BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781033|ref|YP_003065446.1| HemY domain-containing protein
[Candidatus Liberibacter asiaticus str. psy62]
         (492 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781033|ref|YP_003065446.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040710|gb|ACT57506.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 492

 Score = 1014 bits (2622), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/492 (100%), Positives = 492/492 (100%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA
Sbjct: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY
Sbjct: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA
Sbjct: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG
Sbjct: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT
Sbjct: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI
Sbjct: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420
           FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW
Sbjct: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420

Query: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480
           KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH
Sbjct: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480

Query: 481 IRQPDDPGIKEQ 492
           IRQPDDPGIKEQ
Sbjct: 481 IRQPDDPGIKEQ 492


>gi|315122373|ref|YP_004062862.1| HemY domain-containing protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495775|gb|ADR52374.1| HemY domain-containing protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 487

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 290/480 (60%), Positives = 368/480 (76%), Gaps = 4/480 (0%)

Query: 14  VICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLF 73
           +ICSFI +S+YP+D+ +TWGNR+Y+TSPFV+LSI+Y  +F ++L+  +SRFFLSCP+ + 
Sbjct: 1   MICSFIAISYYPDDIYVTWGNRIYQTSPFVMLSIVYILIFTFMLISKISRFFLSCPSTIA 60

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
           ++ HKRNY KGYK L  GL+SI A NIPLARKM SY+S +H FHNE L +LLE QIAL+E
Sbjct: 61  NIFHKRNYAKGYKELSAGLISITAQNIPLARKMFSYLSHRHIFHNESLFHLLEAQIALSE 120

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           ++++IA EK EMMLQIP TREFA+Y+LY E  RIGDL SAQ YA KAL ISP   W  EA
Sbjct: 121 KKHHIAREKFEMMLQIPETREFAIYNLYCEFYRIGDLKSAQCYAKKALKISPYISWGIEA 180

Query: 194 VVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q Y L KEWS+AI FLN+ KK  N + +N ++AILL ARSLENA+KGD++ASY+DA+ 
Sbjct: 181 MLQYYALEKEWSKAIDFLNKNKKYENIETYNHHQAILLTARSLENAEKGDVVASYNDAMV 240

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
            LKLC +SIMASICAAK+LI QNKK KA V+LEKIW++NPHPEIA IYT +LS N   ++
Sbjct: 241 VLKLCKHSIMASICAAKALILQNKKNKAAVVLEKIWEINPHPEIAYIYTIILSNNATERM 300

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
            RAL+LE INK+++ESL+ V+KI+LE G+I QA  KAMLA K  PRK IFLLLA+IE+A+
Sbjct: 301 NRALKLEAINKKNIESLITVAKISLETGNIQQAQTKAMLAAKANPRKGIFLLLAKIERAS 360

Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS 431
           S+N DKILYWTQ AL+  PDPLWISDDGY SS WLPLSP SK LC FEWK+P K PEY +
Sbjct: 361 SNNLDKILYWTQRALYTEPDPLWISDDGYCSSTWLPLSPTSKKLCRFEWKVPAKIPEYTT 420

Query: 432 SEN-INFSLEMAYPADDLQSMLNNGKKNHLPSI-KKVSSFEDSTIHPLDPHIRQPDDPGI 489
           +++ I++     +     ++  N   KN  PSI +     ++  I  LDP IRQPDDPG+
Sbjct: 421 NKDLISYDESETFMTHLQETKRNKNIKNPYPSIHQDYHHPKNRNILSLDPSIRQPDDPGV 480


>gi|150398166|ref|YP_001328633.1| HemY domain-containing protein [Sinorhizobium medicae WSM419]
 gi|150029681|gb|ABR61798.1| HemY domain protein [Sinorhizobium medicae WSM419]
          Length = 551

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 171/540 (31%), Positives = 274/540 (50%), Gaps = 52/540 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  ++  +   F  ++  P ++S+ W  +L   S     S+L     A ++   
Sbjct: 1   MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLLRAASLLISVFAAVLIAVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   S P  +      R  D+GY+AL TGL++  A +  LARKM +      +   E 
Sbjct: 61  LLRTIWSSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDANLARKMTARTRSLISSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E +Y+ A +K E+M   P TRE  +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIHLLEAQTSLIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARHYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            + +P  PW T A +     A++W  AI  L+Q +       KE +R +A+LL AR++E 
Sbjct: 181 AEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAANVLERKEADRKKAVLLTARAMEQ 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D  ++  DA  +LKL D+ + A++ AAK+L  ++  RK   ILEK+WK++PHPEIA
Sbjct: 241 LE-ADPKSARDDARAALKLDDSLVPAALVAAKALFREDNLRKGASILEKMWKLDPHPEIA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y      ++ + +LKRA RLE +   +  SL  V++ ALE   +  A  KA  A +I 
Sbjct: 300 RLYVRARGGDSALDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARTKAEAAARID 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLLLA IE+A++ +  +I YW   AL +  DP W + DG  S  WLP+SP++  L
Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRYWMSQALRSPRDPAWTA-DGVTSPSWLPVSPVTGRL 418

Query: 416 CYFEWKIPTKS-------------------------PEYISSENINFSLEMAYPADDLQS 450
             FEWK P                            P   +      +++ A PA+ +++
Sbjct: 419 DAFEWKAPPARLPAATEEGYLNPDAAIRSLPPVATVPRPATEPETESAVDAAPPAERVEA 478

Query: 451 ------------------MLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI-RQPDDPGIKE 491
                               +  +K  +P++   +  +DS   P DP   R PDDPG++E
Sbjct: 479 EPEKAITVPDPNETVAPPAGDPNRKEPVPAVASPAKGKDSEEAP-DPFFGRPPDDPGVRE 537


>gi|86359488|ref|YP_471380.1| hypothetical protein RHE_CH03907 [Rhizobium etli CFN 42]
 gi|86283590|gb|ABC92653.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 535

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 240/428 (56%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +   + L+   F   +  P D+S+ W  ++Y+T   V +S +   + A ++++ 
Sbjct: 1   MIRLVVFALFVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 61  FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLLAVLLTARAAEK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +  DA+++LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 241 LE-GNPAGARDDALQALKLAVDLVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIG 299

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    S ++T+ +LKRA RLE +   +VESL++V++ AL+     +A +KA  A +I 
Sbjct: 300 QTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARSKAEAAARIE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  +
Sbjct: 360 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 418

Query: 416 CYFEWKIP 423
             FEWK P
Sbjct: 419 DAFEWKAP 426


>gi|222087479|ref|YP_002546016.1| hypothetical protein Arad_4359 [Agrobacterium radiobacter K84]
 gi|221724927|gb|ACM28083.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 532

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 163/447 (36%), Positives = 250/447 (55%), Gaps = 7/447 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  ++  +   F  ++  P D+S+ W  +LY+T   V   IL   + A ++++ 
Sbjct: 1   MIRLLIFALLVLALGYGFSWLADRPGDLSLVWEGQLYQTKLIVAAGILIALVAATMIVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 61  FIRLIWNSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARTRGLIRADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A +K E+M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 121 LINLLEAQAALIEGKHDEARQKFELMANDPETRELGLRGLYLEAKRLGANEAARQYAEKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L+Q+K     + +  NR RA+LL AR+ + 
Sbjct: 181 ADHAPYLPWAAQATLEYRSQAGNWDDAIKLLDQQKVAHVVDKETANRQRAVLLTARANDK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D   +  DA+ +LKL  + + A++ AAK+L  ++K RKA  +LE++WK  PHPEI 
Sbjct: 241 LES-DPAGARDDALAALKLSADFVPAALTAAKALFREDKVRKAASMLEQVWKAKPHPEIG 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    S ++V  +LKRA RLE I   +VE+L++ +K AL+     +A AKA  A +I 
Sbjct: 300 KAYVRARSGDSVTDRLKRAERLEAIRPNNVEALLVTAKAALDAHDFAKARAKAEAAARID 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  FLLLA IE+A +++  ++ +W   AL A  DP W++ DG++S  WLPLSPI+  L
Sbjct: 360 AREGAFLLLADIEEAETNDQGRVRHWMAQALRAPRDPAWVA-DGFVSDKWLPLSPITGRL 418

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMA 442
             FEWK P    E    E    S++ A
Sbjct: 419 DAFEWKAPFGQIEGPLEEGTAVSVDAA 445


>gi|15966835|ref|NP_387188.1| hypothetical protein SMc03234 [Sinorhizobium meliloti 1021]
 gi|307301663|ref|ZP_07581422.1| HemY domain protein [Sinorhizobium meliloti BL225C]
 gi|307316313|ref|ZP_07595757.1| HemY domain protein [Sinorhizobium meliloti AK83]
 gi|15076107|emb|CAC47661.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306898153|gb|EFN28895.1| HemY domain protein [Sinorhizobium meliloti AK83]
 gi|306903361|gb|EFN33950.1| HemY domain protein [Sinorhizobium meliloti BL225C]
          Length = 545

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 149/428 (34%), Positives = 237/428 (55%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  ++  +   F  ++  P ++S+ W  +L   S     SIL     A +++  
Sbjct: 1   MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLMRAASILISLFAAVLIVVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +      R  D+GY+AL TGL++  A +  LARKM +      +   E 
Sbjct: 61  LLRTIWLSPHTVTRYFRSRKRDRGYQALSTGLIAAGAGDANLARKMAARTRNLISSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q AL E +Y+ A +K E M   P TRE  +  LY E+ R+G   +A++YA +A
Sbjct: 121 LIHLLEAQTALIEGKYDDARKKFEAMADDPETRELGLRGLYLEAKRLGANEAARQYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            + +P  PW T A +     A++W  AI  L+Q +        E +R +A+LL AR++E 
Sbjct: 181 SEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAAHVLEKNEADRKKAVLLTARAMER 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D  ++  DA  +LKL D  + A++ AAK+L  +   RK   ILE++WK++PHP+IA
Sbjct: 241 LD-ADPKSARDDAQAALKLDDRLVPAALVAAKALFREENLRKGASILERMWKLDPHPDIA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y      ++ + +LKRA +LE +   +  +L  V++ AL+   +  A  KA  A ++ 
Sbjct: 300 RLYVRARGGDSALDRLKRAKKLESLRSNNAVALATVAEAALDARELALARTKAEAAARLE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLLLA IE+A++ +  +I +W   AL +  DP W + DG  S VWLP+SP+S  L
Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRHWMAQALKSPRDPAWTA-DGVTSPVWLPVSPVSGRL 418

Query: 416 CYFEWKIP 423
             FEWK P
Sbjct: 419 DAFEWKAP 426


>gi|159185310|ref|NP_355592.2| hypothetical protein Atu2656 [Agrobacterium tumefaciens str. C58]
 gi|159140568|gb|AAK88377.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 538

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/428 (35%), Positives = 237/428 (55%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  ++  +   F  ++  P  +SI W  +L   S  V  SI+   + A +L++ 
Sbjct: 1   MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V     + P         R  D+GY+AL TGL++  A N  LARKM +      +   E 
Sbjct: 61  VVNAVWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+ Q  L E +Y+ A  K E M + P TRE  +  LY E+ R G   +AQ+YA  A
Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAYEAAQQYAEDA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            + +P  PW  +A ++      +W  AI  L+Q+K  +     E  R +A+LL A++ E 
Sbjct: 181 AEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D +++  DA  +LKL    + A++ AAKS + ++  RKA  +LE +WK  PHP+IA
Sbjct: 241 LES-DPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIA 299

Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y    S +T + +LKRA RLE +   ++ESL  V++ AL+     +A AKA  A +I 
Sbjct: 300 QLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLL+A IE+A + +  ++ YW   AL A  DP W++ DG +S  WLP+SP++  L
Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVA-DGIVSEKWLPVSPVTGRL 418

Query: 416 CYFEWKIP 423
             FEWK P
Sbjct: 419 DAFEWKAP 426


>gi|325294024|ref|YP_004279888.1| HemY domain protein [Agrobacterium sp. H13-3]
 gi|325061877|gb|ADY65568.1| HemY domain protein [Agrobacterium sp. H13-3]
          Length = 535

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 151/428 (35%), Positives = 237/428 (55%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ +  ++  +   F  ++  P  +SI W  +L   S  V  SI+   + A +L++ 
Sbjct: 1   MTRILTFVLIVLALGFGFSWLADRPGVLSIVWQGQLIEMSLMVAASIVAALVAAVMLVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V     + P         R  D+GY+AL TGL++  A N  LARKM +      +   E 
Sbjct: 61  VVNAIWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+ Q  L E +Y+ A  K E M + P TRE  +  LY E+ R G   +AQ+YA  A
Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAHEAAQQYAEDA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            + +P  PW  +A ++      EW  AI  L+Q+K        E  R +A+LL A++ E 
Sbjct: 181 AEKAPYLPWAAQATLETRCRNGEWDDAIRLLDQQKAAGVIQRGEAERLKAVLLTAKAGEK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D + +  DA ++LKL  + + A++ AAKS + ++  RKA  ++E +WK +PH +IA
Sbjct: 241 LES-DPVGAREDAKQALKLAKSLVPAALIAAKSYLREDNLRKAAAVMEPVWKNDPHSQIA 299

Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           ++Y    S +T + +LKRA RLE +   ++ESL  V++ AL+     +A AKA  A +I 
Sbjct: 300 DLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLL+A IE+A + +  ++ YW   AL A  DP+W++ DG  S  WLP+SP++  L
Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPVWVA-DGVTSEKWLPVSPVTGRL 418

Query: 416 CYFEWKIP 423
             FEWK P
Sbjct: 419 DAFEWKAP 426


>gi|327188880|gb|EGE56072.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
          Length = 580

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 154/412 (37%), Positives = 231/412 (56%), Gaps = 7/412 (1%)

Query: 17  SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76
            F   +  P D+S+ W  ++Y+T   V +S +   + A ++++   R   + P  +    
Sbjct: 62  GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTRYF 121

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R  D+GY+AL TGL++  A N  LARKM +          E L+ LLE Q AL E ++
Sbjct: 122 RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 181

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A  K E M   P TRE  +  LY E+ R+G   +A++YA KA D +P  PW  +A ++
Sbjct: 182 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 241

Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
               A  W  AI  L Q+K        E NR  A+LL AR+ E  + GD   +  DA+++
Sbjct: 242 YRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEKLE-GDPAGARDDALQA 300

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKL 311
           LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPEI   Y    S ++T+ +L
Sbjct: 301 LKLAADLVPAALIAAKALFREGGLRKAASILEQAWKSKPHPEIGQTYVKARSGDSTLDRL 360

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           KRA RLE +   +VESL++V++ AL+     +A AKA  A +I PR+  FLLLA IE+A 
Sbjct: 361 KRAERLEALRPNNVESLLVVAQAALDTQEFAKARAKAEAAARIEPREAAFLLLADIEEAE 420

Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423
           + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  +  FEWK P
Sbjct: 421 TGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRIDAFEWKAP 471


>gi|241206707|ref|YP_002977803.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860597|gb|ACS58264.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 544

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 237/428 (55%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++RL+ +   + L+   F  ++  P D+S+ W  R+Y+T   V  S +   + A ++ + 
Sbjct: 2   LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGRIYQTKLIVAASAIIALVAAVMIAWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 62  FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +   +  DA+++LKL  + I A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 242 LES-NPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    S ++T+ +LKRA RLE     +VESL++V++ AL+     +A AKA  A ++ 
Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  L
Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419

Query: 416 CYFEWKIP 423
             FEWK P
Sbjct: 420 DAFEWKAP 427


>gi|116254227|ref|YP_770065.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258875|emb|CAK09983.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 542

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/428 (36%), Positives = 236/428 (55%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++RL+ +   + L+   F  ++  P D+S+ W  ++Y+T   V  S +   + A ++ + 
Sbjct: 2   LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALVAAVMIAWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 62  FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +   +  DA+++LKL  + I A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 242 LES-NPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    S ++T+ +LKRA RLE     +VESL++V++ AL+     +A AKA  A  + 
Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAAHMQ 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  L
Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419

Query: 416 CYFEWKIP 423
             FEWK P
Sbjct: 420 DAFEWKAP 427


>gi|227823721|ref|YP_002827694.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium
           fredii NGR234]
 gi|227342723|gb|ACP26941.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium
           fredii NGR234]
          Length = 541

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/448 (36%), Positives = 248/448 (55%), Gaps = 13/448 (2%)

Query: 4   LIRYFFVISLVIC---SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++R  F I LV+     F  ++  P ++S+ W  +L   S     +IL   LFA IL+ A
Sbjct: 1   MVRILFFILLVLALALGFAWLADRPGELSLIWQGQLIEMSLMRAATIL-ISLFAAILIVA 59

Query: 61  -VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            + R     P  +      R  D+GY+AL TGL++  A +  LARKM        +   E
Sbjct: 60  WLIRTLWLSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDAALARKMAGRTRGLISADQE 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L++LLE Q AL E +Y+ A +K E+M   P TRE  +  LY E+ R+G   +A++YA +
Sbjct: 120 PLIHLLEAQTALIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARQYAER 179

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLE 235
           A + +P   W T A + Q   A +W  AI  L+Q +     + KE NR +A+LL AR+  
Sbjct: 180 AAEKAPHLSWATLATLDQRSQAGQWDEAIRLLDQSRTANVLDKKEANRKKAVLLTARATG 239

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             +  D  A+  DA+ +LKL D  + A++ AAK+L  ++  RK   +LEK+WK +PHPE+
Sbjct: 240 KLE-ADPKAARDDALAALKLDDRLVPAALTAAKALFREDNLRKGASVLEKVWKQDPHPEL 298

Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A +Y      ++ V +LKRA RLE +   +  SL  V++ ALE   +  A +KA  A ++
Sbjct: 299 ARLYVRARGGDSAVDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARSKAEAAARL 358

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           AP + IFLL+A IE+A++ +  +I +W   AL +  DP W + DG  S  WLP+SP+S  
Sbjct: 359 APSESIFLLIADIEEADTGDEGRIRHWMAQALRSPRDPAWTA-DGVTSPTWLPVSPVSGR 417

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMA 442
           L  FEWK P  SP   ++E    S++ A
Sbjct: 418 LDAFEWKEPP-SPLAGTTEEGRVSVDEA 444


>gi|190893756|ref|YP_001980298.1| hypothetical protein [Rhizobium etli CIAT 652]
 gi|190699035|gb|ACE93120.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
          Length = 535

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/412 (36%), Positives = 230/412 (55%), Gaps = 7/412 (1%)

Query: 17  SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76
            F   +  P D+S+ W  ++Y+T   V +S +   + A ++ +   R   + P  +    
Sbjct: 17  GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIGWWFVRLIWTSPHSVTRYF 76

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R  D+GY+AL TGL++  A N  LARKM +          E L+ LLE Q AL E ++
Sbjct: 77  RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 136

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A  K E M   P TRE  +  LY E+ R+G   +A++YA KA D +P  PW  +A ++
Sbjct: 137 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 196

Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
               A  W  AI  L Q+K        E NR  A+LL AR+ E  + G+   +  DA+++
Sbjct: 197 YRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEKLE-GNPAGARDDALQA 255

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKL 311
           LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPE+   Y    S ++T+ +L
Sbjct: 256 LKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEVGQTYVRARSGDSTLDRL 315

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           KRA RLE +   +VESL++V++ AL+     +A AKA  A +I PR+  FLLLA IE+A 
Sbjct: 316 KRAERLEALRPNNVESLLVVAQAALDAQEFAKARAKAEAAARIEPREAAFLLLADIEEAE 375

Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423
           + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  +  FEWK P
Sbjct: 376 TGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRIDAFEWKAP 426


>gi|209551274|ref|YP_002283191.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209537030|gb|ACI56965.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 536

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 238/428 (55%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++RL+ +   + L+   F  ++  P D+S+ W  ++Y+T   V  S +   + A ++ + 
Sbjct: 2   LIRLVAFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALIAAVMIAWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 62  FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +Y+ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 122 LISLLEAQAALIEGRYDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        + NR  A+LL AR+ E 
Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKADANRLHAVLLTARAGEK 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +  DA ++LKL  + I A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 242 LE-GNPAGARDDAQQALKLAADFIPAALVAAKALFREGGVRKAASILEQAWKSAPHPEIG 300

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    S ++T+ +LKRA RLE +   +VESL++V++ AL+     +A AKA  A ++ 
Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGLRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  L
Sbjct: 361 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419

Query: 416 CYFEWKIP 423
             FEWK P
Sbjct: 420 DAFEWKAP 427


>gi|163757398|ref|ZP_02164487.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43]
 gi|162284900|gb|EDQ35182.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43]
          Length = 631

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 234/437 (53%), Gaps = 13/437 (2%)

Query: 4   LIRYFFVISLVIC---SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +IR  F ++LV+     F  ++  P D+SI W +R    S    ++++   + A ++ + 
Sbjct: 2   MIRLLFFVALVLVLGFGFAWLADRPGDLSIVWQDRRIEMSLMTAVTVMVSLVAAVMITWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P ++         D+GY+AL TGL++  A +   ARKM+       +   E 
Sbjct: 62  LIRTIWLSPRLVSRYFRANKRDRGYQALSTGLLAAGAGDAMTARKMNKRSRGLLSADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+VQ AL E + + A ++ E + + P TR   +  LY E+ R G   +A  YA KA
Sbjct: 122 LIHLLDVQTALIEGRNDDARKQFEALAEDPETRLLGLRGLYLEAQRQGATEAAHHYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            +++P  PW   A +       +W  A+  L+ +++     A E +R +A+LL AR+ + 
Sbjct: 182 AELAPHLPWAGAAALSFRTQEGKWDEALRLLDTQRQAGTLEALEADRKKAVLLTARARDR 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D + S  DA+ +LK+      A++ A K+L+  +  RKA  ILE  WKVNPHPEIA
Sbjct: 242 LD-ADPLRSRDDALAALKVAPGFAPAAVIATKALLRNDNLRKAARILESAWKVNPHPEIA 300

Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y    + +    +LKRA RLE++   + ++   V++ ALE    D A  KA  + ++ 
Sbjct: 301 DAYVRARIGDTAADRLKRAERLEKLKPLNAQAYDTVARAALEARRFDLARQKAEASARLL 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + I+LLLA IE+A + +  ++ +W   A+ A  DP W + DGY+S  W P+SP++  L
Sbjct: 361 PCEGIYLLLADIEEAETGDEGRVRHWLSQAVRAPRDPAWTA-DGYVSETWEPVSPVTGKL 419

Query: 416 CYFEWKIPTK---SPEY 429
             FEWK+P +    P Y
Sbjct: 420 DAFEWKVPVEQLSGPRY 436


>gi|222150058|ref|YP_002551015.1| hypothetical protein Avi_4148 [Agrobacterium vitis S4]
 gi|221737040|gb|ACM38003.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 526

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/432 (34%), Positives = 241/432 (55%), Gaps = 15/432 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS----PFVILSILYFFLFAWI 56
           M+R+I Y  ++  +   F  ++  P ++ I W  +L   S      +I++I+   +  W 
Sbjct: 1   MIRIIVYILIVLALGFGFSWLADRPGELQIVWQGQLIEMSLTAAATMIVAIVAVVMIGWW 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           L+    R   + P  +      R  D+GY+A+ TGL++  A N  LAR+M +        
Sbjct: 61  LV----RTLWTSPHSMRRYFRARKRDRGYQAISTGLIAAGAGNAALARRMSARARGLVRA 116

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
             E L+ +LE Q AL E +++ A    E M+  P TRE  +  LY E+ R+G   +A++Y
Sbjct: 117 DQEPLIMVLEAQAALIEGKHDDARRIYEQMVADPETRELGLRGLYVEATRLGAHEAARQY 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232
           A KA + +P  PW  +A ++       W+ AI  L+Q++        E +R +A+LL A+
Sbjct: 177 AEKAAEDAPYLPWAAKAALEYRCQTSAWNEAIHLLDQQRVAGVLARAEADRLKAVLLTAK 236

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +++  D GD  A+  +A+ +LKL  + + AS+ AA++L+ ++  RKA  +LE  WK+ PH
Sbjct: 237 AMDQLD-GDPAAARDNAMNALKLAKDLVPASVTAARALLREDNLRKAGSVLETAWKLAPH 295

Query: 293 PEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           P+IA++Y      +  V +LKRA RLE++   +V SL++V+++ALE     +A AKA  A
Sbjct: 296 PDIASLYVRARGGDGAVDRLKRAERLEQVKPNNVYSLLVVAEMALEARDFTKARAKAEAA 355

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
            ++   + +FLLLA IE A + +  +I YW   AL A  DP W++ DG +S  WLP SP+
Sbjct: 356 ARMQASERVFLLLADIEDAETGDQARIRYWMAQALKAPRDPSWVA-DGQVSEKWLPYSPV 414

Query: 412 SKTLCYFEWKIP 423
           S  L  FEWKIP
Sbjct: 415 SGRLDAFEWKIP 426


>gi|90421076|ref|ZP_01228979.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334711|gb|EAS48488.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 541

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 221/430 (51%), Gaps = 8/430 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  V+      F  ++  P  V+  W  +   TS  V L  L   +FA +L+  
Sbjct: 1   MLRILAFLLVVLAAGIGFAWLADNPGSVTFVWQGQQVGTSLMVFLIGLGVLIFAVLLVVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R F   P  + +       D+GYKAL +G+++  A +  LAR+M     +      E 
Sbjct: 61  LVRAFFKTPGAIGNWWSTSRRDRGYKALSSGIIAAGAGDAVLARRMTKRSDKLLGTRREP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+  L+ Q A+ E  +  A    E M + P TR  A+  L+ E+ R+GD ++A+ YA +A
Sbjct: 121 LIRFLDAQTAMIEGDHARARSAFEQMERDPETRLLALRGLFLEAERVGDESAARHYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
           + I+P  PW   AV++   LA +W  A+  L+ +K     +  E  R RA+LL A+++  
Sbjct: 181 VRIAPHVPWAGGAVLESKCLAGDWDGALAILDAQKNTRLVDRDESKRMRAVLLTAKAMTL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           +++ D   +    +E+ KL  +   A++ AA++L      R+   +LE  W   PHP+IA
Sbjct: 241 SER-DPAGAKTAGLEAQKLAPDLPPAALVAAEALFRLGDLRRGSKVLETSWISQPHPDIA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y H    ++   +LKRA +L  ++    E+ + +++ AL+ G  D A   AM A    
Sbjct: 300 EAYVHARPGDSPEDRLKRARKLHGLHS-GAEAEMSLARAALDAGEFDLARKSAMAAADAE 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A +    ++  W   A+ A  DP W + DG +S  W P+SP++  L
Sbjct: 359 PRESTYLLLADIEEAQTGEVGRVREWLGRAIRAPRDPAWTA-DGVVSRNWAPISPVTGRL 417

Query: 416 CYFEWKIPTK 425
             FEWK+P +
Sbjct: 418 DAFEWKVPVE 427


>gi|218672801|ref|ZP_03522470.1| hypothetical protein RetlG_14767 [Rhizobium etli GR56]
          Length = 382

 Score =  214 bits (545), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 201/367 (54%), Gaps = 6/367 (1%)

Query: 17  SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76
            F   +  P D+S+ W  ++Y+T   V +S +   + A ++++   R   + P  +    
Sbjct: 17  GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTRYF 76

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R  D+GY+AL TGL++  A N  LARKM +          E L+ LLE Q AL E ++
Sbjct: 77  RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 136

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A  K E M   P TRE  +  LY E+ R+G   +A++YA KA D +P  PW  +A ++
Sbjct: 137 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 196

Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
               A  W  AI  L Q+K        E NR  A+LL AR+ E  + G+   +  DA+++
Sbjct: 197 YRSQAGRWDDAIRLLEQQKAARVVEKTEANRLHAVLLTARAGEKLE-GNPAGARDDALQA 255

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKL 311
           LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPEI   Y    S ++T+ +L
Sbjct: 256 LKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIGQTYVRARSGDSTLDRL 315

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           KRA RLE +   +VESL++V++ AL+     +A  KA  A +I PR+  FLLLA IE+A 
Sbjct: 316 KRAERLEALRPNNVESLLVVAQAALDAQEFAKARTKAEAAARIEPREAAFLLLADIEEAE 375

Query: 372 SHNTDKI 378
           + +  ++
Sbjct: 376 TGDQGRV 382


>gi|218662368|ref|ZP_03518298.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
          Length = 428

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/311 (38%), Positives = 181/311 (58%), Gaps = 7/311 (2%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            E L+    +++ L E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA
Sbjct: 11  QEPLINCSRLRVRLMEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYA 70

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARS 233
            KA D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+
Sbjct: 71  EKAADNAPYLPWAAQATLEYRSQAGNWDDAIRLLEQQKAARVVEKTEANRLHAVLLTARA 130

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            E  + G+   +  DA+++LKL    + A++ AAK+L  +N  RKA  ILE+ WK  PHP
Sbjct: 131 GERLE-GNPAGARDDALQALKLAAGLVPAALIAAKALFRENGLRKAASILEQAWKSAPHP 189

Query: 294 EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           EI   Y    S ++T+ +LKRA RLE +   +VESL++V++ AL+     +A AKA  A 
Sbjct: 190 EIGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARAKAEAAA 249

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
           +I PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++
Sbjct: 250 RIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVT 308

Query: 413 KTLCYFEWKIP 423
             +  FEWK P
Sbjct: 309 GRIDAFEWKAP 319


>gi|153008313|ref|YP_001369528.1| HemY domain-containing protein [Ochrobactrum anthropi ATCC 49188]
 gi|151560201|gb|ABS13699.1| HemY domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 553

 Score =  200 bits (508), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 226/428 (52%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ YF V++ +   F  ++  P ++ +T+    Y       ++ +   + A ++L+ 
Sbjct: 1   MLRVLFYFVVVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAMLILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L      R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M+  P TR   +  LY E+ R+G L++A+ YA +A
Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGALDAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + A++ Q     +W  A+  ++ +K+   ++K+   + RA LL A+++  
Sbjct: 181 ASQAPQLEWASSAMMGQLCAEGDWDAALKLVDARKQALAHSKDVVKKERAALLTAKAMAV 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D   +   A+E+ KL  + + A++ AA++L S    RK   ILE  WK  PHP+IA
Sbjct: 241 ADV-DHAQAKALALEANKLTPDLVPAAVVAARALFSDGDMRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ +
Sbjct: 300 STYVYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+S  W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSPVSPVTGRL 418

Query: 416 CYFEWKIP 423
             FEWK+P
Sbjct: 419 NSFEWKVP 426


>gi|13473574|ref|NP_105142.1| hypothetical protein mll4218 [Mesorhizobium loti MAFF303099]
 gi|14024324|dbj|BAB50928.1| mll4218 [Mesorhizobium loti MAFF303099]
          Length = 531

 Score =  199 bits (507), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 260/523 (49%), Gaps = 42/523 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  V+  +   F  ++  P D+ +T+    Y+ S  V    +   + A ++L+ 
Sbjct: 1   MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   + P  +      R  D+GY+AL TG+++  A +  LARK     ++      E 
Sbjct: 61  LIRSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E  +  A +K E ML  P  R   +  LY E+ R+GD N+A+ YA +A
Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236
             ++P   W  E+ +++     +W  A+  ++ +K   +      NR RA+LL A++   
Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D  A+   A+E+ KL  +   A++ AA +L  QN  RK   ILE  W+  PHPEIA
Sbjct: 241 ADS-DPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +YTH    + V  +L RA +L+E+ K   ES + V++ AL+      A ++A  A+++ 
Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  +LLLA IE+A + +  K+      A+ A  DP W++ DG +S  W P+SP++  L
Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418

Query: 416 CYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST- 473
             FEW+ P +   + I S +   ++ +      ++++     +  + +I+ V++  ++T 
Sbjct: 419 DAFEWRAPMERLGQLIDSRDEGTTVPV------IEALAKPASEKPIDAIEPVAAGSETTG 472

Query: 474 ---------------------------IHPLDPHIRQPDDPGI 489
                                      + P +   R PDDPG+
Sbjct: 473 KGTDRSEDQVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGV 515


>gi|304392696|ref|ZP_07374636.1| HemY domain-containing protein [Ahrensia sp. R2A130]
 gi|303295326|gb|EFL89686.1| HemY domain-containing protein [Ahrensia sp. R2A130]
          Length = 674

 Score =  197 bits (500), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 218/432 (50%), Gaps = 13/432 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW----GNRLYRTSPFVILSILYFFLFAWI 56
           MLRL  +F ++  +   F   +  P  +++ W    G         V + +L   LFA I
Sbjct: 1   MLRLAVFFLILFAIAAGFAWFADNPGTITLQWPWLNGGEPLAVDLLVAIVVLAVVLFAAI 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           +L+++    L+ P         R  DKGY+AL  GL++  A N PLAR++    S+    
Sbjct: 61  VLWSIIAAILTSPKTFGRWREGRRRDKGYEALSRGLVAANAGNAPLARRLTKECSKH--L 118

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            +E LV LL+ Q AL E  ++ A      ML+   TR   +  LY E+ + G+  +A  +
Sbjct: 119 DDEPLVALLDAQTALLEDDHDCARRCYTTMLEKDETRLLGLRGLYLEAEKEGEGEAAGHF 178

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232
           A +A+  +P  PW T+A+++     K W  A+  L+  +     +   +N  +A +L A 
Sbjct: 179 AREAVKANPGTPWATQAMLRSQTATKNWEEALKTLDLNRSAGVYDKDAYNGRKAAILTAL 238

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +++  D     A  H A+ + KL      A++ AA+  +  N  RKA  +LE  WK  PH
Sbjct: 239 AMDEEDASPEKARSH-ALAAHKLAPTLAPAAVVAARMSVRLNDMRKAAKVLETSWKAEPH 297

Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           PEIA+ Y HL + ++V  +LKRA  L+     S++  + ++++A++ G  + A      A
Sbjct: 298 PEIADAYIHLRNGDSVLDRLKRAQTLDGKRSNSIDGQLAIAQVAIDAGEYETARDALEAA 357

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
            +I P +   LL+A +E+A + +  ++  W   A+HA  D  W++ DG  +  W+P SP+
Sbjct: 358 FRITPTERACLLMADLEEAQNEDMGRVREWLSRAVHAPRDKAWVA-DGVAAEEWMPASPV 416

Query: 412 SKTLCYFEWKIP 423
           +  +  FEWK P
Sbjct: 417 TGEINAFEWKQP 428


>gi|110635528|ref|YP_675736.1| HemY-like [Mesorhizobium sp. BNC1]
 gi|110286512|gb|ABG64571.1| HemY-like protein [Chelativorans sp. BNC1]
          Length = 533

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 236/428 (55%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ +  ++ L+   F  ++  P ++++T+G   Y+ +  +   +L   + A ++L+ 
Sbjct: 1   MFRILLFLVIVMLLGLGFAWLADRPGELAVTFGGYQYQVTLMMAAVLLVAAIAAVMILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   + P  +      R  D+GY+AL TGL++  A +  LAR+M    ++  +   E 
Sbjct: 61  IVRGIWTSPYTVRRYFRARRRDRGYQALSTGLIAAGAGDAGLARRMGQQAAKLISSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+ Q A+ E  +  A  K + M   P TR   +  LY E+ R G+  +A+ YA +A
Sbjct: 121 LIHLLDAQAAMLEGNHEAARAKFQAMADDPETRLLGLRGLYLEAERHGEREAARHYADEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLEN 236
             I+P   W  +A ++      +W  A+  L+++K ++KE      R RA+LL A+++  
Sbjct: 181 TKIAPQLGWAADATLEAKADEGDWQGALALLDKQKPSSKEERAALARKRAVLLTAQAMAQ 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +  A+   A+E+ +L  + + A++ AA++L  Q+  R+   +LE +W  +PHPE+A
Sbjct: 241 LNM-NPAAAKTAALEAHRLQPDFVPAAVTAARALFRQDDLRRGAKVLEAVWAKSPHPEVA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +IY H    ++T  +L RA +L  +   + ES++ V++ AL+ G   +A   A  A+++ 
Sbjct: 300 DIYVHARPGDSTHDRLTRAKKLRRLKPNNAESVLAVARAALDAGEYGEAREAAEAAVRLD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A   +  ++ YW   A+ A  DP W++ DGY++  W P SP++  L
Sbjct: 360 PREGAFLLLADIEEAERGDQGRVRYWLAKAVRAPRDPAWVA-DGYVAERWAPASPVTGRL 418

Query: 416 CYFEWKIP 423
             FEW+ P
Sbjct: 419 DAFEWRAP 426


>gi|254717951|ref|ZP_05179762.1| hypothetical protein Bru83_00095 [Brucella sp. 83/13]
 gi|306838961|ref|ZP_07471785.1| HemY domain protein [Brucella sp. NF 2653]
 gi|306405964|gb|EFM62219.1| HemY domain protein [Brucella sp. NF 2653]
          Length = 537

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 223/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H       +E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA  Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIAATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|265982894|ref|ZP_06095629.1| HemY domain-containing protein [Brucella sp. 83/13]
 gi|264661486|gb|EEZ31747.1| HemY domain-containing protein [Brucella sp. 83/13]
          Length = 539

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 223/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H       +E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 243 LD------THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFP 296

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA  Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 297 HPDIAATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 416 VTGRLNSFEWKVP 428


>gi|240851346|ref|YP_002972749.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup]
 gi|240268469|gb|ACS52057.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup]
          Length = 519

 Score =  194 bits (492), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 255/518 (49%), Gaps = 38/518 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++  +F  V+++     +T+ +  +  S   +LS+L       +LL+ 
Sbjct: 1   MIRVFIYTFVVCILGLAFAWVANHNGIFVLTFLHFRFSASLLTVLSVLILLFVTLVLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +  FF S P+ L + L+KR+  +GY+AL  G+++  A +  +A+KM + V++      E 
Sbjct: 61  LLSFFFSLPSALSNYLYKRHKKRGYEALSKGILATFAGDSMVAQKMEAQVAKYLAGKQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV LL+ Q    +     A    E M +  +T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LVKLLQAQTLSLQNNSVRAIGLYEGMRKEDSTKLVGLYGLFCEAMKSKAYEAAQQYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233
           L +SP   W  +AV+ +     +W +A+    + +K          E    + +LL  ++
Sbjct: 181 LTLSPALLWAHQAVLDRLSTEGKWDKALAIFERAQKALPRSVRATPERQHIQVLLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L   D    + +    +++ KL  + +   + AA  L   N+ RKA+ ++   W+ +PHP
Sbjct: 241 LSLFDT-HPVQAREAILKAHKLAPDFVPIIVIAADILYKLNETRKADKMIIAAWQKDPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++A +Y     E  +G+LKRA  L   NK++ ES  +++K AL+ G    A  +A  A++
Sbjct: 300 DLAALYLE-REEGAIGRLKRARTLASYNKDAFESAFLIAKAALDAGETAIAREQAKKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             PR+ ++LLLA IE+A  +N   +  W   AL A  DP+W+  DG + S W  +SPIS 
Sbjct: 359 YHPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMC-DGSIFSSWSAVSPISG 417

Query: 414 TLCYFEWKIPTKSP----------------EYISSENINFS---LEMAYPADDLQSMLNN 454
            L  FEWK P   P                EY++ ++       LE   P DD  S+L+N
Sbjct: 418 RLGGFEWKAPPCMPSLTLEADNIVPKKQDKEYVTGKSDGVEDKKLEKLTPIDD--SLLHN 475

Query: 455 GKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKEQ 492
            +      ++K    E         H+   DDPG+K +
Sbjct: 476 VQ------VEKQDIKEQDVKMFSQTHL-NVDDPGVKTE 506


>gi|260464236|ref|ZP_05812429.1| HemY domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259030039|gb|EEW31322.1| HemY domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 533

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 224/428 (52%), Gaps = 7/428 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  V+  +   F  ++  P D+ IT+    Y+ S  V    +   + A ++ + 
Sbjct: 1   MIRLLAFLVVVFALGLGFAWLADRPGDMVITFNGYQYQVSLMVAAVAVVAVVAAVMIAWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +   + P  +      R  D+GY+AL TG+++  A +  LARK     ++      E 
Sbjct: 61  LVKSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E  +  A +K E ML  P  R   +  LY E+  +GD N+A+ YA +A
Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAESLGDRNAARHYAGRA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236
             ++P   W  E+ +++     +W  A+  ++ +K   +      NR RA+LL A++   
Sbjct: 181 AVMAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D  A+   A+E+ KL  +   A++ AA +L  QN  RK   ILE  WK  PHPE+A
Sbjct: 241 ADS-DPNAARTAALEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILETAWKAEPHPEVA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +YTH    + V  +L RA +L+E+ K   ES + V++ AL+      A  +A  A+++ 
Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAMDFSTARREAEAAIRMD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  +LLLA IE+A + +  K+      A+ A  DP W++ DG +S  W P+SP++  L
Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418

Query: 416 CYFEWKIP 423
             FEW+ P
Sbjct: 419 DAFEWRAP 426


>gi|307942605|ref|ZP_07657953.1| HemY domain-containing protein [Roseibium sp. TrichSKD4]
 gi|307774244|gb|EFO33457.1| HemY domain-containing protein [Roseibium sp. TrichSKD4]
          Length = 656

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 218/430 (50%), Gaps = 13/430 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +F ++  V      ++  P  VSI+W   ++   P V+  +L   L A++ +  
Sbjct: 1   MIRVLVFFALLFAVALGAARMADLPGVVSISWDGYVWEQPPVVVAVVLASLLAAFLFVVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R  L+ P +      +R  DKGY++L  GL+++   N  LAR+ H+  + +  F +E 
Sbjct: 61  VIRVILNSPKIATRFFRQRRKDKGYQSLSQGLIALGTGNAKLARR-HALDADKF-FSDEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q A    +   A ++ E ML  P TR   ++ L+ E+ + G+  +A+ YA +A
Sbjct: 119 ATKLLLAQTAQLAGKDEEARKRFEDMLADPQTRSLGLHGLFIEAEKQGEPAAARHYAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLI--ARSL 234
           +   P   W   AV+    +A +W +A+  L +    K  + K + R RA++L   AR L
Sbjct: 179 VKAVPGLEWAGNAVLGYQAVASDWEQALQSLERNYSAKLLDKKSYRRQRAVILTAHARQL 238

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           E+ D      ++ +A E+  L  N + A+  AA+    +   RKA  +LE  W++ PHPE
Sbjct: 239 EDQDPDK---AFANAKEAHGLAQNLVPAATIAARLATRRGDIRKASKMLETTWRLAPHPE 295

Query: 295 IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A+ Y H+ S ++ + +LKR   L      +    + +++ A+E    D+A  +    ++
Sbjct: 296 LADAYAHVRSGDSAIDRLKRVKALAGQRTNTAVGALAIARAAMEAREFDEAREQMKKVLR 355

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             P +  F+++A++E+    N  ++  W   A++A  D  WI+ DG + + W  +SP++ 
Sbjct: 356 SEPTRGAFMMMAEVEELEHGNRGRMREWLAKAVNAPLDKAWIA-DGVVQAEWAAVSPVTG 414

Query: 414 TLCYFEWKIP 423
            L  FEW  P
Sbjct: 415 QLDAFEWATP 424


>gi|114705598|ref|ZP_01438501.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506]
 gi|114538444|gb|EAU41565.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506]
          Length = 522

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 221/435 (50%), Gaps = 17/435 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-----W 55
           M  ++ +F +I  +   F  ++  P  V+  W  +    S  + L+     + A     W
Sbjct: 1   MWGILTFFILILALYLGFGWLADNPGSVTFVWQEQTVEFSMILFLAAAAAVIVASVLVVW 60

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115
           +    V++ F   P ++      R + KG+  L  G+++  A N  LAR+M      +  
Sbjct: 61  L----VAKLF-QAPGLISSWNSSRRHSKGHNYLSRGVLAAGAGNATLARQMIKKSEGRIG 115

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
             +  ++  L+ Q AL E  +  A      M + P T+  A+  LY E+ R+GD ++ + 
Sbjct: 116 KDDRAILGFLDAQTALIEGDHQRAVAIFRDMEEDPNTKLLALRGLYLEAKRVGDESAQEY 175

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIA 231
           YA +AL I+P+ PW  EAV+++   +++W  A+  L  ++       K+  R RAILL A
Sbjct: 176 YAERALRIAPNLPWAAEAVLERKSSSRDWDGALRVLEAQRSIDMLGDKDAKRIRAILLTA 235

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ + AD  D  A+   A  + K+  + + A++ AA +    N  R+A   LE  W   P
Sbjct: 236 KAKDQAD-ADPKAARSSARSAQKIAPDFVPAALVAAAAATRLNDSRRATRYLETTWVNAP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HPEIA+ Y H  + ++   +L+RA +L+ + ++  ES + V++ AL+ G  D A + A+ 
Sbjct: 295 HPEIADAYVHAKAGDSAKDRLRRAQKLKGLYEKHPESDIAVARAALDAGEHDLARSSALD 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
           A +  P + ++LLLA IE+  S    ++  W   A+ A  DP+W++ DG +   W P+SP
Sbjct: 355 AAQKRPTESVYLLLADIEEEQSGEVGRVREWLAKAITAPRDPVWMA-DGVILDEWQPVSP 413

Query: 411 ISKTLCYFEWKIPTK 425
           +++ L   EWK P +
Sbjct: 414 VTRKLGVVEWKSPVE 428


>gi|161619801|ref|YP_001593688.1| HemY domain-containing protein [Brucella canis ATCC 23365]
 gi|161336612|gb|ABX62917.1| HemY domain protein [Brucella canis ATCC 23365]
          Length = 523

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 227/433 (52%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +Q + + E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSYQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|260567627|ref|ZP_05838097.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|260157145|gb|EEW92225.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40]
          Length = 523

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 226/433 (52%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +Q +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|319780790|ref|YP_004140266.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166678|gb|ADV10216.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 534

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 257/520 (49%), Gaps = 33/520 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  V+  +   F  ++  P D+ +T+    Y+ S  V    +   + A ++L+ 
Sbjct: 1   MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAVVAVVAAVMILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +   + P  +      R  D+GY+AL TG+++  A +  LARK     ++      E 
Sbjct: 61  LLKALWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E  +  A +K E ML  P  R   +  LY E+ R+GD N+A+ YA +A
Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236
             ++P   W  E+ +++     +W  A+  ++ +K   +      NR RA+LL A++   
Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKATRQIERDAANRRRAVLLTAKAQAL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D  A+   AIE+ KL  +   A++ AA +L  QN  RK   ILE  WK  PHPEIA
Sbjct: 241 ADS-DPAAARTAAIEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILEAAWKAEPHPEIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +YTH    + V  +L RA +L+E+ K   ES + V++ AL+      A  +A  A+++ 
Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFATARREAEAAIRMD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  +LLLA IE+A + +  K+      A+ A  DP W++ DG +S  W P+SPI+  L
Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSRAVRAPRDPAWVA-DGVVSERWAPVSPITGRL 418

Query: 416 CYFEWKIPTKS-PEYISSENINFSL------EMAYPA---------DDLQSMLNNGKK-- 457
             FEW+ P +   + I S +   +        +A P          DD     + GK+  
Sbjct: 419 DAFEWRAPMERLGQLIDSHDDAPAGAAPVIEALAKPTSEKRPIEVIDDAGGETSAGKQAE 478

Query: 458 ----NHLPSIKKVS----SFEDSTIHPLDPHIRQPDDPGI 489
               +H+  I   +      +   + P +   R PDDPG+
Sbjct: 479 SREEDHVRPITAAAFAAVPSDAEGVEPAEELARLPDDPGV 518


>gi|256370285|ref|YP_003107796.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915]
 gi|256000448|gb|ACU48847.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915]
          Length = 523

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 226/433 (52%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P ML   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYMLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|328542000|ref|YP_004302109.1| HemY N-terminal domain protein [polymorphum gilvum SL003B-26A1]
 gi|326411750|gb|ADZ68813.1| HemY N-terminal domain protein [Polymorphum gilvum SL003B-26A1]
          Length = 597

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 217/444 (48%), Gaps = 9/444 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R + +F V+  V   F  ++  P  VS++W   ++   P V   ++   L   +L F 
Sbjct: 1   MIRALVFFAVLFAVAFGFAWMADLPGVVSVSWQGYVWEQPPVVAAVLIGLALVLVLLAFW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L  P +    L +R  DKGY+AL  GL+++   N   AR+      +      E 
Sbjct: 61  LVGAILRSPRIARRFLRRRRRDKGYEALSHGLIALGTGNAKRARRYGQDADK--LLRGES 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q A    Q++ A ++ E ML+ P TR   ++ L+ E+ R  +  +A+ YA +A
Sbjct: 119 AARLLLAQAAQMSGQHDEARQRFEAMLKDPETRALGLHGLFIEAERQNEPIAARHYAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236
               P   W   AV+    +A +W  AI  L +    +  + K + R+RA+LL AR+LE 
Sbjct: 179 ARAVPGLDWAGRAVLGYQAVAGDWEAAIATLERNYAARLVDKKTYRRHRAVLLAARALEL 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D GD   +   A E+  L  + + A++ AA+    +   RKA  I+E  W+++PHP++A
Sbjct: 239 ED-GDPETALTLAKEAHGLALDLVPAAVVAARLATRKGDVRKAAKIVEATWRLSPHPDLA 297

Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H  + +  + +L R   L      + E  + V++ ALE     +A  +    ++  
Sbjct: 298 DAYAHARIGDAALDRLARVRTLAAQRAHTAEGALAVARAALEAREFGEAREQLKRVLRSE 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P +  F+L+A++E+A   +  ++  W   A+ A  D  W++ DG +   W P+SP++  L
Sbjct: 358 PTRGAFVLMAELEEAEHGDRGRVREWLARAVRAPLDKAWVA-DGVVREAWAPVSPVTGRL 416

Query: 416 CYFEWKIPTKSPEYISSENINFSL 439
             FEW  PT  PE    E ++ +L
Sbjct: 417 DAFEWTTPTGLPETPLVEALDDAL 440


>gi|118592001|ref|ZP_01549395.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614]
 gi|118435297|gb|EAV41944.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614]
          Length = 669

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 216/437 (49%), Gaps = 18/437 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW---------GNRLYRTSPFVILSILYFF 51
           M+R++ +F ++  V   F  ++  P  + I+W         G  ++  SP ++      F
Sbjct: 1   MIRVLFFFALLFAVALGFAWMADLPGTIQISWPVYENGQQVGTDIWEQSPVIVGLAAAVF 60

Query: 52  LFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111
           L  ++++    R  L  P +      +R  DKGY AL  GL+++   N  LAR+    + 
Sbjct: 61  LAVFLVIVWAIRVVLKSPQIASRFFRRRRKDKGYNALSQGLIALGTGNAKLARRY--ALD 118

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 +E    LL  Q A    + + A ++ E ML+ PAT+   ++ L+ E+ R  +  
Sbjct: 119 ADKLLDDEPAAKLLLAQTAQLAGKDDEARQRFEAMLEDPATKALGLHGLFIEAERHKEPV 178

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAI 227
           +A+ YA +A   SP   W  +AV+    +A  W  A+  L +    K  + K + R RA+
Sbjct: 179 AARHYAEEAAKTSPGLEWAGKAVLGYQAVAHHWDEALKTLERNYAAKMLDKKTYRRQRAV 238

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +L A +++  D G+   +Y  A E+  L  + + A++  ++    +   RKA  +LE  W
Sbjct: 239 ILTALAMKLED-GEPERAYSLAKEAHGLALDLVPAAVLTSRLATRRGDIRKASKVLEATW 297

Query: 288 KVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           ++ PHP++A  Y H+   ++ V +LKR   L      + E  + +++ A+E    ++A  
Sbjct: 298 RLFPHPDLAETYAHVRTGDSAVDRLKRVKSLSAQRANTPEGALAIARAAMEAREFEEARQ 357

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406
           +    ++  P ++ FLL+A++E+A + +  +   W   A+ A  D +W++ DG +S+ W 
Sbjct: 358 QLKKVLQSEPTRQAFLLMAEVEEAENGDRGRTRDWLARAVSAPLDKVWMA-DGIISAEWQ 416

Query: 407 PLSPISKTLCYFEWKIP 423
           P+SP++  L  F+W  P
Sbjct: 417 PVSPVTGKLDAFQWATP 433


>gi|225853321|ref|YP_002733554.1| HemY domain-containing protein [Brucella melitensis ATCC 23457]
 gi|256045493|ref|ZP_05448376.1| hypothetical protein Bmelb1R_13396 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112219|ref|ZP_05453140.1| hypothetical protein Bmelb3E_05957 [Brucella melitensis bv. 3 str.
           Ether]
 gi|260562802|ref|ZP_05833288.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|225641686|gb|ACO01600.1| HemY domain protein [Brucella melitensis ATCC 23457]
 gi|260152818|gb|EEW87910.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|326409884|gb|ADZ66949.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539598|gb|ADZ87813.1| HemY domain protein [Brucella melitensis M5-90]
          Length = 523

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|17986463|ref|NP_539097.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M]
 gi|265991915|ref|ZP_06104472.1| HemY domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993646|ref|ZP_06106203.1| HemY domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265999298|ref|ZP_05465724.2| HemY domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|17982061|gb|AAL51361.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M]
 gi|262764627|gb|EEZ10548.1| HemY domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002981|gb|EEZ15274.1| HemY domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093114|gb|EEZ17249.1| HemY domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
          Length = 525

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 416 VTGRLNSFEWKVP 428


>gi|261755593|ref|ZP_05999302.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686]
 gi|261745346|gb|EEY33272.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686]
          Length = 525

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 243 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 416 VTGRLNSFEWKVP 428


>gi|225628086|ref|ZP_03786121.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|261217713|ref|ZP_05931994.1| HemY domain-containing protein [Brucella ceti M13/05/1]
 gi|261220938|ref|ZP_05935219.1| HemY domain-containing protein [Brucella ceti B1/94]
 gi|261315072|ref|ZP_05954269.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261316370|ref|ZP_05955567.1| HemY domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261321440|ref|ZP_05960637.1| HemY domain-containing protein [Brucella ceti M644/93/1]
 gi|261758825|ref|ZP_06002534.1| HemY domain-containing protein [Brucella sp. F5/99]
 gi|265987442|ref|ZP_06099999.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1]
 gi|265996898|ref|ZP_06109455.1| HemY domain-containing protein [Brucella ceti M490/95/1]
 gi|225616911|gb|EEH13958.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|260919522|gb|EEX86175.1| HemY domain-containing protein [Brucella ceti B1/94]
 gi|260922802|gb|EEX89370.1| HemY domain-containing protein [Brucella ceti M13/05/1]
 gi|261294130|gb|EEX97626.1| HemY domain-containing protein [Brucella ceti M644/93/1]
 gi|261295593|gb|EEX99089.1| HemY domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261304098|gb|EEY07595.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261738809|gb|EEY26805.1| HemY domain-containing protein [Brucella sp. F5/99]
 gi|262551366|gb|EEZ07356.1| HemY domain-containing protein [Brucella ceti M490/95/1]
 gi|264659639|gb|EEZ29900.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1]
          Length = 525

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFP 296

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 416 VTGRLNSFEWKVP 428


>gi|254707585|ref|ZP_05169413.1| hypothetical protein BpinM_11596 [Brucella pinnipedialis
           M163/99/10]
 gi|254708877|ref|ZP_05170688.1| hypothetical protein BpinB_01173 [Brucella pinnipedialis B2/94]
 gi|254713700|ref|ZP_05175511.1| hypothetical protein BcetM6_10155 [Brucella ceti M644/93/1]
 gi|254715950|ref|ZP_05177761.1| hypothetical protein BcetM_05867 [Brucella ceti M13/05/1]
 gi|256030403|ref|ZP_05444017.1| hypothetical protein BpinM2_07105 [Brucella pinnipedialis
           M292/94/1]
 gi|256158386|ref|ZP_05456284.1| hypothetical protein BcetM4_05995 [Brucella ceti M490/95/1]
 gi|256253805|ref|ZP_05459341.1| hypothetical protein BcetB_05837 [Brucella ceti B1/94]
 gi|260169312|ref|ZP_05756123.1| hypothetical protein BruF5_13330 [Brucella sp. F5/99]
          Length = 523

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|23502736|ref|NP_698863.1| hypothetical protein BR1884 [Brucella suis 1330]
 gi|254704899|ref|ZP_05166727.1| hypothetical protein Bsuib36_13470 [Brucella suis bv. 3 str. 686]
 gi|23348752|gb|AAN30778.1| conserved hypothetical protein [Brucella suis 1330]
          Length = 523

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|237816247|ref|ZP_04595240.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260755565|ref|ZP_05867913.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260758788|ref|ZP_05871136.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260760512|ref|ZP_05872855.1| HemY domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884589|ref|ZP_05896203.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68]
 gi|261214836|ref|ZP_05929117.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|261323831|ref|ZP_05963028.1| HemY domain-containing protein [Brucella neotomae 5K33]
 gi|261751032|ref|ZP_05994741.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513]
 gi|237788314|gb|EEP62529.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260669106|gb|EEX56046.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260670944|gb|EEX57765.1| HemY domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675673|gb|EEX62494.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260874117|gb|EEX81186.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68]
 gi|260916443|gb|EEX83304.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|261299811|gb|EEY03308.1| HemY domain-containing protein [Brucella neotomae 5K33]
 gi|261740785|gb|EEY28711.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513]
          Length = 525

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 416 VTGRLNSFEWKVP 428


>gi|62290741|ref|YP_222534.1| hypothetical protein BruAb1_1861 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700652|ref|YP_415226.1| hypothetical protein BAB1_1884 [Brucella melitensis biovar Abortus
           2308]
 gi|148559352|ref|YP_001259709.1| hypothetical protein BOV_1812 [Brucella ovis ATCC 25840]
 gi|163843908|ref|YP_001628312.1| HemY domain-containing protein [Brucella suis ATCC 23445]
 gi|189024954|ref|YP_001935722.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19]
 gi|254690029|ref|ZP_05153283.1| hypothetical protein Babob68_07641 [Brucella abortus bv. 6 str.
           870]
 gi|254694518|ref|ZP_05156346.1| hypothetical protein Babob3T_07639 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696143|ref|ZP_05157971.1| hypothetical protein Babob28_00127 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254700528|ref|ZP_05162356.1| hypothetical protein Bsuib55_06701 [Brucella suis bv. 5 str. 513]
 gi|254731061|ref|ZP_05189639.1| hypothetical protein Babob42_07671 [Brucella abortus bv. 4 str.
           292]
 gi|256059861|ref|ZP_05450048.1| hypothetical protein Bneo5_05852 [Brucella neotomae 5K33]
 gi|256258283|ref|ZP_05463819.1| hypothetical protein Babob9C_13253 [Brucella abortus bv. 9 str.
           C68]
 gi|260546004|ref|ZP_05821744.1| HemY domain-containing protein [Brucella abortus NCTC 8038]
 gi|297247127|ref|ZP_06930845.1| HemY protein [Brucella abortus bv. 5 str. B3196]
 gi|62196873|gb|AAX75173.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616753|emb|CAJ11840.1| unnamed protein product [Brucella melitensis biovar Abortus 2308]
 gi|148370609|gb|ABQ60588.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|163674631|gb|ABY38742.1| HemY domain protein [Brucella suis ATCC 23445]
 gi|189020526|gb|ACD73248.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19]
 gi|260096111|gb|EEW79987.1| HemY domain-containing protein [Brucella abortus NCTC 8038]
 gi|297174296|gb|EFH33643.1| HemY protein [Brucella abortus bv. 5 str. B3196]
          Length = 523

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|306842962|ref|ZP_07475596.1| HemY domain protein [Brucella sp. BO2]
 gi|306286890|gb|EFM58415.1| HemY domain protein [Brucella sp. BO2]
          Length = 523

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 224/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHAHARAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA  Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIAATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|163869275|ref|YP_001610531.1| hypothetical protein Btr_2583 [Bartonella tribocorum CIP 105476]
 gi|161018978|emb|CAK02536.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 520

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 252/498 (50%), Gaps = 18/498 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++  +F+ V+++     +T+ +  +  S   +LS+L       +LL+ 
Sbjct: 1   MIRVFIYTFVVCILGLAFVWVANHNGVFVLTFLHFRFSASLLTVLSVLTLLFVTLVLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +  FF S P+ L +  +KR   +GY+AL  G+++  A +  +A+KM + V++      E 
Sbjct: 61  LLSFFFSIPSALSNYFYKRQRKRGYEALSKGILATFAGDSMVAQKMEARVAKYLAGKQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV  L+ QI   +     A    E M +   T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LVKFLKAQILSLQNNSVRAISLYEEMRKEDPTKLVGLYGLFREAMKSKAYEAAQQYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR------AILLIARSL 234
           L +SP   W  +AV+ +     +W +A+T   + +K      R+        +LL++   
Sbjct: 181 LTLSPALLWAHQAVLDRLGAEGKWDKALTVFERAQKALPRSVRSTPERQHIQVLLLSGQA 240

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            +  +   + +    +++ KL  + +  +I AA  L   N+ RKA+ ++   W+  PHP+
Sbjct: 241 LHLFETHPVQAREAILKAHKLAPDFVPITIIAADILYKLNETRKADKMIIAAWQKEPHPD 300

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y     E  +G+LKRA  L   NK+  ES  ++SK AL+ G    A  +A  A++ 
Sbjct: 301 LGTLYIE-REEGAIGRLKRAKTLASYNKDVFESAFLISKAALDAGETILAREQAQKALQY 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
            PR+ ++LLLA IE+A  +N   +  W   AL A  DP+W+  +G + S W  +SPIS  
Sbjct: 360 HPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMC-EGSIFSSWSAVSPISGR 418

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474
           L  FEWK P + P  ++ E +N    +     D + ++   +      ++K++  +DS +
Sbjct: 419 LGCFEWKAPPRLPS-LTLEAVN----IVPKKQDKEDVVEESEGVEDKKLEKLTPIDDSFL 473

Query: 475 HPLDPHIRQPDDPGIKEQ 492
           H  +  + + D   IKEQ
Sbjct: 474 H--NAQVEKQD---IKEQ 486


>gi|300024948|ref|YP_003757559.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526769|gb|ADJ25238.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 577

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 223/447 (49%), Gaps = 13/447 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ Y   I+L+      ++  P  + I W      TS F  + +L   + + + L++
Sbjct: 1   MVRLVVYLVTIALIASGLAWLADRPGTLQIAWQGYDIETSVFRAVVLLAAAVASIVFLWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R   + PA +   L +R   KG  A+ +GL++I A +  LA +    +  + +  +E 
Sbjct: 61  VFRALWNSPAAIGGRLVQRRQRKGLDAVSSGLIAIGAGDSTLASRF--ALQARKSLPHEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L +LL  Q A        A    E ML  P T    +  L+ E+   G   +A+++A +A
Sbjct: 119 LTHLLRAQSAELSGDRATARRIYEAMLASPETELLGLRGLFLEAQHQGADEAARQFADRA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L  +P   W   A+ +Q    K+W+ A+  L   +KN      + +R RA+LL A++ +N
Sbjct: 179 LKANPKLGWSATALFEQQCKQKDWTGALETLQHARKNGHIAKADADRKRAVLLTAKA-QN 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++     +   A+E+  L  + + A+  A + L S+    KA  +L+K W  +PHP++A
Sbjct: 238 VEEDSPDRALTLAMEAHALAPDLVPAAAIAGRILASRGNTAKAAKVLQKTWAKSPHPDLA 297

Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMK 353
           + Y +  + ++T  +  R  +L  +N  S+ES + V+  A+E    D+A    + +L  +
Sbjct: 298 SAYAYARVGDSTRDRFDRERQLAALNPHSIESPIAVATAAIEARMYDEARRVLEPLLPER 357

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
           +  R  +  L+A+IE  ++ +  ++  W   A++A  DP WI+ DG +S  W P SP+  
Sbjct: 358 LTQR--VATLMARIEAGDNGDKGRVREWLARAMNAARDPAWIA-DGVISDHWEPTSPVDG 414

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLE 440
            L  F+W++P ++ +   +E +   +E
Sbjct: 415 RLDAFQWRVPVETRDATRNEILARRIE 441


>gi|306844854|ref|ZP_07477437.1| HemY domain protein [Brucella sp. BO1]
 gi|306274786|gb|EFM56567.1| HemY domain protein [Brucella sp. BO1]
          Length = 523

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 224/433 (51%), Gaps = 17/433 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +    +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 295 HPDIASTYIYARSGDAAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413

Query: 411 ISKTLCYFEWKIP 423
           ++  L  FEWK+P
Sbjct: 414 VTGRLNSFEWKVP 426


>gi|294851122|ref|ZP_06791795.1| HemY protein [Brucella sp. NVSL 07-0026]
 gi|294819711|gb|EFG36710.1| HemY protein [Brucella sp. NVSL 07-0026]
          Length = 480

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 225/434 (51%), Gaps = 17/434 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++   + K+   + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D      ++H      A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  P
Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296

Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A  
Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVLLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP
Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415

Query: 411 ISKTLCYFEWKIPT 424
           ++  L  FEWK+P 
Sbjct: 416 VTGRLNSFEWKVPV 429


>gi|121602299|ref|YP_988402.1| hypothetical protein BARBAKC583_0064 [Bartonella bacilliformis
           KC583]
 gi|120614476|gb|ABM45077.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 531

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 217/433 (50%), Gaps = 10/433 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ Y F + ++   F  V+++   V IT+    +  S   +LS+    L    L++ 
Sbjct: 1   MIRVVVYSFAVCVLGALFGWVANHNSIVVITFLQTRFAISLLTLLSVSIVLLVMLALVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  L      R   KG +AL  GL+++ + +   A+KM +   +    ++E 
Sbjct: 61  LLRGLFFAPNALRRYFSTRRQKKGREALSQGLLAVFSGDYVTAKKMETCALKYLANNHEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL+ Q    ++    A    E M Q   T+   +Y LY E+  + +  +AQ YA +A
Sbjct: 121 LMKLLQAQTLFLQKDSIRAIGFYEEMRQETPTKLAGLYGLYREAVAMKEDEAAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNR----AILLIARS 233
           L +SP   W  +AV+ +     +W +A+    + +K    A  W   R    A+LL  ++
Sbjct: 181 LALSPALLWAHQAVIDRLSAEGQWDKALDVFEKAQKALPRADRWTAERNYTYALLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L+   K   + +    +++ KL  + +  ++  A  L   N+ RKA+ I+   WK  PHP
Sbjct: 241 LQ-LFKTHPVKARTAILKAHKLLPDFVPITVITADILYKSNEVRKADKIIFNAWKKEPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++   Y     E  V +LK+A +L   N+++ ES  +V+K AL+ G ++ A  +A  A++
Sbjct: 300 DLGACYLK-NEERAVERLKKAKKLASYNEDTFESAFLVAKAALDAGEVEFAREQAQKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
           + PR+ ++LLLA IE+A  ++   +  W   AL A  DP W+  DG L S W  +SPIS 
Sbjct: 359 LHPRESVYLLLADIEEAQGNDQLLVRQWLSLALRAERDPTWMC-DGTLFSSWSAVSPISG 417

Query: 414 TLCYFEWKIPTKS 426
            L  FEWK P +S
Sbjct: 418 RLGCFEWKAPPRS 430


>gi|254504335|ref|ZP_05116486.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11]
 gi|222440406|gb|EEE47085.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11]
          Length = 660

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 214/430 (49%), Gaps = 13/430 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +F ++ L    F  ++  P  +S++W   ++   P V+  ++   L A++++  
Sbjct: 11  MIRVLIFFAMLFLAALGFAWMADLPGTISVSWNGYVWEQPPVVVALVVGLVLVAFLVVIG 70

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R  L  P +      +R  DKGY AL  GL+++   N  +AR+    +      + E 
Sbjct: 71  VIRAILKSPQIAGRFFKQRRKDKGYTALSQGLIALGTGNAKMARRYG--LDADKLLNEEP 128

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q A    +   A ++ E ML  P T+   ++ L+ E+ R  +  +A+ YA +A
Sbjct: 129 ATKLLLAQTAQLAGKDGEARQRFEAMLDDPNTKTLGLHGLFVEAERQREPVAARHYAEEA 188

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILL--IARSL 234
           +  +P   W  +AV+    +A  W  A+  L +    K  + K + R RA++L  +A  L
Sbjct: 189 VKAAPGLEWAGKAVLGYQAVAHHWDEALKTLERNYTSKLLDKKAYRRQRAVILTALAHKL 248

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           E+    D   ++  A E+  L    + A++  ++    +   RKA  ++E  W+++PHPE
Sbjct: 249 ED---NDPDRAFSLAKEAHGLALELVPAAVITSRLATRRGDIRKASKVIEATWRLSPHPE 305

Query: 295 IANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A  Y+H+   ++ V +LKRA  L      + E  + ++K ALE    ++A  +    ++
Sbjct: 306 LAETYSHVRTGDSAVDRLKRAKSLAAQRANTAEGAIAIAKAALEAREFEEARTQLKKVLQ 365

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             P +  F+L+A++E+  + +  ++  W   A+ A  D  WI+ DG +SS W  +SP++ 
Sbjct: 366 SEPTRAAFILMAEVEETETGDKGRVRDWLARAVKASLDKAWIA-DGVVSSEWQAVSPVTG 424

Query: 414 TLCYFEWKIP 423
            L  F+W  P
Sbjct: 425 KLDAFQWSSP 434


>gi|299133147|ref|ZP_07026342.1| HemY domain protein [Afipia sp. 1NLS2]
 gi|298593284|gb|EFI53484.1| HemY domain protein [Afipia sp. 1NLS2]
          Length = 545

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 250/527 (47%), Gaps = 45/527 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  +  ++++       V+     V ++W      TS  V+  +    + A IL++ 
Sbjct: 1   MVRIFSFLILLTVAALGATWVADQSGGVVLSWNGWRAETSLPVLALLALILVIAAILVWT 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R F   PA L    H++   K   A+  GL+++   +  LA + H+  +++   H+  
Sbjct: 61  IVRAFWKTPARLRRYRHEKREAKARHAITQGLIAVGTGDSSLAHR-HAGTAKRLAEHDP- 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  E     A      M +    R   +  L+ E+ R  DL++A   A +A
Sbjct: 119 LTLLLQAQTAQLEGDRPGAQHAFHAMAERQDMRLLGLRGLFIEAQRNDDLHTAVAMAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-----KNAKEWNRNRAILLIARSLE 235
           L I+P +PW + AV+       +W  A+  L+        +NA  + R R +LL AR+LE
Sbjct: 179 LKIAPSSPWASHAVLGFRCAQSDWDGALALLDSNYSASLIENAP-YRRQRGVLLTARALE 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             ++ D   S   A+E++K     + A++ AAK     N+ R+A   +E  W  NPHP++
Sbjct: 238 LEER-DRDLSRKSAMEAIKFAPQLVPAAVLAAKFYSEDNQVRRAMRTIEVAWNANPHPDL 296

Query: 296 ANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A+ Y H+ L ++   +L R   L +   +  ES + +++ A+E     +A  +A+  +  
Sbjct: 297 ADAYAHVRLGDSARERLARVELLAQKAPDHRESRLAIARAAIEASEFGRAR-EALAPLLT 355

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
              + + LL+A++E+A +H+  +   WT  A+ A PDP W + DGY+S  W P+SP++  
Sbjct: 356 TMTQRVALLMAELERAGNHDEGRAREWTARAVRAAPDPAWTA-DGYVSDRWRPVSPVTGR 414

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL------PSIKKV-- 466
           L  F+W  P  +   ++S++++ + E ++  + L    +   ++ +      P+++K   
Sbjct: 415 LDAFQWVTPVAA---LTSDHVDVAAEASHLPEKLPEPASVAIESKVAPAEPEPAVEKAPV 471

Query: 467 ----SSFEDSTIHP------------------LDPHIRQPDDPGIKE 491
               +  +   + P                  + P +R PDDPG+ E
Sbjct: 472 EAAPAPVKTDNVAPPVFRARPAGEARSPAPSAIIPLVRAPDDPGVPE 518


>gi|49474780|ref|YP_032822.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse]
 gi|49240284|emb|CAF26758.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse]
          Length = 518

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 243/514 (47%), Gaps = 32/514 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ Y FV+ ++  +F  V+++ + + IT+ +  +  S   +LS+L  FL   + L+ 
Sbjct: 1   MTRVLIYTFVVCMLGLAFGWVANHNDVLIITFLHFRFSISLLTLLSVLILFLGILVFLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +     S P  L +  +KR    GY+AL  G+++  A +   A+KM + V +     +E 
Sbjct: 61  LLSVLFSLPGTLSNYFYKRGQKLGYEALSQGVLAAFAGDGVAAKKMEARVVKYLAGKHEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV LL+ Q    +     A    E M +   T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LVKLLQAQALSLQNNSARAISLYEEMRKETPTKLAGLYGLFREAMKANAYEAAQQYAQEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233
           L +SP   W  + V+ +      W +A+    + +K       +  E    +A+LL  ++
Sbjct: 181 LALSPALLWAYQLVLDRLSAQGRWDKALDVFERAQKVLPRSVRSTPERQHVQALLLSGQA 240

Query: 234 L-----ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L        D   +I   H      +L  + +  ++ AA  L   N+ RKA+ ++   W+
Sbjct: 241 LHLFRTHPTDARKVILKAH------RLVPDFVPITVIAADILYKLNETRKADKMIIAAWQ 294

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            NPHP +  +Y     E  VG+LK+A  L   +K++ ES  +V+K AL+ G    A  +A
Sbjct: 295 KNPHPNLGALYLE-REEGAVGRLKKAKALASYSKDTFESAFLVAKAALDAGERVLAREQA 353

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408
             A++   R+ ++LLLA IE+A  +N   +  W   AL A  DP+W+  DG + S WLP+
Sbjct: 354 QKALQYHRRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWLPV 412

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
           SPIS  L  FEWK P   P      +    L      D    M  N  ++ L  + +  +
Sbjct: 413 SPISGRLGRFEWKAPPSPPPLTLETDNTIVLTKKSQEDKNDIMGKNVVEDKL--LNEFPA 470

Query: 469 FEDSTIHPLDPH---IRQP-------DDPGIKEQ 492
            ++  +H    +    RQ        DDPGIK +
Sbjct: 471 VKNDLLHSAQTNKQGARQSSKTRLNVDDPGIKTE 504


>gi|218515793|ref|ZP_03512633.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3]
          Length = 364

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/257 (39%), Positives = 154/257 (59%), Gaps = 7/257 (2%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAI 227
           +A++YA KA D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+
Sbjct: 1   AARQYAEKAADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAV 60

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           LL AR+ E  + G+   +  DA+++LKL  + + A++ AAK+L  +   RKA  ILE+ W
Sbjct: 61  LLTARAAEKLE-GNPAGARDDALQALKLAADFVPAALIAAKALFREGGLRKAASILEQAW 119

Query: 288 KVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           K  PHPE+   Y    S ++T+ +LKRA RLE +   +VESL++V++ AL+     +A A
Sbjct: 120 KSAPHPEVGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARA 179

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406
           KA  A +I PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WL
Sbjct: 180 KAEAAARIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWL 238

Query: 407 PLSPISKTLCYFEWKIP 423
           P+SP++  +  FEWK P
Sbjct: 239 PVSPVTGRIDAFEWKAP 255


>gi|239833008|ref|ZP_04681337.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|239825275|gb|EEQ96843.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301]
          Length = 480

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 220/443 (49%), Gaps = 9/443 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++ +T+    Y       ++ +   + A ++L+ 
Sbjct: 1   MLRVLFYLVIVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAILILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L      R  D+GY++L TGL++  A +   AR+M     Q  +   E 
Sbjct: 61  LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGQLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M+  P TR   +  LY E+ R+G  ++A+ YA +A
Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGAHDAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236
              +P   W + AV+ Q+    +W  A+  ++ +K+   ++K+   + RA LL A+++  
Sbjct: 181 AAQAPQLEWASSAVMGQFCAEGDWDAALKLVDARKQALSHSKDVVKKERAALLTAKAMAV 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D   +   A+E+ KL  + + A++ AA++L S    RK   ILE  WK  PHP+IA
Sbjct: 241 VDV-DHAQARTLALEANKLAPDLVPAAVVAARALFSDGDIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ +
Sbjct: 300 STYVYARSGDTAQDRLKRAKHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+S  W P     +T 
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSPGIAGYRTA 418

Query: 416 CYF--EWKIPTKSPEYISSENIN 436
             F  E       P +   E  N
Sbjct: 419 EQFRVEGSCGGTGPSHRGGEARN 441


>gi|209883479|ref|YP_002287336.1| HemY protein [Oligotropha carboxidovorans OM5]
 gi|209871675|gb|ACI91471.1| HemY protein [Oligotropha carboxidovorans OM5]
          Length = 572

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 210/420 (50%), Gaps = 15/420 (3%)

Query: 30  ITWGNRLYRTSPFVILSILYFFLFA-WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKAL 88
           ++W      TS   + ++L   L A  +++++V R F   P  L     ++   K  +A+
Sbjct: 30  LSWSGWRIETS-LPVAALLGVILLAVALVVWSVVRTFWKAPEGLRRRRREKRAAKARRAI 88

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             GL+++   +   A + H+ ++ +   H+  L  +L+ Q A  E     A      M +
Sbjct: 89  TQGLIAVGTGDS-FAAQRHAGMATRLAAHDP-LALMLQAQTAQLEGDRAGAQRAFRAMAE 146

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               R   +  L+ E+ R  D  +A   A +AL I+P +PW ++AV+       +W  A+
Sbjct: 147 RKDMRLLGLRGLFIEAQRSDDAYTAVAMAEEALKIAPASPWASQAVLGFRCAGSDWDGAL 206

Query: 209 TFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             L+  K         + R R +LL AR+L   ++ D  AS   A+E++KL    + A++
Sbjct: 207 ALLDTNKAAGLVEPAVYRRERGVLLTARALALEER-DRDASRKSAMEAVKLAPQLVPAAV 265

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKE 323
            AAK     N+ R+A  ++E  W  NPHP++A+ Y H+ L ++   +L R   L +   +
Sbjct: 266 LAAKFYSEDNQVRRAMRVVEAAWVANPHPDLADAYAHVRLGDSARERLSRVEMLAQKTPD 325

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
             E  + V++ A++ G  ++A  +A+  +  AP + + LL+A++E+AN H+  +   WT 
Sbjct: 326 HREGRLAVARAAIDAGEFERAR-EALAPLIDAPTQRVALLMAELERAN-HDEGRAREWTA 383

Query: 384 SALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINFSLEM 441
            A+ A PDP W + DGY+S  W P+SP++  L  F+W  P    +PE  + E    +L M
Sbjct: 384 RAVRAAPDPAWTA-DGYVSDRWRPVSPVTGRLDAFQWVTPVAALAPERATIEAETPTLPM 442


>gi|319409418|emb|CBI83064.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
           R1]
          Length = 510

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 215/444 (48%), Gaps = 16/444 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFL-FAWILLF 59
           M+R+  Y FV+ ++  +F  V+ +   V+IT+ +     S    LS    FL   W LL+
Sbjct: 1   MIRVFIYIFVVCVLGAAFGWVASHNSVVTITFMHTRLSISLLAFLSTFIVFLGILWGLLY 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V       P   ++  + R   +G +AL  GL++    +   A+KM +   +    + E
Sbjct: 61  VVC----FAPGAFYNYFYTRRQRRGREALSQGLLAAFIGDHLTAQKMETRALKYLEENCE 116

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L+ LL+ Q  + ++    A    E M Q  +T+   +Y L+ E+       +AQ YA +
Sbjct: 117 PLIKLLQAQTLVLQKDSIRAIHLYEEMRQKKSTKLAGLYGLFREAMDTKTYEAAQHYAQE 176

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIAR 232
           A  +SP   W  +AV+ +     +W  A+    + +K          E N   A+LL  +
Sbjct: 177 AFTLSPSLVWAHQAVLDRLSAEGQWDEALDVFEKVQKALPRSARLTAERNHTHALLLSGK 236

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +L +  K   + +    +++ KL  +    ++  A  L   N+ RKA+ I+ + WK +PH
Sbjct: 237 AL-HVFKIHPVKARSAILKAHKLVPDFGPITVITAGILYKLNETRKADKIIIEAWKKDPH 295

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           P+   +Y     E  VG+LK+A +L   NK + ES  +++K AL+ G +  A  +A  A+
Sbjct: 296 PDFGALYLGR-EERAVGRLKKAKKLASYNKNTFESAFLIAKAALDAGELTLAREQAKKAL 354

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
              PR+ ++LLLA IE+   ++   +  W   A +A  DP WI D+   SS W  +SPIS
Sbjct: 355 NYHPRESVYLLLADIEEVQGNDQGLVHQWLSLARNAERDPTWICDNTLFSS-WSAVSPIS 413

Query: 413 KTLCYFEWKIPTKS-PEYISSENI 435
             L  FEWK P +  P  + +++I
Sbjct: 414 GRLGCFEWKAPPRRFPLTLEADDI 437


>gi|254473094|ref|ZP_05086492.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062]
 gi|211957815|gb|EEA93017.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062]
          Length = 613

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 209/432 (48%), Gaps = 16/432 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +F  + L+      ++  P  V++ W   + + S    +      + A I+++ 
Sbjct: 1   MVRVLIFFAFVFLLALGGAWMADRPGVVTLEWQGYVVQASLLTTVVAFGASIVASIVVWG 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P ++ H + +R  DKGY AL  GLM++ + +   ARK     + +    +E 
Sbjct: 61  FFRLIWKSPTLVSHFMQRRRKDKGYDALSQGLMALGSGDTLHARKF-GLKADKLLDGDEP 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q +  +  +  +  + E ML+   +    ++ LY E+ R  +  +A+ +A +A
Sbjct: 120 AARLLLAQASQLDGDHAESRRRFEAMLEDDRSMAVGLHGLYIEAERESEPAAARHFAEEA 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLE- 235
            ++ P   W   AV+    ++ +W  AI  L +    +  + K   R +A+LL AR+LE 
Sbjct: 180 FNLVPGLRWAGNAVLGYQAVSGDWEEAIATLERNYAARMLDKKTLRRQKAVLLTARALEL 239

Query: 236 ---NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
              N D+   +A     +E+  L  + + A+I AA+      + RKA  ILE  WK++PH
Sbjct: 240 ENENPDRARTLA-----VEAHGLAPSLVPAAIVAARLRTRAGEIRKASKILEATWKLSPH 294

Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           P++A  Y H+   ++V  +L R   L  +   S E  + ++  A+E    D+A  +    
Sbjct: 295 PDLAEAYAHVRPGDSVTDRLSRVRTLASMRAYSSEGAIAIAVAAIEAKKFDEAREQLKRV 354

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
           ++  P +  FLL+A +E+    +  +I  W   A+ A  D +WI+ DG +S+ W P+SP 
Sbjct: 355 LRSEPTQRAFLLMADLEEREHGDQGRIREWLSRAVRAPHDKVWIA-DGVVSANWAPVSPK 413

Query: 412 SKTLCYFEWKIP 423
           +  +  +EW  P
Sbjct: 414 TGRVDAYEWATP 425


>gi|49476261|ref|YP_034302.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1]
 gi|49239069|emb|CAF28372.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1]
          Length = 517

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 10/434 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ Y FV+ L   +F  V++Y + + IT+ +  +  S    LS+L  FL    LL+ 
Sbjct: 1   MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +     S P +L +  +KR    GY+AL  G +++ A +  +A+KM + V +    + E 
Sbjct: 61  LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q    +     A    E M +   T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233
             +SP   W  +AV+ +      W +A+    Q +K        A E    +A+LL  ++
Sbjct: 181 QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L +  +   + +    +++ KL  + I  ++ AA  L   N+ RKA+ ++   W+  PHP
Sbjct: 241 L-HLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++  +Y     E  VG+LK+A  L   NK++ ES  +++K AL+ G    A  +A  A++
Sbjct: 300 DLGALYLE-REEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
              R+ ++LLLA IE+A  +N   +  W   AL A  DP+W+  DG + S W  +SPIS 
Sbjct: 359 YHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWAVISPISG 417

Query: 414 TLCYFEWKIPTKSP 427
            L  FEWK P + P
Sbjct: 418 RLGCFEWKAPPRMP 431


>gi|319404858|emb|CBI78459.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 514

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 213/461 (46%), Gaps = 10/461 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++   F   ++    + IT+    +  S   I+S +   L   + L+ 
Sbjct: 1   MIRIFIYIFVVCVIGAVFSWGANNNSFLVITFLQMRFTVSLLTIISGIVILLMVLVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+     R  + G KAL  GL++  A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPRTLYSFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYFIKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +  +T+   +Y L+ E+      + AQ YA +A
Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDESTKLAGLYGLFREAMNTKAYDVAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIARSLE 235
           LD+SP   W  + V+ +     +W++A+    + ++           R     L+   L 
Sbjct: 181 LDLSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCTSERKYTHALLLSGLA 240

Query: 236 NADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                  +A    AI ++ KL  + +  ++     L    + RKA+ I+ K W+ NPHP+
Sbjct: 241 LHLTETQLAGARKAILKAHKLMPDFVPITVLMVDILYQLKEVRKADKIIIKAWQENPHPD 300

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y     E+ VG+LKRA  L   NKE  ES  IV+K AL+ G ++ A   A  A+  
Sbjct: 301 LGALYLR-REESAVGRLKRAKTLAFYNKEIFESAFIVAKAALDAGELELAREYAQKALTY 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
            PR+ ++LLLA IE+A   N      W   AL A PDP W  D  + SS WL +SPIS  
Sbjct: 360 HPRESVYLLLADIEEAKG-NGQGSRQWLSLALRAEPDPAWACDGSFFSS-WLIVSPISGR 417

Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNN 454
           L   EWK+P + SP  +  +N+    E      D + ++ N
Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKGVIKN 458


>gi|319899462|ref|YP_004159559.1| hypothetical protein BARCL_1326 [Bartonella clarridgeiae 73]
 gi|319403430|emb|CBI76998.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 514

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 209/443 (47%), Gaps = 12/443 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++   F   ++    + IT+    +  S   I+S L   L   + L+ 
Sbjct: 1   MIRIFIYVFVVCVIGAVFSWCANNNSFLVITFLQMRFTVSLLTIVSGLVILLAILVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+    +    +G KAL  GL++  A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPRSLYSFFSRHYQKQGGKALTQGLLAAFAGDYMTAQKMEVRALRYLVKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +   T+    Y L+ E+      + AQ YA +A
Sbjct: 121 LIKLLRAQILFLQKDSMNAIVLYEEMKKEELTKLAGFYGLFREAINTKAYDIAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233
           L +SP   W  + V+ +     +W++A+   ++ ++          E     A+LL   +
Sbjct: 181 LALSPTLLWAQQFVLDRLSAEGKWNKALDVFHRAQRALPRSEHCTPERKYIHALLLSGLA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L   +   ++ +    +++ KL  + +  ++  A  L    + RKA+ I+ K W+ NPHP
Sbjct: 241 LHFVET-QLVEARKAILKAHKLMPDFVPITVIMADILYKLKEVRKADKIIIKAWQENPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +   +Y     E+ VG+LKRA +L   NK+  ES  IV+K AL+ G ++ A   A  A+ 
Sbjct: 300 DFGTLYLR-REESAVGRLKRAKKLASYNKDIFESSFIVAKAALDAGELELARECAQKALT 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             PR+ ++LLLA IE+A   N      W   AL A  DP W  D  + SS W  +SPIS 
Sbjct: 359 YHPREGVYLLLADIEEAQG-NDQGSRQWLSLALRAERDPAWACDGSFFSS-WSAVSPISG 416

Query: 414 TLCYFEWKIPTK-SPEYISSENI 435
            L  FEWK+P + SP  +  +N+
Sbjct: 417 RLGRFEWKVPPRCSPITLEVDNM 439


>gi|91974947|ref|YP_567606.1| HemY-like [Rhodopseudomonas palustris BisB5]
 gi|91681403|gb|ABE37705.1| HemY-like [Rhodopseudomonas palustris BisB5]
          Length = 588

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 211/432 (48%), Gaps = 18/432 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSI---LYFFLFAWI 56
           MLR+I +  +I+L       V+  P DV ++W + R     P  +L +   +   + AW 
Sbjct: 1   MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNDWRAEMRLPVFVLGLGAAIVSIVLAWA 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           ++  + R     P+ +     +R   +   A+  GL+++  H    A + H+  +++H  
Sbjct: 61  IITGLWR----APSRMKRGRFERRSGRARHAITQGLLAVG-HGDAAAARNHASAARRHAP 115

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           H+  L  LL+ Q A  E   + A      M     T+   +  LY E+ R  D   A   
Sbjct: 116 HDP-LALLLQAQSAQLEGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRADDPYGALAI 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIAR 232
           A +AL + P++ W ++AV+       +WS A+    T L+    + K + R RA+LL AR
Sbjct: 175 AEEALRLQPNSTWASQAVLGFRCARADWSGALDILETNLSSGLVDKKVFRRQRAVLLTAR 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +++  D  + +A    A+E+ KL    I A++ AAK L   ++ R+A  ++E  W+  PH
Sbjct: 235 AIDLEDSDESLA-RDSALEANKLAPTLIPAAVLAAKCLAETHQVRRAMKVIEAAWQAQPH 293

Query: 293 PEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           P++A  Y ++   +    +L R   L   N    ES + +++  ++ G   +A  +A+  
Sbjct: 294 PDLAAAYANIKPGDPANIRLARVQNLIAKNPADFESALAIARAGIDAGEFSRAR-RALQP 352

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
               P + + +L+A+IE     +T K   WT  A+ A+PD +W + DGY S  W P+SP+
Sbjct: 353 FIDNPTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDAMWTA-DGYTSDHWRPVSPV 411

Query: 412 SKTLCYFEWKIP 423
           +  L  F+W++P
Sbjct: 412 TGRLDAFQWQVP 423


>gi|27375675|ref|NP_767204.1| hypothetical protein bll0564 [Bradyrhizobium japonicum USDA 110]
 gi|27348813|dbj|BAC45829.1| bll0564 [Bradyrhizobium japonicum USDA 110]
          Length = 580

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 215/437 (49%), Gaps = 18/437 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSP-FVILSILYFFLFAWILL 58
           MLR++ +  +I+L       V+  P D+ +T G  R   T P FV L  L  F  A +L+
Sbjct: 1   MLRIVLFLVLIALAAAGAAWVADQPGDLVLTAGGFRASTTLPRFVFL--LGLFAAAVVLV 58

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118
           +++       P  L    H++ + +G  A+  GL++I   +  LAR+ H+  +++H   N
Sbjct: 59  WSILTTIWRTPGRLRRRSHEKRHARGRHAITHGLLAIGHGDTALARR-HAETARRHA-PN 116

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           + L  LL  Q A  E   + A      M +   TR   +  L+ E+ R  D   A   A 
Sbjct: 117 DPLALLLHAQSAQLEGNRDEAQRAFRAMAEREDTRLLGLRGLFIEAQRADDAVGAVMIAE 176

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSL 234
           +A+ +SP + W + AV+       +WS A+  L+        +   + R R +LL AR+L
Sbjct: 177 EAIKLSPSSTWASHAVLGFRCARGDWSGALAILDSNLSAGLIDKPAYRRQRGVLLTARAL 236

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           E     D   +    +E++KL    + A++ AAK     ++ R+A  ++E  W  NPHP+
Sbjct: 237 E-LQTMDRDVARESVMEAIKLAPTLVPAAVLAAKFESEAHQVRRAMKLVEAAWLANPHPD 295

Query: 295 IANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAML 350
           +A  Y H+ L ++   +L+R   L      + ++  I  ++AL   +ID    + A+A+L
Sbjct: 296 LAEAYAHVKLGDSARQRLQRVETL-AAKTPADKAGHIEGQLALARAAIDASEFSRARAVL 354

Query: 351 AMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409
           A  +  P + + LL+A+IE+    +  +   WT  A+ A  DP W + DGY+S  W P+S
Sbjct: 355 APYVNDPTQRVALLMAEIERTEHGDGGRARAWTLRAVRARHDPAWTA-DGYVSDRWRPVS 413

Query: 410 PISKTLCYFEWKIPTKS 426
           P++  L  F+W+ P  S
Sbjct: 414 PVTGRLDAFQWQTPVAS 430


>gi|148251900|ref|YP_001236485.1| HemY domain-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146404073|gb|ABQ32579.1| putative exported protein of unknown function with HemY domain
           (porphyrin biosynthesis) [Bradyrhizobium sp. BTAi1]
          Length = 641

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 212/434 (48%), Gaps = 16/434 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59
           MLR++ +  ++ L       V+    DV + WG  R+  T P  +L+ L   + A +L++
Sbjct: 1   MLRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRIAMTLPVFVLA-LGLTITACVLVW 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +    L  P  + +    R + +G  A+  GL++I   ++  AR+ H+  +++    ++
Sbjct: 60  NLISALLRAPGRIRNHHRARRHQRGRHAITHGLLAIGHGDLTAARQ-HADAAKR-LAGDD 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A      + A      M +   TR   +  L+ E+ R  D  +A   A +
Sbjct: 118 PLTLLLHAQAAQLGGDRDGAQRAFRAMAERHDTRLLGLRGLFIEAQRADDAYAAVMIADE 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARS-- 233
           AL ++P+A W + AV+       +W+ A+  L+        +   + R R +LL AR+  
Sbjct: 178 ALKLAPNATWASHAVLGFRCAQGDWNGALAILDSNYTAGMIDKPTYRRQRGVLLTARAIA 237

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           LE  ++    AS   A+E++KL    I A++ AAK     ++ R+A  I+E  W   PHP
Sbjct: 238 LETENRDLARAS---AMEAVKLAPTLIPAAVLAAKFESEAHQVRRAMKIIEAAWTAGPHP 294

Query: 294 EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           ++A+ Y H+ L ++   +L R   L    ++ +E  + +++ A++     +A A A+   
Sbjct: 295 DLADAYAHVRLGDSARQRLTRIENLAARTRDHIEGALAIARAAIDAAEFGRARA-ALAPF 353

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
              P + + +L+A++E+    +  K   WT  A+ A  DP W + DGY+S  W P+SP++
Sbjct: 354 TDDPTQRVAMLMAELERTEHGDAGKSREWTLRAVRARHDPAWTA-DGYVSDHWRPISPVT 412

Query: 413 KTLCYFEWKIPTKS 426
             L  F+W+ P  S
Sbjct: 413 GRLDAFQWQTPVAS 426


>gi|319407818|emb|CBI81471.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
          Length = 514

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 215/461 (46%), Gaps = 10/461 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++   F   ++    + IT+    +  S   I+S L   L   + L+ 
Sbjct: 1   MIRIFIYIFVVCVIGAIFSWGANNNSFLVITFLQMRFTVSLLTIISGLVILLMVLVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+     R  + G KAL  GL++  A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPRTLYRFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYLIKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +   T+   +Y L+ E+      + A+ YA +A
Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDEPTKLAGLYGLFREAMNTKAYDVAKHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWN--RNRAILLIARSLE 235
           L +SP   W  + V+ +     +W++A+    + ++    ++  N  RN    L+   L 
Sbjct: 181 LALSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCNSERNYTHALLLSGLA 240

Query: 236 NADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                  +A    AI ++ KL  + +  ++     L    + RKA+ ++ K W+ NPHP+
Sbjct: 241 LHLTETKLAEARKAILKAHKLMPDFVPITVIMIDILYQLKEVRKADKMIIKAWQENPHPD 300

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y     E+ VG+LKRA  L   NK+  ES  IV+K AL+ G ++ A   A  A+  
Sbjct: 301 LGALYLR-REESAVGRLKRAKALASYNKDIFESAFIVAKAALDAGELELAREYAQKALTY 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
            PR+ ++LLLA IE+A   N      W   AL A PDP W  D  + SS WL +SPIS  
Sbjct: 360 HPRESVYLLLADIEEAQG-NGQGNRQWLSLALRAEPDPAWACDGSFFSS-WLIVSPISGR 417

Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNN 454
           L   EWK+P + SP  +  +N+    E      D + ++ N
Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKEVIKN 458


>gi|39933335|ref|NP_945611.1| HemY-like [Rhodopseudomonas palustris CGA009]
 gi|39652960|emb|CAE25702.1| unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 565

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 247/548 (45%), Gaps = 68/548 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSP---FVILSILYFFLFAWI 56
           MLR++ +  +I+L       V+  P +V ++W + +   T P    VI + +   + AW 
Sbjct: 1   MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           ++  V R     P  +      R   +   A+  GL+++   +   AR +H+  +++H  
Sbjct: 61  IILGVVR----APGWMKRGRSSRRSARARNAITQGLLAVGHGDSSTAR-LHANAARRHAP 115

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           H+  L  LL+ Q A  E     A      M     T+   +  LY E+ R  D  +A   
Sbjct: 116 HDP-LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAI 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232
           A +AL + P+  W ++AV+       +W+ A+  L +       + K + R RA+LL AR
Sbjct: 175 AEEALRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTAR 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++ + ++ D   +   A+E+ KL    + A++ AAK L   ++ R+A  ++E  W+  PH
Sbjct: 235 AI-DLEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPH 293

Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAM 349
           P++A+ Y +L   +T   +L R   L     + +ES + +++ A++ GS  +A    +  
Sbjct: 294 PDLASTYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPY 353

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409
           L M   P + + +L+A+IE  +  +T K   WT  A+ A+ DP+W + DGY+S  W P+S
Sbjct: 354 LDM---PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVS 409

Query: 410 PISKTLCYFEWKIPTKS--------------------------PEYISSENINFSLEMAY 443
           P++  L  F+W++P  +                          P   +SE +  ++E A 
Sbjct: 410 PVTGRLDAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAP 469

Query: 444 PA-----DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQ 483
            A      +  +++    K   P+    +                       P+ P +R 
Sbjct: 470 EAPIVAPKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRA 529

Query: 484 PDDPGIKE 491
           PDDPG+ E
Sbjct: 530 PDDPGVDE 537


>gi|188579976|ref|YP_001923421.1| HemY domain protein [Methylobacterium populi BJ001]
 gi|179343474|gb|ACB78886.1| HemY domain protein [Methylobacterium populi BJ001]
          Length = 511

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 218/443 (49%), Gaps = 23/443 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W      TS  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGTSLAIALTGVLVAAIILGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  PA +     +R  +KG  +L  G++++ + + PLA + H+    +    ++ 
Sbjct: 61  IVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA +A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYAAEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234
             ++P   W  EAV++      EWS A   + ++       K+A    R RA+LL A + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +  + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE
Sbjct: 236 QRHEAGEPETATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295

Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +  +Y +L + ++   +L RA  L +++    ES +++++ A E  S D A A+ +LA  
Sbjct: 296 LGKVYLNLRTGDSARDRLARAETLAKLSSWDPESRLVIAQAASE--SKDFARAREVLAPL 353

Query: 354 I--APRKEIFLLLAQIEQANSHNTD--KILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409
           +   P   +  ++A+IE A  H  D  +   W   A  A  DP W++ DG +S  W P+S
Sbjct: 354 VDDRPTSRVCRMMARIEAAE-HGADSGRSREWLARAARAPRDPAWVA-DGVVSERWAPVS 411

Query: 410 PISKTLCYFEWKIPTKSPEYISS 432
           P++  L  F WK P   PE ++ 
Sbjct: 412 PVTGRLDAFVWKTP---PEILAG 431


>gi|86747438|ref|YP_483934.1| HemY-like [Rhodopseudomonas palustris HaA2]
 gi|86570466|gb|ABD05023.1| HemY-like [Rhodopseudomonas palustris HaA2]
          Length = 583

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 214/434 (49%), Gaps = 22/434 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59
           MLR+I +  +I+L       V+  P DV ++W   R     P  IL  L   + A  L++
Sbjct: 1   MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNAWRAEMRLPVFILG-LGGAIVAIGLVW 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           A+       P  + H    R   K  +A+  GL+++  H    A + H+  +++H  H+ 
Sbjct: 60  AIIAALWRAPKRMKHGRAARRSGKANRAITQGLLAVG-HGDAAAARSHATAARRHAPHDP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
             + L      L E   + A      M     T+   +  LY E+ R  D  +A   A +
Sbjct: 119 LALLLQAQAAQL-EGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRANDPQAALAIAEE 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIARSLE 235
           AL + P+A W ++AV+       +W+ A+    T L+    + K + R RA+LL AR+L+
Sbjct: 178 ALRLQPNAAWASQAVLGFRCARADWTGALEILETNLSSGLVDKKAFRRQRAVLLTARALD 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             D  D   S   A+E+ KL    + A++ AAK L   ++ R+A  +LE  W+  PHP++
Sbjct: 238 VEDS-DQSLSRDSALEANKLAPTLVPAAVLAAKCLAETHQVRRAMKVLETAWQAEPHPDL 296

Query: 296 ANIYTHLLSENTVGKLKRALRLEE-INKESV--ESLVIVSKIALEMGSIDQAHAKAMLAM 352
           A  Y H+   +      R  R+E  I K++   ES + +++ A++ G      +KA LA+
Sbjct: 297 AEAYAHIKPGDP--PATRLARIENLIGKKATDFESALALARAAIDAGEF----SKARLAL 350

Query: 353 KI---APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409
           +     P + + +L+A+IE     +T K   WT  A+ A+PDP+W + DGY+S  W P+S
Sbjct: 351 QPYLDNPTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDPVWTA-DGYISDHWRPVS 409

Query: 410 PISKTLCYFEWKIP 423
           P+S  L  F+W++P
Sbjct: 410 PVSGRLDAFQWQVP 423


>gi|192288690|ref|YP_001989295.1| HemY domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192282439|gb|ACE98819.1| HemY domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 565

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 248/548 (45%), Gaps = 68/548 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSP---FVILSILYFFLFAWI 56
           MLR++ +  +I+L       V+  P +V ++W + +   T P    VI + +   + AW 
Sbjct: 1   MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           ++  V R     P+ +      R   +   A+  GL+++   +   AR +H+  +++H  
Sbjct: 61  IILGVVR----APSWMKRGRSSRRSARARNAITQGLLAVGHGDSGTAR-LHANAARRHAP 115

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           H+  L  LL+ Q A  E     A      M     T+   +  LY E+ R  D  +A   
Sbjct: 116 HDP-LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAI 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232
           A +AL + P+  W ++AV+       +W+ A+  L +       + K + R RA+LL AR
Sbjct: 175 AEEALRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTAR 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++ + ++ D   +   A+E+ KL    + A++ AAK L   ++ R+A  ++E  W+  PH
Sbjct: 235 AI-DLEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPH 293

Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAM 349
           P++A+ Y +L   +T   +L R   L     + +ES + +++ A++ GS  +A    +  
Sbjct: 294 PDLASTYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPY 353

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409
           L M   P + + +L+A+IE  +  +T K   WT  A+ A+ DP+W + DGY+S  W P+S
Sbjct: 354 LDM---PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVS 409

Query: 410 PISKTLCYFEWKIPTKS--------------------------PEYISSENINFSLEMAY 443
           P++  L  F+W++P  +                          P   +SE +  ++E A 
Sbjct: 410 PVTGRLDAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAP 469

Query: 444 PA-----DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQ 483
            A      +  +++    K   P+    +                       P+ P +R 
Sbjct: 470 EAPIVAPKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRA 529

Query: 484 PDDPGIKE 491
           PDDPG+ E
Sbjct: 530 PDDPGVDE 537


>gi|240137308|ref|YP_002961777.1| hypothetical protein MexAM1_META1p0562 [Methylobacterium extorquens
           AM1]
 gi|240007274|gb|ACS38500.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens AM1]
          Length = 511

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 216/455 (47%), Gaps = 18/455 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + + PLA + H+    +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A + + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+  ++   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE+A
Sbjct: 238 HEAGEPDSATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y +L + ++   +L RA  L +++    ES +++++ A E     +A           
Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357

Query: 356 PRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P   +  ++A+IE A +   + +   W   A  A  DP W++ DG +S  W P+SP+S  
Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416

Query: 415 LCYFEWKIPTKSPEYISSEN-----INFSLEMAYP 444
           L  F WK P   PE ++        +  S E A P
Sbjct: 417 LDAFVWKTP---PEILAGPEDDDAPVPASAEPAAP 448


>gi|254559413|ref|YP_003066508.1| hypothetical protein METDI0838 [Methylobacterium extorquens DM4]
 gi|254266691|emb|CAX22471.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 511

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 212/440 (48%), Gaps = 17/440 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWSGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + + PLA + H+    +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234
             ++P   W  EAV++      EWS A   + ++       K+A    R RA+LL A + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +  + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE
Sbjct: 236 QRHEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295

Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A +Y +L + ++   +L RA  L +++    ES +++++ A E     +A         
Sbjct: 296 LAKVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTD 355

Query: 354 IAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
             P   +  ++A+IE A +   + +   W   A  A  DP W++ DG +S  W P+SP+S
Sbjct: 356 DRPTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVS 414

Query: 413 KTLCYFEWKIPTKSPEYISS 432
             L  F WK P   PE ++ 
Sbjct: 415 GRLDAFVWKTP---PEILAG 431


>gi|163850175|ref|YP_001638218.1| HemY domain-containing protein [Methylobacterium extorquens PA1]
 gi|163661780|gb|ABY29147.1| HemY domain protein [Methylobacterium extorquens PA1]
          Length = 511

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 214/446 (47%), Gaps = 17/446 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + + PLA + H+    +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234
             ++P   W  EAV++      EWS A   + ++       K+A    R RA+LL A + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +  + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE
Sbjct: 236 QRHEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295

Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A +Y +L + ++   +L RA  L +++    ES +++++ A E     +A         
Sbjct: 296 LAKVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTD 355

Query: 354 IAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
             P   +  ++A+IE A +   + +   W   A  A  DP W++ DG +S  W P+SP+S
Sbjct: 356 DRPTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVS 414

Query: 413 KTLCYFEWKIPTKSPEYISSENINFS 438
             L  F WK P   PE ++    + S
Sbjct: 415 GRLDAFVWKTP---PEILAGPEDDDS 437


>gi|218528780|ref|YP_002419596.1| HemY domain protein [Methylobacterium chloromethanicum CM4]
 gi|218521083|gb|ACK81668.1| HemY domain protein [Methylobacterium chloromethanicum CM4]
          Length = 511

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 212/440 (48%), Gaps = 17/440 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + + PLA + H+    +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234
             ++P   W  EAV++      EWS A   + ++       K+A    R RA+LL A + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +  + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE
Sbjct: 236 QRHEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295

Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A +Y +L + ++   +L RA  L +++    ES +++++ A E     +A         
Sbjct: 296 LAKVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTD 355

Query: 354 IAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
             P   +  ++A+IE A +   + +   W   A  A  DP W++ DG +S  W P+SP+S
Sbjct: 356 DRPTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVS 414

Query: 413 KTLCYFEWKIPTKSPEYISS 432
             L  F WK P   PE ++ 
Sbjct: 415 GRLDAFVWKTP---PEILAG 431


>gi|319406345|emb|CBI79982.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
          Length = 481

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 216/480 (45%), Gaps = 20/480 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y F +  +   F   S+    + IT+    +  S   I+S L   L   + L+ 
Sbjct: 1   MIRIFIYIFAVCAIGAVFSWGSNNNNFLVITFLQMRFTVSLLTIISGLVILLTILVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+     R  + G KAL  GL+++ A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPGTLYSFFSGRYQEYGRKALIQGLLAVFAGDYIAAQKMEIRALKYLVKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +   T+   +Y L+ E+      + AQ YA +A
Sbjct: 121 LIKLLRAQILSLQKDSMKAIALYEEMQKEEPTKLAGLYGLFREAINTKAYDVAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENA 237
           L +SP   W  + V+ +     +W++A+   ++ ++   ++  +   R           A
Sbjct: 181 LALSPALSWAQQFVLDRLSAEGQWNKALDVFHRAQRALPHSDHYTSERKYTHALLLSGLA 240

Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
               +  ++ +    +++ KL  + +  ++     L    + RKA+ ++ K W+ NPHP+
Sbjct: 241 LHLIETQLMEARKAILKAHKLMPDFVPITVIMVDILYRLKEVRKADKMIIKAWQKNPHPD 300

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              +Y     E+ VG+LKRA  L   NK+  ES  IV+K AL+ G ++ A   A  A+  
Sbjct: 301 FGTLYLR-REESAVGRLKRAKTLASYNKDIFESSFIVAKAALDAGELELAREYAQRALTY 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
            PR+ ++LLLA IE+A   N      W   AL A  DP W   DG     W  +SPIS  
Sbjct: 360 HPRESVYLLLADIEEAQG-NGQGSRQWLSLALCAERDPAWAC-DGSFFPFWSAVSPISGR 417

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474
           L   EWK+P + P  I+ E  N    MA   +D +  +N  K      + K  SFE  ++
Sbjct: 418 LGRCEWKVPPRCPP-ITLEIDN----MALKKEDKKGPVNEKK------VIKDKSFEKKSL 466


>gi|92116186|ref|YP_575915.1| HemY-like [Nitrobacter hamburgensis X14]
 gi|91799080|gb|ABE61455.1| HemY-like protein [Nitrobacter hamburgensis X14]
          Length = 552

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 240/530 (45%), Gaps = 47/530 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R+I +  +I+L       V+     + ++W      T+       L   + A +L+++
Sbjct: 1   MFRIILFLVLIALAALGATWVADQTGTIVMSWDVWRVETTLPAFALGLGLLVVAVLLVWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +R   +G  A+  GL++I  H    A + H+ V+++   H E 
Sbjct: 61  IVRGLWQAPRRIRRARRERRNRRGRDAITRGLLAIG-HGDAAAARTHARVARRLVSH-EP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  +   + A      M +   TR   +  L+ E+ R  D  +A   A +A
Sbjct: 119 LTLLLHAQSAQLDGDADRAQRAFRAMAERADTRLLGLRGLFIEAQRADDPQAAVAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
           L +SP + W ++A +       +W+ A+  L++       +   + R R +LL AR+LE 
Sbjct: 179 LKVSPSSIWASQAALGFRCARGDWTGALAILDKNVAAGLIDKALYRRQRGVLLTARALE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +K D  AS +  +E++K     I A + A+K L   N+ R+A  I+E  W   PHP++A
Sbjct: 238 LEKSDRDASRNTVMEAVKYAPTLIPAVVLASKYLSEGNQMRRAMRIIETAWLAQPHPDLA 297

Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H++  ++   +L R   L E      ES + +++ A++     +A  + +  +  A
Sbjct: 298 DAYAHVMPGDSARERLARVETLAENASGHPESAMAIARAAIDASEFARAR-EVLEPLIAA 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE     ++ +   WT  A+ A+ DP+W + DGY+S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHNEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415

Query: 416 CYFEWK-----IPTKSPEYISSENINFSLEMAYPADDL-------QSMLNNGKKNHLP-- 461
             F+W+     +P+  P  + +E   FS ++A  A          QS   +G    +   
Sbjct: 416 DAFQWQAPLAALPSSRPALVEAE---FSDQIASDAPRFEALPAASQSAARDGDGATVAIE 472

Query: 462 ---------SIKKVSSFEDSTIHPLDPH-----------IRQPDDPGIKE 491
                    S +  +S    T   LD             +R PDDPG+ +
Sbjct: 473 SSSPETAAMSAEAATSTTFRTQSDLDKAGASDIPAVIAIVRAPDDPGVDD 522


>gi|217977723|ref|YP_002361870.1| HemY domain protein [Methylocella silvestris BL2]
 gi|217503099|gb|ACK50508.1| HemY domain protein [Methylocella silvestris BL2]
          Length = 516

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 205/451 (45%), Gaps = 35/451 (7%)

Query: 1   MLRLIRYFFV-ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYF------FLF 53
           M+R++ +  V I L I    ++   P ++ + W    Y+    V++ I          L 
Sbjct: 1   MIRVLLFLAVLIGLAIAEAWLIER-PGELVLNWQG--YKIETSVLMGIAAVFVAAAILLG 57

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
            W+LL    RF  + P+++      R  +KGY AL  G++++ A +   AR+  + V  Q
Sbjct: 58  LWMLL----RFIFNIPSLMALASRGRRREKGYAALSRGMIAVGAGDTQAARR--AAVEAQ 111

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               N+ L  LL+ Q A    +   A      M +    R   +  L+ E+ R GD+  A
Sbjct: 112 RMLPNDPLALLLKAQSAQLSGESGSAEAAFTEMTRRNDMRVLGLRGLHVEAERQGDVEKA 171

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAI 227
           Q YA  A +I+P  PW  +A     V A +W  A+  L          K  +E  R+RA+
Sbjct: 172 QHYAETAREIAP-LPWAAKANFAHKVAAGDWRGALALLESGAGSKHIDKTIRE--RSRAV 228

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L  A ++E AD      +   A  ++K     + A   AA+    Q   RKA  ++E  W
Sbjct: 229 LETAIAIEKAD-AQPAEALALARAAVKRAPTLVPAVALAARLTSEQGDARKAAKLIEAGW 287

Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               HP+IA IY  L   E++  +LKRA+ L ++     ES ++V++ A+  G    A  
Sbjct: 288 AGTHHPDIAKIYVGLYPGESSADRLKRAISLAQLAPREPESKIMVAEAAIAAGDFKAAR- 346

Query: 347 KAMLAMKIAPRK---EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS 403
           +AM  +   P +    +  L+A++E+        I  W   A  A PDP W++ DG  S 
Sbjct: 347 EAMQPLIEGPERPTARMCRLMAELEEKQHGAAGYIREWLTRASLAPPDPTWVA-DGVASD 405

Query: 404 VWLPLSPISKTLCYFEWKIPTKSPEYISSEN 434
            W P+SP++  L  F W+ P    E +SS N
Sbjct: 406 QWRPISPVTGKLDAFVWQKPV---ERLSSGN 433


>gi|312114938|ref|YP_004012534.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311220067|gb|ADP71435.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 524

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 225/491 (45%), Gaps = 32/491 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RLI YF +I LV   F  ++  P +V+I W     +TS F+    L   L A++++F 
Sbjct: 1   MTRLIGYFVIIVLVAVGFAWIADRPGNVTIQWLGYDIQTSVFIGSVAL---LLAFVIVFL 57

Query: 61  VSRFFLSC---PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
           +    L     P      + +R    G +A+  G+ +  A +   A K  +    + T  
Sbjct: 58  LGWLGLLTWTGPKKFRGRMQRRRQRVGQEAVRRGIFAAGAGDKSAALKADAIA--RRTVP 115

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           NE L  LL+ Q A        + +  E ML+ P   E  +  LY E+ +     +A+++A
Sbjct: 116 NEPLALLLQAQSAQLNEDSIASRQAFERMLEKPEMAELGLRGLYMEAKKANQNEAAKQFA 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AK-EWNRNRAILLIARS 233
            +AL  +P   W + A+ +      +W  A+  L   K++   AK E +R R++LL   +
Sbjct: 176 ERALAANPALAWSSSALFEIQSREGDWRAALKTLQIAKEHRHLAKPEADRRRSLLLTQLA 235

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +E  D     A  + A E+  L    I A++ A + L +Q +  +A  IL + W+   HP
Sbjct: 236 IELEDSQPSKALAY-ATEAFDLSPTLIPAAVVAGRILTTQGQTSRATKILTQAWRSTQHP 294

Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           EIA  + H    ++   +L R   L     +++E  V V+  A++     Q    A LA+
Sbjct: 295 EIALTFAHARRGDSPRDRLARVKSLVAAGSQTLEGAVAVAVSAIDA----QEWKTARLAL 350

Query: 353 KI----APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408
           +      P   +  L+A+IE   + ++ +   W   A    PDP+W++ DG +S+ W P+
Sbjct: 351 EPYLANNPPARVCRLMARIEAGQNRDSGRAREWLAKAARGAPDPVWVAPDGTVSAEWQPI 410

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLP-SIKKVS 467
           SP +  L  FEWK P   P   S+   +F+ E++  A D+ S+    +   LP S  K  
Sbjct: 411 SPTTGALGSFEWKTP---PANASANPDDFAAEIS--ALDVVSL----EGESLPDSYAKTK 461

Query: 468 SFEDSTIHPLD 478
                +  P+D
Sbjct: 462 GLSGRSNEPVD 472


>gi|146337456|ref|YP_001202504.1| putative signal peptide;putative HemY porphyrin biosynthesis
           protein [Bradyrhizobium sp. ORS278]
 gi|146190262|emb|CAL74256.1| conserved hypothetical protein; putative signal peptide;putative
           HemY porphyrin biosynthesis protein [Bradyrhizobium sp.
           ORS278]
          Length = 644

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 210/436 (48%), Gaps = 20/436 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59
           M R++ +  ++ L       V+    DV + WG  R+  T P  +L+ L   + A +L++
Sbjct: 1   MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLA-LGLTIAACVLVW 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +    L  P  +     +R + +G  A+  GL++I  H    A + H+ ++++    ++
Sbjct: 60  NLLSALLRAPNRIRKAHRERRHRRGRHAITHGLLAIG-HGDSTAARQHADMAKRLA-GDD 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A  E   + A      M +   TR   +  L+ E+ R  D  +A   A +
Sbjct: 118 PLTLLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFIEAQRADDAMAAVVIADE 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSL- 234
           AL ++P+A W + AV+       +W+ A++ L+        +   + R R +LL AR++ 
Sbjct: 178 ALKLAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMA 237

Query: 235 ---ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              EN D      +   A+E++KL    + A++ AAK     ++ R+A  I+E  W   P
Sbjct: 238 LETENRD-----LARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCP 292

Query: 292 HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           HP++A+ Y H+ L ++ V +L R   L       VE  + V++ A++     +A A A+ 
Sbjct: 293 HPDLADAYAHVRLGDSAVQRLSRITNLAARTPNHVEGALAVARAAIDAAEFGRARA-ALA 351

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
                P + + +L+A++E+    +  K   WT  A+ A  DP W + DGY+S  W P+SP
Sbjct: 352 PFTEDPTQRVAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTA-DGYVSDRWRPISP 410

Query: 411 ISKTLCYFEWKIPTKS 426
           ++  L  F+W+ P  S
Sbjct: 411 VTGRLDAFQWQTPVAS 426


>gi|316931768|ref|YP_004106750.1| HemY domain-containing protein [Rhodopseudomonas palustris DX-1]
 gi|315599482|gb|ADU42017.1| HemY domain protein [Rhodopseudomonas palustris DX-1]
          Length = 565

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 216/435 (49%), Gaps = 18/435 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPF---VILSILYFFLFAWI 56
           MLR++ +  +I+L       V+  P +V ++W + R   T P     + + +   + AW 
Sbjct: 1   MLRIVLFLVIIALAAAGAAWVAEQPGEVVLSWNDWRASMTLPVFAAALGAGVVAVMLAWA 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           ++  V R     P  +      R  ++   A+  GL+++  H    A + H+  +++H  
Sbjct: 61  IVLGVVR----APGWMKRGRSSRRSERARNAITQGLLAVG-HGDSAAARAHANAARRHAP 115

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           H+  L  LL+ Q A  E     A      M     T+   +  LY E+ R  D  +A   
Sbjct: 116 HDP-LALLLQAQSAQLEGDREGARRAFLAMASRKDTKSLGMRGLYIEAQRADDPYAALAI 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232
           A +AL + P+  W ++AV+       +W+ A+  L +       + K + R RA+LL AR
Sbjct: 175 AEEALRLQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTAR 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++ + ++ D   +   A+E+ KL    + A++ AAK L   ++ R+A  ++E  W+  PH
Sbjct: 235 AI-DLEESDESLARDSALEANKLAPTLVPAAVLAAKHLAGAHQVRRAMKVIEAAWQAQPH 293

Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           PE+A+ Y +L   +T   +L R   L     + +ES V +++ A++ GS  +A       
Sbjct: 294 PELASTYANLKPGDTATARLGRVENLVGKGPQQLESAVAIARAAIDAGSFGRARTALEPY 353

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
           +++ P + + +L+A+IE  +  +T K   WT  A+ A+ DP+W + DGY+S  W P+SP+
Sbjct: 354 LEM-PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPV 411

Query: 412 SKTLCYFEWKIPTKS 426
           +  L  F+W++P  +
Sbjct: 412 TGRLDAFQWQVPVSA 426


>gi|85713683|ref|ZP_01044673.1| HemY protein [Nitrobacter sp. Nb-311A]
 gi|85699587|gb|EAQ37454.1| HemY protein [Nitrobacter sp. Nb-311A]
          Length = 577

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 243/527 (46%), Gaps = 42/527 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59
           MLR+I +  +I+L       ++     + ++W   R+  T P   L  L   + A +L++
Sbjct: 27  MLRIILFLVLIALSALGASWIADQTGTIVLSWDVWRIETTLPVFALG-LGLLVVASLLVW 85

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           +  R     P  L      R   +G  A+  GL++I  H    A + H+ V+++     +
Sbjct: 86  SAVRGLWQAPTRLRRARRARRTARGRDAITRGLLAIG-HGDATAARNHARVARR-LVSQD 143

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A  +   + A      M +   TR   +  L+ E+ R GD  +A   A +
Sbjct: 144 PLALLLHAQAAQLDGDADRAQRVFRTMAERADTRLLGLRGLFIEAQRAGDPAAAVAIAEE 203

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235
           AL  SP + W ++A +       +W+ A+  L++   + +     + R R +LL AR+LE
Sbjct: 204 ALKTSPSSIWASQAALGFRCARGDWAGALAILDRNAASGRIDKALYRRQRGVLLTARALE 263

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             +  D   S    +E++K     + A + A+K L   N+ R+A  ++E  W   PHP++
Sbjct: 264 -LETSDRDLSRQTVMEAVKFAPTLVPAVVLASKYLSEANQMRRAMRMIETAWLAQPHPDL 322

Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A+ Y H++  ++ + +L R  +L E      ES + +++ AL+     +A   A+  +  
Sbjct: 323 ADAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAALDASEFARAR-DALEPLIA 381

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           AP + + +L+A+IE +   ++ +   WT  A+ A+ DP+W + DGY+S  W P+SP++  
Sbjct: 382 APTQRVAMLMAEIEHSEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGR 440

Query: 415 LCYFEWK-----IPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL-----PSIK 464
           +  F+W+     +P+  P  + ++  +   E     + L +    G+         P+  
Sbjct: 441 VDAFQWQTPLAALPSSRPPLVEADVSDQIAEETPRVEALPAASPGGESKAQDDAMSPADV 500

Query: 465 KVSSF------EDSTIHPLD--------------PHIRQPDDPGIKE 491
           + +SF      +++   P+               P +R PDDPG+ +
Sbjct: 501 EAASFGTIPMPDETAASPISHTEEDKPGAIPDVIPIVRAPDDPGVDD 547


>gi|218679767|ref|ZP_03527664.1| putative transmembrane protein [Rhizobium etli CIAT 894]
          Length = 280

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 138/266 (51%), Gaps = 16/266 (6%)

Query: 47  ILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKM 106
           + +F    W    +V+R+F +           R  D+GY+AL TGL++  A N  LARKM
Sbjct: 27  VWWFIRLVWTSPHSVTRYFRA-----------RKRDRGYQALSTGLIAAGAGNALLARKM 75

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            +          E L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R
Sbjct: 76  AARSRGLIRADQEPLINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARR 135

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWN 222
           +G   +A++YA KA D +P  PW  +A ++    A  W  AI  L Q+K        E N
Sbjct: 136 LGANEAARQYAEKAADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEAN 195

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           R  A+LL AR+ E  + G+   +  DA+++LKL  + I A++ AAK+L  +   RKA  I
Sbjct: 196 RLHAVLLTARAGERLE-GNPAGARDDALQALKLAADFIPAALIAAKALFREGGLRKAASI 254

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTV 308
           LE+ WK  PHPEI   Y    S ++ 
Sbjct: 255 LEQAWKSAPHPEIGQAYVRARSGDST 280


>gi|90421577|ref|YP_529947.1| HemY-like [Rhodopseudomonas palustris BisB18]
 gi|90103591|gb|ABD85628.1| HemY-like [Rhodopseudomonas palustris BisB18]
          Length = 561

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 236/539 (43%), Gaps = 57/539 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW----GNRLYRTSPFVILSILYFFLFAWI 56
           MLR+I +  VI+        ++  P +V ++W           +   +LS +      W 
Sbjct: 1   MLRIILFLVVIAAAAAGAGWLAEQPGNVVLSWRGWQAEMTLAVAALALLSAIVAVALGWT 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           +L  V    L  P  L      R   +  +A+  GL+++  H      + H+  +++H  
Sbjct: 61  ILAGV----LRSPGRLRRSRRARREARARRAITQGLLAVG-HGDAAIARAHANAAKRHAP 115

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            +  L  LL+ Q A  +   + A      M     T+   +  L+ E+ R  D  +A   
Sbjct: 116 QDP-LALLLQAQSAQLDGDRDGAKRAFLAMAGRDDTKSLGMRGLFIEAQRAEDPYAALTI 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIAR 232
           A +AL +SP + W ++AV+       +WS A+    T L     + K + R R +LL AR
Sbjct: 175 AEEALRLSPASSWASQAVLGFRCARGDWSGALEILETNLTSGLIDKKTYRRLRGVLLTAR 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++E  ++ D+  S   A+E++KL    + A++ A+K L   ++ R+A   +E  W  +PH
Sbjct: 235 AIE-CEETDVSLSRDSALEAVKLAPTLVPAAVLASKYLSEAHQIRRAMKTIETAWLAHPH 293

Query: 293 PEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           P++A  Y H+   ++   +L+R   L        E  V V++ A++ G  ++A   A++ 
Sbjct: 294 PDLAEAYAHIKPGDSAQVRLQRVEALAAKASGDTEGAVAVARAAIDAGDFNRARG-ALMP 352

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
              AP + + +L+A+IE     ++     WT  A+ A+ DP+W + DG +S  W P+SP+
Sbjct: 353 FVDAPTQRVAMLMAEIEHTERKDSRSARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPV 411

Query: 412 SKTLCYFEWKIP---------------------TKSP-----EYISSENINFSLEMAYP- 444
           +  L  F+W  P                      +SP     E ++SE     +  A P 
Sbjct: 412 TGRLDAFQWTTPLAELPTNKAVVLESDLFDETLIESPTEEVTEGVTSEPATPEVSKAEPS 471

Query: 445 -----ADDLQSMLNNGKKNHLPSIKKVSSF-------EDSTIHPLDPHIRQPDDPGIKE 491
                   ++ ++ +      P +    S        + S   P+ P +R PDDPGI E
Sbjct: 472 KPETSGTPVEVVMESKPAAEAPVVGPTESSPPLFHRPQRSAAAPVIPIVRAPDDPGIDE 530


>gi|158421882|ref|YP_001523174.1| putative HemY protein [Azorhizobium caulinodans ORS 571]
 gi|158328771|dbj|BAF86256.1| putative HemY protein [Azorhizobium caulinodans ORS 571]
          Length = 532

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 205/433 (47%), Gaps = 20/433 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWILLF 59
           M+RL+ +  V++ +      ++  P ++ + W G R+  T P V L+ L  F  A ++++
Sbjct: 1   MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVP-VALAALAAFSVALLIVW 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +    L  P M+     +R  +KG+ A+  GL++I + +  L     +          E
Sbjct: 60  HLGALLLRSPRMIATFSRRRRREKGWAAVSRGLVAIGSGD--LDAARRARAEALRYLPKE 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A A    + A      ML  P TR   +  L+ E+ R GD+ +A+  A +
Sbjct: 118 PLTQLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHMEARRSGDIAAARMLAEE 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235
           A + SP   W  +AV++      +++ A   L ++  +      ++ R RA+LL A    
Sbjct: 178 AANQSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAVLLAA-EAL 236

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             ++ D   +   A+E+++L    + A+  A + L +  + RKA  I+E  +   PHPE+
Sbjct: 237 ALEQTDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPEL 296

Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAMLA 351
           A +  HL   +  + +LKR   L     +  ESL     IAL   +ID    A A+A+L 
Sbjct: 297 AQVAAHLRPGDAALDRLKRIRTLAAKAPDHAESL-----IALAHATIDANEFAEARALLQ 351

Query: 352 -MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410
            +   P + + LL+A++E +   +  K   W   AL A  DP WI+ DG +   W P+SP
Sbjct: 352 RLSAEPTQRVCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIA-DGRVFDAWAPVSP 410

Query: 411 ISKTLCYFEWKIP 423
           ++  L  F W +P
Sbjct: 411 VTGKLDAFVWAVP 423


>gi|154245109|ref|YP_001416067.1| HemY domain-containing protein [Xanthobacter autotrophicus Py2]
 gi|154159194|gb|ABS66410.1| HemY domain protein [Xanthobacter autotrophicus Py2]
          Length = 567

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 201/409 (49%), Gaps = 12/409 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++  P +V++ W    Y T+  V L+++       ++L+ +    +  P ++     +R 
Sbjct: 21  LADRPGEVTVVWEGVAYGTTVPVALAVIAVVAGLILILWRILSLLVRSPKIIAAFSRRRR 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            +KG+ A+  GL+++   +    R+     ++     +E L +LL  Q A  + ++ +A 
Sbjct: 81  REKGWNAVTRGLLAVGIGDNAAVRQARHDAAR--LLPHEPLTHLLTAQAAQLDGKHEVAV 138

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                M+  P TR   +  L+ E+ + GD  +A   A +A   +P   W  +AV++    
Sbjct: 139 AAFRAMVDKPETRLLGLRGLHMEARKAGDKVAAYAIAEEAASAAPTLGWAADAVIEARCA 198

Query: 201 AKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           A +++ A   L +    K  +  ++ R +A+LL A ++   +  D + +   A+E+++L 
Sbjct: 199 AGDYAGARGVLERQMALKGIDKAQYRRRKAVLLAAEAI-ALEHSDPLVAREKAVEAVRLA 257

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRAL 315
              + A+ CA + L +  + RKA  ++E  +  NPHPE+A++  +L   +    +LKR  
Sbjct: 258 PTLVPAAACAGRLLGAAGELRKAAKVVETAFATNPHPELADVEAYLRPGDAAQDRLKRIR 317

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHN 374
            L        ES + +S+ A++     Q  A+ +L   +A P + + LL+A++E A   +
Sbjct: 318 TLVNRAPSHRESAIALSRAAIDAHEFRQ--ARLVLEPLLAEPSQRVCLLMAELEAAEHAD 375

Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423
             K   WT  A+ A  DP WI+ DG +S  W  +SP+S  L  F W++P
Sbjct: 376 IGKAREWTARAVRAHRDPAWIA-DGVVSDAWAAVSPVSGKLDAFVWEVP 423


>gi|170742656|ref|YP_001771311.1| HemY domain-containing protein [Methylobacterium sp. 4-46]
 gi|168196930|gb|ACA18877.1| HemY domain protein [Methylobacterium sp. 4-46]
          Length = 528

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 208/427 (48%), Gaps = 13/427 (3%)

Query: 19  IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78
           + ++ +P  VS++WG     TS    L  +         L++++R  L  P  +    H+
Sbjct: 19  VWLADHPGVVSVSWGGVDVATSLNAALVGVLVLAVVLGFLWSLARGVLRLPRRMRASSHE 78

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           R   +G++AL  G++++ + + P A + H+  +++    +E L  LL  Q A        
Sbjct: 79  RRRTRGFEALSRGMVAVGSGD-PAAARRHAGEAER-LLGSEPLALLLTAQAAQISGDRAG 136

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A      M +   TR   +  L+ E+ R GD  +A+ YA +A  ++P   W  EAV++  
Sbjct: 137 AERAFRRMTEASETRVLGLRGLFVEARRQGDEATARAYAAEASRLAPGVSWANEAVMEAQ 196

Query: 199 VLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              ++W+ A+  ++++      +     R RA+LL A S +  + GD   +   A E+++
Sbjct: 197 CADRDWAGALETVSRRAALGLADKAASRRQRAVLLTA-SAQELEAGDPERALAQAREAVR 255

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKR 313
           L  + + A++ A + L  + + +KA  ++E  WK  PHP++A +Y  L   +++  +L R
Sbjct: 256 LAPDLVPAAVVAGRLLSRRAELKKAARVIEAAWKAGPHPDLARVYLDLRPGDSSRDRLAR 315

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA-NS 372
           A  L  ++    E+   +++ ALE     +A       +  +P +  +LL+A+IE+  + 
Sbjct: 316 AETLARLSSWHPEARFAIARAALEAREFGRARDVLQPLLAESPTQRAYLLMAEIEETEHG 375

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISS 432
             + +   W   A HA  DP W + DG +S  W P+SP+S  L  F W+ P   PE ++ 
Sbjct: 376 RGSGRAREWLSRAAHAPRDPAWCA-DGIVSDRWAPISPVSGRLDAFVWQTP---PELLAG 431

Query: 433 ENINFSL 439
            + +  L
Sbjct: 432 RSQDLPL 438


>gi|115522092|ref|YP_779003.1| HemY domain-containing protein [Rhodopseudomonas palustris BisA53]
 gi|115516039|gb|ABJ04023.1| HemY domain protein [Rhodopseudomonas palustris BisA53]
          Length = 577

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 204/432 (47%), Gaps = 18/432 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS----PFVILSILYFFLFAWI 56
           MLR+I +  VI+L       ++  P +V ++W       S      V+  IL   L AW 
Sbjct: 1   MLRIILFLVVIALAATGAAWLAEQPGNVVLSWNGWQAEASLAVFSMVVGGILVSVLLAWA 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           ++  + R     P  L     +R   +   A+  GL+++  H      + H+  +++H+ 
Sbjct: 61  IITGLWR----SPRRLARSRRERKLARARHAVTQGLLAVG-HGDAAIARAHANAARRHS- 114

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            N+ L  LL+ Q A  +     A      M     T+   +  L+ E+ R  D  +A   
Sbjct: 115 PNDPLALLLQAQAAQLDGDREGAKRAFLAMASRDDTKSLGMRGLFIEAQRAEDPYAALTV 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232
           A +AL +SP + W   AV+       +WS A+  L     +     K + R R +LL AR
Sbjct: 175 AEEALRLSPGSHWAAHAVLGFRCARSDWSGAMDILENNLASGLIDKKTYRRQRGVLLTAR 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++E  D  D+  +   A+E++KL    + A++ AAK +   ++ R+A  I+E  W  +PH
Sbjct: 235 AIECED-ADVSVARDSALEAIKLVPTLVPAAVLAAKYMSEAHQLRRALKIIEAAWIAHPH 293

Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           P++A  Y H+   ++   +L R   L       +E  + +++ A++     +A   A+  
Sbjct: 294 PDLAEAYAHIKQGDSAQARLSRIETLAAKAPGHIEGALAIARAAIDASDFTRAR-NALAP 352

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
              AP + + +L+A+IE A+ +++     WT  A+ A+ DP+W + DG +S  W P+SP+
Sbjct: 353 YVEAPTQRVAMLMAEIEHADRNDSRAARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPV 411

Query: 412 SKTLCYFEWKIP 423
           +  L  F+W  P
Sbjct: 412 TGRLDAFQWTSP 423


>gi|220924339|ref|YP_002499641.1| HemY domain-containing protein [Methylobacterium nodulans ORS 2060]
 gi|219948946|gb|ACL59338.1| HemY domain protein [Methylobacterium nodulans ORS 2060]
          Length = 507

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 205/415 (49%), Gaps = 14/415 (3%)

Query: 19  IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF--AVSRFFLSCPAMLFHML 76
           + ++ +P  V++TW    Y  +  +  +++   +FA IL F  A +R  L  P  L    
Sbjct: 19  VWLADHPGVVTVTWSG--YEVATSLAAALVGVLIFAVILGFVWAFTRGILRFPHRLRVRN 76

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R   +GY+AL  G++++ + + P A + H+  + +    +E L  LL+ Q A      
Sbjct: 77  RARRRARGYEALSRGMVAVGSGD-PAAARRHAGEAAR-LLGDEPLALLLKAQAAQISGDR 134

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A      M + P TR   +  L+ E+ R GD  +A+ YA +A  ++P   W  EAV++
Sbjct: 135 AGAENAFRRMTEEPETRVLGLRGLFVEARRQGDEATARAYAAEAARLAPGVSWANEAVLE 194

Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                ++W+ A+  ++++      +     R RA+LL A +LE  + GD   +   A E+
Sbjct: 195 AQCADRDWNNALETVSRRASLGIADKTAARRQRAVLLTASALE-LEAGDPERALAQAREA 253

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKL 311
           +KL  + + A+  A +    +   ++A  ++E  WK +PHP++A +Y  L   +++  +L
Sbjct: 254 VKLAPDLVPAAAVAGRLFARRADLKRAARVVEAAWKASPHPDLARVYLDLRPGDSSRDRL 313

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA- 370
            RA  L  ++    ES   +++ ALE     +A       +   P + ++L++A+IE+A 
Sbjct: 314 ARAETLARLSSWHPESRFAIARAALEAREFGRARDVLSPLLADNPTQRVYLMMAEIEEAE 373

Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK 425
           +   + +   W   A HA  DP W + DG +S  W P+SP+S  L  F W+ P +
Sbjct: 374 HGRGSGRAREWLARAAHAPRDPAWCA-DGIVSDRWAPVSPVSGRLDAFVWQTPPE 427


>gi|75674672|ref|YP_317093.1| HemY protein [Nitrobacter winogradskyi Nb-255]
 gi|74419542|gb|ABA03741.1| HemY protein [Nitrobacter winogradskyi Nb-255]
          Length = 555

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 240/532 (45%), Gaps = 47/532 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59
           MLR+I +  +I+L       ++     + ++W   R+  T P   L  L   + A +L +
Sbjct: 1   MLRIILFLVLIALSALGATWIADQTGTIVLSWDVWRIETTIPVFALG-LGLLIVASLLAW 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           +V       P  +     +R   +G  A+  GL++I   +   A   +   + +    N+
Sbjct: 60  SVVHGLWQAPTRMRRARRERRIARGRDAITRGLLAIGYGDA--AAARNHAKAARRLVSND 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A  +   + A      M +   TR   +  L+ E+ R GD  +A   A +
Sbjct: 118 PLALLLHAQAAQLDGDADRAQRAFRTMAERNDTRLLGLRGLFIEAQRAGDPAAAVAIAEE 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235
           AL  SP + W ++A +       +W+ A+  L++   + +     + R R +LL AR+LE
Sbjct: 178 ALKTSPSSIWASQAALGFRCARGDWTGALAILDKNVASGRIDKALYRRQRGVLLTARALE 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             +K D   S    +E++K     I A + A+K L   N+ R+A  ++E  W   PHP++
Sbjct: 238 -LEKSDRDLSRQTVMEAVKFAPTLIPAVVLASKYLSEANQMRRAMRLIETAWLAQPHPDL 296

Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A+ Y H++  ++ + +L R  +L E      ES + +++ A++      A A+ +L   I
Sbjct: 297 ADAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAAIDASEF--ARAREVLEPLI 354

Query: 355 -APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
            AP + + +L+A+IE     ++ +   WT  A+ A+ DP+W + DGY+S  W P+SP++ 
Sbjct: 355 AAPTQRVAMLMAEIEHNERGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPLTG 413

Query: 414 TLCYFEWK-----IPTKSPEYISSENIN---------FSLEMAYPADDLQS--------- 450
            +  F+W+     +P+  P  + +E  +          +L  A   +D ++         
Sbjct: 414 RVDAFQWQTPLSALPSSRPPLVEAEVSDQIAEDAPRVEALPAATSTEDFKAQDGAIPPAG 473

Query: 451 -------MLNNGKKNHLPSIKKVSSFED---STIHPLDPHIRQPDDPGIKEQ 492
                   ++   +    S     S ED     I  + P +R PDDPG+ + 
Sbjct: 474 VEASSSGTISMPDETATASADYTPSEEDNKPGAIPDVIPIVRAPDDPGVDDD 525


>gi|154251805|ref|YP_001412629.1| HemY domain-containing protein [Parvibaculum lavamentivorans DS-1]
 gi|154155755|gb|ABS62972.1| HemY domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 512

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 207/445 (46%), Gaps = 28/445 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR +  F +++++    I ++  P D+ + W     RTS  V + ++    F  +L + 
Sbjct: 1   MLRALYIFLIVAVLSGIAIWLADNPGDLIMHWRGYEIRTSFVVGVGVMALAAFLVLLAYR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +   F+  PA +   L KR   KG+ AL  G++++AA +   A++   Y +Q H   +  
Sbjct: 61  IIVSFIETPASVSAYLEKRRQQKGFLALSRGMVAVAAGDAADAKR---YAAQAHKLLDAP 117

Query: 121 -LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A  E     A    E ML  P T    +  L+ ++ R GD + A  +A +
Sbjct: 118 PLTLLLAAQAAQLEGNEAAATAYFEQMLAAPETEFLGLRGLFIQARRAGDRDGALAHARR 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLE 235
           A ++ P  PW  +AV +     ++W  A+  L++    K     E  R RA+LL AR++ 
Sbjct: 178 AFNLRPQTPWAAQAVFEIEAAEEDWDAALETLDRVVSAKLIPRDEARRRRAVLLTARAMT 237

Query: 236 NADK--GDMIASYHDAIE-SLKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEK 285
            A+   G +      A+E + KL   ++        A   AA+      + RK   ++E 
Sbjct: 238 AAEAAYGQVGEGRTSALEKATKLSLEAVSLEPKFPPAVALAARLCGETGRARKGMKLIED 297

Query: 286 IWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            W   PHP++A+++  ++  E+   +  RA  L   N + +ES ++V++ A+  G+ D A
Sbjct: 298 AWSDAPHPDLADVWLDMIEGESGYDRATRARVLASRNVDHIESRILVARGAI--GARDWA 355

Query: 345 HAKAMLA------MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398
            A+  L        K  P + I  L+A+IE+    +      W   ALHA  DP W +  
Sbjct: 356 AAREALVPYTGAEAKEVPTQCICELMAEIEEGEFGDRGASRSWLTRALHAPADPQW-TGT 414

Query: 399 GYLSSVWLPLSPISKTLCYFEWKIP 423
           GY S  W P++P++      EW  P
Sbjct: 415 GYRSPRWSPVNPVTGEFDALEWSAP 439


>gi|170748490|ref|YP_001754750.1| HemY domain-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170655012|gb|ACB24067.1| HemY domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 536

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 190/409 (46%), Gaps = 10/409 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++  P  V++ W      TS  V L  +        LL+A+ R  +  P  L     +R 
Sbjct: 21  IADRPGTVTVVWNGYQIGTSLAVALVGVIAAAIVLGLLWAIVRGVIGLPEALVRGSAERR 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             KG  AL  G++++ + + PLA + ++    +     E L  LL+ Q A      + A 
Sbjct: 81  RAKGLSALSRGMVAVGSGD-PLAARRYAG-DAERLLGTEPLTLLLKAQAAQISGDRDAAE 138

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
              + M+  P TR   +  L+ E+ R  D  +A+ YAT+A  ++P   W  EA+++    
Sbjct: 139 SAFQRMVDDPETRVLGLRGLFVEARRREDETAARAYATEAARLAPSVTWANEALLEAQSA 198

Query: 201 AKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +W+ A+  + ++      +     R RA+LL A + E  + G+   +    ++++KL 
Sbjct: 199 DGDWAAALETIERRSSLGLIDKAAARRQRAVLLTAIAGER-EAGEPELATERVLQAVKLA 257

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRAL 315
            + + A+  A + L  +   +KA  I+E  WK NPHP++A +Y  L   ++V  +L RA 
Sbjct: 258 PDLVPAACIAGRLLARRGDVKKAARIVEAAWKANPHPDLAKVYLGLRPGDSVRDRLARAE 317

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN-SHN 374
            L +++    ES + + + AL+     +A       +   P     L++A IE+A     
Sbjct: 318 VLAKLSVWDPESRLALGQAALDARDYKRAREAVKPLLSDRPTARACLMMAAIEEAEHGAA 377

Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423
           + +   W   A  A  D +WI+ DG  +  W P+SP++  L  F W+ P
Sbjct: 378 SGQAREWLARAARAPRDRVWIA-DGIATDTWAPVSPVTGRLDAFAWREP 425


>gi|296444989|ref|ZP_06886950.1| HemY domain protein [Methylosinus trichosporium OB3b]
 gi|296257410|gb|EFH04476.1| HemY domain protein [Methylosinus trichosporium OB3b]
          Length = 466

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 191/435 (43%), Gaps = 29/435 (6%)

Query: 24  YPEDVSITWGNRLYRTSPFV----ILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
           +P  +++ WG     TS  V     L ++   + AW +L +    F   P  L      R
Sbjct: 24  HPGSITLDWGGYHIETSLLVAIAATLGLIALVIIAWAILVS----FFQAPTRLAQSSRSR 79

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             +KG++AL  G+++  A ++  A+K       +     E L +LL+ Q+A  E     A
Sbjct: 80  RREKGFQALSRGIIAAGAGHVGAAKKASKEA--EKCLAKEPLTFLLKAQVAQLEGDRVGA 137

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                 M  +  TR   +  L+ E+ R  D  +A  +A +A  ++P  PW   A+++ + 
Sbjct: 138 ETAFHEMTLLSETRLLGLRGLHIEAKRRNDAEAAHLFADQAHQLAP-VPWAGHALLEHHG 196

Query: 200 LAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +W  A       L  K  +     R RA++  A ++E        A  H A +++K 
Sbjct: 197 SNADWEEARVAIEANLKAKAIDLPTAQRLRAVVETALAMEKQVDSPSEA-LHLARQAVKR 255

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRA 314
               + A     + L       KA  +LEK +  NPHP+I   Y     SE+   +L R 
Sbjct: 256 APTLVPAIALIGRLLARHGDSAKALKLLEKAYAENPHPDIVAAYLDASPSESNAERLARV 315

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLLAQIEQA 370
            +L     ++ ES VIV++ AL   + D A A+  LA  +    AP  +I LL+A++E A
Sbjct: 316 KKLALAAPKAPESGVIVARAAL--AARDFAMARRALAPLVAEGQAPTAQICLLMAEVEDA 373

Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYI 430
            +  +  +  W      A  DP WI+ DG +S  W P SP++  L  F W  P   PE I
Sbjct: 374 ENGPSGPVREWLARGSRAPRDPAWIA-DGVISRSWAPASPVTGKLDAFVWTTP---PEPI 429

Query: 431 --SSENINFSLEMAY 443
              +E+    +  A+
Sbjct: 430 RGPAEDARAGIPAAF 444


>gi|288957242|ref|YP_003447583.1| hypothetical protein AZL_004010 [Azospirillum sp. B510]
 gi|288909550|dbj|BAI71039.1| hypothetical protein AZL_004010 [Azospirillum sp. B510]
          Length = 449

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 205/452 (45%), Gaps = 12/452 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R + +   +++VI   I ++  P  VS+ W         +V L +L   L    L + 
Sbjct: 1   MIRALWFLLKLAVVIAIAIWLADRPGSVSVHWLGYAVEAPFWVALLVLLAALGLAALGYR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  +  P  L      R  ++GY+AL  G+++IAA + P ARKM     +     NE 
Sbjct: 61  LLRGTIRLPQRLRRHSRARRRERGYRALTQGMVAIAAGDAPTARKM---ARKADVLLNEP 117

Query: 121 -LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A  +     A +    ML+ P T    +  L  ++ + GD   A   A K
Sbjct: 118 PLTMLLSAQAAQLQGDERAAKQYFTAMLERPETAFLGMRGLLTQAIKSGDRVEALTLARK 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLE 235
           A  + P+ PW+   +      A +W+ A   L Q  +      +E  R+R +LL+ RS E
Sbjct: 178 ARGLQPNTPWLLGTLYDLEARAGDWAAAEGTLQQAIQAGAMPTEEGRRHRVVLLLERSFE 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              +G   A+   A  +  L      A++  A+  ++ ++ + A  ++E+ W+  PHPE+
Sbjct: 238 AERRGRADAALSHAQAAHDLMPGFAPAAVRLARLQVAADRLKPAAKVVERAWRHEPHPEL 297

Query: 296 ANIY-THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A+IY T + S + + +++   +L     +S ES + V++ A++     +A      AM+I
Sbjct: 298 ADIYGTIVASYDALTRVRLFQKLVRQAPDSAESHLAVARAAIDAQLWGEARQHLERAMEI 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISK 413
            P +  + L+A +++   H+ +    W   A +A  DP+W     G +S  W  L     
Sbjct: 358 GPTRRTYRLMAALDRGERHDEEVAKDWLAKAANAPEDPVWTCGSCGAVSHNWGGLCGHCG 417

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPA 445
                 WK PT +   + + ++  +L  A PA
Sbjct: 418 AFDSLSWKAPTVAVPLMEATDLPPAL--ARPA 447


>gi|209965650|ref|YP_002298565.1| HemY domain protein [Rhodospirillum centenum SW]
 gi|209959116|gb|ACI99752.1| HemY domain protein [Rhodospirillum centenum SW]
          Length = 472

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 194/438 (44%), Gaps = 24/438 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +F  I L+I   I ++  P  VSI + + +     + +L  L   + A ++L+ 
Sbjct: 1   MRRAVFFFIKIGLLIALAIWLARNPGSVSIQFQDWMVDMPFWAMLLALAVIIVASVVLYR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE- 119
           V  F +  PA           ++GY AL  G++++AA +   A +   +  +  T  NE 
Sbjct: 61  VFSFVVGGPAAFARSRQAAKRERGYHALTQGMVAVAAGDREAASR---FARKADTLLNEP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A        A +  + MLQ P T    +  L  ++ + GD   A + A +
Sbjct: 118 PLTLLLSAQAAQLAGDDMAARKYFQSMLQRPETEFLGLRGLLTQALKGGDRTEALKLARR 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLE 235
           A +I P A W   A+++       W +A   L++    K    +   R+R  LL+ R+  
Sbjct: 178 AAEIQPKAQWPVLALMELEAKEGHWKQAEEALDRATATKALPQETLRRHRVALLVERART 237

Query: 236 NADKG---DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-ILEKIWKVNP 291
              +G   D +A    A E +    + + A++  A +L +Q   RKA    +E+ WK+ P
Sbjct: 238 AVAEGRSKDALALAQRANEQMP---SHVPAAVLVA-TLRAQAGNRKAATRAIEEAWKIAP 293

Query: 292 HPEIANIYTHLLSENTVG-----KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           HPE+A  +  + +    G      +KR   L  ++  +  + V + +  L     DQA  
Sbjct: 294 HPELAEAWGRIEAIFRPGIDPASLVKRYEALVALDPRAAAAYVALGEACLRADLRDQART 353

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ--SALHAMPDPLWI-SDDGYLSS 403
               A  +AP + +F LL ++ +    + + +  W +  + LH  PDP+W+ S  G  ++
Sbjct: 354 HLEKAWTLAPTQHVFRLLTELARHEDGDGEAMREWLERSAGLHPDPDPVWVCSACGTPAA 413

Query: 404 VWLPLSPISKTLCYFEWK 421
            W  + P  +     EW+
Sbjct: 414 GWSAVCPSCRGFDTMEWR 431


>gi|86136714|ref|ZP_01055292.1| HemY domain protein [Roseobacter sp. MED193]
 gi|85826038|gb|EAQ46235.1| HemY domain protein [Roseobacter sp. MED193]
          Length = 503

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 202/450 (44%), Gaps = 16/450 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +L+++ +  +++L+     I+      V IT     Y       +L++    L  WI   
Sbjct: 5   LLKILVFVALVALIAFGAGILMETAGGVQITVAGTEYTLGALQSVLALGVLVLSVWIFLK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       +     K    KGY+AL  G+M++A+    LA    S  ++ 
Sbjct: 65  LLTLLVATLKFLNGDETAMSRYFDKGRERKGYQALSDGMMALASGEGRLALTKASKAAR- 123

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               N  L  LL  Q A      + A E  + +L    TR   V  +  +    GD ++A
Sbjct: 124 -YLDNPQLTDLLTAQAAEMAGDTHKAAEAYKRLLSDQTTRFVGVRGIMKQKLSEGDKDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229
            + A KAL + P    V + ++Q    A++W+ A   L+ K K+       + R  A+L 
Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAQAEDWAGARKTLSAKLKSGSLPRDVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S E AD+   +     AIE+ +L  + + A+  AA++ + Q KKR A  +L+K W+ 
Sbjct: 243 LSASREVADEAASLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRNAIKVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+++  +  E T   ++KR  +L  +  +  E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHVFAEVEPEETAPQRVKRFDQLARLKPQDDETRLVMAELHIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
              ++ AP   +  L+A IE+    +      W   AL A   P W+  +  ++ + W P
Sbjct: 363 GDLVERAPDARVLTLMAAIEKGEGADNAVTQAWLARALTAPRGPQWLCTNCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINF 437
           +     +     W+ P ++PE  S+  ++ 
Sbjct: 423 VCEHCTSFDTLSWQRP-ETPEVASATGVHM 451


>gi|89067497|ref|ZP_01155010.1| HemY domain protein [Oceanicola granulosus HTCC2516]
 gi|89047066|gb|EAR53120.1| HemY domain protein [Oceanicola granulosus HTCC2516]
          Length = 495

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 193/409 (47%), Gaps = 33/409 (8%)

Query: 43  VILSILYFFLFAWILLFAVSRFF--LSCPAMLFHMLH-----------KRNYDKGYKALY 89
           V L+ L   +   +L+ A+  FF  L   + LFH L+           KR   +G++AL 
Sbjct: 41  VTLTTLQLAIAFVVLVLAIWLFFKLLGLLSALFHFLNGDETAVSRYFNKRTERRGFEALS 100

Query: 90  TGLMSIAAHNIPLA----RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
            G+M++AA +  LA     K   Y+ +        L  LL+ Q A       +A +  ++
Sbjct: 101 EGMMALAAGDGQLALVKAEKADRYLDRPE------LTNLLKAQAAERAGDRRVAEDTYKL 154

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           +LQ   TR   V  L  +    G+  +A + A +A  +SP    V+  +++     ++W+
Sbjct: 155 LLQDDRTRFVGVQGLMRQKLEAGETETAMQLAQRAFALSPKNDEVSNTLLRLQAEHEDWA 214

Query: 206 RAITFLNQKKKNA---KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            A   L  + K     ++ +R R A+L ++ + E   +G   A++ +AIE+ +L  + I 
Sbjct: 215 GARQTLGARLKTGAIPRDVHRRRDAVLALSEAREKLLEGKDAAAHEEAIEANRLSPDLIP 274

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEI 320
           A+I AA+  I QN  R A  +L+K W+  PHP++A  +  +   E    ++KR   L  +
Sbjct: 275 AAIMAARGYIDQNNGRSAARVLKKAWEAQPHPDLAAAFADIKPDEGPAERIKRFRDLTRV 334

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLA--MKIAPRKEIFLLLAQIEQANSHNTDKI 378
           + +  E+ +++++  L + + D   AK  L   ++  P   +  L+A IE+    +   +
Sbjct: 335 HPDHSETRMLLAE--LHVAAEDFPEAKRALGDLVETDPTARVLTLMAAIERGAGADDTVV 392

Query: 379 LYWTQSALHAMPDPLWISDDGY-LSSVWLPLSPISKTLCYFEWKIPTKS 426
             W   AL A     WI D+ + +++ W P+ P  K+     WK P +S
Sbjct: 393 RGWLTKALTAPRGDQWICDNCHNVAAHWAPVCPNCKSFDTLAWKRPPQS 441


>gi|126738548|ref|ZP_01754253.1| HemY domain protein [Roseobacter sp. SK209-2-6]
 gi|126720347|gb|EBA17053.1| HemY domain protein [Roseobacter sp. SK209-2-6]
          Length = 503

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 198/445 (44%), Gaps = 16/445 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +L+++ +F +I++     I++      V IT     Y  S    +L++    L  W+   
Sbjct: 5   LLKVLVFFAIIAVAAFGVIVLGETAGGVQITVAGTEYTLSALQSVLALGVLVLAVWVFFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       +     K    KGY+AL  GLM++A+    LA    S  ++ 
Sbjct: 65  VLALLVATLKFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLAMAKASRAARY 124

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A +  + +L    TR   V  +  +    GD ++A
Sbjct: 125 --LEKPELTDLLTAQAAEMAGDTGKAADAYKRLLSNQNTRFVGVRGIMKQKLSEGDSDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KAL + P    V + ++Q    A++W+ A   L+ K K        + R  A+L 
Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAKAEDWAGARKTLSTKLKTGTLPRDVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S E A     +     AIE+ +L  + + A+  AA++ + Q KKR A  IL+K W  
Sbjct: 243 LSASKEVAADTSSLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRAAIKILKKAWSA 302

Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +  +E+   ++KR  +L  +N ++ E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEVEPNESASERVKRFDQLARLNPQNDETRLVMAELLIVAEDFPEARRVL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
              ++ AP      L+A IE+        I  W   AL A   P W+ ++  ++ + W P
Sbjct: 363 GDLVERAPDARSLTLMAAIEKGEGAGDAVIQGWLARALSAPRGPQWLCENCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISS 432
           +     +     WK P ++PE  S+
Sbjct: 423 VCEHCTSFDTLSWKRP-ETPELNSA 446


>gi|323135815|ref|ZP_08070898.1| HemY domain protein [Methylocystis sp. ATCC 49242]
 gi|322398906|gb|EFY01425.1| HemY domain protein [Methylocystis sp. ATCC 49242]
          Length = 464

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 24/364 (6%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G   +  GL+++ A ++  AR   +    +     E L  +L  Q A     +  A +  
Sbjct: 84  GLDVISQGLVAVGAGDL--ARARKAAALAERLLPGEPLTQMLNAQAAQLSGDHQAAAKAF 141

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             M   P T+   +  L+ E+ R  D  +A  +A  A +I+P  PW   AV++ +    +
Sbjct: 142 HKMTLKPETKLLGLRGLHIEAKRRQDAEAAHHFAKAAHEIAP-LPWAGSAVLEHHAAGGD 200

Query: 204 WSRAITF----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI----ESLKL 255
           W +A       L  K  +A      RA++  A ++E   +       HDA+    ++LK 
Sbjct: 201 WEKARAAVEANLAAKAIDAATAQNLRAVIETAMAMEKERE-----HPHDALRLARQALKR 255

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRA 314
                 A+  AA+ LI    +++A  ++E +W   PHP++A +Y   L  E+   ++ R 
Sbjct: 256 RPGFPPAAATAARVLIHHGDRKQALKLIETVWATKPHPDLAEVYFEALPDESNSQRVARI 315

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQA 370
            +L  +  ++ ES  I+++ AL   + D   A+  LA  +A    P     LL+A+IE A
Sbjct: 316 EKLARLAPDAPESRHILAQAALS--ARDFTKAREALAPLVAAGQHPTAHTCLLMAEIEDA 373

Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYI 430
            +  +  +  W      A  DP WI+D G +S  WLP+SP+S  L  FEWKIP  S +++
Sbjct: 374 QNGPSGPVREWLARGSRAPRDPAWIAD-GVVSKHWLPISPVSGKLDAFEWKIPPHSAQHL 432

Query: 431 SSEN 434
           + E 
Sbjct: 433 TEEG 436


>gi|254476677|ref|ZP_05090063.1| HemY domain protein [Ruegeria sp. R11]
 gi|214030920|gb|EEB71755.1| HemY domain protein [Ruegeria sp. R11]
          Length = 496

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 189/436 (43%), Gaps = 15/436 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-WI--- 56
           +L+++ +  +++++     +++     V IT     Y  S    +  L   +FA W+   
Sbjct: 5   LLKILVFVAIVAVLAFGASLLTETAGGVQITVAGTEYTLSALQSVIALAVLVFAVWLGFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  RF       L     K    KGY+AL  G+M++A+    LA  M      +
Sbjct: 65  VLSLLIATLRFLNGDETALSRYWDKGRERKGYQALSDGMMALASGEGRLA--MAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +N  L  LL  Q A        A E  + ++   +TR   V  +  +    GD  +A
Sbjct: 123 KYLNNPELTDLLTAQAAEMAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAILL 229
           ++ A KAL + P    V + ++     A++W+ A   L  K K        + R  A+L 
Sbjct: 183 RQLAEKALALRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S    + G  +     AIE+ +L  + + A+  AA++ +S+ KKR A  +L+K W+ 
Sbjct: 243 LSASKAIVEDGATVEQQEQAIEANRLSPDLVPAAAMAARTYLSRGKKRNAIRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +   E+   ++KR ++L  +  +  E+ +I++++ +      +A    
Sbjct: 303 QPHPDLAQAFAEVEPGESAQERVKRFVQLSRLAPQHDETRLIMAELNIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
              ++ AP      L+A IE+        I  W   AL A   P W+ D   ++ + W P
Sbjct: 363 GDLVERAPDARALTLMAAIEKGEGAPDAVIQGWLTRALSAPRGPQWVCDKCNHIHADWAP 422

Query: 408 LSPISKTLCYFEWKIP 423
           +     +     W  P
Sbjct: 423 VCENCASFDTLSWTRP 438


>gi|218507798|ref|ZP_03505676.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
          Length = 240

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 4/224 (1%)

Query: 17  SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76
            F   +  P D+S+ W  ++Y+T   V +S +   + A ++++   R   + P  +    
Sbjct: 17  GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTRYF 76

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R  D+GY+AL TGL++  A N  LARKM +          E L+ LLE Q AL E ++
Sbjct: 77  RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 136

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A  K E M   P TRE  +  LY E+ R+G   +A++YA KA D +P  PW  +A ++
Sbjct: 137 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 196

Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
               A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 197 YRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 240


>gi|163745151|ref|ZP_02152511.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45]
 gi|161381969|gb|EDQ06378.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45]
          Length = 501

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 193/440 (43%), Gaps = 26/440 (5%)

Query: 4   LIRYFFVISLVIC-----SFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWIL 57
           LI+    + LV        F++ S     + +T     Y   P   ++++L      W+L
Sbjct: 5   LIKIVLFVVLVAALAWGAGFLLESQG--GIQLTVAGTEYTLGPLQSVIAVLLLMFAVWVL 62

Query: 58  LFAVSRF-----FLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNIPLARKMHSYVS 111
           L  V+       FL+           RN + KGY+AL  GLM++A+    +A  M     
Sbjct: 63  LKIVALLSATWHFLNGDETALSRYFDRNRERKGYEALSDGLMALASGEGQVA--MAKAAK 120

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                    L  LL  Q A        A      +++   TR   V  +  +    GD  
Sbjct: 121 ADRYLKRPALTNLLTAQAAELAGDRRKAERTYRKLVEDEKTRFVGVRGIMKQKLADGDTE 180

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AI 227
           +A + A KA  + P      + +++      +W+ A   L  K KN    ++ ++ R A+
Sbjct: 181 TALKLAEKAFALKPKHEETGDTLLKLQADKHDWTGARQTLQAKYKNGHLPRDVHKRRDAV 240

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L ++ + E   +G+ I +   AIE+ +L  + + A++ AA+S I+Q+K R A  +L+K W
Sbjct: 241 LALSEAREVIAEGNSIEAREAAIEANRLSPDLVPAAVMAARSYIAQDKPRYASKVLQKAW 300

Query: 288 KVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            V+PHP++A  +  +  + T   ++KR   L +   +  E+ +++++  L + + D   A
Sbjct: 301 SVHPHPDLAAAFAEVQPDETPQQRIKRFRALTKSQPDHPETKMLLAE--LHIANEDFPEA 358

Query: 347 KAMLA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSS 403
           +  L   ++  P      L+A IE+    +   +  W   AL+    P WI ++  ++ +
Sbjct: 359 RRALGNLVETDPSARSVTLMAAIERGEGASDTVVKGWLTRALNVSRGPQWICENCHHIHA 418

Query: 404 VWLPLSPISKTLCYFEWKIP 423
            W P+    K+    EWK P
Sbjct: 419 EWKPICENCKSFDTLEWKTP 438


>gi|77462046|ref|YP_351550.1| hypothetical protein RSP_1508 [Rhodobacter sphaeroides 2.4.1]
 gi|77386464|gb|ABA77649.1| Uncharacterized HemY-like membrane protein [Rhodobacter sphaeroides
           2.4.1]
          Length = 482

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 199/469 (42%), Gaps = 34/469 (7%)

Query: 4   LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           LI+    ++LV+      S   E    + +  G+      P   +++ L   L  W+ L 
Sbjct: 5   LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109
                FAV RF       +     +    KG +AL  G+M++AA      +  A K   Y
Sbjct: 65  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 124

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           + Q        +  LL  Q A        A E  +++L+   TR   V  L  +    GD
Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 178

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225
            ++A   A KA +I+P      + +++      +WS A + L+ K K+       + R  
Sbjct: 179 TDTALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 238

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+L +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K
Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298

Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            W+  PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L   + D  
Sbjct: 299 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 356

Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401
            A+  L   +A  P +    ++A +E+    +   +  W   AL A   P W  D+   +
Sbjct: 357 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 416

Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446
            + W P+           W+ PT+  +P    +E +        A PAD
Sbjct: 417 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 465


>gi|149912845|ref|ZP_01901379.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b]
 gi|149813251|gb|EDM73077.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b]
          Length = 496

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 198/456 (43%), Gaps = 27/456 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPE---DVSITWGNRLYRTSPFVILSILYFFLFAWILL-- 58
           +++    I+LV  + +  +H  E    V I +G + +  +P   +  L   + A  LL  
Sbjct: 5   ILKIVGFIALVSAATLGAAHLIEMEGGVRIVFGGQEFNLTPIKAVIALIVLVIALWLLLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  +F       +     K   +KG++AL  G+M++A+    LA  M      +
Sbjct: 65  LVSLLVATLKFINGDETAISRYFDKNRQEKGFRALSEGMMALASGEGDLA--MSKASKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A    + +L+   TR   V  L  +    GD  +A
Sbjct: 123 KYLRKPDLTNLLTAQAAELSGDTRKAELVYKKLLKDDRTRFVGVRGLMRQKLAAGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229
            + A  A  + P    V +A+++      +W  A   LN K K     ++ ++ R A+L 
Sbjct: 183 LKLAKTAFALKPRHGEVQDALLRLQAQTADWKGARETLNAKLKYGSLPRDLHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +  D+G  I +   AIE+ +L  + + A++ AA+S ISQ  KR A  + +K W V
Sbjct: 243 LSEAKDVLDEGKDIEAREAAIEANRLSPDLVPAAVLAARSYISQGSKRYATRVTKKAWGV 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           +PHP++A  +  +  + T   +LKR  +L  ++ ++ E+ ++  K  L + + D   A+ 
Sbjct: 303 HPHPDLAAAFAEIEPDETPAQRLKRFSKLIAMHPDNRETKLL--KAELHLAAEDFPAARR 360

Query: 349 MLA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405
            L   ++  P   +  ++A IE+    +   +  W   AL A   P W+ D+  ++ + W
Sbjct: 361 ALGDLVETDPDARVLTIMAAIERGEGSSDAVVKGWLARALSAPRGPQWVCDNCQHIHAEW 420

Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEM 441
            P            WK P      +S+   +  +EM
Sbjct: 421 APACDHCNAFDTLTWKTPP-----VSTMTTSTGIEM 451


>gi|298292771|ref|YP_003694710.1| HemY domain protein [Starkeya novella DSM 506]
 gi|296929282|gb|ADH90091.1| HemY domain protein [Starkeya novella DSM 506]
          Length = 526

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 202/431 (46%), Gaps = 16/431 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS----PFVILSILYFFLFAWI 56
           M+RL+ Y  V++L+      ++  P  ++I W      TS       +L++L   +  W 
Sbjct: 1   MIRLVVYLLVLALIAFGVAWLADRPGSIAIDWQGWQIETSILVAASALLALLAATILLWT 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           LL    R     P ++      R  ++G+ A+  GL+++ + +   AR+  +    +   
Sbjct: 61  LL----RLIFRSPELIAFSWRSRRRNRGWAAVTRGLVAVGSGDALGARRAAN--DAERLL 114

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            +E L  LL  Q A      + A      M + P+TR   +  L+ E+ R GD  +A   
Sbjct: 115 GHEPLTRLLAAQAAQLAGDRDGAEAAFRAMSETPSTRLLGLRGLHVEARRRGDAAAALLS 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARS 233
           A +A  + P   W  +AV++   L  +++ A+  L ++  +       +R R  +L+A  
Sbjct: 175 AEEAARVEPGLAWAADAVIEARCLNGDFAGALATLEREAAHGGLERAAHRRRRAVLLAAQ 234

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            +  +  D   +   A+E+ +L    + A+  A + L +    RKA  I+E  +   PHP
Sbjct: 235 AQALELSDPSTAREKAVEATRLAPTLVPAAEVAGRLLGASGDTRKAAKIIEAAYAATPHP 294

Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           ++A+ + HL   +++  +LKR   L        ES +++++ A++    D A   A+  +
Sbjct: 295 DLADAFLHLRPGDSSQERLKRIRTLTARMPSHPESAMVLARAAIDAQEFDVAR-TALGPL 353

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
              P +   LL+A++E A   +  K   WT  A+ A  DP W++ DG ++  W P+SP++
Sbjct: 354 LGEPTQRACLLMAELEAAEHGDVGKAREWTARAVRAARDPAWVA-DGVVAERWAPVSPVT 412

Query: 413 KTLCYFEWKIP 423
             L  FEWK+P
Sbjct: 413 GKLDAFEWKLP 423


>gi|126460935|ref|YP_001042049.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126102599|gb|ABN75277.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 482

 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 198/469 (42%), Gaps = 34/469 (7%)

Query: 4   LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           LI+    ++LV+      S   E    + +  G+      P   +++ L   L  W+ L 
Sbjct: 5   LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109
                FAV RF       +     +    KG +AL  G+M++AA      +  A K   Y
Sbjct: 65  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 124

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           + Q        +  LL  Q A        A E  +++L+   TR   V  L  +    GD
Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 178

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225
             +A   A KA +I+P      + +++      +WS A + L+ K K+       + R  
Sbjct: 179 TETALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 238

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+L +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K
Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298

Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            W+  PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L   + D  
Sbjct: 299 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 356

Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401
            A+  L   +A  P +    ++A +E+    +   +  W   AL A   P W  D+   +
Sbjct: 357 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 416

Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446
            + W P+           W+ PT+  +P    +E +        A PAD
Sbjct: 417 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 465


>gi|332559973|ref|ZP_08414295.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|332277685|gb|EGJ23000.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 482

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 198/469 (42%), Gaps = 34/469 (7%)

Query: 4   LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           LI+    ++LV+      S   E    + +  G+      P   +++ L   L  W+ L 
Sbjct: 5   LIKILIFVALVVALTFGASELMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109
                FAV RF       +     +    KG +AL  G+M++AA      +  A K   Y
Sbjct: 65  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 124

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           + Q        +  LL  Q A        A E  +++L+   TR   V  L  +    GD
Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 178

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225
             +A   A KA +I+P      + +++      +WS A + L+ K K+       + R  
Sbjct: 179 TETALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 238

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+L +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K
Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298

Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            W+  PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L   + D  
Sbjct: 299 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 356

Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401
            A+  L   +A  P +    ++A +E+    +   +  W   AL A   P W  D+   +
Sbjct: 357 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 416

Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446
            + W P+           W+ PT+  +P    +E +        A PAD
Sbjct: 417 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 465


>gi|146278943|ref|YP_001169102.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145557184|gb|ABP71797.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 482

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 190/452 (42%), Gaps = 28/452 (6%)

Query: 4   LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF--VILSILYFF---LFAW 55
           LI+    ++LV+      S   E    + +  GN      P   VI ++L  F   LF  
Sbjct: 5   LIKILIFVALVVGLTFGASMLMESGGALRLAVGNLELNLGPLQAVIAALLLIFTVWLFLK 64

Query: 56  IL--LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109
           I+  LFAV RF       +     +    KG +AL  G+M++AA      +  A K   Y
Sbjct: 65  IMGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRMAMSRASKARKY 124

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           + Q        +  LL  Q A        A E  +++LQ   T+   +  L  +    GD
Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLQDERTKFVGIRGLLKQKLDEGD 178

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNR 225
             +A   A KA +I+P      + +++      +WS A + L  K K+       + R  
Sbjct: 179 TETALALAQKAFEINPKHSETQDILLKLQADRHDWSGARSTLTAKMKSGALPKAVYKRRD 238

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+L +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K
Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298

Query: 286 IWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            W+  PHP++A  +  +  +E  V +LKR   L  IN +  ES ++ ++++L       A
Sbjct: 299 AWEAEPHPDLAAAFAEIEPNETPVERLKRFRTLTSINPDHEESRLLTAELSLAAEDFPAA 358

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSS 403
                  +   P +    ++A +E+    +   +  W   AL A   P W  D+   + +
Sbjct: 359 RRALGDIVSRHPTQRSLTIMAAVERGEGGDEAVVRGWLARALSAPRGPQWCCDNCQTVHA 418

Query: 404 VWLPLSPISKTLCYFEWKIPTK--SPEYISSE 433
            W P+           W+ PT+  +P    +E
Sbjct: 419 NWAPICDNCGGFDTLSWREPTRKSTPSATGTE 450


>gi|149204332|ref|ZP_01881299.1| HemY domain protein [Roseovarius sp. TM1035]
 gi|149142217|gb|EDM30264.1| HemY domain protein [Roseovarius sp. TM1035]
          Length = 490

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 168/391 (42%), Gaps = 8/391 (2%)

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102
           V++ I++  +    LL A  +F       L     +   DKGY+AL  G++++A+    +
Sbjct: 54  VLVFIIWLLMKLTGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALASGEGEV 113

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  M      +       L  L+  Q A        A E  + +L    TR   V  +  
Sbjct: 114 A--MAQVAKAEKYLRKPALTNLITAQAAEMAGNRRKAEEVYKQLLTNEKTRFVGVRGILR 171

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---K 219
           +    GD  +A + A  A  + P    V + ++       +W  A   LN K K     +
Sbjct: 172 QKLAEGDTETALKLAKTAFALKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKYGSLPR 231

Query: 220 EWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           + ++ R A+L ++ + +  D+G  I +   AIE+ +L  + I A++ AA+  I Q   R 
Sbjct: 232 DVHKRRDAVLALSEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQGNTRN 291

Query: 279 AEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           A  ++ K W V PHP++A  +  +  +E+   +LKR  +L +++ E+ E+ ++ +++ L 
Sbjct: 292 ALRVINKAWLVRPHPDLAAAFAAIEPNESPRQRLKRFAKLLKVHPENRETRLLEAELNLA 351

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
                 A        ++ P      ++A IE+    +   +  W   AL A   P W+ D
Sbjct: 352 AEDFPAARRALGTLAEVEPDARALTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCD 411

Query: 398 D-GYLSSVWLPLSPISKTLCYFEWKIPTKSP 427
              ++ + W P      +     W+ P  SP
Sbjct: 412 KCQHIHAEWAPACENCNSFDTLSWRAPPNSP 442


>gi|221640998|ref|YP_002527260.1| HemY domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221161779|gb|ACM02759.1| HemY domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 478

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 198/469 (42%), Gaps = 34/469 (7%)

Query: 4   LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           +I+    ++LV+      S   E    + +  G+      P   +++ L   L  W+ L 
Sbjct: 1   MIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 60

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109
                FAV RF       +     +    KG +AL  G+M++AA      +  A K   Y
Sbjct: 61  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 120

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           + Q        +  LL  Q A        A E  +++L+   TR   V  L  +    GD
Sbjct: 121 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 174

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225
             +A   A KA +I+P      + +++      +WS A + L+ K K+       + R  
Sbjct: 175 TETALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 234

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+L +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K
Sbjct: 235 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 294

Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            W+  PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L   + D  
Sbjct: 295 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 352

Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401
            A+  L   +A  P +    ++A +E+    +   +  W   AL A   P W  D+   +
Sbjct: 353 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 412

Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446
            + W P+           W+ PT+  +P    +E +        A PAD
Sbjct: 413 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 461


>gi|254510666|ref|ZP_05122733.1| HemY domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221534377|gb|EEE37365.1| HemY domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 498

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/450 (22%), Positives = 195/450 (43%), Gaps = 16/450 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF---VILSILYF----FLF 53
           +L+++ +  +I L+      +      V IT     Y   P    + L +L F    F  
Sbjct: 5   LLKILVFVAIIGLLAMGAGFLMESSGGVQITVAGTEYTLGPLQSAIALGVLVFAVWLFFK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       L     +    +GY+AL  GLM++A+    +A  M      +
Sbjct: 65  LLTLLVATLKFLNGDETALSRYFDRSREKRGYQALADGLMALASGEGRVA--MTKANKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  LL  Q A        A E  + ++   +TR   V  +  +    GD  +A
Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKASETYKKLVANNSTRFVGVRGIMKQKLSEGDDETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KAL I P      + ++     A++W+ A + LN K K        + R  A+L 
Sbjct: 183 LKLAEKALAIKPRHEETQDVLLNLQTRAQDWAGARSTLNSKLKAGYLPRDVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +  D+   +     AIE+ +L  + + A+  AA++ I + K R A  IL+K W+ 
Sbjct: 243 LSEAKDILDETASVEQQEHAIEANRLSPDLVPAAAMAARAYIEKGKPRAAAKILKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +   + + T   ++KR   L  I+ +++E+ +I++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEAVPDETPEQRIKRFTALTRIHPDNMETRLILAELNIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
              ++       + L+A IE+    +   +  W   AL+A   P W+ D+ + + + W P
Sbjct: 363 GDVVEKQGDARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCDNCHDIQAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINF 437
           +     +     W+ P ++PE  S   ++ 
Sbjct: 423 ICQNCGSFDTLSWQTP-QTPEIASVTGVHM 451


>gi|182678175|ref|YP_001832321.1| HemY domain-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634058|gb|ACB94832.1| HemY domain protein [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 493

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 218/482 (45%), Gaps = 30/482 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +I+ +      +   P    +TW      TS  V +++L        L   
Sbjct: 1   MLRVLLFLCLIAALALGAAWIGEQPGHFLMTWQGYQVETSAPVAITLLGVSAAILALALW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L+ P         R  +KGY AL  G+++  A +  +A K  + +  Q     + 
Sbjct: 61  LLVTILNLPKTFARWRETRLKNKGYAALSRGIVAAGAGDTHVANK--AALDAQKYLPKDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV +LE Q A      + A +   +M + P  R   +  LY E+ R  D  +A  +A +A
Sbjct: 119 LVLVLEAQAAQLAGDRSRAQDAFRLMGERPEMRLLGLRGLYAEALRNDDSEAAYHFAHEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----EWNRNRAILLIARSLE 235
             + P  PW  +AV+ +++ A++W  A   L  K+ NA+        R  AIL  A + E
Sbjct: 179 HKVHP-LPWSAKAVLDEHIRAQDWEGAFGILG-KQINAQLVDKATGERQCAILETAMAQE 236

Query: 236 NADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                  +++  +A+    ++LK   + + A +  A     +N  R+A  ++E+ W    
Sbjct: 237 KE-----LSAPDEALRLGRQALKHAPDLVPAIVLVAHLWGRKNDVRRAAKLIEREWPNIQ 291

Query: 292 HPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSK--IALEMGSIDQAHAKA 348
           HP+IA  Y  L   ++ + +L+RA RL  +   S ES + V+   IA    ++ +   + 
Sbjct: 292 HPDIALAYLDLRPGDSNMDRLRRAQRLARLAPGSAESRLSVAGAAIAARQFALARETMRE 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408
           +LA +  P   +  L+A++E+  S  +  +  W   A  A  D  W++D G++S  WLP 
Sbjct: 352 LLAKEKTPTVRMCQLMAELEETESGFSGSVREWLAKASRAPRDETWVAD-GFVSPKWLPA 410

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
           SP++  L  F W+ P         E +  +L+ A   ++   +L+  +K+   + KK + 
Sbjct: 411 SPVTGQLDAFRWQRPV--------ERLVVTLDNAEAVEETALLLSEEEKHGADTSKKAAV 462

Query: 469 FE 470
            E
Sbjct: 463 QE 464


>gi|83950381|ref|ZP_00959114.1| HemY domain protein [Roseovarius nubinhibens ISM]
 gi|83838280|gb|EAP77576.1| HemY domain protein [Roseovarius nubinhibens ISM]
          Length = 525

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 13/374 (3%)

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
           RF       +     +   +KGY+AL  G+M++A+    LA  M      +   H   L 
Sbjct: 74  RFINGDETAMSRYFDRNRQEKGYRALTEGMMALASGEGKLA--MSRAARAEKYLHKPELT 131

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL  Q A        A E  + +L+   TR   V  L  +    GD ++A + A  A  
Sbjct: 132 NLLTAQAAELTGDRRTAEEVYKRLLKDDKTRFVGVRGLLKQKIEEGDTDTALKLAETAFG 191

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSLENAD 238
           + P    V + ++Q      +W  A   LN K K+    ++ +R R AIL +A + + A 
Sbjct: 192 LKPTHEEVQDTLLQLQAGQADWKGARATLNAKLKHGSLPRDLHRRRDAILALAEARDIAA 251

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +   I +   AIE+ +L  + + A++ AA++ I    KR A  ++ K W+  PHP++A  
Sbjct: 252 ENSTIEAKETAIEANRLSPHLVPAAVMAAQAYIEDGSKRYATRVIRKAWESQPHPDLAAA 311

Query: 299 YTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--KIA 355
           Y  +  + T   +LKR  +L +++ +  E+ ++ ++  L++ + D   A+  L    + A
Sbjct: 312 YAAIEPDETPDQRLKRFAKLFKLSPDHPEAKLVEAE--LQIAAEDFPAARRALGTLAETA 369

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKT 414
           P      ++A IE+    N   +  W   A+ A   P WI ++  ++   W P       
Sbjct: 370 PDARSLTIMAAIERGAGANDTVVKGWLARAVAAARGPQWICENCQHIHHEWAPTCAHCHA 429

Query: 415 LCYFEWK-IPTKSP 427
           +   EW+  P  +P
Sbjct: 430 VDTLEWRNAPGAAP 443


>gi|83941980|ref|ZP_00954442.1| HemY domain protein [Sulfitobacter sp. EE-36]
 gi|83847800|gb|EAP85675.1| HemY domain protein [Sulfitobacter sp. EE-36]
          Length = 503

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 185/441 (41%), Gaps = 19/441 (4%)

Query: 1   MLRLIRYFFVISLVI--CSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI- 56
           +++++ +  VI+ +    SF++ S     V++      Y   P   +++++   +  WI 
Sbjct: 5   LIKIVVFVAVIAAITWGASFLLESSGGLQVTVM--GTEYSFGPLQSVIAVVLLIVAVWIM 62

Query: 57  -----LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111
                LL AV  F       L     +    KGY+AL  GLM++A+    LA  M     
Sbjct: 63  LKIFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRLA--MAKAAK 120

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                    L  LL  Q A        A E    ++    TR   V  +  +    GD  
Sbjct: 121 ADKYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEGDTE 180

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAI 227
           +A + A KA  I P      + +++     ++W+ A   LN K KN +       R  A+
Sbjct: 181 TALKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRRDAV 240

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L ++ + +   +G+ I +   AIE+ +L  + I A++ AA   I Q K + A  +L+K W
Sbjct: 241 LALSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLKKAW 300

Query: 288 KVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            V PHP++A  +  +  + T   +LKR   L  +  +  E+ ++++++ +      QA  
Sbjct: 301 DVQPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQARR 360

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405
                ++  P      L+A IE+    +   +  W   AL     P WI D+  ++ + W
Sbjct: 361 SLGDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIHASW 420

Query: 406 LPLSPISKTLCYFEWKIPTKS 426
            P+     +     WK P  S
Sbjct: 421 KPICENCHSFDTLAWKTPPMS 441


>gi|84684559|ref|ZP_01012460.1| Uncharacterized HemY-like membrane protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667538|gb|EAQ14007.1| Uncharacterized HemY-like membrane protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 504

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 179/439 (40%), Gaps = 15/439 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           + ++I +  +I         +      + +  G + Y       +++++   +  WILL 
Sbjct: 5   LFKIILFVVLIGAATVGATYLLETDGGIRVDIGAQEYNLGALQAVIALIVLVVTLWILLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  RF       +     +    KGY+AL  G+M++A+     A  +      +
Sbjct: 65  LAGLIVATIRFLNGDETAISRHFDRNRERKGYEALADGMMALASGEERTA--ITKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  L+  Q A        A E  + +L    TR   V  L  +    GD ++A
Sbjct: 123 RYLRRPELTNLITAQAAEMAGDRKKATEVYKRLLADERTRFVGVRGLMKQKLEEGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229
            + A KA  + P      + ++       +W  A   L +K K+    K+  + R A+L 
Sbjct: 183 MKLAEKAFALKPQHAETGDVLLALQATQNDWHGARETLGKKVKHGALPKDVGKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  +      G+ I +   AIE+ KL  + I  S+ AA+S + Q+ KR A  +L K WKV
Sbjct: 243 LQEAKGIFQDGNSIRAREAAIEANKLSPDLIPGSVLAARSYLEQDNKRYAARVLTKTWKV 302

Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP+IA  +  +  +E    +LKR   L + + +  E+ ++++++ +     D+A    
Sbjct: 303 QPHPDIAEAFAEIEPNETPEQRLKRFKALTKEHPDHPENKMLLAELHIAAEQFDKAREAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
                  P + +  L+A IE+       +I  W   A+ A   P W+ D  + + + W P
Sbjct: 363 GDLPTTKPTQRVLTLMAAIERGLEAPDSEIRAWLAKAVVAPRGPQWVCDKCHTVHADWGP 422

Query: 408 LSPISKTLCYFEWKIPTKS 426
           +           W  P ++
Sbjct: 423 VCENCGAFDTLSWSEPRET 441


>gi|83953029|ref|ZP_00961751.1| HemY domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83841997|gb|EAP81165.1| HemY domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 503

 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 160/384 (41%), Gaps = 8/384 (2%)

Query: 49  YFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHS 108
           +  L  + LL AV  F       L     +    KGY+AL  GLM++A+    LA  M  
Sbjct: 60  WIMLKIFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRLA--MAK 117

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
                       L  LL  Q A        A E    ++    TR   V  +  +    G
Sbjct: 118 AAKADKYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEG 177

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRN 224
           D  +A + A KA  I P      + +++     ++W+ A   LN K KN +       R 
Sbjct: 178 DTETALKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRR 237

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+L ++ + +   +G+ I +   AIE+ +L  + I A++ AA   I Q K + A  +L+
Sbjct: 238 DAVLALSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLK 297

Query: 285 KIWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           K W V PHP++A  +  +  + T   +LKR   L  +  +  E+ ++++++ +      Q
Sbjct: 298 KAWDVQPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQ 357

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLS 402
           A       ++  P      L+A IE+    +   +  W   AL     P WI D+  ++ 
Sbjct: 358 ARRSLGDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIH 417

Query: 403 SVWLPLSPISKTLCYFEWKIPTKS 426
           + W P+     +     WK P  S
Sbjct: 418 ASWKPICENCHSFDTLAWKTPPMS 441


>gi|261884328|ref|ZP_06008367.1| hypothetical protein CfetvA_03481 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 266

 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 13/208 (6%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKK 276
            + RA LL A+++   D      ++H      A+E+ KL  + + A++ AA++L +  + 
Sbjct: 13  KKERAALLTAKAMATLD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEI 66

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIA 335
           RK   ILE  WK  PHP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A
Sbjct: 67  RKGSKILEAAWKRFPHPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAA 126

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395
            E G    A   A   ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W 
Sbjct: 127 YEAGEYSVARDNAEQVLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWT 186

Query: 396 SDDGYLSSVWLPLSPISKTLCYFEWKIP 423
           + D Y+   W P+SP++  L  FEWK+P
Sbjct: 187 A-DCYVCEQWSPVSPVTGRLNSFEWKVP 213


>gi|84501232|ref|ZP_00999437.1| HemY domain protein [Oceanicola batsensis HTCC2597]
 gi|84390523|gb|EAQ03011.1| HemY domain protein [Oceanicola batsensis HTCC2597]
          Length = 502

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 207/504 (41%), Gaps = 28/504 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPE---DVSITWGNRLYRTSPF--VILSIL-----YFFLF 53
           L++    ++LV  + +  S+  +    V I  G      +P   VI ++L     + FL 
Sbjct: 5   LVKIIVFVALVAAATLGASYLLDMQGGVLIAMGGIEINLTPIKAVIAAVLLVLAVWLFLK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
            + LL A+ RF       L     +    KGY+AL  GLM++A+      R+  S  S+ 
Sbjct: 65  LFGLLIALLRFINGDETALSRYFDRNRERKGYEALSDGLMALASGE---GRRAMSKASRA 121

Query: 114 HTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
             F +   L  LL  Q A      + A    + +L    TR   V  +  +    GD ++
Sbjct: 122 ERFLDRPDLTTLLTAQAAEMVGDKDKAEAAYKKLLSDDRTRFVGVRGIMKQKLAAGDTDT 181

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AIL 228
           A   A KA  I P    V + +++      +W  A   L  K ++    ++ +R R A+L
Sbjct: 182 ALALAEKAFAIKPGHEEVQDTLLRLQAQRSDWKGARATLKAKLRHGNLPRDVHRRRDAVL 241

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            ++ +     +   I S   AIE+ KL  + I A++ AA+S I Q +KR A  +L+K W+
Sbjct: 242 ALSEAKGVFSEDGTIESREAAIEANKLSPDLIPAAVMAARSYIDQGQKRYAARVLKKAWE 301

Query: 289 VNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
             PHP++A  +  +  + T   +LKR  +L +      ES ++++++ +      +A   
Sbjct: 302 AAPHPDLAAAFAEIEPDETPQERLKRFQQLVKSAPNHRESRLLMAELNIAAEDFPEARRA 361

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWL 406
                   P      ++A IE+        +  W   A+ A   P W  ++  ++ + W 
Sbjct: 362 LGDLASENPDARTLTIMAAIERGEGAPDAIVKGWLARAVSAPRGPQWTCENCHHIHAHWQ 421

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPAD---DLQSMLNNGKKNHLPSI 463
           P+           WK P               L +    D   D     +  +   +PS 
Sbjct: 422 PICDNCGAFDTLAWKTPPMGEAQAPVGTAMLPLIVGQIEDWGADAPDRPDR-EDEDMPS- 479

Query: 464 KKVSSFEDSTIHPLDPHIRQPDDP 487
              S  ED+ I P DP  ++P+ P
Sbjct: 480 ---SEPEDAEILPSDPPSQEPEKP 500


>gi|254486881|ref|ZP_05100086.1| HemY domain protein [Roseobacter sp. GAI101]
 gi|214043750|gb|EEB84388.1| HemY domain protein [Roseobacter sp. GAI101]
          Length = 502

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 168/395 (42%), Gaps = 14/395 (3%)

Query: 44  ILSILYFFLFAWI------LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97
           +++I+   +  W+      LL AV  F       L     +    KGY+AL  GLM++A+
Sbjct: 49  VIAIIVLVIAVWLVLKIISLLIAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALAS 108

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
               LA  +              L  LL  Q A        A E  + ++   +TR   V
Sbjct: 109 GEGRLA--LSKAAKADKYLERPELTNLLIAQAAEMAGDKRKAEETYKKLVANESTRFVGV 166

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  +    GD ++A + A KA  + P      + +++     ++WS A   LN K KN
Sbjct: 167 RGILKQKLAEGDTDTALKLAEKAFALKPKHADTGDILLKLQAEKEDWSGARETLNTKLKN 226

Query: 218 AK----EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +       R  A+L ++ + +   +G  I +   AIE+ +L  + I A++ AA S I Q
Sbjct: 227 GQLPRDVHKRRDAVLALSEAKDVFTEGHSIEAREAAIEANRLSPDLIPAAVMAAHSYIDQ 286

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVS 332
            K + A  +L+K W V+ HP++A+ +  +  + T   +LKR   L     +  E+ ++++
Sbjct: 287 GKPKYAARLLKKAWSVHAHPDLASAFAAIAPDETPKERLKRFTALTRTQPDDPETKMLLA 346

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           ++ +      +A       ++  P      L+A IE+    +   +  W   AL     P
Sbjct: 347 ELNIANEDFPEARRSLGNLVETDPTARSVTLMAAIERGEGASDTVVKGWLARALTVSRGP 406

Query: 393 LWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426
            WI D+  ++ + W P+     +     WK P  S
Sbjct: 407 QWICDNCQHIHTNWKPICDNCHSFDTLAWKTPPMS 441


>gi|254459948|ref|ZP_05073364.1| HemY domain protein [Rhodobacterales bacterium HTCC2083]
 gi|206676537|gb|EDZ41024.1| HemY domain protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 494

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 8/373 (2%)

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           LL AV  F       L     K    KGY+AL  G+M++A+ +   +  M      +   
Sbjct: 68  LLVAVLNFINGDETALSRYFSKNRERKGYQALSEGMMALASGDG--SAAMSKAAKAEKYL 125

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L  LL  Q A        A E  + +++  ATR   V  +  +    GD ++A   
Sbjct: 126 AKPELTNLLTAQAAEMAGDRRKAEETYKKLVKDEATRFVGVRGIMKQKLAEGDTDTALEL 185

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIAR 232
           A  A  + P      + +++     ++W+ A   L  K K+         R  A+L +++
Sbjct: 186 AEHAFALKPKHEETQDILLKLQAQGQDWAGARKTLAAKLKSGSLPRDVHKRREAVLALSQ 245

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           S    D+G    +   A E+ +L  + I A++ AA+S I Q+KKR A  +L+K W V PH
Sbjct: 246 SKGVFDEGKDTEAREAATEANRLAPDLIPAAVMAARSYIEQDKKRYAVRVLKKAWDVQPH 305

Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           PE+A  Y  +  E T V ++KR   L + + +  E+ ++ +++ +       A       
Sbjct: 306 PELAAAYAAIEPEETPVERIKRFANLTKSHADHAETKMLNAELNIAAEDFPAARRAMGDL 365

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSP 410
           +  AP      ++A IE+    +   +  W   AL A   P W+ D   ++ + W P+  
Sbjct: 366 VDTAPDARSLTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCDACNHIHAEWEPVCG 425

Query: 411 ISKTLCYFEWKIP 423
              +     WK P
Sbjct: 426 NCASFDTLSWKSP 438


>gi|56698662|ref|YP_169039.1| HemY domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56680399|gb|AAV97065.1| HemY domain protein [Ruegeria pomeroyi DSS-3]
          Length = 493

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 185/436 (42%), Gaps = 15/436 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSP------FVILSILYFFLFA 54
           ML+++ +  +I+L+      +      V IT     Y   P      F +L +  +  F 
Sbjct: 1   MLKILVFVAIIALLALGAGFLMEASGGVQITVAGTEYTLGPLQSVIGFGLLVVAVWLFFK 60

Query: 55  WI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
            + LL A  +F       L     +    +GY+AL  GLM++A+    LA  M      +
Sbjct: 61  LLTLLIATLKFLNGDETALSRYFDRGRERRGYQALTEGLMALASGEGRLA--MAKAARAE 118

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E    ++   +TR   V  +  +    GD  +A
Sbjct: 119 KLLQKPELTNLLVAQAAEMTGDTKKAAETYRKLVTDQSTRFVGVRGIMKQKLAEGDDETA 178

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P      + ++     A++W+ A   L  K K        + R  A+L 
Sbjct: 179 RKLAEKALALKPRHEETQDVLLTLQTRAQDWAGARATLTSKLKTGTLPRDVYKRRDAVLA 238

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +   +     AIE+ +L  + I A+  AA++ I++ K + A  IL K W+V
Sbjct: 239 LSEARDLLSETASLDQQERAIEANRLSPDLIPAAAMAARAHIAKGKPKNAAKILTKAWQV 298

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +  + T   ++KR   L + + +  E+ ++++++ +      +A    
Sbjct: 299 QPHPDLAHAFAEIAPDETPAARIKRFAALAKAHPQHAETRLMMAELNIVAEDFPEARRAL 358

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
              +  AP    + L+A IE+    +   +  W   AL A   P W+ D+  ++ + W P
Sbjct: 359 GDLLDHAPDARAYTLMAAIERGEGASDAVVQGWLARALTAPRGPQWVCDNCQHIHAAWAP 418

Query: 408 LSPISKTLCYFEWKIP 423
           +     +     W+ P
Sbjct: 419 VCGNCNSFDTLSWRAP 434


>gi|259417169|ref|ZP_05741088.1| HemY domain protein [Silicibacter sp. TrichCH4B]
 gi|259346075|gb|EEW57889.1| HemY domain protein [Silicibacter sp. TrichCH4B]
          Length = 497

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 189/447 (42%), Gaps = 16/447 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +L+++ +  +++L+     ++      V IT     Y       +++++   +  W+   
Sbjct: 5   LLKILVFVAIVALMAFGAGVLMETAGGVQITVAGIEYTLGALQSVMALVALMVLTWLFFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  RF       L     K    +GY+AL   LM++A      A  +      +
Sbjct: 65  LLSLLIATLRFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LSKAAKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               +  L  L+  Q A      + A E  + +L   +TR   V  +  +    GD  +A
Sbjct: 123 RYLQDPALTDLVVAQAAEMAGDTHKASEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P    V + +++    A++W+ A   L  K K      + + R  A+L 
Sbjct: 183 RQLAEKALALRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S     +         AIE+ +L  + + A+  AA+S I++ K R A  IL+K W+ 
Sbjct: 243 LSSSKALLAEEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEA 302

Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +  +E+   ++KR   L  +  +  E+ ++ +++ +      +A    
Sbjct: 303 QPHPDLAHAFAEIEPNESAQERVKRFETLLRVKPDHDETRLVRAELLIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
              +  AP      L+A IE+        +  W   AL A   P W+ +   ++ + W P
Sbjct: 363 GDLVDRAPDARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSEN 434
                 +     WK P ++PEY S+  
Sbjct: 423 TCENCASFDTLTWKRP-ETPEYHSATG 448


>gi|255264670|ref|ZP_05344012.1| HemY domain protein [Thalassiobium sp. R2A62]
 gi|255107005|gb|EET49679.1| HemY domain protein [Thalassiobium sp. R2A62]
          Length = 484

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/393 (21%), Positives = 168/393 (42%), Gaps = 14/393 (3%)

Query: 43  VILSILYFFLFAWI------LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA 96
           ++L  +      W+      LL A  +F       +    ++    KG+ AL  G+M++A
Sbjct: 48  LVLGAIAIIFLVWLGFKIFGLLVATFKFLNGDETAISRYFNRNRERKGFDALSDGMMALA 107

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +    +A    S    +       L  LL  Q A        A +  + +L+   TR   
Sbjct: 108 SGEGRVALAKASRA--EKYLERPELTNLLTAQAAEMAGDRVKAEQTYKRLLEDDRTRFVG 165

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V  +  +  + GD ++A + A KA  + P    + + +++    + +W+ A   L+ K K
Sbjct: 166 VRGIMKQKLQAGDTDTALKLAEKAFALKPKHVEIQDTLLKLQADSSDWAGARRTLSAKLK 225

Query: 217 NA---KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +    ++ +R R A+L ++ + +    G+ I +   AIE+ +L  + I A++ AA+S I 
Sbjct: 226 SGSLPRDVHRRRDAVLALSEARDILGSGESIEAREAAIEANRLSPDLIPAAVMAARSYIE 285

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIV 331
           Q + R A  +L+K W+  PHP++   +  +  + T V ++KR   L   +    E+ +++
Sbjct: 286 QGQPRYAARVLKKTWEAQPHPDLGAAFAEIAPDETPVARIKRFRALARAHPNHAETQMLM 345

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +++ +      +A           P      ++A IE+    +   +  W   AL A   
Sbjct: 346 AELHIANEDFPEARRALGELATTEPTARSLAIMAAIERGAGADDAVVRGWLTRALSAPRG 405

Query: 392 PLWISDD-GYLSSVWLPLSPISKTLCYFEWKIP 423
           P WI D+   + + W P      +     WK P
Sbjct: 406 PQWICDNCSNIHAAWSPTCDNCGSFDTLTWKTP 438


>gi|126734495|ref|ZP_01750242.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2]
 gi|126717361|gb|EBA14225.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2]
          Length = 457

 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 183/432 (42%), Gaps = 29/432 (6%)

Query: 47  ILYFFLFAWILLFAVSRF-FLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNIPLAR 104
           ++  +L   +L   V+ F FL+           RN + KGY+AL  G+M++A+    LA 
Sbjct: 31  VVAVWLGLKLLALCVATFKFLNGDETAISRYFDRNRERKGYEALSEGMMALASGEGHLA- 89

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
            M              L  LL  Q A        A E  + +L    TR   V  +  + 
Sbjct: 90  -MTKAARADKYLQQPQLTNLLTAQAAEMTGDRKTAEETYKKLLSDDKTRFVGVRGIMKQK 148

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEW 221
              GD ++A   A KA  + P      + +++      +W+ A   L  K K+    ++ 
Sbjct: 149 LSDGDTDTAMALAQKAFALKPKHEETQDVLLRLQAEKSDWAGARKTLGAKLKSGSLPRDV 208

Query: 222 NRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           ++ R A+L ++ + +  D+G  I +   AIE+ +L  + I A+I AA+  I +   R A 
Sbjct: 209 HKRRDAVLALSEARDILDEGKTIEAREAAIEANRLSPDLIPAAIMAARGYIGEGNARYAT 268

Query: 281 VILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +L K+W   PHP+IA  +  +   E++  +LKR  +L +   +  E+ +++++  L + 
Sbjct: 269 RVLTKVWNAQPHPDIAAAFAEIAPDESSDERLKRFTKLTKTTADHPETKMLMAE--LHIA 326

Query: 340 SIDQAHAKAMLA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
           + D   AK  L   ++  P      ++A IE+    +   +  W   AL A   P WI  
Sbjct: 327 AEDFPAAKRALGELVEKDPTARNLTIMAAIERGEGADDSVVRGWLTKALTAPRGPQWICG 386

Query: 398 D-GYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADD--LQSMLNN 454
           +  ++   W        +     WK P  S             ++A PA    L  ++  
Sbjct: 387 NCQHIHPTWAATCDNCGSFDTLAWKTPPAS-------------DVAMPAGTEMLPLIVGQ 433

Query: 455 GKKNHLPSIKKV 466
            K+  LPS + V
Sbjct: 434 TKEAQLPSTEVV 445


>gi|110677862|ref|YP_680869.1| hypothetical protein RD1_0473 [Roseobacter denitrificans OCh 114]
 gi|109453978|gb|ABG30183.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 492

 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 204/491 (41%), Gaps = 32/491 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF--VILSILYFFLFAWILL 58
           ++++I +   ++ +    + +      V +      +  SP   VI +++  F+  W+ L
Sbjct: 5   LIKIILFVVAVAALAMGAVYLLESEGGVQVQVMGTEFTFSPIQSVIAAVVLIFVV-WLFL 63

Query: 59  ------FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112
                  A  RF       +     +    KG++AL  GLM++A+    +A  M+     
Sbjct: 64  KLLSLLVACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MNKAAKA 121

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +   +   L  LL  Q A        A E  + ++   ATR   V  +  +    GD ++
Sbjct: 122 ERYLNKPELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDT 181

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AIL 228
           A + A KA  I P    V + +++     ++WS A   L+ K K     ++ +R R A+L
Sbjct: 182 ALQLAEKAFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHRRRDAVL 241

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            ++ + +       I     AIE+ KL  + I A++ AA   + QN+ R A  +L+K W+
Sbjct: 242 ALSEAKDILSDASSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWE 301

Query: 289 VNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-HA 346
           V+PHP++A  +  +  +E    ++KR + +  I  E+ E+ ++++++ +      +A  A
Sbjct: 302 VHPHPDLAAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRA 361

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405
              LA   A  + +  L+A IE+        +  W   AL     P WI D+  ++   W
Sbjct: 362 LGDLAETDATARSV-TLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHREW 420

Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
            P     ++     WK P  S             EMA P       L  G     P    
Sbjct: 421 GPFCENCESFDTLAWKTPPMS-------------EMAMPGGMQMLPLIVGALEEKPDETS 467

Query: 466 VSSFEDSTIHP 476
               ED+ I P
Sbjct: 468 GDIIEDAEIIP 478


>gi|260431926|ref|ZP_05785897.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415754|gb|EEX09013.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 506

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/450 (21%), Positives = 198/450 (44%), Gaps = 16/450 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-WILL- 58
           +L+++ +  ++ L+      +      V IT        SP   +  L   +FA W+ L 
Sbjct: 5   LLKILVFVVIVGLLAMGAGYLMESSGGVQITALGLEITLSPLQSVIALGVLVFAVWLGLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  +F       L     +    +GY+AL  GLM++A+    +A  +      +
Sbjct: 65  LLGLLIATLKFINGDETALSRYFDRSREQRGYQALADGLMALASGEGRIA--LTKARKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  LL  Q A        A E  + ++  PATR   V  +  +    GD ++A
Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKAAETYKKLVSDPATRFVGVRGILKQKLAEGDEDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P      + +++    A++W+ A + L  K K        + R  A+L 
Sbjct: 183 RKLAEKALQLKPRHEETQDVLLKLQTKAQDWAGARSTLTAKLKAGYLPRDVYRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +  D+   +     AIE+ +L  + + A+  AA++ I++ K R A  IL+K W+ 
Sbjct: 243 LSEAKDILDESATVEQQERAIEANRLSPDLVPAAAMAARAYIAKGKPRAATKILKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  ++ + T   ++KR   L  I+ +  E+ +I +++ +      +A    
Sbjct: 303 QPHPDLAHAFAEIVPDETPEERIKRFATLTRIHPDHPETRLIRAELNIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
              ++       + L+A IE+    +   +  W   AL+A   P W+ ++ + + + W P
Sbjct: 363 GDLVEKGADARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCENCHDIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINF 437
           +     +     W+ P K+PE  ++  ++ 
Sbjct: 423 VCSTCHSFDTLSWQRP-KTPEIATATGVHM 451


>gi|114765154|ref|ZP_01444298.1| HemY domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114542429|gb|EAU45456.1| HemY domain protein [Roseovarius sp. HTCC2601]
          Length = 511

 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/439 (21%), Positives = 180/439 (41%), Gaps = 15/439 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF------VILSILYFFLFA 54
           +L++I +  V++ +      V      + IT G   +   P       ++L I  + +F 
Sbjct: 5   LLKIILFVAVVAALTLGAGYVMESQGGIQITAGGYEFNLGPLQSVIAVIVLVIALYVVFK 64

Query: 55  WI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
            + LL AV +F       L     +    KGY+AL  G++++++    LA  M       
Sbjct: 65  LVSLLIAVLKFINGDDTALSRYFDRNRERKGYQALSEGMLALSSGEGKLA--MAKAQKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              H   L  LL  Q A        A E  + ++    TR   +  +       GD  +A
Sbjct: 123 RYLHRPGLTNLLTAQAAEMTGDTRKAEEVYKKLITNDETRFVGIRGMMKLKLAKGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229
            + A +A  + P  P + + ++Q      +W  A   L+ K K+       + R  A+L 
Sbjct: 183 LKLAERAFALKPKHPEIQDTLLQLQAQKHDWRGARQTLSAKLKHGSLPRDVYRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +   I +   AI S K   + I  +  AA++ I++ +++KA  IL+K W V
Sbjct: 243 LSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARAYIARGEQKKAVRILKKTWSV 302

Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   ++KR   +  I  +  E+ ++ +++AL      +A    
Sbjct: 303 QPHPDLAAAFAEIAPDETPAERMKRFRTITSIRPDHRETRLLRAELALAAEDFPEARRAM 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P      ++A I +       ++  W   AL A   P W+ D   ++   W+P
Sbjct: 363 GDLVDKEPDARTLTVMAAIARGEGAPETEVRGWLAKALVAPRGPQWVCDSCHHIHGEWVP 422

Query: 408 LSPISKTLCYFEWKIPTKS 426
           +           W  P +S
Sbjct: 423 VCENCGGFDTLSWTTPPQS 441


>gi|163732926|ref|ZP_02140370.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149]
 gi|161393461|gb|EDQ17786.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149]
          Length = 495

 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 179/424 (42%), Gaps = 23/424 (5%)

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           A  RF       +     +    KG++AL  GLM++A+    +A  M   V  +   +  
Sbjct: 71  ACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MTKAVKAERYLNKP 128

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q A        A E  + ++   ATR   V  +  +    GD ++A + A K
Sbjct: 129 ELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDTALQLAEK 188

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSLE 235
           A  I P    V + +++     ++WS A   L+ K K     ++ ++ R A+L ++ + +
Sbjct: 189 AFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHKRRDAVLALSEAKD 248

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
                  I     AIE+ KL  + I A++ AA   + QN+ R A  +L+K W+V+PHP++
Sbjct: 249 ILSDQSSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWEVHPHPDL 308

Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-HAKAMLAMK 353
           A  +  +  +E    ++KR + +  I  E+ E+ ++++++ +      +A  A   LA  
Sbjct: 309 AAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRALGDLAET 368

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPIS 412
            A  + +  L+A IE+        +  W   AL     P WI D+  ++   W P     
Sbjct: 369 DATARSV-TLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHQEWGPFCENC 427

Query: 413 KTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
           ++     WK P  S             EMA P       L  G     P  K     ED+
Sbjct: 428 ESFDTLAWKAPPLS-------------EMAMPGGVQMLPLIVGALEEKPEEKTGDIIEDA 474

Query: 473 TIHP 476
            I P
Sbjct: 475 EIIP 478


>gi|260429364|ref|ZP_05783341.1| HemY domain protein [Citreicella sp. SE45]
 gi|260419987|gb|EEX13240.1| HemY domain protein [Citreicella sp. SE45]
          Length = 514

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/441 (21%), Positives = 186/441 (42%), Gaps = 19/441 (4%)

Query: 1   MLRLIRYFFVISLVI--CSFIIVSHYPEDVSITWGNRLYRTSPF------VILSILYFFL 52
           +L++I +  V++ +     +++ SH    + IT G   +   P       ++L I  + +
Sbjct: 5   LLKIILFVAVVAALTLGAGYVMESHG--GIQITAGGYEFNLGPLQSVIAVIVLVIALYVV 62

Query: 53  FAWI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111
           F  + LL A+ +F       L     +    KGY AL  G++++++    LA  M     
Sbjct: 63  FKLVSLLIALLKFINGDDTALSRYFDRNRERKGYHALAEGMLALSSGEGKLA--MAKAQK 120

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                H   L  LL  Q A        A E  + ++    TR   +  +       GD +
Sbjct: 121 ADRYLHRPALTNLLTAQAAEMTGDTRKAEEVYKKLIANDETRFVGIRGMMKLKLAKGDTD 180

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAI 227
           +A + A +A  + P    + + ++Q      +W  A   L+ K K+       + R  A+
Sbjct: 181 TALKLAERAFALKPKHAEIQDTLLQLQAQKHDWRGARQTLSAKLKHGALPRDVYRRRDAV 240

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L ++ + +   +   I +   AI S K   + I  +  AA+S I++ + +KA  +L+K W
Sbjct: 241 LALSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARSYIAKGEPKKAVRVLKKTW 300

Query: 288 KVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            V PHP++A  +  ++ + T   ++KR   L  +     E+ ++ +++AL      +A  
Sbjct: 301 SVEPHPDLAAAFAEIVPDETPAERMKRFRALTSLRVNHRETRLLKAELALAAEDFPEARR 360

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405
                ++  P   +  ++A I +       ++  W   AL A   P W+ D   ++ + W
Sbjct: 361 ALGDLVETEPDARVLTIMAAIARGEGAGEAEVRGWLAKALVAPRGPQWVCDSCNHIHAEW 420

Query: 406 LPLSPISKTLCYFEWKIPTKS 426
           +P+           WK P +S
Sbjct: 421 VPICENCGGFDTLSWKTPPQS 441


>gi|126724569|ref|ZP_01740412.1| HemY domain protein [Rhodobacterales bacterium HTCC2150]
 gi|126705733|gb|EBA04823.1| HemY domain protein [Rhodobacterales bacterium HTCC2150]
          Length = 488

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 187/440 (42%), Gaps = 29/440 (6%)

Query: 8   FFVISLVICSFII--VSHYPEDVSITWGNRLYRTSPF---------VILSILYFFLFAWI 56
           FFV++++  +F +  ++     + I +GN  Y   P          V+   L   L  ++
Sbjct: 10  FFVVAIIALAFGVNYLTSMSGGIQIAFGNTEYTLGPLQSIVALILLVLTLYLILKLIGFV 69

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           L F   RF       +          KGY+AL  GLM++A+    +A  +      +   
Sbjct: 70  LAFV--RFLNGDETAISRYFSANRERKGYQALSDGLMALASGEGRVA--LSQAERARRLL 125

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           +   L  L+  Q A  E     A +    +L+   TR   V  +  +    GD  +A++ 
Sbjct: 126 NKPELTNLISAQAAEMEGDTKKAKDIYVELLKDERTRFVGVRGIMKQKLAEGDTETAKKL 185

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIAR 232
           A KA D+ P      + ++Q     ++W+ A   LN K  N    ++ ++ R A+L ++ 
Sbjct: 186 AEKAFDLKPKHNETGDVLLQLQAENEDWAGARKTLNTKVSNGVLPRDVHKRRDAVLALSE 245

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + +       + +   AIE+ +L  + I A++ AAK+ + Q K R A  +L   WK  PH
Sbjct: 246 ARDIFANAGAVEAQVAAIEANRLSPDLIPAAVMAAKAYMEQEKPRYATRVLIAAWKSQPH 305

Query: 293 PEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           P++A  +  ++ +E T  ++KR   L + + +  E+ +++++  L +   D A A+  L 
Sbjct: 306 PDLAAGFADIVPTETTKARIKRFAGLIKSDPDHAEARLLMAE--LHIADEDFAGARKALG 363

Query: 352 M----KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406
                 +  R     ++A IE+    +   +  W   AL A   P W  D   ++ S W 
Sbjct: 364 GLNDDYLTSRS--LTIMAAIERGEGSDDAIVRGWLTKALGASRGPQWTCDKCNHVHSNWT 421

Query: 407 PLSPISKTLCYFEWKIPTKS 426
            +           WK P + 
Sbjct: 422 AICDRCSGFDTLAWKTPAEG 441


>gi|83594895|ref|YP_428647.1| HemY-like [Rhodospirillum rubrum ATCC 11170]
 gi|83577809|gb|ABC24360.1| HemY-like [Rhodospirillum rubrum ATCC 11170]
          Length = 433

 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 22/410 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +  L++   + ++ +P  V++ W      TS  V+L I    L   +L F 
Sbjct: 1   MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLL-ITLVVLIGLLLFF- 58

Query: 61  VSRFF---LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
            SRFF   L  P       +++   +G  A+  G+ +    ++ LARK+      +    
Sbjct: 59  -SRFFGGILGIPQWWRRRRNEKKLRRGSLAVGEGIAAARGGDVHLARKL--LKDAERLLP 115

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
                  L    A A  + ++A +   +ML+ P T+      L   +   GDL+ A    
Sbjct: 116 GAAGTQQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLDLALTRGDLDKAYAIV 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLI--A 231
            +A+    DAPW T  + +  +L ++W+ A + L    N   K   +    +A LL   A
Sbjct: 176 REAVATGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQA 235

Query: 232 RSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           R  E     GD +     A+E   L   S  A++ AA+ L +  ++RKA  +L  +W  +
Sbjct: 236 RDAELPGRGGDALRLSQQAVE---LDPTSREATLIAARQLAATGRQRKAAQLLIALWAKH 292

Query: 291 PHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           PHP +A  Y  L   E+++  ++ A  L   N E   S  + ++ AL+     +A     
Sbjct: 293 PHPSLAQAYLALWTGEDSLKIVRHAQELTGANPEHPMSRRVFAEAALDAQLWGEARQSLE 352

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399
             ++  P   I  L+A++E+    +      W + AL A P+   + +DG
Sbjct: 353 PLLRDVPSATICRLMARLEEGEKGDVTAANQWLRRALEAGPE---VEEDG 399


>gi|163742569|ref|ZP_02149955.1| HemY domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161384154|gb|EDQ08537.1| HemY domain protein [Phaeobacter gallaeciensis 2.10]
          Length = 507

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 199/447 (44%), Gaps = 20/447 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF---VILSILYFFLFAWIL 57
           +L+++ +  +++++     +++     V IT     Y  S     + L+IL F +  W+L
Sbjct: 5   LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVV--WVL 62

Query: 58  LFAVS------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111
              +S      RF       +     K    KGY+AL  GLM++A+    LA  M     
Sbjct: 63  FKLLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAAR 120

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
            +       L  LL  Q A        A E  + ++   +TR   V  +  +    GD +
Sbjct: 121 AEKYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTD 180

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAI 227
           +A++ A KAL + P    V + ++     A++W+ A   L  K K        + R  A+
Sbjct: 181 TARQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAV 240

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L ++ S     +G  +     AIE+ +L  + + A+  AA++ ++++KKR A  +L+K W
Sbjct: 241 LALSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAW 300

Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +  PHP++A+ +  +  +E    ++KR  +L  +  +  E+ ++++++ +      +A  
Sbjct: 301 EAQPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARR 360

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405
                ++  P      L+A IE+    +   I  W   AL+A   P W+  +  ++ + W
Sbjct: 361 ALGDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEW 420

Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISS 432
            P+     +     W+ P ++PE + +
Sbjct: 421 APVCENCASFDTLSWRRP-EAPEIVGA 446


>gi|163738035|ref|ZP_02145451.1| HemY-like protein [Phaeobacter gallaeciensis BS107]
 gi|161388651|gb|EDQ13004.1| HemY-like protein [Phaeobacter gallaeciensis BS107]
          Length = 507

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 199/447 (44%), Gaps = 20/447 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF---VILSILYFFLFAWIL 57
           +L+++ +  +++++     +++     V IT     Y  S     + L+IL F +  W+L
Sbjct: 5   LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVV--WVL 62

Query: 58  LFAVS------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111
              +S      RF       +     K    KGY+AL  GLM++A+    LA  M     
Sbjct: 63  FKLLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAAR 120

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
            +       L  LL  Q A        A E  + ++   +TR   V  +  +    GD +
Sbjct: 121 AEKYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTD 180

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAI 227
           +A++ A KAL + P    V + ++     A++W+ A   L  K K        + R  A+
Sbjct: 181 TARQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAV 240

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L ++ S     +G  +     AIE+ +L  + + A+  AA++ ++++KKR A  +L+K W
Sbjct: 241 LALSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAW 300

Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +  PHP++A+ +  +  +E    ++KR  +L  +  +  E+ ++++++ +      +A  
Sbjct: 301 EAQPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARR 360

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405
                ++  P      L+A IE+    +   I  W   AL+A   P W+  +  ++ + W
Sbjct: 361 ALGDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEW 420

Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISS 432
            P+     +     W+ P ++PE + +
Sbjct: 421 APVCENCASFDTLSWRRP-EAPEIVGA 446


>gi|21328634|gb|AAM48640.1| conserved hypothetical protein [uncultured marine proteobacterium]
          Length = 491

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 163/377 (43%), Gaps = 9/377 (2%)

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
           RF       L     +    +G++AL  GLM++A+ +   A  M          +   L 
Sbjct: 74  RFINGDETALSRYFDRNRERRGFEALSDGLMALASGDGRDA--MAKARKADRLLNRPDLT 131

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L+  Q A+A      A    + +L+ P TR    Y L  +  + GD   A + A  A  
Sbjct: 132 NLIMAQAAVANGDRQTAKATYKKLLKDPKTRFVGTYGLLQQHLQDGDTEVALKLAEHAFG 191

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSLENAD 238
           + P      + +++     ++W    T L  K K+    K+ ++ R A+  +++S +   
Sbjct: 192 LKPRHGETQDVLLKLQAGREDWRGVRTTLTAKLKHGSLPKDVHKRRDAVFALSQSRDLRA 251

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +G +  +   A+E+ +L    + A+I +A+    Q   ++A  IL   W++ PHP++A  
Sbjct: 252 EGKLDEAQIYAVEANRLAPGLVPAAILSAEGHREQKNVKQASRILRAAWQLAPHPDLAAG 311

Query: 299 YTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  L   E +  +LKR  +  +  +   E+ ++++++ + M   D A        K  P 
Sbjct: 312 FAALAPDEASAARLKRFGQFTKGTESHPETKMLMAELYVAMADFDAARQALGDLAKTDPT 371

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKTLC 416
                +LA IE+ +  +   +      A+ A  DP WI D+ G++   W P+    + + 
Sbjct: 372 MRALTILAAIERGDGADDQSVRRLLTQAISAQRDPQWICDNCGHVHHDWEPVCLNCEAID 431

Query: 417 YFEWKIPTKSPEYISSE 433
              WK P  S E +S +
Sbjct: 432 SIAWKRPPMS-EAVSPD 447


>gi|85705790|ref|ZP_01036887.1| HemY domain protein [Roseovarius sp. 217]
 gi|85669780|gb|EAQ24644.1| HemY domain protein [Roseovarius sp. 217]
          Length = 490

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 166/395 (42%), Gaps = 12/395 (3%)

Query: 42  FVILSILYFFLFAWI----LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97
            + L +L F ++  +    LL A  +F       L     +   DKGY+AL  G++++A+
Sbjct: 49  VIALGVLVFAIWLLMKLTGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALAS 108

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
               +A  M      +       L  L+  Q A      + A E  + +L    TR   V
Sbjct: 109 GEGEVA--MAQAAKAEKYLRKPALTNLITAQAAEMAGNRSKAEEVYKRLLTNEKTRFVGV 166

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  +    GD  +A + A  A  + P    V + ++       +W  A   LN K K 
Sbjct: 167 RGILRQKLAEGDTETALKLAKTAFTLKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKY 226

Query: 218 A---KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
               ++ ++ R A+L ++ + +  D+G  I +   AIE+ +L  + I A++ AA+  I Q
Sbjct: 227 GNLPRDVHKRRDAVLALSEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQ 286

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVS 332
              R A  ++ K W V+PHP +A ++  +  + T   +LKR  +L +++ +  E+ ++ +
Sbjct: 287 GNTRNALRVINKAWLVHPHPNLAAVFAAIEPDETPNQRLKRFAKLLKVHPDHRETRLLAA 346

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           ++ L       A        ++ P      ++A IE+        +  W   AL A   P
Sbjct: 347 ELNLAAEDFPAARRALGNLAEVEPDARAVTIMAAIERGEGAPDAVVKGWLARALSAPRGP 406

Query: 393 LWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426
            W+ D   ++   W P      +     W+ P  S
Sbjct: 407 QWVCDKCQHIHVEWSPTCENCNSFDTLSWRAPPNS 441


>gi|114769711|ref|ZP_01447321.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium
           HTCC2255]
 gi|114549416|gb|EAU52298.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium
           HTCC2255]
          Length = 478

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 183/440 (41%), Gaps = 29/440 (6%)

Query: 43  VILSILYFFLFAWI--LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100
           +IL +       W+  +L A+ +FF      +    +K   ++GYKAL   ++S+AA   
Sbjct: 52  IILCMSSLLATKWLFGILVAIFKFFNGDETAITRYFNKNKEERGYKALADSMVSMAAGEG 111

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A  +++    +       L  L+  Q A        A +  + +L+   TR   +  L
Sbjct: 112 KDA--INNANRAERLLQRPQLTNLVSAQAAEKFGDNKRALKYYKRLLKNDQTRFVGLQGL 169

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             +    GD  +A   A KA  I P+       +       ++W  A   +    +  K 
Sbjct: 170 LKQKLLEGDNETALLLAEKAFSIRPNHDQTLNVLFDLQTEKQDWKGAQKTIKANVRAGKL 229

Query: 221 WN----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                 R  AILL+A +    + G++      AI + K   + I A+I AA+  +  N K
Sbjct: 230 PKDIGLRREAILLLADAKAMLEAGEIDTGKAAAIAANKSSPDLIPAAILAAEMYMLDNNK 289

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           R +  IL+K W +NPHP++A  +  + L E +  + KR     ++  E  E+ ++++++A
Sbjct: 290 RASTKILKKTWGLNPHPDLATAFAEINLKETSGERRKRFSSFVKLKSEHYETKLLLAELA 349

Query: 336 LEMGSIDQAHAKAMLAMK----IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +     D+    A  A+K      P      L+A IE+    +   +  W   AL A   
Sbjct: 350 IG----DEDFPAARRAIKDLTSTNPTVRSLALMAAIEKGEGADEKTVRAWLNKALTASRG 405

Query: 392 PLWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQS 450
           P WI +    +   W P     +T     WK P +  + I++E ++F+           +
Sbjct: 406 PQWICEKCSNIHLSWQPRCENCETFDSLSWKAPPRDAKKITNEKLDFT-----------A 454

Query: 451 MLNNGKKNHLPSIKKVSSFE 470
            +  G +N LPS+  +   E
Sbjct: 455 GILTGAENSLPSVSDIDDAE 474


>gi|254451402|ref|ZP_05064839.1| HemY domain protein [Octadecabacter antarcticus 238]
 gi|198265808|gb|EDY90078.1| HemY domain protein [Octadecabacter antarcticus 238]
          Length = 490

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 13/394 (3%)

Query: 42  FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNI 100
            ++L    + +F  I L   +  FL+           RN + KGY+AL  G+M++A+   
Sbjct: 52  LIVLVASIWLVFKLIGLAIATFKFLNGDETAISRYFSRNRERKGYEALSEGMMALASGEG 111

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            LA  M      +       L  LL  Q A        A      +L+   TR   V  +
Sbjct: 112 RLA--MAKANRAEKFLERPELTNLLTAQAAELAGDRKTAELTYRKLLEDDKTRFVGVRGI 169

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-- 218
             +  + GD ++A   A KA  I P      + +++      +W  A   L  K K    
Sbjct: 170 MKQKLQDGDTDTALLLAQKAFAIKPKHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQL 229

Query: 219 -KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +  +R R A+L ++ + +   +G  + +   AIE+ ++  + + A++ AA++ +++N  
Sbjct: 230 PRNVHRRRDAVLALSEAKDVFAEGATLEAQEAAIEANRMSPDLVPAAVMAAQAHVAKNSS 289

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           R A  +++K W V PHP++A+ +  +   E+   ++KR   L +++    E+ +++++  
Sbjct: 290 RAATRVIKKAWDVAPHPDLASAFAAIAPDEDPAARVKRFSTLTKVHPNHPETRMLLAE-- 347

Query: 336 LEMGSIDQAHAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
           L + + D   A+  +   +A  P      ++A IE+        +  W   AL A   P 
Sbjct: 348 LNIAAEDFPEARRAITELVAKDPTARSLTIMAAIERGEGSADAVVRGWLAKALTATRGPQ 407

Query: 394 WISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426
           WI D+  ++  VW P+           W+ P K 
Sbjct: 408 WICDNCQHIHPVWAPICVNCSGFDTLAWREPPKG 441


>gi|254465019|ref|ZP_05078430.1| HemY domain protein [Rhodobacterales bacterium Y4I]
 gi|206685927|gb|EDZ46409.1| HemY domain protein [Rhodobacterales bacterium Y4I]
          Length = 498

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 193/444 (43%), Gaps = 16/444 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           +L+++ +  +++L+     ++      V IT     Y  S    ++++    +  W+ L 
Sbjct: 5   LLKILVFVAIVALLAFGAGLLMETAGGVQITVAGTEYTLSALQSVIALGVLVVAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  RF       L     K    KGY+AL  GLM++A+        +      +
Sbjct: 65  LLSLLVATLRFLNGDETALSRYWDKGRERKGYRALSEGLMALASGEG--RLALAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               N  L  LL  Q A      + A +  + +L    TR   V  +  +    GD ++A
Sbjct: 123 KYLQNPELTDLLVAQAAEMSGDTHKAADAYKRLLSNQQTRFVGVRGIMKQKLSQGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P    V + +++    A++W+ A   L+ K K        + R  A+L 
Sbjct: 183 RQLAEKALALRPKHEEVQDTLLRLQAQAEDWAGARKTLSTKLKTGTLPRDVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S    D+   I     AIE+ +L  + + A+  AA++ +++ KKR A  +L+K W+ 
Sbjct: 243 LSASKGVIDENATIEQREQAIEANRLSPDLVPAAAMAARAYLAKGKKRPAVRLLKKTWQS 302

Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E+   ++ R  +L  +N +  E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEVEPDESAAERVARFDQLARLNPQDDETRLVMAELNIVAEDFPEARRWL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI-SDDGYLSSVWLP 407
               + AP      L+A IE+    +   +  W   AL +   P W+ S+  ++   W P
Sbjct: 363 SDLTERAPDARALTLMAAIERGEGADDKVVQGWLTRALTSPRGPQWVCSNCNHIHVEWEP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYIS 431
           +     +     WK P ++PE  S
Sbjct: 423 VCEHCTSFDTLSWKRP-ETPEVAS 445


>gi|84514840|ref|ZP_01002203.1| HemY domain protein [Loktanella vestfoldensis SKA53]
 gi|84510999|gb|EAQ07453.1| HemY domain protein [Loktanella vestfoldensis SKA53]
          Length = 479

 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 158/371 (42%), Gaps = 21/371 (5%)

Query: 60  AVSRFFLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118
           A+SR+F             RN + KGY+AL  G+M++A+    LA  M      +   H 
Sbjct: 82  AISRYF------------DRNRERKGYEALAEGMMALASGEGHLA--MTKAARAEKYLHQ 127

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             L  LL  Q A        A E  + +L    TR   V  +  +    GD + A + A 
Sbjct: 128 PQLTNLLTAQAAEMTGDRRKAEETYKKLLADDRTRFVGVRGIMKQKLAEGDTDLALKLAQ 187

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSL 234
           KA  + P      + ++Q      +W  A   L  K K+    ++ ++ R A+L ++ + 
Sbjct: 188 KAFALKPKHAETQDVLLQLQADKADWKGARQTLGAKLKSGTLPRDVHKRRDAVLALSEAR 247

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +  D+G+ I +   AI + +L  + I A++ AA+  I+Q   R A  +L K W   PHP+
Sbjct: 248 DILDEGNPIEAREAAIAANRLSPDLIPAAVMAARGYIAQGNARYASRVLVKTWTAQPHPD 307

Query: 295 IANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           IA  +  ++ + T   +LKR   L +   +  E+ ++++++ +       A       ++
Sbjct: 308 IATAFAEIVPDETPQARLKRFATLTKATPDHPEAKMLMAELHVAAEDFPAARRDIADLVE 367

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPIS 412
             P      L+A +E+    +   +  W   AL A   P WI D   ++   W P+    
Sbjct: 368 TDPTARSLALMAAVERGVGADDAVVRGWLTRALTAPRGPQWICDKCQHIHPQWGPVCGNC 427

Query: 413 KTLCYFEWKIP 423
                  WK P
Sbjct: 428 AAFDTLSWKRP 438


>gi|99082666|ref|YP_614820.1| HemY-like [Ruegeria sp. TM1040]
 gi|99038946|gb|ABF65558.1| HemY-like protein [Ruegeria sp. TM1040]
          Length = 494

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 164/391 (41%), Gaps = 9/391 (2%)

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
           RF       L     K    +GY+AL   LM++A      A  +      +    +  L 
Sbjct: 74  RFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LTKAAKAERYLQDPALT 131

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L+  Q A      + A E  + +L   +TR   V  +  +    GD  +A++ A KAL 
Sbjct: 132 DLVVAQAAEMAGDTHKAAEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETARQLAEKALA 191

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENAD 238
           + P    V + +++    A++W+ A   L  K K      + + R  A+L ++ S     
Sbjct: 192 LRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLALSSSKALLA 251

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +         AIE+ +L  + + A+  AA+S I++ K R A  IL+K W+  PHP++A+ 
Sbjct: 252 EEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEAQPHPDLAHA 311

Query: 299 YTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  +  +E    ++KR   L  +  +  E+ ++ +++ +      +A       +  AP 
Sbjct: 312 FAEIEPNETAEARVKRFEPLLRLKPDHDETRLVRAELLIVAEDFPEARRALGDLVDRAPD 371

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKTLC 416
                L+A IE+        +  W   AL A   P W+ +   ++ + W P      +  
Sbjct: 372 ARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAPTCENCASFD 431

Query: 417 YFEWKIPTKSPEYISSENINFSLEMAYPADD 447
              WK P ++PEY S+        +A   DD
Sbjct: 432 TLTWKRP-ETPEYHSATGAAMLPLLAGRQDD 461


>gi|119384727|ref|YP_915783.1| HemY domain-containing protein [Paracoccus denitrificans PD1222]
 gi|119374494|gb|ABL70087.1| HemY domain protein [Paracoccus denitrificans PD1222]
          Length = 596

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 170/420 (40%), Gaps = 38/420 (9%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLF- 59
           L+++ +F ++ ++    + +S     +S+ +G+  Y   P  ++++ L   L  WI +  
Sbjct: 22  LKILIFFAIVLVLTLGAMQLSETGHGLSMVYGSTEYTLGPVQLVIAALVVVLLGWITVRL 81

Query: 60  ----------------AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA 103
                           A++R+F            +    KGY AL  G++++A+      
Sbjct: 82  LGLFLAFLRFLLGDETAINRYFA-----------RSRERKGYDALSEGMLAVASGE--GK 128

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
                           ++  LL  Q A        A E    +L  P TR   +  L  +
Sbjct: 129 LAQDKAAKAAKFLDKPHVTDLLAAQAAEVAGDSRKAGEVYRRLLSDPRTRFVGIRGLMRQ 188

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN- 222
               GD  +A + A KA  + P    V + ++Q      +W  A   L  K++  +    
Sbjct: 189 KLDEGDTVTALKLAEKAYALKPKHAEVQDTLLQLQTRQGDWKGARAVLKDKRQQGQLPKD 248

Query: 223 ---RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              R  A+L +  + E    G+ I++   AI + +   + I A++ AA+S I+QN  R A
Sbjct: 249 VHIRRDAVLALKEASEVLAHGNSISAREAAISANRASPDLIPAAVLAARSYIAQNDPRNA 308

Query: 280 EVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             +L+K W V PHP IA  Y  ++  E    +L+R   L   N +  E+ ++ +++ L  
Sbjct: 309 GRVLQKTWSVRPHPSIAATYAEIVPDEKPAARLRRFEDLMRQNPDHEETRLLRAELLLAA 368

Query: 339 GSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
                A  A   LA K  P      +LA +E+    +   +      AL A   P W+ D
Sbjct: 369 EDFPGARRALGDLAEK-HPTVRSLSILAAVERGEGGDDAVVRGILARALVASRGPQWVCD 427


>gi|159045958|ref|YP_001534752.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12]
 gi|157913718|gb|ABV95151.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12]
          Length = 502

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/440 (21%), Positives = 183/440 (41%), Gaps = 17/440 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSP-------FVILSILYFFLF 53
           +L+++ +  +++ +     ++    E V I+  +  +  SP        V+L   Y    
Sbjct: 5   LLKILIFVTLVAALTFGATLLMETGEQVRISLASTEFTLSPVAAVVLSLVLLGAAYLLFK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       +     +    KG++AL  G+M++A+    +A  M      +
Sbjct: 65  LAGLLLATLKFLNGDETAISRYFMRNRERKGFEALAQGMMALASGEGRVA--MAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E  + ML    T+   V  L  +    GD  +A
Sbjct: 123 RYLGRPDLTQLLTAQAAELSGDRAKATETYKKMLTDERTKFVGVRGLLHQKLSEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229
              A KA  + P    V + +++     + W+ A   L  K K+    ++ ++ R A+L 
Sbjct: 183 MALAEKAFALKPRNGEVQDTLLRLQAGDENWAGARKTLAAKLKSGDLPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            + + +  + G M  +   A E+ +L    + ++  AA+  I   K+R+A  +L K W++
Sbjct: 243 YSEAADAVEAGKMDKAEAHANEANRLAPGLVPSAALAARMAIRAGKQRQATKLLRKAWEL 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           NPHPE+A  Y  ++ + T   ++KR   L + N    ES ++++++ +       A  KA
Sbjct: 303 NPHPELAAAYAEIVPDETAAARIKRFEALVKPNPNHDESRLLMAELFIAAEDFPAAR-KA 361

Query: 349 MLAM-KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406
           M  + +  P      ++A +E+    +   +  W   A+ A   P W  ++   + + W 
Sbjct: 362 MGDLYETKPNARSLTIMAAVERGEGSDDAIVRAWLAKAVTASRGPQWTCENCNNIHASWT 421

Query: 407 PLSPISKTLCYFEWKIPTKS 426
           P+           W  P +S
Sbjct: 422 PVCGNCGAFDSLSWVEPPES 441


>gi|126732179|ref|ZP_01747980.1| HemY domain protein [Sagittula stellata E-37]
 gi|126707261|gb|EBA06326.1| HemY domain protein [Sagittula stellata E-37]
          Length = 518

 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 173/407 (42%), Gaps = 23/407 (5%)

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQ 112
            L A+ RF       L    H+    KGY AL  G+M++A+      I  A+K   Y   
Sbjct: 68  FLVALLRFINGDETALSRHFHRNRERKGYAALSDGMMALASGEGRLAIAKAQKAEKY--- 124

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
               H   L  L+  Q A        A E  + +L    TR   +  +  +    GD N+
Sbjct: 125 ---LHKPELTDLVTAQAAEMMGDRKKAEETYKKLLTRDGTRFVGIRGIMKQKLASGDTNT 181

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAIL 228
           A + A +A  + P    V + ++Q      +W+ A   L  K K+       + R  A+L
Sbjct: 182 ALQLAERAFALKPKHEEVQDTLLQLQAEKADWTGARKTLQAKLKHGTLPRDVYKRRDAVL 241

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            ++++ E  ++ + IA+   AIE+ +   + + A+  AA++ I+Q + R A  +L+K W+
Sbjct: 242 ALSQATEIENRDESIAAAEKAIEANRNSPDLVPAAAKAARAYIAQKRPRNAIRVLKKAWE 301

Query: 289 VNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            +PHP++A  Y  +    T   ++KR + L  IN +  E+ ++ +++ L      +A   
Sbjct: 302 THPHPDLAAAYAEIEPNETPDERIKRFVPLTRINPDHRETRLLKAELNLAAEHFPEARRS 361

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406
               ++  P   +  ++A IE+        +  W   A+ A   P W+ D+   +   W 
Sbjct: 362 LGDLVEKEPDARVLAIMAAIEKGEGAPDQVVRGWLAKAVTAPRGPQWVCDNCKTIHGEWR 421

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINF------SLEMAYPADD 447
           P            WK P +S E +     N       +LE   PA+D
Sbjct: 422 PTCTNCGAFDTLSWKTPAQS-EVVLPAQANMLPLIIGALEDKSPAED 467


>gi|310817089|ref|YP_003965053.1| HemY domain protein [Ketogulonicigenium vulgare Y25]
 gi|308755824|gb|ADO43753.1| HemY domain protein [Ketogulonicigenium vulgare Y25]
          Length = 514

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/520 (20%), Positives = 198/520 (38%), Gaps = 51/520 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLF 59
           +L+++ +  +++ V    + ++  P    +T G       P   +++I    L  W +L 
Sbjct: 5   LLKILTFVVIVTGVTAGAVWLAEMPGGAVVTLGGVEVTLRPLESVVAIAIVMLLFWAVLR 64

Query: 60  -----------------AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN--- 99
                            AVSR+F            +    KG KAL   ++++AA     
Sbjct: 65  LLGLLLAVLRFINGDDTAVSRYF-----------SRGRERKGMKALSDSVLALAAGEAKE 113

Query: 100 -IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            +  A+    Y+      H      +L    A    + ++A E  + +L    TR  A+ 
Sbjct: 114 ALARAKVADKYLGAPDVTH------VLLAHTAERAGETHLAEETYKELLTSDRTRFVALQ 167

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  +    GD  +A + A  A    P+   V + +++    + +W+ A   L +K +  
Sbjct: 168 GLMKQKLTAGDTVTALKLAEAAFKARPENVEVQDVLLRLQAESSDWAGARATLGEKARRG 227

Query: 219 ----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                 + R  A+L ++ +    D    I +   AIE+ +L  + + A++ AA+S I   
Sbjct: 228 ALPRDVYRRRDAVLALSEAQAVFDDKVPIDARERAIEANRLSPDLVPAAVMAARSYIKDG 287

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSK 333
             R A  +L K W+V PHP++A  +  ++  E    +L R   L  +  +  E+ ++ ++
Sbjct: 288 NPRYATRVLRKAWEVQPHPDLAEAFAEIMPDERPDQRLARFETLTNLRTDHAENKMLRAE 347

Query: 334 IALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           + +  G    A  A   L            L+A IE+    +   +  W   AL A   P
Sbjct: 348 LLIANGDFPAARRALGELVEGADATSRSLALMAAIERGMGADESVVRGWLTRALTAPRGP 407

Query: 393 LWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPAD--DLQ 449
            W+    G + + WLP+           W  P  S   +        L +  P    DL 
Sbjct: 408 QWVCGQCGKVHAQWLPVCASCHGFDTLAWTTPPASDFAMPGGAAMLPLIVGAPVAPVDLS 467

Query: 450 SMLNNGKKNHLPSI---KKVSSFEDSTIHPLDPHIRQPDD 486
             +        P+     KV   E+  I P  P +  P++
Sbjct: 468 GDVVEQAVKPAPTPAPQTKVEDAEEEVILPPPPDVELPEE 507


>gi|304320180|ref|YP_003853823.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis
           HTCC2503]
 gi|303299083|gb|ADM08682.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis
           HTCC2503]
          Length = 512

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 174/414 (42%), Gaps = 20/414 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  +I+++  +   ++       I +G+    T+     S+L+       +L  
Sbjct: 1   MIRILVFLTIIAVLAAAITGLASVEGFAVIRFGD----TNITARSSVLFGAALIGAVLLI 56

Query: 61  VSRFFLSC----PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIP----LARKMHSYVSQ 112
            +   LS     P+ +     +R  ++G  AL  GL ++AA +      LAR     + Q
Sbjct: 57  CATLILSGIVRLPSSIRRQRAERRRERGLIALTRGLEAVAAGDASDAQRLARTAQKQLGQ 116

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           Q   +   L  LL  Q A        A +    MLQ P T    +  LY ++   GD   
Sbjct: 117 QG--NEAGLSRLLTAQAAQLAGDEETAQQSFAAMLQAPETEFLGLRGLYLQAMASGDRKE 174

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAIL 228
           A++YA +A  + P A W  ++V    +    W  A   L + +++  E      R  A L
Sbjct: 175 ARQYAERAFKLRPGASWAFQSVYALQLERGAWGEARDALLKAQQHGLEKGEPSRRREAAL 234

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L A +       D   +  +A E+L+       A++ AA+      ++ +A  +L++ W 
Sbjct: 235 LTAMAYGAEAAEDTDTAIKEAEEALRKAPGFAPAAVLAAELETKAGRRSRAGKLLDEAWA 294

Query: 289 VNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           ++PHP +A     + + E    +  R + L     E+ ES +++++    +G   +A A+
Sbjct: 295 ISPHPALAKTMDEIYAKEKLERRTDRLIALANKRPEADESQLLIAEQENRLGKFTEAKAR 354

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL 401
               +   PR   F  +A   +   + ++    W   A +A  DP+  +D  ++
Sbjct: 355 LEPLLTRNPRARTFSAMAAAVR-GLYGSEAAQIWLDRAANAPLDPVPGADGSFV 407


>gi|46201304|ref|ZP_00208051.1| hypothetical protein Magn03009978 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 426

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 184/428 (42%), Gaps = 11/428 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  +  L +   + ++  P +V+I W      TS  V+L++L   L A  +L  
Sbjct: 1   MRRFLAFLVLTGLAVAGAVWLADRPGEVTIRWQGWRADTSVPVLLAVLALLLLALSVLIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P      L      KGY AL  GL + A+ +   A K+     +    H+  
Sbjct: 61  LIRLVFGAPKRWLAALRLSRQRKGYAALSDGLAAAASGDAARAAKLARKADK--LLHDPA 118

Query: 121 LVYLLEVQIA-LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           +  LL  Q A L+   + +A E+   M +   T       L   + + GD  +A+  A K
Sbjct: 119 ITGLLSSQAARLSGDDHQLA-ERFRAMTERKETAFLGHQGLAELAVKAGDRTTARAEAAK 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235
           A DISP AP ++  ++  ++ A  W+ A       +++      ++ R RA++L+ R+ +
Sbjct: 178 AFDISPTAPDLSVLLLDLHMEAGAWAEAEQVARLARRHGSLSEADFTRRRALILLGRAED 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-E 294
           +   GD   +   A +S         A   AA  L  + K RKA  +L+  +K + HP  
Sbjct: 238 SMAAGDEAQALDWAQDSRDADPQFTPAVALAADLLRRRGKGRKAASLLKSAFKTHAHPLL 297

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           IA   T    E+ + ++KR   L + N  S E  V +++ AL       A +    A+  
Sbjct: 298 IAKWLTLGEGESALDRVKRLQDLSQANPASPEGHVALAEAALAAQLWGLARSHLEKALTQ 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLWISDD-GYLSSVWLPLSPIS 412
            P + +F LLAQ+E+    +      W  ++   ++P+P W+    G+ S  +    P  
Sbjct: 358 RPTRTVFQLLAQVERDERKDETAAHGWLMKAGTDSVPEPAWVCGGCGHHSPDFALCCPAC 417

Query: 413 KTLCYFEW 420
                 EW
Sbjct: 418 GAAGRLEW 425


>gi|254438357|ref|ZP_05051851.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307]
 gi|198253803|gb|EDY78117.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307]
          Length = 475

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/392 (22%), Positives = 168/392 (42%), Gaps = 10/392 (2%)

Query: 43  VILSILYFFLFAWILLFAVSRF-FLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNI 100
           +I+ +   +L + ++  AV+ F FL+           RN + KGY+AL  G++++A+   
Sbjct: 37  LIILVALVWLVSKLVGLAVAAFKFLNGDETAISRYFSRNRERKGYEALSEGMLALASGEG 96

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            LA  M      +       L  LL  Q A        A      +L    TR   V  +
Sbjct: 97  RLA--MAKANRAEKFLERPELTNLLTAQAAELAGDRKTAELTYRKLLANDKTRFVGVRGI 154

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-- 218
             +  + GD ++A   A KA  I P      + +++      +W  A   L  K K    
Sbjct: 155 MKQKLQDGDTDTALLLAQKAFAIKPKHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQL 214

Query: 219 -KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +  +R R A+L ++ +     +G  + +   AIE+ ++  + + A++ AA+S +++N  
Sbjct: 215 PRNVHRRRDAVLALSEAKGVFAEGATLEAQEAAIEANRMSPDLVPAAVMAAQSHVNKNAD 274

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           R A  +++K W + PHP++A  +  +   E+   +LKR   L + + +  E+ ++++++ 
Sbjct: 275 RAATRVIKKAWDIAPHPDLAAAFAAIAPHEDPAVRLKRFGALTKAHPDHPETRMLLAELN 334

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395
           L      +A       +   P      ++A IE+        +  W   AL A   P WI
Sbjct: 335 LAAEDFPEARRAITELVAQDPTARSLTIMAAIERGEGSTDAVVRGWLSKALIATRGPQWI 394

Query: 396 SDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426
            D+  ++   W+P+           W+ P K 
Sbjct: 395 CDNCQHIHPAWVPVCVNCSGFDTLAWREPPKG 426


>gi|260575763|ref|ZP_05843759.1| HemY domain protein [Rhodobacter sp. SW2]
 gi|259021916|gb|EEW25216.1| HemY domain protein [Rhodobacter sp. SW2]
          Length = 491

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 154/385 (40%), Gaps = 10/385 (2%)

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           LL AV +F       +     +    KGY+AL  G++++A+    +A  +      Q   
Sbjct: 69  LLVAVLKFLNGDETAVSRYFDRNRERKGYQALSEGMIALASGEARVA--LSRAAKAQKYL 126

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L  LL  Q A        A E  + +L    TR   V  L  +    GD  +A + 
Sbjct: 127 GKPELTTLLTAQAAELAGDSARATEAYKALLTDEKTRFVGVRGLMLQKVASGDKATALKL 186

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232
           A KA  + P      + ++Q      +W  A T L  K +      + + R  A+L +  
Sbjct: 187 AEKAFAMKPRHTETQDVLLQLQASQADWKGARTTLGAKLRAGTLPREVFRRRDAVLALQE 246

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +    D+   I S   AIE+ KL  + I A+  AA+S I++   + A  +L+K W+  PH
Sbjct: 247 AKTVFDESASIESREAAIEANKLSPDLIPAAAMAARSYIAKGDAKNATRVLKKAWEARPH 306

Query: 293 PEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           P++A  +  +  +E+   +LKR   L  I+    E+ ++++++ L       A       
Sbjct: 307 PDLAAAFAEIEPTESAQARLKRFKLLTAIHPTHEETRLLLAELNLAAEDFPAARRIIGDL 366

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLPLSP 410
               P      ++A IE+    +   +  W   AL A   P W  D    + + W P+  
Sbjct: 367 ATSHPTGRSLAIMAAIERGEGADDAVVRGWLARALTAPRGPQWCCDKCQGIHAQWTPICD 426

Query: 411 ISKTLCYFEWKIPTKS--PEYISSE 433
                    W+ P +   P    +E
Sbjct: 427 NCGAFDTLSWREPPEGSRPSSTGTE 451


>gi|89056574|ref|YP_512025.1| HemY-like [Jannaschia sp. CCS1]
 gi|88866123|gb|ABD57000.1| HemY-like protein [Jannaschia sp. CCS1]
          Length = 509

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/501 (20%), Positives = 193/501 (38%), Gaps = 26/501 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPE----DVSITWGNRLYRTSPFVILSILYFFLFAWIL-- 57
           L++    I++V+ +   ++   E     + I +G     T    ++  +   L  WIL  
Sbjct: 6   LLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAVWILFK 65

Query: 58  ----LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
               L A  R        L     +R+  KGY AL   +M++AA    LA  +      +
Sbjct: 66  VVGLLVAFLRMLNGDETALTRYWSRRSERKGYDALGDAMMALAAGEGRLA--IRKAERAR 123

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  L+  Q A       +A E  + M+    TR   V  L  +    GD ++A
Sbjct: 124 KALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDDRTRFVGVRGLMQQRLDDGDTDTA 183

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229
            + A KAL + P    V   ++      ++W  A   L    K     ++ +R R A+L 
Sbjct: 184 LKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDAVLA 243

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A + +   +G ++ +  D  E+ +L    + A++ + +  +    KR+A   + K W  
Sbjct: 244 LAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKAWDQ 303

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            PHP++A  +  L+  +    L+       + K      V + +  L + + D   A+  
Sbjct: 304 APHPDLAAAFA-LIEPDETPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAARKA 362

Query: 350 LA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406
           L    + AP      ++A +E+        +  W   A+ A     W+ D+ G++   W 
Sbjct: 363 LGDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARAVTAPRGNQWLCDNCGHVHEDWT 422

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
           P+    ++    +W  P +S   ++       L +    D  QS          P  ++ 
Sbjct: 423 PVCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALED--QSDAPEAAPEAGPDAEEE 480

Query: 467 SSFEDSTIHPLDPHIRQ--PD 485
           +   D T  P +P   Q  PD
Sbjct: 481 AEILDDT--PAEPEAAQVTPD 499


>gi|114568597|ref|YP_755277.1| HemY domain-containing protein [Maricaulis maris MCS10]
 gi|114339059|gb|ABI64339.1| HemY domain protein [Maricaulis maris MCS10]
          Length = 492

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 209/507 (41%), Gaps = 43/507 (8%)

Query: 1   MLRLIRY--FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL 58
           M+RLI    F +++ V+ +F+ ++  P   S  +   +    PFV+ + L   L   +L+
Sbjct: 1   MIRLILAVAFALLTAVLGAFLALN--PGHASFEFLG-MQTEMPFVVAAGLVILLAFLMLV 57

Query: 59  FAVSRFFL-SCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
                + L + P  +   + +R  ++GY AL   L++ AA +   A  +           
Sbjct: 58  VWWGIYMLWTSPDKVKGFMGRRRREQGYDALEKALIASAAGDGEAA--VRQAARADALLD 115

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
              L  LL  + A +      A    E +L    TR  A   L   S   GD  +   +A
Sbjct: 116 RPALSRLLAARAAESAGNLEGAQVHYEALLNDQKTRVVARRGLAQLSNERGDFAATIDHA 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARS 233
             A   +  A W  +A+    V    W  A+T L + ++  +       R R++LL A +
Sbjct: 176 GDAFQQAKGARWAFDALFDAQVAKARWRDALTTLTEGERRKQVAPDTARRRRSVLLTAAA 235

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +E A+  D   +   A+ + +       A+  AA+ L    + ++A  +LE  W   PHP
Sbjct: 236 VE-AEGTDSENARELAVSAHRAAPGFAPAAALAARLLADGRRHKRASEVLESAWAAAPHP 294

Query: 294 EIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +A  +  L   +T  K L+R   L  +N +  ES +++ +IALE G  D   A+A+L  
Sbjct: 295 ALARAFQDLRKSDTKAKRLERLKTLAALNPDHRESHLVLIQIALEEG--DAPAARALLDP 352

Query: 353 ---KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW--ISDDGYLSSVWLP 407
                 P   +  L A++ + +  + +    W   A HA  D  W  I  +G L      
Sbjct: 353 MMDGTPPSSRLCALAARLARLDGKD-ELARRWMTRASHAGADADWSDIDPEGRL----FA 407

Query: 408 LSPIS-KTLCY-FEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
            +P   K + Y F  +     P Y   E    ++         ++ L +  +    +  +
Sbjct: 408 YTPDDWKRMVYVFGDENRLTHPRYERFERAAGAVP--------ETALLDAPRPVRSASSR 459

Query: 466 VSSFEDSTIHPLDPHIRQPDDPGIKEQ 492
            +SF ++T        R PDDPG+ E+
Sbjct: 460 TTSFAEATP-------RMPDDPGVPEE 479


>gi|163797972|ref|ZP_02191914.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium
           BAL199]
 gi|159176766|gb|EDP61337.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium
           BAL199]
          Length = 456

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 179/448 (39%), Gaps = 23/448 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWI--L 57
           M R   Y   +++++   I +   P D+ I W G RL    PF +  ++   +  W+  +
Sbjct: 1   MRRSFLYIIRLAILVALAIWLVRNPGDIRIDWIGWRL--EMPFALFMVITVAV-TWVAGI 57

Query: 58  LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
              ++   L  P  +      +  + G++AL  GL +IAA +   AR+      +     
Sbjct: 58  GLRMAAGALGAPWAVMRRRADQRRESGFRALTLGLAAIAAGDAEEARRQAREADR--LLR 115

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +  L  LL  Q A        A      +     T    +  L  ++   GD   +   A
Sbjct: 116 DPSLTRLLSAQAAALNGDTAAAARYFAALRDNEDTAFLGIVGLLRQALARGDEARSLELA 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARS 233
            +A  + PDAP V    +     A+ W  A   L    K      ++  R+R+ LL  R+
Sbjct: 176 EEAYAMRPDAPLVATTRLYGRARARRWFDAQVALYDAVKRRIVPEEDGRRHRSALLTERA 235

Query: 234 LEN--ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            E   ADK D    +  A ++ +     + A    A+ L    K ++ + ++E+ W  +P
Sbjct: 236 REALAADKLDEALEF--AGKARESVPGFVPAVALEAELLGRTGKAKRGQRLIEEAWPKSP 293

Query: 292 HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKA 348
           HP +   Y  L++E N + + KR   L +   +  ES + +++ AL  E+    +   +A
Sbjct: 294 HPALTEAYRGLVTETNLIDRFKRLHALADHAVDHPESRMTIAEAALDAELWGEARVQLEA 353

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
           +    +  R     L A++E A   +      W + +  A  DP W     G ++  W  
Sbjct: 354 LTGSDLTARA--CRLRARLEDAEHGDDRAARLWLERSGSAPADPAWTCGSCGAVAPDWSA 411

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENI 435
           +           W +P +    +SS+++
Sbjct: 412 VCGHCGEFDTVAWTLPPRV-SVLSSDDV 438


>gi|254292446|ref|YP_003058469.1| HemY domain protein [Hirschia baltica ATCC 49814]
 gi|254040977|gb|ACT57772.1| HemY domain protein [Hirschia baltica ATCC 49814]
          Length = 495

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV--ILSILYFFLFA--WIL 57
           +R++    V+ L I +     + P+DVSI +    Y  S +   IL I+   L A  W +
Sbjct: 1   MRIVILLAVVILTIAAVTYAFNAPDDVSIAFNGAEYGMSRYTAGILVIVTGALVAVGWYV 60

Query: 58  LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQQ 113
           L  +    L  P  L     +  + K   AL  GL++    +    +  ARK  +     
Sbjct: 61  LSTI----LRIPFALNRSAKRARFGKARNALADGLIAAEGGDSIDALKKARKSTNLAKSD 116

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
            +  +  L YLL  + A A   ++ A      + +        +  L   + + GDL  A
Sbjct: 117 AS--DRKLSYLLAARAAEANGDWSDAEHAYSDLSREKGAELVGLRGLAAAAIQRGDLRGA 174

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL--NQKKK--NAKEWNRNRAILL 229
           + +  KAL +  +A W    + +    A +W  A   L   +K+K  + +   R RA+L 
Sbjct: 175 ETHTRKALSLKSNASWPFSTLFELQTKAADWESANETLTIGEKRKSIDLEVARRRRAVLH 234

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            A++     K    A    A ++ ++  +   A+  AA   ++  K  KA+  +E  W++
Sbjct: 235 TAQASRIRQKAPEKAERL-AADAARMAPSFPPAAYIAASLQLAAGKASKAQASIEGAWRI 293

Query: 290 NPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP +A ++  L  +E T  + KR   L  IN    ES +++ + A+  G  D+A    
Sbjct: 294 RPHPALALLWRDLKTNEPTSARAKRLNALAHINPSHRESRILLVEAAMIQGQWDEAEETL 353

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW--ISDDG 399
              ++      +  L+  I      + ++   W++ A  A  +  W  I  DG
Sbjct: 354 SHVLREGETTRLCTLMEAI-VGGRGDVEQASRWSRLASSAAREADWSDIDPDG 405


>gi|294679027|ref|YP_003579642.1| HemY domain-containing protein [Rhodobacter capsulatus SB 1003]
 gi|294477847|gb|ADE87235.1| HemY domain protein [Rhodobacter capsulatus SB 1003]
          Length = 480

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 158/390 (40%), Gaps = 10/390 (2%)

Query: 42  FVILSILYFFLFAWIL--LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99
            + L+IL  +L   +L  +FA  RF       +     +    KGY+AL  G++++A+  
Sbjct: 51  LIGLAILTIWLALKVLGFVFAFIRFVTGDETAISRYFDRNRERKGYEALAEGMLAVASGE 110

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             LA    S    +       L  LL  Q A+       A E    +L    TR   V  
Sbjct: 111 SKLAASKASKA--ERYLRRPELTNLLTAQAAMMNGDTRKAEEVYRKLLADQRTRFVGVQG 168

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA- 218
           L  +    GD ++A + A KA  ++P    V   + +      +W  A   L  K +   
Sbjct: 169 LLSQKLAEGDTDTAVKLAQKAFALNPKNLEVQNTLFKLQTEVGDWKGARDVLLAKMRQGQ 228

Query: 219 --KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             K+ ++ R A+L +  +    D G  I +   AI + K   + I A+  AAK+   +  
Sbjct: 229 LPKDVHKRRDAVLALQEAKAVLDGGTSIEAQEAAIAAAKASPDLIPAAAMAAKAHYDKGD 288

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKI 334
            + A  +L K W+  PHP++A ++  ++  E+   +LKR  +L  +  +  E+ ++ +++
Sbjct: 289 AKSATRVLLKAWEAQPHPDLAAVFASMVPGESATERLKRFEKLLSLRPDHEETRLLRAEL 348

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
            +       A       ++  P   +  L+A IE+    +   +  W   AL A     W
Sbjct: 349 CIAAEDFPAARRALGNLVEANPTSRVLTLMAAIERGEGEDDAVVRGWLAKALTAPRGKQW 408

Query: 395 ISDDGY-LSSVWLPLSPISKTLCYFEWKIP 423
             D    + S W P+           W+ P
Sbjct: 409 CCDKCQNIQSQWGPVCDNCGGFDTLSWREP 438


>gi|83945092|ref|ZP_00957458.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851874|gb|EAP89729.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 487

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 173/420 (41%), Gaps = 39/420 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIV--SHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL 58
           M+RL     VI+ V+ + + V  +  P  V++ +  +  + +PF  L++    L A++L+
Sbjct: 1   MIRLT--LTVIACVLTAMLAVFLTLNPGLVTVEFLGQTTQ-APFA-LAMGALILAAFVLV 56

Query: 59  FA--VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
            A  V     S P        +R  D+G+ AL   L++ AA    LA  +      +   
Sbjct: 57  VAWWVIAKLWSAPEAWKRFSLRRRRDQGFDALERALIASAAGQGDLA--VRQAARAEALL 114

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L  LL  + A A      A    E ML    TR  A   L   +    D      +
Sbjct: 115 DRPALSRLLAARAAEAAGDLESAQIHYEAMLADAKTRLVAQRGLVGIAQSRSDSQGLLTH 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLI-- 230
           A  A + +  A W  +A+ +  V    W++A   L + ++          R RA+LL   
Sbjct: 175 AADAFEQAGRARWAFDALFEAQVNVALWAKAEATLTEGERRGHVDRLVAARMRAVLLTAE 234

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-------AAKSLISQNKKRKAEVIL 283
           AR LE+AD             + +L D +  +S         A + L  Q + R+A  IL
Sbjct: 235 ARRLESADP----------ETAARLADRAATSSPGFAPAAELAGRLLAEQRRHRRAVDIL 284

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGS 340
           E  WK  PHP +A  + +L   +T  K KRA RL     +N +  ES +++ + AL+ G+
Sbjct: 285 EDAWKHAPHPALARAFANLRRSDT--KAKRAERLRGLAALNPDHRESRLLLVETALDQGN 342

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-DDG 399
            + AH+     ++ +P       LA        N +    W   A HA  +  W   D+G
Sbjct: 343 REAAHSALKPVLETSPVSARACALAARLARLEENPEDAQRWMARASHAPAEADWSDIDEG 402


>gi|83313522|ref|YP_423786.1| hypothetical protein amb4423 [Magnetospirillum magneticum AMB-1]
 gi|82948363|dbj|BAE53227.1| Uncharacterized enzyme of heme biosynthesis [Magnetospirillum
           magneticum AMB-1]
          Length = 426

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/429 (21%), Positives = 173/429 (40%), Gaps = 13/429 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWILLF 59
           M R + +  +  L +   + ++  P +V+I W G RL  T P ++  +    +   +L  
Sbjct: 1   MRRFLVFVVLTGLAVAGAVWLADRPGEVTIRWQGWRLDTTVPVLLAVLALLLVGLSLLAR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V R     P             KGY AL  GL + A+ +   A K+     +     + 
Sbjct: 61  LV-RAVFGAPGRWLQSRRLGRQRKGYMALSDGLAAAASGDAARAAKLSRKADK--LLKDP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            +  LL  Q A      +   ++   M     T       L   + + GD   A+  A +
Sbjct: 118 AVTALLTTQAAQLGGDADQLRDRFRAMTGRKETAFLGHKGLAELALKSGDRAIARDEAAR 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235
           A ++ P A  +   ++  +V A  W+ A   L   +++      ++ R  A++L+ R+ E
Sbjct: 178 AFELQPMAADLAVQLLDLHVEAGAWAEAEQVLRLARRHGAVSEADFPRRHALILLGRAEE 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNPHPE 294
               GD   +  D  +  +  D     +I  A  L+ +  K RKA  +L+  +K +PHP 
Sbjct: 238 ALRAGDESLAL-DWAQDARDADPLFTPAITLAADLLRRRGKGRKAASLLKAAFKAHPHPL 296

Query: 295 IANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +   +  L   E+ + ++K    L + N  + E  + +++ AL+      A      A +
Sbjct: 297 LITEWRKLGDGESALDRVKSLQELAQANPGAPEGHMALAEAALDAQLWGLARTHLAKAQE 356

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWT-QSALHAMPDPLWISDD-GYLSSVWLPLSPI 411
             P + +F LLA++E+    +      WT ++A  ++P+  W     G+ +  +    P 
Sbjct: 357 QRPTRAVFALLARVERDERKDEAAANAWTLKAATDSVPESSWTCGGCGHQTPDFALSCPA 416

Query: 412 SKTLCYFEW 420
                  EW
Sbjct: 417 CGAAGRLEW 425


>gi|114798425|ref|YP_761904.1| HemY domain-containing protein [Hyphomonas neptunium ATCC 15444]
 gi|114738599|gb|ABI76724.1| HemY domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 478

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 18/258 (6%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           LARK     S +H   +E L  LLE + A A   +  A     ++ ++P  +   +    
Sbjct: 109 LARK-----SMRHA-EDERLKLLLEARAAEANDDWAGAERAWGLLTRLPGGQLAGLRGSA 162

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-- 219
             +   GD  +A+  A +AL++  DA W   ++    V   +W +A+  L   +K     
Sbjct: 163 TAASERGDPLTAETRAREALELRSDADWPFNSLFDIQVAKGDWDKALDTLAMGEKRGLVE 222

Query: 220 --EWNRNRAILLIARS--LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                R RA+L  AR+  L  A+K     S  DAI S     +   A+   A+ L+   K
Sbjct: 223 GINLKRRRAVLFTARAVNLPIAEKPAAQKSLADAIRS---APDFPPAAYHGARFLMVDGK 279

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR-LEEINKESVESLVIVSKI 334
            + A+ +LE  WK  PHP +A +   L+ ++T   +   L+ L + +    ES ++ ++ 
Sbjct: 280 AKAAQGVLELGWKARPHPALAQLSRRLVPQDTRENIAARLKALVDAHPSHRESRILAAE- 338

Query: 335 ALEMGSIDQAHAKAMLAM 352
            L M S D   A   LA+
Sbjct: 339 -LSMDSADWVEAIKTLAL 355


>gi|114329085|ref|YP_746242.1| hypothetical protein GbCGDNIH1_2421 [Granulibacter bethesdensis
           CGDNIH1]
 gi|114317259|gb|ABI63319.1| hypothetical secreted protein [Granulibacter bethesdensis CGDNIH1]
          Length = 434

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 95/439 (21%), Positives = 177/439 (40%), Gaps = 22/439 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLY--RTSPFVILSILYFFLFAWILL 58
           M R+I+     ++V+ +   V+  P  V +T G+ L    + P  I++++   L   +LL
Sbjct: 1   MRRIIKIVLPAAVVVAAAWYVAGLPGHVGMTVGDDLTIDMSVPAAIVAVVILVLAVHLLL 60

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118
            AV    L  P  +      R    G  A+   L+S+AA +   A +       +    +
Sbjct: 61  RAVG-AILGLPRTIRRWRQARTRQAGDYAVSRALVSLAAGDAGGAWREAGKA--RACLGD 117

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
                LL  + A    + + A +    + +           L  E+    D  SA   A 
Sbjct: 118 TAQTLLLMAEAARLSGRESEATQAFHALTRTEDASFLGYRGLLREAITREDWTSAAELAR 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           KA    P A W+    V   +    W  A++     ++ A       A       L+ A+
Sbjct: 178 KAELAHPGAAWLRTERVNLAIRGGRWMDALSLAENDQQRAAF-----ATAAAQAELDQAE 232

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           K         A ++ +L  +   A+I  A +L +  ++R+++ +L K W  +P P++A +
Sbjct: 233 K------LRTARQAFRLDPSLTSAAIAYATTLRAAGRQRRSDAVLVKAWAAHPQPDLAVV 286

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
               ++ + + +++   RL   N    ES +++++  L  G   +A + A  A ++  +K
Sbjct: 287 ALSGVT-DPLTRVRTVKRLVAGNPGHPESHLLLARENLAAGLTGEARSHAEQASRLIDQK 345

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-DDGYLSSVWLPLSPISKTLCY 417
            ++LLLA IE+        +    + A  A PDP W     G+ ++ W    P   T   
Sbjct: 346 RVWLLLADIEEKEHGPGAAMQAALRRASEASPDPGWRCLHCGHATTHWAAACPACHTPGQ 405

Query: 418 FEWKIPTKS----PEYISS 432
             W  P  +    P  +SS
Sbjct: 406 IRWTTPGDAGVALPPVLSS 424


>gi|23004378|ref|ZP_00047740.1| hypothetical protein Magn03000405 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 250

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 6/235 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        +++A
Sbjct: 1   MWRALVFLALLAIAAYGAVWIADHPGSVTVVWNGYEIGMSLAIALTGVLVAAIIIGIIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  PA +     +R  +KG  +L  G++++ + + PLA + H+    +    ++ 
Sbjct: 61  IMSGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A        A +  + M   P TR   +  L+ E+ R  D  +A+ YAT+A
Sbjct: 119 LTLLLKAQAAQISGDREAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYATEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIA 231
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRASLGLMDKSVARRQRAVLLTA 233


>gi|58616804|ref|YP_196003.1| hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416416|emb|CAI27529.1| Hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str.
           Gardel]
          Length = 413

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/366 (21%), Positives = 158/366 (43%), Gaps = 34/366 (9%)

Query: 41  PFVILSILYFFLFAWI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99
              I+++++ F+   I L+F V + F  C         KR  DK    L  G M +   N
Sbjct: 42  ALCIIAVIFLFVILLIRLVFYVCQCFYGCK--------KRRQDKRIILLDQGYMHLNCGN 93

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK-LEMMLQIPATREFAVY 158
           I  A K    +++ H F +  L +LL+ +      +Y +A +  ++    +P        
Sbjct: 94  IEKADKC---ITKLHDFDHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGI 149

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKK 216
            +     +I D +       K L+I     W     ++   ++++W+ AI  +++  K K
Sbjct: 150 HILNHIKQIEDQSKQLSLFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLK 209

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-------SIMASICAAKS 269
               ++    + ++  +L          +Y    + L + DN         + ++  A+ 
Sbjct: 210 INVPYDTQETLCILYYAL-----AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQL 264

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            I+ NKKRKA  +LE  ++++PHP+IA++Y  ++  ++    +   RL  IN +   S+ 
Sbjct: 265 YINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHHDS----QAIHRLYNINSDYYFSIY 320

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHA 388
           ++ + AL +G  D A        K      ++ L+ +++      T+ +LYWT  A   A
Sbjct: 321 LIVQDALNLGEYDLAMKHLNNVFKSRTYLSLYFLMLKLKVLVQDYTE-LLYWTDKASKDA 379

Query: 389 MPDPLW 394
           + D  W
Sbjct: 380 ITDQHW 385


>gi|57238815|ref|YP_179951.1| hypothetical protein Erum0840 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578744|ref|YP_196956.1| hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57160894|emb|CAH57799.1| putative integral membrane protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417370|emb|CAI26574.1| Hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 413

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 158/366 (43%), Gaps = 34/366 (9%)

Query: 41  PFVILSILYFFLFAWI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99
              I+++++ F+   I L+F V + F  C         KR  DK    L  G M +   N
Sbjct: 42  ALCIIAVIFLFVILLIRLVFYVCQCFYGCK--------KRRQDKRIILLDQGYMHLNCGN 93

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK-LEMMLQIPATREFAVY 158
           I  A K    +++ H F +  L +LL+ +      +Y +A +  ++    +P        
Sbjct: 94  IEKADKC---ITKLHDFDHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGI 149

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKK 216
            +     +I D +       K L+I     W     ++   ++++W+ AI  +++  K K
Sbjct: 150 HILNHIKQIEDQSKQLSLFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLK 209

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-------SIMASICAAKS 269
               ++    + ++  +L          +Y    + L + DN         + ++  A+ 
Sbjct: 210 INVPYDTQETLCILYYAL-----AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQL 264

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            I+ NKKRKA  +LE  ++++PHP+IA++Y  ++  ++    +   +L  IN +   S+ 
Sbjct: 265 YINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHHDS----QAIHKLYNINSDYYFSIY 320

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHA 388
           ++ + AL +G  D A        K      ++ L+ +++      T+ +LYWT  A   A
Sbjct: 321 LIVQDALNLGEYDVAMKHLNNVFKSRTYLSLYFLMLKLKVLVQDYTE-LLYWTDKASKDA 379

Query: 389 MPDPLW 394
           + D  W
Sbjct: 380 ITDQHW 385


>gi|16124330|ref|NP_418894.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15]
 gi|221233012|ref|YP_002515448.1| HemY domain membrane protein [Caulobacter crescentus NA1000]
 gi|13421172|gb|AAK22062.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15]
 gi|220962184|gb|ACL93540.1| HemY domain membrane protein [Caulobacter crescentus NA1000]
          Length = 511

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 134/317 (42%), Gaps = 10/317 (3%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL  G +++AA +   AR++ +  S +       LV +L  Q A A      A      
Sbjct: 86  EALSRGFLAVAAGDGSEARRL-AQKSSELAEDAPALVRVLAAQAAEAAGDRGAAKSAYNA 144

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           ML  P  R   +  L   +   GD  +A R+A  A  ++  A W   A+++  + A +W+
Sbjct: 145 MLGFPEMRLAGLRCLMLAAQAEGDRQTAIRHAETAYGLARTARWAWRALLEARLEAGDWA 204

Query: 206 RAITFLNQKKKN------AKEWNRNRAILLIARSLENADKGDMIASYHD-AIESLKLCDN 258
            A+  +    +         E +R   +   A SL NAD     A   D A +S+KL  +
Sbjct: 205 AALQLVQGALERKIVSPVVAERSRAALLAASAASLVNADDPKTRAQALDFATQSVKLKPD 264

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRL 317
                + AA+ L    K  KA  ++E  WK  PHP +   Y  L  +E    + +R   L
Sbjct: 265 FAPGVVMAARLLAEDGKTAKAGGLIETAWKAEPHPALWLAYRDLKTNETPKARAQRLAAL 324

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
             +  E+ ES ++  + AL  G    A A A L    AP      L+A++  AN  + D+
Sbjct: 325 AAMKPEARESRLLRVESALIGGDPVAARAAARLLDDEAPTARFAGLMARVAAANG-DADE 383

Query: 378 ILYWTQSALHAMPDPLW 394
              W    + A  +P W
Sbjct: 384 ARAWIARGVAAPQEPDW 400


>gi|295687520|ref|YP_003591213.1| HemY domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295429423|gb|ADG08595.1| HemY domain protein [Caulobacter segnis ATCC 21756]
          Length = 511

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 10/317 (3%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL  G +++AA +   AR++ +  S +       LV +L  Q A A      A      
Sbjct: 86  EALTRGFLAVAAGDGSEARRL-AQKSAELAEDAPGLVRVLAAQAAEAAGDRGAAASAYNA 144

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           ML  P  R   +  L   +   GD  +A R+A  A  ++  A W   A+++  + A +W+
Sbjct: 145 MLGFPEMRLAGLRGLMQAALADGDKITALRHAETAYGLARTARWAWRALLEARLEAGDWA 204

Query: 206 RAITF----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD---AIESLKLCDN 258
            A+      L +K  +     R+RA LL A +    +  D  A       A +S+KL  +
Sbjct: 205 AALQLVQGALERKIVSPAVAERSRAALLAASAASLEESPDPKARAQALDFANQSVKLKPD 264

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRL 317
                I AA+ L  + K  KA  ++E  WK  PHP +   Y  L  +E    + +R   L
Sbjct: 265 FAPGVIMAARLLADEGKTAKAGQLIETAWKAQPHPALWLAYRDLKTNETPKARAQRLAAL 324

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
             +  E  ESL++  + AL  G    A A A L    AP      L+A++  AN    D+
Sbjct: 325 AAMRPEVRESLILRVEAALVGGDPIAARAAARLLDDEAPTARFAGLMARVAAANGQ-ADE 383

Query: 378 ILYWTQSALHAMPDPLW 394
              W    + A  +P W
Sbjct: 384 ARAWIARGIDAPREPDW 400


>gi|68171287|ref|ZP_00544688.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658307|ref|YP_506957.1| HemY domain-containing protein [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67999302|gb|EAM85950.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599764|gb|ABD45233.1| HemY domain protein [Ehrlichia chaffeensis str. Arkansas]
          Length = 416

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 11/158 (6%)

Query: 243 IASYHDAI---ESLKLCDN--SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           I  Y D +   +++K C    S   ++  AK  I  +KKRKA  ILE  +++NPHP+IAN
Sbjct: 236 IQKYDDGLRVLDNIKNCSQQCSTAVTLLKAKFYIDTDKKRKAVNILEHEYRINPHPDIAN 295

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y  ++  ++        +L   N     S+ ++++ A+  G  D A      + K    
Sbjct: 296 FYLDIMQHSS----HAIHKLYSFNTGYYFSIYLIAQDAINSGEYDTAMKYLNHSFKTKTY 351

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLW 394
             ++ L+ ++ +  S N +++LYWT   A  A+ D  W
Sbjct: 352 ISLYFLVLKL-KVLSQNYNELLYWTDKIAKDAIADKYW 388


>gi|73666713|ref|YP_302729.1| hypothetical protein Ecaj_0080 [Ehrlichia canis str. Jake]
 gi|72393854|gb|AAZ68131.1| putative Uncharacterized membrane-bound protein [Ehrlichia canis
           str. Jake]
          Length = 413

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 14/223 (6%)

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLEN 236
           K L+I     W     ++ Y L+++WS AI  + +  K K    +N    + +   +L  
Sbjct: 170 KMLEIFYKQSWSAIFKLEIYRLSRDWSNAIEEIKKVIKLKVNLPYNVQDMLNIFYYAL-- 227

Query: 237 ADKGDMIASYHDAI---ESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           A +   +  Y D +   +++K C   S    +  A+  ++ ++KRKA  ILE  ++ NPH
Sbjct: 228 AKQCYDVQRYDDGLKVLDNIKNCQKYSTPIVLLKAQCYLNTDRKRKAVSILEYEYRTNPH 287

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           P+IAN+Y  ++  N+    K    L   N E   S+ ++++ A+ +G  D A        
Sbjct: 288 PDIANLYLDIMQHNSHAIHK----LYSFNTEYYFSIYLIARDAINLGEYDAAMKYLNNEF 343

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLW 394
           K      ++ L+ ++ +  S + +++LYWT   A  A+ +  W
Sbjct: 344 KTQTYISLYFLMLKL-KVLSQDYNELLYWTDKIAKDAISEQHW 385


>gi|329848281|ref|ZP_08263309.1| hemY protein [Asticcacaulis biprosthecum C19]
 gi|328843344|gb|EGF92913.1| hemY protein [Asticcacaulis biprosthecum C19]
          Length = 515

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 128/309 (41%), Gaps = 23/309 (7%)

Query: 25  PEDVSITWGNRLYR-----TSPFVILSILYFFLFA-WILLFAVSRFFLSCPAMLFHMLHK 78
           P   S++W N  YR     T+  +I+ ++ F   A W L   ++R     P         
Sbjct: 25  PGLASLSWMN--YRIDIPATAAVIIIGVMAFCAVAFWNLALWLAR----SPQRAERARAD 78

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           +   +G  AL  G M++A  +   AR+ H+ V       N  LV +L    A        
Sbjct: 79  QRRRQGDDALTRGFMAVAVGDGSEARR-HA-VKALDLSDNTVLVRILGAMAAEESGDAVA 136

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
                  M+ +P  +   +  L   + R GD   A + A +A +    + W  E +    
Sbjct: 137 TRTAYSAMVSVPELKLAGLRGLMQLAARQGDKAEAVKLAGEAYNQPRPSMWAFETLFAAR 196

Query: 199 VLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARS--LENADKGDMIASYHD-AIE 251
           + A EW+ A+      L +K  +     R +A L+ A +  LE +D   M     D A  
Sbjct: 197 LEAGEWAEALDLIEGALTRKLISPIFSERAKASLMAASAARLETSDDAQMRDQALDYAQR 256

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           + KL      A+I AA+ L   NK  +AE +LE  W   PHP +   Y  L+S+ T    
Sbjct: 257 AAKLQPQFTPAAIIAARLLAKANKPGRAEDVLEAAWASRPHPAVWLAYRDLVSDET--PK 314

Query: 312 KRALRLEEI 320
           +RA RL+ +
Sbjct: 315 ERARRLQGL 323


>gi|58584738|ref|YP_198311.1| membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58419054|gb|AAW71069.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
          Length = 387

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           A+  I   K RKA  +LE  + VNP P+ A IY  L SE        A RL  +  +   
Sbjct: 239 AELYIRLGKIRKASAVLEAEYTVNPTPQSAKIYISLNSEG-------AERLYNLRPDYYF 291

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385
           S  +++  ++  G  D A      A+K A    I+L++ Q++       D+ +YW ++  
Sbjct: 292 SYCLLASSSISSGKYDLASQYLNTAIKKANYMSIYLIMVQLKVV-LQEQDQTIYWLSKMG 350

Query: 386 LHAMPDPLW 394
             A+PDP W
Sbjct: 351 SEALPDPCW 359


>gi|42521029|ref|NP_966944.1| hypothetical protein WD1232 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410770|gb|AAS14878.1| hypothetical protein WD_1232 [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 233

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           A+  I   K RKA  +LE  + VNP P+ A +Y +L S       K A RL  +  +   
Sbjct: 84  AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDCYF 136

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385
           S  +++  ++  G  D A      AMK A    I+ ++ Q+ +      DK++YW  +  
Sbjct: 137 SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 195

Query: 386 LHAMPDPLW 394
             A+PDP W
Sbjct: 196 SEALPDPGW 204


>gi|99034641|ref|ZP_01314590.1| hypothetical protein Wendoof_01000593 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 155

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           A+  I   K RKA  +LE  + VNP P+ A +Y +L S       K A RL  +  +   
Sbjct: 6   AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDYYF 58

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385
           S  +++  ++  G  D A      AMK A    I+ ++ Q+ +      DK++YW  +  
Sbjct: 59  SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 117

Query: 386 LHAMPDPLW 394
             A+PDP W
Sbjct: 118 SEALPDPGW 126


>gi|225677319|ref|ZP_03788296.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
 gi|225590646|gb|EEH11896.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
          Length = 406

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           A+  I   K RKA  +LE  + VNP P+ A +Y +L S       K A RL  +  +   
Sbjct: 257 AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDYYF 309

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385
           S  +++  ++  G  D A      AMK A    I+ ++ Q+ +      DK++YW  +  
Sbjct: 310 SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 368

Query: 386 LHAMPDPLW 394
             A+PDP W
Sbjct: 369 SEALPDPGW 377


>gi|58698408|ref|ZP_00373319.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630891|ref|YP_002727682.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp.
           wRi]
 gi|58535063|gb|EAL59151.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592872|gb|ACN95891.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp.
           wRi]
          Length = 406

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           A+  I   K RKA  +LE  + VNP P+ A +Y +L S       K A RL  +  +   
Sbjct: 257 AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDYYF 309

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385
           S  +++  ++  G  D A      AMK A    I+ ++ Q+ +      DK++YW  +  
Sbjct: 310 SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 368

Query: 386 LHAMPDPLW 394
             A+PDP W
Sbjct: 369 SEALPDPGW 377


>gi|83310058|ref|YP_420322.1| hypothetical protein amb0959 [Magnetospirillum magneticum AMB-1]
 gi|82944899|dbj|BAE49763.1| Uncharacterized membrane-bound protein [Magnetospirillum magneticum
           AMB-1]
          Length = 469

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 5/209 (2%)

Query: 223 RNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R RA++L  ++ L++ D  D   S   A E+L      + A++   +  +S+ ++ +AE 
Sbjct: 228 RWRAVVLEGQACLDSQD--DPARSLRLAREALAADPGFLPAALHVLRQEVSEGRRSEAEA 285

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +L  +W+  P   +    + L  E+    +LKR   L E      E  +   + A+    
Sbjct: 286 VLAAVWRSAPARILLETCSPLWREDDAESRLKRLEVLAEWAPHDPEGHLAAGEAAVAAAK 345

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-G 399
              A    M A+KIAP      L+A+IE       ++   W +    A   P W+ +  G
Sbjct: 346 WGVARRHLMAALKIAPDALGCRLMAEIEDKEPGGAERAEIWRRREREAPAAPTWVCEACG 405

Query: 400 YLSSVWLPLSPISKTLCYFEWKIPTKSPE 428
             S  W P           +W  P   PE
Sbjct: 406 ATSGSWAPYCSACAAGAAIQWTRPAHKPE 434


>gi|111073632|emb|CAL29494.1| hypothetical protein OW2-H [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 420

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 21/213 (9%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWN--------RNRAILLIARSLENADKGDMIASY 246
           ++ Y+L ++W  AI     K K A ++N        +  A+   A + +  +KG+   + 
Sbjct: 195 IEGYILHEDWINAIL----KLKEAIKFNIFLPFDCEKMLAVFYCASAKQYENKGNYKKAL 250

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               ++   C      +   A+  I   K RKA V+LE+ + VNP P+ A IY  L S  
Sbjct: 251 RSLFKAQSYCAAFQPINYLRAELYIKLGKIRKASVVLEEEYTVNPTPQSAKIYISLNS-- 308

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
                K A +L  +  +   S  +++  ++ +   D A     +AM+ A    I+L++ Q
Sbjct: 309 -----KGAEKLYNLRSDYYFSYCLLALSSISLSKYDLASQHLDIAMRKANYVSIYLIMIQ 363

Query: 367 IEQANSHNTDKILYW-TQSALHAMPDPLWISDD 398
           ++ A     ++++YW  +    A+ DP W   D
Sbjct: 364 LKVA-LQEYEQVIYWLNKMDSEAISDPYWKCAD 395


>gi|315497774|ref|YP_004086578.1| hemy domain protein [Asticcacaulis excentricus CB 48]
 gi|315415786|gb|ADU12427.1| HemY domain protein [Asticcacaulis excentricus CB 48]
          Length = 515

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 84/383 (21%), Positives = 142/383 (37%), Gaps = 17/383 (4%)

Query: 25  PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84
           P   ++ W      T     + ++    FA +  + +  +    P             +G
Sbjct: 25  PGTATLIWLGYRIDTPAAAAVIVIGLLAFAAVCFWNLVLWMSRAPQRAERQRANARRRQG 84

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
            + L  G +++ + +   AR+        H   N  LV +L    A              
Sbjct: 85  EETLTRGFIAVVSGDGAEARRQAIKAVDLH--DNVALVRILNALAAETAHDPVATRAAWT 142

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            ML +P  +   +  L   +   GD   A R A +  +    A W  + + +    A EW
Sbjct: 143 AMLSVPELKLAGLRGLMALAISEGDRTEAIRLAAEGYNQPKPAMWAFKTLFEARSTAGEW 202

Query: 205 SRAITF----LNQKKKNA--KEWNRNRAILLIARSLENADKGDMIASYHD-AIESLKLCD 257
           + A+      LN+K  +    E  R   +   A  LE A +G +     D A+ + KL  
Sbjct: 203 AEALDLVEGALNRKLVSPLFAERARAALMAASAARLEGAAEGQIREQALDYAVRAAKLQP 262

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
                ++ AA+ L + NK  +AE +LE  +   PHP I   Y  L+++ T     RA RL
Sbjct: 263 MFAPGAVIAARLLAAHNKLGRAEDVLEAAYAAQPHPAIWLAYRDLVNDET--PKDRARRL 320

Query: 318 EEI---NKESVES-LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--N 371
           + +   N +  ES L+ V +  L     D   A A L  ++   +    L   + +A   
Sbjct: 321 QGLIDRNPQHRESRLLEVERSVLSGVRADIERATAALEDELTEERLTRRLCGLMAKAALA 380

Query: 372 SHNTDKILYWTQSALHAMPDPLW 394
             + D    W   A  A  +P W
Sbjct: 381 LQDVDGARGWVAKASLAKAEPDW 403


>gi|46202657|ref|ZP_00208607.1| hypothetical protein Magn03007324 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 471

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 74/193 (38%), Gaps = 9/193 (4%)

Query: 245 SYHDAIESLKLCDNSIMAS---ICAA----KSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           S  D   SL+L   ++ A    + AA    +  +S+ ++ +AE +L  +W+  P   +  
Sbjct: 244 SQDDPARSLRLAREALAADPGFLPAALHVLRQEVSEGRRSEAEAVLAAVWRSAPARILLE 303

Query: 298 IYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               L  E+    +LKR   L E      E  +   + A+       A    M A+KIAP
Sbjct: 304 TCAPLWREDDAESRLKRLEALAEWAPHDPEGHLAAGEAAVAAAKWGVARRHLMAALKIAP 363

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKTL 415
                 L+A+IE       ++   W +    A   P W+ +  G  S  W P        
Sbjct: 364 DALGCRLMAEIEDKEPGGAERAEIWRRREREAAAAPTWVCEACGATSGSWAPYCSACGAG 423

Query: 416 CYFEWKIPTKSPE 428
              +W  P   PE
Sbjct: 424 AAIQWTRPAHKPE 436


>gi|88607729|ref|YP_505844.1| hypothetical protein APH_1339 [Anaplasma phagocytophilum HZ]
 gi|88598792|gb|ABD44262.1| conserved domain protein [Anaplasma phagocytophilum HZ]
          Length = 412

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 78/404 (19%), Positives = 170/404 (42%), Gaps = 28/404 (6%)

Query: 4   LIRYF--FVISLVICSFIIVSHYPEDVSI-TWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +I YF  F++  + C F +  +    + +   G  +     FV+  +   FLF    +  
Sbjct: 1   MITYFLIFIVVSLACGFAVQGYEGLALKLEVLGYSVEANVVFVVFMLCVLFLF----IVL 56

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R   +C A+  + + + +  K Y  +      ++  ++   RK+   +S++    +  
Sbjct: 57  VGRACFAC-ALCMYRVRRGSVSKKYDEVGKSFAFLSVGHVDNVRKIVG-ISERFAKFDSP 114

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           ++ LLE   +    QY IA +   ++    LQ      + V  L  E  R    +   R 
Sbjct: 115 VLQLLEGCASFRIGQYEIAEKHFSLIPSKALQEVDLGAWLVGILANEKSR----DCKLRV 170

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSL 234
            ++  D+     W     ++   +  +W   +T L   +K   +  ++ N  + LIAR  
Sbjct: 171 LSRLYDVFHSRRWSVLFRLEIARMEGQWDEVLTALKLIEKYGVSHPYDLND-LELIARC- 228

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           + A+   M   + + +  +K   + + A++  AK     N  ++A   LE  ++V+PHP+
Sbjct: 229 KLAELHYMQGDFKEGLGVIK-GSSGLQATLWRAKFNAKLNNVKRAMEELEAYYRVDPHPD 287

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A++Y  ++ +  +   K    L  +N +S  S +++ +  +++   + A      A+  
Sbjct: 288 VASLYLSMVQDKNLAVEK----LNALNPDSYMSFLLMVRKYMDLKQYNAAEKHLKQALTQ 343

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISD 397
                ++ ++ +I      N D+I YW       ++PD  W  +
Sbjct: 344 YKYAGLYGMMLEI-MVRLGNLDEIEYWIDMMRRDSVPDMHWACE 386


>gi|197106863|ref|YP_002132240.1| hypothetical protein PHZ_c3402 [Phenylobacterium zucineum HLK1]
 gi|196480283|gb|ACG79811.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 504

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 15/260 (5%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G ++ A  +   AR++    +   +     LV +L  Q A A    + A      ML
Sbjct: 88  LSRGFLAAAGGDGSEARRLARKAADLAS-DAPGLVRVLAAQAAEAAGDLDEARAAYTAML 146

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
             P  R      L   +   G   +A R+A +A   +  A W   A+++  + A +W +A
Sbjct: 147 GFPEMRLAGHKGLMQLAAAQGARETALRHAQEAYGEARTARWAWRALLEAKLEAGDWPQA 206

Query: 208 ITFLNQKKKN------AKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNS 259
           +  +              E  R   +   A  LE+A   K   +A  H A+E+ KL    
Sbjct: 207 LDLMKGALDRKIVPPVVAERARAALLAASAAQLEHAPEPKARALAMDH-AVEAAKLAPGF 265

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
               + AA+ L    K  +A   +E  W+V PHP +   Y  L ++ T    +RA RL E
Sbjct: 266 APGVVMAARLLAQAGKVGRAAATVENAWRVAPHPALWLAYRDLRTDET--PRERAQRLSE 323

Query: 320 ---INKESVESLVIVSKIAL 336
              +N    ESL++  + AL
Sbjct: 324 LAAVNPTHRESLILHVERAL 343


>gi|56417190|ref|YP_154264.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries]
 gi|56388422|gb|AAV87009.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries]
          Length = 412

 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 23/229 (10%)

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA------KEWNRNRAIL 228
           R   +  D+   APW     ++   +  +W   +  +    K         E   + A L
Sbjct: 169 RVLRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACL 228

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKI 286
           ++ARS     +GD         E LKL   +  + A+I  AK+       +KA   LE  
Sbjct: 229 MLARSCYQ--RGDYK-------EGLKLVGRATDMHAAILKAKTHEKLGNPQKARDALEAC 279

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +K  PHPEI   Y  +  +          RL  +N +   S+++  K  +     + A  
Sbjct: 280 YKTTPHPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQ 335

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLW 394
            A  A+      E++ L+A +  A   N D+++YW T+    ++P+  W
Sbjct: 336 HAKRAIARYKYVELYCLMADV-MARIGNIDEVVYWITKMQKDSVPNMQW 383


>gi|254995360|ref|ZP_05277550.1| hypothetical protein AmarM_05429 [Anaplasma marginale str.
           Mississippi]
          Length = 411

 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 23/229 (10%)

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA------KEWNRNRAIL 228
           R   +  D+   APW     ++   +  +W   +  +    K         E   + A L
Sbjct: 168 RVLRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACL 227

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKI 286
           ++ARS     +GD         E LKL   +  + A+I  AK+       +KA   LE  
Sbjct: 228 MLARSCYQ--RGDYK-------EGLKLVGRATDMHAAILKAKTHEKLGNPQKARDALEAC 278

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +K  PHPEI   Y  +  +          RL  +N +   S+++  K  +     + A  
Sbjct: 279 YKTTPHPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQ 334

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLW 394
            A  A+      E++ L+A +  A   N D+++YW T+    ++P+  W
Sbjct: 335 HAKRAIARYKYVELYCLMADV-MARIGNIDEVVYWITKMQKDSVPNMQW 382


>gi|222475555|ref|YP_002563972.1| hypothetical protein AMF_890 [Anaplasma marginale str. Florida]
 gi|255004673|ref|ZP_05279474.1| hypothetical protein AmarV_05254 [Anaplasma marginale str.
           Virginia]
 gi|222419693|gb|ACM49716.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 412

 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 21/228 (9%)

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           R   +  D+   APW     ++   +  +W    T L + K  AK     R I+L  +  
Sbjct: 169 RVLRRLCDVFHRAPWAAMFRLEIARIEGDWD---TVLVEVKLAAK-----RGIVLPYKHE 220

Query: 235 ENADKGDMI---ASYH--DAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKIW 287
             AD   ++   + Y   D  E LKL   +  + A+I  AK+       +KA   LE  +
Sbjct: 221 RMADIACLMLARSCYQRGDYKEGLKLVGRATDMHAAILKAKTHEKLGNPQKARDALEACY 280

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           K  PHPEI   Y  +  +          RL  +N +   S+++  K  +     + A   
Sbjct: 281 KTTPHPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQH 336

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLW 394
           A  A+      E++ L+A +  A   N D+++YW T+    ++P+  W
Sbjct: 337 AKRAIARYKYVELYCLMADV-MARIGNIDEVVYWITKMQKDSVPNMQW 383


>gi|269958417|ref|YP_003328204.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel]
 gi|269848246|gb|ACZ48890.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel]
          Length = 412

 Score = 43.1 bits (100), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 26/257 (10%)

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI--TFLNQKKKNAKEWNRNR----AIL 228
           R   +  D+    PW T   V+   +  +W  A+  T L  ++     +   R    A L
Sbjct: 169 RVLRRLCDVFRRVPWATMFKVEIARIEGDWDTALVETRLAARRGVVLPYKHERMGDVACL 228

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKAEVILEKI 286
           ++AR+     +G+    Y    E LKL +    + A+I  A         RKA  +LE  
Sbjct: 229 MLARAC--CQRGN----YR---EGLKLVEKVTDMHATILKATIHEKLGNLRKARDVLEVC 279

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +K  PHPE+   Y   +S++    ++   RL  +N E   S+++  +  + +   + A  
Sbjct: 280 YKTAPHPEVVTAYLA-VSQDQDAAME---RLSSLNAEHYVSMLLAIRRYVSVKQYNAAEQ 335

Query: 347 KAMLAMKIAPRKEIFLLLAQIE-QANSHNTDKILYWTQSALH-AMPDPLW-ISDDGYLSS 403
            A  A+  A  K + L  A +E  A   N D++ YW +     ++P+  W  ++   +SS
Sbjct: 336 YAKRAL--AKYKYVELYCAMMEVMACIGNVDEVAYWLEKMRKDSLPNMQWRCTECCAVSS 393

Query: 404 VWLPLSPISKTLCYFEW 420
            W     +  T    +W
Sbjct: 394 GWSHECSVCSTFDSIQW 410


>gi|307718566|ref|YP_003874098.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM
           6192]
 gi|306532291|gb|ADN01825.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM
           6192]
          Length = 305

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 11/169 (6%)

Query: 233 SLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           SL NA  D+GD   +     ++L+   ++       A++ I   +  +AE +LE + + +
Sbjct: 34  SLGNAYYDEGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYDRAEALLEGLLERD 93

Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P        +A ++      +T     R  R  E++   V  L  ++++ +E G +D+A 
Sbjct: 94  PVNTMVLSTLAYLFICKGDPDTAEDFYR--RALELSPGDVTILYNLARLRMEEGDVDEAL 151

Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP-DP 392
           + A  A +I+P +KE+ LL A +   ++   ++ +   ++AL + P DP
Sbjct: 152 SYAGEAYEISPDKKEVLLLYAILRLESAPTDEEAVALGETALSSYPKDP 200


>gi|78033476|emb|CAJ30093.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1]
 gi|144901138|emb|CAM78002.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 449

 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 90/439 (20%), Positives = 162/439 (36%), Gaps = 19/439 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWILLF 59
           +LRLI     +S V+ + +  S     V + W G  +    P ++  IL  FL  +  L 
Sbjct: 2   LLRLIVLLIFMSPVVFATLWFSDNVGSVQVEWLGWHVDSNMPVLLAVILVVFLI-FSALS 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +S      P+ L      R  +KG  AL   L +  + ++   R+  +  ++    +N 
Sbjct: 61  RLSALVADLPSKLGKSRQARGLEKGMSALLAALDAAESGDVGEGRRFAAEAAR--LLNNP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L   L+  +     Q  +A  +LE        R FA             ++  Q    +
Sbjct: 119 GLAARLDRLLPRPPAQ-PVAPTRLEAA----KGRLFA-RKPGPPPPPTPVVDKIQPVVVE 172

Query: 180 ALDISPDAPWVTE-AVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSL 234
            L  +P  P   +       + A EW  A  ++ +     +       R R++ L  ++L
Sbjct: 173 KLAAAPAGPSREDLEAFSAKIRAGEWGAAQAWIGEAVLAGRLTPLVAARWRSVALEGQAL 232

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           E A  GD       A E++      +  ++   ++ +S+ +K +AE +L  +W   P   
Sbjct: 233 E-ASPGDPARPLRLAREAMAADQTFLPPALHVIRAEVSEGRKAEAETLLASVWPHVPARV 291

Query: 295 IANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + +    L   E+    LKR   L  I     +  +   + A  +     A    M A+K
Sbjct: 292 LLDACAPLWRDEDQDACLKRLEALAAIAPHHPDGHLAAGEAAFAVQKWGVARRHIMAALK 351

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKIL-YWTQSALHAMPDPLWISDD-GYLSSVWLPLSPI 411
           IAP      L+A+IE+     + +    W +    A   P W+      +   W    P 
Sbjct: 352 IAPDALGCRLMAEIEEREPGGSARSAEIWRRREHEASLSPAWVCGACARVVEAWAACCPS 411

Query: 412 SKTLCYFEWKIPTKSPEYI 430
              +   EW    K+ E +
Sbjct: 412 CAGVATIEWTRSVKAEEAL 430


>gi|329765153|ref|ZP_08256735.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138356|gb|EGG42610.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 600

 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)

Query: 239 KGDMIASYHDAIES-------LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           KG ++ S  +  E+       L L   +I A     KSL+  N+   A  ILE I   N 
Sbjct: 142 KGKILLSKQNTSEAINQFYHVLDLEPENIEAKFYLGKSLVESNRIENAVKILESIVSNND 201

Query: 292 HPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           H E   +   +   + N+   L    +L E++  ++++ ++V KI +    I++A A   
Sbjct: 202 HLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSPNNIDAHLLVGKINMNAKIINEALAHFE 261

Query: 350 LAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL-- 406
             ++I+P   E  LLL QI + + +NTD+ L   +  L   P+ +    DG  S + L  
Sbjct: 262 KVLEISPNNIEAHLLLGQI-KMDLNNTDEALAHFEKVLEISPNHM----DGLNSKIILLE 316

Query: 407 PLSPISKTLCYFE 419
            L  + + + Y E
Sbjct: 317 KLGKVDEAIEYCE 329


>gi|167644094|ref|YP_001681757.1| HemY domain-containing protein [Caulobacter sp. K31]
 gi|167346524|gb|ABZ69259.1| HemY domain protein [Caulobacter sp. K31]
          Length = 515

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 10/320 (3%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +G +AL  G +++AA +   AR++    ++        L+ +L  Q A A   +  A + 
Sbjct: 83  QGVEALSRGFLAVAAGDGSEARRLAQKAAELAE-DAPALIRVLAAQAAEAAGDHTAARQA 141

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
              ML  P  R   +  L   +   GD   A ++A  A  ++  A W   A+++  + A 
Sbjct: 142 YNAMLGFPEMRLAGLRGLMQTALAEGDKGLALKHAETAYGLAKTARWAWRALLEARLEAG 201

Query: 203 EWSRAITFLNQKKKN------AKEWNRNRAILLIARSLENADKGDMIASYHD-AIESLKL 255
           +W  A+  +    +         E  R   +   A SLE +D    +A   D A+++ +L
Sbjct: 202 DWKAALDLVQGALERKIVPPLVAERARAALLAASAASLEESDDPKTLAQALDFAVQAARL 261

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRA 314
             +     + AA+   +  K  KA  ++E  WK++PHP +   Y  L  SE    +  R 
Sbjct: 262 KPDFAPGVVMAARLQAADGKAAKAGSLIEAAWKLSPHPALWLAYRDLKTSETPKLRAARL 321

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
             L  +  E+ ES ++  + AL  G    A A A L  +      +  L++++  AN   
Sbjct: 322 AALAGLKPEARESRLLKVESALIGGDPVAARAAARLLPEEGLTARVAGLMSRVAYANGE- 380

Query: 375 TDKILYWTQSALHAMPDPLW 394
            D+   W    + A  +P W
Sbjct: 381 ADEARAWIARGVAAAQEPDW 400


>gi|307566128|ref|ZP_07628586.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
 gi|307345316|gb|EFN90695.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
          Length = 396

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           + +E L  C N +M  +   +    + + R+   I++ IWK+ P P      T+ LS NT
Sbjct: 316 NNVEELSFCINDMMPLMSNTQCKYDKGQIRR---IVQDIWKLTPAPNTLTYTTYQLSYNT 372

Query: 308 ---VGKLKRALRLEEINKESVESL 328
                 ++R  R   I KE ++SL
Sbjct: 373 PQYYSPIRRTGRFYTITKEQLKSL 396


>gi|320451054|ref|YP_004203150.1| signAl transduction histidine kinase containing a receiver domain
           [Thermus scotoductus SA-01]
 gi|320151223|gb|ADW22601.1| signAl transduction histidine kinase containing a receiver domain
           [Thermus scotoductus SA-01]
          Length = 723

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 28/44 (63%)

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +A    AK+L+ Q ++ +A+V+L +  ++ PHPE+A +   +L 
Sbjct: 678 LARFTLAKALLEQGRREEAKVLLREELRLRPHPEVAELLNRVLG 721


>gi|78224662|ref|YP_386409.1| response regulator receiver modulated metal dependent
           phosphohydrolase [Geobacter metallireducens GS-15]
 gi|78195917|gb|ABB33684.1| response regulator receiver modulated metal dependent
           phosphohydrolase [Geobacter metallireducens GS-15]
          Length = 479

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 22/120 (18%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQ-------QYVLAKEWSRAITFLNQKKKNAKEWNR 223
             A RY TK        PW  E +VQ       QY L +E  R    +N++ +  KEWN 
Sbjct: 147 GGAYRYITK--------PWNDEELVQIIRDAVNQYRLVQENRRLTEIVNKQNEELKEWNE 198

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVI 282
           N  + ++ ++ E   K + +   ++ + S      +   ++ A   LI    KKR AE +
Sbjct: 199 NLKVRVLEQTTEIRKKHENLKELNERLRS------NFKDTVTAFSRLIELGGKKRHAETV 252


>gi|294085039|ref|YP_003551799.1| HemY domain-containing protein [Candidatus Puniceispirillum
          marinum IMCC1322]
 gi|292664614|gb|ADE39715.1| HemY domain protein [Candidatus Puniceispirillum marinum
          IMCC1322]
          Length = 445

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRL-YRTSPFVILSILYFFLFAWILL 58
          ++RL   F  I     S   ++  P  V + W G RL  RTS  V L I+  F    +  
Sbjct: 2  LIRLAVLFLFILAAAASASWLAAQPGHVQVEWLGWRLEMRTSLAVALVII--FALGMVFF 59

Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97
            + R   S P  L   + KR    G+KAL  GLM+++A
Sbjct: 60 DRLYRLIKSLPGWLGSSVQKRRDVAGHKALTLGLMAVSA 98


>gi|126314383|ref|XP_001376560.1| PREDICTED: similar to transient receptor potential M8 protein
           [Monodelphis domestica]
          Length = 1341

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 931 KIILCLFLIPLVGCGFVSFRKKPMDRHRRLIWSYLAFFTSPFVVFSWNVVFYIAFLLLFA 990


>gi|219121447|ref|XP_002185947.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582796|gb|ACI65417.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1133

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 18/181 (9%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNR 223
           G+   A+  + + L +   A    EAV ++Y  A+ W     RA+ F+   KK+  EW R
Sbjct: 303 GESTLARHTSRRGLGMKVLANAKKEAVEKEYQRAQTWKDYPIRALRFVGILKKDNAEWRR 362

Query: 224 NRAILLIARS------LENADKGDMIASY--HDAIESLKLCDNSIMASICAAKSLISQNK 275
             A   I R+        + D+GD ++ Y  +D     +   N+ M      KS++S   
Sbjct: 363 QLAATKIQRAWRAVLFQRHCDEGDDVSGYVSNDYAWKARSAGNNAMEKALKKKSILSHFN 422

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           +  +  IL     +    +++++     S NT   L+R    EE+   S    +   ++A
Sbjct: 423 QMNSRGILIASGGIQ---KVSDVTVVTESTNT---LRRGPSREELKVGSAMRELTGQRVA 476

Query: 336 L 336
           L
Sbjct: 477 L 477


>gi|332707120|ref|ZP_08427178.1| glycosyltransferase [Lyngbya majuscula 3L]
 gi|332354145|gb|EGJ33627.1| glycosyltransferase [Lyngbya majuscula 3L]
          Length = 1933

 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVY 158
           +P + + H    Q         VYL + Q  L +RQ+  A    E  ++I P T +  VY
Sbjct: 151 VPSSSERHCKQYQSGGLLEAVTVYLQQAQTYLKQRQWQQAIAACERAIKIAPDTAQ--VY 208

Query: 159 SLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            ++  + + +G    A  Y  +AL+I PD   V   +   Y   ++W  AI +
Sbjct: 209 KIWGNALQFMGQTTEAMGYYGQALEIEPDFAEVYANLGSLYAGQQDWQHAIAY 261


>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
 gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 8/123 (6%)

Query: 89  YTGLMSIAAHNIPLARKMHSY---VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           Y  ++S   H + L  K  SY   ++++H      L Y   V I     +  + HE  E+
Sbjct: 304 YVAVLSACVH-VGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDIL---GRGGLVHEAHEL 359

Query: 146 MLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           M ++P     +++     SCRI G+L  A+  A    ++ PD       +   Y  +K+W
Sbjct: 360 MTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKW 419

Query: 205 SRA 207
             A
Sbjct: 420 EEA 422


>gi|68489060|ref|XP_711643.1| hypothetical protein CaO19.13713 [Candida albicans SC5314]
 gi|68489199|ref|XP_711574.1| hypothetical protein CaO19.6356 [Candida albicans SC5314]
 gi|46432887|gb|EAK92350.1| hypothetical protein CaO19.6356 [Candida albicans SC5314]
 gi|46432961|gb|EAK92421.1| hypothetical protein CaO19.13713 [Candida albicans SC5314]
          Length = 911

 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           + +LQ P   E  VY + FE  RIG+L+S Q    KAL   P  PW+   ++   ++ K 
Sbjct: 734 QAILQNPNNPEIWVYKIQFEK-RIGNLSSLQNLTNKALKQFPTDPWL--WIINLSLIPKM 790

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIA 231
             R   FL+      K  N +  ILLI+
Sbjct: 791 SQRKTIFLDA----LKATNNSNLILLIS 814


>gi|290542313|ref|NP_001166561.1| transient receptor potential cation channel subfamily M member 8
           [Cavia porcellus]
 gi|255689716|gb|ACU30144.1| transient potential cation channel subfamily M member 8 [Cavia
           porcellus]
          Length = 1104

 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWNYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|311273292|ref|XP_003133798.1| PREDICTED: transient receptor potential cation channel subfamily M
           member 8-like [Sus scrofa]
          Length = 1104

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPLDKRRQLLWSYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|332995108|gb|AEF05163.1| heme biosynthesis protein [Alteromonas sp. SN2]
          Length = 390

 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 80/391 (20%), Positives = 152/391 (38%), Gaps = 33/391 (8%)

Query: 9   FVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSC 68
           F+++L++   I+       V I+ GN    TS      I+   + +W ++  +  + LS 
Sbjct: 14  FIVALIVGPMILGDKGY--VLISLGNTAIETSLIGFCIIIICAIISWYIISKLVLWTLSL 71

Query: 69  PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
                         K  +A Y GL S+AA ++   +  H  +SQ      E + YL   Q
Sbjct: 72  VTGSHRWFGALGERKRKRAFYHGLQSLAAGDL---KSAHKALSQTTNGDFEGVNYLAAAQ 128

Query: 129 IA-------------LAERQYNIAHEKLEM-MLQIPATREFAVYSL-YFESCRIGDLNSA 173
           +A             L   +Y+ A     + M +I  +      +L   +S    + N+ 
Sbjct: 129 VAQSQNDPQKARYFLLQAAEYDSAKVAATIVMARIDVSEGKYTDALEKLDSLDEEEANNP 188

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           Q    KA  ++    W T   +Q+ +    W +A+      K++   W++  A   +A  
Sbjct: 189 QVIQLKASIMAEQGQWQT---LQEKLSG--WRKALP-----KEDYTAWSQRIAKGKLAEI 238

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                  ++   +      +K  D    A I   + L+ Q    +A+ +L +  K  PHP
Sbjct: 239 ASKNGAAELKTHWEGLPRKIKQDDAYRAAYI---QQLLEQGMHAEAQTLLVEWQKRGPHP 295

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +   +T L   N    L+      + + E+VE    + ++A   G    A    + A+K
Sbjct: 296 ALFPYFTQLNIPNAAPSLRLLESWIKQDSENVELYSTLGRVAFNAGDDILAEKVLLKAVK 355

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
           +   K+  LLL+ I +    +T  + Y+ + 
Sbjct: 356 MESNKDDLLLLSAISERRHDSTTALQYYKEG 386


>gi|209886536|ref|YP_002290393.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
 gi|209874732|gb|ACI94528.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
          Length = 267

 Score = 37.7 bits (86), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 36/71 (50%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           ++G  + A+RY   AL I PD P V   +   YVL KE  RA   L + ++ A   +R R
Sbjct: 149 QMGKPDEARRYYANALKIRPDEPSVLSNLGMSYVLTKELPRAEATLRRAQQLAPNDSRIR 208

Query: 226 AILLIARSLEN 236
             L +A  L+ 
Sbjct: 209 QNLGLALGLQG 219


>gi|238878343|gb|EEQ41981.1| hypothetical protein CAWG_00175 [Candida albicans WO-1]
          Length = 912

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           + +LQ P   E  VY + FE  RIG+L+S Q    KAL   P  PW+   ++   ++ K 
Sbjct: 735 QAILQNPNNPEIWVYKIQFEK-RIGNLSSLQNLTNKALKQFPTDPWL--WIINLSLIPKM 791

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLI 230
             R   FL+      K  N +  ILLI
Sbjct: 792 SQRKTIFLDA----LKATNNSNLILLI 814


>gi|110597057|ref|ZP_01385346.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
 gi|110341248|gb|EAT59713.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
          Length = 573

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 153 REFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           R   VY L  +S  +  D   A+RY  KA    P  P + EA+V  Y++ KE+ +A + +
Sbjct: 327 RNGGVYLLRGQSMLQRQDAQGAERYFLKARSFVPGNPVIEEALVSAYIMQKEFRKASSII 386

Query: 212 NQKKK 216
            + KK
Sbjct: 387 VRAKK 391


>gi|149711231|ref|XP_001499536.1| PREDICTED: similar to transient receptor potential cation channel,
           subfamily M, member 8 [Equus caballus]
          Length = 1104

 Score = 37.4 bits (85), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C FI     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVACGFISFRKKPIDKHKKLLWYFVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|291410435|ref|XP_002721500.1| PREDICTED: transient receptor potential cation channel, subfamily
           M, member 8 [Oryctolagus cuniculus]
          Length = 1171

 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHRRLLWHYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|332815773|ref|XP_003309583.1| PREDICTED: transient receptor potential cation channel subfamily M
           member 8 [Pan troglodytes]
          Length = 1062

 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 652 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 711


>gi|297669766|ref|XP_002813060.1| PREDICTED: transient receptor potential cation channel subfamily M
           member 8-like [Pongo abelii]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|183396434|gb|ACC62111.1| transient receptor potential cation channel, subfamily M, member 8
           (predicted) [Rhinolophus ferrumequinum]
          Length = 1037

 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 643 KIILCLFIIPLVGCGFVSFRKKPMDKPRKLLWHYVAFFTSPFVVFSWNAVFYIAFLLLFA 702


>gi|281182712|ref|NP_001162392.1| transient receptor potential cation channel subfamily M member 8
           [Papio anubis]
 gi|162415923|gb|ABX89284.1| transient receptor potential cation channel, subfamily M, member 8
           (predicted) [Papio anubis]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|332259049|ref|XP_003278601.1| PREDICTED: transient receptor potential cation channel subfamily M
           member 8 [Nomascus leucogenys]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|32966583|gb|AAP92167.1| transient receptor potential subfamily M member 8 variant [Homo
           sapiens]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|109689695|ref|NP_076985.4| transient receptor potential cation channel subfamily M member 8
           [Homo sapiens]
 gi|143811469|sp|Q7Z2W7|TRPM8_HUMAN RecName: Full=Transient receptor potential cation channel subfamily
           M member 8; AltName: Full=Long transient receptor
           potential channel 6; Short=LTrpC-6; Short=LTrpC6;
           AltName: Full=Transient receptor potential p8;
           Short=Trp-p8
 gi|72537227|gb|AAZ73614.1| transient receptor potential subfamily M member 8 [Homo sapiens]
 gi|119591474|gb|EAW71068.1| transient receptor potential cation channel, subfamily M, member 8,
           isoform CRA_b [Homo sapiens]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|20147036|gb|AAM10446.1| transient receptor potential cation channel protein [Homo sapiens]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|19570794|dbj|BAB86335.1| LTRPC6 [Homo sapiens]
          Length = 1095

 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 685 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 744


>gi|169409477|gb|ACA57875.1| transient receptor potential cation channel, subfamily M, member 8
           (predicted) [Callicebus moloch]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|296205933|ref|XP_002749959.1| PREDICTED: transient receptor potential cation channel subfamily M
           member 8 [Callithrix jacchus]
 gi|166064935|gb|ABY79104.1| transient receptor potential cation channel, subfamily M, member 8
           (predicted) [Callithrix jacchus]
          Length = 1104

 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|226875253|gb|ACO88994.1| transient receptor potential cation channel, subfamily M, member 8
           (predicted) [Dasypus novemcinctus]
          Length = 1104

 Score = 36.6 bits (83), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++I   F+I LV C F+     P D    + W    + TSPFV+ S    F  A++LLFA
Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPIDKHKRLLWYYMAFFTSPFVVFSWNVVFYIAFLLLFA 753


>gi|313885849|ref|ZP_07819590.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924678|gb|EFR35446.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 391

 Score = 36.6 bits (83), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 21/195 (10%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           AI +  + K N   + +N    ++A++ +E  D  + I +     E LKL       S+ 
Sbjct: 195 AIKYGEELKGNG--YRQNEVYQILAQTYIEEGDTANYITTMQ---EGLKLFPKEPYYSVN 249

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE-NTVGKLKRALRLEEINKE 323
              + I QNK  +A   L +  ++NP +P++ ++   L  E N    +K   +  E++  
Sbjct: 250 LINTYIVQNKYDEARTFLAQAIELNPENPQLYDVMGKLYEESNEEEAIKWFSKALEVDPN 309

Query: 324 SVESLVIVSKI----ALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIEQANSHNTD 376
            VESL  + +I    A+E+   ++        M  A +K   LL   L  +++A S N D
Sbjct: 310 YVESLCNIGRIYYNKAVEVSDKEEG------GMAAAQKKRTALLNKALPYLQKAYSINPD 363

Query: 377 KILYWTQSALHAMPD 391
              Y   +  +A+ D
Sbjct: 364 ASYYLLGNIYYALGD 378


>gi|332300697|ref|YP_004442618.1| Tetratricopeptide TPR_1 repeat-containing protein [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177760|gb|AEE13450.1| Tetratricopeptide TPR_1 repeat-containing protein [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 400

 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 21/195 (10%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           AI +  + K N   + +N    ++A++ +E  D  + I +     E LKL       S+ 
Sbjct: 204 AIKYGEELKGNG--YRQNEVYQILAQTYIEEGDTANYITTMQ---EGLKLFPKEPYYSVN 258

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE-NTVGKLKRALRLEEINKE 323
              + I QNK  +A   L +  ++NP +P++ ++   L  E N    +K   +  E++  
Sbjct: 259 LINTYIVQNKYDEARTFLAQAIELNPENPQLYDVMGKLYEESNEEEAIKWFSKALEVDPN 318

Query: 324 SVESLVIVSKI----ALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIEQANSHNTD 376
            VESL  + +I    A+E+   ++        M  A +K   LL   L  +++A S N D
Sbjct: 319 YVESLCNIGRIYYNKAVEVSDKEEG------GMAAAQKKRTALLNKALPYLQKAYSINPD 372

Query: 377 KILYWTQSALHAMPD 391
              Y   +  +A+ D
Sbjct: 373 ASYYLLGNIYYALGD 387


Searching..................................................done


Results from round 2




>gi|254781033|ref|YP_003065446.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040710|gb|ACT57506.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 492

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 492/492 (100%), Positives = 492/492 (100%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA
Sbjct: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY
Sbjct: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA
Sbjct: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG
Sbjct: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT
Sbjct: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI
Sbjct: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420
           FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW
Sbjct: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420

Query: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480
           KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH
Sbjct: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480

Query: 481 IRQPDDPGIKEQ 492
           IRQPDDPGIKEQ
Sbjct: 481 IRQPDDPGIKEQ 492


>gi|254486881|ref|ZP_05100086.1| HemY domain protein [Roseobacter sp. GAI101]
 gi|214043750|gb|EEB84388.1| HemY domain protein [Roseobacter sp. GAI101]
          Length = 502

 Score =  501 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 107/505 (21%), Positives = 200/505 (39%), Gaps = 21/505 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +++++ +   I+ +      +      + +T     +   P   +++I+   +  W+   
Sbjct: 5   LIKIVVFVVAIAALTWGASFLLESSGGLQVTVMGTEFSFGPLQSVIAIIVLVIAVWLVLK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL AV  F       L     +    KGY+AL  GLM++A+    LA  +       
Sbjct: 65  IISLLIAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRLA--LSKAAKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E  + ++   +TR   V  +  +    GD ++A
Sbjct: 123 KYLERPELTNLLIAQAAEMAGDKRKAEETYKKLVANESTRFVGVRGILKQKLAEGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  + P      + +++     ++WS A   LN K KN         R  A+L 
Sbjct: 183 LKLAEKAFALKPKHADTGDILLKLQAEKEDWSGARETLNTKLKNGQLPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +G  I +   AIE+ +L  + I A++ AA S I Q K + A  +L+K W V
Sbjct: 243 LSEAKDVFTEGHSIEAREAAIEANRLSPDLIPAAVMAAHSYIDQGKPKYAARLLKKAWSV 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           + HP++A+ +  +  + T   +LKR   L     +  E+ ++++++ +      +A    
Sbjct: 303 HAHPDLASAFAAIAPDETPKERLKRFTALTRTQPDDPETKMLLAELNIANEDFPEARRSL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              ++  P      L+A IE+    +   +  W   AL     P WI D+  ++ + W P
Sbjct: 363 GNLVETDPTARSVTLMAAIERGEGASDTVVKGWLARALTVSRGPQWICDNCQHIHTNWKP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     WK P  S   +        L +    D      N+G     P   +  
Sbjct: 423 ICDNCHSFDTLAWKTPPMSEVAMPGGVQMLPLIVGAIED------NSGADAKPPVATRAD 476

Query: 468 SFEDSTIHPLDPHIRQPDDPGIKEQ 492
             E   I   D    +P +P +  +
Sbjct: 477 IEEAELIVDTDEVSEKPKEPEVTTE 501


>gi|163745151|ref|ZP_02152511.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45]
 gi|161381969|gb|EDQ06378.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45]
          Length = 501

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 104/498 (20%), Positives = 202/498 (40%), Gaps = 17/498 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           +++++ +  +++ +      +      + +T     Y   P   ++++L      W+LL 
Sbjct: 5   LIKIVLFVVLVAALAWGAGFLLESQGGIQLTVAGTEYTLGPLQSVIAVLLLMFAVWVLLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A   F       L     +    KGY+AL  GLM++A+    +A  M       
Sbjct: 65  IVALLSATWHFLNGDETALSRYFDRNRERKGYEALSDGLMALASGEGQVA--MAKAAKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A      +++   TR   V  +  +    GD  +A
Sbjct: 123 RYLKRPALTNLLTAQAAELAGDRRKAERTYRKLVEDEKTRFVGVRGIMKQKLADGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  + P      + +++      +W+ A   L  K KN         R  A+L 
Sbjct: 183 LKLAEKAFALKPKHEETGDTLLKLQADKHDWTGARQTLQAKYKNGHLPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + E   +G+ I +   AIE+ +L  + + A++ AA+S I+Q+K R A  +L+K W V
Sbjct: 243 LSEAREVIAEGNSIEAREAAIEANRLSPDLVPAAVMAARSYIAQDKPRYASKVLQKAWSV 302

Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           +PHP++A  +  +  + T   ++KR   L +   +  E+ ++++++ +      +A    
Sbjct: 303 HPHPDLAAAFAEVQPDETPQQRIKRFRALTKSQPDHPETKMLLAELHIANEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
              ++  P      L+A IE+    +   +  W   AL+    P WI ++ + + + W P
Sbjct: 363 GNLVETDPSARSVTLMAAIERGEGASDTVVKGWLTRALNVSRGPQWICENCHHIHAEWKP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +    K+    EWK P  S   + S      L +  P           + + +   + V+
Sbjct: 423 ICENCKSFDTLEWKTPPLSEVAMPSGVQMLPLIVGTPETTPAEGALATRTDDIEEAELVT 482

Query: 468 SFEDSTIHPLDPHIRQPD 485
             ++ T    D   R PD
Sbjct: 483 DPDEPTN--SDASKRAPD 498


>gi|84501232|ref|ZP_00999437.1| HemY domain protein [Oceanicola batsensis HTCC2597]
 gi|84390523|gb|EAQ03011.1| HemY domain protein [Oceanicola batsensis HTCC2597]
          Length = 502

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 107/500 (21%), Positives = 191/500 (38%), Gaps = 17/500 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           ++++I +  +++        +      V I  G      +P   +++ +   L  W+   
Sbjct: 5   LVKIIVFVALVAAATLGASYLLDMQGGVLIAMGGIEINLTPIKAVIAAVLLVLAVWLFLK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A+ RF       L     +    KGY+AL  GLM++A+     A  M      +
Sbjct: 65  LFGLLIALLRFINGDETALSRYFDRNRERKGYEALSDGLMALASGEGRRA--MSKASRAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A      + A    + +L    TR   V  +  +    GD ++A
Sbjct: 123 RFLDRPDLTTLLTAQAAEMVGDKDKAEAAYKKLLSDDRTRFVGVRGIMKQKLAAGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A KA  I P    V + +++      +W  A   L  K ++         R  A+L 
Sbjct: 183 LALAEKAFAIKPGHEEVQDTLLRLQAQRSDWKGARATLKAKLRHGNLPRDVHRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ +     +   I S   AIE+ KL  + I A++ AA+S I Q +KR A  +L+K W+ 
Sbjct: 243 LSEAKGVFSEDGTIESREAAIEANKLSPDLIPAAVMAARSYIDQGQKRYAARVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +LKR  +L +      ES ++++++ +      +A    
Sbjct: 303 APHPDLAAAFAEIEPDETPQERLKRFQQLVKSAPNHRESRLLMAELNIAAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
                  P      ++A IE+        +  W   A+ A   P W  ++  ++ + W P
Sbjct: 363 GDLASENPDARTLTIMAAIERGEGAPDAIVKGWLARAVSAPRGPQWTCENCHHIHAHWQP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +           WK P               L +    D      +   +         S
Sbjct: 423 ICDNCGAFDTLAWKTPPMGEAQAPVGTAMLPLIVGQIEDWGADAPDRPDREDEDMPS--S 480

Query: 468 SFEDSTIHPLDPHIRQPDDP 487
             ED+ I P DP  ++P+ P
Sbjct: 481 EPEDAEILPSDPPSQEPEKP 500


>gi|83941980|ref|ZP_00954442.1| HemY domain protein [Sulfitobacter sp. EE-36]
 gi|83847800|gb|EAP85675.1| HemY domain protein [Sulfitobacter sp. EE-36]
          Length = 503

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 105/501 (20%), Positives = 196/501 (39%), Gaps = 17/501 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +++++ +  VI+ +      +      + +T     Y   P   +++++   +  WI   
Sbjct: 5   LIKIVVFVAVIAAITWGASFLLESSGGLQVTVMGTEYSFGPLQSVIAVVLLIVAVWIMLK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL AV  F       L     +    KGY+AL  GLM++A+    L   M       
Sbjct: 65  IFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRL--AMAKAAKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E    ++    TR   V  +  +    GD  +A
Sbjct: 123 KYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  I P      + +++     ++W+ A   LN K KN         R  A+L 
Sbjct: 183 LKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +G+ I +   AIE+ +L  + I A++ AA   I Q K + A  +L+K W V
Sbjct: 243 LSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLKKAWDV 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +LKR   L  +  +  E+ ++++++ +      QA    
Sbjct: 303 QPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQARRSL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              ++  P      L+A IE+    +   +  W   AL     P WI D+  ++ + W P
Sbjct: 363 GDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIHASWKP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGK--KNHLPSIKK 465
           +     +     WK P  S   +        L +    D+  +        +  +   + 
Sbjct: 423 ICENCHSFDTLAWKTPPMSEVAMPGGVQMLPLIVGALEDNSGADAKPPVATRADIEDAEL 482

Query: 466 VSSFEDSTIHPLDPHIRQPDD 486
           +       + P++    QP+ 
Sbjct: 483 IDDTPAGAVDPVEKPATQPEK 503


>gi|83953029|ref|ZP_00961751.1| HemY domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83841997|gb|EAP81165.1| HemY domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 503

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 104/501 (20%), Positives = 195/501 (38%), Gaps = 17/501 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-------VILSILYFFLF 53
           +++++ +  VI+ +      +      + +T     Y   P        +++  ++  L 
Sbjct: 5   LIKIVVFVAVIAAITWGASFLLESSGGLQVTVMGTEYSFGPLQSVIAVVLLVVAVWIMLK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
            + LL AV  F       L     +    KGY+AL  GLM++A+    L   M       
Sbjct: 65  IFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRL--AMAKAAKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E    ++    TR   V  +  +    GD  +A
Sbjct: 123 KYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  I P      + +++     ++W+ A   LN K KN         R  A+L 
Sbjct: 183 LKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +G+ I +   AIE+ +L  + I A++ AA   I Q K + A  +L+K W V
Sbjct: 243 LSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLKKAWDV 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +LKR   L  +  +  E+ ++++++ +      QA    
Sbjct: 303 QPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQARRSL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              ++  P      L+A IE+    +   +  W   AL     P WI D+  ++ + W P
Sbjct: 363 GDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIHASWKP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGK--KNHLPSIKK 465
           +     +     WK P  S   +        L +    D+  +        +  +   + 
Sbjct: 423 ICENCHSFDTLAWKTPPMSEVAMPGGVQMLPLIVGALEDNSGADAKPPVATRADIEDAEL 482

Query: 466 VSSFEDSTIHPLDPHIRQPDD 486
           +       + P++    QP+ 
Sbjct: 483 IDDTPAGAVDPVEKPATQPEK 503


>gi|315122373|ref|YP_004062862.1| HemY domain-containing protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495775|gb|ADR52374.1| HemY domain-containing protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 487

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 290/480 (60%), Positives = 368/480 (76%), Gaps = 4/480 (0%)

Query: 14  VICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLF 73
           +ICSFI +S+YP+D+ +TWGNR+Y+TSPFV+LSI+Y  +F ++L+  +SRFFLSCP+ + 
Sbjct: 1   MICSFIAISYYPDDIYVTWGNRIYQTSPFVMLSIVYILIFTFMLISKISRFFLSCPSTIA 60

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
           ++ HKRNY KGYK L  GL+SI A NIPLARKM SY+S +H FHNE L +LLE QIAL+E
Sbjct: 61  NIFHKRNYAKGYKELSAGLISITAQNIPLARKMFSYLSHRHIFHNESLFHLLEAQIALSE 120

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           ++++IA EK EMMLQIP TREFA+Y+LY E  RIGDL SAQ YA KAL ISP   W  EA
Sbjct: 121 KKHHIAREKFEMMLQIPETREFAIYNLYCEFYRIGDLKSAQCYAKKALKISPYISWGIEA 180

Query: 194 VVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q Y L KEWS+AI FLN+ KK  N + +N ++AILL ARSLENA+KGD++ASY+DA+ 
Sbjct: 181 MLQYYALEKEWSKAIDFLNKNKKYENIETYNHHQAILLTARSLENAEKGDVVASYNDAMV 240

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
            LKLC +SIMASICAAK+LI QNKK KA V+LEKIW++NPHPEIA IYT +LS N   ++
Sbjct: 241 VLKLCKHSIMASICAAKALILQNKKNKAAVVLEKIWEINPHPEIAYIYTIILSNNATERM 300

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
            RAL+LE INK+++ESL+ V+KI+LE G+I QA  KAMLA K  PRK IFLLLA+IE+A+
Sbjct: 301 NRALKLEAINKKNIESLITVAKISLETGNIQQAQTKAMLAAKANPRKGIFLLLAKIERAS 360

Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS 431
           S+N DKILYWTQ AL+  PDPLWISDDGY SS WLPLSP SK LC FEWK+P K PEY +
Sbjct: 361 SNNLDKILYWTQRALYTEPDPLWISDDGYCSSTWLPLSPTSKKLCRFEWKVPAKIPEYTT 420

Query: 432 SEN-INFSLEMAYPADDLQSMLNNGKKNHLPSI-KKVSSFEDSTIHPLDPHIRQPDDPGI 489
           +++ I++     +     ++  N   KN  PSI +     ++  I  LDP IRQPDDPG+
Sbjct: 421 NKDLISYDESETFMTHLQETKRNKNIKNPYPSIHQDYHHPKNRNILSLDPSIRQPDDPGV 480


>gi|240851346|ref|YP_002972749.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup]
 gi|240268469|gb|ACS52057.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup]
          Length = 519

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 141/510 (27%), Positives = 248/510 (48%), Gaps = 22/510 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++  +F  V+++     +T+ +  +  S   +LS+L       +LL+ 
Sbjct: 1   MIRVFIYTFVVCILGLAFAWVANHNGIFVLTFLHFRFSASLLTVLSVLILLFVTLVLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +  FF S P+ L + L+KR+  +GY+AL  G+++  A +  +A+KM + V++      E 
Sbjct: 61  LLSFFFSLPSALSNYLYKRHKKRGYEALSKGILATFAGDSMVAQKMEAQVAKYLAGKQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV LL+ Q    +     A    E M +  +T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LVKLLQAQTLSLQNNSVRAIGLYEGMRKEDSTKLVGLYGLFCEAMKSKAYEAAQQYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233
           L +SP   W  +AV+ +     +W +A+    + +K          E    + +LL  ++
Sbjct: 181 LTLSPALLWAHQAVLDRLSTEGKWDKALAIFERAQKALPRSVRATPERQHIQVLLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L   D    + +    +++ KL  + +   + AA  L   N+ RKA+ ++   W+ +PHP
Sbjct: 241 LSLFD-THPVQAREAILKAHKLAPDFVPIIVIAADILYKLNETRKADKMIIAAWQKDPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++A +Y     E  +G+LKRA  L   NK++ ES  +++K AL+ G    A  +A  A++
Sbjct: 300 DLAALYLE-REEGAIGRLKRARTLASYNKDAFESAFLIAKAALDAGETAIAREQAKKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             PR+ ++LLLA IE+A  +N   +  W   AL A  DP+W+  DG + S W  +SPIS 
Sbjct: 359 YHPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMC-DGSIFSSWSAVSPISG 417

Query: 414 TLCYFEWKIPTKSPEY-ISSENINFSLEMAYPADDLQSMLNNGKKNHLPS---------- 462
            L  FEWK P   P   + ++NI    +           + + K   L            
Sbjct: 418 RLGGFEWKAPPCMPSLTLEADNIVPKKQDKEYVTGKSDGVEDKKLEKLTPIDDSLLHNVQ 477

Query: 463 IKKVSSFEDSTIHPLDPHIRQPDDPGIKEQ 492
           ++K    E         H+   DDPG+K +
Sbjct: 478 VEKQDIKEQDVKMFSQTHL-NVDDPGVKTE 506


>gi|319899462|ref|YP_004159559.1| hypothetical protein BARCL_1326 [Bartonella clarridgeiae 73]
 gi|319403430|emb|CBI76998.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 514

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 130/471 (27%), Positives = 215/471 (45%), Gaps = 12/471 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++   F   ++    + IT+    +  S   I+S L   L   + L+ 
Sbjct: 1   MIRIFIYVFVVCVIGAVFSWCANNNSFLVITFLQMRFTVSLLTIVSGLVILLAILVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+    +    +G KAL  GL++  A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPRSLYSFFSRHYQKQGGKALTQGLLAAFAGDYMTAQKMEVRALRYLVKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +   T+    Y L+ E+      + AQ YA +A
Sbjct: 121 LIKLLRAQILFLQKDSMNAIVLYEEMKKEELTKLAGFYGLFREAINTKAYDIAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233
           L +SP   W  + V+ +     +W++A+   ++ ++          E     A+LL   +
Sbjct: 181 LALSPTLLWAQQFVLDRLSAEGKWNKALDVFHRAQRALPRSEHCTPERKYIHALLLSGLA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L   +   ++ +    +++ KL  + +  ++  A  L    + RKA+ I+ K W+ NPHP
Sbjct: 241 LHFVE-TQLVEARKAILKAHKLMPDFVPITVIMADILYKLKEVRKADKIIIKAWQENPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +   +Y     E+ VG+LKRA +L   NK+  ES  IV+K AL+ G ++ A   A  A+ 
Sbjct: 300 DFGTLYLR-REESAVGRLKRAKKLASYNKDIFESSFIVAKAALDAGELELARECAQKALT 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             PR+ ++LLLA IE+A  ++      W   AL A  DP W   DG   S W  +SPIS 
Sbjct: 359 YHPREGVYLLLADIEEAQGNDQG-SRQWLSLALRAERDPAWAC-DGSFFSSWSAVSPISG 416

Query: 414 TLCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSI 463
            L  FEWK+P + SP  +  +N+    E        +  + +       SI
Sbjct: 417 RLGRFEWKVPPRCSPITLEVDNMVLKKEDKKDTIYEKEAVKDKSFEKKSSI 467


>gi|121602299|ref|YP_988402.1| hypothetical protein BARBAKC583_0064 [Bartonella bacilliformis
           KC583]
 gi|120614476|gb|ABM45077.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 531

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 135/518 (26%), Positives = 240/518 (46%), Gaps = 31/518 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ Y F + ++   F  V+++   V IT+    +  S   +LS+    L    L++ 
Sbjct: 1   MIRVVVYSFAVCVLGALFGWVANHNSIVVITFLQTRFAISLLTLLSVSIVLLVMLALVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  L      R   KG +AL  GL+++ + +   A+KM +   +    ++E 
Sbjct: 61  LLRGLFFAPNALRRYFSTRRQKKGREALSQGLLAVFSGDYVTAKKMETCALKYLANNHEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL+ Q    ++    A    E M Q   T+   +Y LY E+  + +  +AQ YA +A
Sbjct: 121 LMKLLQAQTLFLQKDSIRAIGFYEEMRQETPTKLAGLYGLYREAVAMKEDEAAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-------RAILLIARS 233
           L +SP   W  +AV+ +     +W +A+    + +K     +R         A+LL  ++
Sbjct: 181 LALSPALLWAHQAVIDRLSAEGQWDKALDVFEKAQKALPRADRWTAERNYTYALLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L+   K   + +    +++ KL  + +  ++  A  L   N+ RKA+ I+   WK  PHP
Sbjct: 241 LQLF-KTHPVKARTAILKAHKLLPDFVPITVITADILYKSNEVRKADKIIFNAWKKEPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++   Y     E  V +LK+A +L   N+++ ES  +V+K AL+ G ++ A  +A  A++
Sbjct: 300 DLGACYLK-NEERAVERLKKAKKLASYNEDTFESAFLVAKAALDAGEVEFAREQAQKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
           + PR+ ++LLLA IE+A  ++   +  W   AL A  DP W+  DG L S W  +SPIS 
Sbjct: 359 LHPRESVYLLLADIEEAQGNDQLLVRQWLSLALRAERDPTWMC-DGTLFSSWSAVSPISG 417

Query: 414 TLCYFEWKIPTKS-PEYISSENINFSL--EMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470
            L  FEWK P +S P  +  + I      ++          +   K+     + +++   
Sbjct: 418 RLGCFEWKAPPRSLPLTLEIDPIEPKDVGDVGPMVLKNVDPVMAEKEEKEDVVTEITFVN 477

Query: 471 DSTIHPLDPHIR------------------QPDDPGIK 490
           D  ++ + P                       DDPG+K
Sbjct: 478 DELLNEISPIKDGFLPQNSAKKKISNQTRLNVDDPGVK 515


>gi|110677862|ref|YP_680869.1| hypothetical protein RD1_0473 [Roseobacter denitrificans OCh 114]
 gi|109453978|gb|ABG30183.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 492

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 106/498 (21%), Positives = 193/498 (38%), Gaps = 28/498 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           ++++I +   ++ +    + +      V +      +  SP   +++ +      W+ L 
Sbjct: 5   LIKIILFVVAVAALAMGAVYLLESEGGVQVQVMGTEFTFSPIQSVIAAVVLIFVVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  RF       +     +    KG++AL  GLM++A+    +A  M+     +
Sbjct: 65  LLSLLVACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MNKAAKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  LL  Q A        A E  + ++   ATR   V  +  +    GD ++A
Sbjct: 123 RYLNKPELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  I P    V + +++     ++WS A   L+ K K          R  A+L 
Sbjct: 183 LQLAEKAFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +       I     AIE+ KL  + I A++ AA   + QN+ R A  +L+K W+V
Sbjct: 243 LSEAKDILSDASSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWEV 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           +PHP++A  +  +   E    ++KR + +  I  E+ E+ ++++++ +      +A    
Sbjct: 303 HPHPDLAAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
               +         L+A IE+        +  W   AL     P WI D+  ++   W P
Sbjct: 363 GDLAETDATARSVTLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHREWGP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
                ++     WK P  S             EMA P       L  G     P      
Sbjct: 423 FCENCESFDTLAWKTPPMS-------------EMAMPGGMQMLPLIVGALEEKPDETSGD 469

Query: 468 SFEDSTIHPLDPHIRQPD 485
             ED+ I P       P+
Sbjct: 470 IIEDAEIIPDSMDSAAPE 487


>gi|325294024|ref|YP_004279888.1| HemY domain protein [Agrobacterium sp. H13-3]
 gi|325061877|gb|ADY65568.1| HemY domain protein [Agrobacterium sp. H13-3]
          Length = 535

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 167/522 (31%), Positives = 262/522 (50%), Gaps = 34/522 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ +  ++  +   F  ++  P  +SI W  +L   S  V  SI+   + A +L++ 
Sbjct: 1   MTRILTFVLIVLALGFGFSWLADRPGVLSIVWQGQLIEMSLMVAASIVAALVAAVMLVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V     + P         R  D+GY+AL TGL++  A N  LARKM +      +   E 
Sbjct: 61  VVNAIWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+ Q  L E +Y+ A  K E M + P TRE  +  LY E+ R G   +AQ+YA  A
Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAHEAAQQYAEDA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            + +P  PW  +A ++      EW  AI  L+Q+K        E  R +A+LL A++ E 
Sbjct: 181 AEKAPYLPWAAQATLETRCRNGEWDDAIRLLDQQKAAGVIQRGEAERLKAVLLTAKAGEK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D + +  DA ++LKL  + + A++ AAKS + ++  RKA  ++E +WK +PH +IA
Sbjct: 241 LE-SDPVGAREDAKQALKLAKSLVPAALIAAKSYLREDNLRKAAAVMEPVWKNDPHSQIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           ++Y    S +T   +LKRA RLE +   ++ESL  V++ AL+     +A AKA  A +I 
Sbjct: 300 DLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLL+A IE+A + +  ++ YW   AL A  DP+W++ DG  S  WLP+SP++  L
Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPVWVA-DGVTSEKWLPVSPVTGRL 418

Query: 416 CYFEWKIPT------------------------KSPEYISSENINFSLEMAYPADDLQSM 451
             FEWK P                         ++P  I  E     + +  PA      
Sbjct: 419 DAFEWKAPFGQLEGPVEDLTIENAIAAAPARTEQAPTPIVVEVAPQPIVVTKPAPIEVKP 478

Query: 452 LNNGKKNHLPSIKKVSS---FEDSTIHPLDPHIRQPDDPGIK 490
             +  K   P+  +V       D+   P+      PDDPG+K
Sbjct: 479 DVSTPKEKKPATNEVPVEARPADAKTEPVPFFGGAPDDPGVK 520


>gi|149912845|ref|ZP_01901379.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b]
 gi|149813251|gb|EDM73077.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b]
          Length = 496

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 105/497 (21%), Positives = 197/497 (39%), Gaps = 28/497 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL--- 58
           L+++ +  ++S        +      V I +G + +  +P   +  L   + A  LL   
Sbjct: 6   LKIVGFIALVSAATLGAAHLIEMEGGVRIVFGGQEFNLTPIKAVIALIVLVIALWLLLKL 65

Query: 59  ----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114
                A  +F       +     K   +KG++AL  G+M++A+    LA  M      + 
Sbjct: 66  VSLLVATLKFINGDETAISRYFDKNRQEKGFRALSEGMMALASGEGDLA--MSKASKAEK 123

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
                 L  LL  Q A        A    + +L+   TR   V  L  +    GD  +A 
Sbjct: 124 YLRKPDLTNLLTAQAAELSGDTRKAELVYKKLLKDDRTRFVGVRGLMRQKLAAGDTETAL 183

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230
           + A  A  + P    V +A+++      +W  A   LN K K          R  A+L +
Sbjct: 184 KLAKTAFALKPRHGEVQDALLRLQAQTADWKGARETLNAKLKYGSLPRDLHKRRDAVLAL 243

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           + + +  D+G  I +   AIE+ +L  + + A++ AA+S ISQ  KR A  + +K W V+
Sbjct: 244 SEAKDVLDEGKDIEAREAAIEANRLSPDLVPAAVLAARSYISQGSKRYATRVTKKAWGVH 303

Query: 291 PHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           PHP++A  +  +  + T   +LKR  +L  ++ ++ E+ ++ +++ L       A     
Sbjct: 304 PHPDLAAAFAEIEPDETPAQRLKRFSKLIAMHPDNRETKLLKAELHLAAEDFPAARRALG 363

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPL 408
             ++  P   +  ++A IE+    +   +  W   AL A   P W+ D+  ++ + W P 
Sbjct: 364 DLVETDPDARVLTIMAAIERGEGSSDAVVKGWLARALSAPRGPQWVCDNCQHIHAEWAPA 423

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
                      WK P  S    S+      L +             G     P+ ++ + 
Sbjct: 424 CDHCNAFDTLTWKTPPVSTMTTSTGIEMLPLIV-------------GAIEQKPTEEEQTE 470

Query: 469 FEDSTIHPLDPHIRQPD 485
            +   +   +     P+
Sbjct: 471 PDGDDVLDAEVVDETPE 487


>gi|254510666|ref|ZP_05122733.1| HemY domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221534377|gb|EEE37365.1| HemY domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 498

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 105/496 (21%), Positives = 201/496 (40%), Gaps = 16/496 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA------ 54
           +L+++ +  +I L+      +      V IT     Y   P      L   +FA      
Sbjct: 5   LLKILVFVAIIGLLAMGAGFLMESSGGVQITVAGTEYTLGPLQSAIALGVLVFAVWLFFK 64

Query: 55  -WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       L     +    +GY+AL  GLM++A+    +A  M      +
Sbjct: 65  LLTLLVATLKFLNGDETALSRYFDRSREKRGYQALADGLMALASGEGRVA--MTKANKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  LL  Q A        A E  + ++   +TR   V  +  +    GD  +A
Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKASETYKKLVANNSTRFVGVRGIMKQKLSEGDDETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KAL I P      + ++     A++W+ A + LN K K        + R  A+L 
Sbjct: 183 LKLAEKALAIKPRHEETQDVLLNLQTRAQDWAGARSTLNSKLKAGYLPRDVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +  D+   +     AIE+ +L  + + A+  AA++ I + K R A  IL+K W+ 
Sbjct: 243 LSEAKDILDETASVEQQEHAIEANRLSPDLVPAAAMAARAYIEKGKPRAAAKILKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +   + + T   ++KR   L  I+ +++E+ +I++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEAVPDETPEQRIKRFTALTRIHPDNMETRLILAELNIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
              ++       + L+A IE+    +   +  W   AL+A   P W+ D+ + + + W P
Sbjct: 363 GDVVEKQGDARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCDNCHDIQAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     W+ P ++PE  S   ++    +    +D        +           
Sbjct: 423 ICQNCGSFDTLSWQTP-QTPEIASVTGVHMLPLIVGALEDQSEPEAVEEAEEPEDTATED 481

Query: 468 SFEDSTIHPLDPHIRQ 483
             E          +RQ
Sbjct: 482 VIEVHAEPATTEEVRQ 497


>gi|159185310|ref|NP_355592.2| hypothetical protein Atu2656 [Agrobacterium tumefaciens str. C58]
 gi|159140568|gb|AAK88377.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 538

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 165/525 (31%), Positives = 256/525 (48%), Gaps = 37/525 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  ++  +   F  ++  P  +SI W  +L   S  V  SI+   + A +L++ 
Sbjct: 1   MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V     + P         R  D+GY+AL TGL++  A N  LARKM +      +   E 
Sbjct: 61  VVNAVWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+ Q  L E +Y+ A  K E M + P TRE  +  LY E+ R G   +AQ+YA  A
Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAYEAAQQYAEDA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            + +P  PW  +A ++      +W  AI  L+Q+K  +     E  R +A+LL A++ E 
Sbjct: 181 AEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D +++  DA  +LKL    + A++ AAKS + ++  RKA  +LE +WK  PHP+IA
Sbjct: 241 LE-SDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y    S +T   +LKRA RLE +   ++ESL  V++ AL+     +A AKA  A +I 
Sbjct: 300 QLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLL+A IE+A + +  ++ YW   AL A  DP W++ DG +S  WLP+SP++  L
Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVA-DGIVSEKWLPVSPVTGRL 418

Query: 416 CYFEWKIP---TKSP--------------------------EYISSENINFSLEMAYPAD 446
             FEWK P    + P                          E             A P +
Sbjct: 419 DAFEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIE 478

Query: 447 DLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIR-QPDDPGIK 490
               +    +   +P    V +          P     PDDPG+K
Sbjct: 479 VKPIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVK 523


>gi|163869275|ref|YP_001610531.1| hypothetical protein Btr_2583 [Bartonella tribocorum CIP 105476]
 gi|161018978|emb|CAK02536.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 520

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 138/514 (26%), Positives = 249/514 (48%), Gaps = 30/514 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++  +F+ V+++     +T+ +  +  S   +LS+L       +LL+ 
Sbjct: 1   MIRVFIYTFVVCILGLAFVWVANHNGVFVLTFLHFRFSASLLTVLSVLTLLFVTLVLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +  FF S P+ L +  +KR   +GY+AL  G+++  A +  +A+KM + V++      E 
Sbjct: 61  LLSFFFSIPSALSNYFYKRQRKRGYEALSKGILATFAGDSMVAQKMEARVAKYLAGKQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV  L+ QI   +     A    E M +   T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LVKFLKAQILSLQNNSVRAISLYEEMRKEDPTKLVGLYGLFREAMKSKAYEAAQQYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233
           L +SP   W  +AV+ +     +W +A+T   + +K          E    + +LL  ++
Sbjct: 181 LTLSPALLWAHQAVLDRLGAEGKWDKALTVFERAQKALPRSVRSTPERQHIQVLLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L   +    + +    +++ KL  + +  +I AA  L   N+ RKA+ ++   W+  PHP
Sbjct: 241 LHLFE-THPVQAREAILKAHKLAPDFVPITIIAADILYKLNETRKADKMIIAAWQKEPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++  +Y     E  +G+LKRA  L   NK+  ES  ++SK AL+ G    A  +A  A++
Sbjct: 300 DLGTLYIE-REEGAIGRLKRAKTLASYNKDVFESAFLISKAALDAGETILAREQAQKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             PR+ ++LLLA IE+A  +N   +  W   AL A  DP+W+ + G + S W  +SPIS 
Sbjct: 359 YHPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMCE-GSIFSSWSAVSPISG 417

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
            L  FEWK P + P          ++ +     D + ++   +      ++K++  +DS 
Sbjct: 418 RLGCFEWKAPPRLPSLTLE-----AVNIVPKKQDKEDVVEESEGVEDKKLEKLTPIDDSF 472

Query: 474 IHPLDPHIR---------------QPDDPGIKEQ 492
           +H      +                 DDPG+K +
Sbjct: 473 LHNAQVEKQDIKEQDAKTFSQIHLNVDDPGVKTE 506


>gi|255264670|ref|ZP_05344012.1| HemY domain protein [Thalassiobium sp. R2A62]
 gi|255107005|gb|EET49679.1| HemY domain protein [Thalassiobium sp. R2A62]
          Length = 484

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 87/481 (18%), Positives = 189/481 (39%), Gaps = 15/481 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           + +++ +  +++ +      +        +    + +  S   ++L  +      W+   
Sbjct: 5   LFKILFFVAIVAALALGVERLMQIEGGAVVEIAGQEFELSVLHLVLGAIAIIFLVWLGFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       +    ++    KG+ AL  G+M++A+    +A  +      +
Sbjct: 65  IFGLLVATFKFLNGDETAISRYFNRNRERKGFDALSDGMMALASGEGRVA--LAKASRAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A +  + +L+   TR   V  +  +  + GD ++A
Sbjct: 123 KYLERPELTNLLTAQAAEMAGDRVKAEQTYKRLLEDDRTRFVGVRGIMKQKLQAGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  + P    + + +++    + +W+ A   L+ K K+         R  A+L 
Sbjct: 183 LKLAEKAFALKPKHVEIQDTLLKLQADSSDWAGARRTLSAKLKSGSLPRDVHRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +    G+ I +   AIE+ +L  + I A++ AA+S I Q + R A  +L+K W+ 
Sbjct: 243 LSEARDILGSGESIEAREAAIEANRLSPDLIPAAVMAARSYIEQGQPRYAARVLKKTWEA 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++   +  +  + T   ++KR   L   +    E+ ++++++ +      +A    
Sbjct: 303 QPHPDLGAAFAEIAPDETPVARIKRFRALARAHPNHAETQMLMAELHIANEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
                  P      ++A IE+    +   +  W   AL A   P WI D+   + + W P
Sbjct: 363 GELATTEPTARSLAIMAAIERGAGADDAVVRGWLTRALSAPRGPQWICDNCSNIHAAWSP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
                 +     WK P      + +      L +  P  ++           + +++  S
Sbjct: 423 TCDNCGSFDTLTWKTPPAGEVTMPAATEMLPLLVGTPQSEVVEDAVEVTHAEVIAVEDKS 482

Query: 468 S 468
            
Sbjct: 483 D 483


>gi|319406345|emb|CBI79982.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
          Length = 481

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 126/471 (26%), Positives = 209/471 (44%), Gaps = 14/471 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y F +  +   F   S+    + IT+    +  S   I+S L   L   + L+ 
Sbjct: 1   MIRIFIYIFAVCAIGAVFSWGSNNNNFLVITFLQMRFTVSLLTIISGLVILLTILVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+     R  + G KAL  GL+++ A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPGTLYSFFSGRYQEYGRKALIQGLLAVFAGDYIAAQKMEIRALKYLVKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +   T+   +Y L+ E+      + AQ YA +A
Sbjct: 121 LIKLLRAQILSLQKDSMKAIALYEEMQKEEPTKLAGLYGLFREAINTKAYDVAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENA 237
           L +SP   W  + V+ +     +W++A+   ++ ++   ++  +   R           A
Sbjct: 181 LALSPALSWAQQFVLDRLSAEGQWNKALDVFHRAQRALPHSDHYTSERKYTHALLLSGLA 240

Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
               +  ++ +    +++ KL  + +  ++     L    + RKA+ ++ K W+ NPHP+
Sbjct: 241 LHLIETQLMEARKAILKAHKLMPDFVPITVIMVDILYRLKEVRKADKMIIKAWQKNPHPD 300

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              +Y     E+ VG+LKRA  L   NK+  ES  IV+K AL+ G ++ A   A  A+  
Sbjct: 301 FGTLYLR-REESAVGRLKRAKTLASYNKDIFESSFIVAKAALDAGELELAREYAQRALTY 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
            PR+ ++LLLA IE+A  +       W   AL A  DP W   DG     W  +SPIS  
Sbjct: 360 HPRESVYLLLADIEEAQGNGQG-SRQWLSLALCAERDPAWAC-DGSFFPFWSAVSPISGR 417

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
           L   EWK+P + P      +      MA   +D +  +N  K     S +K
Sbjct: 418 LGRCEWKVPPRCPPITLEIDN-----MALKKEDKKGPVNEKKVIKDKSFEK 463


>gi|114765154|ref|ZP_01444298.1| HemY domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114542429|gb|EAU45456.1| HemY domain protein [Roseovarius sp. HTCC2601]
          Length = 511

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 101/510 (19%), Positives = 197/510 (38%), Gaps = 23/510 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWI---- 56
           +L++I +  V++ +      V      + IT G   +   P   +  +   + A      
Sbjct: 5   LLKIILFVAVVAALTLGAGYVMESQGGIQITAGGYEFNLGPLQSVIAVIVLVIALYVVFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL AV +F       L     +    KGY+AL  G++++++    LA  M       
Sbjct: 65  LVSLLIAVLKFINGDDTALSRYFDRNRERKGYQALSEGMLALSSGEGKLA--MAKAQKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              H   L  LL  Q A        A E  + ++    TR   +  +       GD  +A
Sbjct: 123 RYLHRPGLTNLLTAQAAEMTGDTRKAEEVYKKLITNDETRFVGIRGMMKLKLAKGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A +A  + P  P + + ++Q      +W  A   L+ K K+       + R  A+L 
Sbjct: 183 LKLAERAFALKPKHPEIQDTLLQLQAQKHDWRGARQTLSAKLKHGSLPRDVYRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +   I +   AI S K   + I  +  AA++ I++ +++KA  IL+K W V
Sbjct: 243 LSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARAYIARGEQKKAVRILKKTWSV 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   ++KR   +  I  +  E+ ++ +++AL      +A    
Sbjct: 303 QPHPDLAAAFAEIAPDETPAERMKRFRTITSIRPDHRETRLLRAELALAAEDFPEARRAM 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P      ++A I +       ++  W   AL A   P W+ D   ++   W+P
Sbjct: 363 GDLVDKEPDARTLTVMAAIARGEGAPETEVRGWLAKALVAPRGPQWVCDSCHHIHGEWVP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSI---- 463
           +           W  P +S +   +      L +    D  +      +    P I    
Sbjct: 423 VCENCGGFDTLSWTTPPQS-DAAPAGAEMLPLIVGALEDTSKDESAQAEAEDAPEILTPN 481

Query: 464 ---KKVSSFEDSTIHPLDPHIRQPDDPGIK 490
              ++  +  + T+   +    +P+  G K
Sbjct: 482 PPTEEGKTAAEETVEDAEEVSDEPEKEGAK 511


>gi|49474780|ref|YP_032822.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse]
 gi|49240284|emb|CAF26758.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse]
          Length = 518

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 139/509 (27%), Positives = 243/509 (47%), Gaps = 22/509 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ Y FV+ ++  +F  V+++ + + IT+ +  +  S   +LS+L  FL   + L+ 
Sbjct: 1   MTRVLIYTFVVCMLGLAFGWVANHNDVLIITFLHFRFSISLLTLLSVLILFLGILVFLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +     S P  L +  +KR    GY+AL  G+++  A +   A+KM + V +     +E 
Sbjct: 61  LLSVLFSLPGTLSNYFYKRGQKLGYEALSQGVLAAFAGDGVAAKKMEARVVKYLAGKHEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV LL+ Q    +     A    E M +   T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LVKLLQAQALSLQNNSARAISLYEEMRKETPTKLAGLYGLFREAMKANAYEAAQQYAQEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233
           L +SP   W  + V+ +      W +A+    + +K       +  E    +A+LL  ++
Sbjct: 181 LALSPALLWAYQLVLDRLSAQGRWDKALDVFERAQKVLPRSVRSTPERQHVQALLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L    +     +    +++ +L  + +  ++ AA  L   N+ RKA+ ++   W+ NPHP
Sbjct: 241 LHLF-RTHPTDARKVILKAHRLVPDFVPITVIAADILYKLNETRKADKMIIAAWQKNPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +  +Y     E  VG+LK+A  L   +K++ ES  +V+K AL+ G    A  +A  A++
Sbjct: 300 NLGALYLE-REEGAVGRLKKAKALASYSKDTFESAFLVAKAALDAGERVLAREQAQKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
              R+ ++LLLA IE+A  +N   +  W   AL A  DP+W+  DG + S WLP+SPIS 
Sbjct: 359 YHRRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWLPVSPISG 417

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
            L  FEWK P   P      +    L      D    M  N  ++ L  + +  + ++  
Sbjct: 418 RLGRFEWKAPPSPPPLTLETDNTIVLTKKSQEDKNDIMGKNVVEDKL--LNEFPAVKNDL 475

Query: 474 IHPLDPHIR----------QPDDPGIKEQ 492
           +H    + +            DDPGIK +
Sbjct: 476 LHSAQTNKQGARQSSKTRLNVDDPGIKTE 504


>gi|319409418|emb|CBI83064.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
           R1]
          Length = 510

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 132/502 (26%), Positives = 230/502 (45%), Gaps = 18/502 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++  +F  V+ +   V+IT+ +     S    LS    FL    +L+ 
Sbjct: 1   MIRVFIYIFVVCVLGAAFGWVASHNSVVTITFMHTRLSISLLAFLSTFIVFLG---ILWG 57

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P   ++  + R   +G +AL  GL++    +   A+KM +   +    + E 
Sbjct: 58  LLYVVCFAPGAFYNYFYTRRQRRGREALSQGLLAAFIGDHLTAQKMETRALKYLEENCEP 117

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL+ Q  + ++    A    E M Q  +T+   +Y L+ E+       +AQ YA +A
Sbjct: 118 LIKLLQAQTLVLQKDSIRAIHLYEEMRQKKSTKLAGLYGLFREAMDTKTYEAAQHYAQEA 177

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233
             +SP   W  +AV+ +     +W  A+    + +K          E N   A+LL  ++
Sbjct: 178 FTLSPSLVWAHQAVLDRLSAEGQWDEALDVFEKVQKALPRSARLTAERNHTHALLLSGKA 237

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L    K   + +    +++ KL  +    ++  A  L   N+ RKA+ I+ + WK +PHP
Sbjct: 238 LHVF-KIHPVKARSAILKAHKLVPDFGPITVITAGILYKLNETRKADKIIIEAWKKDPHP 296

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +   +Y     E  VG+LK+A +L   NK + ES  +++K AL+ G +  A  +A  A+ 
Sbjct: 297 DFGALYLG-REERAVGRLKKAKKLASYNKNTFESAFLIAKAALDAGELTLAREQAKKALN 355

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             PR+ ++LLLA IE+   ++   +  W   A +A  DP WI D+  L S W  +SPIS 
Sbjct: 356 YHPRESVYLLLADIEEVQGNDQGLVHQWLSLARNAERDPTWICDN-TLFSSWSAVSPISG 414

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
            L  FEWK P +    ++ E  +  L+     +  +    +   +  P  +  S FE  T
Sbjct: 415 RLGCFEWKAPPRRFP-LTLEADDIVLKKEDKQNVTEIAFKDNLLSKCPPKESDSPFEVYT 473

Query: 474 IHPLDPHIRQ----PDDPGIKE 491
               +  + Q     DD  +K 
Sbjct: 474 NKQDEETLNQIHLDVDDSNVKT 495


>gi|259417169|ref|ZP_05741088.1| HemY domain protein [Silicibacter sp. TrichCH4B]
 gi|259346075|gb|EEW57889.1| HemY domain protein [Silicibacter sp. TrichCH4B]
          Length = 497

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 105/495 (21%), Positives = 201/495 (40%), Gaps = 16/495 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +L+++ +  +++L+     ++      V IT     Y       +++++   +  W+   
Sbjct: 5   LLKILVFVAIVALMAFGAGVLMETAGGVQITVAGIEYTLGALQSVMALVALMVLTWLFFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  RF       L     K    +GY+AL   LM++A      A  +      +
Sbjct: 65  LLSLLIATLRFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LSKAAKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               +  L  L+  Q A      + A E  + +L   +TR   V  +  +    GD  +A
Sbjct: 123 RYLQDPALTDLVVAQAAEMAGDTHKASEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P    V + +++    A++W+ A   L  K K      + + R  A+L 
Sbjct: 183 RQLAEKALALRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S     +         AIE+ +L  + + A+  AA+S I++ K R A  IL+K W+ 
Sbjct: 243 LSSSKALLAEEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEA 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E+   ++KR   L  +  +  E+ ++ +++ +      +A    
Sbjct: 303 QPHPDLAHAFAEIEPNESAQERVKRFETLLRVKPDHDETRLVRAELLIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407
              +  AP      L+A IE+        +  W   AL A   P W+ +   ++ + W P
Sbjct: 363 GDLVDRAPDARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
                 +     WK P ++PEY S+        +A  A+     L     + +     V 
Sbjct: 423 TCENCASFDTLTWKRP-ETPEYHSATGAAMLPLLAARAEAGTGALTIVDPDPIDVSDDVE 481

Query: 468 SFEDSTIHPLDPHIR 482
              D T  P    ++
Sbjct: 482 IDLDDTSEPSKGDVK 496


>gi|84684559|ref|ZP_01012460.1| Uncharacterized HemY-like membrane protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667538|gb|EAQ14007.1| Uncharacterized HemY-like membrane protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 504

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 101/488 (20%), Positives = 191/488 (39%), Gaps = 17/488 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           + ++I +  +I         +      + +  G + Y       +++++   +  WILL 
Sbjct: 5   LFKIILFVVLIGAATVGATYLLETDGGIRVDIGAQEYNLGALQAVIALIVLVVTLWILLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  RF       +     +    KGY+AL  G+M++A+     A  +      +
Sbjct: 65  LAGLIVATIRFLNGDETAISRHFDRNRERKGYEALADGMMALASGEERTA--ITKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  L+  Q A        A E  + +L    TR   V  L  +    GD ++A
Sbjct: 123 RYLRRPELTNLITAQAAEMAGDRKKATEVYKRLLADERTRFVGVRGLMKQKLEEGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229
            + A KA  + P      + ++       +W  A   L +K K+         R  A+L 
Sbjct: 183 MKLAEKAFALKPQHAETGDVLLALQATQNDWHGARETLGKKVKHGALPKDVGKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  +      G+ I +   AIE+ KL  + I  S+ AA+S + Q+ KR A  +L K WKV
Sbjct: 243 LQEAKGIFQDGNSIRAREAAIEANKLSPDLIPGSVLAARSYLEQDNKRYAARVLTKTWKV 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP+IA  +  +   E    +LKR   L + + +  E+ ++++++ +     D+A    
Sbjct: 303 QPHPDIAEAFAEIEPNETPEQRLKRFKALTKEHPDHPENKMLLAELHIAAEQFDKAREAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
                  P + +  L+A IE+       +I  W   A+ A   P W+ D  + + + W P
Sbjct: 363 GDLPTTKPTQRVLTLMAAIERGLEAPDSEIRAWLAKAVVAPRGPQWVCDKCHTVHADWGP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYP--ADDLQSMLNNGKKNHLPSIKK 465
           +           W  P ++   +       +L +  P  A D + +     ++H   +  
Sbjct: 423 VCENCGAFDTLSWSEPRETDMKMPGGTRMDALLVGAPDIAPDREMVAEARAEDHEALVGG 482

Query: 466 VSSFEDST 473
               +++ 
Sbjct: 483 SDPADEAV 490


>gi|163732926|ref|ZP_02140370.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149]
 gi|161393461|gb|EDQ17786.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149]
          Length = 495

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 107/489 (21%), Positives = 191/489 (39%), Gaps = 28/489 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           ++++I +   ++ +    + +      V +      +  SP   +++        W+ L 
Sbjct: 5   LIKIILFVVAVAALALGAVYLLESEGGVQVQVMGTEFTFSPIQSVIAAAVLVFAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  RF       +     +    KG++AL  GLM++A+    +A  M   V  +
Sbjct: 65  LLSLLVACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MTKAVKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  LL  Q A        A E  + ++   ATR   V  +  +    GD ++A
Sbjct: 123 RYLNKPELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  I P    V + +++     ++WS A   L+ K K          R  A+L 
Sbjct: 183 LQLAEKAFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +       I     AIE+ KL  + I A++ AA   + QN+ R A  +L+K W+V
Sbjct: 243 LSEAKDILSDQSSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWEV 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           +PHP++A  +  +   E    ++KR + +  I  E+ E+ ++++++ +      +A    
Sbjct: 303 HPHPDLAAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
               +         L+A IE+        +  W   AL     P WI D+  ++   W P
Sbjct: 363 GDLAETDATARSVTLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHQEWGP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
                ++     WK P  S             EMA P       L  G     P  K   
Sbjct: 423 FCENCESFDTLAWKAPPLS-------------EMAMPGGVQMLPLIVGALEEKPEEKTGD 469

Query: 468 SFEDSTIHP 476
             ED+ I P
Sbjct: 470 IIEDAEIIP 478


>gi|149204332|ref|ZP_01881299.1| HemY domain protein [Roseovarius sp. TM1035]
 gi|149142217|gb|EDM30264.1| HemY domain protein [Roseovarius sp. TM1035]
          Length = 490

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 96/485 (19%), Positives = 182/485 (37%), Gaps = 15/485 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWIL--- 57
           +++  +  +++ V      +      V I         +P   ++++       W+L   
Sbjct: 6   IKIAVFIALVAGVTLGASFLLELDGGVRIVMAGVEINLTPIKAVIALGVLVFIIWLLMKL 65

Query: 58  ---LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114
              L A  +F       L     +   DKGY+AL  G++++A+    +A  M      + 
Sbjct: 66  TGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALASGEGEVA--MAQVAKAEK 123

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
                 L  L+  Q A        A E  + +L    TR   V  +  +    GD  +A 
Sbjct: 124 YLRKPALTNLITAQAAEMAGNRRKAEEVYKQLLTNEKTRFVGVRGILRQKLAEGDTETAL 183

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230
           + A  A  + P    V + ++       +W  A   LN K K          R  A+L +
Sbjct: 184 KLAKTAFALKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKYGSLPRDVHKRRDAVLAL 243

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           + + +  D+G  I +   AIE+ +L  + I A++ AA+  I Q   R A  ++ K W V 
Sbjct: 244 SEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQGNTRNALRVINKAWLVR 303

Query: 291 PHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           PHP++A  +  +   E+   +LKR  +L +++ E+ E+ ++ +++ L       A     
Sbjct: 304 PHPDLAAAFAAIEPNESPRQRLKRFAKLLKVHPENRETRLLEAELNLAAEDFPAARRALG 363

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPL 408
              ++ P      ++A IE+    +   +  W   AL A   P W+ D   ++ + W P 
Sbjct: 364 TLAEVEPDARALTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCDKCQHIHAEWAPA 423

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
                +     W+ P  SP    +      L +    +     +         +      
Sbjct: 424 CENCNSFDTLSWRAPPNSPIATPTGLEMLPLIVGALDEPNSEPVKTEDDTVPDAEIVEEE 483

Query: 469 FEDST 473
             D  
Sbjct: 484 HMDRA 488


>gi|254459948|ref|ZP_05073364.1| HemY domain protein [Rhodobacterales bacterium HTCC2083]
 gi|206676537|gb|EDZ41024.1| HemY domain protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 494

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 105/490 (21%), Positives = 188/490 (38%), Gaps = 15/490 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF------- 53
           +L+++ +  +I+ +      +        +  G   +  SP  I+  L   L        
Sbjct: 5   LLKVLVFVAIIAGLTLGAGYLMEMGGGAVVNMGGTEFSLSPLQIILGLVLLLVALWVFLK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL AV  F       L     K    KGY+AL  G+M++A+ +      M      +
Sbjct: 65  LLSLLVAVLNFINGDETALSRYFSKNRERKGYQALSEGMMALASGDGSA--AMSKAAKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E  + +++  ATR   V  +  +    GD ++A
Sbjct: 123 KYLAKPELTNLLTAQAAEMAGDRRKAEETYKKLVKDEATRFVGVRGIMKQKLAEGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A  A  + P      + +++     ++W+ A   L  K K+         R  A+L 
Sbjct: 183 LELAEHAFALKPKHEETQDILLKLQAQGQDWAGARKTLAAKLKSGSLPRDVHKRREAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +++S    D+G    +   A E+ +L  + I A++ AA+S I Q+KKR A  +L+K W V
Sbjct: 243 LSQSKGVFDEGKDTEAREAATEANRLAPDLIPAAVMAARSYIEQDKKRYAVRVLKKAWDV 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHPE+A  Y  +  E T   ++KR   L + + +  E+ ++ +++ +       A    
Sbjct: 303 QPHPELAAAYAAIEPEETPVERIKRFANLTKSHADHAETKMLNAELNIAAEDFPAARRAM 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407
              +  AP      ++A IE+    +   +  W   AL A   P W+ D   ++ + W P
Sbjct: 363 GDLVDTAPDARSLTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCDACNHIHAEWEP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     WK P  S     +      L +    D  +  + +      P     +
Sbjct: 423 VCGNCASFDTLSWKSPPVSEAVAPTGVAMLPLIVGALEDHSRVDVVDLDDIVEPEEVVDA 482

Query: 468 SFEDSTIHPL 477
                 I   
Sbjct: 483 EVVSEDIEDA 492


>gi|260429364|ref|ZP_05783341.1| HemY domain protein [Citreicella sp. SE45]
 gi|260419987|gb|EEX13240.1| HemY domain protein [Citreicella sp. SE45]
          Length = 514

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 98/499 (19%), Positives = 191/499 (38%), Gaps = 16/499 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWI---- 56
           +L++I +  V++ +      V      + IT G   +   P   +  +   + A      
Sbjct: 5   LLKIILFVAVVAALTLGAGYVMESHGGIQITAGGYEFNLGPLQSVIAVIVLVIALYVVFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A+ +F       L     +    KGY AL  G++++++    LA  M       
Sbjct: 65  LVSLLIALLKFINGDDTALSRYFDRNRERKGYHALAEGMLALSSGEGKLA--MAKAQKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              H   L  LL  Q A        A E  + ++    TR   +  +       GD ++A
Sbjct: 123 RYLHRPALTNLLTAQAAEMTGDTRKAEEVYKKLIANDETRFVGIRGMMKLKLAKGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A +A  + P    + + ++Q      +W  A   L+ K K+       + R  A+L 
Sbjct: 183 LKLAERAFALKPKHAEIQDTLLQLQAQKHDWRGARQTLSAKLKHGALPRDVYRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +   I +   AI S K   + I  +  AA+S I++ + +KA  +L+K W V
Sbjct: 243 LSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARSYIAKGEPKKAVRVLKKTWSV 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  ++ + T   ++KR   L  +     E+ ++ +++AL      +A    
Sbjct: 303 EPHPDLAAAFAEIVPDETPAERMKRFRALTSLRVNHRETRLLKAELALAAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407
              ++  P   +  ++A I +       ++  W   AL A   P W+ D   ++ + W+P
Sbjct: 363 GDLVETEPDARVLTIMAAIARGEGAGEAEVRGWLAKALVAPRGPQWVCDSCNHIHAEWVP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +           WK P +S + +        L +    D              P I   +
Sbjct: 423 ICENCGGFDTLSWKTPPQS-DAVPPGAEMLPLIVGAIDDKADEKSAAEAAAEAPEILTPN 481

Query: 468 SFEDSTIHPLDPHIRQPDD 486
              D+          + +D
Sbjct: 482 PPSDTGAAAATAPATEVED 500


>gi|254451402|ref|ZP_05064839.1| HemY domain protein [Octadecabacter antarcticus 238]
 gi|198265808|gb|EDY90078.1| HemY domain protein [Octadecabacter antarcticus 238]
          Length = 490

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 97/499 (19%), Positives = 192/499 (38%), Gaps = 28/499 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF- 59
           +++++ +   +       I++       +I  G +    S   ++  L   + +  L+F 
Sbjct: 5   LVKILVFVAAVMAATFGAIMLLEMEGSATIDIGGQAASFSVIEMVIGLIVLVASIWLVFK 64

Query: 60  ------AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  +F       +     +    KGY+AL  G+M++A+    LA  M      +
Sbjct: 65  LIGLAIATFKFLNGDETAISRYFSRNRERKGYEALSEGMMALASGEGRLA--MAKANRAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A      +L+   TR   V  +  +  + GD ++A
Sbjct: 123 KFLERPELTNLLTAQAAELAGDRKTAELTYRKLLEDDKTRFVGVRGIMKQKLQDGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229
              A KA  I P      + +++      +W  A   L  K K  +       R  A+L 
Sbjct: 183 LLLAQKAFAIKPKHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQLPRNVHRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +G  + +   AIE+ ++  + + A++ AA++ +++N  R A  +++K W V
Sbjct: 243 LSEAKDVFAEGATLEAQEAAIEANRMSPDLVPAAVMAAQAHVAKNSSRAATRVIKKAWDV 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E+   ++KR   L +++    E+ ++++++ +      +A    
Sbjct: 303 APHPDLASAFAAIAPDEDPAARVKRFSTLTKVHPNHPETRMLLAELNIAAEDFPEARRAI 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P      ++A IE+        +  W   AL A   P WI D+  ++  VW P
Sbjct: 363 TELVAKDPTARSLTIMAAIERGEGSADAVVRGWLAKALTATRGPQWICDNCQHIHPVWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +           W+ P K              E+A PA      L  G+         V 
Sbjct: 423 ICVNCSGFDTLAWREPPKG-------------EVAMPAGVEMLPLIVGQVESPSDTLDVE 469

Query: 468 SFEDSTIHPLDPHIRQPDD 486
             E   +      +   DD
Sbjct: 470 IVEAEIVEDDGAIVSSTDD 488


>gi|86136714|ref|ZP_01055292.1| HemY domain protein [Roseobacter sp. MED193]
 gi|85826038|gb|EAQ46235.1| HemY domain protein [Roseobacter sp. MED193]
          Length = 503

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 110/498 (22%), Positives = 212/498 (42%), Gaps = 24/498 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-------VILSILYFFLF 53
           +L+++ +  +++L+     I+      V IT     Y            V++  ++ FL 
Sbjct: 5   LLKILVFVALVALIAFGAGILMETAGGVQITVAGTEYTLGALQSVLALGVLVLSVWIFLK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       +     K    KGY+AL  G+M++A+    LA  +       
Sbjct: 65  LLTLLVATLKFLNGDETAMSRYFDKGRERKGYQALSDGMMALASGEGRLA--LTKASKAA 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               N  L  LL  Q A      + A E  + +L    TR   V  +  +    GD ++A
Sbjct: 123 RYLDNPQLTDLLTAQAAEMAGDTHKAAEAYKRLLSDQTTRFVGVRGIMKQKLSEGDKDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KAL + P    V + ++Q    A++W+ A   L+ K K+       + R  A+L 
Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAQAEDWAGARKTLSAKLKSGSLPRDVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S E AD+   +     AIE+ +L  + + A+  AA++ + Q KKR A  +L+K W+ 
Sbjct: 243 LSASREVADEAASLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRNAIKVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+++  +  E T   ++KR  +L  +  +  E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHVFAEVEPEETAPQRVKRFDQLARLKPQDDETRLVMAELHIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              ++ AP   +  L+A IE+    +      W   AL A   P W+  +  ++ + W P
Sbjct: 363 GDLVERAPDARVLTLMAAIEKGEGADNAVTQAWLARALTAPRGPQWLCTNCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     W+ P ++PE  S+  ++    +        S  +      +  ++   
Sbjct: 423 VCEHCTSFDTLSWQRP-ETPEVASATGVHMLPLITGATAAADSASDAVVVQDIVDVED-- 479

Query: 468 SFEDSTIHPLDPHIRQPD 485
                 I P+ P  +  D
Sbjct: 480 ------IEPVSPEGQASD 491


>gi|56698662|ref|YP_169039.1| HemY domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56680399|gb|AAV97065.1| HemY domain protein [Ruegeria pomeroyi DSS-3]
          Length = 493

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 101/495 (20%), Positives = 195/495 (39%), Gaps = 15/495 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-------VILSILYFFLF 53
           ML+++ +  +I+L+      +      V IT     Y   P        +++  ++ F  
Sbjct: 1   MLKILVFVAIIALLALGAGFLMEASGGVQITVAGTEYTLGPLQSVIGFGLLVVAVWLFFK 60

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       L     +    +GY+AL  GLM++A+    LA  M      +
Sbjct: 61  LLTLLIATLKFLNGDETALSRYFDRGRERRGYQALTEGLMALASGEGRLA--MAKAARAE 118

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E    ++   +TR   V  +  +    GD  +A
Sbjct: 119 KLLQKPELTNLLVAQAAEMTGDTKKAAETYRKLVTDQSTRFVGVRGIMKQKLAEGDDETA 178

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P      + ++     A++W+ A   L  K K        + R  A+L 
Sbjct: 179 RKLAEKALALKPRHEETQDVLLTLQTRAQDWAGARATLTSKLKTGTLPRDVYKRRDAVLA 238

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +   +   +     AIE+ +L  + I A+  AA++ I++ K + A  IL K W+V
Sbjct: 239 LSEARDLLSETASLDQQERAIEANRLSPDLIPAAAMAARAHIAKGKPKNAAKILTKAWQV 298

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +  + T   ++KR   L + + +  E+ ++++++ +      +A    
Sbjct: 299 QPHPDLAHAFAEIAPDETPAARIKRFAALAKAHPQHAETRLMMAELNIVAEDFPEARRAL 358

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +  AP    + L+A IE+    +   +  W   AL A   P W+ D+  ++ + W P
Sbjct: 359 GDLLDHAPDARAYTLMAAIERGEGASDAVVQGWLARALTAPRGPQWVCDNCQHIHAAWAP 418

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     W+ P  +     +      L +         +     +    S   V 
Sbjct: 419 VCGNCNSFDTLSWRAPQDTDAGAMTTANMLPLIVGAIEQKAPDVEEVDFETDADSDDSVE 478

Query: 468 SFEDSTIHPLDPHIR 482
                     +P  R
Sbjct: 479 GTAKEVDGANEPVSR 493


>gi|260431926|ref|ZP_05785897.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415754|gb|EEX09013.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 506

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 102/502 (20%), Positives = 212/502 (42%), Gaps = 17/502 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL-- 58
           +L+++ +  ++ L+      +      V IT        SP   +  L   +FA  L   
Sbjct: 5   LLKILVFVVIVGLLAMGAGYLMESSGGVQITALGLEITLSPLQSVIALGVLVFAVWLGLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  +F       L     +    +GY+AL  GLM++A+    +A  +      +
Sbjct: 65  LLGLLIATLKFINGDETALSRYFDRSREQRGYQALADGLMALASGEGRIA--LTKARKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  LL  Q A        A E  + ++  PATR   V  +  +    GD ++A
Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKAAETYKKLVSDPATRFVGVRGILKQKLAEGDEDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P      + +++    A++W+ A + L  K K        + R  A+L 
Sbjct: 183 RKLAEKALQLKPRHEETQDVLLKLQTKAQDWAGARSTLTAKLKAGYLPRDVYRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +  D+   +     AIE+ +L  + + A+  AA++ I++ K R A  IL+K W+ 
Sbjct: 243 LSEAKDILDESATVEQQERAIEANRLSPDLVPAAAMAARAYIAKGKPRAATKILKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  ++ + T   ++KR   L  I+ +  E+ +I +++ +      +A    
Sbjct: 303 QPHPDLAHAFAEIVPDETPEERIKRFATLTRIHPDHPETRLIRAELNIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
              ++       + L+A IE+    +   +  W   AL+A   P W+ ++ + + + W P
Sbjct: 363 GDLVEKGADARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCENCHDIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     W+ P K+PE  ++  ++    +    +D    +   +     + + + 
Sbjct: 423 VCSTCHSFDTLSWQRP-KTPEIATATGVHMLPLIVGALEDQSDEVEEAEIEDAEAPEVIE 481

Query: 468 SFEDSTIHPLDPHIRQ-PDDPG 488
              +    P +   +  P+D G
Sbjct: 482 PEPEGAAAPDEAGAKPVPEDTG 503


>gi|90421076|ref|ZP_01228979.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334711|gb|EAS48488.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 541

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 132/431 (30%), Positives = 220/431 (51%), Gaps = 8/431 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  V+      F  ++  P  V+  W  +   TS  V L  L   +FA +L+  
Sbjct: 1   MLRILAFLLVVLAAGIGFAWLADNPGSVTFVWQGQQVGTSLMVFLIGLGVLIFAVLLVVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R F   P  + +       D+GYKAL +G+++  A +  LAR+M     +      E 
Sbjct: 61  LVRAFFKTPGAIGNWWSTSRRDRGYKALSSGIIAAGAGDAVLARRMTKRSDKLLGTRREP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+  L+ Q A+ E  +  A    E M + P TR  A+  L+ E+ R+GD ++A+ YA +A
Sbjct: 121 LIRFLDAQTAMIEGDHARARSAFEQMERDPETRLLALRGLFLEAERVGDESAARHYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
           + I+P  PW   AV++   LA +W  A+  L+ +      +  E  R RA+LL A+++  
Sbjct: 181 VRIAPHVPWAGGAVLESKCLAGDWDGALAILDAQKNTRLVDRDESKRMRAVLLTAKAMTL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           +++ D   +    +E+ KL  +   A++ AA++L      R+   +LE  W   PHP+IA
Sbjct: 241 SER-DPAGAKTAGLEAQKLAPDLPPAALVAAEALFRLGDLRRGSKVLETSWISQPHPDIA 299

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y H    ++   +LKRA +L  ++    E+ + +++ AL+ G  D A   AM A    
Sbjct: 300 EAYVHARPGDSPEDRLKRARKLHGLHSG-AEAEMSLARAALDAGEFDLARKSAMAAADAE 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A +    ++  W   A+ A  DP W + DG +S  W P+SP++  L
Sbjct: 359 PRESTYLLLADIEEAQTGEVGRVREWLGRAIRAPRDPAWTA-DGVVSRNWAPISPVTGRL 417

Query: 416 CYFEWKIPTKS 426
             FEWK+P + 
Sbjct: 418 DAFEWKVPVER 428


>gi|146278943|ref|YP_001169102.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145557184|gb|ABP71797.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 482

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 99/480 (20%), Positives = 191/480 (39%), Gaps = 17/480 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           +++++ +  ++  +     ++      + +  GN      P   +++ L      W+ L 
Sbjct: 5   LIKILIFVALVVGLTFGASMLMESGGALRLAVGNLELNLGPLQAVIAALLLIFTVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                FAV RF       +     +    KG +AL  G+M++AA    +A  M      +
Sbjct: 65  IMGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRMA--MSRASKAR 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  +  LL  Q A        A E  +++LQ   T+   +  L  +    GD  +A
Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLQDERTKFVGIRGLLKQKLDEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A KA +I+P      + +++      +WS A + L  K K+       + R  A+L 
Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADRHDWSGARSTLTAKMKSGALPKAVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K W+ 
Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +   E  V +LKR   L  IN +  ES ++ ++++L       A    
Sbjct: 303 EPHPDLAAAFAEIEPNETPVERLKRFRTLTSINPDHEESRLLTAELSLAAEDFPAARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P +    ++A +E+    +   +  W   AL A   P W  D+   + + W P
Sbjct: 363 GDIVSRHPTQRSLTIMAAVERGEGGDEAVVRGWLARALSAPRGPQWCCDNCQTVHANWAP 422

Query: 408 LSPISKTLCYFEWKIPTK--SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
           +           W+ PT+  +P    +E +   +     A       +   +  +    K
Sbjct: 423 ICDNCGGFDTLSWREPTRKSTPSATGTELLPLIVGAPAAAQAAAVDDDVIDEKAVEPASK 482


>gi|126734495|ref|ZP_01750242.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2]
 gi|126717361|gb|EBA14225.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2]
          Length = 457

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 89/450 (19%), Positives = 167/450 (37%), Gaps = 15/450 (3%)

Query: 22  SHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-------WILLFAVSRFFLSCPAMLFH 74
                  ++    + +  S   ++  L   + A         L  A  +F       +  
Sbjct: 1   MEVDGGATVDVAGQEFTLSTLEMVFALGALVVAVWLGLKLLALCVATFKFLNGDETAISR 60

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
              +    KGY+AL  G+M++A+    LA  M              L  LL  Q A    
Sbjct: 61  YFDRNRERKGYEALSEGMMALASGEGHLA--MTKAARADKYLQQPQLTNLLTAQAAEMTG 118

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A E  + +L    TR   V  +  +    GD ++A   A KA  + P      + +
Sbjct: 119 DRKTAEETYKKLLSDDKTRFVGVRGIMKQKLSDGDTDTAMALAQKAFALKPKHEETQDVL 178

Query: 195 VQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++      +W+ A   L  K K+         R  A+L ++ + +  D+G  I +   AI
Sbjct: 179 LRLQAEKSDWAGARKTLGAKLKSGSLPRDVHKRRDAVLALSEARDILDEGKTIEAREAAI 238

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG- 309
           E+ +L  + I A+I AA+  I +   R A  +L K+W   PHP+IA  +  +  + +   
Sbjct: 239 EANRLSPDLIPAAIMAARGYIGEGNARYATRVLTKVWNAQPHPDIAAAFAEIAPDESSDE 298

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           +LKR  +L +   +  E+ ++++++ +       A       ++  P      ++A IE+
Sbjct: 299 RLKRFTKLTKTTADHPETKMLMAELHIAAEDFPAAKRALGELVEKDPTARNLTIMAAIER 358

Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYFEWKIPTKSPE 428
               +   +  W   AL A   P WI  +  ++   W        +     WK P  S  
Sbjct: 359 GEGADDSVVRGWLTKALTAPRGPQWICGNCQHIHPTWAATCDNCGSFDTLAWKTPPASDV 418

Query: 429 YISSENINFSLEMAYPADDLQSMLNNGKKN 458
            + +      L +    +         ++ 
Sbjct: 419 AMPAGTEMLPLIVGQTKEAQLPSTEVVEEA 448


>gi|222087479|ref|YP_002546016.1| hypothetical protein Arad_4359 [Agrobacterium radiobacter K84]
 gi|221724927|gb|ACM28083.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 532

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 173/519 (33%), Positives = 264/519 (50%), Gaps = 31/519 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  ++  +   F  ++  P D+S+ W  +LY+T   V   IL   + A ++++ 
Sbjct: 1   MIRLLIFALLVLALGYGFSWLADRPGDLSLVWEGQLYQTKLIVAAGILIALVAATMIVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 61  FIRLIWNSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARTRGLIRADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A +K E+M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 121 LINLLEAQAALIEGKHDEARQKFELMANDPETRELGLRGLYLEAKRLGANEAARQYAEKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L+Q+K     + +  NR RA+LL AR+ + 
Sbjct: 181 ADHAPYLPWAAQATLEYRSQAGNWDDAIKLLDQQKVAHVVDKETANRQRAVLLTARANDK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D   +  DA+ +LKL  + + A++ AAK+L  ++K RKA  +LE++WK  PHPEI 
Sbjct: 241 LE-SDPAGARDDALAALKLSADFVPAALTAAKALFREDKVRKAASMLEQVWKAKPHPEIG 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    S ++V  +LKRA RLE I   +VE+L++ +K AL+     +A AKA  A +I 
Sbjct: 300 KAYVRARSGDSVTDRLKRAERLEAIRPNNVEALLVTAKAALDAHDFAKARAKAEAAARID 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  FLLLA IE+A +++  ++ +W   AL A  DP W++ DG++S  WLPLSPI+  L
Sbjct: 360 AREGAFLLLADIEEAETNDQGRVRHWMAQALRAPRDPAWVA-DGFVSDKWLPLSPITGRL 418

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST-- 473
             FEWK P    E    E    S++ A  +                +   V+S    T  
Sbjct: 419 DAFEWKAPFGQIEGPLEEGTAVSVDAALKSLPPMREATPATAAAKATSPIVASPTTRTSV 478

Query: 474 ----------------------IHPLDPHIRQPDDPGIK 490
                                   P       PDDPG+K
Sbjct: 479 IELEPIAAKPATAAAATEPAKEPEPRPFFGGAPDDPGVK 517


>gi|319404858|emb|CBI78459.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 514

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 132/480 (27%), Positives = 214/480 (44%), Gaps = 10/480 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++   F   ++    + IT+    +  S   I+S +   L   + L+ 
Sbjct: 1   MIRIFIYIFVVCVIGAVFSWGANNNSFLVITFLQMRFTVSLLTIISGIVILLMVLVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+     R  + G KAL  GL++  A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPRTLYSFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYFIKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +  +T+   +Y L+ E+      + AQ YA +A
Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDESTKLAGLYGLFREAMNTKAYDVAQHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENA 237
           LD+SP   W  + V+ +     +W++A+    + ++           R           A
Sbjct: 181 LDLSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCTSERKYTHALLLSGLA 240

Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
               +  +  +    +++ KL  + +  ++     L    + RKA+ I+ K W+ NPHP+
Sbjct: 241 LHLTETQLAGARKAILKAHKLMPDFVPITVLMVDILYQLKEVRKADKIIIKAWQENPHPD 300

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y     E+ VG+LKRA  L   NKE  ES  IV+K AL+ G ++ A   A  A+  
Sbjct: 301 LGALYLR-REESAVGRLKRAKTLAFYNKEIFESAFIVAKAALDAGELELAREYAQKALTY 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
            PR+ ++LLLA IE+A  +       W   AL A PDP W   DG   S WL +SPIS  
Sbjct: 360 HPRESVYLLLADIEEAKGNGQG-SRQWLSLALRAEPDPAWAC-DGSFFSSWLIVSPISGR 417

Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
           L   EWK+P + SP  +  +N+    E      D + ++ N       SI      +  T
Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKGVIKNKSFEEKSSIGPDFLLKSRT 477


>gi|86359488|ref|YP_471380.1| hypothetical protein RHE_CH03907 [Rhizobium etli CFN 42]
 gi|86283590|gb|ABC92653.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 535

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 165/523 (31%), Positives = 260/523 (49%), Gaps = 34/523 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +   + L+   F   +  P D+S+ W  ++Y+T   V +S +   + A ++++ 
Sbjct: 1   MIRLVVFALFVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 61  FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLLAVLLTARAAEK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +  DA+++LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 241 LE-GNPAGARDDALQALKLAVDLVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIG 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y      ++T+ +LKRA RLE +   +VESL++V++ AL+     +A +KA  A +I 
Sbjct: 300 QTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARSKAEAAARIE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  +
Sbjct: 360 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 418

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPA----------------------DDLQSMLN 453
             FEWK P    E    +    +                             +   ++  
Sbjct: 419 DAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESPVNDHRIIELERAATIAE 478

Query: 454 NGKKNHLPSIKKVSSFEDSTIHPLDPHIRQ-----PDDPGIKE 491
             +    P+  K      S   P     +      PDDPG+++
Sbjct: 479 AVRPAPAPAKPKSVESTASDKAPAPNEAKPFFGGLPDDPGVRD 521


>gi|221640998|ref|YP_002527260.1| HemY domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221161779|gb|ACM02759.1| HemY domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 478

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 97/467 (20%), Positives = 189/467 (40%), Gaps = 15/467 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           M++++ +  ++  +      +      + +  G+      P   +++ L   L  W+ L 
Sbjct: 1   MIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 60

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                FAV RF       +     +    KG +AL  G+M++AA     A  M      +
Sbjct: 61  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 118

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  +  LL  Q A        A E  +++L+   TR   V  L  +    GD  +A
Sbjct: 119 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTETA 178

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A KA +I+P      + +++      +WS A + L+ K K+       + R  A+L 
Sbjct: 179 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 238

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K W+ 
Sbjct: 239 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 298

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L       A    
Sbjct: 299 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 358

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P +    ++A +E+    +   +  W   AL A   P W  D+   + + W P
Sbjct: 359 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 418

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454
           +           W+ PT+     ++      L +  PA      ++ 
Sbjct: 419 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 465


>gi|319407818|emb|CBI81471.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
          Length = 514

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 129/480 (26%), Positives = 212/480 (44%), Gaps = 10/480 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  Y FV+ ++   F   ++    + IT+    +  S   I+S L   L   + L+ 
Sbjct: 1   MIRIFIYIFVVCVIGAIFSWGANNNSFLVITFLQMRFTVSLLTIISGLVILLMVLVFLWK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   S P  L+     R  + G KAL  GL++  A +   A+KM     +      E 
Sbjct: 61  FFRIIFSIPRTLYRFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYLIKDYEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LL  QI   ++    A    E M +   T+   +Y L+ E+      + A+ YA +A
Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDEPTKLAGLYGLFREAMNTKAYDVAKHYAEEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENA 237
           L +SP   W  + V+ +     +W++A+    + ++           R           A
Sbjct: 181 LALSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCNSERNYTHALLLSGLA 240

Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
               +  +  +    +++ KL  + +  ++     L    + RKA+ ++ K W+ NPHP+
Sbjct: 241 LHLTETKLAEARKAILKAHKLMPDFVPITVIMIDILYQLKEVRKADKMIIKAWQENPHPD 300

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y     E+ VG+LKRA  L   NK+  ES  IV+K AL+ G ++ A   A  A+  
Sbjct: 301 LGALYLR-REESAVGRLKRAKALASYNKDIFESAFIVAKAALDAGELELAREYAQKALTY 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
            PR+ ++LLLA IE+A  +       W   AL A PDP W   DG   S WL +SPIS  
Sbjct: 360 HPRESVYLLLADIEEAQGNGQGN-RQWLSLALRAEPDPAWAC-DGSFFSSWLIVSPISGR 417

Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
           L   EWK+P + SP  +  +N+    E      D + ++ N       SI      +  T
Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKEVIKNKSFEEKSSIGPDFLLKSRT 477


>gi|77462046|ref|YP_351550.1| hypothetical protein RSP_1508 [Rhodobacter sphaeroides 2.4.1]
 gi|77386464|gb|ABA77649.1| Uncharacterized HemY-like membrane protein [Rhodobacter sphaeroides
           2.4.1]
          Length = 482

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 96/467 (20%), Positives = 190/467 (40%), Gaps = 15/467 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           +++++ +  ++  +      +      + +  G+      P   +++ L   L  W+ L 
Sbjct: 5   LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                FAV RF       +     +    KG +AL  G+M++AA     A  M      +
Sbjct: 65  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  +  LL  Q A        A E  +++L+   TR   V  L  +    GD ++A
Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A KA +I+P      + +++      +WS A + L+ K K+       + R  A+L 
Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K W+ 
Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L       A    
Sbjct: 303 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P +    ++A +E+    +   +  W   AL A   P W  D+   + + W P
Sbjct: 363 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454
           +           W+ PT+     ++      L +  PA      ++ 
Sbjct: 423 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 469


>gi|126460935|ref|YP_001042049.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126102599|gb|ABN75277.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 482

 Score =  458 bits (1179), Expect = e-126,   Method: Composition-based stats.
 Identities = 96/467 (20%), Positives = 189/467 (40%), Gaps = 15/467 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           +++++ +  ++  +      +      + +  G+      P   +++ L   L  W+ L 
Sbjct: 5   LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                FAV RF       +     +    KG +AL  G+M++AA     A  M      +
Sbjct: 65  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  +  LL  Q A        A E  +++L+   TR   V  L  +    GD  +A
Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A KA +I+P      + +++      +WS A + L+ K K+       + R  A+L 
Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K W+ 
Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L       A    
Sbjct: 303 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P +    ++A +E+    +   +  W   AL A   P W  D+   + + W P
Sbjct: 363 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454
           +           W+ PT+     ++      L +  PA      ++ 
Sbjct: 423 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 469


>gi|85705790|ref|ZP_01036887.1| HemY domain protein [Roseovarius sp. 217]
 gi|85669780|gb|EAQ24644.1| HemY domain protein [Roseovarius sp. 217]
          Length = 490

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 96/482 (19%), Positives = 180/482 (37%), Gaps = 15/482 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL--- 58
           +++  +  +++ V      +      V I         +P   +  L   +FA  LL   
Sbjct: 6   IKIAVFIALVAGVTLGASFLLELDGGVRIVMAGVEINLTPIKAVIALGVLVFAIWLLMKL 65

Query: 59  ----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114
                A  +F       L     +   DKGY+AL  G++++A+    +A  M      + 
Sbjct: 66  TGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALASGEGEVA--MAQAAKAEK 123

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
                 L  L+  Q A      + A E  + +L    TR   V  +  +    GD  +A 
Sbjct: 124 YLRKPALTNLITAQAAEMAGNRSKAEEVYKRLLTNEKTRFVGVRGILRQKLAEGDTETAL 183

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230
           + A  A  + P    V + ++       +W  A   LN K K          R  A+L +
Sbjct: 184 KLAKTAFTLKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKYGNLPRDVHKRRDAVLAL 243

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           + + +  D+G  I +   AIE+ +L  + I A++ AA+  I Q   R A  ++ K W V+
Sbjct: 244 SEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQGNTRNALRVINKAWLVH 303

Query: 291 PHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           PHP +A ++  +  + T   +LKR  +L +++ +  E+ ++ +++ L       A     
Sbjct: 304 PHPNLAAVFAAIEPDETPNQRLKRFAKLLKVHPDHRETRLLAAELNLAAEDFPAARRALG 363

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPL 408
              ++ P      ++A IE+        +  W   AL A   P W+ D   ++   W P 
Sbjct: 364 NLAEVEPDARAVTIMAAIERGEGAPDAVVKGWLARALSAPRGPQWVCDKCQHIHVEWSPT 423

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
                +     W+ P  S     +      L +    +  +          + +      
Sbjct: 424 CENCNSFDTLSWRAPPNSTIATPTGLEMLPLIVGALDEPHKEAAKEMDDTVVDAEIVAEE 483

Query: 469 FE 470
            E
Sbjct: 484 DE 485


>gi|126738548|ref|ZP_01754253.1| HemY domain protein [Roseobacter sp. SK209-2-6]
 gi|126720347|gb|EBA17053.1| HemY domain protein [Roseobacter sp. SK209-2-6]
          Length = 503

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 114/497 (22%), Positives = 205/497 (41%), Gaps = 19/497 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +L+++ +F +I++     I++      V IT     Y  S    +L++    L  W+   
Sbjct: 5   LLKVLVFFAIIAVAAFGVIVLGETAGGVQITVAGTEYTLSALQSVLALGVLVLAVWVFFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       +     K    KGY+AL  GLM++A+    LA  M       
Sbjct: 65  VLALLVATLKFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKASRAA 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A +  + +L    TR   V  +  +    GD ++A
Sbjct: 123 RYLEKPELTDLLTAQAAEMAGDTGKAADAYKRLLSNQNTRFVGVRGIMKQKLSEGDSDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KAL + P    V + ++Q    A++W+ A   L+ K K        + R  A+L 
Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAKAEDWAGARKTLSTKLKTGTLPRDVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S E A     +     AIE+ +L  + + A+  AA++ + Q KKR A  IL+K W  
Sbjct: 243 LSASKEVAADTSSLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRAAIKILKKAWSA 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E+   ++KR  +L  +N ++ E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEVEPNESASERVKRFDQLARLNPQNDETRLVMAELLIVAEDFPEARRVL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              ++ AP      L+A IE+        I  W   AL A   P W+ ++  ++ + W P
Sbjct: 363 GDLVERAPDARSLTLMAAIEKGEGAGDAVIQGWLARALSAPRGPQWLCENCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     WK P ++PE  S+   +    +       +          +P  + VS
Sbjct: 423 VCEHCTSFDTLSWKRP-ETPELNSATAAHMLPLITGAGASTEVA---QMVEDVPEAEVVS 478

Query: 468 SFEDSTIHPLDPHIRQP 484
                     D     P
Sbjct: 479 DVSGEAEESADAPEAAP 495


>gi|332559973|ref|ZP_08414295.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|332277685|gb|EGJ23000.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 482

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 96/467 (20%), Positives = 189/467 (40%), Gaps = 15/467 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58
           +++++ +  ++  +      +      + +  G+      P   +++ L   L  W+ L 
Sbjct: 5   LIKILIFVALVVALTFGASELMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                FAV RF       +     +    KG +AL  G+M++AA     A  M      +
Sbjct: 65  IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  +  LL  Q A        A E  +++L+   TR   V  L  +    GD  +A
Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A KA +I+P      + +++      +WS A + L+ K K+       + R  A+L 
Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  + +  D+   I +   AI + K   + I A+  AA+S ++Q  K+ A  +L+K W+ 
Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +LKR   L  I+ +  E+ +++++++L       A    
Sbjct: 303 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              +   P +    ++A +E+    +   +  W   AL A   P W  D+   + + W P
Sbjct: 363 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454
           +           W+ PT+     ++      L +  PA      ++ 
Sbjct: 423 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 469


>gi|254476677|ref|ZP_05090063.1| HemY domain protein [Ruegeria sp. R11]
 gi|214030920|gb|EEB71755.1| HemY domain protein [Ruegeria sp. R11]
          Length = 496

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 107/489 (21%), Positives = 204/489 (41%), Gaps = 21/489 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56
           +L+++ +  +++++     +++     V IT     Y  S    ++++       W+   
Sbjct: 5   LLKILVFVAIVAVLAFGASLLTETAGGVQITVAGTEYTLSALQSVIALAVLVFAVWLGFK 64

Query: 57  ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  RF       L     K    KGY+AL  G+M++A+    LA  M      +
Sbjct: 65  VLSLLIATLRFLNGDETALSRYWDKGRERKGYQALSDGMMALASGEGRLA--MAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +N  L  LL  Q A        A E  + ++   +TR   V  +  +    GD  +A
Sbjct: 123 KYLNNPELTDLLTAQAAEMAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILL 229
           ++ A KAL + P    V + ++     A++W+ A   L  K K        + R  A+L 
Sbjct: 183 RQLAEKALALRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S    + G  +     AIE+ +L  + + A+  AA++ +S+ KKR A  +L+K W+ 
Sbjct: 243 LSASKAIVEDGATVEQQEQAIEANRLSPDLVPAAAMAARTYLSRGKKRNAIRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +   E+   ++KR ++L  +  +  E+ +I++++ +      +A    
Sbjct: 303 QPHPDLAQAFAEVEPGESAQERVKRFVQLSRLAPQHDETRLIMAELNIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407
              ++ AP      L+A IE+        I  W   AL A   P W+ D   ++ + W P
Sbjct: 363 GDLVERAPDARALTLMAAIEKGEGAPDAVIQGWLTRALSAPRGPQWVCDKCNHIHADWAP 422

Query: 408 LSPISKTLCYFEWKIP----TKSPEYISSENINFSLEMAYPAD--DLQSMLNNGKKNHLP 461
           +     +     W  P       P+ +         + A+ AD  D++ + ++       
Sbjct: 423 VCENCASFDTLSWTRPEAPHVMGPQVLPLLTGKPQADEAHGADIADVELLEDDQTDAEDD 482

Query: 462 SIKKVSSFE 470
           S       E
Sbjct: 483 SATVSEDAE 491


>gi|150398166|ref|YP_001328633.1| HemY domain-containing protein [Sinorhizobium medicae WSM419]
 gi|150029681|gb|ABR61798.1| HemY domain protein [Sinorhizobium medicae WSM419]
          Length = 551

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 169/539 (31%), Positives = 272/539 (50%), Gaps = 50/539 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  ++  +   F  ++  P ++S+ W  +L   S     S+L     A ++   
Sbjct: 1   MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLLRAASLLISVFAAVLIAVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   S P  +      R  D+GY+AL TGL++  A +  LARKM +      +   E 
Sbjct: 61  LLRTIWSSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDANLARKMTARTRSLISSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E +Y+ A +K E+M   P TRE  +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIHLLEAQTSLIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARHYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            + +P  PW T A +     A++W  AI  L+Q +       KE +R +A+LL AR++E 
Sbjct: 181 AEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAANVLERKEADRKKAVLLTARAMEQ 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D  ++  DA  +LKL D+ + A++ AAK+L  ++  RK   ILEK+WK++PHPEIA
Sbjct: 241 LE-ADPKSARDDARAALKLDDSLVPAALVAAKALFREDNLRKGASILEKMWKLDPHPEIA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y      ++ + +LKRA RLE +   +  SL  V++ ALE   +  A  KA  A +I 
Sbjct: 300 RLYVRARGGDSALDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARTKAEAAARID 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLLLA IE+A++ +  +I YW   AL +  DP W + DG  S  WLP+SP++  L
Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRYWMSQALRSPRDPAWTA-DGVTSPSWLPVSPVTGRL 418

Query: 416 CYFEWKIPTKS-------------------------PEYISSENINFSLEMAYPADDLQS 450
             FEWK P                            P   +      +++ A PA+ +++
Sbjct: 419 DAFEWKAPPARLPAATEEGYLNPDAAIRSLPPVATVPRPATEPETESAVDAAPPAERVEA 478

Query: 451 ------------------MLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491
                               +  +K  +P++   +  +DS   P     R PDDPG++E
Sbjct: 479 EPEKAITVPDPNETVAPPAGDPNRKEPVPAVASPAKGKDSEEAPDPFFGRPPDDPGVRE 537


>gi|126724569|ref|ZP_01740412.1| HemY domain protein [Rhodobacterales bacterium HTCC2150]
 gi|126705733|gb|EBA04823.1| HemY domain protein [Rhodobacterales bacterium HTCC2150]
          Length = 488

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 91/473 (19%), Positives = 177/473 (37%), Gaps = 15/473 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF------- 53
           +++++ +   I  +      ++     + I +GN  Y   P   +  L   +        
Sbjct: 5   LIKILFFVVAIIALAFGVNYLTSMSGGIQIAFGNTEYTLGPLQSIVALILLVLTLYLILK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
               + A  RF       +          KGY+AL  GLM++A+    +A  +      +
Sbjct: 65  LIGFVLAFVRFLNGDETAISRYFSANRERKGYQALSDGLMALASGEGRVA--LSQAERAR 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  L+  Q A  E     A +    +L+   TR   V  +  +    GD  +A
Sbjct: 123 RLLNKPELTNLISAQAAEMEGDTKKAKDIYVELLKDERTRFVGVRGIMKQKLAEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KA D+ P      + ++Q     ++W+ A   LN K  N         R  A+L 
Sbjct: 183 KKLAEKAFDLKPKHNETGDVLLQLQAENEDWAGARKTLNTKVSNGVLPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +       + +   AIE+ +L  + I A++ AAK+ + Q K R A  +L   WK 
Sbjct: 243 LSEARDIFANAGAVEAQVAAIEANRLSPDLIPAAVMAAKAYMEQEKPRYATRVLIAAWKS 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  ++  E T  ++KR   L + + +  E+ ++++++ +       A    
Sbjct: 303 QPHPDLAAGFADIVPTETTKARIKRFAGLIKSDPDHAEARLLMAELHIADEDFAGARKAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407
                         ++A IE+    +   +  W   AL A   P W  D   ++ S W  
Sbjct: 363 GGLNDDYLTSRSLTIMAAIERGEGSDDAIVRGWLTKALGASRGPQWTCDKCNHVHSNWTA 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL 460
           +           WK P +    +        L +           +  +   +
Sbjct: 423 ICDRCSGFDTLAWKTPAEGELSMHGSTQMLPLIVGQAKSTEPLEDSAKEDATI 475


>gi|49476261|ref|YP_034302.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1]
 gi|49239069|emb|CAF28372.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1]
          Length = 517

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 139/509 (27%), Positives = 241/509 (47%), Gaps = 22/509 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ Y FV+ L   +F  V++Y + + IT+ +  +  S    LS+L  FL    LL+ 
Sbjct: 1   MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +     S P +L +  +KR    GY+AL  G +++ A +  +A+KM + V +    + E 
Sbjct: 61  LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q    +     A    E M +   T+   +Y L+ E+ +     +AQ+YA +A
Sbjct: 121 LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233
             +SP   W  +AV+ +      W +A+    Q +K        A E    +A+LL  ++
Sbjct: 181 QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA 240

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L    +   + +    +++ KL  + I  ++ AA  L   N+ RKA+ ++   W+  PHP
Sbjct: 241 LHLL-RTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHP 299

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++  +Y     E  VG+LK+A  L   NK++ ES  +++K AL+ G    A  +A  A++
Sbjct: 300 DLGALYLE-REEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQ 358

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
              R+ ++LLLA IE+A  +N   +  W   AL A  DP+W+  DG + S W  +SPIS 
Sbjct: 359 YHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWAVISPISG 417

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
            L  FEWK P + P        +  +      +D +  ++         ++K  S +   
Sbjct: 418 RLGCFEWKAPPRMPPLTL--EADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDL 475

Query: 474 IHPLDPHIR----------QPDDPGIKEQ 492
           +H      +            DDPG+K +
Sbjct: 476 LHHAQIDKQDTEESSQIRLNVDDPGVKIE 504


>gi|89067497|ref|ZP_01155010.1| HemY domain protein [Oceanicola granulosus HTCC2516]
 gi|89047066|gb|EAR53120.1| HemY domain protein [Oceanicola granulosus HTCC2516]
          Length = 495

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 99/479 (20%), Positives = 199/479 (41%), Gaps = 15/479 (3%)

Query: 7   YFFVISLVICSFIIVSHYPEDVSITWGNRLYR-TSPFVILSILYFFLFAWI------LLF 59
           +  V+  +    + + +     ++T        T+  + ++ +   L  W+      LL 
Sbjct: 11  FVVVVMAIAYGAVWLMNVEGGATVTMAGYEVTLTTLQLAIAFVVLVLAIWLFFKLLGLLS 70

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           A+  F       +    +KR   +G++AL  G+M++AA +  LA  +             
Sbjct: 71  ALFHFLNGDETAVSRYFNKRTERRGFEALSEGMMALAAGDGQLA--LVKAEKADRYLDRP 128

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL+ Q A       +A +  +++LQ   TR   V  L  +    G+  +A + A +
Sbjct: 129 ELTNLLKAQAAERAGDRRVAEDTYKLLLQDDRTRFVGVQGLMRQKLEAGETETAMQLAQR 188

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLE 235
           A  +SP    V+  +++     ++W+ A   L  + K          R  A+L ++ + E
Sbjct: 189 AFALSPKNDEVSNTLLRLQAEHEDWAGARQTLGARLKTGAIPRDVHRRRDAVLALSEARE 248

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              +G   A++ +AIE+ +L  + I A+I AA+  I QN  R A  +L+K W+  PHP++
Sbjct: 249 KLLEGKDAAAHEEAIEANRLSPDLIPAAIMAARGYIDQNNGRSAARVLKKAWEAQPHPDL 308

Query: 296 ANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A  +  +  +     ++KR   L  ++ +  E+ ++++++ +      +A       ++ 
Sbjct: 309 AAAFADIKPDEGPAERIKRFRDLTRVHPDHSETRMLLAELHVAAEDFPEAKRALGDLVET 368

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLPLSPISK 413
            P   +  L+A IE+    +   +  W   AL A     WI D+ + +++ W P+ P  K
Sbjct: 369 DPTARVLTLMAAIERGAGADDTVVRGWLTKALTAPRGDQWICDNCHNVAAHWAPVCPNCK 428

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
           +     WK P +S   +        L +    D        G      +    +S +  
Sbjct: 429 SFDTLAWKRPPQSEVAMPRGVEMLPLIVGRIEDRSAETAAPGSVPPEEAKVVDASADGD 487


>gi|99082666|ref|YP_614820.1| HemY-like [Ruegeria sp. TM1040]
 gi|99038946|gb|ABF65558.1| HemY-like protein [Ruegeria sp. TM1040]
          Length = 494

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 104/491 (21%), Positives = 194/491 (39%), Gaps = 16/491 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSI-------LYFFLF 53
           +L+++ +  +++L+     ++      V IT     Y       +          + F  
Sbjct: 5   LLKILVFVAIVALLAFGAGVLMETAGGVQITVAGTEYTLGALQSVMALLALMLLTWLFFK 64

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  RF       L     K    +GY+AL   LM++A      A  +      +
Sbjct: 65  LLSLLLATLRFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LTKAAKAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               +  L  L+  Q A      + A E  + +L   +TR   V  +  +    GD  +A
Sbjct: 123 RYLQDPALTDLVVAQAAEMAGDTHKAAEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P    V + +++    A++W+ A   L  K K      + + R  A+L 
Sbjct: 183 RQLAEKALALRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S     +         AIE+ +L  + + A+  AA+S I++ K R A  IL+K W+ 
Sbjct: 243 LSSSKALLAEEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEA 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E    ++KR   L  +  +  E+ ++ +++ +      +A    
Sbjct: 303 QPHPDLAHAFAEIEPNETAEARVKRFEPLLRLKPDHDETRLVRAELLIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407
              +  AP      L+A IE+        +  W   AL A   P W+ +   ++ + W P
Sbjct: 363 GDLVDRAPDARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
                 +     WK P ++PEY S+        +A   DD  +            +++  
Sbjct: 423 TCENCASFDTLTWKRP-ETPEYHSATGAAMLPLLAGRQDDNGTGALTIIDPEPSDVREDG 481

Query: 468 SFEDSTIHPLD 478
                T +P D
Sbjct: 482 DQTQRTDNPDD 492


>gi|116254227|ref|YP_770065.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258875|emb|CAK09983.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 542

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 155/463 (33%), Positives = 239/463 (51%), Gaps = 7/463 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++RL+ +   + L+   F  ++  P D+S+ W  ++Y+T   V  S +   + A ++ + 
Sbjct: 2   LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALVAAVMIAWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 62  FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +   +  DA+++LKL  + I A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 242 LE-SNPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y      ++T+ +LKRA RLE     +VESL++V++ AL+     +A AKA  A  + 
Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAAHMQ 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  L
Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458
             FEWK P    E    +    +                 +  
Sbjct: 420 DAFEWKAPFGQIEGALEDGSAPASIETALKTLPPLRDVRPESP 462


>gi|254465019|ref|ZP_05078430.1| HemY domain protein [Rhodobacterales bacterium Y4I]
 gi|206685927|gb|EDZ46409.1| HemY domain protein [Rhodobacterales bacterium Y4I]
          Length = 498

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 104/498 (20%), Positives = 205/498 (41%), Gaps = 17/498 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL-- 58
           +L+++ +  +++L+     ++      V IT     Y  S    +  L   + A  L   
Sbjct: 5   LLKILVFVAIVALLAFGAGLLMETAGGVQITVAGTEYTLSALQSVIALGVLVVAVWLFLK 64

Query: 59  -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                 A  RF       L     K    KGY+AL  GLM++A+    L   +      +
Sbjct: 65  LLSLLVATLRFLNGDETALSRYWDKGRERKGYRALSEGLMALASGEGRL--ALAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               N  L  LL  Q A      + A +  + +L    TR   V  +  +    GD ++A
Sbjct: 123 KYLQNPELTDLLVAQAAEMSGDTHKAADAYKRLLSNQQTRFVGVRGIMKQKLSQGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
           ++ A KAL + P    V + +++    A++W+ A   L+ K K        + R  A+L 
Sbjct: 183 RQLAEKALALRPKHEEVQDTLLRLQAQAEDWAGARKTLSTKLKTGTLPRDVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S    D+   I     AIE+ +L  + + A+  AA++ +++ KKR A  +L+K W+ 
Sbjct: 243 LSASKGVIDENATIEQREQAIEANRLSPDLVPAAAMAARAYLAKGKKRPAVRLLKKTWQS 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E+   ++ R  +L  +N +  E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEVEPDESAAERVARFDQLARLNPQDDETRLVMAELNIVAEDFPEARRWL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
               + AP      L+A IE+    +   +  W   AL +   P W+  +  ++   W P
Sbjct: 363 SDLTERAPDARALTLMAAIERGEGADDKVVQGWLTRALTSPRGPQWVCSNCNHIHVEWEP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     WK P ++PE ++S    + L +     D +              + V 
Sbjct: 423 VCEHCTSFDTLSWKRP-ETPE-VASHAAAYMLPLITGVLDSKQSDTVDDAEEADLAEPVP 480

Query: 468 SFEDSTIHPLDPHIRQPD 485
             +          +++P+
Sbjct: 481 DADGDVEPEQQDAVKEPN 498


>gi|241206707|ref|YP_002977803.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860597|gb|ACS58264.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 544

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 156/463 (33%), Positives = 240/463 (51%), Gaps = 7/463 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++RL+ +   + L+   F  ++  P D+S+ W  R+Y+T   V  S +   + A ++ + 
Sbjct: 2   LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGRIYQTKLIVAASAIIALVAAVMIAWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 62  FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +   +  DA+++LKL  + I A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 242 LE-SNPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y      ++T+ +LKRA RLE     +VESL++V++ AL+     +A AKA  A ++ 
Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  L
Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458
             FEWK P    E    +    +                 +  
Sbjct: 420 DAFEWKAPFGQIEGALEDGSAPASIETALKTLPPLRDVRPESP 462


>gi|163738035|ref|ZP_02145451.1| HemY-like protein [Phaeobacter gallaeciensis BS107]
 gi|161388651|gb|EDQ13004.1| HemY-like protein [Phaeobacter gallaeciensis BS107]
          Length = 507

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 101/494 (20%), Positives = 201/494 (40%), Gaps = 15/494 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +L+++ +  +++++     +++     V IT     Y  S    +  L   +F   +LF 
Sbjct: 5   LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVVWVLFK 64

Query: 61  VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           +        RF       +     K    KGY+AL  GLM++A+    LA  M      +
Sbjct: 65  LLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E  + ++   +TR   V  +  +    GD ++A
Sbjct: 123 KYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILL 229
           ++ A KAL + P    V + ++     A++W+ A   L  K K        + R  A+L 
Sbjct: 183 RQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S     +G  +     AIE+ +L  + + A+  AA++ ++++KKR A  +L+K W+ 
Sbjct: 243 LSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E    ++KR  +L  +  +  E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              ++  P      L+A IE+    +   I  W   AL+A   P W+  +  ++ + W P
Sbjct: 363 GDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     W+ P       ++      L    P        ++  +  L   +  S
Sbjct: 423 VCENCASFDTLSWRRPEAPEIVGATGAQVLPLITGTPEGAAGPDASDIPEVELLEEEDTS 482

Query: 468 SFEDSTIHPLDPHI 481
             +     P  P  
Sbjct: 483 VSDVGETLPQGPDT 496


>gi|163757398|ref|ZP_02164487.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43]
 gi|162284900|gb|EDQ35182.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43]
          Length = 631

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 243/494 (49%), Gaps = 9/494 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  ++ ++   F  ++  P D+SI W +R    S    ++++   + A ++ + 
Sbjct: 2   MIRLLFFVALVLVLGFGFAWLADRPGDLSIVWQDRRIEMSLMTAVTVMVSLVAAVMITWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P ++         D+GY+AL TGL++  A +   ARKM+       +   E 
Sbjct: 62  LIRTIWLSPRLVSRYFRANKRDRGYQALSTGLLAAGAGDAMTARKMNKRSRGLLSADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+VQ AL E + + A ++ E + + P TR   +  LY E+ R G   +A  YA KA
Sbjct: 122 LIHLLDVQTALIEGRNDDARKQFEALAEDPETRLLGLRGLYLEAQRQGATEAAHHYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236
            +++P  PW   A +       +W  A+  L+ +++       E +R +A+LL AR+ + 
Sbjct: 182 AELAPHLPWAGAAALSFRTQEGKWDEALRLLDTQRQAGTLEALEADRKKAVLLTARARDR 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D + S  DA+ +LK+      A++ A K+L+  +  RKA  ILE  WKVNPHPEIA
Sbjct: 242 LD-ADPLRSRDDALAALKVAPGFAPAAVIATKALLRNDNLRKAARILESAWKVNPHPEIA 300

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y      +    +LKRA RLE++   + ++   V++ ALE    D A  KA  + ++ 
Sbjct: 301 DAYVRARIGDTAADRLKRAERLEKLKPLNAQAYDTVARAALEARRFDLARQKAEASARLL 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + I+LLLA IE+A + +  ++ +W   A+ A  DP W + DGY+S  W P+SP++  L
Sbjct: 361 PCEGIYLLLADIEEAETGDEGRVRHWLSQAVRAPRDPAWTA-DGYVSETWEPVSPVTGKL 419

Query: 416 CYFEWKIPTKSPEYISSENINF--SLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
             FEWK+P +       +      S + A  +      +        P +          
Sbjct: 420 DAFEWKVPVEQLSGPRYDADMPEKSFDRAMASLPPVREVAEPAAPSGPVVNPEPEALVEV 479

Query: 474 IHPLDPHIRQPDDP 487
                  +  P+ P
Sbjct: 480 AAAEAVTVVAPEAP 493


>gi|163742569|ref|ZP_02149955.1| HemY domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161384154|gb|EDQ08537.1| HemY domain protein [Phaeobacter gallaeciensis 2.10]
          Length = 507

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 100/489 (20%), Positives = 200/489 (40%), Gaps = 15/489 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +L+++ +  +++++     +++     V IT     Y  S    +  L   +F   +LF 
Sbjct: 5   LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVVWVLFK 64

Query: 61  VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           +        RF       +     K    KGY+AL  GLM++A+    LA  M      +
Sbjct: 65  LLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E  + ++   +TR   V  +  +    GD ++A
Sbjct: 123 KYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTDTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILL 229
           ++ A KAL + P    V + ++     A++W+ A   L  K K        + R  A+L 
Sbjct: 183 RQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ S     +G  +     AIE+ +L  + + A+  AA++ ++++KKR A  +L+K W+ 
Sbjct: 243 LSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAWEA 302

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A+ +  +   E    ++KR  +L  +  +  E+ ++++++ +      +A    
Sbjct: 303 QPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARRAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
              ++  P      L+A IE+    +   I  W   AL+A   P W+  +  ++ + W P
Sbjct: 363 GDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEWAP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +     +     W+ P       ++      L    P        ++  +  L   +  S
Sbjct: 423 VCENCASFDTLSWRRPEAPEIVGATGAQVLPLITGTPEGAAGRDASDIPEVELLEGEDTS 482

Query: 468 SFEDSTIHP 476
             +     P
Sbjct: 483 VSDVGETLP 491


>gi|222150058|ref|YP_002551015.1| hypothetical protein Avi_4148 [Agrobacterium vitis S4]
 gi|221737040|gb|ACM38003.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 526

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 155/516 (30%), Positives = 259/516 (50%), Gaps = 29/516 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+I Y  ++  +   F  ++  P ++ I W  +L   S     +++   +   ++ + 
Sbjct: 1   MIRIIVYILIVLALGFGFSWLADRPGELQIVWQGQLIEMSLTAAATMIVAIVAVVMIGWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   + P  +      R  D+GY+A+ TGL++  A N  LAR+M +          E 
Sbjct: 61  LVRTLWTSPHSMRRYFRARKRDRGYQAISTGLIAAGAGNAALARRMSARARGLVRADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ +LE Q AL E +++ A    E M+  P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 121 LIMVLEAQAALIEGKHDDARRIYEQMVADPETRELGLRGLYVEATRLGAHEAARQYAEKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            + +P  PW  +A ++       W+ AI  L+Q++        E +R +A+LL A++++ 
Sbjct: 181 AEDAPYLPWAAKAALEYRCQTSAWNEAIHLLDQQRVAGVLARAEADRLKAVLLTAKAMDQ 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D GD  A+  +A+ +LKL  + + AS+ AA++L+ ++  RKA  +LE  WK+ PHP+IA
Sbjct: 241 LD-GDPAAARDNAMNALKLAKDLVPASVTAARALLREDNLRKAGSVLETAWKLAPHPDIA 299

Query: 297 NIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           ++Y      +  V +LKRA RLE++   +V SL++V+++ALE     +A AKA  A ++ 
Sbjct: 300 SLYVRARGGDGAVDRLKRAERLEQVKPNNVYSLLVVAEMALEARDFTKARAKAEAAARMQ 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
             + +FLLLA IE A + +  +I YW   AL A  DP W++ DG +S  WLP SP+S  L
Sbjct: 360 ASERVFLLLADIEDAETGDQARIRYWMAQALKAPRDPSWVA-DGQVSEKWLPYSPVSGRL 418

Query: 416 CYFEWKIP--------------------TKSPEYISSENINFSLEMAYPADDLQSMLNNG 455
             FEWKIP                     + P     E    S+         +      
Sbjct: 419 DAFEWKIPYAQLSGPVEDGTVISGAAALAELPPLGQGEKPASSIPARKIDTLPEQPEALA 478

Query: 456 KKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491
             +  P+     + +     P       PDDPG+++
Sbjct: 479 PSSSQPTASPKPTPKSHEPEPF--FGGAPDDPGVRD 512


>gi|254473094|ref|ZP_05086492.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062]
 gi|211957815|gb|EEA93017.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062]
          Length = 613

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 117/493 (23%), Positives = 224/493 (45%), Gaps = 13/493 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +F  + L+      ++  P  V++ W   + + S    +      + A I+++ 
Sbjct: 1   MVRVLIFFAFVFLLALGGAWMADRPGVVTLEWQGYVVQASLLTTVVAFGASIVASIVVWG 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P ++ H + +R  DKGY AL  GLM++ + +   ARK      +     +E 
Sbjct: 61  FFRLIWKSPTLVSHFMQRRRKDKGYDALSQGLMALGSGDTLHARKFGLKADKLLD-GDEP 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q +  +  +  +  + E ML+   +    ++ LY E+ R  +  +A+ +A +A
Sbjct: 120 AARLLLAQASQLDGDHAESRRRFEAMLEDDRSMAVGLHGLYIEAERESEPAAARHFAEEA 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236
            ++ P   W   AV+    ++ +W  AI  L +    +  + K   R +A+LL AR+LE 
Sbjct: 180 FNLVPGLRWAGNAVLGYQAVSGDWEEAIATLERNYAARMLDKKTLRRQKAVLLTARALEL 239

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ +   +   A+E+  L  + + A+I AA+      + RKA  ILE  WK++PHP++A
Sbjct: 240 ENE-NPDRARTLAVEAHGLAPSLVPAAIVAARLRTRAGEIRKASKILEATWKLSPHPDLA 298

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y H+   ++V  +L R   L  +   S E  + ++  A+E    D+A  +    ++  
Sbjct: 299 EAYAHVRPGDSVTDRLSRVRTLASMRAYSSEGAIAIAVAAIEAKKFDEAREQLKRVLRSE 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P +  FLL+A +E+    +  +I  W   A+ A  D +WI+ DG +S+ W P+SP +  +
Sbjct: 359 PTQRAFLLMADLEEREHGDQGRIREWLSRAVRAPHDKVWIA-DGVVSANWAPVSPKTGRV 417

Query: 416 CYFEWKIPTKSPEY-----ISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470
             +EW  P  + +      +  + +    E+A P   L   +        P      +  
Sbjct: 418 DAYEWATPENTMDQDQTIEVIDDKLFEPPELAAPVQVLDEPVKADIVVPKPQDVDTPAAP 477

Query: 471 DSTIHPLDPHIRQ 483
                P    + +
Sbjct: 478 KEEPAPAPAPVEK 490


>gi|159045958|ref|YP_001534752.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12]
 gi|157913718|gb|ABV95151.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12]
          Length = 502

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 96/483 (19%), Positives = 192/483 (39%), Gaps = 16/483 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW----- 55
           +L+++ +  +++ +     ++    E V I+  +  +  SP   + +    L A      
Sbjct: 5   LLKILIFVTLVAALTFGATLLMETGEQVRISLASTEFTLSPVAAVVLSLVLLGAAYLLFK 64

Query: 56  --ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
              LL A  +F       +     +    KG++AL  G+M++A+    +A  M      +
Sbjct: 65  LAGLLLATLKFLNGDETAISRYFMRNRERKGFEALAQGMMALASGEGRVA--MAKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E  + ML    T+   V  L  +    GD  +A
Sbjct: 123 RYLGRPDLTQLLTAQAAELSGDRAKATETYKKMLTDERTKFVGVRGLLHQKLSEGDTETA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
              A KA  + P    V + +++     + W+ A   L  K K+         R  A+L 
Sbjct: 183 MALAEKAFALKPRNGEVQDTLLRLQAGDENWAGARKTLAAKLKSGDLPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            + + +  + G M  +   A E+ +L    + ++  AA+  I   K+R+A  +L K W++
Sbjct: 243 YSEAADAVEAGKMDKAEAHANEANRLAPGLVPSAALAARMAIRAGKQRQATKLLRKAWEL 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           NPHPE+A  Y  ++ + T   ++KR   L + N    ES ++++++ +       A    
Sbjct: 303 NPHPELAAAYAEIVPDETAAARIKRFEALVKPNPNHDESRLLMAELFIAAEDFPAARKAM 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407
               +  P      ++A +E+    +   +  W   A+ A   P W  ++   + + W P
Sbjct: 363 GDLYETKPNARSLTIMAAVERGEGSDDAIVRAWLAKAVTASRGPQWTCENCNNIHASWTP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +           W  P +S   +++      L +   A D  +  +  ++  +P +  ++
Sbjct: 423 VCGNCGAFDSLSWVEPPESEIALTNSAEMLPLIVGAIA-DQSAKKDPEEEVIVPDVVDIT 481

Query: 468 SFE 470
             E
Sbjct: 482 PTE 484


>gi|84514840|ref|ZP_01002203.1| HemY domain protein [Loktanella vestfoldensis SKA53]
 gi|84510999|gb|EAQ07453.1| HemY domain protein [Loktanella vestfoldensis SKA53]
          Length = 479

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 91/477 (19%), Positives = 178/477 (37%), Gaps = 15/477 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++++  +   ++ +     ++       +I      +      ++  L   +    L   
Sbjct: 5   LIKITAFILTVTALTYGAAMLYDVDGGATIAVMGIEFTLRTLDMVVALVALVVLVWLGLR 64

Query: 61  VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           +         F       +     +    KGY+AL  G+M++A+    LA  M      +
Sbjct: 65  LLALLAASYHFLNGDETAISRYFDRNRERKGYEALAEGMMALASGEGHLA--MTKAARAE 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              H   L  LL  Q A        A E  + +L    TR   V  +  +    GD + A
Sbjct: 123 KYLHQPQLTNLLTAQAAEMTGDRRKAEETYKKLLADDRTRFVGVRGIMKQKLAEGDTDLA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  + P      + ++Q      +W  A   L  K K+         R  A+L 
Sbjct: 183 LKLAQKAFALKPKHAETQDVLLQLQADKADWKGARQTLGAKLKSGTLPRDVHKRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ + +  D+G+ I +   AI + +L  + I A++ AA+  I+Q   R A  +L K W  
Sbjct: 243 LSEARDILDEGNPIEAREAAIAANRLSPDLIPAAVMAARGYIAQGNARYASRVLVKTWTA 302

Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP+IA  +  ++ + T   +LKR   L +   +  E+ ++++++ +       A    
Sbjct: 303 QPHPDIATAFAEIVPDETPQARLKRFATLTKATPDHPEAKMLMAELHVAAEDFPAARRDI 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407
              ++  P      L+A +E+    +   +  W   AL A   P WI D   ++   W P
Sbjct: 363 ADLVETDPTARSLALMAAVERGVGADDAVVRGWLTRALTAPRGPQWICDKCQHIHPQWGP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIK 464
           +           WK P      + +      L +       +++ ++ +       K
Sbjct: 423 VCGNCAAFDTLSWKRPPAGEVSMPAGTEMLPLIVGSQPVPDETLPDDAETVAKDDAK 479


>gi|260575763|ref|ZP_05843759.1| HemY domain protein [Rhodobacter sp. SW2]
 gi|259021916|gb|EEW25216.1| HemY domain protein [Rhodobacter sp. SW2]
          Length = 491

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 98/458 (21%), Positives = 173/458 (37%), Gaps = 15/458 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF------- 53
           +L+++ +  VI+ +      ++     + I          P   L      +        
Sbjct: 6   LLKVVLFVAVIAGLTFGAGRLTDTGGGLQIAVYGYEVTLGPLQALVGALLLVVAVWLLLK 65

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           A  LL AV +F       +     +    KGY+AL  G++++A+    +A  +      Q
Sbjct: 66  AIGLLVAVLKFLNGDETAVSRYFDRNRERKGYQALSEGMIALASGEARVA--LSRAAKAQ 123

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  LL  Q A        A E  + +L    TR   V  L  +    GD  +A
Sbjct: 124 KYLGKPELTTLLTAQAAELAGDSARATEAYKALLTDEKTRFVGVRGLMLQKVASGDKATA 183

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KA  + P      + ++Q      +W  A T L  K +      + + R  A+L 
Sbjct: 184 LKLAEKAFAMKPRHTETQDVLLQLQASQADWKGARTTLGAKLRAGTLPREVFRRRDAVLA 243

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  +    D+   I S   AIE+ KL  + I A+  AA+S I++   + A  +L+K W+ 
Sbjct: 244 LQEAKTVFDESASIESREAAIEANKLSPDLIPAAAMAARSYIAKGDAKNATRVLKKAWEA 303

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +   E+   +LKR   L  I+    E+ ++++++ L       A    
Sbjct: 304 RPHPDLAAAFAEIEPTESAQARLKRFKLLTAIHPTHEETRLLLAELNLAAEDFPAARRII 363

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
                  P      ++A IE+    +   +  W   AL A   P W  D    + + W P
Sbjct: 364 GDLATSHPTGRSLAIMAAIERGEGADDAVVRGWLARALTAPRGPQWCCDKCQGIHAQWTP 423

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPA 445
           +           W+ P +     S+      L +  P 
Sbjct: 424 ICDNCGAFDTLSWREPPEGSRPSSTGTELLPLIVGSPK 461


>gi|209551274|ref|YP_002283191.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209537030|gb|ACI56965.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 536

 Score =  441 bits (1135), Expect = e-121,   Method: Composition-based stats.
 Identities = 168/523 (32%), Positives = 264/523 (50%), Gaps = 34/523 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++RL+ +   + L+   F  ++  P D+S+ W  ++Y+T   V  S +   + A ++ + 
Sbjct: 2   LIRLVAFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALIAAVMIAWW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 62  FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +Y+ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 122 LISLLEAQAALIEGRYDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        + NR  A+LL AR+ E 
Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKADANRLHAVLLTARAGEK 241

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +  DA ++LKL  + I A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 242 LE-GNPAGARDDAQQALKLAADFIPAALVAAKALFREGGVRKAASILEQAWKSAPHPEIG 300

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y      ++T+ +LKRA RLE +   +VESL++V++ AL+     +A AKA  A ++ 
Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGLRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  L
Sbjct: 361 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMA-------------YPADDLQSMLNNGKKNHLPS 462
             FEWK P    E    +     +E A              P +D + +          +
Sbjct: 420 DAFEWKAPFGQIEGPLEDGSVPPIETALKTLPPLRDVRPESPVNDHRIIELERAATIAEA 479

Query: 463 IKKVSSFEDSTIHPLDPHI--------------RQPDDPGIKE 491
           ++   +   +   P++P                  PDDPG+++
Sbjct: 480 VRPTPAPAPAKSKPVEPVSGKTPAPGEAKPFFGGLPDDPGVRD 522


>gi|190893756|ref|YP_001980298.1| hypothetical protein [Rhizobium etli CIAT 652]
 gi|190699035|gb|ACE93120.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
          Length = 535

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 156/463 (33%), Positives = 243/463 (52%), Gaps = 7/463 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  ++ L+   F   +  P D+S+ W  ++Y+T   V +S +   + A ++ + 
Sbjct: 1   MIRLVVFALLVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIGWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 61  FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +  DA+++LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPE+ 
Sbjct: 241 LE-GNPAGARDDALQALKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEVG 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y      ++T+ +LKRA RLE +   +VESL++V++ AL+     +A AKA  A +I 
Sbjct: 300 QTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARAKAEAAARIE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  +
Sbjct: 360 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 418

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458
             FEWK P    E    +    +                 +  
Sbjct: 419 DAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESP 461


>gi|327188880|gb|EGE56072.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
          Length = 580

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/523 (31%), Positives = 264/523 (50%), Gaps = 34/523 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  ++ L+   F   +  P D+S+ W  ++Y+T   V +S +   + A ++++ 
Sbjct: 46  MIRLVVFALLVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 105

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 106 FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 165

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 166 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 225

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 226 ADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 285

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + GD   +  DA+++LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPEI 
Sbjct: 286 LE-GDPAGARDDALQALKLAADLVPAALIAAKALFREGGLRKAASILEQAWKSKPHPEIG 344

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y      ++T+ +LKRA RLE +   +VESL++V++ AL+     +A AKA  A +I 
Sbjct: 345 QTYVKARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDTQEFAKARAKAEAAARIE 404

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WLP+SP++  +
Sbjct: 405 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 463

Query: 416 CYFEWKIPTKSPEYISSENINFS--------------------------LEMAYPADDLQ 449
             FEWK P    E    +    +                          +E+   A   +
Sbjct: 464 DAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESPVNDHRIIELERAATIAE 523

Query: 450 SMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI-RQPDDPGIKE 491
           ++           ++  +  +    +   P     PDDPG+++
Sbjct: 524 AVRPAPAPAKPKPVEPAAGDKAPVPNEAKPFFGGLPDDPGVRD 566


>gi|299133147|ref|ZP_07026342.1| HemY domain protein [Afipia sp. 1NLS2]
 gi|298593284|gb|EFI53484.1| HemY domain protein [Afipia sp. 1NLS2]
          Length = 545

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 126/527 (23%), Positives = 229/527 (43%), Gaps = 43/527 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R+  +  ++++       V+     V ++W      TS  V+  +    + A IL++ 
Sbjct: 1   MVRIFSFLILLTVAALGATWVADQSGGVVLSWNGWRAETSLPVLALLALILVIAAILVWT 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R F   PA L    H++   K   A+  GL+++   +  LA +            ++ 
Sbjct: 61  IVRAFWKTPARLRRYRHEKREAKARHAITQGLIAVGTGDSSLAHRHAGTAK--RLAEHDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  E     A      M +    R   +  L+ E+ R  DL++A   A +A
Sbjct: 119 LTLLLQAQTAQLEGDRPGAQHAFHAMAERQDMRLLGLRGLFIEAQRNDDLHTAVAMAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
           L I+P +PW + AV+       +W  A+  L+            + R R +LL AR+LE 
Sbjct: 179 LKIAPSSPWASHAVLGFRCAQSDWDGALALLDSNYSASLIENAPYRRQRGVLLTARALE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ D   S   A+E++K     + A++ AAK     N+ R+A   +E  W  NPHP++A
Sbjct: 238 LEERDRDLSRKSAMEAIKFAPQLVPAAVLAAKFYSEDNQVRRAMRTIEVAWNANPHPDLA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H+   ++   +L R   L +   +  ES + +++ A+E     +A       +   
Sbjct: 298 DAYAHVRLGDSARERLARVELLAQKAPDHRESRLAIARAAIEASEFGRAREALAPLLTTM 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
             + + LL+A++E+A +H+  +   WT  A+ A PDP W + DGY+S  W P+SP++  L
Sbjct: 358 -TQRVALLMAELERAGNHDEGRAREWTARAVRAAPDPAWTA-DGYVSDRWRPVSPVTGRL 415

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSML------------NNGKKNHLPSI 463
             F+W  P  +   ++S++++ + E ++  + L                        P  
Sbjct: 416 DAFQWVTPVAA---LTSDHVDVAAEASHLPEKLPEPASVAIESKVAPAEPEPAVEKAPVE 472

Query: 464 KKVSSFEDSTIHPL------------------DPHIRQPDDPGIKEQ 492
              +  +   + P                    P +R PDDPG+ E 
Sbjct: 473 AAPAPVKTDNVAPPVFRARPAGEARSPAPSAIIPLVRAPDDPGVPED 519


>gi|118592001|ref|ZP_01549395.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614]
 gi|118435297|gb|EAV41944.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614]
          Length = 669

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 121/506 (23%), Positives = 233/506 (46%), Gaps = 23/506 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW---------GNRLYRTSPFVILSILYFF 51
           M+R++ +F ++  V   F  ++  P  + I+W         G  ++  SP ++      F
Sbjct: 1   MIRVLFFFALLFAVALGFAWMADLPGTIQISWPVYENGQQVGTDIWEQSPVIVGLAAAVF 60

Query: 52  LFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111
           L  ++++    R  L  P +      +R  DKGY AL  GL+++   N  LAR+    + 
Sbjct: 61  LAVFLVIVWAIRVVLKSPQIASRFFRRRRKDKGYNALSQGLIALGTGNAKLARRY--ALD 118

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 +E    LL  Q A    + + A ++ E ML+ PAT+   ++ L+ E+ R  +  
Sbjct: 119 ADKLLDDEPAAKLLLAQTAQLAGKDDEARQRFEAMLEDPATKALGLHGLFIEAERHKEPV 178

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAI 227
           +A+ YA +A   SP   W  +AV+    +A  W  A+  L +    K  + K + R RA+
Sbjct: 179 AARHYAEEAAKTSPGLEWAGKAVLGYQAVAHHWDEALKTLERNYAAKMLDKKTYRRQRAV 238

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +L A ++   + G+   +Y  A E+  L  + + A++  ++    +   RKA  +LE  W
Sbjct: 239 ILTALAM-KLEDGEPERAYSLAKEAHGLALDLVPAAVLTSRLATRRGDIRKASKVLEATW 297

Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           ++ PHP++A  Y H+   ++ V +LKR   L      + E  + +++ A+E    ++A  
Sbjct: 298 RLFPHPDLAETYAHVRTGDSAVDRLKRVKSLSAQRANTPEGALAIARAAMEAREFEEARQ 357

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406
           +    ++  P ++ FLL+A++E+A + +  +   W   A+ A  D +W++ DG +S+ W 
Sbjct: 358 QLKKVLQSEPTRQAFLLMAEVEEAENGDRGRTRDWLARAVSAPLDKVWMA-DGIISAEWQ 416

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
           P+SP++  L  F+W  P      +S E+     +  + A  L S         +  ++  
Sbjct: 417 PVSPVTGKLDAFQWATPGS----LSDEDGPLLEDSLFDAPALPSATVAEPVRPVSDVEDS 472

Query: 467 SSFEDSTIHPLDPHIRQPDDPGIKEQ 492
           +   +          + P +P     
Sbjct: 473 AVVLEVEPVTKTTDPK-PSEPKSDAD 497


>gi|153008313|ref|YP_001369528.1| HemY domain-containing protein [Ochrobactrum anthropi ATCC 49188]
 gi|151560201|gb|ABS13699.1| HemY domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 553

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 137/504 (27%), Positives = 238/504 (47%), Gaps = 16/504 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ YF V++ +   F  ++  P ++ +T+    Y       ++ +   + A ++L+ 
Sbjct: 1   MLRVLFYFVVVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAMLILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L      R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M+  P TR   +  LY E+ R+G L++A+ YA +A
Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGALDAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + A++ Q     +W  A+  ++ +K+          + RA LL A+++  
Sbjct: 181 ASQAPQLEWASSAMMGQLCAEGDWDAALKLVDARKQALAHSKDVVKKERAALLTAKAMAV 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D   +   A+E+ KL  + + A++ AA++L S    RK   ILE  WK  PHP+IA
Sbjct: 241 ADV-DHAQAKALALEANKLTPDLVPAAVVAARALFSDGDMRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ +
Sbjct: 300 STYVYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+S  W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---------KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
             FEWK+P          + PE            +       ++ + +            
Sbjct: 419 NSFEWKVPVVELAPAIEAEKPEIKGPVEAKPGNPLVLAEPKDKAGVVDASAVVERKSPVR 478

Query: 467 SSFEDSTIHPLDPHIRQPDDPGIK 490
              E   I P    ++    P +K
Sbjct: 479 DVEEAEVIVPAAEPVKVSPAPSVK 502


>gi|15966835|ref|NP_387188.1| hypothetical protein SMc03234 [Sinorhizobium meliloti 1021]
 gi|307301663|ref|ZP_07581422.1| HemY domain protein [Sinorhizobium meliloti BL225C]
 gi|307316313|ref|ZP_07595757.1| HemY domain protein [Sinorhizobium meliloti AK83]
 gi|15076107|emb|CAC47661.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306898153|gb|EFN28895.1| HemY domain protein [Sinorhizobium meliloti AK83]
 gi|306903361|gb|EFN33950.1| HemY domain protein [Sinorhizobium meliloti BL225C]
          Length = 545

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 161/533 (30%), Positives = 262/533 (49%), Gaps = 44/533 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  ++  +   F  ++  P ++S+ W  +L   S     SIL     A +++  
Sbjct: 1   MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLMRAASILISLFAAVLIVVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +      R  D+GY+AL TGL++  A +  LARKM +      +   E 
Sbjct: 61  LLRTIWLSPHTVTRYFRSRKRDRGYQALSTGLIAAGAGDANLARKMAARTRNLISSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q AL E +Y+ A +K E M   P TRE  +  LY E+ R+G   +A++YA +A
Sbjct: 121 LIHLLEAQTALIEGKYDDARKKFEAMADDPETRELGLRGLYLEAKRLGANEAARQYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            + +P  PW T A +     A++W  AI  L+Q +        E +R +A+LL AR++E 
Sbjct: 181 SEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAAHVLEKNEADRKKAVLLTARAMER 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D  ++  DA  +LKL D  + A++ AAK+L  +   RK   ILE++WK++PHP+IA
Sbjct: 241 LD-ADPKSARDDAQAALKLDDRLVPAALVAAKALFREENLRKGASILERMWKLDPHPDIA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y      ++ + +LKRA +LE +   +  +L  V++ AL+   +  A  KA  A ++ 
Sbjct: 300 RLYVRARGGDSALDRLKRAKKLESLRSNNAVALATVAEAALDARELALARTKAEAAARLE 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+ IFLLLA IE+A++ +  +I +W   AL +  DP W + DG  S VWLP+SP+S  L
Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRHWMAQALKSPRDPAWTA-DGVTSPVWLPVSPVSGRL 418

Query: 416 CYFEWKIPTKSPEYISSEN-------INFSLEMAYPADDLQSMLNNGKKNHLPSIKK--- 465
             FEWK P       + +        I     +A     ++           P+ ++   
Sbjct: 419 DAFEWKAPPSQIAAATEDGHLNPDQAIRSLPPVATVPRPVEEPAPERTVEAAPTAERDQT 478

Query: 466 ---------------------------VSSFEDSTIHPLDPHIRQPDDPGIKE 491
                                       +  +D+   P     R PDDPG++E
Sbjct: 479 ERERVERERAGPEKAISVPDRKEPAASPAKGKDAEEAPDPFFGRPPDDPGVRE 531


>gi|148251900|ref|YP_001236485.1| HemY domain-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146404073|gb|ABQ32579.1| putative exported protein of unknown function with HemY domain
           (porphyrin biosynthesis) [Bradyrhizobium sp. BTAi1]
          Length = 641

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 117/502 (23%), Positives = 216/502 (43%), Gaps = 16/502 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  ++ L       V+    DV + WG      +  V +  L   + A +L++ 
Sbjct: 1   MLRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRIAMTLPVFVLALGLTITACVLVWN 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L  P  + +    R + +G  A+  GL++I   ++  AR+            ++ 
Sbjct: 61  LISALLRAPGRIRNHHRARRHQRGRHAITHGLLAIGHGDLTAARQHADAAK--RLAGDDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A      + A      M +   TR   +  L+ E+ R  D  +A   A +A
Sbjct: 119 LTLLLHAQAAQLGGDRDGAQRAFRAMAERHDTRLLGLRGLFIEAQRADDAYAAVMIADEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236
           L ++P+A W + AV+       +W+ A+  L+        +   + R R +LL AR++  
Sbjct: 179 LKLAPNATWASHAVLGFRCAQGDWNGALAILDSNYTAGMIDKPTYRRQRGVLLTARAIA- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +   +   A+E++KL    I A++ AAK     ++ R+A  I+E  W   PHP++A
Sbjct: 238 LETENRDLARASAMEAVKLAPTLIPAAVLAAKFESEAHQVRRAMKIIEAAWTAGPHPDLA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H+   ++   +L R   L    ++ +E  + +++ A++     +A A         
Sbjct: 298 DAYAHVRLGDSARQRLTRIENLAARTRDHIEGALAIARAAIDAAEFGRARAAL-APFTDD 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A++E+    +  K   WT  A+ A  DP W + DGY+S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAELERTEHGDAGKSREWTLRAVRARHDPAWTA-DGYVSDHWRPISPVTGRL 415

Query: 416 CYFEWKIPTKSPE------YISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469
             F+W+ P  S          SSE  +  L     A   + +    ++    S   V + 
Sbjct: 416 DAFQWQTPVASLPSERNSVIESSEFADAVLAPPTRATIPEGLAEPPREVARQSQLDVIAP 475

Query: 470 EDSTIHPLDPHIRQPDDPGIKE 491
                 P  P      DP +  
Sbjct: 476 TPQDNVPPRPAETAVSDPAVDT 497


>gi|126732179|ref|ZP_01747980.1| HemY domain protein [Sagittula stellata E-37]
 gi|126707261|gb|EBA06326.1| HemY domain protein [Sagittula stellata E-37]
          Length = 518

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 105/492 (21%), Positives = 192/492 (39%), Gaps = 22/492 (4%)

Query: 12  SLVICSFIIVSHYPED----VSITWGNRLYRTSPFVILSILYFFLFAWI-------LLFA 60
           + +      +            IT     Y  +P +++      L A          L A
Sbjct: 12  AALTLGLGYLIEADGTGLAQARITLNGVEYTLTPVMMVIGALVLLLAVWLLLKLASFLVA 71

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + RF       L    H+    KGY AL  G+M++A+    LA  +      +   H   
Sbjct: 72  LLRFINGDETALSRHFHRNRERKGYAALSDGMMALASGEGRLA--IAKAQKAEKYLHKPE 129

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  L+  Q A        A E  + +L    TR   +  +  +    GD N+A + A +A
Sbjct: 130 LTDLVTAQAAEMMGDRKKAEETYKKLLTRDGTRFVGIRGIMKQKLASGDTNTALQLAERA 189

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
             + P    V + ++Q      +W+ A   L  K K+       + R  A+L ++++ E 
Sbjct: 190 FALKPKHEEVQDTLLQLQAEKADWTGARKTLQAKLKHGTLPRDVYKRRDAVLALSQATEI 249

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ + IA+   AIE+ +   + + A+  AA++ I+Q + R A  +L+K W+ +PHP++A
Sbjct: 250 ENRDESIAAAEKAIEANRNSPDLVPAAAKAARAYIAQKRPRNAIRVLKKAWETHPHPDLA 309

Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y  +    T   ++KR + L  IN +  E+ ++ +++ L      +A       ++  
Sbjct: 310 AAYAEIEPNETPDERIKRFVPLTRINPDHRETRLLKAELNLAAEHFPEARRSLGDLVEKE 369

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKT 414
           P   +  ++A IE+        +  W   A+ A   P W+ D+   +   W P       
Sbjct: 370 PDARVLAIMAAIEKGEGAPDQVVRGWLAKAVTAPRGPQWVCDNCKTIHGEWRPTCTNCGA 429

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474
                WK P +S   + ++     L +    D   +          P +  VS  E    
Sbjct: 430 FDTLSWKTPAQSEVVLPAQANMLPLIIGALEDKSPAEDPAVVPEANPGMIDVSPVERE-- 487

Query: 475 HPLDPHIRQPDD 486
            P  P   +P D
Sbjct: 488 -PKAPDATEPAD 498


>gi|254438357|ref|ZP_05051851.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307]
 gi|198253803|gb|EDY78117.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307]
          Length = 475

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 94/475 (19%), Positives = 175/475 (36%), Gaps = 28/475 (5%)

Query: 13  LVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL-------FAVSRFF 65
                  ++       +I  G +    S   +   L   +    L+        A  +F 
Sbjct: 2   AATFGATMLLEMEGSATIDIGGQAASFSVIEMAIGLIILVALVWLVSKLVGLAVAAFKFL 61

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
                 +     +    KGY+AL  G++++A+    LA  M      +       L  LL
Sbjct: 62  NGDETAISRYFSRNRERKGYEALSEGMLALASGEGRLA--MAKANRAEKFLERPELTNLL 119

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q A        A      +L    TR   V  +  +  + GD ++A   A KA  I P
Sbjct: 120 TAQAAELAGDRKTAELTYRKLLANDKTRFVGVRGIMKQKLQDGDTDTALLLAQKAFAIKP 179

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGD 241
                 + +++      +W  A   L  K K  +       R  A+L ++ +     +G 
Sbjct: 180 KHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQLPRNVHRRRDAVLALSEAKGVFAEGA 239

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
            + +   AIE+ ++  + + A++ AA+S +++N  R A  +++K W + PHP++A  +  
Sbjct: 240 TLEAQEAAIEANRMSPDLVPAAVMAAQSHVNKNADRAATRVIKKAWDIAPHPDLAAAFAA 299

Query: 302 LLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +   E+   +LKR   L + + +  E+ ++++++ L      +A       +   P    
Sbjct: 300 IAPHEDPAVRLKRFGALTKAHPDHPETRMLLAELNLAAEDFPEARRAITELVAQDPTARS 359

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYFE 419
             ++A IE+        +  W   AL A   P WI D+  ++   W+P+           
Sbjct: 360 LTIMAAIERGEGSTDAVVRGWLSKALIATRGPQWICDNCQHIHPAWVPVCVNCSGFDTLA 419

Query: 420 WKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474
           W+ P K              E+A PA      L  GK         V   E   +
Sbjct: 420 WREPPKG-------------EVAMPAGVEMLPLIVGKIEPSKDTTDVEILEAEVV 461


>gi|265982894|ref|ZP_06095629.1| HemY domain-containing protein [Brucella sp. 83/13]
 gi|264661486|gb|EEZ31747.1| HemY domain-containing protein [Brucella sp. 83/13]
          Length = 539

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 131/492 (26%), Positives = 232/492 (47%), Gaps = 15/492 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +    +E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 243 LD-THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFPHPDIA 301

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 302 ATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475
             FEWK+P           +  ++E+  P                       S  +    
Sbjct: 421 NSFEWKVPVV--------ELAPAIEVEKPEIKAPLPEIKAAAPISAPESTRESASELVAE 472

Query: 476 PLDPHIRQPDDP 487
           P+   +R+   P
Sbjct: 473 PVPAPVRETAAP 484


>gi|254717951|ref|ZP_05179762.1| hypothetical protein Bru83_00095 [Brucella sp. 83/13]
 gi|306838961|ref|ZP_07471785.1| HemY domain protein [Brucella sp. NF 2653]
 gi|306405964|gb|EFM62219.1| HemY domain protein [Brucella sp. NF 2653]
          Length = 537

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 131/492 (26%), Positives = 232/492 (47%), Gaps = 15/492 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +    +E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 ATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475
             FEWK+P           +  ++E+  P                       S  +    
Sbjct: 419 NSFEWKVPVV--------ELAPAIEVEKPEIKAPLPEIKAAAPISAPESTRESASELVAE 470

Query: 476 PLDPHIRQPDDP 487
           P+   +R+   P
Sbjct: 471 PVPAPVRETAAP 482


>gi|294679027|ref|YP_003579642.1| HemY domain-containing protein [Rhodobacter capsulatus SB 1003]
 gi|294477847|gb|ADE87235.1| HemY domain protein [Rhodobacter capsulatus SB 1003]
          Length = 480

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 91/477 (19%), Positives = 170/477 (35%), Gaps = 15/477 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF-------A 54
           +++  +  V+  +      +S   E + I              + ++   +         
Sbjct: 6   IKISLFVAVVVGLAFGAAWLSDLGETIRIIAFGIELNLGALQAVILIGLAILTIWLALKV 65

Query: 55  WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114
              +FA  RF       +     +    KGY+AL  G++++A+    LA         + 
Sbjct: 66  LGFVFAFIRFVTGDETAISRYFDRNRERKGYEALAEGMLAVASGESKLAA--SKASKAER 123

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
                 L  LL  Q A+       A E    +L    TR   V  L  +    GD ++A 
Sbjct: 124 YLRRPELTNLLTAQAAMMNGDTRKAEEVYRKLLADQRTRFVGVQGLLSQKLAEGDTDTAV 183

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230
           + A KA  ++P    V   + +      +W  A   L  K +          R  A+L +
Sbjct: 184 KLAQKAFALNPKNLEVQNTLFKLQTEVGDWKGARDVLLAKMRQGQLPKDVHKRRDAVLAL 243

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
             +    D G  I +   AI + K   + I A+  AAK+   +   + A  +L K W+  
Sbjct: 244 QEAKAVLDGGTSIEAQEAAIAAAKASPDLIPAAAMAAKAHYDKGDAKSATRVLLKAWEAQ 303

Query: 291 PHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           PHP++A ++  ++  E+   +LKR  +L  +  +  E+ ++ +++ +       A     
Sbjct: 304 PHPDLAAVFASMVPGESATERLKRFEKLLSLRPDHEETRLLRAELCIAAEDFPAARRALG 363

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPL 408
             ++  P   +  L+A IE+    +   +  W   AL A     W  D    + S W P+
Sbjct: 364 NLVEANPTSRVLTLMAAIERGEGEDDAVVRGWLAKALTAPRGKQWCCDKCQNIQSQWGPV 423

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
                      W+ P  +   + +      L +A            G    L   +K
Sbjct: 424 CDNCGGFDTLSWREPAHNNMPLPNGAEMLPLIVAKGTKADAGATLEGTARALNEREK 480


>gi|310817089|ref|YP_003965053.1| HemY domain protein [Ketogulonicigenium vulgare Y25]
 gi|308755824|gb|ADO43753.1| HemY domain protein [Ketogulonicigenium vulgare Y25]
          Length = 514

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 193/505 (38%), Gaps = 21/505 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLF 59
           +L+++ +  +++ V    + ++  P    +T G       P   +++I    L  W +L 
Sbjct: 5   LLKILTFVVIVTGVTAGAVWLAEMPGGAVVTLGGVEVTLRPLESVVAIAIVMLLFWAVLR 64

Query: 60  AVSR------FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
            +        F       +     +    KG KAL   ++++AA     A        + 
Sbjct: 65  LLGLLLAVLRFINGDDTAVSRYFSRGRERKGMKALSDSVLALAAGEAKEALARAKVADK- 123

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  + ++L    A    + ++A E  + +L    TR  A+  L  +    GD  +A
Sbjct: 124 -YLGAPDVTHVLLAHTAERAGETHLAEETYKELLTSDRTRFVALQGLMKQKLTAGDTVTA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A  A    P+   V + +++    + +W+ A   L +K +        + R  A+L 
Sbjct: 183 LKLAEAAFKARPENVEVQDVLLRLQAESSDWAGARATLGEKARRGALPRDVYRRRDAVLA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           ++ +    D    I +   AIE+ +L  + + A++ AA+S I     R A  +L K W+V
Sbjct: 243 LSEAQAVFDDKVPIDARERAIEANRLSPDLVPAAVMAARSYIKDGNPRYATRVLRKAWEV 302

Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  ++ +     +L R   L  +  +  E+ ++ +++ +  G    A    
Sbjct: 303 QPHPDLAEAFAEIMPDERPDQRLARFETLTNLRTDHAENKMLRAELLIANGDFPAARRAL 362

Query: 349 MLAMK-IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWL 406
              ++          L+A IE+    +   +  W   AL A   P W+    G + + WL
Sbjct: 363 GELVEGADATSRSLALMAAIERGMGADESVVRGWLTRALTAPRGPQWVCGQCGKVHAQWL 422

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPAD--DLQSMLNNGKKNHLPSI- 463
           P+           W  P  S   +        L +  P    DL   +        P+  
Sbjct: 423 PVCASCHGFDTLAWTTPPASDFAMPGGAAMLPLIVGAPVAPVDLSGDVVEQAVKPAPTPA 482

Query: 464 --KKVSSFEDSTIHPLDPHIRQPDD 486
              KV   E+  I P  P +  P++
Sbjct: 483 PQTKVEDAEEEVILPPPPDVELPEE 507


>gi|254504335|ref|ZP_05116486.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11]
 gi|222440406|gb|EEE47085.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11]
          Length = 660

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 116/484 (23%), Positives = 225/484 (46%), Gaps = 11/484 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +F ++ L    F  ++  P  +S++W   ++   P V+  ++   L A++++  
Sbjct: 11  MIRVLIFFAMLFLAALGFAWMADLPGTISVSWNGYVWEQPPVVVALVVGLVLVAFLVVIG 70

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R  L  P +      +R  DKGY AL  GL+++   N  +AR+    +      + E 
Sbjct: 71  VIRAILKSPQIAGRFFKQRRKDKGYTALSQGLIALGTGNAKMARRY--GLDADKLLNEEP 128

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q A    +   A ++ E ML  P T+   ++ L+ E+ R  +  +A+ YA +A
Sbjct: 129 ATKLLLAQTAQLAGKDGEARQRFEAMLDDPNTKTLGLHGLFVEAERQREPVAARHYAEEA 188

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236
           +  +P   W  +AV+    +A  W  A+  L +    K  + K + R RA++L A +   
Sbjct: 189 VKAAPGLEWAGKAVLGYQAVAHHWDEALKTLERNYTSKLLDKKAYRRQRAVILTALA-HK 247

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D   ++  A E+  L    + A++  ++    +   RKA  ++E  W+++PHPE+A
Sbjct: 248 LEDNDPDRAFSLAKEAHGLALELVPAAVITSRLATRRGDIRKASKVIEATWRLSPHPELA 307

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y+H+   ++ V +LKRA  L      + E  + ++K ALE    ++A  +    ++  
Sbjct: 308 ETYSHVRTGDSAVDRLKRAKSLAAQRANTAEGAIAIAKAALEAREFEEARTQLKKVLQSE 367

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P +  F+L+A++E+  + +  ++  W   A+ A  D  WI+ DG +SS W  +SP++  L
Sbjct: 368 PTRAAFILMAEVEETETGDKGRVRDWLARAVKASLDKAWIA-DGVVSSEWQAVSPVTGKL 426

Query: 416 CYFEWKIPTKSPE--YISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
             F+W  P    E   +  E+  F   +   +   +       +  + +  +     D  
Sbjct: 427 DAFQWSSPGSLNEEDGVLLEDSLFEAPVLPASTLAKDPAAEPVEPVVTAASQSKDASDEK 486

Query: 474 IHPL 477
               
Sbjct: 487 PEEA 490


>gi|83950381|ref|ZP_00959114.1| HemY domain protein [Roseovarius nubinhibens ISM]
 gi|83838280|gb|EAP77576.1| HemY domain protein [Roseovarius nubinhibens ISM]
          Length = 525

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 104/493 (21%), Positives = 193/493 (39%), Gaps = 15/493 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVIL-------SILYFFLFA 54
           ++++ +  +I     + + +      V I         +P   +        +L+  L  
Sbjct: 6   IKIVVFLGLILAASFAAMHLLSLEGGVRIVMAGYEVNLTPLNAIITLALLLLMLWLLLKL 65

Query: 55  WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114
             LL A+ RF       +     +   +KGY+AL  G+M++A+    LA  M      + 
Sbjct: 66  GALLVALLRFINGDETAMSRYFDRNRQEKGYRALTEGMMALASGEGKLA--MSRAARAEK 123

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
             H   L  LL  Q A        A E  + +L+   TR   V  L  +    GD ++A 
Sbjct: 124 YLHKPELTNLLTAQAAELTGDRRTAEEVYKRLLKDDKTRFVGVRGLLKQKIEEGDTDTAL 183

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230
           + A  A  + P    V + ++Q      +W  A   LN K K+         R  AIL +
Sbjct: 184 KLAETAFGLKPTHEEVQDTLLQLQAGQADWKGARATLNAKLKHGSLPRDLHRRRDAILAL 243

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A + + A +   I +   AIE+ +L  + + A++ AA++ I    KR A  ++ K W+  
Sbjct: 244 AEARDIAAENSTIEAKETAIEANRLSPHLVPAAVMAAQAYIEDGSKRYATRVIRKAWESQ 303

Query: 291 PHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           PHP++A  Y  +  + T   +LKR  +L +++ +  E+ ++ +++ +       A     
Sbjct: 304 PHPDLAAAYAAIEPDETPDQRLKRFAKLFKLSPDHPEAKLVEAELQIAAEDFPAARRALG 363

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPL 408
              + AP      ++A IE+    N   +  W   A+ A   P WI ++  ++   W P 
Sbjct: 364 TLAETAPDARSLTIMAAIERGAGANDTVVKGWLARAVAAARGPQWICENCQHIHHEWAPT 423

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
                 +   EW+    +   + +      L +    +  QS     +     +    SS
Sbjct: 424 CAHCHAVDTLEWRNAPGAAPAMPTGVAMLPLIVGALEEPAQSPKAEPEAESPETDAATSS 483

Query: 469 FEDSTIHPLDPHI 481
                   +D  I
Sbjct: 484 GTAPEADIVDAEI 496


>gi|307942605|ref|ZP_07657953.1| HemY domain-containing protein [Roseibium sp. TrichSKD4]
 gi|307774244|gb|EFO33457.1| HemY domain-containing protein [Roseibium sp. TrichSKD4]
          Length = 656

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/489 (24%), Positives = 228/489 (46%), Gaps = 15/489 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +F ++  V      ++  P  VSI+W   ++   P V+  +L   L A++ +  
Sbjct: 1   MIRVLVFFALLFAVALGAARMADLPGVVSISWDGYVWEQPPVVVAVVLASLLAAFLFVVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R  L+ P +      +R  DKGY++L  GL+++   N  LAR+    +     F +E 
Sbjct: 61  VIRVILNSPKIATRFFRQRRKDKGYQSLSQGLIALGTGNAKLARR--HALDADKFFSDEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q A    +   A ++ E ML  P TR   ++ L+ E+ + G+  +A+ YA +A
Sbjct: 119 ATKLLLAQTAQLAGKDEEARKRFEDMLADPQTRSLGLHGLFIEAEKQGEPAAARHYAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236
           +   P   W   AV+    +A +W +A+  L +    K  + K + R RA++L A + + 
Sbjct: 179 VKAVPGLEWAGNAVLGYQAVASDWEQALQSLERNYSAKLLDKKSYRRQRAVILTAHARQL 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D+ D   ++ +A E+  L  N + A+  AA+    +   RKA  +LE  W++ PHPE+A
Sbjct: 239 EDQ-DPDKAFANAKEAHGLAQNLVPAATIAARLATRRGDIRKASKMLETTWRLAPHPELA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H+   ++ + +LKR   L      +    + +++ A+E    D+A  +    ++  
Sbjct: 298 DAYAHVRSGDSAIDRLKRVKALAGQRTNTAVGALAIARAAMEAREFDEAREQMKKVLRSE 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P +  F+++A++E+    N  ++  W   A++A  D  WI+ DG + + W  +SP++  L
Sbjct: 358 PTRGAFMMMAEVEELEHGNRGRMREWLAKAVNAPLDKAWIA-DGVVQAEWAAVSPVTGQL 416

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475
             FEW  P       + E     +E +                    I  V   E++ + 
Sbjct: 417 DAFEWATP------NNVERETQVIEDSLFEAPQIMAQPAPTAELGDDIVDVDPAENAKVV 470

Query: 476 PLDPHIRQP 484
                 ++P
Sbjct: 471 NPPQEPKEP 479


>gi|227823721|ref|YP_002827694.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium
           fredii NGR234]
 gi|227342723|gb|ACP26941.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium
           fredii NGR234]
          Length = 541

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 164/529 (31%), Positives = 259/529 (48%), Gaps = 40/529 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  ++  +   F  ++  P ++S+ W  +L   S     +IL     A +++  
Sbjct: 1   MVRILFFILLVLALALGFAWLADRPGELSLIWQGQLIEMSLMRAATILISLFAAILIVAW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +      R  D+GY+AL TGL++  A +  LARKM        +   E 
Sbjct: 61  LIRTLWLSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDAALARKMAGRTRGLISADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q AL E +Y+ A +K E+M   P TRE  +  LY E+ R+G   +A++YA +A
Sbjct: 121 LIHLLEAQTALIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARQYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            + +P   W T A + Q   A +W  AI  L+Q +     + KE NR +A+LL AR+   
Sbjct: 181 AEKAPHLSWATLATLDQRSQAGQWDEAIRLLDQSRTANVLDKKEANRKKAVLLTARATGK 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D  A+  DA+ +LKL D  + A++ AAK+L  ++  RK   +LEK+WK +PHPE+A
Sbjct: 241 LE-ADPKAARDDALAALKLDDRLVPAALTAAKALFREDNLRKGASVLEKVWKQDPHPELA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y      ++ V +LKRA RLE +   +  SL  V++ ALE   +  A +KA  A ++A
Sbjct: 300 RLYVRARGGDSAVDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARSKAEAAARLA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + IFLL+A IE+A++ +  +I +W   AL +  DP W + DG  S  WLP+SP+S  L
Sbjct: 360 PSESIFLLIADIEEADTGDEGRIRHWMAQALRSPRDPAWTA-DGVTSPTWLPVSPVSGRL 418

Query: 416 CYFEWKIPT---------------------------------KSPEYISSENINFSLEMA 442
             FEWK P                                  ++P    +E     LE  
Sbjct: 419 DAFEWKEPPSPLAGTTEEGRVSVDEAIRSLPPVAPEHPVAVREAPATPKAEENGPVLEAE 478

Query: 443 YPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491
            P     ++    +K       K                R PDDPG+++
Sbjct: 479 RPIPTPTAITVPERKETAAPPSKSEGTAAEDEEAAPFFGRPPDDPGVRD 527


>gi|240137308|ref|YP_002961777.1| hypothetical protein MexAM1_META1p0562 [Methylobacterium extorquens
           AM1]
 gi|240007274|gb|ACS38500.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens AM1]
          Length = 511

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 114/492 (23%), Positives = 216/492 (43%), Gaps = 12/492 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + +   AR+       +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A + + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+  ++   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE+A
Sbjct: 238 HEAGEPDSATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y +L   ++   +L RA  L +++    ES +++++ A E     +A           
Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357

Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P   +  ++A+IE A     + +   W   A  A  DP W++ DG +S  W P+SP+S  
Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416

Query: 415 LCYFEWKIPTKSPEYISSENINFS--LEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
           L  F WK P +       ++       E A P     + +        P+       +  
Sbjct: 417 LDAFVWKTPPEILAGPEDDDAPVPASAEPAAPVAIPTTPVPAPVTTDSPAPSTPGFLQTG 476

Query: 473 TIHPLDPHIRQP 484
              P  P    P
Sbjct: 477 AGTPSVPPTPAP 488


>gi|163850175|ref|YP_001638218.1| HemY domain-containing protein [Methylobacterium extorquens PA1]
 gi|163661780|gb|ABY29147.1| HemY domain protein [Methylobacterium extorquens PA1]
          Length = 511

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 118/496 (23%), Positives = 218/496 (43%), Gaps = 16/496 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + +   AR+       +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A + + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE+A
Sbjct: 238 HEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y +L   ++   +L RA  L +++    ES +++++ A E     +A           
Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357

Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P   +  ++A+IE A     + +   W   A  A  DP W++ DG +S  W P+SP+S  
Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474
           L  F WK P   PE ++    + S   A         +       +P+     S   ST 
Sbjct: 417 LDAFVWKTP---PEILAGPEDDDSPAPASAEPAAPVAIPTT---PVPAPVTTDSPAPSTP 470

Query: 475 HPLDPHIRQPDDPGIK 490
             L      P  P   
Sbjct: 471 GFLQTGAGTPSVPSTP 486


>gi|218528780|ref|YP_002419596.1| HemY domain protein [Methylobacterium chloromethanicum CM4]
 gi|218521083|gb|ACK81668.1| HemY domain protein [Methylobacterium chloromethanicum CM4]
          Length = 511

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 113/492 (22%), Positives = 215/492 (43%), Gaps = 12/492 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + +   AR+       +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A + + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE+A
Sbjct: 238 HEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y +L   ++   +L RA  L +++    ES +++++ A E     +A           
Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357

Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P   +  ++A+IE A     + +   W   A  A  DP W++ DG +S  W P+SP+S  
Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416

Query: 415 LCYFEWKIPTKSPEYISSENINFS--LEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
           L  F WK P +       ++       E + P     + +        P+       +  
Sbjct: 417 LDAFVWKTPPEILAGPEDDDAPVPASAEPSAPVAIPTTPVPARVTTDSPAPSTPGFLQTG 476

Query: 473 TIHPLDPHIRQP 484
              P  P    P
Sbjct: 477 AGTPSVPPTPAP 488


>gi|17986463|ref|NP_539097.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M]
 gi|265991915|ref|ZP_06104472.1| HemY domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993646|ref|ZP_06106203.1| HemY domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265999298|ref|ZP_05465724.2| HemY domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|17982061|gb|AAL51361.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M]
 gi|262764627|gb|EEZ10548.1| HemY domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002981|gb|EEZ15274.1| HemY domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093114|gb|EEZ17249.1| HemY domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
          Length = 525

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 136/512 (26%), Positives = 237/512 (46%), Gaps = 22/512 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480

Query: 473 TIHPLDPHIRQ------------PDDPGIKEQ 492
            I P    +               DDPGI + 
Sbjct: 481 VIVPAAEPVSADEPVKAGPAHIVVDDPGIDDD 512


>gi|225853321|ref|YP_002733554.1| HemY domain-containing protein [Brucella melitensis ATCC 23457]
 gi|256045493|ref|ZP_05448376.1| hypothetical protein Bmelb1R_13396 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112219|ref|ZP_05453140.1| hypothetical protein Bmelb3E_05957 [Brucella melitensis bv. 3 str.
           Ether]
 gi|260562802|ref|ZP_05833288.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|225641686|gb|ACO01600.1| HemY domain protein [Brucella melitensis ATCC 23457]
 gi|260152818|gb|EEW87910.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|326409884|gb|ADZ66949.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539598|gb|ADZ87813.1| HemY domain protein [Brucella melitensis M5-90]
          Length = 523

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 136/512 (26%), Positives = 237/512 (46%), Gaps = 22/512 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478

Query: 473 TIHPLDPHIRQ------------PDDPGIKEQ 492
            I P    +               DDPGI + 
Sbjct: 479 VIVPAAEPVSADEPVKAGPAHIVVDDPGIDDD 510


>gi|254559413|ref|YP_003066508.1| hypothetical protein METDI0838 [Methylobacterium extorquens DM4]
 gi|254266691|emb|CAX22471.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 511

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 112/492 (22%), Positives = 213/492 (43%), Gaps = 12/492 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWSGYEIGMSLAIALTGVLVAAIVLGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    +  PA +     +R  +KG  +L  G++++ + +   AR+       +    ++ 
Sbjct: 61  VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA++A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A + + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE+A
Sbjct: 238 HEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y +L   ++   +L RA  L +++    ES +++++ A E     +A           
Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357

Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P   +  ++A+IE A     + +   W   A  A  DP W++ DG +S  W P+SP+S  
Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADD--LQSMLNNGKKNHLPSIKKVSSFEDS 472
           L  F WK P +       ++          A      + +        P+       +  
Sbjct: 417 LDAFVWKTPPEILAGPEDDDAPAPASAEPAAPVAIPTTPVPAPVTTDSPAPSTPGFLQTG 476

Query: 473 TIHPLDPHIRQP 484
              P  P    P
Sbjct: 477 AGTPSVPPTPAP 488


>gi|261755593|ref|ZP_05999302.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686]
 gi|261745346|gb|EEY33272.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686]
          Length = 525

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 243 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 481 VIVPAAEPVSA-DEP 494


>gi|260567627|ref|ZP_05838097.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|260157145|gb|EEW92225.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40]
          Length = 523

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 134/495 (27%), Positives = 235/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +Q +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|188579976|ref|YP_001923421.1| HemY domain protein [Methylobacterium populi BJ001]
 gi|179343474|gb|ACB78886.1| HemY domain protein [Methylobacterium populi BJ001]
          Length = 511

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 109/485 (22%), Positives = 215/485 (44%), Gaps = 21/485 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W      TS  + L+ +        L++A
Sbjct: 1   MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGTSLAIALTGVLVAAIILGLIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  PA +     +R  +KG  +L  G++++ + +   AR+       +    ++ 
Sbjct: 61  IVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A +  + M   P TR   +  L+ E+ R  D  +A+ YA +A
Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYAAEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A + + 
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +   A++++KL  + + A++ A + L  +N  RKA  I+E  WK  PHPE+ 
Sbjct: 238 HEAGEPETATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELG 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y +L   ++   +L RA  L +++    ES +++++ A E     +A       +   
Sbjct: 298 KVYLNLRTGDSARDRLARAETLAKLSSWDPESRLVIAQAASESKDFARAREVLAPLVDDR 357

Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P   +  ++A+IE A    ++ +   W   A  A  DP W++ DG +S  W P+SP++  
Sbjct: 358 PTSRVCRMMARIEAAEHGADSGRSREWLARAARAPRDPAWVA-DGVVSERWAPVSPVTGR 416

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474
           L  F WK P +       E+ +  +  +                 +P+    +     + 
Sbjct: 417 LDAFVWKTPPEI--LAGPEDDDAPVPASP---------EPTAPAAIPASSGPAPITTDSP 465

Query: 475 HPLDP 479
            P  P
Sbjct: 466 APSTP 470


>gi|23502736|ref|NP_698863.1| hypothetical protein BR1884 [Brucella suis 1330]
 gi|254704899|ref|ZP_05166727.1| hypothetical protein Bsuib36_13470 [Brucella suis bv. 3 str. 686]
 gi|23348752|gb|AAN30778.1| conserved hypothetical protein [Brucella suis 1330]
          Length = 523

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|91974947|ref|YP_567606.1| HemY-like [Rhodopseudomonas palustris BisB5]
 gi|91681403|gb|ABE37705.1| HemY-like [Rhodopseudomonas palustris BisB5]
          Length = 588

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 121/502 (24%), Positives = 220/502 (43%), Gaps = 21/502 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR+I +  +I+L       V+  P DV ++W +        V +  L   + + +L +A
Sbjct: 1   MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNDWRAEMRLPVFVLGLGAAIVSIVLAWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P+ +     +R   +   A+  GL+++   +   AR   S   +     ++ 
Sbjct: 61  IITGLWRAPSRMKRGRFERRSGRARHAITQGLLAVGHGDAAAARNHASAARRHA--PHDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  E   + A      M     T+   +  LY E+ R  D   A   A +A
Sbjct: 119 LALLLQAQSAQLEGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRADDPYGALAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L + P++ W ++AV+       +WS A+  L     +     K + R RA+LL AR+++ 
Sbjct: 179 LRLQPNSTWASQAVLGFRCARADWSGALDILETNLSSGLVDKKVFRRQRAVLLTARAIDL 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D   +   A+E+ KL    I A++ AAK L   ++ R+A  ++E  W+  PHP++A
Sbjct: 239 ED-SDESLARDSALEANKLAPTLIPAAVLAAKCLAETHQVRRAMKVIEAAWQAQPHPDLA 297

Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y ++   +    +L R   L   N    ES + +++  ++ G   +A           
Sbjct: 298 AAYANIKPGDPANIRLARVQNLIAKNPADFESALAIARAGIDAGEFSRARRALQ-PFIDN 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE     +T K   WT  A+ A+PD +W + DGY S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDAMWTA-DGYTSDHWRPVSPVTGRL 415

Query: 416 CYFEWKIPTKSPEYISS----------ENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
             F+W++P  +     +            I  S   A PA +    +    ++ + +   
Sbjct: 416 DAFQWQVPIAALPARKAVVIEDNPFHDALIASSATEALPAANAHDPVTVTIESVVETTVV 475

Query: 466 VSSFEDSTIHPLDPHIRQPDDP 487
                ++T+  ++P     D P
Sbjct: 476 APKQAEATVVTVEPEAAA-DKP 496


>gi|237816247|ref|ZP_04595240.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260755565|ref|ZP_05867913.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260758788|ref|ZP_05871136.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260760512|ref|ZP_05872855.1| HemY domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884589|ref|ZP_05896203.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68]
 gi|261214836|ref|ZP_05929117.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|261323831|ref|ZP_05963028.1| HemY domain-containing protein [Brucella neotomae 5K33]
 gi|261751032|ref|ZP_05994741.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513]
 gi|237788314|gb|EEP62529.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260669106|gb|EEX56046.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260670944|gb|EEX57765.1| HemY domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675673|gb|EEX62494.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260874117|gb|EEX81186.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68]
 gi|260916443|gb|EEX83304.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|261299811|gb|EEY03308.1| HemY domain-containing protein [Brucella neotomae 5K33]
 gi|261740785|gb|EEY28711.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513]
          Length = 525

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 481 VIVPAAEPVSA-DEP 494


>gi|306842962|ref|ZP_07475596.1| HemY domain protein [Brucella sp. BO2]
 gi|306286890|gb|EFM58415.1| HemY domain protein [Brucella sp. BO2]
          Length = 523

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 232/495 (46%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHAHARAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 ATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +            +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEIKAVAPISAPELEPVHETAAPVSARDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|225628086|ref|ZP_03786121.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|261217713|ref|ZP_05931994.1| HemY domain-containing protein [Brucella ceti M13/05/1]
 gi|261220938|ref|ZP_05935219.1| HemY domain-containing protein [Brucella ceti B1/94]
 gi|261315072|ref|ZP_05954269.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261316370|ref|ZP_05955567.1| HemY domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261321440|ref|ZP_05960637.1| HemY domain-containing protein [Brucella ceti M644/93/1]
 gi|261758825|ref|ZP_06002534.1| HemY domain-containing protein [Brucella sp. F5/99]
 gi|265987442|ref|ZP_06099999.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1]
 gi|265996898|ref|ZP_06109455.1| HemY domain-containing protein [Brucella ceti M490/95/1]
 gi|225616911|gb|EEH13958.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|260919522|gb|EEX86175.1| HemY domain-containing protein [Brucella ceti B1/94]
 gi|260922802|gb|EEX89370.1| HemY domain-containing protein [Brucella ceti M13/05/1]
 gi|261294130|gb|EEX97626.1| HemY domain-containing protein [Brucella ceti M644/93/1]
 gi|261295593|gb|EEX99089.1| HemY domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261304098|gb|EEY07595.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261738809|gb|EEY26805.1| HemY domain-containing protein [Brucella sp. F5/99]
 gi|262551366|gb|EEZ07356.1| HemY domain-containing protein [Brucella ceti M490/95/1]
 gi|264659639|gb|EEZ29900.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1]
          Length = 525

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFPHPDIA 301

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 481 VIVPAAEPVSA-DEP 494


>gi|306844854|ref|ZP_07477437.1| HemY domain protein [Brucella sp. BO1]
 gi|306274786|gb|EFM56567.1| HemY domain protein [Brucella sp. BO1]
          Length = 523

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 132/495 (26%), Positives = 232/495 (46%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +    +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDAAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +            +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEIKAVAPISAPEMEPVHETAAPVGAPDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|62290741|ref|YP_222534.1| hypothetical protein BruAb1_1861 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700652|ref|YP_415226.1| hypothetical protein BAB1_1884 [Brucella melitensis biovar Abortus
           2308]
 gi|148559352|ref|YP_001259709.1| hypothetical protein BOV_1812 [Brucella ovis ATCC 25840]
 gi|163843908|ref|YP_001628312.1| HemY domain-containing protein [Brucella suis ATCC 23445]
 gi|189024954|ref|YP_001935722.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19]
 gi|254690029|ref|ZP_05153283.1| hypothetical protein Babob68_07641 [Brucella abortus bv. 6 str.
           870]
 gi|254694518|ref|ZP_05156346.1| hypothetical protein Babob3T_07639 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696143|ref|ZP_05157971.1| hypothetical protein Babob28_00127 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254700528|ref|ZP_05162356.1| hypothetical protein Bsuib55_06701 [Brucella suis bv. 5 str. 513]
 gi|254731061|ref|ZP_05189639.1| hypothetical protein Babob42_07671 [Brucella abortus bv. 4 str.
           292]
 gi|256059861|ref|ZP_05450048.1| hypothetical protein Bneo5_05852 [Brucella neotomae 5K33]
 gi|256258283|ref|ZP_05463819.1| hypothetical protein Babob9C_13253 [Brucella abortus bv. 9 str.
           C68]
 gi|260546004|ref|ZP_05821744.1| HemY domain-containing protein [Brucella abortus NCTC 8038]
 gi|297247127|ref|ZP_06930845.1| HemY protein [Brucella abortus bv. 5 str. B3196]
 gi|62196873|gb|AAX75173.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616753|emb|CAJ11840.1| unnamed protein product [Brucella melitensis biovar Abortus 2308]
 gi|148370609|gb|ABQ60588.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|163674631|gb|ABY38742.1| HemY domain protein [Brucella suis ATCC 23445]
 gi|189020526|gb|ACD73248.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19]
 gi|260096111|gb|EEW79987.1| HemY domain-containing protein [Brucella abortus NCTC 8038]
 gi|297174296|gb|EFH33643.1| HemY protein [Brucella abortus bv. 5 str. B3196]
          Length = 523

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|254707585|ref|ZP_05169413.1| hypothetical protein BpinM_11596 [Brucella pinnipedialis
           M163/99/10]
 gi|254708877|ref|ZP_05170688.1| hypothetical protein BpinB_01173 [Brucella pinnipedialis B2/94]
 gi|254713700|ref|ZP_05175511.1| hypothetical protein BcetM6_10155 [Brucella ceti M644/93/1]
 gi|254715950|ref|ZP_05177761.1| hypothetical protein BcetM_05867 [Brucella ceti M13/05/1]
 gi|256030403|ref|ZP_05444017.1| hypothetical protein BpinM2_07105 [Brucella pinnipedialis
           M292/94/1]
 gi|256158386|ref|ZP_05456284.1| hypothetical protein BcetM4_05995 [Brucella ceti M490/95/1]
 gi|256253805|ref|ZP_05459341.1| hypothetical protein BcetB_05837 [Brucella ceti B1/94]
 gi|260169312|ref|ZP_05756123.1| hypothetical protein BruF5_13330 [Brucella sp. F5/99]
          Length = 523

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|161619801|ref|YP_001593688.1| HemY domain-containing protein [Brucella canis ATCC 23365]
 gi|161336612|gb|ABX62917.1| HemY domain protein [Brucella canis ATCC 23365]
          Length = 523

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 134/495 (27%), Positives = 236/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +Q + + E 
Sbjct: 61  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSYQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|256370285|ref|YP_003107796.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915]
 gi|256000448|gb|ACU48847.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915]
          Length = 523

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 134/495 (27%), Positives = 235/495 (47%), Gaps = 11/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 1   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P ML   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 61  LVKSLVQSPYMLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418

Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             FEWK+P         +    I   L        + +      +     +      E  
Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478

Query: 473 TIHPLDPHIRQPDDP 487
            I P    +   D+P
Sbjct: 479 VIVPAAEPVSA-DEP 492


>gi|146337456|ref|YP_001202504.1| putative signal peptide;putative HemY porphyrin biosynthesis
           protein [Bradyrhizobium sp. ORS278]
 gi|146190262|emb|CAL74256.1| conserved hypothetical protein; putative signal peptide;putative
           HemY porphyrin biosynthesis protein [Bradyrhizobium sp.
           ORS278]
          Length = 644

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 111/474 (23%), Positives = 202/474 (42%), Gaps = 10/474 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ +  ++ L       V+    DV + WG      +  V +  L   + A +L++ 
Sbjct: 1   MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLALGLTIAACVLVWN 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L  P  +     +R + +G  A+  GL++I   +   AR+            ++ 
Sbjct: 61  LLSALLRAPNRIRKAHRERRHRRGRHAITHGLLAIGHGDSTAARQHADMAK--RLAGDDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  E   + A      M +   TR   +  L+ E+ R  D  +A   A +A
Sbjct: 119 LTLLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFIEAQRADDAMAAVVIADEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236
           L ++P+A W + AV+       +W+ A++ L+        +   + R R +LL AR++  
Sbjct: 179 LKLAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMA- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +   +   A+E++KL    + A++ AAK     ++ R+A  I+E  W   PHP++A
Sbjct: 238 LETENRDLARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCPHPDLA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H+   ++ V +L R   L       VE  + V++ A++     +A A         
Sbjct: 298 DAYAHVRLGDSAVQRLSRITNLAARTPNHVEGALAVARAAIDAAEFGRARAAL-APFTED 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A++E+    +  K   WT  A+ A  DP W + DGY+S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTA-DGYVSDRWRPISPVTGRL 415

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469
             F+W+ P  S     +  I  S                      P     +  
Sbjct: 416 DAFQWQTPVASLPSERNSVIESSEFAEAILAPPSRPAIPEGLVEPPRTVPAAPV 469


>gi|300024948|ref|YP_003757559.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526769|gb|ADJ25238.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 577

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 121/492 (24%), Positives = 226/492 (45%), Gaps = 13/492 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ Y   I+L+      ++  P  + I W      TS F  + +L   + + + L++
Sbjct: 1   MVRLVVYLVTIALIASGLAWLADRPGTLQIAWQGYDIETSVFRAVVLLAAAVASIVFLWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R   + PA +   L +R   KG  A+ +GL++I A +  LA +    +  + +  +E 
Sbjct: 61  VFRALWNSPAAIGGRLVQRRQRKGLDAVSSGLIAIGAGDSTLASRF--ALQARKSLPHEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L +LL  Q A        A    E ML  P T    +  L+ E+   G   +A+++A +A
Sbjct: 119 LTHLLRAQSAELSGDRATARRIYEAMLASPETELLGLRGLFLEAQHQGADEAARQFADRA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L  +P   W   A+ +Q    K+W+ A+  L   +KN      + +R RA+LL A++ +N
Sbjct: 179 LKANPKLGWSATALFEQQCKQKDWTGALETLQHARKNGHIAKADADRKRAVLLTAKA-QN 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++     +   A+E+  L  + + A+  A + L S+    KA  +L+K W  +PHP++A
Sbjct: 238 VEEDSPDRALTLAMEAHALAPDLVPAAAIAGRILASRGNTAKAAKVLQKTWAKSPHPDLA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +    ++T  +  R  +L  +N  S+ES + V+  A+E    D+A       +   
Sbjct: 298 SAYAYARVGDSTRDRFDRERQLAALNPHSIESPIAVATAAIEARMYDEARRVLEPLLPER 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
             + +  L+A+IE  ++ +  ++  W   A++A  DP WI+ DG +S  W P SP+   L
Sbjct: 358 LTQRVATLMARIEAGDNGDKGRVREWLARAMNAARDPAWIA-DGVISDHWEPTSPVDGRL 416

Query: 416 CYFEWKIPTKSPEYISSENINFSLE----MAYPADDLQSMLNNGKKNHLPSIKKVSSFED 471
             F+W++P ++ +   +E +   +E    +  P    ++            +        
Sbjct: 417 DAFQWRVPVETRDATRNEILARRIEELIAIEAPTVAPEAPSREAATEAGADVIDAEPVTV 476

Query: 472 STIHPLDPHIRQ 483
           +      P  R 
Sbjct: 477 TAKPAPLPEERA 488


>gi|13473574|ref|NP_105142.1| hypothetical protein mll4218 [Mesorhizobium loti MAFF303099]
 gi|14024324|dbj|BAB50928.1| mll4218 [Mesorhizobium loti MAFF303099]
          Length = 531

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 147/520 (28%), Positives = 247/520 (47%), Gaps = 30/520 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  V+  +   F  ++  P D+ +T+    Y+ S  V    +   + A ++L+ 
Sbjct: 1   MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   + P  +      R  D+GY+AL TG+++  A +  LARK     ++      E 
Sbjct: 61  LIRSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E  +  A +K E ML  P  R   +  LY E+ R+GD N+A+ YA +A
Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
             ++P   W  E+ +++     +W  A+  ++ +    +      NR RA+LL A++   
Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D  A+   A+E+ KL  +   A++ AA +L  QN  RK   ILE  W+  PHPEIA
Sbjct: 241 AD-SDPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +YTH    + V  +L RA +L+E+ K   ES + V++ AL+      A ++A  A+++ 
Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  +LLLA IE+A + +  K+      A+ A  DP W++ DG +S  W P+SP++  L
Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418

Query: 416 CYFEWKIPTKS-----PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470
             FEW+ P +              +     +A PA +              +  K +   
Sbjct: 419 DAFEWRAPMERLGQLIDSRDEGTTVPVIEALAKPASEKPIDAIEPVAAGSETTGKGTDRS 478

Query: 471 DS------------------TIHPLDPHIRQPDDPGIKEQ 492
           +                    + P +   R PDDPG+   
Sbjct: 479 EDQVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGVDPD 518


>gi|89056574|ref|YP_512025.1| HemY-like [Jannaschia sp. CCS1]
 gi|88866123|gb|ABD57000.1| HemY-like protein [Jannaschia sp. CCS1]
          Length = 509

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 96/498 (19%), Positives = 186/498 (37%), Gaps = 17/498 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWIL-- 57
           +L++I +  ++   +    +++      + I +G     T    ++  +   L  WIL  
Sbjct: 6   LLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAVWILFK 65

Query: 58  ----LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
               L A  R        L     +R+  KGY AL   +M++AA    LA +       +
Sbjct: 66  VVGLLVAFLRMLNGDETALTRYWSRRSERKGYDALGDAMMALAAGEGRLAIR--KAERAR 123

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L  L+  Q A       +A E  + M+    TR   V  L  +    GD ++A
Sbjct: 124 KALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDDRTRFVGVRGLMQQRLDDGDTDTA 183

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A KAL + P    V   ++      ++W  A   L    K          R  A+L 
Sbjct: 184 LKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDAVLA 243

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A + +   +G ++ +  D  E+ +L    + A++ + +  +    KR+A   + K W  
Sbjct: 244 LAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKAWDQ 303

Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  +  + T   +L+R   L   +    E  ++ +++ +       A    
Sbjct: 304 APHPDLAAAFALIEPDETPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAARKAL 363

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
               + AP      ++A +E+        +  W   A+ A     W+ D+ G++   W P
Sbjct: 364 GDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARAVTAPRGNQWLCDNCGHVHEDWTP 423

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +    ++    +W  P +S   ++       L +    D  QS          P  ++ +
Sbjct: 424 VCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALED--QSDAPEAAPEAGPDAEEEA 481

Query: 468 SFEDSTIHPLDPHIRQPD 485
              D T    +     PD
Sbjct: 482 EILDDTPAEPEAAQVTPD 499


>gi|90421577|ref|YP_529947.1| HemY-like [Rhodopseudomonas palustris BisB18]
 gi|90103591|gb|ABD85628.1| HemY-like [Rhodopseudomonas palustris BisB18]
          Length = 561

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 127/536 (23%), Positives = 228/536 (42%), Gaps = 49/536 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR+I +  VI+        ++  P +V ++W       +  V    L   + A  L + 
Sbjct: 1   MLRIILFLVVIAAAAAGAGWLAEQPGNVVLSWRGWQAEMTLAVAALALLSAIVAVALGWT 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L  P  L      R   +  +A+  GL+++   +  +AR   +   +      + 
Sbjct: 61  ILAGVLRSPGRLRRSRRARREARARRAITQGLLAVGHGDAAIARAHANAAKRHA--PQDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  +   + A      M     T+   +  L+ E+ R  D  +A   A +A
Sbjct: 119 LALLLQAQSAQLDGDRDGAKRAFLAMAGRDDTKSLGMRGLFIEAQRAEDPYAALTIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
           L +SP + W ++AV+       +WS A+  L         + K + R R +LL AR++E 
Sbjct: 179 LRLSPASSWASQAVLGFRCARGDWSGALEILETNLTSGLIDKKTYRRLRGVLLTARAIEC 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ D+  S   A+E++KL    + A++ A+K L   ++ R+A   +E  W  +PHP++A
Sbjct: 239 -EETDVSLSRDSALEAVKLAPTLVPAAVLASKYLSEAHQIRRAMKTIETAWLAHPHPDLA 297

Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y H+   ++   +L+R   L        E  V V++ A++ G  ++A    M     A
Sbjct: 298 EAYAHIKPGDSAQVRLQRVEALAAKASGDTEGAVAVARAAIDAGDFNRARGALM-PFVDA 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE     ++     WT  A+ A+ DP+W + DG +S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHTERKDSRSARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPVTGRL 415

Query: 416 CYFEWKIPT--------------------------KSPEYISSENINFSLEMAYP----- 444
             F+W  P                           +  E ++SE     +  A P     
Sbjct: 416 DAFQWTTPLAELPTNKAVVLESDLFDETLIESPTEEVTEGVTSEPATPEVSKAEPSKPET 475

Query: 445 -ADDLQSMLNNGKKNHLPSIKKVSS-------FEDSTIHPLDPHIRQPDDPGIKEQ 492
               ++ ++ +      P +    S        + S   P+ P +R PDDPGI E 
Sbjct: 476 SGTPVEVVMESKPAAEAPVVGPTESSPPLFHRPQRSAAAPVIPIVRAPDDPGIDED 531


>gi|114705598|ref|ZP_01438501.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506]
 gi|114538444|gb|EAU41565.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506]
          Length = 522

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 130/488 (26%), Positives = 230/488 (47%), Gaps = 11/488 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++ +F +I  +   F  ++  P  V+  W  +    S  + L+     + A +L+  
Sbjct: 1   MWGILTFFILILALYLGFGWLADNPGSVTFVWQEQTVEFSMILFLAAAAAVIVASVLVVW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P ++      R + KG+  L  G+++  A N  LAR+M      +    +  
Sbjct: 61  LVAKLFQAPGLISSWNSSRRHSKGHNYLSRGVLAAGAGNATLARQMIKKSEGRIGKDDRA 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           ++  L+ Q AL E  +  A      M + P T+  A+  LY E+ R+GD ++ + YA +A
Sbjct: 121 ILGFLDAQTALIEGDHQRAVAIFRDMEEDPNTKLLALRGLYLEAKRVGDESAQEYYAERA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
           L I+P+ PW  EAV+++   +++W  A+  L  ++       K+  R RAILL A++ + 
Sbjct: 181 LRIAPNLPWAAEAVLERKSSSRDWDGALRVLEAQRSIDMLGDKDAKRIRAILLTAKAKDQ 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D  A+   A  + K+  + + A++ AA +    N  R+A   LE  W   PHPEIA
Sbjct: 241 AD-ADPKAARSSARSAQKIAPDFVPAALVAAAAATRLNDSRRATRYLETTWVNAPHPEIA 299

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H    ++   +L+RA +L+ + ++  ES + V++ AL+ G  D A + A+ A +  
Sbjct: 300 DAYVHAKAGDSAKDRLRRAQKLKGLYEKHPESDIAVARAALDAGEHDLARSSALDAAQKR 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + ++LLLA IE+  S    ++  W   A+ A  DP+W++ DG +   W P+SP+++ L
Sbjct: 360 PTESVYLLLADIEEEQSGEVGRVREWLAKAITAPRDPVWMA-DGVILDEWQPVSPVTRKL 418

Query: 416 CYFEWKIPTKSPEYISSENINFSL----EMAYPADDLQSMLNNGKKNHLPSIKKVSSFED 471
              EWK P +  +   +  I        E A           +    H PS    +    
Sbjct: 419 GVVEWKSPVEHRDSNGNPVIEARARDHGESARIISSSDGSNASAASAHTPSTAMTTVASS 478

Query: 472 STIHPLDP 479
           +      P
Sbjct: 479 TLNGNPRP 486


>gi|294851122|ref|ZP_06791795.1| HemY protein [Brucella sp. NVSL 07-0026]
 gi|294819711|gb|EFG36710.1| HemY protein [Brucella sp. NVSL 07-0026]
          Length = 480

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 126/429 (29%), Positives = 220/429 (51%), Gaps = 7/429 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++++ +    Y  S    ++ +   + A +LL+ 
Sbjct: 3   MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L   L  R  D+GY++L TGL++  A +   AR+M     +  +   E 
Sbjct: 63  LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M++ P TR   +  LY E+ R+G   +A+ YA +A
Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q     +W  A+  ++ +++          + RA LL A+++  
Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A+E+ KL  + + A++ AA++L +  + RK   ILE  WK  PHP+IA
Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ A
Sbjct: 302 STYIYARSGDTAQDRLKRARHLVLLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+   W P+SP++  L
Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420

Query: 416 CYFEWKIPT 424
             FEWK+P 
Sbjct: 421 NSFEWKVPV 429


>gi|27375675|ref|NP_767204.1| hypothetical protein bll0564 [Bradyrhizobium japonicum USDA 110]
 gi|27348813|dbj|BAC45829.1| bll0564 [Bradyrhizobium japonicum USDA 110]
          Length = 580

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 121/498 (24%), Positives = 221/498 (44%), Gaps = 19/498 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +I+L       V+  P D+ +T G     T+    + +L  F  A +L+++
Sbjct: 1   MLRIVLFLVLIALAAAGAAWVADQPGDLVLTAGGFRASTTLPRFVFLLGLFAAAVVLVWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P  L    H++ + +G  A+  GL++I   +  LAR+     + +    N+ 
Sbjct: 61  ILTTIWRTPGRLRRRSHEKRHARGRHAITHGLLAIGHGDTALARR--HAETARRHAPNDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  E   + A      M +   TR   +  L+ E+ R  D   A   A +A
Sbjct: 119 LALLLHAQSAQLEGNRDEAQRAFRAMAEREDTRLLGLRGLFIEAQRADDAVGAVMIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236
           + +SP + W + AV+       +WS A+  L+        +   + R R +LL AR+LE 
Sbjct: 179 IKLSPSSTWASHAVLGFRCARGDWSGALAILDSNLSAGLIDKPAYRRQRGVLLTARALE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               D   +    +E++KL    + A++ AAK     ++ R+A  ++E  W  NPHP++A
Sbjct: 238 LQTMDRDVARESVMEAIKLAPTLVPAAVLAAKFESEAHQVRRAMKLVEAAWLANPHPDLA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             Y H+   ++   +L+R   L           +E  + +++ A++     +A A     
Sbjct: 298 EAYAHVKLGDSARQRLQRVETLAAKTPADKAGHIEGQLALARAAIDASEFSRARAVLAPY 357

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
           +   P + + LL+A+IE+    +  +   WT  A+ A  DP W + DGY+S  W P+SP+
Sbjct: 358 VN-DPTQRVALLMAEIERTEHGDGGRARAWTLRAVRARHDPAWTA-DGYVSDRWRPVSPV 415

Query: 412 SKTLCYFEWKIPTKSPE-----YISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
           +  L  F+W+ P  S        I S     ++  A P   + +  N+      P+    
Sbjct: 416 TGRLDAFQWQTPVASLPSDKGDLIESSAFEEAMLAAPPPKRVTAPANDTLMEPAPAASVP 475

Query: 467 SSFEDSTIHPLDPHIRQP 484
           +  ++S     +    +P
Sbjct: 476 AEQDNSPPAAKEEPKEEP 493


>gi|239833008|ref|ZP_04681337.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|239825275|gb|EEQ96843.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301]
          Length = 480

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 120/412 (29%), Positives = 208/412 (50%), Gaps = 7/412 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ Y  +++ +   F  ++  P ++ +T+    Y       ++ +   + A ++L+ 
Sbjct: 1   MLRVLFYLVIVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAILILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +  P  L      R  D+GY++L TGL++  A +   AR+M     Q  +   E 
Sbjct: 61  LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGQLLSSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q A+ E +   A +  E M+  P TR   +  LY E+ R+G  ++A+ YA +A
Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGAHDAARHYAAEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
              +P   W + AV+ Q+    +W  A+  ++ +K+          + RA LL A+++  
Sbjct: 181 AAQAPQLEWASSAVMGQFCAEGDWDAALKLVDARKQALSHSKDVVKKERAALLTAKAMAV 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D   +   A+E+ KL  + + A++ AA++L S    RK   ILE  WK  PHP+IA
Sbjct: 241 VDV-DHAQARTLALEANKLAPDLVPAAVVAARALFSDGDIRKGSKILEAAWKRFPHPDIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +  S +T   +LKRA  L  +   + E  + +++ A E G    A   A   ++ +
Sbjct: 300 STYVYARSGDTAQDRLKRAKHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLP 407
           PR+  +LLLA IE+A + +  K+  W   A+ A  DP W + DGY+S  W P
Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSP 410


>gi|119384727|ref|YP_915783.1| HemY domain-containing protein [Paracoccus denitrificans PD1222]
 gi|119374494|gb|ABL70087.1| HemY domain protein [Paracoccus denitrificans PD1222]
          Length = 596

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 103/499 (20%), Positives = 194/499 (38%), Gaps = 24/499 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLFA 60
           L+++ +F ++ ++    + +S     +S+ +G+  Y   P  ++++ L   L  WI +  
Sbjct: 22  LKILIFFAIVLVLTLGAMQLSETGHGLSMVYGSTEYTLGPVQLVIAALVVVLLGWITVRL 81

Query: 61  VSRFFLS------CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114
           +  F             +     +    KGY AL  G++++A+    LA+   +  ++  
Sbjct: 82  LGLFLAFLRFLLGDETAINRYFARSRERKGYDALSEGMLAVASGEGKLAQDKAAKAAKFL 141

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
              +  +  LL  Q A        A E    +L  P TR   +  L  +    GD  +A 
Sbjct: 142 DKPH--VTDLLAAQAAEVAGDSRKAGEVYRRLLSDPRTRFVGIRGLMRQKLDEGDTVTAL 199

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLI 230
           + A KA  + P    V + ++Q      +W  A   L  K++  +       R  A+L +
Sbjct: 200 KLAEKAYALKPKHAEVQDTLLQLQTRQGDWKGARAVLKDKRQQGQLPKDVHIRRDAVLAL 259

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
             + E    G+ I++   AI + +   + I A++ AA+S I+QN  R A  +L+K W V 
Sbjct: 260 KEASEVLAHGNSISAREAAISANRASPDLIPAAVLAARSYIAQNDPRNAGRVLQKTWSVR 319

Query: 291 PHPEIANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           PHP IA  Y  ++ +     +L+R   L   N +  E+ ++ +++ L       A     
Sbjct: 320 PHPSIAATYAEIVPDEKPAARLRRFEDLMRQNPDHEETRLLRAELLLAAEDFPGARRALG 379

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLPL 408
              +  P      +LA +E+    +   +      AL A   P W+ D  + + + W P 
Sbjct: 380 DLAEKHPTVRSLSILAAVERGEGGDDAVVRGILARALVASRGPQWVCDKCHNVMADWSPT 439

Query: 409 SPISKTLCYFEWKIP--TKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
                      W  P         S+      L +  P         NG    +P+    
Sbjct: 440 CDSCGGFDTLTWCEPDTPAWGATASNGVEMLPLLVGAPHG-------NGAGADVPAPPVP 492

Query: 467 SSFEDSTIHPLDPHIRQPD 485
           ++   +T     P    P+
Sbjct: 493 AAQARATPPVPQPEAPAPE 511


>gi|39933335|ref|NP_945611.1| HemY-like [Rhodopseudomonas palustris CGA009]
 gi|39652960|emb|CAE25702.1| unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 565

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 129/543 (23%), Positives = 243/543 (44%), Gaps = 56/543 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +I+L       V+  P +V ++W +     +  V   ++   + A +L +A
Sbjct: 1   MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  P  +      R   +   A+  GL+++   +   AR +H+  +++H  H+  
Sbjct: 61  IILGVVRAPGWMKRGRSSRRSARARNAITQGLLAVGHGDSSTAR-LHANAARRHAPHD-P 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  E     A      M     T+   +  LY E+ R  D  +A   A +A
Sbjct: 119 LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L + P+  W ++AV+       +W+ A+  L +         K + R RA+LL AR+++ 
Sbjct: 179 LRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTARAID- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ D   +   A+E+ KL    + A++ AAK L   ++ R+A  ++E  W+  PHP++A
Sbjct: 238 LEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPHPDLA 297

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +L   +T   +L R   L     + +ES + +++ A++ GS  +A       + + 
Sbjct: 298 STYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPYLDM- 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE  +  +T K   WT  A+ A+ DP+W + DGY+S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415

Query: 416 CYFEWKIPTKS--------------------------PEYISSENINFSLEMAYPA---- 445
             F+W++P  +                          P   +SE +  ++E A  A    
Sbjct: 416 DAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAPEAPIVA 475

Query: 446 -DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQPDDPGI 489
             +  +++    K   P+    +                       P+ P +R PDDPG+
Sbjct: 476 PKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRAPDDPGV 535

Query: 490 KEQ 492
            E 
Sbjct: 536 DED 538


>gi|192288690|ref|YP_001989295.1| HemY domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192282439|gb|ACE98819.1| HemY domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 565

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 129/543 (23%), Positives = 244/543 (44%), Gaps = 56/543 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +I+L       V+  P +V ++W +     +  V   ++   + A +L +A
Sbjct: 1   MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  P+ +      R   +   A+  GL+++   +   AR +H+  +++H  H+  
Sbjct: 61  IILGVVRAPSWMKRGRSSRRSARARNAITQGLLAVGHGDSGTAR-LHANAARRHAPHD-P 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  E     A      M     T+   +  LY E+ R  D  +A   A +A
Sbjct: 119 LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L + P+  W ++AV+       +W+ A+  L +         K + R RA+LL AR+++ 
Sbjct: 179 LRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTARAID- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ D   +   A+E+ KL    + A++ AAK L   ++ R+A  ++E  W+  PHP++A
Sbjct: 238 LEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPHPDLA 297

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +L   +T   +L R   L     + +ES + +++ A++ GS  +A       + + 
Sbjct: 298 STYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPYLDM- 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE  +  +T K   WT  A+ A+ DP+W + DGY+S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415

Query: 416 CYFEWKIPTKS--------------------------PEYISSENINFSLEMAYPA---- 445
             F+W++P  +                          P   +SE +  ++E A  A    
Sbjct: 416 DAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAPEAPIVA 475

Query: 446 -DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQPDDPGI 489
             +  +++    K   P+    +                       P+ P +R PDDPG+
Sbjct: 476 PKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRAPDDPGV 535

Query: 490 KEQ 492
            E 
Sbjct: 536 DED 538


>gi|92116186|ref|YP_575915.1| HemY-like [Nitrobacter hamburgensis X14]
 gi|91799080|gb|ABE61455.1| HemY-like protein [Nitrobacter hamburgensis X14]
          Length = 552

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 123/528 (23%), Positives = 228/528 (43%), Gaps = 41/528 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R+I +  +I+L       V+     + ++W      T+       L   + A +L+++
Sbjct: 1   MFRIILFLVLIALAALGATWVADQTGTIVMSWDVWRVETTLPAFALGLGLLVVAVLLVWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +R   +G  A+  GL++I   +   AR        +    +E 
Sbjct: 61  IVRGLWQAPRRIRRARRERRNRRGRDAITRGLLAIGHGDAAAAR--THARVARRLVSHEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  +   + A      M +   TR   +  L+ E+ R  D  +A   A +A
Sbjct: 119 LTLLLHAQSAQLDGDADRAQRAFRAMAERADTRLLGLRGLFIEAQRADDPQAAVAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
           L +SP + W ++A +       +W+ A+  L++       +   + R R +LL AR+LE 
Sbjct: 179 LKVSPSSIWASQAALGFRCARGDWTGALAILDKNVAAGLIDKALYRRQRGVLLTARALE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +K D  AS +  +E++K     I A + A+K L   N+ R+A  I+E  W   PHP++A
Sbjct: 238 LEKSDRDASRNTVMEAVKYAPTLIPAVVLASKYLSEGNQMRRAMRIIETAWLAQPHPDLA 297

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H++  ++   +L R   L E      ES + +++ A++     +A       +  A
Sbjct: 298 DAYAHVMPGDSARERLARVETLAENASGHPESAMAIARAAIDASEFARAREVLEPLI-AA 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE     ++ +   WT  A+ A+ DP+W + DGY+S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHNEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415

Query: 416 CYFEWKI-----PTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470
             F+W+      P+  P  + +E  +     A   + L +   +  ++   +   + S  
Sbjct: 416 DAFQWQAPLAALPSSRPALVEAEFSDQIASDAPRFEALPAASQSAARDGDGATVAIESSS 475

Query: 471 DST--------------------------IHPLDPHIRQPDDPGIKEQ 492
             T                          I  +   +R PDDPG+ + 
Sbjct: 476 PETAAMSAEAATSTTFRTQSDLDKAGASDIPAVIAIVRAPDDPGVDDN 523


>gi|21328634|gb|AAM48640.1| conserved hypothetical protein [uncultured marine proteobacterium]
          Length = 491

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 93/488 (19%), Positives = 189/488 (38%), Gaps = 16/488 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +++++ +  ++ L+      +        I +              ++   L ++ L+  
Sbjct: 5   LVKILSFVAMVMLISFGAGRLMEAQGGFMIQYAGLELSFGALQAALLVLGLLVSFWLVLK 64

Query: 61  VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           +        RF       L     +    +G++AL  GLM++A+ +   A  M       
Sbjct: 65  LLGLVVALLRFINGDETALSRYFDRNRERRGFEALSDGLMALASGDGRDA--MAKARKAD 122

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +   L  L+  Q A+A      A    + +L+ P TR    Y L  +  + GD   A
Sbjct: 123 RLLNRPDLTNLIMAQAAVANGDRQTAKATYKKLLKDPKTRFVGTYGLLQQHLQDGDTEVA 182

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229
            + A  A  + P      + +++     ++W    T L  K K+         R  A+  
Sbjct: 183 LKLAEHAFGLKPRHGETQDVLLKLQAGREDWRGVRTTLTAKLKHGSLPKDVHKRRDAVFA 242

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +++S +   +G +  +   A+E+ +L    + A+I +A+    Q   ++A  IL   W++
Sbjct: 243 LSQSRDLRAEGKLDEAQIYAVEANRLAPGLVPAAILSAEGHREQKNVKQASRILRAAWQL 302

Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            PHP++A  +  L  +     +LKR  +  +  +   E+ ++++++ + M   D A    
Sbjct: 303 APHPDLAAGFAALAPDEASAARLKRFGQFTKGTESHPETKMLMAELYVAMADFDAARQAL 362

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407
               K  P      +LA IE+ +  +   +      A+ A  DP WI D+ G++   W P
Sbjct: 363 GDLAKTDPTMRALTILAAIERGDGADDQSVRRLLTQAISAQRDPQWICDNCGHVHHDWEP 422

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           +    + +    WK P  S E +S + +   +     +D+    L   +         V 
Sbjct: 423 VCLNCEAIDSIAWKRPPMS-EAVSPDMLPLIVGHMARSDEDFPPLLEPEDLSQADASAVK 481

Query: 468 SFEDSTIH 475
              D T  
Sbjct: 482 IAADDTPL 489


>gi|85713683|ref|ZP_01044673.1| HemY protein [Nitrobacter sp. Nb-311A]
 gi|85699587|gb|EAQ37454.1| HemY protein [Nitrobacter sp. Nb-311A]
          Length = 577

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 121/526 (23%), Positives = 229/526 (43%), Gaps = 40/526 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR+I +  +I+L       ++     + ++W      T+  V    L   + A +L+++
Sbjct: 27  MLRIILFLVLIALSALGASWIADQTGTIVLSWDVWRIETTLPVFALGLGLLVVASLLVWS 86

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P  L      R   +G  A+  GL++I   +   AR  +     +     + 
Sbjct: 87  AVRGLWQAPTRLRRARRARRTARGRDAITRGLLAIGHGDATAAR--NHARVARRLVSQDP 144

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  +   + A      M +   TR   +  L+ E+ R GD  +A   A +A
Sbjct: 145 LALLLHAQAAQLDGDADRAQRVFRTMAERADTRLLGLRGLFIEAQRAGDPAAAVAIAEEA 204

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
           L  SP + W ++A +       +W+ A+  L++     + +   + R R +LL AR+LE 
Sbjct: 205 LKTSPSSIWASQAALGFRCARGDWAGALAILDRNAASGRIDKALYRRQRGVLLTARALE- 263

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D   S    +E++K     + A + A+K L   N+ R+A  ++E  W   PHP++A
Sbjct: 264 LETSDRDLSRQTVMEAVKFAPTLVPAVVLASKYLSEANQMRRAMRMIETAWLAQPHPDLA 323

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H++  ++ + +L R  +L E      ES + +++ AL+     +A       +  A
Sbjct: 324 DAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAALDASEFARARDALEPLI-AA 382

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE +   ++ +   WT  A+ A+ DP+W + DGY+S  W P+SP++  +
Sbjct: 383 PTQRVAMLMAEIEHSEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRV 441

Query: 416 CYFEWKI-----PTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470
             F+W+      P+  P  + ++  +   E     + L +    G+          +  E
Sbjct: 442 DAFQWQTPLAALPSSRPPLVEADVSDQIAEETPRVEALPAASPGGESKAQDDAMSPADVE 501

Query: 471 DST-------------------------IHPLDPHIRQPDDPGIKE 491
            ++                         I  + P +R PDDPG+ +
Sbjct: 502 AASFGTIPMPDETAASPISHTEEDKPGAIPDVIPIVRAPDDPGVDD 547


>gi|304392696|ref|ZP_07374636.1| HemY domain-containing protein [Ahrensia sp. R2A130]
 gi|303295326|gb|EFL89686.1| HemY domain-containing protein [Ahrensia sp. R2A130]
          Length = 674

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 127/434 (29%), Positives = 217/434 (50%), Gaps = 13/434 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITW----GNRLYRTSPFVILSILYFFLFAWI 56
           MLRL  +F ++  +   F   +  P  +++ W    G         V + +L   LFA I
Sbjct: 1   MLRLAVFFLILFAIAAGFAWFADNPGTITLQWPWLNGGEPLAVDLLVAIVVLAVVLFAAI 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           +L+++    L+ P         R  DKGY+AL  GL++  A N PLAR++    S+    
Sbjct: 61  VLWSIIAAILTSPKTFGRWREGRRRDKGYEALSRGLVAANAGNAPLARRLTKECSKH--L 118

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            +E LV LL+ Q AL E  ++ A      ML+   TR   +  LY E+ + G+  +A  +
Sbjct: 119 DDEPLVALLDAQTALLEDDHDCARRCYTTMLEKDETRLLGLRGLYLEAEKEGEGEAAGHF 178

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232
           A +A+  +P  PW T+A+++     K W  A+  L+  +         +N  +A +L A 
Sbjct: 179 AREAVKANPGTPWATQAMLRSQTATKNWEEALKTLDLNRSAGVYDKDAYNGRKAAILTAL 238

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +++  D      +   A+ + KL      A++ AA+  +  N  RKA  +LE  WK  PH
Sbjct: 239 AMDEEDAS-PEKARSHALAAHKLAPTLAPAAVVAARMSVRLNDMRKAAKVLETSWKAEPH 297

Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           PEIA+ Y HL + ++V  +LKRA  L+     S++  + ++++A++ G  + A      A
Sbjct: 298 PEIADAYIHLRNGDSVLDRLKRAQTLDGKRSNSIDGQLAIAQVAIDAGEYETARDALEAA 357

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411
            +I P +   LL+A +E+A + +  ++  W   A+HA  D  W++ DG  +  W+P SP+
Sbjct: 358 FRITPTERACLLMADLEEAQNEDMGRVREWLSRAVHAPRDKAWVA-DGVAAEEWMPASPV 416

Query: 412 SKTLCYFEWKIPTK 425
           +  +  FEWK P +
Sbjct: 417 TGEINAFEWKQPVE 430


>gi|328542000|ref|YP_004302109.1| HemY N-terminal domain protein [polymorphum gilvum SL003B-26A1]
 gi|326411750|gb|ADZ68813.1| HemY N-terminal domain protein [Polymorphum gilvum SL003B-26A1]
          Length = 597

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 130/491 (26%), Positives = 224/491 (45%), Gaps = 9/491 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R + +F V+  V   F  ++  P  VS++W   ++   P V   ++   L   +L F 
Sbjct: 1   MIRALVFFAVLFAVAFGFAWMADLPGVVSVSWQGYVWEQPPVVAAVLIGLALVLVLLAFW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L  P +    L +R  DKGY+AL  GL+++   N   AR+      +      E 
Sbjct: 61  LVGAILRSPRIARRFLRRRRRDKGYEALSHGLIALGTGNAKRARRYGQDADK--LLRGES 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              LL  Q A    Q++ A ++ E ML+ P TR   ++ L+ E+ R  +  +A+ YA +A
Sbjct: 119 AARLLLAQAAQMSGQHDEARQRFEAMLKDPETRALGLHGLFIEAERQNEPIAARHYAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236
               P   W   AV+    +A +W  AI  L +    +  + K + R+RA+LL AR+LE 
Sbjct: 179 ARAVPGLDWAGRAVLGYQAVAGDWEAAIATLERNYAARLVDKKTYRRHRAVLLAARALEL 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D GD   +   A E+  L  + + A++ AA+    +   RKA  I+E  W+++PHP++A
Sbjct: 239 ED-GDPETALTLAKEAHGLALDLVPAAVVAARLATRKGDVRKAAKIVEATWRLSPHPDLA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H    +  + +L R   L      + E  + V++ ALE     +A  +    ++  
Sbjct: 298 DAYAHARIGDAALDRLARVRTLAAQRAHTAEGALAVARAALEAREFGEAREQLKRVLRSE 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P +  F+L+A++E+A   +  ++  W   A+ A  D  W++ DG +   W P+SP++  L
Sbjct: 358 PTRGAFVLMAELEEAEHGDRGRVREWLARAVRAPLDKAWVA-DGVVREAWAPVSPVTGRL 416

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475
             FEW  PT  PE    E ++ +L  A       +         +P     +    +   
Sbjct: 417 DAFEWTTPTGLPETPLVEALDDALFEAPALTVRPAAPKFDTPAEVPPAAGAAPEPAADAA 476

Query: 476 PLDPHIRQPDD 486
              P      D
Sbjct: 477 VSVPAAEPEPD 487


>gi|260464236|ref|ZP_05812429.1| HemY domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259030039|gb|EEW31322.1| HemY domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 533

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 140/489 (28%), Positives = 241/489 (49%), Gaps = 14/489 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  V+  +   F  ++  P D+ IT+    Y+ S  V    +   + A ++ + 
Sbjct: 1   MIRLLAFLVVVFALGLGFAWLADRPGDMVITFNGYQYQVSLMVAAVAVVAVVAAVMIAWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +   + P  +      R  D+GY+AL TG+++  A +  LARK     ++      E 
Sbjct: 61  LVKSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E  +  A +K E ML  P  R   +  LY E+  +GD N+A+ YA +A
Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAESLGDRNAARHYAGRA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
             ++P   W  E+ +++     +W  A+  ++ +    +      NR RA+LL A++   
Sbjct: 181 AVMAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D  A+   A+E+ KL  +   A++ AA +L  QN  RK   ILE  WK  PHPE+A
Sbjct: 241 AD-SDPNAARTAALEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILETAWKAEPHPEVA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +YTH    + V  +L RA +L+E+ K   ES + V++ AL+      A  +A  A+++ 
Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAMDFSTARREAEAAIRMD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  +LLLA IE+A + +  K+      A+ A  DP W++ DG +S  W P+SP++  L
Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418

Query: 416 CYFEWKIPTK-------SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
             FEW+ P +       S +      +     +A PA +  + +         +  K + 
Sbjct: 419 DAFEWRAPMERLGQLIDSRDETPGAAVPVIEALAKPASETPADVIEHAAASSEATGKAAE 478

Query: 469 FEDSTIHPL 477
             +  + P+
Sbjct: 479 SREDHVKPV 487


>gi|75674672|ref|YP_317093.1| HemY protein [Nitrobacter winogradskyi Nb-255]
 gi|74419542|gb|ABA03741.1| HemY protein [Nitrobacter winogradskyi Nb-255]
          Length = 555

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 121/530 (22%), Positives = 229/530 (43%), Gaps = 43/530 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR+I +  +I+L       ++     + ++W      T+  V    L   + A +L ++
Sbjct: 1   MLRIILFLVLIALSALGATWIADQTGTIVLSWDVWRIETTIPVFALGLGLLIVASLLAWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V       P  +     +R   +G  A+  GL++I   +       +   + +    N+ 
Sbjct: 61  VVHGLWQAPTRMRRARRERRIARGRDAITRGLLAIGYGDAAA--ARNHAKAARRLVSNDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  +   + A      M +   TR   +  L+ E+ R GD  +A   A +A
Sbjct: 119 LALLLHAQAAQLDGDADRAQRAFRTMAERNDTRLLGLRGLFIEAQRAGDPAAAVAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
           L  SP + W ++A +       +W+ A+  L++     + +   + R R +LL AR+LE 
Sbjct: 179 LKTSPSSIWASQAALGFRCARGDWTGALAILDKNVASGRIDKALYRRQRGVLLTARALE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +K D   S    +E++K     I A + A+K L   N+ R+A  ++E  W   PHP++A
Sbjct: 238 LEKSDRDLSRQTVMEAVKFAPTLIPAVVLASKYLSEANQMRRAMRLIETAWLAQPHPDLA 297

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y H++  ++ + +L R  +L E      ES + +++ A++     +A       +  A
Sbjct: 298 DAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAAIDASEFARAREVLEPLI-AA 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE     ++ +   WT  A+ A+ DP+W + DGY+S  W P+SP++  +
Sbjct: 357 PTQRVAMLMAEIEHNERGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPLTGRV 415

Query: 416 CYFEWKI-----PTKSPEYISSENINFSLEMAYPADDLQSMLNNG--------------- 455
             F+W+      P+  P  + +E  +   E A   + L +  +                 
Sbjct: 416 DAFQWQTPLSALPSSRPPLVEAEVSDQIAEDAPRVEALPAATSTEDFKAQDGAIPPAGVE 475

Query: 456 ---------KKNHLPSIKKVSSFEDST----IHPLDPHIRQPDDPGIKEQ 492
                          +    +  E+      I  + P +R PDDPG+ + 
Sbjct: 476 ASSSGTISMPDETATASADYTPSEEDNKPGAIPDVIPIVRAPDDPGVDDD 525


>gi|114769711|ref|ZP_01447321.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium
           HTCC2255]
 gi|114549416|gb|EAU52298.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium
           HTCC2255]
          Length = 478

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/472 (20%), Positives = 188/472 (39%), Gaps = 26/472 (5%)

Query: 12  SLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWI-------LLFAVSRF 64
           +LV     ++      +++ + +     +P   +  +   + + +       +L A+ +F
Sbjct: 16  ALVTLVTGVIIDAGGVITMQFASYEISLTPIQGIIGIILCMSSLLATKWLFGILVAIFKF 75

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
           F      +    +K   ++GYKAL   ++S+AA     A  +++    +       L  L
Sbjct: 76  FNGDETAITRYFNKNKEERGYKALADSMVSMAAGEGKDA--INNANRAERLLQRPQLTNL 133

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           +  Q A        A +  + +L+   TR   +  L  +    GD  +A   A KA  I 
Sbjct: 134 VSAQAAEKFGDNKRALKYYKRLLKNDQTRFVGLQGLLKQKLLEGDNETALLLAEKAFSIR 193

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLENADKG 240
           P+       +       ++W  A   +    +  K       R  AILL+A +    + G
Sbjct: 194 PNHDQTLNVLFDLQTEKQDWKGAQKTIKANVRAGKLPKDIGLRREAILLLADAKAMLEAG 253

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           ++      AI + K   + I A+I AA+  +  N KR +  IL+K W +NPHP++A  + 
Sbjct: 254 EIDTGKAAAIAANKSSPDLIPAAILAAEMYMLDNNKRASTKILKKTWGLNPHPDLATAFA 313

Query: 301 HLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +   E +  + KR     ++  E  E+ ++++++A+       A           P   
Sbjct: 314 EINLKETSGERRKRFSSFVKLKSEHYETKLLLAELAIGDEDFPAARRAIKDLTSTNPTVR 373

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYF 418
              L+A IE+    +   +  W   AL A   P WI +    +   W P     +T    
Sbjct: 374 SLALMAAIEKGEGADEKTVRAWLNKALTASRGPQWICEKCSNIHLSWQPRCENCETFDSL 433

Query: 419 EWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470
            WK P +  + I++E ++F+           + +  G +N LPS+  +   E
Sbjct: 434 SWKAPPRDAKKITNEKLDFT-----------AGILTGAENSLPSVSDIDDAE 474


>gi|217977723|ref|YP_002361870.1| HemY domain protein [Methylocella silvestris BL2]
 gi|217503099|gb|ACK50508.1| HemY domain protein [Methylocella silvestris BL2]
          Length = 516

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 120/495 (24%), Positives = 211/495 (42%), Gaps = 13/495 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  V+  +  +   +   P ++ + W      TS  + ++ ++      + L+ 
Sbjct: 1   MIRVLLFLAVLIGLAIAEAWLIERPGELVLNWQGYKIETSVLMGIAAVFVAAAILLGLWM 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + RF  + P+++      R  +KGY AL  G++++ A +   AR+  + V  Q    N+ 
Sbjct: 61  LLRFIFNIPSLMALASRGRRREKGYAALSRGMIAVGAGDTQAARR--AAVEAQRMLPNDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A    +   A      M +    R   +  L+ E+ R GD+  AQ YA  A
Sbjct: 119 LALLLKAQSAQLSGESGSAEAAFTEMTRRNDMRVLGLRGLHVEAERQGDVEKAQHYAETA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236
            +I+P  PW  +A     V A +W  A+  L      K  +     R+RA+L  A ++E 
Sbjct: 179 REIAP-LPWAAKANFAHKVAAGDWRGALALLESGAGSKHIDKTIRERSRAVLETAIAIEK 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD      +   A  ++K     + A   AA+    Q   RKA  ++E  W    HP+IA
Sbjct: 238 AD-AQPAEALALARAAVKRAPTLVPAVALAARLTSEQGDARKAAKLIEAGWAGTHHPDIA 296

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-- 353
            IY  L   E++  +LKRA+ L ++     ES ++V++ A+  G    A       ++  
Sbjct: 297 KIYVGLYPGESSADRLKRAISLAQLAPREPESKIMVAEAAIAAGDFKAAREAMQPLIEGP 356

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             P   +  L+A++E+        I  W   A  A PDP W++ DG  S  W P+SP++ 
Sbjct: 357 ERPTARMCRLMAELEEKQHGAAGYIREWLTRASLAPPDPTWVA-DGVASDQWRPISPVTG 415

Query: 414 TLCYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
            L  F W+ P +       +E+  F+  +      L             ++      +  
Sbjct: 416 KLDAFVWQKPVERLSSGNEAEDAIFAQILPPEPPLLLEEAQTASGAKTGALDGPPHPDPE 475

Query: 473 TIHPLDPHIRQPDDP 487
              P+ P      +P
Sbjct: 476 IAIPMGPPPPTTAEP 490


>gi|110635528|ref|YP_675736.1| HemY-like [Mesorhizobium sp. BNC1]
 gi|110286512|gb|ABG64571.1| HemY-like protein [Chelativorans sp. BNC1]
          Length = 533

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 144/519 (27%), Positives = 264/519 (50%), Gaps = 31/519 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ +  ++ L+   F  ++  P ++++T+G   Y+ +  +   +L   + A ++L+ 
Sbjct: 1   MFRILLFLVIVMLLGLGFAWLADRPGELAVTFGGYQYQVTLMMAAVLLVAAIAAVMILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   + P  +      R  D+GY+AL TGL++  A +  LAR+M    ++  +   E 
Sbjct: 61  IVRGIWTSPYTVRRYFRARRRDRGYQALSTGLIAAGAGDAGLARRMGQQAAKLISSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LL+ Q A+ E  +  A  K + M   P TR   +  LY E+ R G+  +A+ YA +A
Sbjct: 121 LIHLLDAQAAMLEGNHEAARAKFQAMADDPETRLLGLRGLYLEAERHGEREAARHYADEA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLEN 236
             I+P   W  +A ++      +W  A+  L+++K ++KE      R RA+LL A+++  
Sbjct: 181 TKIAPQLGWAADATLEAKADEGDWQGALALLDKQKPSSKEERAALARKRAVLLTAQAMAQ 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  +  A+   A+E+ +L  + + A++ AA++L  Q+  R+   +LE +W  +PHPE+A
Sbjct: 241 LNM-NPAAAKTAALEAHRLQPDFVPAAVTAARALFRQDDLRRGAKVLEAVWAKSPHPEVA 299

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +IY H    ++T  +L RA +L  +   + ES++ V++ AL+ G   +A   A  A+++ 
Sbjct: 300 DIYVHARPGDSTHDRLTRAKKLRRLKPNNAESVLAVARAALDAGEYGEAREAAEAAVRLD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           PR+  FLLLA IE+A   +  ++ YW   A+ A  DP W++ DGY++  W P SP++  L
Sbjct: 360 PREGAFLLLADIEEAERGDQGRVRYWLAKAVRAPRDPAWVA-DGYVAERWAPASPVTGRL 418

Query: 416 CYFEWKIPTKS-PEYISSENINFSLE------MAYPADDLQSMLNNGKKNHLPSIKKVSS 468
             FEW+ P +   + I  E    +L        A   ++   +L   +   +  +   S 
Sbjct: 419 DAFEWRAPMERLGQIIEGEEALRALPPLETGVKASEEEEADDVLLPAEAEPVVEVAAQSE 478

Query: 469 FEDST---------------IHPLDPHIRQ--PDDPGIK 490
            E +                  P +  IR   PDDPG++
Sbjct: 479 SEKAETALPGDNGAKEPAADAEPTEEDIRPPLPDDPGVE 517


>gi|209883479|ref|YP_002287336.1| HemY protein [Oligotropha carboxidovorans OM5]
 gi|209871675|gb|ACI91471.1| HemY protein [Oligotropha carboxidovorans OM5]
          Length = 572

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 118/470 (25%), Positives = 214/470 (45%), Gaps = 15/470 (3%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
            V+     + ++W      TS  V   +    L   +++++V R F   P  L     ++
Sbjct: 20  WVADQGGGLVLSWSGWRIETSLPVAALLGVILLAVALVVWSVVRTFWKAPEGLRRRRREK 79

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
              K  +A+  GL+++   +   A++     ++     ++ L  +L+ Q A  E     A
Sbjct: 80  RAAKARRAITQGLIAVGTGDSFAAQRHAGMATRLAA--HDPLALMLQAQTAQLEGDRAGA 137

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                 M +    R   +  L+ E+ R  D  +A   A +AL I+P +PW ++AV+    
Sbjct: 138 QRAFRAMAERKDMRLLGLRGLFIEAQRSDDAYTAVAMAEEALKIAPASPWASQAVLGFRC 197

Query: 200 LAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +W  A+  L+  K         + R R +LL AR+L   ++ D  AS   A+E++KL
Sbjct: 198 AGSDWDGALALLDTNKAAGLVEPAVYRRERGVLLTARALA-LEERDRDASRKSAMEAVKL 256

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRA 314
               + A++ AAK     N+ R+A  ++E  W  NPHP++A+ Y H+   ++   +L R 
Sbjct: 257 APQLVPAAVLAAKFYSEDNQVRRAMRVVEAAWVANPHPDLADAYAHVRLGDSARERLSRV 316

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
             L +   +  E  + V++ A++ G  ++A       +  AP + + LL+A++E+AN  +
Sbjct: 317 EMLAQKTPDHREGRLAVARAAIDAGEFERAREALAPLID-APTQRVALLMAELERANH-D 374

Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK--SPEYISS 432
             +   WT  A+ A PDP W + DGY+S  W P+SP++  L  F+W  P    +PE  + 
Sbjct: 375 EGRAREWTARAVRAAPDPAWTA-DGYVSDRWRPVSPVTGRLDAFQWVTPVAALAPERATI 433

Query: 433 ENINFSLEMAYPA--DDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480
           E    +L M   A     +   +   + +L +  KV +  D         
Sbjct: 434 EAETPTLPMPPIAIESKPEEKADANPETNLEADVKVDTAPDEAAASPIAE 483


>gi|319780790|ref|YP_004140266.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166678|gb|ADV10216.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 534

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 149/523 (28%), Positives = 251/523 (47%), Gaps = 33/523 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  V+  +   F  ++  P D+ +T+    Y+ S  V    +   + A ++L+ 
Sbjct: 1   MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAVVAVVAAVMILWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +   + P  +      R  D+GY+AL TG+++  A +  LARK     ++      E 
Sbjct: 61  LLKALWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L++LLE Q +L E  +  A +K E ML  P  R   +  LY E+ R+GD N+A+ YA +A
Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
             ++P   W  E+ +++     +W  A+  ++ +    +      NR RA+LL A++   
Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKATRQIERDAANRRRAVLLTAKAQAL 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD  D  A+   AIE+ KL  +   A++ AA +L  QN  RK   ILE  WK  PHPEIA
Sbjct: 241 AD-SDPAAARTAAIEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILEAAWKAEPHPEIA 299

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +YTH    + V  +L RA +L+E+ K   ES + V++ AL+      A  +A  A+++ 
Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFATARREAEAAIRMD 359

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
            R+  +LLLA IE+A + +  K+      A+ A  DP W++ DG +S  W P+SPI+  L
Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSRAVRAPRDPAWVA-DGVVSERWAPVSPITGRL 418

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNG-------------------- 455
             FEW+ P +    +   + +     A   + L    +                      
Sbjct: 419 DAFEWRAPMERLGQLIDSHDDAPAGAAPVIEALAKPTSEKRPIEVIDDAGGETSAGKQAE 478

Query: 456 --KKNHLPSIKKVS----SFEDSTIHPLDPHIRQPDDPGIKEQ 492
             +++H+  I   +      +   + P +   R PDDPG+   
Sbjct: 479 SREEDHVRPITAAAFAAVPSDAEGVEPAEELARLPDDPGVDPD 521


>gi|115522092|ref|YP_779003.1| HemY domain-containing protein [Rhodopseudomonas palustris BisA53]
 gi|115516039|gb|ABJ04023.1| HemY domain protein [Rhodopseudomonas palustris BisA53]
          Length = 577

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 10/428 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR+I +  VI+L       ++  P +V ++W       S  V   ++   L + +L +A
Sbjct: 1   MLRIILFLVVIALAATGAAWLAEQPGNVVLSWNGWQAEASLAVFSMVVGGILVSVLLAWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P  L     +R   +   A+  GL+++   +  +AR   +   +     N+ 
Sbjct: 61  IITGLWRSPRRLARSRRERKLARARHAVTQGLLAVGHGDAAIARAHANAARRH--SPNDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  +     A      M     T+   +  L+ E+ R  D  +A   A +A
Sbjct: 119 LALLLQAQAAQLDGDREGAKRAFLAMASRDDTKSLGMRGLFIEAQRAEDPYAALTVAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L +SP + W   AV+       +WS A+  L     +     K + R R +LL AR++E 
Sbjct: 179 LRLSPGSHWAAHAVLGFRCARSDWSGAMDILENNLASGLIDKKTYRRQRGVLLTARAIEC 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D+  +   A+E++KL    + A++ AAK +   ++ R+A  I+E  W  +PHP++A
Sbjct: 239 ED-ADVSVARDSALEAIKLVPTLVPAAVLAAKYMSEAHQLRRALKIIEAAWIAHPHPDLA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y H+   ++   +L R   L       +E  + +++ A++     +A       ++ A
Sbjct: 298 EAYAHIKQGDSAQARLSRIETLAAKAPGHIEGALAIARAAIDASDFTRARNALAPYVE-A 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE A+ +++     WT  A+ A+ DP+W + DG +S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHADRNDSRAARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPVTGRL 415

Query: 416 CYFEWKIP 423
             F+W  P
Sbjct: 416 DAFQWTSP 423


>gi|316931768|ref|YP_004106750.1| HemY domain-containing protein [Rhodopseudomonas palustris DX-1]
 gi|315599482|gb|ADU42017.1| HemY domain protein [Rhodopseudomonas palustris DX-1]
          Length = 565

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 126/543 (23%), Positives = 234/543 (43%), Gaps = 56/543 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +I+L       V+  P +V ++W +     +  V  + L   + A +L +A
Sbjct: 1   MLRIVLFLVIIALAAAGAAWVAEQPGEVVLSWNDWRASMTLPVFAAALGAGVVAVMLAWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  P  +      R  ++   A+  GL+++   +           + +    ++ 
Sbjct: 61  IVLGVVRAPGWMKRGRSSRRSERARNAITQGLLAVGHGDSAA--ARAHANAARRHAPHDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  E     A      M     T+   +  LY E+ R  D  +A   A +A
Sbjct: 119 LALLLQAQSAQLEGDREGARRAFLAMASRKDTKSLGMRGLYIEAQRADDPYAALAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L + P+  W ++AV+       +W+ A+  L +         K + R RA+LL AR+++ 
Sbjct: 179 LRLQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTARAID- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ D   +   A+E+ KL    + A++ AAK L   ++ R+A  ++E  W+  PHPE+A
Sbjct: 238 LEESDESLARDSALEANKLAPTLVPAAVLAAKHLAGAHQVRRAMKVIEAAWQAQPHPELA 297

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + Y +L   +T   +L R   L     + +ES V +++ A++ GS  +A       +++ 
Sbjct: 298 STYANLKPGDTATARLGRVENLVGKGPQQLESAVAIARAAIDAGSFGRARTALEPYLEM- 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE  +  +T K   WT  A+ A+ DP+W + DGY+S  W P+SP++  L
Sbjct: 357 PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415

Query: 416 CYFEWKIPTKS--------------------------PEYISSENINFSLEMAYPADDLQ 449
             F+W++P  +                          P   +SE +  ++E A  A  + 
Sbjct: 416 DAFQWQVPVSALPSSKAVVIDDKFHDALIASATTEALPASETSEAVTVTVEAAPEAPIVT 475

Query: 450 SMLNNGKKNH-------------------LPSIKKVSSF-EDSTIHPLDPHIRQPDDPGI 489
                                         P+      F       P+ P +R PDDPG+
Sbjct: 476 PKEPTVAAEEPAKADKPAKAAEAPAETMAAPASSPSPLFHRRKEAAPVIPIVRAPDDPGV 535

Query: 490 KEQ 492
            + 
Sbjct: 536 DDD 538


>gi|158421882|ref|YP_001523174.1| putative HemY protein [Azorhizobium caulinodans ORS 571]
 gi|158328771|dbj|BAF86256.1| putative HemY protein [Azorhizobium caulinodans ORS 571]
          Length = 532

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 112/479 (23%), Positives = 212/479 (44%), Gaps = 12/479 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  V++ +      ++  P ++ + W      T+  V L+ L  F  A ++++ 
Sbjct: 1   MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVPVALAALAAFSVALLIVWH 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L  P M+     +R  +KG+ A+  GL++I + +  L     +          E 
Sbjct: 61  LGALLLRSPRMIATFSRRRRREKGWAAVSRGLVAIGSGD--LDAARRARAEALRYLPKEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A A    + A      ML  P TR   +  L+ E+ R GD+ +A+  A +A
Sbjct: 119 LTQLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHMEARRSGDIAAARMLAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
            + SP   W  +AV++      +++ A   L ++  +      ++ R RA+ L+A     
Sbjct: 179 ANQSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAV-LLAAEALA 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            ++ D   +   A+E+++L    + A+  A + L +  + RKA  I+E  +   PHPE+A
Sbjct: 238 LEQTDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPELA 297

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +  HL   +    +LKR   L     +  ESL+ ++   ++     +A A     +   
Sbjct: 298 QVAAHLRPGDAALDRLKRIRTLAAKAPDHAESLIALAHATIDANEFAEARALLQR-LSAE 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + LL+A++E +   +  K   W   AL A  DP WI+ DG +   W P+SP++  L
Sbjct: 357 PTQRVCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIA-DGRVFDAWAPVSPVTGKL 415

Query: 416 CYFEWKIPT--KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472
             F W +P    +   +  E     L +A   +  ++     +   L  +    +  ++
Sbjct: 416 DAFVWAVPPGVSATPVLEHEAERVRLAIAAIREKEEARRELARAAELEKLAASEAVAEA 474


>gi|312114938|ref|YP_004012534.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311220067|gb|ADP71435.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 524

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 123/496 (24%), Positives = 211/496 (42%), Gaps = 18/496 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RLI YF +I LV   F  ++  P +V+I W     +TS F+    L        LL  
Sbjct: 1   MTRLIGYFVIIVLVAVGFAWIADRPGNVTIQWLGYDIQTSVFIGSVALLLAFVIVFLLGW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +     + P      + +R    G +A+  G+ +  A +   A K  +    + T  NE 
Sbjct: 61  LGLLTWTGPKKFRGRMQRRRQRVGQEAVRRGIFAAGAGDKSAALK--ADAIARRTVPNEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A        + +  E ML+ P   E  +  LY E+ +     +A+++A +A
Sbjct: 119 LALLLQAQSAQLNEDSIASRQAFERMLEKPEMAELGLRGLYMEAKKANQNEAAKQFAERA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236
           L  +P   W + A+ +      +W  A+  L   K++      E +R R++LL   ++E 
Sbjct: 179 LAANPALAWSSSALFEIQSREGDWRAALKTLQIAKEHRHLAKPEADRRRSLLLTQLAIEL 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D      +   A E+  L    I A++ A + L +Q +  +A  IL + W+   HPEIA
Sbjct: 239 ED-SQPSKALAYATEAFDLSPTLIPAAVVAGRILTTQGQTSRATKILTQAWRSTQHPEIA 297

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             + H    ++   +L R   L     +++E  V V+  A++      A       +   
Sbjct: 298 LTFAHARRGDSPRDRLARVKSLVAAGSQTLEGAVAVAVSAIDAQEWKTARLALEPYLANN 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P   +  L+A+IE   + ++ +   W   A    PDP+W++ DG +S+ W P+SP +  L
Sbjct: 358 PPARVCRLMARIEAGQNRDSGRAREWLAKAARGAPDPVWVAPDGTVSAEWQPISPTTGAL 417

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLP-SIKKVSSFEDSTI 474
             FEWK P   P   S+   +F+ E++         + + +   LP S  K       + 
Sbjct: 418 GSFEWKTP---PANASANPDDFAAEISA------LDVVSLEGESLPDSYAKTKGLSGRSN 468

Query: 475 HPLDPHIRQPDDPGIK 490
            P+D         G  
Sbjct: 469 EPVDVVASPVGKDGSD 484


>gi|86747438|ref|YP_483934.1| HemY-like [Rhodopseudomonas palustris HaA2]
 gi|86570466|gb|ABD05023.1| HemY-like [Rhodopseudomonas palustris HaA2]
          Length = 583

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 127/487 (26%), Positives = 217/487 (44%), Gaps = 11/487 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR+I +  +I+L       V+  P DV ++W          V +  L   + A  L++A
Sbjct: 1   MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNAWRAEMRLPVFILGLGGAIVAIGLVWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P  + H    R   K  +A+  GL+++   +   AR   +   +     ++ 
Sbjct: 61  IIAALWRAPKRMKHGRAARRSGKANRAITQGLLAVGHGDAAAARSHATAARRHA--PHDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A  E   + A      M     T+   +  LY E+ R  D  +A   A +A
Sbjct: 119 LALLLQAQAAQLEGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRANDPQAALAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
           L + P+A W ++AV+       +W+ A+  L     +     K + R RA+LL AR+L+ 
Sbjct: 179 LRLQPNAAWASQAVLGFRCARADWTGALEILETNLSSGLVDKKAFRRQRAVLLTARALDV 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D  D   S   A+E+ KL    + A++ AAK L   ++ R+A  +LE  W+  PHP++A
Sbjct: 239 ED-SDQSLSRDSALEANKLAPTLVPAAVLAAKCLAETHQVRRAMKVLETAWQAEPHPDLA 297

Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y H+   +    +L R   L        ES + +++ A++ G   +A       +   
Sbjct: 298 EAYAHIKPGDPPATRLARIENLIGKKATDFESALALARAAIDAGEFSKARLALQPYLD-N 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + +L+A+IE     +T K   WT  A+ A+PDP+W + DGY+S  W P+SP+S  L
Sbjct: 357 PTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDPVWTA-DGYISDHWRPVSPVSGRL 415

Query: 416 CYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474
             F+W++P  + P   +    +     A  A      L   K +    +      +D+ +
Sbjct: 416 DAFQWQVPLAALPAKKTVVIEDNPFHDALIASSAPEALPPAKADAAVMVTVEPVADDAIV 475

Query: 475 HPLDPHI 481
            P  P  
Sbjct: 476 TPKQPEA 482


>gi|220924339|ref|YP_002499641.1| HemY domain-containing protein [Methylobacterium nodulans ORS 2060]
 gi|219948946|gb|ACL59338.1| HemY domain protein [Methylobacterium nodulans ORS 2060]
          Length = 507

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 115/466 (24%), Positives = 211/466 (45%), Gaps = 10/466 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++TW      TS    L  +  F      ++A
Sbjct: 1   MWRALAFLALLAIAAYGAVWLADHPGVVTVTWSGYEVATSLAAALVGVLIFAVILGFVWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
            +R  L  P  L      R   +GY+AL  G++++ + +   AR+     +      +E 
Sbjct: 61  FTRGILRFPHRLRVRNRARRRARGYEALSRGMVAVGSGDPAAARRHAGEAA--RLLGDEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A        A      M + P TR   +  L+ E+ R GD  +A+ YA +A
Sbjct: 119 LALLLKAQAAQISGDRAGAENAFRRMTEEPETRVLGLRGLFVEARRQGDEATARAYAAEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++     ++W+ A+  ++++      +     R RA+LL A +LE 
Sbjct: 179 ARLAPGVSWANEAVLEAQCADRDWNNALETVSRRASLGIADKTAARRQRAVLLTASALE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + GD   +   A E++KL  + + A+  A +    +   ++A  ++E  WK +PHP++A
Sbjct: 238 LEAGDPERALAQAREAVKLAPDLVPAAAVAGRLFARRADLKRAARVVEAAWKASPHPDLA 297

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y  L   +++  +L RA  L  ++    ES   +++ ALE     +A       +   
Sbjct: 298 RVYLDLRPGDSSRDRLARAETLARLSSWHPESRFAIARAALEAREFGRARDVLSPLLADN 357

Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P + ++L++A+IE+A     + +   W   A HA  DP W   DG +S  W P+SP+S  
Sbjct: 358 PTQRVYLMMAEIEEAEHGRGSGRAREWLARAAHAPRDPAW-CADGIVSDRWAPVSPVSGR 416

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL 460
           L  F W+ P +     S E      E++ P           ++   
Sbjct: 417 LDAFVWQTPPELLGRSSREVPPEEKEVSEPGPLPAPGPAVKEEKPA 462


>gi|182678175|ref|YP_001832321.1| HemY domain-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634058|gb|ACB94832.1| HemY domain protein [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 493

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 121/491 (24%), Positives = 214/491 (43%), Gaps = 23/491 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +I+ +      +   P    +TW      TS  V +++L        L   
Sbjct: 1   MLRVLLFLCLIAALALGAAWIGEQPGHFLMTWQGYQVETSAPVAITLLGVSAAILALALW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    L+ P         R  +KGY AL  G+++  A +  +A K  + +  Q     + 
Sbjct: 61  LLVTILNLPKTFARWRETRLKNKGYAALSRGIVAAGAGDTHVANK--AALDAQKYLPKDP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV +LE Q A      + A +   +M + P  R   +  LY E+ R  D  +A  +A +A
Sbjct: 119 LVLVLEAQAAQLAGDRSRAQDAFRLMGERPEMRLLGLRGLYAEALRNDDSEAAYHFAHEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLEN 236
             + P  PW  +AV+ +++ A++W  A   L    N +  +     R  AIL  A + E 
Sbjct: 179 HKVHP-LPWSAKAVLDEHIRAQDWEGAFGILGKQINAQLVDKATGERQCAILETAMAQEK 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +      +     ++LK   + + A +  A     +N  R+A  ++E+ W    HP+IA
Sbjct: 238 -ELSAPDEALRLGRQALKHAPDLVPAIVLVAHLWGRKNDVRRAAKLIEREWPNIQHPDIA 296

Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMK 353
             Y  L   ++ + +L+RA RL  +   S ES + V+  A+       A    + +LA +
Sbjct: 297 LAYLDLRPGDSNMDRLRRAQRLARLAPGSAESRLSVAGAAIAARQFALARETMRELLAKE 356

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             P   +  L+A++E+  S  +  +  W   A  A  D  W++ DG++S  WLP SP++ 
Sbjct: 357 KTPTVRMCQLMAELEETESGFSGSVREWLAKASRAPRDETWVA-DGFVSPKWLPASPVTG 415

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
            L  F W+ P         E +  +L+ A   ++   +L+  +K+   + KK +  E   
Sbjct: 416 QLDAFRWQRPV--------ERLVVTLDNAEAVEETALLLSEEEKHGADTSKKAAVQE--- 464

Query: 474 IHPLDPHIRQP 484
           I P      QP
Sbjct: 465 ILPPAEASTQP 475


>gi|154245109|ref|YP_001416067.1| HemY domain-containing protein [Xanthobacter autotrophicus Py2]
 gi|154159194|gb|ABS66410.1| HemY domain protein [Xanthobacter autotrophicus Py2]
          Length = 567

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 107/450 (23%), Positives = 210/450 (46%), Gaps = 10/450 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  ++  +      ++  P +V++ W    Y T+  V L+++       ++L+ 
Sbjct: 1   MIRLVLFLLLLVAITFGVSWLADRPGEVTVVWEGVAYGTTVPVALAVIAVVAGLILILWR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  P ++     +R  +KG+ A+  GL+++   +   A    +         +E 
Sbjct: 61  ILSLLVRSPKIIAAFSRRRRREKGWNAVTRGLLAVGIGDN--AAVRQARHDAARLLPHEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L +LL  Q A  + ++ +A      M+  P TR   +  L+ E+ + GD  +A   A +A
Sbjct: 119 LTHLLTAQAAQLDGKHEVAVAAFRAMVDKPETRLLGLRGLHMEARKAGDKVAAYAIAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
              +P   W  +AV++    A +++ A   L ++      +  ++ R +A+LL A ++  
Sbjct: 179 ASAAPTLGWAADAVIEARCAAGDYAGARGVLERQMALKGIDKAQYRRRKAVLLAAEAIA- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D + +   A+E+++L    + A+ CA + L +  + RKA  ++E  +  NPHPE+A
Sbjct: 238 LEHSDPLVAREKAVEAVRLAPTLVPAAACAGRLLGAAGELRKAAKVVETAFATNPHPELA 297

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           ++  +L   +    +LKR   L        ES + +S+ A++     QA       +   
Sbjct: 298 DVEAYLRPGDAAQDRLKRIRTLVNRAPSHRESAIALSRAAIDAHEFRQARLVLEPLL-AE 356

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
           P + + LL+A++E A   +  K   WT  A+ A  DP WI+ DG +S  W  +SP+S  L
Sbjct: 357 PSQRVCLLMAELEAAEHADIGKAREWTARAVRAHRDPAWIA-DGVVSDAWAAVSPVSGKL 415

Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPA 445
             F W++P         E+    ++ A  A
Sbjct: 416 DAFVWEVPPGVSATPILEHEAERVKAAIAA 445


>gi|170748490|ref|YP_001754750.1| HemY domain-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170655012|gb|ACB24067.1| HemY domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 536

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 110/479 (22%), Positives = 205/479 (42%), Gaps = 14/479 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  +++L     + ++  P  V++ W      TS  V L  +        LL+A
Sbjct: 1   MWRALAFLALLALAAFGAVWIADRPGTVTVVWNGYQIGTSLAVALVGVIAAAIVLGLLWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  +  P  L     +R   KG  AL  G++++ + +   AR+       +     E 
Sbjct: 61  IVRGVIGLPEALVRGSAERRRAKGLSALSRGMVAVGSGDPLAARRYAG--DAERLLGTEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A      + A    + M+  P TR   +  L+ E+ R  D  +A+ YAT+A
Sbjct: 119 LTLLLKAQAAQISGDRDAAESAFQRMVDDPETRVLGLRGLFVEARRREDETAARAYATEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
             ++P   W  EA+++      +W+ A+  + ++      +     R RA+LL A + E 
Sbjct: 179 ARLAPSVTWANEALLEAQSADGDWAAALETIERRSSLGLIDKAAARRQRAVLLTAIAGER 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G+   +    ++++KL  + + A+  A + L  +   +KA  I+E  WK NPHP++A
Sbjct: 239 -EAGEPELATERVLQAVKLAPDLVPAACIAGRLLARRGDVKKAARIVEAAWKANPHPDLA 297

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y  L   ++V  +L RA  L +++    ES + + + AL+     +A       +   
Sbjct: 298 KVYLGLRPGDSVRDRLARAEVLAKLSVWDPESRLALGQAALDARDYKRAREAVKPLLSDR 357

Query: 356 PRKEIFLLLAQIEQANSHN-TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P     L++A IE+A     + +   W   A  A  D +WI+ DG  +  W P+SP++  
Sbjct: 358 PTARACLMMAAIEEAEHGAASGQAREWLARAARAPRDRVWIA-DGIATDTWAPVSPVTGR 416

Query: 415 LCYFEWKIPT----KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469
           L  F W+ P      +P      +      +    +    +      +  P+       
Sbjct: 417 LDAFAWREPPNTLGAAPAVEPEADAAGPALVPAAPNAAAPVAKPTPASKSPAATTSPPA 475


>gi|288957242|ref|YP_003447583.1| hypothetical protein AZL_004010 [Azospirillum sp. B510]
 gi|288909550|dbj|BAI71039.1| hypothetical protein AZL_004010 [Azospirillum sp. B510]
          Length = 449

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 110/445 (24%), Positives = 199/445 (44%), Gaps = 8/445 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R + +   +++VI   I ++  P  VS+ W         +V L +L   L    L + 
Sbjct: 1   MIRALWFLLKLAVVIAIAIWLADRPGSVSVHWLGYAVEAPFWVALLVLLAALGLAALGYR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  +  P  L      R  ++GY+AL  G+++IAA + P ARKM          +   
Sbjct: 61  LLRGTIRLPQRLRRHSRARRRERGYRALTQGMVAIAAGDAPTARKMARKAD--VLLNEPP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  +     A +    ML+ P T    +  L  ++ + GD   A   A KA
Sbjct: 119 LTMLLSAQAAQLQGDERAAKQYFTAMLERPETAFLGMRGLLTQAIKSGDRVEALTLARKA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236
             + P+ PW+   +      A +W+ A   L Q  +       E  R+R +LL+ RS E 
Sbjct: 179 RGLQPNTPWLLGTLYDLEARAGDWAAAEGTLQQAIQAGAMPTEEGRRHRVVLLLERSFEA 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             +G   A+   A  +  L      A++  A+  ++ ++ + A  ++E+ W+  PHPE+A
Sbjct: 239 ERRGRADAALSHAQAAHDLMPGFAPAAVRLARLQVAADRLKPAAKVVERAWRHEPHPELA 298

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +IY  ++ S + + +++   +L     +S ES + V++ A++     +A      AM+I 
Sbjct: 299 DIYGTIVASYDALTRVRLFQKLVRQAPDSAESHLAVARAAIDAQLWGEARQHLERAMEIG 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKT 414
           P +  + L+A +++   H+ +    W   A +A  DP+W     G +S  W  L      
Sbjct: 359 PTRRTYRLMAALDRGERHDEEVAKDWLAKAANAPEDPVWTCGSCGAVSHNWGGLCGHCGA 418

Query: 415 LCYFEWKIPTKSPEYISSENINFSL 439
                WK PT +   + + ++  +L
Sbjct: 419 FDSLSWKAPTVAVPLMEATDLPPAL 443


>gi|170742656|ref|YP_001771311.1| HemY domain-containing protein [Methylobacterium sp. 4-46]
 gi|168196930|gb|ACA18877.1| HemY domain protein [Methylobacterium sp. 4-46]
          Length = 528

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 112/446 (25%), Positives = 210/446 (47%), Gaps = 13/446 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  +++L     + ++ +P  VS++WG     TS    L  +         L++
Sbjct: 1   MWRALAFLALLALAAYGAVWLADHPGVVSVSWGGVDVATSLNAALVGVLVLAVVLGFLWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           ++R  L  P  +    H+R   +G++AL  G++++ + +   AR+       +    +E 
Sbjct: 61  LARGVLRLPRRMRASSHERRRTRGFEALSRGMVAVGSGDPAAARRHAGEA--ERLLGSEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A        A      M +   TR   +  L+ E+ R GD  +A+ YA +A
Sbjct: 119 LALLLTAQAAQISGDRAGAERAFRRMTEASETRVLGLRGLFVEARRQGDEATARAYAAEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++     ++W+ A+  ++++      +     R RA+LL A + E 
Sbjct: 179 SRLAPGVSWANEAVMEAQCADRDWAGALETVSRRAALGLADKAASRRQRAVLLTASAQE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + GD   +   A E+++L  + + A++ A + L  + + +KA  ++E  WK  PHP++A
Sbjct: 238 LEAGDPERALAQAREAVRLAPDLVPAAVVAGRLLSRRAELKKAARVIEAAWKAGPHPDLA 297

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y  L   +++  +L RA  L  ++    E+   +++ ALE     +A       +  +
Sbjct: 298 RVYLDLRPGDSSRDRLARAETLARLSSWHPEARFAIARAALEAREFGRARDVLQPLLAES 357

Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414
           P +  +LL+A+IE+      + +   W   A HA  DP W   DG +S  W P+SP+S  
Sbjct: 358 PTQRAYLLMAEIEETEHGRGSGRAREWLSRAAHAPRDPAW-CADGIVSDRWAPISPVSGR 416

Query: 415 LCYFEWKIPTKSPEYISSENINFSLE 440
           L  F W+ P   PE ++  + +  L 
Sbjct: 417 LDAFVWQTP---PELLAGRSQDLPLP 439


>gi|296444989|ref|ZP_06886950.1| HemY domain protein [Methylosinus trichosporium OB3b]
 gi|296257410|gb|EFH04476.1| HemY domain protein [Methylosinus trichosporium OB3b]
          Length = 466

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 13/453 (2%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
            +  +P  +++ WG     TS  V ++     +   I+ +A+   F   P  L      R
Sbjct: 20  WMLEHPGSITLDWGGYHIETSLLVAIAATLGLIALVIIAWAILVSFFQAPTRLAQSSRSR 79

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             +KG++AL  G+++  A ++  A+K       +     E L +LL+ Q+A  E     A
Sbjct: 80  RREKGFQALSRGIIAAGAGHVGAAKKASKEA--EKCLAKEPLTFLLKAQVAQLEGDRVGA 137

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                 M  +  TR   +  L+ E+ R  D  +A  +A +A  ++P  PW   A+++ + 
Sbjct: 138 ETAFHEMTLLSETRLLGLRGLHIEAKRRNDAEAAHLFADQAHQLAP-VPWAGHALLEHHG 196

Query: 200 LAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +W  A   +    K          R RA++  A ++E         + H A +++K 
Sbjct: 197 SNADWEEARVAIEANLKAKAIDLPTAQRLRAVVETALAMEKQVDS-PSEALHLARQAVKR 255

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRA 314
               + A     + L       KA  +LEK +  NPHP+I   Y      E+   +L R 
Sbjct: 256 APTLVPAIALIGRLLARHGDSAKALKLLEKAYAENPHPDIVAAYLDASPSESNAERLARV 315

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQANS 372
            +L     ++ ES VIV++ AL       A       +    AP  +I LL+A++E A +
Sbjct: 316 KKLALAAPKAPESGVIVARAALAARDFAMARRALAPLVAEGQAPTAQICLLMAEVEDAEN 375

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISS 432
             +  +  W      A  DP WI+ DG +S  W P SP++  L  F W  P + P    +
Sbjct: 376 GPSGPVREWLARGSRAPRDPAWIA-DGVISRSWAPASPVTGKLDAFVWTTPPE-PIRGPA 433

Query: 433 ENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
           E+    +  A+     + +L   + +      +
Sbjct: 434 EDARAGIPAAFLTTRQERLLEAAEIDADSGAAE 466


>gi|218672801|ref|ZP_03522470.1| hypothetical protein RetlG_14767 [Rhizobium etli GR56]
          Length = 382

 Score =  363 bits (932), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 200/369 (54%), Gaps = 6/369 (1%)

Query: 15  ICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFH 74
              F   +  P D+S+ W  ++Y+T   V +S +   + A ++++   R   + P  +  
Sbjct: 15  AYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTR 74

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
               R  D+GY+AL TGL++  A N  LARKM +          E L+ LLE Q AL E 
Sbjct: 75  YFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEG 134

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA D +P  PW  +A 
Sbjct: 135 RHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQAT 194

Query: 195 VQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++    A  W  AI  L Q+K        E NR  A+LL AR+ E  + G+   +  DA+
Sbjct: 195 LEYRSQAGRWDDAIRLLEQQKAARVVEKTEANRLHAVLLTARAGEKLE-GNPAGARDDAL 253

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVG 309
           ++LKL  + + A++ AAK+L  +   RKA  ILE+ WK  PHPEI   Y      ++T+ 
Sbjct: 254 QALKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIGQTYVRARSGDSTLD 313

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           +LKRA RLE +   +VESL++V++ AL+     +A  KA  A +I PR+  FLLLA IE+
Sbjct: 314 RLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARTKAEAAARIEPREAAFLLLADIEE 373

Query: 370 ANSHNTDKI 378
           A + +  ++
Sbjct: 374 AETGDQGRV 382


>gi|298292771|ref|YP_003694710.1| HemY domain protein [Starkeya novella DSM 506]
 gi|296929282|gb|ADH90091.1| HemY domain protein [Starkeya novella DSM 506]
          Length = 526

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 116/498 (23%), Positives = 221/498 (44%), Gaps = 18/498 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ Y  V++L+      ++  P  ++I W      TS  V  S L   L A ILL+ 
Sbjct: 1   MIRLVVYLLVLALIAFGVAWLADRPGSIAIDWQGWQIETSILVAASALLALLAATILLWT 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P ++      R  ++G+ A+  GL+++ + +   AR+  +    +    +E 
Sbjct: 61  LLRLIFRSPELIAFSWRSRRRNRGWAAVTRGLVAVGSGDALGARR--AANDAERLLGHEP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A      + A      M + P+TR   +  L+ E+ R GD  +A   A +A
Sbjct: 119 LTRLLAAQAAQLAGDRDGAEAAFRAMSETPSTRLLGLRGLHVEARRRGDAAAALLSAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENA 237
             + P   W  +AV++   L  +++ A+  L ++  +    +  +R R  +L+A   +  
Sbjct: 179 ARVEPGLAWAADAVIEARCLNGDFAGALATLEREAAHGGLERAAHRRRRAVLLAAQAQAL 238

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           +  D   +   A+E+ +L    + A+  A + L +    RKA  I+E  +   PHP++A+
Sbjct: 239 ELSDPSTAREKAVEATRLAPTLVPAAEVAGRLLGASGDTRKAAKIIEAAYAATPHPDLAD 298

Query: 298 IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + HL   +++  +LKR   L        ES +++++ A++    D A       +   P
Sbjct: 299 AFLHLRPGDSSQERLKRIRTLTARMPSHPESAMVLARAAIDAQEFDVARTALGPLLG-EP 357

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLC 416
            +   LL+A++E A   +  K   WT  A+ A  DP W++ DG ++  W P+SP++  L 
Sbjct: 358 TQRACLLMAELEAAEHGDVGKAREWTARAVRAARDPAWVA-DGVVAERWAPVSPVTGKLD 416

Query: 417 YFEWKIPT----------KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
            FEWK+P           ++    ++         A  A+    +++   +   PS+   
Sbjct: 417 AFEWKLPPGVATTPMLENEAERVKAAIAAAIEARPAAEAEPEPPVVDLTPEEPAPSLAPE 476

Query: 467 SSFEDSTIHPLDPHIRQP 484
           +  ++           +P
Sbjct: 477 AEVKEPAKPEAIRPAPKP 494


>gi|154251805|ref|YP_001412629.1| HemY domain-containing protein [Parvibaculum lavamentivorans DS-1]
 gi|154155755|gb|ABS62972.1| HemY domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 512

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 112/489 (22%), Positives = 195/489 (39%), Gaps = 24/489 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR +  F +++++    I ++  P D+ + W     RTS  V + ++    F  +L + 
Sbjct: 1   MLRALYIFLIVAVLSGIAIWLADNPGDLIMHWRGYEIRTSFVVGVGVMALAAFLVLLAYR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +   F+  PA +   L KR   KG+ AL  G++++AA +   A++  +   +        
Sbjct: 61  IIVSFIETPASVSAYLEKRRQQKGFLALSRGMVAVAAGDAADAKRYAAQAHK--LLDAPP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A  E     A    E ML  P T    +  L+ ++ R GD + A  +A +A
Sbjct: 119 LTLLLAAQAAQLEGNEAAATAYFEQMLAAPETEFLGLRGLFIQARRAGDRDGALAHARRA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLI------ 230
            ++ P  PW  +AV +     ++W  A+  L++    K     E  R RA+LL       
Sbjct: 179 FNLRPQTPWAAQAVFEIEAAEEDWDAALETLDRVVSAKLIPRDEARRRRAVLLTARAMTA 238

Query: 231 ----ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  +       +  +   ++E++ L      A   AA+      + RK   ++E  
Sbjct: 239 AEAAYGQVGEGRTSALEKATKLSLEAVSLEPKFPPAVALAARLCGETGRARKGMKLIEDA 298

Query: 287 WKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           W   PHP++A+++   +  E+   +  RA  L   N + +ES ++V++ A+       A 
Sbjct: 299 WSDAPHPDLADVWLDMIEGESGYDRATRARVLASRNVDHIESRILVARGAIGARDWAAAR 358

Query: 346 AKA----MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL 401
                      K  P + I  L+A+IE+    +      W   ALHA  DP W    GY 
Sbjct: 359 EALVPYTGAEAKEVPTQCICELMAEIEEGEFGDRGASRSWLTRALHAPADPQWT-GTGYR 417

Query: 402 SSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLP 461
           S  W P++P++      EW  P   P                  +               
Sbjct: 418 SPRWSPVNPVTGEFDALEWSAPL--PMLGRETAAVEPAPAKSTPEPAPVQSAERSIAARE 475

Query: 462 SIKKVSSFE 470
             K  ++ E
Sbjct: 476 EHKSTAAGE 484


>gi|209965650|ref|YP_002298565.1| HemY domain protein [Rhodospirillum centenum SW]
 gi|209959116|gb|ACI99752.1| HemY domain protein [Rhodospirillum centenum SW]
          Length = 472

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 98/469 (20%), Positives = 185/469 (39%), Gaps = 14/469 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +F  I L+I   I ++  P  VSI + + +     + +L  L   + A ++L+ 
Sbjct: 1   MRRAVFFFIKIGLLIALAIWLARNPGSVSIQFQDWMVDMPFWAMLLALAVIIVASVVLYR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V  F +  PA           ++GY AL  G++++AA +   A +           +   
Sbjct: 61  VFSFVVGGPAAFARSRQAAKRERGYHALTQGMVAVAAGDREAASRFARKADT--LLNEPP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A        A +  + MLQ P T    +  L  ++ + GD   A + A +A
Sbjct: 119 LTLLLSAQAAQLAGDDMAARKYFQSMLQRPETEFLGLRGLLTQALKGGDRTEALKLARRA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236
            +I P A W   A+++       W +A   L++             R+R  LL+ R+   
Sbjct: 179 AEIQPKAQWPVLALMELEAKEGHWKQAEEALDRATATKALPQETLRRHRVALLVERARTA 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             +G    +   A  + +   + + A++  A        ++ A   +E+ WK+ PHPE+A
Sbjct: 239 VAEGRSKDALALAQRANEQMPSHVPAAVLVATLRAQAGNRKAATRAIEEAWKIAPHPELA 298

Query: 297 NIYTHLL-----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             +  +        +    +KR   L  ++  +  + V + +  L     DQA      A
Sbjct: 299 EAWGRIEAIFRPGIDPASLVKRYEALVALDPRAAAAYVALGEACLRADLRDQARTHLEKA 358

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS--ALHAMPDPLWIS-DDGYLSSVWLPL 408
             +AP + +F LL ++ +    + + +  W +    LH  PDP+W+    G  ++ W  +
Sbjct: 359 WTLAPTQHVFRLLTELARHEDGDGEAMREWLERSAGLHPDPDPVWVCSACGTPAAGWSAV 418

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKK 457
            P  +     EW+    +     +         + PA    +       
Sbjct: 419 CPSCRGFDTMEWRAAKPALRLADTAPAAILPAASRPAPATTTPDTPAAG 467


>gi|323135815|ref|ZP_08070898.1| HemY domain protein [Methylocystis sp. ATCC 49242]
 gi|322398906|gb|EFY01425.1| HemY domain protein [Methylocystis sp. ATCC 49242]
          Length = 464

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 100/431 (23%), Positives = 187/431 (43%), Gaps = 12/431 (2%)

Query: 13  LVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAML 72
           +V      +   P  +++ +       S  V ++ L   +   I+++A+    +  P  +
Sbjct: 13  VVALGLEWLIEQPGSLTLEFAGWHMEASIPVAVAGLLLLIATVIVVWAIVVALIRLPRRM 72

Query: 73  FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA 132
                +R  ++G   +  GL+++ A ++       +    +     E L  +L  Q A  
Sbjct: 73  AGGSRERRRERGLDVISQGLVAVGAGDLAR--ARKAAALAERLLPGEPLTQMLNAQAAQL 130

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              +  A +    M   P T+   +  L+ E+ R  D  +A  +A  A +I+P  PW   
Sbjct: 131 SGDHQAAAKAFHKMTLKPETKLLGLRGLHIEAKRRQDAEAAHHFAKAAHEIAP-LPWAGS 189

Query: 193 AVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           AV++ +    +W +A   +         +A      RA++  A ++E   +     +   
Sbjct: 190 AVLEHHAAGGDWEKARAAVEANLAAKAIDAATAQNLRAVIETAMAMEKERE-HPHDALRL 248

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENT 307
           A ++LK       A+  AA+ LI    +++A  ++E +W   PHP++A +Y   L  E+ 
Sbjct: 249 ARQALKRRPGFPPAAATAARVLIHHGDRKQALKLIETVWATKPHPDLAEVYFEALPDESN 308

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML--AMKIAPRKEIFLLLA 365
             ++ R  +L  +  ++ ES  I+++ AL      +A        A    P     LL+A
Sbjct: 309 SQRVARIEKLARLAPDAPESRHILAQAALSARDFTKAREALAPLVAAGQHPTAHTCLLMA 368

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK 425
           +IE A +  +  +  W      A  DP WI+ DG +S  WLP+SP+S  L  FEWKIP  
Sbjct: 369 EIEDAQNGPSGPVREWLARGSRAPRDPAWIA-DGVVSKHWLPISPVSGKLDAFEWKIPPH 427

Query: 426 SPEYISSENIN 436
           S ++++ E   
Sbjct: 428 SAQHLTEEGQP 438


>gi|163797972|ref|ZP_02191914.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium
           BAL199]
 gi|159176766|gb|EDP61337.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium
           BAL199]
          Length = 456

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 85/455 (18%), Positives = 164/455 (36%), Gaps = 8/455 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R   Y   +++++   I +   P D+ I W          + + I     +   +   
Sbjct: 1   MRRSFLYIIRLAILVALAIWLVRNPGDIRIDWIGWRLEMPFALFMVITVAVTWVAGIGLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           ++   L  P  +      +  + G++AL  GL +IAA +   AR+            +  
Sbjct: 61  MAAGALGAPWAVMRRRADQRRESGFRALTLGLAAIAAGDAEEARRQAREAD--RLLRDPS 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q A        A      +     T    +  L  ++   GD   +   A +A
Sbjct: 119 LTRLLSAQAAALNGDTAAAARYFAALRDNEDTAFLGIVGLLRQALARGDEARSLELAEEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
             + PDAP V    +     A+ W  A   L    K      ++  R+R+ LL  R+ E 
Sbjct: 179 YAMRPDAPLVATTRLYGRARARRWFDAQVALYDAVKRRIVPEEDGRRHRSALLTERAREA 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                +  +   A ++ +     + A    A+ L    K ++ + ++E+ W  +PHP + 
Sbjct: 239 LAADKLDEALEFAGKARESVPGFVPAVALEAELLGRTGKAKRGQRLIEEAWPKSPHPALT 298

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y  L++E  +  + KR   L +   +  ES + +++ AL+     +A  +        
Sbjct: 299 EAYRGLVTETNLIDRFKRLHALADHAVDHPESRMTIAEAALDAELWGEARVQLEALTGSD 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKT 414
                  L A++E A   +      W + +  A  DP W     G ++  W  +      
Sbjct: 359 LTARACRLRARLEDAEHGDDRAARLWLERSGSAPADPAWTCGSCGAVAPDWSAVCGHCGE 418

Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQ 449
                W +P +     S +  +  +++      L 
Sbjct: 419 FDTVAWTLPPRVSVLSSDDVADLEVDVVEMPHSLP 453


>gi|218662368|ref|ZP_03518298.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
          Length = 428

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 121/356 (33%), Positives = 185/356 (51%), Gaps = 7/356 (1%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
           +          E L+    +++ L E +++ A  K E M   P TRE  +  LY E+ R+
Sbjct: 1   ARSRGLIRADQEPLINCSRLRVRLMEGRHDEARAKFEAMANDPETRELGLRGLYLEARRL 60

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNR 223
           G   +A++YA KA D +P  PW  +A ++    A  W  AI  L Q+K        E NR
Sbjct: 61  GANEAARQYAEKAADNAPYLPWAAQATLEYRSQAGNWDDAIRLLEQQKAARVVEKTEANR 120

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+LL AR+ E  + G+   +  DA+++LKL    + A++ AAK+L  +N  RKA  IL
Sbjct: 121 LHAVLLTARAGERLE-GNPAGARDDALQALKLAAGLVPAALIAAKALFRENGLRKAASIL 179

Query: 284 EKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           E+ WK  PHPEI   Y      ++T+ +LKRA RLE +   +VESL++V++ AL+     
Sbjct: 180 EQAWKSAPHPEIGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFA 239

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402
           +A AKA  A +I PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S
Sbjct: 240 KARAKAEAAARIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVS 298

Query: 403 SVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458
             WLP+SP++  +  FEWK P    E    +    +                 +  
Sbjct: 299 DKWLPVSPVTGRIDAFEWKAPFGQIEGRLEDGSAPAAIETALKTLPPLRDVRPESP 354


>gi|83313522|ref|YP_423786.1| hypothetical protein amb4423 [Magnetospirillum magneticum AMB-1]
 gi|82948363|dbj|BAE53227.1| Uncharacterized enzyme of heme biosynthesis [Magnetospirillum
           magneticum AMB-1]
          Length = 426

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 91/428 (21%), Positives = 169/428 (39%), Gaps = 9/428 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  +  L +   + ++  P +V+I W      T+  V+L++L   L    LL  
Sbjct: 1   MRRFLVFVVLTGLAVAGAVWLADRPGEVTIRWQGWRLDTTVPVLLAVLALLLVGLSLLAR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P             KGY AL  GL + A+ +   A K+     +     +  
Sbjct: 61  LVRAVFGAPGRWLQSRRLGRQRKGYMALSDGLAAAASGDAARAAKLSRKADK--LLKDPA 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           +  LL  Q A      +   ++   M     T       L   + + GD   A+  A +A
Sbjct: 119 VTALLTTQAAQLGGDADQLRDRFRAMTGRKETAFLGHKGLAELALKSGDRAIARDEAARA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            ++ P A  +   ++  +V A  W+ A   L   +++      ++ R  A++L+ R+ E 
Sbjct: 179 FELQPMAADLAVQLLDLHVEAGAWAEAEQVLRLARRHGAVSEADFPRRHALILLGRAEEA 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              GD   +   A ++         A   AA  L  + K RKA  +L+  +K +PHP + 
Sbjct: 239 LRAGDESLALDWAQDARDADPLFTPAITLAADLLRRRGKGRKAASLLKAAFKAHPHPLLI 298

Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +  L   E+ + ++K    L + N  + E  + +++ AL+      A      A +  
Sbjct: 299 TEWRKLGDGESALDRVKSLQELAQANPGAPEGHMALAEAALDAQLWGLARTHLAKAQEQR 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWIS-DDGYLSSVWLPLSPISK 413
           P + +F LLA++E+    +      WT  A   ++P+  W     G+ +  +    P   
Sbjct: 359 PTRAVFALLARVERDERKDEAAANAWTLKAATDSVPESSWTCGGCGHQTPDFALSCPACG 418

Query: 414 TLCYFEWK 421
                EW 
Sbjct: 419 AAGRLEWT 426


>gi|46201304|ref|ZP_00208051.1| hypothetical protein Magn03009978 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 426

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 176/428 (41%), Gaps = 9/428 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  +  L +   + ++  P +V+I W      TS  V+L++L   L A  +L  
Sbjct: 1   MRRFLAFLVLTGLAVAGAVWLADRPGEVTIRWQGWRADTSVPVLLAVLALLLLALSVLIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P      L      KGY AL  GL + A+     AR            H+  
Sbjct: 61  LIRLVFGAPKRWLAALRLSRQRKGYAALSDGLAAAAS--GDAARAAKLARKADKLLHDPA 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           +  LL  Q A      +   E+   M +   T       L   + + GD  +A+  A KA
Sbjct: 119 ITGLLSSQAARLSGDDHQLAERFRAMTERKETAFLGHQGLAELAVKAGDRTTARAEAAKA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236
            DISP AP ++  ++  ++ A  W+ A       +++      ++ R RA++L+ R+ ++
Sbjct: 179 FDISPTAPDLSVLLLDLHMEAGAWAEAEQVARLARRHGSLSEADFTRRRALILLGRAEDS 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              GD   +   A +S         A   AA  L  + K RKA  +L+  +K + HP + 
Sbjct: 239 MAAGDEAQALDWAQDSRDADPQFTPAVALAADLLRRRGKGRKAASLLKSAFKTHAHPLLI 298

Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +  L   E+ + ++KR   L + N  S E  V +++ AL       A +    A+   
Sbjct: 299 AKWLTLGEGESALDRVKRLQDLSQANPASPEGHVALAEAALAAQLWGLARSHLEKALTQR 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHAMPDPLWIS-DDGYLSSVWLPLSPISK 413
           P + +F LLAQ+E+    +      W   A   ++P+P W+    G+ S  +    P   
Sbjct: 359 PTRTVFQLLAQVERDERKDETAAHGWLMKAGTDSVPEPAWVCGGCGHHSPDFALCCPACG 418

Query: 414 TLCYFEWK 421
                EW 
Sbjct: 419 AAGRLEWT 426


>gi|304320180|ref|YP_003853823.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis
           HTCC2503]
 gi|303299083|gb|ADM08682.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis
           HTCC2503]
          Length = 512

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 91/486 (18%), Positives = 189/486 (38%), Gaps = 22/486 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ +  +I+++  +   ++       I +G+        V+           I    
Sbjct: 1   MIRILVFLTIIAVLAAAITGLASVEGFAVIRFGDTNITARSSVLFGAALIGAVLLICATL 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT--FHN 118
           +    +  P+ +     +R  ++G  AL  GL ++AA +   A+++     +Q     + 
Sbjct: 61  ILSGIVRLPSSIRRQRAERRRERGLIALTRGLEAVAAGDASDAQRLARTAQKQLGQQGNE 120

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             L  LL  Q A        A +    MLQ P T    +  LY ++   GD   A++YA 
Sbjct: 121 AGLSRLLTAQAAQLAGDEETAQQSFAAMLQAPETEFLGLRGLYLQAMASGDRKEARQYAE 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSL 234
           +A  + P A W  ++V    +    W  A   L + +++     +   R  A LL A + 
Sbjct: 181 RAFKLRPGASWAFQSVYALQLERGAWGEARDALLKAQQHGLEKGEPSRRREAALLTAMAY 240

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                 D   +  +A E+L+       A++ AA+      ++ +A  +L++ W ++PHP 
Sbjct: 241 GAEAAEDTDTAIKEAEEALRKAPGFAPAAVLAAELETKAGRRSRAGKLLDEAWAISPHPA 300

Query: 295 IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A     + + E    +  R + L     E+ ES +++++    +G   +A A+    + 
Sbjct: 301 LAKTMDEIYAKEKLERRTDRLIALANKRPEADESQLLIAEQENRLGKFTEAKARLEPLLT 360

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
             PR   F  +A   +     ++    W   A +A  DP+  +D  ++            
Sbjct: 361 RNPRARTFSAMAAAVRGLYG-SEAAQIWLDRAANAPLDPVPGADGSFV------------ 407

Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473
                 W+                 L++   +  L+ +        L ++++V++ E +T
Sbjct: 408 -FTTDGWQR-LIREFGDHGRLAPPPLDVIRTSLTLEEVKLLSAPASLDTVQEVAADETAT 465

Query: 474 IHPLDP 479
             P  P
Sbjct: 466 SAPSTP 471


>gi|83594895|ref|YP_428647.1| HemY-like [Rhodospirillum rubrum ATCC 11170]
 gi|83577809|gb|ABC24360.1| HemY-like [Rhodospirillum rubrum ATCC 11170]
          Length = 433

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 87/407 (21%), Positives = 175/407 (42%), Gaps = 10/407 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR++ +  +  L++   + ++ +P  V++ W      TS  V+L  L   +   +    
Sbjct: 1   MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLLITLVVLIGLLLFFSR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                L  P       +++   +G  A+  G+ +    ++ LARK+      +       
Sbjct: 61  FFGGILGIPQWWRRRRNEKKLRRGSLAVGEGIAAARGGDVHLARKLLK--DAERLLPGAA 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
               L    A A  + ++A +   +ML+ P T+      L   +   GDL+ A     +A
Sbjct: 119 GTQQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLDLALTRGDLDKAYAIVREA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
           +    DAPW T  + +  +L ++W+ A + L +      K   +    +A LL  ++ + 
Sbjct: 179 VATGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQARDA 238

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              G    +   + ++++L   S  A++ AA+ L +  ++RKA  +L  +W  +PHP +A
Sbjct: 239 ELPGRGGDALRLSQQAVELDPTSREATLIAARQLAATGRQRKAAQLLIALWAKHPHPSLA 298

Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y  L   E+++  ++ A  L   N E   S  + ++ AL+     +A       ++  
Sbjct: 299 QAYLALWTGEDSLKIVRHAQELTGANPEHPMSRRVFAEAALDAQLWGEARQSLEPLLRDV 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402
           P   I  L+A++E+    +      W + AL A P+   + +DG  +
Sbjct: 359 PSATICRLMARLEEGEKGDVTAANQWLRRALEAGPE---VEEDGVTA 402


>gi|254292446|ref|YP_003058469.1| HemY domain protein [Hirschia baltica ATCC 49814]
 gi|254040977|gb|ACT57772.1| HemY domain protein [Hirschia baltica ATCC 49814]
          Length = 495

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 87/418 (20%), Positives = 165/418 (39%), Gaps = 15/418 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61
           +R++    V+ L I +     + P+DVSI +    Y  S +    ++        + + V
Sbjct: 1   MRIVILLAVVILTIAAVTYAFNAPDDVSIAFNGAEYGMSRYTAGILVIVTGALVAVGWYV 60

Query: 62  SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH--NE 119
               L  P  L     +  + K   AL  GL++    +   A K     +        + 
Sbjct: 61  LSTILRIPFALNRSAKRARFGKARNALADGLIAAEGGDSIDALKKARKSTNLAKSDASDR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L YLL  + A A   ++ A      + +        +  L   + + GDL  A+ +  K
Sbjct: 121 KLSYLLAARAAEANGDWSDAEHAYSDLSREKGAELVGLRGLAAAAIQRGDLRGAETHTRK 180

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLE 235
           AL +  +A W    + +    A +W  A   L     +K  + +   R RA+L  A++  
Sbjct: 181 ALSLKSNASWPFSTLFELQTKAADWESANETLTIGEKRKSIDLEVARRRRAVLHTAQASR 240

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              K     +   A ++ ++  +   A+  AA   ++  K  KA+  +E  W++ PHP +
Sbjct: 241 IRQKA-PEKAERLAADAARMAPSFPPAAYIAASLQLAAGKASKAQASIEGAWRIRPHPAL 299

Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A ++  L  +E T  + KR   L  IN    ES +++ + A+  G  D+A       ++ 
Sbjct: 300 ALLWRDLKTNEPTSARAKRLNALAHINPSHRESRILLVEAAMIQGQWDEAEETLSHVLRE 359

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW--ISDDG----YLSSVWL 406
                +  L+  I      + ++   W++ A  A  +  W  I  DG    +++  W 
Sbjct: 360 GETTRLCTLMEAI-VGGRGDVEQASRWSRLASSAAREADWSDIDPDGRAFNFINEDWA 416


>gi|114568597|ref|YP_755277.1| HemY domain-containing protein [Maricaulis maris MCS10]
 gi|114339059|gb|ABI64339.1| HemY domain protein [Maricaulis maris MCS10]
          Length = 492

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/504 (21%), Positives = 189/504 (37%), Gaps = 37/504 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI       L       ++  P   S  +          V   ++    F  ++++ 
Sbjct: 1   MIRLILAVAFALLTAVLGAFLALNPGHASFEFLGMQTEMPFVVAAGLVILLAFLMLVVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                 + P  +   + +R  ++GY AL   L++ AA +   A +  +            
Sbjct: 61  GIYMLWTSPDKVKGFMGRRRREQGYDALEKALIASAAGDGEAAVRQAARADA--LLDRPA 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  + A +      A    E +L    TR  A   L   S   GD  +   +A  A
Sbjct: 119 LSRLLAARAAESAGNLEGAQVHYEALLNDQKTRVVARRGLAQLSNERGDFAATIDHAGDA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236
              +  A W  +A+    V    W  A+T L     +K+       R R++LL A ++E 
Sbjct: 179 FQQAKGARWAFDALFDAQVAKARWRDALTTLTEGERRKQVAPDTARRRRSVLLTAAAVE- 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           A+  D   +   A+ + +       A+  AA+ L    + ++A  +LE  W   PHP +A
Sbjct: 238 AEGTDSENARELAVSAHRAAPGFAPAAALAARLLADGRRHKRASEVLESAWAAAPHPALA 297

Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-I 354
             +  L   +T   +L+R   L  +N +  ES +++ +IALE G    A A     M   
Sbjct: 298 RAFQDLRKSDTKAKRLERLKTLAALNPDHRESHLVLIQIALEEGDAPAARALLDPMMDGT 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD------GYLSSVWLPL 408
            P   +  L A++ + +  + +    W   A HA  D  W   D       Y    W   
Sbjct: 358 PPSSRLCALAARLARLDGKD-ELARRWMTRASHAGADADWSDIDPEGRLFAYTPDDWK-- 414

Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468
               + +  F  +     P Y   E    ++         ++ L +  +    +  + +S
Sbjct: 415 ----RMVYVFGDENRLTHPRYERFERAAGAVP--------ETALLDAPRPVRSASSRTTS 462

Query: 469 FEDSTIHPLDPHIRQPDDPGIKEQ 492
           F ++T        R PDDPG+ E+
Sbjct: 463 FAEATP-------RMPDDPGVPEE 479


>gi|58616804|ref|YP_196003.1| hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416416|emb|CAI27529.1| Hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str.
           Gardel]
          Length = 413

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/433 (21%), Positives = 177/433 (40%), Gaps = 34/433 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS---PFVILSILYFFLFAWI- 56
           M+  +  F VI+L +   +        V I W N     +      I+++++ F+   I 
Sbjct: 1   MITSVLIFLVIALTVG--LWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIR 58

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           L+F V + F  C         KR  DK    L  G M +   NI  A K    +++ H F
Sbjct: 59  LVFYVCQCFYGC--------KKRRQDKRIILLDQGYMHLNCGNIEKADKC---ITKLHDF 107

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
            +  L +LL+ +      +Y +A +   +    +P         +     +I D +    
Sbjct: 108 DHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIEDQSKQLS 166

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARS 233
              K L+I     W     ++   ++++W+ AI  +++  K K    ++    + ++  +
Sbjct: 167 LFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYA 226

Query: 234 LENADKGDMIASYHDAI---ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           L  A +      Y D +   +++K    +  + ++  A+  I+ NKKRKA  +LE  +++
Sbjct: 227 L--AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRI 284

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +PHP+IA++Y  ++  ++        RL  IN +   S+ ++ + AL +G  D A     
Sbjct: 285 SPHPDIAHLYLEIMHHDSQA----IHRLYNINSDYYFSIYLIVQDALNLGEYDLAMKHLN 340

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISDDGYLSS-VWLP 407
              K      ++ L+ ++ +    +  ++LYWT  A   A+ D  W           W  
Sbjct: 341 NVFKSRTYLSLYFLMLKL-KVLVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNY 399

Query: 408 LSPISKTLCYFEW 420
                K      W
Sbjct: 400 ECDNCKGFNTIVW 412


>gi|57238815|ref|YP_179951.1| hypothetical protein Erum0840 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578744|ref|YP_196956.1| hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57160894|emb|CAH57799.1| putative integral membrane protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417370|emb|CAI26574.1| Hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 413

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 90/433 (20%), Positives = 177/433 (40%), Gaps = 34/433 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS---PFVILSILYFFLFAWI- 56
           M+  +  F VI+L +   +        V I W N     +      I+++++ F+   I 
Sbjct: 1   MITSVLIFLVIALTVG--LWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIR 58

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           L+F V + F  C         KR  DK    L  G M +   NI  A K    +++ H F
Sbjct: 59  LVFYVCQCFYGC--------KKRRQDKRIILLDQGYMHLNCGNIEKADKC---ITKLHDF 107

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
            +  L +LL+ +      +Y +A +   +    +P         +     +I D +    
Sbjct: 108 DHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIEDQSKQLS 166

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARS 233
              K L+I     W     ++   ++++W+ AI  +++  K K    ++    + ++  +
Sbjct: 167 LFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYA 226

Query: 234 LENADKGDMIASYHDAI---ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           L  A +      Y D +   +++K    +  + ++  A+  I+ NKKRKA  +LE  +++
Sbjct: 227 L--AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRI 284

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +PHP+IA++Y  ++  ++        +L  IN +   S+ ++ + AL +G  D A     
Sbjct: 285 SPHPDIAHLYLEIMHHDSQA----IHKLYNINSDYYFSIYLIVQDALNLGEYDVAMKHLN 340

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISDDGYLSS-VWLP 407
              K      ++ L+ ++ +    +  ++LYWT  A   A+ D  W           W  
Sbjct: 341 NVFKSRTYLSLYFLMLKL-KVLVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNY 399

Query: 408 LSPISKTLCYFEW 420
                K      W
Sbjct: 400 ECDNCKGFNTIVW 412


>gi|114329085|ref|YP_746242.1| hypothetical protein GbCGDNIH1_2421 [Granulibacter bethesdensis
           CGDNIH1]
 gi|114317259|gb|ABI63319.1| hypothetical secreted protein [Granulibacter bethesdensis CGDNIH1]
          Length = 434

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/428 (19%), Positives = 160/428 (37%), Gaps = 16/428 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRL-YRTSPFVILSILYFFLFAWILLF 59
           M R+I+     ++V+ +   V+  P  V +T G+ L    S    +  +   + A  LL 
Sbjct: 1   MRRIIKIVLPAAVVVAAAWYVAGLPGHVGMTVGDDLTIDMSVPAAIVAVVILVLAVHLLL 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
                 L  P  +      R    G  A+   L+S+AA +   A +            + 
Sbjct: 61  RAVGAILGLPRTIRRWRQARTRQAGDYAVSRALVSLAAGDAGGAWREAGKARA--CLGDT 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL  + A    + + A +    + +           L  E+    D  SA   A K
Sbjct: 119 AQTLLLMAEAARLSGRESEATQAFHALTRTEDASFLGYRGLLREAITREDWTSAAELARK 178

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A    P A W+    V   +    W  A++                       +     +
Sbjct: 179 AELAHPGAAWLRTERVNLAIRGGRWMDALSLAEN-----------DQQRAAFATAAAQAE 227

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            D       A ++ +L  +   A+I  A +L +  ++R+++ +L K W  +P P++A + 
Sbjct: 228 LDQAEKLRTARQAFRLDPSLTSAAIAYATTLRAAGRQRRSDAVLVKAWAAHPQPDLAVVA 287

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
              ++ + + +++   RL   N    ES +++++  L  G   +A + A  A ++  +K 
Sbjct: 288 LSGVT-DPLTRVRTVKRLVAGNPGHPESHLLLARENLAAGLTGEARSHAEQASRLIDQKR 346

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-DDGYLSSVWLPLSPISKTLCYF 418
           ++LLLA IE+        +    + A  A PDP W     G+ ++ W    P   T    
Sbjct: 347 VWLLLADIEEKEHGPGAAMQAALRRASEASPDPGWRCLHCGHATTHWAAACPACHTPGQI 406

Query: 419 EWKIPTKS 426
            W  P  +
Sbjct: 407 RWTTPGDA 414


>gi|218515793|ref|ZP_03512633.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3]
          Length = 364

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 102/292 (34%), Positives = 157/292 (53%), Gaps = 7/292 (2%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAI 227
           +A++YA KA D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+
Sbjct: 1   AARQYAEKAADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAV 60

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           LL AR+ E  + G+   +  DA+++LKL  + + A++ AAK+L  +   RKA  ILE+ W
Sbjct: 61  LLTARAAEKLE-GNPAGARDDALQALKLAADFVPAALIAAKALFREGGLRKAASILEQAW 119

Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           K  PHPE+   Y      ++T+ +LKRA RLE +   +VESL++V++ AL+     +A A
Sbjct: 120 KSAPHPEVGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARA 179

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406
           KA  A +I PR+  FLLLA IE+A + +  ++ +W   AL A  DP W++ DG++S  WL
Sbjct: 180 KAEAAARIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWL 238

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458
           P+SP++  +  FEWK P    E    +    +                 +  
Sbjct: 239 PVSPVTGRIDAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESP 290


>gi|83945092|ref|ZP_00957458.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851874|gb|EAP89729.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 487

 Score =  262 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 102/502 (20%), Positives = 181/502 (36%), Gaps = 29/502 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL        L     + ++  P  V++ +  +  +    + +  L    F  ++ + 
Sbjct: 1   MIRLTLTVIACVLTAMLAVFLTLNPGLVTVEFLGQTTQAPFALAMGALILAAFVLVVAWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V     S P        +R  D+G+ AL   L++ AA    LA +       +       
Sbjct: 61  VIAKLWSAPEAWKRFSLRRRRDQGFDALERALIASAAGQGDLAVR--QAARAEALLDRPA 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  + A A      A    E ML    TR  A   L   +    D      +A  A
Sbjct: 119 LSRLLAARAAEAAGDLESAQIHYEAMLADAKTRLVAQRGLVGIAQSRSDSQGLLTHAADA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236
            + +  A W  +A+ +  V    W++A   L + ++          R RA+LL A +   
Sbjct: 179 FEQAGRARWAFDALFEAQVNVALWAKAEATLTEGERRGHVDRLVAARMRAVLLTAEAR-R 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +  D   +   A  +         A+  A + L  Q + R+A  ILE  WK  PHP +A
Sbjct: 238 LESADPETAARLADRAATSSPGFAPAAELAGRLLAEQRRHRRAVDILEDAWKHAPHPALA 297

Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             + +L   +T   + +R   L  +N +  ES +++ + AL+ G+ + AH+     ++ +
Sbjct: 298 RAFANLRRSDTKAKRAERLRGLAALNPDHRESRLLLVETALDQGNREAAHSALKPVLETS 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD------GYLSSVWLPLS 409
           P       LA        N +    W   A HA  +  W   D       Y  + W  + 
Sbjct: 358 PVSARACALAARLARLEENPEDAQRWMARASHAPAEADWSDIDEGGQAFNYTDADWKRMV 417

Query: 410 PISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469
                            P +   E    +          +++L + +     S K+  + 
Sbjct: 418 ESWGRDGVL------IHPRHERYEVAAAAAP--------ETVLIDARPTAERSAKRSEAG 463

Query: 470 EDSTIHPLDPHIRQPDDPGIKE 491
           +    +   P +  PDDPG  +
Sbjct: 464 DKQGPNFYVP-VPAPDDPGASD 484


>gi|218679767|ref|ZP_03527664.1| putative transmembrane protein [Rhizobium etli CIAT 894]
          Length = 280

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 5/281 (1%)

Query: 32  WGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG 91
           W  ++Y+T   V  S +   + A +L++   R   + P  +      R  D+GY+AL TG
Sbjct: 1   WEGQIYQTKLIVAASAIIALIAAVMLVWWFIRLVWTSPHSVTRYFRARKRDRGYQALSTG 60

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L++  A N  LARKM +          E L+ LLE Q AL E +++ A  K E M   P 
Sbjct: 61  LIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRHDEARAKFEAMANDPE 120

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           TRE  +  LY E+ R+G   +A++YA KA D +P  PW  +A ++    A  W  AI  L
Sbjct: 121 TRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLEYRSQAGRWDDAIRLL 180

Query: 212 NQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            Q+K        E NR  A+LL AR+ E  + G+   +  DA+++LKL  + I A++ AA
Sbjct: 181 EQQKAARVVEKAEANRLHAVLLTARAGERLE-GNPAGARDDALQALKLAADFIPAALIAA 239

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           K+L  +   RKA  ILE+ WK  PHPEI   Y    S ++ 
Sbjct: 240 KALFREGGLRKAASILEQAWKSAPHPEIGQAYVRARSGDST 280


>gi|114798425|ref|YP_761904.1| HemY domain-containing protein [Hyphomonas neptunium ATCC 15444]
 gi|114738599|gb|ABI76724.1| HemY domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 478

 Score =  239 bits (610), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 151/389 (38%), Gaps = 9/389 (2%)

Query: 15  ICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFH 74
                     P +V+   G  +      V   +L  F     L + ++   L  P  +  
Sbjct: 18  AVLAWWAFSLPGEVTFPVGQEIVSVRAGVAAILLLVFGGLIALAWWLATGILVLPGRISK 77

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
                   K   AL  GL++    +   A ++     +     +E L  LLE + A A  
Sbjct: 78  AQRLSRARKANAALAEGLLAAEGGDSKAALRLARKSMRHA--EDERLKLLLEARAAEAND 135

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            +  A     ++ ++P  +   +      +   GD  +A+  A +AL++  DA W   ++
Sbjct: 136 DWAGAERAWGLLTRLPGGQLAGLRGSATAASERGDPLTAETRAREALELRSDADWPFNSL 195

Query: 195 VQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
               V   +W +A+  L     +         R RA+L  AR++         A    A 
Sbjct: 196 FDIQVAKGDWDKALDTLAMGEKRGLVEGINLKRRRAVLFTARAVNLPIAEKPAAQKSLA- 254

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           ++++   +   A+   A+ L+   K + A+ +LE  WK  PHP +A +   L+ ++T   
Sbjct: 255 DAIRSAPDFPPAAYHGARFLMVDGKAKAAQGVLELGWKARPHPALAQLSRRLVPQDTREN 314

Query: 311 L-KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           +  R   L + +    ES ++ ++++++     +A     L ++  P   + LL+ +  +
Sbjct: 315 IAARLKALVDAHPSHRESRILAAELSMDSADWVEAIKTLALLVEENPTARLCLLMERALK 374

Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDD 398
               +  +   W + A+ A  +  W   D
Sbjct: 375 G-YGDLGEAQRWGRMAVSASREADWSDID 402


>gi|73666713|ref|YP_302729.1| hypothetical protein Ecaj_0080 [Ehrlichia canis str. Jake]
 gi|72393854|gb|AAZ68131.1| putative Uncharacterized membrane-bound protein [Ehrlichia canis
           str. Jake]
          Length = 413

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 86/429 (20%), Positives = 171/429 (39%), Gaps = 26/429 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+  +  F +++L I   + V      ++I W       +      ++  FL   ILL  
Sbjct: 1   MITSLLIFVIVALTIG--LWVIDCDGIITIDWLGYDIEVNILFTFFVVAVFLLVLILLVR 58

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +     L+        +K    L  G M +   ++    ++   +++  +F +  
Sbjct: 59  LVFCLIQS---LYRYRRDS-QNKKMILLEQGYMYLNCGDVE---RVEKIITKLGSFDHPS 111

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATK 179
             YLL+ ++    R+Y +A +      + +P         L     +  D         K
Sbjct: 112 -FYLLKGRVCFDNRKYGLAEKYFGQFAKIVPMIDASLGVHLLNVISQEEDQIQQLSLLRK 170

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENA 237
            L+I     W     ++ Y L+++WS AI  + +  K K    +N    + +   +L  A
Sbjct: 171 MLEIFYKQSWSAIFKLEIYRLSRDWSNAIEEIKKVIKLKVNLPYNVQDMLNIFYYAL--A 228

Query: 238 DKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            +   +  Y D ++ L    N    S    +  A+  ++ ++KRKA  ILE  ++ NPHP
Sbjct: 229 KQCYDVQRYDDGLKVLDNIKNCQKYSTPIVLLKAQCYLNTDRKRKAVSILEYEYRTNPHP 288

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +IAN+Y  ++  N+        +L   N E   S+ ++++ A+ +G  D A        K
Sbjct: 289 DIANLYLDIMQHNSHA----IHKLYSFNTEYYFSIYLIARDAINLGEYDAAMKYLNNEFK 344

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLSPI 411
                 ++ L+ ++ +  S + +++LYWT   A  A+ +  W       +S+ W      
Sbjct: 345 TQTYISLYFLMLKL-KVLSQDYNELLYWTDKIAKDAISEQHWSCTKCQCVSTRWHYECDN 403

Query: 412 SKTLCYFEW 420
            K      W
Sbjct: 404 CKGFNTIVW 412


>gi|295687520|ref|YP_003591213.1| HemY domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295429423|gb|ADG08595.1| HemY domain protein [Caulobacter segnis ATCC 21756]
          Length = 511

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 164/406 (40%), Gaps = 10/406 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++   F+++ V  S + ++  P   S+ W       +      +  F    + +L+ 
Sbjct: 1   MTRVVFALFLVAAVAVSVLALTGEPGRASLEWMGWRIEMTAAAAALLTLFSALLFTVLWR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
              + +  P        +    +  +AL  G +++AA +   AR++    S +       
Sbjct: 61  GVIWIVEAPRRAARARAEAKRKQAIEALTRGFLAVAAGDGSEARRLAQK-SAELAEDAPG 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV +L  Q A A      A      ML  P  R   +  L   +   GD  +A R+A  A
Sbjct: 120 LVRVLAAQAAEAAGDRGAAASAYNAMLGFPEMRLAGLRGLMQAALADGDKITALRHAETA 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236
             ++  A W   A+++  + A +W+ A+      L +K  +     R+RA LL A +   
Sbjct: 180 YGLARTARWAWRALLEARLEAGDWAAALQLVQGALERKIVSPAVAERSRAALLAASAASL 239

Query: 237 ADKGDMIA---SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            +  D  A   +   A +S+KL  +     I AA+ L  + K  KA  ++E  WK  PHP
Sbjct: 240 EESPDPKARAQALDFANQSVKLKPDFAPGVIMAARLLADEGKTAKAGQLIETAWKAQPHP 299

Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   Y  L  +E    + +R   L  +  E  ESL++  + AL  G    A A A L  
Sbjct: 300 ALWLAYRDLKTNETPKARAQRLAALAAMRPEVRESLILRVEAALVGGDPIAARAAARLLD 359

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398
             AP      L+A++  AN    +    W    + A  +P W   D
Sbjct: 360 DEAPTARFAGLMARVAAANGQADE-ARAWIARGIDAPREPDWSDLD 404


>gi|16124330|ref|NP_418894.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15]
 gi|221233012|ref|YP_002515448.1| HemY domain membrane protein [Caulobacter crescentus NA1000]
 gi|13421172|gb|AAK22062.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15]
 gi|220962184|gb|ACL93540.1| HemY domain membrane protein [Caulobacter crescentus NA1000]
          Length = 511

 Score =  229 bits (584), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 164/406 (40%), Gaps = 10/406 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R+    F++++V  S + ++  P   S+ W       +      +  F    + LL+ 
Sbjct: 1   MTRVAFALFLVAVVAVSVLALTGEPGRASMEWMGWRVEMTAAAAALLTLFSALMFTLLWR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
              + +  P        +    +  +AL  G +++AA +   AR++    S +       
Sbjct: 61  GVIWIVEAPRRAARARAEAKRKQAIEALSRGFLAVAAGDGSEARRLAQKSS-ELAEDAPA 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV +L  Q A A      A      ML  P  R   +  L   +   GD  +A R+A  A
Sbjct: 120 LVRVLAAQAAEAAGDRGAAKSAYNAMLGFPEMRLAGLRCLMLAAQAEGDRQTAIRHAETA 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236
             ++  A W   A+++  + A +W+ A+      L +K  +     R+RA LL A +   
Sbjct: 180 YGLARTARWAWRALLEARLEAGDWAAALQLVQGALERKIVSPVVAERSRAALLAASAASL 239

Query: 237 ADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            +  D      +   A +S+KL  +     + AA+ L    K  KA  ++E  WK  PHP
Sbjct: 240 VNADDPKTRAQALDFATQSVKLKPDFAPGVVMAARLLAEDGKTAKAGGLIETAWKAEPHP 299

Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   Y  L  +E    + +R   L  +  E+ ES ++  + AL  G    A A A L  
Sbjct: 300 ALWLAYRDLKTNETPKARAQRLAALAAMKPEARESRLLRVESALIGGDPVAARAAARLLD 359

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398
             AP      L+A++  A + + D+   W    + A  +P W   D
Sbjct: 360 DEAPTARFAGLMARVAAA-NGDADEARAWIARGVAAPQEPDWSDLD 404


>gi|218507798|ref|ZP_03505676.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
          Length = 240

 Score =  229 bits (584), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 4/240 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+ +  ++ L+   F   +  P D+S+ W  ++Y+T   V +S +   + A ++++ 
Sbjct: 1   MIRLVVFALLVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R   + P  +      R  D+GY+AL TGL++  A N  LARKM +          E 
Sbjct: 61  FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ LLE Q AL E +++ A  K E M   P TRE  +  LY E+ R+G   +A++YA KA
Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236
            D +P  PW  +A ++    A  W  AI  L Q+K        E NR  A+LL AR+ E 
Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 240


>gi|329848281|ref|ZP_08263309.1| hemY protein [Asticcacaulis biprosthecum C19]
 gi|328843344|gb|EGF92913.1| hemY protein [Asticcacaulis biprosthecum C19]
          Length = 515

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 97/491 (19%), Positives = 165/491 (33%), Gaps = 27/491 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R +     I+ +I   I +   P   S++W N          + I+    F  +  + 
Sbjct: 1   MIRSLLILLAITTLIVLTIGMVGDPGLASLSWMNYRIDIPATAAVIIIGVMAFCAVAFWN 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           ++ +    P         +   +G  AL  G M++A  +   AR+    V       N  
Sbjct: 61  LALWLARSPQRAERARADQRRRQGDDALTRGFMAVAVGDGSEARR--HAVKALDLSDNTV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV +L    A               M+ +P  +   +  L   + R GD   A + A +A
Sbjct: 119 LVRILGAMAAEESGDAVATRTAYSAMVSVPELKLAGLRGLMQLAARQGDKAEAVKLAGEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236
            +    + W  E +    + A EW+ A+      L +K  +     R +A L+ A +   
Sbjct: 179 YNQPRPSMWAFETLFAARLEAGEWAEALDLIEGALTRKLISPIFSERAKASLMAASAARL 238

Query: 237 ADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
               D      +   A  + KL      A+I AA+ L   NK  +AE +LE  W   PHP
Sbjct: 239 ETSDDAQMRDQALDYAQRAAKLQPQFTPAAIIAARLLAKANKPGRAEDVLEAAWASRPHP 298

Query: 294 EIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIAL----EMGSIDQAHAKA 348
            +   Y  L+S+ T   + +R   L + N +  ES ++  + AL    +        A  
Sbjct: 299 AVWLAYRDLVSDETPKERARRLQGLVDRNAKHRESRLLQVERALLTNTKAEIAAALAALE 358

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD------GYLS 402
             + +    K I  ++A+  Q    + D    W   A  A  +  W   D       Y +
Sbjct: 359 EDSAEANLTKRICGVIARGAQG-LGDYDTARVWIAKAASARGEADWSDIDAEGKAFAYSA 417

Query: 403 SVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPS 462
           + W  +         F        P Y   +     +    P          G       
Sbjct: 418 ADWSDVILN------FAETAALSHPRYERGDKGLPEIPDMPPRYVPSMPFIKGPARRGSV 471

Query: 463 IKKVSSFEDST 473
               S   D  
Sbjct: 472 RTDPSHMPDDV 482


>gi|167644094|ref|YP_001681757.1| HemY domain-containing protein [Caulobacter sp. K31]
 gi|167346524|gb|ABZ69259.1| HemY domain protein [Caulobacter sp. K31]
          Length = 515

 Score =  219 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 86/406 (21%), Positives = 161/406 (39%), Gaps = 10/406 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R    FF+++ +  + + ++  P   S+ W       +      +  F      +L+ 
Sbjct: 1   MIRAAIVFFLVAAIAVAVVALTGEPGVASLDWMGWRVEMTAAAAALLTLFTALLATILWR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
              + +  P        +    +G +AL  G +++AA +   AR++      +       
Sbjct: 61  ALLWVIEAPQRAARARAEAKRKQGVEALSRGFLAVAAGDGSEARRLAQKA-AELAEDAPA 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ +L  Q A A   +  A +    ML  P  R   +  L   +   GD   A ++A  A
Sbjct: 120 LIRVLAAQAAEAAGDHTAARQAYNAMLGFPEMRLAGLRGLMQTALAEGDKGLALKHAETA 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236
             ++  A W   A+++  + A +W  A+      L +K        R RA LL A +   
Sbjct: 180 YGLAKTARWAWRALLEARLEAGDWKAALDLVQGALERKIVPPLVAERARAALLAASAASL 239

Query: 237 ADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            +  D      +   A+++ +L  +     + AA+   +  K  KA  ++E  WK++PHP
Sbjct: 240 EESDDPKTLAQALDFAVQAARLKPDFAPGVVMAARLQAADGKAAKAGSLIEAAWKLSPHP 299

Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   Y  L  SE    +  R   L  +  E+ ES ++  + AL  G    A A A L  
Sbjct: 300 ALWLAYRDLKTSETPKLRAARLAALAGLKPEARESRLLKVESALIGGDPVAARAAARLLP 359

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398
           +      +  L++++  A +   D+   W    + A  +P W   D
Sbjct: 360 EEGLTARVAGLMSRVAYA-NGEADEARAWIARGVAAAQEPDWSDLD 404


>gi|315497774|ref|YP_004086578.1| hemy domain protein [Asticcacaulis excentricus CB 48]
 gi|315415786|gb|ADU12427.1| HemY domain protein [Asticcacaulis excentricus CB 48]
          Length = 515

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 77/395 (19%), Positives = 141/395 (35%), Gaps = 15/395 (3%)

Query: 16  CSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHM 75
                 +  P   ++ W      T     + ++    FA +  + +  +    P      
Sbjct: 16  AVAFAAAGDPGTATLIWLGYRIDTPAAAAVIVIGLLAFAAVCFWNLVLWMSRAPQRAERQ 75

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
                  +G + L  G +++ + +   AR+        H   N  LV +L    A     
Sbjct: 76  RANARRRQGEETLTRGFIAVVSGDGAEARRQAIKAVDLH--DNVALVRILNALAAETAHD 133

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
                     ML +P  +   +  L   +   GD   A R A +  +    A W  + + 
Sbjct: 134 PVATRAAWTAMLSVPELKLAGLRGLMALAISEGDRTEAIRLAAEGYNQPKPAMWAFKTLF 193

Query: 196 QQYVLAKEWSRAITFLNQKKKNA------KEWNRNRAILLIARSLENADKGD-MIASYHD 248
           +    A EW+ A+  +              E  R   +   A  LE A +G     +   
Sbjct: 194 EARSTAGEWAEALDLVEGALNRKLVSPLFAERARAALMAASAARLEGAAEGQIREQALDY 253

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           A+ + KL       ++ AA+ L + NK  +AE +LE  +   PHP I   Y  L+++ T 
Sbjct: 254 AVRAAKLQPMFAPGAVIAARLLAAHNKLGRAEDVLEAAYAAQPHPAIWLAYRDLVNDETP 313

Query: 309 -GKLKRALRLEEINKESVESLVIVSKIALEMG---SIDQAHAKAMLAMKIAP-RKEIFLL 363
             + +R   L + N +  ES ++  + ++  G    I++A A     +      + +  L
Sbjct: 314 KDRARRLQGLIDRNPQHRESRLLEVERSVLSGVRADIERATAALEDELTEERLTRRLCGL 373

Query: 364 LAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398
           +A+   A   + D    W   A  A  +P W   D
Sbjct: 374 MAKAALA-LQDVDGARGWVAKASLAKAEPDWSDLD 407


>gi|68171287|ref|ZP_00544688.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658307|ref|YP_506957.1| HemY domain-containing protein [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67999302|gb|EAM85950.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599764|gb|ABD45233.1| HemY domain protein [Ehrlichia chaffeensis str. Arkansas]
          Length = 416

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 87/432 (20%), Positives = 167/432 (38%), Gaps = 29/432 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+  +  F +++L I   + V      + I W       +    L ++       ILL  
Sbjct: 1   MITSVLIFVIVALTIG--LWVIDCDGIIRIDWLGYDIEVNILFTLFVIAVVFLLLILLVR 58

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F  C   ++        +K    L  G M +   ++    ++   + +   F +  
Sbjct: 59  FIFCFSRC---VYRYKRD-LQNKKMVLLEQGYMYLNCGDVE---RVEKIIVKIGNFDHPS 111

Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L +LL+ ++     +Y +A +   + +  +P         L     +I D         K
Sbjct: 112 L-FLLKGRVYFDTGKYILAEKYFTQFVKVVPVIDASLGIHLLNVIMQIEDQIQQLSLLRK 170

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKE--WNRNRAILLIARSLE 235
            L+I     W     +  Y ++++W  AI  + +  K K      +N    + +   +L 
Sbjct: 171 MLEIFFKQSWSAIFKLTIYRISRDWGNAIEEMKKIIKLKINLPLPYNTQEMLNVFYYAL- 229

Query: 236 NADKGDMIASYHDAI---ESLKLCDN--SIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            A +   I  Y D +   +++K C    S   ++  AK  I  +KKRKA  ILE  +++N
Sbjct: 230 -AKQCYDIQKYDDGLRVLDNIKNCSQQCSTAVTLLKAKFYIDTDKKRKAVNILEHEYRIN 288

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           PHP+IAN Y  ++  ++        +L   N     S+ ++++ A+  G  D A      
Sbjct: 289 PHPDIANFYLDIMQHSSHA----IHKLYSFNTGYYFSIYLIAQDAINSGEYDTAMKYLNH 344

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWISDDGYLSSV-WLPL 408
           + K      ++ L+ ++ +  S N +++LYWT   A  A+ D  W       +   W   
Sbjct: 345 SFKTKTYISLYFLVLKL-KVLSQNYNELLYWTDKIAKDAIADKYWSCTKCKYTPTCWHYE 403

Query: 409 SPISKTLCYFEW 420
               K+     W
Sbjct: 404 CDGCKSFNTIIW 415


>gi|261884328|ref|ZP_06008367.1| hypothetical protein CfetvA_03481 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 266

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 4/227 (1%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                + RA LL A+++   D      +   A+E+ KL  + + A++ AA++L +  + R
Sbjct: 9   KDVVKKERAALLTAKAMATLD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIR 67

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIAL 336
           K   ILE  WK  PHP+IA+ Y +  S +T   +LKRA  L  +   + E  + +++ A 
Sbjct: 68  KGSKILEAAWKRFPHPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAY 127

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS 396
           E G    A   A   ++ APR+  +LLLA IE+A + +  K+  W   A+ A  DP W +
Sbjct: 128 EAGEYSVARDNAEQVLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA 187

Query: 397 DDGYLSSVWLPLSPISKTLCYFEWKIP-TKSPEYISSENINFSLEMA 442
            D Y+   W P+SP++  L  FEWK+P  +    I  E       +A
Sbjct: 188 -DCYVCEQWSPVSPVTGRLNSFEWKVPVVELAPAIEVEKPEIKAPLA 233


>gi|197106863|ref|YP_002132240.1| hypothetical protein PHZ_c3402 [Phenylobacterium zucineum HLK1]
 gi|196480283|gb|ACG79811.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 504

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 81/406 (19%), Positives = 141/406 (34%), Gaps = 10/406 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R    FF+++ V  + + ++  P   S+ W       +    + I         + + 
Sbjct: 1   MIRAAIVFFMVAAVAVAVLALTGDPGRASVVWLGWRADMTAAAAILIALLASLLAAVAWR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
              + L  P        +    +    L  G ++ A  +   AR++              
Sbjct: 61  TVLWILDAPQRAERARAEARRRQASDVLSRGFLAAAGGDGSEARRLARKA-ADLASDAPG 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV +L  Q A A    + A      ML  P  R      L   +   G   +A R+A +A
Sbjct: 120 LVRVLAAQAAEAAGDLDEARAAYTAMLGFPEMRLAGHKGLMQLAAAQGARETALRHAQEA 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENA 237
              +  A W   A+++  + A +W +A+  +                    L+A S    
Sbjct: 180 YGEARTARWAWRALLEAKLEAGDWPQALDLMKGALDRKIVPPVVAERARAALLAASAAQL 239

Query: 238 DKGDMIASY----HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +      +       A+E+ KL        + AA+ L    K  +A   +E  W+V PHP
Sbjct: 240 EHAPEPKARALAMDHAVEAAKLAPGFAPGVVMAARLLAQAGKVGRAAATVENAWRVAPHP 299

Query: 294 EIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   Y  L ++ T   + +R   L  +N    ESL++  + AL  G    AH  A    
Sbjct: 300 ALWLAYRDLRTDETPRERAQRLSELAAVNPTHRESLILHVERALIAGEPAAAHEAAGALE 359

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398
                  I  L+A+   A     +    W    + A  +P W   D
Sbjct: 360 AEPVTARIAGLMARAAFAAGAPDE-ARVWLARGISAPHEPDWSDLD 404


>gi|23004378|ref|ZP_00047740.1| hypothetical protein Magn03000405 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 250

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 7/253 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R + +  ++++     + ++ +P  V++ W       S  + L+ +        +++A
Sbjct: 1   MWRALVFLALLAIAAYGAVWIADHPGSVTVVWNGYEIGMSLAIALTGVLVAAIIIGIIWA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  PA +     +R  +KG  +L  G++++ + +   AR+       +    ++ 
Sbjct: 61  IMSGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+ Q A        A +  + M   P TR   +  L+ E+ R  D  +A+ YAT+A
Sbjct: 119 LTLLLKAQAAQISGDREAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYATEA 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236
             ++P   W  EAV++      EWS A   + ++      +     R RA+LL A + ++
Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRASLGLMDKSVARRQRAVLLTA-AAQS 237

Query: 237 ADKGDMIASYHDA 249
            + G+   +   A
Sbjct: 238 HEAGEPETATEQA 250


>gi|294085039|ref|YP_003551799.1| HemY domain-containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664614|gb|ADE39715.1| HemY domain protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 445

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/442 (18%), Positives = 152/442 (34%), Gaps = 16/442 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++RL   F  I     S   ++  P  V + W          + ++++  F    +    
Sbjct: 2   LIRLAVLFLFILAAAASASWLAAQPGHVQVEWLGWRLEMRTSLAVALVIIFALGMVFFDR 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   S P  L   + KR    G+KAL  GLM+++A               +       
Sbjct: 62  LYRLIKSLPGWLGSSVQKRRDVAGHKALTLGLMAVSAGEPAE--AKRQAARARRLLDAPQ 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q +     +  A      ++    +       +   +      ++A   A KA
Sbjct: 120 LTNLLAAQASALAGDHQAARRYFTSLIAEDDSAFLGHIGMMRLALDDDAPDAALASARKA 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSR---AITFLNQKKKNAKEW--------NRNRAILL 229
           L + P +      +VQ       W     A+  L  ++++ +             R  LL
Sbjct: 180 LALRPKSTLAAAHIVQLEAARHNWQAALPALDVLASQRRSGQSGSDEDGNNIQSQRTALL 239

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              + E+A   D   +    I  +K     + A +  +   +     RKA  +LEK + +
Sbjct: 240 YMDACEHAQNADRQGAQKVLIRIIKDVPGFLPAVLMLSDIYLETGANRKAVKVLEKAFGI 299

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKA 348
            PH E+AN        N  G + + + L   +++ +  +  I++  AL++G   +A  + 
Sbjct: 300 IPHIEVANRLKPAWQVNDGGFIAKLMTLIPADEDIADAARCIIANQALDVGLDGEAAGQI 359

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407
               +     + + + A+I QA   + D       +A  A     W       L   W  
Sbjct: 360 TAIPESRRDADAWQVAARIAQA-HGHQDDANAALVAASKAPRPQGWQCGACRSLHDDWQS 418

Query: 408 LSPISKTLCYFEWKIPTKSPEY 429
             P   +     W+ P +    
Sbjct: 419 HCPDCDSFAQLVWQRPDRVTPL 440


>gi|83310058|ref|YP_420322.1| hypothetical protein amb0959 [Magnetospirillum magneticum AMB-1]
 gi|82944899|dbj|BAE49763.1| Uncharacterized membrane-bound protein [Magnetospirillum magneticum
           AMB-1]
          Length = 469

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 87/438 (19%), Positives = 149/438 (34%), Gaps = 15/438 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +LRLI     +S V+ + +  S     V + W      T+  V+L IL      +  L  
Sbjct: 2   LLRLIVLLIFMSPVVLATLWFSDNAGTVQVEWLGWHVDTNVPVLLGILLAVFMLFSGLTR 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +S      PA L      R  +KG  AL   L +  + ++   R++ +  +      +  
Sbjct: 62  LSALVADLPAKLGKSRQARGREKGMLALLAALDAAESGDVGDGRRLGAEAA--RLLDSPE 119

Query: 121 LV----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           L      L+    A           K  +  + P                          
Sbjct: 120 LAARLDRLIPRPAAPPAATLRPEPAKGRLFAKKPPAPPVVEREPPPPVKAAPPPAPVAVV 179

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAKEWNRNRAILLIAR 232
            T A    P A        +      EW+ A       L+  + +     R RA++L  +
Sbjct: 180 ETPAAPADPSAEDAAAFAAKLR--DGEWAAAQACIDATLSAGRLSPALAARWRAVVLEGQ 237

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     + D   S   A E+L      + A++   +  +S+ ++ +AE +L  +W+  P 
Sbjct: 238 AC-LDSQDDPARSLRLAREALAADPGFLPAALHVLRQEVSEGRRSEAEAVLAAVWRSAPA 296

Query: 293 PEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             +    + L  E+    +LKR   L E      E  +   + A+       A    M A
Sbjct: 297 RILLETCSPLWREDDAESRLKRLEVLAEWAPHDPEGHLAAGEAAVAAAKWGVARRHLMAA 356

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSP 410
           +KIAP      L+A+IE       ++   W +    A   P W+ +  G  S  W P   
Sbjct: 357 LKIAPDALGCRLMAEIEDKEPGGAERAEIWRRREREAPAAPTWVCEACGATSGSWAPYCS 416

Query: 411 ISKTLCYFEWKIPTKSPE 428
                   +W  P   PE
Sbjct: 417 ACAAGAAIQWTRPAHKPE 434


>gi|78033476|emb|CAJ30093.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1]
 gi|144901138|emb|CAM78002.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 449

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 84/455 (18%), Positives = 155/455 (34%), Gaps = 23/455 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +LRLI     +S V+ + +  S     V + W      ++  V+L+++      +  L  
Sbjct: 2   LLRLIVLLIFMSPVVFATLWFSDNVGSVQVEWLGWHVDSNMPVLLAVILVVFLIFSALSR 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +S      P+ L      R  +KG  AL   L +  + ++   R+  +  +     +N  
Sbjct: 62  LSALVADLPSKLGKSRQARGLEKGMSALLAALDAAESGDVGEGRRFAAEAA--RLLNNPG 119

Query: 121 LV----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           L      LL    A       +A  +LE        R+                   ++ 
Sbjct: 120 LAARLDRLLPRPPAQ-----PVAPTRLEAAKGRLFARKPGPPPPPTPVVDKIQPVVVEKL 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIAR 232
           A      S +      A +     A EW  A  ++ +     +       R R++ L  +
Sbjct: 175 AAAPAGPSREDLEAFSAKI----RAGEWGAAQAWIGEAVLAGRLTPLVAARWRSVALEGQ 230

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +LE A  GD       A E++      +  ++   ++ +S+ +K +AE +L  +W   P 
Sbjct: 231 ALE-ASPGDPARPLRLAREAMAADQTFLPPALHVIRAEVSEGRKAEAETLLASVWPHVPA 289

Query: 293 PEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             + +    L  +      LKR   L  I     +  +   + A  +     A    M A
Sbjct: 290 RVLLDACAPLWRDEDQDACLKRLEALAAIAPHHPDGHLAAGEAAFAVQKWGVARRHIMAA 349

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK-ILYWTQSALHAMPDPLWISDDGY-LSSVWLPLS 409
           +KIAP      L+A+IE+     + +    W +    A   P W+      +   W    
Sbjct: 350 LKIAPDALGCRLMAEIEEREPGGSARSAEIWRRREHEASLSPAWVCGACARVVEAWAACC 409

Query: 410 PISKTLCYFEWKIPTKSPEYISSENINFSLEMAYP 444
           P    +   EW    K+ E +       S      
Sbjct: 410 PSCAGVATIEWTRSVKAEEALLPPATTASSMETPR 444


>gi|46202657|ref|ZP_00208607.1| hypothetical protein Magn03007324 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 471

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 89/241 (36%), Gaps = 7/241 (2%)

Query: 200 LAKEWSRAIT----FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              EW+ A       L+  + +     R R ++L  ++     + D   S   A E+L  
Sbjct: 203 RDGEWAAAQACIDATLSAGRLSPALAARWRVVVLQGQAC-LDSQDDPARSLRLAREALAA 261

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRA 314
               + A++   +  +S+ ++ +AE +L  +W+  P   +      L  E+    +LKR 
Sbjct: 262 DPGFLPAALHVLRQEVSEGRRSEAEAVLAAVWRSAPARILLETCAPLWREDDAESRLKRL 321

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
             L E      E  +   + A+       A    M A+KIAP      L+A+IE      
Sbjct: 322 EALAEWAPHDPEGHLAAGEAAVAAAKWGVARRHLMAALKIAPDALGCRLMAEIEDKEPGG 381

Query: 375 TDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSE 433
            ++   W +    A   P W+ +  G  S  W P           +W  P   PE   + 
Sbjct: 382 AERAEIWRRREREAAAAPTWVCEACGATSGSWAPYCSACGAGAAIQWTRPAHKPENPPTP 441

Query: 434 N 434
            
Sbjct: 442 A 442



 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 2/126 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +LRLI     +S V+ + +  S     V + W      T+  V+L IL      +  L  
Sbjct: 4   LLRLIVLLIFMSPVVLATLWFSDNAGTVQVEWLGWHVDTNIPVLLGILLAVFMLFSGLTR 63

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +S      PA L      R  +KG  AL   L +  + ++   R++ +  +      +  
Sbjct: 64  LSALVADLPAKLGKSRQARGREKGMLALLAALDAAESGDVGDGRRLGAEAA--RLLDSPE 121

Query: 121 LVYLLE 126
           L   L+
Sbjct: 122 LAARLD 127


>gi|58584738|ref|YP_198311.1| membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58419054|gb|AAW71069.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
          Length = 387

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 87/229 (37%), Gaps = 14/229 (6%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++   L ++W  AI+ L +  K       +  +  A+   A + +   KG+   +     
Sbjct: 163 IEHCALQEDWVNAISRLKEAIKFNVFLPFDCKKMLAVFYCALAKQYESKGNFKEAVKSLF 222

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            +   C      +   A+  I   K RKA  +LE  + VNP P+ A IY  L SE     
Sbjct: 223 RAQSYCVTFQPINYLKAELYIRLGKIRKASAVLEAEYTVNPTPQSAKIYISLNSEG---- 278

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
              A RL  +  +   S  +++  ++  G  D A      A+K A    I+L++ Q++  
Sbjct: 279 ---AERLYNLRPDYYFSYCLLASSSISSGKYDLASQYLNTAIKKANYMSIYLIMVQLKVV 335

Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417
                D+ +YW       A+PDP W   +       W            
Sbjct: 336 -LQEQDQTIYWLSKMGSEALPDPCWKCKNCNKELERWDYKCSSCNGFNC 383


>gi|58698408|ref|ZP_00373319.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630891|ref|YP_002727682.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp.
           wRi]
 gi|58535063|gb|EAL59151.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592872|gb|ACN95891.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp.
           wRi]
          Length = 406

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 14/229 (6%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++  +L ++W  AI  L +  K+      +     A+   A + +   KG+   +     
Sbjct: 181 IEHCILKEDWINAILRLKEAVKSNIFLPFDHKEMFAVFYCALAKQYESKGNFKEAIKSLF 240

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            + +        +   A+  I   K RKA  +LE  + VNP P+ A +Y +L S      
Sbjct: 241 RAQRYSAIFQPINYLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS------ 294

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            K A RL  +  +   S  +++  ++  G  D A      AMK A    I+ ++ Q+ + 
Sbjct: 295 -KGAERLYNLRPDYYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KV 352

Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417
                DK++YW       A+PDP W   +       W        +   
Sbjct: 353 TLQEHDKVIYWLNKMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 401



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           +I +       +   I V    E + +  GN       + I+      LF   LL  + R
Sbjct: 1   MIYFIIFAFSFLFG-IWVKVSGEVIKLELGNYTISIDLYFIIFTCVVLLF---LLITLVR 56

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
           FF S  +   ++ + R  D+    L+    SI   NI  A+K+   +S++       L+ 
Sbjct: 57  FFSSISSTFANIRN-RRRDREELLLFEAFFSIDLDNIENAQKLVKSLSEE--SDRLSLIK 113

Query: 124 L 124
           L
Sbjct: 114 L 114


>gi|42521029|ref|NP_966944.1| hypothetical protein WD1232 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410770|gb|AAS14878.1| hypothetical protein WD_1232 [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 233

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 14/229 (6%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++  +L ++W  AI  L +  K+      +     A+   A + +   KG+   +     
Sbjct: 8   IEHCILKEDWINAILRLKEAVKSNIFLPFDHKEMFAVFYCALAKQYESKGNFKEAIKSLF 67

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            + +        +   A+  I   K RKA  +LE  + VNP P+ A +Y +L S      
Sbjct: 68  RAQRYSAIFQPINYLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS------ 121

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            K A RL  +  +   S  +++  ++  G  D A      AMK A    I+ ++ Q+ + 
Sbjct: 122 -KGAERLYNLRPDCYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KV 179

Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417
                DK++YW       A+PDP W   +       W        +   
Sbjct: 180 TLQEHDKVIYWLNKMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 228


>gi|225677319|ref|ZP_03788296.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
 gi|225590646|gb|EEH11896.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
          Length = 406

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 14/229 (6%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++  +L ++W  AI  L +  K+      +     A+   A + +   KG+   +     
Sbjct: 181 IEHGILKEDWINAILRLKEAVKSNIFLPFDHKEMFAVFYCALAKQYESKGNFKEAIKSLF 240

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            + +        +   A+  I   K RKA  +LE  + VNP P+ A +Y +L S      
Sbjct: 241 RAQRYSAIFQPINYLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS------ 294

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            K A RL  +  +   S  +++  ++  G  D A      AMK A    I+ ++ Q+ + 
Sbjct: 295 -KGAERLYNLRPDYYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KV 352

Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417
                DK++YW       A+PDP W   +       W        +   
Sbjct: 353 TLQEHDKVIYWLNKMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 401



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           +I +       +   I V    E + +  GN       + I+      LF   LL  + R
Sbjct: 1   MIYFIIFAFSFLFG-IWVKVSGEVIKLELGNYTISIDLYFIIFTCVVLLF---LLITLVR 56

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
           FF S  +   ++ + R  D+    L+    SI   NI  A+K+   +S++       L+ 
Sbjct: 57  FFSSISSTFANIRN-RRRDREELLLFEAFFSIDLDNIENAQKLVKSLSEE--SDRLSLIK 113

Query: 124 L 124
           L
Sbjct: 114 L 114


>gi|88607729|ref|YP_505844.1| hypothetical protein APH_1339 [Anaplasma phagocytophilum HZ]
 gi|88598792|gb|ABD44262.1| conserved domain protein [Anaplasma phagocytophilum HZ]
          Length = 412

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 159/429 (37%), Gaps = 26/429 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+     F V+SL  C F +  +    + +         +   ++ +++     ++ +  
Sbjct: 1   MITYFLIFIVVSL-ACGFAVQGYEGLALKLEVLGYSVEAN---VVFVVFMLCVLFLFIVL 56

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R   +C   ++ +       K Y  +      ++  ++   RK+     +   F +  
Sbjct: 57  VGRACFACALCMYRVRRGSVSKK-YDEVGKSFAFLSVGHVDNVRKIVGISERFAKFDSPV 115

Query: 121 LVYLLEVQIALAERQYNIAHEKL-----EMMLQIPATR-EFAVYSLYFESCRIGDLNSAQ 174
           L  LLE   +    QY IA +       + + ++        +  L  E  R    +   
Sbjct: 116 L-QLLEGCASFRIGQYEIAEKHFSLIPSKALQEVDLGAWLVGI--LANEKSR----DCKL 168

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           R  ++  D+     W     ++   +  +W   +T L   +K       +   L +    
Sbjct: 169 RVLSRLYDVFHSRRWSVLFRLEIARMEGQWDEVLTALKLIEKYGVSHPYDLNDLELIARC 228

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           + A+   M   + + +  +K       A++  AK     N  ++A   LE  ++V+PHP+
Sbjct: 229 KLAELHYMQGDFKEGLGVIKGSSGLQ-ATLWRAKFNAKLNNVKRAMEELEAYYRVDPHPD 287

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A++Y  ++ +  +       +L  +N +S  S +++ +  +++   + A      A+  
Sbjct: 288 VASLYLSMVQDKNLA----VEKLNALNPDSYMSFLLMVRKYMDLKQYNAAEKHLKQALTQ 343

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYLSS-VWLPLSPIS 412
                ++ ++ +I      N D+I YW       ++PD  W  +    S   W       
Sbjct: 344 YKYAGLYGMMLEI-MVRLGNLDEIEYWIDMMRRDSVPDMHWACEKCCYSPKEWCQECDEC 402

Query: 413 KTLCYFEWK 421
           +     +W+
Sbjct: 403 EGFNTIKWR 411


>gi|111073632|emb|CAL29494.1| hypothetical protein OW2-H [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 420

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 14/229 (6%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++ Y+L ++W  AI  L +  K       +  +  A+   A + +  +KG+   +     
Sbjct: 195 IEGYILHEDWINAILKLKEAIKFNIFLPFDCEKMLAVFYCASAKQYENKGNYKKALRSLF 254

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           ++   C      +   A+  I   K RKA V+LE+ + VNP P+ A IY  L S      
Sbjct: 255 KAQSYCAAFQPINYLRAELYIKLGKIRKASVVLEEEYTVNPTPQSAKIYISLNS------ 308

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            K A +L  +  +   S  +++  ++ +   D A     +AM+ A    I+L++ Q++ A
Sbjct: 309 -KGAEKLYNLRSDYYFSYCLLALSSISLSKYDLASQHLDIAMRKANYVSIYLIMIQLKVA 367

Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417
                ++++YW       A+ DP W   D       W        +   
Sbjct: 368 -LQEYEQVIYWLNKMDSEAISDPYWKCADCNKKLKQWGYKCSSCNSFNC 415


>gi|56417190|ref|YP_154264.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries]
 gi|56388422|gb|AAV87009.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries]
          Length = 412

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/430 (14%), Positives = 135/430 (31%), Gaps = 30/430 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+  +    +++ +     I ++    + I     +   +   I+ +          L  
Sbjct: 1   MITYLL-ICIVASLAAGLAIQNYEELVLKIEIAGYVIEANTVFIVFMACALALLLAALLR 59

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +          +      R     Y++L  G   ++        ++ + V +        
Sbjct: 60  LCLACALLVYKIKCKSVARQ----YESLGRGYALLSLGGAMNHEQIVNTVEKLRALDRYS 115

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS--AQRY 176
           L  +LE        QY +A + L ++     P  R      L+      G+ +     R 
Sbjct: 116 LA-MLETCAWFRLGQYEMAEKPLLLLKGSGLPDARL----GLWLVESLNGERSKDCKLRV 170

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIAR 232
             +  D+   APW     ++   +  +W   +  +    K      +   R   I  +  
Sbjct: 171 LRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACLML 230

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     +GD          +  +      A+I  AK+       +KA   LE  +K  PH
Sbjct: 231 ARSCYQRGDYKEGLKLVGRATDMH-----AAILKAKTHEKLGNPQKARDALEACYKTTPH 285

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           PEI   Y  +  +          RL  +N +   S+++  K  +     + A   A  A+
Sbjct: 286 PEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQHAKRAI 341

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLSP 410
                 E++ L+A +     +  + + YW       ++P+  W       +   W     
Sbjct: 342 ARYKYVELYCLMADVMARIGNIDEVV-YWITKMQKDSVPNMQWRCTKCCSVLPEWSHECS 400

Query: 411 ISKTLCYFEW 420
                   +W
Sbjct: 401 ACNAFNSVQW 410


>gi|222475555|ref|YP_002563972.1| hypothetical protein AMF_890 [Anaplasma marginale str. Florida]
 gi|255004673|ref|ZP_05279474.1| hypothetical protein AmarV_05254 [Anaplasma marginale str.
           Virginia]
 gi|222419693|gb|ACM49716.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 412

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/430 (14%), Positives = 135/430 (31%), Gaps = 30/430 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+  +    +++ +     I ++    + I     +   +   I+ +          L  
Sbjct: 1   MITYLL-ICIVASLAAGLAIQNYEELVLKIEIAGYVIEANTVFIVFMACALALLLAALLR 59

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +          +      R     Y++L  G   ++        ++ + V +        
Sbjct: 60  LCLACALLVYKIKCKSVARQ----YESLGRGYALLSLGGAMNHEQIVNTVEKLRALDRYS 115

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS--AQRY 176
           L  +LE        QY +A + L ++     P  R      L+      G+ +     R 
Sbjct: 116 LA-MLETCAWFRLGQYEMAEKPLLLLKGSSLPDARL----GLWLVESLNGERSKDCKLRV 170

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIAR 232
             +  D+   APW     ++   +  +W   +  +    K      +   R   I  +  
Sbjct: 171 LRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACLML 230

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     +GD          +  +      A+I  AK+       +KA   LE  +K  PH
Sbjct: 231 ARSCYQRGDYKEGLKLVGRATDMH-----AAILKAKTHEKLGNPQKARDALEACYKTTPH 285

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           PEI   Y  +  +          RL  +N +   S+++  K  +     + A   A  A+
Sbjct: 286 PEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQHAKRAI 341

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLSP 410
                 E++ L+A +     +  + + YW       ++P+  W       +   W     
Sbjct: 342 ARYKYVELYCLMADVMARIGNIDEVV-YWITKMQKDSVPNMQWRCTKCCSVLPEWSHECS 400

Query: 411 ISKTLCYFEW 420
                   +W
Sbjct: 401 ACNAFNSVQW 410


>gi|269958417|ref|YP_003328204.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel]
 gi|269848246|gb|ACZ48890.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel]
          Length = 412

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 140/424 (33%), Gaps = 30/424 (7%)

Query: 9   FVISLVICSFIIVSHYPED---VSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFF 65
           F+I +V      ++    +     I     +   S     ++   F+   + L   +   
Sbjct: 5   FLICIVTSLAAGLAIQNYEELVFKIDIAGYVIEAS-----TVFVVFVACALALLLTALLR 59

Query: 66  LSCPAMLFHMLHKRNY-DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
           L     L     K     K Y++L  G   +++  +    ++   V +        L  +
Sbjct: 60  LCLTCALIAYKIKCRSVAKRYESLGRGYALLSSGGVMNHGQIVDTVEKLRGLDCYSLA-I 118

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           LE        QY +A + L  +     P  R            R  D     R   +  D
Sbjct: 119 LETCAWFRLGQYEMAEKPLLTLKNSCLPDGRLGLWLLELLNRERSKDCR--LRVLRRLCD 176

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIARSLENAD 238
           +    PW T   V+   +  +W  A+       +      +   R   +  +  +     
Sbjct: 177 VFRRVPWATMFKVEIARIEGDWDTALVETRLAARRGVVLPYKHERMGDVACLMLARACCQ 236

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +G+         +   +      A+I  A         RKA  +LE  +K  PHPE+   
Sbjct: 237 RGNYREGLKLVEKVTDMH-----ATILKATIHEKLGNLRKARDVLEVCYKTAPHPEVVTA 291

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y  +  +          RL  +N E   S+++  +  + +   + A   A  A+      
Sbjct: 292 YLAVSQDQDAA----MERLSSLNAEHYVSMLLAIRRYVSVKQYNAAEQYAKRALAKYKYV 347

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSA-LHAMPDPLWIS-DDGYLSSVWLPLSPISKTLC 416
           E++  + ++  A   N D++ YW +     ++P+  W   +   +SS W     +  T  
Sbjct: 348 ELYCAMMEV-MACIGNVDEVAYWLEKMRKDSLPNMQWRCTECCAVSSGWSHECSVCSTFD 406

Query: 417 YFEW 420
             +W
Sbjct: 407 SIQW 410


>gi|254995360|ref|ZP_05277550.1| hypothetical protein AmarM_05429 [Anaplasma marginale str.
           Mississippi]
          Length = 411

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 63/431 (14%), Positives = 135/431 (31%), Gaps = 33/431 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+  +    +++ +     I ++    + I     +   +   I+ +          L  
Sbjct: 1   MITYLL-ICIVASLAAGLAIQNYEELVLKIEIAGYVIEANTVFIVFMACALALLLAALLR 59

Query: 61  VSRFFLSCPAMLF-HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           +          +    + ++    G  AL      ++        ++ + V +       
Sbjct: 60  LCLACALLVYKIKCKSVARQYESLGRYAL------LSLGGAMNHEQIVNTVEKLRALDRY 113

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS--AQR 175
            L  +LE        QY +A + L ++     P  R      L+      G+ +     R
Sbjct: 114 SLA-MLETCAWFRLGQYEMAEKPLLLLKGSSLPDARL----GLWLVESLNGERSKDCKLR 168

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIA 231
              +  D+   APW     ++   +  +W   +  +    K      +   R   I  + 
Sbjct: 169 VLRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACLM 228

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +     +GD          +  +      A+I  AK+       +KA   LE  +K  P
Sbjct: 229 LARSCYQRGDYKEGLKLVGRATDMH-----AAILKAKTHEKLGNPQKARDALEACYKTTP 283

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           HPEI   Y  +  +          RL  +N +   S+++  K  +     + A   A  A
Sbjct: 284 HPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQHAKRA 339

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLS 409
           +      E++ L+A +     +  + + YW       ++P+  W       +   W    
Sbjct: 340 IARYKYVELYCLMADVMARIGNIDEVV-YWITKMQKDSVPNMQWRCTKCCSVLPEWSHEC 398

Query: 410 PISKTLCYFEW 420
                    +W
Sbjct: 399 SACNAFNSVQW 409


>gi|99034641|ref|ZP_01314590.1| hypothetical protein Wendoof_01000593 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 155

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
              A+  I   K RKA  +LE  + VNP P+ A +Y +L S       K A RL  +  +
Sbjct: 3   YLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPD 55

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
              S  +++  ++  G  D A      AMK A    I+ ++ Q+ +      DK++YW  
Sbjct: 56  YYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLN 114

Query: 384 S-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417
                A+PDP W   +       W        +   
Sbjct: 115 KMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 150


>gi|332304811|ref|YP_004432662.1| HemY domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172140|gb|AEE21394.1| HemY domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 393

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 132/386 (34%), Gaps = 20/386 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F  + + +    ++      V I +   +   + F +  +    +   +L   
Sbjct: 1   MIRILMVFVALLIAVLIGSLIFDDKGYVFIDFAGYVVEMNVFSMAIMTILVIVGLLLFSW 60

Query: 61  VSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           + +            L +   ++       A   GL+++A  +   ARK  + + Q+   
Sbjct: 61  LVKKLIMIISGSKNWLGNWGTRKKKR----AFTNGLIALAEQDYLEARKQLASIEQEDFD 116

Query: 117 HNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
                + LL    A  + +    A E   +    P +   A   L  +  +      A  
Sbjct: 117 G----LNLLAAAEAELQLQNPEGAQEYWRLATSYPKSAFAAKLCLVRDHLQNQQPMKALE 172

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----A 231
                 D       V     Q  V A +W      L   KK   E   +   L      A
Sbjct: 173 ILDDVNDKQKRQKSVLTLRAQALVQAGKWQELKDRLPSWKKALGEHYEHYMQLASSGNFA 232

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                     +  ++H   +S +       A +   K LI Q     AE  L +  K  P
Sbjct: 233 EIASKEGANQLKENWHALPKSTRRDPALQAAYV---KQLIDQGMHIDAEAALGEYHKNKP 289

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           HP +  +Y  L   +    LK+  +  +++  +VE L  +  +A     +  A      A
Sbjct: 290 HPMLLPLYKELRLSHPTTALKQLEQWLKVDDMNVELLSTLGTLAYHANDLSLAEKALSKA 349

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK 377
           +K+  R++  LLLA+I+++   +   
Sbjct: 350 IKLGNRQQDILLLAKIKESQQDDQQA 375


>gi|109896669|ref|YP_659924.1| HemY-like [Pseudoalteromonas atlantica T6c]
 gi|109698950|gb|ABG38870.1| HemY-like protein [Pseudoalteromonas atlantica T6c]
          Length = 393

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 130/386 (33%), Gaps = 20/386 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F  + + +    ++      V I +   +   + F +  +    +   +L   
Sbjct: 1   MIRILMVFVALLIAVLVGSLIFDDKGYVFIDFAGYVVEMNVFSMAIMTILVIVGLLLFSW 60

Query: 61  VSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           + +            L +   ++       A   GL+++A  N   ARK  + + Q+   
Sbjct: 61  LIKKLIMIISGSKNWLGNWGSRKKKR----AFTNGLIALAEQNFLEARKQLASIEQEDFD 116

Query: 117 HNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
                + LL    A  + +    A E   +    P +   A   L  +  +      A  
Sbjct: 117 G----LNLLAAAEAELQLQNPAGAQEYWRLATSYPKSAFAARLCLVRDHLQNQHPVKALD 172

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----A 231
              +  D       V     Q  V A +W      L   KK   E   +   L      A
Sbjct: 173 ILDELDDKQKRQRSVLTLRAQALVQAGKWQELKDRLPSWKKALGEHYEHYMQLASKGNFA 232

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                     +  ++H   +S +       A +   K LI Q     AE  L +  K  P
Sbjct: 233 EIASKEGANQLKENWHSLPKSTRRDPALQAAYV---KQLIDQGMHIDAEAALGEYHKNKP 289

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           HP +  +Y  L        LK+  +  + +  +VE L  +  +A        A      A
Sbjct: 290 HPMLLPLYKELKLSQPTTSLKQLEQWLKADDMNVELLSTLGAVAYNAKDFSLAEKALSKA 349

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK 377
           +K+  R++  LLLA+I+++   N   
Sbjct: 350 IKLGNRQQDILLLAKIKESQQDNQQA 375


>gi|148259145|ref|YP_001233272.1| HemY domain-containing protein [Acidiphilium cryptum JF-5]
 gi|326402298|ref|YP_004282379.1| hypothetical protein ACMV_01500 [Acidiphilium multivorum AIU301]
 gi|146400826|gb|ABQ29353.1| HemY domain protein [Acidiphilium cryptum JF-5]
 gi|325049159|dbj|BAJ79497.1| hypothetical protein ACMV_01500 [Acidiphilium multivorum AIU301]
          Length = 394

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 62/441 (14%), Positives = 136/441 (30%), Gaps = 59/441 (13%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR  R+  V   ++     ++     V++  G      S  V + +L   +   +L+  
Sbjct: 1   MLRAFRFALVAITLLGIAWFLAGLQGHVTVEIGTYAATASTPVAILLLVLLIVVVVLVLG 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  LS P  +     +   D    A    L ++AA +   A       + +       
Sbjct: 61  LLRGALSLPRRISVRRGRARRDAADSAALRALSALAAGDTEAAA--GHARTARRHAPEAP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATK 179
           L   +  + A        A      + +           L         D +   R A +
Sbjct: 119 LTLYVSAETARQAGDAAGAEALFSNLAKHGDAGFLGWRGLLTARPLPQDDPDRLARSAEQ 178

Query: 180 ALDIS---PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A   +   P++ W+ E  V+  +    +S A          A               + +
Sbjct: 179 ARQAAASYPNSAWLREQRVRIALGQGRFSEAARLATDPAARAA-----------LAIMAS 227

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +      +   A ++++L      A +   ++     +  +A+  L++ W++ PHP++A
Sbjct: 228 REVAGEPLAIDWARDAVRLAPGLPEAHLALFEARAKAGQAWRAKRALKRGWRIAPHPDLA 287

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + +   L+ + + +   A +L E+N    ES  ++++ A     + +A            
Sbjct: 288 DAWLAALT-SPLERATAAAKLAELNPGHPESEALLARTARAANLVGEAERH--------- 337

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTL 415
                      E+                       +W+          W P       +
Sbjct: 338 -----------ERHGGGKG-----------------VWVCATCDTEHEAWQPTCRKCGAI 369

Query: 416 CYFEW---KIPTKSPEYISSE 433
               W     P  +P  + + 
Sbjct: 370 GSLGWLRRTNPESTPRLLPAP 390


>gi|292493891|ref|YP_003529330.1| HemY domain protein [Nitrosococcus halophilus Nc4]
 gi|291582486|gb|ADE16943.1| HemY domain protein [Nitrosococcus halophilus Nc4]
          Length = 428

 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 138/396 (34%), Gaps = 15/396 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVS-HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M++ + +  ++ ++     +++      + + +G  +  T+  + + +         L  
Sbjct: 1   MMKAVIFGLIVLILAVGLELLTHDDSGYLVVGYGQWMVETTLTLAVIVAGLAFIGGYLAL 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
                    P  L     +R   +  K L  GL+ I   N   A +  + V      +  
Sbjct: 61  RFFSNMWRAPQRLGETRQRRRNSRASKMLIEGLIDIEEGNWDRAER--ALVKDIAHSNTP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L Y+   + A  +  Y    +    + +   PA       +        G  + A    
Sbjct: 119 LLNYIAAARAAQNQGAYER-RDHYLDLARETTPAANFAVELAQAELQISSGQFDQALATI 177

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
                + P  P   + +   Y   ++W + +  L + +K           L +   +E  
Sbjct: 178 RHLRALDPRHPQPLKLLKSLYSQHRDWGQLLGLLPELRKRRLVNKEESQSLEVMAHVELL 237

Query: 238 DKGDMIASYHDAIESLKLCDN------SIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +     S    IE+ K   N       I+A+   A  L+ +N+   AE +L++  K N 
Sbjct: 238 QEAARSESDAYLIEAWKAVPNRLRRHPRIVAAYVYA--LLERNELDLAEQLLQETLKRNW 295

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+  +Y  + S + V +L RA         +   L+ + ++A   G   +A      +
Sbjct: 296 SDELIYLYGLVRSSDLVAQLTRAEAWLSQQGNNPWLLLTLGRLAQYNGLWGKARQYLETS 355

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           +  APR E +  L ++ +    +++  L      L 
Sbjct: 356 IAYAPRPEAYRELGKVLE-EIGDSEAALECYSKGLS 390


>gi|330957340|gb|EGH57600.1| hemY protein [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 414

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 140/390 (35%), Gaps = 23/390 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           ++ +  +++  +     ++ +   V I + N  Y +S +  L++L   +    L+  V  
Sbjct: 6   VLLFIAIVAAALIGVA-IADHAGYVLIAYKNFRYESSLWATLALLLAVMLVIFLVRLVIT 64

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
              +   ++     +  + +   A+  G M +A      A++     ++     +  L Y
Sbjct: 65  LLTTSGGVVNPWSRRNRHRRVQMAIEQGQMDLAEGRWASAQRHLQRAAEADA--HPLLYY 122

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKA 180
           +   + A  + +Y      LE  L+     E A+      +      GD + A       
Sbjct: 123 IGAARAANEQGRYEDCDSLLERALERQPQAELAI--ALNHAQLQQDRGDTDGALITLQAM 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLI 230
               P  P V   + + Y    +WS  I  L + +K+     +  A          + L 
Sbjct: 181 QQRHPHNPQVLRQLQRLYQQRGDWSELIRLLPELRKDKVLPPKELAELERRAWGENLTLA 240

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKV 289
               ++      + S   A +SL          + A A  L     + +AE +L    K 
Sbjct: 241 GHRNDSEGTLTGLPSLEQAWQSLSAAQRQEPQLVLAYADQLRRLGAETQAEEVLRTALKR 300

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           + H  +A +Y  +   + + +L+ A    + +      L+ + +I L+     +A     
Sbjct: 301 DYHSHLARLYGLVRGSDPLKQLQAAEGWLKHHPSDPSLLLSLGRICLQGRLWGKARDYLE 360

Query: 350 LAMKI----APRKEIFLLLAQIEQANSHNT 375
            ++++        E+  LLAQ+ + +  N 
Sbjct: 361 SSLRLQRNPETCAELARLLAQMGETDRSNQ 390


>gi|270158069|ref|ZP_06186726.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella longbeachae D-4968]
 gi|289163666|ref|YP_003453804.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella longbeachae NSW150]
 gi|269990094|gb|EEZ96348.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella longbeachae D-4968]
 gi|288856839|emb|CBJ10650.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella longbeachae NSW150]
          Length = 394

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 134/382 (35%), Gaps = 41/382 (10%)

Query: 1   MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+R++  +  +++ VI   I ++  P  V I   +    T+ +V +  L        L  
Sbjct: 1   MIRVLFAFLILLAAVILG-IQLNKDPGYVLIAINHWTIETTVWVAIFTLILLFMIVYLFL 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHN 118
            + +     P+ L     ++ + K  +A+   GL+  +  N   A+  +  +        
Sbjct: 60  GICQKISLTPSKLTRWHARKRFRKA-QAITRKGLIEYSEGNWVKAK--NHLIQGLPNSDT 116

Query: 119 EYLVYLLEVQIALAERQY----NIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLN 171
             L YL   + A          +   E  + M +     E        ++          
Sbjct: 117 PLLNYLTAARAAQKMGDNQLRDDYLREAQQSMPEAKIAVEL------TQAELQLSNHQWE 170

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAI 227
            A         I+P  P+V   +++ Y   ++W + IT L      K  N +E+ + +  
Sbjct: 171 QALATLKHLHTIAPRHPYVLMLMMRLYQEIRDWPQLITLLPDLKKYKVINQQEFEQIQYD 230

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--------AAKSLISQNKKRKA 279
             + R  + A +            ++     SI  +I           + L+  N+   A
Sbjct: 231 TYLQRLRDLAKQNQSS--------AVNSFFQSIPKTIVNNPEVIAEYTRFLLKNNEFTTA 282

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           + ++ +  + + +P +  +Y  L ++     L  A  L +    S    + + ++ +++ 
Sbjct: 283 KNLVYRTLRKDFNPRLIELYAMLPADEHQ--LTFAESLLKKKPHSAALYLCLGQLCIKLQ 340

Query: 340 SIDQAHAKAMLAMKIAPRKEIF 361
              +A      + +I P    +
Sbjct: 341 LWGKAKYYLEKSNEIEPTPLAY 362


>gi|237801595|ref|ZP_04590056.1| hemY protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331024455|gb|EGI04511.1| hemY protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 414

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/392 (16%), Positives = 137/392 (34%), Gaps = 29/392 (7%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           ++ +  +++  +     V+ +   V I + N  Y +S +  L++L   L     +  V  
Sbjct: 6   VLLFIAIVAAALIGVA-VAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAAIRLVIT 64

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
              +   ++     +    +   A+  G M +A      A++     ++     +  L Y
Sbjct: 65  LLTTSGGVVNPWSRRNRSRRVQLAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HPLLYY 122

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKA 180
           +   + A  + +Y      LE  L+     E A+      +      GD + A       
Sbjct: 123 IGAARAANEQGRYEDCDALLERALERQPQAELAI--ALNHAQLQQDRGDTDGALTTLQAM 180

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLI 230
               P  P V   + + Y    EWS  I  + + +K+     +  A          + L 
Sbjct: 181 HQRHPHNPQVLRQLQRLYQQRGEWSDLIRLMPELRKDKVLPPKELAELERRAWGENLTLA 240

Query: 231 ARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           A   +       + S   A +    + +     + A    A  L     + +AE +L   
Sbjct: 241 AYRDDTDGALTGLPSLEKAWQGLSAAQRQEPQLVQA---YADQLRRLGAEAQAEEVLRVA 297

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            K   H  +A +Y  +   + + +L+ A    + +      L+ + +I L+     +A  
Sbjct: 298 LKREYHSPLARLYGLVRGGDPLKQLQVAEGWLKHHPADPSLLLSLGRICLQGRLWGKARD 357

Query: 347 KAMLAMKI----APRKEIFLLLAQIEQANSHN 374
               ++++        E+  LLAQ+ + +  N
Sbjct: 358 YLESSLRLERNPETCAELARLLAQLGETDRSN 389


>gi|70733283|ref|YP_263057.1| hemY protein [Pseudomonas fluorescens Pf-5]
 gi|68347582|gb|AAY95188.1| hemY protein [Pseudomonas fluorescens Pf-5]
          Length = 412

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 128/385 (33%), Gaps = 16/385 (4%)

Query: 5   IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRF 64
           +    VI+ +    + ++ +P  V I + N  Y +S +  L+++         +  +   
Sbjct: 6   VIVLLVIAAIGLLGLAIAEHPGYVLIAYSNFRYESSLWATLALVALVWLVVWGIKLLIEL 65

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
            +    ++     +    +   A+  G M +A      A+K     +         L YL
Sbjct: 66  VMVSGGVVNPWSRRNRSRRVQIAIEQGQMDLAEGRWASAQKHLQRAA--EAERQPLLYYL 123

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDI 183
              + A  +  Y      LE  L      E AV   + +     GD   A        + 
Sbjct: 124 GAARAANEQGHYEECDRLLERALTRQPQAELAVALSHAQLQTDRGDTEGALSTLQAMHER 183

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--------NRNRAILLIARSLE 235
            P +  V   + + +    +WS  I  L + +K+             R     L   +  
Sbjct: 184 HPHSVQVLRQLQRLHQQRGDWSALIRLLPELRKDKALPASELQELERRAWGENLSLAARR 243

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPE 294
             D+   + S + A + L          + A A+ L       +AE  L    K      
Sbjct: 244 EEDEVAGLQSLNRAWQQLTSAQRQEPQLVLAYAEQLRQLGAGAEAEEALRTAIKRKYESH 303

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A +Y  +   +   +L+ A    + + +    L+ + ++ L+     +A      ++++
Sbjct: 304 LARLYGLVRGSDPSRQLQTAEHWLKEHADDPSLLLTLGRLCLQNSLWGKARDYLESSLRL 363

Query: 355 ----APRKEIFLLLAQIEQANSHNT 375
                   E+  LLAQ+      N 
Sbjct: 364 QRNPEACAELARLLAQLGDTERSNQ 388


>gi|294787826|ref|ZP_06753070.1| HemY family protein [Simonsiella muelleri ATCC 29453]
 gi|294484119|gb|EFG31802.1| HemY family protein [Simonsiella muelleri ATCC 29453]
          Length = 397

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 123/384 (32%), Gaps = 27/384 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  LI    + ++ + + +++ H+P DV    GN + R +  + +  L   +     L  
Sbjct: 1   MKGLIWIIVLFAIAVGAALLIQHFPGDVYAHVGNYMLRMNLRLFIIGLLLSMVVLYFLIK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-QHTFHNE 119
                L+ P  +      R   K   AL    ++        A +  + V    H  +N 
Sbjct: 61  FVFGILATPGKMSRFGSSRKSRKAIAALNDAGVAYFEGRYQKAEQEAAKVLANNHAGNNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYA 177
            L  ++  Q +            L  M Q+   +      L     +    D  +A+   
Sbjct: 121 VLALMIAAQSSQKIGNLTKRDSYLRDMEQVLPAKAQLPRYLLLAESAMLRQDYVTAEENL 180

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLE 235
           + A  +  + P + +  ++  +        +  L    K + A + +    +     +  
Sbjct: 181 SAAAQLDRNLPELLQMQLRLAIAK---DNPLEILESVDKLQKASQLSNEEVLNYRNVAYR 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVN-- 290
           +       AS   A  +L+   + + +    +  A         + A       W  +  
Sbjct: 238 SLVANAANASQLKA--ALRRIPDEVKSGELCVSIATQYQHLGLYQDAT-----AWVRSYY 290

Query: 291 PH-------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           PH       P  AN   +L        +  A    +   +  E L+ + ++ +      +
Sbjct: 291 PHTHYVDLLPIFANSMRYLNDSEQRKSIDIADGWLKSQPKDAELLICLGELCINKQLWGK 350

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQI 367
           A      ++ I P     L LA++
Sbjct: 351 AQGYLEASVAIKPTTRARLALAKV 374


>gi|254490246|ref|ZP_05103436.1| HemY N-terminal domain protein [Methylophaga thiooxidans DMS010]
 gi|224464593|gb|EEF80852.1| HemY N-terminal domain protein [Methylophaga thiooxydans DMS010]
          Length = 399

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 141/385 (36%), Gaps = 12/385 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++++    +  ++  +FI  +   P    + +GN    TS  V+ +   F L A  LL  
Sbjct: 1   MKVLIIVALALVLGAAFIWAADFEPGFALLQYGNWSLETSLVVLSTAFIFLLVAGYLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                   P  L      + + +  +AL  GL+++       A ++   +   +      
Sbjct: 61  SVVLVKQSPKRLSAWKQNQRHKRASQALTRGLITLEEGRWAEAERV--LLRHANNSETPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYAT 178
           L YL   + A  +   +     L +  +     + AV  +     +   G    A     
Sbjct: 119 LHYLAAARAAQKQHAPDRRDNYLRLAHETTDGADIAV-GVVQAELQLSAGQKEQALATLQ 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAI----LLIARS 233
              +++P  P+V + +   Y    +W    + L + +K++  E    RA+     +    
Sbjct: 178 HLREVAPKHPYVLQLLQTLYQDMDQWQEVQSVLPDLRKRHVLETAEVRALDQEAAVGQLE 237

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L  + +     +        ++     M     A  LI Q ++ +A  ++E+  + N   
Sbjct: 238 LALSRQEWSKMARVWEKSPARMRQTEAMLRPYVA-GLIKQGEQEQAIELIEQFLRKNWSD 296

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++   Y  +   + + +L  A +  +  K++   L+ + ++A       +A      +++
Sbjct: 297 QLVYQYGQIAQGDLLKRLAIAEKWLKDKKDNPWLLLTLGRLAKASELWKKAEEYLHASLE 356

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKI 378
              R E +  LA+++ A   +    
Sbjct: 357 QGARGETYQALAEVQLAEGRHDAAA 381


>gi|77461705|ref|YP_351212.1| HemY-like [Pseudomonas fluorescens Pf0-1]
 gi|77385708|gb|ABA77221.1| putative HemY domain protein [Pseudomonas fluorescens Pf0-1]
          Length = 412

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 133/379 (35%), Gaps = 15/379 (3%)

Query: 1   MLRLIRYFF-VISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M RL    F VI+      + ++ +   V + + +  Y +S +  L+++         + 
Sbjct: 1   MKRLYVIVFLVIAATAALGLAIAEHSGYVLVAYKSFRYESSLWATLAVVAVLWLLVWGIK 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHN 118
           A+    L+   ++     +    +   A+  G + +A      A++ ++     +     
Sbjct: 61  ALVELVLTSGGVVNPWSRRNRSRRVQVAIEHGQLDLAEGRWASAQRHLYRAAEAER---Q 117

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYA 177
             L YL   + A  +  Y  +   LE  L+     E A+   + +     GD + A    
Sbjct: 118 PLLYYLGAARAANEQGNYEESDRLLERALERQPQAELAIALSHAQLQTDRGDTDGALVTL 177

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--------KEWNRNRAILL 229
               +  P        + + +    +WS  I  L + +K+         +   R     L
Sbjct: 178 QAMHERHPHNVQTLRQLQRLHQQRGDWSSVIRLLPELRKDKVLPPAELTELERRAWGENL 237

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288
              +    D    + S + A + L        A + A A+ L     + +AE +L    K
Sbjct: 238 SLAAHREEDGAVGLQSLNRAWQQLTSAQRQEPALVLAYAEQLRQLGAQVEAEEVLRTALK 297

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +A +Y  +   +   +L+ A    + +      L+ + ++ L+     +A    
Sbjct: 298 RKYDSHLARLYGLVRGSDPARQLQTAEGWLKDHPGDASLLLTLGRLCLQASLWGKARDYL 357

Query: 349 MLAMKIAPRKEIFLLLAQI 367
             ++++    E    LA++
Sbjct: 358 ESSLRVQRNPEACAELARL 376


>gi|261856744|ref|YP_003264027.1| HemY domain protein [Halothiobacillus neapolitanus c2]
 gi|261837213|gb|ACX96980.1| HemY domain protein [Halothiobacillus neapolitanus c2]
          Length = 400

 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 126/395 (31%), Gaps = 16/395 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R +    ++ L   +       P    I       +TS   +L+++        +++ 
Sbjct: 1   MKRFVLILIILVLAAGAGFYFIRDPGTADIALLGWDLQTSALGLLALIIVGFIVLAIIWR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V    L  P++      ++      + +      +      +A K+      + +     
Sbjct: 61  VISAVLKLPSLWRRRSARQKQQAADEQVLRAWAELERGRFSVAEKLARTRLNEASL--PP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L Y++     +A+ +       L+ +    P   +F    +     +  +L  A      
Sbjct: 119 LNYVIAADALMAQDETAATLSLLDEVRASFPRFADFLSLHIANRFRQQKNLAPALELLQS 178

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSR------AITFLNQKKKNAKEWNRNRAILLIARS 233
                P    +  A  +    A +W +      A+  L       ++  R    +     
Sbjct: 179 LAAAHPKDEAIVCAFAETLFEAADWEKLRTLMPALRRLKWSGLTEQDVQRYDRAVYGGLI 238

Query: 234 LENADKGDMIASYHDAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            E A             ++ K    D+ ++AS+  A S ++  +  +AE ILE       
Sbjct: 239 QEAARHKQTAELAAIWNDAPKSLRQDDLMLASL--ANSWLTLGQPAEAERILETAQDQQC 296

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV---SKIALEMGSIDQAHAKA 348
            P + + +  L   +    + R       +    +  ++    +++A      + A    
Sbjct: 297 TPALLHHWLALPPADPARAIARFNHWAGQSTCQPDKKLLAYANARLAWLNDDTEGAKQAL 356

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
              +   P      L AQI +    +T  ++Y+T+
Sbjct: 357 APVLGDHPDIPSLKLAAQIAEHERDSTQAVMYYTK 391


>gi|330827975|ref|YP_004390927.1| HemY protein [Aeromonas veronii B565]
 gi|328803111|gb|AEB48310.1| HemY protein [Aeromonas veronii B565]
          Length = 387

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 122/376 (32%), Gaps = 21/376 (5%)

Query: 1   MLRLIRYFFV-ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+R+I    V ++ +I      S     V I  GN    +S    + +   F  A +++ 
Sbjct: 1   MIRIIILVAVMVAGLIFG-PQASGNKGYVLIALGNYTIESSVTSAVILAVLFYGALLIVE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +                 R   K  +      +++A  +   A K+    +        
Sbjct: 60  WLLGRVFGLRRKTLGWYGSRRRRKANQQTVAATLAMAEGHYSQAEKLMIKGASN--SDTP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            L YL   + A A        + L +   + P        +        G  ++A     
Sbjct: 118 LLNYLSAAKAAQARGDDARRDQYLQKAQEENPKAELALTLTQTQLQIEQGQYDTALAMLE 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL-------IA 231
               ++P  P V + + Q ++  ++WS     +    K  K   +    LL       + 
Sbjct: 178 SVYALNPRHPMVLDQLRQVHLARQDWSALCDLIPALHKVGKLTPKQEEDLLQQAWCGRLQ 237

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++  + +    +  + D    L+L    +    C    L       +A  + ++  +  P
Sbjct: 238 QAAGSLETLKAV--WQDLPRKLRLEPELL---ACYGDLLRQLGADSEAATLWQEALRKQP 292

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            P++      L  ++    L     L +  +   +    ++++ L  G +D A       
Sbjct: 293 MPQLLARLPKLKLDSYQPLL----ALLQKQQGQPDVDTALAQLYLLAGQLDDAQKLLEQE 348

Query: 352 MKIAPRKEIFLLLAQI 367
           ++ AP    +  L Q+
Sbjct: 349 VERAPSAAAYHALGQL 364


>gi|322834937|ref|YP_004214964.1| HemY protein [Rahnella sp. Y9602]
 gi|321170138|gb|ADW75837.1| HemY protein [Rahnella sp. Y9602]
          Length = 398

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 124/390 (31%), Gaps = 21/390 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLR+   F ++   I    I++ +   V I   N    TS   ++ +L   +    L+  
Sbjct: 1   MLRVFVLFLIVFAGIIVGPILAGHQGYVLIQTDNYNIETSVTGLVIMLIVLIVVLFLIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  L   A        R   K  K  +  ++ +A  +     K+ +  +         
Sbjct: 61  ILRRVLRTGARTRGWFAGRKSSKARKQTHAAMLKLAEGDHRQMEKLLARNADHA--EQPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172
           + YLL  + A         ++ LE   +        +  TR              G++++
Sbjct: 119 VNYLLAAEAAQQRGDDIRTNQYLERAAEIADIDQMPVDITRV-------RIQLARGEVHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---- 228
           A+    + L  SP  P V     Q Y+L   +   +  L    K     +    +L    
Sbjct: 172 ARHGVDRLLGQSPRHPEVLRLAEQAYLLTGAYGSLLEILPSMAKADIHTDDEIRVLQEQA 231

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I    +   +           +  +   + +   +  A  LI  N +  A+ ++    K
Sbjct: 232 YIGMMNQLMAEEGSEGLKRWWKDQSRKTRHEVALQVAMATHLIECNDQDLAQEVILDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +  +   L S N     K   +L + N  +      + ++ ++ G   QA    
Sbjct: 292 RQYDDRLVALMPKLRSGNPEQLEKTLRQLIKQNGTTPLLSSTLGQLLMKHGEWQQASEAF 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             A+K  P    +  LA          +  
Sbjct: 352 REALKQRPDAYDYAWLADALDKLHKPAEAA 381


>gi|295095184|emb|CBK84274.1| hemY protein [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 400

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 58/391 (14%), Positives = 115/391 (29%), Gaps = 23/391 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML++   F ++   I    +++ +   V I   N    TS   ++ IL   +   + +  
Sbjct: 2   MLKVFLLFILLIAGIVLGPMLAGHQGYVLIQTDNYNIETSVTGLVIILILGVVVLLAVEW 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119
           + R               R   +  K     L+ +A  +     K M             
Sbjct: 62  LLRRIFRTGVHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMSKNADH---AEQP 118

Query: 120 YLVYLLEVQIALAERQYNIA----HEKLEMMLQIP----ATREFAVYSLYFESCRIGDLN 171
            + YLL  + A        A        E+  + P     TR               + +
Sbjct: 119 VVNYLLAAEAAQQRGDEARANQHLERASELSTKDPIPVEITRV-------RLQLARNENH 171

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNRNRAILL 229
           +A+    + L+I+P  P V     Q Y+    W   +  +    K     + +R+    L
Sbjct: 172 AARHGVDRLLEITPRHPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDELQRL 231

Query: 230 IARSLENADKGD--MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               L +  + D              +     +   +  A+ LI  +    A+ IL    
Sbjct: 232 AWIGLMDQARADLGSDGLKTWWKNQSRKTRQQVPLQVAMAEHLIECDDHDTAQEILLDGL 291

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           K      +  +   L + N     K   +  +   +       + +  ++ G   +A   
Sbjct: 292 KRQYDDRLVMVIPRLKTNNPEQIEKALRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLA 351

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
              A+K  P    +  LA          +  
Sbjct: 352 FRAALKQRPDAFDYAWLADSLDKQHKPEEAA 382


>gi|312963801|ref|ZP_07778272.1| HemY-like protein [Pseudomonas fluorescens WH6]
 gi|311281836|gb|EFQ60446.1| HemY-like protein [Pseudomonas fluorescens WH6]
          Length = 413

 Score = 97.3 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 139/396 (35%), Gaps = 28/396 (7%)

Query: 1   MLRLIRYFFVISLVICS-FIIVSHYPEDVSITWGNR-LYRTSPFVILSILYFFLFAWILL 58
           M R      ++  +  +  + +S +   V IT+ +   Y +S +  L  ++    A  ++
Sbjct: 1   MKRFYMILVLVIAIALALAVGISKHTGYVLITYPHVLHYESSLWATLVAVFAIGLAIYVI 60

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFH 117
             +     +   ++     +    +   A+  G M +A      A + +H     +    
Sbjct: 61  RLLLSLVTTSGGVVNPWSRRNRSRRVQIAIEQGQMDLAEGRWASAERHLHRAAEAER--- 117

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176
              L YL   + A  + +Y  +   LE  L+     E AV   + +     GD + A   
Sbjct: 118 QPLLYYLGAARAANEQGRYEESDGLLERALERQPQAELAVALSHAQLQLDRGDTDGALVT 177

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILL 229
                +  P    V   + + +    +WS  I  L + +K+         E  R      
Sbjct: 178 LQAMHERHPHNAQVLRQLQRLHQQRGDWSSVIRLLPELRKDKVLPAGELAELERRAWGEN 237

Query: 230 IARSLENADKGDM-----IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-IL 283
           ++ + +  ++G+        ++     + +     ++A     + L +  K  +A    L
Sbjct: 238 LSLAAQREEQGEAGLQSLERAWQQLTSAQRQEPQLVLAYAEQLRQLGADAKAEEALRGAL 297

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           ++ +  +    +  +Y  L   +   +LK A    + +      L+ + ++ L+     +
Sbjct: 298 KRSYDSH----LIRLYGLLRGSDPTRQLKFAEGWLKDHPGDASLLLTLGRLCLQNSLWGK 353

Query: 344 AHAKAMLAMKI----APRKEIFLLLAQIEQANSHNT 375
           A      ++++        E+  LLAQ+      N 
Sbjct: 354 ARDYLESSLQVQRNPEACAELARLLAQLGDTERSNQ 389


>gi|37678262|ref|NP_932871.1| uncharacterized enzyme of heme biosynthesis [Vibrio vulnificus
           YJ016]
 gi|37197001|dbj|BAC92842.1| uncharacterized enzyme of heme biosynthesis [Vibrio vulnificus
           YJ016]
          Length = 393

 Score = 96.5 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 19/397 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N     S   ++  +   L     L  
Sbjct: 1   MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFIVAALAGLFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LVKKVLYTGFTTWNWFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWASHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       +    +         AV    S   +  R G+   A    
Sbjct: 119 LCYLVASEAADGQGDKAK-RDHYLALAAEQENAYLAVELTRS--KQLVREGEFAQAFDSL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARS 233
                  P+ P V   +   Y+  K W   I  L     Q   + ++  +          
Sbjct: 176 QSLKGRYPNNPIVLNLLKTTYLELKLWQPLIDLLPTLNKQALISPEDAEQMHQRAQCGLL 235

Query: 234 LENADKGDMIASYHDAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            + A +                +K   + +    C AK LI++    +A  ++++  K +
Sbjct: 236 ADVAGQQGSEGLIKHWNTLPRKVKQDPHLV---ACFAKQLIARKADHEALTVIKEALKKS 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P PE+  +   L   +    +    +  + +  + E+   ++++    G   QA +    
Sbjct: 293 PSPELYALLPQLNLSDVHPVIVMLEQNVKNDNHNAEAHSALAQLYFREGKWPQAQSHFET 352

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           A+K+      +  LA   +  + N       ++ AL 
Sbjct: 353 ALKVRSSVSDYAFLADALEKQNLNKA-AHEVSRKALT 388


>gi|320154941|ref|YP_004187320.1| HemY-like protein [Vibrio vulnificus MO6-24/O]
 gi|319930253|gb|ADV85117.1| HemY-like protein [Vibrio vulnificus MO6-24/O]
          Length = 393

 Score = 96.5 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 19/397 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N     S   ++  +   L     L  
Sbjct: 1   MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFIVAALAGLFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LVKKVLYTGFTTWNWFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWASHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       +    +         AV    S   +  R G+   A    
Sbjct: 119 LCYLVASEAADGQGDRAK-RDHYLALAAEQENAYLAVELTRS--KQLVREGEFALAFDSL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARS 233
                  P+ P V   +   Y+  K W   I  L     Q   + ++  +          
Sbjct: 176 QSLKGRYPNNPIVLNLLKTTYLELKLWQPLIDLLPTLNKQALISPEDAEQMHQRAQCGLL 235

Query: 234 LENADKGDMIASYHDAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            + A +                +K   + +    C AK LI++    +A  ++++  K +
Sbjct: 236 ADVAGQQGSEGLIKHWNTLPRKVKQNPHLV---ACFAKQLIARKADHEALTVIKEALKKS 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P PE+  +   L   +    +    +  + +  + E+   ++++    G   QA +    
Sbjct: 293 PSPELYALLPQLNLSDVHPVIVMLEQNVKNDNHNAEAHSALAQLYFREGKWPQAQSHFET 352

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           A+K+      +  LA   +  + N       ++ AL 
Sbjct: 353 ALKVRSSVSDYAFLADALEKQNLNKA-AHEVSRKALT 388


>gi|78484460|ref|YP_390385.1| HemY-like [Thiomicrospira crunogena XCL-2]
 gi|78362746|gb|ABB40711.1| HemY-like [Thiomicrospira crunogena XCL-2]
          Length = 391

 Score = 96.5 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 130/388 (33%), Gaps = 21/388 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M +++++ F + +      +  +    VS+ W + +  TS    L+ +     +  LL  
Sbjct: 1   MSKILKWSFFLLIATGLTSLALYDNGQVSMVWNDWVIETSLSFALAAVVVIFGSVYLLMR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA   +    + Y+K   ++  GL+++   +  +A K    +++Q    +  
Sbjct: 61  LLISVWHFPAYWRNRQQLKRYNKAETSISKGLIALEYGDWQMAEKHLIKMAKQ---SDAG 117

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFES-CRIGDLNSAQRY 176
           L++ L    A        A  + E  L     R    Y    L           + A   
Sbjct: 118 LIHYLTA--AKMAHN-QGALTRREQYLNEARKRFPQDYVTIGLVESRLLANEQPDMALVI 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +    +P    +    VQ     K+W      L Q KK           L I      
Sbjct: 175 LAELHQQNPKNRPILSEYVQLLEQQKQWQTLEGLLGQIKKIRAMDKAALQALEIRLIAGK 234

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK---AEVILE---KIWKVN 290
             K + +       +SL      + A I A          ++   AE+I++   K W   
Sbjct: 235 VAKAENLDVLDTLWKSLSAKQQLMPA-ILAEFVEQRMGWGKEQGLAELIVKSVSKQWDDR 293

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               +   Y  +       +LKRA +  +   ++   L+ + ++A       QA      
Sbjct: 294 ----LVYQYGRIELGPAFERLKRAEKWLKGQDDNPVLLLTLGRLACMSQLWGQAKHYFQQ 349

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           ++ + P  E F  LA+  +A    T   
Sbjct: 350 SLTLQPELETFHALAKCYEAEGLETQAA 377


>gi|27364540|ref|NP_760068.1| HemY-like protein [Vibrio vulnificus CMCP6]
 gi|27360659|gb|AAO09595.1| HemY-like protein [Vibrio vulnificus CMCP6]
          Length = 393

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 19/397 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N     S   ++  +   L     L  
Sbjct: 1   MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFIVAALAGLFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LVKKVLYTGFTTWNWFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       +    +         AV    S   +  R G+   A    
Sbjct: 119 LCYLVASEAADGQGDKAK-RDHYLALAAEQENAYLAVELTRS--KQLVREGEFALAFDSL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARS 233
                  P+ P V   +   Y+  K W   I  L     Q   + ++  +          
Sbjct: 176 QSLKGRYPNNPIVLNLLKTTYLELKLWQPLIDLLPTLNKQALISPEDAEQMHQRAQCGLL 235

Query: 234 LENADKGDMIASYHDAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            + A +                +K   + +    C AK LI++    +A  ++++  K +
Sbjct: 236 ADVAGQQGSEGLIKHWNTLPRKVKQDPHLV---ACFAKQLIARKADHEALTVIKEALKKS 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P PE+  +   L   +    +    +  + +  + E+   ++++    G   QA +    
Sbjct: 293 PSPELYALLPQLNLSDVHPVIVMLEQNVKNDNHNAEAHSALAQLYFREGKWPQAQSHFET 352

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           A+K+      +  LA   +  + N       ++ AL 
Sbjct: 353 ALKVRSSVSDYAFLADALEKQNLNKA-AHEVSRKALT 388


>gi|254508815|ref|ZP_05120926.1| HemY protein [Vibrio parahaemolyticus 16]
 gi|219548272|gb|EED25286.1| HemY protein [Vibrio parahaemolyticus 16]
          Length = 392

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 130/382 (34%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R+I  F ++   + +    +     V I+  N+    S   ++  +   L     L  
Sbjct: 1   MFRIIFLFVILGAGLFAGTQYAGQQGYVLISIANKTIEMSVTTLVIFIIAALATLFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             +  LS  +  ++    R   +  +    G++ +   +  LA K  +  +  H      
Sbjct: 61  FIKKALSASSATWNWFSVRKMRRSRRYTNEGIIKLLEGDFKLAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A    + +   ++   +         AV        +  R  D  +A    
Sbjct: 119 LCYLVASEAAQGMGESDK-RDRYLELASQQENSLLAVELTR--AKQQVRESDFTAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------LI 230
           T      P    V   +   Y+  K W   +  L    K        +A L       L+
Sbjct: 176 TTLKASYPTNTIVLNLLKSVYIELKLWQPLLDALPNLVKAKIISKDEQAQLTQRAQCGLL 235

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A   E      +++ +++    LK   + +    C AK LIS+    +A  ++++  K +
Sbjct: 236 AEVAEQKGSEGLVSHWNNLPRKLKSDSHLVE---CFAKQLISRKADNEAFTLIKENIKKH 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P+  +  +   +   ++   +     +   +  + E+   +++  L      +A      
Sbjct: 293 PNSSLYALLPEMNLADSHPAIVFLETVLNKDGNNAEAHSALAQFHLRNEKWSEAQQHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ + P    +  LA   +  +
Sbjct: 353 ALSLRPNVSDYAYLADALEKQN 374


>gi|300115113|ref|YP_003761688.1| HemY domain-containing protein [Nitrosococcus watsonii C-113]
 gi|299541050|gb|ADJ29367.1| HemY domain protein [Nitrosococcus watsonii C-113]
          Length = 430

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 61/396 (15%), Positives = 138/396 (34%), Gaps = 17/396 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVS-HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++ + +  ++ ++     +++      + I +G  +  T+  + + +L        L   
Sbjct: 1   MKAVIFGLIVLILAAGLELLTHDDSGYLVIGYGQWMIETTLTLAVIVLGLAFIGGYLALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                   P  L     +R   +  K L  GL+ I   N   A +  + V      +   
Sbjct: 61  FISHIGKTPRRLGKTRQRRRSSRASKMLIEGLIDIEEGNWDRAER--ALVKDIAYSNTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYAT 178
           L Y+   + A  +  Y    +    + +   PA       +        G    A     
Sbjct: 119 LNYIAAARSAQNQGAYER-RDHYLRLAREAVPAATFAVELTQAELQVNSGQFEQALAILN 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAIL---LIA 231
               + P        +   Y+  ++W++ +  L     ++  N +E +    +    L+ 
Sbjct: 178 HLRTLDPRHSQPLRLLKSLYLQQRDWNQLLGLLPQLCKRRLVNKEEAHSLEVMAHVELLQ 237

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            + +N     +I  +       +     + A + A   LI +N++  AE +L+   K N 
Sbjct: 238 EAAQNESDAALIDRWKAVPNRFRKHPKIVAAYVYA---LIDRNEQDLAEQLLQDTLKGNW 294

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+  +Y  + S + V +L RA         +   L+ + ++A   G   +A      +
Sbjct: 295 SDELIYLYGLVQSSDLVAQLARAEAWLSQQGNNPWLLLTLGRLAQHNGLWGKARQYLETS 354

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           +  APR E +  L ++ +    +++  L      L 
Sbjct: 355 IAYAPRSEAYRELGKVLE-EIGDSEAALECYSKGLS 389


>gi|121997819|ref|YP_001002606.1| HemY domain-containing protein [Halorhodospira halophila SL1]
 gi|121589224|gb|ABM61804.1| HemY domain protein [Halorhodospira halophila SL1]
          Length = 441

 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 126/388 (32%), Gaps = 17/388 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL  Y  +++  + + +  +     V ++ G      S      +L   +    L  A
Sbjct: 1   MRRLFIYLLILAGAVLTALYFNQQEGYVMLSIGPWRLEMSLLFSAVVLGLLVLLLYLALA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                 S P  L     +R  +     L +GL+  A  +   A +   + +++       
Sbjct: 61  ALGRLWSMPRRLRSWQGQRRQESARTELTSGLLRFAEGDYDTAEQQLVHSARR---SEAP 117

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRI-GDLNSAQRYAT 178
           LV  L   IA   R      +      +        AV  L  +     G    AQ   +
Sbjct: 118 LVNYLTAAIAAQRRGAREVRDGYLTTAEKSGPDANLAVRLLQAQLQAESGQWEEAQASVS 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
             LD  P      E +V       +W R    L + ++           L    + E   
Sbjct: 178 AVLDKEPKHRRALELMVGCCRALGDWERLEPLLPRIERQGILPKNELTELNRWVARERLA 237

Query: 239 KG---DMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +    D  A      E    L+   + I + +     L +  + + A  +++K      +
Sbjct: 238 QAAGEDTQALQEAWRELSRGLRKDPDVICSYV---DGLTTLGEVQSAVELIQKQLHKEWN 294

Query: 293 PEIANIYTHLLSENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           P++   Y  L +++      +L++A    E +++  ++L     +AL+    ++      
Sbjct: 295 PDLLQRYARLPADDIDTYAARLEKAEGWIEAHRDDPKALYAAGVLALQAEQWERGRDYLQ 354

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            A+    R E    L  +++        
Sbjct: 355 AAVDQTARPEYLRTLGALQEHLGDYDGA 382


>gi|226326703|ref|ZP_03802221.1| hypothetical protein PROPEN_00556 [Proteus penneri ATCC 35198]
 gi|225204924|gb|EEG87278.1| hypothetical protein PROPEN_00556 [Proteus penneri ATCC 35198]
          Length = 388

 Score = 94.2 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 131/379 (34%), Gaps = 23/379 (6%)

Query: 1   MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ML+++  +  +I+ +I    +++ +   V I   +    TS   ++ +      A +L+ 
Sbjct: 1   MLKILLLFVVLIAGIIFG-PLLAGHQGYVLIQTDDWDIETSVTSLVIMFVLLQLALLLIG 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
              R F+   +  +     R  ++  K     LM +A  +     K+ S  +        
Sbjct: 60  WSYRRFIGTGSKAYSWFSFRKRNRARKQTSMALMKLAEGDFKEVEKLMSRNA--DYAEQP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQ 174
            + YLL  + A          + LE   ++  T         V  L  +     + ++A+
Sbjct: 118 VVNYLLAAEAAQQRGDEFRVQQHLERAAELADTNQLPVDITRVRILLAQ----NENHAAR 173

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------RNRAIL 228
               + L+ +P  P V       Y     W   +  +   +K A   +      R +A +
Sbjct: 174 TGVDELLNQAPRHPEVLRLAETAYTRTAAWQALLDIIPSMQKIALHTDDELAQLRQKAYI 233

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIW 287
            I     + +  D      +  ++     +   A  +  A+ LI  N    A+ I+    
Sbjct: 234 GIMGQKMSENGCD---GLKNWWKAQPRKVHHDNALRVVLAEHLIECNDPDSAQTIILDGI 290

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           K      +  +   L + +    LK    L + +  +      + +IA++ G   QA   
Sbjct: 291 KRQYDERLILLLPRLKNTDASVILKVLNSLIKQHGPTPLLNSTLGQIAMQQGQWGQAEEA 350

Query: 348 AMLAMKIAPRKEIFLLLAQ 366
              A+K  P    F  LA 
Sbjct: 351 FRNALKQRPDVHDFAWLAD 369


>gi|328472408|gb|EGF43274.1| HemY protein [Vibrio parahaemolyticus 10329]
          Length = 393

 Score = 94.2 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 121/380 (31%), Gaps = 14/380 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   + +    S     V I+  N+    S   ++  +   L    LL  
Sbjct: 1   MIRLIFLFVVLGAGLFAGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIAALAGLFLLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LIKKLVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       +    +         AV        +  R  +  +A    
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLALASQQENAHLAVELTR--AKQFIRDNEFEAAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
                  P+   V   +   Y+  K W   I  + Q  K        +A L+        
Sbjct: 176 QSLKGQYPNNSIVLNLLKTTYMQLKLWQPLIDLMPQLAKAKLVTEEEQAELIQKAQCGLL 235

Query: 238 DKGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +          I      + K+  ++ + +  A + +  +    +A  +L++  K  P 
Sbjct: 236 HEVAQQQGSEGLISHWNSLARKVRQDTHLIACFARELIARKADT-EAFTVLKEALKKQPE 294

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           PE+  +   L   +    +     + +   ++  +   ++          QA     +A+
Sbjct: 295 PELYQLLPDLNLPDIHPVVVFLEGVVKKEADNAAAHSALAHFYFRQEKWQQAQEHFEIAL 354

Query: 353 KIAPRKEIFLLLAQIEQANS 372
           K+      +  LA   +  +
Sbjct: 355 KLRSDVSDYAFLADTLEKQN 374


>gi|206580430|ref|YP_002241135.1| HemY protein [Klebsiella pneumoniae 342]
 gi|288937775|ref|YP_003441834.1| HemY protein [Klebsiella variicola At-22]
 gi|290513170|ref|ZP_06552532.1| hemY protein [Klebsiella sp. 1_1_55]
 gi|206569488|gb|ACI11264.1| HemY protein [Klebsiella pneumoniae 342]
 gi|288892484|gb|ADC60802.1| HemY protein [Klebsiella variicola At-22]
 gi|289774381|gb|EFD82387.1| hemY protein [Klebsiella sp. 1_1_55]
          Length = 398

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE         ++ +  TR               + ++A+    K L+I+P  P V  
Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248
              Q Y     W   +  +    K       +RA L     +   DK    G        
Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEEHRAALEQLAWVGLMDKALADGGSEGLREW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WRNQSRKTRALVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  +  G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHQPEEAA 381


>gi|238892402|ref|YP_002917136.1| putative protoheme IX biogenesis protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238544718|dbj|BAH61069.1| hypothetical protein KP1_0160 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 398

 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE         ++ +  TR               + ++A+    K L+I+P  P V  
Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248
              Q Y     W   +  +    K       +RA L     +   DK    G        
Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEAHRAALEQLAWVGLMDKALADGGSEGLREW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WRNQSRKTRALVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  +  G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHQPEEAA 381


>gi|197287142|ref|YP_002153014.1| protoheme IX biogenesis protein [Proteus mirabilis HI4320]
 gi|227357165|ref|ZP_03841534.1| possible porphoryin biosynthesis protein HemY [Proteus mirabilis
           ATCC 29906]
 gi|194684629|emb|CAR46529.1| putative porphyrin biosynthesis protein [Proteus mirabilis HI4320]
 gi|227162697|gb|EEI47664.1| possible porphoryin biosynthesis protein HemY [Proteus mirabilis
           ATCC 29906]
          Length = 409

 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 134/394 (34%), Gaps = 27/394 (6%)

Query: 1   MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M +++  +  +I+ +I   + ++ +   V I   N    TS   ++ +        +LL 
Sbjct: 1   MFKILLLFVVLIAGIIFGPV-LAGHQGYVFIQTDNWDIETSVTSLVIMFVLLQLILLLLG 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
              R F+   +  +     R   +  K     LM +A  +     K+ S  +        
Sbjct: 60  WCYRRFIGTGSKAYSWFSLRKRSRARKQTRLALMKLAEGDFKQVEKLMSRNA--DYAEQP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQ 174
            + YLL  + A          + LE   ++  T         V  L  +     + ++A+
Sbjct: 118 VVNYLLAAEAAQQRGDEFRVQQHLERASELADTNQLPVDITRVRILLAQ----NENHAAR 173

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------RNRAIL 228
               + L+  P  P V       Y+  + W   +  +   +K A   +      R +A +
Sbjct: 174 TGVDELLNQVPRHPEVLRLAETAYIRTEAWQALLDIIPSMQKIALHTDDELEQLRQQAYI 233

Query: 229 LIARSLENADKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +     + +  D + ++  A             +      A+ LI  N  + A+ I+  
Sbjct: 234 GLMGQKMSENGCDGLKNWWKAQPRKIQHDNGLRFV-----LAEHLIECNDPQTAQTIILD 288

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K +    +  +   L + +    LK    L + +  +      V +IA++ G   QA 
Sbjct: 289 GIKRHYDERLILLLPRLKNSDPDSILKVLNSLIKQHGPTPLLNSTVGQIAMQQGQWAQAE 348

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
                A+K  P    F  LA +    + + +   
Sbjct: 349 TAFRNALKQRPDVHDFAWLADVLDKQNKSVESAK 382


>gi|28899765|ref|NP_799370.1| HemY protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|260365167|ref|ZP_05777732.1| HemY protein [Vibrio parahaemolyticus K5030]
 gi|260878133|ref|ZP_05890488.1| HemY protein [Vibrio parahaemolyticus AN-5034]
 gi|260895810|ref|ZP_05904306.1| HemY protein [Vibrio parahaemolyticus Peru-466]
 gi|260900857|ref|ZP_05909252.1| HemY protein [Vibrio parahaemolyticus AQ4037]
 gi|28808017|dbj|BAC61254.1| HemY protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087172|gb|EFO36867.1| HemY protein [Vibrio parahaemolyticus Peru-466]
 gi|308092785|gb|EFO42480.1| HemY protein [Vibrio parahaemolyticus AN-5034]
 gi|308110581|gb|EFO48121.1| HemY protein [Vibrio parahaemolyticus AQ4037]
 gi|308111031|gb|EFO48571.1| HemY protein [Vibrio parahaemolyticus K5030]
          Length = 393

 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 122/380 (32%), Gaps = 14/380 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N+    S   ++  +   L    LL  
Sbjct: 1   MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIATLAGLFLLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LIKKLVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       +    +         AV        +  R  +  +A    
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLALASQQENAHLAVELTR--AKQFIRDNEFEAAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
                  P+   V   +   Y+  K W   I  + Q  K        +A L+        
Sbjct: 176 QSLKGQYPNNSIVLNLLKTTYMQLKLWQPLIDLMPQLAKAKLVTEEEQAELIQKAQCGLL 235

Query: 238 DKGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +          I      + K+  ++ + +   A+ LI++    +A  +L++  K  P 
Sbjct: 236 HEVAQQQGSEGLISHWNSLARKVKQDTHLIACF-ARDLIARKADTEAFTVLKEALKKQPE 294

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           PE+  +   L   +    +     + +   ++  +   ++          QA     +A+
Sbjct: 295 PELYQLLPDLNLPDIHPVVVFLEGVVKKEADNAAAHSALAHFYFRQEKWQQAQEHFEIAL 354

Query: 353 KIAPRKEIFLLLAQIEQANS 372
           K+      +  LA   +  +
Sbjct: 355 KLRSDVSDYAFLADTLEKQN 374


>gi|262040888|ref|ZP_06014114.1| porphoryin biosynthesis protein HemY [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041777|gb|EEW42822.1| porphoryin biosynthesis protein HemY [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 398

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAKAAQQRGDEARAN 138

Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE         ++ +  TR               + ++A+    K L+I+P  P V  
Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248
              Q Y     W   +  +    K       +RA L     +   DK    G        
Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEAHRAALEQLAWVGLMDKALADGGSEGLREW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WRNQSRKTRALVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  +  G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHQPEEAA 381


>gi|153214862|ref|ZP_01949670.1| hemY protein [Vibrio cholerae 1587]
 gi|124115105|gb|EAY33925.1| hemY protein [Vibrio cholerae 1587]
          Length = 398

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          +    +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQHLEITAQRGIL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                       ++        LK     +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|330812533|ref|YP_004356995.1| heme biosynthesis protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380641|gb|AEA71991.1| putative heme biosynthesis protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 415

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 140/391 (35%), Gaps = 19/391 (4%)

Query: 1   MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M RL +  F VI+      + ++ +   V + + N  Y    +V L+++      W  L 
Sbjct: 1   MKRLYVILFVVIAAAALLGVAIAEHSGYVLVAYKNFRYEAGLWVTLALVAVLWLLWRGLR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHN 118
           A+     +   ++     +    +   A+  G + +A      A++ +H     +     
Sbjct: 61  ALIGLVTTSSGVVNPWSRRNRSRRVQVAIEHGQLDLAEGRWASAQRHLHRAAEAER---Q 117

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYA 177
             L YL   + A  +  Y  +   LE  L+     E A+   + +     GD + A    
Sbjct: 118 PLLYYLGAARAANEQGLYEQSDSLLERALERQPQAELAIALTHAQLQTDRGDTDGALTTL 177

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------L 229
               +  P    V   + + +    +WS  I  L + +K+        A L        L
Sbjct: 178 QAMHERHPHNVQVLRQLQRLHQQRGDWSALIRLLPELRKDKVLPPAELAELERRAWGENL 237

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288
              +    D    + S + A + L        A + A A+ L     + +AE +L    K
Sbjct: 238 TLAAHREEDGSVGLQSLNRAWQQLTSAQRQESALVLAYAEQLRQLGAQVEAEEVLRSALK 297

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            +    +A +Y  +   + V +L+ A    + +      L+ + ++ L+     +A    
Sbjct: 298 RHYDSHLARLYGLVRGNDPVRQLQTAEGWLKDHPADPSLLLTLGRLCLQSSLWGKARDYL 357

Query: 349 MLAMKI----APRKEIFLLLAQIEQANSHNT 375
             ++++        E+  LLAQ+  A   N 
Sbjct: 358 ESSLRVQRNPEACAELARLLAQLGDAERSNQ 388


>gi|149928340|ref|ZP_01916581.1| putative enzyme of heme biosynthesis [Limnobacter sp. MED105]
 gi|149822925|gb|EDM82170.1| putative enzyme of heme biosynthesis [Limnobacter sp. MED105]
          Length = 396

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/362 (13%), Positives = 109/362 (30%), Gaps = 10/362 (2%)

Query: 28  VSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKA 87
           V I +G      S    ++ +        ++    R     P         R  +   +A
Sbjct: 28  VLIFFGQYRIDMSLNFAVAAILLLFLVLYVMMRAWRASSQLPGKFKEYWMNRKQNALLRA 87

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL---E 144
              GL+++   +   A K  +  S+     +  L YL+    A+   +Y++A E L   +
Sbjct: 88  NTQGLIALITGDEQGAHKALNQASKTGIETD--LSYLIRAMSAMQADRYDVAEEILNQEK 145

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             +   +     +      +    D + A         ++   P V    +   +    W
Sbjct: 146 AKVGEHSHALVVLRG--KVALSKQDFSGALGMLEAMDPLAAKLPQVQRLRMLALMGLGRW 203

Query: 205 SRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             A+                +N A++ I   L      D          +  +   ++  
Sbjct: 204 QDALVQYRACVAVSALTNGEKNEALMRIYAGLGENAGQDASKMQEVLSNAKPVELENVGV 263

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
               A  L+       A  +LE     N + ++  +Y  +        L    RL   + 
Sbjct: 264 LRMLATGLLRTGLITAARTLLETALNQNYNKDLLPVYHQVSVLEPREALPNVERLLAQHP 323

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             +  L + + +        +A ++        P   +   L ++ +A +   ++   W 
Sbjct: 324 ADLRLLELAADVCEREQLWGKAISRFEAVYAKQPSAHVAGKLERLYEAANQG-ERAKAWR 382

Query: 383 QS 384
           + 
Sbjct: 383 EK 384


>gi|254291926|ref|ZP_04962707.1| hemY protein [Vibrio cholerae AM-19226]
 gi|150422136|gb|EDN14102.1| hemY protein [Vibrio cholerae AM-19226]
          Length = 398

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          +    +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPRLVKAKRLSNEEAQQLEITAQRGIL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                       ++        LK     +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 ATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|269964922|ref|ZP_06179092.1| hemY protein [Vibrio alginolyticus 40B]
 gi|269830398|gb|EEZ84622.1| hemY protein [Vibrio alginolyticus 40B]
          Length = 393

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 121/386 (31%), Gaps = 26/386 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RLI  F V+   +      S     V I+   +    S   ++  +   L    LL  
Sbjct: 1   MFRLIFLFVVLGAGLFVGTQFSGQQGYVLISIAEKTIEMSVTTLVVFVIAALAGLFLLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R      +    G++ +   +   A K  +  +  H      
Sbjct: 61  LIKKLVYASSTTWNYFSVRKMRHSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L YL+  + A  +       +    +         AV  L      I D          A
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLELASQQENAHLAVE-LTRAKQFIRDNE-----FESA 171

Query: 181 LD--ISPDAPWVTEA-VVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
            D   S  + + + + V+      Y+  K W   I  L Q  K     +   A L+    
Sbjct: 172 FDTLQSLKSQYASNSIVLNLLKTTYMQLKLWQPLIDLLPQLTKAKLISDEEHAELIQKAQ 231

Query: 234 LENADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +          I         +K   + +    C A+ LI++    +A  +L++ 
Sbjct: 232 CGLLHEVAQQQGSEGLISHWNSLSRKVKQDTHLV---ACFARELITRKADAEAFTVLKEA 288

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            K  P PE+  +   L   +T   +     + +   ++  +   ++          +A  
Sbjct: 289 LKKQPAPELYQLLPDLNLPDTHPVVVFLEGVVKKEPDNAAAHSALAHFYFRQEKWQEAQD 348

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANS 372
              +A+K+      +  LA   +  +
Sbjct: 349 HFEIALKLRSDVSDYAFLADTLEKQN 374


>gi|153826289|ref|ZP_01978956.1| hemY protein [Vibrio cholerae MZO-2]
 gi|153830627|ref|ZP_01983294.1| hemY protein [Vibrio cholerae 623-39]
 gi|229515849|ref|ZP_04405307.1| HemY-like protein [Vibrio cholerae TMA 21]
 gi|148873899|gb|EDL72034.1| hemY protein [Vibrio cholerae 623-39]
 gi|149739957|gb|EDM54136.1| hemY protein [Vibrio cholerae MZO-2]
 gi|229347112|gb|EEO12073.1| HemY-like protein [Vibrio cholerae TMA 21]
 gi|327483018|gb|AEA77425.1| HemY protein [Vibrio cholerae LMA3894-4]
          Length = 398

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          +    +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                       ++        LK     +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 ATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|229527141|ref|ZP_04416535.1| HemY-like protein [Vibrio cholerae 12129(1)]
 gi|229335372|gb|EEO00855.1| HemY-like protein [Vibrio cholerae 12129(1)]
          Length = 398

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 115/383 (30%), Gaps = 20/383 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRY 176
            L YL+  + A          ++   +         AV        +    GD  +A   
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDRYLALAAQQNNSTLAVELTR--AKQQLSDGDNQAALET 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            T+     P    V   + Q Y    EW   +  L +  K  +  N     L I      
Sbjct: 175 LTQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEVQQLEITAQRGI 234

Query: 237 ADKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
                        ++        LK     +M  I     LI +    +A  ++++  K 
Sbjct: 235 LQDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKK 291

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
              PE+  +   L   +    +         +  + E+   + ++ L       A     
Sbjct: 292 QATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLRDKHWADAQKHLE 351

Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372
            A+ +      +  LA   +  +
Sbjct: 352 KALSLRSSVSDYAYLADALEKQN 374


>gi|152972790|ref|YP_001337936.1| putative protoheme IX biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|329997500|ref|ZP_08302802.1| hemY protein [Klebsiella sp. MS 92-3]
 gi|150957639|gb|ABR79669.1| hypothetical protein KPN_04301 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328539068|gb|EGF65107.1| hemY protein [Klebsiella sp. MS 92-3]
          Length = 398

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE         ++ +  TR               + ++A+    K L+I+P  P V  
Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248
              Q Y     W   +  +    K       +RA L     +   DK    G        
Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEAHRAALEQLAWVGLMDKALADGGSEGLREW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WRNQSRKTRAMVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  +  G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHQPEEAA 381


>gi|77164033|ref|YP_342558.1| HemY-like [Nitrosococcus oceani ATCC 19707]
 gi|254435079|ref|ZP_05048586.1| HemY N-terminal domain protein [Nitrosococcus oceani AFC27]
 gi|76882347|gb|ABA57028.1| HemY-like protein [Nitrosococcus oceani ATCC 19707]
 gi|207088190|gb|EDZ65462.1| HemY N-terminal domain protein [Nitrosococcus oceani AFC27]
          Length = 427

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 137/402 (34%), Gaps = 16/402 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVS-HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++ + +  ++ ++     +++      + I +G  +  T+  + + +L        L   
Sbjct: 1   MKAVIFGLIVLILAIGLELLTHDDSGYLVIGYGQWMIETTLTLAVIVLGLIFIGGYLALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                   P  L     +R   +  K L  GL+ I   N   A +  + V      +   
Sbjct: 61  FVSHIGKAPRRLGESRQRRRSSRASKMLIEGLIDIEEGNWDRAER--ALVKDIAYSNTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYAT 178
           L Y+   + A  +  Y    +    + +           L     +   G    A     
Sbjct: 119 LNYIAAARSAQNQGAYER-RDHYLHLAREAVPAATFAIELIQAELQVNSGQFEEALAILN 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
               + P  P   + +   Y+  ++W + +  L Q  K           L +   +E   
Sbjct: 178 HLRTLDPRHPQPLKLLKSLYLQQRDWDQLLGLLLQLCKRRLVSKEEAHSLEVMAHVELLQ 237

Query: 239 KGDMIASYHDAIESLKLCDNS------IMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     S    I+  K   N       I+A+   A  LI +N+   AE +L+   K N  
Sbjct: 238 EAAQSESNAALIDRWKAVPNRFRKHPKIVAAYVYA--LIDRNEHDLAEQLLQDTLKGNWS 295

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            E+  +Y  + S + V +L RA        ++   L+ + ++A   G   +A      ++
Sbjct: 296 DELIYLYGLVQSSDLVAQLTRAEAWLSQQGDNPWLLLTLGRLAQYNGLWGKARQYLETSI 355

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393
             APR E +  L ++ +    +++  L      L  A    +
Sbjct: 356 AYAPRSEAYHELGKVLE-EIGDSEAALECYSKGLSMATRGAV 396


>gi|254226595|ref|ZP_04920176.1| hemY protein [Vibrio cholerae V51]
 gi|125620867|gb|EAZ49220.1| hemY protein [Vibrio cholerae V51]
          Length = 398

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          +    +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                       ++        LK     +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|262273220|ref|ZP_06051036.1| HemY-like protein [Grimontia hollisae CIP 101886]
 gi|262222798|gb|EEY74107.1| HemY-like protein [Grimontia hollisae CIP 101886]
          Length = 395

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 123/397 (30%), Gaps = 17/397 (4%)

Query: 1   MLRLIRYFFVISLVICSFII--VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL 58
           M++++    VI+L+    +   ++     V I+  N+    S   ++ ++ F   A  +L
Sbjct: 1   MIKIL--LLVIALIAGLVVGPDLAGNQGYVLISAANQTIEMSVSTLVILVVFAFAALFIL 58

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118
             + R   S  +        R   K       GL+ +   +   + K+   +   +    
Sbjct: 59  EWLIRKLFSLSSSTRGWFSGRKNKKARMLTNEGLLKLLEGDWKQSEKL--LLKGVNHSDA 116

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRY 176
             L YL   + A      +   ++             A  +L       R G    A   
Sbjct: 117 PLLNYLAAAEAAQGRGDIDN-RDRYLQQAADFGIDNLAT-ALTRAKLQYRQGQYEEALAS 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIAR 232
               +D +P  P +   +   Y+  ++W   +  +      K  +  E  R         
Sbjct: 175 LQGLVDANPRNPVLLSLLKDTYLKLQDWQALLRLMPSLKRVKAVSEAEAERLELKAECGL 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
               A +              +          C  K LI++    +A +IL +  K +P 
Sbjct: 235 MAHIATQKGSDGLLAHWNSLSRSARQQPKLIGCLVKQLIARKADSEAYIILRENLKKHPD 294

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             + ++   L   +    + +   +   N+ +  +   + ++    G   +A      A+
Sbjct: 295 ESLISLVPELSLPDYHPAILKLQDVLRYNENNPVTHSALGQLYFREGKWAEARTHFEKAL 354

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDK---ILYWTQSAL 386
            I P    +  L    +  +  +          + AL
Sbjct: 355 DIRPDVSDYAWLVDTLEKLNDPSAANHLSREALKLAL 391


>gi|119475321|ref|ZP_01615674.1| uncharacterized enzyme of heme biosynthesis [marine gamma
           proteobacterium HTCC2143]
 gi|119451524|gb|EAW32757.1| uncharacterized enzyme of heme biosynthesis [marine gamma
           proteobacterium HTCC2143]
          Length = 407

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 129/365 (35%), Gaps = 19/365 (5%)

Query: 25  PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84
           P  + I++G+    +S ++ L +   F F     F+V R  ++  + L   L  R + + 
Sbjct: 26  PGYLLISYGHYTVESSVWIGLGVFLLFFFMIYGFFSVLRRTINGGSALSGWLSGRGHRRS 85

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
            K    G++S    N  L+++  S  +   T     L YL+  + +              
Sbjct: 86  QKQTTKGIISFIEGNWRLSQRTLSRAAA--TSETPLLNYLIAARASHRLGDEKETR-AFL 142

Query: 145 MMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
              +   T       L         G    +    T+    +   P+V   + Q Y    
Sbjct: 143 KKAEASTTGASNAVGLTQAELQLSSGQFEQSLATLTRVRRNASKQPFVLHLLRQVYEGLN 202

Query: 203 EWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           +W   +  + + KK++     +   ++L A      D           +E  KL      
Sbjct: 203 DWQALLALIPELKKHSVLSVEKLDDLVLEASQKSLVDAAKTRGVSASQLE--KLWAQLPK 260

Query: 262 ASI-------CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
           A++       C A  LI+  + +KAE ++    K +    + + Y  + +++   +L  A
Sbjct: 261 AAVKNSETVACYADQLIALGEMQKAEKLIRSQLKKDWDRALISRYGKVEADDVAKQLIHA 320

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF----LLLAQIEQA 370
               +        L+ + +I+L      +A      ++K+    E++     LLA + + 
Sbjct: 321 ENWLKERNNDAALLLCLGRISLRNSLWGKAREYFENSLKLEKSAEVYGELARLLAHLGEV 380

Query: 371 NSHNT 375
              N 
Sbjct: 381 EKSND 385


>gi|229525013|ref|ZP_04414418.1| HemY-like protein [Vibrio cholerae bv. albensis VL426]
 gi|297581841|ref|ZP_06943762.1| hemY protein [Vibrio cholerae RC385]
 gi|229338594|gb|EEO03611.1| HemY-like protein [Vibrio cholerae bv. albensis VL426]
 gi|297533935|gb|EFH72775.1| hemY protein [Vibrio cholerae RC385]
          Length = 398

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 116/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          ++   +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                       ++        LK     +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|229520091|ref|ZP_04409519.1| HemY-like protein [Vibrio cholerae TM 11079-80]
 gi|229342879|gb|EEO07869.1| HemY-like protein [Vibrio cholerae TM 11079-80]
          Length = 398

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          +    +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                       ++        LK     +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 AAPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|15640149|ref|NP_229776.1| hemY protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587739|ref|ZP_01677500.1| hemY protein [Vibrio cholerae 2740-80]
 gi|121728284|ref|ZP_01681315.1| hemY protein [Vibrio cholerae V52]
 gi|147673163|ref|YP_001218301.1| hemY protein [Vibrio cholerae O395]
 gi|153822310|ref|ZP_01974977.1| hemY protein [Vibrio cholerae B33]
 gi|227080353|ref|YP_002808904.1| hemY protein [Vibrio cholerae M66-2]
 gi|229508395|ref|ZP_04397899.1| HemY-like protein [Vibrio cholerae BX 330286]
 gi|229508924|ref|ZP_04398414.1| HemY-like protein [Vibrio cholerae B33]
 gi|229517038|ref|ZP_04406484.1| HemY-like protein [Vibrio cholerae RC9]
 gi|229606668|ref|YP_002877316.1| HemY-like protein [Vibrio cholerae MJ-1236]
 gi|254851501|ref|ZP_05240851.1| hemY protein [Vibrio cholerae MO10]
 gi|298501114|ref|ZP_07010914.1| hemY protein [Vibrio cholerae MAK 757]
 gi|9654517|gb|AAF93295.1| hemY protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548038|gb|EAX58116.1| hemY protein [Vibrio cholerae 2740-80]
 gi|121629414|gb|EAX61843.1| hemY protein [Vibrio cholerae V52]
 gi|126520136|gb|EAZ77359.1| hemY protein [Vibrio cholerae B33]
 gi|146315046|gb|ABQ19585.1| hemY protein [Vibrio cholerae O395]
 gi|227008241|gb|ACP04453.1| hemY protein [Vibrio cholerae M66-2]
 gi|227011881|gb|ACP08091.1| hemY protein [Vibrio cholerae O395]
 gi|229346101|gb|EEO11073.1| HemY-like protein [Vibrio cholerae RC9]
 gi|229354041|gb|EEO18974.1| HemY-like protein [Vibrio cholerae B33]
 gi|229354668|gb|EEO19590.1| HemY-like protein [Vibrio cholerae BX 330286]
 gi|229369323|gb|ACQ59746.1| HemY-like protein [Vibrio cholerae MJ-1236]
 gi|254847206|gb|EET25620.1| hemY protein [Vibrio cholerae MO10]
 gi|297540148|gb|EFH76209.1| hemY protein [Vibrio cholerae MAK 757]
          Length = 398

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 119/382 (31%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          ++   +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235

Query: 238 D-----KGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 KG      H A  S KL      +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASPKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|153803399|ref|ZP_01957985.1| hemY protein [Vibrio cholerae MZO-3]
 gi|124121056|gb|EAY39799.1| hemY protein [Vibrio cholerae MZO-3]
          Length = 398

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59
           M+RLI  F V+ L +      +     V I+  NR    S    ++ I+      + L F
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +   +      +    R   +  +    G++ +   +   A K  +  +  H     
Sbjct: 61  LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177
            L YL+  + A          +    +         AV  L     +   GD  +A    
Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNRAALETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+     P    V   + Q Y    EW   +  L +  K  +  N     L I       
Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                       ++        LK     +M  I     LI +    +A  ++++  K  
Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             PE+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 ATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|91227537|ref|ZP_01261874.1| HemY protein [Vibrio alginolyticus 12G01]
 gi|91188561|gb|EAS74853.1| HemY protein [Vibrio alginolyticus 12G01]
          Length = 393

 Score = 91.1 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 120/386 (31%), Gaps = 26/386 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RLI  F V+   +      S     V I+   +    S   ++  +   L    LL  
Sbjct: 1   MFRLIFLFVVLGAGLFVGTQFSGQQGYVLISIAEKTIEMSVTTLVVFVIAALAGLFLLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R      +    G++ +   +   A K  +  +  H      
Sbjct: 61  LIKKLVYASSTTWNYFSVRKMRHSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L YL+  + A  +       +    +         AV  L      I D          A
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLELASQQENAHLAVE-LTRAKQFIRDNE-----FESA 171

Query: 181 LD--ISPDAPWVTEA-VVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
            D   S  + + + + V+      Y+  K W   I  L Q  K         A L+    
Sbjct: 172 FDTLQSLKSQYASNSIVLNLLKTTYMQLKLWQPLIDLLPQLTKAKLITEEEHAELIQKAQ 231

Query: 234 LENADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +          I         +K   N +    C A+ LI++    +A  +L++ 
Sbjct: 232 CGLLHEVAQQQGSEGLISHWNSLSRKVKQDTNLV---ACFARELITRKADAEAFTVLKEA 288

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            K  P PE+  +   L   +T   +     + +   ++  +   ++          +A  
Sbjct: 289 LKKQPAPELYQLLPDLNLPDTHPVVVFLEGVVKKEPDNAAAHSALAHFYFRQERWQEAQD 348

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANS 372
              +A+K+      +  LA   +  +
Sbjct: 349 HFEIALKLRSDVSDYAFLADTLEKQN 374


>gi|301386720|ref|ZP_07235138.1| hemY protein, putative [Pseudomonas syringae pv. tomato Max13]
          Length = 414

 Score = 90.4 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 142/393 (36%), Gaps = 23/393 (5%)

Query: 1   MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R+ + +F  I       + V+ +   V I + N  Y +S +  L++L   L    +L 
Sbjct: 1   MKRVYVLFFIAIVAAALIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +     +   ++     +    +   A+  G M +A      A++     ++     + 
Sbjct: 61  LLITLLTTSGRVVNPWSRRTRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRY 176
            L Y+   + A  + +Y      LE  L+     E AV      +      GD + A   
Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------- 228
                +  P  P V   + + Y    +WS  I  + + +K+     +  A L        
Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236

Query: 229 LIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285
           L   +  +  +G    + S   A + L          + A A  L     + +AE +L  
Sbjct: 237 LTLAAYRDEQEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K + +  +A +Y  +   + + +L+ A    + +      L+ + +I L+     +A 
Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356

Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374
                ++++        E+  LLAQ+ + +  N
Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389


>gi|213971707|ref|ZP_03399813.1| hemY protein [Pseudomonas syringae pv. tomato T1]
 gi|302062170|ref|ZP_07253711.1| hemY protein, putative [Pseudomonas syringae pv. tomato K40]
 gi|302130380|ref|ZP_07256370.1| hemY protein, putative [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213923525|gb|EEB57114.1| hemY protein [Pseudomonas syringae pv. tomato T1]
          Length = 414

 Score = 90.4 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 142/393 (36%), Gaps = 23/393 (5%)

Query: 1   MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R+ + +F  I       + V+ +   V I + N  Y +S +  L++L   L    +L 
Sbjct: 1   MKRVYVLFFIAIVAAALIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +     +   ++     +    +   A+  G M +A      A++     ++     + 
Sbjct: 61  LLITLLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176
            L Y+   + A  + +Y      LE  L+     E AV      +      GD + A   
Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------- 228
                +  P  P V   + + Y    +WS  I  + + +K+     +  A L        
Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236

Query: 229 LIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285
           L   +  +  +G    + S   A + L          + A A  L     + +AE +L  
Sbjct: 237 LTLAAYRDEQEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K + +  +A +Y  +   + + +L+ A    + +      L+ + +I L+     +A 
Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356

Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374
                ++++        E+  LLAQ+ + +  N
Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389


>gi|253997744|ref|YP_003049807.1| HemY domain-containing protein [Methylovorus sp. SIP3-4]
 gi|313199808|ref|YP_004038466.1| hemy domain-containing protein [Methylovorus sp. MP688]
 gi|253984423|gb|ACT49280.1| HemY domain protein [Methylovorus sp. SIP3-4]
 gi|312439124|gb|ADQ83230.1| HemY domain protein [Methylovorus sp. MP688]
          Length = 393

 Score = 90.0 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 130/385 (33%), Gaps = 23/385 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  L     ++ L +   ++  +    V I         S  ++L ++     +  LL  
Sbjct: 1   MRWLFWILLILGLAVGISLLAVNNQGYVLIVRPPYRMELSLNLLLVMILGGFISLHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + ++    PA +     +R    G  AL  GL S+A     LA K  +         N  
Sbjct: 61  LIQYTRHLPASVRSYKEERRIRLGRAALSEGLQSLAEGRYLLAEKAANKALA--LEENPG 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178
           L  L+  + A   +  +   +      +  A        LY     + D   N A     
Sbjct: 119 LSTLVAARAAHKLKNKSQ-RDFYLAEAERIAPDAAVARLLYQAEFMLDDRRYNEALNVLH 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSL 234
           K   +    P      ++  V  K W + +  L + +K+           R         
Sbjct: 178 KLDKLESKYPPALRLELKAQVHLKNWEQVLVTLRRLEKHDAIESWHLRELRQQAHTHLLQ 237

Query: 235 ENADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----KIWKV 289
             AD  D + +Y   + E  +L +     +  AA++ I      +A  I+E    K W  
Sbjct: 238 RLADDLDKLNAYWKKMPEEDRLNNR---IACIAAQTFIQAGAGDQAAEIVEMSLTKGWDS 294

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                +A +    LS     +L++A      ++   + L  +  + + +    +A +   
Sbjct: 295 K----LAGMLGDCLSSQPQKQLQQAEHWLLSHENDADLLRSLGNLCVRLSLWGKAQSYFE 350

Query: 350 LAMKIAPRKEIFLLLAQI--EQANS 372
            ++ + P     L LA++  E+  +
Sbjct: 351 ASLSVKPSAATHLALARLLDERGET 375


>gi|317494821|ref|ZP_07953232.1| hemY protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917146|gb|EFV38494.1| hemY protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 401

 Score = 90.0 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 121/395 (30%), Gaps = 29/395 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML+++  F ++   I    + + +   V I        TS   ++ +L   +     +  
Sbjct: 1   MLKVLLLFIILIAGIVLGPMFAGHQGYVLIQTDTYNIETSVTTLVIMLILLIVVLFAIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R      A        R   +  K    GLM +A  +     K+ S  +         
Sbjct: 61  ILRRVFRTGARTRGWFVGRKRTRARKQTREGLMKLAEGDYTQVEKLLSRNADHA--EQPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172
           + YLL  + A         ++ LE   +        +  TR              G+ ++
Sbjct: 119 VNYLLAAEAAQQRGDELRVNQYLERASEVADSNQLPVDITRV-------RIQLARGENHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAIL 228
           A+      L+++P  P V     Q YV  + +   +  L         N  E  + +   
Sbjct: 172 ARHGVDALLNVAPRHPEVLRLAEQAYVRTQAYQSLLEILPSLAKANVYNDDEIQQLQLKA 231

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I    E    G  +       +  +   +     +   + LI  N    A+ IL    K
Sbjct: 232 YIGLMNERMANGGSLGLKSWWNDQSRKTRHETALQVAMIEHLIECNDHDTAQQILVDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVI---VSKIALEMGSIDQA 344
                 +  +   L S N         +L     K+   S ++   + ++ +  G   QA
Sbjct: 292 RKFDERLVLLMPKLKSGNPEQ----LEKLLNQQIKQHGASALLNSTLGQLLMRHGEWQQA 347

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
                 A+K  P    +  LA +        +   
Sbjct: 348 SEAFRAALKQRPDAYDYAWLADVLDKLHRPEEAAQ 382


>gi|296105315|ref|YP_003615461.1| putative protoheme IX biogenesis protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295059774|gb|ADF64512.1| putative protoheme IX biogenesis protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 399

 Score = 90.0 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 61/382 (15%), Positives = 114/382 (29%), Gaps = 26/382 (6%)

Query: 11  ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70
           I+ ++   + ++ +   V I   N    TS   ++ IL   +   + L  + R      A
Sbjct: 12  IAGIVLGPM-LAGHQGYVLIQTDNYNIETSVTGLVIILILGVVVLLALEWILRRIFRTGA 70

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI 129
                   R   +  K     L+ +A  +     K M              + YLL  + 
Sbjct: 71  HTRGWFVGRKRRRARKQTEQALIKLAEGDYQQVEKLMSKNADH---AEQPVVNYLLAAEA 127

Query: 130 ALAERQYNIAHEKLEM---MLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           A        A++ LE    M          TR               + ++A+    + L
Sbjct: 128 AQQRGDEARANQHLERASEMASDNQIPVEITRV-------RLQLARNENHAARHGVDRLL 180

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNR---NRAILLIARSLEN 236
           +I+P  P V     Q Y+    W   +  +    K     + +R    R   +       
Sbjct: 181 EITPRHPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDELQRMAWIGLMDQAR 240

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD G          +S K     +   +  A+ LI  +    A+ IL    K      + 
Sbjct: 241 ADLGSDGLKTWWKNQSRKTRQQ-VPLQVAMAEHLIECDDHDTAQEILLDGLKRQYDDRLV 299

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +   L + N     K   +  +   +       + +  ++ G   +A      A+K  P
Sbjct: 300 MVIPRLKTNNPEQIEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRP 359

Query: 357 RKEIFLLLAQIEQANSHNTDKI 378
               +  LA          +  
Sbjct: 360 DAFDYAWLADTLDKQHKPEEAA 381


>gi|28867371|ref|NP_789990.1| hemY protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28850605|gb|AAO53685.1| hemY protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 414

 Score = 90.0 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 141/393 (35%), Gaps = 23/393 (5%)

Query: 1   MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R+ + +F  I       + V+ +   V I + N  Y +S +  L++L   L    +L 
Sbjct: 1   MKRVYVLFFIAIVAAALIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +     +   ++     +    +   A+  G M +A      A++     ++     + 
Sbjct: 61  LLITLLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176
            L Y+   + A  + +Y      LE  L+     E AV      +      GD + A   
Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---------- 226
                +  P  P V   + + Y    +WS  I  + + +K+     +  A          
Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285
           + L A   E+      + S   A + L          + A A  L     + +AE +L  
Sbjct: 237 LTLAAYRDEHEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K + +  +A +Y  +   + + +L+ A    + +      L+ + +I L+     +A 
Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356

Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374
                ++++        E+  LLAQ+ + +  N
Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389


>gi|331018511|gb|EGH98567.1| hemY protein, putative [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 414

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 141/393 (35%), Gaps = 23/393 (5%)

Query: 1   MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R+ + +F  I       + V+ +   V I + N  Y +S +  L++L   L    +L 
Sbjct: 1   MKRVYVLFFIAIVAATLIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +     +   ++     +    +   A+  G M +A      A++     ++     + 
Sbjct: 61  LLITLLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176
            L Y+   + A  + +Y      LE  L+     E AV      +      GD + A   
Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---------- 226
                +  P  P V   + + Y    +WS  I  + + +K+     +  A          
Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285
           + L A   E+      + S   A + L          + A A  L     + +AE +L  
Sbjct: 237 LTLAAYRDEHEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K + +  +A +Y  +   + + +L+ A    + +      L+ + +I L+     +A 
Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356

Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374
                ++++        E+  LLAQ+ + +  N
Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389


>gi|312795372|ref|YP_004028294.1| HemY protein [Burkholderia rhizoxinica HKI 454]
 gi|312167147|emb|CBW74150.1| HemY protein [Burkholderia rhizoxinica HKI 454]
          Length = 397

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/389 (13%), Positives = 124/389 (31%), Gaps = 10/389 (2%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           ++    + +  +   ++ +H    V I W       S  + ++ L        ++    R
Sbjct: 6   ILWLMALFATAVLLALVGAHDAGQVLIIWAPYRIDISLNLFVAALVVSFVVLYIVVRSIR 65

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
             L  P  +     +      ++AL   + ++ A     A       S            
Sbjct: 66  AVLKMPERVAAYRARVRLANAHQALREAIGNLYAGRFSRAENAAREASAFDANKAPA--G 123

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L+    A   R++    ++    +     +E  + +         D + A    T+    
Sbjct: 124 LIGAAAAHRMREFAR-RDEWLAQVTDNDWQEARLMASAELRADARDADGALAALTEMRAQ 182

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGD 241
                   +  ++     K W+  +  +   +K++            L A  L    + +
Sbjct: 183 GGRRIHALQIALRAQQQLKNWAEVLKLVKTLEKREAIHPAVSVHLKQLAAEHLLRDRRHN 242

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
             A              S   +  AA+ LI+ N+   A  I+E+    +  P +   Y  
Sbjct: 243 PDALLQLWQSLSAAERQSPRIADLAAELLIALNRPADARKIVEEALAHHWDPRLLRRYAD 302

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---- 357
              ++ +  ++RA   ++  ++  +    + ++ L+     +A A    A+K+A      
Sbjct: 303 CADDDPLPLIQRAEAWQKERQDDPDLSFTLGRLCLQQKLWGKAQAFLEQALKLAADNEPL 362

Query: 358 -KEIFLLLAQIEQANSHNTDKILYWTQSA 385
                  LA++ +   +      ++  SA
Sbjct: 363 QIRAHRALARLHEQLGNAQQAAEHYRASA 391


>gi|71909283|ref|YP_286870.1| HemY, N-terminal [Dechloromonas aromatica RCB]
 gi|71848904|gb|AAZ48400.1| HemY, N-terminal [Dechloromonas aromatica RCB]
          Length = 394

 Score = 89.6 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/394 (13%), Positives = 116/394 (29%), Gaps = 12/394 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  L     +  L +   +        V + +       S  +++  L     A+  +  
Sbjct: 1   MRGLFWILALFGLAVAVALGARLNDGYVLLVFPPWRAEVSLNLLILALIGLFMAFYAVMR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V       P  +     ++  DK        +  +        + M              
Sbjct: 61  VFSATFGLPKRVREYRARQQRDKAGLVFQDAVRLLF--EGRFGQAMKKAAEAHGAGTAPG 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL---EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           L  L+  + A        A ++          P T    +      +      ++A    
Sbjct: 119 LSALIAARAAQRM--REPAKQQYWLEHAKTDDPRTEAATLMLDAEMANEERRFDAALAAL 176

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLEN 236
            K               ++    A +W   I  + Q  K++A        IL  A     
Sbjct: 177 EKLQGKQGRHIAALRLELRARQGAGDWDGVIKLVRQLAKRDALPDEVVGEILTQAHLASI 236

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----H 292
           A +G         + +L   +      + AA++L +     +A+ ++E            
Sbjct: 237 AKRGVDERRLISYLRNLPNEERGRRVVLAAARALNALGANGEAQKLIESALDAAGDDAWQ 296

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           PE+  IY  L       ++ +A      + +    L+ + ++        +A +    ++
Sbjct: 297 PELLAIYGRLSDGELTARIAKAEAWLRRHPDDALLLMALGRMCQRQRLWGKAQSYLEASL 356

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +   +E  L LA++      + +   ++  SAL
Sbjct: 357 SVEVTQEAHLELARLFDQLGKSEEANKHYRASAL 390


>gi|254230104|ref|ZP_04923500.1| HemY protein [Vibrio sp. Ex25]
 gi|262392877|ref|YP_003284731.1| HemY-like protein [Vibrio sp. Ex25]
 gi|151937349|gb|EDN56211.1| HemY protein [Vibrio sp. Ex25]
 gi|262336471|gb|ACY50266.1| HemY-like protein [Vibrio sp. Ex25]
          Length = 393

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 54/380 (14%), Positives = 114/380 (30%), Gaps = 14/380 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RLI  F V+   +      S     V I+   +    S   ++  +   L    LL  
Sbjct: 1   MFRLIFLFVVLGAGLFVGTQFSGQQGYVLISIAEKTIEMSVTTLVVFVIAALAGLFLLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R      +    G++ +   +   A K  +  +  H      
Sbjct: 61  LIKKLVYASSTTWNYFSVRKMRHSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       +    +         AV        +  R  +  +A    
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLELASQQENAHLAVELTR--AKQFIRDNEFEAAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
                       V   +   Y+  K W   I  L Q  K         A L+        
Sbjct: 176 QSLKGQYASNSIVLNLLKTTYMQLKLWQPLIDLLPQLTKAKLITEEEHAELIQKAQCGLL 235

Query: 238 DKGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +          I      + K+  +      C A+ LI++    +A  +L++  K  P 
Sbjct: 236 HEVAQQQGSEGLISHWNGLARKVKQD-THLVACFARELIARKADAEAFTVLKEALKKQPA 294

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           PE+  +   L   +    +     + +   ++  +   ++          +A     +A+
Sbjct: 295 PELYQLLPDLNLPDIHPVVVFLEGVVKKEPDNAAAHSALAHFYFRQEKWQEAQDHFEIAL 354

Query: 353 KIAPRKEIFLLLAQIEQANS 372
           K+      +  LA   +  +
Sbjct: 355 KLRSDVSDYAFLADTLEKQN 374


>gi|213018861|ref|ZP_03334669.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|212995812|gb|EEB56452.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 243

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 14/142 (9%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++  +L ++W  AI+ L +  K       +  +  A+   A + +   KG    +     
Sbjct: 104 IEHCILQEDWINAISKLKEAIKFNIFLPFDRKKMLAVFYCALAKQYESKGSFCKAIDYLA 163

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           ++          +   A+  I   K RKA  +LE+ ++VNP P+ A +Y  L +      
Sbjct: 164 KAQSYYATFQPINYLKAELYIKLEKIRKASTVLEEEYRVNPTPQSARMYIKLNN------ 217

Query: 311 LKRALRLEEINKESVESLVIVS 332
            K A RL  +  +     ++++
Sbjct: 218 -KGAERLYNLRPDYY---LVIA 235


>gi|258626629|ref|ZP_05721459.1| hemY protein [Vibrio mimicus VM603]
 gi|258581133|gb|EEW06052.1| hemY protein [Vibrio mimicus VM603]
          Length = 398

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 119/382 (31%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+ L +      +     V I+  NR    S   ++  +   L A   L  
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          +    +         AV        +    GD  +A    
Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALSTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+  +  P+   V   + Q Y    +W   +  L +  K  +  N     L +       
Sbjct: 176 TQLQNSHPNNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235

Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 KG      H A  S KL      +M  I     LI +    +A  ++++  K  
Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P  E+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|157144430|ref|YP_001451749.1| putative protoheme IX biogenesis protein [Citrobacter koseri ATCC
           BAA-895]
 gi|157081635|gb|ABV11313.1| hypothetical protein CKO_00144 [Citrobacter koseri ATCC BAA-895]
          Length = 399

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 107/365 (29%), Gaps = 11/365 (3%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLVIILIVMMVILFAIEWLLRRVFRTGAHTRGWFVGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           + LE    +                      + ++A+    K L+++P  P V     Q 
Sbjct: 140 QHLERAAELAGNDTIPVEIAR--VRLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQA 197

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESL 253
           Y+    WS  +  +    K       +RA+L     +   D+                  
Sbjct: 198 YIRTGAWSSLLDIIPSMAKANVGDEEHRAMLEQQAWIGLMDQARADQGSEGLREWWKNQS 257

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +   + +   +  A+ LI  +    A+ I+    K      +      L + N     K 
Sbjct: 258 RKTRHQVPLQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLKTNNPEQLEKV 317

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
             +  +   +       + +  ++ G   +A      A+K  P    +  LA        
Sbjct: 318 LRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATFAFRAALKQRPDAYDYAWLADALDRLHQ 377

Query: 374 NTDKI 378
             +  
Sbjct: 378 PEEAA 382


>gi|229593298|ref|YP_002875417.1| putative HemY domain protein [Pseudomonas fluorescens SBW25]
 gi|229365164|emb|CAY53420.1| putative HemY domain protein [Pseudomonas fluorescens SBW25]
          Length = 413

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 132/375 (35%), Gaps = 27/375 (7%)

Query: 21  VSHYPEDVSITWGNR-LYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
           +S +   V IT+ +   Y +S +  L  ++    A  L+  +     +   ++     + 
Sbjct: 22  ISKHTGYVLITYPHVLHYESSLWATLVAVFAVGLAIYLIRVLLSLITTSGGVVNPWSRRN 81

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
              +   A+  G M +A      A + +H     +       L YL   + A  + +Y  
Sbjct: 82  RSRRVQVAIEQGQMDLAEGRWASAERHLHRAAEAER---QPLLYYLGAARAANEQGRYEE 138

Query: 139 AHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           +   LE  L+     E AV   + +     GD + A        +  P    V   + + 
Sbjct: 139 SDGLLERALERQPQAELAVALSHAQLQLDRGDTDGALITLQAMHERHPHNAQVLRQLQRL 198

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILL-------IARSLENADKGDM-----IAS 245
           +    +WS  I  L + +K+        A L        ++ + +  ++G+        +
Sbjct: 199 HQQRGDWSSVIRLLPELRKDKVLPASELAELERRAWGENLSLAAQREEQGEAGLQSLERA 258

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-ILEKIWKVNPHPEIANIYTHLLS 304
           +     + +     ++A     + L +  +  +A    +++ +  +    +  +Y  L  
Sbjct: 259 WQQLTSAQRQEPQLVLAYAEQLRQLGADTQAEEALRGAIKRGYDSH----LIRLYGLLRG 314

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEI 360
            +   +LK A    + +      L+ + ++ L+     +A      ++++        E+
Sbjct: 315 SDPARQLKFAEGWLKDHPSDASLLLTLGRLCLQNSLWGKARDYLESSLQVQRNPEACAEL 374

Query: 361 FLLLAQIEQANSHNT 375
             LLAQ+      N 
Sbjct: 375 ARLLAQLGDTERSNQ 389


>gi|330965077|gb|EGH65337.1| hemY protein [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 415

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 145/389 (37%), Gaps = 20/389 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           ++ +  +++  +     V+ +   V I + N  Y +S +  L++L   L    +L  +  
Sbjct: 6   VLLFIAIVAAALIGVA-VAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILRLLIT 64

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
              +   ++     +    +   A+  G M +A      A++     ++     +  L Y
Sbjct: 65  LLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWASAQRHLQRAAEADA--HPLLYY 122

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALD 182
           +   + A  + +Y      LE  L+     E A+   + +  +  GD + A        +
Sbjct: 123 IGAARAANEQGRYEECDALLERALERQPQAELAIALNHAQLQQDRGDTDGALGTLQAMNE 182

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---------IARS 233
             P  P V   + + Y    +WS  I  L + +K+     +  A L          +A  
Sbjct: 183 RHPHNPQVLRQLQRLYQQRGDWSDLIRLLPELRKDKVLPPKELAELERRAWGENLTLAAY 242

Query: 234 LENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVN 290
            + +D+G    + S   A + L          + A A  L     + +AE +L    K +
Sbjct: 243 RDESDEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRAALKRD 302

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +  +A +Y  +   + + +L+ A    + +      L+ + +I L+     +A      
Sbjct: 303 YNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLES 362

Query: 351 AMKI----APRKEIFLLLAQIEQANSHNT 375
           ++++        E+  LLAQ+ + +  N 
Sbjct: 363 SLRLERNPETCAELARLLAQLGETDRSNA 391


>gi|262163676|ref|ZP_06031417.1| HemY-like protein [Vibrio mimicus VM223]
 gi|262027892|gb|EEY46556.1| HemY-like protein [Vibrio mimicus VM223]
          Length = 398

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 119/382 (31%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+ L +      +     V I+  NR    S   ++  +   L A   L  
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          +    +         AV        +    GD  +A    
Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALNTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+  +  P+   V   + Q Y    +W   +  L +  K  +  N     L +       
Sbjct: 176 TQLQNSHPNNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235

Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 KG      H A  S KL      +M  I     LI +    +A  ++++  K  
Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P  E+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|260774860|ref|ZP_05883762.1| HemY-like protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609285|gb|EEX35440.1| HemY-like protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 392

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/382 (13%), Positives = 124/382 (32%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R+I  F V+   + +    +     V I+  ++    S   ++  +   L A   L  
Sbjct: 1   MFRIIFLFVVLGAGLFAGTQYAGQQGYVLISVADKTIEMSVTTLVIFVIATLAALFGLEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L   +  ++    R   +  +    G++ +   +  LA K  +  +  H      
Sbjct: 61  LIKKTLYASSATWNYFSVRKMRRSRRYTNEGIIKLLEGDFKLAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          +    +         AV        +  R  +  +A    
Sbjct: 119 LCYLVASEAAQGLGDNEK-RDHYLKLASEQENALLAVELTR--AKQQVREANYTAAFETL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           ++     P+   V   +   Y+  K W   +  L+   K+       +A L         
Sbjct: 176 SQLKSSYPNNRIVLNLLKNVYIELKMWQPLLNTLSTLVKSKIITKDEQAQLTQRAQCGLL 235

Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           ++          I         LK   + +    C AK L+++    +A  ++++  K +
Sbjct: 236 EEVAEQKGSEGLIAHWNSLTRKLKSDTHLVE---CFAKQLMARKADSEAFTLVKENLKKH 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P  E+  +   +   +    +     + + +  +  +   +++  L   +  +A      
Sbjct: 293 PDSELYALLPDMNLADDHPVVVFLEDVLKKDGNNASAHSALAQFHLRNENWSEAQQHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSVRSSVSDYSYLADALEKQN 374


>gi|258623139|ref|ZP_05718151.1| hemY protein [Vibrio mimicus VM573]
 gi|258584622|gb|EEW09359.1| hemY protein [Vibrio mimicus VM573]
          Length = 398

 Score = 88.5 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 118/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+ L +      +     V I+  NR    S   ++  +   L A   L  
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          +    +         AV        +    GD  +A    
Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALNTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+  +  P    V   + Q Y    +W   +  L +  K  +  N     L +       
Sbjct: 176 TQLQNSHPHNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235

Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 KG      H A  S KL      +M  I     LI +    +A  ++++  K  
Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P  E+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|238798582|ref|ZP_04642058.1| hypothetical protein ymoll0001_37320 [Yersinia mollaretii ATCC
           43969]
 gi|238717538|gb|EEQ09378.1| hypothetical protein ymoll0001_37320 [Yersinia mollaretii ATCC
           43969]
          Length = 399

 Score = 88.5 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 119/365 (32%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L   L A++++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMLILVLVAFLIVEWILRRIFRTGARTRGWFMGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            +  +S  +  L      +   ++E +       I    +   +           +  + 
Sbjct: 199 RSGAYSSLLEILPAIGKVQLHTSEEISALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L S N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKAREAFTAALVQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|146313622|ref|YP_001178696.1| putative protoheme IX biogenesis protein [Enterobacter sp. 638]
 gi|145320498|gb|ABP62645.1| HemY protein [Enterobacter sp. 638]
          Length = 399

 Score = 88.5 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 110/376 (29%), Gaps = 14/376 (3%)

Query: 11  ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70
           I+ ++   + ++ +   V I   N    TS   ++ IL   + A   +  + R      A
Sbjct: 12  IAGIVLGPM-LAGHQGYVLIQTDNYNIETSVTGLVIILILTMVALFAIEWILRRIFRTGA 70

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI 129
                   R   +  K     L+ +A  +     K M              + YLL  + 
Sbjct: 71  HTRSWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMTKNADH---AEQPVVNYLLAAEA 127

Query: 130 ALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
           A        A++ LE    +                     G+ ++A+    + L+I+P 
Sbjct: 128 AQQRGDEMRANQHLERASELASNDQIPVEITR--VRLQLARGENHAARHGVDRLLEITPH 185

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P V     Q Y+    W   +  +    K     + +R  L     +   D+       
Sbjct: 186 HPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDALQRQAWIGLMDQARADLGS 245

Query: 247 H----DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                      +     +   +  A+ LI  +    A+ I+    K      +  +   L
Sbjct: 246 DGLKTWWKNQSRKTRQQVPLQVAMAEHLIECDDHDTAQAIILDGLKRQYDDRLVMVIPRL 305

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            + N     K   +  +   +       + +  ++ G   +A      A+K  P    + 
Sbjct: 306 KTNNPEQMEKMLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAFDYA 365

Query: 363 LLAQIEQANSHNTDKI 378
            LA          +  
Sbjct: 366 WLADSLDKQHKPEEAA 381


>gi|117621176|ref|YP_854999.1| HemY protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117562583|gb|ABK39531.1| HemY protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 387

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 118/370 (31%), Gaps = 21/370 (5%)

Query: 1   MLRLIRYFFVISLVICSFII---VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL 57
           M+RLI    +++ ++   I     S     V I+ GN    +S    + +   F  A ++
Sbjct: 1   MIRLIV---LVAAMVAGLIFGPQASGNKGYVLISLGNYTVESSVTSAVILAVLFYGALLI 57

Query: 58  LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
           +  +                 R   K  +      +++A  +   A K+   +       
Sbjct: 58  VEWLLGRVFGLRRKTLGWYGSRRRRKANQQTVAATLAMAEGHYSQAEKLM--LKGASNSD 115

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
              L YL   + A A        + L +   + P        +        G  ++A   
Sbjct: 116 TPLLNYLSAAKAAQARGDDVRRDQYLQKAQEENPKAELALTLTQTQLQIEQGQYDTALAM 175

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                 ++P  P V + + Q ++  ++W+  I  +    K  K   +    LL       
Sbjct: 176 LESVYALNPRHPMVLDQLRQVHLAREDWAALIDLIPVLHKVGKLTPKQEEDLLQQAWRGR 235

Query: 237 ADK--GDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D   G +        E    L+   + + A     + L + N+   A  +     +   
Sbjct: 236 LDAASGALETLRPIWQELPRKLRQDPDLLAAYGDRLRQLGADNE---AAELWLDALRKQV 292

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            P++      L  ++    L    +++    +       ++++ L  G +D A       
Sbjct: 293 SPQLLARLPKLKLDSYQPMLTLLQKIQ----DQPGVDAALAQVYLLAGQLDDAQRLLEQE 348

Query: 352 MKIAPRKEIF 361
           +  AP   ++
Sbjct: 349 VAKAPNAAVY 358


>gi|219871195|ref|YP_002475570.1| porphoryin biosynthesis protein HemY [Haemophilus parasuis SH0165]
 gi|219691399|gb|ACL32622.1| porphoryin biosynthesis protein HemY [Haemophilus parasuis SH0165]
          Length = 416

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/397 (13%), Positives = 125/397 (31%), Gaps = 30/397 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   +     +S +   V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLIVLAGLILGPYISGHQGYVRIETAGKVIEMSLVMLVVFFAVAMAVVYAIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R F       +     R   K  +    GLM +   +   A ++ +  ++        
Sbjct: 61  IFRRFFGLSRGAYQWFGDRKRKKAQQQTLEGLMKMTEGDYSKAERLIAKNAKHAA--EPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGDL 170
           L ++   + A        A++ L           + ++I  TR   +      +    D 
Sbjct: 119 LNFIKAAEAAQQRGDELNANKYLIEAAKIAGPNNVAVEIARTRILLLQGKLPAARSAVDS 178

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRA 226
                     L+++P+        ++ Y  +K +      L     +   +A+E+ R   
Sbjct: 179 L---------LELAPNNVEALRLAIEIYQKSKAYKALDDVLEQIGQRSFLSAEEYERLEQ 229

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +      E  ++                   SI   +   K LI  +  + A+ I  + 
Sbjct: 230 QVNDGLLDEIMNEEGQEGLLKWWDNQPSRRRRSIYVRVGLIKRLIDTDDHQSAQEIALET 289

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-----VIVSKIALEMGSI 341
            K     ++A +Y  L       + K    L + N ++ E        ++  I    G+ 
Sbjct: 290 VKKYQDEQLALLYPELTRLQVDEEHKLFKVLLKRNSKAEERYSDDYARVLGYIHTRAGNF 349

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           D+A    +  ++         ++A      +H+ +  
Sbjct: 350 DKAKPYFVQLLEHKECVAKDRIMALYVAEQTHDVELA 386


>gi|330876443|gb|EGH10592.1| hemY protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 415

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 144/389 (37%), Gaps = 20/389 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           ++ +  +++  +     V+ +   V I + N  Y +S +  L++L   L    +L  +  
Sbjct: 6   VLLFIAIVAAALIGVA-VAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILRLLIT 64

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
              +   ++     +    +   A+  G M +A      A++     ++     +  L Y
Sbjct: 65  LLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWASAQRHLQGAAEADA--HPLLYY 122

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALD 182
           +   + A  + +Y      LE  L+     E A+   + +  +  GD + A        +
Sbjct: 123 IGAARAANEQGRYEECDALLERALERQPQAELAIALNHAQLQQDRGDTDGALGTLQAMNE 182

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---------IARS 233
             P  P V   + + Y    +WS  I  L + +K+     +  A L          +A  
Sbjct: 183 RHPHNPQVLRQLQRLYQQRGDWSDLIRLLPELRKDKVLPPKELAELERRAWGENLTLAAY 242

Query: 234 LENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVN 290
            + +D+G    + S   A + L          + A A  L     + +AE +L    K +
Sbjct: 243 RDESDEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRAALKRD 302

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +  +A +Y  +   + + +L+ A    + +       + + +I L+     +A      
Sbjct: 303 YNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLSLSLGRICLQGRLWGKARDYLES 362

Query: 351 AMKI----APRKEIFLLLAQIEQANSHNT 375
           ++++        E+  LLAQ+ + +  N 
Sbjct: 363 SLRLERNPETCAELARLLAQLGETDRSNA 391


>gi|52842942|ref|YP_096741.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52630053|gb|AAU28794.1| protoheme IX synthesis HemY [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 395

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 126/383 (32%), Gaps = 51/383 (13%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F ++ L +   I ++  P  V I   N    T+ +V +  L+F  F    L  
Sbjct: 1   MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                   P M+     +R   K       GL+  +      A+  +  +          
Sbjct: 61  FCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177
           L YL   + A       +  +    E    +P  +             +    +  + A 
Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166

Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
               +AL        ++P  P+V + ++  Y   K+W + I  L   KKN          
Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKN---------H 217

Query: 228 LLIARSLENADKGDMIASYHDAIESL------KLCDNS-------IMASICAAKSLISQN 274
           ++  ++ E   K   + +  D  +        KL              +   A+ LI   
Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYARFLIRNQ 277

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
              +AE  L++  +      +  +Y+ L  E     L  A  L + N  S    + + ++
Sbjct: 278 DYDQAEYHLKRCLRKELDNRLIELYSLLPCEENQ--LLFAESLLKKNPHSAALYLCLGRM 335

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
            L      +A      ++++ P 
Sbjct: 336 CLSRHLWGKAKHYLEQSIELNPT 358


>gi|323495301|ref|ZP_08100382.1| heme biosynthesis protein [Vibrio brasiliensis LMG 20546]
 gi|323310478|gb|EGA63661.1| heme biosynthesis protein [Vibrio brasiliensis LMG 20546]
          Length = 395

 Score = 88.1 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 133/399 (33%), Gaps = 11/399 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RLI  F V+ L +      +     V I+  ++    S   ++  +   L A   L  
Sbjct: 1   MFRLIFLFVVLGLGLFVGTQYAGQQGYVLISIASKTIEMSVTTLVIFVIAALAALFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +      +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LVKKVFYASSATWNYFSVRKMRRSRRYTNEGIIKLLEGDFKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178
           L YL+  + A      +   ++   +       + AV  L     +I D   N A    T
Sbjct: 119 LCYLVASEAAQGMGD-DAQRDRYLELAAQQDNSQLAVE-LTRAKQQIRDAKYNEALETLT 176

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
                  +   V   + Q Y+  K W   +  L +  K+       +  L          
Sbjct: 177 SLKANYANNMIVLNLLKQVYIELKLWQPLLDLLPKLVKSNIVTKEEQEPLAQRAQCGLLA 236

Query: 239 KGDMIASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +          I         + A      C AK LI++    +A  ++++  K +P+ +
Sbjct: 237 EVAEQKGSEGLIAHWNALPRKVKADSHLVECFAKQLINRQADSEAFTLIKETLKKHPNSD 296

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +   L   ++   +     + + +  + ++   +++  L   +  +A      A+ +
Sbjct: 297 LYRLLPELKLSDSHPVVTFLEGVLKKDANNAQANSALAQFHLRNENWSRAQQHLEKALSV 356

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                 + LLA   +  +  T      ++ AL  + +P 
Sbjct: 357 RSNVSDYGLLADALEKQNL-TKAAHEVSKKALTLVSEPA 394


>gi|261365623|ref|ZP_05978506.1| HemY family protein [Neisseria mucosa ATCC 25996]
 gi|288565859|gb|EFC87419.1| HemY family protein [Neisseria mucosa ATCC 25996]
          Length = 407

 Score = 87.7 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/390 (13%), Positives = 130/390 (33%), Gaps = 21/390 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++ + +  V+       ++ S  Y  +V I  G  + R +    +  L  F+ A   L  
Sbjct: 1   MKAVVWIVVLFAAAVGIVLTSGVYTGNVYIVVGQVMMRVNLHAFILGLVLFVVALYFLIK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                ++ PA +      R   +   AL +  ++        A +  + V +      N 
Sbjct: 61  FIVGLMNIPARMQRFGTARKGRQAAVALNSAGLAFFEGRFEKAEQEAAKVLENKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A     + +    L+ + ++P  ++ + Y L  E +    D  +A     
Sbjct: 121 NLALMLGAHAADQMENFELRDHYLKDIEKLPNKQQLSRYLLLAESALGRRDYPTALENLN 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-------EWNRNRAILLIA 231
            A  I P+   +    ++      +    +    +  K          ++       L+A
Sbjct: 181 AAARIHPNLSRLARLQLRYAFDHGDAEDVLAKSEKLMKAGAINDFEAEQYQSWAYRRLLA 240

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            + + A     +    +A+++ +LC       +  A+         +A   +   +  N 
Sbjct: 241 EASDAARLKACLKRIPEALKADELC-------VAIAEKYERLGLYTEAVKWVRHYYPQNR 293

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSIDQAHAK 347
            PE+   +   +        ++A+ L +       +    L+ + ++A       +A + 
Sbjct: 294 RPELLEAFVESVRFFNERGQQKAIDLADSWLKDKPDDAPLLMYLGQLAYGRSLWGKAQSY 353

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
              ++ + P     L+LA++          
Sbjct: 354 LEASIALQPSIAARLMLARVLDETGQPQKA 383


>gi|145300739|ref|YP_001143580.1| HemY protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142853511|gb|ABO91832.1| HemY protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 387

 Score = 87.3 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 113/367 (30%), Gaps = 15/367 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI    V+   +      S     V I  GN    +S    + +   F  A +++  
Sbjct: 1   MIRLIVLVAVMIAGLMFGPEASGNKGYVLIALGNYTVESSVTSAVILAVLFYGALLVIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +                 R   K  +      +++A  +   A K+   +          
Sbjct: 61  LLGRVFGLRRKTLGWYGSRRRRKANQQTVAATLAMAEGHYSQAEKLM--LKGASNSDTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L YL   + A A        + L +   + P        +        G  ++A      
Sbjct: 119 LNYLSAAKAAQARGDDVRRDQYLQKAQEENPKAELALTLTQTQLQIEQGQYDTALAMLES 178

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENAD 238
              ++P  P V + + Q ++  ++W+  I  +    K  K    +   +L  A +     
Sbjct: 179 VYALNPRHPMVLDQLRQVHLAREDWAAIIDLIPVLHKVGKLTPKQEEDLLHRAWTGRLKA 238

Query: 239 KGDMIASYHDAIES----LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
             D + +     +     L+   + + A       L       +A  +     +    P+
Sbjct: 239 ASDALETLRPVWQGLPRKLRQDPDLLAA---YGDRLRELGADSEAAELWLDALRKQVSPQ 295

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +      L  E+    L    +++    +       ++++ L  G +DQA       +  
Sbjct: 296 LLARLPKLKLESYQPVLTLLQKIQ----DQPGVEAALAQVYLLAGQLDQAQRLLEQEVAK 351

Query: 355 APRKEIF 361
            P   ++
Sbjct: 352 TPSAAMY 358


>gi|54295576|ref|YP_127991.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila str. Lens]
 gi|53755408|emb|CAH16904.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila str. Lens]
          Length = 395

 Score = 87.3 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 59/387 (15%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F ++ L +   I ++  P  V I   N    T+ +V +  L+F  F    L  
Sbjct: 1   MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P M+     +R   K       GL+  +      A+  +  +          
Sbjct: 61  LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177
           L YL   + A       +  +    E    +P  +             +    +  + A 
Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166

Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
               +AL        ++P  P+V + ++  Y   K+W + I  L   KKN          
Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKN---------H 217

Query: 228 LLIARSLENADKGDMIASYHDAIESL------KLCDNS-------IMASICAAKSLISQN 274
           ++  ++ E   K   + +  D  +        KL              +   A+ LI   
Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYARFLIRNR 277

Query: 275 KKRKAE----VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              +AE      L K         +  +Y+ L  E     L  A  L + N  S    + 
Sbjct: 278 DYDQAEYHLRRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAGLHLC 331

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + ++ L      +A      ++++ P 
Sbjct: 332 LGRMCLSRHLWGKAKHYLEQSIELNPT 358


>gi|148358522|ref|YP_001249729.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila str. Corby]
 gi|296108390|ref|YP_003620091.1| HemY protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148280295|gb|ABQ54383.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila str. Corby]
 gi|295650292|gb|ADG26139.1| HemY protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 395

 Score = 86.9 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 59/387 (15%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F ++ L +   I ++  P  V I   N    T+ +V +  L+F  F    L  
Sbjct: 1   MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P M+     +R   K       GL+  +      A+  +  +          
Sbjct: 61  LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177
           L YL   + A       +  +    E    +P  +             +    +  + A 
Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166

Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
               +AL        ++P  P+V + ++  Y   K+W + I  L   KKN          
Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKN---------H 217

Query: 228 LLIARSLENADKGDMIASYHDAIESL------KLCDNS-------IMASICAAKSLISQN 274
           ++  ++ E   K   + +  D  +        KL              +   A+ LI   
Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYARFLIRNR 277

Query: 275 KKRKAE----VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              +AE      L K         +  +Y+ L  E     L  A  L + N  S    + 
Sbjct: 278 DYDQAEYHLRRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAALYLC 331

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + ++ L      +A      ++++ P 
Sbjct: 332 LGRMCLSRHLWGKAKHYLEQSIELNPT 358


>gi|167855155|ref|ZP_02477926.1| HemY-like protein [Haemophilus parasuis 29755]
 gi|167853700|gb|EDS24943.1| HemY-like protein [Haemophilus parasuis 29755]
          Length = 416

 Score = 86.9 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 52/397 (13%), Positives = 124/397 (31%), Gaps = 30/397 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   +     +S +   V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLIVLAGLILGPYISGHQGYVRIETAGKVIEMSLVMLVVFFAVAMAVVYAIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R F       +     R   K  +    GLM +   +   A ++ +  ++        
Sbjct: 61  IVRRFFGLSRGAYQWFGDRKRKKAQQQTLEGLMKMTEGDYSKAERLIAKNAKHAA--EPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGDL 170
           L ++   + A        A++ L           + ++I  TR   +      +    D 
Sbjct: 119 LNFIKAAEAAQQRGDELNANKYLIEAAKIAGPNNVAVEIARTRILLLQGKLPAARSAVDS 178

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRA 226
                     L+++P+        ++ Y  +K +      L     +   +A+E+ R   
Sbjct: 179 L---------LELAPNNVEALRLAIEIYQKSKAYKALDDVLEQIGQRSFLSAEEYERLEQ 229

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +      E  ++                   SI   +   K LI  +  + A+ I  + 
Sbjct: 230 QVNDGLLDEIMNEEGQEGLLKWWDNQPSRRRRSIYVRVGLIKRLIDTDDHQSAQEIALET 289

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-----VIVSKIALEMGSI 341
            K     ++A +Y  L       + K    L + N ++ E        ++  I    G  
Sbjct: 290 VKKYQDEQLALLYPELTRLQVDEEHKLFKVLLKRNSKAEERYSDDYARVLGYIHTRAGHF 349

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           D+A    +  ++         ++A      +H+ +  
Sbjct: 350 DKAKPYFVQLLEHKECVAKDRIMALYVAEQTHDVELA 386


>gi|307611616|emb|CBX01300.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila 130b]
          Length = 395

 Score = 86.9 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 59/387 (15%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F ++ L +   I ++  P  V I   N    T+ +V +  L+F  F    L  
Sbjct: 1   MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P M+     +R   K       GL+  +      A+  +  +          
Sbjct: 61  LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177
           L YL   + A       +  +    E    +P  +             +    +  + A 
Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166

Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
               +AL        ++P  P+V + ++  Y   K+W + IT L   KKN          
Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLITLLPDLKKN---------H 217

Query: 228 LLIARSLENADKGDMIASYHDAIESLK----------LCDNSIMASICAA---KSLISQN 274
           ++  ++ E   K   + +  D  +  +          L    +  +   A   + LI   
Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYTRFLIRNR 277

Query: 275 KKRKAE----VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              +AE      L K         +  +Y+ L  E     L  A  L + N  S    + 
Sbjct: 278 DYDQAEYHLRRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAALHLC 331

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + ++ L      +A      ++++ P 
Sbjct: 332 LGRMCLSRHLWGKAKHYLEQSIELNPT 358


>gi|332995108|gb|AEF05163.1| heme biosynthesis protein [Alteromonas sp. SN2]
          Length = 390

 Score = 86.5 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 136/383 (35%), Gaps = 10/383 (2%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61
           + L      I  +I   +I+      V I+ GN    TS      I+   + +W ++  +
Sbjct: 6   IALAVLAAFIVALIVGPMILGDK-GYVLISLGNTAIETSLIGFCIIIICAIISWYIISKL 64

Query: 62  SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
             + LS               K  +A Y GL S+AA ++  A   H  +SQ      E +
Sbjct: 65  VLWTLSLVTGSHRWFGALGERKRKRAFYHGLQSLAAGDLKSA---HKALSQTTNGDFEGV 121

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL   Q+A ++     A   L    +  + +  A   +       G    A        
Sbjct: 122 NYLAAAQVAQSQNDPQKARYFLLQAAEYDSAKVAATIVMARIDVSEGKYTDALEKLDSLD 181

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADK 239
           +   + P V +          +W      L+  +K    +++      +   +  E A K
Sbjct: 182 EEEANNPQVIQLKASIMAEQGQWQTLQEKLSGWRKALPKEDYTAWSQRIAKGKLAEIASK 241

Query: 240 GDMIASYHDAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
                         +    D++  A+    + L+ Q    +A+ +L +  K  PHP +  
Sbjct: 242 NGAAELKTHWEGLPRKIKQDDAYRAAYI--QQLLEQGMHAEAQTLLVEWQKRGPHPALFP 299

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +T L   N    L+      + + E+VE    + ++A   G    A    + A+K+   
Sbjct: 300 YFTQLNIPNAAPSLRLLESWIKQDSENVELYSTLGRVAFNAGDDILAEKVLLKAVKMESN 359

Query: 358 KEIFLLLAQIEQANSHNTDKILY 380
           K+  LLL+ I +    +T  + Y
Sbjct: 360 KDDLLLLSAISERRHDSTTALQY 382


>gi|156935873|ref|YP_001439789.1| putative protoheme IX biogenesis protein [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156534127|gb|ABU78953.1| hypothetical protein ESA_03756 [Cronobacter sakazakii ATCC BAA-894]
          Length = 398

 Score = 86.5 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 107/365 (29%), Gaps = 11/365 (3%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I        TS   +  IL   L     +  + R      A        R 
Sbjct: 21  VAGHQGYVLIQTDTWNIETSVTGLAIILILSLVVLFAIEWLLRRLFRTGARTRGWFAGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 81  RSRARKQTKLALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           + LE    +                      + ++A+    + L+I+P  P V     Q 
Sbjct: 139 QHLERAAELADNDQIPVEITR--VRLQLARNENHAARHGVDRLLEITPRHPEVLRLAEQA 196

Query: 198 YVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIA--RSLENADKGDMIASYHDAIESLK 254
           Y+    WS  +  +   +K    +     A+   A    ++ A              +  
Sbjct: 197 YIRTGAWSSLLDIIPSMQKAGVGDDEHRDALTRQAWIGLMDQARADQGSDGLKAWWRNQS 256

Query: 255 LCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                  A   A A+ LI  +  + A+ I+    K      +  +   L + N     K 
Sbjct: 257 RKTRHQPALQVAMAEHLIECDDHQTAQEIILDGLKRQYDDRLVLLMPRLKAGNPEQLEKA 316

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
             +  +   +       + ++ +  G   +A      A+K  P    +  LA +      
Sbjct: 317 LRQQIKTYGDRPLLWSTLGQLLMSHGEWKEASLAFRAALKQRPDAFDYAWLADVLDRLHQ 376

Query: 374 NTDKI 378
             +  
Sbjct: 377 PEEAA 381


>gi|217975051|ref|YP_002359802.1| HemY domain-containing protein [Shewanella baltica OS223]
 gi|217500186|gb|ACK48379.1| HemY domain protein [Shewanella baltica OS223]
          Length = 388

 Score = 86.5 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 135/403 (33%), Gaps = 32/403 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59
           M++++ +  ++ + +C    +      V I  G+    TS    +  L  F   + +L +
Sbjct: 1   MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60

Query: 60  AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117
            V         +       +R   K +  +  G +++A  + P A R M           
Sbjct: 61  LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPA 118

Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
              L      Q    IA  ++      A       +    TR          +    D  
Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGELTLARAELD-- 176

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228
              + A  +   +P         ++ Y   ++W  A+  L    +K++   +   N   +
Sbjct: 177 ---KLAPTSKSKAPVLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228

Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               +L  A       +     +    S +     +      A  L   N+K +A  ++ 
Sbjct: 229 ATNCALLKAAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           K  + +P   + +    + +       K+ L+ E  ++ + +  + ++K+  +   + +A
Sbjct: 286 KKLRTSPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +      ++ P K  +L LA+I++             + A++
Sbjct: 346 RSCLQNVCRLEPTKASWLALARIQE-QLGEQGNANQSYRQAVN 387


>gi|54298730|ref|YP_125099.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila str. Paris]
 gi|53752515|emb|CAH13947.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Legionella pneumophila str. Paris]
          Length = 395

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 122/378 (32%), Gaps = 41/378 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F ++ L +   I ++  P  V I   N    T+ +V    L+F  F    L  
Sbjct: 1   MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSAFGLFFLFFLIYGLVQ 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P M+     +R   K       GL+  +      A+  +  +          
Sbjct: 61  LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177
           L YL   + A       +  +    E    +P  +             +    +  + A 
Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166

Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNR 223
               +AL        ++P  P+V + ++  Y   K+W + I  L   KKN     + + +
Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKNHIISDQAFEQ 226

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE--- 280
            +    +   ++ A                K   N    +   A+ LI      +AE   
Sbjct: 227 LQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTMVNDTAITAEYARFLIRNQDYDQAEYHL 286

Query: 281 -VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              L K         +  +Y+ L  E     L  A  L + N  S    + + ++ L   
Sbjct: 287 RRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAALYLCLGRMCLSRH 340

Query: 340 SIDQAHAKAMLAMKIAPR 357
              +A      ++++ P 
Sbjct: 341 LWGKAKHYLEQSIELNPT 358


>gi|325266581|ref|ZP_08133258.1| HemY family protein [Kingella denitrificans ATCC 33394]
 gi|324982024|gb|EGC17659.1| HemY family protein [Kingella denitrificans ATCC 33394]
          Length = 400

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 140/400 (35%), Gaps = 19/400 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M +L+    + +L I   I    Y  +V +   + + R +  + +  L   + A  +L  
Sbjct: 1   MKQLLWIIILFALAIGVAIATRTYTGNVYLVIEHTMIRVNLHLFVLGLVASVVALYILVR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    LS P  L      R   K  ++L    ++        A+     V       ++ 
Sbjct: 61  LIAGILSTPDKLSRFGVGRRNRKATQSLNAAGLAYFEGKFQEAQAQADKVLANKEAGDKR 120

Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
           ++ L+    A  +     A ++    + ++P   + + + L  E +    +   A+ +  
Sbjct: 121 ILALMLAAHAADQSGNAEARDQYLHDIEKLPEKTQLSRHLLLAESAINQQNDEEAENHLK 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLEN 236
            A  I+P    +    ++  +       A+  L++  K + A   N N A  L  R+   
Sbjct: 181 AAAQINPRLTRLVRLQLRHALDKG---NALEILDKVDKLRRAGAMNDNEAEQLSERAYAQ 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKVNPHP 293
                  A+   A   LK   +S+ A   +A             KA   + + +  N   
Sbjct: 238 LLSLAQDAAGLKAC--LKRIPDSLKAGALSAAIAQKYAELGLYDKAVAWVNQYYPQNHRA 295

Query: 294 EIANIYT----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           ++ +++     +L        +  A      N    + L  +  +A       +A     
Sbjct: 296 DLLSVFVQSAQYLDEYGQQKAIDTADAWLRQNPNDPKLLAALGDLAYHRQLWGKAQGYLE 355

Query: 350 LAMKIAPRKEIFLLLAQI-EQANSHNTDKILYWTQSALHA 388
            ++++ P     L LA++ EQ+  HN  +     + AL A
Sbjct: 356 ASLRLEPTVHARLTLAKVFEQSQRHNDAQEQR--RLALSA 393


>gi|288550561|ref|ZP_05970917.2| HemY protein [Enterobacter cancerogenus ATCC 35316]
 gi|288314624|gb|EFC53562.1| HemY protein [Enterobacter cancerogenus ATCC 35316]
          Length = 401

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 113/381 (29%), Gaps = 24/381 (6%)

Query: 11  ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70
           I+ ++   + ++ +   V I   N    TS   ++ IL   +     +  + R      A
Sbjct: 14  IAGIVLGPM-LAGHQGYVLIQTDNYNVETSVTGLVIILILGVVVLFAVEWILRRIFRTGA 72

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI 129
                   R   +  K     L+ +A  +     K M              + YLL  + 
Sbjct: 73  HTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMSKNADH---AEQPVVNYLLAAEA 129

Query: 130 ALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           A        A++ LE   +        +  TR               + ++A+    + L
Sbjct: 130 AQQRGDEARANQHLERASELSPKDPIPVEITRV-------RLQLARNENHAARHGVDRLL 182

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNRNRAILLIARSLENADK 239
           +I+P  P V     Q Y+    W   +  +    K     + +R+    L    L +  +
Sbjct: 183 EITPRHPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDELQRLAWIGLMDQAR 242

Query: 240 GD--MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            D              +     I   +  A+ LI  +    A+ IL    K      +  
Sbjct: 243 ADLGSDGLKTWWKNQSRKTRQQIPLQVAMAEHLIECDDHDTAQEILLDGLKRQYDDRLVM 302

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   L + N     K   +  +   +       + +  ++ G   +A      A+K  P 
Sbjct: 303 VIPRLRTNNPEQIEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD 362

Query: 358 KEIFLLLAQIEQANSHNTDKI 378
              +  LA          +  
Sbjct: 363 AFDYAWLADSLDKQHKPEEAA 383


>gi|254515496|ref|ZP_05127556.1| HemY domain protein [gamma proteobacterium NOR5-3]
 gi|219675218|gb|EED31584.1| HemY domain protein [gamma proteobacterium NOR5-3]
          Length = 414

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 131/390 (33%), Gaps = 26/390 (6%)

Query: 6   RYFFVISLVICSFIIVS---HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVS 62
            +   +  ++    IV+     P  + I +G     TS +V + ++   +          
Sbjct: 4   LFVIALLALVAGVGIVALIETEPGYLLIAYGGYTVETSFWVGILLIATVVLLLYASLRFL 63

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
              ++ PA + +   +R   +  +    GL++    N   +RK    +       +  L 
Sbjct: 64  HRLITSPANVLNWAGERRLRQSARLTSRGLINFVEGNWAQSRK--QLLRGARYSESPLLN 121

Query: 123 YLLEVQIA------LAERQY--NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           YL+  + +       A R++    A   +E ++ +  T+                   A 
Sbjct: 122 YLMSARASYRLQEPEAMRRHLVQAAESDIEAIIAVDLTQA-------ELQLNDRQYEKAL 174

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLI 230
           +    A       P V   + + Y    +    +  L   +K+    A E ++  A +  
Sbjct: 175 KTLEGAKKTPGKHPQVLHLLCKAYDGLGDIEAMLALLPALRKHRVGGALELDKLEARIHH 234

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
               + A  GD         +  K   +     +    SL+  ++    E  +E+  K +
Sbjct: 235 DLLEQAAVTGDAALLMARWKKYPKRLVDDEAVQLHYLSSLLQCDETSTVEREIERRLKKH 294

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             P + ++Y  +  ++   +L  A      + +  E L+ + ++A+      +A      
Sbjct: 295 WQPALVSLYGRIPRQSAQKQLATAEVWLRQHSDDPELLLCLGRLAMVERQWAKARDFLER 354

Query: 351 AMKIAPRKEIFLLLAQI--EQANSHNTDKI 378
           +    P +E  L L ++     +     ++
Sbjct: 355 SHAARPSEEACLELGRLLTAVGDHATAAEV 384


>gi|304412543|ref|ZP_07394149.1| HemY domain protein [Shewanella baltica OS183]
 gi|307307202|ref|ZP_07586940.1| HemY domain protein [Shewanella baltica BA175]
 gi|304349185|gb|EFM13597.1| HemY domain protein [Shewanella baltica OS183]
 gi|306910441|gb|EFN40872.1| HemY domain protein [Shewanella baltica BA175]
          Length = 388

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 135/403 (33%), Gaps = 32/403 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59
           M++++ +  ++ + +C    +      V I  G+    TS    +  L  F   + +L +
Sbjct: 1   MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60

Query: 60  AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117
            V         +       +R   K +  +  G +++A  + P A R M           
Sbjct: 61  LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMVKGADNGELPA 118

Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
              L      Q    IA  ++      A       +    TR          +    D  
Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGELALARTELD-- 176

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228
              + A  +   +P         ++ Y   ++W  A+  L    +K++   +   N   +
Sbjct: 177 ---KLAPTSKSKAPVLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228

Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               +L  A       +     +    S +     +      A  L   N+K +A  ++ 
Sbjct: 229 ATNCALLKAAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           K  + +P   + +    + +       K+ L+ E  ++ + +  + ++K+  +   + +A
Sbjct: 286 KKLRTSPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +      ++ P K  +L LA+I++             + A++
Sbjct: 346 RSCLQNVCRLEPTKNSWLALARIQE-QLGEQGHANQSYRQAVN 387


>gi|114321814|ref|YP_743497.1| HemY domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228208|gb|ABI58007.1| HemY domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 435

 Score = 85.8 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/380 (13%), Positives = 129/380 (33%), Gaps = 25/380 (6%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
            +  +   + ++       TS    +  +   L    +L+ +    +  P +L H   +R
Sbjct: 20  WLQPHTGYLVLSVAGWRIETSLIFAVLAVAVVLVVLQVLWVLLDRTVGLPKVLSHWSTRR 79

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             +K    +  GL+++A       R+    + +     +  L+  L   +    R     
Sbjct: 80  RKEKARGEMAKGLLALAEGRY---RRGEDLLLKHVERSDYPLINYLGAALCAQRRHATET 136

Query: 140 HEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
            +    + +    R         ++      G    A    T A + +P+     E +  
Sbjct: 137 RDSYLALAE-QTARGSGSAVNLLQAQLYMESGQWEQALASLTSAYERNPNHHRTLEMMRD 195

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK------GDMIASYHDAI 250
             V  ++W R    L   +K     +          + +   +      GD+ +++    
Sbjct: 196 CCVALEDWERLGRLLKPLRKQGIIGSEEAEEYARYVARDKIRRAARIGLGDLESAWSRLP 255

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----KIWKVNPHPEIANIYTHLLSEN 306
            + +  D+ +   +  A++L+  ++  +A V+L+    + W       +   +  L   +
Sbjct: 256 RAQRNDDDLV---LTHAEALLELDEIDRAAVVLKGRIDETWDER----LIMRFGALEQID 308

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              +L++  R      ++   L +  ++AL +   D A      A+    R E+++ L  
Sbjct: 309 PEWQLQQLKRWLRQQPDNAALLYVAGRVALRLHDWDLAREYLEQALARRARPEVYMALGA 368

Query: 367 IEQANSHNTDKILYWTQSAL 386
           + +      D      + AL
Sbjct: 369 LLEFQERPDD-ARELYRKAL 387


>gi|56476044|ref|YP_157633.1| putative protein porphyrin biosynthesis [Aromatoleum aromaticum
           EbN1]
 gi|56312087|emb|CAI06732.1| putative protein porphyrin biosynthesis [Aromatoleum aromaticum
           EbN1]
          Length = 392

 Score = 85.8 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/410 (13%), Positives = 126/410 (30%), Gaps = 59/410 (14%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +   +  +     +++      V +       + S  +++  L    F   ++  
Sbjct: 1   MRTLLWLIALFALAAGVAMLASVNTGYVLVVLPPWRAQLSLNLLIVALLATFFIGYVVLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV---------- 110
           +    ++ P  +     +R  DK  +AL  GL ++       A K+              
Sbjct: 61  LVGKTIALPGRVGVFRERRRKDKAGRALREGLRALFEGRFAQALKLSGKAFDAGESRSMA 120

Query: 111 -----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
                   H  H++    +   + A  E +  +A    E  L I   R          + 
Sbjct: 121 ALVAARAAHGMHDDTRYRIWIGRAAEQEEEVRVARLMTEAELAIEGRRFE------EAAE 174

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+ +L  +      AL +S          ++       W   +    Q +K+        
Sbjct: 175 RLENLRLSGHRHIAALRLS----------LKVASALGHWEEVLRLARQLRKHKA------ 218

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKAE--- 280
             L   ++     +  +      A +   L     SI A+    + ++ +     A    
Sbjct: 219 --LTDEQAQPVVRRAHVERIRELARDGEALAAYWRSIPAAELGDRHMVEEAVPYLAAAGQ 276

Query: 281 ---------VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
                     +L+  W       +A +Y    + +  G L R       + +  + L  +
Sbjct: 277 GALVRKTVERMLDTEWDGG----LARLYAQCANGDAAGCLARGEGWLRKHPKDADLLYAL 332

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI-EQANSHNTDKILY 380
            ++ L      +A +    ++ +AP  E  L LA + E+          Y
Sbjct: 333 GRLCLAAQLWGKAQSYLEASLNLAPTIETHLALAHLFERLERAEEAHTHY 382


>gi|262404854|ref|ZP_06081408.1| HemY-like protein [Vibrio sp. RC586]
 gi|262348938|gb|EEY98077.1| HemY-like protein [Vibrio sp. RC586]
          Length = 398

 Score = 85.8 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+ L +      +     V I+  NR    S   ++  +   L A   L  
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LVKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          +    +         AV        +    GD  +A    
Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALSTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+  +  P    V   + Q Y    +W   +  L +  K  +  N     L +       
Sbjct: 176 TQLQNSYPHNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235

Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 KG      H A  S KL      +M  I     LI +    +A  ++++  K  
Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P  E+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 PTAELYALLPELNITDRHPLIALLEEALRRDSHNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|283834565|ref|ZP_06354306.1| HemY protein [Citrobacter youngae ATCC 29220]
 gi|291069695|gb|EFE07804.1| HemY protein [Citrobacter youngae ATCC 29220]
          Length = 400

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 107/365 (29%), Gaps = 11/365 (3%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   +     +  + R      A        R 
Sbjct: 22  MAGHQGYVLIQTDNYNIETSVTGLVIILIVAMVILFAIEWLLRRIFRTGAHTRGWFVGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           + LE    +                      + ++A+    K L+++P  P V     Q 
Sbjct: 140 QHLERAAELAGNDTIPVEIAR--VRLQLARNENHAARHSVDKLLEVTPRHPEVLRLAEQA 197

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESL 253
           Y+    WS  +  +    K       +RA+L     +   D+                  
Sbjct: 198 YIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWVGLMDQVRADQGSEGLRAWWKNQN 257

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +   + +   +  A+ LI  +    A+ ++    K      +      L + N     K 
Sbjct: 258 RKTRHQVALQVAMAEHLIECDDHDTAQQVIIDGLKRQYDDRLVLPIPRLKTNNPEQIEKV 317

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
             +  +   +       + +  ++ G   +A      A+K  P    +  LA        
Sbjct: 318 LRQQIKAVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADALDRLHQ 377

Query: 374 NTDKI 378
             +  
Sbjct: 378 PEEAA 382


>gi|253690344|ref|YP_003019534.1| HemY protein [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756922|gb|ACT14998.1| HemY protein [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 399

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 119/365 (32%), Gaps = 9/365 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I   N   +TS   ++ +L  F  A++ +  V R      A        R 
Sbjct: 23  VAGHQGYVLIQTDNYDIQTSVTGLVIMLVLFFLAFLAVEWVLRRIFRTGARTRGWFLGRK 82

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A          
Sbjct: 83  RTRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 140

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +         + ++A+    K L+++P  P V     Q ++
Sbjct: 141 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 200

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254
               +S  +  L   +K    +   R + L  ++      +    G             +
Sbjct: 201 RTHAYSALLDILPAMRKINL-YPEARLLDLQQQAYIGLMNQAMADGGSEGLKSWWNNQSR 259

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I   +  A+ LI  +    A+ I+    K      +  +   L + N     K  
Sbjct: 260 KVRHEIPLQVAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKVL 319

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            +  + +  +      + ++ ++ G   QA      A+++ P    +   A   +     
Sbjct: 320 HQYTKQHGTTPLLSSTLGQLLMKHGEWQQASDAFRAALELRPDAYDYAWRADALERLHLP 379

Query: 375 TDKIL 379
            +   
Sbjct: 380 DEAAQ 384


>gi|332284593|ref|YP_004416504.1| hypothetical protein PT7_1340 [Pusillimonas sp. T7-7]
 gi|330428546|gb|AEC19880.1| hypothetical protein PT7_1340 [Pusillimonas sp. T7-7]
          Length = 511

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 67/501 (13%), Positives = 146/501 (29%), Gaps = 83/501 (16%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +  +V I         S  + + ++         L  V  +    P        +R+  
Sbjct: 23  EHSGNVLIVAQPWRVELSLTLAVLLILASFVILYCLLRVLAWIGVRPERFRSWRSQRSQK 82

Query: 83  KGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
           + ++ L  G +++     P A K +   +++  +   + L  L   + +    +Y     
Sbjct: 83  REHELLENGWINVLEGRYPDAEKDLSKLLTRSKSKSRKVLAGLASARASQHMGEY----- 137

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV----------- 190
                                     G  + A   A +    +P                
Sbjct: 138 --------------------------GRRDEALTLARQNAQDNPRLSEATAIVAAEMYLD 171

Query: 191 ----TEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNR---------NRAILLIARSL 234
                +A+V           +  A   L +  +  +  +R          R +L  + ++
Sbjct: 172 QNRPQDALVLLQPLQDATTRYFHATRLLLRAHRQLRNHDRVFELTRLLSRRGVLEKSEAV 231

Query: 235 ENADKGDMIASYHDAIESLK-----LCDN---SIMASICAAKSLISQNKKRKAEVILEKI 286
           +  +           +E  K     L  +       ++ AA    +Q    +A  ILE  
Sbjct: 232 QLIETSAAARLRAGGVEGFKSIWSDLKSDERALPDVALAAADIQTAQGNIDEASKILETG 291

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                 P + N Y+    E+   +L +A    + + +    L  +  + L      Q   
Sbjct: 292 ISARLDPRLLNAYSQCPPEHVARRLSKAEDWLKTHPDDSALLAALGNLCLTGQLWGQGER 351

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406
             + +MKI     I  LL  +        D + +W  ++  A          G      L
Sbjct: 352 YLLRSMKIRSDMRIHALLGNLYDRLGRPNDAMTHWRLASGVA----------GV-----L 396

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
           P+ P S++L   + +      +          L          +       + + + + V
Sbjct: 397 PVLPSSRSLPAADTRGDPTLVDVERLPPEAQVLRDMQVPLAASAADFVNDDDFVSAGQPV 456

Query: 467 SSFED-STIHPLDPHIRQPDD 486
           +      ++ P  P ++QP D
Sbjct: 457 AGPAGADSVAPATPAVQQPID 477


>gi|311281519|ref|YP_003943750.1| HemY protein [Enterobacter cloacae SCF1]
 gi|308750714|gb|ADO50466.1| HemY protein [Enterobacter cloacae SCF1]
          Length = 398

 Score = 85.0 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  ++   +     +  V R  L   A        R 
Sbjct: 21  IAGHQGYVLIQTDTYNIETSVTGLAIVMILAMAVLFAIEWVLRRLLRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE         ++ +  TR               + ++A+    K L+I+P  P V  
Sbjct: 139 QHLERAAEIAGNDLIPVEITRV-------RLQLARNENHAARHGVDKLLEIAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD----MIASYHD 248
              Q Y     WS  I  +    K     +  RA L     +   D+           + 
Sbjct: 192 LAEQAYTRTGAWSSLIDIIPSMGKANVVDDAQRAALEQQAWIGLMDQAQANDGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K +    +      L + N  
Sbjct: 252 WKNQSRKTRHDVALQVAMAEHLIECDDHDTAQQIVIDGLKRHYDDRLLAPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQLKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAFDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRQHQPEEAA 381


>gi|261210175|ref|ZP_05924472.1| HemY-like protein [Vibrio sp. RC341]
 gi|260840715|gb|EEX67264.1| HemY-like protein [Vibrio sp. RC341]
          Length = 398

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 120/385 (31%), Gaps = 24/385 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+ L +      +     V I+  NR    S   ++  +   L A   L  
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LVKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          +    +         AV        +    GD  +A    
Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAQQDNATLAVELTR--AKQQLSDGDNTAALTTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+  +  P    V   + Q Y    EW   +  L +  K  +  N     L +       
Sbjct: 176 TQLQNSHPHNTVVLSLLNQCYQALGEWQPLLDLLPKLVKAKRLSNEEAQQLELTAQRGML 235

Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 KG      H A  S KL      +M  I     LI +    +A  ++++  K  
Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFI---NQLIERKADYEAFSVIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAK 347
           P    A +Y  L   N   +      LE     +  + E+   + ++ L       A   
Sbjct: 293 PT---AELYALLPELNIPDRHPLIAVLEDALRRDSNNAEAHSALGQLYLREKHWADAQKH 349

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANS 372
              A+ +      +  LA   +  +
Sbjct: 350 LEKALSLRSSVSDYAYLADALEKQN 374


>gi|284923905|emb|CBG37004.1| Porphyrin biosynthetic protein [Escherichia coli 042]
          Length = 398

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R               R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGTHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|262172876|ref|ZP_06040554.1| HemY-like protein [Vibrio mimicus MB-451]
 gi|261893952|gb|EEY39938.1| HemY-like protein [Vibrio mimicus MB-451]
          Length = 398

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 118/382 (30%), Gaps = 18/382 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+ L +      +     V I+  NR    S   ++  +   L A   L  
Sbjct: 1   MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V +  L      ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          +    +         AV        +    GD  +A    
Sbjct: 119 LCYLVASEAANGMGDLAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALNTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           T+  +  P    V   + Q Y    +W   +  L +  K  +  N     L +       
Sbjct: 176 TQLQNSHPHNTVVLNLLKQCYQALSQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235

Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 KG      H A  S KL      +M  I     LI +    +A  ++++  K  
Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P  E+  +   L   +    +         +  + E+   + ++ L       A      
Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A+ +      +  LA   +  +
Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374


>gi|254039013|ref|ZP_04873064.1| HemY protein [Escherichia sp. 1_1_43]
 gi|226838704|gb|EEH70732.1| HemY protein [Escherichia sp. 1_1_43]
          Length = 398

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QYLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|293393885|ref|ZP_06638192.1| porphoryin biosynthesis protein HemY [Serratia odorifera DSM 4582]
 gi|291423712|gb|EFE96934.1| porphoryin biosynthesis protein HemY [Serratia odorifera DSM 4582]
          Length = 397

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/364 (13%), Positives = 112/364 (30%), Gaps = 7/364 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  +        +++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNIETSVTGLAIMGILLFVVLLVIEWILRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RSRARKQTKAALIKLAEGDYKQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDDFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   +   T +  V  +        G+ ++A+    + L+ +P  P V     Q Y+
Sbjct: 139 QYLERAAEAADTDQLPVDITRVRIQLAQGEAHAARHGVDRLLNQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
               ++  +  L         + ++    +    I    +               +  + 
Sbjct: 199 RTGGYASLLEILPSMSKINLHSEEQLQALQQQAYIGLMNQAMADEGSEGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             + +   I   + LI  N    A+ I+    K      +  +   + S N     K   
Sbjct: 259 TRHEVPLQIAMVEHLIECNDHDMAQEIVIDSLKRQYDERLVLLIPRIKSGNAQQLEKALR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ ++ G   QA      A+K  P    +  LA + +    + 
Sbjct: 319 QQIKQHGATPLLNSTLGQLLIKHGEWQQASDAFREALKQRPDAYDYAWLADVLEKLHRSE 378

Query: 376 DKIL 379
           +   
Sbjct: 379 EAAQ 382


>gi|319779682|ref|YP_004130595.1| HemY-like protein [Taylorella equigenitalis MCE9]
 gi|317109706|gb|ADU92452.1| HemY-like protein [Taylorella equigenitalis MCE9]
          Length = 444

 Score = 84.6 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 130/395 (32%), Gaps = 14/395 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +++LI +F +   ++  F       + V +  GN     S    +  L        LLF 
Sbjct: 4   LIKLIIFFGLAIGLVLIFK---DNNDVVMLVTGNERRTVSLLTAVVFLLVAFLTLYLLFR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNE 119
           +  + LS P  +     +R++ K    L  G + +       A K    ++    +   +
Sbjct: 61  ILSWILSRPKAVADWSEERHHKKDIILLERGWVDLLEGRHYDAEKNFLKLTHHTKSTDRQ 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLE--MMLQIPATRE----FAVYS-LYFESCRIGDLNS 172
            L  +   +   A   Y    + L+   +L     +      AV + L  E    G  ++
Sbjct: 121 ILANIGAARAVHAIGDYARRDDLLKDARLLSKNNPKLDAAVVAVQADLLIE---QGQAHN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A  Y   A  +      +   +++ Y    + ++ +       +           LL   
Sbjct: 178 ALMYLEYADSVDGRQLHIKHQLLRAYEQTDQETKLLDTARFLFRKKSISKEEYMDLLDEF 237

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             +   +     + +      K        ++  ++      +  K+   LE        
Sbjct: 238 GPKFISRSKYDGAVNFYNSLSKEEKQLENIALAISRRFDQLEEYSKSSQALETSLNAKLS 297

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           P +   Y          +L +A +    +  + + L+ + ++ L      QA      ++
Sbjct: 298 PSVLAYYARAHESVANERLHKAQKWLNADANNPDLLLAIGQLCLANSLWGQAEKYLNQSL 357

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           KI   ++I  LL  +      ++  + +W +++L 
Sbjct: 358 KIKDNEKIHALLGVLYDKQGEHSKALSHWRKASLS 392


>gi|126176190|ref|YP_001052339.1| HemY domain-containing protein [Shewanella baltica OS155]
 gi|125999395|gb|ABN63470.1| HemY domain protein [Shewanella baltica OS155]
          Length = 388

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 130/396 (32%), Gaps = 32/396 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59
           M++++ +  ++ + +C    +      V I  G+    TS    +  L  F   + +L +
Sbjct: 1   MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60

Query: 60  AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117
            V         +       +R   K +  +  G +++A  + P A R M           
Sbjct: 61  LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPA 118

Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
              L      Q    IA  ++      A       +    TR          +    D  
Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGKLALARAELD-- 176

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228
              + A  +   +P         ++ Y   ++W  A+  L    +K++   +   N   +
Sbjct: 177 ---KLAPTSKSKAPLLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228

Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               +L          +     +    S +     +      A  L   N+K +A  ++ 
Sbjct: 229 ATNCALLKGAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           K  + +P   + +    + +       K+ L+ E  ++ + +  + ++K+  +   + +A
Sbjct: 286 KKLRTSPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            +      ++ P K  +L LA+I++           
Sbjct: 346 RSCLQNVCRLEPTKNSWLALARIQE-QLGEQGHANQ 380


>gi|153002484|ref|YP_001368165.1| HemY domain-containing protein [Shewanella baltica OS185]
 gi|151367102|gb|ABS10102.1| HemY domain protein [Shewanella baltica OS185]
          Length = 388

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 134/403 (33%), Gaps = 32/403 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59
           M++++ +  ++ + +C    +      V I  G+    TS    +  L  F   + +L +
Sbjct: 1   MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60

Query: 60  AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117
            V         +       +R   K +  +  G +++A  + P A R M           
Sbjct: 61  LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPA 118

Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
              L      Q    IA  ++      A       +    TR          +    D  
Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGELALARTELD-- 176

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228
              + A  +   +P         ++ Y   ++W  A+  L    +K++   +   N   +
Sbjct: 177 ---KLAPTSKSKAPVLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228

Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               +L  A       +     +    S +     +      A  L   N+K +A  ++ 
Sbjct: 229 ATNCALLKAAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           K  +  P   + +    + +       K+ L+ E  ++ + +  + ++K+  +   + +A
Sbjct: 286 KKLRTAPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +      ++ P K  +L LA+I++             + A++
Sbjct: 346 RSCLQNVCRLEPTKASWLALARIQE-QLGEQANANQSYRQAVN 387


>gi|237727918|ref|ZP_04558399.1| HemY [Citrobacter sp. 30_2]
 gi|226910367|gb|EEH96285.1| HemY [Citrobacter sp. 30_2]
          Length = 399

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 108/365 (29%), Gaps = 11/365 (3%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLVIILIVAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           + LE    +                      + ++A+    K L+++P  P V     Q 
Sbjct: 139 QHLERAAELAGNDTIPVEIAR--VRLQLARNENHAARHSVDKLLEVTPRHPEVLRLAEQA 196

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESL 253
           Y+    WS  +  +    K     + +RA+L     +   D+                  
Sbjct: 197 YIRTGAWSSLLDIIPSMAKARVGDDEHRAMLEQQAWVGLMDQVRADQGSEGLRAWWKNQS 256

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +   + +   +  A+ LI  +    A+ ++    K      +      L + N     K 
Sbjct: 257 RKTRHQVALQVAMAEHLIECDDHDTAQQVIIDGLKRQYDDRLVLPIPRLKTNNPEQIEKV 316

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
             +  +   +       + +  ++ G   +A      A+K  P    +  LA        
Sbjct: 317 LRQQIKAVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADALDRLHQ 376

Query: 374 NTDKI 378
             +  
Sbjct: 377 PEEAA 381


>gi|170022175|ref|YP_001727129.1| putative protoheme IX biogenesis protein [Escherichia coli ATCC
           8739]
 gi|188492123|ref|ZP_02999393.1| HemY protein [Escherichia coli 53638]
 gi|194434057|ref|ZP_03066327.1| HemY protein [Shigella dysenteriae 1012]
 gi|312971916|ref|ZP_07786090.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|169757103|gb|ACA79802.1| HemY protein [Escherichia coli ATCC 8739]
 gi|188487322|gb|EDU62425.1| HemY protein [Escherichia coli 53638]
 gi|194417715|gb|EDX33814.1| HemY protein [Shigella dysenteriae 1012]
 gi|309704237|emb|CBJ03585.1| Porphyrin biosynthetic protein [Escherichia coli ETEC H10407]
 gi|310334293|gb|EFQ00498.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|320178093|gb|EFW53073.1| putative protoheme IX biogenesis protein [Shigella boydii ATCC
           9905]
 gi|323934190|gb|EGB30621.1| hemY protein [Escherichia coli E1520]
 gi|332084958|gb|EGI90140.1| tetratricopeptide repeat family protein [Shigella dysenteriae
           155-74]
 gi|332345780|gb|AEE59114.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 398

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|22124293|ref|NP_667716.1| putative protoheme IX biogenesis protein [Yersinia pestis KIM 10]
 gi|45442946|ref|NP_994485.1| putative protoheme IX biogenesis protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108806167|ref|YP_650083.1| putative protoheme IX biogenesis protein [Yersinia pestis Antiqua]
 gi|108810277|ref|YP_646044.1| putative protoheme IX biogenesis protein [Yersinia pestis Nepal516]
 gi|145600720|ref|YP_001164796.1| putative protoheme IX biogenesis protein [Yersinia pestis Pestoides
           F]
 gi|153997092|ref|ZP_02022225.1| putative protoheme IX biogenesis protein [Yersinia pestis
           CA88-4125]
 gi|162421056|ref|YP_001605126.1| putative protoheme IX biogenesis protein [Yersinia pestis Angola]
 gi|165926307|ref|ZP_02222139.1| hemY protein [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165939155|ref|ZP_02227706.1| hemY protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011693|ref|ZP_02232591.1| hemY protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213543|ref|ZP_02239578.1| hemY protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401885|ref|ZP_02307373.1| hemY protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421107|ref|ZP_02312860.1| hemY protein [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426282|ref|ZP_02318035.1| hemY protein [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|218930855|ref|YP_002348730.1| putative protoheme IX biogenesis protein [Yersinia pestis CO92]
 gi|229837185|ref|ZP_04457350.1| predicted protoheme IX synthesis protein [Yersinia pestis Pestoides
           A]
 gi|229839545|ref|ZP_04459704.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229900108|ref|ZP_04515245.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900446|ref|ZP_04515575.1| predicted protoheme IX synthesis protein [Yersinia pestis Nepal516]
 gi|270488801|ref|ZP_06205875.1| HemY protein [Yersinia pestis KIM D27]
 gi|294505515|ref|YP_003569577.1| putative protoheme IX biogenesis protein [Yersinia pestis Z176003]
 gi|21957064|gb|AAM83967.1|AE013638_5 hemY protein [Yersinia pestis KIM 10]
 gi|45437813|gb|AAS63362.1| putative protoheme IX biogenesis protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108773925|gb|ABG16444.1| protoheme IX biogenesis protein [Yersinia pestis Nepal516]
 gi|108778080|gb|ABG12138.1| putative protoheme IX biogenesis protein [Yersinia pestis Antiqua]
 gi|115349466|emb|CAL22439.1| putative protoheme IX biogenesis protein [Yersinia pestis CO92]
 gi|145212416|gb|ABP41823.1| protoheme IX biogenesis protein [Yersinia pestis Pestoides F]
 gi|149289398|gb|EDM39476.1| putative protoheme IX biogenesis protein [Yersinia pestis
           CA88-4125]
 gi|162353871|gb|ABX87819.1| hemY protein [Yersinia pestis Angola]
 gi|165912928|gb|EDR31554.1| hemY protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921831|gb|EDR39028.1| hemY protein [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165989462|gb|EDR41763.1| hemY protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205216|gb|EDR49696.1| hemY protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961236|gb|EDR57257.1| hemY protein [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048778|gb|EDR60186.1| hemY protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054801|gb|EDR64605.1| hemY protein [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229682465|gb|EEO78552.1| predicted protoheme IX synthesis protein [Yersinia pestis Nepal516]
 gi|229686888|gb|EEO78967.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229695911|gb|EEO85958.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706128|gb|EEO92137.1| predicted protoheme IX synthesis protein [Yersinia pestis Pestoides
           A]
 gi|262363581|gb|ACY60302.1| putative protoheme IX biogenesis protein [Yersinia pestis D106004]
 gi|262367509|gb|ACY64066.1| putative protoheme IX biogenesis protein [Yersinia pestis D182038]
 gi|270337305|gb|EFA48082.1| HemY protein [Yersinia pestis KIM D27]
 gi|294355974|gb|ADE66315.1| putative protoheme IX biogenesis protein [Yersinia pestis Z176003]
 gi|320013547|gb|ADV97118.1| putative protoheme IX synthesis protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 406

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 114/365 (31%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  +L   L A+ ++  V R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVTTSVTGLAIMLVLLLVAFFIVEWVLRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +    +   L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARNQMKAALIKLAEGDFLQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++    +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADGDQLPVNITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESLKL 255
            +  +   +  L    K         A L     +   ++               +  + 
Sbjct: 199 RSGAYRSLLDILPAMSKTQIHTPEEVAALEQQAYIGIMNQCMADEGSEGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +A +   L + N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQKIILDSLKHQYDERLALLIPRLKAGNPEPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|269961543|ref|ZP_06175906.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833772|gb|EEZ87868.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 393

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 122/383 (31%), Gaps = 20/383 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N     S   ++  +   L A   L  
Sbjct: 1   MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFVIAALAALFFLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LVKKLVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       ++   +         AV        +  R  +  SA    
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRDNEFESAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             AL        +   +++  Y+  K W   I  + Q  K        +A L+       
Sbjct: 176 Q-ALKDQYANNSIVLNLLKTTYMQLKLWQPLIDLMPQLSKAKLVTEEEQAELIQKAQCGL 234

Query: 237 ADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             +          I         +K   + I    C A  LIS+     A  ++++  K 
Sbjct: 235 LHEVAQQQGSEGLISHWNGLPRKVKQDAHLI---GCFAHELISRKADNDAFTVIKEALKK 291

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +P PE+  +   L   ++   +     + +   E+  +   ++          +A     
Sbjct: 292 SPTPELYQLLPELNLPDSHPVIVFLEGVLKREPENAAAQSALAHFFFRQEKWQEAQEHFE 351

Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372
           +A+K+      +  LA   +  +
Sbjct: 352 VALKLRSDVSDYAYLADTLEKQN 374


>gi|170682558|ref|YP_001746118.1| putative protoheme IX biogenesis protein [Escherichia coli SMS-3-5]
 gi|300939980|ref|ZP_07154608.1| HemY protein [Escherichia coli MS 21-1]
 gi|170520276|gb|ACB18454.1| HemY protein [Escherichia coli SMS-3-5]
 gi|300455184|gb|EFK18677.1| HemY protein [Escherichia coli MS 21-1]
          Length = 398

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|156972665|ref|YP_001443572.1| heme biosynthesis protein [Vibrio harveyi ATCC BAA-1116]
 gi|156524259|gb|ABU69345.1| hypothetical protein VIBHAR_00317 [Vibrio harveyi ATCC BAA-1116]
          Length = 393

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 124/383 (32%), Gaps = 20/383 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N+    S   ++  +   L A   L  
Sbjct: 1   MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIATLAALFFLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  VVKKVVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       ++   +         AV        +  R  +  SA    
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRDNEFESAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             AL        +   +++  Y+  K W   I  + Q  K        +A L+       
Sbjct: 176 Q-ALKGQYANNSIVLNLLKTTYMQLKLWQPLIDLMPQLSKAKLVTEEEQAELIQKAQCGL 234

Query: 237 ADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             +          I         +K   + I    C A  LIS+    +A  ++++  K 
Sbjct: 235 LHEVAQQQGSEGLISHWSGLPRKVKQDAHLI---GCFAHELISRKADNEAFTVIKEALKK 291

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +P PE+  +   L   ++   +     + +   E+  +   ++          +A     
Sbjct: 292 SPTPELYQLLPELNLPDSHPVIVFLEGVLKREPENAAAQSALAHFFFRQEKWQEAQEHFE 351

Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372
           +A+K+      +  LA   +  +
Sbjct: 352 VALKLRSDVSDYAYLADTLEKQN 374


>gi|331665447|ref|ZP_08366346.1| HemY protein [Escherichia coli TA143]
 gi|331057345|gb|EGI29334.1| HemY protein [Escherichia coli TA143]
          Length = 398

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKTHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|227114733|ref|ZP_03828389.1| putative protoheme IX biogenesis protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 399

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 118/365 (32%), Gaps = 9/365 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I   N   +TS   ++ +L  F  A++ +  V R      +        R 
Sbjct: 23  VAGHQGYVLIQTDNYDIQTSVTGLVIMLILFFLAFLAVEWVLRRIFRTGSRTRGWFLGRK 82

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A          
Sbjct: 83  RTRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 140

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +         + ++A+    K L+++P  P V     Q ++
Sbjct: 141 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 200

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254
               +S  +  L   +K    +   R + L  ++      +    G             +
Sbjct: 201 RTHAYSALLDILPAMRKINL-YPEQRLLDLQQQAYIGLMNQAMADGGSEGLKSWWNNQSR 259

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I   +  A+ LI  +    A+ I+    K      +  +   L + N     K  
Sbjct: 260 KVRHEIPLQVAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKVL 319

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            +  + +  +      + ++ ++ G   QA      A+++ P    +   A         
Sbjct: 320 HQYIKQHGATPLLSSTLGQLLMKHGEWQQASDAFRTALELRPDAYDYAWRADALDRLRLP 379

Query: 375 TDKIL 379
            +   
Sbjct: 380 DEAAQ 384


>gi|218550976|ref|YP_002384767.1| protoheme IX biogenesis protein [Escherichia fergusonii ATCC 35469]
 gi|218358517|emb|CAQ91164.1| putative protoheme IX synthesis protein [Escherichia fergusonii
           ATCC 35469]
          Length = 398

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+I+P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEITPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADDGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|15804390|ref|NP_290430.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           EDL933]
 gi|15833986|ref|NP_312759.1| protoheme IX biogenesis protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|16131654|ref|NP_418246.1| predicted protoheme IX synthesis protein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|24115094|ref|NP_709604.1| putative protoheme IX biogenesis protein [Shigella flexneri 2a str.
           301]
 gi|26250540|ref|NP_756580.1| putative protoheme IX biogenesis protein [Escherichia coli CFT073]
 gi|30064905|ref|NP_839076.1| putative protoheme IX biogenesis protein [Shigella flexneri 2a str.
           2457T]
 gi|74314313|ref|YP_312732.1| putative protoheme IX biogenesis protein [Shigella sonnei Ss046]
 gi|82546153|ref|YP_410100.1| protoheme IX biogenesis protein [Shigella boydii Sb227]
 gi|89110218|ref|AP_003998.1| predicted protoheme IX synthesis protein [Escherichia coli str.
           K-12 substr. W3110]
 gi|91213323|ref|YP_543309.1| putative protoheme IX biogenesis protein [Escherichia coli UTI89]
 gi|110644125|ref|YP_671855.1| putative protoheme IX biogenesis protein [Escherichia coli 536]
 gi|110807510|ref|YP_691030.1| putative protoheme IX biogenesis protein [Shigella flexneri 5 str.
           8401]
 gi|117626059|ref|YP_859382.1| putative protoheme IX biogenesis protein [Escherichia coli APEC O1]
 gi|157157643|ref|YP_001465283.1| putative protoheme IX biogenesis protein [Escherichia coli E24377A]
 gi|157163275|ref|YP_001460593.1| putative protoheme IX biogenesis protein [Escherichia coli HS]
 gi|168750389|ref|ZP_02775411.1| HemY protein [Escherichia coli O157:H7 str. EC4113]
 gi|168753696|ref|ZP_02778703.1| HemY protein [Escherichia coli O157:H7 str. EC4401]
 gi|168764120|ref|ZP_02789127.1| HemY protein [Escherichia coli O157:H7 str. EC4501]
 gi|168768080|ref|ZP_02793087.1| HemY protein [Escherichia coli O157:H7 str. EC4486]
 gi|168775650|ref|ZP_02800657.1| HemY protein [Escherichia coli O157:H7 str. EC4196]
 gi|168780698|ref|ZP_02805705.1| HemY protein [Escherichia coli O157:H7 str. EC4076]
 gi|168786637|ref|ZP_02811644.1| HemY protein [Escherichia coli O157:H7 str. EC869]
 gi|168801137|ref|ZP_02826144.1| HemY protein [Escherichia coli O157:H7 str. EC508]
 gi|170083286|ref|YP_001732606.1| protoheme IX synthesis protein [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187730910|ref|YP_001882495.1| putative protoheme IX biogenesis protein [Shigella boydii CDC
           3083-94]
 gi|191166115|ref|ZP_03027950.1| HemY protein [Escherichia coli B7A]
 gi|191174262|ref|ZP_03035771.1| HemY protein [Escherichia coli F11]
 gi|193065682|ref|ZP_03046747.1| HemY protein [Escherichia coli E22]
 gi|193068034|ref|ZP_03048999.1| HemY protein [Escherichia coli E110019]
 gi|194429198|ref|ZP_03061726.1| HemY protein [Escherichia coli B171]
 gi|194438665|ref|ZP_03070753.1| HemY protein [Escherichia coli 101-1]
 gi|195938088|ref|ZP_03083470.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208806268|ref|ZP_03248605.1| HemY protein [Escherichia coli O157:H7 str. EC4206]
 gi|208812847|ref|ZP_03254176.1| HemY protein [Escherichia coli O157:H7 str. EC4045]
 gi|208820041|ref|ZP_03260361.1| HemY protein [Escherichia coli O157:H7 str. EC4042]
 gi|209395966|ref|YP_002273318.1| HemY protein [Escherichia coli O157:H7 str. EC4115]
 gi|209921274|ref|YP_002295358.1| putative protoheme IX biogenesis protein [Escherichia coli SE11]
 gi|217324425|ref|ZP_03440509.1| HemY protein [Escherichia coli O157:H7 str. TW14588]
 gi|218556361|ref|YP_002389275.1| putative protoheme IX biogenesis protein [Escherichia coli IAI1]
 gi|218560865|ref|YP_002393778.1| protoheme IX biogenesis protein [Escherichia coli S88]
 gi|218692078|ref|YP_002400290.1| putative protoheme IX biogenesis protein [Escherichia coli ED1a]
 gi|227888616|ref|ZP_04006421.1| possible porphoryin biosynthesis protein HemY [Escherichia coli
           83972]
 gi|237702809|ref|ZP_04533290.1| HemY protein [Escherichia sp. 3_2_53FAA]
 gi|238902879|ref|YP_002928675.1| putative protoheme IX synthesis protein [Escherichia coli BW2952]
 gi|253775575|ref|YP_003038406.1| protoheme IX biogenesis protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163743|ref|YP_003046851.1| putative protoheme IX biogenesis protein [Escherichia coli B str.
           REL606]
 gi|254795798|ref|YP_003080635.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           str. TW14359]
 gi|256021458|ref|ZP_05435323.1| putative protoheme IX biogenesis protein [Shigella sp. D9]
 gi|256026148|ref|ZP_05440013.1| putative protoheme IX biogenesis protein [Escherichia sp. 4_1_40B]
 gi|260846425|ref|YP_003224203.1| putative protoheme IX synthesis protein HemY [Escherichia coli
           O103:H2 str. 12009]
 gi|260857795|ref|YP_003231686.1| putative protoheme IX synthesis protein HemY [Escherichia coli
           O26:H11 str. 11368]
 gi|260870524|ref|YP_003236926.1| putative protoheme IX synthesis protein HemY [Escherichia coli
           O111:H- str. 11128]
 gi|261225574|ref|ZP_05939855.1| predicted protoheme IX synthesis protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261255620|ref|ZP_05948153.1| putative protoheme IX synthesis protein HemY [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291285215|ref|YP_003502033.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7
           str. CB9615]
 gi|293417265|ref|ZP_06659890.1| hemY protein [Escherichia coli B185]
 gi|293468116|ref|ZP_06664528.1| hemY protein [Escherichia coli B088]
 gi|300818729|ref|ZP_07098936.1| HemY protein [Escherichia coli MS 107-1]
 gi|300823333|ref|ZP_07103464.1| HemY protein [Escherichia coli MS 119-7]
 gi|300904055|ref|ZP_07121935.1| HemY protein [Escherichia coli MS 84-1]
 gi|300923301|ref|ZP_07139349.1| HemY protein [Escherichia coli MS 182-1]
 gi|300930034|ref|ZP_07145466.1| HemY protein [Escherichia coli MS 187-1]
 gi|300950435|ref|ZP_07164357.1| HemY protein [Escherichia coli MS 116-1]
 gi|300955194|ref|ZP_07167591.1| HemY protein [Escherichia coli MS 175-1]
 gi|300979361|ref|ZP_07174519.1| HemY protein [Escherichia coli MS 200-1]
 gi|300985717|ref|ZP_07177572.1| HemY protein [Escherichia coli MS 45-1]
 gi|301029017|ref|ZP_07192171.1| HemY protein [Escherichia coli MS 196-1]
 gi|301047319|ref|ZP_07194405.1| HemY protein [Escherichia coli MS 185-1]
 gi|301303696|ref|ZP_07209817.1| HemY protein [Escherichia coli MS 124-1]
 gi|301328441|ref|ZP_07221522.1| HemY protein [Escherichia coli MS 78-1]
 gi|301646132|ref|ZP_07246032.1| HemY protein [Escherichia coli MS 146-1]
 gi|306815162|ref|ZP_07449315.1| putative protoheme IX biogenesis protein [Escherichia coli NC101]
 gi|307140500|ref|ZP_07499856.1| putative protoheme IX biogenesis protein [Escherichia coli H736]
 gi|307313624|ref|ZP_07593244.1| HemY protein [Escherichia coli W]
 gi|309796259|ref|ZP_07690669.1| HemY protein [Escherichia coli MS 145-7]
 gi|331644535|ref|ZP_08345655.1| HemY protein [Escherichia coli H736]
 gi|331649626|ref|ZP_08350708.1| HemY protein [Escherichia coli M605]
 gi|331655484|ref|ZP_08356477.1| HemY protein [Escherichia coli M718]
 gi|331660145|ref|ZP_08361081.1| HemY protein [Escherichia coli TA206]
 gi|331670645|ref|ZP_08371482.1| HemY protein [Escherichia coli TA271]
 gi|331679909|ref|ZP_08380572.1| HemY protein [Escherichia coli H591]
 gi|331685519|ref|ZP_08386103.1| HemY protein [Escherichia coli H299]
 gi|332282693|ref|ZP_08395106.1| hemY [Shigella sp. D9]
 gi|81170791|sp|P0ACB9|HEMY_ECO57 RecName: Full=Protein hemY
 gi|81170792|sp|P0ACB8|HEMY_ECOL6 RecName: Full=Protein hemY
 gi|81170793|sp|P0ACB7|HEMY_ECOLI RecName: Full=Protein hemY
 gi|81170794|sp|P0ACC0|HEMY_SHIFL RecName: Full=Protein hemY
 gi|12518666|gb|AAG58994.1|AE005611_4 a late step of protoheme IX synthesis [Escherichia coli O157:H7
           str. EDL933]
 gi|26110970|gb|AAN83154.1|AE016769_269 HemY protein [Escherichia coli CFT073]
 gi|41669|emb|CAA31135.1| unnamed protein product [Escherichia coli]
 gi|148201|gb|AAA67598.1| HemY [Escherichia coli str. K-12 substr. MG1655]
 gi|1790234|gb|AAC76805.1| predicted protoheme IX synthesis protein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13364208|dbj|BAB38155.1| HemY protein [Escherichia coli O157:H7 str. Sakai]
 gi|24054361|gb|AAN45311.1| HemY protein [Shigella flexneri 2a str. 301]
 gi|30043165|gb|AAP18887.1| HemY protein [Shigella flexneri 2a str. 2457T]
 gi|73857790|gb|AAZ90497.1| HemY [Shigella sonnei Ss046]
 gi|81247564|gb|ABB68272.1| HemY [Shigella boydii Sb227]
 gi|85676249|dbj|BAE77499.1| predicted protoheme IX synthesis protein [Escherichia coli str. K12
           substr. W3110]
 gi|91074897|gb|ABE09778.1| protoheme IX synthesis late stage protein [Escherichia coli UTI89]
 gi|110345717|gb|ABG71954.1| HemY protein [Escherichia coli 536]
 gi|110617058|gb|ABF05725.1| a late step of protoheme IX synthesis [Shigella flexneri 5 str.
           8401]
 gi|115515183|gb|ABJ03258.1| putative protoheme IX synthesis protein [Escherichia coli APEC O1]
 gi|157068955|gb|ABV08210.1| HemY protein [Escherichia coli HS]
 gi|157079673|gb|ABV19381.1| HemY protein [Escherichia coli E24377A]
 gi|169891121|gb|ACB04828.1| predicted protoheme IX synthesis protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|187427902|gb|ACD07176.1| HemY protein [Shigella boydii CDC 3083-94]
 gi|187768897|gb|EDU32741.1| HemY protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015423|gb|EDU53545.1| HemY protein [Escherichia coli O157:H7 str. EC4113]
 gi|189001497|gb|EDU70483.1| HemY protein [Escherichia coli O157:H7 str. EC4076]
 gi|189359244|gb|EDU77663.1| HemY protein [Escherichia coli O157:H7 str. EC4401]
 gi|189362676|gb|EDU81095.1| HemY protein [Escherichia coli O157:H7 str. EC4486]
 gi|189365804|gb|EDU84220.1| HemY protein [Escherichia coli O157:H7 str. EC4501]
 gi|189373465|gb|EDU91881.1| HemY protein [Escherichia coli O157:H7 str. EC869]
 gi|189376694|gb|EDU95110.1| HemY protein [Escherichia coli O157:H7 str. EC508]
 gi|190903891|gb|EDV63605.1| HemY protein [Escherichia coli B7A]
 gi|190905445|gb|EDV65075.1| HemY protein [Escherichia coli F11]
 gi|192926649|gb|EDV81278.1| HemY protein [Escherichia coli E22]
 gi|192958654|gb|EDV89092.1| HemY protein [Escherichia coli E110019]
 gi|194412710|gb|EDX29004.1| HemY protein [Escherichia coli B171]
 gi|194422469|gb|EDX38468.1| HemY protein [Escherichia coli 101-1]
 gi|208726069|gb|EDZ75670.1| HemY protein [Escherichia coli O157:H7 str. EC4206]
 gi|208734124|gb|EDZ82811.1| HemY protein [Escherichia coli O157:H7 str. EC4045]
 gi|208740164|gb|EDZ87846.1| HemY protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157366|gb|ACI34799.1| HemY protein [Escherichia coli O157:H7 str. EC4115]
 gi|209753328|gb|ACI74971.1| uroporphyrinogen III methylase [Escherichia coli]
 gi|209753330|gb|ACI74972.1| uroporphyrinogen III methylase [Escherichia coli]
 gi|209753332|gb|ACI74973.1| uroporphyrinogen III methylase [Escherichia coli]
 gi|209753334|gb|ACI74974.1| uroporphyrinogen III methylase [Escherichia coli]
 gi|209753336|gb|ACI74975.1| uroporphyrinogen III methylase [Escherichia coli]
 gi|209914533|dbj|BAG79607.1| porphyrin biosynthetic protein [Escherichia coli SE11]
 gi|217320646|gb|EEC29070.1| HemY protein [Escherichia coli O157:H7 str. TW14588]
 gi|218363130|emb|CAR00771.1| putative protoheme IX synthesis protein [Escherichia coli IAI1]
 gi|218367634|emb|CAR05417.1| putative protoheme IX synthesis protein [Escherichia coli S88]
 gi|218429642|emb|CAR10605.2| putative protoheme IX synthesis protein [Escherichia coli ED1a]
 gi|222035500|emb|CAP78245.1| Protein hemY [Escherichia coli LF82]
 gi|226902980|gb|EEH89239.1| HemY protein [Escherichia sp. 3_2_53FAA]
 gi|227834455|gb|EEJ44921.1| possible porphoryin biosynthesis protein HemY [Escherichia coli
           83972]
 gi|238863057|gb|ACR65055.1| predicted protoheme IX synthesis protein [Escherichia coli BW2952]
 gi|242379332|emb|CAQ34143.1| predicted protoheme IX synthesis protein [Escherichia coli
           BL21(DE3)]
 gi|253326619|gb|ACT31221.1| HemY protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975644|gb|ACT41315.1| predicted protoheme IX synthesis protein [Escherichia coli B str.
           REL606]
 gi|253979800|gb|ACT45470.1| predicted protoheme IX synthesis protein [Escherichia coli
           BL21(DE3)]
 gi|254595198|gb|ACT74559.1| predicted protoheme IX synthesis protein [Escherichia coli O157:H7
           str. TW14359]
 gi|257756444|dbj|BAI27946.1| predicted protoheme IX synthesis protein HemY [Escherichia coli
           O26:H11 str. 11368]
 gi|257761572|dbj|BAI33069.1| predicted protoheme IX synthesis protein HemY [Escherichia coli
           O103:H2 str. 12009]
 gi|257766880|dbj|BAI38375.1| predicted protoheme IX synthesis protein HemY [Escherichia coli
           O111:H- str. 11128]
 gi|260451355|gb|ACX41777.1| HemY protein [Escherichia coli DH1]
 gi|281180850|dbj|BAI57180.1| porphyrin biosynthetic protein [Escherichia coli SE15]
 gi|281603191|gb|ADA76175.1| A late step of protoheme IX synthesis [Shigella flexneri 2002017]
 gi|290765088|gb|ADD59049.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7
           str. CB9615]
 gi|291321494|gb|EFE60932.1| hemY protein [Escherichia coli B088]
 gi|291431033|gb|EFF04028.1| hemY protein [Escherichia coli B185]
 gi|294492014|gb|ADE90770.1| HemY protein [Escherichia coli IHE3034]
 gi|299878011|gb|EFI86222.1| HemY protein [Escherichia coli MS 196-1]
 gi|300300838|gb|EFJ57223.1| HemY protein [Escherichia coli MS 185-1]
 gi|300308033|gb|EFJ62553.1| HemY protein [Escherichia coli MS 200-1]
 gi|300317911|gb|EFJ67695.1| HemY protein [Escherichia coli MS 175-1]
 gi|300403935|gb|EFJ87473.1| HemY protein [Escherichia coli MS 84-1]
 gi|300407991|gb|EFJ91529.1| HemY protein [Escherichia coli MS 45-1]
 gi|300420387|gb|EFK03698.1| HemY protein [Escherichia coli MS 182-1]
 gi|300450242|gb|EFK13862.1| HemY protein [Escherichia coli MS 116-1]
 gi|300462067|gb|EFK25560.1| HemY protein [Escherichia coli MS 187-1]
 gi|300524119|gb|EFK45188.1| HemY protein [Escherichia coli MS 119-7]
 gi|300528695|gb|EFK49757.1| HemY protein [Escherichia coli MS 107-1]
 gi|300840996|gb|EFK68756.1| HemY protein [Escherichia coli MS 124-1]
 gi|300845151|gb|EFK72911.1| HemY protein [Escherichia coli MS 78-1]
 gi|301075658|gb|EFK90464.1| HemY protein [Escherichia coli MS 146-1]
 gi|305851531|gb|EFM51985.1| putative protoheme IX biogenesis protein [Escherichia coli NC101]
 gi|306906605|gb|EFN37117.1| HemY protein [Escherichia coli W]
 gi|307555926|gb|ADN48701.1| HemY protein [Escherichia coli ABU 83972]
 gi|307628863|gb|ADN73167.1| putative protoheme IX biogenesis protein [Escherichia coli UM146]
 gi|308120141|gb|EFO57403.1| HemY protein [Escherichia coli MS 145-7]
 gi|312948355|gb|ADR29182.1| putative protoheme IX biogenesis protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|313647160|gb|EFS11615.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str.
           2457T]
 gi|315063094|gb|ADT77421.1| predicted protoheme IX synthesis protein [Escherichia coli W]
 gi|315138378|dbj|BAJ45537.1| putative protoheme IX biogenesis protein [Escherichia coli DH1]
 gi|315254165|gb|EFU34133.1| HemY protein [Escherichia coli MS 85-1]
 gi|315284726|gb|EFU44171.1| HemY protein [Escherichia coli MS 110-3]
 gi|315293158|gb|EFU52510.1| HemY protein [Escherichia coli MS 153-1]
 gi|315296780|gb|EFU56072.1| HemY protein [Escherichia coli MS 16-3]
 gi|315618501|gb|EFU99087.1| tetratricopeptide repeat family protein [Escherichia coli 3431]
 gi|320176043|gb|EFW51112.1| putative protoheme IX biogenesis protein [Shigella dysenteriae CDC
           74-1112]
 gi|320185462|gb|EFW60231.1| putative protoheme IX biogenesis protein [Shigella flexneri CDC
           796-83]
 gi|320191106|gb|EFW65756.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320639284|gb|EFX08906.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           str. G5101]
 gi|320644669|gb|EFX13719.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H-
           str. 493-89]
 gi|320649994|gb|EFX18497.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H-
           str. H 2687]
 gi|320655340|gb|EFX23282.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320660966|gb|EFX28409.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320666089|gb|EFX33103.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           str. LSU-61]
 gi|323155203|gb|EFZ41387.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14]
 gi|323161137|gb|EFZ47055.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
 gi|323167549|gb|EFZ53255.1| tetratricopeptide repeat family protein [Shigella sonnei 53G]
 gi|323173416|gb|EFZ59045.1| tetratricopeptide repeat family protein [Escherichia coli LT-68]
 gi|323177811|gb|EFZ63395.1| tetratricopeptide repeat family protein [Escherichia coli 1180]
 gi|323182573|gb|EFZ67977.1| tetratricopeptide repeat family protein [Escherichia coli 1357]
 gi|323189478|gb|EFZ74758.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1]
 gi|323380842|gb|ADX53110.1| HemY protein [Escherichia coli KO11]
 gi|323938938|gb|EGB35157.1| hemY protein [Escherichia coli E482]
 gi|323943799|gb|EGB39894.1| hemY protein [Escherichia coli H120]
 gi|323949317|gb|EGB45207.1| hemY protein [Escherichia coli H252]
 gi|323954006|gb|EGB49804.1| hemY protein [Escherichia coli H263]
 gi|323959056|gb|EGB54725.1| hemY protein [Escherichia coli H489]
 gi|323969358|gb|EGB64657.1| hemY protein [Escherichia coli TA007]
 gi|324014705|gb|EGB83924.1| HemY protein [Escherichia coli MS 60-1]
 gi|324016229|gb|EGB85448.1| HemY protein [Escherichia coli MS 117-3]
 gi|324115738|gb|EGC09673.1| hemY protein [Escherichia coli E1167]
 gi|326344257|gb|EGD68017.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           str. 1125]
 gi|326347915|gb|EGD71629.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7
           str. 1044]
 gi|330908101|gb|EGH36620.1| hypothetical protein ECAA86_04133 [Escherichia coli AA86]
 gi|331036207|gb|EGI08442.1| HemY protein [Escherichia coli H736]
 gi|331041496|gb|EGI13644.1| HemY protein [Escherichia coli M605]
 gi|331046805|gb|EGI18889.1| HemY protein [Escherichia coli M718]
 gi|331052713|gb|EGI24748.1| HemY protein [Escherichia coli TA206]
 gi|331062118|gb|EGI34040.1| HemY protein [Escherichia coli TA271]
 gi|331072456|gb|EGI43788.1| HemY protein [Escherichia coli H591]
 gi|331077220|gb|EGI48434.1| HemY protein [Escherichia coli H299]
 gi|332089027|gb|EGI94138.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74]
 gi|332105045|gb|EGJ08391.1| hemY [Shigella sp. D9]
 gi|332750975|gb|EGJ81380.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70]
 gi|332751062|gb|EGJ81466.1| tetratricopeptide repeat family protein [Shigella flexneri K-671]
 gi|332751923|gb|EGJ82318.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71]
 gi|332764358|gb|EGJ94593.1| tetratricopeptide repeat family protein [Shigella flexneri 2930-71]
 gi|332996998|gb|EGK16616.1| tetratricopeptide repeat family protein [Shigella flexneri VA-6]
 gi|332997941|gb|EGK17548.1| tetratricopeptide repeat family protein [Shigella flexneri K-218]
 gi|332998257|gb|EGK17859.1| tetratricopeptide repeat family protein [Shigella flexneri K-272]
 gi|333013797|gb|EGK33160.1| tetratricopeptide repeat family protein [Shigella flexneri K-227]
 gi|333019508|gb|EGK38789.1| tetratricopeptide repeat family protein [Shigella flexneri K-304]
          Length = 398

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|300921489|ref|ZP_07137837.1| HemY protein [Escherichia coli MS 115-1]
 gi|300411606|gb|EFJ94916.1| HemY protein [Escherichia coli MS 115-1]
          Length = 398

 Score = 83.4 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIVPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|301025755|ref|ZP_07189270.1| HemY protein [Escherichia coli MS 69-1]
 gi|331675270|ref|ZP_08376021.1| HemY protein [Escherichia coli TA280]
 gi|300395878|gb|EFJ79416.1| HemY protein [Escherichia coli MS 69-1]
 gi|331067556|gb|EGI38960.1| HemY protein [Escherichia coli TA280]
          Length = 398

 Score = 83.4 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADDGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|255065154|ref|ZP_05317009.1| HemY family protein [Neisseria sicca ATCC 29256]
 gi|255050575|gb|EET46039.1| HemY family protein [Neisseria sicca ATCC 29256]
          Length = 407

 Score = 83.4 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 142/410 (34%), Gaps = 34/410 (8%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++ + +  V+       ++ S  Y  +V I  G  + R +    +  L  F+     L  
Sbjct: 1   MKAVVWIVVLFATAVGIVLTSGIYTGNVYIVVGQVMMRVNLHAFILGLVLFVVTLYFLIK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYK---ALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116
                ++ PA +      R   KG +   AL +  ++        A +  + V +     
Sbjct: 61  FIVGLMNIPARMQRFGTAR---KGRQAAVALNSAGLAFFEGRFEKAEQEAAKVLENKEAG 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175
            N  L  +L    A     + +    L+ + ++P  ++ + Y L  E +    D  +A  
Sbjct: 118 DNRNLALMLGAHAADQMENFELRDHYLKDIEKLPNKQQLSRYLLLAESALGRRDYPTALE 177

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----------NAKEWNRNR 225
               A  I P+   +    ++      +   A   L + +K           A+++    
Sbjct: 178 NLNAAARIHPNLSRLARLQLRYAFDHGD---AEDVLAKSEKLMKVGAINDFEAEQYQSWA 234

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              L+A + +       +    +A+++ +LC       +  A+         +A   + +
Sbjct: 235 YRRLLAEASDATGLKTCLKRIPEALKADELC-------VAIAEKYERLGLYTEAVKWVRQ 287

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSI 341
            +  N  PE+   +   +        ++A+ L +       +    L+ + ++A      
Sbjct: 288 YYPQNRRPELLEAFVESVRFFNERGQQKAIDLADSWLKDKPDDAPLLMYLGQLAYGRSLW 347

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +A +    ++ + P     L+LA++    +    K     +  L A+ D
Sbjct: 348 GKAQSYLEASIALQPSIAARLMLARVLD-ETGQPQKAQEQRKLVLEAVSD 396


>gi|270264248|ref|ZP_06192515.1| hypothetical protein SOD_g01850 [Serratia odorifera 4Rx13]
 gi|270041897|gb|EFA14994.1| hypothetical protein SOD_g01850 [Serratia odorifera 4Rx13]
          Length = 397

 Score = 83.4 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/364 (13%), Positives = 109/364 (29%), Gaps = 7/364 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +        + +  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMAVLLFVVLLAIEWILRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RSRARKQTKAALIKLAEGDYKQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDDFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   +   T +  V  +        G+ ++A+    + L+ +P  P V     Q Y+
Sbjct: 139 QYLERAAEAADTDQLPVDITRVRIQLAQGENHAARHGVDRLLNQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
               ++  +  L            E    +    I    +               +  + 
Sbjct: 199 RTGAFASLLEILPSMGKINLHTEAELQALQQQAYIGLMNQAMADEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             + +   I   + LI  N    A+ I+    K      +  +   L S N     K   
Sbjct: 259 TRHEVPLQIAMVEHLIECNDHEMAQEIVLDSLKRQYDERLVLLIPRLKSGNPEQLEKALR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ ++ G   QA      A+K  P    +  LA +      + 
Sbjct: 319 QQVKQHGATPLLNSTLGQLLMKHGEWQQAADAFREALKQRPDAYDYAWLADVLDKLHRSD 378

Query: 376 DKIL 379
           +   
Sbjct: 379 EAAQ 382


>gi|218697516|ref|YP_002405183.1| putative protoheme IX biogenesis protein [Escherichia coli 55989]
 gi|218354248|emb|CAV00918.1| putative protoheme IX synthesis protein [Escherichia coli 55989]
          Length = 398

 Score = 83.4 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|218707436|ref|YP_002414955.1| putative protoheme IX biogenesis protein [Escherichia coli UMN026]
 gi|293407429|ref|ZP_06651349.1| protoheme IX biogenesis protein [Escherichia coli FVEC1412]
 gi|298383169|ref|ZP_06992763.1| protoheme IX biogenesis protein [Escherichia coli FVEC1302]
 gi|300900650|ref|ZP_07118808.1| HemY protein [Escherichia coli MS 198-1]
 gi|218434533|emb|CAR15459.1| putative protoheme IX synthesis protein [Escherichia coli UMN026]
 gi|291425540|gb|EFE98578.1| protoheme IX biogenesis protein [Escherichia coli FVEC1412]
 gi|298276405|gb|EFI17924.1| protoheme IX biogenesis protein [Escherichia coli FVEC1302]
 gi|300355866|gb|EFJ71736.1| HemY protein [Escherichia coli MS 198-1]
          Length = 398

 Score = 83.4 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L ++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLKVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|218701287|ref|YP_002408916.1| putative protoheme IX biogenesis protein [Escherichia coli IAI39]
 gi|218371273|emb|CAR19107.1| putative protoheme IX synthesis protein [Escherichia coli IAI39]
          Length = 398

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAYVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|90023304|ref|YP_529131.1| metal dependent phosphohydrolase [Saccharophagus degradans 2-40]
 gi|89952904|gb|ABD82919.1| metal dependent phosphohydrolase [Saccharophagus degradans 2-40]
          Length = 403

 Score = 83.4 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 127/405 (31%), Gaps = 65/405 (16%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+R + Y  ++  +  S   +  +    + I++G+       +     ++ F    +LL+
Sbjct: 1   MMRALIYCLILLCLGASLTYLVQHDTGYILISYGDTSVEMRFWF---GVFTFSIGLLLLW 57

Query: 60  AVSRFFLSCPAML---FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
                                +    +  +    GL++    N   A+K     ++    
Sbjct: 58  WCFGLIRRGLTAFGVSRSWWSESKQKRAERHTQRGLINFVEGNWRAAKKDLVGAAK---L 114

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSA 173
            ++ LV+ L             A    E + +   TR      L  ++ +     DL  A
Sbjct: 115 SDKPLVHYLAA-----------ARSAYE-LGEKEETRF-----LIQQAEKHAPENDLAVA 157

Query: 174 QRYAT----------------KALDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQ 213
              A                 +A     + P     V++         ++W+  +  L  
Sbjct: 158 ISQARILLMEKQLEQCLAVLTRARANHGEHP----VVLELLCRTTIQLRDWTSLVELLPL 213

Query: 214 KKKNA---KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---- 266
             K      E      +      L++          H  I  L    ++    + A    
Sbjct: 214 LAKYKVYDAEELAQLKLNAYLSRLQHLAATAKKEGDHVLIRDLHAFWDAAPKELKANEKL 273

Query: 267 ----AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
               A  LI      +AE IL    K + HPE+ N+Y    +  +  +L  A    + + 
Sbjct: 274 LFCYAHELIKAKLYDEAESILRVKLKKSWHPELVNLYGRSRTVKSKDQLTHAESWLKTHP 333

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
           E     + + +IA+      +A      ++K+    + +  LA++
Sbjct: 334 EDAVLHLALGRIAIRNKLWGKARGYLEQSIKLRETPQAYAELAEV 378


>gi|88813068|ref|ZP_01128310.1| hemY protein [Nitrococcus mobilis Nb-231]
 gi|88789701|gb|EAR20826.1| hemY protein [Nitrococcus mobilis Nb-231]
          Length = 420

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 123/391 (31%), Gaps = 9/391 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL    FV+   + + +    Y      T G    + S FV         FA   L++
Sbjct: 1   MKRLFLILFVLLFSVVAALWFDEYKGYALFTAGPWTVQMSLFVFAGGFLALWFALNALWS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     PA +      R   K  K L  GLM +A      + K  + +          
Sbjct: 61  LLRQLWFMPAGVRLWAGNRRRVKARKKLVGGLMLLAEGRNEESEK--AVLQGADVVDLPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK- 179
           L YL+    A  +  ++   ++   +  I   R     +L     ++      Q  A   
Sbjct: 119 LSYLVAAFAAQRQGAWDS-RDQYLELAAIGDKRAQIGLALLQAQLQMQARQWVQAMAKLD 177

Query: 180 -ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSLEN 236
              + +P+       + +     ++W R    L   +KN               A++  +
Sbjct: 178 WVRERAPNNHHALRLLAESAEARQDWERLAKLLPDLRKNGVLAAAELEDVETRTAQARLH 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
                           L      +   +   A+SLI   +  +AE +L    + +  P +
Sbjct: 238 VAVEQGSEQIEAVWRGLTRDQKRLPGVVALYAQSLIRVGQSEQAEHLLRGGLEKDWDPRL 297

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            N+Y  L         +   R  +   E  + L      AL    +  A +    A +  
Sbjct: 298 VNVYAELDLNPATRTSEVLERWLKDRPEDPDLLFAAGCQALRSEQLGSARSYLEAASRQV 357

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
            R  I  LL  + +     ++K     + AL
Sbjct: 358 ERPMILCLLGDVYER-LGESNKARDSYRRAL 387


>gi|260596026|ref|YP_003208597.1| putative protoheme IX biogenesis protein [Cronobacter turicensis
           z3032]
 gi|260215203|emb|CBA27051.1| Protein hemY [Cronobacter turicensis z3032]
          Length = 387

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I        TS   +  +    L     +  + R      A        R 
Sbjct: 10  VAGHQGYVLIQTDTWNIETSVTGLAIMAILSLVVLFAIEWLLRRLFHTGARTRGWFAGRK 69

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 70  RSRARKQTKLALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 127

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    + L+I+P  P V  
Sbjct: 128 QHLERAAELADNDQIPVEITRV-------RLQLARNENHAARHGVDRLLEITPRHPEVLR 180

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIA--RSLENADKGDMIASYHDA 249
              Q Y+    WS  +  +   +K    +     A+   A    ++ A            
Sbjct: 181 LAEQAYIRTGAWSSLLDIIPSMQKAGVGDDEHRDALTRQAWIGLMDQARADQGSDGLKTW 240

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             +         A   A A+ LI  +  + A+ I+    K      +  +   L + N  
Sbjct: 241 WRNQSRKTRHQPALQVAMAEHLIECDDHQTAQEIILDGLKRQYDDRLVLLMPRLKAGNPE 300

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + ++ +  G   +A      A+K  P    +  LA + 
Sbjct: 301 QLEKALRQQIKTYGDRPLLWSTLGQLLMSHGEWKEASLAFRAALKQRPDAFDYAWLADVL 360

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 361 DRLHQPEEAA 370


>gi|290477120|ref|YP_003470033.1| protoheme IX synthesis protein [Xenorhabdus bovienii SS-2004]
 gi|289176466|emb|CBJ83275.1| protein in late step of protoheme IX synthesis with TPR-like domain
           [Xenorhabdus bovienii SS-2004]
          Length = 401

 Score = 83.1 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 121/392 (30%), Gaps = 22/392 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML+++  F ++ + +    ++S +   V I   N    TS   ++ +     F  IL+  
Sbjct: 1   MLKVLLLFIILIVGVVLGPVLSGHQGYVLIQTDNHNITTSVTAMVIMFVLLQFLLILIGW 60

Query: 61  VSRFFLSCPAMLFHM-LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
             R                    +        L+ +A  +    +  H          + 
Sbjct: 61  CYRRLKRTSTFTHSWLFGGYKRSRARLQTKQALLKLAEGDFK--QVEHLMTRNADHAESP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLN 171
            + YLL  + A     Y+   + +E   +        +  TR              G+++
Sbjct: 119 VVNYLLAAEAAQQRGDYHRTIQYIERAAEVADKDQLPVDITRV-------RIQLAQGEVH 171

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAI 227
           +A+    K L+ +P  P V     Q Y  +  +   I  L    K      +  ++ R  
Sbjct: 172 AARNGVDKLLNHAPRHPEVLRLAEQAYTQSGAYQSLIDILPSLIKVGLCDEEHIHQLRQQ 231

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
             I    +   +           +  +   N I+  +  A+ LI  N    A+ I+    
Sbjct: 232 AYIGLMNQIMAEKGSTGLKAWWKDQNRKLRNDIVLQVAMAEHLIECNDHDTAQQIVLNGL 291

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           K      +  +  HL ++ T    K    L + +  +      + ++AL      +A   
Sbjct: 292 KQQYDERLLLLIPHLKADETEALQKSLAYLLKRHGATPLLNSTLGQVALHHSQWAEAETA 351

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
              A+   P    +  LA          +   
Sbjct: 352 FKAALVQRPDAHDYAWLADALDKQHKREEAAQ 383


>gi|324111025|gb|EGC05012.1| hemY protein [Escherichia fergusonii B253]
 gi|325499230|gb|EGC97089.1| protoheme IX biogenesis protein [Escherichia fergusonii ECD227]
          Length = 398

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADDGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|153835504|ref|ZP_01988171.1| HemY protein [Vibrio harveyi HY01]
 gi|148867930|gb|EDL67140.1| HemY protein [Vibrio harveyi HY01]
          Length = 393

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 124/383 (32%), Gaps = 20/383 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N+    S   ++  +   L A   L  
Sbjct: 1   MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIAALAALFFLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  VVKKVVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       ++   +         AV        +  R  +  SA    
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRDNEFESAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             AL        +   +++  Y+  K W   I  + Q  K        +A ++       
Sbjct: 176 Q-ALKGQYANNSIVLNLLKTTYMQLKLWQPLIDLMPQLSKAKLVTEEEQAEMIQKAQCGL 234

Query: 237 ADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             +          I         +K   + I    C A  LIS+    +A  ++++  K 
Sbjct: 235 LHEVAQQQGSEGLISHWNGLPRKVKQDAHLI---GCFAHELISRKADNEAFTVIKEALKK 291

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +P PE+  +   L   ++   +     + +   E+  +   ++          +A     
Sbjct: 292 SPTPELYQLLPELNLPDSHPVIVFLEGVLKREPENAAAQSALAHFFFRQEKWQEAQEHFE 351

Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372
           +A+K+      +  LA   +  +
Sbjct: 352 VALKLRSDVSDYAYLADTLEKQN 374


>gi|320198492|gb|EFW73093.1| putative protoheme IX biogenesis protein [Escherichia coli EC4100B]
          Length = 398

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V +   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLLQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|163803634|ref|ZP_02197499.1| HemY protein [Vibrio sp. AND4]
 gi|159172582|gb|EDP57442.1| HemY protein [Vibrio sp. AND4]
          Length = 393

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 117/376 (31%), Gaps = 18/376 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N+    S   ++ ++   L A  LL  
Sbjct: 1   MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVLLVIAVLTALFLLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V +  +   +  ++    R      +    G++ +   +   A K  +  +  H      
Sbjct: 61  VIKKVVYASSSTWNYFSVRKMRHSRRFTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A  +       ++   +         AV        +  R  +  +A    
Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRENEFEAAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
                       V   +   Y+  K W   +  + Q  K        +A L+        
Sbjct: 176 QTLKSQYTSNAIVLNLLKTTYIQLKLWQPLLDLMPQLSKAKLVTEEEQAELIQKSQFGLL 235

Query: 238 DKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            +          I         ++   + I    C A  LIS+    +A  ++++  K N
Sbjct: 236 HEVAQQQGSEGLISHWNSLPRKVRQDSHLI---GCFAHELISRKADAEAFTVIKEALKKN 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P PE+  +   L   +    +       +   ++  +   ++          +A     +
Sbjct: 293 PSPELYRLLPELNLADIHPVVIFLEGTLKREPDNAAAQSALAHFYFRQERWQEAQQHFEI 352

Query: 351 AMKIAPRKEIFLLLAQ 366
           A+K+      +  LA 
Sbjct: 353 ALKLRSDVSDYAFLAD 368


>gi|261378809|ref|ZP_05983382.1| HemY family protein [Neisseria cinerea ATCC 14685]
 gi|269144789|gb|EEZ71207.1| HemY family protein [Neisseria cinerea ATCC 14685]
          Length = 405

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 26/396 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVILFAAAVGLALASGIYTGDVFIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K    L    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFSLARKGRKAALYLNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  + +    
Sbjct: 121 TLALMLGAHAAGQMGNTELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYETVEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++     +    ++      +   A+  L + +K +K      A  L     E   
Sbjct: 181 AAAKMNAGLTRLVRLQLRYAFERGD---ALEVLAKTEKLSK------AGALGESETEQYQ 231

Query: 239 KGDMIASYHDAIES--LKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEKIWKV 289
                    DA ++  LK+C   I         S+  A+         +A   +++ +  
Sbjct: 232 NWAYRRLLADADDAVSLKVCLKRIPDSLKNGELSVSVAEKYERLGLYAEAVRWVKQHYPQ 291

Query: 290 NPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           +  PE+   +      L   +    +  A        ++   L+ + ++A       +A 
Sbjct: 292 SRRPELLEAFVESVRFLGERDQQKAIDLADAWLRDQPDNALLLMYLGQLAYGRKLWGKAK 351

Query: 346 AKAMLAMKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
                ++ + P     L+LA++  E   +   +   
Sbjct: 352 GYLEASIALKPSISARLVLAKVFDEIGETQKAEAQR 387


>gi|82779020|ref|YP_405369.1| putative protoheme IX biogenesis protein [Shigella dysenteriae
           Sd197]
 gi|309784518|ref|ZP_07679156.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
 gi|81243168|gb|ABB63878.1| a late step of protoheme IX synthesis [Shigella dysenteriae Sd197]
 gi|308927624|gb|EFP73093.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
          Length = 398

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPLHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|332084684|gb|EGI89872.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82]
          Length = 398

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L ++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLVVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|324007479|gb|EGB76698.1| HemY protein [Escherichia coli MS 57-2]
          Length = 398

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGCEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|323974383|gb|EGB69511.1| hemY protein [Escherichia coli TW10509]
          Length = 398

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|283787521|ref|YP_003367386.1| Porphyrin biosynthetic protein [Citrobacter rodentium ICC168]
 gi|282950975|emb|CBG90652.1| Porphyrin biosynthetic protein [Citrobacter rodentium ICC168]
          Length = 399

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/370 (13%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   ++ IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDTYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    + L+++P  P V  
Sbjct: 140 QHLERAAELADNDTIPVEITRV-------RLQLARNENHAARHGIDRLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +R  L     +   D+             
Sbjct: 193 LAEQAYIRTGAWSSLLDIIPSMAKANVGDEEHRDALEQQAWIGLMDQARADRGNEGLREW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLLLPIPRLKTNNPQ 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKSVGDRPLLWSTLGQSLMKHGEWQEATIAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|238760187|ref|ZP_04621334.1| hypothetical protein yaldo0001_1030 [Yersinia aldovae ATCC 35236]
 gi|238701623|gb|EEP94193.1| hypothetical protein yaldo0001_1030 [Yersinia aldovae ATCC 35236]
          Length = 399

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 116/365 (31%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   + I   N    TS   ++ +L  FL  ++++  + R               R 
Sbjct: 21  LAGHQGYMLIQTDNYNVETSVTGLVIMLVLFLVTFLIIEWILRRIFRTGTRTRGWFMGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RSRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V       Y+
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAELAYL 198

Query: 200 LAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            +  +S  +  L      +   A+E         I    +   +           +  + 
Sbjct: 199 RSGAYSSLLEVLPAMGKVQLHTAEELAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L S N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDSLKRQYDERLILLIPRLKSGNPEPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QHIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADACDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|296162269|ref|ZP_06845064.1| HemY domain protein [Burkholderia sp. Ch1-1]
 gi|295887536|gb|EFG67359.1| HemY domain protein [Burkholderia sp. Ch1-1]
          Length = 396

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/410 (12%), Positives = 123/410 (30%), Gaps = 46/410 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++ ++     +V       V + +       S  + +  L         L  
Sbjct: 3   IRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
           + R     P  +     +    K + AL   + ++ A     A K               
Sbjct: 63  IFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122

Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
                   H  H          QI  A   +  A      ++     R            
Sbjct: 123 GLIAATAAHRMHEYARRDEWLAQINEA--DWQDAR-----LMATADMRADGR-------- 167

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221
              D + A    T+            +  ++     K W   +  +     ++  +    
Sbjct: 168 ---DADGALTALTEMQSQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280
            R R I       +     D +    +++ +  +        +  AA+ L++ N+ ++A 
Sbjct: 225 VRLRQIAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADLAAELLVALNRPQEAR 281

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            I+E+    N    +   Y      + +  +++A   ++   E  + +  + ++ L    
Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQKDRPEDADLMFALGRLCLHQQL 341

Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
             +A +    A+K+A  +         LA++ +          ++ +SAL
Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTEKASQHYRESAL 391


>gi|323964046|gb|EGB59536.1| hemY protein [Escherichia coli M863]
 gi|327250651|gb|EGE62357.1| tetratricopeptide repeat family protein [Escherichia coli STEC_7v]
          Length = 398

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFIGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|320197611|gb|EFW72223.1| putative protoheme IX biogenesis protein [Escherichia coli
           WV_060327]
          Length = 398

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 LLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|260767545|ref|ZP_05876481.1| HemY-like protein [Vibrio furnissii CIP 102972]
 gi|260617445|gb|EEX42628.1| HemY-like protein [Vibrio furnissii CIP 102972]
          Length = 393

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/379 (13%), Positives = 114/379 (30%), Gaps = 12/379 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F V+ L + +    +     V I+  +     S   ++  +   L     L  
Sbjct: 1   MVRVLFLFVVLGLGLFAGTQYAGQQGYVLISVASHTIEMSVTTLVIFIIGALAGLFALEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +     ++ +   +   A K  +  +  H      
Sbjct: 61  LLKKLMYASSNTWNWFSVRKLRRSRRYTNEAIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          ++   +         AV        +    G+L +A    
Sbjct: 119 LCYLVASEAANGMGDRAK-RDRYLALAAQQENATLAVELTR--AKQQLSDGELQAALSTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           +      P+   V   + Q Y   K+W   +  L +  K  +        L +       
Sbjct: 176 SALQADHPNNTIVLNLLKQTYTQLKQWQPLLDLLPKLVKAKRMTQDEADQLALVAHQGVM 235

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHP 293
           D           I         + A      +LI Q   RKA+     ++++  K  P P
Sbjct: 236 DTIASQKGSEGLIAHWNSLPRKLKAESQLELNLIRQLIVRKADYEAFTLIKESLKKRPSP 295

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +  +   L   +    +         +  + E+   + ++ L       A      A+ 
Sbjct: 296 ALYALLPELNISDRHPAIVLLKDALNRDGNNAEAHSALGQLYLREQQWADAQQHLEKALS 355

Query: 354 IAPRKEIFLLLAQIEQANS 372
           +      +  LA   +   
Sbjct: 356 LRSSVSDYAYLADALEKQH 374


>gi|91782422|ref|YP_557628.1| hypothetical protein Bxe_A3409 [Burkholderia xenovorans LB400]
 gi|91686376|gb|ABE29576.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 396

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/410 (12%), Positives = 123/410 (30%), Gaps = 46/410 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++ ++     +V       V + +       S  + +  L         L  
Sbjct: 3   IRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
           + R     P  +     +    K + AL   + ++ A     A K               
Sbjct: 63  IFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122

Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
                   H  H          QI  A   +  A      ++     R            
Sbjct: 123 GLIAATAAHRMHEYARRDEWLAQIKEA--DWQDAR-----LMATADMRADGR-------- 167

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221
              D + A    T+            +  ++     K W   +  +     ++  +    
Sbjct: 168 ---DADGALAALTEMQSQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280
            R R I       +     D +    +++ +  +        +  AA+ L++ N+ ++A 
Sbjct: 225 VRLRQIAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADLAAELLVALNRPQEAR 281

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            I+E+    N    +   Y      + +  +++A   ++   E  + +  + ++ L    
Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQKDRPEDADLMFALGRLCLHQQL 341

Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
             +A +    A+K+A  +         LA++ +          ++ +SAL
Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTEKASQHYRESAL 391


>gi|153949571|ref|YP_001399192.1| protoheme IX biogenesis protein [Yersinia pseudotuberculosis IP
           31758]
 gi|152961066|gb|ABS48527.1| hemY protein [Yersinia pseudotuberculosis IP 31758]
          Length = 406

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 113/365 (30%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  +L   L A+ ++  V R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVTTSVTGLAIMLVLLLVAFFIVEWVLRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +    +   L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARNQMKAALIKLAEGDFLQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++    +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADGDQLPVNITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESLKL 255
            +  +   +  L    K         A L     +   ++               +  + 
Sbjct: 199 RSGAYRSLLDVLPAMGKTQIHTPEEVAALEQQAYIGIMNQCMADEGSEGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L + N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQKIILDSLKHQYDERLVLLIPRLKAGNPEPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|51594537|ref|YP_068728.1| protoheme IX biogenesis protein [Yersinia pseudotuberculosis IP
           32953]
 gi|170026230|ref|YP_001722735.1| putative protoheme IX biogenesis protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186893535|ref|YP_001870647.1| putative protoheme IX biogenesis protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51587819|emb|CAH19421.1| putative protoheme IX biogenesis protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|169752764|gb|ACA70282.1| HemY protein [Yersinia pseudotuberculosis YPIII]
 gi|186696561|gb|ACC87190.1| HemY protein [Yersinia pseudotuberculosis PB1/+]
          Length = 406

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 113/365 (30%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  +L   L A+ ++  V R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVTTSVTGLAIMLVLLLVAFFIVEWVLRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +    +   L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARNQMKAALIKLAEGDFLQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++    +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADGDQLPVNITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESLKL 255
            +  +   +  L    K         A L     +   ++               +  + 
Sbjct: 199 RSGAYRSLLDILPAMSKTQIHTPEEVAALEQQAYIGIMNQCMADEGSEGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L + N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQKIILDSLKHQYDERLVLLIPRLKAGNPEPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|170769818|ref|ZP_02904271.1| HemY protein [Escherichia albertii TW07627]
 gi|170121256|gb|EDS90187.1| HemY protein [Escherichia albertii TW07627]
          Length = 398

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  I    +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIIFILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEVRAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD----MIASYHD 248
              Q Y+    WS  +  +    K       +RA L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAALEQQAWIGLMDQARANDGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASIAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  D  
Sbjct: 372 DRLHKPEDAA 381


>gi|261823399|ref|YP_003261505.1| protoheme IX biogenesis protein [Pectobacterium wasabiae WPP163]
 gi|261607412|gb|ACX89898.1| HemY protein [Pectobacterium wasabiae WPP163]
          Length = 397

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 118/365 (32%), Gaps = 9/365 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I   +   +TS   ++ +L  F  A++ +  + R      +        R 
Sbjct: 21  VAGHQGYVLIQTDDYDIQTSVTALVIMLVLFFLAFLAVEWLLRRIFRTGSRTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A          
Sbjct: 81  RSRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +         + ++A+    K L+++P  P V     Q ++
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254
            A  +S  +  L   +K    +   R + L  ++      +    G             +
Sbjct: 199 RAHAYSALLDILPVMRKINL-YPEARLLDLQQQAYIGLMNQAMADGGSEGLKSWWNNQSR 257

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I   I  A+ LI  +    A+ I+    K      +  +   L + N     K  
Sbjct: 258 KVRHEIPLQIAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKML 317

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            +  +    +      + ++ ++ G   QA      A++  P    +   A   +     
Sbjct: 318 YQYIKQQGATPLLNSTLGQLLMKHGEWQQASDAFRNALEQRPDAYDYAWRADALERLHLP 377

Query: 375 TDKIL 379
            +   
Sbjct: 378 DEAAQ 382


>gi|311693128|gb|ADP96001.1| HemY domain protein [marine bacterium HP15]
          Length = 413

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 135/384 (35%), Gaps = 47/384 (12%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             + I+ G+ L  T+ +V L ++   +   +L   + R   +   ++   + + N  +  
Sbjct: 27  GYIRISLGHYLIETNFWVGLGLIVALIVLTVLTINLIRRLRTSTGLVAGWIARGNERRAR 86

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQY----NIAH 140
           +    GL+++A  N P ARK+ +  +      +  L+  L   Q +     +    ++  
Sbjct: 87  RRTTQGLLALAEGNWPRARKLLTSSASHA---DTPLINYLAAAQASFETGDHEAVDDLLR 143

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALD-------ISPDAPW 189
           +  +                      +G   +  + A     +AL         SP  P+
Sbjct: 144 KAFDSTPGSD--------------MAVGITQAQLQLAGNRLEQALATLVRLRKQSPHHPF 189

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLE---NADK 239
           V + +   Y+  ++W      L + +K +        +  R     L+ R+ E      K
Sbjct: 190 VLKLLKNTYLRLEDWRELSRLLPELRKRSVLSEAELNDLERQVWHNLLERAAEDCRRQQK 249

Query: 240 GDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            D  AS              +          A+ L S   + + E +L K+ + +   E+
Sbjct: 250 QDPEASLEPLTRLWDELPGFLRRDEYTIRDYARLLASLGDEVQTETLLRKVLRNHWSDEL 309

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            N+Y  +  +    +L  A +  +    + E L+ + +++L      +A      ++++ 
Sbjct: 310 INLYGRVKGQKPDEQLLLAEQWLKDRPNNPELLLALGRLSLRNELWGKAREYFETSLRLK 369

Query: 356 PRKEIFLLLAQIEQANSHNTDKIL 379
             +E    L+++          + 
Sbjct: 370 RSREALAELSRLNAHMGEEEASVK 393


>gi|50123111|ref|YP_052278.1| putative protoheme IX biogenesis protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613637|emb|CAG77088.1| porphyrin biosynthetic protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 397

 Score = 81.5 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 119/365 (32%), Gaps = 9/365 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I   N   +TS   ++ +L  F  A++ +  V R  L   +        R 
Sbjct: 21  VAGHQGYVLIQTDNYDIQTSVTGLVIMLVLFFLAFLAVEWVLRRILRTGSRTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A          
Sbjct: 81  RSRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +         + ++++    K L+++P  P V     Q ++
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLARNEDHASRHGVDKLLEVAPRHPEVLRLAEQAFL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254
               +   +  L   +K    +   R + L  R+      +    G             +
Sbjct: 199 RTHAYGALLDILPAMRKINL-YPEARLLDLQQRAYIGLMNQAMADGGSEGLKSWWNNQSR 257

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I   I  A+ LI  +    A+ I+    K      +  +   L + N     K  
Sbjct: 258 KVRHEIPLQIAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKML 317

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            +  + +  +      + ++ ++ G   QA      A+++ P    +   A   +     
Sbjct: 318 HQYIKQHGATPLLSSTLGQLLMKHGEWQQASDAFRTALELRPDAYDYAWRADALERLHLP 377

Query: 375 TDKIL 379
            +   
Sbjct: 378 DEAAQ 382


>gi|215489128|ref|YP_002331559.1| putative protoheme IX biogenesis protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|312969472|ref|ZP_07783674.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
 gi|215267200|emb|CAS11648.1| predicted protoheme IX synthesis protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|312286019|gb|EFR13937.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
          Length = 398

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPKVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHKPEEAA 381


>gi|293413243|ref|ZP_06655905.1| hemY protein [Escherichia coli B354]
 gi|291468191|gb|EFF10688.1| hemY protein [Escherichia coli B354]
          Length = 379

 Score = 81.1 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 2   IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 61

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 62  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 119

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 120 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 172

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+           + 
Sbjct: 173 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 232

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+  +    K      +      L + N  
Sbjct: 233 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQFIIDGLKRQYDDRLLLPIPRLKTNNPE 292

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 293 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 352

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 353 DRLHKPEEAA 362


>gi|315178737|gb|ADT85651.1| hypothetical protein vfu_A00430 [Vibrio furnissii NCTC 11218]
          Length = 393

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 51/379 (13%), Positives = 115/379 (30%), Gaps = 12/379 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F V+ L + +    +     V I+  +     S   ++  +   L     L  
Sbjct: 1   MVRVLFLFVVLGLGLFAGTQYAGQQGYVLISVASHTIEMSVTTLVIFIIGALAGLFALEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +     ++ +   +   A K  +  +  H      
Sbjct: 61  LLKKLMYASSNTWNWFSVRKLRRSRRYTNEAIIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          ++   +         AV        +    G+L +A    
Sbjct: 119 LCYLVASEAANGMGDRAK-RDRYLALAAQQENATLAVELTR--AKQQLSDGELQAALSTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           +      P+   V   + Q Y   K+W   +  L +  K  +        L +       
Sbjct: 176 SALQADHPNNTIVLNLLKQTYTQLKQWQPLLDLLPKLVKAKRMTQDEADQLALVAHQGVM 235

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHP 293
           D           I         + A      +LI Q   RKA+     ++++  K  P P
Sbjct: 236 DTIASQKGSEGLIAHWNSLPRKLKAESQLELNLIRQLIVRKADYEAFTLIKESLKKRPSP 295

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +  +   L   +    +         +  + E+   + ++ L       A      A+ 
Sbjct: 296 ALYALLPELNISDRHPAIVLLKDALNRDGNNAEAHSALGQLYLREQQWADAQQHLEKALS 355

Query: 354 IAPRKEIFLLLAQIEQANS 372
           +      +  LA   +  +
Sbjct: 356 LRSSVSDYAYLADALEKQN 374


>gi|238789372|ref|ZP_04633158.1| hypothetical protein yfred0001_23020 [Yersinia frederiksenii ATCC
           33641]
 gi|238722515|gb|EEQ14169.1| hypothetical protein yfred0001_23020 [Yersinia frederiksenii ATCC
           33641]
          Length = 399

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 115/365 (31%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L   L A++++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMLILVLVAFLIIEWILRRIFRTGARTRGWFMGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V       Y+
Sbjct: 139 QYLERAAEVADTEQLPVDITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAELAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN----ADKGDMIASYHDAIESLKL 255
            +  +S  +  L    K         A L     +        +           +  + 
Sbjct: 199 RSGAYSSLLEILPAMGKVQVHTPDEIAALEQQAYIGIMNQCMAEEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L S N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDSLKRQYDERLVLLIPRLQSGNPDPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|119503705|ref|ZP_01625787.1| metal dependent phosphohydrolase [marine gamma proteobacterium
           HTCC2080]
 gi|119460213|gb|EAW41306.1| metal dependent phosphohydrolase [marine gamma proteobacterium
           HTCC2080]
          Length = 407

 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 109/380 (28%), Gaps = 20/380 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPED-VSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M  LI    +  ++    +         V I+ G+ +  TS +  L +          L 
Sbjct: 1   MRGLIVLVLMGLVLGAVLVNQVDQGGGYVYISLGDVVVETSAWFALLLWLVIWGLLAFLL 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
              R       +L   +  R           GL+S    N   A K    +         
Sbjct: 61  GTIRRVWGTQRVLSGWMGLRKSRNATALTNRGLISFIEGNWERAHK--QLLRSARYSDAP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRY 176
            + +L+  + +      + A E+L     + A    AV     ++      G+   A   
Sbjct: 119 LVNHLIAARASFRLGNIDEAKEQLGKAESVEADAGVAVE--LTQAELQLSAGNYEQALAT 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---------TFLNQKKKNAKEWNRNRAI 227
             +A   +   P+V   + + +    EW               L        E     A+
Sbjct: 177 LVRARANAAKHPYVLALLARAHRHLGEWEALRPLLPELHKYGLLEDVALLGLEGELWDAL 236

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +       +    D+   + D   + +         +C    LI     R+AE  L    
Sbjct: 237 IRSTADQPDGSVKDLSGLWRDIPRAQRDQLKL---KVCYVDVLIKLGGHREAEKQLVAWL 293

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                 E+A        EN    L    +  E        L+  +++AL  G  + A   
Sbjct: 294 GKERQGELAAFLGRFPPENPRKLLNIIRKWLEAPTHDGVLLLAGARVALHAGEWEVAETW 353

Query: 348 AMLAMKIAPRKEIFLLLAQI 367
              A +     E    LA++
Sbjct: 354 LEEAHQGGATAENCCELARL 373


>gi|149191472|ref|ZP_01869721.1| HemY protein [Vibrio shilonii AK1]
 gi|148834660|gb|EDL51648.1| HemY protein [Vibrio shilonii AK1]
          Length = 354

 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 102/328 (31%), Gaps = 10/328 (3%)

Query: 51  FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110
            L    LL  + +  L      F+    R   +  +    G++ +   +  LA K  +  
Sbjct: 12  ALAGLFLLEYIIKKVLYTSVTTFNYFSVRKMRRSRRYTNEGIVKLLEGDWKLAEKKVTRW 71

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIG 168
           +  H      L YL+  + AL +       +    +       + AV  L    ++ R  
Sbjct: 72  ANYH--DMPLLCYLVASEAALGQGDKAK-RDHYLALAAKQENSDLAVQ-LTRAKQAVREE 127

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRN 224
           +   A           P+   V       Y    EW   I  L      K  +  E N  
Sbjct: 128 EWEVAASTLETLKAEHPNNSIVLSLQKTTYRELGEWQALIDLLPKLHKAKLIDELEQNEL 187

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                     + A +       +   +  +    S     C +K LI++    +A  +++
Sbjct: 188 NERAQCGLLEDIASQQGSEGLINHWNKLPRKTRQSTHLVGCFSKQLIARKADAEAFTVIK 247

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +  K   H ++  +   L   +T   +     + +   ++ E+   +++         +A
Sbjct: 248 ETLKKQGHEDLYKVLPELNLADTHPVVVLLEDVVKKQPDTPEAQSALAQFYFREEKWPEA 307

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANS 372
                 A+ + P    +  LA   +  +
Sbjct: 308 QRHFERALSLRPDVSDYAYLADTLEKQN 335


>gi|146280922|ref|YP_001171075.1| HemY protein [Pseudomonas stutzeri A1501]
 gi|145569127|gb|ABP78233.1| HemY protein [Pseudomonas stutzeri A1501]
          Length = 406

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 135/392 (34%), Gaps = 22/392 (5%)

Query: 1   MLR-LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R ++ +  ++++       +S     V IT+    Y +S +V L+++       + + 
Sbjct: 1   MRRLVLVFILLLAIAGLLGWAISQSAGYVLITYDRFRYESSFWVFLALIGCLWLLALAVH 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V        A++     +    +  KA   GL  +A      A       + +     +
Sbjct: 61  WVLGLLHVSGALINPWSRRHRERRVEKASRRGLRELAEGQWGPALGHLQLAAAR---DRQ 117

Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRY 176
            LV+ L   + A    +Y  + E L+   +       A+  L         G    A+  
Sbjct: 118 PLVHYLGAARAANELGEYAQSDELLQKAREREPEAALAI-GLTQAQLQIARGQYVEARAS 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSL 234
            +      P  P+V   + Q YV  ++W+     L + +K+        +   +L   + 
Sbjct: 177 LSALQSDHPRHPYVLTLLQQLYVQLEDWAALCRLLPELRKHRVLPPARLSELEVLAWTAA 236

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASI--------CAAKSLISQNKKRKAEVILEKI 286
                     +   ++E+L     ++ ++           A  L     + KAE +L   
Sbjct: 237 VEQAGQPSELTAEASLEALNQRWQTVPSAQRGEPLVVRAYADGLARLGAQAKAEEVLYAA 296

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            K      +   Y  +   +   +L  A    + + ++   L+ + +++L      +A  
Sbjct: 297 IKRQYDDRLVERYGRVQGSDPARQLANAEGWLKDHPQNAVLLLALGRLSLRNALWGKARD 356

Query: 347 KAMLAMKIAPR----KEIFLLLAQIEQANSHN 374
               +++   R     E+  LLAQ+    + N
Sbjct: 357 YLEASLRFDHRPETCAELARLLAQLGDTENSN 388


>gi|209516092|ref|ZP_03264952.1| HemY domain protein [Burkholderia sp. H160]
 gi|209503552|gb|EEA03548.1| HemY domain protein [Burkholderia sp. H160]
          Length = 396

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 49/410 (11%), Positives = 124/410 (30%), Gaps = 46/410 (11%)

Query: 2   LRLIRYFF-VISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +   + ++ +   +        V + +       S  + +  +         L  
Sbjct: 3   IRGLLWLAGLFAVAVVLAVGGHFDTGQVLLIYPPYRVDMSLNLFIVAVVVLFILLYTLLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
           + R     P  +     +    K + AL   + ++ A     A K               
Sbjct: 63  IIRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122

Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
                   H  H          QI  A   +  A      +L     R            
Sbjct: 123 GLIAATAAHRMHEYARRDEWLAQIDEA--DWQDAR-----LLATADMRADGR-------- 167

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221
              D + A    T+            + +++     K W   +  +     ++  +    
Sbjct: 168 ---DADGALNALTEMQSQGARRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280
            R R +       +     D +    +++ +  +        +  AA+ L++ N+ ++A 
Sbjct: 225 VRLRQLAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADTAAELLVALNRPQEAR 281

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            I+E+    N    +   Y     ++ +  +++A   ++   E  + +  + ++ L    
Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGDDALPLIQKAEAWQKDRPEDADLMFALGRLCLRQQL 341

Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
             +A +    A+K+A  +         LA++ +          ++ +SAL
Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTDKASQHYRESAL 391


>gi|298484665|ref|ZP_07002768.1| HemY domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298160805|gb|EFI01823.1| HemY domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 414

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  V     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++     +  L Y+   + A  + +Y      
Sbjct: 84  RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD   A        +  P  P V   + + Y 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A          + L A           + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGGDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364
            +L+ A    + +      L+ + +I L+     +A      ++++        E+  LL
Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379

Query: 365 AQIEQANSHNT 375
           AQ+ + +  NT
Sbjct: 380 AQLGETDRSNT 390


>gi|258545715|ref|ZP_05705949.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258519032|gb|EEV87891.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 420

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 118/355 (33%), Gaps = 18/355 (5%)

Query: 35  RLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMS 94
               TS  V L +      A   +     +    P +       R   K  + L +G+ +
Sbjct: 34  YYIETSLIVWLLLSLVASVALYHILKALCWLWHSPQIFSRSSAVRRQHKADRLLKSGMTA 93

Query: 95  IAAHNIPLARKMHSYVSQQH-TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + A +   A +      +   +     ++Y     IA   +      +   ++ +  A  
Sbjct: 94  LLAGHYSRAERDLDRGGKLAESLGQNAVIYFENAAIAADRQNAKERRDHYLLLARQDARH 153

Query: 154 EFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           +    +   E+    + G    A +   K     P    +T  + + Y   ++W++A   
Sbjct: 154 QHGSLTRLAEAEIHVQNGAYEQAAKLLEKLHQEEPRNSKITALLDETYAKQQDWAKAWAL 213

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---- 266
           L   + +  E           R    A       +  +++E+L+     + A +      
Sbjct: 214 LPALRPHLAEAE------YSTRQKTYAKGLLHDTATRESVEALEAAWKRLPAEVRRDKDM 267

Query: 267 ----AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
               A +L+  +   +AE +L    +     E    Y+ L   N   +L+   + E  + 
Sbjct: 268 ILQYAGALVENDHPEEAEKLLAAEIRQTQDLEYIQAYSQLRRANFRAQLEHMKQWENKHT 327

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
                L   + IA +   +D A A    A+K +   E F L AQI +A +     
Sbjct: 328 NDAIFLYAKALIAYKAKELDIALAAIEEAVKRSQTGEAFALYAQILEAKNRPEAA 382


>gi|330881674|gb|EGH15823.1| hemY protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 418

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  V     +   ++     +    
Sbjct: 28  EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 87

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++     +  L Y+   + A  + +Y      
Sbjct: 88  RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 145

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD   A        +  P  P V   + + Y 
Sbjct: 146 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 203

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A          + L A           + S   A
Sbjct: 204 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 263

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 264 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 323

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364
            +L+ A    + +      L+ + +I L+     +A      ++++        E+  LL
Sbjct: 324 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 383

Query: 365 AQIEQANSHNT 375
           AQ+ + +  NT
Sbjct: 384 AQLGETDRSNT 394


>gi|254784453|ref|YP_003071881.1| metal dependent phosphohydrolase [Teredinibacter turnerae T7901]
 gi|237683868|gb|ACR11132.1| metal dependent phosphohydrolase [Teredinibacter turnerae T7901]
          Length = 401

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/381 (15%), Positives = 132/381 (34%), Gaps = 24/381 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +L ++    +++  +   +I +     + I+ G+    TS +  +  + F +      + 
Sbjct: 6   LLGILTLCAIVAAPLILELIKADT-GYILISLGSTTIETSFWFAIFAVIFGVLVLRWSYM 64

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  L    + +  L +    +       GL+     N   A+K    V++        
Sbjct: 65  LLRAILRSLGVSWAFLAEGRSRQLNARTQRGLIHYIEGNWQAAKKDLLSVAK--YADQPL 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYA-- 177
           + YL     A            L    ++    E AV  L  ++  ++ +    Q  A  
Sbjct: 123 VHYLAAAHSAHQLGDMETCQALLSKAEEVAPENELAV--LLSQAKMQLANQQCEQCLATL 180

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A  ++P  P V + ++  Y    +W+ A+  L  + K +K + + +   L   ++   
Sbjct: 181 ERARSVAPRHPVVLDLLLTVYQRVNDWA-AVQALLPELKKSKAYTQEQLHSLEVDAVCAV 239

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAE----VILEKIWKVN 290
                           KL  +   + +   +    L     +  AE     +L K W   
Sbjct: 240 LDTHKFNLDELKSYWQKLDKSLKQSQVLVLQYCGHLQRLGAEEAAEQQLRRVLTKQWDAR 299

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM- 349
               +  +Y  +   +   +L  A +         + L+ +++IA+      +A +    
Sbjct: 300 ----LVELYGRVRGGSDNEQLLVAEQWLRERPGDPDLLLALARIAMRNQLWGKARSYFES 355

Query: 350 -LAMKIAP--RKEIFLLLAQI 367
            L ++  P    E   LLAQ+
Sbjct: 356 SLQLQKNPQAYAEFAALLAQL 376


>gi|327479191|gb|AEA82501.1| HemY protein [Pseudomonas stutzeri DSM 4166]
          Length = 406

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 136/392 (34%), Gaps = 22/392 (5%)

Query: 1   MLR-LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R ++ +  ++++       +S     V IT+    Y +S +V L+++       + + 
Sbjct: 1   MRRLVLVFILLLAIAGLLGWAISQSAGYVLITYDRFRYESSFWVFLALIGCLWLLALAVH 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V        A++     +    +  KA   GL  +A      A       +++     +
Sbjct: 61  WVLGLLHVSGALINPWSRRHRERRVEKASRRGLRELAEGQWGPALGHLQLAAER---DRQ 117

Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRY 176
            LV+ L   + A    +Y  + E L+   +       A+  L         G    A+  
Sbjct: 118 PLVHYLGAARAANELGEYAQSDELLQKAREREPEAALAI-GLTQAQLQIARGQYVEARAS 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSL 234
            +      P  P+V   + Q YV  ++W+     L + +K+        +   +L   + 
Sbjct: 177 LSALQSDHPRHPYVLTLLQQLYVQLEDWAALCRLLPELRKHRVLPPARLSELEVLAWTAA 236

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASI--------CAAKSLISQNKKRKAEVILEKI 286
                     +   ++E+L     ++ ++           A  L     + KAE +L   
Sbjct: 237 VEQAGQPSELTAEASLEALNQRWQTVPSAQRGEPLVVRAYADGLARLGAQAKAEEVLYAA 296

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            K      +   Y  +   +   +L  A    + + ++   L+ + +++L      +A  
Sbjct: 297 IKRQYDDRLVERYGRVQGSDPARQLANAEGWLKDHPQNAVLLLALGRLSLRNALWGKARD 356

Query: 347 KAMLAMKIAPR----KEIFLLLAQIEQANSHN 374
               +++   R     E+  LLAQ+    + N
Sbjct: 357 YLEASLRFDHRPETCAELARLLAQLGDTENSN 388


>gi|224826004|ref|ZP_03699107.1| HemY domain protein [Lutiella nitroferrum 2002]
 gi|224601641|gb|EEG07821.1| HemY domain protein [Lutiella nitroferrum 2002]
          Length = 402

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/370 (12%), Positives = 112/370 (30%), Gaps = 17/370 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +L +   +  +       +         S  +++  +   +    L+  
Sbjct: 1   MKFVLWITGLFALAVLVGLASTLNTGYAILFLPPYRLEVSFNLLIVAVILLIVVAHLVLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-QHTFHNE 119
           +       P  +     ++       AL    ++        A +        +    N+
Sbjct: 61  LIGLATGLPEEVRRFQRQKKLKAARHALREAGIAFFEGRFQRAEREAVRALADESAPENK 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY--FESCRIGDLNSAQRYA 177
            L  L+  + A A +  +     L  +  +P  R      +          D   A    
Sbjct: 121 ALALLMAARSAAAMQDLDKRDGYLSQLDALPE-RLQLARHMLDAELKLDAKDTLGALSAI 179

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAILLIARSL 234
            +A  ISP+     +  ++  +L K+    +    +  K      +  R   +    + L
Sbjct: 180 ERARAISPNLTNALKLELKVRLLQKQPEAVLALTEKLLKAEALEPDRARRYRLAAYTQQL 239

Query: 235 ENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW--KVNP 291
           +   +G  I        E  +     +   +   + LI   +   A  ++          
Sbjct: 240 DGFVQGQEIRDWLRRVPEVERNNPTLVSRIV---ERLIVLGEADYAATLIASALGNDDQA 296

Query: 292 HPEIA----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            PE+A     +  HL +E  +  LK A    ++       L+ + ++AL      +A + 
Sbjct: 297 TPELARELGQLAEHLTAEKRLELLKDAESWLKLRPRDHLLLLALGRLALAQQLWGKAQSY 356

Query: 348 AMLAMKIAPR 357
              +  I P 
Sbjct: 357 LEASASIEPT 366


>gi|330890198|gb|EGH22859.1| hemY protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 414

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  V     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRTRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++     +  L Y+   + A  + +Y      
Sbjct: 84  RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD   A        +  P  P V   + + Y 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A          + L A           + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364
            +L+ A    + +      L+ + +I L+     +A      ++++        E+  LL
Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379

Query: 365 AQIEQANSHNT 375
           AQ+ + +  NT
Sbjct: 380 AQLGETDRSNT 390


>gi|71733208|ref|YP_272376.1| hemY protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257485542|ref|ZP_05639583.1| hemY protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289625851|ref|ZP_06458805.1| hemY protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289646417|ref|ZP_06477760.1| hemY protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|71553761|gb|AAZ32972.1| hemY protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320331305|gb|EFW87248.1| hemY protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330867938|gb|EGH02647.1| hemY protein [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330985682|gb|EGH83785.1| hemY protein [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331011834|gb|EGH91890.1| hemY protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 414

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  V     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++     +  L Y+   + A  + +Y      
Sbjct: 84  RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD   A        +  P  P V   + + Y 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A          + L A           + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364
            +L+ A    + +      L+ + +I L+     +A      ++++        E+  LL
Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379

Query: 365 AQIEQANSHNT 375
           AQ+ + +  NT
Sbjct: 380 AQLGETDRSNT 390


>gi|114049128|ref|YP_739678.1| HemY domain-containing protein [Shewanella sp. MR-7]
 gi|113890570|gb|ABI44621.1| HemY domain protein [Shewanella sp. MR-7]
          Length = 388

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 141/409 (34%), Gaps = 44/409 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++ + +  +I + +C    +      V I  G+    TS    + +L  F   + +L  
Sbjct: 1   MIKALIFLGIILIGLCISPWIVGNTGYVYIAAGDYQLETSLVFGIIMLIVFYALFQVLEW 60

Query: 61  VSRFFLSCPAMLFHML----HKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVS--QQ 113
           +    ++   +L         +R   K +  +  G ++IA  + P A R M       + 
Sbjct: 61  LVITVINL--LLRSRFIPQHWRRRSAKKHTLI--GALAIAEEDWPAAERAMIKGADNGEL 116

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169
              +        + Q  +AER   +A  + + M         TR          +    D
Sbjct: 117 PALNLLAAARAAQHQNKIAERDQYLARAEAQPMTANAVATTRTRYLLKQGELTLARAELD 176

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220
                + A  +   +P         ++ Y   ++W               L+  K NA  
Sbjct: 177 -----KLAPTSKSKAPVLKLA----LELYCAQEDWEALKLLLPILKKRQILDDAKLNALS 227

Query: 221 WNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              + A+L  A     +  ++     S  +     +     +      A  L   N+K +
Sbjct: 228 VETHCALLKAASLKGEDALEQCWQWLSRDE-----RNQPEFL---AIYAMGLCRFNRKDQ 279

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A  +L K  + +P   +  +   +++ +     K+ L+ E  ++ + +    ++ +  + 
Sbjct: 280 ALKLLSKKLRSSPESALLEVIPQIVTAHDEEIRKQLLKHEITHENNADYQKCLALLYQQT 339

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
             + +A        ++AP +  +L LA+I++             + A++
Sbjct: 340 RDMKEAKTCWQNVCRLAPSQASWLSLARIQE-QLGEQGNANQSYRQAVN 387


>gi|114561624|ref|YP_749137.1| HemY domain-containing protein [Shewanella frigidimarina NCIMB 400]
 gi|114332917|gb|ABI70299.1| HemY domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 389

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 146/400 (36%), Gaps = 29/400 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++ + Y  +I + +C   ++      + I  G     TS    +  L  F FA  LL  
Sbjct: 1   MIKTLVYVVLILIGLCISPLIIGQSGYIYIAIGEYQIETSLVTGIVGLIVFYFALQLLEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYT-GLMSIAAHNIPLARK-MHSYVSQQHTFHN 118
           +    L+        L ++   K  K     G +++A  + P A K M     +      
Sbjct: 61  LIILLLNIVLS-SRYLPEQWRRKAAKKHTLIGALALAEEDWPAAEKAMAKGAEKGEI--- 116

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-----YSLYFESCRIGDLNSA 173
             L      + A  +     A +      +     + AV       L  +    G+L  A
Sbjct: 117 PVLNLFAAARAAHYQGD-ITARDHYLTQAEKNPIAKTAVYTSRTRYLMKQ----GELVKA 171

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWN----RNR 225
           +    K    S  +  V +   + Y+  ++W      L     ++     E+N    +  
Sbjct: 172 RAILDKLNPTSKSSSPVLKLAQELYLQQQDWQALKLLLPILKKRQLLAETEFNQLNTKTN 231

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +IL+I  +     + ++   +H   +S +  D  I+A    A+ LI    K +A  ++ K
Sbjct: 232 SILMINAAK--ISEAELTKCWHWLNKSERKEDELILA---YARGLIQYGHKDQALKLINK 286

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
               +P   +      L++       K   +LE  ++   +  + ++K+A++     QA 
Sbjct: 287 QLNASPSAALFTAIPDLITAQDQDIRKLLSKLETTHENDADYQMCLAKLAIQSRETKQAK 346

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
                  +IAP  + +L LAQ ++    N+     +  +A
Sbjct: 347 THWQNVCRIAPTHQSWLALAQTQEQLGENSTAAHSYRNAA 386


>gi|320326721|gb|EFW82766.1| hemY protein [Pseudomonas syringae pv. glycinea str. B076]
          Length = 414

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 129/371 (34%), Gaps = 22/371 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  V     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++     +  L Y+   + A  + +Y      
Sbjct: 84  RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD   A        +  P  P V   + + Y 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A          + L A           + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A++Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLAHLYGLVRGSDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364
            +L+ A    + +      L+ + +I L+     +A      ++++        E+  LL
Sbjct: 320 KQLQMAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379

Query: 365 AQIEQANSHNT 375
           AQ+ + +  NT
Sbjct: 380 AQLGETDRSNT 390


>gi|261250038|ref|ZP_05942615.1| HemY-like protein [Vibrio orientalis CIP 102891]
 gi|260939542|gb|EEX95527.1| HemY-like protein [Vibrio orientalis CIP 102891]
          Length = 395

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 131/401 (32%), Gaps = 15/401 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RLI  F V+ L + +    S     V I+  ++    S   ++  +   L     L  
Sbjct: 1   MFRLIFLFVVLGLGLFAGTQFSGQQGYVLISVASKTIEMSVTTLVIFVIAALAGLFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +      +  ++    R   +  +    G++ +   +  +A K  +  +  H      
Sbjct: 61  LVKKAFYASSATWNYFSVRKMRRSRRYTNEGIIKLLEGDFKVAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          ++   +         AV        +  R  D ++A    
Sbjct: 119 LCYLVASEAAQGMGNNEQ-RDRYLELAAKQDNSTLAVELTR--AKQLIREADYSAAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           +      P+   V   + Q Y+  K W   +  L +  K+       +  L   R+    
Sbjct: 176 SSLKSSYPNNTIVLNLLKQVYIELKLWQPLLDLLPKLVKHKIILKEEQEPL-TQRAQCGL 234

Query: 238 DKGDMIASYHDAIESLKLC-DNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNPH 292
                     + + +        + A        AK LIS+    +A  +L++  K +P+
Sbjct: 235 LHEVAAQKGSEGLIAHWNSLPRKVKADTHLIECFAKQLISRQADSEAFTLLKETLKKHPN 294

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            ++  +   L   ++   +     + + +  +  +   +++  L       A      A+
Sbjct: 295 SDLYALLPKLKLTDSHPAVVFLEGVLQKDGNNAGAHSALAQFYLREEKWSDAQGHFEKAL 354

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            +      +  L+   +  +  T      ++ AL  + +P 
Sbjct: 355 SVRSSVSDYGYLSDALEKQNL-TKAAHEVSKKALTLINEPA 394


>gi|170691939|ref|ZP_02883103.1| HemY domain protein [Burkholderia graminis C4D1M]
 gi|170143223|gb|EDT11387.1| HemY domain protein [Burkholderia graminis C4D1M]
          Length = 396

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/402 (11%), Positives = 118/402 (29%), Gaps = 47/402 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++  +     +V       V + +       S  + +  L         L  
Sbjct: 3   IRGLLWLALLFTIAVVLAVVGRFDMGQVLLVYPPYRIDMSLNLFVVGLVVLFILLYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
           + R     P  +     +    K + AL   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122

Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
                   H  H          QI  A   +  A      ++     R            
Sbjct: 123 GLIAAAAAHRMHEYARRDEWLAQIDEA--DWQDAR-----LMATADMRADGR-------- 167

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221
              D + A     +            + +++     K W   +  +     ++  +    
Sbjct: 168 ---DADGALAALKEMQSQGGRRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280
            R R +       +     D +    +++    +        +  AA+ L++ N+ ++A 
Sbjct: 225 VRLRQLAAENLLRDRRHNADALLELWNSLTPTERHSPRL---ADLAAELLVALNRPQEAR 281

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            I+E+    N    +   Y      + +  +++A   ++   +  + L  + ++ L    
Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEGWQKDRPDDADLLFALGRLCLHQQL 341

Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKI 378
             +A +    A+K+A  +         LA++ +    + +K 
Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHE-QLGDAEKA 382


>gi|298368862|ref|ZP_06980180.1| HemY family protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282865|gb|EFI24352.1| HemY family protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 406

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/382 (13%), Positives = 117/382 (30%), Gaps = 24/382 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + ++ +   +    Y  +V +  G  + R +    +  L   +     L  
Sbjct: 1   MRSVVWIVILFAVAVGLALASGVYTGNVYVVAGQTMLRMNLHAFVLGLIIAVVILYFLVR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
           +    L+ P  +      R   +   AL     +        A    + V        N 
Sbjct: 61  LIAGLLNIPGRMQRFGTARKGRQAATALNNAGQAFFEGKFEQAENEAAKVLANKEAGGNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L+ +  +P  ++ + Y L  E +    D  +A++   
Sbjct: 121 ALALMLGAHAADQMDNIELRDRYLKDIEALPKKQQLSRYLLLAESALTNRDYPAAKQNLD 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  I+P+        +Q      +   A   L + +K        +A  +     E   
Sbjct: 181 AAAQINPNL--TRLVRLQLRYAFDD-GNAAEVLEKSEK------LEKAGAISDYEAEQYQ 231

Query: 239 KGDMIASYHDAIES--LKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILEKIWKV 289
                     A ++  LK C   I  +       +  A+         +A   +++ +  
Sbjct: 232 SWAYRRLLASAADADGLKSCLKRIPENLKSGGLCVEIAEKYERLGLYGQAVKWVDRYYPQ 291

Query: 290 NPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
               E+   +      L        +  A    +   ++ + L+ + ++A       +A 
Sbjct: 292 TQQIELLEPFVDSVRYLSDREQQQAIDTADSWLQTRPDNAKLLMYLGQLAYGKRLWGKAQ 351

Query: 346 AKAMLAMKIAPRKEIFLLLAQI 367
                ++ I P     L LA++
Sbjct: 352 GYLEASIAIKPTVSARLALAKV 373


>gi|187923072|ref|YP_001894714.1| HemY domain protein [Burkholderia phytofirmans PsJN]
 gi|187714266|gb|ACD15490.1| HemY domain protein [Burkholderia phytofirmans PsJN]
          Length = 396

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/415 (11%), Positives = 127/415 (30%), Gaps = 56/415 (13%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++ ++     +V       V + +       S  + +  L         L  
Sbjct: 3   IRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDISLNLFVVGLVVLFILIYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
           + R     P  +     +    K + AL   + ++ A     A K               
Sbjct: 63  IFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122

Query: 113 ------------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
                       ++   +E+L  + E         +  A      ++     R       
Sbjct: 123 GLIAATAAHRMHEYARRDEWLSQIDEA-------DWQDAR-----LMATADMRADGR--- 167

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKK 216
                   D + A    T+            + +++     K W   +  +     ++  
Sbjct: 168 --------DADGALTALTQMQSQGGRRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAI 219

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNK 275
           +     R R +       +     D +    +++ +  +        +  AA+ L++ N+
Sbjct: 220 HPAVAVRLRQLAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADLAAELLVALNR 276

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            ++A  I+E+    N    +   Y      + +  +++A   ++   E  + +  + ++ 
Sbjct: 277 PQEARKIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEGWQKDRPEDADLMFALGRLC 336

Query: 336 LEMGSIDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           L      +A +    A+K+A  +         LA++ +          ++ +SAL
Sbjct: 337 LHQQLWGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDAEKASQHYRESAL 391


>gi|253991601|ref|YP_003042957.1| protoheme IX biogenesis protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253783051|emb|CAQ86216.1| bacterial HemY porphyrin biosynthesis protein [Photorhabdus
           asymbiotica]
          Length = 402

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 113/374 (30%), Gaps = 27/374 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I   N    TS   +  I          L    R  +   +        R 
Sbjct: 21  VAGHQGYVLIQTDNYNIETSVTGLFIIFILLQLVLCFLGWCYRRVMRTSSRTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +        L+ +A  +     ++ +  +         + YLL  + A         +
Sbjct: 81  RSRARAQTKEALIKLAEGDFKQVEQLLTRNADHA--EQPVINYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR              G++++A+    K L+ +P  P V  
Sbjct: 139 QYLERAAEVADNNQLPVDITRV-------RIQLAQGEIHAARHGVDKLLNQAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              Q Y  +      I  L      +  +  + +R R    I    +   +         
Sbjct: 192 LAEQAYTRSNAHQSLIDILPTMEKIRLHDELQIHRLRQQAYIGLMNQYMAEQGSEGLKRW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             +  +   + +   +  ++ LI  +    A+ I+ +  K      +  +   L SE+  
Sbjct: 252 WHDQNRKIRHDVALQVAISEHLIECDDHETAQKIILESLKRQYDERLLLLIPRLKSEDPT 311

Query: 309 GKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
              K    L+   K+   + ++   + +IAL  G  +QA      A+   P    +  LA
Sbjct: 312 PIQK---ALDHQLKQHDATPLLNSTLGQIALRHGQWEQATKDFKAALAQRPDAHDYAWLA 368

Query: 366 QIEQANSHNTDKIL 379
                     +   
Sbjct: 369 DALDKLRKPEEAAQ 382


>gi|296313854|ref|ZP_06863795.1| HemY family protein [Neisseria polysaccharea ATCC 43768]
 gi|296839584|gb|EFH23522.1| HemY family protein [Neisseria polysaccharea ATCC 43768]
          Length = 407

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/398 (13%), Positives = 124/398 (31%), Gaps = 14/398 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
                         LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 LLADADDAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRRLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387
           + + P     L+LA++  E   +   +        A+ 
Sbjct: 358 IALQPSVSARLVLAKVFDETGETQKAEAQRNLVLEAVS 395


>gi|325137817|gb|EGC60392.1| hypothetical protein NMBES14902_1440 [Neisseria meningitidis
           ES14902]
          Length = 405

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 113/367 (30%), Gaps = 14/367 (3%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           Y  DV I  G  + R +    +  L   +  W  LF      L+ P  +      R   K
Sbjct: 24  YTGDVYIVLGQTMLRINLHAFVLGLLIAVVVWYFLFKFVIGILNIPEKMQRFSLARKGRK 83

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEYLVYLLEVQIALAERQYNIAHEK 142
               L    ++        A    S V        N  L  +L    A       +    
Sbjct: 84  AALYLNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMGNTELRDRY 143

Query: 143 LEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           L  + ++P  ++ + Y L  E +    D  + +     A  ++     +    ++     
Sbjct: 144 LAEIAKLPEKQQLSRYLLLAESALNRRDYETVEANLHAAAKMNAGLTRLVRLQLRYAFER 203

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI- 260
            +   A+  L + +K +K      +     ++     +    A        LK   +S+ 
Sbjct: 204 GD---ALEVLAKTEKLSKAGALGESETKQYQNWAYRRQLADAADAAALKTCLKRIPDSLK 260

Query: 261 --MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRA 314
               S+  A+          A   +++ +  N  PE+   +      L   +    +  A
Sbjct: 261 NGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFA 320

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI--EQANS 372
               +   ++   L+ + ++A       +A      ++ + P     L+LA++  E    
Sbjct: 321 DAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEP 380

Query: 373 HNTDKIL 379
              +   
Sbjct: 381 QKAEAQR 387


>gi|328953733|ref|YP_004371067.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454057|gb|AEB09886.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 808

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 112/310 (36%), Gaps = 29/310 (9%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNI 138
             KG  A    ++  +   +  A K+ S V +++         + LL    AL+++    
Sbjct: 342 QAKGRMA----MVHASRGRVAEAEKLASEVLKENPKDMVATRTMGLL----ALSKKDGLA 393

Query: 139 AHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           A     ++ Q     P  R      L        +L  A+  A KAL++  D       +
Sbjct: 394 AVNNFRLITQDQPQNPEARLL----LAQAHLVNNELEQAKEQAKKALELKADYLEARRFL 449

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              Y+  K++  AI  +    +    +N      L+A       K D+  +     + + 
Sbjct: 450 YGLYLRNKDYDGAIQTIQGYLR----YNEKDLFNLLALGEVYLAKEDLAKARATFQKVIA 505

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVG 309
           L   + +     A+  + Q +  +A   L++  + +P+       +  IY  L  +  V 
Sbjct: 506 LDPKNPIGYFELARMELKQKQTDQAVKHLKQALEQDPNFIKGLQLLTAIY--LEQDKPVQ 563

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            ++   +    +  +   L ++ +I L     D+A      A  I PR+   L L  I  
Sbjct: 564 AVEVLRQSLARSPNNPVILQMLGEIFLAQKKSDEAAQALEKAFTINPRQLSALRLLVIAY 623

Query: 370 ANSHNTDKIL 379
             + + DK+ 
Sbjct: 624 QQNPDVDKVK 633



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 104/294 (35%), Gaps = 42/294 (14%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAV- 157
             L   +      +     +Y VYL++ Q+    +    A   LE  +   P + E  + 
Sbjct: 148 GKLEAAIEKLQEAKQLDPKKYEVYLIQAQMESNRKNLERAVAILEEGIKANPDSEELLLA 207

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                ++ +      A++Y  +A+ + P    +   + + Y+LA +  +A   L+Q+   
Sbjct: 208 RGRVADAQKQ--FPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQALHQQLGL 265

Query: 218 AKEWNRNRAILLI-------------ARSLENADKGDMIASYHDAIESLKLC-------- 256
             + N   A+ L                  + A K     +   A+    L         
Sbjct: 266 EPD-NEKHAVALTKFLVGRGKVKEGEQVLKDFAAKHPDNNAARFALADFYLSRRQEGRGL 324

Query: 257 -------------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYT 300
                         + + A    A    S+ +  +AE +  ++ K NP   +A       
Sbjct: 325 KTLQEIVDRDPTGPSGLQAKGRMAMVHASRGRVAEAEKLASEVLKENPKDMVATRTMGLL 384

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            L  ++ +  +     + +   ++ E+ +++++  L    ++QA  +A  A+++
Sbjct: 385 ALSKKDGLAAVNNFRLITQDQPQNPEARLLLAQAHLVNNELEQAKEQAKKALEL 438



 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 86/225 (38%), Gaps = 19/225 (8%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD   A+     A+ I P        V +  +  + +  A   L+Q  +   + 
Sbjct: 40  KELYDKGDYVRARLQFKNAVQIDPKYAESFLWVAKTEIKLQNYRGAFGALSQAAE--LDP 97

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A +L+ R   +  + D   +      +L+L   +    + AA    +Q K   A  
Sbjct: 98  KLLEAQILLGRIYLSGKRLDEAEARLK--TALELAPKNSDVLLLAASLAAAQGKLEAAIE 155

Query: 282 ILEKIWKVNPHPEIANIYT-HLLSENTVGKLKRALRL----EEINKESVESLVIVSKIAL 336
            L++  +++  P+   +Y      E+    L+RA+ +     + N +S E L+   ++A 
Sbjct: 156 KLQEAKQLD--PKKYEVYLIQAQMESNRKNLERAVAILEEGIKANPDSEELLLARGRVAD 213

Query: 337 EMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQANSH 373
                 +A    + A+K+ P+           ++L  Q+++A   
Sbjct: 214 AQKQFPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQA 258



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 7/182 (3%)

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +A ++ P        + + Y+  K    A      + K A E     + +L+  +   A 
Sbjct: 91  QAAELDPKLLEAQILLGRIYLSGKRLDEA----EARLKTALELAPKNSDVLLLAASLAAA 146

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---I 295
           +G + A+     E+ +L        +  A+   ++    +A  ILE+  K NP  E   +
Sbjct: 147 QGKLEAAIEKLQEAKQLDPKKYEVYLIQAQMESNRKNLERAVAILEEGIKANPDSEELLL 206

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A        +      K  L   ++  +       +++  +  G +D+A       + + 
Sbjct: 207 ARGRVADAQKQFPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQALHQQLGLE 266

Query: 356 PR 357
           P 
Sbjct: 267 PD 268



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 52/373 (13%), Positives = 109/373 (29%), Gaps = 107/373 (28%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             GL++++  +   A      ++Q           LL  Q  L   +   A E+ +  L+
Sbjct: 380 TMGLLALSKKDGLAAVNNFRLITQDQ--PQNPEARLLLAQAHLVNNELEQAKEQAKKALE 437

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           + A    A   LY    R  D + A +     L  +    +   A+ + Y+  ++ ++A 
Sbjct: 438 LKADYLEARRFLYGLYLRNKDYDGAIQTIQGYLRYNEKDLFNLLALGEVYLAKEDLAKAR 497

Query: 209 TFLNQ---------------KKKNAKEWNRNRAILLIARSLEN---------------AD 238
               +                +   K+   ++A+  + ++LE                 +
Sbjct: 498 ATFQKVIALDPKNPIGYFELARMELKQKQTDQAVKHLKQALEQDPNFIKGLQLLTAIYLE 557

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------------ 286
           +   + +     +SL    N+ +      +  ++Q K  +A   LEK             
Sbjct: 558 QDKPVQAVEVLRQSLARSPNNPVILQMLGEIFLAQKKSDEAAQALEKAFTINPRQLSALR 617

Query: 287 -----WKVNPHPEIANIYTHLLSENTV-------------GKLKRALR------------ 316
                ++ NP  +   +     + +                +LK   +            
Sbjct: 618 LLVIAYQQNPDVDKVKMELEAKTNDPKAPPFYILAQAMFYERLKDYNKASEVYNRMIERN 677

Query: 317 ----LEEIN-----------KESVESLVIVSKIALE------------------MGSIDQ 343
               L + N            E+ +  + +   ALE                   G   Q
Sbjct: 678 LFPILAKNNLAYLLANHLQSPENYQKALTLVSEALEESPEDPNILDTKGWILCQQGDFPQ 737

Query: 344 AHAKAMLAMKIAP 356
           A      A +IAP
Sbjct: 738 AVTYLEQATEIAP 750



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 5/137 (3%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA----VYSLYFESCRIGDLNSAQ 174
                L +       + YN A E    M++       A     Y L        +   A 
Sbjct: 646 PPFYILAQAMFYERLKDYNKASEVYNRMIERNLFPILAKNNLAYLLANHLQSPENYQKAL 705

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
              ++AL+ SP+ P + +          ++ +A+T+L Q  + A      +  L    + 
Sbjct: 706 TLVSEALEESPEDPNILDTKGWILCQQGDFPQAVTYLEQATEIAPNNPALKYHLAYCLAK 765

Query: 235 ENADKGDMIASYHDAIE 251
              DK   I +    +E
Sbjct: 766 -LGDKEKAIGTLEKLLE 781


>gi|308188848|ref|YP_003932979.1| Protein hemY [Pantoea vagans C9-1]
 gi|308059358|gb|ADO11530.1| Protein hemY [Pantoea vagans C9-1]
          Length = 398

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 129/385 (33%), Gaps = 9/385 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML++   F ++   +    +++ +   V I   N    TS   ++ IL   L   + +  
Sbjct: 1   MLKVFILFILLIAGVVLGPMIAGHQGYVLIQTDNWNIETSVTGLVIILIISLLVILAVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  L   A        R   +  +   + LM +A  +     K+ S     H      
Sbjct: 61  LLRRVLHTGARTRGWFTGRKRRRAQRHTQSALMKLAEGDHRQVEKLLSK-DADHA-DVPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179
             YLL  + A        A++ LE   ++  +    V  +         + ++A+    +
Sbjct: 119 ANYLLAAEAAQQRGDEIRANQHLERAAELSESNTIPVEIARARIQLARNEDHAARHSIDR 178

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNR---NRAILLIARSL 234
            L+++P  P V     Q YV    WS  +  L   +K     E +R    +   L   + 
Sbjct: 179 LLEVAPRHPEVLRLAEQAYVRTGAWSALLDILPAMQKAQVGDELHRDALQQQAWLGLMNQ 238

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
             AD+G        +  S K   +     +  A  LI  N    A+ I+ +  K +    
Sbjct: 239 AMADQGSDGLKRWWSTLSRKTRQD-TTLQVAMADHLIECNDHDTAQSIVLEGLKRHYDDR 297

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +   + S N     K   +  + +  +      + ++ +  G   QA      A+  
Sbjct: 298 LVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAADALQQALAQ 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379
            P    +  LA +        +   
Sbjct: 358 RPDAFDYAWLADVYDRLHRPEEAAK 382


>gi|227325805|ref|ZP_03829829.1| putative protoheme IX biogenesis protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 397

 Score = 77.7 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/365 (13%), Positives = 116/365 (31%), Gaps = 9/365 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I   N   +TS   ++ +L  F  A++ +  V R      +        R 
Sbjct: 21  VAGHQGYVLIQTDNYDIQTSVTGLVIMLVLFFLAFLAVEWVLRRIFRTGSRTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A          
Sbjct: 81  RTRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +         + ++A+    K L+++P  P V     Q ++
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254
               +S  +  L   +K    +   R + L  ++      +    G             +
Sbjct: 199 RTHAYSALLDILPAMRKINL-YPEARLLDLQQQAYIGLMNQAMADGGSEGLKLWWNNQSR 257

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I   +   + L+  +    A+ I+    K      +  +   L + N     K  
Sbjct: 258 KVRHEIPLQVTMVEHLLECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKVL 317

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            +  +    +      + ++ ++ G   QA      A+++ P    +   A         
Sbjct: 318 HQYIKQQGATPLLSSTLGQLLMKHGEWQQASDAFRTALELRPDAYDYAWRADALDRLRLP 377

Query: 375 TDKIL 379
            +   
Sbjct: 378 DEAAQ 382


>gi|325131986|gb|EGC54685.1| hypothetical protein NMBM6190_1290 [Neisseria meningitidis M6190]
          Length = 405

 Score = 77.7 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D   ++    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEVSEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  +  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|91774388|ref|YP_544144.1| HemY-like protein [Methylobacillus flagellatus KT]
 gi|91708375|gb|ABE48303.1| HemY-like protein [Methylobacillus flagellatus KT]
          Length = 393

 Score = 77.7 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 121/358 (33%), Gaps = 15/358 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  LI   F+++L I   ++  +    V I         S  ++L ++     +  LL  
Sbjct: 1   MRVLIWILFILALAIGVSLLAGNNEGYVLIVRPPYRLELSLNLLLILIVLAFVSLHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
              +    PA +      R    G+ AL   L +++     LA K  +         +  
Sbjct: 61  FIHYARDLPANVRAYKENRRIRLGHAALLEALHAMSQGRYQLALK--AASKALDYGEDPS 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178
           L  LL  + +    +     +      +  A        L      + D   + A     
Sbjct: 119 LTALLAARASHKL-KQKGQRDYYLAEAERLAPEAAVARLLMQAELLLDDRLYSQALDVLH 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENA 237
           K   I P         ++  +    W + +T L Q +K+   E  + R I   A     A
Sbjct: 178 KIEKIEPRFVPAMRLELKVQLRLNNWEQVLTLLQQLEKHDGMESWQVREIRHQAHQHLIA 237

Query: 238 DKGDMIASYHDAIESLKLCDNS-IMASICAAKSLISQNKKRKAEVILE----KIWKVNPH 292
                + +     + +   D      +   A++LI  N   +A+ ++E    K W     
Sbjct: 238 RYSKDLNALMAYWKKVPEDDKLNTRIANIMAEALIKLNAGNQAQEVIEMSLTKTWDS--- 294

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            E+A       S N   +L++A      +++  + L+ + K+ + +G   +A +    
Sbjct: 295 -ELAGKLGDCASTNPHKQLQQAEHWLLSHEQDAQLLLSLGKMCVRLGLWGKAQSYLEA 351


>gi|300312226|ref|YP_003776318.1| porphyrin biosynthesis protein [Herbaspirillum seropedicae SmR1]
 gi|300075011|gb|ADJ64410.1| porphyrin biosynthesis protein [Herbaspirillum seropedicae SmR1]
          Length = 399

 Score = 77.7 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 116/398 (29%), Gaps = 33/398 (8%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++++ +   +        +++   P +V + +       S    +  +        ++  
Sbjct: 1   MKILLWLLTLFASAIGLAVLARFNPGNVVLFYPPYRIDLSLNFFIFAVLAVFLVIYVVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P  +      +  ++  KAL   L +        A K  +  S      N  
Sbjct: 61  AIRLTQKLPGRVIAYRRAKRENESNKALRDALKAYFEGRFGQAEKSATRAS--DLPDNAG 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYA 177
           +  L+  + A  + + +     +      ++  T +   + +             A    
Sbjct: 119 IAALIGARAAHRMRQGER---RDIWLASTEVDPTLKAARLMTALELQVDEHHFKQALETV 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARS 233
            +            +  ++    AK W   +  +     +   +    NR R    ++  
Sbjct: 176 EELNANGTRHIQALQWALKANQQAKNWPEVLRLVQTLDKRNALHPALSNRLR---EMSYD 232

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILE----KIWK 288
              +D+     S      ++   D      ++ AA++  S+    +A  +LE      W 
Sbjct: 233 ALLSDRSHDAESIRLLWNAVPSADKLKPYIAVRAAQAFSSRGLHDEARSLLERGLAADWD 292

Query: 289 VNPHPEIANIYTHLLSENTVGKL----KRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +     +   Y    +E     L    +        N    E  + +    L      +A
Sbjct: 293 IR----LLRAYRESTAEAGSPALLSQIEHCESWLSKNPTDAELALTLGMFCLRQKLWGKA 348

Query: 345 HAKAMLAMKIA--PR--KEIFLLLAQIEQANSHNTDKI 378
                 A+  A  PR  +E  L LAQ+ +A        
Sbjct: 349 QRHLEQALSDAIEPRTVRESHLALAQLHEALDQPDQAA 386


>gi|255743929|ref|ZP_05417884.1| HemY-like protein [Vibrio cholera CIRS 101]
 gi|262151168|ref|ZP_06028307.1| HemY-like protein [Vibrio cholerae INDRE 91/1]
 gi|262167038|ref|ZP_06034755.1| HemY-like protein [Vibrio cholerae RC27]
 gi|255738412|gb|EET93802.1| HemY-like protein [Vibrio cholera CIRS 101]
 gi|262024556|gb|EEY43240.1| HemY-like protein [Vibrio cholerae RC27]
 gi|262031062|gb|EEY49687.1| HemY-like protein [Vibrio cholerae INDRE 91/1]
          Length = 382

 Score = 77.3 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 109/361 (30%), Gaps = 18/361 (4%)

Query: 22  SHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           +     V I+  NR    S    ++ I+      + L F V +   +      +    R 
Sbjct: 6   AGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEFLVKKILYTSFHTW-NWFSVRK 64

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  +    G++ +   +   A K  +  +  H      L YL+  + A          
Sbjct: 65  QRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMPLLCYLVASEAANGMGDRAK-R 121

Query: 141 EKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           ++   +         AV  L     +   GD  +A    T+     P    V   + Q Y
Sbjct: 122 DRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETLTQLQRNHPHNTVVLNLLKQCY 180

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-----KGDMIASYHDAIESL 253
               EW   +  L +  K  +  N     L I             KG      H A  S 
Sbjct: 181 QALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGILQDIASPKGSEGLMQHWAQLSR 240

Query: 254 KLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           KL      +M  I     LI +    +A  ++++  K    PE+  +   L   +    +
Sbjct: 241 KLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQATPELYALLPELNISDRHPLI 297

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
                    +  + E+   + ++ L       A      A+ +      +  LA   +  
Sbjct: 298 ALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEKALSLRSSVSDYAYLADALEKQ 357

Query: 372 S 372
           +
Sbjct: 358 N 358


>gi|119776389|ref|YP_929129.1| HemY protein [Shewanella amazonensis SB2B]
 gi|119768889|gb|ABM01460.1| HemY protein [Shewanella amazonensis SB2B]
          Length = 388

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 68/411 (16%), Positives = 145/411 (35%), Gaps = 46/411 (11%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++ + Y  +I + +C    +      + ++       TS    + +L       ++   
Sbjct: 1   MIKTLIYLGIILIGLCLSPYIVGNTGYLYLSAWGYEIETSLVFAIVVLVIAYGVIVIAEW 60

Query: 61  V----SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115
           +        L    +       R        L  G +++A  N P A + M    ++   
Sbjct: 61  IAVKSISLVLGSRYLPERW---RRNAAKRHTL-NGALALAEENWPDAERFMAKGAAKGEL 116

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSA 173
                L      Q    + +Y    + LE  +  P   T  F   + Y            
Sbjct: 117 PALNLLAAARAAQ---HQGKYAERDDYLEKAVTEPNAATAVFTTRTRYLLKQ------GQ 167

Query: 174 QRYATKALD-ISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNA-------KEWN 222
              A  AL+ ++P +      +   ++ Y+  ++W      L   KK+A       ++ +
Sbjct: 168 LERARTALNHLAPTSKSSAAVIKLAMEVYLAQQDWRAVRELLPAIKKHALLNDANFEDLS 227

Query: 223 RNRAILLIARSL----ENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              ++ L+ ++     ++ DK     S     + + +            A  L  Q KK 
Sbjct: 228 VRVSVKLLEQAGSKDWDSLDKEWQWLSRSEKQLSANRAA---------YALGLAKQGKKA 278

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           +A  +L K  +  P P++  +   +L+       ++ L+L    ++  E    V+++  +
Sbjct: 279 EAVKLLLKDLESLPDPQVLALLPQVLNGQDEAPRQQLLKLAPRFEDVHEYHECVARLCQQ 338

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                 A+     A ++ P KE +L LA++++    NTD  L   + A  A
Sbjct: 339 AREFKTAYEHWRKACELNPSKENWLALAELDE-QLGNTDLALQHYRRAAKA 388


>gi|304398145|ref|ZP_07380020.1| HemY protein [Pantoea sp. aB]
 gi|304354431|gb|EFM18803.1| HemY protein [Pantoea sp. aB]
          Length = 398

 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 129/385 (33%), Gaps = 9/385 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML++   F ++   +    +++ +   V I   N    TS   ++ IL   L   + +  
Sbjct: 1   MLKVFILFILLIAGVVLGPMIAGHQGYVLIQTDNWNIETSVTGLVIILILSLLVILAVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  L   A        R   +  +   + LM +A  +     K+ S     H      
Sbjct: 61  LLRRVLHTGARTRGWFTGRKRRRAQRHTQSALMKLAEGDHRQVEKLLSK-DADHA-DVPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179
             YLL  + A        A++ LE   ++       V  +         + ++A+    +
Sbjct: 119 ANYLLAAEAAQQRGDEARANQHLERAAELSENNTIPVEIARARIQLARNEDHAARHSIDR 178

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNR---NRAILLIARSL 234
            L+++P  P V     Q Y+    WS  +  L   +K+    E +R    +   L   + 
Sbjct: 179 LLEVAPRHPEVLRLAEQAYIRTGAWSALLDILPSMQKSQVGDELHRDALQQQAWLGLMNQ 238

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
             AD+G        +  S K   +     +  A  LI  +    A+ I+ +  K +    
Sbjct: 239 AMADQGSDGLKRWWSTLSRKTRQD-TTLQVAMADHLIECDDHDTAQSIVLEGLKRHYDDR 297

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +   + S N     K   +  + +  +      + ++ +  G   QA      A+  
Sbjct: 298 LVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAADALQQALAQ 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379
            P    +  LA +        +   
Sbjct: 358 RPDAFDYAWLADVYDRLHRPEEAAK 382


>gi|311105079|ref|YP_003977932.1| HemY, N-terminal domain-containing protein [Achromobacter
           xylosoxidans A8]
 gi|310759768|gb|ADP15217.1| HemY, N-terminal domain protein [Achromobacter xylosoxidans A8]
          Length = 540

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/370 (13%), Positives = 116/370 (31%), Gaps = 16/370 (4%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           +  +V +         S  + + ++        +   +  + L+ P  +     KR   +
Sbjct: 24  HSGNVLLLVWPWRINMSLTLAVLLIVAAFIVLYVGLRLLAWLLAIPDRVRAWRGKRAQAR 83

Query: 84  GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
            ++ L  G + +       A K +   + Q        L  L   +      +++   ++
Sbjct: 84  DHELLERGWIGLLEGRYTTAEKDLTKLLDQTKVQTRRVLAALSAARATHGLGEFDR-RDR 142

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD-ISP------DAPWVTEAVV 195
           L    Q  A  +  +  +   +    D+   Q  A +AL  + P              ++
Sbjct: 143 LLATAQEQAGTDAGL--IEATATVSADMLLDQGRAERALGVLEPLADGGARHLHTMRLLL 200

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI---ARSLENADKGDMIASYHDAIES 252
           + +         +  L +         R  A LLI     +   A       ++    + 
Sbjct: 201 RAHTALHH-DEQVFTLARGLVRRNALARAEADLLIDASGAARLRAAAAGGSEAWRAIWKD 259

Query: 253 LKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           LK  +  +   ++  A +  +  +  +A  +LE    V  +P +   Y    +E    +L
Sbjct: 260 LKAEERLLPEIALAGAAAFEAVGEASEAARVLEAAVAVKFNPALVAAYARCEAEQVSRRL 319

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
            RA    +      + L  +  + L      QA    + ++      +   LL  +    
Sbjct: 320 ARAETWLQQRPTDPDLLTALGMLCLNGQLWGQAERYLLRSLSRRSDAQTHALLGSLYDRL 379

Query: 372 SHNTDKILYW 381
               D + +W
Sbjct: 380 ERPADAVRHW 389


>gi|54310584|ref|YP_131604.1| protoheme IX synthesis protein HemY [Photobacterium profundum SS9]
 gi|46915027|emb|CAG21802.1| hypothetical HemY protein [Photobacterium profundum SS9]
          Length = 395

 Score = 76.9 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 54/416 (12%), Positives = 119/416 (28%), Gaps = 51/416 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++L+     +   I    +++     V I+  N+    S   ++ ++      + L+  
Sbjct: 1   MIKLLLLVAALIAGIVVGPMLAGNQGYVLISAANQTIEMSLTTLILLVVVLFGVFFLVET 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  LS  +        R   K       GLM +   +   A K+    ++     +  
Sbjct: 61  ILKRLLSASSSTRGWFSGRKVRKARIQTSNGLMKVIEGDWKQAEKLVVKSAKH---SDTP 117

Query: 121 LVYLLEV------------------QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           L+  L                    Q A  +   ++A       LQ            Y 
Sbjct: 118 LLNYLAAAQAAQGQGNATLRDEYLQQAAELD-DNSLAVALTRAKLQ------------YR 164

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++        A          +   P +   +   Y+  ++W   +  L Q +K      
Sbjct: 165 QAQ----YEQALATLQDIKQNNNRNPILLALLKDCYIQLEDWQPLLRLLPQLEKTGVLTA 220

Query: 223 RNRAILLIARSLENADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNK 275
           +    L +             +     +          K     I    C  K +I +  
Sbjct: 221 QQATELELQAECGLMAHIGQHSGSDGLMGHWNTLSRKAKQRPELI---CCFVKEMIKRKA 277

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             +A  +L    K    P + ++   L   +    + R   L   +  +  +   + ++ 
Sbjct: 278 DSEAYTVLCDSLKKQTDPRLISLVAELNLPDVHPAIVRLQDLLRFDSSNPATHSALGQLF 337

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI---LYWTQSALHA 388
           +     ++A      A+K+ P    +  L ++      N             AL A
Sbjct: 338 IREQKWEEAKTHFEQAIKLGPTVSDYAYLVEVLDKLDDNQGAADVSRQALTLALPA 393


>gi|325981151|ref|YP_004293553.1| HemY domain-containing protein [Nitrosomonas sp. AL212]
 gi|325530670|gb|ADZ25391.1| HemY domain protein [Nitrosomonas sp. AL212]
          Length = 391

 Score = 76.9 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 46/401 (11%), Positives = 122/401 (30%), Gaps = 61/401 (15%)

Query: 2   LRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++LI +   +        + + +     S+              + ++      +  L  
Sbjct: 1   MKLIVWLIALFAAAVVVTLTAKHITGHASLVMPPYQLELPLDQFIIVVIVAFLVFYFLVR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-E 119
           ++               +  + K  + L +GL +    +   A+K  +   +       +
Sbjct: 61  LTLGIFG-------FSKRHRHKKTDEMLLSGLKAYFEGDFVKAQKNAAVALKLANSATVK 113

Query: 120 YLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFES---CRIGDLNSAQ 174
            +  ++  + A    Q   A ++     + Q+P  +      L  ++      G+   A 
Sbjct: 114 AISAVIAARSAHKLNQ-VNARDQYLNNALNQVPGEKSL---CLATKAEFQLDDGNYQDAL 169

Query: 175 RYATKALD---ISPDAPWVTEAVVQQYVLAKEWSRAI---TFLNQKKKNAKEWNRNRAIL 228
           +          + P A  + E  ++     + W   +     L +++   K + +     
Sbjct: 170 KTLQSLYSGGGLQPTAVLLLE--LEAQQRGRNWDAVLELTEVLEKRQSANKTYIKKLKH- 226

Query: 229 LIARSLENADKGDMIASYHDAIESL-------------KLCDNSIMASICAAKSLISQNK 275
                        +      AI+S              K+      A++   +S IS   
Sbjct: 227 ----------DAQIENIRSKAIDSQSLNQYWLHISPMEKMDSKLCAAAV---RSYISLGN 273

Query: 276 KRKAEVILEK----IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
              A  I+E+     W      ++  +Y   L  +   +++ A    +    + + L+ +
Sbjct: 274 CATANRIIEQNVPITWDN----DLIELYAECLDYHVNRQIECAEVWLKSQPNNAQLLLTL 329

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
            K+        +A      ++ + P  +    LAQ+ +   
Sbjct: 330 GKLCTHCELWGKAQNYLEASLSVEPSYKAHFALAQLNEKLG 370


>gi|262189997|ref|ZP_06048302.1| HemY-like protein [Vibrio cholerae CT 5369-93]
 gi|262034120|gb|EEY52555.1| HemY-like protein [Vibrio cholerae CT 5369-93]
          Length = 382

 Score = 76.9 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 53/361 (14%), Positives = 104/361 (28%), Gaps = 18/361 (4%)

Query: 22  SHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           +     V I+  NR    S    ++ I+      + L F V +   +      +    R 
Sbjct: 6   AGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEFLVKKILYTSFHTW-NWFSVRK 64

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  +    G++ +   +   A K  +  +  H      L YL+    A          
Sbjct: 65  QRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMPLLCYLVASAAANGMGDRAK-R 121

Query: 141 EKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           +    +         AV  L     +   GD  +A    T+     P    V   + Q Y
Sbjct: 122 DHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETLTQLQRNHPHNTVVLNLLKQCY 180

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE------- 251
               EW   +  L +  K  +  N     L I                   ++       
Sbjct: 181 QALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGILQDIASQKGSEGLMQHWAQLSR 240

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
            LK     +M  I     LI +    +A  ++++  K    PE+  +   L   +    +
Sbjct: 241 KLKAEPELLMCFIT---QLIHRKADYEAFSMIKESLKKQATPELYALLPELNISDRHPLI 297

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
                    +  + E+   + ++ L       A      A+ +      +  LA   +  
Sbjct: 298 ALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEKALSLRSSVSDYAYLADALEKQ 357

Query: 372 S 372
           +
Sbjct: 358 N 358


>gi|26986933|ref|NP_742358.1| HemY domain protein [Pseudomonas putida KT2440]
 gi|24981543|gb|AAN65822.1|AE016210_10 hemY protein [Pseudomonas putida KT2440]
          Length = 412

 Score = 76.5 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 128/365 (35%), Gaps = 14/365 (3%)

Query: 19  IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78
           I V+ +   V I++G   Y++  +  L+ +   +    LL  +    L+   ++     +
Sbjct: 20  IAVAKHSGYVLISYGGFRYQSGLWAALAGILAVVLLLWLLRYLVGLVLTSSGVVNPWSRR 79

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
               +   A+  G + +A      A++ +H     +       L YL   + A  + +  
Sbjct: 80  NRSRRIRLAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
            +   LE  L+     E A+   + +     G+ + A        +  P    V   + +
Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGENDGALETLLAMQERHPHNGQVLRLLQR 196

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248
            YV   +WS  I  L   +K         A L        L   +    D      S   
Sbjct: 197 LYVERGDWSALIRLLPDLRKGKVLPPAELAALEQRAWGQNLSLATTRGEDALSARQSLER 256

Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           A + L          + A A+ L     + +AE +L    K +    +A +Y  +  ++ 
Sbjct: 257 AWQQLTAAQRQEPQLVLAYAEQLRQVGAQNEAEQVLRTALKRDYESHLARLYGLVRGDDP 316

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
             +L+ A    + + +    L+ + +++L+     +A      ++++    E    LA++
Sbjct: 317 ARQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARL 376

Query: 368 EQANS 372
                
Sbjct: 377 LAGLG 381


>gi|83643191|ref|YP_431626.1| putative protein of heme biosynthesis [Hahella chejuensis KCTC
           2396]
 gi|83631234|gb|ABC27201.1| uncharacterized enzyme of heme biosynthesis [Hahella chejuensis
           KCTC 2396]
          Length = 416

 Score = 76.5 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 72/397 (18%), Positives = 137/397 (34%), Gaps = 38/397 (9%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           L+    +   V   F++       V ++W N L  T+ ++ L++L  F FA   LF    
Sbjct: 6   LVLLISLAIGVALGFLVQLD-AGYVRVSWLNWLLETNVWIALALLIGFYFALHYLFRTLS 64

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
             L+  A       KR Y +  +    GL+  A  N   A+K  S  ++Q    +  L+ 
Sbjct: 65  TTLAVRAGWRQWRKKRKYSRAQQNTIRGLLHYAEGNWKQAQKFLSGSAEQ---SDTPLIN 121

Query: 124 LLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q A        +   L+         + A+          G   +  + A   L+
Sbjct: 122 YLASAQAANELGNEKESDLFLKKAFDNTPGGDVAI----------GVTQAQLQLARGQLE 171

Query: 183 I-----------SPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILL 229
                       +P  P+V + + Q Y    +W +    L   +K K  K+    +  L 
Sbjct: 172 QCLSTLLNLRKKTPHHPFVLKLLQQVYTRLNDWQKMSEILPELRKYKVLKDDEVEKLELE 231

Query: 230 IARSLENADKGDMIASYHDAIESLKLCD--NSIMASI--------CAAKSLISQNKKRKA 279
              +L      + +        S  L    + + A++          A  L+      +A
Sbjct: 232 TWLNLLRHACDEALRGRKGDFNSEPLNAIWDRMPANLRKNPHVIYAYASQLMRLGASGQA 291

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           E +L K  K +    + ++Y  +   N   +L  A    +        L+ + ++ L   
Sbjct: 292 ETLLRKALKQHWSDILIDLYGQIAGANVAEQLLAAEHWLKERPNDAGLLLALGRLCLRNE 351

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
              +A      ++K+  R+E +  LA++  A      
Sbjct: 352 RWSKAKEYFEASLKLKRRRETYYELARLLAAMDQPQA 388


>gi|313496559|gb|ADR57925.1| HemY [Pseudomonas putida BIRD-1]
          Length = 412

 Score = 76.5 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 129/365 (35%), Gaps = 14/365 (3%)

Query: 19  IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78
           I V+ +   V I++G   Y++  +  L+ +   +    LL  +    L+   ++     +
Sbjct: 20  IAVAKHSGYVLISYGGFRYQSGLWAALAGILAVVLLLWLLRYLVGLVLTSSGVVNPWSRR 79

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
               +   A+  G + +A      A++ +H     +       L YL   + A  + +  
Sbjct: 80  NRSRRIRLAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
            +   LE  L+     E A+   + +     G+ + A        +  P    V   + +
Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGENDGALETLLAMQERHPHNGQVLRLLQR 196

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248
            YV   +WS  I  L   +K         A L        L   +    D      S   
Sbjct: 197 LYVERGDWSALIRLLPDLRKGKVLPAAELAALEQRAWGQNLSLATTRGEDALSARQSLER 256

Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           A + L          + A A+ L     + +AE +L    K +    +A +Y  +  ++ 
Sbjct: 257 AWQQLTAAQRQEPQLVLAYAEQLRQVGAQNEAEQVLRTALKRDYESHLARLYGLVRGDDP 316

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
           V +L+ A    + + +    L+ + +++L+     +A      ++++    E    LA++
Sbjct: 317 VRQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARL 376

Query: 368 EQANS 372
                
Sbjct: 377 LAGLG 381


>gi|304387911|ref|ZP_07370084.1| HemY family protein [Neisseria meningitidis ATCC 13091]
 gi|254669888|emb|CBA04384.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Neisseria meningitidis alpha153]
 gi|304338008|gb|EFM04145.1| HemY family protein [Neisseria meningitidis ATCC 13091]
          Length = 405

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|238021064|ref|ZP_04601490.1| hypothetical protein GCWU000324_00961 [Kingella oralis ATCC 51147]
 gi|237868044|gb|EEP69050.1| hypothetical protein GCWU000324_00961 [Kingella oralis ATCC 51147]
          Length = 397

 Score = 76.5 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 123/397 (30%), Gaps = 34/397 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M +LI   F+    I   ++   Y  +V         R +    +      +F W LL  
Sbjct: 1   MKQLIWIIFLFLCAIGLAMLAKTYTGNVYFVVEGYSLRMNLNFFIIAALLSVFVWYLLIK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       P  L      R   K  + L    ++        A +    V       +  
Sbjct: 61  LLVSIFGTPHRLSQFGASRRSRKAVQELNAAGLAYFEGKFQEAAQHADKVLANKQAGDNR 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYAT 178
           ++ L+    A  +     A ++    +     +      L     +    D ++A  + T
Sbjct: 121 MLALMLAAHAADQSHNTEARDQYLNDIAQLPGKAQLSRHLLLAESALNQQDYDTANTHLT 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  I+P    +    ++  +   +   A+  L++ +K       +RA  +     +   
Sbjct: 181 AAAQINPRLTRLARLQLRMALDKGD---ALDILDKTEK------LHRAGAMNETEAQQTA 231

Query: 239 KGDMIASYHDAIESL--KLCDNSIMAS-------ICAAKSLISQNKKRKAEVILEKIWKV 289
           +         A +++  K C   I  +       +  A+         +A       W  
Sbjct: 232 EVAYRKLLDLATDAVGMKACLKRIPETLRNNALNVAIARKYNELGLYDQAI-----AWVN 286

Query: 290 NPHPEIANI------YTHLLSENTVGKLKRALRLEEINKESV-ESLVIV--SKIALEMGS 340
             +P   +          +   +   + K     +   K++  ++ +++   ++A +   
Sbjct: 287 THYPATRDANLLPPFVASVRYLDDRRQQKAIDTGDAWLKDNPKDARLLMYLGELAAQKQL 346

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
             +A      ++ + P  +  L+LA++   +S     
Sbjct: 347 WGKAQGYLEASLSLHPAPQTRLVLAKVYDHSSRPDAA 383


>gi|212710183|ref|ZP_03318311.1| hypothetical protein PROVALCAL_01237 [Providencia alcalifaciens DSM
           30120]
 gi|212687182|gb|EEB46710.1| hypothetical protein PROVALCAL_01237 [Providencia alcalifaciens DSM
           30120]
          Length = 397

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 120/392 (30%), Gaps = 23/392 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+++   F V+   I    +++ +   V I   +    TS   ++       F  + L  
Sbjct: 1   MIKVFVLFIVLIAGIILGPLLAGHQGYVFIRTDSYDITTSVTSLVLCFILLQFVLLFLGW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R F+S  +          Y K +      L+ +A  ++    ++   +S+   F  + 
Sbjct: 61  CYRRFMSTTSRTKGWFTGHKYHKAHTQTQKALLKLAEGDLE---QVEKLMSKHADFSQQP 117

Query: 121 LVY-LLEVQIALAERQY--------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
           ++  L+  + A                A    +  L +  +R              G+++
Sbjct: 118 VINYLMAAEAAQQRGDSYRTHQYLDRAAEAAGKDQLPVNISRV-------RIQLAEGEIH 170

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAI 227
           +A+    K LD +P  P +     Q Y+    +   I  L      +  +  E    +  
Sbjct: 171 AARNGIDKLLDQAPRHPEILRLAEQAYLGTGAYQALIELLPIMAKVQLHSEDELEALKLK 230

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                  +   +G             +   + +      A+ LI     R AE ++ +  
Sbjct: 231 AYKGLMNQCMAEGGSDGLKTWWKNQPRKVRHEVPLQSFLAEHLIECGDARSAEKMIIEGL 290

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           K      +  +   L S+      K  L L + +  +      +  +AL+    ++A   
Sbjct: 291 KQQYDERLLLLIPKLHSDQPEAIEKTLLSLVKQSGATPLLNSTLGILALQHAQWEKAETY 350

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
              A+           LA          +   
Sbjct: 351 FKAALAQRFDAYDAAWLADAYDKLHKPHEAAK 382


>gi|268592918|ref|ZP_06127139.1| protein HemY [Providencia rettgeri DSM 1131]
 gi|291311710|gb|EFE52163.1| protein HemY [Providencia rettgeri DSM 1131]
          Length = 397

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 128/385 (33%), Gaps = 9/385 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++++  F V+   I    +++ +   V I   N    TS   ++       F  + L  
Sbjct: 1   MIKVLILFIVLIAGIILGPLLAGHQGYVFIRTDNYDITTSVTSLVLGFILLQFVLLFLGW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R F+S  +     +  R Y K +      L+ +A  +     ++   +S+   F  + 
Sbjct: 61  CYRRFISTTSRTRGWVSGRKYHKAHTQTQKALLKLAEGDFE---QVEKLMSKHADFSQQP 117

Query: 121 LVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYAT 178
           ++  L+  + A         H+ L+   +   + +  V  S        G++++A+    
Sbjct: 118 VINYLMAAEAAQQRGDEYRTHQYLDRAAEAAGSDQLPVDISRVRIQLAEGEVHAARNGID 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234
           K LD +P  P V     Q Y+ +  +   I  L      +  N  E +  +         
Sbjct: 178 KLLDKAPRHPEVLRLAEQAYLRSGAYQSLIELLPVMAKVQLHNEDELDALKLKAYKGLMN 237

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +   +G             +   +        A+ LI       AE ++    K      
Sbjct: 238 QYMAEGGSDGLKAWWKAQPRRVRHETALQAFLAEHLIECGDTASAEKMIIDGLKQQYDER 297

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +   L SE      K  L L++ N  +      +  ++L+    D+A      A+  
Sbjct: 298 LLLLVPKLNSERPEIIEKTLLHLQKQNGATPLLNSTLGVLSLQHAQWDKAETYFKAALAQ 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379
               +    LA        ++D   
Sbjct: 358 RFDVQDASWLADAFDRQHKSSDAAK 382


>gi|152978037|ref|YP_001343666.1| HemY protein [Actinobacillus succinogenes 130Z]
 gi|150839760|gb|ABR73731.1| HemY protein [Actinobacillus succinogenes 130Z]
          Length = 420

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 15/221 (6%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R++ +  +  L        ++     V I   N  Y  S   ++  L F L     + 
Sbjct: 1   MFRVL-FLMLALLAGLIAGPYLAGKQGYVLIQTENYNYELSIVTLIIFLVFALAVIYGIE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +   F       +    +R   K  K    GLM +   +   A K+    ++       
Sbjct: 60  WLVSRFCRLSNSTYGWFSRRKRMKAQKQTLEGLMRMNEGDYSKAEKLIGKNAKH--SEEP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE------SCRIGDLNSA 173
            L ++   + A        A++ L     I AT      +L  E        +   L +A
Sbjct: 118 ILNFIKAAEAAQQRGDDFSANKYL-----IEATELAGSDNLLVELARTRILLQQQKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           +      L ++P  P V +  V+ Y  +K ++     L Q 
Sbjct: 173 RSSVDSLLILAPKNPEVLKLAVEIYRKSKAYAALDDILQQA 213


>gi|90414238|ref|ZP_01222218.1| hypothetical HemY protein [Photobacterium profundum 3TCK]
 gi|90324685|gb|EAS41226.1| hypothetical HemY protein [Photobacterium profundum 3TCK]
          Length = 395

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/416 (13%), Positives = 126/416 (30%), Gaps = 51/416 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++L+     +   I    +++     V I+  N+    S   ++ ++      + L+  
Sbjct: 1   MIKLLLLVAALIAGIVVGPMLAGNQGYVLISAANQTIEMSLTTLILLVVVLFGVFFLVET 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  LS  +        R   K       GLM +   +   A K+    ++     +  
Sbjct: 61  ILKRLLSAGSSTRGWFSGRKVRKARVQTSNGLMKVIEGDWKQAEKLVVKSAKH---SDTP 117

Query: 121 LVYLLEV------------------QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           L+  L                    Q A  +   ++A       LQ            Y 
Sbjct: 118 LLNYLAAAQAAQGQGNATLRDEYLQQAAELD-DNSLAVALTRAKLQ------------YR 164

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++        A          +   P +   +   Y+  ++W   ++ L Q +K      
Sbjct: 165 QAQ----YEQALATLQDIKQNNNRNPILLALLKDCYIQLEDWQPLLSLLPQLEKTGVLTA 220

Query: 223 RNRAILLIARSLENADK------GDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNK 275
           +    L +                D +  + +A+    K     I    C  K +I +  
Sbjct: 221 QQVTELELQAECGLMAHIGQHSGSDGLMGHWNALSRKAKQRPELI---CCFVKEMIKRKA 277

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             +A  +L    K    P + ++   L   +    + R   L   +  +  +   + ++ 
Sbjct: 278 DSEAYTVLCDSLKKQTDPRLISLVAELNLPDVHPAIVRLQDLLRFDSSNPATHSALGQLF 337

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI---LYWTQSALHA 388
           ++    ++A      A+K+ P    +  L ++    + N             AL A
Sbjct: 338 IQEQKWEEAKTHFEQAIKLGPTVSDYAYLVEVLDKLNDNQGAADVSRQALTLALPA 393


>gi|302036459|ref|YP_003796781.1| hypothetical protein NIDE1096 [Candidatus Nitrospira defluvii]
 gi|300604523|emb|CBK40855.1| conserved protein of unknown function, contains TPR repeats
           [Candidatus Nitrospira defluvii]
          Length = 466

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 103/310 (33%), Gaps = 36/310 (11%)

Query: 1   MLRLIRYFFVISLVICSFIIVSH-YPEDVSI-TWGNRLYRTSPFVILSILYFFLFAWILL 58
           M RL+   F++S+ I  +       P  +++ T  + L+  SP   +S++ F +     L
Sbjct: 1   MFRLLSTIFLVSVGIFLYSYFRELNPGTITVRTSPDALFELSP---VSLVLFSMALGATL 57

Query: 59  FAVSRFFLSCPAMLFHMLHKR--NYDKGYKAL----YTGLMSIAAHNIPLARKMHSYVSQ 112
            A+         +  +    R     +   AL        MS        A  ++ +   
Sbjct: 58  VALIVTIKETSHVFMNWRTNRLVRRKEKVDALHRDGTHAFMS-----KRTADAVNLFERA 112

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
                N     L    I  +E  Y  A    +   +I         ++        DL  
Sbjct: 113 LVIDPNRTDSLLWLGNIYRSESNYTEAIRLHQQAHRIEE------RNVEVLLELAKDLEG 166

Query: 173 AQRYATKAL-------DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           A+RY   AL        I PD            +  ++WS A+   ++  K     +  R
Sbjct: 167 ARRY-EDALQTLQNILRIEPDNLMALIRKRDLQIRLEKWSDALEIQHRLVKANLPESERR 225

Query: 226 AI------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           A        +     +  ++G    +      ++K     + A I   + L+ + K + A
Sbjct: 226 AESNLLLGCMYEVGRQLLERGHPDKARRYFRGAIKKDRTFLPAYIGIGEILVREGKTKNA 285

Query: 280 EVILEKIWKV 289
             IL+KI+  
Sbjct: 286 VEILKKIYAK 295


>gi|330721771|gb|EGG99759.1| HemY [gamma proteobacterium IMCC2047]
          Length = 423

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 130/396 (32%), Gaps = 59/396 (14%)

Query: 1   MLRLIRYFFVISLVIC-SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M RL     ++ +    +   ++     V +++ N    TS ++ L +L   +    +  
Sbjct: 1   MKRLFLLIMLVLVASYYAAAKIAEDAGYVLLSYKNITIETSLWIGLVLLLGLVIIAYMSI 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +    L   AM+        + +      +GL+ +   N   A+K  S  + Q    + 
Sbjct: 61  WLLIRILGSRAMVQRWRRNFRHKRSVSKTTSGLIDLVEGNWKHAQKKLSQAAPQ---SDT 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+  L    A A        E    +     P         +        ++   Q + 
Sbjct: 118 PLINYLSAARAAAANNDPNGSELFLKKAHESTPGAELA--IGITKA-----EIEIQQEHF 170

Query: 178 TKALDI-------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A           P    + + + Q Y+  ++W  A+  L    +  +  +  R     
Sbjct: 171 EQARATLVVLRQSHPKHKHIAQLLQQVYIALEDW-EALQELTPLLRKLRVASDAR----- 224

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNS------------IMASI--------CAAKSL 270
              L++ +K  ++ +   A E     D              + A I           +++
Sbjct: 225 ---LDDLEKQAVLKALERAAEQQPDQDQFDCANHLHRVWLRVPARIRQFEEVTGLYVQNM 281

Query: 271 ISQNKKRKAEVILEKI----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
                  +AEV L +     W       +A  Y  L +EN   ++K A R  + + +S E
Sbjct: 282 QRLGDLVRAEVALRETLDNRWSDK----LAVDYGLLSAENPQAQIKSAERWLKKHSDSAE 337

Query: 327 SLVIVSKIALEMGSIDQAHAKAM--LAMKIAPRKEI 360
             + + +++L      +A    M  LA++  P    
Sbjct: 338 LKLTLGRLSLRNQLWGKAREFFMGSLALRETPEAHA 373


>gi|289677625|ref|ZP_06498515.1| HemY, N-terminal:HemY, N-terminal:HemY, N-terminal [Pseudomonas
           syringae pv. syringae FF5]
 gi|330976466|gb|EGH76518.1| HemY [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 414

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 125/359 (34%), Gaps = 18/359 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  +     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVVALLVIALLRLLISLLTTSGRVVNPWSRRNRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++  T  +  L Y+   + A  + +Y      
Sbjct: 84  RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD + A        +  P  P V   + + + 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTDGALTTLLAMKERHPHNPQVLRQLQRLHQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A L          L A S         + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPPKELAELERRAWGENLSLAAYSEGIEGAPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGTDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            +L+ A    + +      L+ + +I L+     +A      ++++    E    LA++
Sbjct: 320 KQLQAAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRMERNPETCAELARL 378


>gi|304414151|ref|ZP_07395519.1| putative protoheme IX synthesis protein [Candidatus Regiella
           insecticola LSR1]
 gi|304283365|gb|EFL91761.1| putative protoheme IX synthesis protein [Candidatus Regiella
           insecticola LSR1]
          Length = 397

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 119/367 (32%), Gaps = 9/367 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL     A +++  + R               + 
Sbjct: 21  LAGHQGYVLIQTDNYNIETSVTAMIIILVLVFVALLIIEWILRRIFRTGYYTRGWFIGQK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            ++  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RNRASKQTKAALIKLAEGDFKQVEKLLTCNADHA--EQPMVNYLLAAEAAQQRGDERRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + L  +   P V     Q ++
Sbjct: 139 QYLERAAEVADTNQLPVDITRVRIQLAQGQIHAARHGVDRLLGHASQHPEVLRLAEQAFL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                +  +  L   KK           L +   +   ++              +     
Sbjct: 199 STGAHNALLDILPTMKKMRLHSEAEIKTLELQAYIGIMNQCMAEEGSEGLKRWWQSQPGK 258

Query: 260 I--MASICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
           I   +++ AA  + LI  +  + A+ I+    K      + ++   L SE+     K   
Sbjct: 259 IRRESALQAALVEHLIECDDHQIAQQIILTGLKRQYDERLISLMPLLKSEDAKALEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS--H 373
              +    +      + ++ L+ G  +QA      A++  P    + LLA          
Sbjct: 319 LQIKQQGATPLLNSTLGQLLLKQGEWEQASEAFRAALQQRPDGHDYALLADTLDKLHRPK 378

Query: 374 NTDKILY 380
           +  ++ +
Sbjct: 379 DAAEVRH 385


>gi|330970390|gb|EGH70456.1| HemY [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 414

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 123/359 (34%), Gaps = 18/359 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  +     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVVALLVIALLRLLITLLTTSGRVVNPWSRRNRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++  T  +  L Y+   + A  + +Y      
Sbjct: 84  RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD   A        +  P  P V   + + Y 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A L          L A           + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGNDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            +L+ A    + +      L+ + +I L+     +A      ++++    E    LA++
Sbjct: 320 KQLQTAEGWLKQHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378


>gi|183600274|ref|ZP_02961767.1| hypothetical protein PROSTU_03834 [Providencia stuartii ATCC 25827]
 gi|188020065|gb|EDU58105.1| hypothetical protein PROSTU_03834 [Providencia stuartii ATCC 25827]
          Length = 397

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 123/385 (31%), Gaps = 9/385 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+++   F V+   I    +++ +   V I   N    TS   ++       F  + L  
Sbjct: 1   MIKVFILFIVLIAGIILGPLLAGHQGYVFIRTDNYDITTSVTSLVLSFILLQFVLLFLGW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R F+S  +     +  R Y K +      L+ +A  +     ++   +S+   F  + 
Sbjct: 61  CYRRFISTTSRTKGWVSGRKYHKAHSQTQKALLKLAEGDF---DQVEKLMSKHADFSQQP 117

Query: 121 LVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYAT 178
           ++  LL  + A         H+ L    ++  + +  V  S         ++ +A+    
Sbjct: 118 VINYLLAAEAAQQRGDEYRTHQYLNRAAEVAGSDQLPVDISRVRIQLAEDEVYAARTGID 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           K LD +P  P +     Q Y+ +  +   I  L    K           L +       +
Sbjct: 178 KLLDQAPRHPEILRLAEQAYLRSGAYQALIELLPVMAKVQLHSEDELEALKLKAYKGLMN 237

Query: 239 KGDMIASYHDAIESLKLCDNSI--MASI--CAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +           E  K     I    ++    A+ LI  N    AE I+    K      
Sbjct: 238 QCMAENGSEGLKEWWKAQPRKIRHEIALQSFLAEHLIECNDMESAEKIIIDGLKQQYDER 297

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +   L S+      K   +L + +  +      + +IAL+    + A +    A+  
Sbjct: 298 LLLLAPRLRSDKPEQLEKVLKQLVKQSGATPLLNSTMGQIALQHAQWEHAESYFKAALAQ 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379
                    LA          +   
Sbjct: 358 RFDAHDAAWLADALDKLHKAEEAAK 382


>gi|218767899|ref|YP_002342411.1| hypothetical protein NMA0990 [Neisseria meningitidis Z2491]
 gi|121051907|emb|CAM08213.1| hypothetical protein NMA0990 [Neisseria meningitidis Z2491]
 gi|319410146|emb|CBY90482.1| putative heme biosynthesis protein HemY [Neisseria meningitidis WUE
           2594]
          Length = 405

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 124/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|52424328|ref|YP_087465.1| HemY protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306380|gb|AAU36880.1| HemY protein [Mannheimia succiniciproducens MBEL55E]
          Length = 437

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 73/220 (33%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M +++ +  +  L        +S     V I  GN     S   ++ +    +    +L 
Sbjct: 1   MFKVL-FLMLALLAGLVAGPYLSGKQGYVLIATGNYNIEMSITTLIILFIAAMAVVYILE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
                F       +    KR  +K  +    GLM +   +   A K+    ++       
Sbjct: 60  WAISHFFKWSNATYTFFSKRKRNKAQRQTLEGLMRMTEGDYSKAEKLIGKNAKHSA--EP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE------SCRIGDLNSA 173
            L ++   + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 ILNFIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVELARTKILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++P  P V +   + Y+     S+A + L+ 
Sbjct: 173 RSSVDSVLEMAPRNPEVLKLATEIYLR----SKAYSTLDN 208


>gi|325127890|gb|EGC50794.1| hypothetical protein NMXN1568_1359 [Neisseria meningitidis N1568]
          Length = 405

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|254804658|ref|YP_003082879.1| HemY protein [Neisseria meningitidis alpha14]
 gi|254668200|emb|CBA04941.1| HemY protein [Neisseria meningitidis alpha14]
 gi|325203866|gb|ADY99319.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
          Length = 405

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  +  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|325202424|gb|ADY97878.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
 gi|325207824|gb|ADZ03276.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 405

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|186476928|ref|YP_001858398.1| HemY domain-containing protein [Burkholderia phymatum STM815]
 gi|184193387|gb|ACC71352.1| HemY domain protein [Burkholderia phymatum STM815]
          Length = 396

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/389 (13%), Positives = 121/389 (31%), Gaps = 21/389 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR + +   +  +     IV       V + +       S  + +  +         L  
Sbjct: 3   LRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     ++   K + AL       A  N+   R   +  + + +  N  
Sbjct: 63  IVRNIWRMPQRVAAYRARQRVAKAHAALRD-----AIGNLYAGRFSRAEKAARDSLANPD 117

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
                 +  A A  + +    + E + QI A        +     R    D + A    T
Sbjct: 118 NKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATADMRADGRDADGALLALT 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234
           +            +  ++     K W   +  +     ++  +     R R +       
Sbjct: 178 EMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLR 237

Query: 235 ENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +     D +    H    + +        +  AA+ L++ N+ ++A  I+E+    N   
Sbjct: 238 DRRHNADALLELWHSLTPTERHSPRL---ADLAAELLVALNRPQEARKIVEEALAQNWDA 294

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +   Y      + +  +++A    +   E  + L  + ++ L      +A +    A+K
Sbjct: 295 RLLRRYPDTTGGDALPLIQKAEAWRKERPEDADLLFALGRLCLHQQLWGKAQSFLEQALK 354

Query: 354 IAPRK----EIFLLLAQIEQANSHNTDKI 378
           +A  +         LA++ +    +  K 
Sbjct: 355 LADNETLKIRSHRALARLHE-QLGDVSKA 382


>gi|302187600|ref|ZP_07264273.1| HemY, N-terminal [Pseudomonas syringae pv. syringae 642]
          Length = 414

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 124/359 (34%), Gaps = 18/359 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  +     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVVVLLVIALLRLLITLLTTSGRVVNPWSRRNRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++  T  +  L Y+   + A  + +Y      
Sbjct: 84  RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD + A        +  P  P V   + + Y 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTDGALTTLLAMKERHPHNPQVLRQLQRLYQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A L          L A           + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPPKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            +L+ A    + +      L+ + +I L+     +A      ++++    E    LA++
Sbjct: 320 KQLQTAEGWLKQHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378


>gi|66043330|ref|YP_233171.1| HemY, N-terminal [Pseudomonas syringae pv. syringae B728a]
 gi|63254037|gb|AAY35133.1| HemY, N-terminal:HemY, N-terminal:HemY, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
          Length = 414

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 123/359 (34%), Gaps = 18/359 (5%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
            +   V I + N  Y +S +  L++L   L    LL  +     +   ++     +    
Sbjct: 24  EHSGYVLIAYQNFRYESSLWATLALLVVALLVIALLRLLITLLTTSGRVVNPWSRRNRRR 83

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +   A+  G M +A      A++     ++  T  +  L Y+   + A  + +Y      
Sbjct: 84  RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141

Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           LE  L+     E A+      +      GD   A        +  P  P V   + + Y 
Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249
              +WS  +  + + +K+     +  A L          L A           + S   A
Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESA 259

Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + L          + A A  L     + +AE +L    K   +  +A +Y  +   + +
Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            +L+ A    + +      L+ + +I L+     +A      ++++    E    LA++
Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378


>gi|308388966|gb|ADO31286.1| hypothetical protein NMBB_0881 [Neisseria meningitidis alpha710]
 gi|325129907|gb|EGC52708.1| hypothetical protein NMBOX9930304_1289 [Neisseria meningitidis
           OX99.30304]
 gi|325135997|gb|EGC58607.1| hypothetical protein NMBM0579_1331 [Neisseria meningitidis M0579]
          Length = 405

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  +  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|307826234|ref|ZP_07656443.1| HemY domain protein [Methylobacter tundripaludum SV96]
 gi|307732696|gb|EFO03564.1| HemY domain protein [Methylobacter tundripaludum SV96]
          Length = 410

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/374 (15%), Positives = 118/374 (31%), Gaps = 22/374 (5%)

Query: 20  IVS--HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLH 77
            +     P  V I  G     TS  V    L    F + + F    + L  P  + +   
Sbjct: 25  WLGGFENPGYVLIGIGYWSLETSLIVFAVSLIMGFFVFYIFFRFLGWLLRLPGQIKNRGK 84

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQY 136
              +++  +AL  GL+  A  N   A K+   + +  +     L++ L   + A +   Y
Sbjct: 85  SIKFNRSQEALIAGLVDSAEGNWEKAEKV---LIKHASHSGAPLIHYLTAARAAQSRGAY 141

Query: 137 NIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +   E L+         + A+  L              A +  T+   I P    V + +
Sbjct: 142 DKRDEYLKKAADQAPGSDVAI-GLTQAELHLSEKQFEQALQTLTRLQSIDPTHASVLKLL 200

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            Q Y  A +W      +     N         +L      +   +     S  +      
Sbjct: 201 HQAYQQAGDWEGIRKLIPSLNNNKVLMEAEIKLLETEAFSKLLKQAAERGSADEIDSLWS 260

Query: 255 LCDNS------IMASICAAKSLISQNKKRKA--EVILEKIWKVNPHPEIANIYTHLLSEN 306
              +       + A   AA        K +      L   W       +  ++ ++ S +
Sbjct: 261 EIPDYIRNMKGVSAIYFAAMIDAGAGAKVEGGLSRALSTTWDQT----LVVLFGNVQSID 316

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              +L+ A +   ++      L ++ K++++ G   +A      ++ I P    + L   
Sbjct: 317 VARQLETAEQWLPMHPRDAVFLTVLGKLSMKCGDNQKATTYLTKSLSIEPTVPAYQLFGD 376

Query: 367 IEQANSHNTDKILY 380
           +  A   + D+   
Sbjct: 377 LLSAQ-GDKDRASE 389


>gi|152985285|ref|YP_001351319.1| HemY protein [Pseudomonas aeruginosa PA7]
 gi|150960443|gb|ABR82468.1| HemY protein [Pseudomonas aeruginosa PA7]
          Length = 412

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 136/394 (34%), Gaps = 24/394 (6%)

Query: 1   MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R+ +    V+ +     + +S     V I + +  Y +S +  L++L       +L+ 
Sbjct: 1   MRRVYLLILAVVLVATLVGLAISEQAGYVLIAYKSFRYESSLWSFLALLAVVWLLVVLVR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V R   S   ++          +   A ++GL  +   N P A +     ++       
Sbjct: 61  LVLRLLGSSGRVVNPWSRYNRRRRVQMAEHSGLRDLGEGNWPQALRHLRRAAE---MGER 117

Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRY 176
            L++ L   + A    +Y+ A + L    +     +  +  L         GD   A+  
Sbjct: 118 PLMHYLGAARAANELERYDEADDLLNRAREREPDAQL-LVGLTRAQLLINRGDYPQARNT 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL------NQKKKNAKEWN-RNRAILL 229
             +   + P    V   + Q YV   +W +A+  L       +  K+++  +   RA + 
Sbjct: 177 LEELHGLQPQHRTVLRLLQQLYVTQHDW-QALCVLLPELRKERVLKDSELRDLERRAWVA 235

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSI---MASIC-AAKSLISQNKKRKAEVILEK 285
             +        +   +     +  +   +++    A +   A  L+    + +AE +L  
Sbjct: 236 SLQEAGERGLNEGETALQPLTQRWQNVPSALRGDPAVVAGYAAQLLRLGAEEEAEEVLRH 295

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K      +  +Y  +   +   +L+ A    + + +    L+ + ++ L      +A 
Sbjct: 296 ALKQGFDATLVQLYGQVRGRDPAKQLQAAEGWLKEHPDDPGLLLTLGRLCLVNKLWGKAR 355

Query: 346 AKAMLAMKIAPRKEIF----LLLAQIEQANSHNT 375
                ++      E       LLAQ+ +    N 
Sbjct: 356 EYLEASLSFQRSAETCAELGRLLAQLGEVERSNQ 389


>gi|325206379|gb|ADZ01832.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
          Length = 407

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/398 (13%), Positives = 125/398 (31%), Gaps = 14/398 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  +  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387
           + + P     L+LA++  E       +        A+ 
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQRNLVLEAVS 395


>gi|148545468|ref|YP_001265570.1| HemY domain-containing protein [Pseudomonas putida F1]
 gi|148509526|gb|ABQ76386.1| HemY domain protein [Pseudomonas putida F1]
          Length = 412

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 16/366 (4%)

Query: 19  IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78
           I V+ +   V +++G   Y++  +  L+ +   +    LL  +    L+   ++     +
Sbjct: 20  IAVAKHSGYVLVSYGGFRYQSGLWAALAGILAVVLLLWLLRYLVGLVLTSSGVVNPWSRR 79

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
               +   A+  G + +A      A++ +H     +       L YL   + A  + +  
Sbjct: 80  NRSRRIRLAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
            +   LE  L+     E A+   + +     G+ + A        +  P    V   + +
Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGENDGALETLLAMQERHPHNGQVLRLLQR 196

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN---------ADKGDMIASYH 247
            YV   +WS A+  L    +  K         L  R+             D      S  
Sbjct: 197 LYVERGDWS-ALIRLMPDLRKGKVLPAAELAALEQRAWGQNLSLATTRGEDALSARQSLE 255

Query: 248 DAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
            A + L          + A A+ L     + +AE +L    K +    +A +Y  +  ++
Sbjct: 256 RAWQQLTAAQRQEPQLVLAYAEQLRQVGAQNEAEQVLRTALKRDYESHLARLYGLVRGDD 315

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              +L+ A    + + +    L+ + +++L+     +A      ++++    E    LA+
Sbjct: 316 PARQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELAR 375

Query: 367 IEQANS 372
           +     
Sbjct: 376 LLAGLG 381


>gi|317046387|ref|YP_004114035.1| HemY protein [Pantoea sp. At-9b]
 gi|316948004|gb|ADU67479.1| HemY protein [Pantoea sp. At-9b]
          Length = 398

 Score = 75.0 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 118/382 (30%), Gaps = 24/382 (6%)

Query: 11  ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70
           I+ V+   + ++ +   V I   N    TS   +  IL   L   + +  V R      A
Sbjct: 12  IAGVVLGPM-LAGHQGYVLIQTDNWNIETSVTGLAIILILSLLVILFVEWVLRRLFRTGA 70

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
                   R   +  +   T LM +A  +     K+ S     H        YLL  + A
Sbjct: 71  RTRGWFTGRKRRRAQRHTQTALMKLAEGDYKQVEKLLSK-DADHA-DQPVANYLLAAEAA 128

Query: 131 LAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
                   A++ LE   +        +  TR               + ++A+    + L+
Sbjct: 129 QQRGDELRANQHLERAAELSQNDTIPVEITRV-------RLQLARNEDHAARHGIDRLLE 181

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-----LIARSLENA 237
           ++P  P V     Q Y+    W   +  L   +K     +  RA L     L   +   A
Sbjct: 182 VAPRHPEVLRLAEQAYIRTGAWGALLDILPSMQKVQINDDTQRAALQQQAWLGLMNQAMA 241

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           D+G          +S K    + +      + LI  +    A+ I+    K      +  
Sbjct: 242 DQGSDGLKRWWHNQSRKTRQETALQVAMV-EHLIECDDPDTAQAIVLDGLKRQYDDRLVL 300

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   + S +     K      + +  +      + ++ +  G   QA      A+   P 
Sbjct: 301 LMPRIKSGDPAALEKALRNQIKQHGATPLLHSTLGQMLMRHGEWQQAAEAFQQALAQRPD 360

Query: 358 KEIFLLLAQIEQANSHNTDKIL 379
              +  LA +        +   
Sbjct: 361 AFDYAWLADVYDRMHRPEEAAK 382


>gi|269103736|ref|ZP_06156433.1| HemY-like protein [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163634|gb|EEZ42130.1| HemY-like protein [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 395

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/387 (12%), Positives = 119/387 (30%), Gaps = 12/387 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++L+     +   I     ++     V I++  +    S   ++ ++   L  + ++  
Sbjct: 1   MIKLLLLIAALIAGIVVGPDLAGSQGYVLISFAEQTIEMSLTTLVILIVALLALFFVVEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R   S  +       +R   K       GL+ +   +   A K+ +  ++        
Sbjct: 61  ILRGLFSMGSSTRGWFSQRKARKARTLTADGLVKVIEGDWKQAEKLVTKAAKN--SDAPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYAT 178
           L YL   + +      +   E L+   +           L       R      A     
Sbjct: 119 LNYLAAAEASQELGNTDQRDEYLKRAAECDGQNLA--VGLVRAKLQIRQQQYEQALATLQ 176

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +    +     V   + + Y+  ++W   +  L Q +K+       +  L +        
Sbjct: 177 EIKRDNGRNLIVLNLLKECYIQLEDWKALLEILPQLEKDGVITTETKNQLELDAQRGLMV 236

Query: 239 KGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +    +     +      + KL   S++ +    + +I+ N    A  +L +  K     
Sbjct: 237 QIAKQSGSDGLMSHWNGLNRKLKQQSVLVAAFV-EQMINCNADNDAYTVLREYLKKTSDD 295

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            + N+   L   +    + R   L   +  +  +   + ++    G   +A      A+ 
Sbjct: 296 TLINLVPKLKLSDNHPAIVRLQDLLRHDSRNAATHSALGQMFAANGKWQEAKEHFTQAVA 355

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILY 380
           + P    +  L Q  +    +      
Sbjct: 356 LRPDVSDYAHLVQTLENLDDSQGAAQA 382


>gi|24375798|ref|NP_719841.1| hemY protein, putative [Shewanella oneidensis MR-1]
 gi|24350746|gb|AAN57285.1|AE015863_14 hemY protein, putative [Shewanella oneidensis MR-1]
          Length = 388

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 140/405 (34%), Gaps = 36/405 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++++ +F +I L +C    +      V I  G+    TS    + +L  F   + +L  
Sbjct: 1   MIKVLIFFGIILLGLCISPWIVGNTGYVYIAAGDYQLETSLAFGIIMLIVFYALFQVLEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVS--QQHTFH 117
           +    ++       + H+       K    G ++IA  + P A R M       +    +
Sbjct: 61  LVITVINLLLRSRFIPHQWRRRSAKKHTLMGALAIAEEDWPAAERAMIKGADNGELPALN 120

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSA 173
                   + Q   AER   +A  + + +         TR       +  +    D    
Sbjct: 121 LLAAARAAQHQNKTAERDQYLARAETQPLAANAVATTRTRYLLKQGEFTLARAELD---- 176

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKEWNRN 224
            + A  +   +P         ++ Y   ++W               L+  + N+     +
Sbjct: 177 -KLAPTSKSKAPVLKLA----LELYRAQQDWEALKLLLPILKKRQILDDIQLNSLSVETH 231

Query: 225 RAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            A+L  A     +  ++     S  +  +S  L              L   N+K +A  +
Sbjct: 232 SALLQTASLKGEDALEQCWQWLSRDERNQSEFLA--------IYTMGLCRFNRKEQAIKL 283

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           L K  + +P   +  +   +++ +     K+ L+ E  ++ + +    ++ +  +   + 
Sbjct: 284 LSKKLRSSPESALLEVIPQIVTAHDTDIRKQLLKHEITHENNADYQRCLALLYQQTRDMK 343

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           +A        +IAP K+ +L LA+I++             + A+ 
Sbjct: 344 EAKTCWQNVCRIAPTKDSWLSLARIQE-QLGEQGHANQSYRQAVT 387


>gi|238756299|ref|ZP_04617614.1| hypothetical protein yruck0001_690 [Yersinia ruckeri ATCC 29473]
 gi|238705505|gb|EEP97907.1| hypothetical protein yruck0001_690 [Yersinia ruckeri ATCC 29473]
          Length = 397

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 126/384 (32%), Gaps = 7/384 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++  F ++   I    +++ +   V I   +    TS   +  +L   LF    + +
Sbjct: 1   MIRVLLLFLLLIAGIILGPMLAGHQGYVLIQTDDYNIETSITKLSIMLIALLFVLFAIES 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R      A        R   +  K     L+ +A  +     ++ +  +         
Sbjct: 61  VLRRMFRTGARTRGWFIGRKRSRARKQTKAALIKLAEGDFKQVEQLLTRNADHA--EQPM 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179
           + YLL  + A         ++ LE   ++  T +  V  +        G +++A+    +
Sbjct: 119 VNYLLAAEAAQQRGDEFRTNQYLERAAEVADTDQLPVDITRVRIQLAQGQIHAARHGVDR 178

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLE 235
            L+ +P  P V     Q Y+    +S  +  L   +K         + L     I    +
Sbjct: 179 LLEQAPRHPEVLRLAEQAYLGTGAFSSLLDILPAMQKVQLHTESEISALQQRAYIGIMNQ 238

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              +           +  +   +++   +  A  LI  +  + A+ ++    K      +
Sbjct: 239 CMAEEGSDGLKRWWHDQNRKVRHNVALQVALADHLIECDDHQVAQQVILDGLKRQYDERL 298

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +   L S N     K   +  + +  +      + ++ L+ G  +QA      A++  
Sbjct: 299 ILLIPRLKSGNPEPLEKALRQQIKQHGATPLLNSTLGQLMLKHGEWEQASEAFRAALQQR 358

Query: 356 PRKEIFLLLAQIEQANSHNTDKIL 379
           P    +  LA          D   
Sbjct: 359 PDGYDYAWLADAYDKLHRPEDAAQ 382


>gi|261392853|emb|CAX50434.1| putative heme biosynthesis protein HemY [Neisseria meningitidis
           8013]
          Length = 405

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRTPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|121634574|ref|YP_974819.1| hypothetical protein NMC0732 [Neisseria meningitidis FAM18]
 gi|161869723|ref|YP_001598890.1| hypothetical protein NMCC_0743 [Neisseria meningitidis 053442]
 gi|120866280|emb|CAM10021.1| hypothetical protein NMC0732 [Neisseria meningitidis FAM18]
 gi|161595276|gb|ABX72936.1| HemY protein [Neisseria meningitidis 053442]
 gi|325142015|gb|EGC64447.1| hypothetical protein NMB9615945_1382 [Neisseria meningitidis
           961-5945]
 gi|325197999|gb|ADY93455.1| conserved hypothetical protein [Neisseria meningitidis G2136]
          Length = 405

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|53802804|ref|YP_115449.1| hemY protein [Methylococcus capsulatus str. Bath]
 gi|53756565|gb|AAU90856.1| putative hemY protein [Methylococcus capsulatus str. Bath]
          Length = 424

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/363 (15%), Positives = 109/363 (30%), Gaps = 23/363 (6%)

Query: 25  PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84
           P  V I +G     +S  V+   L      +     +    +  P +L      R   + 
Sbjct: 31  PGYVIIGYGPWTLESSLVVLAGALTLAFILFYASIRLVIHAMRLPKILRQRGGHRRNRQS 90

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
            +AL TGL+  A  N   A K     +         L+  L    A   R      ++  
Sbjct: 91  QEALITGLIESAEGNWEKAEKTLIRHAADSGV---PLINYLTAARAAHSRGAAEQRDEYL 147

Query: 145 MML--QIPATREFAVYSLYFESCRIGDL--NSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            +    +P         L     ++ D   + A    ++   I+P    V   + Q Y  
Sbjct: 148 KLAHEAVPEAEIA--IGLTRAELQLSDKQFDQALESLSQLNRIAPTHATVLRLLHQVYAQ 205

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDA----IESLK 254
            ++W      +     N         +L      +L         A+   A    I +  
Sbjct: 206 MEDWEGLRNLIPSLHTNKVMMEAEIKLLETETYSALLKQHAETRDAARLKALWENIPAHI 265

Query: 255 LCDNSIMASICAAKSLISQN-KKRKAEVI-LEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
                I     AA        +   A    L++ W       +  +Y  +   +   +L 
Sbjct: 266 RKATGIETLYFAAMIDAGAGPEIEPAVRASLDREWSQT----VVVLYGCIQLPDPGEQLA 321

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQA 370
           RA +    +      L ++ K+A+     + A      ++ + P  E   L+    +E+ 
Sbjct: 322 RAEQWLVRHSNDAVLLRVLGKLAVLARQTESALRYLDRSLALEPSVEACQLMGDLLLERN 381

Query: 371 NSH 373
            + 
Sbjct: 382 ETA 384


>gi|168048872|ref|XP_001776889.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671745|gb|EDQ58292.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 946

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 102/305 (33%), Gaps = 51/305 (16%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E + +   E L+ ML+      P      +     E    GD+ SA+    +A  
Sbjct: 582 RAAQLE-KSHGTRESLDAMLKKAVGYCPQAEVLWLMG-AKEKWLAGDVPSARAILQEAYA 639

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK--- 239
             P++  +  A  +      E  RA   L + ++            ++ R + N DK   
Sbjct: 640 AIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVEREIGNVDKERE 699

Query: 240 --------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                     G   A+      +L+ C +SI   + AA      
Sbjct: 700 LLEEGLERFPQFHKLWLMLGQLKDRLGQPEAARETYERALRNCPHSIPLWLSAAALEEKL 759

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
               KA  +L K    N H PE+      +  E   G  K A  L     ++   S  + 
Sbjct: 760 GGLSKARAVLTKARLKNTHNPELWLA--AIRVEAHAGNKKDAESLMAKALQDCPSSGRLW 817

Query: 332 SKIALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNT--DKILYWTQSAL 386
           ++ A++M    Q  +K++ A+K     P       +A + +    +   DK   W   A+
Sbjct: 818 AE-AIDMAPRPQRKSKSVDALKRCDQDPYV-----IAAVAKLFWQDRKVDKARSWLNRAV 871

Query: 387 HAMPD 391
              PD
Sbjct: 872 TLAPD 876


>gi|242237683|ref|YP_002985864.1| protoheme IX biogenesis protein [Dickeya dadantii Ech703]
 gi|242129740|gb|ACS84042.1| HemY protein [Dickeya dadantii Ech703]
          Length = 397

 Score = 74.2 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/373 (14%), Positives = 126/373 (33%), Gaps = 27/373 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML++   F ++   I    +++ +   V I   N    TS   ++ +L   L A+I L  
Sbjct: 1   MLKVFLLFAMLIAGIVVGPMLAGHQGYVLIQTDNYNIETSVTGLVIMLVLLLLAFIALEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R      A        R   +  +     L+ +   +     K+ +  +         
Sbjct: 61  LLRRLFRTGARTRGWFIGRKRSRARQQTRAALLKLTEGDYHQVEKLLTRNADHA--DQPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172
           + YLL  + A          + LE   +        +  TR               + ++
Sbjct: 119 VNYLLAAEAAQQRGDDFRTRQYLERAAEIADNDQLPVDITRV-------RIQLARNEDHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNR 225
           A+    + L+++P  P V     Q ++    +S  +  L   +K       + +   +  
Sbjct: 172 ARHGVDRLLEVAPRHPEVLRLAEQAFLRTSAYSALLDILPAMRKTRIHDEAHLQSLQQRA 231

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            I L+ +++  A+ G          ++ K+  +  M     A+ LI+ +    ++ I+  
Sbjct: 232 TIGLMDQAM--AEGGSEGLKQWWKNQNRKVRQDLSMQVAM-AEHLIACDDHTTSQNIIID 288

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K      +  +   L + N     K   +  +   +       + ++ ++ G   QA 
Sbjct: 289 GLKRQYDHRLVQLMPRLQTGNPEPLEKTLRQQLKQRADDALLHSTLGQLLMKHGEWKQAS 348

Query: 346 AKAMLAMKIAPRK 358
              + A+ + P  
Sbjct: 349 EAFLAALALRPDA 361


>gi|113460196|ref|YP_718253.1| porphyrin biosynthesis protein [Haemophilus somnus 129PT]
 gi|112822239|gb|ABI24328.1| porphyrin biosynthesis protein [Haemophilus somnus 129PT]
          Length = 425

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 102/331 (30%), Gaps = 53/331 (16%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    V+   +     +S     V I   +     S  +++      +    L+  
Sbjct: 1   MFRVLFLMLVLLAGLIGGPYLSGKQGYVLIQTASYNIEMSITMLVIFFVILMAIVYLIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V   F       +    +R   K  +    GL+ +   +   A K+    ++        
Sbjct: 61  VVTRFFRLSNNTYSWFSRRKRVKAQRQTLEGLVKMNEGDYSKAEKLIGKNARH--SDKPI 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQ 174
           L  +   + A       +A+  L     I AT      SL  E        +   L +A+
Sbjct: 119 LNLIKAAEAAQQRGDDFVANRYL-----IEATELAGTDSLIVEIARTRILLQQNKLPAAR 173

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEW-----------------SRAITFLNQKKKN 217
                 L+++     V +  V+ Y+ +  +                 S   T L +K ++
Sbjct: 174 SSVDSLLEMTSRNKEVLKLAVKIYLKSAAFHALDKILDQIEKVGLYSSDEFTALQRKVED 233

Query: 218 A---------------------KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                                     RN   + +       D  D  ++Y  AI++LK  
Sbjct: 234 GLLDEKMNEEGVDGLLRWWDEQPRKRRNDLYVKVGLIRRLLDSDDHESAYELAIDALKKV 293

Query: 257 DNSIMASICAAKSLISQ--NKKRKAEVILEK 285
           +NS+ A++     +         K   +LEK
Sbjct: 294 ENSVEANVALCTQITRLQPEDNSKLLKLLEK 324


>gi|325133707|gb|EGC56363.1| hypothetical protein NMBM13399_1423 [Neisseria meningitidis M13399]
 gi|325144183|gb|EGC66490.1| hypothetical protein NMBM01240013_1435 [Neisseria meningitidis
           M01-240013]
          Length = 407

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 124/398 (31%), Gaps = 14/398 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                 + P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387
           + + P     L+LA++  E       +        A+ 
Sbjct: 358 IALKPSISARLVLAKVFDEIGEPQKAEAQRNLVLEAVS 395


>gi|254672849|emb|CBA07059.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
           [Neisseria meningitidis alpha275]
          Length = 405

 Score = 73.8 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 123/390 (31%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E       +   
Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387


>gi|123440579|ref|YP_001004573.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332159809|ref|YP_004296386.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|122087540|emb|CAL10321.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|325664039|gb|ADZ40683.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330862555|emb|CBX72709.1| protein hemY [Yersinia enterocolitica W22703]
          Length = 399

 Score = 73.8 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 117/365 (32%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L   L A++++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKL 255
            +  +S  +  L    K         A L     I    +   +           +  + 
Sbjct: 199 RSGAYSSLLEILPAMSKVQVHTAEEIAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L S N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDSDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPIEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QHIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|329898167|ref|ZP_08272364.1| HemY protein [gamma proteobacterium IMCC3088]
 gi|328920876|gb|EGG28313.1| HemY protein [gamma proteobacterium IMCC3088]
          Length = 386

 Score = 73.8 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 124/370 (33%), Gaps = 18/370 (4%)

Query: 25  PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84
           P  V +T+      ++ +V   +L   +FA  ++F + R  +S P  +      R   + 
Sbjct: 26  PGYVLLTFQGWRIESTVWVFAIVLAGGIFASSVVFRLLRSIVSAPGSIGRWHLGRKQRRT 85

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
            ++L   L      +           S+      +  + L  +Q  +       A  +L+
Sbjct: 86  QESLEQALEKAVLGDSKAVTDALRSASKCR---QDEWLKLATIQADIDHGDLKRAEAQLD 142

Query: 145 MM-LQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDISPDAPWVTEAVVQQYVL 200
            + L     +  +V+     S   G+   A  Y     +AL  +     V  AV      
Sbjct: 143 ALTLSDSDLQSASVWLRAQLSYLQGEYTVANDYLAKLPEALKATVAVQRVKLAVKTLLAD 202

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +     +  L       KE      I L  R  E     DM+A+Y    +S +  D+ +
Sbjct: 203 HRAVMGLLATLPAGVMPNKERLARLTIALKHRLAECRAAQDMLAAYQSLTKSDQAQDDIL 262

Query: 261 MASICAAKSLISQNKKRKAEVI----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           +A   A   L+ +   ++A  +     +K W      E A+  +  L  +     K+   
Sbjct: 263 LAVFSA---LLREGHGQQAIELAGAHYKKAWPKTVLAEFAHAPSAALPSSPS---KKLAV 316

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
                  S   L++  ++A +      A      + +          LA++  A   + +
Sbjct: 317 WLGDEANSAAGLLLQGRLAAKQAIWGVAKTHLEKSYQAQQSAFTAQCLAKVCLA-IDDRE 375

Query: 377 KILYWTQSAL 386
             + W + A 
Sbjct: 376 ASILWFERAA 385


>gi|168004776|ref|XP_001755087.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693680|gb|EDQ80031.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 938

 Score = 73.8 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 102/305 (33%), Gaps = 51/305 (16%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E + +   E L+ ML+      P      +     E    GD+ SA+    +A  
Sbjct: 574 RAAQLE-KSHGTRESLDAMLKKAVGYCPQAEVLWLMG-AKEKWLAGDVPSARAILQEAYA 631

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK--- 239
             P++  +  A  +      E  RA   L + ++            ++ R + N DK   
Sbjct: 632 AIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVEREIGNVDKERE 691

Query: 240 --------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                     G   A+      +L+ C +SI   + AA      
Sbjct: 692 LLEESLERFPQFHKLWLMLGQLKDRIGQPEAARDTYERALRNCPHSIPLWLSAAALEERL 751

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
               KA  +L K    N H PE+      +  E   G  K A  L     ++   S  + 
Sbjct: 752 GGLTKARAVLTKARLKNTHNPELWLA--AIRVEAHAGNKKEAESLMAKALQDCPSSGRLW 809

Query: 332 SKIALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNT--DKILYWTQSAL 386
           ++ A++M    Q  +K++ A+K     P       +A + +    +   DK   W   A+
Sbjct: 810 AE-AIDMAPRPQRKSKSVDALKRCDQDPYV-----IAAVAKLFWQDRKVDKARSWLNRAV 863

Query: 387 HAMPD 391
              PD
Sbjct: 864 TLAPD 868


>gi|113968729|ref|YP_732522.1| HemY domain-containing protein [Shewanella sp. MR-4]
 gi|117918840|ref|YP_868032.1| HemY domain-containing protein [Shewanella sp. ANA-3]
 gi|113883413|gb|ABI37465.1| HemY domain protein [Shewanella sp. MR-4]
 gi|117611172|gb|ABK46626.1| HemY domain protein [Shewanella sp. ANA-3]
          Length = 388

 Score = 73.8 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 141/409 (34%), Gaps = 44/409 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++ + +  +I + +C    +      V I  G+    TS    + +L  F   + +L  
Sbjct: 1   MIKALIFLGIILIGLCISPWIVGNTGYVYIAAGDYQLETSLVFGIIMLIVFYALFQVLEW 60

Query: 61  VSRFFLSCPAMLFHML----HKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVS--QQ 113
           +    ++   +L         +R   K +  +  G ++IA  + P A R M       + 
Sbjct: 61  LVITVINL--LLRSRFIPQHWRRRSAKKHTLI--GALAIAEEDWPAAERAMIKGADNGEL 116

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169
              +        + Q  +AER   +A  + + M         TR          +    D
Sbjct: 117 PALNLLAAARAAQHQNKIAERDQYLARAEAQPMTANAVATTRTRYLLKQGELALARAELD 176

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220
                + A  +   +P         ++ Y   ++W               L   K NA  
Sbjct: 177 -----KLAPTSKSKAPVLKLA----LELYRAQEDWEALKLLLPILKKRQILEDAKLNALS 227

Query: 221 WNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              + A+L  A     +  ++     S  +  +S  L           A  L   N+K +
Sbjct: 228 VETHCALLKAASLKGEDALEQCWQWLSRDERNQSEFLA--------IYAMGLCRFNRKDQ 279

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A  +L K  + +P   +  +   +++ +     K+ L+ E  ++ + +    ++ +  + 
Sbjct: 280 ALKLLSKKLRSSPESALLEVIPQIVTAHDEEIRKQLLKHEITHENNADYQKCLALLYQQT 339

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
             + +A        ++AP +  +L LA+I++             + A++
Sbjct: 340 RDMKEAKTCWQNVCRLAPSQASWLSLARIQE-QLGEQGNANQSYRQAVN 387


>gi|312884195|ref|ZP_07743906.1| HemY protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368123|gb|EFP95664.1| HemY protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 395

 Score = 73.8 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 68/229 (29%), Gaps = 8/229 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           MLRLI  F  I L +      +     V I   N     S   +L +    +   +LL  
Sbjct: 1   MLRLIVLFIFIGLGLYVGTQSAGQQGYVFIAIANTAIEMSVTTLLVVFIMLITGILLLSK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +      +       +R   +       G++     N  LA K  +     H      
Sbjct: 61  LIKKVWRFSSESCEFFGRRKVRQARALTNEGIIQFLEGNFKLAEKNVTRHVNHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A +   +    +    +         AV    S   +  R  D + A +  
Sbjct: 119 LCYLVASEAAESRGNHQD-RDHYLELASQQENSRLAVEITRS--KQYIRAQDYDLAYQTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
                  P    V   + Q YV  K W   +    +  K      + + 
Sbjct: 176 EPLFKTFPRNVIVLALLKQSYVQLKMWQPLLDLAPKLVKEKVITQQEKM 224


>gi|330952277|gb|EGH52537.1| HemY [Pseudomonas syringae Cit 7]
          Length = 414

 Score = 73.8 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 101/295 (34%), Gaps = 18/295 (6%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A+  G M +A      A++     ++  T  +  L Y+   + A  + +Y      LE  
Sbjct: 88  AIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDALLERA 145

Query: 147 LQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           L+     E A+      +      GD   A        +  P  P V   + + Y    +
Sbjct: 146 LERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQQRGD 203

Query: 204 WSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDAIESL 253
           WS  +  + + +K+     +  A L          L A           + S   A + L
Sbjct: 204 WSDVVRLMPELRKDKVLPAKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESAWQGL 263

Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
                     + A A  L     + +AE +L    K   +  +A +Y  +   + + +L+
Sbjct: 264 ASAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPLKQLQ 323

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            A    + +      L+ + +I L+     +A      ++++    E    LA++
Sbjct: 324 TAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378


>gi|226946764|ref|YP_002801837.1| HemY-like protein [Azotobacter vinelandii DJ]
 gi|226721691|gb|ACO80862.1| HemY-like protein [Azotobacter vinelandii DJ]
          Length = 410

 Score = 73.8 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 139/395 (35%), Gaps = 28/395 (7%)

Query: 1   MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M RL      VI+      + ++ +P  V   +    + +S +V L +L   + A+ +L 
Sbjct: 1   MSRLYLLLLVVIAGAALLGMAIAEHPGYVLFAYKGYRFESSLWVFLGLLLVLVAAFFVLR 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V     +   ++     +    +  +A   G   +A  N   A    +  +       +
Sbjct: 61  WVVGLIAASAGVVLPWSQRNRNRRARQAALHGQRDLAEGNWQQALHKLTRAAA---TDQQ 117

Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRY 176
            LV+ L   + A    +Y  + + L    +     E A+  L          +   A   
Sbjct: 118 PLVHYLGAARAANELGEYAQSDDLLRQAREREPKAEVAI-GLTQARLLIDRSEYRQALGV 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSR---AITFLNQKKKNAKEWNRNRAILLIARS 233
             +  +  P  P+    + + YV  ++W      +  L +++    +       L  A +
Sbjct: 177 LQQLNEDHPQQPYTLSLLQKLYVQLQDWPALCRLLPVLRKRRVLPADKLNGLEHLAWAAA 236

Query: 234 LENADKGDMIASYHD----------AIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           LE   KG++                   SL+   + + A     + L ++++   AE +L
Sbjct: 237 LEQIGKGELKEGETARSLVTGCWSQIPSSLQHDPDLLYAYATRLRELDAEDE---AEAVL 293

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
               K +    +A +Y  + S +   +L  A  L E        L+ + +++L     D+
Sbjct: 294 RAALKQHYEGRLAYLYGQVRSSDPARQLNLAHSLLEKQPNDPLLLLTLGRLSLVNEQFDK 353

Query: 344 AHAKAMLAMKIAPRKEIF----LLLAQIEQANSHN 374
           A      ++ ++   E       LLAQ+ +    N
Sbjct: 354 AREYLEASLALSRSAETCAELARLLAQLGETEHSN 388


>gi|238765352|ref|ZP_04626277.1| hypothetical protein ykris0001_16940 [Yersinia kristensenii ATCC
           33638]
 gi|238696439|gb|EEP89231.1| hypothetical protein ykris0001_16940 [Yersinia kristensenii ATCC
           33638]
          Length = 399

 Score = 73.4 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 55/366 (15%), Positives = 118/366 (32%), Gaps = 9/366 (2%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L   L A++++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARKQTRAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADTEQLPVNITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254
            +  +S  +  L      A+         L  ++      +   +           +  +
Sbjct: 199 RSGAYSSLLEIL-PAMSKAQVHTAEEIAALEQQAYIGIMNQCMAEEGSDGLKRWWKDQSR 257

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I   +  A+ LI  +    A+ I+    K      +  +   L S N     K  
Sbjct: 258 KVRHEIPLQVALAEHLIECDDSDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPLEKSL 317

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            +  + +  +      + ++ L+ G  ++A      A+   P    +  LA         
Sbjct: 318 RQHIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRP 377

Query: 375 TDKILY 380
            D    
Sbjct: 378 EDAAQA 383


>gi|297516669|ref|ZP_06935055.1| putative protoheme IX biogenesis protein [Escherichia coli OP50]
          Length = 216

 Score = 73.4 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 64/205 (31%), Gaps = 17/205 (8%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKN 217
              Q Y+    WS  +  +    K 
Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKA 216


>gi|90581039|ref|ZP_01236839.1| hypothetical HemY protein [Vibrio angustum S14]
 gi|90437735|gb|EAS62926.1| hypothetical HemY protein [Vibrio angustum S14]
          Length = 396

 Score = 73.4 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 53/393 (13%), Positives = 129/393 (32%), Gaps = 11/393 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++L+     +   I     ++     V I+  N+    S   ++ ++      ++LL  
Sbjct: 1   MIKLLLLVLALIAGIIVGPELAGNQGYVLISTANQTIEMSLTTLVVLIVALFAVFLLLEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +   S  +        R   K       GL+ +   +   A K+ +  ++        
Sbjct: 61  ILKRVFSISSSTRGWFSGRKVRKARIQTSAGLLKVTEGDWKPAEKLLTKSAK--FSDAPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L YL   + A    +     E L+   ++ +       +      R      A     + 
Sbjct: 119 LNYLAAAEAAQGLGKTEQRDEYLKQAAELDSQNLAVALTRAKLQIRQQQFEQALATLQEV 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS----LEN 236
                  P V   + + Y+  ++W   +T L Q  K         A+ L  ++    +++
Sbjct: 179 QQDHARNPIVLGLLQECYLKLEDWKSLLTLLPQLTKAGVISQ-EEAVALDEQAQCGQMQH 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             + +          ++   D    A   C  K +++++    A  IL    K +    +
Sbjct: 238 LGQQNGTDGLVGYWNNMGRKDKQNPALVACFIKQMMARHADSDAYPILRDALKKSQDERL 297

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++   L   +    + +   L   +  +  +   + ++ +  G+  +A      A+ + 
Sbjct: 298 ISLVPQLNLPDRHPAIVKLQELLRQDGNNAVTHSALGQMLMAEGNWQEAKEHFERAVAVR 357

Query: 356 PRKEIFL-LLAQIEQAN--SHNTDKILYWTQSA 385
           P    +  L+A +EQ +             + A
Sbjct: 358 PDMTDYAHLVATLEQLDDKQGAAAASRQALELA 390


>gi|95931033|ref|ZP_01313761.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95132929|gb|EAT14600.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 451

 Score = 73.4 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 63/437 (14%), Positives = 138/437 (31%), Gaps = 31/437 (7%)

Query: 4   LIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVS 62
           L+ +  V+ + +  F+  S   P++++I +      T P  ++ I    +  +I      
Sbjct: 3   LMSFLLVVIMFLAFFVFFSGINPQEMTIFFLPDSSVTYPVTVVVIGCILVGLFI---GYG 59

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALY----TGLMSIAAHNIPLARKMHSYVSQQHTFHN 118
                          +   +K  K +      G+  + + +I  A  +      ++    
Sbjct: 60  FHLYGALTYGMRNWLRGRGEKRNKEIETIYRDGVGRLLSGDIKKAHALLQKAIDKNPNKV 119

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E  + L    +   E     A   L     I       ++ L      +G+ +SA +   
Sbjct: 120 ESYIAL--ASVNTQEGNQQGAITLLRKAKSINGKSLEVLFKLAATYEDLGEDDSACKEIE 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIAR--- 232
           + L++  D      A+   ++  + W +A+    +  K     NR    +  LL  R   
Sbjct: 178 EILELEKDNRKAIRALRDLHMKHQRWEQALELQKRLLKAGPSGNRIQEEKEKLLSIRYEV 237

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + +     D   +     + +K       A +    +   QN    A +I +  +K    
Sbjct: 238 ARQKLANNDEDQAISSLKQIIKEAPEFTAARVTLGDAYAQQNNAEDAALIWQDSYKK--- 294

Query: 293 PEIAN-IY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             +   ++       ++  E+    L             +       K+ L +  +D+A 
Sbjct: 295 --LGRSVFLSRLENLYIEQEDPQSLLSFYSSALMARSNDLVLRFFYGKLCLRLEMVDEAL 352

Query: 346 AKAMLAMKIAPR-KEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISD-DGYLS 402
                    AP   +I LLLA+  +  +  +     Y     +       ++ D  G  S
Sbjct: 353 EHIYTVESSAPDFPQIHLLLAEAHRRRNRIDEAIGEYQKALGVDNQLSLGYVCDCCGTTS 412

Query: 403 SVWLPLSPISKTLCYFE 419
             W+       T   + 
Sbjct: 413 LEWMSRCEQCGTWGSYS 429


>gi|15676677|ref|NP_273821.1| hypothetical protein NMB0779 [Neisseria meningitidis MC58]
 gi|7226010|gb|AAF41192.1| hypothetical protein NMB0779 [Neisseria meningitidis MC58]
 gi|316983766|gb|EFV62747.1| tetratricopeptide repeat family protein [Neisseria meningitidis
           H44/76]
 gi|325140067|gb|EGC62596.1| hypothetical protein NMBCU385_1351 [Neisseria meningitidis CU385]
 gi|325200535|gb|ADY95990.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 407

 Score = 73.4 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 125/398 (31%), Gaps = 14/398 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387
           + + P     L+LA++  E       +        A+ 
Sbjct: 358 IALKPSISARLVLAKVFDEIGEPQKAEAQRNLVLEAVS 395


>gi|300714794|ref|YP_003739597.1| protein HemY [Erwinia billingiae Eb661]
 gi|299060630|emb|CAX57737.1| Protein HemY [Erwinia billingiae Eb661]
          Length = 396

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 122/385 (31%), Gaps = 30/385 (7%)

Query: 11  ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70
           I+ V+   + ++ +   V I   N    TS   +  IL   L   +++  V R  L    
Sbjct: 12  IAGVVLGPM-LAGHQGYVLIQTDNWNIETSVTGLAIILILSLIVILVVEWVLRRLLRTGV 70

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
                   R  ++  K     L+ +A  +     K+ S  +         + YLL  + A
Sbjct: 71  RTRGWFMGRKRNRARKQTNAALVKLAEGDYRQVEKLLSRNADHA--EQPVVNYLLAAEAA 128

Query: 131 LAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
                   +++ LE   +        +  TR               + ++A+    + L+
Sbjct: 129 QQRGDEIRSNQHLERAAELAGSDQLPVEITRV-------RIQLARNEDHAARHGVDRLLE 181

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P  P V     Q YV    WS  +  L   +K+      +R  L     L   ++   
Sbjct: 182 VAPRHPEVLRLAEQAYVRTGAWSALLDILPAMEKSQVSDEAHRLALQQEAWLGLMNQAMA 241

Query: 243 IAS----YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI----LEKIWKVNPHPE 294
                       +  +   N     +  A  LI  +    A+ I    L+K +       
Sbjct: 242 DQGSDGLKRWWQDQSRKTRNETALQVAMADHLIVCDDHETAQQIVLDGLKKAYDER---- 297

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +   L + N     K   +  + +  +      + ++ ++ G  +QA      A+K 
Sbjct: 298 LILLMPRLKTGNPEQLEKALRQQIKQHGATPLLHSTLGQLLMKHGEWEQAAEAFREALKQ 357

Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379
            P    +  LA          +   
Sbjct: 358 RPDAFDYAWLADTLDRQHKPEEAAQ 382


>gi|87118403|ref|ZP_01074302.1| hypothetical protein MED121_15289 [Marinomonas sp. MED121]
 gi|86166037|gb|EAQ67303.1| hypothetical protein MED121_15289 [Marinomonas sp. MED121]
          Length = 416

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 125/379 (32%), Gaps = 35/379 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M RL      + +V  +  I+       V + +GN    TS +V  + +   LF    + 
Sbjct: 1   MRRLFLIIVSVLIVGGTLGILMKQDTGYVLLAYGNITLETSIWVFSAFILVLLFVLSWVK 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +    L   + L  +    +  +  +    GL+ +   N   A K+ +  +        
Sbjct: 61  RILFASLKPGSSLAKLTGNLHQKRASRNTIRGLLELVGGNWSKAEKLLTKSASN--VPYP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            + ++     A  +     +   L E     P       ++      R G   SA     
Sbjct: 119 LINHIAAAYAASEQDNNERSKTLLREAHRSSPEAEFAISFAQSQIQMRQGHFESALATLL 178

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITF-----------------LNQKKKNAKEW 221
           +   I P    V + +VQ Y   ++W   +                   L +K  NA   
Sbjct: 179 RLHKIQPKHRQVLKMLVQAYSHLEDWQALLNLTPLLKKEGILNDSNMLDLEKKAFNALLE 238

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE- 280
           + +   L      +     D +    D +E  +         I  AK+++    + KAE 
Sbjct: 239 HFSHKSLQGHSHSDILKTIDTVWQKLDGLEDDENM------RITYAKAMLEFGDESKAES 292

Query: 281 ---VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
                L K+W       +  +Y  +  +N    L++A      +K+S E L+   +++  
Sbjct: 293 FIRKCLNKLWSDQ----LVLVYGQIEHKNAKKALQQAESWLSKHKDSAELLLTCGRLSQM 348

Query: 338 MGSIDQAHAKAMLAMKIAP 356
           +    +A      ++ + P
Sbjct: 349 LQLWGKARDYYQSSIDLQP 367


>gi|73540051|ref|YP_294571.1| TPR repeat-containing protein [Ralstonia eutropha JMP134]
 gi|72117464|gb|AAZ59727.1| TPR repeat [Ralstonia eutropha JMP134]
          Length = 616

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 88/258 (34%), Gaps = 47/258 (18%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL- 228
              A   A    DI+P +P   + +    VL   WS A   L+Q+  +    +R  +IL 
Sbjct: 126 PQQALDAARLWADIAPASPAARQVLSTLLVLNGRWSEARPLLSQQLSSVPANHRGESILQ 185

Query: 229 -------------------------------LIARSLENADKGDMIASYHDAIESLKLCD 257
                                           +A +      G+   +     E+L+L  
Sbjct: 186 LQQQMSRTSDPAGAATLLQDLTRDDTRLPETHLAIARAQEIAGNTPGALSALDEALRLRP 245

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           +   A++  A+ L ++++  KA   L +    +P     H  +A +Y  + ++    + +
Sbjct: 246 DFEPAALMVAE-LRAEDEPDKAIAGLRRFLDKSPRSVNGHITLARLYL-MRNDMPAAR-Q 302

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE---IFLLLAQ 366
               L ++        + +   +L+     +A       +++A   P       F  LAQ
Sbjct: 303 EFETLRKVAPADPRVPLALGLTSLQAKEYGEAEQYLKEYLQLAAKVPTANPDIAFQYLAQ 362

Query: 367 IEQANSHNTDKILYWTQS 384
           I +    +    + W + 
Sbjct: 363 IAE-ERKDYAGAIQWLER 379


>gi|94501429|ref|ZP_01307948.1| uncharacterized enzyme of heme biosynthesis [Oceanobacter sp.
           RED65]
 gi|94426394|gb|EAT11383.1| uncharacterized enzyme of heme biosynthesis [Oceanobacter sp.
           RED65]
          Length = 411

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 14/205 (6%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             + I++ N +  TS +V +  L   + A   +  +    L  P+ L     +R  +   
Sbjct: 27  GYILISFQNWVIETSLWVFILSLLASVLAIYGVIHLINNLLKTPSTLQDWRGRRGINVAI 86

Query: 86  KALYTGLMSIAAHNIPLARK--MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
                GL+++A      A K  M     +    +     YL   + A     Y  + E +
Sbjct: 87  AKTVRGLIALAEGQWQQAEKYLMAGAKGKGKIIN-----YLAAARAAQYRGDYEHSDELI 141

Query: 144 EMMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                  +T+       +     +  R      A     +     P   +V + +++ Y 
Sbjct: 142 AQ--ATKSTKGADLAVGLQHAQLQIERE-QYEQALATCLRLKKQFPKHQFVNKMLLKAYT 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRN 224
              +W   +  L Q  K+     + 
Sbjct: 199 ALDDWQAVLDILPQLNKHKILPTKK 223


>gi|325576795|ref|ZP_08147410.1| HemY protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161001|gb|EGC73119.1| HemY protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 428

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 11/169 (6%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R++ +  +  L        +S     V I   N +Y  S   ++      L     L 
Sbjct: 1   MFRVL-FLMIALLAGLIAGPYLSGQQGYVRIETANTIYEMSLTTLVIFFVVALAIIYTLE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +   F    +  ++   +R   K  +    GLM +   +   A K+    ++      E
Sbjct: 60  WIVTRFFRLSSNTYNWFSRRKRVKAQRQTLEGLMKMNEGDYAKAEKLIGKNAKHSA---E 116

Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            ++ L++  + A        A+  L     I AT      +L  E  R 
Sbjct: 117 PVLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIART 160


>gi|170718233|ref|YP_001785254.1| HemY protein [Haemophilus somnus 2336]
 gi|168826362|gb|ACA31733.1| HemY protein [Haemophilus somnus 2336]
          Length = 425

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 102/331 (30%), Gaps = 53/331 (16%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    V+   +     +S     V I   +     S  +++      +    L+  
Sbjct: 1   MFRVLFLMLVLLAGLIGGPYLSGKQGYVLIQTASYNIEMSITMLVIFFVILMAIVYLIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V   F       +    +R   K  +    GL+ +   +   A K+    ++        
Sbjct: 61  VVTRFFRLSNNTYSWFSRRKRVKAQRQTLEGLVKMNEGDYFKAEKLIGKNARH--SDKPI 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQ 174
           L  +   + A       +A+  L     I AT      SL  E        +   L +A+
Sbjct: 119 LNLIKAAEAAQQRGDDFVANRYL-----IEATELAGTDSLIVEIARTRILLQQNKLPAAR 173

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEW-----------------SRAITFLNQKKKN 217
                 L+++     V +  V+ Y+ +  +                 S   T L +K ++
Sbjct: 174 SSVDSLLEMTSRNKEVLKLAVKIYLKSAAFHALDKILDQIEKVGLYSSDEFTALQRKVED 233

Query: 218 A---------------------KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                                     RN   + +       D  D  ++Y  AI++LK  
Sbjct: 234 GLLDEKMNEEGVDGLLRWWDEQPRKRRNDLYVKVGLIRRLLDSDDHESAYELAIDALKKV 293

Query: 257 DNSIMASICAAKSLISQ--NKKRKAEVILEK 285
           +NS+ A++     +         K   +LEK
Sbjct: 294 ENSVEANVALCTQITRLQPEDNSKLLKLLEK 324


>gi|167031232|ref|YP_001666463.1| HemY domain-containing protein [Pseudomonas putida GB-1]
 gi|166857720|gb|ABY96127.1| HemY domain protein [Pseudomonas putida GB-1]
          Length = 412

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 127/365 (34%), Gaps = 14/365 (3%)

Query: 19  IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78
           I V+ +   V I++G   Y++  +  L+ L   +    LL  +    L+   ++     +
Sbjct: 20  IAVAKHSGYVLISYGGFRYQSGLWAALAGLLAVVALLWLLRYLVGLVLTSSGVVNPWSRR 79

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
               +   A+  G + +A      A++ +H     +       L YL   + A  + +  
Sbjct: 80  NRSRRIRVAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
            +   LE  L+     E A+   + +     G+ + A        +  P    V   + +
Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGETDGALETLLAMQERHPHNSQVLRLLQR 196

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248
            Y+   +WS  I  L   +K         A L        L   +    D      +   
Sbjct: 197 LYLERGDWSALIRLLPDLRKGKVLPPAELAALEQRAWGQNLSLATTRGEDAQTARQALER 256

Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           A + L          + A A+ L     + +AE +L    K      +A +Y  +  ++ 
Sbjct: 257 AWQQLTAAQRQEPQLVLAYAEQLRQVGAQSEAEHVLRTALKREYESHLARLYGLVRGDDP 316

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
             +L+ A    + + +    L+ + +++L+     +A      ++++    E    LA++
Sbjct: 317 ARQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARL 376

Query: 368 EQANS 372
                
Sbjct: 377 LAGLG 381


>gi|318607649|emb|CBY29147.1| homolog of E. coli HemY protein [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 399

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 117/365 (32%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L   L A++++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDQTPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKL 255
            +  +S  +  L    K         A L     I    +   +           +  + 
Sbjct: 199 RSGAYSSLLEILPAMSKVQVHTAEEIAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L S N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDSDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPIEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QHIKQHGATPLLNSTLGQLMLKHGEWEKASETFKAALAQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|83749205|ref|ZP_00946207.1| HemY protein [Ralstonia solanacearum UW551]
 gi|207742666|ref|YP_002259058.1| protein porphyrin biosynthesis [Ralstonia solanacearum IPO1609]
 gi|83724146|gb|EAP71322.1| HemY protein [Ralstonia solanacearum UW551]
 gi|206594060|emb|CAQ60987.1| protein porphyrin biosynthesis [Ralstonia solanacearum IPO1609]
          Length = 397

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/400 (13%), Positives = 119/400 (29%), Gaps = 18/400 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S  V+L+ L     A  LL  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNVVLAALVLVFVAMHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    +   AL   + S+ A     A ++              
Sbjct: 61  LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQVWDV--QRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E     A             +  ++  L  ++    D + A     
Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236
           +               ++ +   K W+  +      +K         A L  +   +L  
Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHAVLAARLKQMACETLLQ 235

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             + D  A      E       S   +  AA       +  +A+ I+E   K +    + 
Sbjct: 236 ERRHDTDALNDFWRELTAEERRSPRIASLAALYFAQLGRTDEAKRIVEDALKAHWDGRLI 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +    +  +++A +    +    +    +  +  +     +A +    A+K A
Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355

Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                   R    L LAQ+ +      +   ++ QSAL A
Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRPEESQRHFRQSALLA 395


>gi|300703403|ref|YP_003745005.1| protoheme ix synthesis protein (hemy) [Ralstonia solanacearum
           CFBP2957]
 gi|299071066|emb|CBJ42375.1| putative protoheme IX synthesis protein (hemY) [Ralstonia
           solanacearum CFBP2957]
          Length = 397

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/400 (13%), Positives = 117/400 (29%), Gaps = 18/400 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S   +L+ L     A  LL  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLAALVLVFVAMHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    +   AL   + S+ A     A ++              
Sbjct: 61  LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQAWDV--QRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E     A             +  ++  L  ++    D + A     
Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236
           +               ++ +   K W+  +      +K         A L  +   +L  
Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHAVLAARLKQMACETLLQ 235

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             + D  A      E       S   +  AA       +   A+ I+E   K +    + 
Sbjct: 236 ERRHDTDALNDFWRELTAEERRSPRIASLAALYFAQLGRTDDAKRIVEDALKAHWDGRLI 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +    +  +++A +    +    +    +  +  +     +A +    A+K A
Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355

Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                   R    L LAQ+ +      +   ++ QSAL A
Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRPEESQRHFRQSALLA 395


>gi|88705505|ref|ZP_01103215.1| protein porphyrin [Congregibacter litoralis KT71]
 gi|88700018|gb|EAQ97127.1| protein porphyrin [Congregibacter litoralis KT71]
          Length = 411

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/372 (15%), Positives = 124/372 (33%), Gaps = 22/372 (5%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ V    +I +  P  + I +G     TS +V + ++   +             ++
Sbjct: 2   LALVAGVGIVALIETE-PGYLLIAYGGYTVETSFWVGILLIATVVLLLYASLRFLHRLIT 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
            PA + +   +R   +  +    G ++    N   +RK    +       +  L YL+  
Sbjct: 61  SPANVLNWAGERRLRQSARLTGRGTINFIEGNWAKSRK--QLLRGAKYSESPLLNYLMAA 118

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGD--LNSAQRYATKALDI 183
           + +    +          ++Q   +   AV +  L     ++ D     A R    A   
Sbjct: 119 RASY---RLQEPEAMSRQLMQAAESDLEAVIAVDLTQAELQLNDRQYEKALRTLETAKKN 175

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLENADK 239
               P V   + + Y    +    +  L   +K     A E +   A +      + A  
Sbjct: 176 PGKHPQVLHLLCRVYDGLGDIEAMLDLLPLLRKYRIGGALELDDLEAKIHHDLLEQAAVT 235

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK----RKAEVILEKIWKVNPHPEI 295
           GD         +      +     +    +L+  ++     R+ E  L+K WK    P +
Sbjct: 236 GDTELLKSRWKKYPGRLVDEESVQLHYLSALLRCDEVTIVEREIERRLKKNWK----PAL 291

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++Y  +  E    +L  A      + +  E L+ + ++A+      +A      +    
Sbjct: 292 VSLYGRINRETAQKQLATAETWLRKHDKDPELLLCLGRLAMVERQWAKARDYLERSYAAN 351

Query: 356 PRKEIFLLLAQI 367
             +E  L L ++
Sbjct: 352 ASEEACLELGRL 363


>gi|134094244|ref|YP_001099319.1| hypothetical protein HEAR1010 [Herminiimonas arsenicoxydans]
 gi|133738147|emb|CAL61192.1| Putative protoheme IX synthesis protein (HemY) fused with Protein
           prenyltransferase [Herminiimonas arsenicoxydans]
          Length = 398

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/397 (13%), Positives = 114/397 (28%), Gaps = 31/397 (7%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R+  +   +        +V+   P +V   +       S    L +     F   L+  
Sbjct: 1   MRIFLWLIALFATAIGLAVVARFNPGNVVFFYPPYRIDLSLNFFLLLAVLLFFLIYLVLK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P  +     ++   KG +AL   L +         R  H+  +      +  
Sbjct: 61  TLRVAQGMPGRVAAYRREKRERKGNQALRESLKAYFEG-----RFGHAEKAAMRATESPE 115

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD---LNSAQRYA 177
              L  +  A A  +      +   +  +   +      L      + D      A    
Sbjct: 116 NAGLAALIAARAAHRMQQTERRDTWLATVEEDQTLKTARLMTAIELLVDERQPELALDVV 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +               ++    A  W   +  +    KN            ++  L   
Sbjct: 176 KELNANGTRHIHALRMALKANQRAGNWPEVLRLVRTLDKNNALHP------ALSSRLREL 229

Query: 238 DKGDMIASYHDAIESLKLCDNSIMA--------SICAAKSLISQNKKRKAEVILEKIWKV 289
              D++ +  +  E+++    SI A        +  AA++   +  + +A  I+EK    
Sbjct: 230 AYQDLLKNPSNDEEAIRNVWLSIPAEDRIKPFVAAHAAEAFTKRGLQDEARAIVEKALAA 289

Query: 290 NPHPEIANIYTHLLSENTVGKL----KRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                +   Y           L    +R     + +    E  + +  + L      +A 
Sbjct: 290 EWDDRLLRAYRAAAGAEGTPALLGQIERCEEWVKKHPADPELALTLGTLCLRQNLWGKAQ 349

Query: 346 AKAMLAMKIAPRKEIF----LLLAQIEQANSHNTDKI 378
            +   A+  A    +     L LAQ+ +A +H  +  
Sbjct: 350 RQLEQALSDASGARMLQEVHLKLAQLHEALNHTEEAA 386


>gi|110835180|ref|YP_694039.1| hemY protein [Alcanivorax borkumensis SK2]
 gi|110648291|emb|CAL17767.1| hemY protein [Alcanivorax borkumensis SK2]
          Length = 410

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 116/382 (30%), Gaps = 21/382 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           L+    +++ +      ++     V I        T+   ++ +      A ++L  +  
Sbjct: 6   LLIIIALVAALALG-RWMAADSGYVLIIRDTMSVDTTLGFVVLMALLGAVALVVLTLLGN 64

Query: 64  FFLSC--PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
              +   P        ++  ++    L +G + +    +  A ++ +   ++       +
Sbjct: 65  TAWNLMEPVRATRRWKRKVAERR---LRSGFLQLVDGELEKAERLLAAAGEE--GDWPLV 119

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYATK 179
            +LL  + A  + + +++ + LE        R  A   L     +   G    A+     
Sbjct: 120 AWLLAAEAAQEQDKVDVSQQYLEQASADRRGRLVA--GLMKARFALDDGHPEQARSELKV 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWS---RAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             D++P    +     +     K+W      +  L +      +  R R   L       
Sbjct: 178 LADMAPRNKRILNTYAEVLERQKDWQTLCGLMPRLKRAFGENDQARRERKAWLAWLQETA 237

Query: 237 ADKG--DMIASYHDAIESLKLCDNSI---MASICA-AKSLISQNKKRKAEVILEKIWKVN 290
              G  D  +   +  +  K     +    A +   A  L      R A  ++ +     
Sbjct: 238 RKPGFNDADSRREELRKLWKDVPVRLKNDPAMVARYAGFLAQLGGGRGALNLVREQLDSQ 297

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               +  +   +   +    L+   +       +   L+   ++AL+     +A      
Sbjct: 298 WDDRLPPVLEAIDDISPDDLLQVLEKWLVERPGNAAVLITAGRVALKARLWGKAQGFFEA 357

Query: 351 AMKIAPRKEIFLLLAQIEQANS 372
           A   +        LA++ +A  
Sbjct: 358 AANSSQSATALAELARLYRALG 379


>gi|330444904|ref|ZP_08308559.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489214|dbj|GAA03056.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 394

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 129/393 (32%), Gaps = 11/393 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++L+     +   I     ++     V I+  N+    S   ++ ++      ++LL  
Sbjct: 1   MIKLLLLVIALIAGIVVGPEIAGNQGYVLISAANQTIEMSLTTLIILIVALFAVFLLLEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +   S  +        R   K       GL+ +   N   A K+ +  ++        
Sbjct: 61  ILKRLFSLGSSTRGWFSGRKVRKARIQTSEGLLKVTEGNWKPAEKLLAKSAK--YSDAPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L YL   + A    +     E L+   ++ +       +      R      A     + 
Sbjct: 119 LNYLAAAEAAQGLGKTEQRDEYLKQAAELDSQNLAVALTRAKLQIRQQQFEQALATLQEV 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS----LEN 236
                  P V   + + Y+  ++W +++  L  +   A       A  L  R+    +++
Sbjct: 179 QQEHARNPIVLGLLQECYLKLEDW-KSLLTLIPQLTKAGVITAEEATALDERAQCGQMQH 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             + +          ++   D    A   C  K +++++    A  +L    K +    +
Sbjct: 238 LGQQNGTDGLVGYWNNMGRKDKQNPALVACFIKQMMARHADNDAYPVLRDALKKSQDERL 297

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++   L   +    + +   L   +  +  +   + ++ +  G+  +A      A+ + 
Sbjct: 298 ISLVPQLNLPDRHPAIVKLQELLRQDGNNAATHSALGQMLMAEGNWQEAKDHFEKAVAVR 357

Query: 356 PRKEIFL-LLAQIEQAN--SHNTDKILYWTQSA 385
           P    +  L+A +EQ +             + A
Sbjct: 358 PDMTDYAHLVATLEQLDDKQGAAAASRQALELA 390


>gi|238028330|ref|YP_002912561.1| HemY domain-containing protein [Burkholderia glumae BGR1]
 gi|237877524|gb|ACR29857.1| HemY domain protein [Burkholderia glumae BGR1]
          Length = 398

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/398 (13%), Positives = 132/398 (33%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPED-VSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  V  +   V  +    V I +       S  + +  +         L  
Sbjct: 5   LRGILWLAVLFAVAVALATVGRFDGGQVLIVYPPYRVDVSLNLFIVAIVVLFVVLYALLR 64

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K + +L   + ++ A     A K            N+ 
Sbjct: 65  IVRNVWRMPQRVAAYRARMRREKAHASLRDAIANLYAGRFSRAEKAARDALAVDA--NQG 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+    A    +Y    E L  +        R  A   +  E+    D   A     
Sbjct: 123 AASLVGAVAAHRMHEYARRDEWLAKVDGNDWQEARLLATAEMRAEAR---DAEGALAALA 179

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K W+  +  L +  +  +  +   A+ +  ++ E+  
Sbjct: 180 EMQQSGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRMRQQAAEHLL 238

Query: 238 -DKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            D+     +  +  +SL    +        +  AA+ L++ +++ +A  I+E     +  
Sbjct: 239 RDRRHDADALLEVWQSLSAPERQSPRL---ADLAAELLVALDRQPEARRIVEDALAHHWD 295

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y   +S + +  +++A      + +  + L+ + ++  +     +A +    A+
Sbjct: 296 ARLLRRYPDTVSGDALPLIQKAEGWRRDHADDADLLMALGRLCQKQQLWGKAQSFLEAAL 355

Query: 353 KIAPR----KEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K++            LA + +          ++ +SAL
Sbjct: 356 KLSDNDALKVRAHRALASLFEHLGDTDKAARHYRESAL 393


>gi|209693829|ref|YP_002261757.1| protein HemY [Aliivibrio salmonicida LFI1238]
 gi|208007780|emb|CAQ77902.1| protein HemY [Aliivibrio salmonicida LFI1238]
          Length = 393

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/387 (13%), Positives = 113/387 (29%), Gaps = 16/387 (4%)

Query: 1   MLRLIRY-FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+RL+     ++  +I      +     V I+        S   ++  +   +    LL 
Sbjct: 1   MIRLLLLAIVLVGGLIVGTT-FADQQGYVLISVAEITIEMSLTTLVLFIGALIAGLFLLE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V +  LS           R+  K     + G++ +       A ++ +   + + F   
Sbjct: 60  IVVKRILSVSNFTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAERLITKGGRHNDF--- 116

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYA 177
            L+  L    A   RQ+    +    +         AV +L       R      A    
Sbjct: 117 PLLNYLAAAEAAQGRQHIEQRDAYLKLASEQPGSHLAV-ALTSAKLQMREEQYEFALATL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR----- 232
                  P  P + + +   Y+   EW +A+  +             +A+ L  +     
Sbjct: 176 QSVNVDYPHNPVLLDLLKDCYLALNEW-QALKNIIHPLTKGNLITEQQALELEEKVECGI 234

Query: 233 -SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +L   +KG             K     I   +C  + L ++    +A ++L    K   
Sbjct: 235 LALIATNKG-TTGLLDHWQSLPKKLKKHIPILVCLIRQLHNRKADSEAYILLRDNLKKRN 293

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +   L   +          L   +  +      ++++ +       A      A
Sbjct: 294 DDRLIELLPTLNLPDYHPATVLLEDLARYDIRNPIIQSTLAQLYMRTQKWQPAREHFEAA 353

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKI 378
           + I      +  LA++    +      
Sbjct: 354 LAIREDMSDYAYLARVLDKQNRKQAAA 380


>gi|291612742|ref|YP_003522899.1| HemY domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291582854|gb|ADE10512.1| HemY domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 386

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 130/397 (32%), Gaps = 40/397 (10%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61
           +R + +F  +     + ++V+  P  V   +       S      IL        +L  +
Sbjct: 1   MRWLFWFLGLFAAAVAVMLVARNPGYVQFVYPPYRLEVSLTFFALILLAAFGLGYILLRL 60

Query: 62  SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
           +   L+ PA + +   +R  +KG  A+   L +        A    + V          L
Sbjct: 61  TFVTLNLPAYVRNFRAERAANKGRTAMIEALRAYF--EGRFAAAEKAAVRAMELGEKSGL 118

Query: 122 VYLLEVQIA--LAERQYNIA-----------HEKLEMMLQIPATREFAVYSLYFESCRIG 168
             ++  + A  L +     A              + +M +   T       L  +     
Sbjct: 119 NSIVAARAAHELRQFDRRDAYLADAEGKTVGETTMRLMAK---TEF-----LLDQKQPQS 170

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            LNS +  +   +             ++    A+ W   +  + Q +K            
Sbjct: 171 ALNSLKELSDSGMH---KHIGALSLELKAQQQARNWDAVLEVMAQLEKRNAIDK------ 221

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIM--------ASICAAKSLISQNKKRKAE 280
            +A  L      + + S    I +L+    SI          +  AA+S       + A+
Sbjct: 222 AVASQLRQQAWLEKLRSQATDINALRSMWKSIPGEFKRRSKIAAAAAESFSKLGDCKSAQ 281

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            +L +    N   E+  +Y    +EN   ++++A    + + +    L+ + K+ +    
Sbjct: 282 QLLAESLNANWDSELVALYGECHNENNTAQIEQAESWLKQHTDDPGLLLALGKLCMHQQL 341

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
             +A +    ++ +   +E +  L Q+ +    + + 
Sbjct: 342 WGKAQSYLDASLSLEASREAYATLGQLAEKMGKHEEA 378


>gi|225075722|ref|ZP_03718921.1| hypothetical protein NEIFLAOT_00738 [Neisseria flavescens
           NRL30031/H210]
 gi|224952993|gb|EEG34202.1| hypothetical protein NEIFLAOT_00738 [Neisseria flavescens
           NRL30031/H210]
          Length = 407

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/383 (13%), Positives = 126/383 (32%), Gaps = 26/383 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  +V +     + R +    +  L   +F    L  
Sbjct: 1   MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58

Query: 61  VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116
             +F       PA +      R   +   +L +  ++        A +  + V Q     
Sbjct: 59  -IKFVFGLLNIPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEAAKVLQNKEAG 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175
            N  L  +L    A     + +    L  +  +P  ++ + + L  E +    D  +A +
Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALSRRDYPTAAQ 177

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233
               A  I+ +   +    ++      + S  +    +  K     ++   +      R 
Sbjct: 178 NLEAAAKINSNLSRLVRLQLRYAFDHGDASDVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237

Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L  E  D G + A      ES+K   LC       +  A+          A   ++  + 
Sbjct: 238 LLSEVTDAGSLKACLKHIPESMKSGELC-------VAIAEKYERLGLYADAVKWVKTHYP 290

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344
               PE+   +   +   +  + ++A+ L     +   ++   L+ + ++A       +A
Sbjct: 291 QTRQPELLEAFVESVRFLSEREQQKAIDLADSWLQEQPDNAPLLMYLGQLAYGRKLWGKA 350

Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367
                 ++ + P     L+LA++
Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373


>gi|207723610|ref|YP_002254008.1| protein porphyrin biosynthesis [Ralstonia solanacearum MolK2]
 gi|206588813|emb|CAQ35775.1| protein porphyrin biosynthesis [Ralstonia solanacearum MolK2]
          Length = 397

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/400 (13%), Positives = 118/400 (29%), Gaps = 18/400 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S   +L+ L     A  LL  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLAALVLVFVAMHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    +   AL   + S+ A     A ++              
Sbjct: 61  LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQVWDV--QRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E     A             +  ++  L  ++    D + A     
Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236
           +               ++ +   K W+  +      +K         A L  +   +L  
Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHAVLAARLKQMACETLLQ 235

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             + D  A      E       S   +  AA       +  +A+ I+E   K +    + 
Sbjct: 236 ERRHDTDALNDFWRELTAEERRSPRIASLAALYFAQLGRTDEAKRIVEDALKAHWDGRLI 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +    +  +++A +    +    +    +  +  +     +A +    A+K A
Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355

Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                   R    L LAQ+ +      +   ++ QSAL A
Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRPEESQRHFRQSALLA 395


>gi|291615712|ref|YP_003518454.1| HemY [Pantoea ananatis LMG 20103]
 gi|291150742|gb|ADD75326.1| HemY [Pantoea ananatis LMG 20103]
          Length = 398

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 119/391 (30%), Gaps = 21/391 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML++   F ++   I    +++ +   V I   N    TS   +  IL   L   + +  
Sbjct: 1   MLKVFILFVLLIAGIVLGPMIAGHQGYVLIQTDNWNVETSVTGLAIILIISLLVILAVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R      A        R   +  +     LM +A  +     K+ S    +H      
Sbjct: 61  ILRRLFRTGARTRGWFTGRKRRRAQRHTQNALMKLAEGDFRQVEKLLSK-DAEHA-DVPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172
             YLL  + A        A++ LE   +        +  TR               + ++
Sbjct: 119 ANYLLAAEAAQQRGDEMRANQHLERAAELAGNDVIPVEITRT-------RIQLARHEDHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    + L+++P  P V     Q YV    WS  +  L   +K+       R +L    
Sbjct: 172 ARHSIDRLLEVAPRHPEVLRLAEQAYVRTSAWSALLDILPAMEKSEVGTEEQRTLLQQQA 231

Query: 233 SLENADKGDMIAS----YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            L   ++                  +   +     +     LI  +    A+ IL    K
Sbjct: 232 WLGLMNQAMADQGSEGLKRWWGNLSRKTRHETSLQVAMIDHLIECDDHDTAQDILLDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            +    +  +   + S N     K   +  + +  +      + ++ +  G   QA    
Sbjct: 292 RHYDDRLVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAAEAL 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             A+   P    +  LA +        +   
Sbjct: 352 QQALAQRPDAFDYAWLADVYDRLRRPEEAAK 382


>gi|254447552|ref|ZP_05061018.1| HemY domain protein [gamma proteobacterium HTCC5015]
 gi|198262895|gb|EDY87174.1| HemY domain protein [gamma proteobacterium HTCC5015]
          Length = 395

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 127/375 (33%), Gaps = 18/375 (4%)

Query: 15  ICSFIIVSHYPEDVSITWGNRLYRT-SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLF 73
           I     +++      I+ G       +  V+L +       + L   ++R     P    
Sbjct: 15  IALAWTLANLDGYFLISLGGWQIENDNLIVLLILALLLFSVFWLALRIARTAWKLPDNFA 74

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
               KR     +K+L  GL+ +       A      ++         L YL   + A  +
Sbjct: 75  AYSEKRRQAAAHKSLSQGLIDLI--ECRWASAEKQLLAHIDYSETPLLNYLGASRAAAQQ 132

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWV 190
             +    + L+   +     + A+  L  ++           A    ++   I+P   +V
Sbjct: 133 NAFERRDQYLKAAHESDGKADVAI--LLTQADLQLSHQQTEQALATLSRLRQIAPRHGYV 190

Query: 191 TEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARS--LENADKGDMIASYH 247
            + + + +   +EW + A      KK +     +  ++ L      LE+A K  +  S  
Sbjct: 191 LKLLSRLHHQLREWDKLARILPELKKSDVLTPEQLESLQLDTYKGMLEDAAKNRVDQSLG 250

Query: 248 DAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           DA     + L+  +  +      A +L+SQ   ++AE ++      +    +  +Y  L 
Sbjct: 251 DAWSSLPKVLRKDNRLV---AVYANALVSQGDHQQAEKLIRSTLVKHWDENLVRLYGQLD 307

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             N    L+           S   L+ +++I        ++      AM +AP  EI   
Sbjct: 308 VPNNSKLLEHCDAWLSQQPNSPALLLALARINRREELWGRSEEYYRKAMHLAPDAEICAE 367

Query: 364 LAQIEQANSHNTDKI 378
           L  +      +++  
Sbjct: 368 LGDMLDKLGRSSEAA 382


>gi|323500168|ref|ZP_08105113.1| heme biosynthesis protein [Vibrio sinaloensis DSM 21326]
 gi|323314797|gb|EGA67863.1| heme biosynthesis protein [Vibrio sinaloensis DSM 21326]
          Length = 392

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 125/383 (32%), Gaps = 20/383 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R+I  F V+   + +    S     V I+  ++    S   ++  +   L A   L  
Sbjct: 1   MFRIIFLFVVLGAGLFAGTQFSGQQGYVLISIADKTIEMSVTTLVIFVIAALAALFALEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LIKKALYASSATWNYFSVRKMRRSRRYTNEGIVKLLEGDFQQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177
           L YL+  + A          ++   +       + AV        +  R  D NSA    
Sbjct: 119 LCYLVASEAAQGLGDKEK-RDRYLELASQQENAQLAVELTR--AKQQVREADFNSAFDTL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           +      P+   V   +   Y+  K W   +  L      AK  ++   + L  R+    
Sbjct: 176 STLKSSYPNNTIVLNLLKTVYMELKLWQPLLDAL-PNLVKAKVVSKQEQVELTLRAQCGL 234

Query: 238 DKGDMIASYHDAIESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
                     + + S         K   + +    C AK LI++    +A  ++++  K 
Sbjct: 235 LADVAEQKGSEGLISHWNGLPRKLKNDSHLVE---CFAKQLIARKADSEAFTLVKENIKK 291

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +P+ E+  +   +   ++   +         +  +  +   +++  L      +A     
Sbjct: 292 HPNSELYALLPEMNLADSHPAIVFLEDALRKDGNNAAAHSALAQFHLRDEKWTEAQQHFE 351

Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372
            A+ +      +  LA   +  +
Sbjct: 352 KALSVRSDVSDYAYLADALEKQN 374


>gi|256821391|ref|YP_003145354.1| HemY domain-containing protein [Kangiella koreensis DSM 16069]
 gi|256794930|gb|ACV25586.1| HemY domain protein [Kangiella koreensis DSM 16069]
          Length = 408

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 109/315 (34%), Gaps = 17/315 (5%)

Query: 62  SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
            R+ L    +  +    RN  K  +    G++++A  +   A K+ +  +Q     N  L
Sbjct: 62  IRYLLRTSNLTLNWFGDRNLRKARQNTIDGMIALAEGHWKTAEKLLAKGAQIR---NTKL 118

Query: 122 VYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYAT 178
           +  L   + A  +         L +  +     + A+  L       +      A    +
Sbjct: 119 INYLAAARAAQEQGNDKGRDHYLHIAAKTQPDAQVAI-GLTQAQLQMQHKQYEQALATLS 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
              DISP  P+V + + Q Y    +W   I  L + +KN    +     + I        
Sbjct: 178 HLRDISPHHPYVLKLLYQLYARLNDWQHVIDILPKLRKNRVFESSELNTIEILAWNHQLQ 237

Query: 239 KGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           K    A++    E        L+         +   ++L    + ++ EV+++   K   
Sbjct: 238 KQAETANFDKLSEFWSSIPNHLRKSPEL---ELTYGRALAQLQQDQELEVLVKDSVKHQW 294

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+  ++  + +      L  A    +    +   L  + K+AL+     +A +    +
Sbjct: 295 QDELIQLFGDIDTPQPDKTLAYAEGWLKQKPHNAVLLATLGKLALKAQLWGKAKSYLEQS 354

Query: 352 MKIAPRKEIFLLLAQ 366
           + I P  E    LAQ
Sbjct: 355 LAIIPSAEAHYYLAQ 369


>gi|327395977|dbj|BAK13399.1| protein HemY [Pantoea ananatis AJ13355]
          Length = 385

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 119/391 (30%), Gaps = 21/391 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML++   F ++   I    +++ +   V I   N    TS   +  IL   L   + +  
Sbjct: 1   MLKVFILFVLLIAGIVLGPMIAGHQGYVLIQTDNWNVETSVTGLSIILIISLLVILAVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R      A        R   +  +     LM +A  +     K+ S    +H      
Sbjct: 61  ILRRLFRTGARTRGWFTGRKRRRAQRHTQNALMKLAEGDFRQVEKLLSK-DAEHA-DVPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172
             YLL  + A        A++ LE   +        +  TR               + ++
Sbjct: 119 ANYLLAAEAAQQRGDEMRANQHLERAAELAGNDVIPVEITRT-------RIQLARHEDHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    + L+++P  P V     Q YV    WS  +  L   +K+       R +L    
Sbjct: 172 ARHSIDRLLEVAPRHPEVLRLAEQAYVRTSAWSALLDILPAMEKSEVGTEEQRTLLQQQA 231

Query: 233 SLENADKGDMIAS----YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            L   ++                  +   +     +     LI  +    A+ IL    K
Sbjct: 232 WLGLMNQAMADQGSEGLKRWWGNLSRKTRHETSLQVAMIDHLIECDDHDTAQDILLDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            +    +  +   + S N     K   +  + +  +      + ++ +  G   QA    
Sbjct: 292 RHYDDRLVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAAEAL 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             A+   P    +  LA +        +   
Sbjct: 352 QQALAQRPDAFDYAWLADVYDRLRRPEEAAK 382


>gi|158522429|ref|YP_001530299.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511255|gb|ABW68222.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 827

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 66/390 (16%), Positives = 122/390 (31%), Gaps = 36/390 (9%)

Query: 27  DVSITWGNRLYRTSPFVILSILYF-------------FLFAWILLFAVSRF----FLSCP 69
            +++ + +R Y  S FV+ ++++              FL A  ++F    F      +  
Sbjct: 350 GLALVFEHRTYLPSVFVVAALVWAAITYIRHRPLVIGFLCAVTMIFGCWTFQRNTIWADD 409

Query: 70  AMLFHMLHKR--NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             L+  + ++  N  + +  L  GL          A  M++   +    +      L   
Sbjct: 410 TALWRDVTEKSPNLARPWNNL--GLALKNQGQTDQAMAMYNRAIEIDPGYIHPYNNL--- 464

Query: 128 QIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                E  Q   A   LE  ++       A  +L     R+GD  +A  +  K L ISP+
Sbjct: 465 GALFLETGQPEKARPLLEKAIETDPLFMMAYSNLAIACHRLGDSEAAMAWCEKGLQISPN 524

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              +   +    +  +    A        +     +    + L   + +  D+    A  
Sbjct: 525 DLEIQNTLGVILLAQRREQEAAVLFEAVLQ-KDPGHTEALMNLALIADKQGDREKTAALL 583

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301
             AI   +L   S  A     + L        A   LE+   + P     H  + N++  
Sbjct: 584 EKAI---RLDPASAEARYHLGELLARTGNPDNAMAQLEQALHLKPDHALAHNAMGNLW-- 638

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           L +  T   +    +   I+     +   ++   +  G ID A           P     
Sbjct: 639 LQAGKTDRAIDHYQKAIAIDPGFAAAHTNLADALVRTGKIDSALHYLETVAASRPDDAGL 698

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           LL   I    + N        Q AL   P 
Sbjct: 699 LLKTGILHQQNGNLPAAENLYQKALSIDPG 728



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 54/196 (27%), Gaps = 6/196 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +     N   A  M       H   +  L +     + L   + + A +  +  + I 
Sbjct: 601 GELLARTGNPDNA--MAQLEQALHLKPDHALAHNAMGNLWLQAGKTDRAIDHYQKAIAID 658

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A  +L     R G ++SA  Y        PD   +       +        A   
Sbjct: 659 PGFAAAHTNLADALVRTGKIDSALHYLETVAASRPDDAGLLLKTGILHQQNGNLPAAENL 718

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +               L    + +A  G +  +     E   L  ++ +     A   
Sbjct: 719 YQKALSIDP----GCTACLNRLGMIHAQAGRLDKAAGCFEELALLVPDNPVIHYNLACLY 774

Query: 271 ISQNKKRKAEVILEKI 286
             QN+   A   L+K 
Sbjct: 775 ARQNEVEPALTNLKKA 790


>gi|59800805|ref|YP_207517.1| hypothetical protein NGO0361 [Neisseria gonorrhoeae FA 1090]
 gi|194098095|ref|YP_002001143.1| HemY protein [Neisseria gonorrhoeae NCCP11945]
 gi|240013677|ref|ZP_04720590.1| HemY protein [Neisseria gonorrhoeae DGI18]
 gi|240016116|ref|ZP_04722656.1| HemY protein [Neisseria gonorrhoeae FA6140]
 gi|240117496|ref|ZP_04731558.1| HemY protein [Neisseria gonorrhoeae PID1]
 gi|240120746|ref|ZP_04733708.1| HemY protein [Neisseria gonorrhoeae PID24-1]
 gi|268603196|ref|ZP_06137363.1| HemY protein [Neisseria gonorrhoeae PID1]
 gi|59717700|gb|AAW89105.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|193933385|gb|ACF29209.1| HemY protein [Neisseria gonorrhoeae NCCP11945]
 gi|268587327|gb|EEZ52003.1| HemY protein [Neisseria gonorrhoeae PID1]
          Length = 405

 Score = 71.5 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPENMRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E A S   +   
Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387


>gi|301155142|emb|CBW14606.1| predicted protoheme IX synthesis protein [Haemophilus
           parainfluenzae T3T1]
          Length = 428

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 11/169 (6%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R++ +  +  L        +S     V +   N +Y  S   ++ +    L     L 
Sbjct: 1   MFRVL-FLMIALLAGLIAGPYLSGQQGYVRVETANTVYEMSLTTLVILFVVTLAVIYSLE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +   F    +  ++   +R   K  +    GLM +   +   A K+    ++      E
Sbjct: 60  WLVTRFFRLSSNTYNWFSRRKRVKAQRQTLEGLMKMNEGDYAKAEKLIGKNAKHSA---E 116

Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            ++ L++  + A        A+  L     I AT      +L  E  R 
Sbjct: 117 PVLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLVVEIART 160


>gi|90416179|ref|ZP_01224111.1| hemY protein [marine gamma proteobacterium HTCC2207]
 gi|90331904|gb|EAS47118.1| hemY protein [marine gamma proteobacterium HTCC2207]
          Length = 405

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 132/399 (33%), Gaps = 29/399 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M +L+    +  LV    + V       V +++       S +     L  +L A +LLF
Sbjct: 1   MRKLLLLLVLALLVGALAVWVLQFGSGYVLLSFAELTIEMSAWT---GLIIYLAATVLLF 57

Query: 60  AV---SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI--PLARKMHSYVSQQH 114
            +    R+ +S           R   +       GL+ + A +     A+ +     +  
Sbjct: 58  WLLLTWRWIVSA-GGFRSWWRNRRSARNQNQTAEGLL-LFAGDDWQEAAKLLSQSADKSS 115

Query: 115 TFHNEYLVYLL-EVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNS 172
                 +V LL   + A    Q++ A + L+ + +  P +R  A  +L            
Sbjct: 116 M----PVVNLLFAARAAADNEQFDQARQILQRLKVSYPKSRFVADKALAETHLLQERPEE 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +        +P    +   +   + L++ W+ A   L    K  +  N      L   
Sbjct: 172 ALKILQAVYAENPRDKGLLRLLADAHYLSENWTAAQKMLG-DLKRFQAVNDQDLANLEQD 230

Query: 233 SLENADKGDMIASYHDAIESLKLCDN---SIM--------ASICAAKSLISQNKKRKAEV 281
              N      + S     E     ++    I            C A SL       K +V
Sbjct: 231 VYCNLLDSSGLNSRGTISEKRVQLEDIWYLIPRKHQREPQIIACYAASLGRVKLTDKQQV 290

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +L K      HP++   +  L SE+   +L  A +    + E  + L+ + +I   +   
Sbjct: 291 LLTKSLNRQWHPQLVTQFGELESESPEKQLMVAEKWLVQHGEDADLLLALGRICQRLKFW 350

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            +A      A+K+ P  +  + LA + +    +      
Sbjct: 351 GKAKDYFTTAVKLRPSVQGSIYLASVLEKIGDSNASAEA 389


>gi|260914566|ref|ZP_05921034.1| porphoryin biosynthesis protein HemY [Pasteurella dagmatis ATCC
           43325]
 gi|260631357|gb|EEX49540.1| porphoryin biosynthesis protein HemY [Pasteurella dagmatis ATCC
           43325]
          Length = 422

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 14/180 (7%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R++ +  ++ L        ++     V I         S   ++      +     + 
Sbjct: 1   MFRVL-FLMLVLLAGLIAGPYLAGKQGYVLIETSKYSIEMSITTLVIFFVVIMAVIYGIE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V   F       +    +R  +K  K    GLM +   +   A K+    ++       
Sbjct: 60  WVVTRFCRLSNNTYTWFSRRKREKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKHA--EEP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGD 169
            L ++   + A        A+  L           +M+++  TR          +    D
Sbjct: 118 ILNFIKAAEAAQQRGDDFNANRYLIQATELAGSDNLMVELARTRILLQQGKLPAARSSVD 177


>gi|157803661|ref|YP_001492210.1| hypothetical protein A1E_02400 [Rickettsia canadensis str. McKiel]
 gi|157784924|gb|ABV73425.1| hypothetical protein A1E_02400 [Rickettsia canadensis str. McKiel]
          Length = 337

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 124/349 (35%), Gaps = 25/349 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L    F ++  +   V I+  +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLFYFGFTLIESFDSKVFISLYDYNIETTLFFNLILGLVLLISCFIVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116
                +  P+ + ++ HKR  +    AL   +++ A    ++    A    + +S +   
Sbjct: 61  FLILIIELPSKIHNIFHKRKVNHDRYAL---ILAFAEYIMSNKAKSASIARTNLSSEDLK 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    L+           +      + +++      +   +L            AQ Y
Sbjct: 118 DSQEFHNLILAVTEE---DIDTKISYFQKLMKSKEFAFYGSKNLAKLYYDKSLYEEAQNY 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAIL--LIA 231
           A KA +++         ++  Y     W++  TF+  K     +++      AI+   + 
Sbjct: 175 AIKAYNLNELDSDNLITLMHCYGKLSLWTK-FTFITNKLTKFHKYDSIKQMHAIVEYYLL 233

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWK 288
            + +  +  ++  +      ++ L  N     +   +   + N K    K   IL+  ++
Sbjct: 234 AAKQEVESNNIAHAIDYLETAIDL--NFYNGELL--EFYFTLNNKLNVNKKTKILKDAFR 289

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           + P  ++  ++    S +     K   +  +  K+  E L++  +  LE
Sbjct: 290 IVPSLKLVQLFKKFTSLSDRQIYKELTQELDAKKD--EILILAIEAYLE 336


>gi|197334236|ref|YP_002154832.1| HemY protein [Vibrio fischeri MJ11]
 gi|197315726|gb|ACH65173.1| HemY protein [Vibrio fischeri MJ11]
          Length = 394

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 116/405 (28%), Gaps = 52/405 (12%)

Query: 1   MLRLIRY-FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+RL+     ++  +I      +     V I+  N     S   ++  +   +    LL 
Sbjct: 1   MIRLLLLAIVLVGGLIVGTT-FADQQGYVLISVANTTIEMSLTTLVLFIGALIAGLFLLE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            + +  LS           R+  K     + G++ +       A ++ +   + + F   
Sbjct: 60  MIVKRILSVSNYTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAERLITKGGRHNDF--- 116

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+  L    A   RQ     +K   +   Q  +T   A+ S      R      A    
Sbjct: 117 PLLNYLAAAEAAQGRQQIDLRDKYLQLASEQDDSTLAVALTS-AKLQMRQKQYELALATL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS---- 233
                  P  P + E + + Y+   EW +A+  +      A      +A+ L  ++    
Sbjct: 176 QFVKVDYPRNPVLLELLKECYLALNEW-QALKNIIHPLSKANLITDQQALELEEKAECGL 234

Query: 234 -LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
               A                K     I   IC    LI Q + RKA+            
Sbjct: 235 MAVIATNKGTAGLLEHWDALPKKLKKHIPILIC----LIQQLQIRKADS----------- 279

Query: 293 PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVI----------------VSK 333
                 Y  L          +L   L    +      ++++                +++
Sbjct: 280 ----EAYIILRDNLKKRADDRLVALLPTLNLADYHPVTVLLESMADYDVRNPVIQSTLAQ 335

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           + +       A      A+ I      +  LA++    +      
Sbjct: 336 LYMRTQKWQPAREHFEAALAIREDMSDYAYLARVLDKQNRKQAAA 380


>gi|192359509|ref|YP_001983837.1| hemY protein [Cellvibrio japonicus Ueda107]
 gi|190685674|gb|ACE83352.1| hemY protein [Cellvibrio japonicus Ueda107]
          Length = 402

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/379 (13%), Positives = 127/379 (33%), Gaps = 17/379 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61
            RL+   F + ++     +++     + I +G +    + ++   +         L+  +
Sbjct: 3   RRLLGIVFFVLIIAALIFLLAQGDGYLLIAFGTKTIEMTLWMAAMLGVLLYGVIWLIRQL 62

Query: 62  SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
            +  +        +    + ++  K   +G++     +   ARK      ++  F     
Sbjct: 63  IQGSIHVTRRFREIFLFGSVERAQKRAASGMVDYLTGDWVEARKKLVRTFEKIEFPLP-- 120

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL   + +        A   LE+  Q P +    V +      + G    A        
Sbjct: 121 NYLAAARSSFEMGDEEEAERLLELARQHPNSELPVVLTRARLQIQAGRYEQALAIIKPIE 180

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              P  P V + + Q Y+    W          +K           L    ++E    GD
Sbjct: 181 LEQPRLPAVLDLLHQIYLAQNNWRALQEMFPAMRKAKVLSAPELQELETRLAVEQL--GD 238

Query: 242 MIASYHDAIESLKL------------CDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288
              +    + + +L                    + A +++L+     ++AE ++ K+  
Sbjct: 239 AGKAAQQKLIAERLPFLQQQWKDLARAQQKTPEVVLAYSQALVDNYHDQEAESLVRKMLN 298

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
              +P + N+Y  L  +    +L+ A    + + +    L+ + ++ + +   D A    
Sbjct: 299 SEWYPPLVNLYGRLQLKEIRAQLRMAEGWLKQHGDDPHLLLTLGRLMVRLEQWDAARDYF 358

Query: 349 MLAMKIAPRKEIFLLLAQI 367
             + K++ + E  + LA +
Sbjct: 359 QRSFKLSAKVETAMELAAL 377


>gi|126666608|ref|ZP_01737586.1| uncharacterized enzyme of heme biosynthesis [Marinobacter sp.
           ELB17]
 gi|126628996|gb|EAZ99615.1| uncharacterized enzyme of heme biosynthesis [Marinobacter sp.
           ELB17]
          Length = 413

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 142/371 (38%), Gaps = 23/371 (6%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             + +++GN L  T+ +V L++L   +   ++L  + R   +  +M+   + +    +  
Sbjct: 27  GYIRVSFGNYLVETNFWVGLALLVALVVLTVMLIGLVRRLRNGTSMMSGWIARGKERRAR 86

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLE 144
           +    GL+++A  N P A+KM +  +      +  L+  L   Q +     +    E L 
Sbjct: 87  RRTTQGLLALAEGNWPRAKKMLTSSASNA---DTPLINYLAAAQASFECGDHEAVDELLR 143

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT--KALDISPDAPWVTEAVVQQYVLAK 202
              +     + AV  +     ++      Q  AT  +    SP  P+V + +   Y+  +
Sbjct: 144 KAFESTPGSDLAV-GITQVQLQLAGNRVEQALATLLRLRKQSPHHPFVLKLLKTAYLRLE 202

Query: 203 EWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +W      L + +K          +  R     L+ ++     K               L
Sbjct: 203 DWRELSKLLPKLRKYNILVSAELDDLERQTWHNLLEKAASKCRKEQASNPASSLDSLTGL 262

Query: 256 CDNSIMASICA--------AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
            D    +S+             L     + +AE++L K+ + +   E+ N+Y  + S+  
Sbjct: 263 WDQL-PSSMRRDERTIFNYTSLLAGLGDEAQAEILLRKVLRNHWSDELINLYGRVESQAP 321

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
             +L  A +  +    + E L+ + +++L      +A      ++K+  ++E    L+++
Sbjct: 322 DEQLLLAEQWLKNRPNNAELLLALGRLSLRNELWGKAREYFETSLKLQRKRETLAELSRL 381

Query: 368 EQANSHNTDKI 378
                H+T  I
Sbjct: 382 NAHMGHDTASI 392


>gi|149376993|ref|ZP_01894747.1| uncharacterized enzyme of heme biosynthesis [Marinobacter algicola
           DG893]
 gi|149358770|gb|EDM47240.1| uncharacterized enzyme of heme biosynthesis [Marinobacter algicola
           DG893]
          Length = 412

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 134/373 (35%), Gaps = 49/373 (13%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             + I+ GN L  T+ ++ L++L   +   +L   + R       M+   L + N  +  
Sbjct: 27  GYIRISLGNYLIETNFWIGLALLVLLVVVSVLTINLFRRLRHGTGMVAGWLARSNERRAR 86

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIA----H 140
           +    GL+++A  N P ARK+ +  S +H   +  L+  L   Q +     +        
Sbjct: 87  RRTTQGLLALAEGNWPRARKLLT-SSAEHA--DTPLINYLAAAQASFESGDHEAVDELLR 143

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALD-------ISPDAPW 189
           +  E                      +G   +  + A     +AL         +P  P+
Sbjct: 144 KAFESTPGSD--------------MAVGITQAQLQLAGNRLEQALATLVRLRKQAPHHPF 189

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADK--G 240
           V + +   YV  ++W      L + +K          +  R     L+ R+ E   +  G
Sbjct: 190 VLKLLKNTYVRLEDWRELSRLLPEIRKRNLMESEEQGDLERLVWQNLLQRAAEECRRHSG 249

Query: 241 DMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           +  AS     +        +          A+ L     + +AE +L K+ + +   E+ 
Sbjct: 250 EPSASLEPLTKLWDELPGFLRRDEHTIREYARLLADLGDEAQAETLLRKVLRNHWGDELV 309

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           N+Y  +       +L  A +  +    + E L+ + +++L      +A      ++++  
Sbjct: 310 NLYGRVKGLKPDEQLLVAEQWLKDRPNNAELLLALGRLSLRNELWGKAREYFETSLRL-- 367

Query: 357 RKEIFLLLAQIEQ 369
            +     +A++ +
Sbjct: 368 -RRSRETMAELSR 379


>gi|330817974|ref|YP_004361679.1| HemY domain protein [Burkholderia gladioli BSR3]
 gi|327370367|gb|AEA61723.1| HemY domain protein [Burkholderia gladioli BSR3]
          Length = 398

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/398 (12%), Positives = 126/398 (31%), Gaps = 18/398 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPED-VSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V  +    V I +       S  + +  +         L  
Sbjct: 5   LRGILWLAVLFAIAVALATVGRFDGGQVLIVYPPYRVDVSLNLFIVSIVVLFVVIYALLR 64

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +  ++K + +L   + ++ A     A K            +  
Sbjct: 65  IVRNIWRMPQRVAAYRKRMRHEKAHASLRDAIANLYAGRFSRAEKAARDALSVDANQSAA 124

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            +        + E              +    R  A   +  E+    D   A     + 
Sbjct: 125 GLVGAVAAHRMHEYARRDEWLARVDANEWQEARLLATADMRAEAR---DAEGALAALAEM 181

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--- 237
                      +  ++     K W+  +  L +  +  +  +   A+ +  ++ E+    
Sbjct: 182 QASGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRMRQQAAEHLLRD 240

Query: 238 ---DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
              D   ++  +     + +        +  AA+ L++  ++ +A  I+E     N    
Sbjct: 241 RRHDADALLEVWQSLSAAERQSPRL---ADLAAELLVALERQPEARRIVEDALAHNWDAR 297

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +   Y      + +  +++A   +  + +  E LV + ++  +     +A +    A+K+
Sbjct: 298 LLRRYPDTAGSDALPLIQKAEGWKRDHPDDAELLVALGRLCQKQQLWGKAQSFLEAALKL 357

Query: 355 APRK----EIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           +  +         LA + +          ++ +SAL A
Sbjct: 358 SDSEALKVRAHRALASLFEHLGDQEKAARHYRESALAA 395


>gi|157368424|ref|YP_001476413.1| putative protoheme IX biogenesis protein [Serratia proteamaculans
           568]
 gi|157320188|gb|ABV39285.1| HemY protein [Serratia proteamaculans 568]
          Length = 398

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/364 (13%), Positives = 108/364 (29%), Gaps = 7/364 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +        +++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNIETSVTGLVIMGVLLFVVLLVIEWILRRIFRTGAHTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RSRARKQTKAALIKLAEGDYKQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDDFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   +   T +  V  +        G+ ++A+    + L+ +P  P V       Y+
Sbjct: 139 QYLERAAEAADTDQLPVDITRVRIQLAQGENHAARHGVDRLLNQAPRHPEVLRLAELAYL 198

Query: 200 LAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
               ++  +  L            E    +    I    +               +  + 
Sbjct: 199 RTGAFASLLEILPSMSKINLHTDAELQALQQQAYIGLMNQAMADEGSEGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             + +   I     LI  N    A+ I+    K      +  +   L S N     K   
Sbjct: 259 TRHEVPLQIAMVDHLIECNDHELAQEIVLDSLKRQYDERLVLLIPRLKSGNPQQLEKALR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ ++ G   QA      A+K  P    +  LA +      + 
Sbjct: 319 QQVKQHGATPLLNSTLGQLLMKHGEWQQAADAFREALKQRPDAYDYAWLADVLDKLHRSD 378

Query: 376 DKIL 379
           +   
Sbjct: 379 EAAQ 382


>gi|149375196|ref|ZP_01892968.1| TPR repeat protein [Marinobacter algicola DG893]
 gi|149360560|gb|EDM49012.1| TPR repeat protein [Marinobacter algicola DG893]
          Length = 898

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 102/311 (32%), Gaps = 38/311 (12%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E    LLE QI LA  + + A        +I +    +V  L   +   GD++ A+   +
Sbjct: 145 ETQAALLEGQIYLAANELDKARTAFNRAREIDSGDVESVIGLSKTAFAGGDVSKARTLVS 204

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLE 235
           +A  I  ++  +     +     +EW +A     +  ++  +++     +   + +    
Sbjct: 205 EAEGIDGESGELWLWKAELAASQEEWQKAEDAYIKALEDIGQYDVMTQRKYATISSLIRV 264

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE- 294
              +G    ++       K    +I +++ AA++ + Q    +A   LE++    P+ E 
Sbjct: 265 LRAQGKQSEAFVYEEILAKSAPGTIKSNLMAAQAAVEQGDLDEAARYLEEVLTQAPNHEQ 324

Query: 295 --------------------IANIYTHLLSENTVGKLKRALRLEEINKE----------- 323
                               +        +  T  KL  A RL+  N E           
Sbjct: 325 TSLMLGLVRFRQGRVEDAEKLLAPIAEAGNSETASKLLAAARLQMRNPEGAQAILSNLED 384

Query: 324 ---SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
                E+L +V+   L  G +         A+   P      L            D+ + 
Sbjct: 385 KDSDPETLAMVAIATLASGDLKTGETLMDKALASNPDNHQLRLRYATYLNQRGEHDRAIA 444

Query: 381 WTQSALHAMPD 391
                L + P+
Sbjct: 445 EATRVLESAPE 455



 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 15/257 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              AR +      +  F +   + L   Q A  E + + A   ++   Q          +
Sbjct: 646 GETARAVALLDRARALFPDNQDIALQAAQQAFNEGKEDEARRIIQETKQQHPESAAPYVT 705

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
                 R  +   A      AL+  P A             + +   A++FL   +K   
Sbjct: 706 EAAYFERQQEYQQAAELYQLALNKRPSAELANGYATNLQ-RSGKTQEALSFLETARKTYP 764

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             N+       + +L    +G   ++  +    L+    +++     A        KR A
Sbjct: 765 GSNQLLL----SLALLQQSEGQQESAKSNYETLLETSPGNVVVLNNLAWIYHEGGDKR-A 819

Query: 280 EVILEKIWKVNP-HPEIANIYTHLL-----SENTVGKLKRALRLEEINKESVESLVIVSK 333
             + ++ ++++P +  +A+ Y  ++      E +V  L++A  L     ES E  + +++
Sbjct: 820 IGLAKQAYELSPDNAAVADTYGWIMLKAGNHEASVPILEKAHEL---QPESEEIALHLAE 876

Query: 334 IALEMGSIDQAHAKAML 350
               +G    A      
Sbjct: 877 AYRSVGKNSAARKVLEK 893



 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 60/191 (31%), Gaps = 3/191 (1%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
             +          +   ++AL +     A ++    +++      A+  L     R    
Sbjct: 516 KAREKAPESPAPLISLGRLALTQDDQAEAQKQFRAAVRLAPDSRQALQGLATVLGREETT 575

Query: 171 NSAQR-YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              +           P    +  A++       +   A     +++          A + 
Sbjct: 576 GFMREILKENPEATGPRLILLEAALMDNKRQEADDLTASLLERKEQTTPSPATPFVAGIY 635

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            + +    + G+   +      +  L  ++   ++ AA+   ++ K+ +A  I+++    
Sbjct: 636 SSTASAFQNSGETARAVALLDRARALFPDNQDIALQAAQQAFNEGKEDEARRIIQET--K 693

Query: 290 NPHPEIANIYT 300
             HPE A  Y 
Sbjct: 694 QQHPESAAPYV 704



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 19/252 (7%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYAT 178
            L+ +L  Q      + + A    E++ +  P T +  + +    +   GDL+ A RY  
Sbjct: 260 SLIRVLRAQ-----GKQSEAFVYEEILAKSAPGTIKSNLMA-AQAAVEQGDLDEAARYLE 313

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           + L  +P+    +  +            A   L      A+  N   A  L+A +     
Sbjct: 314 EVLTQAPNHEQTSLMLGLVRFRQGRVEDAEKLL---APIAEAGNSETASKLLAAARLQMR 370

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--H--PE 294
             +   +    +E       ++      A + ++    +  E +++K    NP  H    
Sbjct: 371 NPEGAQAILSNLEDKDSDPETL---AMVAIATLASGDLKTGETLMDKALASNPDNHQLRL 427

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               Y +   E+     +    LE    E  ++  ++ +     G++D A   A   ++ 
Sbjct: 428 RYATYLNQRGEHDRAIAEATRVLES-APELEQARSVIVEAQARSGNMDAAVKTASQWIEE 486

Query: 355 APRKEIFLLLAQ 366
            P   I  L+ +
Sbjct: 487 VPD-SINALMTR 497



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/242 (11%), Positives = 77/242 (31%), Gaps = 55/242 (22%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
            +  + +  +L +++  A+  L+      +      A+L            ++  +    
Sbjct: 113 ASLILAEANLLQEDFDDALAALDDITSPDRPVETQAALL---EGQIYLAANELDKARTAF 169

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------------WKVNPHPEIA- 296
             + ++    + + I  +K+  +     KA  ++ +             WK     E+A 
Sbjct: 170 NRAREIDSGDVESVIGLSKTAFAGGDVSKARTLVSEAEGIDGESGELWLWKA----ELAA 225

Query: 297 ---------NIYTHLLSE---------------NTVGKLKRA-----------LRLEEIN 321
                    + Y   L +               +++ ++ RA             L +  
Sbjct: 226 SQEEWQKAEDAYIKALEDIGQYDVMTQRKYATISSLIRVLRAQGKQSEAFVYEEILAKSA 285

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
             +++S ++ ++ A+E G +D+A       +  AP  E   L+  + +      +     
Sbjct: 286 PGTIKSNLMAAQAAVEQGDLDEAARYLEEVLTQAPNHEQTSLMLGLVRFRQGRVEDAEKL 345

Query: 382 TQ 383
             
Sbjct: 346 LA 347



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 8/121 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-- 222
            R G+L ++   A  A+++ P+       +V   + A + + A   LNQ  +        
Sbjct: 47  QRQGELKASTLEARSAIELQPEKIEPYFLIVNNLLKAGDAANAERHLNQILERLPAEQID 106

Query: 223 ---RNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              RNRA L++A + L   D  D +A+  D     +       A++   +  ++ N+  K
Sbjct: 107 AKVRNRASLILAEANLLQEDFDDALAALDDITSPDR--PVETQAALLEGQIYLAANELDK 164

Query: 279 A 279
           A
Sbjct: 165 A 165


>gi|300114393|ref|YP_003760968.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
           C-113]
 gi|299540330|gb|ADJ28647.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
           C-113]
          Length = 931

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 89/277 (32%), Gaps = 20/277 (7%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------IPATREFAVYSLYFES 164
                        LL +   L  R ++ A E  + M +       P T     Y      
Sbjct: 433 KALKLEPQMPQADLLVILSHLQARNFDKAIEAAQQMHRKYPDSPEPLTLMGGAY------ 486

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+   A+    +AL ++P AP     +    +      +AI+   Q  K    +N N
Sbjct: 487 LGKGEKAKARSAFREALKVAPGAPNAIHNLANLEIQKGNLEKAISLYQQTLK----YNPN 542

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-- 282
               L+  +     +G++  +     ++++    ++   +      +   + +KA  I  
Sbjct: 543 HLHTLLRLAALEQQRGNIAKAKILLEQAMQAHPQALNPRLLLGDYYLRDGQPQKALAITS 602

Query: 283 -LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            ++  +  NP          L    +   L+   +L  +  +S  +   +++   E    
Sbjct: 603 DIQDTFPDNPALLALAGKIQLALGKSRNALRYFNKLVSLQPDSATAHYELARAYYETKQF 662

Query: 342 DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
            +   +    + + P       ++A++        + 
Sbjct: 663 TKTQTELEKTLVLDPNHAGARFVMARLLMQEGKQEEA 699



 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 85/262 (32%), Gaps = 19/262 (7%)

Query: 100 IPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           I  A++MH     +    +   L   L     L + +   A       L++      A++
Sbjct: 462 IEAAQQMH-----RKYPDSPEPLT--LMGGAYLGKGEKAKARSAFREALKVAPGAPNAIH 514

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L     + G+L  A     + L  +P+       +          ++A   L Q  +  
Sbjct: 515 NLANLEIQKGNLEKAISLYQQTLKYNPNHLHTLLRLAALEQQRGNIAKAKILLEQAMQAH 574

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +    R +L           G    +     +      ++      A K  ++  K R 
Sbjct: 575 PQALNPRLLLGDYY----LRDGQPQKALAITSDIQDTFPDNPALLALAGKIQLALGKSRN 630

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A     K+  + P     H E+A  Y     + T  + +    L  ++     +  ++++
Sbjct: 631 ALRYFNKLVSLQPDSATAHYELARAYYE-TKQFTKTQTELEKTLV-LDPNHAGARFVMAR 688

Query: 334 IALEMGSIDQAHAKAMLAMKIA 355
           + ++ G  ++A  +     +  
Sbjct: 689 LLMQEGKQEEAKKQLRELKRTH 710



 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 95/262 (36%), Gaps = 10/262 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +    + +      Q TF +   +  L  +I LA  +   A      ++ +      A Y
Sbjct: 591 DGQPQKALAITSDIQDTFPDNPALLALAGKIQLALGKSRNALRYFNKLVSLQPDSATAHY 650

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L             Q    K L + P+       + +  +   +   A     ++ +  
Sbjct: 651 ELARAYYETKQFTKTQTELEKTLVLDPNHAGARFVMARLLMQEGKQEEA----KKQLREL 706

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           K  + N+  ++   +     +     +     ++     +S    +  A+      K++ 
Sbjct: 707 KRTHLNQPEVIDLEAQLALQQNQPSEAIEIYQKAHNDFPDSNRWPLKLAQIQWQTGKQKD 766

Query: 279 AEVILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVSKIA- 335
           +   LEK W  + HP +    +    +   +G+  RA     ++++++ E++++++ +A 
Sbjct: 767 SLATLEK-WLKS-HPEDFQVQFVAANNYLLLGQNNRAESAFAKLHEQAPENVLVLNNLAW 824

Query: 336 -LEMGSIDQAHAKAMLAMKIAP 356
            +      QA   A  A+++AP
Sbjct: 825 LIHKKEPTQALGYAKQALELAP 846



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 88/317 (27%), Gaps = 45/317 (14%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK---LEMMLQIPA 151
           + A + P A K                  +   + AL +R++  A E       + +   
Sbjct: 78  VKAGDGPSAEKELKRALSLGLA--PEATAISLTRAALLQREFQTAVEASTDYPTLPKEEQ 135

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKEW- 204
               A+    +   +   L  A++    AL I+PD P          A+       ++W 
Sbjct: 136 AELLALRGHAYLGLQE--LEKAEKSYESALSINPDTPEAGFGKARIAALQDHLEETRQWL 193

Query: 205 SRAITF-------------LNQKKKNAKEWNRNR----------AILLIARSLENADKGD 241
            + +               L++ + N +   +            A  L+ R+L      D
Sbjct: 194 EKVLQTTPSFAPAWSLLGDLDRYQGNGEAAEQAYGKAIAHRFNNASDLLNRALVRIYLKD 253

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +  D     K   N    +         Q +   A    +K    NP    A  Y  
Sbjct: 254 YEGAASDLETLSKRAPNHPGVTYAQGLLYFQQQQYADALTDFQKTLNQNPKYMPAVFYAG 313

Query: 302 LLSE-----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +            +L    +      +S  +  +++ +    G    A +     +   P
Sbjct: 314 IAHYQQGQMEQAERL--LQQFLAYFPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYP 371

Query: 357 -RKEIFLLLAQIEQANS 372
               I  L+  I     
Sbjct: 372 NDTHILTLMGDIALRQG 388



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 7/194 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G +  A+R   + L   P +    + +        ++  A + L            N 
Sbjct: 318 QQGQMEQAERLLQQFLAYFPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYP----ND 373

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             +L         +G          +       S  A +     L    + ++   +LEK
Sbjct: 374 THILTLMGDIALRQGKAREGTGYFQQVTIQEPESAAAYMKLGLGLEFSGEHQQGIQMLEK 433

Query: 286 IWKVNPH-P--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             K+ P  P  ++  I +HL + N    ++ A ++     +S E L ++    L  G   
Sbjct: 434 ALKLEPQMPQADLLVILSHLQARNFDKAIEAAQQMHRKYPDSPEPLTLMGGAYLGKGEKA 493

Query: 343 QAHAKAMLAMKIAP 356
           +A +    A+K+AP
Sbjct: 494 KARSAFREALKVAP 507



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 3/113 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           V  +     L   Q N A      + +        + +L +   +  +   A  YA +AL
Sbjct: 784 VQFVAANNYLLLGQNNRAESAFAKLHEQAPENVLVLNNLAWLIHK-KEPTQALGYAKQAL 842

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           +++P+ P V + +    +   +  +A+     KK + K          +A++L
Sbjct: 843 ELAPENPEVMDTLGVILLKKGQIRKALGLF--KKASRKLPQNQDIQFHLAQAL 893



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 41/202 (20%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL  +PD       + Q YV A +   A   L +            AI L   +L   + 
Sbjct: 59  ALQKTPDNQEARWLLGQAYVKAGDGPSAEKELKRALSLGLAPE-ATAISLTRAALLQRE- 116

Query: 240 GDMIASYHDAIESLKLCDNSIM---ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                 +  A+E+            A + A +                            
Sbjct: 117 ------FQTAVEASTDYPTLPKEEQAELLALR---------------------------G 143

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + Y  L         K       IN ++ E+    ++IA     +++        ++  P
Sbjct: 144 HAYLGLQELEKAE--KSYESALSINPDTPEAGFGKARIAALQDHLEETRQWLEKVLQTTP 201

Query: 357 R-KEIFLLLAQIEQANSHNTDK 377
                + LL  +++   +    
Sbjct: 202 SFAPAWSLLGDLDRYQGNGEAA 223


>gi|59710670|ref|YP_203446.1| protoheme IX synthesis protein [Vibrio fischeri ES114]
 gi|59478771|gb|AAW84558.1| predicted protoheme IX synthesis protein [Vibrio fischeri ES114]
          Length = 394

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 116/405 (28%), Gaps = 52/405 (12%)

Query: 1   MLRLIRY-FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+RL+     ++  +I      +     V I+  N     S   ++  +   +    LL 
Sbjct: 1   MIRLLLLAIVLVGGLIVGTT-FADQQGYVLISVANTTIEMSLTTLVLFIGALIAGLFLLE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            + +  LS           R+  K     + G++ +       A ++ +   + + F   
Sbjct: 60  MIVKRILSVSNYTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAERLITKGGRHNDF--- 116

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+  L    A   RQ     +K   +   Q  +T   A+ S      R      A    
Sbjct: 117 PLLNYLAAAEAAQGRQQIDLRDKYLQLASEQDDSTLAVALTS-AKLQMRQKQYELALATL 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS---- 233
                  P  P + E + + Y+   EW +A+  +      A      +A+ L  ++    
Sbjct: 176 QFVKVDYPRNPVLLELLKECYLALNEW-QALKNIIHPLSKANLITDQQALELEEKAECGL 234

Query: 234 -LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
               A                K     +   IC    LI Q + RKA+            
Sbjct: 235 MAVIATNKGTAGLLEHWDALPKKLKKHVPILIC----LIQQLQARKADS----------- 279

Query: 293 PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVI----------------VSK 333
                 Y  L          +L   L    +      ++++                +++
Sbjct: 280 ----EAYIILRDNLKKRADDRLVALLPTLNLADYHPVTVLLESMADYDVRNPVIQSTLAQ 335

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           + +       A      A+ I      +  LA++    +      
Sbjct: 336 LYMRTQKWQPAREHFEAALAIREDMSDYAYLARVLDKQNRKQAAA 380


>gi|240112470|ref|ZP_04726960.1| HemY protein [Neisseria gonorrhoeae MS11]
 gi|240115210|ref|ZP_04729272.1| HemY protein [Neisseria gonorrhoeae PID18]
 gi|240125303|ref|ZP_04738189.1| HemY protein [Neisseria gonorrhoeae SK-92-679]
 gi|254493273|ref|ZP_05106444.1| HemY protein [Neisseria gonorrhoeae 1291]
 gi|268598538|ref|ZP_06132705.1| HemY protein [Neisseria gonorrhoeae MS11]
 gi|268600890|ref|ZP_06135057.1| HemY protein [Neisseria gonorrhoeae PID18]
 gi|268683904|ref|ZP_06150766.1| HemY protein [Neisseria gonorrhoeae SK-92-679]
 gi|226512313|gb|EEH61658.1| HemY protein [Neisseria gonorrhoeae 1291]
 gi|268582669|gb|EEZ47345.1| HemY protein [Neisseria gonorrhoeae MS11]
 gi|268585021|gb|EEZ49697.1| HemY protein [Neisseria gonorrhoeae PID18]
 gi|268624188|gb|EEZ56588.1| HemY protein [Neisseria gonorrhoeae SK-92-679]
          Length = 405

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV +  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVFVVVGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPENMRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E A S   +   
Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387


>gi|304309755|ref|YP_003809353.1| porphyrin biosynthesis protein [gamma proteobacterium HdN1]
 gi|301795488|emb|CBL43686.1| porphyrin biosynthesis protein [gamma proteobacterium HdN1]
          Length = 416

 Score = 70.7 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 61/401 (15%), Positives = 129/401 (32%), Gaps = 54/401 (13%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           LI +   + LV      ++  P  V +++      TS  V    +   +   I+ + +  
Sbjct: 9   LIFFAVAVVLVSMFCAKLARNPGYVLLSYRYYTLETSMLVGFLSIVLLVVLSIVGYRL-- 66

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
                 +     +  R   +       GL++ A  N P A K+ S  +     ++  L+ 
Sbjct: 67  TVWLFDSNWRRRMANRKTMR-------GLIAYAEGNWPQAEKLLSRSAGN---NDAPLIN 116

Query: 124 LL-EVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQRYA 177
            L   + A  + +     +    +LQ   T     +   +    F+        SA    
Sbjct: 117 FLAAAEAAHQQGKTEKRDDY---LLQAHETIPGVEQSVGLAKARFQILSE-QWESALA-T 171

Query: 178 TKALDISPDAPWVTEAVVQQYVLA----KEWSRAITFL----NQKKKNAKEWNRNRAILL 229
            + L  +P +P     V++          +W      L     Q+   A E++      L
Sbjct: 172 LRMLKQNPKSP-GYPFVLKLLAQTYNELADWPALRDLLPELQKQQVLEAAEFDVLTQRCL 230

Query: 230 IARSLENADKGDMIASY-------HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +            +            + ++   + I   +  A+ L      ++AE +
Sbjct: 231 EGQLAAAVRGTTEEGARLNLRGVWDTVPKKMRYNADLI---LGYAQRLAEAGASKEAEEV 287

Query: 283 ----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
               L K W       +  +Y  + S +   +L+ A    + +      L+ + +++L  
Sbjct: 288 VASFLRKNWDER----LVRLYGTIQSPDPAKQLQHAEGWAKEHPMDAALLLALGRLSLLN 343

Query: 339 GSIDQAHAKAMLAMKIAPRKEIF----LLLAQIEQANSHNT 375
              +QAH     ++      E       LLA + Q +  N 
Sbjct: 344 QQWEQAHRYFESSLNARKSAEACGELGRLLASLGQHDRSNE 384


>gi|319638046|ref|ZP_07992810.1| HemY protein [Neisseria mucosa C102]
 gi|317400691|gb|EFV81348.1| HemY protein [Neisseria mucosa C102]
          Length = 407

 Score = 70.7 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 126/383 (32%), Gaps = 26/383 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  +V +     + R +    +  L   +F    L  
Sbjct: 1   MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58

Query: 61  VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116
             +F       PA +      R   +   +L +  ++        A +  + V Q     
Sbjct: 59  -IKFVFGLLNLPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEAAKVLQNKEAG 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175
            N  L  +L    A     + +    L  +  +P  ++ + + L  E +    D  +A +
Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALGRRDYPTAAQ 177

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233
               A  I+ +   +    ++      + S  +    +  K     ++   +      R 
Sbjct: 178 NLEAAAKINGNLSRLVRLQLRYAFDHGDASDVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237

Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L  E  D G + A      ES+K   LC       +  A+         +A   ++  + 
Sbjct: 238 LLSEVTDAGRLKACLKQIPESVKSGELC-------VAIAEKYERLGLYTEAVKWVKTHYP 290

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344
            N  PE+   +   +   +    ++A+ L     +    +   L+ + ++A       +A
Sbjct: 291 QNRQPELLEAFVESVRFLSERDQQKAIDLADSWLQEQPNNALLLMYLGQLAYGRKLWGKA 350

Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367
                 ++ + P     L+LA++
Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373


>gi|294637948|ref|ZP_06716216.1| HemY protein [Edwardsiella tarda ATCC 23685]
 gi|291088909|gb|EFE21470.1| HemY protein [Edwardsiella tarda ATCC 23685]
          Length = 399

 Score = 70.7 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 117/391 (29%), Gaps = 21/391 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML+++  F ++   I    + + +   V I   N    TS   ++ +L   +     L  
Sbjct: 1   MLKVLLLFIILIAGIVLGPMFAGHQGYVLIQTDNYNIETSVTSLVIMLVLLMVVLFALEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  L   A        R   +  +    GL+ +   +     K+ +  +         
Sbjct: 61  LLRRLLRTGARTRGWFIGRKRSRARRQTREGLLKLTEGDYGQVEKLLARNADHA--DQPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--------PATREFAVYSLYFESCRIGDLNS 172
           + YLL  + A        A++ LE   ++          TR               + ++
Sbjct: 119 VNYLLAAEAAQQRGDELRANQYLERAAEVAGSDQLPVDITRV-------RLQLARKEYHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+      L+ +P  P V     Q Y+    +   +  L    K  +  +     L +  
Sbjct: 172 ARHGVDALLNYAPRHPQVLRLAEQAYLHTDAFEPLLEILPALAKAGEHSDEQIEKLQLRA 231

Query: 233 SLENADKGDM---IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288
            +   D+              ++         A   A A+ LI  +    A+ ++    K
Sbjct: 232 YIGLMDQAMANGGSEGLKQWWKAQGRKTRHETALQVALAEHLIECDDHLAAQQMVVDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +  +   L S       K   +    +  S      + ++ +  G    A    
Sbjct: 292 RRFDERLVRLMPRLKSSQPEQLEKLLQQQIRQHGASALLNSTLGQLLMRHGEWQAAADAL 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             A+K  P    +  LA + +      +   
Sbjct: 352 RAALKQRPDAYDYAWLADVLEKLHRPEEAAQ 382


>gi|198243522|ref|YP_002217868.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|197938038|gb|ACH75371.1| HemY protein [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
          Length = 399

 Score = 70.7 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RAIL     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAILEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|161505552|ref|YP_001572664.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866899|gb|ABX23522.1| hypothetical protein SARI_03717 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 399

 Score = 70.7 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  LAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|239998552|ref|ZP_04718476.1| HemY protein [Neisseria gonorrhoeae 35/02]
 gi|240080257|ref|ZP_04724800.1| HemY protein [Neisseria gonorrhoeae FA19]
 gi|240123050|ref|ZP_04736006.1| HemY protein [Neisseria gonorrhoeae PID332]
 gi|260440972|ref|ZP_05794788.1| HemY protein [Neisseria gonorrhoeae DGI2]
 gi|268594410|ref|ZP_06128577.1| HemY protein [Neisseria gonorrhoeae 35/02]
 gi|268596407|ref|ZP_06130574.1| HemY protein [Neisseria gonorrhoeae FA19]
 gi|268681677|ref|ZP_06148539.1| HemY protein [Neisseria gonorrhoeae PID332]
 gi|291044300|ref|ZP_06570009.1| HemY protein [Neisseria gonorrhoeae DGI2]
 gi|293399491|ref|ZP_06643644.1| HemY protein [Neisseria gonorrhoeae F62]
 gi|268547799|gb|EEZ43217.1| HemY protein [Neisseria gonorrhoeae 35/02]
 gi|268550195|gb|EEZ45214.1| HemY protein [Neisseria gonorrhoeae FA19]
 gi|268621961|gb|EEZ54361.1| HemY protein [Neisseria gonorrhoeae PID332]
 gi|291011194|gb|EFE03190.1| HemY protein [Neisseria gonorrhoeae DGI2]
 gi|291610060|gb|EFF39182.1| HemY protein [Neisseria gonorrhoeae F62]
 gi|317163827|gb|ADV07368.1| hypothetical protein NGTW08_0396 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 405

 Score = 70.7 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV I  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPEKMQRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E A S   +   
Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387


>gi|158521593|ref|YP_001529463.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158510419|gb|ABW67386.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 767

 Score = 70.7 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 82/244 (33%), Gaps = 13/244 (5%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L  +I   E ++  A +    +L +      A+  L     + GD   A+ +  +A+
Sbjct: 133 ALFLFAEICEKEGRFKQAEQLYGRVLSVQRDNTAALLRLGAIFAKTGDTVQARAHLEQAV 192

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P A      +   ++  K++S A     +    A   +     L I        +  
Sbjct: 193 AVDPSAIDPRLVLFNFHMSRKDYSAA----EKALAEAVAAHPENPDLHILLGNFYFSRKQ 248

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEI 295
              +    +++++   + + A + AA    +  +  KA  +      VNP      H  +
Sbjct: 249 PDQAEQAFLKAVETGGDHLPARLAAANFYRAVGRPDKALEMYRSALAVNPRSLRARH-AL 307

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A  Y      +     K    + + N   + + ++  ++ +     D+A +     +   
Sbjct: 308 AGFYLENNLLDAAA--KEVETILQANDTYLPARLLKIRLLIVRQEYDRAISLCDAYLTEN 365

Query: 356 PRKE 359
           P   
Sbjct: 366 PTSS 369



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 76/264 (28%), Gaps = 45/264 (17%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-- 191
             Y  A +     +    +   A   L     ++GD+  A     + L+I P        
Sbjct: 43  GDYRQAEQAYRQAIDTEPSLVSAWMGLAETRLKLGDVKEATDAYARLLEIDPGHVPARLN 102

Query: 192 -----------------------------EAVV---QQYVLAKEWSRAITFLNQKKKNAK 219
                                        +A+    +       + +A     +      
Sbjct: 103 MARFDLLSNRLEAAEQGVQQVLSVEPANIDALFLFAEICEKEGRFKQAEQLYGRVLS--- 159

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              R+    L+      A  GD + +     +++ +  ++I   +      +S+     A
Sbjct: 160 -VQRDNTAALLRLGAIFAKTGDTVQARAHLEQAVAVDPSAIDPRLVLFNFHMSRKDYSAA 218

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           E  L +    +P     H  + N Y      +     +  L+  E   + + + +  +  
Sbjct: 219 EKALAEAVAAHPENPDLHILLGNFYFSRKQPDQAE--QAFLKAVETGGDHLPARLAAANF 276

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRK 358
              +G  D+A      A+ + PR 
Sbjct: 277 YRAVGRPDKALEMYRSALAVNPRS 300



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 4/161 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L       A  + + A E     L +      A ++L         L++A +     L
Sbjct: 269 ARLAAANFYRAVGRPDKALEMYRSALAVNPRSLRARHALAGFYLENNLLDAAAKEVETIL 328

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
             +          ++  ++ +E+ RAI+  +         +     L  A+ L    K D
Sbjct: 329 QANDTYLPARLLKIRLLIVRQEYDRAISLCDAYLTENPTSSD----LYYAKGLAFWHKED 384

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           ++++      ++ L   +I A +  A   +   +  KA+ +
Sbjct: 385 LVSAEKAVSRAIALSPGNISARLRLADIYLKMGETEKAQAV 425


>gi|330501257|ref|YP_004378126.1| HemY domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328915543|gb|AEB56374.1| HemY domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 415

 Score = 70.7 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 127/383 (33%), Gaps = 24/383 (6%)

Query: 11  ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70
           + L + S  I +     V   +    Y++  +  L +L   +  + L+    R  LS   
Sbjct: 15  VGLYLLSLAIEADR-GYVLFAYKGFRYQSGLWAFLGLLVVVVMLYYLIKWTLRLLLSSTR 73

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
           +           +  +A   G++ +A      AR                + YL   + A
Sbjct: 74  LANPWSRLHRTRRVRQASEQGMLDLA--EGRWARAQRQLTRAAEADSQPLMYYLGAARAA 131

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPW 189
               +Y  +   LE  L      E A+   + E  R  GD ++A        +  P    
Sbjct: 132 NKLGEYEQSDALLERALNKQPQAELAIALTHAELQRSRGDSDAALETLQAMRERHPGHHL 191

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK---------EWNRNRAILL----IARSLEN 236
           V   + + Y+  ++WS  +  L + +K            E    R  L        +   
Sbjct: 192 VLRQLQRLYLQRQDWSALLGLLPELRKEKALPAAELDELERETWRGRLAEVGEYGLAQGE 251

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                +  +++    SL+     I       + L     + +AE +L    K +    +A
Sbjct: 252 TALQPLSKAWNQLSVSLRNEPELI---ATYVEQLRRLGAQEEAEEVLRSALKRSYDSRLA 308

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-- 354
             Y  L   +   +L+ A    + + +    L+ + ++ L+     +A      ++K+  
Sbjct: 309 RFYGVLRGADPARQLQTAELWLKQHPQDPALLLTLGRLCLQNQLWGKARDYFETSLKLER 368

Query: 355 --APRKEIFLLLAQIEQANSHNT 375
                 E+  LLAQ+ +    N 
Sbjct: 369 HPETCAELARLLAQLGELERSNQ 391


>gi|241759971|ref|ZP_04758069.1| HemY protein [Neisseria flavescens SK114]
 gi|241319425|gb|EER55855.1| HemY protein [Neisseria flavescens SK114]
          Length = 407

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 52/383 (13%), Positives = 126/383 (32%), Gaps = 26/383 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  +V +     + R +    +  L   +F    L  
Sbjct: 1   MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58

Query: 61  VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116
             +F       PA +      R   +   +L +  ++        A +  + V Q     
Sbjct: 59  -IKFVFGLLNIPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEATKVLQNKEAG 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175
            N  L  +L    A     + +    L  +  +P  ++ + + L  E +    D  +A +
Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALSRRDYPTAAQ 177

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233
               A  I+ +   +    ++      + +  +    +  K     ++   +      R 
Sbjct: 178 NLEAAAKINSNLSRLVRLQLRYAFDHGDAADVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237

Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L  E  D G + A      ES+K   LC       +  A+          A   ++  + 
Sbjct: 238 LLSEATDAGSLKACLKHIPESIKSGELC-------VAIAEKYERLGLYADAVKWVKTYYP 290

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344
               PE+   +   +   +  + ++A+ L     +   ++   L+ + ++A       +A
Sbjct: 291 QTRQPELLEAFVESVRFLSEREQQKAIDLADSWLQEQPDNAPLLMYLGQLAYGRKLWGKA 350

Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367
                 ++ + P     L+LA++
Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373


>gi|194443869|ref|YP_002043169.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194402532|gb|ACF62754.1| HemY protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 399

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|16767206|ref|NP_462821.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167993868|ref|ZP_02574961.1| HemY protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168238389|ref|ZP_02663447.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168467651|ref|ZP_02701488.1| HemY protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168822698|ref|ZP_02834698.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194737284|ref|YP_002116867.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|204930248|ref|ZP_03221225.1| HemY protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|224585754|ref|YP_002639553.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|16422499|gb|AAL22780.1| protein for a late step of protoheme IX synthesis [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|194712786|gb|ACF92007.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195629961|gb|EDX48621.1| HemY protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197288764|gb|EDY28139.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|204320652|gb|EDZ05854.1| HemY protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205328139|gb|EDZ14903.1| HemY protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205340968|gb|EDZ27732.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|224470282|gb|ACN48112.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|267996213|gb|ACY91098.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|312915054|dbj|BAJ39028.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320088346|emb|CBY98106.1| Protein hemY [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322613015|gb|EFY09966.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322617397|gb|EFY14297.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322625611|gb|EFY22433.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322627034|gb|EFY23827.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322638283|gb|EFY34982.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642781|gb|EFY39368.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646977|gb|EFY43479.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650364|gb|EFY46777.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656345|gb|EFY52639.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322657570|gb|EFY53840.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665981|gb|EFY62162.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666720|gb|EFY62897.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671037|gb|EFY67167.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322679256|gb|EFY75308.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681660|gb|EFY77687.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686013|gb|EFY82001.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322716899|gb|EFZ08470.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323132283|gb|ADX19713.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323192639|gb|EFZ77867.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196505|gb|EFZ81655.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203743|gb|EFZ88764.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323205382|gb|EFZ90356.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210751|gb|EFZ95627.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215919|gb|EGA00652.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221412|gb|EGA05830.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323227311|gb|EGA11478.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323231755|gb|EGA15866.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323236170|gb|EGA20247.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239593|gb|EGA23641.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244311|gb|EGA28319.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323249592|gb|EGA33504.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323250316|gb|EGA34202.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323256523|gb|EGA40254.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323259779|gb|EGA43412.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265187|gb|EGA48685.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323268384|gb|EGA51856.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326625655|gb|EGE32000.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332990771|gb|AEF09754.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 399

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|16762199|ref|NP_457816.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29143688|ref|NP_807030.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213051701|ref|ZP_03344579.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213623042|ref|ZP_03375825.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|289825619|ref|ZP_06544797.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25371608|pir||AG0920 Porphyrin biosynthetic protein [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504503|emb|CAD09385.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139323|gb|AAO70890.1| porphyrin biosynthetic protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 399

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|6960266|gb|AAF33456.1| 96% identity with E. coli hemY protein (HEMY) (SP:P09128); contains
           similarity to Pfam family PF00515 (TPR Domain),
           score=18.7, E=0.13, N=1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|322631250|gb|EFY28013.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
          Length = 398

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 192 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHQPEEAA 381


>gi|239993014|ref|ZP_04713538.1| uncharacterized enzyme of heme biosynthesis [Alteromonas macleodii
           ATCC 27126]
          Length = 391

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 64/351 (18%), Positives = 120/351 (34%), Gaps = 9/351 (2%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             V  + GN     +      +L   + AW +L  +  + LS               K  
Sbjct: 29  GYVLFSLGNTAVEMNIISFGILLIGAVIAWYVLSRLVLWALSLITGSHKWFGTLGERKRK 88

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +A Y GL ++AA +   A+K    +S+      E + YL   QIA A      A   L  
Sbjct: 89  RAFYDGLHAMAAGDFDTAQK---ALSKTTNGDFEGVNYLASAQIAFANDDLAKARYFLVQ 145

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
               P  +  A              ++A     +  +   +   V +   Q      +W 
Sbjct: 146 ATDFPKAKVAATVMHARIDMAEEKYDAALEKLNELDEQERENKQVVQLKAQILAKLGKWQ 205

Query: 206 RAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK--LCDNSIM 261
                L+  +K     ++      +   +  E A K   +          +    D++  
Sbjct: 206 VLQENLSGWRKALPKADYTAWSQRIAKGKFAEIASKQGAVELKSYWETLPRKLRHDDAYR 265

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A+    + L+ Q     A+ +L +  K  P+  +  ++T L   +    L+      + +
Sbjct: 266 AAYI--QQLLDQGMHADAQNLLVEWQKRGPNSALFPLFTQLNIPDASPSLRLLESWIKQD 323

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           +E+V     + ++A   G    A    + A K+  RKE  LLL+ I +   
Sbjct: 324 EENVSLYSTLGQVAFNSGDDVLAEKALLKATKMKSRKEDLLLLSAISERKH 374


>gi|221134059|ref|ZP_03560364.1| HemY-like protein [Glaciecola sp. HTCC2999]
          Length = 387

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 126/383 (32%), Gaps = 42/383 (10%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSC---PAMLFHMLHKRNYD 82
             V I   +     S   +  +++  +  +++L    +  +              +R   
Sbjct: 26  GYVLIALKHTTIEMSVISLGIMVFIAVIGFLILEWAVKRIVGAISGSHHWLGSWGERRRQ 85

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQ--------QHTFHNEY-LVYLLEV-----Q 128
           + Y    +G+ ++A  ++  A+K  S  ++              E  L + ++      Q
Sbjct: 86  RFY---TSGMQALAEGDLNHAQKWLSKTTKADFDGINLLALADVEAKLGHQVKAMQYWEQ 142

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A  +     A      M +   T+         ++  I D  S Q+         P+  
Sbjct: 143 AAAIKGSELAAK---LNMARFEITQNHG-----KQALSIIDSLSIQQ------KQKPNVI 188

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               + +     A EW      L    K      R      +A   + A+  +   +   
Sbjct: 189 ETWASAL---AAAGEWHALRERLESGWK-KPLGQRYPYWAELASKADFAEIANRDGANEL 244

Query: 249 AIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
             E  KL       I       + LI+Q   ++AE  L    K  P   +  ++  L   
Sbjct: 245 MQEWQKLPRGYKKEIPHQKAYIEQLIAQGMHQEAEKALVTAQKSGPEITLLPLFKLLQLP 304

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                +K   +  + + ++      ++ +A   G+   A      A+++   +E  LLLA
Sbjct: 305 KPTAAIKLLEKWIKKDNKNAVLYSTLAHVAFHSGNAILAEKALNQALELDNHQEDILLLA 364

Query: 366 QIEQANSHNTDKILYWTQSALHA 388
           +I +A   N+D+ L   +  L A
Sbjct: 365 EI-KAQQANSDEALALYKQGLSA 386


>gi|213419348|ref|ZP_03352414.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 397

 Score = 70.0 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 20  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 79

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 80  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 137

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 138 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 190

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 191 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 250

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 251 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 310

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 311 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 370

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 371 DRLHQPEEAA 380


>gi|326796009|ref|YP_004313829.1| hypothetical protein Marme_2766 [Marinomonas mediterranea MMB-1]
 gi|326546773|gb|ADZ91993.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinomonas
           mediterranea MMB-1]
          Length = 390

 Score = 70.0 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 105/335 (31%), Gaps = 39/335 (11%)

Query: 47  ILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALY----TGLMSIAAHNIPL 102
            L+  LF  + +  V          +     ++   +  K +      GL  +       
Sbjct: 5   GLFLVLFIALFVGWV----------MGRRRSEKPTKQELKTISSDYFRGLNHLLNGQQSE 54

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  + ++V         + ++L    +   + +   A    + +L  P   E  +     
Sbjct: 55  A--IDAFVDSLEVNSETFDIHLTLGNLFRKKGEIEKAINVHQNLLARPDIGEREMR--LV 110

Query: 163 ESCRIGDLNSA--QRYATK-----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +     D  SA     A +     A   +     +   ++  Y   + W +AI    Q +
Sbjct: 111 QLELASDFMSAGLLDRAERLLLNIAARKTEFQAQILTLLIDLYEFEQSWDKAIRISEQSQ 170

Query: 216 KNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           K        +  A      +     K     ++     +L      + AS+  A+ L  Q
Sbjct: 171 KAKPSVKEAQRLAHFHCELAQVQVKKEQWKQAFTHFRNALDADPKCVRASVGMAEVLCEQ 230

Query: 274 NKKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
            + R A   L+ + + +P       P + + Y  + S +          L E NK+   +
Sbjct: 231 RRYRDAIKELKNVAEQDPDFIPVILPNLKDAYQRVWSGSGYH-----QFLVEQNKDHSSA 285

Query: 328 LVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            +I++            A    +  ++I P  + F
Sbjct: 286 SLILALAKHYAQDDKRFAEQFLIEQLRIHPTIKGF 320


>gi|251787827|ref|YP_003002548.1| putative protoheme IX biogenesis protein [Dickeya zeae Ech1591]
 gi|247536448|gb|ACT05069.1| HemY protein [Dickeya zeae Ech1591]
          Length = 398

 Score = 70.0 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 49/374 (13%), Positives = 114/374 (30%), Gaps = 27/374 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   +    TS   ++ +L  F+ A++ +  V R  L            R 
Sbjct: 21  LAGHQGYVLIQTDSYNIETSVTGLVIMLVLFMLAFLAVEWVVRRVLRTGVRTRGWFIGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  +     L+ +   +     K+ +  +         + YLL  + A          
Sbjct: 81  RTRARQQTKAALLKLTEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTR 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    + L+++P  P V  
Sbjct: 139 QYLERAAEIADSNQLPVDITRV-------RIQLARNEDHAARHGVDRLLEVAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIAS 245
              Q ++    +S  +  L   +K          E  +   I L+ +++    +G     
Sbjct: 192 LAEQAFLRTHAYSALLDILPAMRKTRLHDEPYLDELQQRATIGLMDQAM---AEGGSEGL 248

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                   +    ++   +  A+ LI  +    A+ I+    K      +  +   L + 
Sbjct: 249 KQWWKNQPRKARQALPMQVAMAERLIVCDDHTTAQDIVVDGLKQQFDHRLVQLIPRLNAG 308

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                 K   +  + +         + ++ ++ G   QA      A+ + P    +   A
Sbjct: 309 QPEPLEKLLRQRLKQHHNDALLHSTLGQLLMKHGEWQQASDAFSAALALRPDAYDYAWCA 368

Query: 366 QIEQANSHNTDKIL 379
                     D   
Sbjct: 369 DAFDRLKRPEDAAR 382


>gi|207859141|ref|YP_002245792.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|206710944|emb|CAR35311.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261249059|emb|CBG26919.1| porphyrin biosynthetic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301160451|emb|CBW19980.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 379

 Score = 70.0 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 2   IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 61

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 62  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 119

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 120 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 172

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 173 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 232

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 233 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 292

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 293 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 352

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 353 DRLHQPEEAA 362


>gi|197249193|ref|YP_002148861.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197212896|gb|ACH50293.1| HemY protein [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
          Length = 399

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R               R 
Sbjct: 22  IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGTHTRGWFAGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|240127756|ref|ZP_04740417.1| HemY protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268686147|ref|ZP_06153009.1| HemY protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268626431|gb|EEZ58831.1| HemY protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 405

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV +  G  + R +    +      +  W  LF 
Sbjct: 1   MKTVVWIVVLFAAAVRLALASGIYTGDVFVVVGQTMLRINLHAFVLGSLIAVVVWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  +      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPENMRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++ +   +    ++      +   A+  L + +K +K     ++ +   ++     
Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    A        LK   +S+     S+  A+          A   +++ +  N  PE+
Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297

Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L        +  A    +   ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379
           + + P     L+LA++  E A S   +   
Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387


>gi|259906878|ref|YP_002647234.1| putative protoheme IX biogenesis protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224962500|emb|CAX53955.1| Protein HemY [Erwinia pyrifoliae Ep1/96]
 gi|283476671|emb|CAY72499.1| Protein hemY [Erwinia pyrifoliae DSM 12163]
          Length = 396

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 23/371 (6%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  +L   L   + +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTNNWNIETSVTGMTIVLLLSLVIILAVEWLLRRVFRTGARTRGWFTGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
                K  +  L+ +A  +     K+              + YLL  + A        A+
Sbjct: 81  RRSARKQTHAALVKLAEGDYKQVEKL--LSRHADHAEQPMVNYLLAAEAAQQRGDETRAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    + L+I+P  P V  
Sbjct: 139 QHLERASELNDDDPLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247
              Q YV  + W   +  L    K +     +R    +   L   S   AD+G       
Sbjct: 192 LAEQAYVRTQAWGALLNILPAMEKIQPGDATHRLELQQQCWLGLMSQAMADQGSDGLKRW 251

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
              +S K   N     +  A  LI  +    A+ I+ +  K +    +  +   L + N 
Sbjct: 252 WQNQSRKTR-NETALQVAMADHLIVCDDHDTAQKIVLEGLKRHFDERLVMLMPRLKTGNP 310

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               K   +  + +  +      + ++ ++ G  + +      A++  P    +  LA  
Sbjct: 311 EQLEKALRQQIKQHGATPLLHSTLGQLLMQHGEWELSSEAFRAALQQRPDAFDYAWLADT 370

Query: 368 EQANSHNTDKI 378
                   +  
Sbjct: 371 LDRQHKPEEAA 381


>gi|119899480|ref|YP_934693.1| hypothetical protein azo3190 [Azoarcus sp. BH72]
 gi|119671893|emb|CAL95807.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 933

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/379 (13%), Positives = 111/379 (29%), Gaps = 50/379 (13%)

Query: 51  FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110
           FL A +L   V              L+K       +AL   L+  +  +   A +    +
Sbjct: 308 FLPAHLLAGTVLMRLNDNEQA-RSHLNKVLERAPNQALARRLLVASYLSSGQAARAMEAL 366

Query: 111 SQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
               +  N     L L  Q+ +A    + A      +  +      A   L       G 
Sbjct: 367 QPLLSEANPDAGLLSLAGQVYMASGDADKAETFFARLTTLAPESAQARAQLGAARFATGA 426

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRA 226
            + A      A  + P       A+V  Y+  ++++ A+     L  K+ +  + +  + 
Sbjct: 427 ADRAFDDLEAASALDPTNARADVALVLAYLGRRQFAEALAAHAKLEAKQPDNPQTHNLKG 486

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           ++L           D   +     ++L+L  + + A     +  ++  K   A   +EK 
Sbjct: 487 VVLAG-------ANDPAKARAAFEKALELKPDFLPAVANLIRLDLADKKPDAARARMEKA 539

Query: 287 WKVNP--------------------------------------HPEIANIYTHLLSENTV 308
            +  P                                       P++A +  HL      
Sbjct: 540 MQAAPKNADVLLAYAELQNTLGDPSEAVAATIEQAIKIDPNALAPQLALVRYHLQKREAA 599

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
             L    +L   +  + + L ++ +  +  G + QA       +   P+    L+     
Sbjct: 600 TALPLVQKLAAAHPNNPQVLDVLGRSLVATGDLQQAVNVFTRLIAQQPQAAGPLVTLADA 659

Query: 369 QANSHNTDKILYWTQSALH 387
                +        + AL 
Sbjct: 660 HRLRKDNTSAEQALRKALD 678



 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 82/266 (30%), Gaps = 10/266 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A  + ++   +    +    + L+  +         A    E  L++      AV
Sbjct: 457 GRRQFAEALAAHAKLEAKQPDNPQTHNLKGVVLAGANDPAKARAAFEKALELKPDFLPAV 516

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L          ++A+    KA+  +P    V  A  +      + S A+    ++   
Sbjct: 517 ANLIRLDLADKKPDAARARMEKAMQAAPKNADVLLAYAELQNTLGDPSEAVAATIEQAIK 576

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                    + L+   L+  +    +        +       +       +SL++    +
Sbjct: 577 IDPNALAPQLALVRYHLQKREAATALPLVQKLAAAHPNNPQVLD---VLGRSLVATGDLQ 633

Query: 278 KAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +A  +  ++    P    P +     H L ++     +   +  +I    +E+     + 
Sbjct: 634 QAVNVFTRLIAQQPQAAGPLVTLADAHRLRKDNTSAEQALRKALDIQPNLLEAQ----QR 689

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEI 360
            + +    +A  +A+   K   ++  
Sbjct: 690 LIALLVERKASREALALAKTVQKQRA 715



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 75/258 (29%), Gaps = 37/258 (14%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A    E  L + A    A   L       G +  A+  A  AL     +      
Sbjct: 153 GDLAAARRAFEAALNLDAEESDARVGLARTKLAGGAVAEARADAEAALARDAKSAEAYIV 212

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----------------------- 230
           +    ++    + A   L    +   +       L+                        
Sbjct: 213 LADAALMEGRPADAAKALESALQQRPDNVGYHFALISLLFRQDDGEAAAAKLARMAEVAP 272

Query: 231 -------ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                   ++     K  +  +  D + +LK   + + A + A   L+  N   +A   L
Sbjct: 273 NHPFTRYLQAFHKYRKNQLKEARDDVMLALKSAPDFLPAHLLAGTVLMRLNDNEQARSHL 332

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALR----LEEINKESVESLVIVS-KIALEM 338
            K+ +  P+  +A         ++    +        L E N ++   L+ ++ ++ +  
Sbjct: 333 NKVLERAPNQALARRLLVASYLSSGQAARAMEALQPLLSEANPDA--GLLSLAGQVYMAS 390

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G  D+A         +AP
Sbjct: 391 GDADKAETFFARLTTLAP 408


>gi|170719446|ref|YP_001747134.1| HemY domain-containing protein [Pseudomonas putida W619]
 gi|169757449|gb|ACA70765.1| HemY domain protein [Pseudomonas putida W619]
          Length = 412

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 131/372 (35%), Gaps = 18/372 (4%)

Query: 19  IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78
           I V+ +   V I++G   Y++  +  L+ L   L    LL  +    L+   ++     +
Sbjct: 20  IAVAKHSGYVLISYGGFRYQSGLWAALAALVAVLALLWLLRYLVGLVLTSSGVVNPWSRR 79

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
               +   A+  G + +A      A++ +H     +       L YL   + A  + +  
Sbjct: 80  NRSRRIRIAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRKE 136

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
                LE  L+     E AV   + +     G+ + A        +  P    V   + +
Sbjct: 137 DRDNLLERALERQPQAELAVALTHAQLQMDRGESDGALEALLAMQERHPHNSQVLRLLQR 196

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248
            Y+   +WS  I  L   +K         A L        L   +    D+     S   
Sbjct: 197 LYLERGDWSALIRLLPDLRKGKVLPPEELAALEQRAWGQNLGLAATRGDDEQSARQSLER 256

Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           A + L          + A A+ L     + +AE +L    K +    +A +Y  +  ++ 
Sbjct: 257 AWQQLTAAQRQEPRLVLAYAEQLRQVGAQGEAEQVLRAALKRDYESHLARLYGLVRGDDP 316

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLL 363
             +L+ A    + N +    L+ + +++L+     +A      ++++        E+  L
Sbjct: 317 ARQLQTAEGWLKANPQDPSLLLTLGRLSLQNRLWGKARDYLESSLRMERNPETCAELARL 376

Query: 364 LAQIEQANSHNT 375
           LA + +    N 
Sbjct: 377 LAGLGETERSNQ 388


>gi|301060387|ref|ZP_07201250.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300445583|gb|EFK09485.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 785

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 41/267 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +I  A  +   A E+   +L+       A  +L       G LN A ++  KAL ++ +
Sbjct: 460 ARILAANGKKREATEQYLSVLESDPGFVQAHVNLANILADQGYLNEAVKHYEKALTLNRE 519

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +   +  A     AI     + + A +   N   +           G+   + 
Sbjct: 520 NANARYNLANTFFRAGRTDDAI----AQYRKALDIRPNDPSIHYNLGNAYMRNGNFEQAV 575

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYT- 300
               E+L+   + + A +    +L      RKA +  EK     P HP     +A  +  
Sbjct: 576 SQYSEALRYQPDFVNARVNLGNALARSGNPRKAILQYEKALASQPDHPGAHYNLAGAFAA 635

Query: 301 ---------------HLLSENTVGKLKRALRLEE----------------INKESVESLV 329
                           L  E+   + +  L L                  I    VE+ +
Sbjct: 636 SGKTQKAVVHYKEVLRLQPEDATARFQLGLILSNSGRHSEGEEQFSIALQIKPNFVEARI 695

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
            ++      G   +A A    AMK+ P
Sbjct: 696 ALADELAVQGKTSEAVAHYNEAMKMNP 722



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 11/162 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A  WS + T      ++  +   N  +     +     +G+   +      +L++C   
Sbjct: 397 QAGYWSDSETLF----RHGLQVVPNNYVAHNGLARALEAQGETDEAIRHFETALRICPGF 452

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314
                  A+ L +  KKR+A      + + +P     H  +ANI            +K  
Sbjct: 453 TDGRYNFARILAANGKKREATEQYLSVLESDPGFVQAHVNLANILAD--QGYLNEAVKHY 510

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +   +N+E+  +   ++      G  D A A+   A+ I P
Sbjct: 511 EKALTLNRENANARYNLANTFFRAGRTDDAIAQYRKALDIRP 552



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 11/197 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G  + ++      L + P+       + +      E   AI       +    +   R
Sbjct: 397 QAGYWSDSETLFRHGLQVVPNNYVAHNGLARALEAQGETDEAIRHFETALRICPGFTDGR 456

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                  +   A  G    +    +  L+     + A +  A  L  Q    +A    EK
Sbjct: 457 ----YNFARILAANGKKREATEQYLSVLESDPGFVQAHVNLANILADQGYLNEAVKHYEK 512

Query: 286 IWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                    N    +AN +    +  T   + +  +  +I          +    +  G+
Sbjct: 513 ALTLNRENANARYNLANTFF--RAGRTDDAIAQYRKALDIRPNDPSIHYNLGNAYMRNGN 570

Query: 341 IDQAHAKAMLAMKIAPR 357
            +QA ++   A++  P 
Sbjct: 571 FEQAVSQYSEALRYQPD 587


>gi|146329028|ref|YP_001209216.1| HemY protein [Dichelobacter nodosus VCS1703A]
 gi|146232498|gb|ABQ13476.1| HemY protein [Dichelobacter nodosus VCS1703A]
          Length = 445

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 117/372 (31%), Gaps = 45/372 (12%)

Query: 32  WGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG 91
           +G     T    ++     F F +I LF +  F  + P +    L  R  +K  + L  G
Sbjct: 32  FGRYQIETHFINLVLASILFGFLFITLFRILFFIWNTPTIFSRNLKVRKKNKADRLLRGG 91

Query: 92  LMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIA---LAERQYN-----IAHEK 142
           L  +   N   A +K+ +            ++Y     IA                A E 
Sbjct: 92  LNDLGVGNYKCAEKKLANGGDLAEQLGISPVIYFENAAIAADRQQAFDRRDQYFIRARET 151

Query: 143 LEM--MLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           ++    +     R    +S +        +    Q Y   A         V   + + YV
Sbjct: 152 VQAHDAVSRKVMRLTEAHSYILNHQFTQAESILNQLYQEDA-----KNSKVIAMLDEVYV 206

Query: 200 LAKEWSRA---ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             K+W RA   ++ L  +        R              D+           E+L   
Sbjct: 207 GKKDWERAWLHLSTLRNQLSAEVFNERKLKYAQEMVQAALHDE-----------EALSRV 255

Query: 257 DNSIMASICA--------AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
              + A + A        A +L  +    + E +L +  K N   ++  +Y+ L   N  
Sbjct: 256 WQHLPAELHAEKSLLLPYASALHEKGHAEEIEKLLAQQIKYNGDLDLIQVYSQLRGINFN 315

Query: 309 GKLKRALRLEEINKESVESLVIV---SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             LK    + +      E+ + +   ++IA      + A      ++K+ P  + F L  
Sbjct: 316 RALK---NMNDWASMHAENSIFLYCHAQIAYRAKDYETAARCIEASIKLHPTPQAFALWG 372

Query: 366 QIEQANSHNTDK 377
           QI +A       
Sbjct: 373 QILEATDKPGAA 384


>gi|332290272|ref|YP_004421124.1| putative protoheme IX biogenesis protein [Gallibacterium anatis
           UMN179]
 gi|330433168|gb|AEC18227.1| putative protoheme IX biogenesis protein [Gallibacterium anatis
           UMN179]
          Length = 421

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/409 (14%), Positives = 131/409 (32%), Gaps = 65/409 (15%)

Query: 1   MLRLIRYFFVISLVIC-SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R++ +  +I LV       +S     V I   +     S  +++      L     + 
Sbjct: 1   MFRVL-FLMIILLVGFIGGPYISGKQGYVRILTESHSIEMSITMLVIFFVIALALVYGIE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V   F    +  ++    R   K  + +  G + +   N   A K+    ++       
Sbjct: 60  WVISRFFRLSSGTYNWFSVRKRRKAQQQILQGFVKMDEGNYAKAEKLIGKNAKH--SSEP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE------SCRIGDLNSA 173
            L ++   + A        A++ L     I AT      +L  E        +   L +A
Sbjct: 118 ILNFVKAAEAAQQRGDEFSANKYL-----IEATELAGSDNLIVELARTRILLQQNKLPTA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVL----------------AKEWSRAI--------- 208
           +      L ++P    V    V+ Y+                 +  ++ A          
Sbjct: 173 RTAVDSLLVLAPQNVEVLRLAVEIYLRSHAYLALDNLLPKIGKSGLYAEAEFMQLQHQVV 232

Query: 209 -TFLNQKK------------KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              L++K             ++     R  +  ++       D  D  ++Y  A++S K 
Sbjct: 233 DGLLDEKMNEDGIDGLLKWWEDQPRSRRQNSYAIVGMIRRLIDSDDHDSAYQLALDSFKR 292

Query: 256 CDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
            ++S M +     A+  ++     K    LEK  K     ++   +   +   ++    R
Sbjct: 293 IESSEMLAFVTQIARLQVA--NSSKIMKWLEKSAKSQTDAKLNCAFARAIGYLSL----R 346

Query: 314 ALRLEEINKESVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEI 360
           A   ++       + ++ ++    +E+     A   A  A  +A  ++I
Sbjct: 347 ANEFDKAR--QAFAKILATEDKADIEVQDYTVAAYLAEKANDMAAAQQI 393


>gi|152980339|ref|YP_001352835.1| HemY protein [Janthinobacterium sp. Marseille]
 gi|151280416|gb|ABR88826.1| HemY protein [Janthinobacterium sp. Marseille]
          Length = 398

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/399 (13%), Positives = 109/399 (27%), Gaps = 19/399 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R+  +  V+        +V+     +V   +       S    + +     F    +  
Sbjct: 1   MRIFLWLLVLFATAIGLAVVARFNAGNVVFFYPPYRVDLSLNFFILLSVLLFFLIYAVLK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV-SQQHTFHNE 119
             R     P  +      +   KG +AL   L +        A K               
Sbjct: 61  TVRVAQKMPGKVAAYRRDKQERKGNQALRESLKAYFEGRFGHAEKAAMRASDSSDNSGLA 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L+            + +     +E    +   R      L  +  +      A     +
Sbjct: 121 ALIAARAAHRMQQTERRDTWLATVEEDQSLKTARLMTAIELLVDERQ---PELALDVVKE 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLE 235
                          ++    A  W   +  +         +    +R R +        
Sbjct: 178 LNANGTRHIHALRMALKANQRANNWPEVLRLVRTLDKNNALHPALSSRLRELAYQDLLKN 237

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            ++  + + +   AI +       +  +I  A +   +     A  I+EK   V     +
Sbjct: 238 PSNDAESLRNIWWAIPAEDRVKAYV--AIHGANAFNQRGLHDDARAIIEKSMAVEWDERL 295

Query: 296 ANIY-THLLSENTVGKLKRALRLEEI---NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              Y      E +   L +  R EE    +    E  + +  + L      +A      A
Sbjct: 296 LRPYRASAAGEGSPALLAQIERCEEWGKTHPTDPELALTLGTLCLRQNLWGKAQRHLEQA 355

Query: 352 MKIAPRKEIF----LLLAQIEQANSHNTDKILYWTQSAL 386
           +  A    +     L LAQ+ +A  H  +   ++ Q A+
Sbjct: 356 LSDANGARMLQEVHLKLAQLHEALGHEAEAASHYRQCAV 394


>gi|77920168|ref|YP_357983.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77546251|gb|ABA89813.1| TPR domain protein [Pelobacter carbinolicus DSM 2380]
          Length = 451

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/296 (11%), Positives = 95/296 (32%), Gaps = 14/296 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+ L+ + F++ ++      + +        W    + +S  V+++           L  
Sbjct: 1   MI-LMAFVFLVLIIFFLLFYILNPQTVAVFYWFGNEFTSSLAVVVAASVLSGLLIGYLLY 59

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +                ++ +          +  + + ++  +R++      Q     E 
Sbjct: 60  IYGATGHLVRDWRRKRTEKRHRSVMDLYRQAMGRLVSGDLKKSRRLLLKAHGQDGTQLEV 119

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYA 177
           L  +   ++  AE Q + A E    +L+        +  L+  +        +  A    
Sbjct: 120 LQAM--ARVCRAEGQPSEALEY---LLKARKQSAENLQVLFLLADTYLAADQVEDAVATY 174

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAILLIAR 232
              L + PD       +   ++ ++ W+ A     +  K        +  R R  L +  
Sbjct: 175 RSILAVEPDNLEALRRLRDLHMRSELWNEASDLQKRLLKKLGGTPDNQEQRIRCGLRLET 234

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           +    + G    +  D    +K   + + A +    +     + ++A  + ++ ++
Sbjct: 235 ARMVLESGRADTAAADLKALVKDQPDFVAARVLLGDAWEVAGQPQEAAGVWQEGYR 290


>gi|91791752|ref|YP_561403.1| HemY-like protein [Shewanella denitrificans OS217]
 gi|91713754|gb|ABE53680.1| HemY-like protein [Shewanella denitrificans OS217]
          Length = 396

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 145/388 (37%), Gaps = 17/388 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++ +    +I + +C   +       V I  G     TS  V ++ L   +   +L   
Sbjct: 1   MIKALIIVAIILIGLCVSPLFIDNTGYVYIAIGEYQIETSLIVAITALVATVIIMLLTKW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    ++      H+  +       K    G +++AA + PLA K     +         
Sbjct: 61  LLGLIINLALSSKHLPLRWRQSAAKKHTLQGAIAMAAEDWPLAEKSMLKGAANGEL--PT 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179
           L  L+  Q A  +++   A ++         T + AV  S      + G+ + A+    K
Sbjct: 119 LNLLVAAQAAHKQKKTQ-ARDEYLASAAAEPTAQEAVSISKIRFFMQDGEFSLARMELDK 177

Query: 180 ALDISPDAPWVTEAV-VQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234
            L  +  +P     + ++ Y   K+W +A+  L     +K+  + E          ++ +
Sbjct: 178 -LTPTSKSPDAIIRISLELYPKLKDW-QALKTLLPIAQKKQLASTEIINQLTFDANSQLV 235

Query: 235 ENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             A   +       +H   +S +        ++   K LIS     +   +L K+ K  P
Sbjct: 236 AQAATKNTQELDKVWHWLSKSERQDPLL---ALIYIKGLISFGLAEEGNKLLIKLVKHEP 292

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              I      L++       K+ +R E   +        V+K+ L+   I +A  +   A
Sbjct: 293 CGTIFEALPELVTAQDSEIRKQLMRHEASFENDASYQACVAKLCLQSRDIKEAKIRLQSA 352

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379
            ++AP+ E +L LAQ+++    NT+   
Sbjct: 353 CRLAPKSEYWLALAQVQEQLGENTNAAQ 380


>gi|196230691|ref|ZP_03129552.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196225032|gb|EDY19541.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 684

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 78/229 (34%), Gaps = 11/229 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +   A      +L +       +++L   + + G L  A+    KAL +      +  
Sbjct: 17  AGRLAEAEAIYRQILGVQPNHVGVLHNLGLIAVQTGRLAMAEELIRKALGLDAGNAIIHC 76

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++ + Y        A+    +  +    +            L  AD+G +  +      +
Sbjct: 77  SLGEVYRTQGRPQEAMESYQRALQLRPGYPE----AASNLGLVLADQGRLSEAAAACRSA 132

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENT 307
           L+   +   A     K L S     +A    ++   + PH   A  + +L      S   
Sbjct: 133 LQSRPDFAPAHNILGKILGSSGDFAQAIASFQQALAIQPH--FAEAWNNLGVTYHESGQA 190

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              L+   R  ++N  + E    + ++  ++  +D+A A    A+ + P
Sbjct: 191 GPALEALQRAAQLNPNAPEIHNNLGRLLGDLDQLDEAIAAYRRALDLHP 239



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 71/222 (31%), Gaps = 27/222 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+++    + +A ++          +   +++    ++   + +   A E  +      
Sbjct: 45  GLIAVQTGRLAMAEELIRKALGLDAGN--AIIHCSLGEVYRTQGRPQEAMESYQ------ 96

Query: 151 ATREFAVYSLYFESCR--------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
             R   +   Y E+           G L+ A      AL   PD       + +    + 
Sbjct: 97  --RALQLRPGYPEAASNLGLVLADQGRLSEAAAACRSALQSRPDFAPAHNILGKILGSSG 154

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           ++++AI    Q       +    A       +   + G    +      + +L  N+   
Sbjct: 155 DFAQAIASFQQALAIQPHF----AEAWNNLGVTYHESGQAGPALEALQRAAQLNPNAPEI 210

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIY 299
                + L   ++  +A     +   ++PH P+    +A  +
Sbjct: 211 HNNLGRLLGDLDQLDEAIAAYRRALDLHPHFPDAYNGLAQAF 252


>gi|251772048|gb|EES52620.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 466

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 62/447 (13%), Positives = 131/447 (29%), Gaps = 43/447 (9%)

Query: 28  VSITWGNRLYRTSPFVILSILYFFL-FAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYK 86
           VS           P + L +L F L  A + L       L     L     ++  ++   
Sbjct: 27  VSFQILPHQVLLLPQITLIVLAFSLGAALVFLIHGLSDLLGWVKNLRESRDEKRAERAQA 86

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
                   I   ++P A  +   +      H E L  LL   +  +   Y  A       
Sbjct: 87  LWKRTWTEINRSHMPQALSVLERLVALFPDHREAL--LLLGDLKRSSGDYVGAIRIHRRA 144

Query: 147 L--QIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
                   R   A+ + Y  + R+ D   A     +          V E   +  +    
Sbjct: 145 RVFDEEDVRLILALATDYECAERVED---ALVLFREYFKKEGRNREVLEEFRRLLMREDR 201

Query: 204 WSRAITF---LNQKKKNAKEWNRNRAILLIAR---SLENADKGDMIASYHDAIESLKLCD 257
           W  A++    L +  +  +  +R  A+L+  R         +G+   +      +LK+  
Sbjct: 202 WEEALSVQTALARSFEKGERRDREVALLVGLRFEVGSLLHRQGNTEGARRAFRGALKIDP 261

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT------HLLSENTVGKL 311
               A +  A++ I++ ++++    L++ W          +Y       +L   N    L
Sbjct: 262 AFTPARLGLAEAQIAEGREKEGIENLQEGWTRT----SETLYLVRLEEFYLEKGNPDAIL 317

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQA 370
               +  + +  +       +++   +G  D++ +        A      + L+ +I + 
Sbjct: 318 SLYSKALDRHPANPSLSFHKARVYNRLGMEDESLSLLESLEGEAAWGGEYYRLMGEIYEK 377

Query: 371 NSHNTDKI---LYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYFEWKIPTKS 426
                  +          L    D  +   +       W    P        +W      
Sbjct: 378 RHQMDLALECFRRILSLEL--PFDLPYGCRNCRTFFPEWSGRCPSCH-----QWNT---- 426

Query: 427 PEYISSENINFSLEMAYPADDLQSMLN 453
                ++        A P  D  + L+
Sbjct: 427 --IFRTDGQVLPGSGAPPVVDPATALS 451


>gi|123788588|sp|Q3UV71|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1
 gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus]
          Length = 942

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 586 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 645

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 646 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 702 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 756

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     E  + ++++   MG   +A       +   PR  E + L
Sbjct: 757 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H   K L   + AL     DP
Sbjct: 817 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 845


>gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus]
          Length = 942

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 586 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 645

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 646 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 702 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 756

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     E  + ++++   MG   +A       +   PR  E + L
Sbjct: 757 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H   K L   + AL     DP
Sbjct: 817 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 845


>gi|89074442|ref|ZP_01160919.1| hypothetical HemY protein [Photobacterium sp. SKA34]
 gi|89049730|gb|EAR55280.1| hypothetical HemY protein [Photobacterium sp. SKA34]
          Length = 396

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/393 (13%), Positives = 131/393 (33%), Gaps = 11/393 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M++L+     +   I     ++     V I+  N+    S   ++ ++      ++LL  
Sbjct: 1   MIKLLLLVLALIAGIIVGPELAGNQGYVLISTANQTIEMSLTTLVVLIVALFAVFLLLEF 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +   S  +        R   K       GL+ +   +   A K+ +  ++        
Sbjct: 61  ILKRVFSISSSTRGWFSGRKVRKARIQTSAGLLKVTEGDWKPAEKLLTKSAK--FSDAPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L YL   + A    +     E L+   ++ +       +      R      A     + 
Sbjct: 119 LNYLAAAEAAQGLGKTEQRDEYLKQAAELDSQNLAVALTRAKLQIRQQQFEQALATLQEV 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS----LEN 236
              +   P V   + + Y+  ++W   +T L    K      +  A++L  ++    +++
Sbjct: 179 QQDNARNPIVLGLLQECYLKLEDWKSLLTLLPLLTKAG-VITQEEALVLDEQAQCGQMQH 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             + +          ++   D    A   C  K +++++    A  IL    K +    +
Sbjct: 238 LGQQNGTDGLVGYWNNMGRKDKQNPALVACFIKQMMARHADNDAYPILRDALKKSQDERL 297

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++   L   +    + +   L   +  +  +   + ++ +  G+  +A      A+ + 
Sbjct: 298 ISLVPQLNLPDRHPAIIKLQELLRQDGNNAVTHSALGQMLMAEGNWQEAKEHFERAVAVR 357

Query: 356 PRKEIFL-LLAQIEQAN--SHNTDKILYWTQSA 385
           P    +  L+A +EQ N             + A
Sbjct: 358 PDMADYAHLVATLEQLNDKQGAAAASRQALELA 390


>gi|282898924|ref|ZP_06306907.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196178|gb|EFA71092.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 862

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 96/280 (34%), Gaps = 16/280 (5%)

Query: 94  SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--P 150
           ++A + +   A     +        ++ +      +       Y  A E  E  LQI   
Sbjct: 153 ALADSGDYKKA--CEIFERSLQINPDDTITLNSYGKALADSDDYKKACEIFERSLQINPD 210

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T     Y         GD   A     ++L I+PD      +  +    + ++ +A   
Sbjct: 211 NTITLNSYG--KALADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEI 268

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  +   +      I L +     AD GD   +      SL++  +  +      K+L
Sbjct: 269 FERSLQINPD----NTITLTSYWKALADSGDYKKACEIFERSLQINPDDTITLTGYGKAL 324

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKR---ALRLEEINKESVE 326
                 +KA  I E+  ++NP   I    Y   L+++     K      R  +IN +   
Sbjct: 325 ADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSG-DYKKACEIFERSLQINPDDTI 383

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           +L    K   + G   +A      +++I P   IF + A+
Sbjct: 384 TLTSYGKALADSGDYKKACEIFERSLQIQPDNYIFFIFAK 423



 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 90/271 (33%), Gaps = 16/271 (5%)

Query: 94  SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--P 150
           ++A + +   A     +        +  +      +       Y  A E  E  LQI   
Sbjct: 119 ALADSGDYKKA--CEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPD 176

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T     Y          D   A     ++L I+PD      +  +    + ++ +A   
Sbjct: 177 DTITLNSYG--KALADSDDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEI 234

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  +   +      I L +     AD GD   +      SL++  ++ +      K+L
Sbjct: 235 FERSLQINPD----DTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLTSYWKAL 290

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKR---ALRLEEINKESVE 326
                 +KA  I E+  ++NP   I    Y   L+++     K      R  +IN +   
Sbjct: 291 ADSGDYKKACEIFERSLQINPDDTITLTGYGKALADSG-DYKKACEIFERSLQINPDDTI 349

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +L    K   + G   +A      +++I P 
Sbjct: 350 TLTSYGKALADSGDYKKACEIFERSLQINPD 380



 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 80/236 (33%), Gaps = 15/236 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                  Y  A E  E  LQI    T     Y         GD   A     ++L I+PD
Sbjct: 17  ALADSGDYKKACEIFERSLQINPDNTITLNSYG--KALADSGDYKKACEIFERSLQINPD 74

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                 +  +    + ++ +A     +  +   +      I L +     AD GD   + 
Sbjct: 75  DTITLNSYWKALADSGDYKKACEIFERSLQINPD----NTITLTSYGKALADSGDYKKAC 130

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTH 301
                SL++  ++ +      K+L      +KA  I E+  ++NP   I           
Sbjct: 131 EIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSYGKALAD 190

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             S++     +   R  +IN ++  +L    K   + G   +A      +++I P 
Sbjct: 191 --SDDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPD 244


>gi|332139554|ref|YP_004425292.1| uncharacterized enzyme of heme biosynthesis [Alteromonas macleodii
           str. 'Deep ecotype']
 gi|327549576|gb|AEA96294.1| uncharacterized enzyme of heme biosynthesis [Alteromonas macleodii
           str. 'Deep ecotype']
          Length = 391

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 129/375 (34%), Gaps = 11/375 (2%)

Query: 10  VISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCP 69
            +  +I   +++      V I+ G+     +      ++   + AW +L   + + LS  
Sbjct: 14  FVVALIVGPMLLGDK-GYVLISLGSTAIEMTVISFCILVIGAVIAWYVLSRFALWALSLI 72

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
                        K  +A Y GL ++AA +   A+K    + +      E + YL   QI
Sbjct: 73  TGSHKWFGTLGERKRKRAFYDGLHAMAAGDFESAQK---SLGKTTNGDFEGVNYLASAQI 129

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A A    + A   L      P  +  A              ++A     +  +   +   
Sbjct: 130 AFANNDLSKARYFLVQATDFPNAKVAATVMHARIDVAEEKYDAALEKLDELDEKERENKQ 189

Query: 190 VTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           V +   Q      +W      L+  +K     ++      +   +  E A K   +    
Sbjct: 190 VVQLKAQILAKLGKWQVLQENLSTWRKALPKADYTAWSQRIAKGKFAEIASKQGAVELKS 249

Query: 248 DAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                 +    D++  A+    + L+ Q     A+  L +  K  P+  +  ++T L   
Sbjct: 250 YWDTLPRKLRHDDAYRAAYV--QQLLDQGMHADAQQHLVEWQKRGPNSALFPLFTQLNLP 307

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           +    L+      + ++E+V     + ++A   G    A    + A K+  RKE  LLL+
Sbjct: 308 DASPSLRLLESWIKQDEENVALYSTLGQVAFNSGDDVLAEKALLKATKMKSRKEDLLLLS 367

Query: 366 QIEQANSHNTDKILY 380
            I +    +T   L 
Sbjct: 368 AISER-HQDTATALQ 381


>gi|15603680|ref|NP_246754.1| HemY [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12722237|gb|AAK03899.1| HemY [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 421

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 55/180 (30%), Gaps = 14/180 (7%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M R++ +  ++ L        +S     V I   +     S  +++      +     + 
Sbjct: 1   MFRVL-FLMLVLLAGLIAGPYLSGKQGYVLIETNSYNIEMSITMLVVFFVIAMAVIYGIE 59

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +   F    +  +H   +R   K  K    GLM +   +   A K+    ++       
Sbjct: 60  VIVTRFCRLSSDTYHWFSRRKRAKAQKQTLEGLMRMNEGDYSKAEKLIGKNAKH--SEEP 117

Query: 120 YLVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGD 169
            L ++   + A        A+  L           +M+++  TR          +    D
Sbjct: 118 ILNFITAAEAAQQRGDEFSANRYLLEATELAGSDNLMVELARTRILLQQGKLPAARSSVD 177


>gi|238784740|ref|ZP_04628743.1| hypothetical protein yberc0001_6000 [Yersinia bercovieri ATCC
           43970]
 gi|238714336|gb|EEQ06345.1| hypothetical protein yberc0001_6000 [Yersinia bercovieri ATCC
           43970]
          Length = 399

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 117/365 (32%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L   L A++++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFMGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            +  +S  +  L      +    +E         I    +   +           +  + 
Sbjct: 199 RSGAYSSLLEILPAIGKVQLHTPEEIAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +  A+ LI  +    A+ I+    K      +  +   L S N     K   
Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A+   P    +  LA          
Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKAREAFAAALAQRPDGYDYAWLADALDKLHRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|163803690|ref|ZP_02197551.1| hypothetical protein 1103602000423_AND4_00010 [Vibrio sp. AND4]
 gi|159172501|gb|EDP57365.1| hypothetical protein AND4_00010 [Vibrio sp. AND4]
          Length = 391

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/343 (17%), Positives = 110/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +A    + A +  E +++ P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +V  Y   +EW +AI + NQ  
Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168

Query: 216 KNAKEWNRNRA---ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K  K+ NR RA         ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGKKRNRIRANISHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRVYLE 228

Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
                   +    +LE  K +  N  P IA  Y HL  E+ + +  RA   ++       
Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISNVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
           S ++++++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKESLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|104784252|ref|YP_610750.1| hemY protein [Pseudomonas entomophila L48]
 gi|95113239|emb|CAK17967.1| putative hemY protein [Pseudomonas entomophila L48]
          Length = 412

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 122/359 (33%), Gaps = 12/359 (3%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           +   V I +G   Y++  +  L  L   +   ++L  +    L+   ++     +    +
Sbjct: 25  HSGYVLIAYGGFRYQSGLWAALGALVGIVLLLLVLRYLIGLVLTSTGVVNPWSRRNRVRR 84

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
              A+  G + +A      A++     +   +     L YL   + A    +       L
Sbjct: 85  DRIAIEQGQLDLAEGRWTSAQRHLQRAA--ESARQPLLYYLGAARAANELGRVEDRDNLL 142

Query: 144 EMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           E  L+     E A+   + +     G+ + A        +  P+   V   + + ++   
Sbjct: 143 ERALERQPQAELAIALAHAQLQMDRGESDGALEALLAMQERYPNNAQVLRLLQRLHLERG 202

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHDAIESLK 254
           +WS  I  L   +K+        A L        L   +    D      +   A + L 
Sbjct: 203 DWSAVIRLLPDLRKHKVLPANELADLEQRAWGQNLGLAATRGEDPQAARQALERAWQQLT 262

Query: 255 LCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                    + A A+ L     + +AE +L    K      +A +Y  +  ++   +L+ 
Sbjct: 263 AAQRQEPQLVLAYAEQLRQVGAQGEAEQVLRGALKRAYESHLARLYGLVRGDDPARQLQT 322

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           A    + + +    L+ + +++L+     +A      ++++    E    LA++     
Sbjct: 323 AEGWLKEHPQDPSLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARLLAGLG 381


>gi|117924934|ref|YP_865551.1| hypothetical protein Mmc1_1636 [Magnetococcus sp. MC-1]
 gi|117608690|gb|ABK44145.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 968

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 83/271 (30%), Gaps = 33/271 (12%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               L + Q  L + Q   A    + +L        A   +       G    A  +  +
Sbjct: 4   PAAQLSQAQAYLQQGQLQQAINSYQNLLAQHPESVAAWQGIGSALLAAGQPLQAVDFFER 63

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLEN 236
           AL + P       A+   Y       RA+    +  +   N    + N  ++L A+    
Sbjct: 64  ALALDPQHYPSILALGTLYQQQGRLERAVQLFLRGAQLQPNQPLVHFNLGVVLAAQGRTE 123

Query: 237 ADKGDMIASYHD---------------------------AIESLKLCDNSIMASICAAKS 269
             +     +                                ++L+   +   A    A +
Sbjct: 124 QAQSAYRKALALNENIPEAWLNLGNLLSRTGELQQALVCYQQALQRRPSFTQAGFGLANT 183

Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVE 326
           L +  +  +A  ILE + + NP H E+  +Y HLL         R    R+         
Sbjct: 184 LTTLKRHTEALTILEPLCQQNPDHAEMMILYGHLLRSQNRQHQARSVFQRILAQQPNHFA 243

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +    + I L++G  D A  +   A ++ P 
Sbjct: 244 ARYGYATILLDLGRADLALPQMQQAARLNPS 274


>gi|62182406|ref|YP_218823.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62130039|gb|AAX67742.1| HemY [Salmonella enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
          Length = 399

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTHGWFAGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|300690778|ref|YP_003751773.1| protoheme IX synthesis protein (hemY) [Ralstonia solanacearum
           PSI07]
 gi|299077838|emb|CBJ50476.1| putative protoheme IX synthesis protein (hemY) [Ralstonia
           solanacearum PSI07]
          Length = 397

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/400 (13%), Positives = 117/400 (29%), Gaps = 18/400 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S   +L+ L     A  LL  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLAALLLVFVAAHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    +   AL   + S+ A     A ++              
Sbjct: 61  LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQAWDA--QRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E     A             +  ++  L  ++    D + A     
Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236
           +               ++ +   K W   +      +K     +   A L  +   +L  
Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWDEVLRLTRALEKRNAIHSVLAARLKQMACETLLQ 235

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             + D  A      E       S   +  AA       +   A+ I+E   K +    + 
Sbjct: 236 ERRHDADALNDFWRELTAEERRSPRIASQAALYFAQLGRTDDAKRIVEDALKAHWDGRLI 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +    +  +++A +    +    +    +  +  +     +A +    A+K A
Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLAQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355

Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                   R    L LAQ+ +      +   ++ QSAL A
Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRQEESQRHYRQSALLA 395


>gi|161617050|ref|YP_001591015.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167553886|ref|ZP_02347630.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|168233863|ref|ZP_02658921.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168244623|ref|ZP_02669555.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168263176|ref|ZP_02685149.1| HemY protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|194449801|ref|YP_002047951.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194470481|ref|ZP_03076465.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197262064|ref|ZP_03162138.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|200388970|ref|ZP_03215582.1| HemY protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|238912941|ref|ZP_04656778.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|161366414|gb|ABX70182.1| hypothetical protein SPAB_04883 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408105|gb|ACF68324.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194456845|gb|EDX45684.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197240319|gb|EDY22939.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|199606068|gb|EDZ04613.1| HemY protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205321801|gb|EDZ09640.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205332086|gb|EDZ18850.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205336525|gb|EDZ23289.1| HemY protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205348199|gb|EDZ34830.1| HemY protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
          Length = 399

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 373 DRLHQPEEAA 382


>gi|326629634|gb|EGE35977.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 399

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/376 (14%), Positives = 111/376 (29%), Gaps = 21/376 (5%)

Query: 15  ICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFH 74
           I    +++ +   V I   N    TS   +  IL   +     +  + R      A    
Sbjct: 16  IVGGPMIAGHQGYVLIQTDNYNIETSVTGLAIILIVAIVVLFAIEWLLRRLFRTGAHTRG 75

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
               R   +  K     L+ +A  +     K+ S  +         + YLL  + A    
Sbjct: 76  WFAGRKRRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRG 133

Query: 135 QYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
               +++ LE   +        +  TR               + ++A+    K L+++P 
Sbjct: 134 DEARSNQHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPR 186

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS- 245
            P V     Q Y+    WS  +  +    K       +RA+L     +   D+       
Sbjct: 187 HPEVLRLAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGS 246

Query: 246 ---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                      +   + +   +  A+ LI  +    A+ I+    K      +      L
Sbjct: 247 EGLRTWWKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRL 306

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            + N     K   +  +   +       + +  ++ G   +A      A+K  P    + 
Sbjct: 307 RTNNPEQLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYA 366

Query: 363 LLAQIEQANSHNTDKI 378
            LA          +  
Sbjct: 367 WLADALDRLHQPEEAA 382


>gi|310766126|gb|ADP11076.1| putative protoheme IX biogenesis protein [Erwinia sp. Ejp617]
          Length = 396

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 23/371 (6%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  +L   L   + +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTNNWNIETSVTGMTIVLLLSLVIVLAVEWLLRRVFRTGARTRGWFTGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
                K  +  L+ +A  +     K+              + YLL  + A        A+
Sbjct: 81  RRSARKQTHAALVKLAEGDYKQVEKL--LSRHADHAEQPMVNYLLAAEAAQQRGDETRAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    + L+I+P  P V  
Sbjct: 139 QHLERASELNDDDPLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247
              Q YV  + W   +  L    K +     +R    +   L   S   AD+G       
Sbjct: 192 LAEQAYVRTQAWGALLNILPAMEKIQPGDATHRLELQQQCWLGLMSQAMADQGSDGLKRW 251

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
              +S K   N     +  A  LI  +    A+ I+ +  K +    +  +   L + N 
Sbjct: 252 WQNQSRKTR-NETALQVAMADHLIVCDDHDTAQKIVLEGLKRHFDERLVMLMPRLKTGNP 310

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               K   +  + +  +      + ++ ++ G  + +      A++  P    +  LA  
Sbjct: 311 EQLEKALRQQIKQHGATPLLHSTLGQLLMQHGEWELSSEAFRAALQQRPDAFDYAWLADT 370

Query: 368 EQANSHNTDKI 378
                   +  
Sbjct: 371 LDRQHKPEEAA 381


>gi|261345252|ref|ZP_05972896.1| protein HemY [Providencia rustigianii DSM 4541]
 gi|282566950|gb|EFB72485.1| protein HemY [Providencia rustigianii DSM 4541]
          Length = 399

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 115/391 (29%), Gaps = 21/391 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+++   F V+   +    +++ +   V I   +    TS   ++       F  + L  
Sbjct: 1   MIKVFILFIVLIAGVILGPLLAGHQGYVFIRTDDYDITTSVTSLVLCFILLQFVLLFLGW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R F+S  +     L    Y K +      L+ +A  ++    K+ S            
Sbjct: 61  CYRRFMSTTSRTKGWLTGHKYHKAHTQTQKALLKLAEGDLEQVEKLMS--KHADYSQQPV 118

Query: 121 LVYLLEVQIALAERQY--------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           + YL+  + A                A       L +  +R              G++ +
Sbjct: 119 INYLMAAEAAQQRGDSYRTHQYLDRAAEAAGRDQLPVDISRV-------RIQLAEGEIYA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    + L+ +P  P +     Q Y+ +  +   I  L    K          +L +  
Sbjct: 172 ARNGIDRLLEQAPRHPAILRLAEQAYLSSGAYQALIELLPIMAKVQLHSEDELELLKLKA 231

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSI----MASICAAKSLISQNKKRKAEVILEKIWK 288
                ++    +      +  K     +          A+ LI       AE I+    K
Sbjct: 232 YKGLMNQFMAESGSDGLKKWWKNQPRKVRHEIPLQAFLAEHLIECGDTVSAEKIIVDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +  +   L SE      K  L L +    +      + +IAL+    ++A +  
Sbjct: 292 QQYDERLLLLVPKLNSEQPEVIEKILLGLVKHAGATALLNSTLGQIALQHAQWEKAESYF 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             A+           LA          +   
Sbjct: 352 KAALAQRFDAYDAAWLADAYDKLHKPNEAAK 382


>gi|205354500|ref|YP_002228301.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205274281|emb|CAR39301.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
          Length = 383

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 6   IAGHQGYVLIQTDNYNIETSVTGLAIILIVAIVVLFAIEWLLRRLFRTGAHTRGWFAGRK 65

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        ++
Sbjct: 66  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARSN 123

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 124 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 176

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 177 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 236

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   + +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 237 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 296

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 297 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 356

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 357 DRLHQPEEAA 366


>gi|297200375|ref|ZP_06917772.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197709493|gb|EDY53527.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 1082

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 112/301 (37%), Gaps = 24/301 (7%)

Query: 110 VSQQHTFHNEYL-------VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
            +         L        ++L  +     ++Y  A E+ +  +++   +  A Y    
Sbjct: 511 AAADLLLARPGLDPAGRAEAHVLRGRELRRRQEYGQALEEYDRAVELDPLQPLAHYGRGL 570

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
               + D  +A     +A++++PD  W+     + + LA    +A+    +         
Sbjct: 571 THQLLEDYPAALTALDRAVELAPDNGWIIAERAETHRLASHLEQAVVDYTRAVALDPT-- 628

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               + L  R++     G +  S  D   +L +    + A +  A+   ++    KA   
Sbjct: 629 --DDVALAGRAVCRHGLGMLDESLADFNRALSIDPEYLWALVRRARLHRARGDVDKAFAD 686

Query: 283 LEKIWKVNPHPEIA-------NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           L++ +++   P++A       + Y      E  V +L RA+ LE        +L    + 
Sbjct: 687 LDRAYELA--PDLAWIASERGDAYRIAGRYEEAVTELGRAVSLE---PGYASALASRGQA 741

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
             E+G  D+A A    A+++ P     L++    +    + +  L   + A+ A P   W
Sbjct: 742 LYELGRYDEASAAFDGAVRLIPDYAWALVMRSRARRRLDDEEGALADLRRAVEAEPGVDW 801

Query: 395 I 395
           I
Sbjct: 802 I 802



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 80/234 (34%), Gaps = 37/234 (15%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                 GD++ A     +A +++PD  W+       Y +A  +  A+T L +       +
Sbjct: 672 RLHRARGDVDKAFADLDRAYELAPDLAWIASERGDAYRIAGRYEEAVTELGRAVSLEPGY 731

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A  L +R     + G    +      +++L  +   A +  +++    + +  A  
Sbjct: 732 ----ASALASRGQALYELGRYDEASAAFDGAVRLIPDYAWALVMRSRARRRLDDEEGALA 787

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L +  +  P                               + +E  + +++        
Sbjct: 788 DLRRAVEAEP-----------------------------GVDWIECELGLAQQ--GAHRF 816

Query: 342 DQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
            +A A     +   P  +I L  LA I Q   ++ ++ L++   A+ A P+  W
Sbjct: 817 AEAEASFHRVLSRDPDYKIALAGLAAIVQT-RNSYEEALHYLDRAVTADPEFAW 869



 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 40/149 (26%), Gaps = 17/149 (11%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY---------------NIAHEKL 143
           +   A  M S   ++       L  L     A     +                 A    
Sbjct: 764 DYAWALVMRSRARRRLDDEEGALADLRRAVEAEPGVDWIECELGLAQQGAHRFAEAEASF 823

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +L      + A+  L            A  Y  +A+   P+  W      +  +    
Sbjct: 824 HRVLSRDPDYKIALAGLAAIVQTRNSYEEALHYLDRAVTADPEFAWAYGERARVCLAIGR 883

Query: 204 WSRAITFLNQ--KKKNAKEWNRNRAILLI 230
            ++A+  L++  +        R  A+ L+
Sbjct: 884 TAQALADLDRCVELDPGTTRERAEAVRLL 912


>gi|53718659|ref|YP_107645.1| putative porphyrin biosynthesis related protein [Burkholderia
           pseudomallei K96243]
 gi|76810797|ref|YP_332643.1| putative porphyrin biosynthesis related protein [Burkholderia
           pseudomallei 1710b]
 gi|126451474|ref|YP_001065359.1| putative hemY protein [Burkholderia pseudomallei 1106a]
 gi|134281025|ref|ZP_01767734.1| putative hemY protein [Burkholderia pseudomallei 305]
 gi|167737629|ref|ZP_02410403.1| hypothetical protein Bpse14_06160 [Burkholderia pseudomallei 14]
 gi|167814762|ref|ZP_02446442.1| hypothetical protein Bpse9_06442 [Burkholderia pseudomallei 91]
 gi|167823217|ref|ZP_02454688.1| hypothetical protein Bpseu9_06038 [Burkholderia pseudomallei 9]
 gi|167844778|ref|ZP_02470286.1| hypothetical protein BpseB_05763 [Burkholderia pseudomallei B7210]
 gi|167900344|ref|ZP_02487745.1| hypothetical protein Bpse7_41885 [Burkholderia pseudomallei 7894]
 gi|167901769|ref|ZP_02488974.1| hypothetical protein BpseN_05780 [Burkholderia pseudomallei NCTC
           13177]
 gi|167918041|ref|ZP_02505132.1| hypothetical protein BpseBC_05768 [Burkholderia pseudomallei
           BCC215]
 gi|226194427|ref|ZP_03790025.1| putative hemY protein [Burkholderia pseudomallei Pakistan 9]
 gi|242315632|ref|ZP_04814648.1| putative hemY protein [Burkholderia pseudomallei 1106b]
 gi|254190783|ref|ZP_04897290.1| putative hemY protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254196511|ref|ZP_04902935.1| putative hemY protein [Burkholderia pseudomallei S13]
 gi|254259359|ref|ZP_04950413.1| putative hemY protein [Burkholderia pseudomallei 1710a]
 gi|254298290|ref|ZP_04965742.1| putative hemY protein [Burkholderia pseudomallei 406e]
 gi|52209073|emb|CAH35013.1| putative porphyrin biosynthesis related protein [Burkholderia
           pseudomallei K96243]
 gi|76580250|gb|ABA49725.1| putative porphyrin biosynthesis related protein [Burkholderia
           pseudomallei 1710b]
 gi|126225116|gb|ABN88656.1| putative hemY protein [Burkholderia pseudomallei 1106a]
 gi|134247331|gb|EBA47416.1| putative hemY protein [Burkholderia pseudomallei 305]
 gi|157808151|gb|EDO85321.1| putative hemY protein [Burkholderia pseudomallei 406e]
 gi|157938458|gb|EDO94128.1| putative hemY protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169653254|gb|EDS85947.1| putative hemY protein [Burkholderia pseudomallei S13]
 gi|225933512|gb|EEH29501.1| putative hemY protein [Burkholderia pseudomallei Pakistan 9]
 gi|242138871|gb|EES25273.1| putative hemY protein [Burkholderia pseudomallei 1106b]
 gi|254218048|gb|EET07432.1| putative hemY protein [Burkholderia pseudomallei 1710a]
          Length = 396

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 123/398 (30%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S    +  +         L  
Sbjct: 3   LRGIIWLAVLFAIAAALATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   ++   AL   L ++ A     A K            +  
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRAEKAARDALAVDANQSAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
            +       A A  + +    + E + ++          L     R    D   A     
Sbjct: 123 SLV-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K W+  +    +  +  +  +   A+ L  ++ E+  
Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236

Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D   ++  +     + +        +  AA+ LI+  ++++A  I+E     N +
Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A        +  + L  + ++  +     +A +    A+
Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +          ++ +SAL
Sbjct: 354 KLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391


>gi|269925204|ref|YP_003321827.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
            BAA-798]
 gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
            BAA-798]
          Length = 2240

 Score = 68.4 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 92/238 (38%), Gaps = 13/238 (5%)

Query: 131  LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                +++ A++  +  + +        Y+L       GDL+ A    +KA+DI P+    
Sbjct: 1392 QDMGRFDDAYDLFQRSISLSPDNPRYHYNLGILMRSQGDLHDAINQVSKAIDIQPNNAEW 1451

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y       +A     +  + +   +  +R + +IAR     +  D+  +   A
Sbjct: 1452 HSTLADLYFQIGMLDKARKEAEEASRLDPDNYRYHRQLSVIAR-----ETQDLDQALASA 1506

Query: 250  IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304
             ++LK   +   A    A    +  +   A  + ++   ++P     H +I +IY  L  
Sbjct: 1507 RQALKCAPDEPQAIAELASVQEALGELTSALALYKQAAMLDPLNADYHRKIGSIYRQL-- 1564

Query: 305  ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
              T   L+   +  ++   + +SL  + ++ L+    D+A      A ++AP    + 
Sbjct: 1565 GKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDEACKVLQKATQLAPDNPTYR 1622



 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 54/306 (17%)

Query: 129  IALAERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISP 185
                   ++ A    E  LQI       +  L   Y +  R  D   A     KA +I P
Sbjct: 1748 TYNMVGNHSEALINYERALQIRPDDGLTLRRLGSTYRQMKRFKD---AISILQKAAEIDP 1804

Query: 186  DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILL-----IARSLENA 237
              P +   +   Y    +   A+       K   +   +NRN AI          ++E  
Sbjct: 1805 QDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRNAAIAHQDLKQTKLAIEKL 1864

Query: 238  DKG----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                                         +  +  E+++L  +  + +  AA+      K
Sbjct: 1865 QHAVMLEPYQPTWHFELGALLEASEQYEEALAEYNEAMQLNPDGAIYAFRAAEVCERMGK 1924

Query: 276  KRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEE---INKESVES 327
            K +A   L+   K+ P       ++  +Y  +           A  L +   I  ES E+
Sbjct: 1925 KEEAIECLKYALKLEPRNYEWRFKLGCMYLDMEYFAPA-----AEELAKSLEIEPESAEA 1979

Query: 328  LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQIEQANSHNTDKILYWT 382
             + +    + +   DQA  + M A KI P      +++ L++ ++ +     +       
Sbjct: 1980 HLKLGIALINLEQYDQALERLMDAAKIEPNNFDVHEQLSLVMEKLGRPEEAISHIAQALL 2039

Query: 383  QSALHA 388
              +  A
Sbjct: 2040 LDSSRA 2045



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 84/240 (35%), Gaps = 14/240 (5%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AE +Y +A ++ E+ ++   +         L    C   DL +A +       +  D  
Sbjct: 507 EAEGKYELACQQYELAVERDPSNVNYRRSFGLALALCNKYDLAAA-KLREVVDILKSDCA 565

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   Y +     +A+       ++A   + + A+ L +     A  GD   +  +
Sbjct: 566 LTQHELGNIYKIQGRLQQALEQF----QDAATMSPSSAVYLTSLGSVLAACGDDQGAERE 621

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLL 303
              +L L  N   A+   A  L  Q K   A    +K  ++ P     H     I   L 
Sbjct: 622 LRRALDLDPNYAPAANELAAVLERQGKLDLALANYQKATEIQPEEPLYHRNAGAILRKLG 681

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 +    +   E++ +  ++   +  + ++MG    A      A++ +P +  + L
Sbjct: 682 RVEEAER--ELVTAIELDSKYADAYNELGSLYMDMGKHLAALENFQKAIQYSPEQPEYYL 739



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 41/194 (21%)

Query: 205  SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
              AI  L +    A +  R    +  A +LE A  G    +  +  E+++L D ++   +
Sbjct: 1092 EDAIKTLERAL--ALDPRRADVYVTYAEALEIA--GKRDEAIQNLQEAVRLDDTNVSYKV 1147

Query: 265  CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK--------- 310
                 L    + + AE +L K    +P     H E+  +Y  L  +    +         
Sbjct: 1148 KLGSMLRRYGEYQDAEDLLLKCTDDHPESAQAHSELGMLYMDLGLQEKALRHHEIACSLD 1207

Query: 311  ----------------LKRALR-----LEEI--NKESVESLVIVSKIALEMGSIDQAHAK 347
                            LKR        L  I  N E+ E    + +  + +   ++A   
Sbjct: 1208 DRSPEYKYRMALALIHLKRYAEAIDTILTAIQANPEAAEYYHALGRAHMGLSQYEEAVQA 1267

Query: 348  AMLAMKIAPRKEIF 361
               A++IAP    +
Sbjct: 1268 FEKAVRIAPSVAQY 1281



 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 83/271 (30%), Gaps = 34/271 (12%)

Query: 148  QIPATREFAVYSL--YFESCRIGDLNSAQRYA--------------TKALDISPDAPWVT 191
              P  R    Y L       R   L SA+  A                AL I  +     
Sbjct: 1617 DNPTYRF--HYGLAIMRLKEREDKLRSARLLASSSQVSYAQAIEEIEAALRIEHNHADWH 1674

Query: 192  EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
              + + Y L  ++  A+       + A + + + A+    +        D   +      
Sbjct: 1675 NTLGELYELVDDYESALHHF----RWAADIDSDCALFQYNQGRIYKKLRDYDRAIRAFQM 1730

Query: 252  SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
            +++L      A      +        +A +  E+  ++   P+       L   +T  ++
Sbjct: 1731 AVRLDPEFAQAYSELGATYNMVGNHSEALINYERALQIR--PDDGLTLRRL--GSTYRQM 1786

Query: 312  KRAL-------RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            KR         +  EI+ +  E    +       G   +A A+   A+K+ P    +   
Sbjct: 1787 KRFKDAISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRN 1846

Query: 365  AQIEQANSHNTDKILYWTQSALHAMP-DPLW 394
            A I   +   T   +   Q A+   P  P W
Sbjct: 1847 AAIAHQDLKQTKLAIEKLQHAVMLEPYQPTW 1877



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 88/314 (28%), Gaps = 63/314 (20%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMM 146
            G+++    +  LA  +  Y        +     +   + A        A     +    M
Sbjct: 844  GMVAEQKGDYILA--LERYRKALELSPDNEHFIVAVSRSARLSGNLLQADELIRDAFSRM 901

Query: 147  LQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKE 203
             +      E        E  R G+   A     KA  +SP+    W       +Y+   +
Sbjct: 902  PESALIHDELGT----IEFVR-GNYQKASECFLKATKLSPETSDFWAHLGKAYRYLTRLD 956

Query: 204  WSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
               A     +  +   N    +   A+LLIA         +   +     ++ +L   + 
Sbjct: 957  --EAKEACEEALRLDANNPVAHHETAMLLIAL-------NEEEEALSHFRKAARLDARNA 1007

Query: 261  MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI----------------- 298
              ++          +  +    LEK   ++P     H E+  +                 
Sbjct: 1008 QYALDLGACASKLGRVNEGLTWLEKALSLDPNNGQAHAELGMLMGSRGQWEEALAHFRAS 1067

Query: 299  ---------YTHLLS------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                     Y H+        + T   +K   R   ++    +  V  ++     G  D+
Sbjct: 1068 LLIDEQNVDYLHMYGIACLHTDATEDAIKTLERALALDPRRADVYVTYAEALEIAGKRDE 1127

Query: 344  AHAKAMLAMKIAPR 357
            A      A+++   
Sbjct: 1128 AIQNLQEAVRLDDT 1141



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 93/288 (32%), Gaps = 52/288 (18%)

Query: 123  YLLEVQIALA-ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YLL   I          A E L+ ++Q       A + L   + + GD   A     KAL
Sbjct: 805  YLLNAAIVQRKAGMLEDAEESLKKVIQNNPGLAPAYFELGMVAEQKGDYILALERYRKAL 864

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++SPD      AV +   L+    +A   +        E     A++          +G+
Sbjct: 865  ELSPDNEHFIVAVSRSARLSGNLLQADELIRDAFSRMPES----ALIHDELGTIEFVRGN 920

Query: 242  MIASYHDAIESLKLCD---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
               +    +++ KL     +                            W       +   
Sbjct: 921  YQKASECFLKATKLSPETSDF---------------------------WAH-----LGKA 948

Query: 299  YTHLLS-ENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            Y +L   +      + ALRL+  N     E+ +++    + +   ++A +    A ++  
Sbjct: 949  YRYLTRLDEAKEACEEALRLDANNPVAHHETAMLL----IALNEEEEALSHFRKAARLDA 1004

Query: 357  RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV 404
            R   + L      +     ++ L W + AL    DP    ++G   + 
Sbjct: 1005 RNAQYALDLGACASKLGRVNEGLTWLEKALS--LDP----NNGQAHAE 1046


>gi|37528464|ref|NP_931809.1| putative protoheme IX biogenesis protein [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36787902|emb|CAE17019.1| HemY protein [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 412

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 111/371 (29%), Gaps = 21/371 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  I         L     R  +   +        R 
Sbjct: 21  IAGHQGYVLIQTDNYNIETSVTGLFIIFVLLQLVLCLFGWCYRRVIRTGSRTRGWFLGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             + +      L+ +A  +     ++ +  +         + YLL  + A         +
Sbjct: 81  RSRAHAQTKAALLKLAEGDFKQVEQLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR              G++++A+    K L+ +   P V  
Sbjct: 139 QYLERAAEVADNNQLPVDITRV-------RIQLTQGEIHAARHGVDKLLNQASRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              Q Y+ +  +   I  L   +K    +  + ++ R    I    +   +         
Sbjct: 192 LAEQAYMKSGAYQSLIDILPVMEKIHLHDELQIHKLRQQAYIGLMNQYMAEQGSEGLKRW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             +  +   + +   +  ++ LI  +    A+ I+ +  K      +  +   L SE+  
Sbjct: 252 WHDQSRKIRHDVALQVAISEHLIECDDHETAQKIILESLKRQYDERLLLLIPRLKSEDPK 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
                     + +  +      + ++AL  G  ++A      A+   P    +  LA   
Sbjct: 312 PIQNALDHQLKQHGSTPLLNSTLGQVALRHGEWEKAVKDFKTALAQRPDAHDYAWLADAL 371

Query: 369 QANSHNTDKIL 379
                  +   
Sbjct: 372 DKLRKPEEAAQ 382


>gi|241663750|ref|YP_002982110.1| HemY domain-containing protein [Ralstonia pickettii 12D]
 gi|240865777|gb|ACS63438.1| HemY domain protein [Ralstonia pickettii 12D]
          Length = 397

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/365 (11%), Positives = 101/365 (27%), Gaps = 21/365 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S   +L+ L        L+  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLFYPPYRVEMSLNFVLAALLATFVVLHLVMR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    K   AL   + S+ A     A +               
Sbjct: 61  LFHHVAGMPARAAAYRERNRILKASAALREAMESLFAGRFGHAERQAREAQA--WEPQRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E +   A             +  ++  L  ++    D   A     
Sbjct: 119 TAALIGARAAHRMQETERRDAWMAEVASPDREQAKLVSMAELLVDAR---DAEGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +               ++ +   K W   +      +K     +     +L AR  + A 
Sbjct: 176 QLQSQGSRQIQAQRIALRAHQHLKNWGEVLRLTRALEKRNAIHS-----VLAARLKQMAC 230

Query: 239 KGDMIASYHDAIESLKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +  +    HDA                    +  AA       +   A+ I+E   K + 
Sbjct: 231 ETLLAERRHDADALNSFWRELTPEERRSPRIASQAALYFAQLGRTDDAKRIVEDGLKAHW 290

Query: 292 HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              +   Y    +    +  +++A +    +    +    +  +  +     +A +    
Sbjct: 291 DGRLIRRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLES 350

Query: 351 AMKIA 355
           A+K A
Sbjct: 351 ALKYA 355


>gi|254181384|ref|ZP_04887981.1| putative hemY protein [Burkholderia pseudomallei 1655]
 gi|184211922|gb|EDU08965.1| putative hemY protein [Burkholderia pseudomallei 1655]
          Length = 396

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 122/398 (30%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +      V       V I +       S    +  +         L  
Sbjct: 3   LRGIIWLAVLFAIAAVLATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   ++   AL   L ++ A     A K            +  
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRAEKAARDALAVDANQSAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
            +       A A  + +    + E + ++          L     R    D   A     
Sbjct: 123 SLV-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K W+  +    +  +  +  +   A+ L  ++ E+  
Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236

Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D   ++  +     + +        +  AA+ LI+  ++++A  I+E     N +
Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A        +  + L  + ++  +     +A +    A+
Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +          ++ +SAL
Sbjct: 354 KLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391


>gi|329297025|ref|ZP_08254361.1| putative protoheme IX biogenesis protein [Plautia stali symbiont]
          Length = 398

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 107/371 (28%), Gaps = 21/371 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           V+ +   V I   N    TS   +  IL   L   +L+  +        A        R 
Sbjct: 21  VAGHQGYVLIQTDNWNIETSVTGLAIILILSLLVILLVEWILPRLFRTGARTRDWFTGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
                +   + LM +A  +     K+ S  +           YLL  + A        A+
Sbjct: 81  RRSAQRHTQSALMKLAEGDYRHVEKLLSKNADHA--DQPVANYLLAAEAAQQRGDEIRAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    + L+++P  P V  
Sbjct: 139 QHLERAAELSENDTIPVEITRV-------RLQLARNEDHAARHGIDRLLEVAPRHPEVLH 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH----D 248
              Q Y+    W   +  L   +K        R  L     L   ++             
Sbjct: 192 LAEQAYIRTGAWGALLDILPSMQKAQINDENQRNALQQQAWLGLMNQAMADQGSEGLKKW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +         +  A+ LI  +    A+ I+ +  K      +  +   + S +  
Sbjct: 252 WQNQSRKTRQETALQVAMAEHLIECDDPDTAQSIVLEGLKRQYDDRLVLLMPRIKSGDPQ 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  + +  +      + ++ +  G   QA      A+   P    +  LA + 
Sbjct: 312 ALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAAEAFQQALAQRPDGFDYAWLADVY 371

Query: 369 QANSHNTDKIL 379
                  D   
Sbjct: 372 DRLHRPEDAAK 382


>gi|148654849|ref|YP_001275054.1| hypothetical protein RoseRS_0687 [Roseiflexus sp. RS-1]
 gi|148566959|gb|ABQ89104.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 2262

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 89/259 (34%), Gaps = 12/259 (4%)

Query: 104  RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
                +Y        +       + ++ + + +   A +  E  ++    +    Y L   
Sbjct: 1915 AARSAYARAIQLAPDNADYRHAQARLLIRQGRTAEARQVFEEAVKREPHQGAWRYELAEL 1974

Query: 164  SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              + GDL + + YA  A+ ++PD P     +V+  +   E   A   + +      +   
Sbjct: 1975 LRQQGDLTAIEHYAA-AVQLAPDEPRHWLGLVEGLIARHERDAARETVERALLRFGD--- 2030

Query: 224  NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                L  A       +GD+  +      + +    +        ++ +   +   A  +L
Sbjct: 2031 -NPALHSAAGAIYEAQGDIERAAWHYGRAFERDPQNAGNCWRFGRAQLELGRLDAARELL 2089

Query: 284  EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            E+   ++P     H  IA  + H  + ++   L  + R  E+  +     + +++    +
Sbjct: 2090 ERALALDPDSADAHAAIARFFAH--TNDSRAALIHSQRAAELRPDEPAFQIQLAEALTHL 2147

Query: 339  GSIDQAHAKAMLAMKIAPR 357
               D+A      A++  P 
Sbjct: 2148 RRFDEARQALERALQRIPD 2166



 Score = 43.8 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 79/267 (29%), Gaps = 19/267 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF 155
             N   A +    +  Q   ++  L  LL           + A   L   +   P + E 
Sbjct: 711 TGNALAAYRAAVSLDPQCDAYHRRLGALLR-----DCGDDDGAAAALRTALELRPDSAET 765

Query: 156 AVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             Y    E   R G+   A     +A  ++P +P    A+   Y        A   L   
Sbjct: 766 --YGELAELLWRSGESEKALDACRRAYALAPTSPDHARALGLAYHRVGRARDAERTLRDA 823

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
              A +    RA L     +         A+      +  L       +  A   L+ + 
Sbjct: 824 LALAPD----RADLHFDYGMVAESIEQWDAALAAYERAAMLAPQRADYARAAGALLLRRG 879

Query: 275 KKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVI 330
           + ++A  +L    +     P         H+ +       +   R   ++  +  ES   
Sbjct: 880 ELKRARTLLAGALRRARRDPETLFQTGLLHVAAGAWHLAARSFQRAVRLSGGARYES--A 937

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + +  L +G  + A A    A+   P 
Sbjct: 938 LGRAYLRLGRAEDACAALERALHTNPD 964



 Score = 43.4 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 81/274 (29%), Gaps = 22/274 (8%)

Query: 84   GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
            G   L  G                + ++            L   +  LA  + + A E L
Sbjct: 1769 GRILLDQG----------ETAAARAELTAALVDPAHVQARLFLGRACLALNEPHPAIEAL 1818

Query: 144  EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            E  +++         +L       G    A   A +A+ +        + +   Y  +  
Sbjct: 1819 EQAVELRPDHAPTAAALSLAYAAAGRRERAIAAAQRAVRLDSSVGAHHQVLATLYAASGR 1878

Query: 204  WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            +  A   L        +     A             G + A+      +++L  ++    
Sbjct: 1879 FQEARAALINALTLQPDV----AAWHAQMGEICQQMGLIDAARSAYARAIQLAPDNADYR 1934

Query: 264  ICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLE 318
               A+ LI Q +  +A  + E+  K  PH      E+A +   L  +  +  ++      
Sbjct: 1935 HAQARLLIRQGRTAEARQVFEEAVKREPHQGAWRYELAEL---LRQQGDLTAIEHYAAAV 1991

Query: 319  EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            ++  +     + + +  +     D A      A+
Sbjct: 1992 QLAPDEPRHWLGLVEGLIARHERDAARETVERAL 2025


>gi|261401612|ref|ZP_05987737.1| HemY family protein [Neisseria lactamica ATCC 23970]
 gi|313668742|ref|YP_004049026.1| HemY protein [Neisseria lactamica ST-640]
 gi|269208317|gb|EEZ74772.1| HemY family protein [Neisseria lactamica ATCC 23970]
 gi|313006204|emb|CBN87666.1| putative HemY protein [Neisseria lactamica 020-06]
          Length = 407

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 120/398 (30%), Gaps = 14/398 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  DV +  G  + R +    +  L   + AW  LF 
Sbjct: 1   MKTVVWIVVLFAAAVGLALASGIYTGDVFVVVGQTMLRINLHAFVLGLLIAVAAWYFLFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
                L+ P  L      R   K   AL    ++        A    S V        N 
Sbjct: 61  FIIGVLNIPEKLRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A       +    L  + ++P  ++ + Y L  E +    D  +A+    
Sbjct: 121 TLALMLGAHAAGQMENTELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ++     +    ++      +  + +    +  K           +   ++     
Sbjct: 181 AAAKMNAGLTRLVRLQLRYAFDRGDVPQVLAKTEKLSKAGALGKSE---MERYQNWAYRR 237

Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
                A        LK   +S+     S+  A+          A   + + +  N  P +
Sbjct: 238 LLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYRRLGLYADAVKWVRQHYPQNRLPGL 297

Query: 296 ANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +   +        ++A+   +       ++   L+ + ++A       +A      +
Sbjct: 298 LEAFVGSVRFLDERGQQKAIDFADAWLQDQPDNALLLMYLGQLAYGRKLWGKAKGYLEAS 357

Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387
           + + P     L+LA++  E   +   +        A+ 
Sbjct: 358 IALKPSIPARLVLAKVFDETGETQKAEAQRNLVLEAVS 395


>gi|307132978|ref|YP_003884994.1| putative protoheme IX synthesis protein [Dickeya dadantii 3937]
 gi|306530507|gb|ADN00438.1| predicted protoheme IX synthesis protein [Dickeya dadantii 3937]
          Length = 398

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 125/387 (32%), Gaps = 13/387 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML++   F V+   I    +++ +   V I   N    TS   ++ +L  FL A++ +  
Sbjct: 1   MLKVFLLFVVLIAGIVVGPMLAGHQGYVLIQTDNYNIETSVTGLVIMLVLFLLAFLAVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R      A        R   +  +     L+ +   +     K+ +  +         
Sbjct: 61  LLRRVFRTGARTRGWFIGRKRTRARQQTKAALLKLTEGDYLQVEKLLTRNADHA--EQPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179
           + YLL  + A          + LE   +I  T +  V  +         + ++A+    +
Sbjct: 119 VNYLLAAEAAQQRGDEFRTRQYLERAAEIADTNQLPVDITRVRIQLARNEDHAARHGVDR 178

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIAR 232
            L+++P  P V     Q ++    +S  +  L   +K       +  E  +   I L+ +
Sbjct: 179 LLEVAPRHPEVLRLAEQAFLRTHAYSALLDILPAMRKTRLHDESHLDELQQRATIGLMDQ 238

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++    +G             +    ++   +  A+ LI  +    A+ I+    K    
Sbjct: 239 AM---AEGGSEGLKQWWKNQPRKVRQALPMQVAMAERLIVCDDHVTAQDIIVDGLKQQFD 295

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +  +   L +       K      + + +       + ++  + G   QA      A+
Sbjct: 296 YRLVQLIPRLNAGQPEPLEKLLRLRLKQHNDDALLHSTLGQLLAKHGEWQQASDAFSAAL 355

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKIL 379
            + P    +   A          D   
Sbjct: 356 ALRPDAYDYAWCADAFDRLKRPEDAAR 382


>gi|188532366|ref|YP_001906163.1| putative protoheme IX biogenesis protein [Erwinia tasmaniensis
           Et1/99]
 gi|188027408|emb|CAO95255.1| Protein HemY [Erwinia tasmaniensis Et1/99]
          Length = 396

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 119/371 (32%), Gaps = 23/371 (6%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ IL   L   + +  + R  L   A        R 
Sbjct: 21  IAGHQGYVLIQTDNWNIETSVTGLVIILLLSLVVILSVEWLLRRMLRTGARTRGWFTGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
                K     L+ +A  +     K+ S+ +         + YLL  + A        A+
Sbjct: 81  RRSARKQTNAALIKLAEGDYKQVEKLLSHHADHA--EQPMVNYLLAAEAAQQRGDEKRAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + +E   +        +  TR               + ++A+    + L+I+P  P V  
Sbjct: 139 QHMERASELNDGDPLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247
              Q Y+  + W   +  L    K +     +R    +   L   S   AD+G       
Sbjct: 192 LAEQAYIRTQAWGALLNVLPAMEKIQLGDAAHRLELQQQCWLGLMSQAMADQGSEGLKRW 251

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
              +S K         +  A  LI  +    A+ I+ +  K +    +  +   L + N 
Sbjct: 252 WQNQSRKTRHE-TTLQVAMADHLIVCDDHDTAQKIVLEGLKRHYDERLVLLMPRLKTGNP 310

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               K   +  + +  +      + ++ ++ G  +QA      A++  P    +  LA  
Sbjct: 311 EQLEKMLRQQIKQHGATPLLHSTLGQLLMKHGEWEQASEAFRAALQQRPDAFDYAWLADT 370

Query: 368 EQANSHNTDKI 378
                   +  
Sbjct: 371 LDRQHKTEEAA 381


>gi|68249301|ref|YP_248413.1| HemY [Haemophilus influenzae 86-028NP]
 gi|145635730|ref|ZP_01791424.1| HemY [Haemophilus influenzae PittAA]
 gi|68057500|gb|AAX87753.1| HemY [Haemophilus influenzae 86-028NP]
 gi|145266994|gb|EDK07004.1| HemY [Haemophilus influenzae PittAA]
          Length = 428

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|328952032|ref|YP_004369366.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
 gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 599

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 108/330 (32%), Gaps = 56/330 (16%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHT-----FHNEYLVYLLEVQIALAERQYNIAHEK 142
           L T L+     ++P A                    E   + L  Q  L       A   
Sbjct: 32  LATALVMSGCQSLPPADSARIPGKIDRLPPTIQSPKEAYKHYLNAQYYLFTGNLEDALRS 91

Query: 143 LEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            E  +Q  P + +  +  +     R GD+  A  +  KA+ + P+     + +   +   
Sbjct: 92  YEAAIQCDPKSAQLEIE-MAALLIRKGDIKEALAHLEKAISLDPNHLEAHQLLAGLHTGM 150

Query: 202 KEWSRA--------------------ITFLNQKK----------KNAKEWNRNRAILLIA 231
            +   A                    +  L+ ++          KN  + N ++ I L  
Sbjct: 151 NQLREATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNLLKNLIKKNPDQFIALFY 210

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VIL---- 283
                 + G + A+  +  ++L      + A +        + +  +A+     IL    
Sbjct: 211 LGKCYIELGQLTAAKKEFQQALHKQPEFLPAMLELGFVYELEKRYSQAKTMYRRILRHDP 270

Query: 284 --EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             ++ W       +  +Y  LL++     L+    ++ I+K   E+ + +  +  E    
Sbjct: 271 DNQRAWAS-----LGRLY--LLNDQYTEALQAFGEIKRISKNEPETALRIGLLFFEQKYF 323

Query: 342 DQAHA--KAMLAMKIAPRKEIFLLLAQIEQ 369
           D A    + +L  +  P +  F L A +E+
Sbjct: 324 DDAIREFREVLISRKGPDQARFFLAAALEE 353



 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 48/301 (15%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A+K       +       ++ L    +   E++Y+ A      +L+     + A 
Sbjct: 219 GQLTAAKKEFQQALHKQPEFLPAMLEL--GFVYELEKRYSQAKTMYRRILRHDPDNQRAW 276

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            SL            A +   +   IS + P     +   +   K +  AI    +   +
Sbjct: 277 ASLGRLYLLNDQYTEALQAFGEIKRISKNEPETALRIGLLFFEQKYFDDAIREFREVLIS 336

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            K  ++ R  L    +    +KGD++A+  +  +  +  ++ I A +  A  L  Q K  
Sbjct: 337 RKGPDQARFFL----AAALEEKGDLVAAMREYEQISRQSESYIPARLRMAYILGRQKKIS 392

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRL------------------ 317
           +   I++    +   P+  ++Y  L +  E     +K    L                  
Sbjct: 393 QGIKIIKDSLVLF--PKNGDLYLTLAAFYEEEQEYVKAIETLNQALENTVNPSEVYFRLA 450

Query: 318 --EEINKESVESLVIV----------SKI--------ALEMGSIDQAHAKAMLAMKIAPR 357
              +  KE+ ES  ++          ++         A +  ++D+A      A+ I P 
Sbjct: 451 VVYDKKKENAESQRLIKKVLELEPNNAEALNFLGYMYACQGANLDEAERLIQTALAIKPD 510

Query: 358 K 358
            
Sbjct: 511 A 511


>gi|315185805|gb|EFU19571.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 654

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 78/233 (33%), Gaps = 7/233 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A  +  Y+ A E  +  +Q       A   L      +G    A   A KA  + P +  
Sbjct: 32  ARIQEDYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTD 91

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++    L       +    +  ++            +  +  +  +G + ++  + 
Sbjct: 92  SH--LLYARCLLA--LGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREY 147

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSEN 306
             +L++           A     + ++ KA   LE+    +  +P   +    +HL  E 
Sbjct: 148 ERTLRMFPEHKKILTILAFLYEYRGERDKAASYLEEALRLYPSDPEVHLLAASSHLRKEE 207

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                + A R   +++ +VE+  +++++A   G   +A       +   P   
Sbjct: 208 WDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDGFLGARPDSR 260



 Score = 60.7 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 103/310 (33%), Gaps = 24/310 (7%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           + YK L     S+  + + LA    +      +       +LL  +  LA  +   A   
Sbjct: 57  QAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTD----SHLLYARCLLALGRLEEAERI 112

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
              +L        A   +   S   G + SA R   + L + P+   +   +   Y    
Sbjct: 113 YRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRG 172

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           E  +A ++L +  +       +   + +  +  +  K +   +  +A  +L L +N++ A
Sbjct: 173 ERDKAASYLEEALRLYP----SDPEVHLLAASSHLRKEEWDEAEREARRALTLDENAVEA 228

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-IYTHLLSENTVGK----LKRALRL 317
           S   A+    + + ++A   L+        P+     Y   +  + + +    L+    +
Sbjct: 229 SYLLAQVATGKGRFQEALDHLDGFLGAR--PDSREGWYLKGVVLDRLDRPEESLRAFREV 286

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            E   +   +   + +I LE      +  +   A      +         E A      +
Sbjct: 287 LERYPDDEVARYAMERILLE--RFPASAPERRTAADYHFTQAG-------EYAEKFYFQR 337

Query: 378 ILYWTQSALH 387
             ++ +  L 
Sbjct: 338 AYHFLRRGLR 347


>gi|148825498|ref|YP_001290251.1| heme biosynthesis protein HemY [Haemophilus influenzae PittEE]
 gi|148715658|gb|ABQ97868.1| HemY [Haemophilus influenzae PittEE]
          Length = 428

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|145637763|ref|ZP_01793414.1| HemY [Haemophilus influenzae PittHH]
 gi|145269061|gb|EDK09013.1| HemY [Haemophilus influenzae PittHH]
          Length = 428

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLALLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQTLDK 208


>gi|114332038|ref|YP_748260.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
 gi|114309052|gb|ABI60295.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
          Length = 930

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 92/294 (31%), Gaps = 42/294 (14%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                  +  ++ L  +  +  R +  A E  E   ++         ++       G+  
Sbjct: 367 ALKVVQQDPQLFALAGEAYMRARDFTKATEYFEKAGELSPDNVALYTAMAMSKMGQGENE 426

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           SA      A  +   +      +V  ++  +E+ +A+  +  +     +      +L   
Sbjct: 427 SAIADLEHATQLDDKSGRAGIMLVLTHLQQREFDKALKVVKSQLAEQPD----NPLLHNL 482

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---------------------- 269
                  K D+I +     ++L +  +   A    A+                       
Sbjct: 483 EGGVYLGKKDLIKARASFNQALSIQPDYFPAISNLARIDLQEKHPEAAQQRFEEVLKQDK 542

Query: 270 ------------LISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRA 314
                        +SQ  K KA   LEK  + NP    P +     +L        L  A
Sbjct: 543 KNVQAMNALAGIALSQGNKEKATEWLEKASQENPDELPPALQLGAHYLAINEPGKSLALA 602

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367
            +L+ I+ +++ ++ ++++  L  G  D A           P      L LAQI
Sbjct: 603 KKLQGIHPDNLSAIELLARAYLATGDKDAALENFQKLAARLPDSAPAQLQLAQI 656



 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 92/288 (31%), Gaps = 34/288 (11%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L    +LA  +   A    E  L+       A+  +   S    D+ SA  ++ +A+ ++
Sbjct: 142 LRGNASLALGKIEEAKALFEQALRDKPGFAGALMGMARCSLARNDIESAMNFSEEAVKLN 201

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIA---------- 231
           P+                +   A+   ++  K   E      NRA +LI+          
Sbjct: 202 PENSDTVLFRGDLLRAQNKIDEALADYDKAIKLNPESLAAYINRATILISTKKFKAAQAD 261

Query: 232 -----------------RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                            ++L +  +G  + +     + L    + + + + A  +  +  
Sbjct: 262 LDAVRKIAPGSLPAAYTQALLDFSQGKHVVALETLQQVLSSAPDHLPSVLLAGATQFALG 321

Query: 275 KKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
              +AE  +++  K  P+   A        L +      +       ++ ++  +   + 
Sbjct: 322 SLPQAEQYVDQYLKKIPNNLYAIKLMASIQLKNNQAKQAVTTLTPALKVVQQDPQLFALA 381

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKI 378
            +  +      +A      A +++P    ++  +A  +     N   I
Sbjct: 382 GEAYMRARDFTKATEYFEKAGELSPDNVALYTAMAMSKMGQGENESAI 429



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 90/263 (34%), Gaps = 15/263 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               A K+      +    +  L++ LE  + L ++    A       L I      A+ 
Sbjct: 458 EFDKALKVVKSQLAEQ--PDNPLLHNLEGGVYLGKKDLIKARASFNQALSIQPDYFPAIS 515

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L     +     +AQ+   + L           A+    +      +A  +L +  +  
Sbjct: 516 NLARIDLQEKHPEAAQQRFEEVLKQDKKNVQAMNALAGIALSQGNKEKATEWLEKASQEN 575

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +         +          +   S   A +   +  +++ A    A++ ++   K  
Sbjct: 576 PD----ELPPALQLGAHYLAINEPGKSLALAKKLQGIHPDNLSAIELLARAYLATGDKDA 631

Query: 279 AEVILEKIWKVNP--HP---EIANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVS 332
           A    +K+    P   P   ++A IY  + +   T   LK+A     I  +  E+ ++ +
Sbjct: 632 ALENFQKLAARLPDSAPAQLQLAQIYASMQNTRATADSLKKA---LAIKPDFWEAKLMQA 688

Query: 333 KIALEMGSIDQAHAKAMLAMKIA 355
           ++A+  G +D A + A    K  
Sbjct: 689 QLAVGDGRVDDALSIARDIQKQH 711



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 91/265 (34%), Gaps = 23/265 (8%)

Query: 105 KMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYF 162
           K  +   +    H + L  + L  +  LA    + A E  + +    P +    +     
Sbjct: 597 KSLALAKKLQGIHPDNLSAIELLARAYLATGDKDAALENFQKLAARLPDSAPAQLQLAQI 656

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            +       +A     KAL I PD       ++Q  +   +       ++     A++  
Sbjct: 657 YASMQNTRATADSL-KKALAIKPDFWEAK--LMQAQLAVGD-----GRVDDALSIARDIQ 708

Query: 223 RNRAILLIARSLE---NADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRK 278
           +    L +   LE      + + +A+     E+L K     ++  +  A  L    K+++
Sbjct: 709 KQHEKLPVGFELEGDLQMRQKNAVAAATAYEEALTKQKTGQLLIKLHTA--LSQSGKEKQ 766

Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A+  + +  K NP  +     +A +Y      +   +      + + + +   +L  ++ 
Sbjct: 767 ADQRVTQWLKENPADDGVRMYLAGVYLASKKYDPAIR--EYKTILKQHPDHAATLNNLAW 824

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358
           I  +      A   A  A K AP  
Sbjct: 825 IYQQKKDFATALDYAEKAYKQAPDS 849



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 7/198 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    +++    +  A  +   + +QH      + + LE  + + ++    A    E  L
Sbjct: 685 LMQAQLAVGDGRVDDALSIARDIQKQH--EKLPVGFELEGDLQMRQKNAVAAATAYEEAL 742

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
               T +  +  L+    + G    A +  T+ L  +P    V   +   Y+ +K++  A
Sbjct: 743 TKQKTGQL-LIKLHTALSQSGKEKQADQRVTQWLKENPADDGVRMYLAGVYLASKKYDPA 801

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I       K   +     A  L   +     K D   +   A ++ K   +S        
Sbjct: 802 IREYKTILKQHPD----HAATLNNLAWIYQQKKDFATALDYAEKAYKQAPDSPAILDTLG 857

Query: 268 KSLISQNKKRKAEVILEK 285
             L+ Q   ++   +L++
Sbjct: 858 WILVEQGDTKRGVSLLQQ 875



 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 12/162 (7%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL        +     A +  +   +++   +   V +    + LA ++Y+ A  + + +
Sbjct: 757 ALSQ------SGKEKQADQRVTQWLKENPADD--GVRMYLAGVYLASKKYDPAIREYKTI 808

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L+        + +L +   +  D  +A  YA KA   +PD+P + + +    V   +  R
Sbjct: 809 LKQHPDHAATLNNLAWIYQQKKDFATALDYAEKAYKQAPDSPAILDTLGWILVEQGDTKR 868

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            ++ L Q      E     A +    ++     G+ + +  +
Sbjct: 869 GVSLLQQAVAAVPEA----AEIHYHYAVGLYKSGNTVEARQE 906



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 30/245 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           E +    +     A  +L+  LQ     P  R      L     + G++ SA++   KAL
Sbjct: 42  EAKQYQQQGNDKAAIIQLKNALQQNPNDPEVRYL----LGTLYNKEGNIQSAEKELNKAL 97

Query: 182 DIS-------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           D+        P        + +              L++ +K ++E N   A LL  R  
Sbjct: 98  DLGMDPVKVLPGLSQAWLGMGKFQ----------QVLDETEKLSEEGN--FAELLTLRGN 145

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            +   G +  +     ++L+       A +  A+  +++N    A    E+  K+NP   
Sbjct: 146 ASLALGKIEEAKALFEQALRDKPGFAGALMGMARCSLARNDIESAMNFSEEAVKLNPENS 205

Query: 295 IANIYTH--LLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              ++    L ++N +   L    +  ++N ES+ + +  + I +       A A     
Sbjct: 206 DTVLFRGDLLRAQNKIDEALADYDKAIKLNPESLAAYINRATILISTKKFKAAQADLDAV 265

Query: 352 MKIAP 356
            KIAP
Sbjct: 266 RKIAP 270


>gi|158521101|ref|YP_001528971.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 808

 Score = 67.7 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 21/277 (7%)

Query: 91  GLMSIAAHNIPLA----RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           G +  A  ++  A    RK      +Q  FHN         Q+ L + Q + A    +  
Sbjct: 47  GTIMAAKKDLVAAEGTLRKAVEKAPKQAAFHNS------LGQVLLKKGQTDEAAAAFQRA 100

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           + +      A ++L   S   G  + A+ +  K L+++P        +      A +   
Sbjct: 101 VSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDG 160

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+       K        +A         +  + ++  +     +++      +   I  
Sbjct: 161 ALACFEAVLKINP----RQAEAHYNIGNIHKLREEVEPAARYYEQAIACNPGFVPPYIGL 216

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A+  ++  +   AE ++ K  +++P       E+AN+Y  L        +   L    ++
Sbjct: 217 ARIHLANRRNDLAESLIRKALRMDPKNGEALSELANLY--LREGRIEEAVPVFLAAIRVS 274

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            E  E    ++      G+  QA A    A+++ P  
Sbjct: 275 PEKAELHGALATAYSIRGATSQAMASFEKALELDPDS 311



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 76/251 (30%), Gaps = 25/251 (9%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L    +            A      +L+       A++ L        DL +A+   
Sbjct: 4   DKSLTLFNKAVALHRAGSLEGAETLYRDLLRENPNHADALHLLGTIMAAKKDLVAAEGTL 63

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            KA++ +P       ++ Q  +   +   A     +              L    +  + 
Sbjct: 64  RKAVEKAPKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVS-----------LDPGLAQAHF 112

Query: 238 DKGDMIASYHDAIES-------LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           + G +  +   A E+       L L  + + A       L        A    E + K+N
Sbjct: 113 NLGKISKAAGRADEAKTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKIN 172

Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P     H  I NI+          +     +    N   V   + +++I L     D A 
Sbjct: 173 PRQAEAHYNIGNIHKLREEVEPAARY--YEQAIACNPGFVPPYIGLARIHLANRRNDLAE 230

Query: 346 AKAMLAMKIAP 356
           +    A+++ P
Sbjct: 231 SLIRKALRMDP 241



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 6/162 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            +  A + +      +       + L   +I LA R+ ++A   +   L++      A+ 
Sbjct: 191 EVEPAARYYEQAIACNPGFVPPYIGL--ARIHLANRRNDLAESLIRKALRMDPKNGEALS 248

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     R G +  A      A+ +SP+   +  A+   Y +    S+A+    +  +  
Sbjct: 249 ELANLYLREGRIEEAVPVFLAAIRVSPEKAELHGALATAYSIRGATSQAMASFEKALELD 308

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +  R R     +        G+   +       + L  +  
Sbjct: 309 PDSARTR----FSYGNLLESSGNREGALEAYRRVMALDPDFA 346


>gi|311694260|gb|ADP97133.1| conserved hypothetical protein [marine bacterium HP15]
          Length = 389

 Score = 67.7 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 113/308 (36%), Gaps = 31/308 (10%)

Query: 134 RQYNIAHEKLEMMLQIPAT--RE---FAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            + + A    + +L  P    R      +  L  +    G L+ A+    + +       
Sbjct: 84  GETDRAILIHQNLLARPELPPRFSPQVTLE-LARDYLNAGLLDRAEALLHQLMGDKDYGR 142

Query: 189 WVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             ++ ++  Y   KEW++A      L +   +   +    A L    S E+  + D  A+
Sbjct: 143 HSSQQLIDLYQQEKEWAKAAEVARTLTRGDADPAMFKVL-AYLTCELSEESLKQDDRWAA 201

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLL 303
              A E+L+   + + A++   K L+ Q   R+A     K+++ NP   PE  +    L 
Sbjct: 202 QKLAKEALEYDRSCVRANLIMMKLLVRQGSYREAGSQCLKVFEQNPEFGPEAIDRLMKLE 261

Query: 304 SE-NTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            E   +G+L  A +L ++ +    + ++++  +          A       ++  P    
Sbjct: 262 HEHGDIGRL--AKKLRKLYENYPSTSLLLALVESVERASGRPAAIDLLRQELETRPSVRG 319

Query: 361 FLL---LAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS---VWLPLSPISKT 414
            L    +A  E+  + +  +++      + A   P++       S     WL   P  K 
Sbjct: 320 LLRLVEMAGYEKGMTTDEGRLVSRIGHLILANR-PVYRCVSCGFSGRQLHWL--CPSCK- 375

Query: 415 LCYFEWKI 422
               +W+ 
Sbjct: 376 ----QWET 379


>gi|187466319|emb|CAQ51811.1| transmembrane and tetratricopeptide repeat containing 1 [Mus
           musculus]
          Length = 593

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 90/295 (30%), Gaps = 25/295 (8%)

Query: 113 QHTFHNEYLVYLLEVQIALAER------QYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
           +     E L  L     +              A    +  LQ+      A+++L      
Sbjct: 212 EIWLSRESLFRLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKS 271

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
                 A     +++   PD      ++       + +  A        KN  + +    
Sbjct: 272 QEKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSD--- 328

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK-------RKA 279
            L    ++   D G    +     ++++L  +  +A +   +   S  +        R+A
Sbjct: 329 -LHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRA 387

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +      ++P   +  +Y +  +      L+       +     E  + ++++   MG
Sbjct: 388 LKVARTAEVLSP---LGALYYN--TGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMG 442

Query: 340 SIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392
              +A       +   PR  E + LL+ I     H   K L   + AL     DP
Sbjct: 443 QTKEAEKITSHIVSEEPRCLECYRLLSAIHSKQEH-HGKALEAIEKALQLKPKDP 496


>gi|160877201|ref|YP_001556517.1| HemY domain-containing protein [Shewanella baltica OS195]
 gi|160862723|gb|ABX51257.1| HemY domain protein [Shewanella baltica OS195]
 gi|315269405|gb|ADT96258.1| HemY domain protein [Shewanella baltica OS678]
          Length = 388

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 119/384 (30%), Gaps = 32/384 (8%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLFAVSRFFLS-CPAMLFHMLH 77
            +      V I  G+    TS    +  L  F   + +L + V         +       
Sbjct: 20  WLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEWLVISAINLMLRSRFIPHHW 79

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAER-- 134
           +R   K +  +  G +++A  + P A R M              L      Q        
Sbjct: 80  RRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPALNLLAAARAAQYQQKIGER 137

Query: 135 ----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                   A       +    TR          +    D     + A  +   +P     
Sbjct: 138 DQYLDRAAAQPLAANAVATTRTRYLLKQGELALARTELD-----KLAPTSKSKAPVLKLA 192

Query: 191 TEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               ++ Y   ++W  A+  L    +K++   +   N   +    +L  A       +  
Sbjct: 193 ----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNIATNCALLKAAAIKGEEALE 247

Query: 248 DAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
              +    S +     +      A  L   N+K +A  ++ K  + +P   +      + 
Sbjct: 248 QCWQWLSRSERNQSEFL---AIYAMGLCRFNRKEQALKLIAKKLRTSPESAVLTAIPEIA 304

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           +       K+ L+ E  ++ + +  + ++K+  +   + +A +      ++ P K  +L 
Sbjct: 305 TAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEAKSCWQNVCRLEPTKASWLA 364

Query: 364 LAQIEQANSHNTDKILYWTQSALH 387
           LA+I++             + A++
Sbjct: 365 LARIQE-QLGEQGNANQSYRQAVN 387


>gi|56415790|ref|YP_152865.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|56130047|gb|AAV79553.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
          Length = 398

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 81  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 192 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 252 WKNQSRKTRYQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 312 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRLHQPEEAA 381


>gi|261380376|ref|ZP_05984949.1| HemY family protein [Neisseria subflava NJ9703]
 gi|284796901|gb|EFC52248.1| HemY family protein [Neisseria subflava NJ9703]
          Length = 407

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 53/383 (13%), Positives = 126/383 (32%), Gaps = 26/383 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  ++    + +  +   +    Y  +V +     + R +    +  L   +F    L  
Sbjct: 1   MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58

Query: 61  VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116
             +F       PA +      R   +   +L +  ++        A +  + V Q     
Sbjct: 59  -IKFVFGLLNIPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEAAKVLQNKEAG 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175
            N  L  +L    A     + +    L  +  +P  ++ + + L  E +    D  +  +
Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALGCRDYPTVAQ 177

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233
               A  I+ +   +    ++      + S  +    +  K     ++   +      R 
Sbjct: 178 NLEAAAKINGNLSRLVRLQLRYAFDHGDASDVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237

Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L  E  D G + A      ES+K   LC       +  A+         +A   ++  + 
Sbjct: 238 LLSEVTDAGRLKACLKQIPESVKSGELC-------VAIAEKYERLGLYAEAVKWVKNHYP 290

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344
            N  PE+   +   +   +    ++A+ L     +   ++   L+ + ++A       +A
Sbjct: 291 QNRQPELLEAFVESVRFLSERDQQKAIDLADSWLQEQPDNAPLLMYLGQLAYGRKLWGKA 350

Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367
                 ++ + P     L+LA++
Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373


>gi|156740237|ref|YP_001430366.1| hypothetical protein Rcas_0215 [Roseiflexus castenholzii DSM 13941]
 gi|156231565|gb|ABU56348.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM
            13941]
          Length = 2262

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 90/259 (34%), Gaps = 12/259 (4%)

Query: 104  RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
                +Y        +       + ++   + + + A +  E  L+    +    Y L   
Sbjct: 1915 AARSAYARAVQLAPDHADYRYAQARLLRQQGRIDEARQVFEKALEHEPQQGAWHYELAEL 1974

Query: 164  SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              +  D  + + YA  A+ ++PD P     +V+  +  +E   A   + +      +   
Sbjct: 1975 LRQQRDPAAIEHYAA-AVQLAPDEPRHWLGLVEGLLERQERDAAQETVERALLRFGD--- 2030

Query: 224  NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              A L         ++G++  +     ++L     +        ++         A  +L
Sbjct: 2031 -HAALHAVAGALQEEQGEIERAAWHYEQALTRDPQNATYCWRLGRAQFELGNPDAARELL 2089

Query: 284  EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            E+   ++P     H  IA ++      ++   L  + R  E+  +     + ++++  +M
Sbjct: 2090 ERALALDPGSADAHATIARLFAS--ENDSRAALVHSQRAVELRPDDPALQIQLAEVLAQM 2147

Query: 339  GSIDQAHAKAMLAMKIAPR 357
               D+A      A++ AP 
Sbjct: 2148 RRFDEARQALERAVQRAPS 2166



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 82/263 (31%), Gaps = 11/263 (4%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A+ + SY        ++ ++Y    Q+  +   ++ A   L+  +++ ++       
Sbjct: 641 GHNAKAVESYARAVALRPDDPMLYARLGQVRRSIGDWSGARAALQRAVELDSSNAALQDE 700

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G++ SA      A+ + P        +        +   A   L    +   
Sbjct: 701 LGQALEACGEMESALAAYRAAVSLDPQCATYHRRLGALLRNCGDNDGAAAALRTALELRP 760

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +     A      +      GD   +      +  L   S   +     +     + R A
Sbjct: 761 DS----AATYGELAELLWRTGDTDQALDAYRRAHALAPESPDHTRALGLAYRRLGRSRDA 816

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           E +L +   + P     H +       L   +T   L    +   ++ +  +       +
Sbjct: 817 ERLLRQALTLAPERADLHYDYGIAAEALEQWDTA--LAAYEQAAMLDPQCADYARAAGAL 874

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
            L  G + +A +   +A++ A R
Sbjct: 875 LLRRGDLARARSLLAVALRRARR 897



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 78/281 (27%), Gaps = 11/281 (3%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             K   A    L  +       AR + +Y         E               +   A 
Sbjct: 554 QQKRSAAAAHELGHVYLQQGRFARALEAYRHAAQQQPGEPAYRRSVAVALRRLGRLEEAE 613

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            +L  ++    +       L       G    A     +A+ + PD P +   + Q    
Sbjct: 614 AELRDLIAASGSDAATYAELGEVYADAGHNAKAVESYARAVALRPDDPMLYARLGQVRRS 673

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +WS A   L +      E + + A L           G+M ++      ++ L     
Sbjct: 674 IGDWSGARAALQRAV----ELDSSNAALQDELGQALEACGEMESALAAYRAAVSLDPQCA 729

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRAL 315
                    L +      A   L    ++   P+ A  Y  L      + +T   L    
Sbjct: 730 TYHRRLGALLRNCGDNDGAAAALRTALELR--PDSAATYGELAELLWRTGDTDQALDAYR 787

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           R   +  ES +    +      +G    A      A+ +AP
Sbjct: 788 RAHALAPESPDHTRALGLAYRRLGRSRDAERLLRQALTLAP 828



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 92/342 (26%), Gaps = 48/342 (14%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            G + +   +   AR   +  +           +L   +  LA  +   A + +E   ++ 
Sbjct: 1768 GRVLLDCGHATAARTELTSATASD--PRHAQAHLFLGRACLALNEPQTAIDAIEQAAELR 1825

Query: 151  ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                    +L       G    A   A +A+ +   A      +   Y  +     A   
Sbjct: 1826 PDHAPTAAALSQAYAAAGRRERAIAAAQRAVRLDSSAGEHHHLLATLYAASGRLQEARAA 1885

Query: 211  LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            L        +     A             G + A+      +++L  +        A+ L
Sbjct: 1886 LINALTLQPDV----AAWHAQMGDICQRMGMIDAARSAYARAVQLAPDHADYRYAQARLL 1941

Query: 271  ISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
              Q +  +A  + EK  +  P     H E+A +   L  +     ++      ++  +  
Sbjct: 1942 RQQGRIDEARQVFEKALEHEPQQGAWHYELAEL---LRQQRDPAAIEHYAAAVQLAPDEP 1998

Query: 326  ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA--------QIEQA------- 370
               + + +  LE    D A      A+           +A        +IE+A       
Sbjct: 1999 RHWLGLVEGLLERQERDAAQETVERALLRFGDHAALHAVAGALQEEQGEIERAAWHYEQA 2058

Query: 371  -------------------NSHNTDKILYWTQSALHAMPDPL 393
                                  N D      + AL   P   
Sbjct: 2059 LTRDPQNATYCWRLGRAQFELGNPDAARELLERALALDPGSA 2100



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 8/201 (3%)

Query: 160  LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            L       G    A     +A+  +PD   V  A  +  +   +   A   L +  +   
Sbjct: 1320 LALVHLERGWHGEALAELNQAVATAPDRTEVRRARARALMAIGQLDHARADLVEALRREP 1379

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                  A      +    D G  + +   A  +  L  ++       A++L +  ++ +A
Sbjct: 1380 ----RDAESYALLAEILLDLGHTLQALDSARRAATLQPDNPQYRRMLARALRASGRRAEA 1435

Query: 280  EVILEKIWKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
               L  +      P+           L      ++           +   +   +  + L
Sbjct: 1436 IEHLSGVVNDTSPPQWWEELADDHLALGHLPAARIA-LEHAVAAAPDQATTRFRLGDVLL 1494

Query: 337  EMGSIDQAHAKAMLAMKIAPR 357
             +G    A  +  +A+   P 
Sbjct: 1495 RLGEPAAATEQLRIAITRRPD 1515



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 6/194 (3%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
              I  A   +     +   +  Y   L   Q  L     + A E LE  L +      A 
Sbjct: 2046 GEIERAAWHYEQALTRDPQNATYCWRLGRAQFEL--GNPDAARELLERALALDPGSADAH 2103

Query: 158  YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             ++        D  +A  ++ +A+++ PD P +   + +     + +  A   L +  + 
Sbjct: 2104 ATIARLFASENDSRAALVHSQRAVELRPDDPALQIQLAEVLAQMRRFDEARQALERAVQR 2163

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            A     +   LL          G    +      ++    +       A ++     +  
Sbjct: 2164 AP----SDPELLARYGEMALTVGLYHEALGAFERAIAQRPDEPRYHFFAGRAHRRLKQYS 2219

Query: 278  KAEVILEKIWKVNP 291
            +A     +  K+ P
Sbjct: 2220 RAIERFRRAVKLRP 2233


>gi|77165454|ref|YP_343979.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
 gi|76883768|gb|ABA58449.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
          Length = 934

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 89/267 (33%), Gaps = 14/267 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
            + A     A      +  +    +   + L+     L + + + A E     L+I    
Sbjct: 452 HLRAQEFDKALAAAKRLR-EKQPDSPLPINLIGA-AYLGKGEESKAQEAFRQALEIAPGD 509

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A ++L   + + G++  A     +AL   P        +           +A  ++ Q
Sbjct: 510 PSATHNLAMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQ 569

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +   +    R +L    +    ++G    S     E   L        +    + +  
Sbjct: 570 AMEKNSKALEPRVLL----ARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLEN 625

Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           ++ R      +K+ +V P     H  +A  Y  + + + +   K   +  ++N     S 
Sbjct: 626 SQLRDGVKTFQKLVEVQPQSAQAHYLLAKAYATVNNTDKLR--KELEQALKLNPNHTLSK 683

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + ++++ L   +  +A  K    +K A
Sbjct: 684 IAMTRL-LMQENQPEAANKLFQELKQA 709



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 116/393 (29%), Gaps = 37/393 (9%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQ 148
            +++I   NI  A  ++    + H  H   L+ L  LE Q    E+  N   + +E   +
Sbjct: 517 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 576

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               R      L       G    +     +  D+ P  P +   V    +   +    +
Sbjct: 577 ALEPRVL----LARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRDGV 632

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               +      E     A      +   A   +      +  ++LKL  N  ++ I   +
Sbjct: 633 KTFQK----LVEVQPQSAQAHYLLAKAYATVNNTDKLRKELEQALKLNPNHTLSKIAMTR 688

Query: 269 SLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+ +N+   A  +   L++ +  +P       +  +        +            + 
Sbjct: 689 LLMQENQPEAANKLFQELKQAYPEHPEVLAQEGWLAMRQNRPQDAIIAFRE-ALKRSPTS 747

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384
           + +V ++   L+ G+ +++ A     +K  P   +    LA +  A          +T  
Sbjct: 748 QIIVNLAHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTV 807

Query: 385 ALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS--SENINFSLEMA 442
              A         D  +             L    W +    P      +E        A
Sbjct: 808 VKRAP--------DNVV------------ALNNLAWLLRKNDPAKALEYAERALELAPNA 847

Query: 443 YPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475
            P  D   ML   K     S++ +    D    
Sbjct: 848 PPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPE 880



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 87/338 (25%), Gaps = 76/338 (22%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK---LEMMLQIPA 151
           + A + P A K                +YL   + AL +R++  A E       + +   
Sbjct: 78  VKAGDGPSAEKELKRALSLGLASEAAAIYL--TRAALLQREFQTAIETSTDYPALPEDEQ 135

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKEW- 204
               A+    +   R   L  A++    AL I+P AP          AV  +    ++W 
Sbjct: 136 AELLALRGHAYLGLRE--LEKAEKSYESALSINPAAPEAGFGKARIAAVQNRLEETRQWL 193

Query: 205 ------------------------------------------SRAITFLNQKKKN----- 217
                                                     + A   LN+         
Sbjct: 194 EKVLQTTPSFAPAWSLLGDLERYQGNGEAAEQAYGKAIAHRFNNASDLLNRALVRIYLKD 253

Query: 218 -----------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                      +K    +  +      L    +     +     ++L      + A   A
Sbjct: 254 YEGAASDLETLSKRARNHPGVTYAQGLLH-FQQQQYADALTSFQKTLSKNPEYMPAVFYA 312

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKE 323
             +   Q +  +A  +L +  K  PH + A        L   N          +   N  
Sbjct: 313 GIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMIRLREGNYTSAQAILEPIIAQNPN 372

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              +L ++    L  G  +++ A         P     
Sbjct: 373 DTAALDLLGSAILGQGKPEKSAAYFQKVTAQTPESAAA 410



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 106/294 (36%), Gaps = 12/294 (4%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A    ++ +   N   A+ +   +  Q+      L  L      L + +   +    + +
Sbjct: 343 AKTLAMIRLREGNYTSAQAILEPIIAQNPNDTAALDLL--GSAILGQGKPEKSAAYFQKV 400

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                    A   L       G+         KA+++    P     ++  ++ A+E+ +
Sbjct: 401 TAQTPESAAAYMKLGLGFMMSGEHEQGIGALEKAIELDSQLPQADRLIILGHLRAQEFDK 460

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+     K+   K+ +    I LI  +     KG+   +     ++L++      A+   
Sbjct: 461 ALAA--AKRLREKQPDSPLPINLIGAA--YLGKGEESKAQEAFRQALEIAPGDPSATHNL 516

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-H-PEIANIYTHLLSENTVGKLKR-ALRLEEINKE 323
           A   I +    KA  + ++  + +P H   +  +      +    K K    +  E N +
Sbjct: 517 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 576

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHN 374
           ++E  V++++  LE G   ++ A       + P     LL+   AQ+E +   +
Sbjct: 577 ALEPRVLLARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRD 630



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 18/217 (8%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A K+   + Q +  H E L    E  +A+ + +   A       L+   T +  + +L
Sbjct: 697 EAANKLFQELKQAYPEHPEVLAQ--EGWLAMRQNRPQDAIIAFREALKRSPTSQI-IVNL 753

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                + G+ N +       L   P+   V   +   Y+  K+  +A +      K A +
Sbjct: 754 AHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTVVKRAPD 813

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                 ++ +        K D   +   A  +L+L  N+          L+ + + +++ 
Sbjct: 814 -----NVVALNNLAWLLRKNDPAKALEYAERALELAPNAPPVMDTLGMLLLEKGEAKRSL 868

Query: 281 VILEKIWKVNP-------HPEIANIYTHLLSENTVGK 310
            +L K     P       H  +A        E+   +
Sbjct: 869 RLLRKASDRAPENLTIRYHFALALA---QNGESAQAR 902



 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 2/126 (1%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             + LA +Q   A      +++       A+ +L +   R  D   A  YA +AL+++P+
Sbjct: 788 ANLYLALKQEQKAASAFTTVVKRAPDNVVALNNLAWL-LRKNDPAKALEYAERALELAPN 846

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           AP V + +    +   E  R++  L +    A E    R    +A + +N +        
Sbjct: 847 APPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPENLTIRYHFALALA-QNGESAQARQVL 905

Query: 247 HDAIES 252
              +++
Sbjct: 906 DGILDA 911


>gi|229845557|ref|ZP_04465684.1| HemY [Haemophilus influenzae 6P18H1]
 gi|229811492|gb|EEP47194.1| HemY [Haemophilus influenzae 6P18H1]
          Length = 428

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V  Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208


>gi|197364720|ref|YP_002144357.1| protoheme IX biogenesis protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197096197|emb|CAR61793.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 379

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 107/370 (28%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I        TS   +  IL   +     +  + R      A        R 
Sbjct: 2   IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 61

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 62  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 119

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 120 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 172

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
              Q Y+    WS  +  +    K       +RA+L     +   D+             
Sbjct: 173 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 232

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +     +   +  A+ LI  +    A+ I+    K      +      L + N  
Sbjct: 233 WKNQSRKTRYQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 292

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  +   +       + +  ++ G   +A      A+K  P    +  LA   
Sbjct: 293 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 352

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 353 DRLHQPEEAA 362


>gi|167561973|ref|ZP_02354889.1| putative hemY protein [Burkholderia oklahomensis EO147]
          Length = 396

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 122/398 (30%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +      V       V I +       S    +  +         L  
Sbjct: 3   LRGIIWLAVLFAIAAGLATVGRFDTGQVLIVYPPYRVDVSLNFFVLAIIVVFIVLYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   ++   +L   L ++ A     A K               
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAQASLRDALANLYAGRFSRAEKAARDALSVDANQGAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
            +       A A  + +    + E + ++          L     R    D   A     
Sbjct: 123 SLI-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K W+  +    +  +  +  +   A+ L  ++ E+  
Sbjct: 178 EMQASGGKRIHAQQIALRAQQQLKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236

Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D   ++  +     + +        +  AA+ LI+  ++++A  I+E     N +
Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEGALAHNWN 293

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A        E  + L  + ++  +     +A +    A+
Sbjct: 294 ARLLRRYPDTAGSDALPLIQKAEGWRRDRPEDADLLFALGRLCQQQQLWGKAQSFLESAL 353

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +    +     ++ +SAL
Sbjct: 354 KLADDEPLKIRTHRALARLFERLGESDKAAQHYRESAL 391


>gi|145631662|ref|ZP_01787426.1| adenylate cyclase [Haemophilus influenzae R3021]
 gi|144982741|gb|EDJ90273.1| adenylate cyclase [Haemophilus influenzae R3021]
          Length = 428

 Score = 67.3 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V  Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208


>gi|187929642|ref|YP_001900129.1| HemY domain-containing protein [Ralstonia pickettii 12J]
 gi|309781592|ref|ZP_07676326.1| porphyrin biosynthesis protein [Ralstonia sp. 5_7_47FAA]
 gi|187726532|gb|ACD27697.1| HemY domain protein [Ralstonia pickettii 12J]
 gi|308919567|gb|EFP65230.1| porphyrin biosynthesis protein [Ralstonia sp. 5_7_47FAA]
          Length = 397

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 105/375 (28%), Gaps = 21/375 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S   +L+ L        L+  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLFYPPYRVEMSLNFVLAALLATFVVLHLVMR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    K   AL   + S+ A     A +               
Sbjct: 61  LFHHVAGMPARAAAYRERNRILKASAALREAMESLFAGRFGHAERQAREAQA--WEPQRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E +   A             +  ++  L  ++    D   A     
Sbjct: 119 TAALIGARAAHRMQETERRDAWMAEVSSPDREQAKLVSMAELLVDAR---DAEGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +               ++ +   K WS  +      +K     +     +L AR  + A 
Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWSEVLRLTRALEKRNAIHS-----VLAARLKQMAC 230

Query: 239 KGDMIASYHDAIESLKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +  +    HDA                    +  AA       +   A+ I+E+  K + 
Sbjct: 231 ETLLAERRHDADALNGFWRELTTEERRSPRIASQAALYFAQLGRTDDAKRIVEEGLKTHW 290

Query: 292 HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              +   Y    +    +  +++A +    +    E    +  +  +     +A +    
Sbjct: 291 DGRLIRRYADCAVPGKALPLIQQAEKWLAQHPVDAELFYTLGMLCFKEQLWGKAQSNLES 350

Query: 351 AMKIAPRKEIFLLLA 365
           A+K A       L A
Sbjct: 351 ALKYADADHSGSLRA 365


>gi|26338035|dbj|BAC32703.1| unnamed protein product [Mus musculus]
          Length = 604

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 90/295 (30%), Gaps = 25/295 (8%)

Query: 113 QHTFHNEYLVYLLEVQIALAER------QYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
           +     E L  L     +              A    +  LQ+      A+++L      
Sbjct: 223 EIWLSRESLFRLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKS 282

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
                 A     +++   PD      ++       + +  A        KN  + +    
Sbjct: 283 QEKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSD--- 339

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK-------RKA 279
            L    ++   D G    +     ++++L  +  +A +   +   S  +        R+A
Sbjct: 340 -LHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRA 398

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +      ++P   +  +Y +  +      L+       +     E  + ++++   MG
Sbjct: 399 LKVARTAEVLSP---LGALYYN--TGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMG 453

Query: 340 SIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392
              +A       +   PR  E + LL+ I     H   K L   + AL     DP
Sbjct: 454 QTKEAEKITSHIVSEEPRCLECYRLLSAIHSKQEH-HGKALEAIEKALQLKPKDP 507


>gi|254434614|ref|ZP_05048122.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
           oceani AFC27]
 gi|207090947|gb|EDZ68218.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
           oceani AFC27]
          Length = 926

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 89/267 (33%), Gaps = 14/267 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
            + A     A      +  +    +   + L+     L + + + A E     L+I    
Sbjct: 444 HLRAQEFDKALAAAKRLR-EKQPDSPLPINLIGA-AYLGKGEESKAQEAFRQALEIAPGD 501

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A ++L   + + G++  A     +AL   P        +           +A  ++ Q
Sbjct: 502 PSATHNLAMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQ 561

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +   +    R +L    +    ++G    S     E   L        +    + +  
Sbjct: 562 AMEKNSKALEPRVLL----ARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLEN 617

Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           ++ R      +K+ +V P     H  +A  Y  + + + +   K   +  ++N     S 
Sbjct: 618 SQLRDGVKTFQKLVEVQPQSAQAHYLLAKAYATVNNTDKLR--KELEQALKLNPNHTLSK 675

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + ++++ L   +  +A  K    +K A
Sbjct: 676 IAMTRL-LMQENQPEAANKLFQELKQA 701



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 116/393 (29%), Gaps = 37/393 (9%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQ 148
            +++I   NI  A  ++    + H  H   L+ L  LE Q    E+  N   + +E   +
Sbjct: 509 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 568

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               R      L       G    +     +  D+ P  P +   V    +   +    +
Sbjct: 569 ALEPRVL----LARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRDGV 624

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               +      E     A      +   A   +      +  ++LKL  N  ++ I   +
Sbjct: 625 KTFQK----LVEVQPQSAQAHYLLAKAYATVNNTDKLRKELEQALKLNPNHTLSKIAMTR 680

Query: 269 SLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+ +N+   A  +   L++ +  +P       +  +        +            + 
Sbjct: 681 LLMQENQPEAANKLFQELKQAYPEHPEVLAQEGWLAMRQNRPQDAIIAFRE-ALKRSPTS 739

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384
           + +V ++   L+ G+ +++ A     +K  P   +    LA +  A          +T  
Sbjct: 740 QIIVNLAHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTV 799

Query: 385 ALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS--SENINFSLEMA 442
              A         D  +             L    W +    P      +E        A
Sbjct: 800 VKRAP--------DNVV------------ALNNLAWLLRKNDPAKALEYAERALELAPNA 839

Query: 443 YPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475
            P  D   ML   K     S++ +    D    
Sbjct: 840 PPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPE 872



 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 87/338 (25%), Gaps = 76/338 (22%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK---LEMMLQIPA 151
           + A + P A K                +YL   + AL +R++  A E       + +   
Sbjct: 70  VKAGDGPSAEKELKRALSLGLASEAAAIYL--TRAALLQREFQTAIETSTDYPALPEDEQ 127

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKEW- 204
               A+    +   R   L  A++    AL I+P AP          AV  +    ++W 
Sbjct: 128 AELLALRGHAYLGLRE--LEKAEKSYESALSINPAAPEAGFGKARIAAVQNRLEETRQWL 185

Query: 205 ------------------------------------------SRAITFLNQKKKN----- 217
                                                     + A   LN+         
Sbjct: 186 EKVLQTTPSFAPAWSLLGDLERYQGNGEAAEQAYGKAIAHRFNNASDLLNRALVRIYLKD 245

Query: 218 -----------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                      +K    +  +      L    +     +     ++L      + A   A
Sbjct: 246 YEGAASDLETLSKRARNHPGVTYAQGLLH-FQQQQYADALTSFQKTLSKNPEYMPAVFYA 304

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKE 323
             +   Q +  +A  +L +  K  PH + A        L   N          +   N  
Sbjct: 305 GIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMIRLREGNYTSAQAILEPIIAQNPN 364

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              +L ++    L  G  +++ A         P     
Sbjct: 365 DTAALDLLGSAILGQGKPEKSAAYFQKVTAQTPESAAA 402



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 106/294 (36%), Gaps = 12/294 (4%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A    ++ +   N   A+ +   +  Q+      L  L      L + +   +    + +
Sbjct: 335 AKTLAMIRLREGNYTSAQAILEPIIAQNPNDTAALDLL--GSAILGQGKPEKSAAYFQKV 392

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                    A   L       G+         KA+++    P     ++  ++ A+E+ +
Sbjct: 393 TAQTPESAAAYMKLGLGFMMSGEHEQGIGALEKAIELDSQLPQADRLIILGHLRAQEFDK 452

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+     K+   K+ +    I LI  +     KG+   +     ++L++      A+   
Sbjct: 453 ALAA--AKRLREKQPDSPLPINLIGAA--YLGKGEESKAQEAFRQALEIAPGDPSATHNL 508

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-H-PEIANIYTHLLSENTVGKLKR-ALRLEEINKE 323
           A   I +    KA  + ++  + +P H   +  +      +    K K    +  E N +
Sbjct: 509 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 568

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHN 374
           ++E  V++++  LE G   ++ A       + P     LL+   AQ+E +   +
Sbjct: 569 ALEPRVLLARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRD 622



 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 18/217 (8%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A K+   + Q +  H E L    E  +A+ + +   A       L+   T +  + +L
Sbjct: 689 EAANKLFQELKQAYPEHPEVLAQ--EGWLAMRQNRPQDAIIAFREALKRSPTSQI-IVNL 745

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                + G+ N +       L   P+   V   +   Y+  K+  +A +      K A +
Sbjct: 746 AHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTVVKRAPD 805

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                 ++ +        K D   +   A  +L+L  N+          L+ + + +++ 
Sbjct: 806 -----NVVALNNLAWLLRKNDPAKALEYAERALELAPNAPPVMDTLGMLLLEKGEAKRSL 860

Query: 281 VILEKIWKVNP-------HPEIANIYTHLLSENTVGK 310
            +L K     P       H  +A        E+   +
Sbjct: 861 RLLRKASDRAPENLTIRYHFALALA---QNGESAQAR 894



 Score = 44.2 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 2/126 (1%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             + LA +Q   A      +++       A+ +L +   R  D   A  YA +AL+++P+
Sbjct: 780 ANLYLALKQEQKAASAFTTVVKRAPDNVVALNNLAWL-LRKNDPAKALEYAERALELAPN 838

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           AP V + +    +   E  R++  L +    A E    R    +A + +N +        
Sbjct: 839 APPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPENLTIRYHFALALA-QNGESAQARQVL 897

Query: 247 HDAIES 252
              +++
Sbjct: 898 DGILDA 903


>gi|145642201|ref|ZP_01797769.1| HemY [Haemophilus influenzae R3021]
 gi|145273125|gb|EDK13003.1| HemY [Haemophilus influenzae 22.4-21]
          Length = 428

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V  Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208


>gi|298712522|emb|CBJ26790.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Ectocarpus
           siliculosus]
          Length = 977

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 93/290 (32%), Gaps = 15/290 (5%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQI 149
           G +  +  N   ARK+ +   ++ +    +L + L              A       ++ 
Sbjct: 630 GKLEASEGNRDAARKIFARGIRESSEDVSFLCHSLG--SLELAADRLGEARAVFLAGIER 687

Query: 150 --PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
               ++      L       G+ ++A+ Y  ++++  P      +A       A  +  A
Sbjct: 688 YPSGSQLLLGAGLAIAKM--GEPDNAREYFRRSVEADPSHAHAWQAWGLMETRAGNFKAA 745

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            +   +  K           L  A ++     G+   +       L+ C + +      A
Sbjct: 746 RSLWERGLKANPT----HGPLWQAYAVMEEKVGEPERARKLFEAGLERCPDHVQLHQAWA 801

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHP-EIANIY--THLLSENTVGKLKRALRLEEINKES 324
                    ++A  ++ +  +++PH   +  +Y        + V   K          + 
Sbjct: 802 VMEGMLGDLKRARELVVEGLRLDPHHGALWTVYSIVERQGGSDVKARKVLELGVRACPDH 861

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSH 373
                  +++  ++G+  +A  +    ++  P    ++   A +E A  +
Sbjct: 862 GPLHRCWAQMEHQLGNTAEARRRFERGLEACPTYARLYYAYADMEAAMGN 911



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 82/232 (35%), Gaps = 12/232 (5%)

Query: 166 RIGDLNSAQR-YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             G+ ++A++ +A    + S D  ++  ++    + A     A        +     ++ 
Sbjct: 635 SEGNRDAARKIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPSGSQ- 693

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              LL+   L  A  G+   +      S++   +   A              + A  + E
Sbjct: 694 ---LLLGAGLAIAKMGEPDNAREYFRRSVEADPSHAHAWQAWGLMETRAGNFKAARSLWE 750

Query: 285 KIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMG 339
           +  K NP H  +   Y  +  E  VG+ +RA +L E       + V+     + +   +G
Sbjct: 751 RGLKANPTHGPLWQAYAVM--EEKVGEPERARKLFEAGLERCPDHVQLHQAWAVMEGMLG 808

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            + +A    +  +++ P       +  I +    +  K     +  + A PD
Sbjct: 809 DLKRARELVVEGLRLDPHHGALWTVYSIVERQGGSDVKARKVLELGVRACPD 860



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 106/324 (32%), Gaps = 35/324 (10%)

Query: 69  PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY--LLE 126
           PA +     +R   KG  A    ++  ++   P A +  + + ++    +    +  LL 
Sbjct: 117 PAEMGGSRARRIKVKGLYARARKILRSSS---PSASETAAAILEEALTVDPQDGHSWLLL 173

Query: 127 VQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A    N A +     +++ P            ++ + GD   A+   +  L+  P
Sbjct: 174 ARTREAMGDVNAASDVFKRAVVECPGNAHLWQSWGMLQA-KFGDCAKARISFSNGLEADP 232

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-----------LIARSL 234
             P+V  A         +  RA   L   +++         +L           L+ +++
Sbjct: 233 GNPFVCHAWALMEQRDGDNDRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAM 292

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           +  +K     S            +   ++  AA     + KKR AE   E          
Sbjct: 293 DRLEKAASARSKRSGGGG---SPD--PSAAWAAA--GDRPKKRSAE---EAEDADQGVTA 342

Query: 295 IANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAML 350
           +   + +   E + G  KR+L L         ++  + V  ++  +  G++  A      
Sbjct: 343 LLMAWANF--EESRGNEKRSLELMAKAMENEPDNARARVGRARFEMRRGNMRDARIFLSE 400

Query: 351 AMKIAPRKEIFLLL-AQIEQANSH 373
           A  +         + A +E    +
Sbjct: 401 AANLPQEDGTLFSMWATLEIKEGN 424


>gi|148978780|ref|ZP_01815160.1| HemY protein [Vibrionales bacterium SWAT-3]
 gi|145962201|gb|EDK27485.1| HemY protein [Vibrionales bacterium SWAT-3]
          Length = 393

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 110/362 (30%), Gaps = 18/362 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI  F V+   +      S     V I+  N+    S   +   +   L A   L  
Sbjct: 1   MIRLIFLFLVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTMAIFVIVLLAALFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LFKKLIYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178
           L YL+  Q A  +       +K   +         AV  L     +I +    +A     
Sbjct: 119 LCYLVASQAAHEQGNTAE-RDKYIELASKQDDSLLAVE-LTKAKQQISESNYEAA---FD 173

Query: 179 KALDISPDAPWVTEAVVQQ----YVLAKEWSRAIT----FLNQKKKNAKEWNRNRAILLI 230
              ++    P    AV+      Y+  K W   +         K   A E          
Sbjct: 174 TLSNLKGSHP-NNTAVLGLLKATYMQLKLWQPLLELTPKLAKNKLLTADEQRELEQKAQC 232

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
               + A +           +  +    S     C  K LI++    +A  ++++     
Sbjct: 233 GLLHDVAQQQGSEGLISHWNKLSRKQKQSSHLVSCFVKQLIARKADAEAFTVIKENIAKT 292

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              E+  +   L   +    +    R    +  + E+   +++  L      +A +    
Sbjct: 293 GSNELYMLLPELNLADHHPVVVMLERAISKDNNNAEAHSALAQFYLREQKWAEAQSHFEK 352

Query: 351 AM 352
           A+
Sbjct: 353 AL 354


>gi|307728971|ref|YP_003906195.1| HemY domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307583506|gb|ADN56904.1| HemY domain protein [Burkholderia sp. CCGE1003]
          Length = 396

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/402 (11%), Positives = 118/402 (29%), Gaps = 47/402 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++  +     +V       V + +       S  + +  L         L  
Sbjct: 3   IRGLLWLALLFAIAVVLAVVGRFDMGQVLLVYPPYRVDMSLNLFVVGLVVLFILVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
           + R     P  +     +    K + AL   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARARVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122

Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
                   H  H          QI  A   +  A      ++     R            
Sbjct: 123 GLIAATAAHRMHEYGRRDEWLAQIDQA--DWQDAR-----LMATADMRADGR-------- 167

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221
              D + A     +            + +++     K W   +  +     ++  +    
Sbjct: 168 ---DADGALAALKEMQSQGGRRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280
            R R +       +     D +    +++    +        +  AA+ L++ N+ ++A 
Sbjct: 225 VRLRQLAAENLLRDRRHNADALLELWNSLTPTERHSPRL---ADLAAELLVALNRPQEAR 281

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            I+E     N    +   Y      + +  +++A   ++   +  + L  + ++ L    
Sbjct: 282 KIVEDALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQKDRPDDADLLFALGRLCLHQQL 341

Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKI 378
             +A +    A+K+A  +         LA++ +    +T+K 
Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHE-QLGDTEKA 382


>gi|53725178|ref|YP_102501.1| hypothetical protein BMA0732 [Burkholderia mallei ATCC 23344]
 gi|67640112|ref|ZP_00438931.1| putative hemY protein [Burkholderia mallei GB8 horse 4]
 gi|121600286|ref|YP_993591.1| hypothetical protein BMASAVP1_A2281 [Burkholderia mallei SAVP1]
 gi|124386090|ref|YP_001028946.1| hypothetical protein BMA10229_A3003 [Burkholderia mallei NCTC
           10229]
 gi|126441846|ref|YP_001058123.1| HemY protein N-terminus family protein [Burkholderia pseudomallei
           668]
 gi|126449239|ref|YP_001081139.1| hypothetical protein BMA10247_1594 [Burkholderia mallei NCTC 10247]
 gi|167003505|ref|ZP_02269291.1| putative hemY protein [Burkholderia mallei PRL-20]
 gi|167718600|ref|ZP_02401836.1| hypothetical protein BpseD_06227 [Burkholderia pseudomallei DM98]
 gi|217419852|ref|ZP_03451358.1| HemY-like protein [Burkholderia pseudomallei 576]
 gi|237811342|ref|YP_002895793.1| HemY protein, N-terminus family [Burkholderia pseudomallei MSHR346]
 gi|254178554|ref|ZP_04885209.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|254199406|ref|ZP_04905772.1| putative hemY protein [Burkholderia mallei FMH]
 gi|254205721|ref|ZP_04912073.1| putative hemY protein [Burkholderia mallei JHU]
 gi|254357879|ref|ZP_04974152.1| putative hemY protein [Burkholderia mallei 2002721280]
 gi|52428601|gb|AAU49194.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
 gi|121229096|gb|ABM51614.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|124294110|gb|ABN03379.1| putative hemY protein [Burkholderia mallei NCTC 10229]
 gi|126221339|gb|ABN84845.1| HemY-like protein [Burkholderia pseudomallei 668]
 gi|126242109|gb|ABO05202.1| putative hemY protein [Burkholderia mallei NCTC 10247]
 gi|147749002|gb|EDK56076.1| putative hemY protein [Burkholderia mallei FMH]
 gi|147753164|gb|EDK60229.1| putative hemY protein [Burkholderia mallei JHU]
 gi|148027006|gb|EDK85027.1| putative hemY protein [Burkholderia mallei 2002721280]
 gi|160699593|gb|EDP89563.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|217397156|gb|EEC37172.1| HemY-like protein [Burkholderia pseudomallei 576]
 gi|237502864|gb|ACQ95182.1| HemY protein, N-terminus family [Burkholderia pseudomallei MSHR346]
 gi|238520767|gb|EEP84224.1| putative hemY protein [Burkholderia mallei GB8 horse 4]
 gi|243060979|gb|EES43165.1| putative hemY protein [Burkholderia mallei PRL-20]
          Length = 396

 Score = 66.9 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 125/398 (31%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S    +  +         L  
Sbjct: 3   LRGIIWLAVLFAIAAALATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   ++   AL   L ++ A     A K            +  
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRAEKAARDALAVDANQSAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
            +       A A  + +    + E + ++          L     R    D   A     
Sbjct: 123 SLV-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K W+  +    +  +  +  +   A+ L  ++ E+  
Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236

Query: 238 -DKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            D+     +  +  +SL    +        +  AA+ LI+  ++++A  I+E     N +
Sbjct: 237 RDRRHDADALLEVWQSLSATERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A        +  + L  + ++  +     +A +    A+
Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +          ++ +SAL
Sbjct: 354 KLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391


>gi|187466320|emb|CAQ51812.1| transmembrane and tetratricopeptide repeat containing 1 [Mus
           musculus]
          Length = 631

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 275 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 334

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 335 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 390

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 391 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 445

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     E  + ++++   MG   +A       +   PR  E + L
Sbjct: 446 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 505

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H   K L   + AL     DP
Sbjct: 506 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 534


>gi|260583213|ref|ZP_05850991.1| adenylate cyclase [Haemophilus influenzae NT127]
 gi|260093715|gb|EEW77625.1| adenylate cyclase [Haemophilus influenzae NT127]
          Length = 428

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V  Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208


>gi|146305324|ref|YP_001185789.1| HemY domain-containing protein [Pseudomonas mendocina ymp]
 gi|145573525|gb|ABP83057.1| HemY domain protein [Pseudomonas mendocina ymp]
          Length = 415

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 124/369 (33%), Gaps = 25/369 (6%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             V   +    Y++  +  L ++   +  + L+    R  LS   +           +  
Sbjct: 29  GYVLFAYQGFRYQSGLWAFLGLVLAVVVLYYLIKWTLRLLLSSTRLANPWSRLHRNRRVR 88

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLE 144
            A   GL+ +A      A++  +  ++     ++ L+Y L   + A    Q+  + E LE
Sbjct: 89  LASEQGLLDLAEGRWARAQRQLTRAAE---ADSQPLMYYLGAARAANKLGQHEQSDELLE 145

Query: 145 MMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             L      E A+   + E  R  GD  +A           P    V   + + Y+  ++
Sbjct: 146 RALHKQPQAELAIALTHAELQRSRGDNEAALETLQVMRQRHPGHHLVLRQLQRLYLQRQD 205

Query: 204 WSRAITFLNQKKKNAK---------EWNRNRAILLIARSLENADKGDMIASYHDAIES-- 252
           WS  +  L + +K            E    R  L  A           +     A +   
Sbjct: 206 WSALLGLLPELRKEKALPAAEIDELERETWRGRLADAGLAGQGQGETALQPLTQAWQQLS 265

Query: 253 --LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
             L+     +       + L     + +AE +L    K +    +A  Y  L   +   +
Sbjct: 266 APLRQEPELV---ATYVEQLRRLGAQEEAEEVLRSTLKRSYDSRLARFYGVLRGADPARQ 322

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLLAQ 366
           L+ A    + + +    L+ + ++ L+     +A      ++K+        E+  LLAQ
Sbjct: 323 LQTAELWLKQHPQDPALLLTLGRLCLQNQLWGKARDYFETSLKLERHPETCAELARLLAQ 382

Query: 367 IEQANSHNT 375
           + +    N 
Sbjct: 383 LGELERSNQ 391


>gi|222613085|gb|EEE51217.1| hypothetical protein OsJ_32045 [Oryza sativa Japonica Group]
          Length = 1004

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 89/300 (29%), Gaps = 43/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  E+ +        ++ +     P      + S   E    GD+ +A+    +A    
Sbjct: 636 AAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMS-AKEKWLAGDVPAARAILQEAYASL 694

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P++  +  A  +      E  RA   L++ ++            ++ R L N D+     
Sbjct: 695 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEE---- 750

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                 E LKL  +     +   +         KA+ + E   K  P      +    L 
Sbjct: 751 -RKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLE 809

Query: 305 ENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           E   G  K    L    + N  + E  +   +  L  G+  +A A    A++  P   I 
Sbjct: 810 EKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGIL 869

Query: 362 LLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMPD 391
              A                I++ +                   DK   W   A+   PD
Sbjct: 870 WAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPD 929


>gi|167835849|ref|ZP_02462732.1| HemY protein N-terminus family [Burkholderia thailandensis MSMB43]
          Length = 396

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/404 (11%), Positives = 121/404 (29%), Gaps = 34/404 (8%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S    +  +         L  
Sbjct: 3   LRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ------QH 114
           + R     P  +     +   ++   +L   L ++ A     A K               
Sbjct: 63  IVRNLWRMPQRVAAYRARMRNERAQASLRDALANLYAGRFSRAEKAARDALAVGSNQGAA 122

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLE--MMLQIPATREFAVYSLYFESCRIGDLNS 172
           +       + +       E    ++ ++ +   +L     R               D   
Sbjct: 123 SLIAAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGR-----------DAEG 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     +            +  ++     K W   +    +  +  +  +   A+ L  +
Sbjct: 172 ALAALAEMQASGGKRIHAQQIALRAQQQNKNWVEVLKI-AKALEKREALHPAAAVRLRQQ 230

Query: 233 SLENA------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + E+       D   ++  +     + +        +  AA+ LI+  ++++A  I+E  
Sbjct: 231 AAEHLLRDRRHDADALLEVWQTLSAAERQSPRL---ADLAAELLIALERRQEARRIIEDA 287

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
              N +  +   Y      + +  +++A        +  + L  + ++  +     +A +
Sbjct: 288 LAHNWNARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQS 347

Query: 347 KAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
               A+K+A  +         LA++ +          ++ +SAL
Sbjct: 348 FLEAALKLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391


>gi|301169318|emb|CBW28917.1| predicted protoheme IX synthesis protein [Haemophilus influenzae
           10810]
          Length = 428

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 76/246 (30%), Gaps = 15/246 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           +      L+++     V +  V+ Y+ +K +      L+    +    +     L     
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLRSKAYQALDKILDNVANSGLFNDEEFKALRSKTE 232

Query: 234 LENADK 239
               D+
Sbjct: 233 NGLLDE 238


>gi|18071414|gb|AAL58273.1|AC068923_15 putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
 gi|31432880|gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|125532522|gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group]
          Length = 1039

 Score = 66.5 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 89/300 (29%), Gaps = 43/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  E+ +        ++ +     P      + S   E    GD+ +A+    +A    
Sbjct: 671 AAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMS-AKEKWLAGDVPAARAILQEAYASL 729

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P++  +  A  +      E  RA   L++ ++            ++ R L N D+     
Sbjct: 730 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEE---- 785

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                 E LKL  +     +   +         KA+ + E   K  P      +    L 
Sbjct: 786 -RKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLE 844

Query: 305 ENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           E   G  K    L    + N  + E  +   +  L  G+  +A A    A++  P   I 
Sbjct: 845 EKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGIL 904

Query: 362 LLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMPD 391
              A                I++ +                   DK   W   A+   PD
Sbjct: 905 WAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPD 964


>gi|167569225|ref|ZP_02362099.1| putative hemY protein [Burkholderia oklahomensis C6786]
          Length = 396

 Score = 66.5 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 122/398 (30%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +      V       V I +       S    +  +         L  
Sbjct: 3   LRGIIWLAVLFAIAAGLATVGRFDTGQVLIVYPPYRVDVSLNFFVLAVIVVFIVLYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   ++   +L   L ++ A     A K               
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAQASLRDALANLYAGRFSRAEKAARDALSVDANQGAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
            +       A A  + +    + E + ++          L     R    D   A     
Sbjct: 123 SLI-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K W+  +    +  +  +  +   A+ L  ++ E+  
Sbjct: 178 EMQASGGKRIHAQQIALRAQQQLKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236

Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D   ++  +     + +        +  AA+ LI+  ++++A  I+E     N +
Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEGALAHNWN 293

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A        E  + L  + ++  +     +A +    A+
Sbjct: 294 ARLLRRYPDTAGPDALPLIQKAEGWRRDRPEDADLLFALGRLCQQQQLWGKAQSFLESAL 353

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +    +     ++ +SAL
Sbjct: 354 KLADDEPLKIRTHRALARLFERLGESDKAAQHYRESAL 391


>gi|190892419|ref|YP_001978961.1| exported protein, TonB-dependent receptor [Rhizobium etli CIAT 652]
 gi|190697698|gb|ACE91783.1| putative exported protein, TonB-dependent receptor [Rhizobium etli
           CIAT 652]
          Length = 1226

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 83/262 (31%), Gaps = 10/262 (3%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y A+     +    N   A ++      +    +  L  +   Q+A          E +E
Sbjct: 333 YGAIMQAYTAGFLENPRAALEIIKKAE-RRYPDDPTLPAV-RAQLAQLIDDRQQMKEAIE 390

Query: 145 MMLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
             L   P      +  + Y  +    D++ A      A++++P       ++        
Sbjct: 391 RSLALDPDHPMALSARAEYKAAY-ESDIDGALADLNHAIELAPGDSGALNSLGLLQSSR- 448

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               A     +  K A E +    +L    ++   D+  M  +  +   ++ L  +  +A
Sbjct: 449 ---DANGEAEKAFKRAIELDPQDPLLHANLAMLYLDQSRMKEAKREIDTAIALDPSFDIA 505

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI-N 321
            +   +  +   ++ K+   L      NP    + +           ++     L+    
Sbjct: 506 LLVRGRYYLQSGERDKSLEDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADR 565

Query: 322 KESVESLVIVSKIALEMGSIDQ 343
            ++ +  +   + A+++   D 
Sbjct: 566 LDNNDPAISAFRTAVDIDDYDA 587


>gi|94970032|ref|YP_592080.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552082|gb|ABF42006.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 1096

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 100/301 (33%), Gaps = 48/301 (15%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
           +  G+ AL        A ++  A  +  Y  Q      + L      Q+ + + +Y+ A 
Sbjct: 702 HKYGWDALAETYY--NAGDLNKA--IEYYKKQLEVNPYDDLANTGLAQVYMTQYKYDDAL 757

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
              +   +I    + A   +        D  +A     +A+ I P +      +   Y+ 
Sbjct: 758 AAFKKQAEINPLDKTAHLGIGQVDIIREDYKAAVPELERAVSILPQSSVARYMLGNAYLN 817

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHD----------- 248
             +  +AIT   +  K   + N       IA +L + D K D    Y             
Sbjct: 818 TGQTEKAITAFEESVK--LDANNPMTWNDIAYALADKDVKLDKAEQYAQSSVSTTQSYLR 875

Query: 249 ---AIESLKLCDNSIMASICAAK------SLISQNKKRKAEVILEKIWKVNPHPEIAN-- 297
              A ++LK        +  AA           Q K+++AE  +   +  +PH E+A   
Sbjct: 876 NLPAEQALKAGPQMT--ASLAAAWDTLGWVYYKQGKQKEAEEFIHAAFDQDPHSEVAEHL 933

Query: 298 -IYTH---------------LLSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGS 340
            I+                 L  +    + + + + L  I    VE+ +  +K+ L+   
Sbjct: 934 AIFAEKRNDKKAAAEYYAMALAGDRPAPRYREKLITLASIKDADVEAKIKEAKVKLDAER 993

Query: 341 I 341
            
Sbjct: 994 F 994



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 39/269 (14%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAV 157
           +  +A            F           Q A+    Y  A E L   ++  P  +    
Sbjct: 657 DASVAG-AEKDAKADDLFD--------AAQAAVRAENYQNAIELLQRALVLEPEHKY-GW 706

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L       GDLN A  Y  K L+++P        + Q Y+   ++  A+    ++   
Sbjct: 707 DALAETYYNAGDLNKAIEYYKKQLEVNPYDDLANTGLAQVYMTQYKYDDALAAFKKQ--- 763

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E N       +     +  + D  A+  +   ++ +   S +A      + ++  +  
Sbjct: 764 -AEINPLDKTAHLGIGQVDIIREDYKAAVPELERAVSILPQSSVARYMLGNAYLNTGQTE 822

Query: 278 KAEVILEK----------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
           KA    E+           W      +IA         +   KL +A +  + +  + +S
Sbjct: 823 KAITAFEESVKLDANNPMTWN-----DIAYALA-----DKDVKLDKAEQYAQSSVSTTQS 872

Query: 328 LV--IVSKIALEMGSIDQAHAKAMLAMKI 354
            +  + ++ AL+ G   Q  A    A   
Sbjct: 873 YLRNLPAEQALKAG--PQMTASLAAAWDT 899


>gi|145628424|ref|ZP_01784225.1| HemY [Haemophilus influenzae 22.1-21]
 gi|144980199|gb|EDJ89858.1| HemY [Haemophilus influenzae 22.1-21]
          Length = 428

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|309972635|gb|ADO95836.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 428

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|145639986|ref|ZP_01795585.1| HemY [Haemophilus influenzae PittII]
 gi|145270952|gb|EDK10870.1| HemY [Haemophilus influenzae PittII]
 gi|309751633|gb|ADO81617.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 428

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 ILNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|152982745|ref|YP_001354815.1| hypothetical protein mma_3125 [Janthinobacterium sp. Marseille]
 gi|151282822|gb|ABR91232.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 598

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 103/275 (37%), Gaps = 7/275 (2%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRY 176
             L  LL  ++AL    + +A   + M++    TR    A  +    +     ++ A   
Sbjct: 69  PLLYKLLRAELALQRGDWQLA--YVSMLVTAQETRDPRLAERA-AKVALSAKQVSEALSA 125

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                +++P++    +  +   +L      A   L ++ + A    R   +L++      
Sbjct: 126 VRLWHELAPNSDEANQFYLGLIILGDNLKEARPILIERLRLASPQTR--GVLILEIQRLL 183

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           A+  D  A++    E      + +   +  A+S  ++N   +A        K+ P  E+A
Sbjct: 184 ANTKDKNAAFALLEEVTTPYQDLVETHLALAQSAFTKNDIARANSEAHIALKLKPDMELA 243

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +     + +    L+      + N ++ E  V  +KI ++    DQA  +    +K  P
Sbjct: 244 ALMVAQSTSSRAEALQILTDFIKANPKAREVRVAYAKILIDNKQYDQAREQFEQLLKDDP 303

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +    L    I  A +++      +  + L A+ D
Sbjct: 304 KDLTILYAMGILGAQTNDIPMAEKYLSAYLQALED 338


>gi|307718665|ref|YP_003874197.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306532390|gb|ADN01924.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 654

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 81/249 (32%), Gaps = 7/249 (2%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                  L    + + A  +  Y+ A E  +  +Q       A   L      +G    A
Sbjct: 16  LAGEETSLQLFRQGEEARIQEDYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVA 75

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
              A KA  + P +      ++    L       +    +  ++            +  +
Sbjct: 76  LAGAEKAKSLDPRSTDNH--LLYARCLLA--LGRLEEAERIYRDILSREPQNVEAGMGIA 131

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVN 290
             +  +G + ++  +   +L++           A     + ++ KA   LE+    +  +
Sbjct: 132 ELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRGERDKAASYLEEALRLYPSD 191

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P   +    +HL  E      + A R   +++ +VE+  +++++A   G   +A      
Sbjct: 192 PEVHLLAASSHLRKEEWDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDG 251

Query: 351 AMKIAPRKE 359
            +   P   
Sbjct: 252 FLGARPDSR 260



 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 78/303 (25%), Gaps = 62/303 (20%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           + YK L     S+  + + LA    +      +  N    +LL  +  LA  +   A   
Sbjct: 57  QAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTDN----HLLYARCLLALGRLEEAERI 112

Query: 143 LEM-MLQIPATREFAV--------YSLYFESCR-------------------------IG 168
               + + P   E  +              + R                          G
Sbjct: 113 YRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRG 172

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + + A  Y  +AL + P  P V       ++  +EW  A     +      E     + L
Sbjct: 173 ERDKAASYLEEALRLYPSDPEVHLLAASSHLRKEEWDEAEREARRAL-TLDENAVEASYL 231

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L   +     KG    +       L    +S          L   ++  ++     ++  
Sbjct: 232 LAQVATG---KGRFQEALDHLDGFLGARPDSREGWYLKGVILDRLDRPEESLRAFREV-- 286

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAK 347
                           ++ V +      L E     + E      + A       +A   
Sbjct: 287 -----------LERYPDDEVARYAMERILLERFPVSAPE------RRAAAGYHFTRAREY 329

Query: 348 AML 350
           A  
Sbjct: 330 AEK 332



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 7/190 (3%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +++ RAI    Q  +    + +         +      G    +   A ++  L   S 
Sbjct: 35  QEDYHRAIELYQQAIQKNPAFVQAYK----GLAEAYFSLGQYEVALAGAEKAKSLDPRST 90

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRL 317
              +  A+ L++  +  +AE I   I    P      +      L        L+   R 
Sbjct: 91  DNHLLYARCLLALGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERT 150

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
             +  E  + L I++ +    G  D+A +    A+++ P      LLA          D+
Sbjct: 151 LRMFPEHKKILTILAFLYEYRGERDKAASYLEEALRLYPSDPEVHLLAASSHLRKEEWDE 210

Query: 378 ILYWTQSALH 387
                + AL 
Sbjct: 211 AEREARRALT 220



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 67/185 (36%), Gaps = 10/185 (5%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
              +       ++ L  +  E   + D   +     ++++     + A    A++  S  
Sbjct: 11  LIVSPLAGEETSLQLFRQGEEARIQEDYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLG 70

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           +   A    EK   ++P     H   A     L       ++ R   +     ++VE+ +
Sbjct: 71  QYEVALAGAEKAKSLDPRSTDNHLLYARCLLALGRLEEAERIYR--DILSREPQNVEAGM 128

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
            +++++L  G +  A  +    +++ P  K+I  +LA + +          Y  + AL  
Sbjct: 129 GIAELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRGERDKAASY-LEEALRL 187

Query: 389 -MPDP 392
              DP
Sbjct: 188 YPSDP 192


>gi|319775356|ref|YP_004137844.1| HemY porphyrin biosynthesis protein [Haemophilus influenzae F3047]
 gi|329122647|ref|ZP_08251226.1| HemY protein [Haemophilus aegyptius ATCC 11116]
 gi|317449947|emb|CBY86159.1| HemY porphyrin biosynthesis protein [Haemophilus influenzae F3047]
 gi|327472661|gb|EGF18090.1| HemY protein [Haemophilus aegyptius ATCC 11116]
          Length = 428

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|120553421|ref|YP_957772.1| HemY domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120323270|gb|ABM17585.1| HemY domain protein [Marinobacter aquaeolei VT8]
          Length = 413

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 147/397 (37%), Gaps = 22/397 (5%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+R++    +  LV       +++    + I+ GN L  T+ +V L ++   +   + L 
Sbjct: 1   MIRVLLILLLALLVGTGLSLGLTYDLGYIRISLGNYLIETNFWVGLGLILVIILLTVTLI 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
              R F     ++   + + N  +  +    GL+++A  N P ARK+ S  +      + 
Sbjct: 61  NTVRRFRQGTGVMAGWIARGNERRARRRTTRGLLALAEGNWPRARKLLSSSASHA---DT 117

Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            L+  L   Q A     +    E L    +       AV  L     ++      Q  AT
Sbjct: 118 PLINYLAAAQAAFESGDHQAVDELLRKAFESTPGSSMAV-GLTQAQLQLAGNRPEQALAT 176

Query: 179 --KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILL 229
             +    SP  P+V + +   Y+  ++W      + + +K +        E  R     L
Sbjct: 177 LLRLRKESPHHPFVLKLLKNAYLRLEDWRELSRLIPELRKRSVVPESELNELERQVWQNL 236

Query: 230 IARSLE---NADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVI 282
           + ++ E    + K +  AS              +          A+ L     + +AE +
Sbjct: 237 LEQAAEECQRSRKENPEASLEPLTRLWDELPGFVRRDEYTIRDYARLLAGLGDEAQAETL 296

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           L K+ + +   E+ N+Y  +  ++   +L  A +  +    + E L+ + +++L      
Sbjct: 297 LRKVLRNHWSDELINLYGRIQGQDPEEQLLIAEQWLKHRTNNPELLLALGRLSLRNELWG 356

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           +A      ++K+   +E    L+++          I 
Sbjct: 357 KAREYFETSLKLRRNRETLAELSRLNAHMGEEEASIK 393


>gi|319897797|ref|YP_004135994.1| hemy porphyrin biosynthesis protein [Haemophilus influenzae F3031]
 gi|317433303|emb|CBY81678.1| HemY porphyrin biosynthesis protein [Haemophilus influenzae F3031]
          Length = 428

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GIARFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|78355835|ref|YP_387284.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218240|gb|ABB37589.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 866

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 65/199 (32%), Gaps = 7/199 (3%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             G+          AR++     Q+       L  L    +     +Y+ A +     L+
Sbjct: 671 SLGVCMAGLGRHSEARRLFGEALQRDRRDVMTLYNL--GHVCQNMGEYDEARQYYRKCLK 728

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                 FA+  L   + +      A++Y  +A  +          + +  +       A 
Sbjct: 729 YDKEHVFALLRLGQMAEQEKKFGPARQYYNRAARLDGAQALTWRNLARLCMRQGRPDEAR 788

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAA 267
             L+Q   +        AI L   +    + GD    +   A +++ L        +  A
Sbjct: 789 EHLHQALIHNP----QDAISLQLLARLYLEGGDDPEVASVLARQAVALRPELKAGWLDLA 844

Query: 268 KSLISQNKKRKAEVILEKI 286
           ++L +  ++R+A   L + 
Sbjct: 845 RALEATGRQREAAEALSRA 863



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 63/226 (27%), Gaps = 37/226 (16%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD  +A      AL    +      ++          S A     +  +     +R  
Sbjct: 644 SQGDTFAAIEEYKLALLADENNTMAWNSLGVCMAGLGRHSEARRLFGEALQR----DRRD 699

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + L        + G+   +     + LK     + A       L+   +  + E     
Sbjct: 700 VMTLYNLGHVCQNMGEYDEARQYYRKCLKYDKEHVFA-------LLRLGQMAEQEK---- 748

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K  P    A  Y      N   +L  A  L   N         ++++ +  G  D+A 
Sbjct: 749 --KFGP----ARQY-----YNRAARLDGAQALTWRN---------LARLCMRQGRPDEAR 788

Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                A+   P       LLA++      +  ++         A+ 
Sbjct: 789 EHLHQALIHNPQDAISLQLLARL-YLEGGDDPEVASVLARQAVALR 833


>gi|16272545|ref|NP_438760.1| HemY [Haemophilus influenzae Rd KW20]
 gi|260581416|ref|ZP_05849229.1| hemY protein [Haemophilus influenzae RdAW]
 gi|1170236|sp|P44772|HEMY_HAEIN RecName: Full=Protein hemY homolog
 gi|1573594|gb|AAC22260.1| hemY protein (hemY) [Haemophilus influenzae Rd KW20]
 gi|260091910|gb|EEW75860.1| hemY protein [Haemophilus influenzae RdAW]
          Length = 428

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GVTRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173
           ++ L++  + A        A+  L     I AT      +L  E        +   L +A
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +      L+++     V +  V+ Y+     S+A   L++
Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208


>gi|183238963|gb|ACC61051.1| tetratricopeptide repeat domain protein [uncultured bacterium]
          Length = 968

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 66/237 (27%), Gaps = 10/237 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q  L       A E  E  L+    +  A+  L   +      + A   + +A+   P
Sbjct: 182 RGQAYLGLGDPAKAKEAFEQALKAQPGQLDALLGLARLAQADKHDDDATALSGQAIAQHP 241

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                            + + A+   ++      +         + ++     +G    +
Sbjct: 242 KDAEAYYFKGLLLKSRGQAAPALAAFDEALALKPDHR----TAHLEKAYLEIMQGKFEPA 297

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH 301
             D   + K   +S+M     A    SQ K + A      +L       P   +A   T 
Sbjct: 298 QTDIAAARKTAPDSLMVIYTQALLDYSQGKFKAANDGLLKVLRVAPDHMPTVLLAGA-TQ 356

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           L   +     K   +  E          +++ I L         A  +  +   P +
Sbjct: 357 LKLGSLAQAEKHLQKYVEFAPGDPYGRKLLATILL-QEKRPNDAAAVLAPLLKQPTQ 412



 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 69/243 (28%), Gaps = 15/243 (6%)

Query: 122 VYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
             L +      +     +  + +    Q P   E  +  L      +GD  SA++   KA
Sbjct: 78  ALLSDAAKFQQKGDSKGSLIQWKNASAQEPNNAEARLR-LGKLYNDMGDPVSAEKELRKA 136

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             +   A     A+ Q  +   ++  A+                    L  R       G
Sbjct: 137 SSLGAPASATLPALAQALLAQGKFQMALDETQAATAKGDAAA------LSVRGQAYLGLG 190

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY- 299
           D   +     ++LK     + A +  A+   +      A  +  +   +  HP+ A  Y 
Sbjct: 191 DPAKAKEAFEQALKAQPGQLDALLGLARLAQADKHDDDATALSGQA--IAQHPKDAEAYY 248

Query: 300 ----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                          L        +  +   + +  + + +  G  + A      A K A
Sbjct: 249 FKGLLLKSRGQAAPALAAFDEALALKPDHRTAHLEKAYLEIMQGKFEPAQTDIAAARKTA 308

Query: 356 PRK 358
           P  
Sbjct: 309 PDS 311



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 4/159 (2%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A     A    +     H      +  L   + ++A +QY  A ++ E +L+I      
Sbjct: 799 GAGQQKDADARLAQWQAAHPAD--VVTLLYLAESSMAGKQYKNAIKQYEAILKIDPANTI 856

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+ +L +   +  D   A     +AL ++P      + +    V     +R +  L Q  
Sbjct: 857 ALNNLAWAYYQEKD-ARALATGEQALRLNPKGAATLDTLGWMLVEQGNLTRGLPMLKQAV 915

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
             A +    R  L  A +  + DK    A     + S K
Sbjct: 916 ALAPDAPELRFHLASAMNK-SGDKAGARAELEKLLASNK 953


>gi|332971036|gb|EGK10007.1| HemY protein [Kingella kingae ATCC 23330]
          Length = 398

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 122/384 (31%), Gaps = 16/384 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M +LI    + ++ I   +  + Y  +V I     + R +  + +  L   + A  ++  
Sbjct: 1   MKQLIWIIVLFAIAIGLALAATTYSGNVYIVIEQTMLRVNLHLFVLGLIGAVVALYIVVK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119
           +    LS P  L      R   K  +AL    ++        A    + V        N 
Sbjct: 61  LFAGVLSTPDKLSRFGIGRRSRKATQALNAAGLAFFEGKFQEAETQAAKVLANKEAGGNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  +L    A          + L  + ++P+  + + Y L  E +        A  +  
Sbjct: 121 VLALMLAAHAADQSGNQKTRDQYLHDIAKLPSKAQLSRYLLLAESALNQHQYEIADEHLK 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLEN 236
            A  I+P    +    ++  +   +   A+  L++  K + A   N   A  L  R+ E 
Sbjct: 181 AAAQINPRLTRLVRLQLRWALDKGD---ALEVLDKVDKLRRAGAMNDTEAEHLSQRAYEQ 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA---SICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                       A   LK     + +   S   A+  +      +A   + + +    + 
Sbjct: 238 LLNLVSDNRGMKAC--LKRIPEHLKSGEMSATIAQKYVQLGLYSQAIAWVNQHYPAQHNA 295

Query: 294 EIANIYT----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           ++   +     +L        +  A      N      L  + ++A       +A     
Sbjct: 296 DLLPAFVQSSQYLDEHGQQKAIDTADAWLRSNPNDARLLRHLGELAATRQLWGKARGYLE 355

Query: 350 LAMKIAPRKEIFLLLAQIEQANSH 373
            ++ I       L LA++ + +  
Sbjct: 356 ASLAIEHSVPAHLTLAKVLEQSGQ 379


>gi|240949411|ref|ZP_04753752.1| HemY-like protein [Actinobacillus minor NM305]
 gi|240296160|gb|EER46816.1| HemY-like protein [Actinobacillus minor NM305]
          Length = 416

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 74/205 (36%), Gaps = 15/205 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   + +   ++ +   V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLVLAALIAGPYLAGHQGYVRIETDTKVIEMSLVMLVVFFVSAMAVLYAVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K     LM ++  +   A K+ S  ++     +E 
Sbjct: 61  AITRFFRLSKGSYDWFFNRKQKKAQKETLEALMRMSEGDYSKAEKLFSKNAKHA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSA 173
           ++ L++  + A        A++ L     I A++   + ++  E  R       G L +A
Sbjct: 118 VLNLIKAAEAAQQRGDDFEANKYL-----IEASKLGGMNNVAVELARAKILVQQGKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQY 198
           +      L+++P+   V    ++ Y
Sbjct: 173 RSAIDSLLELAPNNTEVLRLAIRIY 197


>gi|253698929|ref|YP_003020118.1| hypothetical protein GM21_0276 [Geobacter sp. M21]
 gi|251773779|gb|ACT16360.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 624

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 108/298 (36%), Gaps = 16/298 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              AR+  + + +Q    +   V        LA      A    E  L+        +Y+
Sbjct: 288 SKAAREYEALLLKQ---PDAPGVREKLGDALLAAGHDGEAIAAYEEALRRKEGSSAVLYN 344

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R GDL+ A R  ++A+ + P+       + + + +  + + AI     + +   
Sbjct: 345 LGTLYERKGDLDQAMRRFSEAIRLDPEYGDARRRLAEIHSVRGDLNAAI----AQYRELV 400

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             + +  +     +           +     ++++L  +S +A    A+  + + +  +A
Sbjct: 401 SRHGDNPLSYYKLARLYEQGRQYADAIAAYSKAIELDQDSEVAHQGIARLYLKRKQAEEA 460

Query: 280 EVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           E  L ++ +++P H E    + ++Y      +   KL       E+N +S      +  I
Sbjct: 461 EKHLLEVLRLDPKHAEARELLISLYVKARRYDDTEKL--LKASAELNPDSANDQYRLGVI 518

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               G+ D A  +   A+++ P        L ++        +K      +A  A PD
Sbjct: 519 YAFRGNNDGAREQYQKALELKPDHARALNALGKLYLRLGQ-KEKAREALAAARKADPD 575



 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 6/194 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A   +  +  +H   +  L Y    ++    RQY  A       +++    E A 
Sbjct: 387 GDLNAAIAQYRELVSRH--GDNPLSYYKLARLYEQGRQYADAIAAYSKAIELDQDSEVAH 444

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +     +      A+++  + L + P      E ++  YV A+ +      L    + 
Sbjct: 445 QGIARLYLKRKQAEEAEKHLLEVLRLDPKHAEARELLISLYVKARRYDDTEKLLKASAEL 504

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +   ++  L +  +     +G+   +     ++L+L  +   A     K  +   +K 
Sbjct: 505 NPDSANDQYRLGVIYA----FRGNNDGAREQYQKALELKPDHARALNALGKLYLRLGQKE 560

Query: 278 KAEVILEKIWKVNP 291
           KA   L    K +P
Sbjct: 561 KAREALAAARKADP 574



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 84/263 (31%), Gaps = 18/263 (6%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF-AVYSLY 161
           +++ +    +    +    + L+       ++   A ++    + + P   E      L 
Sbjct: 52  QRLEAEKKVEKLCADGGAAHYLKGLALETAQRQEEAVDEYRTAVKKEPKLAEAHGRLGLL 111

Query: 162 F-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E     + +     A+KA      A     A+   +  A+ ++ A++   Q       
Sbjct: 112 LFEKGAREEASVELFEASKANADPAYAR----ALGDIFQAAQLYALALSQYQQAL----P 163

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                A L +  +      G+   +    IE+L+L   ++ A +  A       + ++A 
Sbjct: 164 QYGKDAKLRVGMARSYLGFGERAKARDLLIEALRLDPANLPARLELAGIYKGDKRYQEAL 223

Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             L +    +P     H  +A +   +  E       R   +E       E  +  + + 
Sbjct: 224 EQLRQASASHPEDRDVHFRLARLLDLMGEEKLADAQYRQAGMERAAS--PEEHLKKAALY 281

Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358
            +  +  +A  +    +   P  
Sbjct: 282 RQGTAFSKAAREYEALLLKQPDA 304


>gi|148678797|gb|EDL10744.1| cDNA sequence BC023818 [Mus musculus]
          Length = 569

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 213 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 272

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 273 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 328

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 329 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 383

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     E  + ++++   MG   +A       +   PR  E + L
Sbjct: 384 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 443

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H   K L   + AL     DP
Sbjct: 444 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 472


>gi|83718445|ref|YP_441430.1| HemY protein N-terminus family protein [Burkholderia thailandensis
           E264]
 gi|167618305|ref|ZP_02386936.1| HemY protein N-terminus family [Burkholderia thailandensis Bt4]
 gi|257139894|ref|ZP_05588156.1| HemY protein N-terminus family protein [Burkholderia thailandensis
           E264]
 gi|83652270|gb|ABC36333.1| HemY protein N-terminus family [Burkholderia thailandensis E264]
          Length = 396

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 124/398 (31%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S    +  +     A   L  
Sbjct: 3   LRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   ++ + +L   L ++ A     A K               
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQAAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
            +       A A  + +    + E + ++          L     R    D   A     
Sbjct: 123 SLI-----AAAATHRMHEYARRDEWLAKVNGQEWQDARLLATADMRADGRDAEGALAALA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K WS  +    +  +  +  +   A+ L  ++ E+  
Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWSEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236

Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D   ++  +     + +        +  AA+ LI+  ++++A  I+E     N +
Sbjct: 237 RDRRHDADALLEVWQTLSATERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A        +  + L  + ++  +     +A +    A+
Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +          ++ +SAL
Sbjct: 354 KLADDEPLKIRAHRALARLFEHLGETDKAAQHYRESAL 391


>gi|269961755|ref|ZP_06176115.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833538|gb|EEZ87637.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 391

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +A    + A +  E +++ P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +V  Y   +EW +AI + NQ  
Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168

Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K  K+  R RA +       ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGKKRTRIRANIAHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRIYLE 228

Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
                   +    +LE  K +  +  P IA  Y HL  E+ + +  RA   ++       
Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
           S ++++++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|120586927|ref|YP_961272.1| TPR repeat-containing protein [Desulfovibrio vulgaris subsp.
           vulgaris DP4]
 gi|120564341|gb|ABM30084.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
          Length = 886

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 14/262 (5%)

Query: 102 LARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           LA++  +   Q+         ++   + +     +A      A    E  L +      A
Sbjct: 342 LAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPA 401

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L       G  + A      A+  +PD   V  A+   ++   +  + +  + +  +
Sbjct: 402 LLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNALFAYHLGRGDTGKGVQVVLEGLR 461

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                    AIL         + GD   +     ++ +   +   A +   +      + 
Sbjct: 462 GTP----QDAILYTMLVPVYVNMGDEAKALDAVAQAHRADPDFPDAYLAGLRLHAGAGRA 517

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333
            +A    E      P  P        LL     T     R  +   +          V++
Sbjct: 518 EQALAESEAYLARKPDAPGFLLASGALLDLLGRTAEADARFDK--ALAANDPRVSFAVAE 575

Query: 334 IALEMGSIDQAHAKAMLAMKIA 355
            A+  G  ++A +    A++  
Sbjct: 576 RAVASGQDEKARSVLEEALRQH 597



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 23/273 (8%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPAT 152
           ++A+     AR +     +QH      L   L +Q+A    + + A      +  Q P  
Sbjct: 577 AVASGQDEKARSVLEEALRQH--DQTTLRDALAIQLARM-GKPDDALALYTAIETQRPRE 633

Query: 153 REFAVYSLYFESCR-IGDLNSAQRYAT-KALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                Y L     R     ++A+     ++    P                      +  
Sbjct: 634 ALLGRYRLLTHLDRHQEAADTARELGRRESASPLPVLLEAAAFERMGQRPQG-----VAL 688

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L    + + +       LL+A        GD   +     ++LK   + +   +  A   
Sbjct: 689 LEAAHRKSGDPE-----LLLAMGGMLERNGDEARAETCYRDALKARPDHVPTLLAYAGLD 743

Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI--NKE 323
           + + +  KA  + EK   + P        +A  Y    S +   +    L L+      +
Sbjct: 744 MRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQAYTRAPD 803

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +   L  +    +  G  D A      A+   P
Sbjct: 804 NPAVLDTLGVCMMANGRADDAARAFGRAVVAVP 836



 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 22/310 (7%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIP 150
           +   A     A         +    +     L    +     +   A  + +  L    P
Sbjct: 510 LHAGAGRAEQALAESEAYLARK--PDAPGFLLASGALLDLLGRTAEADARFDKALAANDP 567

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                    +   +   G    A+    +AL    D   + +A+  Q     +   A+  
Sbjct: 568 RVSFA----VAERAVASGQDEKARSVLEEALRQH-DQTTLRDALAIQLARMGKPDDALAL 622

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                   +      A+L   R L + D+     +   A E  +    S +  +  A + 
Sbjct: 623 YTA----IETQRPREALLGRYRLLTHLDRHQ--EAADTARELGRRESASPLPVLLEAAAF 676

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESL 328
               ++ +   +LE   + +  PE+      +   + +            +   + V +L
Sbjct: 677 ERMGQRPQGVALLEAAHRKSGDPELLLAMGGMLERNGDEARAETCYRDALKARPDHVPTL 736

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH--NTDKILYWTQ 383
           +  + + +      +A A    A+ IAP   +    L +A +E+A+        +    Q
Sbjct: 737 LAYAGLDMRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQ 796

Query: 384 SALHAMPDPL 393
           +   A  +P 
Sbjct: 797 AYTRAPDNPA 806



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 101/340 (29%), Gaps = 31/340 (9%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A     +A    PD P    A ++ +  A    +A+           +      +
Sbjct: 481 GDEAKALDAVAQAHRADPDFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGF--L 538

Query: 228 LLIARSLENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           L     L+   +     +    A+ +     +        A+  ++  +  KA  +LE+ 
Sbjct: 539 LASGALLDLLGRTAEADARFDKALAANDPRVSFA-----VAERAVASGQDEKARSVLEEA 593

Query: 287 WKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            + +    +  A              L     +E       E+L+   ++   +    +A
Sbjct: 594 LRQHDQTTLRDALAIQLARMGKPDDALALYTAIETQRP--REALLGRYRLLTHLDRHQEA 651

Query: 345 HAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402
              A    +      + +LL  A  E+         L   ++A     DP  +   G + 
Sbjct: 652 ADTARELGRRESASPLPVLLEAAAFERMGQRPQGVAL--LEAAHRKSGDPELLLAMGGML 709

Query: 403 SVW--LPLSPISKTLCYFEWKIPTKSPEYIS-----------SENINFSLEMAYPADDLQ 449
                   +         +   P   P  ++           ++      +    A D  
Sbjct: 710 ERNGDEARAETCYR-DALK-ARPDHVPTLLAYAGLDMRRKEYAKATALYEKAVSIAPDDV 767

Query: 450 SMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGI 489
             LNN    +L    + ++ + +    L  + R PD+P +
Sbjct: 768 VALNNLAMAYLEKASRDATPQKALRLALQAYTRAPDNPAV 807


>gi|261495985|ref|ZP_05992400.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308361|gb|EEY09649.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica
           serotype A2 str. OVINE]
          Length = 414

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 17/202 (8%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             ++ L+      ++     V I     +   S  +++      +    LL  +      
Sbjct: 3   LLLVGLISG--PYLAGNQGYVRIETATTVIEMSIVMLVVFFVLAMAVVYLLEWIVTKICR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  N   A K+ S  ++     +E ++ L++ 
Sbjct: 61  MSNGAYNWFSTRKHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSAQRYATKA 180
            + A        A++ L     I AT      ++  E  R       G L +A+      
Sbjct: 118 AEAAQQNGDDLAANKYL-----IKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSL 172

Query: 181 LDISPDAPWVTEAVVQQYVLAK 202
           L+++P +  V    +Q Y  ++
Sbjct: 173 LELAPHSDEVLRLAIQIYKESR 194



 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 12/134 (8%)

Query: 186 DAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                 +  ++    +    +S+A    ++  K+A E      + LI  +      GD +
Sbjct: 73  KHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHADEP----VLNLIKAAEAAQQNGDDL 128

Query: 244 ASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA-N 297
           A+    I++ ++   N++   +   + L+ Q K   A   ++ + ++ PH +    +A  
Sbjct: 129 AANKYLIKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQ 188

Query: 298 IYTHLLSENTVGKL 311
           IY    +   + +L
Sbjct: 189 IYKESRAYVALDRL 202


>gi|238918083|ref|YP_002931597.1| protoheme IX biogenesis protein [Edwardsiella ictaluri 93-146]
 gi|238867651|gb|ACR67362.1| HemY protein, putative [Edwardsiella ictaluri 93-146]
          Length = 399

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/391 (14%), Positives = 119/391 (30%), Gaps = 21/391 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML+++  F ++   I    +++ +   V I   +    TS   ++ +L   + A   L  
Sbjct: 1   MLKVLLLFIILIAGIVLGPMLAGHQGYVLIQTDSYNIETSVTSLVIMLILLMLALFALEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  L   A        R   +  +    GL+ +   +     K+ +  +         
Sbjct: 61  LLRRLLRTGARTRGWFIGRKRTRARRQTCAGLLKLTEGDYGQVEKLLARNADHA--DQPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172
           + YLL  + A        A++ LE   +        +  TR              G+ ++
Sbjct: 119 VNYLLAAEAAQQRGDELRANQYLERAAEVAGSDPLPVDITRV-------RLQLARGENHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAIL 228
           A+      L+ +P  P V     Q Y+    +   +  L    K       +  + +   
Sbjct: 172 ARHGVDALLNYAPRHPEVLRLAEQAYLRTDAFGPLLEILPALAKQGLHSDDDIEKLQIRA 231

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I    +    G             +   +  +  +  A+ LI  +    A+ I+    K
Sbjct: 232 YIGLMDQAMANGGSEELKQWWKAQRRTTRHETVLQVALAEHLIECDDHGAAQQIVVDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +  +   L S N     K   +    +  S      + ++ +  G   QA    
Sbjct: 292 RRFDERLVQLMPQLKSGNPEQLEKLLQQQIRQHGASALLNSTLGQLLMRHGEWQQAAEVL 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             A+K  P    +  LA          +   
Sbjct: 352 RAALKQRPDPYDYAWLADTLDKLHRPEEAAQ 382


>gi|115482752|ref|NP_001064969.1| Os10g0498600 [Oryza sativa Japonica Group]
 gi|113639578|dbj|BAF26883.1| Os10g0498600 [Oryza sativa Japonica Group]
          Length = 428

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 89/300 (29%), Gaps = 43/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  E+ +        ++ +     P      + S   E    GD+ +A+    +A    
Sbjct: 60  AAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMS-AKEKWLAGDVPAARAILQEAYASL 118

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P++  +  A  +      E  RA   L++ ++            ++ R L N D+     
Sbjct: 119 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEE---- 174

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                 E LKL  +     +   +         KA+ + E   K  P      +    L 
Sbjct: 175 -RKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLE 233

Query: 305 ENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           E   G  K    L    + N  + E  +   +  L  G+  +A A    A++  P   I 
Sbjct: 234 EKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGIL 293

Query: 362 LLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMPD 391
              A                I++ +                   DK   W   A+   PD
Sbjct: 294 WAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPD 353


>gi|307546842|ref|YP_003899321.1| porphoryin biosynthesis protein HemY [Halomonas elongata DSM 2581]
 gi|307218866|emb|CBV44136.1| K02498 HemY protein [Halomonas elongata DSM 2581]
          Length = 417

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 127/383 (33%), Gaps = 28/383 (7%)

Query: 1   MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M +LI    V   +      ++   P    +  G+  ++T+ +  L +L+        L 
Sbjct: 1   MRKLILIVVVGLAIGALLGQLIMSVPGYWLVRVGDTSFQTTFWFGLVLLFAAFVVLHFLL 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +        +       +       +    GL+++A      A K     +   +    
Sbjct: 61  RLLMRLSRPVSRFKGWSSRSRNRSAMRRTVRGLVALAEGRWKRAEKALVKAADDSS---T 117

Query: 120 YLVYLLEVQ-IALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFES---CRIGDLNS 172
            LV  L     A  + +Y  A   L+      +   T          ++           
Sbjct: 118 PLVNYLSAALAAHYQGRYEQADTLLKRAHLSTEGADT-AVG----MMQAQLMLDRQQYEE 172

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRN 224
           A    T+     P+ P V + + Q Y+   +W      + +        +++  +   R 
Sbjct: 173 ALAILTRLDRHLPNHPQVLKQLKQAYLSVSDWEGLRRLMPRLGAQQLISQEEREQLEQRA 232

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L+   + E  D   +   + D  + L+   + I   +   ++L+  +++  AE +L 
Sbjct: 233 YRELIAQEAREAGDIEQVRTLWADMPDHLRGNVDLI---VLYVEALVRGDQQAIAERLLR 289

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +  K +    +   Y  LL  +   +L  A +  +      + L+ + +++L      +A
Sbjct: 290 QSLKDHWDSRLILRY-GLLEVDAARQLVVAEKWLQERPNDPDLLLTLGRLSLRNAYWGKA 348

Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367
                 + +  P   +   LA++
Sbjct: 349 QEYFEASHRQRPSGVVCAELARL 371


>gi|254498738|ref|ZP_05111454.1| truncated protoporphyrinogen IX and coproporphyrinogen III oxidase
           HemY [Legionella drancourtii LLAP12]
 gi|254352066|gb|EET10885.1| truncated protoporphyrinogen IX and coproporphyrinogen III oxidase
           HemY [Legionella drancourtii LLAP12]
          Length = 315

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 90/264 (34%), Gaps = 9/264 (3%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
               L YL   + A       +  +    E    +P  +     +             A 
Sbjct: 36  DTPLLNYLTAARAAQKMGDSQL-RDDFLREAQQSMPEAKIAVELTQAQLQLANHQWEQAL 94

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---RAILLIA 231
                  DI+P  P+V + ++Q Y   ++W + I  L   KK     +            
Sbjct: 95  ATLRHLHDIAPRHPYVLKLLMQLYQEVRDWPQLIALLPDLKKYNVMDHAEFESLQHNAYL 154

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVN 290
           ++L +  K +   +      SL     +        A+ L+  N    A+ +L +  + +
Sbjct: 155 QALTDLVKQNQSGAVTTLFHSLPKSLATDPNIVAEYARFLLKNNDNTTAKDLLRRSLRKD 214

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            HP++  +Y  L S+    +L  A  L + +  S    + + ++ ++     +A      
Sbjct: 215 FHPQLIALYGRLPSDE--KQLVFAESLLKKHSHSAALYLCLGQLCIKQQLWGKAKHYLEQ 272

Query: 351 AMKIAPRKEIFLLLAQIEQANSHN 374
           + ++ P    +L L ++ +     
Sbjct: 273 SNELEPSPLAYLTLGKLHEKLGDP 296


>gi|71908057|ref|YP_285644.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71847678|gb|AAZ47174.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Dechloromonas aromatica RCB]
          Length = 923

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 94/271 (34%), Gaps = 13/271 (4%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGD 169
           +           L+ Q +   + +  A  KL+ +L+      T    +        R   
Sbjct: 260 RKIAPKHPQTLYLDAQASYQRKDFQGARSKLQDLLKFNTNNPT-ALQLAGAVEFQLRS-- 316

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A+ Y  KAL  +P+       +V  Y+   + ++A+  L      A       + LL
Sbjct: 317 YMQAETYLNKALSQAPELRLARRILVATYLRNGQAAKALNTLQPMLDKADT----DSALL 372

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
                     GD   +     ++ KL  N        A + ++Q     A   LE+I + 
Sbjct: 373 TLAGETYLQNGDAKKAEEYFAKASKLDPNDPGKKTSIALTHLAQGDVSGAVEDLEQIAQT 432

Query: 290 NP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           +     ++A I T + +      LK    LE+   ++  +  + ++  L    +  A + 
Sbjct: 433 DKGVRADLALISTFIRTNQADKALKAIDSLEKKQPDNPATHNLRAQTLLLKKDLAGARSS 492

Query: 348 AMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
              A+KI P        LA+I+ A     D 
Sbjct: 493 YEAALKINPAFFPAAASLAKIDLAEKKPDDA 523



 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 87/279 (31%), Gaps = 34/279 (12%)

Query: 87  ALYTGLMSI---AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           AL T L++       + P                 E+L                   +  
Sbjct: 11  ALTTALLAAFLGGCGDSP---------ESLIASSREFLAK---------NDNKAAVIQLK 52

Query: 144 EMMLQIP---ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
             + Q P     R     +L       GD   A+    KA D+       T  + +  + 
Sbjct: 53  NALQQNPSLGEARFLLGKTL----LETGDAAGAEVELRKAQDLKYSPEQTTPLLAKAMLG 108

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A +   A   +++  K       + A L    S+    +G+  A+     ++LK   +  
Sbjct: 109 AGQ---AKKLIDEFGKTDSLSGESLAALKTTLSVAYLIQGNQDAAQSALSDALKAQPDFA 165

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRL 317
            A +  A+S ++      A+ ++ ++ + NP  H   + N     +       L    + 
Sbjct: 166 PALLSLARSKVTNRDIDGAQALVAQVLEKNPKNHDALLLNGSLQGVKSGPEAALAEYRKA 225

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            E   + +     +     +    D+A  +     KIAP
Sbjct: 226 IEAKPDFIAGHAALITTLFQQQKFDEASTQLDALRKIAP 264



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 7/165 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A+ N   A +M +   ++H      LV+  +  +A A + Y++A +     L I     
Sbjct: 753 LASGNPQEAGRMAAAWQKEHPKDIALLVH--QGDVATARKDYSLAAQHYRQALDIQPNNA 810

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             + +L + S  +     A  YA KA  ++P  P   + +        E  RAI  L   
Sbjct: 811 LVLNNLAWVSGELKAP-KAIEYAEKANQLAPGQPQFMDTLAMLLAQKGETKRAIDLLRNA 869

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              A      +    +  +      G+   +  +     KL D  
Sbjct: 870 MNAAPNAASIQ----LNLAKVLISAGEKKEARKELEALAKLGDKF 910



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 70/219 (31%), Gaps = 22/219 (10%)

Query: 86  KALYTG---------LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
           KAL            L++    N   A+ +++          +  +  L  +  L     
Sbjct: 326 KALSQAPELRLARRILVATYLRNGQAAKALNTLQPMLDKADTDSALLTLAGETYLQNGDA 385

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ----RYATKALDISPDAPWVTE 192
             A E      ++         S+       GD++ A     + A     +  D   ++ 
Sbjct: 386 KKAEEYFAKASKLDPNDPGKKTSIALTHLAQGDVSGAVEDLEQIAQTDKGVRADLALIST 445

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +           +AI  L +K+ +    +  RA  L+        K D+  +      +
Sbjct: 446 FIRTNQADKA--LKAIDSLEKKQPDNPATHNLRAQTLLL-------KKDLAGARSSYEAA 496

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           LK+      A+   AK  +++ K   A+   E +   +P
Sbjct: 497 LKINPAFFPAAASLAKIDLAEKKPDDAKKRFENVLLADP 535



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 95/291 (32%), Gaps = 37/291 (12%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A ++  A   ++ ++         L  +    + LA +  + A + L+  L+I +    A
Sbjct: 620 AGDLNQALASYTKLAALQ--PASPLPLVRTADVHLANKNKDEAAKSLKKALEIKSDLVEA 677

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L   +      N A + A +     P            +  +K W+ A        K
Sbjct: 678 QRGLILLALDAKKPNEALQIAQQIEKQRPKEAVGFALEGDIHATSKNWTEAANAYRNAIK 737

Query: 217 NAKEWN---RNRAILLIA--------RSLENADK-----------GDMIASYHD---AIE 251
            A   +   +  ++LL +         +     +           GD+  +  D   A +
Sbjct: 738 RAGSADIAIKLHSVLLASGNPQEAGRMAAAWQKEHPKDIALLVHQGDVATARKDYSLAAQ 797

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENT 307
             +   +    +     +L   + + KA   +E   K N      P+  +    LL++  
Sbjct: 798 HYRQALDIQPNNALVLNNLAWVSGELKAPKAIEYAEKANQLAPGQPQFMDTLAMLLAQKG 857

Query: 308 VGKLKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKI 354
               KRA+ L      +  +     + ++K+ +  G   +A  +     K+
Sbjct: 858 ET--KRAIDLLRNAMNAAPNAASIQLNLAKVLISAGEKKEARKELEALAKL 906



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 90/285 (31%), Gaps = 9/285 (3%)

Query: 103 ARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           A K    +   +    +    + L  Q  L ++    A    E  L+I      A  SL 
Sbjct: 452 ADKALKAIDSLEKKQPDNPATHNLRAQTLLLKKDLAGARSSYEAALKINPAFFPAAASLA 511

Query: 162 FESCRIGDLNSAQRYATKALDISPDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                    + A++     L   P + P +      +             + +   +   
Sbjct: 512 KIDLAEKKPDDAKKRFENVLLADPKSVPALLALAELKAANKGSVDEVAGLIGKAITSNPT 571

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
               R  L+    L   +    + + +DA  ++K     I A     +     N+   + 
Sbjct: 572 EISPRLALIQYY-LSQKETKKALGAANDAAAAIKDKPEIIDALGRTQQMAGDLNQALASY 630

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             L  +   +P P +     HL ++N     K   +  EI  + VE+   +  +AL+   
Sbjct: 631 TKLAALQPASPLPLVRTADVHLANKNKDEAAKSLKKALEIKSDLVEAQRGLILLALDAKK 690

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            ++A   A    K  P++ +   L                WT++A
Sbjct: 691 PNEALQIAQQIEKQRPKEAVGFAL------EGDIHATSKNWTEAA 729


>gi|260771620|ref|ZP_05880540.1| HemY-like protein [Vibrio metschnikovii CIP 69.14]
 gi|260613397|gb|EEX38596.1| HemY-like protein [Vibrio metschnikovii CIP 69.14]
          Length = 393

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 57/386 (14%), Positives = 123/386 (31%), Gaps = 16/386 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RL+    V+ L +      +     V I+  N     S   ++ ++   L     L  
Sbjct: 1   MIRLLFLLVVLGLGLFVGTQYAGQQGYVLISIANTSIEMSVTTLIIMMVALLAGLFFLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  L   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LIKKILRASSSTWNWFTIRKQRRSRRYTDEGMIKLLEGDWKQAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L YL   + A  +       + L +  + P        +   +        +A    T  
Sbjct: 119 LCYLAAAEAAHEQGDQRKRDDYLTLAAKQPNATLAVELTRAKQLLSDQAWQAAVDILTPL 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               PD   V + + Q Y+  ++W   +  L  K   A+    ++A  L  ++ +     
Sbjct: 179 AQAYPDNILVLKRLKQAYLALEQWQP-LLALIPKLTKAQLLTPSQADALTLQAQQAML-- 235

Query: 241 DMIASYHDAIESLKLCDNSIMASI---------CAAKSLISQNKKRKAEVILEKIWKVNP 291
             I +     E L     S+  ++            + L  Q     A  +L++     P
Sbjct: 236 -SIVATQGGSEGLLTYWQSLPKTLKNETRLMVEVIEQLLQRQADL-AAFKLLKEWLNKQP 293

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+      L  ++    +         +K + E+   + +I L+     Q+      A
Sbjct: 294 TTELYRFLPKLTLKDKQPLIALLQDKLRRDKNNAEAHSALGQILLDEKQWAQSQQHLEQA 353

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK 377
           + +    E +  LAQ  +        
Sbjct: 354 LSLRVNIEDYACLAQALEQQDRPQAA 379


>gi|92115221|ref|YP_575149.1| HemY-like protein [Chromohalobacter salexigens DSM 3043]
 gi|91798311|gb|ABE60450.1| HemY-like protein [Chromohalobacter salexigens DSM 3043]
          Length = 409

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 133/412 (32%), Gaps = 28/412 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M +LI    V   V   F  +    P    +  G+   +TS ++ L IL           
Sbjct: 1   MRKLILLIVVGLAVGALFGQLMQSMPGYWLVRVGDTSIQTSFWLGLVILLAVFLVLHFAL 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            + R      + L     +       K    GL+++A      A K     +   +    
Sbjct: 61  RLLRRLRRPVSRLKVWNSRTRNRNAMKRTVRGLVALAEGRWKRAEKDLVKAADDSS---T 117

Query: 120 YLVYLLEVQ-IALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDL---NSA 173
            LV  L     A  + +++ A   L+                    ++  + D      A
Sbjct: 118 PLVNYLSAALAAHYQGRFDHADTLLKRAHHSTEGADSAVG----MVQAQLMLDRQQFEEA 173

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAIL- 228
               T+     P+ P V + + Q Y+   +W      L     Q+    +E         
Sbjct: 174 LATLTRLEKQLPNHPQVLKLLRQAYLSVNDWEGLRHLLPKLDKQQLITEEERQELEQRAY 233

Query: 229 --LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             LI ++++     D+    +   +      + +   +   ++L+   ++  AE +L   
Sbjct: 234 RELILQAVQRQPNADVNRVRNLWADMPDYLRSDVELVVLYTEALVKGGEEAIAERLLRHS 293

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            K +    +   Y  LL+ +   +L  A +  +      + L+ + +++L      +A  
Sbjct: 294 LKEHWDTRLVLRY-GLLNVDAGRQLAYAEKWLQERPNDPDLLLTLGRLSLRNAYWGKAQE 352

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQ--ANSHNTD----KILYWTQSALHAMPDP 392
               + +  P   +   LA++         +     + +     +L A+P P
Sbjct: 353 YFEASQRQRPSGVVCAELARLYANLGEHQKSQLFYRQSVELLDRSLPALPQP 404


>gi|156975130|ref|YP_001446037.1| hypothetical protein VIBHAR_02857 [Vibrio harveyi ATCC BAA-1116]
 gi|156526724|gb|ABU71810.1| hypothetical protein VIBHAR_02857 [Vibrio harveyi ATCC BAA-1116]
          Length = 391

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 112/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +A    + A +  E +++ P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +V  Y   +EW +AI + NQ  
Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168

Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K  K+  R RA +       ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGKKRTRIRANIAHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRVYLE 228

Query: 273 ----QNKKRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
               ++  +    +LE  K +  +  P IA  Y HL  E+ + +  RA   ++       
Sbjct: 229 SEYYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
           S ++++++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|115372068|ref|ZP_01459380.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310824743|ref|YP_003957101.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115371033|gb|EAU69956.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309397815|gb|ADO75274.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 395

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 94/255 (36%), Gaps = 12/255 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           + + ++  AR+      +++      L+ L   ++A+ + +   A   L+      A  E
Sbjct: 10  LKSGDVQQAREEAEGAFRRNPADRRALIAL--AKLAVLDGEAAKAESYLQKAAGGSAEDE 67

Query: 155 FAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             V  L   S   + G+   AQ   +K     P        +      A + + A   L 
Sbjct: 68  VDV-GLVRASLLMQRGEAGPAQALYSKLTQSQPPRAEAFYGLGFLLAEAGDNTAACAALE 126

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  +         A+     +        +  ++    +SL+L    + + +  A +L +
Sbjct: 127 RAVQLEPGG----AVYHFQLARVLFALARLKEAFQHLEQSLRLNPGHVPSYLVFAIALQA 182

Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLV 329
             +   AE IL +  KV P  P +    +++L+   +  G ++ A  L  +  +   +L 
Sbjct: 183 GGELEAAEDILRQGLKVAPDEPHLLKALSNVLAGKGDFPGAVEAAETLARVQPDHPSALS 242

Query: 330 IVSKIALEMGSIDQA 344
            +++  +   +  +A
Sbjct: 243 NLARFRMAQRNFPEA 257



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 10/199 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GD+  A+  A  A   +P       A+ +  VL  E ++A ++L +    + E   +
Sbjct: 10  LKSGDVQQAREEAEGAFRRNPADRRALIALAKLAVLDGEAAKAESYLQKAAGGSAEDEVD 69

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             ++  +  ++  + G   A Y    +S         A       L        A   LE
Sbjct: 70  VGLVRASLLMQRGEAGPAQALYSKLTQSQ---PPRAEAFYGLGFLLAEAGDNTAACAALE 126

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +  ++ P     H ++A +   L         +   +   +N   V S ++ +      G
Sbjct: 127 RAVQLEPGGAVYHFQLARVLFALAR--LKEAFQHLEQSLRLNPGHVPSYLVFAIALQAGG 184

Query: 340 SIDQAHAKAMLAMKIAPRK 358
            ++ A       +K+AP +
Sbjct: 185 ELEAAEDILRQGLKVAPDE 203



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 6/174 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL+      A  +   A + L   L++       + +L       GD   A   A    
Sbjct: 172 SYLVFAIALQAGGELEAAEDILRQGLKVAPDEPHLLKALSNVLAGKGDFPGAVEAAETLA 231

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + PD P     + +  +  + +  A+    +  +  +  + +R++   A   E  +  D
Sbjct: 232 RVQPDHPSALSNLARFRMAQRNFPEALALCRKLSERGQATSLSRSV--EAMIYETQEPPD 289

Query: 242 MIASYHDAIESLKLCD-NSIMASICAAKSLISQNKK---RKAEVILEKIWKVNP 291
           + A+      ++KL   +   A+      L         ++A+  LE+  +  P
Sbjct: 290 LKAAVAAWRSAMKLDPQDWGPANNLGLLLLTRMEGPEVQKQAQEALEEALRRAP 343



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/200 (9%), Positives = 62/200 (31%), Gaps = 6/200 (3%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            +  + + +  +A        +     +R   I L   ++ + +     +    A  +  
Sbjct: 6   FEALLKSGDVQQAREEAEGAFRRNP-ADRRALIALAKLAVLDGEAAKAESYLQKA--AGG 62

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKL 311
             ++ +   +  A  L+ + +   A+ +  K+ +  P    A     +    + +     
Sbjct: 63  SAEDEVDVGLVRASLLMQRGEAGPAQALYSKLTQSQPPRAEAFYGLGFLLAEAGDNTAAC 122

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
               R  ++          ++++   +  + +A      ++++ P      L+  I    
Sbjct: 123 AALERAVQLEPGGAVYHFQLARVLFALARLKEAFQHLEQSLRLNPGHVPSYLVFAIALQA 182

Query: 372 SHNTDKILYWTQSALHAMPD 391
               +      +  L   PD
Sbjct: 183 GGELEAAEDILRQGLKVAPD 202


>gi|157825836|ref|YP_001493556.1| hypothetical protein A1C_03875 [Rickettsia akari str. Hartford]
 gi|157799794|gb|ABV75048.1| hypothetical protein A1C_03875 [Rickettsia akari str. Hartford]
          Length = 334

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 105/304 (34%), Gaps = 28/304 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+     ++  +   V I+  +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGCTLIESFDSKVFISLYDYNIETTLFFSLILWLLLLISCFIVIK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                +  P+ + ++ +KR  +    AL   +++ A     +  K  S    +++   E 
Sbjct: 61  FLILIIDLPSTIHNIFNKRKINHERYAL---ILAFA--EYIMNNKAKSASIARNSLAYEA 115

Query: 121 LVYLLEVQI------ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           L    + Q       A+ E   +      + ++       +   +L            A+
Sbjct: 116 LK---DSQASHNLILAVTEEDIDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSLYEKAE 172

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARS 233
            YATKA +++         +++ Y     W++ I   N+  K +  +     A   +  +
Sbjct: 173 NYATKAYNLNELDSDNLITLMRCYARFSLWTKFIFITNKLAKFHKHDSMPEIAEYYLLAA 232

Query: 234 LENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIW 287
            +  +  +   +      AI+     D  +       +   + N K    K   IL+  +
Sbjct: 233 KQEIESNNTANAIDYLDTAIDLNFYNDELL-------EFYFNLNDKLNVNKKTKILKDAF 285

Query: 288 KVNP 291
           ++ P
Sbjct: 286 RIIP 289


>gi|145633833|ref|ZP_01789556.1| adenylate cyclase [Haemophilus influenzae 3655]
 gi|148827894|ref|YP_001292647.1| heme-biosynthesis protein HemY [Haemophilus influenzae PittGG]
 gi|229847502|ref|ZP_04467597.1| HemY [Haemophilus influenzae 7P49H1]
 gi|144985336|gb|EDJ92171.1| adenylate cyclase [Haemophilus influenzae 3655]
 gi|148719136|gb|ABR00264.1| HemY [Haemophilus influenzae PittGG]
 gi|229809565|gb|EEP45293.1| HemY [Haemophilus influenzae 7P49H1]
          Length = 428

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 9/168 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++     + + + +   +S     V I   NR+   S   ++      L        
Sbjct: 1   MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   K  K    GL+ +   +   A K+    ++      E 
Sbjct: 61  GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
           ++ L++  + A        A+  L     I AT      +L  E  R 
Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIART 160


>gi|153833361|ref|ZP_01986028.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01]
 gi|148870370|gb|EDL69296.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01]
          Length = 391

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +A    + A +  E +++ P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +V  Y   +EW +AI + NQ  
Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168

Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K  K+  R RA +       ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGKKRTRIRANIAHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRVYLE 228

Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
                   +    +LE  K +  +  P IA  Y HL  E+ + +  RA   ++       
Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
           S ++++++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|147919209|ref|YP_687056.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon
           RC-I]
 gi|110622452|emb|CAJ37730.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon
           RC-I]
          Length = 365

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 17/275 (6%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           A  N+  A K                 +     +     + + A  +L+  L+I   +  
Sbjct: 62  ATGNLEEAEKSFK--DALRIDDKHPGAHSDLGNLYYCLGRLDEALAELQRSLEIDPQQHL 119

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A Y L     R+   + A     K + + P       A+ + Y L      AI       
Sbjct: 120 AHYRLGLVYLRMDRDDEAIEELKKTISLKPSYADAYTALGRTYGLQGRLDEAIAAFRHAI 179

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                     A+      L  + KGD+  +  +  E+++L        +    +L +  K
Sbjct: 180 AEKP----QDAVCHFDLGLALSMKGDLDPANTEFAEAIRLDPEFPDPHMAMGSNLFTDGK 235

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIY--THLLSENTVGKLKRALRLEEINKESVESL 328
             +A     +  ++NP     H ++A +Y    L+ E     +K       +     E+ 
Sbjct: 236 LNEAAFEFREAIRLNPYLEEAHLKLAQVYEQKGLMGEA----VKEYREALAVQPGMYEAN 291

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           + + ++ + +G  ++A  +   A +  P   I  L
Sbjct: 292 LSLGRVHMTLGRYEEAIRELASAAEARPESAIAYL 326



 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 12/257 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                QY+ A       L++      A Y L    C  G+L  A++    AL I    P 
Sbjct: 26  YAMSGQYDNALAHFHKALKLKPDCTDAYYGLACVQCATGNLEEAEKSFKDALRIDDKHPG 85

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y        A+  L +      E +  + +      L          +  + 
Sbjct: 86  AHSDLGNLYYCLGRLDEALAELQRSL----EIDPQQHLAHYRLGLVYLRMDRDDEAIEEL 141

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304
            +++ L  +   A     ++   Q +  +A           P     H ++      +  
Sbjct: 142 KKTISLKPSYADAYTALGRTYGLQGRLDEAIAAFRHAIAEKPQDAVCHFDLGLA-LSMKG 200

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
           +      + A  +  ++ E  +  + +       G +++A  +   A+++ P  +E  L 
Sbjct: 201 DLDPANTEFAEAI-RLDPEFPDPHMAMGSNLFTDGKLNEAAFEFREAIRLNPYLEEAHLK 259

Query: 364 LAQIEQANSHNTDKILY 380
           LAQ+ +      + +  
Sbjct: 260 LAQVYEQKGLMGEAVKE 276



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 13/104 (12%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  E+ +            +AL + P       ++ + ++    +  AI    ++  +A
Sbjct: 268 GLMGEAVKE---------YREALAVQPGMYEANLSLGRVHMTLGRYEEAI----RELASA 314

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            E     AI  +      +  G    +  +  ++LKL  +   A
Sbjct: 315 AEARPESAIAYLELGNAFSKLGFEKEAKQNYEKALKLDPSLESA 358


>gi|149908494|ref|ZP_01897156.1| Uncharacterized enzyme of heme biosynthesis [Moritella sp. PE36]
 gi|149808328|gb|EDM68265.1| Uncharacterized enzyme of heme biosynthesis [Moritella sp. PE36]
          Length = 390

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 117/371 (31%), Gaps = 13/371 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R I    ++         +      V I  G+ +   +    + ++  F FA + + A
Sbjct: 1   MVRFIVLIALLLAGAIVAPYLIGNKGYVMIAAGDYIIDATVSSAVIMVVGFYFALLAIEA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +                 R   +       G++++ + +   A  +    +++       
Sbjct: 61  LINKLTHSLGWFNRYHQARAKIQ----TEKGILALVSGDFKKAETLTLKAAKKARV--PV 114

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA--T 178
           L YL   Q A          E L + L+       AV  L     +I      Q +   +
Sbjct: 115 LNYLTAAQSAQELGNERKRDEYLLLALENADKNTLAVE-LTQAKLQIQQQQFEQAFVSLS 173

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234
                 P    V        +  KEW + +  +     QK   + E +            
Sbjct: 174 TLHGKYPKHKVVLALFKDVCIERKEWGQLLALIPPLQKQKLLTSNEADELSKHSHFQHLG 233

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           E A +              K   +        A  L+ +N  + A +++        +PE
Sbjct: 234 EVAKQQGSTGLLDTWSALPKTLKHDGRYLAETASLLMGRNDHQSAYLLMMDALSNELYPE 293

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +   L   +    ++R  RL++  + S    V + ++ ++ G  ++A  +    +  
Sbjct: 294 LIRLTPKLNLTDYHALIERLKRLQKTREGSGLLAVCIGQLMVKEGRWNEAVDELSQGISQ 353

Query: 355 APRKEIFLLLA 365
           +P    +  LA
Sbjct: 354 SPSTSAYCALA 364


>gi|254483252|ref|ZP_05096484.1| HemY N-terminal domain protein [marine gamma proteobacterium
           HTCC2148]
 gi|214036475|gb|EEB77150.1| HemY N-terminal domain protein [marine gamma proteobacterium
           HTCC2148]
          Length = 416

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 131/390 (33%), Gaps = 27/390 (6%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M +L     +  LV    + V    P  + + +GN    TS +V + +L  F     L  
Sbjct: 1   MRKLFALLLIALLVGVGIVAVIETDPGYILVAYGNYTAETSLWVGIVLLAVFTLLIYLTL 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            + R  L     L   +  R      +    GL+S    N   AR+    +         
Sbjct: 61  RLVRRLLGGQQSLASWIGGRRVRASSRLTTRGLISFIEGNWTRARR--QLLRGAKNSEAP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRY 176
            + YL+  + +    + +   E L       A  E  +     ++      G    A   
Sbjct: 119 LVNYLMAARSSYRLNEPDKMREYLGA--AEDAESEAGIAVELTQAELRLHSGQFEQALAT 176

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIAR 232
             +A   +   P+V + + + Y   K+W   ++ L      K  +A+   +    +    
Sbjct: 177 LVRARRNAGRHPYVLDLLHRAYYGLKDWQELVSLLPELKKYKVLSAEALEKLEREIYTEM 236

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAK----SLISQNKKRKAEVI----LE 284
            + +A   D   +   A +++      +  +  A       L+       AE +    L+
Sbjct: 237 LISSAQGDDSGDALQQAWQAM---PAHLKQNASALDKYVALLVKGGHHATAEKVIPRALK 293

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           + W       +   Y ++L +++  +L +A      + E  + L+ + +++       +A
Sbjct: 294 QTWDSK----LVREYGYVLGQDSAKQLAQAENWLPAHTEDAQLLLCLGRLSAREKLWGKA 349

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
                 + ++    EI   L ++  A    
Sbjct: 350 RDYFESSYRLERSAEICAELGRLLVALGEP 379


>gi|218710952|ref|YP_002418573.1| HemY protein [Vibrio splendidus LGP32]
 gi|218323971|emb|CAV20333.1| HemY protein [Vibrio splendidus LGP32]
          Length = 393

 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 115/363 (31%), Gaps = 20/363 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R I  F V+   +      S     V I+  N+    S   ++  +   L A   L  
Sbjct: 1   MIRWIFLFLVLGAGLIVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIALLAALFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LFKKLMYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178
           L YL+  Q A  +   +   +K   +         AV  L     +I +    +A     
Sbjct: 119 LCYLVASQAAHEQGNTSE-RDKYIELASQQEDSLLAVE-LTKAKQQISESNYEAA---FD 173

Query: 179 KALDISPDAPWVTEAVVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
              ++    P    AV+      Y+  K W   +  L  K    K       I L  ++ 
Sbjct: 174 TLSNLKGSHP-NNTAVLGLLKATYMQLKLWQPLLE-LTPKLAKNKLLTAEEQIELEQKAQ 231

Query: 235 -----ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
                + A +           +  +    S     C  K LI++    +A  ++++    
Sbjct: 232 CGLLHDVAQQQGSEGLISHWNKLSRKQKQSSHLVSCFVKQLIARKADSEAFTVIKENIAK 291

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +   E+  +   L   +    +    R    +  + E+   +++  L      +A     
Sbjct: 292 SGSNELYMLLPELNLPDHHPVVVMLERAISKDNGNAEAHSALAQFYLREQKWSEAQTHFE 351

Query: 350 LAM 352
            A+
Sbjct: 352 KAL 354


>gi|254360507|ref|ZP_04976656.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica
           PHL213]
 gi|153091047|gb|EDN73052.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica
           PHL213]
          Length = 421

 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 15/190 (7%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
            ++     V I     +   S  +++      +    LL  +           ++    R
Sbjct: 20  YLAGNQGYVRIETATTVIEMSIVMLVVFFVLAMAVVYLLEWIVTKICRMSNGAYNWFSTR 79

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNI 138
            + K  +    GLM ++  N   A K+ S  ++     +E ++ L++  + A        
Sbjct: 80  KHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHA---DEPVLNLIKAAEAAQQNGDDLA 136

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSAQRYATKALDISPDAPWVTE 192
           A++ L     I AT      ++  E  R       G L +A+      L+++P +  V  
Sbjct: 137 ANKYL-----IKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSLLELAPHSDEVLR 191

Query: 193 AVVQQYVLAK 202
             +Q Y  ++
Sbjct: 192 LAIQIYKESR 201



 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 12/134 (8%)

Query: 186 DAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                 +  ++    +    +S+A    ++  K+A E      + LI  +      GD +
Sbjct: 80  KHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHADEP----VLNLIKAAEAAQQNGDDL 135

Query: 244 ASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA-N 297
           A+    I++ ++   N++   +   + L+ Q K   A   ++ + ++ PH +    +A  
Sbjct: 136 AANKYLIKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQ 195

Query: 298 IYTHLLSENTVGKL 311
           IY    +   + +L
Sbjct: 196 IYKESRAYVALDRL 209


>gi|152997596|ref|YP_001342431.1| HemY domain-containing protein [Marinomonas sp. MWYL1]
 gi|150838520|gb|ABR72496.1| HemY domain protein [Marinomonas sp. MWYL1]
          Length = 409

 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 128/393 (32%), Gaps = 31/393 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M +L+    ++  V     ++       V + +      TS +V++  +   LF    + 
Sbjct: 1   MRKLLFLLVIMMAVGGVLGLLMRQDSGYVLVAYNGVTIETSLWVLVVAMVIALFVLSWVK 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +    L     L  +       +  +    G++ +   N   A K+ +  +++ ++   
Sbjct: 61  RILFIALRPSNSLAKVTGNLAQKRASRNTIRGMLELVGGNWNKAEKLLTNSAEKVSY--- 117

Query: 120 YLVYLL-EVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+  +     A  + ++  +   L       P       ++      +      A    
Sbjct: 118 PLINYIGAAYAASEQDEHERSKALLRSAHKSTPEAEFAIGFAQSQIQIKQEHYEGALASL 177

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS-LEN 236
            +   + P    V + +V  Y   K+W  A+  L    K    ++ +  + L   + L  
Sbjct: 178 LRLQKLKPKHKQVLKMLVTVYKQLKDWD-ALLTLTPILKKDGIFDDDNMLELERNAFLAL 236

Query: 237 ADK-------GDMIASYHDAIES--LKLC----DNSIMASICAAKSLISQNKKRKAEVIL 283
            DK       G         +E+   KL     D+ +      A +LI      KAE  +
Sbjct: 237 LDKIKFRNKLGQNKKELVAEVENLWNKLDTLSQDDRM--RQLYAHTLIHFGDDAKAESFI 294

Query: 284 EKI----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                  W      E+   Y ++  +NT   L       +    S    ++  +++  M 
Sbjct: 295 RNSLNNRWSD----ELVYEYGNIKQDNTKKLLTHCENWLKKEPASANLYLVCGRLSQSMM 350

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              +A      A+ +  + E    L+++ +A  
Sbjct: 351 LWGKARDYYEQALSLDTQNEALAELSRLLKAMG 383


>gi|307718362|ref|YP_003873894.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306532087|gb|ADN01621.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 653

 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   A +  +  L          + Y+L            A  YA KA+D++P 
Sbjct: 410 TYYLAGRLQDAEKAFKEALSTEEGSNDPISAYNLALVLIEEDKAQEALSYAQKAVDLAPR 469

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P     +         ++ A     +  +   ++ + R  L     L + DKG+   + 
Sbjct: 470 VPEYQYTLGLAAYKLGAYTVAEAAFGKAIELKPDYVKPRVQL----GLLHQDKGEDDKAL 525

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTH 301
              +E+ KL   S   +         +    ++        + +P        +A  Y  
Sbjct: 526 SLLLEAYKLDPTSFEVNNNLGNLYARKKLYSESIKHYRAAIEADPKDTLVRYNLALSYLD 585

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               +   ++     L +I+    ++   + K+ + +   + A       ++  P    +
Sbjct: 586 AKEYDEAVRV--FQELLKIDPSYWDAYYQLGKLLITLEDAEGAKKVLSTLLEKKPD---Y 640

Query: 362 LLLAQIEQANSH 373
              A++E+  S 
Sbjct: 641 SRRAEVEKLLSG 652


>gi|46562211|ref|YP_009076.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46447748|gb|AAS94414.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
          Length = 915

 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 14/262 (5%)

Query: 102 LARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           LA++  +   Q+         ++   + +     +A      A    E  L +      A
Sbjct: 371 LAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPA 430

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L       G  + A      A+  +PD   V  A+   ++   +  + +  + +  +
Sbjct: 431 LLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNALFAYHLGRGDTGKGVQVVLEGLR 490

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                    AIL         + GD         ++ +   +   A +   +      + 
Sbjct: 491 GTP----QDAILYTMLVPVYVNMGDEAKGLDAVAQAHRADPDFPDAYLAGLRLHAGAGRA 546

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333
            +A    E      P  P        LL     T     R  +   +          V++
Sbjct: 547 EQALAESEAYLARKPDAPGFLLASGALLDLLGRTAEADARFDK--ALAANDPRVSFAVAE 604

Query: 334 IALEMGSIDQAHAKAMLAMKIA 355
            A+  G  ++A      A++  
Sbjct: 605 RAVASGQDEKARRVLEEALRQH 626



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 83/273 (30%), Gaps = 23/273 (8%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPAT 152
           ++A+     AR++     +QH      L   L +Q+A    + + A      +  Q P  
Sbjct: 606 AVASGQDEKARRVLEEALRQH--DQTTLRDALAIQLARM-GKPDDALALYTAIETQRPRE 662

Query: 153 REFAVYSLYFESCR-IGDLNSAQRYAT-KALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                Y L     R     ++A+     ++    P                      +  
Sbjct: 663 ALLGRYRLLTHLDRHQEAADTARELGRRESASPLPVLLEAAAFERMGQRPQG-----VAL 717

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L    + + +       LL+A        GD   +     ++LK   + +   +  A   
Sbjct: 718 LEAAHRKSGDPE-----LLLAMGGMLERNGDEARAETCYRDALKARPDHVPTLLAYAGLD 772

Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI--NKE 323
           + + +  KA  + EK   + P        +A  Y    S +   +    L L+      +
Sbjct: 773 MRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQAYTRAPD 832

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +   L  +    +  G  D A      A+   P
Sbjct: 833 NPAVLDTLGVCMMANGRADDAARAFGRAVVAVP 865



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 95/310 (30%), Gaps = 22/310 (7%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIP 150
           +   A     A         +    +     L    +     +   A  + +  L    P
Sbjct: 539 LHAGAGRAEQALAESEAYLARK--PDAPGFLLASGALLDLLGRTAEADARFDKALAANDP 596

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                    +   +   G    A+R   +AL    D   + +A+  Q     +   A+  
Sbjct: 597 RVSFA----VAERAVASGQDEKARRVLEEALRQH-DQTTLRDALAIQLARMGKPDDALAL 651

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                   +      A+L   R L + D+     +   A E  +    S +  +  A + 
Sbjct: 652 YTA----IETQRPREALLGRYRLLTHLDRHQ--EAADTARELGRRESASPLPVLLEAAAF 705

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESL 328
               ++ +   +LE   + +  PE+      +   + +            +   + V +L
Sbjct: 706 ERMGQRPQGVALLEAAHRKSGDPELLLAMGGMLERNGDEARAETCYRDALKARPDHVPTL 765

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH--NTDKILYWTQ 383
           +  + + +      +A A    A+ IAP   +    L +A +E+A+        +    Q
Sbjct: 766 LAYAGLDMRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQ 825

Query: 384 SALHAMPDPL 393
           +   A  +P 
Sbjct: 826 AYTRAPDNPA 835



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 7/201 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+++   +   A  + + +++   F +  L  +L+  +A   + Y +A    +  + + 
Sbjct: 266 GLLALQTGDEAGAAAVAASMNKD--FKDNSLTLMLDGALAAQRKDYTLAASLFQRSVAM- 322

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                  Y L       GDL +A     + L+ +P+        V   +  +  + A   
Sbjct: 323 RPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVAEARQE 382

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +      E N + A      +      GD   +       L L    + A +  ++  
Sbjct: 383 AQK----LVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRLK 438

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
            +  +  +A   L+      P
Sbjct: 439 QADGRPDEALEDLKAAVVAAP 459



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 99/324 (30%), Gaps = 38/324 (11%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A+ +      +       +   L        R    A   LE  + + A R     +L  
Sbjct: 140 AKALPHLARYEQGAGETAVSRELAGLAHAQARSPEEARAALERSIALDAKRVTPRLALAR 199

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKE 220
                GDL  A     +AL ++P+            +   +   A+    +        +
Sbjct: 200 LFLYRGDLKRAVATVDEALAVAPEDRLALTLRGDLLLRQGDAPGALVVFRKVASLAPGDD 259

Query: 221 WNRNRAILLIARSLENADKGDMIAS-------------YHDAIESLKLCDNSIMASICAA 267
           + R  + LL  ++ + A    + AS                A+ + +       A+    
Sbjct: 260 YARYMSGLLALQTGDEAGAAAVAASMNKDFKDNSLTLMLDGALAAQRKDYTL--AASLFQ 317

Query: 268 K----------------SLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTV 308
           +                +L  +     A     ++ +  P  + A    +   L      
Sbjct: 318 RSVAMRPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVA 377

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367
              + A +L E N     +  +++   +  G    A       + + P     LL L+++
Sbjct: 378 EARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRL 437

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
           +QA+    + +    ++A+ A PD
Sbjct: 438 KQADGRPDEALED-LKAAVVAAPD 460



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 100/340 (29%), Gaps = 31/340 (9%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD         +A    PD P    A ++ +  A    +A+           +      +
Sbjct: 510 GDEAKGLDAVAQAHRADPDFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGF--L 567

Query: 228 LLIARSLENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           L     L+   +     +    A+ +     +        A+  ++  +  KA  +LE+ 
Sbjct: 568 LASGALLDLLGRTAEADARFDKALAANDPRVSFA-----VAERAVASGQDEKARRVLEEA 622

Query: 287 WKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            + +    +  A              L     +E       E+L+   ++   +    +A
Sbjct: 623 LRQHDQTTLRDALAIQLARMGKPDDALALYTAIETQRP--REALLGRYRLLTHLDRHQEA 680

Query: 345 HAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402
              A    +      + +LL  A  E+         L   ++A     DP  +   G + 
Sbjct: 681 ADTARELGRRESASPLPVLLEAAAFERMGQRPQGVAL--LEAAHRKSGDPELLLAMGGML 738

Query: 403 SVW--LPLSPISKTLCYFEWKIPTKSPEYIS-----------SENINFSLEMAYPADDLQ 449
                   +         +   P   P  ++           ++      +    A D  
Sbjct: 739 ERNGDEARAETCYR-DALK-ARPDHVPTLLAYAGLDMRRKEYAKATALYEKAVSIAPDDV 796

Query: 450 SMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGI 489
             LNN    +L    + ++ + +    L  + R PD+P +
Sbjct: 797 VALNNLAMAYLEKASRDATPQKALRLALQAYTRAPDNPAV 836


>gi|330820193|ref|YP_004349055.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
 gi|327372188|gb|AEA63543.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
          Length = 786

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 100/283 (35%), Gaps = 28/283 (9%)

Query: 94  SIAAHNIPLARKMHSYV----SQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQ 148
            +A  ++  A +  +       Q      + +  +        +  Q   A E    +L+
Sbjct: 74  HLARGHVFAAAQCFAEAIGAYRQALALDADSIDAHFALASALQSAGQAAPAIEAYTALLE 133

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               R  A+ +L     ++G+  +AQ    +AL++ P        +    +   +   ++
Sbjct: 134 RDPARVDALNNLGNCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLALATGQLDESV 193

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L   ++ A +      ++L    +     G+   S      +L L      A+   A 
Sbjct: 194 ALLEMARQVAPDSP----VVLANLGVALHRHGEFARSAALLTRTLALDPVFPEAAYNLAN 249

Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLS-ENTVGKLKRALRLEEINK 322
           +L +  ++R+A    ++  +  P H +    +  +Y    S  +       A+RL     
Sbjct: 250 ALHALGRRREALDHYQRAIEQAPAHADAYNNLGVVYQEAGSLHDAADAFDTAIRLR---- 305

Query: 323 ESVESLVIVSKIALE-----MGSIDQAHAKAMLAMKIAPRKEI 360
               S  + +   L      +G++D+A A+   A+ + PR   
Sbjct: 306 ----SAFLAALNNLAVTMRMLGAMDEAEARLRDALAVDPRHSA 344


>gi|326796194|ref|YP_004314014.1| HemY domain protein [Marinomonas mediterranea MMB-1]
 gi|326546958|gb|ADZ92178.1| HemY domain protein [Marinomonas mediterranea MMB-1]
          Length = 413

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 128/386 (33%), Gaps = 27/386 (6%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             V I +      TS +V+++ +   L     L +V    +   +    +  K    +  
Sbjct: 27  GYVLIAFKGVTIETSLWVMVAAMIVTLIILNSLKSVLFTLIRPSSSFNKVTAKLVQKRAS 86

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE- 144
           K    G++ +   N   A K+ +  +++       + Y+     A  +  +  + E L  
Sbjct: 87  KNTIRGMLELVGGNWKRAEKLLTTSAEK--VPYPLINYIGAAYAASEQDDHTRSKELLRI 144

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
                P       ++      + G   SA     +   + P    + + +V  Y   K+W
Sbjct: 145 AHKSAPEAEFAIGFAQSQIQVKQGHYESALATLLRLNKLKPKHRQILKMLVTVYTQLKDW 204

Query: 205 SRAITFLNQKKKNAK-------EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              +       KN         E  RN  + L+ R       G   AS    +E++    
Sbjct: 205 DALLALKPTLTKNGIFDETNMLELERNAFLALLERITFQTKIGKDKASLVKELEAVWQKL 264

Query: 258 NSI----MASICAAKSLISQNKKRKAEVILE----KIWKVNPHPEIANIYTHLLSE---- 305
           +S+       +  A SLI     ++AE  +     K W      ++A +Y  L S     
Sbjct: 265 DSLEKDNEIRLLYASSLIQFGDDKRAESYIRQSLNKEWSD----DLAKLYGTLGSGVEVK 320

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           N    L +A    +    S    +   +++ ++    +A      A+ +    E    LA
Sbjct: 321 NAKKALSQAESWLKKEIGSANLYLTCGRLSQQLKLWGKAKDYYQSALALDSDSEALPELA 380

Query: 366 QIEQANSHNTDKILYWTQSALHAMPD 391
           ++ +A   +         S + A  D
Sbjct: 381 RLLKAM-GDEPASQSLLLSQIKAPDD 405


>gi|257465327|ref|ZP_05629698.1| HemY-like protein [Actinobacillus minor 202]
 gi|257450987|gb|EEV25030.1| HemY-like protein [Actinobacillus minor 202]
          Length = 416

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 74/205 (36%), Gaps = 15/205 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   + +   ++ +   V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLVLAALIAGPYLAGHQGYVRIETDTKVIEMSLVMLVVFFVSAMAVLYAVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R +    +    GLM ++  +   A K+ S  ++     +E 
Sbjct: 61  AITRFCRLSKGSYDWFFNRKHKNAQQETLEGLMRMSEGDYSKAEKLFSKNAKYA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSA 173
           ++ L++  + A        A+  L     I A++   + ++  E  R       G L +A
Sbjct: 118 VLNLIKAAEAAQQRGDDFEANRYL-----IEASKLGGMNNVAVELARAKILVQQGKLPAA 172

Query: 174 QRYATKALDISPDAPWVTEAVVQQY 198
           +      L+++P+   V    ++ Y
Sbjct: 173 RSAIDSLLELAPNNTEVLRLAIRIY 197


>gi|28898801|ref|NP_798406.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365325|ref|ZP_05777876.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
 gi|260880825|ref|ZP_05893180.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
 gi|260897845|ref|ZP_05906341.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
 gi|28807020|dbj|BAC60290.1| putative heat shock protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087595|gb|EFO37290.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
 gi|308093631|gb|EFO43326.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
 gi|308111243|gb|EFO48783.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
          Length = 391

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E +++ P     
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                Y E+                           + +V  Y   +EW +AI + NQ  
Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIHYANQLA 168

Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K   + +R R   A      ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRASISLGRIYLE 228

Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
               ++       +LE  K +  +  P IA  Y HL  E+ + +  RA  +++    S E
Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
             ++++++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 288 --LMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|311235415|gb|ADP88268.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris
           RCH1]
          Length = 886

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 14/262 (5%)

Query: 102 LARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           LA++  +   Q+         ++   + +     +A      A    E  L +      A
Sbjct: 342 LAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPA 401

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L       G  + A      A+  +PD   V  A+   ++   +  + +  + +  +
Sbjct: 402 LLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNALFAYHLGRGDTGKGVQVVLEGLR 461

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                    AIL         + GD         ++ +   +   A +   +      + 
Sbjct: 462 GTP----QDAILYTMLVPVYVNMGDEAKGLDAVAQAHRADPDFPDAYLAGLRLHAGAGRA 517

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333
            +A    E      P  P        LL     T     R  +   +          V++
Sbjct: 518 EQALAESEAYLARKPDAPGFLLASGALLDLLGRTAEADARFDK--ALAANDPRVSFAVAE 575

Query: 334 IALEMGSIDQAHAKAMLAMKIA 355
            A+  G  ++A      A++  
Sbjct: 576 RAVASGQDEKARRVLEEALRQH 597



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 83/273 (30%), Gaps = 23/273 (8%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPAT 152
           ++A+     AR++     +QH      L   L +Q+A    + + A      +  Q P  
Sbjct: 577 AVASGQDEKARRVLEEALRQH--DQTTLRDALAIQLARM-GKPDDALALYTAIETQRPRE 633

Query: 153 REFAVYSLYFESCR-IGDLNSAQRYAT-KALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                Y L     R     ++A+     ++    P                      +  
Sbjct: 634 ALLGRYRLLTHLDRHQEAADTARELGRRESASPLPVLLEAAAFERMGQRPQG-----VAL 688

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L    + + +       LL+A        GD   +     ++LK   + +   +  A   
Sbjct: 689 LEAAHRKSGDPE-----LLLAMGGMLERNGDEARAETCYRDALKARPDHVPTLLAYAGLD 743

Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI--NKE 323
           + + +  KA  + EK   + P        +A  Y    S +   +    L L+      +
Sbjct: 744 MRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQAYTRAPD 803

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +   L  +    +  G  D A      A+   P
Sbjct: 804 NPAVLDTLGVCMMANGRADDAARAFGRAVVAVP 836



 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 95/310 (30%), Gaps = 22/310 (7%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIP 150
           +   A     A         +    +     L    +     +   A  + +  L    P
Sbjct: 510 LHAGAGRAEQALAESEAYLARK--PDAPGFLLASGALLDLLGRTAEADARFDKALAANDP 567

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                    +   +   G    A+R   +AL    D   + +A+  Q     +   A+  
Sbjct: 568 RVSFA----VAERAVASGQDEKARRVLEEALRQH-DQTTLRDALAIQLARMGKPDDALAL 622

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                   +      A+L   R L + D+     +   A E  +    S +  +  A + 
Sbjct: 623 YTA----IETQRPREALLGRYRLLTHLDRHQ--EAADTARELGRRESASPLPVLLEAAAF 676

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESL 328
               ++ +   +LE   + +  PE+      +   + +            +   + V +L
Sbjct: 677 ERMGQRPQGVALLEAAHRKSGDPELLLAMGGMLERNGDEARAETCYRDALKARPDHVPTL 736

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH--NTDKILYWTQ 383
           +  + + +      +A A    A+ IAP   +    L +A +E+A+        +    Q
Sbjct: 737 LAYAGLDMRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQ 796

Query: 384 SALHAMPDPL 393
           +   A  +P 
Sbjct: 797 AYTRAPDNPA 806



 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 7/201 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+++   +   A       S    F +  L  +L+  +A   + Y +A    +  + + 
Sbjct: 237 GLLALQTGD--EAGAAAVAASMNKDFKDNSLTLMLDGALAAQRKDYTLAASLFQRSVAM- 293

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                  Y L       GDL +A     + L+ +P+        V   +  +  + A   
Sbjct: 294 RPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVAEARQE 353

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +      E N + A      +      GD   +       L L    + A +  ++  
Sbjct: 354 AQK----LVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRLK 409

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
            +  +  +A   L+      P
Sbjct: 410 QADGRPDEALEDLKAAVVAAP 430



 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 99/324 (30%), Gaps = 38/324 (11%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A+ +      +       +   L        R    A   LE  + + A R     +L  
Sbjct: 111 AKALPHLARYEQGAGETAVSRELAGLAHAQARSPEEARAALERSIALDAKRVTPRLALAR 170

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKE 220
                GDL  A     +AL ++P+            +   +   A+    +        +
Sbjct: 171 LFLYRGDLKRAVATVDEALAVAPEDRLALTLRGDLLLRQGDAPGALVVFRKVASLAPGDD 230

Query: 221 WNRNRAILLIARSLENADKGDMIAS-------------YHDAIESLKLCDNSIMASICAA 267
           + R  + LL  ++ + A    + AS                A+ + +       A+    
Sbjct: 231 YARYMSGLLALQTGDEAGAAAVAASMNKDFKDNSLTLMLDGALAAQRKDYTL--AASLFQ 288

Query: 268 K----------------SLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTV 308
           +                +L  +     A     ++ +  P  + A    +   L      
Sbjct: 289 RSVAMRPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVA 348

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367
              + A +L E N     +  +++   +  G    A       + + P     LL L+++
Sbjct: 349 EARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRL 408

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
           +QA+    + +    ++A+ A PD
Sbjct: 409 KQADGRPDEALED-LKAAVVAAPD 431


>gi|302036000|ref|YP_003796322.1| hypothetical protein NIDE0624 [Candidatus Nitrospira defluvii]
 gi|300604064|emb|CBK40396.1| protein of unknown function, containing TPR repeats [Candidatus
           Nitrospira defluvii]
          Length = 399

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 13/182 (7%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                  AI  L +      +      +L +        K +   +     +SLKL   S
Sbjct: 92  REGNADGAIEALKKALVQNPKLAEAYHVLGLVY---FQSKRNPDEAIQAYKQSLKLGPAS 148

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314
                  A   ++Q +   AE +L +   + P     H ++A +Y      +    LK  
Sbjct: 149 AEILNDLADVYLAQGRGSDAEGVLRQALDIAPGNEEAHLDLARLYEA--RHDRANALKMY 206

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH 373
             L  +  +  E+L  ++ +    G +  A        +  P   + + LL ++  A   
Sbjct: 207 QSLLRVRPDHAEALYHLASLYDSQGDLKLAREYLSRLTQANPGHADAWYLLGRL--AERG 264

Query: 374 NT 375
           N 
Sbjct: 265 ND 266



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 6/197 (3%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A      A  +          + E   +L   ++  A      A +  + +L++     
Sbjct: 160 LAQGRGSDAEGVLRQALDIAPGNEEA--HLDLARLYEARHDRANALKMYQSLLRVRPDHA 217

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+Y L       GDL  A+ Y ++    +P        ++ +          +      
Sbjct: 218 EALYHLASLYDSQGDLKLAREYLSRLTQANPGHADAW-YLLGRLAERG---NDLNAAAAA 273

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K A     +              +G +  +  + +E ++       A +       S N
Sbjct: 274 FKEAIAVKADLVDAHYNLGFVYRSQGLLAEAEREFLEVIRYRPEYAEAHLNLGMVYTSLN 333

Query: 275 KKRKAEVILEKIWKVNP 291
           +  +AE   E+   + P
Sbjct: 334 RLEEAEKEHERAVALKP 350



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 85/270 (31%), Gaps = 50/270 (18%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDI 183
               E   + A E L+  ++Q P   E      +  +YF+S R    + A +   ++L +
Sbjct: 89  TLFREGNADGAIEALKKALVQNPKLAEAYHVLGL--VYFQSKRN--PDEAIQAYKQSLKL 144

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P +  +   +   Y+     S A   L Q    A           +  +     + D  
Sbjct: 145 GPASAEILNDLADVYLAQGRGSDAEGVLRQALDIAPGNEE----AHLDLARLYEARHDRA 200

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302
            +       L++  +   A    A    SQ   + A   L ++ + NP H +   +   L
Sbjct: 201 NALKMYQSLLRVRPDHAEALYHLASLYDSQGDLKLAREYLSRLTQANPGHADAWYLLGRL 260

Query: 303 -----------------------------------LSENTVGKLKR-ALRLEEINKESVE 326
                                               S+  + + +R  L +     E  E
Sbjct: 261 AERGNDLNAAAAAFKEAIAVKADLVDAHYNLGFVYRSQGLLAEAEREFLEVIRYRPEYAE 320

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + + +  +   +  +++A  +   A+ + P
Sbjct: 321 AHLNLGMVYTSLNRLEEAEKEHERAVALKP 350


>gi|88812565|ref|ZP_01127813.1| TPR repeat protein [Nitrococcus mobilis Nb-231]
 gi|88790159|gb|EAR21278.1| TPR repeat protein [Nitrococcus mobilis Nb-231]
          Length = 918

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 111/318 (34%), Gaps = 13/318 (4%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
            +   +   AL   L++       L + + +    Q       +  +L   + L +++ +
Sbjct: 427 DKKDSRADVALIRTLIA----KRQLDQALPAIDRLQEKLPESAIPEVLRGLVFLLQKKSD 482

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A +     ++         + L   + +  D  +A+++    LD  P       A+   
Sbjct: 483 TALQAFTAAVKKDPDSIGGHHGLAVLAIQKRDFAAAKKHYQAILDAHPGNLRTELALSGL 542

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              + + + A+++L +  ++  E     AI     + E   +G    +     ++L+   
Sbjct: 543 ARRSDDRAGALSWLERAAEDNPES----AIAAGLYARELLAQGKTRKALQAIQKALETNP 598

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI----YTHLLSENTVGKLKR 313
             +        SL+++ + R A    +++   +P   +A +        L++    +   
Sbjct: 599 EHVGLLYMRGASLLAEGEHRAAADTYQELIAAHPKFMLARLQLARARRQLNDIDGAREAL 658

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
              L E++   V + V +  +  +  +  +A        +  P+  +  LL    +    
Sbjct: 659 TEAL-ELSPHHVGAKVTLLLLEAQAKNFSRALKLVHEIEQQHPKSPVGQLLEAQVRVLQD 717

Query: 374 NTDKILYWTQSALHAMPD 391
              + +    SA  A P+
Sbjct: 718 KLPQAIDTLLSAAKAHPE 735



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 104/279 (37%), Gaps = 19/279 (6%)

Query: 87  ALYTGLMS---IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHE 141
           A+  GL +   +A      A +            N   V LL ++ A    E ++  A +
Sbjct: 567 AIAAGLYARELLAQGKTRKALQAIQKA----LETNPEHVGLLYMRGASLLAEGEHRAAAD 622

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             + ++        A   L     ++ D++ A+   T+AL++SP        ++     A
Sbjct: 623 TYQELIAAHPKFMLARLQLARARRQLNDIDGAREALTEALELSPHHVGAKVTLLLLEAQA 682

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           K +SRA+  +++ ++   +    +    +  +     +  +  +    + + K    S  
Sbjct: 683 KNFSRALKLVHEIEQQHPKSPVGQ----LLEAQVRVLQDKLPQAIDTLLSAAKAHPESRA 738

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEI 320
                A    +  K R+A V +   W    HP ++            +G+ K A  + E 
Sbjct: 739 VMRMLASLQWATGK-REASVTILAAWLKT-HPGDLQMARALGDRYLAMGRNKAAGEIYEK 796

Query: 321 N-KESVESLVIVSKIALE--MGSIDQAHAKAMLAMKIAP 356
             ++     ++++ +AL   +   +QA   A  A ++ P
Sbjct: 797 VIQDHPRDALVLNNLALARWLDDPEQAMKLAREANRLQP 835



 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 94/293 (32%), Gaps = 44/293 (15%)

Query: 124 LLEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL +  A A    + A + L  +  + I   +  A       +   GD  + + Y  +A+
Sbjct: 334 LLALSQAQAGGD-DAAVQTLRELQGVDIEDPKVLAAIG--QAALSAGDSATGRHYFEQAV 390

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKG 240
             +PD      A+    + + +  +AI  L+   + + K+   + A++    +    D+ 
Sbjct: 391 ARAPDKAAFRMALASVLLESGDARQAIEELDVASQLDKKDSRADVALIRTLIAKRQLDQA 450

Query: 241 -----------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                                            +      ++K   +SI      A   I
Sbjct: 451 LPAIDRLQEKLPESAIPEVLRGLVFLLQKKSDTALQAFTAAVKKDPDSIGGHHGLAVLAI 510

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +     A+   + I   +P      +    L+  +  +      LE   +++ ES +  
Sbjct: 511 QKRDFAAAKKHYQAILDAHPGNLRTELALSGLARRSDDRAGALSWLERAAEDNPESAIAA 570

Query: 332 ---SKIALEMGSIDQAHAKAMLAMKIAP------RKEIFLLLAQIEQANSHNT 375
              ++  L  G   +A      A++  P            LLA+ E   + +T
Sbjct: 571 GLYARELLAQGKTRKALQAIQKALETNPEHVGLLYMRGASLLAEGEHRAAADT 623



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 95/272 (34%), Gaps = 14/272 (5%)

Query: 98  HNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
             I  A + +               N+    L   QI L E Q + A   +E + ++  T
Sbjct: 200 GRIEAAAQQNKAALDAFDKALELSPNQPGALLGRAQIELIENQLDAAEADIEALRKLAPT 259

Query: 153 REFAVYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
              A + L F   R G   ++A  Y   AL  +PD       +         + +AI   
Sbjct: 260 SVQANHLLGFLRFRQGRFNDAALAY-QDALRANPDFDPAILWLGLTNYAQHNYEQAIQRF 318

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           ++  +   +  R + +L ++++    D   +       ++ + + D  ++A+I   ++ +
Sbjct: 319 SRFLQKYPDSVRVKVLLALSQAQAGGDDAAVQTLRE--LQGVDIEDPKVLAAI--GQAAL 374

Query: 272 SQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           S           E+     P      +A     L S +    ++      +++K+   + 
Sbjct: 375 SAGDSATGRHYFEQAVARAPDKAAFRMALASVLLESGDARQAIEELDVASQLDKKDSRAD 434

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           V + +  +    +DQA        +  P   I
Sbjct: 435 VALIRTLIAKRQLDQALPAIDRLQEKLPESAI 466



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 22/189 (11%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV---------QIAL 131
            DK  +A+ T L +  AH    A        Q  T   E  V +L           Q+A 
Sbjct: 716 QDKLPQAIDTLLSAAKAHPESRAVMRMLASLQWATGKREASVTILAAWLKTHPGDLQMAR 775

Query: 132 AERQY-------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           A             A E  E ++Q        + +L   +  + D   A + A +A  + 
Sbjct: 776 ALGDRYLAMGRNKAAGEIYEKVIQDHPRDALVLNNLAL-ARWLDDPEQAMKLAREANRLQ 834

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIARSLENADK 239
           P  P + + +    V   +  + +  L   K+   +     ++   A+    R     ++
Sbjct: 835 PKNPALQDTLGWMLVEDGQVEQGLPLLESAKERLGDSLTVQYHYAAALARAGRQSAAREE 894

Query: 240 GDMIASYHD 248
              + +   
Sbjct: 895 LKDLLAKDK 903



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 65/196 (33%), Gaps = 9/196 (4%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP 150
           L+   A N   A K+   + QQH      +  LLE Q+ + + +   A + L       P
Sbjct: 677 LLEAQAKNFSRALKLVHEIEQQH--PKSPVGQLLEAQVRVLQDKLPQAIDTLLSAAKAHP 734

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            +R   +  L       G   ++       L   P    +  A+  +Y+       A   
Sbjct: 735 ESRAV-MRMLASLQWATGKREASVTILAAWLKTHPGDLQMARALGDRYLAMGRNKAAGEI 793

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  ++    +   A++L   +L      D   +   A E+ +L   +          L
Sbjct: 794 YEKVIQD----HPRDALVLNNLALARWLD-DPEQAMKLAREANRLQPKNPALQDTLGWML 848

Query: 271 ISQNKKRKAEVILEKI 286
           +   +  +   +LE  
Sbjct: 849 VEDGQVEQGLPLLESA 864



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 21/227 (9%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E      LN+A      AL  SPD       + + YV + +   A   L +      + 
Sbjct: 30  IEYRDQDKLNAAVIELKNALQQSPDNAKARLLLGKVYVESGQGRAAEKELRRAISLGVD- 88

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                      +LE A    +   Y D +++L+    S  A    A++LI +    +A  
Sbjct: 89  -------EGEIALELAKAMLIQGRYQDVLDALQPSRQSDPA--RHAEALIVKGDAGQALG 139

Query: 282 ILEKIWKVNPHP----------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +E                   ++  +   +L +       R  RL + + +  +S +++
Sbjct: 140 KIELACADYQQASKLDADNLSADLGLVRCDVLQDRIDQARARVKRLLQQHPKHAQSWIML 199

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDK 377
            +I         A      A++++P +   LL  AQIE   +     
Sbjct: 200 GRIEAAAQQNKAALDAFDKALELSPNQPGALLGRAQIELIENQLDAA 246



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 78/198 (39%), Gaps = 10/198 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G   +A++   +A+ +  D   +   + +  ++   +   +  L   +++        
Sbjct: 68  ESGQGRAAEKELRRAISLGVDEGEIALELAKAMLIQGRYQDVLDALQPSRQS-DPARHAE 126

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+++   + +    G +  +  D  ++ KL  +++ A +   +  + Q++  +A   +++
Sbjct: 127 ALIVKGDAGQAL--GKIELACADYQQASKLDADNLSADLGLVRCDVLQDRIDQARARVKR 184

Query: 286 IWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGS 340
              +  HP+ A  +  L       +     L    +  E++     +L+  ++I L    
Sbjct: 185 --LLQQHPKHAQSWIMLGRIEAAAQQNKAALDAFDKALELSPNQPGALLGRAQIELIENQ 242

Query: 341 IDQAHAKAMLAMKIAPRK 358
           +D A A      K+AP  
Sbjct: 243 LDAAEADIEALRKLAPTS 260


>gi|153839872|ref|ZP_01992539.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
           AQ3810]
 gi|149746605|gb|EDM57593.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
           AQ3810]
          Length = 391

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E +++ P     
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                Y E+                           + +V  Y   +EW +AI + NQ  
Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIHYANQLA 168

Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K   + +R R   A      ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRASISLGRIYLE 228

Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
               ++       +LE  K +  +  P IA  Y HL  E+ + +  RA  +++    S E
Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
             ++++++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 288 --LMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 427

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 106/299 (35%), Gaps = 17/299 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+M     +   A        Q+  F    +   L       + Q   A E+ +M + +
Sbjct: 57  QGVMRYNRSDFKAAELAFRKALQEDPFI--PMARYLLGNALFQQGQIAAAAEQYQMAIGL 114

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAI 208
                 A Y+L     + G++  A     +A+ I P+        +   + A  +   A+
Sbjct: 115 DPNMAEAHYNLGLMLYQQGNIEEAISAYQQAIAIDPNLA-AARYNLGLALEAVGDTEAAL 173

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
           +   Q  +         A+     +L  A +  + ++     ++L+     + A      
Sbjct: 174 SEYTQAVRLNPNS----AVAKYNLALLLAKQNQVDSAIAALRQALRNDSQFVQAHYQLGL 229

Query: 269 SLISQNKKRKAEVILEKIWKVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
            L  QN+  +A+    +  ++N      H  +  I+  L   +    ++R   + +I+ +
Sbjct: 230 LLAQQNQITEAKNSFLRATQINSRFAPAHYRLGLIF--LQQGDAEEAIRRFNWVTQIDPD 287

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTDKILY 380
           +V++   +    ++ G  +QA A    A+ + P   +  + L   + +   +      Y
Sbjct: 288 NVDAYRQLGAALIQNGEYEQAIAALERAISLDPYDSLAHYNLAVALHRNQQYEDAISEY 346


>gi|120554540|ref|YP_958891.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
 gi|120324389|gb|ABM18704.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
          Length = 900

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 30/322 (9%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYL----------------LEVQIALAERQYNI 138
           +       A  + +        H E L  L                L+ +  L    ++ 
Sbjct: 105 LGQSERNQAALIRAEARILQGKHQEALESLDQISSPSPDQQLQADNLKGRAWLTSGDFDK 164

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A E  +      +    A+  L   +   GD ++A+    KA++I  +   V     Q  
Sbjct: 165 AEEAYQSAFDKHSNNVVAMVGLSRVATAKGDFDTAKERLEKAIEIDAEHEDVWLWRAQFA 224

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKL 255
              ++W+ A     +  +   +++     +   + A      ++G    ++       K 
Sbjct: 225 HAQQQWAEAEQAYIRALETIGQFDVMTFRKYQTISALITVLREQGKSAEAFVYEEILAKS 284

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI-----YTHLLSENTVG 309
              +I +++ AA S  +      A   L+++    P H + A +     Y     E    
Sbjct: 285 GPGTIKSNLEAAASAYNDGDLNTAARYLQEVLNQVPNHQQSALMLGVIRYRQGRPEEAE- 343

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
             K    L ++ + + E   +++   + M     A +            +   L+  I  
Sbjct: 344 --KLLAPLADM-ENADEVRKLLAATRISMRDPAGAKSLLEDLEGSDADPQTLALVG-IAS 399

Query: 370 ANSHNTDKILYWTQSALHAMPD 391
             S +        + +L   PD
Sbjct: 400 LASGDDQSGRQLLEKSLELAPD 421



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 51/255 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            N   AR       Q H   +    Y +E      + ++  A E  ++ L    T E   
Sbjct: 680 GNATAARSALQDAKQHH--PDSPAPYQVEASYYENQGEHQQAAELYQLALAKRQTAEL-- 735

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                          A  +A                       A     +I  L +  K 
Sbjct: 736 ---------------AIAHAR------------------ALSNAGRSQNSIEALQEANKQ 762

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                 N + +L+  +L+    G   A+     + L+L  ++ +A    A          
Sbjct: 763 FP----NNSSILLTLALQTQQAGQTDAAIEHYQQVLQLTPDNALALNNLAWLYYEAGN-S 817

Query: 278 KAEVILEKIWKVNP-HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331
           +A  + ++ +++ P +  IA+ Y  +       E ++  L+RA  L     +S E  + +
Sbjct: 818 EAASLAKRAYELVPENAAIADTYGWILFEAGEHEQSLAVLERAHSLA---PDSQEIAMHL 874

Query: 332 SKIALEMGSIDQAHA 346
           ++     G  D A  
Sbjct: 875 AEAYRATGRTDAAQQ 889



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 92/252 (36%), Gaps = 17/252 (6%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL  G++         A K+ + ++          V  L     ++ R    A   LE +
Sbjct: 326 ALMLGVIRYRQGRPEEAEKLLAPLADMENADE---VRKLLAATRISMRDPAGAKSLLEDL 382

Query: 147 L---QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
                 P T   A+  +   +   GD  S ++   K+L+++PD   +           ++
Sbjct: 383 EGSDADPQT--LALVGIASLA--SGDDQSGRQLLEKSLELAPDNHNLRLRYAAYLTQTRD 438

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           ++ AI     ++  +      +A +L +++      G+   +       LK   +S+ A 
Sbjct: 439 FANAIK--QARQIPSDATEALQATILTSQAQAL--SGNSQTATDTLDTWLKANPDSMAAL 494

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEI 320
           I       S N  ++A    E+  K +P    P +A        +NT   +    +  E 
Sbjct: 495 IARGNLASSLNNTQQAASYFERAHKQHPEEAAPLVALGNLAREQQNTEQAIAWYRQAVET 554

Query: 321 NKESVESLVIVS 332
           N  ++ ++  ++
Sbjct: 555 NPNNLPAIQALA 566



 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 91/298 (30%), Gaps = 23/298 (7%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV--------QIALAERQYNIAHEKLEM 145
           ++  ++   A ++ + + ++           L          Q+A  E            
Sbjct: 599 ALINNDTLQADELTARLMEREREDQPSPAEPLVAAVYEGIATQMAQRENSERALEILSRG 658

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
               P     A+     E    G+  +A+     A    PD+P   +     Y    E  
Sbjct: 659 RTLFPENEAIALKVAAIEF-SNGNATAARSALQDAKQHHPDSPAPYQVEASYYENQGEHQ 717

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +A               R  A L IA +   ++ G    S     E+ K   N+    + 
Sbjct: 718 QAAELYQLAL-----AKRQTAELAIAHARALSNAGRSQNSIEALQEANKQFPNNSSILLT 772

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTHLLSENTVGKLKRALRLEEI 320
            A       +   A    +++ ++ P   +A      +Y    +       KRA  L   
Sbjct: 773 LALQTQQAGQTDAAIEHYQQVLQLTPDNALALNNLAWLYYEAGNSEAASLAKRAYELV-- 830

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
             E+         I  E G  +Q+ A    A  +AP  +EI + LA+  +A       
Sbjct: 831 -PENAAIADTYGWILFEAGEHEQSLAVLERAHSLAPDSQEIAMHLAEAYRATGRTDAA 887



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 23/305 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +  G ++ + +N   A        +QH      LV L    +A  ++    A       +
Sbjct: 495 IARGNLASSLNNTQQAASYFERAHKQHPEEAAPLVAL--GNLAREQQNTEQAIAWYRQAV 552

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT--------EAVVQQYV 199
           +       A+ +L     R        +      +IS   P            A++    
Sbjct: 553 ETNPNNLPAIQALAGVMKRD-------QLTGLMQEISSKHPEANGPRLILLESALINNDT 605

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
           L  +   A     +++          A +    + + A + +   +         L   +
Sbjct: 606 LQADELTARLMEREREDQPSPAEPLVAAVYEGIATQMAQRENSERALEILSRGRTLFPEN 665

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRAL 315
              ++  A    S      A   L+       HP+    Y    ++  ++    +     
Sbjct: 666 EAIALKVAAIEFSNGNATAARSALQDA--KQHHPDSPAPYQVEASYYENQGEHQQAAELY 723

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +L    +++ E  +  ++     G    +      A K  P     LL   ++   +  T
Sbjct: 724 QLALAKRQTAELAIAHARALSNAGRSQNSIEALQEANKQFPNNSSILLTLALQTQQAGQT 783

Query: 376 DKILY 380
           D  + 
Sbjct: 784 DAAIE 788


>gi|254429756|ref|ZP_05043463.1| HemY N-terminal domain protein [Alcanivorax sp. DG881]
 gi|196195925|gb|EDX90884.1| HemY N-terminal domain protein [Alcanivorax sp. DG881]
          Length = 410

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 115/392 (29%), Gaps = 29/392 (7%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           L+    +++ +      ++     V I   +    T+   ++ +      A ++L  +  
Sbjct: 6   LLIIIALVAALALG-RWMAADSGYVLIIRDSVSVDTTLGFVVLMALLGAVALVVLTLLGN 64

Query: 64  FFLSC--PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
              +   P        K   ++    L +G + +       A ++     +        +
Sbjct: 65  AAWNAMEPVRATRRWKKAVAERR---LRSGFLQLVDGEQEKAERLLVAAGED--GDWPLV 119

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYATK 179
            +LL  + A  + +   +   LE        R  A   L     +   G    A+     
Sbjct: 120 AWLLAAEAAQEQDKVEASQHYLEQASTDRRGRLVA--GLMKARFALDDGYPEQARSELKV 177

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIARSLEN 236
             D++P    +     +     K+W         L +    A +  R R   L       
Sbjct: 178 LADMAPRNKRILNTYAEVLESQKDWQALCALMPRLKRAFGEANQARRERRAWLAWLQETA 237

Query: 237 ADKG--DMIASYHDAIESLKLCDNSI---MASICA-AKSLISQNKKRKAEVILEK----I 286
              G  D  +   +  +  K     +    A +   A  L      R A  ++ +     
Sbjct: 238 RKPGFNDADSRRDELRKLWKDVPVHLKNDPAMVARYAGFLAQLGGGRGALNLVREQLGNQ 297

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           W     P +      +  ++ +  L    +       +   L+   ++AL+     +A  
Sbjct: 298 WDDRLPPVL-EAIDDIPPDDLLQVL---EKWLVERPGNASVLITAGRVALKARLWGKAQG 353

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
               A   +        LA++ +A   ++  +
Sbjct: 354 FFEAAANSSQSATALAELARLYRALGDSSKAM 385


>gi|83594187|ref|YP_427939.1| hypothetical protein Rru_A2855 [Rhodospirillum rubrum ATCC 11170]
 gi|83577101|gb|ABC23652.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 937

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 77/268 (28%), Gaps = 14/268 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMML 147
            G+   A      AR+       +          L  LE++ A +      A E     +
Sbjct: 188 RGVALAALGEGEAAREAFKNAILRDGAAPMAWTNLGNLEIRAARSADALERAVEAYGQAI 247

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +       A  +L      +G  + A  +A +A  + P    V           +    A
Sbjct: 248 RRAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPHDVTVLNTQANILRGLRRVDEA 307

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  L +        +   A       L      D   +     ++  L  + +   +  A
Sbjct: 308 VAILERALA----CDGRSAETHSNLGLALLAAQDRQRAEEHFRKAAALAPDCVDIIVNLA 363

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKLKR-ALRLEEINKES 324
             LI  N  ++   +LE      P     +A +  H   EN           +     + 
Sbjct: 364 CFLIHINAGKEVLGVLEPALARFPGDVGLLATLGLHYFQENAYEDCATVFETVLAKKPDH 423

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAM 352
           VE     ++ +L +    Q      LA+
Sbjct: 424 VE-----ARASLGVVRWSQGRLVESLAL 446



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 90/312 (28%), Gaps = 52/312 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNE-------YLVYLLEVQ--------IALAERQ 135
           GL  +A      A +            +         LV +L+ Q        +      
Sbjct: 50  GLTRVALGRPLEAEQPLRRALALDPIDDPFHARAVCALVDVLKAQGRMAEVSEVLERAGD 109

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIG------DLNSAQRYATKALDISPDAPW 189
               +     ML     R          + R        D  + +  A   L  +P    
Sbjct: 110 VAPMNAVFPRMLGAHY-RALGQVGAAITAARRAVAVESADGENWRGLAATLLGGAPG--E 166

Query: 190 VTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWN--------RNRAILLIARSLENAD 238
             EA+ +         +W              +           R+ A  +   +L N +
Sbjct: 167 ALEALERAKTCGDDGADWWNIRGVALAALGEGEAAREAFKNAILRDGAAPMAWTNLGNLE 226

Query: 239 --KGDMIASYHDAIES----LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                   +   A+E+    ++   +S  A    A++L    ++ +A V  E+   + PH
Sbjct: 227 IRAARSADALERAVEAYGQAIRRAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPH 286

Query: 293 PEI------ANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            ++      ANI   L   +  V  L+RA      +  S E+   +    L      +A 
Sbjct: 287 -DVTVLNTQANILRGLRRVDEAVAILERA---LACDGRSAETHSNLGLALLAAQDRQRAE 342

Query: 346 AKAMLAMKIAPR 357
                A  +AP 
Sbjct: 343 EHFRKAAALAPD 354


>gi|328474640|gb|EGF45445.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus 10329]
          Length = 391

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 109/343 (31%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E +++ P     
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                Y E+                           + +V  Y   +EW  AI + NQ  
Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWENAIHYANQLA 168

Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K   + +R R   A      ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRASISLGRIYLE 228

Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
               ++       +LE  K +  +  P IA  Y HL  E+ + +  RA  +++    S E
Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
             ++++++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 288 --LMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|167580199|ref|ZP_02373073.1| HemY protein N-terminus family [Burkholderia thailandensis TXDOH]
          Length = 396

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 124/398 (31%), Gaps = 22/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S    +  +     A   L  
Sbjct: 3   LRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   ++ + +L   L ++ A     A K               
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQAAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178
            +       A A  + +    + + + ++          L     R    D   A     
Sbjct: 123 SLI-----AAAATHRMHEYARRDDWLAKVNGQEWQDARLLATADMRADGRDAEGALAALA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237
           +            +  ++     K WS  +    +  +  +  +   A+ L  ++ E+  
Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWSEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236

Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D   ++  +     + +        +  AA+ LI+  ++++A  I+E     N +
Sbjct: 237 RDRRHDADALLEVWQTLSATERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A        +  + L  + ++  +     +A +    A+
Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +          ++ +SAL
Sbjct: 354 KLADDEPLKIRAHRALARLFEHLGETDKAAQHYRESAL 391


>gi|315186031|gb|EFU19794.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 649

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   A +  +  L          + Y+L            A  YA KA+D++P 
Sbjct: 406 TYYLAGRLQDAEKAFKEALSTEKGSDDPVSAYNLALVLIEEDKAQEALSYAQKAVDLAPR 465

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P     +         ++ A T   +  +   ++ + R  L     L + DKG+   + 
Sbjct: 466 VPEYQYTLGLAAYKLGAYTVAETAFGKAIELKPDYVKPRVQL----GLLHQDKGEDDKAL 521

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTH 301
              +E+ KL   S   +         +    ++        + +P        +A  Y  
Sbjct: 522 SLLLEAYKLEPTSFEVNNNLGNLYARKKLYSESIKHYRAAIEADPKDTLVRYNLALSYLD 581

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               +   ++     L +I+    ++   + K+ + +   + A       ++  P    +
Sbjct: 582 AKEYDEAVRV--FQELLKIDPSYWDAYYQLGKLLITLEDSEGAKKVLSTLLEKKPD---Y 636

Query: 362 LLLAQIEQANSH 373
              A++E+  S 
Sbjct: 637 SRRAEVEKLLSG 648


>gi|288818802|ref|YP_003433150.1| tetratricopeptide repeat family protein [Hydrogenobacter
           thermophilus TK-6]
 gi|288788202|dbj|BAI69949.1| tetratricopeptide repeat family protein [Hydrogenobacter
           thermophilus TK-6]
 gi|308752388|gb|ADO45871.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 545

 Score = 64.2 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 90/285 (31%), Gaps = 9/285 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
               + + +             + L      L   +   A   +E + +         Y 
Sbjct: 99  GQKDKALSALEEGYRLLPKSKEIMLFLADEYLRSGENKKAKAVIENLAKESPDNPLPYYM 158

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G+   A  Y  K+L I          +   Y  + E+++A        K + 
Sbjct: 159 LARIYLSEGNKELAIHYLEKSLQIKSSFEAGFITLGSIYEESGEYTKAEQLYKDVLKTSP 218

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +      + L   +        +  +        +L       +   A  LI  +K  KA
Sbjct: 219 DNK----VALERLANLYVLTNRLEEAQDIYERLARLYPE-ENYAYQYALVLIRSSKYDKA 273

Query: 280 EVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVESLVIVSKIAL 336
           E IL +++   P + E+A  Y  +L       L R    RL + +  + + +  ++ I +
Sbjct: 274 EKILSELYSKYPDNLEVAYTYGLVLEMEKKTDLARQVYERLYKKDPTNTKVIERLAGIYI 333

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILY 380
           +     +AH      + + P+     LL+  +      +   + Y
Sbjct: 334 DAKDYQKAHEILKKGLSLDPKSYQLNLLMGSLLNEEGKSEQALSY 378



 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 96/299 (32%), Gaps = 32/299 (10%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFA 156
            LA++M      +H +  E   YL    +     Q + A     E   ++ +      F 
Sbjct: 72  ELAKRM------KHLYPKEQASYLTLHSVYSLMGQKDKALSALEEGYRLLPKSKEIMLF- 124

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L  E  R G+   A+         SPD P     + + Y+       AI +L +  +
Sbjct: 125 ---LADEYLRSGENKKAKAVIENLAKESPDNPLPYYMLARIYLSEGNKELAIHYLEKSLQ 181

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
               +    A  +   S+   + G+   +     + LK   ++ +A    A   +  N+ 
Sbjct: 182 IKSSFE---AGFITLGSI-YEESGEYTKAEQLYKDVLKTSPDNKVALERLANLYVLTNRL 237

Query: 277 RKAEVILEKIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A+ I E++ ++ P    A  Y    + S       K    L     +++E       +
Sbjct: 238 EEAQDIYERLARLYPEENYAYQYALVLIRSSKYDKAEKILSELYSKYPDNLEVAYTYG-L 296

Query: 335 ALEMG-SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS-----HNTDKILYWTQSALH 387
            LEM    D A        K  P          IE+         +  K     +  L 
Sbjct: 297 VLEMEKKTDLARQVYERLYKKDPTNTKV-----IERLAGIYIDAKDYQKAHEILKKGLS 350



 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 22/228 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
           +  +   A+ Y  +AL+  P      + + ++  +  KE       L   K+    + + 
Sbjct: 30  QQENPKKAETYCIRALERLPTPTLFVDTIRLELLLKRKE-----KALELAKRMKHLYPKE 84

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A  L   S+ +   G    +     E  +L   S    +  A   +   + +KA+ ++E
Sbjct: 85  QASYLTLHSVYSL-MGQKDKALSALEEGYRLLPKSKEIMLFLADEYLRSGENKKAKAVIE 143

Query: 285 ---KIWKVNPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              K    NP P   +A IY  L   N    +    +  +I        + +  I  E G
Sbjct: 144 NLAKESPDNPLPYYMLARIY--LSEGNKELAIHYLEKSLQIKSSFEAGFITLGSIYEESG 201

Query: 340 SIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQANSHNTDKIL 379
              +A       +K +P           +++L  ++E+A         
Sbjct: 202 EYTKAEQLYKDVLKTSPDNKVALERLANLYVLTNRLEEAQDIYERLAR 249


>gi|295675860|ref|YP_003604384.1| HemY domain protein [Burkholderia sp. CCGE1002]
 gi|295435703|gb|ADG14873.1| HemY domain protein [Burkholderia sp. CCGE1002]
          Length = 396

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/407 (12%), Positives = 122/407 (29%), Gaps = 45/407 (11%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63
           L+    + ++ +   +        V + +       S  + +  L         L  + R
Sbjct: 6   LLWLAALFAVAVMLAVGGRFDAGQVLLIYPPYRVDMSLNLFIVGLVVLFILLYALLRIIR 65

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV------------- 110
                P  +     +    K + AL   + ++ A     A K                  
Sbjct: 66  NIWRMPQRVAAYRARARVAKAHAALRDAIGNLYAGRFSRAEKAAKDALTNGDNKGAAGLI 125

Query: 111 --SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
             +  H  H          QI  AE  +  A      ++     R               
Sbjct: 126 AATAAHRMHEYGRRDEWLAQIDEAE--WQDAR-----LMATADMRADGR----------- 167

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRN 224
           D + A    T+            + +++     K W   +  +     ++  +     R 
Sbjct: 168 DADGALHALTEMQSQGARRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVAVRL 227

Query: 225 RAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           R +       +     D +     ++ +  +        +  AA+ L++ N+ ++A  I+
Sbjct: 228 RQLAAENLLRDRRHNADALLELWSSLSATERHSPRL---ADTAAELLVALNRPQEARKIV 284

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           E+    N    +   Y    + + +  +++A    +   E  + +  + ++ L      +
Sbjct: 285 EEALAQNWDARLLRRYPDTAAGDALPLIQKAEAWLKDRPEDADLMFALGRLCLHQQLWGK 344

Query: 344 AHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           A +    A+K+A  +         LA++ +          ++ +SAL
Sbjct: 345 AQSFLERALKLADNETLKIRSHRALARLHEQLGDTDKASQHYRESAL 391


>gi|223940440|ref|ZP_03632292.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223890885|gb|EEF57394.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 803

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 106/348 (30%), Gaps = 32/348 (9%)

Query: 28  VSITWGNRLYRTSP----FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           + +TWG      S      +I S     L +  +L A           LF        D 
Sbjct: 374 IVVTWGICEMAASLKLPNSLISSAAVLILISCGVLTASQLQIWQNSVTLFKHTLDVTRD- 432

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSY-VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
               +    +  A H +    +  +   +      NE    L    +   +  Y  A E 
Sbjct: 433 --NVIARENLGFAYHELKQYDEAFNEFSAALKINPNEPHALLGMGMLCSDKGDYQKAIEY 490

Query: 143 LEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE----A 193
               L+        TR     +L+ +        +A +Y  +AL + PD           
Sbjct: 491 FNAALKNKIPRYAVTRLLLGNALFDQGKL---PEAADQY-REALRVEPDLLDANHRLGLV 546

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + +  +       AI++ N + +   +    R +L           G++ A+      +L
Sbjct: 547 LFKLNLTR----EAISYFNAELRVESDLPDTRYLLGECYKKL----GNLTAAIAHYQSAL 598

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGK 310
           ++  + I A       L  Q    +A+   ++I ++ P  E+A+                
Sbjct: 599 EITPDFIPARQQLGILLAQQGNTSEAQRHFQRIVELQPTNELAHFSLAATLELQGKLDEA 658

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                +   +     E+L  ++ I +       A      A K+ P  
Sbjct: 659 AAHFSQAVRLAPTDYEALRRLAGIFVRQRQFGPAIQNLRYAEKLQPDS 706



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 21/233 (9%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            + A    + AL I+P+ P    A++          ++ +AI + N   KN        A
Sbjct: 450 YDEAFNEFSAALKINPNEP---HALLGMGMLCSDKGDYQKAIEYFNAALKNKIP---RYA 503

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  +       D+G +  +     E+L++  + + A+      L   N  R+A       
Sbjct: 504 VTRLLLGNALFDQGKLPEAADQYREALRVEPDLLDANHRLGLVLFKLNLTREAISYFNAE 563

Query: 287 WKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +V    P+    +   Y  L +      +       EI  + + +   +  +  + G+ 
Sbjct: 564 LRVESDLPDTRYLLGECYKKLGNLTAA--IAHYQSALEITPDFIPARQQLGILLAQQGNT 621

Query: 342 DQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTDKILYWTQSALH-AMPD 391
            +A       +++ P  E+  F L A +E     +          A+  A  D
Sbjct: 622 SEAQRHFQRIVELQPTNELAHFSLAATLELQGKLDEAAAH--FSQAVRLAPTD 672



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +L  Q    +   + A    + ++++  T E A +SL       G L+ A  + ++A+ +
Sbjct: 613 ILLAQ----QGNTSEAQRHFQRIVELQPTNELAHFSLAATLELQGKLDEAAAHFSQAVRL 668

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-ENADKGDM 242
           +P        +   +V  +++  AI  L   +K   +  +  A L    +     +  + 
Sbjct: 669 APTDYEALRRLAGIFVRQRQFGPAIQNLRYAEKLQPDSPKILANLASLLASCPQPELRNG 728

Query: 243 IASYHDAIESLKLCD---NSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             +   A ++ +L D     +     A A+     +  + A+ + E+    N    +A+ 
Sbjct: 729 PEALQLAQKAYELSDKSLTFLSILDVAYARIGQFDDAIKTAQKVQEQA-VANNQRSLADA 787

Query: 299 YT 300
             
Sbjct: 788 AA 789



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 54/195 (27%), Gaps = 43/195 (22%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++     N   A++    + +    +   L +         + + + A       +++ 
Sbjct: 612 GILLAQQGNTSEAQRHFQRIVELQPTN--ELAHFSLAATLELQGKLDEAAAHFSQAVRLA 669

Query: 151 ATREFAVYSL------------------YFESCRIGDLN--------------------- 171
            T   A+  L                  Y E  +                          
Sbjct: 670 PTDYEALRRLAGIFVRQRQFGPAIQNLRYAEKLQPDSPKILANLASLLASCPQPELRNGP 729

Query: 172 SAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            A + A KA ++S  +     +++   Y    ++  AI    + ++ A   N+       
Sbjct: 730 EALQLAQKAYELSDKSL-TFLSILDVAYARIGQFDDAIKTAQKVQEQAVANNQRSLADAA 788

Query: 231 ARSLENADKGDMIAS 245
           A+ LE    G     
Sbjct: 789 AQRLELYRAGKAYEQ 803


>gi|320159497|ref|YP_004172721.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1]
 gi|319993350|dbj|BAJ62121.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1]
          Length = 409

 Score = 63.8 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 83/256 (32%), Gaps = 25/256 (9%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA--------TREFAVYSLYFESCRIG 168
                +L E +   AE ++  A    +  +   P          R  A+Y  Y E+ +  
Sbjct: 55  RSPESFLQEARAFAAEGRFTQAEAAYQQALQADPKNITIYLELARLQALYGKYAEAQKN- 113

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
                   A  A+ ++P++            L  E+  A   LN+  +         A L
Sbjct: 114 --------AENAILLNPNSSLAHAIHGWALGLQGEYLPAQAELNKAIEIEPGNGLAYAYL 165

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAEVILEKI 286
               +L+  +  D   +   AIE+ +         +    A+  + +     A+ ++   
Sbjct: 166 AEVLALQKIEGKDDPTTLEKAIEASRKAVELAPDQMESYRARGYVLEITSNYADAVVAFQ 225

Query: 287 WKVNPHPEIANIYTHL-LSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSI 341
             +  +  +A+++  L  +          ++   +   +  +     V  +   L  G  
Sbjct: 226 QAIALNDNLADLHLALGRNYKAQDIYDKAIEEFNKAIALRPDDPRPYVETALTYLRYGEY 285

Query: 342 DQAHAKAMLAMKIAPR 357
            +A   A  A++  P 
Sbjct: 286 AKAAQYAEQAIQQDPT 301


>gi|238751920|ref|ZP_04613406.1| hypothetical protein yrohd0001_32510 [Yersinia rohdei ATCC 43380]
 gi|238709900|gb|EEQ02132.1| hypothetical protein yrohd0001_32510 [Yersinia rohdei ATCC 43380]
          Length = 389

 Score = 63.8 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W+ AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLIIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMSSDDLDKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAASADKQCARVSIMQGRLYLAKGEYAKGVDALERVLQQDKEVVSEALPLLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
 gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
          Length = 810

 Score = 63.8 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 13/234 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + + + A    +  +Q+      A   L       G  + A     KA+ ++P+  
Sbjct: 276 ALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFA 335

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +  +   + N   A   +  +L   ++G    +   
Sbjct: 336 LAYNGLGNALSDQGKRDEAIAAYQKAIQ--LDPNDANAYNNLGLAL--RNQGKRDEAITA 391

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             ++++L  N  +A      +L SQ K+ +A    +K  ++N  P  A  Y +L      
Sbjct: 392 YQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLN--PNFALAYNNL-GNALS 448

Query: 309 GKLKRALRLEE------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + KR   +        +N     +   +     + G +++A A    A+++ P
Sbjct: 449 DQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNP 502



 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 11/233 (4%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + + + A    +  +Q+      A  +L     + G L  A     KA+ ++P+  
Sbjct: 208 ALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLA 267

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +  +    +    A+         +D+G    +   
Sbjct: 268 EAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNF----ALAYNGLGNALSDQGKRDEAIAA 323

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303
             ++++L  N  +A      +L  Q K+ +A    +K  +++  P  AN Y +L      
Sbjct: 324 YQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLD--PNDANAYNNLGLALRN 381

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  +    +  ++N     +   +       G  ++A A    A+++ P
Sbjct: 382 QGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNP 434



 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 84/241 (34%), Gaps = 19/241 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + + + A    +  +Q+      A  +L       G  + A     KA+ ++P+  
Sbjct: 344 ALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFA 403

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +  +    +    A+         +D+G    +   
Sbjct: 404 LAYNNLGNALYSQGKREEAIAAYQKAIQLNPNF----ALAYNNLGNALSDQGKRDEAIAA 459

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---- 304
             ++++L  N  +A      +L  Q K  +A    +K  ++N  P  A  Y +L +    
Sbjct: 460 YQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLN--PNFALAYNNLGNALKD 517

Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALEM-----GSIDQAHAKAMLAMKIA 355
                  +   ++AL L E    +  +   ++   L +     G +++A  +   A+KI 
Sbjct: 518 QGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPEGKLEEALREYEAALKID 577

Query: 356 P 356
           P
Sbjct: 578 P 578



 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 84/236 (35%), Gaps = 11/236 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + + A    +Y  A      ++++      A  +L       G L+ A     KA+ ++P
Sbjct: 35  QGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNP 94

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +       +        +   AI    +  +    +   +A   +  +L   D+G +  +
Sbjct: 95  NDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNF--AQAYNNLGNALS--DQGKLEEA 150

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--- 302
                ++++L  N   A      +L  Q K  +A    +K  ++N  P  A+ Y +L   
Sbjct: 151 IAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLN--PNYADAYYNLGVA 208

Query: 303 --LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                     +    +  +++     +   +     + G +++A A    A+++ P
Sbjct: 209 LFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 4/135 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + + + A    +  +Q+      A  +L       G LN A     KA+ ++P+  
Sbjct: 446 ALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFA 505

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIA 244
                +        + + AI    +        +        +      L    +G +  
Sbjct: 506 LAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPEGKLEE 565

Query: 245 SYHDAIESLKLCDNS 259
           +  +   +LK+    
Sbjct: 566 ALREYEAALKIDPKF 580


>gi|67459221|ref|YP_246845.1| hypothetical protein RF_0829 [Rickettsia felis URRWXCal2]
 gi|67004754|gb|AAY61680.1| unknown [Rickettsia felis URRWXCal2]
          Length = 334

 Score = 63.8 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 119/349 (34%), Gaps = 28/349 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+   F ++  +   V I+  +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGFTLIESFDSKVFISLYDYNIETTLFFSLILGLLLLISCFIVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116
                +  P+ + ++ +KR  +     L   +++ A    ++    A      +S +   
Sbjct: 61  FLILIIDLPSKIHNIFNKRKVNHDRYTL---ILAFAEYIMSNKAKSASIARKNLSSEDLK 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    L+           +      + ++       +   +L            A+ Y
Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSLYEKAENY 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235
           ATKA + +         +++ Y     W++ I   N+  K +  E     A   +  + +
Sbjct: 175 ATKAYNFNELDSDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234

Query: 236 NADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWKV 289
             +  +   +      AI+     D  +       +   + N K    K   IL+  +++
Sbjct: 235 EVESNNTANAIDYLETAIDLNFYNDELL-------EFYFNLNDKLNVNKKTKILKDAFRI 287

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALE 337
            P  ++  ++    S +          L  +++ +  E L++  +  LE
Sbjct: 288 IPSLKLVQLFKKFTSLSDRQI---YEELTQQLDAKKDEILILAIEAYLE 333


>gi|262393796|ref|YP_003285650.1| putative heat shock protein [Vibrio sp. Ex25]
 gi|262337390|gb|ACY51185.1| putative heat shock protein [Vibrio sp. Ex25]
          Length = 373

 Score = 63.8 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 110/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E +++ P     
Sbjct: 65  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 120

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                Y E+                           + +V  Y   +EW +AI + NQ  
Sbjct: 121 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIYYANQLA 150

Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K   + +R RA +       ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 151 KLGNKRSRMRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLE 210

Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
                   +    +LE  K +  +  P IA  Y HL  E+ + +  RA  +++    S E
Sbjct: 211 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 269

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
             ++++++     ++  A       +   P  + F  L    I +A      +       
Sbjct: 270 --LMLAQLVAHHENVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 323

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 324 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 364


>gi|322833306|ref|YP_004213333.1| tetratricopeptide repeat protein [Rahnella sp. Y9602]
 gi|321168507|gb|ADW74206.1| tetratricopeptide repeat protein [Rahnella sp. Y9602]
          Length = 389

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 91/256 (35%), Gaps = 25/256 (9%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    + +       +
Sbjct: 83  GEVDRAIRIHQSLMESASLTFEQRLLAVQQLGRDYMAAGFYDRAEDMFNQLVKEQDFQLF 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLENADKGDMIAS 245
             E ++  +    +W  AI    +  K  KE  R         L  +++ + D       
Sbjct: 143 ALEQLLIIHQATSDWQNAIDVAERLVKLGKENRRKEIAHFWCELALQAMVSEDFDKATGL 202

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILE--KIWKVNPHPEIANIY 299
              A  + KLC      SI   + L++Q   RKA      +LE  K       P +   Y
Sbjct: 203 LKKAAAADKLCAR---VSIMQGRILLAQGDYRKATEALQRVLEQDKELVSEALPMLQECY 259

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +L  ++T+   +   R  + N  +  + +++++I  +    + A       ++  P   
Sbjct: 260 QNL--DDTLAWAEFLRRCVDENTGAT-AELMLAEIIQDEEGRETAQNYINRQLQRHPTMR 316

Query: 360 IF-LLL----AQIEQA 370
           +F  L+    A  E+ 
Sbjct: 317 VFHHLMDYHLADAEEG 332


>gi|292493243|ref|YP_003528682.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
           Nc4]
 gi|291581838|gb|ADE16295.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
           Nc4]
          Length = 930

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 83/243 (34%), Gaps = 41/243 (16%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L   L   + L + +   A E     L+I      A ++L   + + GD+  A+ +
Sbjct: 473 PQSPLPLNLIGGVYLGKGEETKAQEAFHEALEIAPGNPSATHNLAALALKKGDIEKARSF 532

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             + L   P        +++          A+                            
Sbjct: 533 YQETLKHHPGHL---RTLLKL--------GALET-------------------------- 555

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
             +G +  +     +++     ++   I  A+  + + K  ++  ++ ++  + P HP +
Sbjct: 556 -QQGHVEKAKTWVEQAMGKNPKALAPRILLARYYLDKGKPTRSLALIREVQALYPNHPSL 614

Query: 296 ANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
             +     L +      ++   +L E   +S ++  +++K      ++D+   +   A++
Sbjct: 615 LAVMGTAQLATNQPTNGIETLQKLVEAQPQSAQAHYLLAKAYSATNNVDKLRGELNQALE 674

Query: 354 IAP 356
           + P
Sbjct: 675 LDP 677



 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 22/273 (8%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLE-MMLQI 149
           +++   +I  AR  +    + H  H   L+ L  LE Q    +     A   +E  M + 
Sbjct: 519 LALKKGDIEKARSFYQETLKHHPGHLRTLLKLGALETQ----QGHVEKAKTWVEQAMGKN 574

Query: 150 PATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           P  +  A   L        G    +     +   + P+ P +   +    +   + +  I
Sbjct: 575 P--KALAPRILLARYYLDKGKPTRSLALIREVQALYPNHPSLLAVMGTAQLATNQPTNGI 632

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +      E     A      +   +   ++     +  ++L+L  N  ++ I    
Sbjct: 633 ETLQK----LVEAQPQSAQAHYLLAKAYSATNNVDKLRGELNQALELDPNHALSKIAMTH 688

Query: 269 SLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+ +NK  +A  +   L++ +  +P       +  +        +       E  K S 
Sbjct: 689 LLMHENKPNEANKLFQELKQAYPEHPEVLAQEGWLAMRQNQPQKAVAAFK---EALKHSP 745

Query: 326 ESLVIV--SKIALEMGSIDQAHAKAMLAMKIAP 356
            S +IV  +    + G+ D++ A     +K  P
Sbjct: 746 TSQIIVNLALAQFQAGNQDRSLATLEDWLKKHP 778



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 7/127 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER---QYNIAHEKLEMMLQIPATRE 154
            N P A K      +           L   ++AL +        A      + +      
Sbjct: 81  GNGPAAEKELKQALRLGLAPETAATSL--ARVALMQGKFQDVTDASTNYPGLSENERAEL 138

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+    +          A++    AL + P+         +     K + +A  +L++ 
Sbjct: 139 LALQGHAYLGLHE--FEKAEKLYDSALSLQPNVAEANLGKAEIAAAQKRFDKAREWLDKI 196

Query: 215 KKNAKEW 221
            + +  +
Sbjct: 197 LQTSPAF 203



 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 39/188 (20%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I+R+ E  DKG++ A+  +   +L+   ++  A    A+  +       AE  L++  +
Sbjct: 36  HISRAKEYQDKGEIRAAIIELKNALQKTPDNQEARWLLAQVYVKVGNGPAAEKELKQALR 95

Query: 289 VNPHPEIANI---------------------YTHLLSENTVGKLK-------------RA 314
           +   PE A                       Y  L        L              +A
Sbjct: 96  LGLAPETAATSLARVALMQGKFQDVTDASTNYPGLSENERAELLALQGHAYLGLHEFEKA 155

Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQ 369
            +L      +     E+ +  ++IA      D+A       ++ +P     + LL  +E+
Sbjct: 156 EKLYDSALSLQPNVAEANLGKAEIAAAQKRFDKAREWLDKILQTSPAFAPAWSLLGDLER 215

Query: 370 ANSHNTDK 377
              +    
Sbjct: 216 YQGNAEAA 223



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 66/216 (30%), Gaps = 44/216 (20%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFE---SCRIGD 169
           H      + +LL     + E + N A++  + + Q  P   E     L  E   + R   
Sbjct: 679 HALSKIAMTHLL-----MHENKPNEANKLFQELKQAYPEHPEV----LAQEGWLAMRQNQ 729

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------- 220
              A     +AL  SP +  +    +     A    R++  L    K   E         
Sbjct: 730 PQKAVAAFKEALKHSPTSQIIVNLAL-AQFQAGNQDRSLATLEDWLKKHPEDMLAQYNLA 788

Query: 221 ------WNRNRAILLIARSLE--------------NADKGDMIASYHDAIESLKLCDNSI 260
                      A+   A+ +E                 K D   +   A  +L +  NS 
Sbjct: 789 NLYLALKQEQEAVSAFAKVVEQAPNNVTALNNLAWLLRKDDPAKALTYAERALDIAPNSP 848

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
                    L+ + + ++   +L K     P +P+I
Sbjct: 849 PVMDTLGMLLLEKGETKRGLSLLAKASNRTPKNPDI 884



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 1/108 (0%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             + LA +Q   A      +++       A+ +L +   R  D   A  YA +ALDI+P+
Sbjct: 788 ANLYLALKQEQEAVSAFAKVVEQAPNNVTALNNLAWL-LRKDDPAKALTYAERALDIAPN 846

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           +P V + +    +   E  R ++ L +      +    R    +A + 
Sbjct: 847 SPPVMDTLGMLLLEKGETKRGLSLLAKASNRTPKNPDIRYHFALALAR 894



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 117/337 (34%), Gaps = 33/337 (9%)

Query: 32  WGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK--RNYDKGYKALY 89
           W +++ +TSP         F  AW LL  + R+  +  A            ++     L 
Sbjct: 192 WLDKILQTSP--------AFAPAWSLLGDLERYQGNAEAAEQAYGEAITHRFNNAEDLLN 243

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMM 146
             L+ I   N   A      + +Q   ++  + Y   LL+ Q    + +Y  A    +  
Sbjct: 244 RTLIRIYLKNYEGATDDLGTLKKQGV-NHPGVAYTEGLLDFQ----QNKYADALAAFQKS 298

Query: 147 LQIPA--TREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           L+  +          L  Y +    G    A+++ ++ L   P +    +A+    +   
Sbjct: 299 LRQNSKYMPAVFYAGLSYYMQ----GQFKQAEQHLSQFLARFPHSDIAAKALAAARLRRG 354

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +++ A + L        +        L         +G    S     +      +S  A
Sbjct: 355 DYTGAESVLESVLNQNPD----DIAALDLMGNVVLGQGKPEQSTTYFQKITTQAPDSAAA 410

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEE 319
            +    S +   +  +    LEK  +++   P  ++  I  HL +      L  A RL+E
Sbjct: 411 YMKLGLSFMMSGEHEQGIDTLEKAIELDSQLPQADLLVILGHLRAREFDKALTTAERLQE 470

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +S   L ++  + L  G   +A      A++IAP
Sbjct: 471 KQPQSPLPLNLIGGVYLGKGEETKAQEAFHEALEIAP 507


>gi|292486672|ref|YP_003529542.1| protein hemY [Erwinia amylovora CFBP1430]
 gi|292897909|ref|YP_003537278.1| Porphyrin biosynthetic protein [Erwinia amylovora ATCC 49946]
 gi|291197757|emb|CBJ44852.1| Porphyrin biosynthetic protein [Erwinia amylovora ATCC 49946]
 gi|291552089|emb|CBA19126.1| Protein hemY [Erwinia amylovora CFBP1430]
 gi|312170738|emb|CBX79000.1| Protein hemY [Erwinia amylovora ATCC BAA-2158]
          Length = 396

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 52/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   L   + +  + R      A        R 
Sbjct: 21  IAGHQGYVLIQTDNWNIETSVTGLAIILLLSLVIILAIEWLLRRLFRTGARTRGWFTGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
                K     L+ +A  +     K+              + YLL  + A        A+
Sbjct: 81  RRSARKQTNAALVKLAEGDYKQVEKL--LSRHADHAEQPMVNYLLAAEAAQQRGDETRAN 138

Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + L+          L +  TR               + ++A+    + L+I+P  P V  
Sbjct: 139 QHLDRASELNDNDSLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR--NRAILLIARSLENADKGDMIASYHD 248
              Q Y+  + W   +  L    K +     +R   +    +    +             
Sbjct: 192 LAEQAYMRTQAWGALLNILPAMEKIQLGDATHRLELQQQCWLGLMNQAMADQGSDGLKRW 251

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                +   N     +  A  LI  +    A+ I+ +  K +    +  +   L + N  
Sbjct: 252 WQNLSRKTRNETALQVAMADHLIVCDDHDTAQTIVLEGLKRHFDERLVLLMPRLKTGNPQ 311

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              K   +  + +  +      + ++ ++ G  + A      A++  P    +  LA   
Sbjct: 312 QLEKALRQQIKQHGATPLLHSTLGQLLMQHGEWELAGEAFRAALQQRPDAFDYAWLADTL 371

Query: 369 QANSHNTDKI 378
                  +  
Sbjct: 372 DRQHKPEEAA 381


>gi|116252907|ref|YP_768745.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257555|emb|CAK08652.1| conserved hypothetical TPR repeat receptor protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 1238

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 86/265 (32%), Gaps = 16/265 (6%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y A+     +    N   A  +     Q+    +  L  +   Q+A          E +E
Sbjct: 345 YGAIMQAYTAGFLENPRAAIDIIRKAEQR-YPDDPTLPAV-RAQLAQLTDDREQMKEAIE 402

Query: 145 MMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             L           A     +++    D++ A     +A+ ++P A     ++       
Sbjct: 403 RSLSLDPDHPMALSARAG--YKAIYESDIDGALADLNRAIALAPGASGTLNSLGLLQSSR 460

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
                A     Q  K A E +    +L    S+   D+G M  + H+   ++ L  +  +
Sbjct: 461 ----DANGEAEQAFKKAIELDPQDPLLRANLSILYLDQGRMKEAKHEIDTAIALDPSFDI 516

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---E 318
           A +   +  +   ++ +A   L      NP    + +           ++     L   +
Sbjct: 517 ALLARGRYYLQTGERDRALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNAD 576

Query: 319 EINKESVESLVIVSKIALEMGSIDQ 343
            ++K     ++   + A+++   D 
Sbjct: 577 RLDKNDP--VISAFRTAVDIDDYDA 599


>gi|224124556|ref|XP_002319361.1| predicted protein [Populus trichocarpa]
 gi|222857737|gb|EEE95284.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 56/301 (18%), Positives = 103/301 (34%), Gaps = 44/301 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + +   E L+ +L+      P      +     E    GD+ SA+    +A   
Sbjct: 450 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPSARAILQEAYAA 507

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK---- 239
            P++  +  A  +      E  RA   L + ++            ++ R L N ++    
Sbjct: 508 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERKL 567

Query: 240 -------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                                    G++  +       LK C + +   +  A      N
Sbjct: 568 LDEGLQRFPSFFKLWLMLGQLEERLGNLDKAKEIYEAGLKSCPSHVPLWLSLANLEEKTN 627

Query: 275 KKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332
              KA  +L    K NP +PE+      + +E+  G  K A  L     +E   S ++ +
Sbjct: 628 GLSKARAVLTMARKKNPKNPELWLA--AIRAESRHGNNKEADNLMAKALQECPTSGILWA 685

Query: 333 KIALEMGSIDQAHAKAMLAMKI-AP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             ++EM    Q  +K+  A+K  +P    +   +A++        DK   W   A+   P
Sbjct: 686 -ASIEMAPRAQHKSKSADAIKKCSPHDPHVTTAVAKLFWRERK-VDKARSWLNRAVTLAP 743

Query: 391 D 391
           D
Sbjct: 744 D 744


>gi|302037718|ref|YP_003798040.1| hypothetical protein NIDE2405 [Candidatus Nitrospira defluvii]
 gi|300605782|emb|CBK42115.1| conserved protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 805

 Score = 63.4 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 92/266 (34%), Gaps = 11/266 (4%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A +   A +  S V +Q+         +L+ +++L  R    A +    +L+       
Sbjct: 358 NAGHQAEADRRLSEVLRQN--PRSAQGLILQGKVSLIGRNGKDAVQAFRTVLRDQP-ELA 414

Query: 156 AVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            V  L  ++    G+   A+    +A  +SP  P    A+        +  RA T L   
Sbjct: 415 HVQHLLGQAYLMTGNSALARESFERATALSPGLPEPGLALAMMESQNGQTQRARTRLKDI 474

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K+  + +R    L+    L + +     ++     +        +MA     K   SQ 
Sbjct: 475 LKSYPD-HRQAMELMFDLDLADGNWNHAASTLSRLRQLEGESAALLMA---EGKLYKSQK 530

Query: 275 KKRKAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
              +A    E+   +      P +A ++  L ++      +R   +         +  ++
Sbjct: 531 DFTRAIAAYERAVTLEADAQDPLVAVVHLDLQNKQPERARRRLEAIITARPNHPYAHGLM 590

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
            ++   +G  D A A    A +I P 
Sbjct: 591 GEVLSLIGRQDSAMAHFREATRINPT 616



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 87/289 (30%), Gaps = 37/289 (12%)

Query: 105 KMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLY 161
           K      +        L ++  L  Q  L      +A E  E      P   E  +    
Sbjct: 397 KDAVQAFRTVLRDQPELAHVQHLLGQAYLMTGNSALARESFERATALSPGLPEPGLALAM 456

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------ 215
            ES   G    A+      L   PD     E +    +    W+ A + L++ +      
Sbjct: 457 MESQN-GQTQRARTRLKDILKSYPDHRQAMELMFDLDLADGNWNHAASTLSRLRQLEGES 515

Query: 216 -----------KNAKEWNR-----NRAILLIARSLENA--------DKGDMIASYHDAIE 251
                      K+ K++ R      RA+ L A + +                 +      
Sbjct: 516 AALLMAEGKLYKSQKDFTRAIAAYERAVTLEADAQDPLVAVVHLDLQNKQPERARRRLEA 575

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTV 308
            +    N   A     + L    ++  A     +  ++NP    P + +    +      
Sbjct: 576 IITARPNHPYAHGLMGEVLSLIGRQDSAMAHFREATRINPTWITPWLDSATLSISQGQAD 635

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             ++        N  S E  ++++ +    GS+D+A A     +++ PR
Sbjct: 636 SAIRTLQEGLAANPASEELNMLLASVLASQGSVDEAIAAYDAVLRMNPR 684



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 96/314 (30%), Gaps = 41/314 (13%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  AR       Q H  H + L  L    I           + L  M+    T     
Sbjct: 187 GRLQEARATLHRALQAHPHHLDLLRNLQT--ILDKAHDDKATEQVLRQMIHEEPTLYDPR 244

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     +    + A+    +AL + P+      A+     + +    A   L ++   
Sbjct: 245 LKLARFFDQRHATDQAEAVLREALTVFPENEQAWLALADFLNIRRGKDAARVAL-RQAAE 303

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              ++      L A    + D  +    Y    +        + A +  A+   +   + 
Sbjct: 304 QLPYSTQIPFALAALYESHKDLAEAKRVYETLAKDYDKKPAGLDAQVKIAQLDFNAGHQA 363

Query: 278 KAEVILEKIWKVNP--------------------------------HPEIANIY-----T 300
           +A+  L ++ + NP                                 PE+A++       
Sbjct: 364 EADRRLSEVLRQNPRSAQGLILQGKVSLIGRNGKDAVQAFRTVLRDQPELAHVQHLLGQA 423

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +L++ N+    +   R   ++    E  + ++ +  + G   +A  +    +K  P    
Sbjct: 424 YLMTGNSALARESFERATALSPGLPEPGLALAMMESQNGQTQRARTRLKDILKSYPDHRQ 483

Query: 361 FL-LLAQIEQANSH 373
            + L+  ++ A+ +
Sbjct: 484 AMELMFDLDLADGN 497



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 88/298 (29%), Gaps = 41/298 (13%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A ++    + +   ++  + + L   +  + +    A    E + +    +   + +
Sbjct: 290 GKDAARVALRQAAEQLPYSTQIPFALAA-LYESHKDLAEAKRVYETLAKDYDKKPAGLDA 348

Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
               +      G    A R  ++ L  +P +        +  ++ +    A+       +
Sbjct: 349 QVKIAQLDFNAGHQAEADRRLSEVLRQNPRSAQGLILQGKVSLIGRNGKDAVQAFRTVLR 408

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +  E    + +L  A  +     G+   +      +  L                     
Sbjct: 409 DQPELAHVQHLLGQAYLM----TGNSALARESFERATALSPGL----------------- 447

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
                         P P +A       +  T     R   + +   +  +++ ++  + L
Sbjct: 448 --------------PEPGLALAMMESQNGQTQRARTRLKDILKSYPDHRQAMELMFDLDL 493

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE-QANSHNTDKILYWTQSALHAMPDPL 393
             G+ + A +      ++   +   LL+A+ +   +  +  + +   + A+    D  
Sbjct: 494 ADGNWNHAASTLSRLRQLE-GESAALLMAEGKLYKSQKDFTRAIAAYERAVTLEADAQ 550



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 19/168 (11%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+ A  + +A   L    K         A      +     + +   +  +  + +++  
Sbjct: 47  YIQAGNFPKARVALRNVLKIDP----KDADAYFLVAQVEEKEKNWRNAVANYQQVIEIVP 102

Query: 258 NSIMASICAAKSLISQNKK----RKAEVILEKIWKVNPHPE----IANIYTHLLSENTVG 309
           +   A I  AK  +         R A+ +LEK      HP+     A     L  ++ + 
Sbjct: 103 DHKEALIVLAKYYLEAKLVDEVGRAADKVLEK------HPQDPQAQALKIAMLAQQDKMD 156

Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + + R   L +      +  ++++ +  +MG + +A A    A++  P
Sbjct: 157 RAIVRGEELIKQYPTEPDVAILLATLYGQMGRLQEARATLHRALQAHP 204


>gi|322514006|ref|ZP_08067080.1| porphoryin biosynthesis protein HemY [Actinobacillus ureae ATCC
           25976]
 gi|322120156|gb|EFX92117.1| porphoryin biosynthesis protein HemY [Actinobacillus ureae ATCC
           25976]
          Length = 417

 Score = 63.4 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 8/214 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++ + + +   ++     V I   +++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLLLVGLIAGPYIAGSQGYVRIETASKVIEMSLVMLVVFFVIVMAVVYTVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V   F       ++    R + K  +    GL+ ++  +   A K+ S  ++     +E 
Sbjct: 61  VVSRFCRLSKGSYNWFFNRKHKKAQQETLEGLIKMSEGDYSKAEKLFSKNAKHA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES--CRIGDLNSAQRYA 177
           ++ LL+  + A        A++ L    ++  T   AV  L       + G L +A+   
Sbjct: 118 VLNLLKAAEAAQQRGDDFSANKYLIEAGELAGTNNVAVE-LARAKILMQQGKLPAARSAI 176

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
              ++++P    V    +Q Y  +K ++ A+  +
Sbjct: 177 DSLIELAPRNTEVLRLAIQIYKDSKAYN-ALDTI 209


>gi|114319318|ref|YP_741001.1| TPR repeat-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225712|gb|ABI55511.1| Tetratricopeptide TPR_2 repeat protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 955

 Score = 63.4 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 12/333 (3%)

Query: 54  AWILLFAVSRFFLSCPAMLFHMLH--KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111
           AW LL    R      +         +     G   L   ++ +   +    R     + 
Sbjct: 228 AWSLLARYHRIMGDNESAEAAYGRAIEHRAAPGRDHLRRAMVRLDLGDREGTRADIEGLR 287

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
           Q  + H    +  LE  +AL    Y  A    E  L +  +   A+ +L     R+G   
Sbjct: 288 QGGSAH--PAIPYLEGMLALQNENYGDARRSFEEALAMDRSYSAALLALGQTLRRLGSDE 345

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A+ +  + +  SP +      ++  Y   + +  A+ FLN+    + ++  + A L   
Sbjct: 346 QAEHFLNRHVQESPGSLQGIRTLMALYAEQERFDDALQFLNRA---SLDYPGDAADLHEL 402

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288
           R       GD   S      ++    +        A +L+   +       L        
Sbjct: 403 RGRLMMLSGDPERSVQALRNAVAARPDETGLQELLAVALLRSGETEAGLDTLRAAGTQDV 462

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            +   +   +   L +      L+RA  L+    ++     +     + +G +++A    
Sbjct: 463 TSQQLDATMVLFLLQTGRYEEALERAELLQARQPDAASPHSLAGAALMGLGRVEEAREAF 522

Query: 349 MLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
              +++ P    + + LA +E   + + +    
Sbjct: 523 KKGLELEPDNLSVAMNLANLE-LQTGDREAGRQ 554



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 75/275 (27%), Gaps = 41/275 (14%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G  AL  GL  +    +  AR  H    Q+       +  LL  Q ALA+ +   A E  
Sbjct: 705 GRMALTRGL--VNQGRLADARP-HLDELQERYGDRPEVQALL-GQAALADDRLEPAIEHY 760

Query: 144 EMMLQIPATREFAVYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           +  L     +         E+    D    A     + L+  P+          + +   
Sbjct: 761 QQALADADPQPRPWVHALAEAQVAADRPGEALATLGRWLEAHPEDRGTWHLYASRQLALG 820

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + + A+    +          N   L +  +       D   +   A  +++L   S   
Sbjct: 821 DTAEALQAYERIL-----AQDNDDALALNNAAWLLRDRDTERALDYARRAVELVPESAQI 875

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
                  LI   +  +A   L +                                 E+  
Sbjct: 876 HDTLGVVLIHAGQPAEALETLTRA-------------------------------GELAP 904

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           ES      ++    E G  + A  +    ++  P 
Sbjct: 905 ESPTIQYHLAWAEREAGDTEAATRRLNRLLEAEPD 939



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 73/233 (31%), Gaps = 7/233 (3%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L     +   +   A E  +  L++         +L     + GD  + ++      +  
Sbjct: 504 LAGAALMGLGRVEEAREAFKKGLELEPDNLSVAMNLANLELQTGDREAGRQVLEGIQEAH 563

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P      + +    +  ++   A  +L +      E      +L    +    D+G   A
Sbjct: 564 PGHARSAQRLAMLSLQDQDTQGAAKWLQRAIDAQPESLPPHLML----ARIQEDEGRREA 619

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTH 301
           +    + + +   ++       A   +S N+  +A V L+   +  P     ++A     
Sbjct: 620 ALQTLLGAREHHGDNPELLYALADVQMSLNQTDEAVVSLQSAVERAPDNTGLQLALARAQ 679

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             +++  G       L E      E  + +++  +  G +  A        + 
Sbjct: 680 ARADDNEGAEATLEALLEQQPSHYEGRMALTRGLVNQGRLADARPHLDELQER 732



 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 5/136 (3%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L     LA      A +  E +L        A+ +  +   R  D   A  YA +A+++ 
Sbjct: 811 LYASRQLALGDTAEALQAYERILAQDNDDALALNNAAWL-LRDRDTERALDYARRAVELV 869

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P++  + + +    + A + + A+  L +  + A E    +  L  A      + GD  A
Sbjct: 870 PESAQIHDTLGVVLIHAGQPAEALETLTRAGELAPESPTIQYHLAWAE----REAGDTEA 925

Query: 245 SYHDAIESLKLCDNSI 260
           +       L+   +  
Sbjct: 926 ATRRLNRLLEAEPDFP 941


>gi|308051392|ref|YP_003914958.1| HemY domain protein [Ferrimonas balearica DSM 9799]
 gi|307633582|gb|ADN77884.1| HemY domain protein [Ferrimonas balearica DSM 9799]
          Length = 387

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 53/381 (13%), Positives = 111/381 (29%), Gaps = 9/381 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ Y  ++   + +   +      V I  G+    TS    + +L        LL  
Sbjct: 1   MIRILFYTLLVLAGLYAGPKLVANQGYVLIAVGDYTIETSVVKGVLMLLVLFGLLQLLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +           +    +  K    G +++A  +   A K  +            
Sbjct: 61  LVVKLIGLTGFTLSSPQRWRRKRSRKHTLQGALALAQEDWAAAEK--AMARGAQAGEYPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           + YL   + A            L    + P   +    +        G L  A++     
Sbjct: 119 INYLAAARAAHHGGDPEACERYLAEAQKQPGAEKAVQVTRLRYQLDDGQLAQARQGLEAL 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                  P V +  ++ Y   ++W      +    K+        A L     +    + 
Sbjct: 179 DAKLRQQPQVLKLALELYRRQQDWDALARLMPALSKHKVLTEAELAALPEEIEVVCLSQS 238

Query: 241 DMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEV-ILEKIWKVNPHPEIANI 298
               +     + L        + + A A  L            +L++  K  P P +  +
Sbjct: 239 PDREALEQRWQGLSRRLKRSESVLVAYANGLARFGDAAAGRKLVLDRFDKETPQPALLAV 298

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--IDQAHAKAMLAMKIAP 356
               LSE+    +     L+    +S    +     AL        +A      A++ AP
Sbjct: 299 -LPALSEDAAEAVSHI--LQRKYPDSDLLELKDCYAALAEQDRAWRRAKEWRQKAVEQAP 355

Query: 357 RKEIFLLLAQIEQANSHNTDK 377
             E +  LA++++        
Sbjct: 356 SAERYRALARVQEQLGEREGA 376


>gi|241738333|ref|XP_002414072.1| pre-mRNA splicing factor, putative [Ixodes scapularis]
 gi|215507926|gb|EEC17380.1| pre-mRNA splicing factor, putative [Ixodes scapularis]
          Length = 939

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 101/297 (34%), Gaps = 48/297 (16%)

Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           + +     LE +LQ      P      +          GD+ +A+   + A   +P++  
Sbjct: 583 KSSGTRSTLEALLQRAVAHCPKAEVLWLMG-AKSKWMAGDIPAARSILSLAFQANPNSEE 641

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD----------- 238
           +  A V+      E+ RA   L + + +A         + +  +L +             
Sbjct: 642 IWLAAVKLESENNEFERARRLLAKARSSAPTARVMMKSVRLEWALGDLRMASELLEEGLK 701

Query: 239 ------------------KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                             +G    +     + LK C  S+   +  ++   S     KA 
Sbjct: 702 LYADFPKLWMMKGQILQSQGQTDEARATYNQGLKKCPTSVPLWLLLSRLEESGGALTKAR 761

Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLK--RALRLEEINKESVESLVIVSKIALE 337
            +LEK    NP HPE+   +   +        K      + +  ++   S ++ S+ A+ 
Sbjct: 762 SVLEKARLRNPCHPEL---WLEAVRVEARAGFKEIALTLMAKAMQDCPGSGILWSE-AIF 817

Query: 338 MGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           M    Q   K++ A+K     P   + L ++++       T+K+  W    +   PD
Sbjct: 818 MEPRPQRKTKSVDALKRCEHDPY--VLLAVSKLFWTERK-TNKVREWLNRTVKIEPD 871



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 85/225 (37%), Gaps = 22/225 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+  A+       + +P+ P    A  +   +  +   A   +    K  +    +  I 
Sbjct: 288 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKIQTARNLI---MKGGEMCPNSEDIW 344

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L A  L+  D    + +     ++++   NS+   I A++    + + +  + +  K  +
Sbjct: 345 LEASRLQPTDLAKAVIA-----QAVRQIPNSVRLWIKASEL---EGELKAKKRVFRKALE 396

Query: 289 VNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
             P+   +      L   E+    L RA    E    SVE  + ++++     + D A  
Sbjct: 397 TIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVELWLALARL----ENYDNARK 449

Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               A +  P    I++  A++E+A ++N   +      A+ ++ 
Sbjct: 450 VLNKARENIPTDRQIWITAAKLEEA-NNNAHMVEKIIDRAITSLR 493


>gi|94309237|ref|YP_582447.1| hypothetical protein Rmet_0292 [Cupriavidus metallidurans CH34]
 gi|93353089|gb|ABF07178.1| Tetratricopeptide TPR_2 repeat protein [Cupriavidus metallidurans
           CH34]
          Length = 635

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 102/325 (31%), Gaps = 48/325 (14%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +         +   + L  +L  +I+L       ++     + +       A  +   
Sbjct: 77  AARAQRTPLPNVSLSPDILYRVLAAEISLQRGMAGASYRTYLDLARETRDPRLAQRATEI 136

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            +        A   A    +++P +P  ++ +    VL   W  A   L+++   A   +
Sbjct: 137 -AFNARSSQQALDGARLWSELAPKSPAASQVLATLLVLNGRWEEAEPLLSRQLATAPAAH 195

Query: 223 RNRAIL--------------------------------LIARSLENADKGDMIASYHDAI 250
           R  AIL                                 +A +      G+   +  +  
Sbjct: 196 RGDAILQLQQQMSRTSDPAGAVAVLQRLTANDSKLPETHLALARAQEIAGNSQGALTELD 255

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305
           E+L+L  N   A++ +A+         K+  ++++    +P     H  +A +Y      
Sbjct: 256 EALRLKPNLEAAALMSAEMQAESA-PDKSIAVMKRFLAKSPSSVNGHITLARLYLQQNDM 314

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE--- 359
           ++         L ++        + +   +L+  S D A       +++A   P      
Sbjct: 315 DSAR--AEFEVLRKVAPTDPRVPLALGLTSLQARSYDDAERYLKEYLQMAEKSPAANPDI 372

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384
            +  LAQI +    +    + W   
Sbjct: 373 AYQYLAQIAE-EKKDYPAAIDWLDR 396


>gi|319789142|ref|YP_004150775.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
 gi|317113644|gb|ADU96134.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
          Length = 583

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 14/193 (7%)

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               P A +     +        W +AI  L +      E      + L+  +   A   
Sbjct: 45  FKFKPTASYYYMLFLNYQA-GGNWQKAIEALEKA----AELEPRNTVYLVEAAKIAASHQ 99

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA 296
               +     E+LK   N   A    A  L+ + K  +AE +  K+  ++P  +    +A
Sbjct: 100 KFKEAERLIREALKRNPNDPDALKLYAGLLVVEGKLAEAENVYRKLISIHPDRDSFVFLA 159

Query: 297 NIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           N+       +  +  L+RA +L             + ++        +A      ++   
Sbjct: 160 NLLINRGEPDKALEVLQRARKLY---PNDYLVNYFLGQVYFLKKDYKRARLYLERSISAN 216

Query: 356 P-RKEIFLLLAQI 367
           P  +  FLLL+++
Sbjct: 217 PGFESAFLLLSKV 229



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 89/261 (34%), Gaps = 16/261 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L+      G+   A     KA ++ P          +     +++  A   + +  K   
Sbjct: 57  LFLNYQAGGNWQKAIEALEKAAELEPRNTVYLVEAAKIAASHQKFKEAERLIREALKRNP 116

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
               N    L   +     +G +  + +   + + +  +        A  LI++ +  KA
Sbjct: 117 ----NDPDALKLYAGLLVVEGKLAEAENVYRKLISIHPDRDSFVFL-ANLLINRGEPDKA 171

Query: 280 EVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             +L++  K+ P+  + N +      L  +    +L    R    N     + +++SK+ 
Sbjct: 172 LEVLQRARKLYPNDYLVNYFLGQVYFLKKDYKRARLY-LERSISANPGFESAFLLLSKVY 230

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWTQSALHAMPD-- 391
           + +     A       +K  P   I+ L  LA +  A     + +    +    +  D  
Sbjct: 231 MNLKDYPHAEKFLKEVLKKEPD-NIYALRELALLYLAEGKTKEAVNALNRLVSLSPYDLR 289

Query: 392 -PLWISDDGYLSSVWLPLSPI 411
              W++ + +    +  + P+
Sbjct: 290 LLSWVAANLFQLKEYRQVIPV 310



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 95/276 (34%), Gaps = 23/276 (8%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++ +      A ++     +++    + L   L   + + E +   A      ++ I   
Sbjct: 94  IAASHQKFKEAERLIREALKRNPNDPDALK--LYAGLLVVEGKLAEAENVYRKLISIHPD 151

Query: 153 R--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           R     + +L       G+ + A     +A  + P+   V   + Q Y L K++ RA  +
Sbjct: 152 RDSFVFLANLLI---NRGEPDKALEVLQRARKLYPNDYLVNYFLGQVYFLKKDYKRARLY 208

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L +       +        +  S    +  D   +     E LK   ++I A    A   
Sbjct: 209 LERSISANPGFES----AFLLLSKVYMNLKDYPHAEKFLKEVLKKEPDNIYALRELALLY 264

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINKES 324
           +++ K ++A   L ++  ++P+ ++      A     L     V  +    ++ ++N  +
Sbjct: 265 LAEGKTKEAVNALNRLVSLSPY-DLRLLSWVAANLFQLKEYRQVIPV--IEKIAKLNPGN 321

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMK---IAPR 357
                ++       G++ +A       +      P 
Sbjct: 322 PNVYFMLGLAYEMSGNLKKALEAYKKVLSFHIENPT 357



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 105/316 (33%), Gaps = 40/316 (12%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IP--ATREFAVYSLYFESCRI 167
             +  + N+YLV     Q+   ++ Y  A   LE  +   P   +    +  +Y     +
Sbjct: 177 RARKLYPNDYLVNYFLGQVYFLKKDYKRARLYLERSISANPGFESAFLLLSKVY---MNL 233

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--- 224
            D   A+++  + L   PD  +    +   Y+   +   A+  LN+   +   ++     
Sbjct: 234 KDYPHAEKFLKEVLKKEPDNIYALRELALLYLAEGKTKEAVNALNR-LVSLSPYDLRLLS 292

Query: 225 ------------RAILLIARSLENADKGDM------------IASYHDAIESLKLCDNS- 259
                       R ++ +   +   + G+               +   A+E+ K   +  
Sbjct: 293 WVAANLFQLKEYRQVIPVIEKIAKLNPGNPNVYFMLGLAYEMSGNLKKALEAYKKVLSFH 352

Query: 260 --IMASICA-AKSLISQNKKRKAEVILEKIWKV--NPHPEIANIYTHLLSENTVGKLKRA 314
                 +   A          +A+ + +K+W++  NP   I          +T G     
Sbjct: 353 IENPTVLERLAIVNYKLGNYERAKELYQKLWEITGNPAYLIRTALLEDKLGDTQGAYSLL 412

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
             L    K++ + L  ++ ++ ++G  D+        +K+ P  +    LA         
Sbjct: 413 KELGGNPKDNPDLLFYLAYLSEKLGRYDETENYLKELVKLKPTPDSLNYLAYFYAQRGKE 472

Query: 375 TDKILYWTQSALHAMP 390
            ++ L     AL   P
Sbjct: 473 LNRALELVNRALKEEP 488


>gi|86148164|ref|ZP_01066462.1| HemY protein [Vibrio sp. MED222]
 gi|85834011|gb|EAQ52171.1| HemY protein [Vibrio sp. MED222]
          Length = 393

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 3/157 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R I    V+   +      S     V I+  N+    S   ++  +   L A   L  
Sbjct: 1   MIRWIFLLLVLGAGLIVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIALLAALFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +    G++ +   +   A K  +  +  H      
Sbjct: 61  LFKKLMYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           L YL+  Q A  +   +   +K   +         AV
Sbjct: 119 LCYLVASQAAHEQGNTSE-RDKYIELASQQEDSLLAV 154


>gi|127511249|ref|YP_001092446.1| HemY domain-containing protein [Shewanella loihica PV-4]
 gi|126636544|gb|ABO22187.1| HemY domain protein [Shewanella loihica PV-4]
          Length = 388

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 61/396 (15%), Positives = 126/396 (31%), Gaps = 19/396 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW----I 56
           M+R + Y  ++ + + +   +S     + I  G+    TS    +     F        +
Sbjct: 1   MIRALIYLVIVIIGLIASPYLSWLKGYIYIAIGDYELETSLVFAIFAAVMFYVGLVLLEM 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           L+       L+   +      K         L  G +++A  +   A K  +        
Sbjct: 61  LVVWTINLVLNSRLLPEKWRRKAARK---HTLT-GALALAEEDWSTAEK--AMARGADKG 114

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L  L   + A     ++     L    + PA  +  + +      + G+L  A+  
Sbjct: 115 EIPALNLLAAARAAQHRNDHDARDHYLNEAAKDPAAYKAVLTTRVRYLLQQGELTRARAL 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +    S   P V    +  Y   ++WS     L   KK           L    +LE 
Sbjct: 175 LDELNPTSKSKPPVLALALDLYRAQQDWSALKLLLPIVKKRGIIDESEHQALNAEVNLEL 234

Query: 237 A--DKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                G    +   A      + +     I      A  L    ++ +A  +L K  K  
Sbjct: 235 LKQAAGQNEQALEKAWHWLSRAERKQTEFI---AQYALGLAKFERRDEAIKLLMKQAKQQ 291

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P   I +    +L+   +   K+   LE+   E  E    ++ +  +     ++      
Sbjct: 292 PTQAIFDALPQVLTPADLDARKQLFELEKKLGEQTEYQACIAALYDQSKEFRESQKWWAK 351

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
             + +P K+ +L LA+  +        +  + ++A+
Sbjct: 352 VCQQSPTKQRWLALAEACEHLGEQNQALQNYRKAAI 387


>gi|182677437|ref|YP_001831583.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633320|gb|ACB94094.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 1085

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 81/235 (34%), Gaps = 35/235 (14%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +L+         + + A +  + +L         ++ L   + + GDL++A  +  KA+ 
Sbjct: 47  FLMTALDYHRAGRLDQAADLYQRILLAEPDHFLCLHHLGLIAHQKGDLDTAIAWIEKAIR 106

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + PD       +   Y      ++A+        + ++     A   +  +LE  D+G+ 
Sbjct: 107 VKPDYAEALANLAALYRAKGLLTQAVETGRTAVLHGQD--HVPAHCNLGGALE--DQGEW 162

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
            A+      ++ +    I  ++ AA  L   ++  +A                       
Sbjct: 163 EAALACYRRAVAINPAFIEGAMNAANVLRRLHRHEEA----------------------- 199

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                   L+    L     ++ E  +++  I  ++G  D A A    A+ + P 
Sbjct: 200 --------LQTCEALIACRPDAAEPHMVLGNILRDLGQFDAALAAYEQALALRPD 246


>gi|15600450|ref|NP_253944.1| hypothetical protein PA5257 [Pseudomonas aeruginosa PAO1]
 gi|107104359|ref|ZP_01368277.1| hypothetical protein PaerPA_01005434 [Pseudomonas aeruginosa PACS2]
 gi|116053405|ref|YP_793730.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218894359|ref|YP_002443229.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa
           LESB58]
 gi|254238046|ref|ZP_04931369.1| hypothetical protein PACG_04161 [Pseudomonas aeruginosa C3719]
 gi|254243859|ref|ZP_04937181.1| hypothetical protein PA2G_04687 [Pseudomonas aeruginosa 2192]
 gi|313110330|ref|ZP_07796220.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa 39016]
 gi|9951568|gb|AAG08642.1|AE004938_4 hypothetical protein PA5257 [Pseudomonas aeruginosa PAO1]
 gi|115588626|gb|ABJ14641.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126169977|gb|EAZ55488.1| hypothetical protein PACG_04161 [Pseudomonas aeruginosa C3719]
 gi|126197237|gb|EAZ61300.1| hypothetical protein PA2G_04687 [Pseudomonas aeruginosa 2192]
 gi|218774588|emb|CAW30405.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa
           LESB58]
 gi|310882722|gb|EFQ41316.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa 39016]
          Length = 412

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 128/376 (34%), Gaps = 29/376 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           +S     V I + +  Y +S +  L++L       +L+  V R   S   ++        
Sbjct: 22  ISEQAGYVLIAYKSFRYESSLWSFLALLAVVWLLVVLVRLVLRLLGSSGRVVNPWSRYNR 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIA 139
             +   A ++GL  +   N P A +     ++        L++ L   + A    +Y+ A
Sbjct: 82  RRRVQMAEHSGLRDLGEGNWPQALRHLRRAAE---MGERPLMHYLGAARAANELERYDEA 138

Query: 140 HEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            + L    +     +  +  L         GD   A+    +   + P    V   + Q 
Sbjct: 139 DDLLNRAREREPDAQL-LVGLTRAQLLINRGDYPQARNTLEELHGLQPQHRTVLRLMQQL 197

Query: 198 YVLAKEWSRAITFL------NQKKKNA--KEWNRNRAILLIARSLEN-ADKGDMIASY-- 246
           YV   +W +A+  L       +  K++  ++  R   +  +  + E   ++G+       
Sbjct: 198 YVTQHDW-QALCVLLPELRKERVLKDSELRDLERRAWVASLQEAGERGLNEGETALQPLT 256

Query: 247 ---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
               +   +L+     +      A  L+    + +AE +L    K      +  +Y  + 
Sbjct: 257 QRWQNVPSALRADPAIV---AGYAAQLLRLGAEEEAEEVLRHALKQGFDATLVQLYGQVR 313

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-- 361
             +   +L+ A    + +      L+ + ++ L      +A      ++      E    
Sbjct: 314 GRDPGKQLQAAEGWLKEHPNDPGLLLTLGRLCLINKLWGKAREYLEASLSFQRSAETCAE 373

Query: 362 --LLLAQIEQANSHNT 375
              LLAQ+ +    N 
Sbjct: 374 LGRLLAQLGEVERSNQ 389


>gi|84393567|ref|ZP_00992321.1| HemY protein [Vibrio splendidus 12B01]
 gi|84375846|gb|EAP92739.1| HemY protein [Vibrio splendidus 12B01]
          Length = 393

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 3/157 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R I  F V+   +      S     V I+  N+    S   ++  +   L A   L  
Sbjct: 1   MIRWIFLFLVLGAGLVVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIALLAALFGLEY 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + +  +   +  ++    R   +  +    G++ +   +   A +  +  +  H      
Sbjct: 61  LFKKLMYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAERKVTRWANHH--DMPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           L YL+  Q A  +   +   +K   +         AV
Sbjct: 119 LCYLVASQAAHEQGNTSE-RDKYIELASQQEDSLLAV 154


>gi|296392116|ref|ZP_06881591.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa PAb1]
          Length = 412

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 59/376 (15%), Positives = 128/376 (34%), Gaps = 29/376 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           +S     V I + +  Y +S +  L++L       +L+  V R   S   ++        
Sbjct: 22  ISEQAGYVLIAYKSFRYESSLWSFLALLAVVWLLVVLVRLVLRLLGSSGRVVNPWSRYNR 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIA 139
             +   A ++GL  +   N P A +     ++        L++ L   + A    +Y+ A
Sbjct: 82  RRRVQMAEHSGLRDLGEGNWPQALRHLRRAAE---MGERPLMHYLGAARAANELERYDEA 138

Query: 140 HEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            + L    +     +  +  L         GD   A+    +   + P    V   + Q 
Sbjct: 139 DDLLNRAREREPDAQL-LVGLTRAQLLINRGDYPQARNTLEELHGLQPQHRTVLRLMQQL 197

Query: 198 YVLAKEWSRAITFL------NQKKKNA--KEWNRNRAILLIARSLEN-ADKGDMIASY-- 246
           YV   +W +A+  L       +  K++  ++  R   +  +  + E   ++G+       
Sbjct: 198 YVTQHDW-QALCVLLPELRKERVLKDSELRDLERRAWVASLQEAGERGLNEGETALQPLT 256

Query: 247 ---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
               +   +L+     +      A  L+    + +AE IL    K      +  +Y  + 
Sbjct: 257 QRWQNVPSALRADPAIV---AGYAAQLLRLGAEEEAEEILRHALKQGFDATLVQLYGQVR 313

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-- 361
             +   +L+ A    + +      L+ + ++ L      +A      ++      E    
Sbjct: 314 GRDPGKQLQAAEGWLKEHPNDPGLLLTLGRLCLINKLWGKAREYLEASLSFQRSAETCAE 373

Query: 362 --LLLAQIEQANSHNT 375
              LLAQ+ +    N 
Sbjct: 374 LGRLLAQLGEVERSNQ 389


>gi|91226890|ref|ZP_01261487.1| putative heat shock protein [Vibrio alginolyticus 12G01]
 gi|269966530|ref|ZP_06180613.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91188853|gb|EAS75138.1| putative heat shock protein [Vibrio alginolyticus 12G01]
 gi|269828874|gb|EEZ83125.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 391

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 110/343 (32%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E +++ P     
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                Y E+                           + +V  Y   +EW +AI + NQ  
Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIYYANQLA 168

Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K   + +R RA +       ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KLGNKRSRMRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLE 228

Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
                   +    +LE  K +  +  P IA  Y HL  E+ + +  RA  +++    S E
Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
             ++++++     ++  A       +   P  + F  L    I +A      +       
Sbjct: 288 --LMLAQLVAHHENVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|238790398|ref|ZP_04634169.1| hypothetical protein yfred0001_2660 [Yersinia frederiksenii ATCC
           33641]
 gi|238721505|gb|EEQ13174.1| hypothetical protein yfred0001_2660 [Yersinia frederiksenii ATCC
           33641]
          Length = 389

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  Y    +W+ AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLIIYQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAASADKQCARVSIMQGRLYLAKGEYAKGVEALERVLEQDKEIVSEALPMLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPEAWTNF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|156401113|ref|XP_001639136.1| predicted protein [Nematostella vectensis]
 gi|156226262|gb|EDO47073.1| predicted protein [Nematostella vectensis]
          Length = 993

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 105/284 (36%), Gaps = 25/284 (8%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEVQIALAERQYNI 138
           GY  L   L++  A ++  A  +H+Y +      +       L  LL+        +   
Sbjct: 121 GYINLAAALVA--AGDLEGA--VHAYATALQYNPDLYCVRSDLGNLLKA-----LGRLEE 171

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A       ++   +   A  +L       G++  A  +  KA+ + P+       +    
Sbjct: 172 AKACYLKAIETQPSFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVL 231

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             A+ + RA+    +    +     N A++    +    ++G +  +      +++L  N
Sbjct: 232 KEARIFDRAVAAYLRALNLSP----NHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPN 287

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317
              A    A +L  Q K  +AE       +++P H +  N   ++  E   GK++ ++RL
Sbjct: 288 FPDAYCNLANALKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKRE--QGKIEESIRL 345

Query: 318 EEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                    E   +   ++ +  + G + +A      A++I P 
Sbjct: 346 YCKALEIFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIHPT 389



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   Q    H + L  L    I   + +   +     + +   P     A
Sbjct: 303 GKVSEAEECYNTALQLSPTHADSLNNL--ANIKREQGKIEESIRLYCKALEIFPEF-AAA 359

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I P        +       ++   AI   ++  +
Sbjct: 360 HSNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQGAIQCYSRAIQ 419

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 420 INPAF----ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPSFPDAYCNLAHCL 469



 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+   +   N  +V+     +   +   ++A +     +++      A  +L   
Sbjct: 239 RAVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPNFPDAYCNLANA 298

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G ++ A+     AL +SP        +        +   +I    +  +   E+  
Sbjct: 299 LKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKREQGKIEESIRLYCKALEIFPEF-- 356

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  +     E++++      A       L      + A    
Sbjct: 357 --AAAHSNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQGAIQCY 414

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  ++NP     H  +A++  H  S N    ++      ++     ++   ++
Sbjct: 415 SRAIQINPAFADAHSNLASV--HKDSGNIPEAIQSYRTALKLKPSFPDAYCNLA 466


>gi|327191083|gb|EGE58135.1| putative exported protein, TonB-dependent receptor [Rhizobium etli
           CNPAF512]
          Length = 1226

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 83/263 (31%), Gaps = 18/263 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +A  TG +       P A       ++Q    +  L  +   Q+A          E +E 
Sbjct: 338 QAYTTGFL-----ENPRAALEIIKKAEQRYPDDPTLPAV-RAQLAQLTDDREQMKEAIER 391

Query: 146 MLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            L   P      +  + Y  +    D+  A     +A++++P       ++         
Sbjct: 392 SLALDPDHPMALSARAEYKAAY-ESDIGGALADLNRAIELAPGDSGSLNSLGLLQSSR-- 448

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A        K A E +    IL    ++   D+     +  +   ++ L  +  +A 
Sbjct: 449 --DANGEAETAFKKAIELDPQNPILHANLAMLYLDQSRTKEAKREIDTAIALDPSFDIAL 506

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEI 320
           +   +  +   ++ KA   L      NP    + +           +L     L   + +
Sbjct: 507 LVRGRYYLQIGERDKALEDLLAASTANPAHSQSQLMLAAAHYEKGDRLPAEQALDNADRL 566

Query: 321 NKESVESLVIVSKIALEMGSIDQ 343
           +K     ++   + A+++   D 
Sbjct: 567 DKNDP--VISAFRTAVDIDDYDA 587



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 107/331 (32%), Gaps = 44/331 (13%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPAT 152
           S        A  + +   ++ T   +  V LL+  IA +E++Y  A +   + +  +  T
Sbjct: 242 SAFDGRQAAAATLQNIRGRKLTVAQQARVDLLDATIAGSEKRYGDAAKLFQKALPHLDPT 301

Query: 153 R--------------------------EFAVYSLYFESCRIG---DLNSAQRYATKALDI 183
           R                              Y    ++   G   +  +A     KA   
Sbjct: 302 RRNMAQYGGYFARSLADPAHSEPPPATTTGPYGAIMQAYTTGFLENPRAALEIIKKAEQR 361

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDM 242
            PD P     +        + +     + +  + +   + +  + L AR+   A  + D+
Sbjct: 362 YPDDP----TLPAVRAQLAQLTDDREQMKEAIERSLALDPDHPMALSARAEYKAAYESDI 417

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIAN 297
             +  D   +++L      +         S++   +AE   +K  +++P     H  +A 
Sbjct: 418 GGALADLNRAIELAPGDSGSLNSLGLLQSSRDANGEAETAFKKAIELDPQNPILHANLAM 477

Query: 298 IYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +Y     ++   + KR       ++     +L++  +  L++G  D+A    + A    P
Sbjct: 478 LYLD---QSRTKEAKREIDTAIALDPSFDIALLVRGRYYLQIGERDKALEDLLAASTANP 534

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
                 L+         +         +A  
Sbjct: 535 AHSQSQLMLAAAHYEKGDRLPAEQALDNADR 565


>gi|213586160|ref|ZP_03367986.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 283

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 17/235 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
              Q Y+    WS  +  +    K       +RA+L     +   D+        
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSE 247


>gi|107023360|ref|YP_621687.1| HemY-like [Burkholderia cenocepacia AU 1054]
 gi|116690443|ref|YP_836066.1| HemY domain-containing protein [Burkholderia cenocepacia HI2424]
 gi|170733763|ref|YP_001765710.1| HemY domain-containing protein [Burkholderia cenocepacia MC0-3]
 gi|105893549|gb|ABF76714.1| HemY-like protein [Burkholderia cenocepacia AU 1054]
 gi|116648532|gb|ABK09173.1| HemY domain protein [Burkholderia cenocepacia HI2424]
 gi|169817005|gb|ACA91588.1| HemY domain protein [Burkholderia cenocepacia MC0-3]
          Length = 395

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 124/393 (31%), Gaps = 13/393 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K            N  
Sbjct: 63  IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDA--NLG 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+    A    +Y    +     +  P  ++  + +         D + A       
Sbjct: 121 AASLVGATAAHRMHEYTR-RDDWLSKVDAPEWQDARLLAAADMRADARDADGALAALADM 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--- 237
                      +  ++     K W+  +  L +  +  +  +   A+ L  ++ EN    
Sbjct: 180 QAGGKRIH-AQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLRE 237

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            + D  A          +   S   +  AA+ L+   ++ +A  I+E     N    +  
Sbjct: 238 RRHDPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLR 297

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y      + +  +++A   ++ + E  + L  + ++  +     +A +    A+K+A  
Sbjct: 298 RYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADN 357

Query: 358 K----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +         LA++ +          ++ +SAL
Sbjct: 358 EALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|90406698|ref|ZP_01214891.1| HemY protein [Psychromonas sp. CNPT3]
 gi|90312151|gb|EAS40243.1| HemY protein [Psychromonas sp. CNPT3]
          Length = 394

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 85/220 (38%), Gaps = 6/220 (2%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRL-YRTSPFVILSILYFFLFAWILLF 59
           MLR++    ++ L +     +S     + I++     Y  +      +++ F F  + L 
Sbjct: 1   MLRIMIIIGILLLGLLLGPEISANKGYLLISFDRYTTYEMTLINASLLVFLFYFVLLFLE 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            + R  L+  ++       R  +K  K    G++++   N   A+K+ +  + +    + 
Sbjct: 61  WMIRRLLALSSLTSGWFGVRKTNKAKKNSLLGMLALFEGNTKQAQKLLAKSAAR--SESP 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYA 177
            L Y+   + A  E +Y +  E  +  L         +  L +   +I      +A    
Sbjct: 119 ALTYIAAARAAQLENKYELRDEYFQEALSSQKECHLGI-GLVWVELQIEAHQYENALATL 177

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +  +  P+   +    +  Y   +EW R +  LN+ +KN
Sbjct: 178 RELDNNFPNNKKIVTLYLGIYPALEEWKRYLDILNKHRKN 217


>gi|327272197|ref|XP_003220872.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
           repeat-containing protein 1-like [Anolis carolinensis]
          Length = 1054

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 91/268 (33%), Gaps = 15/268 (5%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A E  +  LQ+      A+++L       G    A      ++   P+     
Sbjct: 700 LTKDLAEAKEYYKRALQLNPQHNRALFNLGNLLKSQGKKGEAVLLLRDSIRYGPEFADAY 759

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       ++   A        +N  + +     L     +   D G    +     +
Sbjct: 760 SSLASLLAEQEQLKEAEEVYQAGIENCPDSSD----LHNNYGVFLVDTGSPETAVSHYQK 815

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSEN 306
           +++L  N  +A +   +   S  + ++AE+  ++  KV   PEI     A  Y     E+
Sbjct: 816 AIQLSPNHHVAMVNLGRLYRSLGQNKEAEMWYKRALKVTRKPEILTPLGALYYNTGRYED 875

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML-AMKIAPRKEIFLLLA 365
               LK       +   + E+ + ++++   MG   +A         + A   E + LL+
Sbjct: 876 A---LKVYREAAVLQPSNKETRLALAQVLAMMGQTKEAEQMTSHIVTEEAECLECYRLLS 932

Query: 366 QIEQANSHNTDKILYWTQSALH-AMPDP 392
            I      N +K L     AL     DP
Sbjct: 933 AIYSKQ-ENYNKALEAIDKALQLKPKDP 959


>gi|196234038|ref|ZP_03132873.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196221887|gb|EDY16422.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 733

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 76/249 (30%), Gaps = 15/249 (6%)

Query: 117 HNEYLVYLLEVQIALA----ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
            +  L  + E            +   A      +L +      A++ L   + ++G   +
Sbjct: 2   PSPPLRTVPEAFALALQLHQAGRLAEAETLYRQILAVEPNHANALHFLGVVAHQVGQQET 61

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     +A+ + P        +   Y        AI    +      E N   A++    
Sbjct: 62  AIDLIRRAIALDPANAVAHSNLGYAYHAQGRTEEAIAEFRRAL----ELNPGDALVYYNL 117

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
                +      +     ++L+   N   A    A +L +  +  +A     + W++ P 
Sbjct: 118 GNALGECSRRDEAIAAYEQALRYRPNYPAACFNLANTLRNHGRLDRAIAAYRQAWRLVPG 177

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                  + N        +    + R   L ++  +S  +   +       G +D+A   
Sbjct: 178 DADVAINLGNALVEQREFSEATAVLR-HAL-QLRPDSAIAHYNLGNALRAQGLLDEAMLA 235

Query: 348 AMLAMKIAP 356
              A+++ P
Sbjct: 236 FRRALEMDP 244



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 87/275 (31%), Gaps = 21/275 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+++        A  +          +      L       A+ +   A  +    L++ 
Sbjct: 50  GVVAHQVGQQETAIDLIRRAIALDPANAVAHSNL--GYAYHAQGRTEEAIAEFRRALELN 107

Query: 151 ATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                  Y+L     E  R  +  +A     +AL   P+ P     +           RA
Sbjct: 108 PGDALVYYNLGNALGECSRRDEAIAAY---EQALRYRPNYPAACFNLANTLRNHGRLDRA 164

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I    Q  +         A + I       ++ +   +      +L+L  +S +A     
Sbjct: 165 IAAYRQAWRLVP----GDADVAINLGNALVEQREFSEATAVLRHALQLRPDSAIAHYNLG 220

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEIN 321
            +L +Q    +A +   +  +++PH  ++  + +L        +           L    
Sbjct: 221 NALRAQGLLDEAMLAFRRALEMDPH--LSEAWHNLGNAFRDRGQFDEAIASYQQALAS-K 277

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +   ++V +     + G +D+A      A+++ P
Sbjct: 278 CDYAAAIVSLGNACKDQGRLDEAMNAFRRALQLQP 312


>gi|161524050|ref|YP_001579062.1| HemY domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|189351189|ref|YP_001946817.1| HemY protein [Burkholderia multivorans ATCC 17616]
 gi|221199355|ref|ZP_03572399.1| putative hemY protein [Burkholderia multivorans CGD2M]
 gi|221205743|ref|ZP_03578758.1| putative hemY protein [Burkholderia multivorans CGD2]
 gi|160341479|gb|ABX14565.1| HemY domain protein [Burkholderia multivorans ATCC 17616]
 gi|189335211|dbj|BAG44281.1| HemY protein [Burkholderia multivorans ATCC 17616]
 gi|221174581|gb|EEE07013.1| putative hemY protein [Burkholderia multivorans CGD2]
 gi|221180640|gb|EEE13043.1| putative hemY protein [Burkholderia multivorans CGD2M]
          Length = 395

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 131/398 (32%), Gaps = 23/398 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S  + +  +         L  
Sbjct: 3   LRGIVWLAVLFAIAVALATVGRFDAGQVLIVYPPYRVDVSLNLFVISVVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARTRNEKAQASLRDAIANLYAGRFSRAEKAAREALAVDANQGAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            +       A A  + +    + E + ++ A        L     R    ++    A  A
Sbjct: 123 SLV-----AATAAHRMHEYTRRDEWLSKVDAPEWQDARLLATADMRADARDADGALAALA 177

Query: 181 LDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
              +        +  ++     K W+  +  L +  +  +  +   A+ L  ++ EN  +
Sbjct: 178 DLQAGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLR 236

Query: 240 GDMIASYHDAIESLKLCDNSIMA-------SICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                  HDA   L++  +   A       +  AA+ L++  ++ +A  I+E     N  
Sbjct: 237 ----ERRHDADALLEIWQSLSPAERQSPRLADLAAELLVALERRTEARRIVEDALAHNWD 292

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   Y      + +  +++A   ++ + E  + L  + ++  +     +A +    A+
Sbjct: 293 ARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLEAAL 352

Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           K+A  +         LA++ +          ++ +SAL
Sbjct: 353 KLADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|262274458|ref|ZP_06052269.1| putative N-acetylglucosaminyl transferase [Grimontia hollisae CIP
           101886]
 gi|262221021|gb|EEY72335.1| putative N-acetylglucosaminyl transferase [Grimontia hollisae CIP
           101886]
          Length = 272

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 90/256 (35%), Gaps = 45/256 (17%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           +    ++ A +    +++ P  +EFA+                                 
Sbjct: 1   MVAGFFDRAEKIFHQLIEEPDYKEFAL--------------------------------- 27

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDA 249
            + ++  Y   +EW +AI    +  K+ K +  R+ +      +++     D   +    
Sbjct: 28  -QQLLAIYQQTREWDKAIDIATKLVKSGKSKLKRDISHFYCELAMQAMGDSDEKGARQLL 86

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHLL 303
            ++L    + + AS+  A+  I+  + + A  +LE++ + +P       P +   Y  + 
Sbjct: 87  KKALATDKSCVRASLMLARLDIASEEYKDATKVLEQVLEQDPDFVSEALPLLEQCYNQMN 146

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            E  + +  R   +E+    S E  ++++ I  +  +   A +     +   P  + F  
Sbjct: 147 KEMALIRFLR-NCIEKNAGASAE--LMMADIISDHENPAMAQSFLTRQLTKNPTMKGFHK 203

Query: 364 LAQIEQANSHNTDKIL 379
           L ++         +  
Sbjct: 204 LMELHVGQ-AEEGRAK 218


>gi|82703800|ref|YP_413366.1| HemY-like [Nitrosospira multiformis ATCC 25196]
 gi|82411865|gb|ABB75974.1| HemY-like protein [Nitrosospira multiformis ATCC 25196]
          Length = 404

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 125/398 (31%), Gaps = 41/398 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   +    +  + +   I  ++    V I         S  +++ +L   +    L   
Sbjct: 1   MKGALWLLALFMIAVAVTIAATYNSGYVLIVAQPYRIELSLNLLVLLLLAIILMGYLGMR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +  F    PA L     +R  +K  +    GL +        A K  + V +        
Sbjct: 61  LIAFTARLPAELSEFRTRRRREKALEGTLEGLKAFFERRYAKAEKSAATVLKMEDSTAFS 120

Query: 121 LVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            +  ++  + A   R Y+   ++     +  A +E A+  L  ++  + D         +
Sbjct: 121 AINAIVAARAAHGLRNYSR-RDEFIAQAETSAPQEVALR-LMTQAELLLDE----HRPEE 174

Query: 180 ALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWN-----RNR 225
           AL +            P   +  ++       W+  +  L Q ++ +  E +     R R
Sbjct: 175 ALRLLHHLPPGELRRHPGALKLELEAQQNVGNWNAVLELLGQLEQHDGPEASLVKQLRGR 234

Query: 226 AILLIARS--------LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A +   RS         E  +           + +      S          ++ Q+   
Sbjct: 235 AHIENLRSRMLNPQALKEYWESLSPSEKKDGKVAAAAARAFSATGDCAMVHHIVEQS--- 291

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
                LE  W      E+A +Y      + + +++RA    E +      L+ + K+ + 
Sbjct: 292 -----LETQWDS----ELARLYAECAGSDPLRQIERAEAWLERHSSDASLLLALGKLCVN 342

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
                +A +    ++ + P     L L Q+ +      
Sbjct: 343 GELWGKAQSYLEASLSVKPGYAAHLALGQLNEKLGQPE 380


>gi|115374609|ref|ZP_01461888.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310819958|ref|YP_003952316.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368375|gb|EAU67331.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309393030|gb|ADO70489.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 442

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 86/225 (38%), Gaps = 7/225 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +++ A   LE +L+   + + A  +L     R G L+ A++   KAL++ PD     + 
Sbjct: 86  GEWDAAERGLEALLKTNPSLDPAWTNLGVIRERRGRLDQAEQAYRKALELKPDQEAAWDY 145

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + + Y      +     L QK +  +E    RA L    +     +  + A+  +A  +L
Sbjct: 146 LARLYCRTGRATNIEAELRQKLETRQEAISLRAAL----AFVLLHQQKLDAAATEAKRAL 201

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK--- 310
           K+ +  + A    A+    + K   A ++LE    + P     +    ++      +   
Sbjct: 202 KVDERYVKAMQVLAQVYFLEKKYELARMVLENALAIAPRDAATHNAMGVVQLTLQERYLA 261

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           L    R  ++  +  E+      +  E      A  +   A+K A
Sbjct: 262 LSSFKRAVQLRPDFAEARNNYGALLNEAQDYPAAVTELEAAVKSA 306



 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 16/223 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A NI    +      Q+       L ++L  Q  L       A E    +         A
Sbjct: 156 ATNIEAELRQKLETRQEAISLRAALAFVLLHQQKLDA----AATEAKRALKVDER-YVKA 210

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L            A+     AL I+P       A+    +  +E   A++   +  +
Sbjct: 211 MQVLAQVYFLEKKYELARMVLENALAIAPRDAATHNAMGVVQLTLQERYLALSSFKRAVQ 270

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              ++   R            +  D  A+  +   ++K   + + A +    +     + 
Sbjct: 271 LRPDFAEAR----NNYGALLNEAQDYPAAVTELEAAVKSASDFVPARLNLGNAYRGLGQF 326

Query: 277 RKAEVILEKIWKVNPHPE-----IANIYTHLLSE--NTVGKLK 312
            +A+   E++ K+ P        +A +Y  L  E  +T+ + K
Sbjct: 327 ARAKAEYEQVLKLQPSLADALFNLAILYLDLEPEGLDTLERFK 369


>gi|254247512|ref|ZP_04940833.1| hypothetical protein BCPG_02312 [Burkholderia cenocepacia PC184]
 gi|124872288|gb|EAY64004.1| hypothetical protein BCPG_02312 [Burkholderia cenocepacia PC184]
          Length = 395

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 124/393 (31%), Gaps = 13/393 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K            N  
Sbjct: 63  IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDA--NLG 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+    A    +Y    +     +  P  ++  + +         D + A       
Sbjct: 121 AASLVGATAAHRMHEYAR-RDDWLSKVDAPEWQDARLLAAADMRADARDADGALAALADM 179

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--- 237
                      +  ++     K W+  +  L +  +  +  +   A+ L  ++ EN    
Sbjct: 180 QAGGKRIH-AQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLRE 237

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            + D  A          +   S   +  AA+ L+   ++ +A  I+E     N    +  
Sbjct: 238 RRHDPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLR 297

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y      + +  +++A   ++ + E  + L  + ++  +     +A +    A+K+A  
Sbjct: 298 RYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADN 357

Query: 358 K----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +         LA++ +          ++ +SAL
Sbjct: 358 EALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|114777735|ref|ZP_01452695.1| hypothetical protein SPV1_08706 [Mariprofundus ferrooxydans PV-1]
 gi|114551951|gb|EAU54485.1| hypothetical protein SPV1_08706 [Mariprofundus ferrooxydans PV-1]
          Length = 560

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 87/239 (36%), Gaps = 21/239 (8%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +    +   V      + + G+  + +    +   + PD P +        +   +   
Sbjct: 11  RKRKIEQLLGVAG---RALQQGETEACESACGQLEALYPDHPDLLHLRGLLALQQGDVDA 67

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            +  L Q    A      RA LL +        GD  A+     ++L L    I   +  
Sbjct: 68  GLLQLKQAVAAAPT----RADLLASLGNGWFQAGDTQAAMECYRQALALDATDIATHLGM 123

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT--------HLLSENTVGKLKRALRLE 318
           A +L++Q +  +A V+LE+  K  P     +           H L+  +  +      + 
Sbjct: 124 AGALMAQGELTEARVMLERARKRKP----GDAMVRMGLFQVCHALNLYSEAR-THLEAIL 178

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTD 376
             +    E+   +  +ALE G++++       A++  P   + +L+LA + +  + + +
Sbjct: 179 ARDAGHAEAHYGLGVLALEQGALEEVREHIHHALQANPYHADAWLVLADLRRFEAEDDE 237



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 3/159 (1%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A   +  AR M     ++     + +V +   Q+  A   Y+ A   LE +L   A   
Sbjct: 128 MAQGELTEARVMLERARKRK--PGDAMVRMGLFQVCHALNLYSEARTHLEAILARDAGHA 185

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A Y L   +   G L   + +   AL  +P        +        E       + Q 
Sbjct: 186 EAHYGLGVLALEQGALEEVREHIHHALQANPYHADAWLVLADLRRFEAE-DDETQAMQQV 244

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            ++    +  R  L  A +    D GD  A++    E+ 
Sbjct: 245 YQHCPPGSDARMKLAFALAKVRDDLGDYAAAFELLQEAN 283



 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 70/250 (28%), Gaps = 33/250 (13%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
                 A E     L + AT       +       G+L  A+    +A    P    V  
Sbjct: 96  AGDTQAAMECYRQALALDATDIATHLGMAGALMAQGELTEARVMLERARKRKPGDAMVRM 155

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + Q       +S A T L          +   A       +   ++G +         +
Sbjct: 156 GLFQVCHALNLYSEARTHLEAILAR----DAGHAEAHYGLGVLALEQGALEEVREHIHHA 211

Query: 253 LKLCDNSIMASICAAKSLI--SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           L+       A +  A      +++ + +A                  +Y H    +   +
Sbjct: 212 LQANPYHADAWLVLADLRRFEAEDDETQAMQ---------------QVYQHCPPGSDA-R 255

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
           +K A  L ++  +     +     A E+     A   A  A            +A + + 
Sbjct: 256 MKLAFALAKVRDD-----LGDYAAAFELLQEANAIRHADNAFDTD------AAVAALAEI 304

Query: 371 NSHNTDKILY 380
            + + +++  
Sbjct: 305 TTLDGERMRE 314


>gi|224369359|ref|YP_002603523.1| TPR domain protein [Desulfobacterium autotrophicum HRM2]
 gi|223692076|gb|ACN15359.1| TPR domain protein [Desulfobacterium autotrophicum HRM2]
          Length = 762

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 75/256 (29%), Gaps = 31/256 (12%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             LA+               Y   +L   I +A+ + + A    + ML +   R  A+  
Sbjct: 418 GDLAQAEREISKVLKALPRHYNSNILLGNINMAKGESDKAAAIFKSMLTLDPKRPEALVG 477

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L        D  ++  Y  +AL I+PD   V   V+   V  K+  +A    +++ K   
Sbjct: 478 LGRLFGIKRDNEASLSYFEQALAIAPDQMDVFSNVIAILVSQKKIDQAQERCDKRLKAEN 537

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 AIL   ++       D   +     +++      I                   
Sbjct: 538 ITPLTEAILFNIKANLYLTAKDFTKAEDFFKKAIASDPQFI------------------- 578

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                        P ++          T   +     L +   E      +++ +  E G
Sbjct: 579 ------------QPYLSLTSLLKFQSRTDEAITEYKALIKKRPELAAPENLLATLFDEKG 626

Query: 340 SIDQAHAKAMLAMKIA 355
             D A      A++I 
Sbjct: 627 EFDLAETHYKRALEID 642



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 98/273 (35%), Gaps = 12/273 (4%)

Query: 92  LMSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           +++   A      +   +++       N     +L  ++  A  + + A  +++  L+I 
Sbjct: 239 MLAGFYAGRQSFQQAEETFLKAIDLNPNHVKARMLLARLYNATGREDQAEAQMQKALEIE 298

Query: 151 ATREFAVYSLYFE--SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                AV + Y E       +   A+    + L+  P+     E   +   L K++  AI
Sbjct: 299 P-ENVAVKNTYAEFYILHRKNKE-AETLVDEILEQRPNYSPARELKGKLLALKKDYDGAI 356

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
           +      +   +  +     L+  +L   +KG +  +     E+L+   +   A    A 
Sbjct: 357 SIFRDLVQEEPDSPKFN--FLLGSAL--LEKGKVDQAMASLSEALEKKPDFHQARYLYAT 412

Query: 269 SLISQNKKRKAEVILEKIWKVNP-H--PEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
               +    +AE  + K+ K  P H    I     ++    +         +  ++ +  
Sbjct: 413 IHFKKGDLAQAEREISKVLKALPRHYNSNILLGNINMAKGESDKAAAIFKSMLTLDPKRP 472

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           E+LV + ++       + + +    A+ IAP +
Sbjct: 473 EALVGLGRLFGIKRDNEASLSYFEQALAIAPDQ 505



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 19/240 (7%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           LYF      DL++A++     +D  P  P     +   Y   + + +A     +      
Sbjct: 206 LYFFYLSQKDLDAAEKTLKALVDKKPGTPEPLIMLAGFYAGRQSFQQAEETFLKAIDLNP 265

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              + R +L    +      G    +     ++L++   ++      A+  I   K ++A
Sbjct: 266 NHVKARMLL----ARLYNATGREDQAEAQMQKALEIEPENVAVKNTYAEFYILHRKNKEA 321

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSE---------NTVGKLKRALRLEEINKESVESLVI 330
           E ++++I +  P+      Y+              +  G +     L +   +S +   +
Sbjct: 322 ETLVDEILEQRPN------YSPARELKGKLLALKKDYDGAISIFRDLVQEEPDSPKFNFL 375

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           +    LE G +DQA A    A++  P       L         +  +        L A+P
Sbjct: 376 LGSALLEKGKVDQAMASLSEALEKKPDFHQARYLYATIHFKKGDLAQAEREISKVLKALP 435



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 80/237 (33%), Gaps = 10/237 (4%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L     L       A ++   + Q+       +  L            A+R     L+  
Sbjct: 68  LLAMTYLNLGDGQEAFKEYLRLEQMEPGNVETLNRLAAFFLAGKKQPEAERRINTVLEKE 127

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P+             L +E     T + + +K  +        LL    L   DK  +  
Sbjct: 128 PNNIEARYLEAGLLALKRE--SVETLIERYQKILEIDPSQTKALLSLSRLYMVDK-KVDL 184

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIY 299
           +     ++L +   +           +SQ     AE  L+ +    P  PE    +A  Y
Sbjct: 185 AGESIKKALSIEPENTQIYATLYFFYLSQKDLDAAEKTLKALVDKKPGTPEPLIMLAGFY 244

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                ++     +  L+  ++N   V++ ++++++    G  DQA A+   A++I P
Sbjct: 245 AG--RQSFQQAEETFLKAIDLNPNHVKARMLLARLYNATGREDQAEAQMQKALEIEP 299


>gi|238763106|ref|ZP_04624072.1| hypothetical protein ykris0001_40450 [Yersinia kristensenii ATCC
           33638]
 gi|238698605|gb|EEP91356.1| hypothetical protein ykris0001_40450 [Yersinia kristensenii ATCC
           33638]
          Length = 389

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESAALTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEKDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W+ AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMSL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAASADKRCARVSIMQGRVYLAKGEYAKGVEALEQVLEQDKEVVSEALPMLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPQAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|167947845|ref|ZP_02534919.1| protoheme IX synthesis HemY [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 413

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 109/314 (34%), Gaps = 15/314 (4%)

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
             S P  L     +R   +  KAL  GL+ ++  +  +A K    V   H      L YL
Sbjct: 29  IWSIPRGLSAWRGRRRNRRAQKALTQGLVELSEGHWKVAEK--QLVRYAHQSETPLLNYL 86

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALD 182
              + A  + +       L+   Q     + AV  L              A    T    
Sbjct: 87  AAARAAQLQGEDGRRDHYLQQAHQSMPMADVAV-GLTQAELQLAHQQYEQALATLTHLRS 145

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENAD 238
           ++P   +V   + + Y   +EW +    L     +K  +A + +     L+  R    A 
Sbjct: 146 LAPKHVYVLRLLRRLYESQEEWQQLEALLPELRKRKVADAGDLDALELRLVEQRLQRVAQ 205

Query: 239 KGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           K       H   E   SL+     I A    ++ ++++ +    E +L    +      +
Sbjct: 206 KSGEEGLRHAWGELSASLRRRAELIGA---YSRLMLAEGRGELVESLLADALRSQWSESL 262

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             ++  +   +   +L+ A       +E    L I++++ L+     +A +    ++ I 
Sbjct: 263 LRLFGAIERGDPAQRLELAESWLRDRREDPLLLFILARLCLQNKLWGKARSYFEASIAIE 322

Query: 356 PRKEIFLLLAQIEQ 369
           P  + +  L  + +
Sbjct: 323 PNADAYRELGALLE 336


>gi|30249415|ref|NP_841485.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30138778|emb|CAD85355.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 929

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 102/318 (32%), Gaps = 43/318 (13%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
              +   +  ++ L  +  +  + +  A E  E   ++         +L       GD  
Sbjct: 367 ALKSVQQDPQLFALAGEAYMRSKDFTKASEYFEKAGELAPDNASLYTALAMSKMGQGDSK 426

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           SA     +A  +   +      +V  ++  +E+ +A+  +  +     +      +L   
Sbjct: 427 SAIADLEQAAQLDDQSGRAGVMLVLTHLQLREFDKALKAVESQLAEQPD----NPLLHNL 482

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---------------------- 269
           +      K D+  +     ++L +  +   A    A+                       
Sbjct: 483 KGGIYLGKKDLAKARSSFNQALSIQSDYFPAISNLARIDMQENHPEAAQQRFEDVLKRDK 542

Query: 270 ------------LISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRA 314
                        +++  K +A   LEK  + NP    P +     +L   +    L  A
Sbjct: 543 KNVQAMNALAGIALARGNKEEATGWLEKASRENPDELQPALQLGAHYLAVNDPGKSLALA 602

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSH 373
            +L+ I+ +++  + ++++  L  G  D A           P      L LAQI  +  +
Sbjct: 603 KKLQGIHPDNLSIVELLARSYLATGDKDAALENFQKLAARLPDSAPAQLQLAQIYSSMQN 662

Query: 374 NTDKILYWTQSALHAMPD 391
           N        + AL   PD
Sbjct: 663 NKAAA-GSLKKALTIKPD 679



 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 88/296 (29%), Gaps = 35/296 (11%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L    +LA  ++  A    E  LQ       A+  L   S    D+ SA  ++ +A+ ++
Sbjct: 142 LRGNASLALGKFEEAKVLFEQALQDKPGFSDALTGLARYSLARNDIESAMNFSEEAVKLN 201

Query: 185 PDAPWVTEAVVQQYVLA-------KEWSRAITF--------------------LNQKKKN 217
           P+                       ++ +AI                          + +
Sbjct: 202 PENSDAVLFRGDLLRAQNKIDEALADYDKAIKLNPESEAAYINRATISISTKKFEAAQAD 261

Query: 218 AKEWNRNRAILLIA---RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                +     L+A   ++L +  +G    +       L      + + + A  +  +  
Sbjct: 262 LDAVRKIAPGSLLAAYTQALLDFSQGKHAVALETLQRILSSAPGHLPSVLLAGATQFALG 321

Query: 275 KKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
              +A   +E+  K  P+   A        L +      +       +  ++  +   + 
Sbjct: 322 SFPQAGQYVEQYLKAIPNNLYAIKLMASIQLKNNQVKQAITTLTPALKSVQQDPQLFALA 381

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +  +      +A      A ++AP    ++  LA  +     ++   +   + A 
Sbjct: 382 GEAYMRSKDFTKASEYFEKAGELAPDNASLYTALAMSKMGQ-GDSKSAIADLEQAA 436



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 86/247 (34%), Gaps = 13/247 (5%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + + +  SQ     +  L++ L+  I L ++    A       L I +    A+ +L   
Sbjct: 461 KALKAVESQLAEQPDNPLLHNLKGGIYLGKKDLAKARSSFNQALSIQSDYFPAISNLARI 520

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +     +AQ+     L           A+    +       A  +L +  +   +   
Sbjct: 521 DMQENHPEAAQQRFEDVLKRDKKNVQAMNALAGIALARGNKEEATGWLEKASRENPD--- 577

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 +          D   S   A +   +  +++      A+S ++   K  A    
Sbjct: 578 -ELQPALQLGAHYLAVNDPGKSLALAKKLQGIHPDNLSIVELLARSYLATGDKDAALENF 636

Query: 284 EKIWKVNP--HP---EIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALE 337
           +K+    P   P   ++A IY+ + +       LK+AL    I  +  E+ ++ +++A+ 
Sbjct: 637 QKLAARLPDSAPAQLQLAQIYSSMQNNKAAAGSLKKALT---IKPDLWEAKLMQAQLAVA 693

Query: 338 MGSIDQA 344
              ++ A
Sbjct: 694 ADRVEDA 700



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 96/273 (35%), Gaps = 16/273 (5%)

Query: 126 EVQIALAERQYNIA----HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           E +    +     A       L+     P  R      L     R GD+ SA++   KAL
Sbjct: 42  EAKQYQQQGNDKAAIIQLKNALQQSPNDPEIRYL----LGTLYNREGDIQSAEKELNKAL 97

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           D+  D   V   + + ++   ++ + +     K  +   +    A LL  R   +   G 
Sbjct: 98  DLGMDPVKVLPGLSRAWLGMGKFQQVLDE-TGKLSDKGNF----AELLALRGNASLALGK 152

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +     ++L+       A    A+  +++N    A    E+  K+NP    A ++  
Sbjct: 153 FEEAKVLFEQALQDKPGFSDALTGLARYSLARNDIESAMNFSEEAVKLNPENSDAVLFRG 212

Query: 302 --LLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             L ++N +   L    +  ++N ES  + +  + I++     + A A      KIAP  
Sbjct: 213 DLLRAQNKIDEALADYDKAIKLNPESEAAYINRATISISTKKFEAAQADLDAVRKIAPGS 272

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +      +   +       L   Q  L + P 
Sbjct: 273 LLAAYTQALLDFSQGKHAVALETLQRILSSAPG 305



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 63/180 (35%), Gaps = 13/180 (7%)

Query: 69  PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
              L    + +   K + AL        +     A +  +   +++    + +       
Sbjct: 739 EKALSRQKNSQLLIKLHTALSQ------SGKEKQADQRLNQWLKEN--PTDAVTRTYLAG 790

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           + LA ++Y+ A ++ + +L+        + +L +   +  D   A  YA KA   +PD+P
Sbjct: 791 VYLASKKYDPAIKEYQTILKQHPDHAATLNNLAWVYQQKKDP-VALEYAEKAYKQAPDSP 849

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            + + +    +   +  R  + L +      E    R       ++     G+   +  +
Sbjct: 850 AILDTLGWILIEKGDAERGTSLLQKAVTAVPEAAEIRYH----YAVGLFKSGNKAEARQE 905


>gi|241205407|ref|YP_002976503.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859297|gb|ACS56964.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 1237

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 89/263 (33%), Gaps = 18/263 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +A  TG +     N   A ++     Q+    +  L  +   Q+A          E +E 
Sbjct: 349 QAYTTGFLK----NPHAALEIIKKAEQR-YPDDPTLPAV-RAQLAELTDDREQMKEAIER 402

Query: 146 MLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            L   P      +  + Y  +    D+N A     +A++++P       ++         
Sbjct: 403 SLSLDPDHPMALSARASYK-AVYQSDVNGALADLNRAIELAPGGSGTLNSLGLLQSSR-- 459

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A     +  K A E +    +L    ++   D+G M  + H+   ++ L  +  +A 
Sbjct: 460 --DANGEAEKAFKEAIELDPQDPLLRANLAILYLDQGRMKEAKHEIDTAIALDPSFDIAL 517

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEI 320
           +   +  +   ++ KA   L      NP    + +           ++     L   + +
Sbjct: 518 LARGRYYLQTGERDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRL 577

Query: 321 NKESVESLVIVSKIALEMGSIDQ 343
           +K     ++   + A+++   D 
Sbjct: 578 DKNDP--VISAFRTAVDIDDYDA 598



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 106/356 (29%), Gaps = 63/356 (17%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
           +R   + + AL   + S        A  + +   ++ T   +  V L++  IA +E++Y 
Sbjct: 238 ERRTTEDWLALAE-VQSAFDGRRAAAATLTNIRDRKLTAAQQARVDLIDATIAGSEKRYG 296

Query: 138 IAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT--EA 193
            A +  +  L    P  R  A Y  YF          A+  A  A    P A       A
Sbjct: 297 DAAKLFQKALPHLDPIRRNMAQYGGYF----------ARSLAEPAHAEQPPANTTGPYGA 346

Query: 194 VVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q Y     K    A+  + + ++   +     A+    R+       D          
Sbjct: 347 IMQAYTTGFLKNPHAALEIIKKAEQRYPDDPTLPAV----RAQLAELTDDREQMKEAIER 402

Query: 252 SLKLCDNSIMASICAAKSLIS---QNKKRKAEVILEKIWKVNP----------------- 291
           SL L  +  MA   +A++      Q+    A   L +  ++ P                 
Sbjct: 403 SLSLDPDHPMA--LSARASYKAVYQSDVNGALADLNRAIELAPGGSGTLNSLGLLQSSRD 460

Query: 292 -HPEIANIYTHLLSENTVGKLKRAL-------------------RLEEINKESVESLVIV 331
            + E    +   +  +    L RA                        ++     +L+  
Sbjct: 461 ANGEAEKAFKEAIELDPQDPLLRANLAILYLDQGRMKEAKHEIDTAIALDPSFDIALLAR 520

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +  L+ G  D+A    + A    P      L+         +         +A  
Sbjct: 521 GRYYLQTGERDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADR 576


>gi|157370890|ref|YP_001478879.1| tetratricopeptide repeat-containing protein [Serratia
           proteamaculans 568]
 gi|157322654|gb|ABV41751.1| Tetratricopeptide TPR_2 repeat protein [Serratia proteamaculans
           568]
          Length = 389

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 31/259 (11%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSA-----QRYATKALDIS 184
            + + A    + +++        R  AV  L  +    G  + A     Q    +   IS
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGMYDRAEDMFGQLIGEEDFRIS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W +AI    +  K  K+  R   A      +L+     D+ 
Sbjct: 143 -----ALQQLLVIHQATSDWQKAIDVAEKLVKLGKDKQRIEIAHFYCELALQAMGSDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVIL--EKIWKVNPHPEIAN 297
            +      +          SI   +  ++Q +  KA      +L  +K       P +  
Sbjct: 198 KAMGLLKRAASADKQCARVSIMVGRIYMAQGEYAKAVESLTRVLNQDKELVSETLPMLHE 257

Query: 298 IYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            Y HL   ++    LKR     E N  +  + +++++I  +    D         ++  P
Sbjct: 258 CYQHLEQQQDWADFLKRC---VEENTGAT-AELMLAEIIEQNEGRDVVQVYINRQLQRHP 313

Query: 357 RKEI-FLLL----AQIEQA 370
              + + L+    A  E  
Sbjct: 314 TMRVFYRLMDYHLADAEDG 332


>gi|329119577|ref|ZP_08248259.1| HemY protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464315|gb|EGF10618.1| HemY protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 400

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 117/376 (31%), Gaps = 12/376 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  L+    + +  +   +  + +  +V    G  L R    + +  L   +  + +L  
Sbjct: 1   MKALLWILILFAAAVGLSVASTMFSGNVYFQIGATLARVDLKLFVPALILAVVLFYILVQ 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-E 119
                   PA L      R   K    L    ++        A +  + V +        
Sbjct: 61  FLGGLAGIPARLQRFGTSRRERKAGIGLNAAGLAYFEGRYQKAEQEAAKVLKNKEAGEIR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178
            L  ++    A       +    LE + ++PA R+ + Y +  E +    D  +A+    
Sbjct: 121 ALALMIAAHAADRMNDAELRGRYLEEIAELPADRQLSRYLMLAEDALNRCDYPAAESNLA 180

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  ISP    +    ++      + + A+     + +     N   A      +     
Sbjct: 181 AAAKISPRLTRLLRLQLRYAFDHGD-AEAVLAQTAELEKQHAANTGEAAQYRDWAYRRLL 239

Query: 239 KGDMIASYHDAIESLKLCDN-SIMASICA--AKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            G   A        LK   +     S+CA  A+   +    + A   +EK +  N  P +
Sbjct: 240 AGASDA--DGLKRVLKRIPDPLKSGSLCAAVAEKYENLGLYQSAAAWVEKYYPQNGQPAL 297

Query: 296 ANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +     +L  +     +  A    +   +  + LV +  +A       +A       
Sbjct: 298 LPPFVQSVAYLADKEQRKAVDAAEGWLQTRPKDADLLVSLGLLAYGKQLWGKAQGYLEAG 357

Query: 352 MKIAPRKEIFLLLAQI 367
           +      +  L LA++
Sbjct: 358 IAERDTPQARLALAKV 373


>gi|209528250|ref|ZP_03276715.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209491322|gb|EDZ91712.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 594

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 8/179 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + +  L + Q + A +  E +L+I  T    +  L   S R GDL  A++  TKAL++ P
Sbjct: 26  QAEAYLQQGQVDDARKACEQLLKIQPTSAVGLKILGDVSLRGGDLEGAKQNYTKALELQP 85

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +   V   +   Y  +++W +A     +      E+    A      +         + +
Sbjct: 86  NWAEVYANLGSLYARSQQWEQAQAAYQKAISIKPEF----AGAYRNLAKVWTQLNRPLDA 141

Query: 246 YHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                ++  L  +++ A    A    L+ Q    +A+   +    +N  P +A  Y +L
Sbjct: 142 IRTQYKAYTLEPHTVSAQEHLALGDGLMQQGMAAEAQACYQNAINLN--PNLAAAYQNL 198



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 15/180 (8%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P  P       + +   K+W +A++   +  +   + N   A  +   +L+    G+M 
Sbjct: 281 RPVNPETVLQEAKAFCAMKKWEQAVSACQKALR--LDPNLAEAYKIQGNALQVL--GEME 336

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL- 302
           A+     ++L++                 +++  KA    ++   +  +P  A +Y +L 
Sbjct: 337 AAVRSYNKALEVKPQFPEVHANLGSLYAQEDRLEKAVTCYQQA--IAQNPNFAGVYRNLA 394

Query: 303 -------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                     +    L++A  L E NK + E  V +    L  G +DQA+     A+++ 
Sbjct: 395 KVLERLGREGDASICLEKAYTL-EPNKATPEDHVRLGNTRLGQGKLDQAYESYQRALELN 453


>gi|238757085|ref|ZP_04618273.1| hypothetical protein yaldo0001_17410 [Yersinia aldovae ATCC 35236]
 gi|238704915|gb|EEP97444.1| hypothetical protein yaldo0001_17410 [Yersinia aldovae ATCC 35236]
          Length = 389

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 89/254 (35%), Gaps = 21/254 (8%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W+ AI    +  K  KE  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKENQRLEIAHFYCELALQAMGSDDLDKATGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  I++ +  K    LE++ +          P +++ Y HL
Sbjct: 203 LKKAASADKQCARVSIMQGRVHIARGEYAKGVAALERVLEQDKEVVSEALPMLSDCYQHL 262

Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI- 360
              E     LKR     E N  +  + +++++I  +    D A       ++  P   + 
Sbjct: 263 QQPEAWASFLKRC---VEDNTGAT-AELMLAEILEQQEGRDVAQTYINRQLQRHPTMRVF 318

Query: 361 FLLL----AQIEQA 370
           + L+    A  E+ 
Sbjct: 319 YRLMDYHLADAEEG 332


>gi|218885795|ref|YP_002435116.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris
           str. 'Miyazaki F']
 gi|218756749|gb|ACL07648.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris
           str. 'Miyazaki F']
          Length = 883

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 24/297 (8%)

Query: 99  NIPLARKM------------HSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKL 143
           +   AR+M             +    +            + L   + LA +    A ++L
Sbjct: 329 DHDAARRMVCSILLAQRRLDEAMQEARKLLDRNPGDANAHFLMAGVLLAGKDKRGAEKEL 388

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           E  L        A+  L       G ++ A      A+  +PD      A+   ++   E
Sbjct: 389 EAGLAQEPAHVGALLQLSTLKQSEGRMDEALADLRTAVVAAPDNIIARNALYAFHLGRGE 448

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
             +A   + +   N        A+L        A+ G    +     ++ +       A 
Sbjct: 449 TDKAEKVVLEGVNNTP----QDAVLYTMLVPLYANAGKEAKALDAVAKAHRADPAFADAY 504

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEI 320
           +   +      +  +A    E    V+P  P        LL     T     R  R   +
Sbjct: 505 LAGLRVHAGAGRVEQALAESEAYLAVSPDSPGFLVASGALLDLLGRTTEADARFDR--AL 562

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
             +  + +++V+  A   G  D+A      A++   ++++   LA +    +     
Sbjct: 563 ASKDRQVVLVVANRAAATGRTDKARQVLEAALQADNQEDLREALAVLLVRENKPDAA 619



 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 89/271 (32%), Gaps = 15/271 (5%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +L E +  + +     A    +  L+           L      +G ++ A+    K   
Sbjct: 29  FLSEGRKLMGQGNPAGAVVLFKNALEKDPGDYTLHLELGRAYYALGKIDLAENELQKCYR 88

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD- 241
             P+ P +  A+ + YV       A    +Q   + +++  +      +R L     G  
Sbjct: 89  QQPNDPALNLALGEVYV-------ARNLPDQALVHVQKFEEHAGATAASRELAGLAYGQA 141

Query: 242 --MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
                +     ++  L    I A +   +  + +   R A  +L++   V P  + A + 
Sbjct: 142 RRTEEARKALEQAFGLDPKRISARLALGRLFLYRGDLRAASAVLQEALAVGPD-DTAALA 200

Query: 300 TH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                 L    T   L    ++ ++      +  +V  + L++G++ +A   A       
Sbjct: 201 LQGDILLRQGETDKALSVFRKVTQLTPRDENARYMVGVLQLQLGNVAEAAQTAAAMRADF 260

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
               +  LL     A   +  +     Q ++
Sbjct: 261 KDSALVFLLEGALAATRKDFAEAATLLQRSV 291



 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 82/274 (29%), Gaps = 26/274 (9%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMM-LQIP 150
           + A      AR++     Q     +  E L  LL       E + + A      +  Q P
Sbjct: 577 AAATGRTDKARQVLEAALQADNQEDLREALAVLLV-----RENKPDAALALYSSIEAQRP 631

Query: 151 ATREFAVYSLYFESCR-IGDLNSAQRYA-TKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                  Y L     R      +A+           P           Q          I
Sbjct: 632 REALIGRYRLLTHMRRNQEAAETARTLGLRDGGSSLPTMLEAYALERMQQREQG-----I 686

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L+   +     +     LL+A        GD+  +     ++LK+  + +   +    
Sbjct: 687 QLLDAAYRQKGSTD-----LLLAMGGMLERGGDLARAEACYKDALKVQPDDVPTLLAMGT 741

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKE 323
             + +    K+  + EK  ++ P        +A  Y    +      L+ AL+    + E
Sbjct: 742 LQMRRKAYSKSVPVYEKALRLAPANVVAMNNLAMAYLQ-QNGRAQMALQLALQAYTHSPE 800

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + E L  +    +  G  D+A      A+  AP 
Sbjct: 801 NPEVLDTLGACMMANGRADEATRAYGRAVAAAPD 834



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 7/180 (3%)

Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
             LL     + E       A    +  L++       + ++     R    + +     K
Sbjct: 699 TDLLLAMGGMLERGGDLARAEACYKDALKVQPDDVPTLLAMGTLQMRRKAYSKSVPVYEK 758

Query: 180 ALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           AL ++P        + +           A+    Q   ++ E       +L         
Sbjct: 759 ALRLAPANVVAMNNLAMAYLQQNGRAQMALQLALQAYTHSPENPE----VLDTLGACMMA 814

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
            G    +      ++    ++       A++     +K KA   L    +    PE A  
Sbjct: 815 NGRADEATRAYGRAVAAAPDNPTLRYHHAEAHFKAGRKDKAAEELRVALQTPDFPEAAQA 874



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 88/283 (31%), Gaps = 20/283 (7%)

Query: 95  IAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           +A   + +AR +           +           L        R+   A + LE    +
Sbjct: 98  LALGEVYVARNLPDQALVHVQKFEEHAGATAASRELAGLAYGQARRTEEARKALEQAFGL 157

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
              R  A  +L       GDL +A     +AL + PD            +   E  +A++
Sbjct: 158 DPKRISARLALGRLFLYRGDLRAASAVLQEALAVGPDDTAALALQGDILLRQGETDKALS 217

Query: 210 FLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              +  +   ++ N    + ++   L     G++  +   A        +S +  +    
Sbjct: 218 VFRKVTQLTPRDENARYMVGVLQLQL-----GNVAEAAQTAAAMRADFKDSALVFLLEGA 272

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKE 323
              ++    +A  +L++   + P       Y  L        +    L +   +     +
Sbjct: 273 LAATRKDFAEAATLLQRSVALRP---SVEGYYKLGMALYAKGDLEMALSQFNTVLASTPD 329

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365
              +  +V  I L    +D+A  +A   +   P       L+A
Sbjct: 330 HDAARRMVCSILLAQRRLDEAMQEARKLLDRNPGDANAHFLMA 372



 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 10/231 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +    D   A     +++ + P      +  +  Y    +   A++  N    +  + + 
Sbjct: 274 AATRKDFAEAATLLQRSVALRPSVEGYYKLGMALYA-KGDLEMALSQFNTVLASTPDHDA 332

Query: 224 -NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             R +  I  +    D+     +  +A + L        A    A  L++   KR AE  
Sbjct: 333 ARRMVCSILLAQRRLDE-----AMQEARKLLDRNPGDANAHFLMAGVLLAGKDKRGAEKE 387

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMG 339
           LE      P    A +    L ++       L           +++ +   +    L  G
Sbjct: 388 LEAGLAQEPAHVGALLQLSTLKQSEGRMDEALADLRTAVVAAPDNIIARNALYAFHLGRG 447

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             D+A    +  +   P+  +   +     AN+    K L     A  A P
Sbjct: 448 ETDKAEKVVLEGVNNTPQDAVLYTMLVPLYANAGKEAKALDAVAKAHRADP 498


>gi|116622427|ref|YP_824583.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225589|gb|ABJ84298.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 783

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 110/303 (36%), Gaps = 18/303 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A ++++ + ++    N+     L     L +     A ++L+ ++        + 
Sbjct: 338 GKRSDAAEVNAQILKEVPDDNDA--RGLSATFLLDKGDVAKALQELQAVVTRAPENPVSR 395

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L       G+   A++   KA+++ PD      A+ Q  V   E+  A+    +  K 
Sbjct: 396 YNLGRAHAARGEWEQARQQFAKAIELRPDYVLARLALAQLQVTRGEFEAALKTAEEILKF 455

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIMASICAAKSLISQNK 275
             + N N  ++  A  +     GD        +++     +    +  +  A     +NK
Sbjct: 456 -DKGNVNARLIESAALMGQKKFGDSRVMLDAMLKTNPGSPDVLFQLGVVNLA-----ENK 509

Query: 276 KRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            ++AE    + +++NP      +  + T++    T   +K      + +    + L  + 
Sbjct: 510 FKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKTEEAVKLLQAESDKSPNRTDLLTALG 569

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKE----IFLLLAQIEQANSHNTDKILYWTQSALHA 388
             A+  G  D A       ++   + +    I+L L +  +        I    Q A  +
Sbjct: 570 NTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETYRRKGDLNGAIQA-LQKARES 628

Query: 389 MPD 391
           +PD
Sbjct: 629 LPD 631



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 17/275 (6%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
             Y         +  V +   +   A   +  A      +++   + +FA   LY     
Sbjct: 174 EEYRRADSIKPGQQGVMMQLARALSARGDFAGAERLYRQVIEKDKSYQFAYTELYRIFLF 233

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
                 A+    +A   +P   +    ++   Y   +     ++ LNQ K ++K+++  +
Sbjct: 234 QNKPAQAEAMLKEAYQNNPKQ-YGFLTLLAMHYYGQQRRDDMVSVLNQIKSHSKDFD--Q 290

Query: 226 AILLIARSLENADKGDMI--ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA---- 279
           A L +         GD          ++  K         I   + L+ Q K+  A    
Sbjct: 291 AYLTVGDFYLRMGDGDSAIREYKEGILKDPKKKLTYQKRVI---EVLMRQGKRSDAAEVN 347

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             IL+++   N    ++  +  L   +    L+    +     E+  S   + +     G
Sbjct: 348 AQILKEVPDDNDARGLSATFL-LDKGDVAKALQELQAVVTRAPENPVSRYNLGRAHAARG 406

Query: 340 SIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQAN 371
             +QA  +   A+++ P      + L   Q+ +  
Sbjct: 407 EWEQARQQFAKAIELRPDYVLARLALAQLQVTRGE 441



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 61/162 (37%), Gaps = 7/162 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A  + +    + +  +  +V      +  A  +   A +  E  +++      A+
Sbjct: 613 GDLNGA--IQALQKARESLPDNIIVLSTLALVLDAASRRPEAKQVYEATIKLDPNNAVAL 670

Query: 158 YSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            +L +  +   GDL+ A   A +A  + P+   +++ +   Y+     + AI       K
Sbjct: 671 NNLAFMMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAANAIDIF----K 726

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +      N +      ++  + +GD   +     E+LK   +
Sbjct: 727 DLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPD 768



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 81/290 (27%), Gaps = 51/290 (17%)

Query: 82  DKGYK---ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN---EYLVYLLEV--QIALAE 133
            + Y+   A   GLM I      +A+       +     +        LL      A+  
Sbjct: 518 RRAYQLNPANSRGLMGIV--ETNMAQNKTEEAVKLLQAESDKSPNRTDLLTALGNTAVRA 575

Query: 134 RQYNIAHEKLEMMLQ-IPATREFA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +Y+ A +    +L+     +      +  L     R GDLN A +   KA +  PD   
Sbjct: 576 GKYDFAIQTFNRVLEQTDKGKAQGDIYLR-LGETYRRKGDLNGAIQALQKARESLPDNII 634

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHD 248
           V   +      A     A        K     + N A+ L   +   A+ G D+  +   
Sbjct: 635 VLSTLALVLDAASRRPEAKQVYEATIK----LDPNNAVALNNLAFMMAESGGDLDEALTK 690

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           A  + +L  N    S       + +N    A  I                          
Sbjct: 691 AQRAKQLLPNLFEISDTLGWIYLKKNLAANAIDI-------------------------- 724

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                   L             ++    + G   +A  +   A+K  P K
Sbjct: 725 -----FKDLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPDK 769


>gi|239814384|ref|YP_002943294.1| HemY domain protein [Variovorax paradoxus S110]
 gi|239800961|gb|ACS18028.1| HemY domain protein [Variovorax paradoxus S110]
          Length = 427

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 99/391 (25%), Gaps = 39/391 (9%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
           +    +++ W       S  ++L IL        L         S P        ++   
Sbjct: 23  NNQGTITVFWPPWRVDLSLNLVLVILLAAFVLLHLALRGLAALFSLPTQARQWRLQQKER 82

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ--------HTFHNEY----LVYLLEVQIA 130
             + AL   ++ + +     ARK       Q         +         L +LL  + A
Sbjct: 83  MLHSALLDAMVQLLSGRFSRARKAAQAALVQEKTLAALGASLPQSQQVRVLSHLLAAESA 142

Query: 131 LAERQYNIAHEKLEMMLQI---------PATRE-FAVYSLYFESCRIGDLNSAQRYATKA 180
            A +        L+  L           P TRE   + +    +    D   A     + 
Sbjct: 143 QALQDRPARDAHLQQALNESVERNVLASPETREGVQLRA-ARWALEDHDPAGALTRLEEL 201

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                         ++          A+       K+    +     ++   + E     
Sbjct: 202 PQGVQRRTLALRIRLKAARQDGRTLEALETARLLAKHRAFSDGAAQSIVRGLATELLSGA 261

Query: 241 DMIASYHDAIESLKLCDNSIM-ASICAA-KSLISQNKKRKAEVILEKIWK---VNPHPE- 294
              A    A   L   +  +   +I AA + +  +     A   L   W+     P    
Sbjct: 262 HDPAQLLRAWAELDAAEREMPEVAIHAAQRMVALRGDLSLARGWLLPAWERMVSQPRGLG 321

Query: 295 ------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +A      L       L R    +  N        +     ++     +A    
Sbjct: 322 DTLRVKMARALEAGLDSVDADWLARIETAQRNNPRDPNLQYLAGMACMKRQLWGKAQQLL 381

Query: 349 MLA----MKIAPRKEIFLLLAQIEQANSHNT 375
           M A          +  +L LA++ +      
Sbjct: 382 MQAGLGLQDTELYRRAWLALAELAETRGDEE 412


>gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1]
 gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 1180

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 13/283 (4%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
             L  +    +  A +      ++   + E L  L    IAL   +   A ++    LQ  
Sbjct: 865  ALAYLGVGRLDAAYESARRALERRNVYPEALALL--GDIALQRGKLAEAEQQYRAALQQN 922

Query: 151  ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             +   A   L   +   G+ + A  +   A+   P +P     + +  +   +   AI  
Sbjct: 923  PSLAAAHIGLGRVAATGGNWSIAAGHFLNAVQGEPQSPDALLWLGEARLRTADIDGAIAA 982

Query: 211  LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             ++       +           +      G +  +  +A  +L+L      A++   K  
Sbjct: 983  YSEALHLRDNFPE----AYFGLAQAEYGAGRIEDALRNATRALELRPRYAEAALLLGKIY 1038

Query: 271  ISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
              Q    +A    ++   +NP    P        + ++      +       ++    E+
Sbjct: 1039 ERQGYSMRALEAYKRAIDINPRLAEPHYRRALLLIRADRLNEAREELEVATRLDPNFAEA 1098

Query: 328  LVIVSKIALEMGSIDQA----HAKAMLAMKIAPRKEIFLLLAQ 366
               + ++     +I  A               P    +  LA+
Sbjct: 1099 HYWLGRVYFAQRNIQAALNRFREAVNRQGGAYPEARYYQGLAE 1141



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 37/257 (14%)

Query: 135  QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            +YN A    E  +          Y        +G L++A   A +AL+     P     +
Sbjct: 839  EYNAAVMAYERAIAQQPASATLRYGAALAYLGVGRLDAAYESARRALERRNVYPEALALL 898

Query: 195  VQQYVLAKEWSRAITFLNQKKKNAK--------------------------------EWN 222
                +   + + A        +                                   E  
Sbjct: 899  GDIALQRGKLAEAEQQYRAALQQNPSLAAAHIGLGRVAATGGNWSIAAGHFLNAVQGEPQ 958

Query: 223  RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               A+L +  +       D+  +     E+L L DN   A    A++     +   A   
Sbjct: 959  SPDALLWLGEAR--LRTADIDGAIAAYSEALHLRDNFPEAYFGLAQAEYGAGRIEDALRN 1016

Query: 283  LEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              +  ++ P    A +     +     ++  L+   R  +IN    E     + + +   
Sbjct: 1017 ATRALELRPRYAEAALLLGKIYERQGYSMRALEAYKRAIDINPRLAEPHYRRALLLIRAD 1076

Query: 340  SIDQAHAKAMLAMKIAP 356
             +++A  +  +A ++ P
Sbjct: 1077 RLNEAREELEVATRLDP 1093



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 8/160 (5%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSL-YFESCRIGDLNSAQRYATKA 180
            L+          Y+ A    + + +  PA R   + +L        GD   +     +A
Sbjct: 238 RLVRALADYKRGAYSNAIATFDELERDYPALRPGLLRTLRAVIWWARGDYEQSVGEFQRA 297

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           +   PDA     A +   + A ++      +    N+     ++ +    +L  + +LE 
Sbjct: 298 IAAMPDASPAELARLYASLGAVQYDMGDPASRESFNRAIALLQDQD--LGVLRYSLALEE 355

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              GD   +     ++ +L   S    +  A++     + 
Sbjct: 356 LRAGDPADAAVSLEQARRLLPPSTPLLVTLARAYRLDGQL 395


>gi|300312067|ref|YP_003776159.1| tetratricopeptide TPR_4 containing protein [Herbaspirillum
           seropedicae SmR1]
 gi|300074852|gb|ADJ64251.1| tetratricopeptide TPR_4 containing protein [Herbaspirillum
           seropedicae SmR1]
          Length = 924

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 96/286 (33%), Gaps = 9/286 (3%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           +    + Q      +  +  L     L   +   A    E  LQ  A    A+  L   +
Sbjct: 116 QFAKALEQTAALPAQGEIAALRGNAYLGLGKSAEAKAAFETALQSDAKLPTALIGLARSA 175

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
                L++A RYA +A+  +PD   V                A   L Q  K   +    
Sbjct: 176 LLERKLDTATRYADEAIAKNPDNNEVLMFKAHLLSSQGATDEAAAVLGQVIKRKPD---- 231

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +   L+AR+     +     +  D   + K    +++A+   +    SQ K   A   ++
Sbjct: 232 QVDALLARADLEIRQRQFAQAEADIQAAQKAKPKNLLATYMQSLLAFSQGKHADALTEIQ 291

Query: 285 KIWKVN----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           K+        P   +A    + L      +L     L+++  +   +  +++   L+ G 
Sbjct: 292 KVQAGAPDYMPAALLAGAIQYALGSMPQAELSLGKYLDKV-PDDNYARKLLASAQLKNGQ 350

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
             +A A    A+K   +    L LA      + +  K   + + A 
Sbjct: 351 KAKAAATLEPALKSGQQDAELLALAGEIAIENKDFAKAADYYEKAS 396



 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 72/241 (29%), Gaps = 41/241 (17%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            +V  L+  + LA+  Y  A +  E  L I  +   A  +L     +      A++    
Sbjct: 471 PIVQNLKGGVYLAQNDYANARKAFEKALAIDPSFFAATANLAQLDLKDNQPELARKRFE- 529

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
                                          L   KK+           + A +      
Sbjct: 530 -----------------------------AVLATDKKSIP--------AMTALATLAERN 552

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G    +      ++     S+ AS       +  ++K K   +  K+   NP   +A   
Sbjct: 553 GHPQEATQWLERAVNENPESVQASAQLIARYLLTDQKEKGLTMARKLQASNPGDAVALEM 612

Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  S +T G L    RL  +  +S  + + ++ +      +  A   A  A++I P
Sbjct: 613 LGQAQFASGDTQGALASYQRLATLQPDSAPTQLRLASLYQSAKDVQGAADAARKALEIQP 672

Query: 357 R 357
            
Sbjct: 673 D 673



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 12/216 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +  + GD  +A+     AL    +       + Q Y+     + A   L +      + 
Sbjct: 41  RQYQQKGDSAAAEIQLKNALQKDGENAQARLMLGQIYLANGNAASAEKELRRALSLGIKP 100

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            +    L  +  L+          +  A+E           +     + +   K  +A+ 
Sbjct: 101 EQVVPALTQSLLLQ--------GQFAKALEQTAALPAQGEIAALRGNAYLGLGKSAEAKA 152

Query: 282 ILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             E   + +   P   I    + LL        + A      N ++ E L+  + +    
Sbjct: 153 AFETALQSDAKLPTALIGLARSALLERKLDTATRYADEAIAKNPDNNEVLMFKAHLLSSQ 212

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSH 373
           G+ D+A A     +K  P +   LL  A +E     
Sbjct: 213 GATDEAAAVLGQVIKRKPDQVDALLARADLEIRQRQ 248


>gi|153820259|ref|ZP_01972926.1| hemY protein [Vibrio cholerae NCTC 8457]
 gi|126509193|gb|EAZ71787.1| hemY protein [Vibrio cholerae NCTC 8457]
          Length = 341

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 92/308 (29%), Gaps = 16/308 (5%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
           +    R   +  +    G++ +   +   A K  +  +  H      L YL+  + A   
Sbjct: 17  NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMPLLCYLVASEAANGM 74

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVT 191
                  ++   +         AV  L     +   GD  +A    T+     P    V 
Sbjct: 75  GDRAK-RDRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETLTQLQRNHPHNTVVL 132

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-----KGDMIASY 246
             + Q Y    EW   +  L +  K  +  N     L I             KG      
Sbjct: 133 NLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGILQDIASPKGSEGLMQ 192

Query: 247 HDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           H A  S KL      +M  I     LI +    +A  ++++  K    PE+  +   L  
Sbjct: 193 HWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQATPELYALLPELNI 249

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            +    +         +  + E+   + ++ L       A      A+ +      +  L
Sbjct: 250 SDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEKALSLRSSVSDYAYL 309

Query: 365 AQIEQANS 372
           A   +  +
Sbjct: 310 ADALEKQN 317


>gi|119947241|ref|YP_944921.1| HemY domain-containing protein [Psychromonas ingrahamii 37]
 gi|119865845|gb|ABM05322.1| HemY domain protein [Psychromonas ingrahamii 37]
          Length = 396

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 127/383 (33%), Gaps = 49/383 (12%)

Query: 21  VSHYPEDVSITWGNRL-YRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
           +S     + I+  N   Y T+    L     F F   L+  + R  LS  ++      +R
Sbjct: 21  ISSNKGYILISLDNYTTYETTIINALIATVVFYFLLGLIEWILRKLLSMSSITRGWFGQR 80

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
              K  +    G++++   N   A+K+ S  +++       L Y+     A  +  Y + 
Sbjct: 81  KTRKAQRNSLLGMLALLEGNSRQAQKLLSKSAEKTAA--PALTYIAAANAAQQQGDYALR 138

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA--TKALDISPDAPWVTEAVVQQ 197
              L+   +       AV  L +   +I     A       +     P    + +  +  
Sbjct: 139 DSYLQQATKSQKGCNLAV-GLVWIELQIEAKQFADALIKLKELDSTFPGNKRIAKLYLDI 197

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLENA--DKGD 241
           Y    +W+  I  L +++K     +                +  L    +L+    DK  
Sbjct: 198 YPPLNQWADYIEVLIKQRKYLSLVDTEFEAIKLNAYQHLFKQLALQSGEALQALWNDKSS 257

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSL----ISQNKKRKAEVILEKIWKVNPHPEIAN 297
                  A +S  L       +    K          +K      L++ + V        
Sbjct: 258 RSMRKDVAYQSAMLD------AFIEGKYYEFAEYFLGEK------LKEHFNV-------T 298

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  ++     +   K  L LE+  K+  E+      ++K+ L   +   A       +++
Sbjct: 299 LLAYVDKIKIMDNNKLILILEKQLKKDPENGAIHHALAKLKLNEDNESAAIEHLQKGVEL 358

Query: 355 APRKEIFLLLAQI-EQANSHNTD 376
            P  + F LLA+I E+A+  +  
Sbjct: 359 DPNVDDFALLAKILEKADRLDEA 381


>gi|123442240|ref|YP_001006221.1| tetratricopeptide repeat protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089201|emb|CAL12047.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 389

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W+ AI    +  K  KE  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKENQRLEIAHFYCELALQAMGSDDLDKAMSL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAASADKQCARVSIMQGRVHLAKGEYGKGVEALERVLEQDKEVVSEALPMLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|213425398|ref|ZP_03358148.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
          Length = 246

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 17/232 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ S  +         + YLL  + A        A+
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    K L+++P  P V  
Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
              Q Y+    WS  +  +    K       +RA+L     +   D+     
Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQ 244


>gi|332161861|ref|YP_004298438.1| tetratricopeptide repeat protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318605627|emb|CBY27125.1| heat shock (predicted periplasmic) protein YciM,precursor [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666091|gb|ADZ42735.1| tetratricopeptide repeat protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 389

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W+ AI    +  K  KE  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKLGKENQRLEIAHFYCELALQAMGSDDLDKAMSL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAASADKQCARVSIMQGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|238794721|ref|ZP_04638325.1| hypothetical protein yinte0001_18250 [Yersinia intermedia ATCC
           29909]
 gi|238725952|gb|EEQ17502.1| hypothetical protein yinte0001_18250 [Yersinia intermedia ATCC
           29909]
          Length = 389

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 86/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W+ AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLEKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  I++ +  K    LE++ +          P +++ Y HL
Sbjct: 203 LKKAAAADKQCARVSIMRGRVHIAKGEYAKGVEALERVLEQDKEVVSEALPMLSDCYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|33597225|ref|NP_884868.1| hypothetical protein BPP2645 [Bordetella parapertussis 12822]
 gi|33601071|ref|NP_888631.1| hypothetical protein BB2088 [Bordetella bronchiseptica RB50]
 gi|33573652|emb|CAE37937.1| putative exported protein [Bordetella parapertussis]
 gi|33575506|emb|CAE32584.1| putative exported protein [Bordetella bronchiseptica RB50]
          Length = 531

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/378 (11%), Positives = 103/378 (27%), Gaps = 18/378 (4%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           +  +V +         S  + + +L        +   +  + ++ P  L     +R  ++
Sbjct: 24  HAGNVLLLVWPWRIELSLTLTVLLLVAAFVTLYIGLRLLAWLVAIPDRLRAWRGRRAQER 83

Query: 84  GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
            ++ L  G + +       A K +     Q        L  L   + A    +Y    ++
Sbjct: 84  DHELLERGWIGLLEGRFAQAEKDLSKLFDQTKVRSRRVLAALSGARAAHNLGEYER-RDR 142

Query: 143 LEMMLQIPATREFAVYSLYFES---------CRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +    +  A  +  +     E+            G    A        D           
Sbjct: 143 MLESAREQAGEDAGL----QEATATVSADMLLDQGRAQQALDLLEPLQDGGARHLHTMRL 198

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++     +   R         +           L+ +        G  +  +    + L
Sbjct: 199 LLRAETALQHHERVFMLARGLLRRNAIGKAEAEQLIDSAGAARLRAGMAVDQWRPIWKDL 258

Query: 254 KLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           K  +  +   ++  A +     +  +A  ILE    V  +P +   Y    +     +L 
Sbjct: 259 KSDERLLPNIALAGAAAFEDAGEASEAARILEAAVAVKFNPALVAAYARCDAAQVPHRLA 318

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           +A    +      + L  +  + L      QA      ++      +   LL  +     
Sbjct: 319 KAETWLQQRPADTDLLTALGLLCLNGQLWGQAERYLQRSVSRRNDPQAHALLGSLYDRLD 378

Query: 373 HNTDKILYWTQSALHAMP 390
              D   +W      A  
Sbjct: 379 RPADAARHW--RQATAAR 394


>gi|42519019|ref|NP_964949.1| hypothetical protein LJ1093 [Lactobacillus johnsonii NCC 533]
 gi|41583306|gb|AAS08915.1| hypothetical protein LJ_1093 [Lactobacillus johnsonii NCC 533]
          Length = 434

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 10/253 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A +
Sbjct: 76  FPKEDLFKVYLAEILLNDGDEDDGLQLLYDVKPDSDAYLESLLDLADYYQSNGLIETAHQ 135

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  ++PD   +   + +   L+ ++S A+    +  KN K +     ++L  R   
Sbjct: 136 KLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFGE---VVLSQRIAA 192

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              K        + I+S +    SI A   A   ++S N  + A   L+++ +  P    
Sbjct: 193 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 252

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A      
Sbjct: 253 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 310

Query: 351 AMKIAPRKEIFLL 363
            +++AP      L
Sbjct: 311 GLEVAPDNSDLRL 323



 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 69/191 (36%), Gaps = 15/191 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +       +E  +     ++      Y+ A +    + +   T     +     S R
Sbjct: 135 QKLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT-----FGEVVLSQR 189

Query: 167 IGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE 220
           I    +      +A +            +A+ +     + A +   AI +L+Q  +   +
Sbjct: 190 IAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPD 249

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +     +L  A + E+ ++ +++ +    +   +L +         AK+  + N+  +AE
Sbjct: 250 YVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLDEAE 305

Query: 281 VILEKIWKVNP 291
            +L+K  +V P
Sbjct: 306 RLLKKGLEVAP 316


>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L]
 gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L]
          Length = 463

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 88/262 (33%), Gaps = 9/262 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           + P A +               +   L     L + +  +A E+ ++ + +  T   A Y
Sbjct: 62  DFPGAERAFR--KALEFDPYMAMGRYLLANTYLQQGKNQLALEQYQIAIALDPTLSQAYY 119

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L     + G  +SA     +AL  +P++  +   +            AI       +  
Sbjct: 120 NLGIAFYKEGAPDSAIAAYRQALSFNPESADIYYNLGLALESQGNQEEAIEHYQATIRLD 179

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            ++ +          L   ++  +  +     ++++     + A       L+ Q +K  
Sbjct: 180 PDYGK----AYYNMGLILVEQDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSA 235

Query: 279 AEVILEKIWKVNP--HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           AE    +  KV+P   P    +   L         + R   + E+  E+V++   +    
Sbjct: 236 AEESFREAVKVDPKLAPAQYQLAVILFEKGELAEAITRFRLVTELEPENVDAYRQLGAAL 295

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
              G   +A     LA+++ P 
Sbjct: 296 TANGEYAEAVTTLKLAVQLDPY 317


>gi|268589508|ref|ZP_06123729.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131]
 gi|291315177|gb|EFE55630.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131]
          Length = 390

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 106/337 (31%), Gaps = 55/337 (16%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   +F    L      +  +A   Y+ A    + +         
Sbjct: 84  GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMAAGVYDRAENMFQQLTDEVD---- 139

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                + +S                           ++++  Y L  +W++AI    +  
Sbjct: 140 -----FKQS-------------------------ALQSLLNIYQLTSDWTKAIETAGKLV 169

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K      R + A      + +     D+  +     ++ +  ++    SI   +  I Q 
Sbjct: 170 KLGHTELREQIAHFYCELATQQLASDDLEDALIFLNKAEQADNHCARVSIMKGRLFIEQG 229

Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              KA  +L+++++          P + + Y H    +         +    N  ++ + 
Sbjct: 230 NYDKAIHVLKQVYEQDRELVAETLPLLFDCYQHTGQADEWE--DYLRQCVAGNSGAI-AE 286

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL-AQIEQANSHNTDKILYWTQSAL 386
           + ++ I +E  + + A       ++  P   + + L+   +E+A      + L   +  +
Sbjct: 287 LYLADIIVEKQNHEAAANYINDQIQRHPTMRLFYRLMDYHLEEAEDGRAKESLILLRKMV 346

Query: 387 -HAMP-DPLWISDDGYLSSV---WLPLSPISKTLCYF 418
              +   P +       +S    W    P  ++    
Sbjct: 347 GEQIRTKPDYRCHKCGFTSRALYWH--CPSCRSWDTI 381


>gi|322432943|ref|YP_004210192.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9]
 gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 663

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 98/322 (30%), Gaps = 36/322 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATR 153
            N   A K +      +    + +  L   ++ LA    + A +    +L      P   
Sbjct: 82  GNTLEAIKGYERAISLNPADADSIELL--AKLLLASGTKDEALKLYRQLLSLCPDRPDVY 139

Query: 154 E-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                     E     D +++     +A    PD P     + ++     +  +AI    
Sbjct: 140 FNLGH---LLEF--DDDKDASLNIYREAARRFPDNPDAHFNLARKLKAEGQTQQAINSFE 194

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  +     A             G+   +    + ++K   +  +A       L+ 
Sbjct: 195 NVLLLKPD----DAETFNYLGTLFHLLGETDKAKESYLLAIKHKPDYPLALCNLGALLMD 250

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVES 327
             + + AE++L K  +++  P++   Y +L        NTV  ++   ++ + +    E+
Sbjct: 251 FGQWQVAEMMLRKAIELD--PDLLAAYCNLGSVLAQQGNTVAAIEALRQVLQRDPAHAEA 308

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP-------RKEIFLLLAQIEQANSHNTDKILY 380
           L  +      +G    A     LA+K  P             L A    A      ++  
Sbjct: 309 LCTLGNTMNNLGDEAGAMKCFHLALKANPGHALTRFNMSTLTL-AAGNFAEGWPDYELR- 366

Query: 381 WTQSAL----HAMPDPLWISDD 398
           W           +  P W  +D
Sbjct: 367 WQVRESSRNERHLTQPRWTGED 388



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 111/320 (34%), Gaps = 29/320 (9%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
             L TGL    A  +  A   ++ + + +  H + L   L   +A      +++   ++ 
Sbjct: 2   DLLQTGLAHHRAGRLSDASHCYTALLRLNPAHADALN--LSGVLARQRGDLSVSERFIKK 59

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            +    +     + L       G+   A +   +A+ ++P      E + +  + +    
Sbjct: 60  AIHQSPSVATYHHHLAKTHTHQGNTLEAIKGYERAISLNPADADSIELLAKLLLASGTKD 119

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+    Q      +  R      +   LE  D  D  AS +   E+ +   ++  A   
Sbjct: 120 EALKLYRQLLSLCPD--RPDVYFNLGHLLEFDDDKD--ASLNIYREAARRFPDNPDAHFN 175

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------THLLSENTVGKLKRALRLE- 318
            A+ L ++ + ++A    E +  +   P+ A  +       HLL E    K K +  L  
Sbjct: 176 LARKLKAEGQTQQAINSFENVLLLK--PDDAETFNYLGTLFHLLGET--DKAKESYLLAI 231

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI-----EQANSH 373
           +   +   +L  +  + ++ G    A      A+++ P      LLA         A   
Sbjct: 232 KHKPDYPLALCNLGALLMDFGQWQVAEMMLRKAIELDPD-----LLAAYCNLGSVLAQQG 286

Query: 374 NTDKILYWTQSALHAMPDPL 393
           NT   +   +  L    DP 
Sbjct: 287 NTVAAIEALRQVLQ--RDPA 304


>gi|298530866|ref|ZP_07018268.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510240|gb|EFI34144.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 644

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 11/203 (5%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y E+ +  D   A++ A K L  +P    + + +     +  + + A+  L Q       
Sbjct: 12  YAEALKKKDFARAEKIARKLLKKNPGDGRMLKYLGTVQAIQGKNAEALPRLEQAAGLLP- 70

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                A LL   +      G    +    ++ L +  +S    +  A          +A 
Sbjct: 71  ---GDAELLKNLAQNLEAMGRDEEAARRYLQMLDISPDSPSIHVRLAAIFGRAKNLHQAR 127

Query: 281 VILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
               +  +++PH      ++A  +  L       +L    ++  +N E   +   +  + 
Sbjct: 128 DHARRASELDPHNWDALMKLARAHHELEEPQKAKRL--YQKVLTMNPEHPPAYSSLGSVC 185

Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358
            E+ + ++A      A+++ P  
Sbjct: 186 RELNNPEEAREHLQRALELEPDS 208



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 98/284 (34%), Gaps = 41/284 (14%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             +   L K+N   G    Y G +         A       +       E L  L   Q 
Sbjct: 25  EKIARKLLKKNPGDGRMLKYLGTVQAIQGKNAEALPRLEQAAGLLPGDAELLKNL--AQN 82

Query: 130 ALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             A  +   A  +   ML I P +    V  L     R  +L+ A+ +A +A ++ P   
Sbjct: 83  LEAMGRDEEAARRYLQMLDISPDSPSIHVR-LAAIFGRAKNLHQARDHARRASELDP-HN 140

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDM 242
           W  +A+++        +RA   L + +K  + + +   +         +      +  + 
Sbjct: 141 W--DALMKL-------ARAHHELEEPQKAKRLYQKVLTMNPEHPPAYSSLGSVCRELNNP 191

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-------IWKVNPHPE- 294
             +      +L+L  +S       A          K   + E+         +++PH E 
Sbjct: 192 EEAREHLQRALELEPDS-------ALHHTRMGSVCKDLKLYEEARDHYLRALEIDPHFEH 244

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
               + N Y HL   +    LK   R  E++ +SV++   +S++
Sbjct: 245 AHSRLGNAYKHLGQIS--DALKSYRRALELDPDSVQAHYGLSEL 286



 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 88/243 (36%), Gaps = 22/243 (9%)

Query: 125 LEVQI-ALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L     AL ++ +  A +    +L+      R         ++ + G    A     +A 
Sbjct: 9   LNAYAEALKKKDFARAEKIARKLLKKNPGDGRMLKYLG-TVQAIQ-GKNAEALPRLEQAA 66

Query: 182 DISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADK 239
            + P    + + + Q    + ++   A  +L              R   +  R+      
Sbjct: 67  GLLPGDAELLKNLAQNLEAMGRDEEAARRYLQMLDISPDSPSIHVRLAAIFGRAKNLH-- 124

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----E 294
                +   A  + +L  ++  A +  A++     + +KA+ + +K+  +NP HP     
Sbjct: 125 ----QARDHARRASELDPHNWDALMKLARAHHELEEPQKAKRLYQKVLTMNPEHPPAYSS 180

Query: 295 IANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + ++   L   E     L+RAL LE    +S      +  +  ++   ++A    + A++
Sbjct: 181 LGSVCRELNNPEEAREHLQRALELE---PDSALHHTRMGSVCKDLKLYEEARDHYLRALE 237

Query: 354 IAP 356
           I P
Sbjct: 238 IDP 240


>gi|238798368|ref|ZP_04641850.1| hypothetical protein ymoll0001_19470 [Yersinia mollaretii ATCC
           43969]
 gi|238717753|gb|EEQ09587.1| hypothetical protein ymoll0001_19470 [Yersinia mollaretii ATCC
           43969]
          Length = 389

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGFYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  Y    +W+ AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLVIYQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  I++ +  K    LE++ +          P + + Y HL
Sbjct: 203 LKKAASADKQCARVSIMLGRVHIAKGEYAKGVEALERVLEQDKEVVSEALPMLNDCYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
          Length = 725

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 23/304 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR 153
                A ++     ++   +      L   +I     Q+  A    +  L+     P T 
Sbjct: 54  GQHQQAVELIQASIREDESNPIPFFNL--GKILAIAGQHENAVGVFQEALKRNQQIPETW 111

Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  +  + R  G    A++    AL ++P        +        E   A     
Sbjct: 112 FC-----FANALREIGKTEEAKQAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEQLFV 166

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +           R    I      A+K +  A+      +L L   S       A +L  
Sbjct: 167 KAVDQYPNNVNLR----INYGRLLAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKE 222

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVES 327
           +    +A     K  +V   P+ A+ Y  L        +    +    +  E+  +  ++
Sbjct: 223 EGDVEEAIASYRKAIEVK--PDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADA 280

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
              +  +  E G +++A A    A+++ P          +      + ++ +   + A+ 
Sbjct: 281 YFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIE 340

Query: 388 AMPD 391
             PD
Sbjct: 341 VKPD 344



 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 12/201 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             + +     +  +Y   AL ++P +P +            +   AI    +  +   ++
Sbjct: 185 LLAEKAEHAAAIMQY-QIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAIEVKPDF 243

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A    A  L   ++GD+  +     +++++  +   A       +  +    +A  
Sbjct: 244 ----ADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIA 299

Query: 282 ILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
              K  +V   P+ A+ Y  L        +    +    +  E+  +  ++   +  +  
Sbjct: 300 SYRKAIEVK--PDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMK 357

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
           E G +++A A    A+++ P 
Sbjct: 358 EEGDVEEAIASYRKAIEVKPD 378



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 53/153 (34%), Gaps = 4/153 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           E     A       +++      A ++L       GD+  A     KA+++ PD      
Sbjct: 257 EGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYF 316

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+        +   AI    +  +   ++    A    A  L   ++GD+  +     ++
Sbjct: 317 ALGLVMKEEGDVEEAIASYRKAIEVKPDF----ADAYFALGLVMKEEGDVEEAIASYRKA 372

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +++  +   A +     L  + +  +A  I+  
Sbjct: 373 IEVKPDFADAYLNLGNVLKEEGEIDEARQIITT 405


>gi|289548835|ref|YP_003473823.1| hypothetical protein Thal_1064 [Thermocrinis albus DSM 14484]
 gi|289182452|gb|ADC89696.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
           14484]
          Length = 538

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 105/287 (36%), Gaps = 21/287 (7%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L Y L  ++ +A+     A E LE  L++  T E    +L       G+L+ A+  
Sbjct: 143 PQNPLPYYLLARLYMAQGDQKKAIEYLEKSLRVKPTFEAGFITLGGLYESRGELSKAETL 202

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARS 233
               L+  P+     E +   Y  +  W  A     +K  +      +    A++LI ++
Sbjct: 203 YKSILEKDPNNRVALERLASLYASSGRWEEAKET-YRKLIDLYPDSGYQYQYALVLI-KA 260

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH- 292
            +  +   +++         K  D+    +      L    +  +A+ + E++ + +P+ 
Sbjct: 261 SQYEEALQVLSELRQ-----KNKDDLQ-VNFTYGVVLELLKRTEEAKKVYEELLQKDPNN 314

Query: 293 ----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +A +Y  L         + A ++ +I+  +   L++++ +  E   +  A    
Sbjct: 315 VRIMERLAGVYADLGDYTKAE--ETAQKVLKIDPSNYNMLLLMAHLLSETNRLQDAFLYV 372

Query: 349 MLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393
             A +I P    ++ + A +        +      + A+     DP 
Sbjct: 373 QKAKEINPNDYRVYFVTAILLDKEGKYLEAEKN-LRKAIELNPEDPD 418



 Score = 60.7 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 98/275 (35%), Gaps = 13/275 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A  M +         +   + LL     +   QY+ A   L+ + ++        
Sbjct: 92  GEQHKA--MSALEEGYRVVPDSPQILLLLADEYMRRSQYDKATPLLQRLSELNPQNPLPY 149

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y L       GD   A  Y  K+L + P        +   Y    E S+A   L +    
Sbjct: 150 YLLARLYMAQGDQKKAIEYLEKSLRVKPTFEAGFITLGGLYESRGELSKA-ETLYKSILE 208

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               NR   + L   +   A  G    +     + + L  +S       A  LI  ++  
Sbjct: 209 KDPNNR---VALERLASLYASSGRWEEAKETYRKLIDLYPDSG-YQYQYALVLIKASQYE 264

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR----LEEINKESVESLVIVSK 333
           +A  +L ++ + N   ++   +T+ +    + + + A +    L + +  +V  +  ++ 
Sbjct: 265 EALQVLSELRQKNKD-DLQVNFTYGVVLELLKRTEEAKKVYEELLQKDPNNVRIMERLAG 323

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQI 367
           +  ++G   +A   A   +KI P    + LL+A +
Sbjct: 324 VYADLGDYTKAEETAQKVLKIDPSNYNMLLLMAHL 358



 Score = 60.3 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 71/201 (35%), Gaps = 9/201 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +      + A + A +     P  P     +   Y +  E  +A++ L +  +   + 
Sbjct: 52  RLAILQKKYDRALQLALEFRKQYPKLPEAYLTLHSVYSVRGEQHKAMSALEEGYRVVPDS 111

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            +    +L+  + E   +     +        +L   + +     A+  ++Q  ++KA  
Sbjct: 112 PQ----ILLLLADEYMRRSQYDKATPLLQRLSELNPQNPLPYYLLARLYMAQGDQKKAIE 167

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALE 337
            LEK  +V P  E   I    L E+    L +A  L +     +  +  +L  ++ +   
Sbjct: 168 YLEKSLRVKPTFEAGFITLGGLYESRGE-LSKAETLYKSILEKDPNNRVALERLASLYAS 226

Query: 338 MGSIDQAHAKAMLAMKIAPRK 358
            G  ++A       + + P  
Sbjct: 227 SGRWEEAKETYRKLIDLYPDS 247


>gi|77920692|ref|YP_358507.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77546775|gb|ABA90337.1| TPR repeat protein [Pelobacter carbinolicus DSM 2380]
          Length = 313

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 17/246 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISP 185
               +     A +     L            L+         GDL ++     +AL ++P
Sbjct: 71  ALYDQGDLPRAIKAFRAALAESREPF---RILFKLGLAQYGLGDLAASVASFKQALQVNP 127

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            +      +   Y+   +  +A   L+   +   ++ R     L    +  + +G+   +
Sbjct: 128 ASAETCYRLGLSYLRQSDLEQARAALDDAIRLNPKYTR----ALFILGMIYSQQGNPTEA 183

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300
                +  +   +   A      +L+   +  +A    EK    +P     H  +     
Sbjct: 184 IRLFRQVEQASPDYTEACFELGMALLRNGELDEAAAQFEKTTVNSPRFTPAHFMLGEA-- 241

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
              +      +    +  E N    E  + +++    +G  D A       + + P    
Sbjct: 242 RRRAGKLSEAISAYRQALEQNPRDTEGWLHLAECQARLGQTDAAREALDKVLSLHPEHHQ 301

Query: 361 FLLLAQ 366
              LA+
Sbjct: 302 AKALAE 307



 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 4/160 (2%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A  L   +++   +G +  +     E+LKL  +   A      +L  Q    +A    
Sbjct: 26  RDARSLHEEAVDLYHRGQVEQALSLWKEALKLEPDFSQAHYYIGLALYDQGDLPRAIKAF 85

Query: 284 EKIWKV--NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                    P   +  +        +    +    +  ++N  S E+   +    L    
Sbjct: 86  RAALAESREPFRILFKLGLAQYGLGDLAASVASFKQALQVNPASAETCYRLGLSYLRQSD 145

Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKIL 379
           ++QA A    A+++ P       +L  I     + T+ I 
Sbjct: 146 LEQARAALDDAIRLNPKYTRALFILGMIYSQQGNPTEAIR 185



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 4/139 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++     N   A ++   V Q    + E    L      L   + + A  + E      
Sbjct: 171 GMIYSQQGNPTEAIRLFRQVEQASPDYTEACFEL--GMALLRNGELDEAAAQFEKTTVNS 228

Query: 151 ATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             R    + +  E+ R  G L+ A     +AL+ +P        + +      +   A  
Sbjct: 229 P-RFTPAHFMLGEARRRAGKLSEAISAYRQALEQNPRDTEGWLHLAECQARLGQTDAARE 287

Query: 210 FLNQKKKNAKEWNRNRAIL 228
            L++      E ++ +A+ 
Sbjct: 288 ALDKVLSLHPEHHQAKALA 306


>gi|34495505|ref|NP_899720.1| protein porphyrin biosynthesis [Chromobacterium violaceum ATCC
           12472]
 gi|34101361|gb|AAQ57730.1| protein porphyrin biosynthesis [Chromobacterium violaceum ATCC
           12472]
          Length = 402

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/387 (11%), Positives = 119/387 (30%), Gaps = 13/387 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   +    + +L +   +  +       +         S  +++ ++   +    ++  
Sbjct: 1   MRFALWITGLFALAVLVGLASTLNTGYAILFLPPYRMEVSFNLMIVLVVALIVVTHIVLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF-HNE 119
           +       P  +     ++       AL    ++        A +  +          N 
Sbjct: 61  LIALAADLPRQVQRFQRQKKLKAARHALREAGIAFFEGRFQKAEREAAKSLGDEYSAENR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA-- 177
            L  L+  + A +    +   E L  + Q+P  R      +     ++ D ++    A  
Sbjct: 121 ALALLIAARAAGSAGDGDKRDEYLNQLDQLP-ARLQLARHMLDAELKLDDKDALGALAAI 179

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIAR 232
            +A  +SP+        ++  +L K+   AI  L +K   A         R R      +
Sbjct: 180 ERARALSPNLTNALRLELKVRLLQKQ-PEAILLLTEKLLKADALEPEQARRYRLAAYQQQ 238

Query: 233 SLENADKGDMIASYHDAIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWKV 289
                 + ++        ++ +        ++A +   +            +  +++   
Sbjct: 239 LAGLLSEREVKEWLRRIPDAERGNPQLLQQVVAHLIKLQEYDYAATLLAGALAGDEMELP 298

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
               E+  +  HL  E  +  LK A    ++       L+ + ++A       +A +   
Sbjct: 299 ELARELGQLAAHLSVEKRLELLKDAENWLKLRPRDHWLLLALGRLAQAQQLWGKAQSYLE 358

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTD 376
            ++ I P       LA++ +A      
Sbjct: 359 ASVSIQPTLCAHAELARLFEATGKEDA 385


>gi|327398313|ref|YP_004339182.1| hypothetical protein Hipma_0143 [Hippea maritima DSM 10411]
 gi|327180942|gb|AEA33123.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima
           DSM 10411]
          Length = 381

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 83/213 (38%), Gaps = 21/213 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G  + A++Y   AL I+P        + + Y  +K+W  A+  +  K+ +  +    
Sbjct: 131 KKAGLYDRAKKYFKDALSINPKNNLAKRLLYEVYEDSKDWENAL--VWHKRFDGVD-KHT 187

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L      +   +G++  +  +  ++LK   + I A +          K  KA  + E
Sbjct: 188 VAHLYTELGKDKLKEGNLEEAKKNFEKALKEHKSCIDALLHLGDIYFQYGKLEKAYDLWE 247

Query: 285 KIWKVNPHPEIANIYTHLLSENTV------GKLKRALRLEEINKESVESLVIVSKIALEM 338
           K+      PE  ++  + + ++ +        L R         ++V  L   ++  L++
Sbjct: 248 KVCITK--PEFCDLALNRIQDDAILENKLKDILNRF-------PDNVFILFFSAEAFLKL 298

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQ 369
              DQ        +     K  F+L  LA+IE+
Sbjct: 299 QK-DQKATSLYKTLLKKGIKSPFILKRLAEIEK 330


>gi|326526657|dbj|BAK00717.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 955

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 92/301 (30%), Gaps = 45/301 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + +   E LE +L+      P      +     E    GD+ +A+    +A   
Sbjct: 587 AAQLE-KSHGTRESLEAILRKAVTYNPKAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 644

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P +  +  A  +      E  RA   L + ++            ++ R L     G++ 
Sbjct: 645 IPISEEIWLAAFKLEFENNEPERARMLLTKARERGGTERVWMKSAIVEREL-----GNVN 699

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTH 301
                  E LKL  +     +   +         KA+ + E   K  P   P   ++ + 
Sbjct: 700 EERRLLEEGLKLFPSFFKLWLMLGQMEDRIGHVPKAKEVYENGLKHCPGCIPLWLSLASL 759

Query: 302 LLSENTVGKLKRALRLEEI-NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
               N + K +  L +    N  + E  +   +  L  G+  +A +    A++  P   I
Sbjct: 760 EERINGLSKSRAFLTMARKKNPATPELWLAAIRAELRHGNKKEADSLLAKALQECPTSGI 819

Query: 361 FLLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMP 390
               A                I++ +                   DK   W   A+   P
Sbjct: 820 LWAAAIEMVPRPQRKSKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAP 879

Query: 391 D 391
           D
Sbjct: 880 D 880


>gi|78185601|ref|YP_378035.1| TPR repeat-containing protein [Synechococcus sp. CC9902]
 gi|78169895|gb|ABB26992.1| TPR repeat [Synechococcus sp. CC9902]
          Length = 605

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 32/243 (13%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  + N A +YA + +   P  P       Q  +  K+   A        + A   +  
Sbjct: 56  LRFNNNNEAIKYAQELITHHPRNPHGYSRYAQALLQQKQPFNANQMALSGLQEAP--HNQ 113

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           + + L + S +  ++ D   S   A + ++   +  M  + AA++L+  NK  +A  I E
Sbjct: 114 QLLALTSESYQALERWD--QSLELANQLIEFHPSLHMGYLKAAQNLLKLNKPNEASSIAE 171

Query: 285 KIWKVNP-HPEI----ANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           +  K  P HP +    +  Y   HL + +    L  A  L E   +S+E     ++  L+
Sbjct: 172 RGLKAKPNHPHLHSIASEAYRARHLHNHS----LNHAKALIENQPDSIEGHKRAAQDLLK 227

Query: 338 MGSIDQA---------HAKAMLAMKIA--------PRKEIFLLLAQIEQANSHNTDKILY 380
           +G  ++A           K+  A  +A              +L  Q+ +AN    D    
Sbjct: 228 LGLRNEAILIIEQLIQRNKSKKAAAMASKLFKVAGQTSRSLVLTTQLAKANDATDDDQRQ 287

Query: 381 WTQ 383
           W  
Sbjct: 288 WIS 290


>gi|117923474|ref|YP_864091.1| tetratricopeptide repeat protein [Magnetococcus sp. MC-1]
 gi|117607230|gb|ABK42685.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 400

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 9/162 (5%)

Query: 133 ERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           + +   A    + +L+ P     TR  A+Y L  +  + G ++ A     + L++ P   
Sbjct: 96  QGELGRAIRMHQNLLERPNLSRETRIAALYGLGEDYRKSGFVDRAVHAYHQTLEVDPGHL 155

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYH 247
               A++  +   K W +A+  L + +K    E  R  A L +    E         S  
Sbjct: 156 KALRALMTLHENEKRWDKALEMLERIRKVTGDEDPRRAAHLRVQIGREQLRHDVAPPSVE 215

Query: 248 DAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           DA      ++++    + A    A+  +       A  +L++
Sbjct: 216 DATRNFERAIEVHPGCVEARRIMAEVALKGGDPGHAVDLLKE 257


>gi|120553958|ref|YP_958309.1| tetratricopeptide repeat protein [Marinobacter aquaeolei VT8]
 gi|120323807|gb|ABM18122.1| TPR domain protein [Marinobacter aquaeolei VT8]
          Length = 390

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 106/312 (33%), Gaps = 38/312 (12%)

Query: 134 RQYNIAHEKLEMMLQIPA---------TREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            + + A    + +L  P          T+E A+     +    G L+ A+    + +   
Sbjct: 84  GETDRAILIHQNLLARPELPARYSPQVTQELAM-----DYLNAGLLDRAEALFHQLMGDR 138

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                   A+++ Y   +EW +A      L +   +   +     I         +   D
Sbjct: 139 EYGRRSAIALIELYQQEREWEKAAQVAKTLTRSDADPATFKALAYITCELSDGALSRNDD 198

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIY 299
              +   A E+L    + + A++   K  I Q   R+A     KI+  NP   PE  +  
Sbjct: 199 RWTAQKLAKEALDYDRSCVRATLLLMKLQIRQGNFREAANQSLKIFDQNPEFGPEAIDRL 258

Query: 300 THLLSE-NTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAP 356
             L  E   V +L    +L ++ ++   + ++++  +          A     + ++  P
Sbjct: 259 MKLEREHGDVSRL--YKKLRKLYEQYPSTSLLLALVESVERSSGRPAAIDLLRMELETRP 316

Query: 357 RKEIFLL---LAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS---VWLPLSP 410
                L    +A  E+  + +  +++      + A   P++       S     WL   P
Sbjct: 317 SVRGLLRLVEMAGYEKGMTTDEGRLVSRIGHLILANR-PVYRCVSCGFSGQQLHWL--CP 373

Query: 411 ISKTLCYFEWKI 422
             K     +W+ 
Sbjct: 374 SCK-----QWET 380


>gi|119357637|ref|YP_912281.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 3035

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 83/249 (33%), Gaps = 19/249 (7%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           +++ V L            + A    +  +LQ P     A+  L   + +  +   A   
Sbjct: 27  HDHAVTLHSALAFHQNGALDEAEALYQAILLQNPE-HFDALQLLATIAAQRNESEKAVAL 85

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +AL+I+PD               + +  A+    +      ++    A   I R    
Sbjct: 86  FDQALNINPDHSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDY----ADAYINRGNVL 141

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +      +     +++ L  +   A      ++++ ++   A    EK   +N  P  A
Sbjct: 142 MELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALN--PCFA 199

Query: 297 NIYTH--------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           + Y +        +  ++ + + K+A+ L     +  E+ +    + + +   + A    
Sbjct: 200 DAYYNKGLALQKLMRYDDALERYKQAIAL---KPDYTEAFLHQGNVFMALQRYENALLSY 256

Query: 349 MLAMKIAPR 357
              + + P 
Sbjct: 257 EHVIALNPD 265



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 83/300 (27%), Gaps = 53/300 (17%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               +AR  H+         NE  V L        E + + A      +L        A+ 
Sbjct: 793  ERSVARPSHAAGRST----NEESVKLQRALTLHQEGRLDEAEALYREILSSSPEHFDALQ 848

Query: 159  SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                 + +  D   A     +A+ I+P  P             + +  A+    +  +  
Sbjct: 849  LSATIAAQRHDSEQALVLFDQAISINPGHPGSRNNRGNALRALQRYEEALDSYEKALQLK 908

Query: 219  KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-----ASICAA------ 267
             ++          R     +      +      ++ +  +        A +  A      
Sbjct: 909  PDY----VDAYTNRGSVLLELKRYEEALASYERAIAIKPDHTEFYSDLAVVLLALKRYEE 964

Query: 268  -----------------------KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                                     L+   +  +A    EK   +N  P+ A  Y++L  
Sbjct: 965  ALATYERVLELRRDDPVVYNNRGNVLLELKRYEEALGSYEKAIALN--PDYAEAYSNL-- 1020

Query: 305  ENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              T   LKR         +   +  +  ++    + +  ++   ++A A    A+ + P 
Sbjct: 1021 GVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPD 1080



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 56/206 (27%), Gaps = 9/206 (4%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               +AR  H+          E  V L        E + + A      +L        A+ 
Sbjct: 1608 ERSVARPSHAAGRSTK----EESVKLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQ 1663

Query: 159  SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                 + +  D  +A     +AL I PD               K +  A+    +     
Sbjct: 1664 LSATIAAQRHDSENALVLFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIAVK 1723

Query: 219  KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             ++          R     +      +      ++ L  +          +L+   +   
Sbjct: 1724 PDFIEP----YSNRGNTLQELKRYEEALACYDSAIALKPDYAEPYYNQGNALLELKRDED 1779

Query: 279  AEVILEKIWKVNPHPE-IANIYTHLL 303
            A    EK   + P  + ++ +  H+ 
Sbjct: 1780 AVRSYEKALALKPDYDFLSGLCLHIR 1805



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 22/219 (10%)

Query: 104  RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            R++      +    NE  V L        E + + A    + +L        A+      
Sbjct: 2254 RRVALPSQMEGLSTNEESVKLQRALKLHQEGRLDEAEAICQEILSSIPEHFDALQLSATI 2313

Query: 164  SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            + +  D   A     +AL I PD               K +  A+    +      ++  
Sbjct: 2314 AAQRHDSEKALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDY-- 2371

Query: 224  NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN----KKRKA 279
                     ++  +++G+ +       E++   D +I      A +  ++     K ++ 
Sbjct: 2372 ---------AMAYSNRGNTLQGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRY 2422

Query: 280  EVILE---KIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
               LE   K   +   P+ A   ++    NT+ +LKR  
Sbjct: 2423 ADALESHDKAIALR--PDYAEACSN--RGNTLQELKRYE 2457



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 53/305 (17%)

Query: 86   KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE----------RQ 135
            +ALY  ++S ++     A ++ + ++ Q   H+     +L  Q                 
Sbjct: 830  EALYREILS-SSPEHFDALQLSATIAAQR--HDSEQALVLFDQAISINPGHPGSRNNRGN 886

Query: 136  YNIAHEKLEMMLQIPATREFAV----------YSLYFESCRIGDLNSAQRYATKALDISP 185
               A ++ E  L     +   +                  +      A     +A+ I P
Sbjct: 887  ALRALQRYEEALDSYE-KALQLKPDYVDAYTNRGSVLLELKR--YEEALASYERAIAIKP 943

Query: 186  DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            D       +    +  K +  A+    +      E  R+  ++   R     +      +
Sbjct: 944  DHTEFYSDLAVVLLALKRYEEALATYERVL----ELRRDDPVVYNNRGNVLLELKRYEEA 999

Query: 246  YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-----KVNPHPEIANIYT 300
                 +++ L  +        A++  +    RK     E+        +   P+ A+ Y 
Sbjct: 1000 LGSYEKAIALNPDY-------AEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYY 1052

Query: 301  HL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +           E  +    RA+ L     + VE         L++   ++A      A+
Sbjct: 1053 NRAVLFYDLDRYEEALASYDRAIVL---KPDFVEVFSNRGNALLKLKRYEEALGSYEKAI 1109

Query: 353  KIAPR 357
             + P 
Sbjct: 1110 ALKPD 1114


>gi|332265872|ref|XP_003281937.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Nomascus leucogenys]
          Length = 1050

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 25/307 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393

Query: 358 KEIFLLL 364
               LLL
Sbjct: 394 FADALLL 400



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 4/174 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A   ++   +    H + L  L    I   +     A       L++      A 
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNL--ANIKREQGNIEEAVRLYRKALEVFPEFAAAH 364

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKK 216
            +L     + G L  A  +  +A+ ISP        + +  +   ++   A+    +  +
Sbjct: 365 SNLASVLQQQGKLQEALMHYKEAIRISPTFADALLLIWENTLKEMQDVQGALQCYTRAIQ 424

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    +  L + S    D G++  +      +LKL  +   A    A  L
Sbjct: 425 INPAFADAHS-NLASISXGTTDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 477



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 74/236 (31%), Gaps = 11/236 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+       N  +V+     +   +   ++A +     +++      A  +L   
Sbjct: 243 RAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANA 302

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A+     AL + P        +            A+    +  +   E+  
Sbjct: 303 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-- 360

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK-SLISQNKKRKAEVI 282
             A      +     +G +  +     E++++      A +   + +L      + A   
Sbjct: 361 --AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADALLLIWENTLKEMQDVQGALQC 418

Query: 283 LEKIWKVNP-----HPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVS 332
             +  ++NP     H  +A+I      S N    +       ++  +  ++   ++
Sbjct: 419 YTRAIQINPAFADAHSNLASISXGTTDSGNIPEAIASYRTALKLKPDFPDAYCNLA 474



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|15236308|ref|NP_192252.1| EMB2770 (EMBRYO DEFECTIVE 2770); RNA splicing factor,
           transesterification mechanism [Arabidopsis thaliana]
 gi|4206197|gb|AAD11585.1| putative pre-mRNA splicing factor [Arabidopsis thaliana]
 gi|7270213|emb|CAB77828.1| putative pre-mRNA splicing factor [Arabidopsis thaliana]
 gi|16604551|gb|AAL24077.1| putative pre-mRNA splicing factor [Arabidopsis thaliana]
 gi|23296408|gb|AAN13111.1| putative pre-mRNA splicing factor [Arabidopsis thaliana]
 gi|332656920|gb|AEE82320.1| pre-mRNA-processing factor 6 [Arabidopsis thaliana]
          Length = 1029

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 96/299 (32%), Gaps = 41/299 (13%)

Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + + + E L+ +L+      P      +     E    GD+ +A+    +A   
Sbjct: 665 AAQLE-KSHGSRESLDALLRKAVTYVPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 722

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--- 240
            P++  +  A  +     KE  RA   L + ++            ++ R L N ++    
Sbjct: 723 IPNSEEIWLAAFKLEFENKEPERARMLLAKARERGGTERVWMKSAIVERELGNVEEERRL 782

Query: 241 --------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                                      +  +       LK C + I   +  A      N
Sbjct: 783 LNEGLKQFPTFFKLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVN 842

Query: 275 KKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332
              KA  IL    K N  P  A ++   + +E      + A  L     ++  +S ++ +
Sbjct: 843 GLNKARAILTTARKKN--PGGAELWLAAIRAELRHDNKREAEHLMSKALQDCPKSGILWA 900

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +EM    +   K++ AMK   R     +            +K   W + A+   PD
Sbjct: 901 -ADIEMAPRPRRKTKSIDAMKKCDRDPHVTIAVAKLFWQDKKVEKARAWFERAVTVGPD 958


>gi|27366254|ref|NP_761782.1| tetratricopeptide repeat-containing protein [Vibrio vulnificus
           CMCP6]
 gi|37679487|ref|NP_934096.1| hypothetical protein VV1303 [Vibrio vulnificus YJ016]
 gi|320156763|ref|YP_004189142.1| heat shock protein YciM [Vibrio vulnificus MO6-24/O]
 gi|27362455|gb|AAO11309.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus
           CMCP6]
 gi|37198231|dbj|BAC94067.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus
           YJ016]
 gi|319932075|gb|ADV86939.1| heat shock (predicted periplasmic) protein YciM precursor [Vibrio
           vulnificus MO6-24/O]
          Length = 389

 Score = 61.1 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 106/344 (30%), Gaps = 69/344 (20%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + +      +  +     + A +  E +++ P  R  
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIEQKNIALQQLAKDYMVSGFLDRAEKIFEQLVEEPEHR-- 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                          ++A                  + V+      +EW +AI + +   
Sbjct: 141 ---------------DAAL----------------QQLVLIYQ-QTREWDKAIHYAHLLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  K+  R   A      ++     G+   S     ++L+     + ASI   +  +   
Sbjct: 169 KTGKKSIRKNIAHYWCELAMLEQADGNKTKSISHFKKALQEDPKCVRASISLGRIYLEME 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           + RK    LE +      +     P +A  Y HL  E+ + +  RA  + +    S E  
Sbjct: 229 EYRKTIEYLEHVLEQDADFVSEALPILAECYHHLGQEDQLVEFLRA-CISKKAGVSAE-- 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQANSHNTDKILYWTQ 383
           ++++++     S+  A       +   P     + L+    A+ E        +      
Sbjct: 286 LMLAQLVAHHESVGAAQELLTRQLIKNPTMKGFYRLMDYHLAEAE------DGRAKESLT 339

Query: 384 SALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
             L AM        P +       S+    W    P  K     
Sbjct: 340 -TLQAMVGEQLKIKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 380


>gi|113476439|ref|YP_722500.1| hypothetical protein Tery_2853 [Trichodesmium erythraeum IMS101]
 gi|110167487|gb|ABG52027.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3172

 Score = 60.7 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 82/233 (35%), Gaps = 11/233 (4%)

Query: 130  ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            AL   +   A       ++I      A YSL         L        K ++I P+   
Sbjct: 1749 ALLPGKLEEAISYYRKAIEIEPYLTEAYYSLANILVNQNQLEKVVILYEKLIEIQPNLWE 1808

Query: 190  VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                +    +  +++S AI+      K     + +   L    +      G++  + +  
Sbjct: 1809 PHHNLGDILIKQEKFSEAISAYGHAIKLNPNSSVSYVKLADILAKV----GELSQAINAY 1864

Query: 250  IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304
             +++ +  + + A      +L ++ +K +A  +  K  ++ P     H ++ +++     
Sbjct: 1865 YKAIAIDPDFVDAYQYLGDALRNKGEKEEAIKVYRKAIEIRPQLWEVHHKLGSLFQETEE 1924

Query: 305  ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              T     R  +  E+N +   S   +  + + +    +A      A+++ P 
Sbjct: 1925 LETAANAYR--KSIELNPDFCWSYNNLGDVLVRLEKWSEATGVYSRAIELNPD 1975



 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 72/239 (30%), Gaps = 30/239 (12%)

Query: 125  LEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY--SLYFESCRIGDLNSAQRYATKAL 181
            L+    + + +   A +     ++  P + E      +L  E  ++ D  +A     +++
Sbjct: 2114 LQGDTLVEKGEKEKAIKVYRKAVEMEPESWEVHHKLGNLLQEIGKLEDAIAAYN---ESI 2170

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++ PD  W    +    V   + + AI    QK    +         L           +
Sbjct: 2171 ELKPDLSWSYNNLGDVLVRLGKLNEAIK-YYQKAIYLEPNFAWSYYNLAELCFLLEKWDE 2229

Query: 242  MIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             + +Y   +E   +  +        +  A     Q K  +A                   
Sbjct: 2230 AVNAYRRFME---IQPDFSPEVEEKLNQALHQQVQGKLEQALSY---------------- 2270

Query: 299  YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y   +  +    +K   +  EI  +  E  + +    +  G  ++A      A+   P 
Sbjct: 2271 YRQGIRNDPTD-VKSYEKALEIKPDDAELYLGLGHAWIAKGQSEKAILAYQKAIDKNPD 2328


>gi|330994519|ref|ZP_08318443.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp.
           SXCC-1]
 gi|329758373|gb|EGG74893.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp.
           SXCC-1]
          Length = 1265

 Score = 60.7 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 98/284 (34%), Gaps = 35/284 (12%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP- 188
           ALA  +   A       +     R  A+  L   + R GD+ +A+R+  +A  ++PD   
Sbjct: 306 ALAHGELEQAERDFSSSMGTDPPRPEALEGLGLVAQRRGDIPAARRWLEQARALAPDDAG 365

Query: 189 -------------WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSL 234
                            A +   V   ++  A   L   +K + +  +  R   +IA + 
Sbjct: 366 IRNALAGLDAPGGDPQLARLWALVARHQYDEAQAMLPAVEKDHGRIADTLRVRAIIAHAR 425

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP- 293
                     +       L+L    + A+   +  LI + +  +AE  + ++ +   +P 
Sbjct: 426 HEL-----PRAEAAWRAVLRLVPGDLPAAAALSDVLIEEGRITEAEGWVARL-RAAHYPG 479

Query: 294 --EIANIYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAHAKA 348
              +       ++EN     +RAL LE+  +++  +    + ++++ L  G   +A A  
Sbjct: 480 VTGLEAGVLGAMAENEPDPARRALLLEQALRDAPHNGWLRLHLAQLWLARGQATRARALM 539

Query: 349 M----LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                L  K     ++    A        +  +          A
Sbjct: 540 APLCNLPPKTDEDTQVCFAFA----LQDQDMPRADALLARLPRA 579



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 27/171 (15%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A     +AL I PD       +    V   + + A   L                
Sbjct: 67  GDDMHALHALQRALRIEPDNLEAGLMLGAVQVHQNDMAGARATLQ--------------- 111

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
              A   +   +  + A      ++         A++  A+S     KK +A ++   ++
Sbjct: 112 ---ALQAQPGAQAQVAALRGWIGQA-----PIDPAALANARSAADTGKKLQATLLYRAVF 163

Query: 288 K-VNPHPEIANIYTHLLSENT---VGKLKRALRLEEINKESVESLVIVSKI 334
           +  +P P++   Y  +LS +        +R   L  +    +E  + +++ 
Sbjct: 164 QGAHPLPDMELEYDRVLSGSLSGYTEATQRLRALGALLPHDLEIRMALAQA 214


>gi|255075311|ref|XP_002501330.1| hypothetical protein MICPUN_57757 [Micromonas sp. RCC299]
 gi|226516594|gb|ACO62588.1| hypothetical protein MICPUN_57757 [Micromonas sp. RCC299]
          Length = 1496

 Score = 60.7 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 84/276 (30%), Gaps = 29/276 (10%)

Query: 127  VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             Q+AL     + A   LE            +++    +   GD+  A++    A + +P 
Sbjct: 1038 AQVALRSGDVSAAQALLEDARTRDGDNVRVLHASAQLAEASGDVEGARKIFAAAAERAPR 1097

Query: 187  APWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             P V  +  +       +   A            E  R      + ++    +       
Sbjct: 1098 DPHVALSRARLQCWKLDDPDGAREIFTAAAAANPENYR------VLQAWAVMESRRPRGG 1151

Query: 246  YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                 +  KL     +A + AA+ L       +A  +    W       +   +     +
Sbjct: 1152 GGKVADYAKLTFEDKVAGMAAARPLFQ-----RAADV--APWATK----VWAAWAQAEFD 1200

Query: 306  NTVGKLKRALRLEEINKESVESLVI----VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             T   + RA  L      S  + V+    + ++        QA      A+ + PR  + 
Sbjct: 1201 ATGD-VDRARELYTRGLASDPTSVVCLRGLGRVERTAERFSQARDYLERALDLEPRNHMC 1259

Query: 362  -LLLAQIEQANSHNTDKILYWT-QSAL----HAMPD 391
               LA IE+ + +      Y+    AL     A  D
Sbjct: 1260 VRELAMIEEKSGNKARAARYFNVAKALVKEEKAARD 1295



 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 20/217 (9%)

Query: 93   MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PA 151
            +++ + ++  A+ +      +   +   L      Q+A A      A +      +  P 
Sbjct: 1040 VALRSGDVSAAQALLEDARTRDGDNVRVLHA--SAQLAEASGDVEGARKIFAAAAERAPR 1097

Query: 152  TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQYVLAKEWSR 206
                A+     +  ++ D + A+   T A   +P+       W      +      + + 
Sbjct: 1098 DPHVALSRARLQCWKLDDPDGAREIFTAAAAANPENYRVLQAWAVMESRRPRGGGGKVAD 1157

Query: 207  -AITFLNQK-----------KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
             A      K           ++ A        +       E    GD+  +       L 
Sbjct: 1158 YAKLTFEDKVAGMAAARPLFQRAADVAPWATKVWAAWAQAEFDATGDVDRARELYTRGLA 1217

Query: 255  LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                S++      +   +  +  +A   LE+   + P
Sbjct: 1218 SDPTSVVCLRGLGRVERTAERFSQARDYLERALDLEP 1254


>gi|301122157|ref|XP_002908805.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099567|gb|EEY57619.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 632

 Score = 60.7 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 83/228 (36%), Gaps = 14/228 (6%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G   +A    + A +  P   W+       +    +   A     ++  +   +    A
Sbjct: 263 AGLYKNALAVISTAFERFPTHKWLVLLGAMAHFKLGDVYEARRA-YRRLIDGGLYVEPSA 321

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               + +    + G+  A+    +E+L+   + + + +  A     + + R A  I EK 
Sbjct: 322 FN--SYAKMEEELGNEDAAVGLYVEALEQHPDHVPSMMSLAILYKRRGRMRNARKIFEKA 379

Query: 287 WKVNPH--PEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGS 340
            +   H  P + + +     E   G+L  A  L      +   +VES   ++++   + +
Sbjct: 380 LENLQHTGPIL-HAFGDF--EEQHGELDNARELYDEATNVQPTTVESWRALARVEARLKN 436

Query: 341 IDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALH 387
            + A +   +A +  P     L+ LA+IEQ N           + AL 
Sbjct: 437 YEAARSALTMASQHVPNDAPLLVELAKIEQRNRRFPA-ARTALEKALK 483



 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 71/257 (27%), Gaps = 57/257 (22%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE----------SCRIGDLNSA 173
           LL             A      ++            LY E             +G+ ++A
Sbjct: 288 LLGAMAHFKLGDVYEARRAYRRLIDG---------GLYVEPSAFNSYAKMEEELGNEDAA 338

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                +AL+  PD      ++   Y        A     +  +N +    +   +L A  
Sbjct: 339 VGLYVEALEQHPDHVPSMMSLAILYKRRGRMRNARKIFEKALENLQ----HTGPILHAFG 394

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                 G++  +     E+  +   ++                        + W+     
Sbjct: 395 DFEEQHGELDNARELYDEATNVQPTTV------------------------ESWRA---- 426

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +A +   L +       + AL +   +       LV ++KI         A      A+
Sbjct: 427 -LARVEARLKNYEAA---RSALTMASQHVPNDAPLLVELAKIEQRNRRFPAARTALEKAL 482

Query: 353 KIA-PRKEIFLLLAQIE 368
           KI      ++ + A +E
Sbjct: 483 KIDSSDAAVWNMRALLE 499


>gi|220935559|ref|YP_002514458.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996869|gb|ACL73471.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 944

 Score = 60.7 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 88/257 (34%), Gaps = 12/257 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           E     A      +L+I      A+  L   + R GD+++A+ +  +A++ +PDA     
Sbjct: 540 EGNQASAERYFNAVLRIEPRHGLAMLGLAESAVRRGDVSTAESWLQRAVEANPDAVLPRL 599

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + +  +     AI+   +    +    R   +L   ++      GD+  +       
Sbjct: 600 WLSRFHAQSGNADAAISTAREAVAASPRDPRALGLLAELQAR----NGDLDGAADTYGML 655

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTV 308
           + +  + +   +  A     Q ++ +A   +    +V P  ++  +       L+     
Sbjct: 656 INVVPDDLTGRLALAGIAAQQGREGEARQHINAALEVAP-RDLRVLEQAGRVELILGQVD 714

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLA 365
             L  A +  E    S    ++ +   +  G  +QA      A ++ P          +A
Sbjct: 715 ASLAYARQARESYPSSPVGWMLEADALVSAGRHEQARDAYARAHRVLPASLSARRLAQMA 774

Query: 366 QIEQANSHNTDKILYWT 382
           +         + +  W 
Sbjct: 775 ERAGDERQALEVLQDWL 791



 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 86/267 (32%), Gaps = 16/267 (5%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            ++  A   LE +        +    A+      +   G+  +A+    +AL  SP  P 
Sbjct: 371 GRHGDAMAVLEPLRAGGQDAESVALLAMIG--RSATVSGEFETAESAFREALAASPGDPA 428

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +   + + +     +  AI  L+   +         A   +         G++  +   A
Sbjct: 429 LRGDLARLHAAQGRYDEAIDQLSALVREG------DAAAELFLVRTLVASGNVALALSQA 482

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSENT 307
               +   +            + Q ++ +    L     V+    P +  +    L E  
Sbjct: 483 RALAERSPDRPEWHTLVGLIQLQQGERTQGRASLINALNVDDAYLPALLALGRLGLEEGN 542

Query: 308 VGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +R    +  I      +++ +++ A+  G +  A +    A++  P   +  L   
Sbjct: 543 QASAERYFNAVLRIEPRHGLAMLGLAESAVRRGDVSTAESWLQRAVEANPDAVLPRLWLS 602

Query: 367 IEQANSHNTDKILYWTQSALHA-MPDP 392
              A S N D  +   + A+ A   DP
Sbjct: 603 RFHAQSGNADAAISTAREAVAASPRDP 629



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 88/266 (33%), Gaps = 43/266 (16%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           +A+ N+ LA    +    + +        LV L+++Q    + +       L   L +  
Sbjct: 470 VASGNVALAL-SQARALAERSPDRPEWHTLVGLIQLQ----QGERTQGRASLINALNVDD 524

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+ +L       G+  SA+RY    L I P        + +  V   + S A ++L
Sbjct: 525 AYLPALLALGRLGLEEGNQASAERYFNAVLRIEPRHGLAMLGLAESAVRRGDVSTAESWL 584

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +   +    R  L    S  +A  G+  A+   A E++        A    A+   
Sbjct: 585 QRAVEANPDAVLPRLWL----SRFHAQSGNADAAISTAREAVAASPRDPRALGLLAELQA 640

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
                  A                A+ Y                 L  +  + +   + +
Sbjct: 641 RNGDLDGA----------------ADTYG---------------MLINVVPDDLTGRLAL 669

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           + IA + G   +A      A+++APR
Sbjct: 670 AGIAAQQGREGEARQHINAALEVAPR 695



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 88/289 (30%), Gaps = 40/289 (13%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
             +    L   Q   A      A  +L  +LQ       A + L   +      ++AQR 
Sbjct: 41  GEDSATRLERAQTLEAAGDVRAAAFELRRILQDDPDHAQARFGLGRLNVLAARGDAAQRE 100

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---------------------------- 208
             +AL++      V   ++   ++ + ++ A+                            
Sbjct: 101 LRRALELGIPGDEVMPWLIDALLIQERFADALSEVSSLLSADNASTARWLLRRVEANLGL 160

Query: 209 ---TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                L+       ++   +A + +A++     +GD  A+ + A ++ +   +    +  
Sbjct: 161 GRYDELSTDLDAIADYGVEQARVWMAQAQFANHQGDSAAALNLARKAARADPDDPRTAFT 220

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE---------IANIYTHLLSENTVGKLKRALR 316
                + Q   ++AE  L +  +               +  +   L    T       + 
Sbjct: 221 HGWLALRQALFQEAESALLESTRAARARANDSDLTRANLLLVEARLGQGKTSEAEAVIVE 280

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           LE +  +  E   +   +A   G+   A       ++  P      LLA
Sbjct: 281 LESLLGDIPELSYLKGLVAYRQGNFGVARDSLRDTLQRRPEHHQARLLA 329



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 81/326 (24%), Gaps = 67/326 (20%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
              + N   A                 L  L E+Q        + A +   M++ +    
Sbjct: 605 HAQSGNADAAISTAREAVAASPRDPRALGLLAELQA--RNGDLDGAADTYGMLINVVPDD 662

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPD---------------------APWVTE 192
                +L   + + G    A+++   AL+++P                        +  +
Sbjct: 663 LTGRLALAGIAAQQGREGEARQHINAALEVAPRDLRVLEQAGRVELILGQVDASLAYARQ 722

Query: 193 AVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRAILLIAR-----SLENADKGDMIA 244
           A          W   + A+    + ++    + R   +L  +      +      GD   
Sbjct: 723 ARESYPSSPVGWMLEADALVSAGRHEQARDAYARAHRVLPASLSARRLAQMAERAGDERQ 782

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKK---------------------------- 276
           +     + L+     + A +  A       ++                            
Sbjct: 783 ALEVLQDWLETSPQDVSAMLNLAMLHQRHGRRNEAEVLYGQVLTFDPDQVAALNNLAWLY 842

Query: 277 -----RKAEVILEKIWKVNPHPEIANIY--THLLSENTVGKLKRALRLEEINKESVESLV 329
                 +A  +  K +++ P    ++ Y    + S +    L       E      E   
Sbjct: 843 HERQDSRALEMARKAYELQPGAATSHTYGWMLVESGDVASGLSLIESAAEAAP-IPEVRY 901

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++      G   +A       +   
Sbjct: 902 RLAVALTRAGDDPRARQVLGQLLGEH 927


>gi|293604319|ref|ZP_06686726.1| hypothetical protein HMPREF0004_2302 [Achromobacter piechaudii ATCC
           43553]
 gi|292817196|gb|EFF76270.1| hypothetical protein HMPREF0004_2302 [Achromobacter piechaudii ATCC
           43553]
          Length = 537

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/369 (13%), Positives = 116/369 (31%), Gaps = 16/369 (4%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           +  +V +         S  + + ++        +   +  + L+ P  +     KR   +
Sbjct: 24  HSGNVLLLVWPWRIGMSLTLAVLLIVATFIVLYVGLRLLAWLLAIPDRVRVWRGKRAQAR 83

Query: 84  GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
            ++ L  G + +      +A K +   + Q        L  L   + A    +++     
Sbjct: 84  DHELLERGWIGLLEGRYAVAEKDLTKLLDQTKVQTRRVLAALSAARAAHGLGEFDRRDRL 143

Query: 143 LEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD-ISP------DAPWVTEAV 194
           L    +   T       L    +    D+   Q  A +AL  ++P              +
Sbjct: 144 LATAQEQAGTDP----GLVEATATVSADMLLDQGRAERALAVLAPLADGGARHLHTMRLL 199

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESL 253
           ++ +         +  L +         R+ A +L+ A             ++    + L
Sbjct: 200 LRAHTALHH-DEQVFTLARGLVRRNALPRSEADVLIDASGAARLRAAAHSDAWRAIWKDL 258

Query: 254 KLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           K  +  +   ++  A +  +  +  +A  +LE    V  +P +   Y    +E    +L 
Sbjct: 259 KAEERLLPDVALAGAAAFEAAGEANEAARVLEAAIAVKFNPALVAAYARCDAEQVSRRLS 318

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           +A    +      + L  +  + L      QA    + ++      +   LL  +    +
Sbjct: 319 KAETWLQQRPTDPDLLTALGMLCLNGQLWGQAERYLLRSLSRRSDAQTHALLGSLYDRLN 378

Query: 373 HNTDKILYW 381
              D + +W
Sbjct: 379 RPADAVRHW 387


>gi|221211569|ref|ZP_03584548.1| putative hemY protein [Burkholderia multivorans CGD1]
 gi|221168930|gb|EEE01398.1| putative hemY protein [Burkholderia multivorans CGD1]
          Length = 395

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 53/397 (13%), Positives = 130/397 (32%), Gaps = 21/397 (5%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S  + +  +         L  
Sbjct: 3   LRGIVWLAVLFAIAVALATVGRFDAGQVLIVYPPYRVDVSLNLFVISVVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARTRNEKAQASLRDAIANLYAGRFSRAEKAAREALAVDANQGAA 122

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            +       A A  + +    + E + ++ A        L     R    ++    A  A
Sbjct: 123 SLV-----AATAAHRMHEYTRRDEWLSKVDAPEWQDARLLATADMRADARDADGALAALA 177

Query: 181 LDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-- 237
              +        +  ++     K W+  +  L +  +  +  +   A+ L  ++ EN   
Sbjct: 178 DLQAGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLR 236

Query: 238 DKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           ++     +  +  +SL    +        +  AA+ L++  ++ +A  I+E     N   
Sbjct: 237 ERRHDADALLEIWQSLSPVERQSPRL---ADLAAELLVALERRTEARRIVEDALAHNWDA 293

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +   Y      + +  +++A   ++ + E  + L  + ++  +     +A +    A+K
Sbjct: 294 RLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLEAALK 353

Query: 354 IAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +A  +         LA++ +          ++ +SAL
Sbjct: 354 LADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|40063060|gb|AAR37916.1| TPR domain protein [uncultured marine bacterium 560]
          Length = 764

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 17/251 (6%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
             + NE L+Y +      A  Q + A +  E  L I      A  +L      +G L +A
Sbjct: 33  KDYPNEPLLYNISGICYKAIGQRDAAVKSFENALAIKQDFADAHNNLGVTLQELGQLEAA 92

Query: 174 QRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            ++  +AL I PD           +Q+     +   A+    +      ++    A    
Sbjct: 93  VKHYEEALAIRPDYAEAHNNFGVTLQEL---GQLEAAVKHYEEALAIRPDY----AEAHN 145

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
              +   + G + A+     +++ +  N   A      +L    +   A    EK   + 
Sbjct: 146 NLGITLKELGQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKSYEKALAIK 205

Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P     H  + N++  L   +T   +K   +   I  +  E    +     E+G +D A 
Sbjct: 206 PNFAEAHNNLGNVFKDLGQLDTA--VKSYEKALAIRPDYAEVHNNLGNALKELGQLDAAF 263

Query: 346 AKAMLAMKIAP 356
                 + I P
Sbjct: 264 NCYEKTLAIKP 274



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 61/198 (30%), Gaps = 11/198 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             IG  ++A +    AL I  D       +        +   A+    +      ++   
Sbjct: 50  KAIGQRDAAVKSFENALAIKQDFADAHNNLGVTLQELGQLEAAVKHYEEALAIRPDY--- 106

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A       +   + G + A+     E+L +  +   A      +L    +   A    +
Sbjct: 107 -AEAHNNFGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNNLGITLKELGQLDAAVESYK 165

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K   + P     H  +      L   +T   +K   +   I     E+   +  +  ++G
Sbjct: 166 KTIVIKPNFAEAHNNLGITLKELGQLDTA--VKSYEKALAIKPNFAEAHNNLGNVFKDLG 223

Query: 340 SIDQAHAKAMLAMKIAPR 357
            +D A      A+ I P 
Sbjct: 224 QLDTAVKSYEKALAIRPD 241



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 56/158 (35%), Gaps = 4/158 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            Q + A E  +  + I      A  +L      +G L++A +   KAL I P+       
Sbjct: 155 GQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKSYEKALAIKPNFAEAHNN 214

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +    +   A+    +      ++        +  +L+    G + A+++   ++L
Sbjct: 215 LGNVFKDLGQLDTAVKSYEKALAIRPDY--AEVHNNLGNALKEL--GQLDAAFNCYEKTL 270

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +      A+      L    +  +A    E+ + + P
Sbjct: 271 AIKPEFAEANYNRGNVLKGLKRLDEALASYERAYILKP 308


>gi|242083614|ref|XP_002442232.1| hypothetical protein SORBIDRAFT_08g016670 [Sorghum bicolor]
 gi|241942925|gb|EES16070.1| hypothetical protein SORBIDRAFT_08g016670 [Sorghum bicolor]
          Length = 963

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 92/301 (30%), Gaps = 45/301 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + +   E L+ +L+      P      + +   E    GD+ +A+    +A   
Sbjct: 595 AAQLE-KSHGTKESLDALLKKAVNYNPRAEVLWLMA-AKEKWLAGDVPAARAILQEAYAA 652

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P++  +  A  +      E  RA   L + ++            ++ R L     G++ 
Sbjct: 653 IPNSEEIWLAAFKLEFENNEPERARMLLAKARERGGTERVWMKSAIVEREL-----GNVG 707

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
                  E LKL  +     +   +         KA+ + E   K  P      +    L
Sbjct: 708 EERRLLEEGLKLFPSFFKLWLMLGQMEDRLGNGAKAKEVFENGLKHCPSCIPLWLSLAGL 767

Query: 304 SENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            E   G  K    L    + N  + E  +   +     G+  +A A    A++  P   I
Sbjct: 768 EEKVSGLSKSRAVLTMARKKNPATPELWLAAIRAESRNGNKKEADALLAKALQECPTSGI 827

Query: 361 FLL----LA-----------QIEQANSHNT---------------DKILYWTQSALHAMP 390
                  +A            I++++                   DK   W   A+   P
Sbjct: 828 LWAEAIEMAPRPQRKGKSTDAIKRSDHDPHVIATVAKLFWLDRKVDKARSWLNRAVTLAP 887

Query: 391 D 391
           D
Sbjct: 888 D 888


>gi|238750672|ref|ZP_04612171.1| hypothetical protein yrohd0001_9270 [Yersinia rohdei ATCC 43380]
 gi|238711062|gb|EEQ03281.1| hypothetical protein yrohd0001_9270 [Yersinia rohdei ATCC 43380]
          Length = 399

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 115/365 (31%), Gaps = 7/365 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L   L  ++++  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVVFLIVEWILRRIFRTGARTRGWFMGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  K     L+ +A  +     K+ +  +         + YLL  + A         +
Sbjct: 81  RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G +++A+    + LD +P  P V       Y+
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDRAPRHPEVLRLAELAYL 198

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN----ADKGDMIASYHDAIESLKL 255
            +  +S  +  L    K     +   A L     +        +           +  + 
Sbjct: 199 RSGAYSSLLEILPAMSKVQLHTSDEIAALEQQAYIGIMNQCMAEEGSDGLKRWWKDQSRK 258

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N I   +   + LI  N    A+ ++    K      +  +   L + N     K   
Sbjct: 259 VRNEIPLQVALVEHLIECNDHDVAQQVILDSLKRQYDERLVLLIPRLQAGNPDPLEKSLR 318

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
           +  + +  +      + ++ L+ G  ++A      A++  P    +  LA          
Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALEQRPDGYDYAWLADALDKLQRPE 378

Query: 376 DKILY 380
           D    
Sbjct: 379 DAAQA 383


>gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
           1-like [Rattus norvegicus]
          Length = 942

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 586 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 645

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 646 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 702 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 756

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     +  + ++++   MG   +A       +   PR  E + L
Sbjct: 757 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H  +K L   + AL     DP
Sbjct: 817 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 845


>gi|94967635|ref|YP_589683.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549685|gb|ABF39609.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 878

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 90/275 (32%), Gaps = 26/275 (9%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                  +   VY+   +I  A  ++++A ++ +  L + A    A+  L       G +
Sbjct: 566 KAVELDDHVPAVYVTLGRIHEAAGEHDLAVQEFQRALALDARSANALNGLAHSQESAGHV 625

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             A+    KA  + PD   V   +   Y    ++  AI  L +  +   + ++    +  
Sbjct: 626 AEAEATFKKAAALRPDYWDVYNEMGLFYDRQSKYKEAIEQLKRAVQLTPDNSQ----VYS 681

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIM---ASICAAKSLISQNKKRKAEVILEKIW 287
             +    D  D      DA ++LK   +      A          + +  +A  +LEK  
Sbjct: 682 NLAAVYIDSADPKL-RGDAEQALKKSIDLSPTYFAYANLGSLYFDEKRYAEAASVLEKAL 740

Query: 288 KVNPHPEIANIYT----------HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           ++N    +  I+              +           +  +       + VI++ ++  
Sbjct: 741 QINGDNYLVWIWLMNSYDWLGEQDKSAAAADKAFGLLSKEAQAKPRDASAQVILADLSAR 800

Query: 338 MGSIDQAHAKAMLAMKIAPR--------KEIFLLL 364
               D+A      A+ +AP            + L+
Sbjct: 801 KKLTDKAMGHLQTALALAPDDPDILADAASAYELM 835


>gi|109472802|ref|XP_342789.3| PREDICTED: transmembrane and tetratricopeptide repeat containing 1
           isoform 2 [Rattus norvegicus]
          Length = 942

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 586 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 645

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 646 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 702 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 756

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     +  + ++++   MG   +A       +   PR  E + L
Sbjct: 757 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H  +K L   + AL     DP
Sbjct: 817 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 845


>gi|285018377|ref|YP_003376088.1| hypothetical protein XALc_1599 [Xanthomonas albilineans GPE PC73]
 gi|283473595|emb|CBA16098.1| hypothetical protein XALc_1599 [Xanthomonas albilineans]
          Length = 392

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 90/303 (29%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   I   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRTDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQIDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             + ++  Y   ++W +AI    + ++   +   +  A      +      G    +   
Sbjct: 148 ALKHLISIYQAERDWEKAIDNATRYEEVTGEPMGKLIAQFECELADRYRASGKPDLARAA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +  +       A    E+  + +P       P +   Y   
Sbjct: 208 IARAYQADAKSVRAGILEGRIDVDDGNNDGAIRAFERAARHDPDYLPEIMPALMECYRRG 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                   L  A        E    +   + ++++         A       +K  P   
Sbjct: 268 ND------LSGARAFLSEMTEHYRGIAPVLALTRLMESQEGASAARTYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L ++  A   ++   L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIELTLAEGADSTATLQDLKHITDQLLVRNPSYRCTRCGFGARTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|301064193|ref|ZP_07204636.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300441638|gb|EFK05960.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 260

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 93/251 (37%), Gaps = 30/251 (11%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATR 153
           I+      A+K  +                   Q   +E     A  + LE     P   
Sbjct: 27  ISCGTDNAAQKKKATTLADL------------GQAMASEGNLRGALQKLLEASKLDPDNA 74

Query: 154 EFAVYSLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           +     +Y +       +GD   + +Y  KAL++ PD P  T  +   Y+L  +W +A+ 
Sbjct: 75  D-----IYQQIALVFRSLGDYRLSLKYFRKALELKPDFPEATNNMGTVYLLMGDWPKAVD 129

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  +N K    + A   +  +    + GD   +  +   S++L  +   A +  AK 
Sbjct: 130 CFKKAAENIKYQTPHYAYNNLGLA--YFNMGDYEKAIQNYEMSIRLSHSYAFAYVNLAKV 187

Query: 270 LISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKESV- 325
             ++    +AEV   +     P  P++   +    +  + T    +  +++ + +  S  
Sbjct: 188 YEAKGNLVEAEVNYREAVLYRPRDPQVLLGFAELLIKEDKTKEAKETLIKIIKEDPRSAA 247

Query: 326 --ESLVIVSKI 334
             E+  +++K+
Sbjct: 248 GTEARKLLAKL 258


>gi|260903512|ref|ZP_05911907.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
 gi|308107607|gb|EFO45147.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
          Length = 391

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 105/343 (30%), Gaps = 65/343 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E +++ P  +E 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPDYKEA 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+  L     +  +   A  YA                                  NQ  
Sbjct: 143 ALQQLVTIYQQTREWEKAIHYA----------------------------------NQLA 168

Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K   + +R R   A      ++ +   G+   +     ++L      + ASI   +  + 
Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRASISLGRIYLE 228

Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
               ++       +LE  K +  +  P IA  Y HL  E+ + +  RA  +++    S E
Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384
             +++ ++     S+  A       +   P  + F  L    I +A      +       
Sbjct: 288 --LMLVQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341

Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418
            L AM        P +       S+    W    P  K     
Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382


>gi|34540924|ref|NP_905403.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
 gi|34397239|gb|AAQ66302.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 337

 Score = 60.3 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 174 QRYATKALDI-------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +    +AL          P          +  +   + SRA+       ++  E    +A
Sbjct: 96  RHLTEEALAQMNLLLEEVPMHTATLLNRAKLRLEQNDPSRALEDCGTGIESTSELE-EQA 154

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L   +    D  ++  +     ++++  D  I A +  A+ LI   +  +A   L+  
Sbjct: 155 LFLYYGASAMKDMKNLKDALCLLKQAIEKNDAFIPARLLRARILIDLERYEEATQDLD-- 212

Query: 287 WKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           W     PE     +      +L       ++    L  ++  + E    ++ + ++ G  
Sbjct: 213 WVAASDPEEEQVPMLRARLFMLEGKQQNAIQAYEELLSLDPFNEEGHCGIATLMIKEGRS 272

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKILYWTQSALHAM 389
            +A      A++  P +   +L+  +I +      +    W      A 
Sbjct: 273 AEAETFLREAIEEMPVQRNLILMLVEILENKGQTQEAA-EWRAKLPEAE 320



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
             E  V +L  ++ + E +   A +  E +L +    E     +     + G    A+ +
Sbjct: 219 PEEEQVPMLRARLFMLEGKQQNAIQAYEELLSLDPFNEEGHCGIATLMIKEGRSAEAETF 278

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
             +A++  P    +   +V+      +   A
Sbjct: 279 LREAIEEMPVQRNLILMLVEILENKGQTQEA 309


>gi|269137473|ref|YP_003294173.1| uncharacterized enzyme of heme biosynthesis [Edwardsiella tarda
           EIB202]
 gi|267983133|gb|ACY82962.1| uncharacterized enzyme of heme biosynthesis [Edwardsiella tarda
           EIB202]
 gi|304557546|gb|ADM40210.1| HemY protein [Edwardsiella tarda FL6-60]
          Length = 399

 Score = 60.3 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 117/391 (29%), Gaps = 21/391 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ML+++  F ++   I    +++ +   V I   +    TS   ++ +L   +     L  
Sbjct: 1   MLKVLLLFIILIAGIVLGPMLAGHQGYVLIQTDSYNIETSVTSLVIMLILLMLVLFALEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R  L   A        R   +  +    GL+ +   +     K+ +  +         
Sbjct: 61  LLRRLLRTGARTRGWFMGRKRTRARRQTRAGLLKLTEGDYGQVEKLLARNADHA--DQPL 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172
           + YLL  + A        A++ LE   +        +  TR              G+ ++
Sbjct: 119 VNYLLAAEAAQQRGDELRANQYLERAAEVAGSDPLPVDITRV-------RLQLARGENHA 171

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAIL 228
           A+      L+ +P  P V     Q Y+    +   +  L    K       +  + +   
Sbjct: 172 ARHGVDALLNYAPRHPEVLRLAEQAYLRTDAFGPLLEILPTLAKQGLHSDDDIEKLQIRA 231

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I    +    G             +   +     +  A+ LI  +    A+ I+    K
Sbjct: 232 YIGLMDQAMANGGSEGLKQWWKAQARKTRHETALQVALAEHLIECDDHGAAQQIVVDGLK 291

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +  +   L S N     K   +    +  S      + ++ +  G   QA    
Sbjct: 292 RRFDERLVQLMPRLKSGNPEQLEKLLQQQIRQHGASALLNSTLGQLLMRHGEWQQAAEAL 351

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             A+K  P    +  LA          +   
Sbjct: 352 RAALKQRPDAYDYAWLADTLDKLHRPEEAAQ 382


>gi|269102379|ref|ZP_06155076.1| putative N-acetylglucosaminyl transferase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268162277|gb|EEZ40773.1| putative N-acetylglucosaminyl transferase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 389

 Score = 60.3 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 88/277 (31%), Gaps = 47/277 (16%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A K+H  +  +   T     L      +  +    ++ A +    +L  P  R+ 
Sbjct: 83  GEVERAIKIHQNLIARPNLTIEQRNLSLQQLAKDYMVAGLFDRAEKIFGQLLDEPDYRKS 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + ++  Y   +EW +AI   +Q  
Sbjct: 143 AL----------------------------------QQLLNIYQRTREWEKAIDMASQLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  +   ++  A      ++      +   +  D  ++L +    + AS+  A+  I   
Sbjct: 169 KMGEAKLKHDIAHYWCELAMIELGAQNPDKAIQDIKKALSVDKQCVRASLMMARIHIQNQ 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           + ++A   LEK+      +     P +   Y    SE+T   LK      E    +   L
Sbjct: 229 EYKQAIKYLEKVIDQDIDFVGEALPLLLECYQATNSESTW--LKYLQLCVERKVGATAEL 286

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLL 364
           ++  +IA        A       ++  P     + L+
Sbjct: 287 MLADEIA-HREGPVMAQTFMTRQLQKNPTMRGFYQLM 322


>gi|218246150|ref|YP_002371521.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 878

 Score = 60.3 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 13/234 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + + + A    +  +Q+      A  +L     + G L  A     KA+ ++P+  
Sbjct: 208 ALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLA 267

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +  +     N   A   +  +L   D+G    +   
Sbjct: 268 EAYNNLGVALSDQGKRDEAIAAYQKAIQLNP--NLAEAYNNLGVALS--DQGKRDEAIAA 323

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             ++++L  N  +A      +L  Q K+ +A    +K  ++N  P  A  Y +L      
Sbjct: 324 YQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLN--PNFALAYNNL-GVALS 380

Query: 309 GKLKRALRLEE------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + KR   +        +N     +   +       G  D+A A    A+++ P
Sbjct: 381 DQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDP 434



 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 84/236 (35%), Gaps = 11/236 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + + A    +Y  A      ++++      A  +L       G L+ A     KA+ ++P
Sbjct: 35  QGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNP 94

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +       +        +   AI    +  +    +    A   +  +L   D+G +  +
Sbjct: 95  NDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNY--ADAYYNLGIALS--DQGKLEEA 150

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS- 304
                ++++L  N   A      +L  Q K  +A    +K  ++N  P  A+ Y +L + 
Sbjct: 151 IAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLN--PNYADAYYNLGNA 208

Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                     +    +  +++     +   +     + G +++A A    A+++ P
Sbjct: 209 LFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264



 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 83/241 (34%), Gaps = 19/241 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + + + A    +  +Q+      A  +L       G  + A     KA+ ++P+  
Sbjct: 412 ALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFA 471

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +  +    +    A+         +D+G    +   
Sbjct: 472 LAYNNLGNALYSQGKREEAIAAYQKAIQLNPNF----ALAYNNLGNALSDQGKRDEAIAA 527

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---- 304
             ++++L  N  +A      +L  Q K  +A    +K  ++N  P  A  Y +L +    
Sbjct: 528 YQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLN--PNFALAYNNLGNALKD 585

Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLAMKIA 355
                  +   ++AL L E    +  +   ++   L       G +++A  +   A+KI 
Sbjct: 586 QGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQGKLEEALREYEAALKID 645

Query: 356 P 356
           P
Sbjct: 646 P 646


>gi|268319591|ref|YP_003293247.1| TPR repeat-containing protein [Lactobacillus johnsonii FI9785]
 gi|262397966|emb|CAX66980.1| TPR repeat-containing protein [Lactobacillus johnsonii FI9785]
          Length = 419

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 93/253 (36%), Gaps = 10/253 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A +
Sbjct: 62  FPKEDLFKVYLAEILLNDGDEDDGLQLLYDVKPDSDAYLESLLDLADYYQSNGLIETAHQ 121

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  ++P    +   + +   L+ ++S A+    +  KN K +     ++L  R   
Sbjct: 122 KLLEAHKLAPSEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFGE---VVLSQRIAA 178

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              K        + I+S +    SI A   A   ++S N  + A   L+++ +  P    
Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 238

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A      
Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296

Query: 351 AMKIAPRKEIFLL 363
            +++AP      L
Sbjct: 297 GLEVAPDNSDLRL 309



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 69/191 (36%), Gaps = 15/191 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +       +E  +     ++      Y+ A +    + +   T     +     S R
Sbjct: 121 QKLLEAHKLAPSEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT-----FGEVVLSQR 175

Query: 167 IGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE 220
           I    +      +A +            +A+ +     + A +   AI +L+Q  +   +
Sbjct: 176 IAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPD 235

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +     +L  A + E+ ++ +++ +    +   +L +         AK+  + N+  +AE
Sbjct: 236 YVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLDEAE 291

Query: 281 VILEKIWKVNP 291
            +L+K  +V P
Sbjct: 292 RLLKKGLEVAP 302


>gi|158521286|ref|YP_001529156.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158510112|gb|ABW67079.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 879

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 88/276 (31%), Gaps = 16/276 (5%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATR---EFAVYSLYFESC 165
            +      +         +    +  +  A      +L+  P         V+       
Sbjct: 448 AATLKMGLDYPETRFNLARTLFYKGDHEAAIRYYTDLLENSPEISPKLLVDVHYDMAMIL 507

Query: 166 RIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              D   +A+ +   AL++ P  P     +      A+++ +AI   ++      ++   
Sbjct: 508 VHRDQIEAAETHLRAALELKPFFPEGYNDLGVLLRRAEQFDKAIDAFSEALAMKPDYAEA 567

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVI 282
           R   L     ++      +  Y+  +       + + ASI          +++   A+  
Sbjct: 568 R-YNLAQVLYDSGQAEKAMVHYNFLVHDETTGPDLL-ASIHNDLGVIYTRRHELEVAKDH 625

Query: 283 LEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L +   + P     H  +  +      ++T   L+   R   ++ +  E+   ++ ++ E
Sbjct: 626 LSRALCLAPDSPMFHNNLGLLMIKAGRKSTA--LESFSRAVVLDPDYAEARYQLALLSAE 683

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
            G    A +     +  AP  +   LLA +     +
Sbjct: 684 TGDTAAAVSHYNYILSNAPAADNVNLLADVYNGMGN 719



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 26/279 (9%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPAT--REFAVYS--LYFESCRIGDLNSAQRYATKALD 182
            Q+     Q   A      ++    T     A     L     R  +L  A+ + ++AL 
Sbjct: 572 AQVLYDSGQAEKAMVHYNFLVHDETTGPDLLASIHNDLGVIYTRRHELEVAKDHLSRALC 631

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++PD+P     +    + A   S A+   ++      ++   R       +L +A+ GD 
Sbjct: 632 LAPDSPMFHNNLGLLMIKAGRKSTALESFSRAVVLDPDYAEAR----YQLALLSAETGDT 687

Query: 243 IASYHDAIESLKLCDNSIMASICA------AKSLISQNKKRKAEVILEKIWKVNP----- 291
            A+       L     +   ++ A            QN+ +KA    +    + P     
Sbjct: 688 AAAVSHYNYILSNAPAADNVNLLADVYNGMGNIYAEQNQTKKAIYYFKHALALKPDFAEV 747

Query: 292 HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           H  +A     L   +  +    RA     I     E+   +       G+ D+A      
Sbjct: 748 HNNMALTLLSLNRRQKAIDHFTRA---LAIQPGFTEAANSLVLTYSAAGAYDKALTVLKN 804

Query: 351 AMKIAPR--KEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +  AP     I   +A I  +   + +    W   A+ 
Sbjct: 805 LLAAAPDSAASISYNIACI-HSIRGDLENAATWLNRAID 842



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 30/214 (14%)

Query: 133 ERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD----- 186
             + + A E     ++  P   E   Y L   S   GD  +A  +    L  +P      
Sbjct: 650 AGRKSTALESFSRAVVLDPDYAEA-RYQLALLSAETGDTAAAVSHYNYILSNAPAADNVN 708

Query: 187 -APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
               V   +   Y    +  +AI +         ++    A +    +L          +
Sbjct: 709 LLADVYNGMGNIYAEQNQTKKAIYYFKHALALKPDF----AEVHNNMALTLLSLNRRQKA 764

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IY 299
                 +L +      A+     +  +     KA  +L+ +      P+ A         
Sbjct: 765 IDHFTRALAIQPGFTEAANSLVLTYSAAGAYDKALTVLKNLLAAA--PDSAASISYNIAC 822

Query: 300 THLLSEN----------TVGKLKRALRLEEINKE 323
            H +  +           + +  R  RL E + +
Sbjct: 823 IHSIRGDLENAATWLNRAIDRGLRLQRLLETDPD 856



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 10/137 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE------VQIALAERQYNIAHEKLE 144
            L+S    +   A   ++Y+       +   V LL         I   + Q   A    +
Sbjct: 678 ALLSAETGDTAAAVSHYNYILSNAPAADN--VNLLADVYNGMGNIYAEQNQTKKAIYYFK 735

Query: 145 -MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P   E    ++      +     A  + T+AL I P       ++V  Y  A  
Sbjct: 736 HALALKPDFAEV-HNNMALTLLSLNRRQKAIDHFTRALAIQPGFTEAANSLVLTYSAAGA 794

Query: 204 WSRAITFLNQKKKNAKE 220
           + +A+T L      A +
Sbjct: 795 YDKALTVLKNLLAAAPD 811


>gi|238650779|ref|YP_002916634.1| hypothetical protein RPR_04595 [Rickettsia peacockii str. Rustic]
 gi|238624877|gb|ACR47583.1| hypothetical protein RPR_04595 [Rickettsia peacockii str. Rustic]
          Length = 334

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 85/262 (32%), Gaps = 15/262 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+   F  +  +   V I+  +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGFTFIESFDSKVFISLYDYNIETTLFFSLILGLLLLISCFIVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                +  P+ + ++  KR  +    AL   +++ A     +  K  S    +    +E 
Sbjct: 61  FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFA--EYIMNNKATSASIARKNLSSED 115

Query: 121 LV------YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           L        L+           +      + ++       +   +L            A+
Sbjct: 116 LKDSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEKAE 172

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARS 233
            YATKA + +         +++ Y     W++ I   N+  K +  E     A   +  +
Sbjct: 173 NYATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAA 232

Query: 234 LENADKGDMIASYHDAIESLKL 255
            +  +  +   +      ++ L
Sbjct: 233 KQEVESNNTANAIDYLATAVDL 254


>gi|220907898|ref|YP_002483209.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 689

 Score = 59.9 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 80/243 (32%), Gaps = 14/243 (5%)

Query: 121 LVYLLEVQIAL--AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           L  LL  Q        +   A +  + +LQ    +  A+  L   + + GD+ +A  Y  
Sbjct: 4   LQKLLT-QAYRHYQAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFR 62

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +A+ ++P    +   +        +   AI    Q  K     NRN           +  
Sbjct: 63  QAVQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALK----LNRNHLAACYNLGELHLQ 118

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HP 293
           +G+   +      +++L  +  +A      +L  Q   + A     +  ++ P     H 
Sbjct: 119 RGEYAGAIPCFQWAIQLQPDLSLAHYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHC 178

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            + + Y  L        +       ++  +   +L  +         + +A A     ++
Sbjct: 179 NLGSAYLDLGQLEAA--ITAFQSALQLQPDHTGALFNLGLARQTQQQMREAIACYEKVIQ 236

Query: 354 IAP 356
           + P
Sbjct: 237 LEP 239



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 6/182 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A        Q    H   L  L   +    ++Q   A    E ++Q+        
Sbjct: 188 GQLEAAITAFQSALQLQPDHTGALFNLGLAR--QTQQQMREAIACYEKVIQLEPQNSEVY 245

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L      +G    A      A  + PD   +   + +  +   +W+ A        ++
Sbjct: 246 NNLGNAYLAVGQPERAIDVFRWATALKPDDLTLWYNLGKTLLEQADWTGAAACF----RH 301

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               N   + + +        +GD+ A+     ++LKL    + A    A +L+   +  
Sbjct: 302 VLALNPQLSYIHVLLGSALVGQGDLPAASAAYQQALKLDPELVAAHHGIASALLESGEVD 361

Query: 278 KA 279
            A
Sbjct: 362 AA 363



 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 68/250 (27%), Gaps = 17/250 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREF 155
            +   A     Y+       +  + +       L   Q   A    +  LQ+    T   
Sbjct: 154 GDPKAAVSC--YLQALQLQPDLVVAHCNLGSAYLDLGQLEAAITAFQSALQLQPDHTGAL 211

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               L  ++ +   +  A     K + + P    V   +   Y+   +  RAI       
Sbjct: 212 FNLGLARQTQQQ--MREAIACYEKVIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFRWAT 269

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               +       L         ++ D   +       L L        +    +L+ Q  
Sbjct: 270 ALKPD----DLTLWYNLGKTLLEQADWTGAAACFRHVLALNPQLSYIHVLLGSALVGQGD 325

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              A    ++  K++P     H  IA+        +    L     L  +  ++ E  + 
Sbjct: 326 LPAASAAYQQALKLDPELVAAHHGIASALLESGEVDAA--LLHYNHLCHLQPDNAEFSLN 383

Query: 331 VSKIALEMGS 340
            +   L  G 
Sbjct: 384 RATALLLKGD 393


>gi|28868247|ref|NP_790866.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851484|gb|AAO54561.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 1230

 Score = 59.9 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 98/319 (30%), Gaps = 60/319 (18%)

Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156
            A +       ++   N  L   L E +   A+ Q   A   L +   Q P     R   
Sbjct: 266 RATRQQGGARWKNALENVQLWTSLQEARDLQAKGQTGKAQALLAQAQRQNPDNIDVRLT- 324

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213
              L     + G L++AQ    + L      P     ++       +   A+  L+    
Sbjct: 325 ---LADVQVQAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 381

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++    +  R +A+     +     +GD+ A+     +++K   +++      A+  + 
Sbjct: 382 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQVALKDAVKNDPDNVWTRFDLARLYLK 441

Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298
            ++  KA  +++++ K  P                                   P++  +
Sbjct: 442 TDEAPKARALIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFTRIPVDQRTPDMKAL 501

Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
              +                     L    RL+ +   S E  + ++   ++ G   +  
Sbjct: 502 ADEVTMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLASAYIDAGEPARGR 561

Query: 346 AKAMLAMKIAPRKEIFLLL 364
             A  A+  AP     L+L
Sbjct: 562 EMARAAIAQAPLPSADLML 580



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 92/298 (30%), Gaps = 62/298 (20%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLY 161
           R+ H+  +      +  +   L+    L +  +  A E     L+I            + 
Sbjct: 194 RQQHASGAASGWQQDPLVARGLKA---LEKNDHVAAEEAFAARLKIKADDANVLGGLGVV 250

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPW--------VTEAVVQQY--VLAKEWSRAITFL 211
            +      L  A++  T+A      A W        +  ++ +        +  +A   L
Sbjct: 251 RQQQNR--LPEAEQLLTRATRQQGGARWKNALENVQLWTSLQEARDLQAKGQTGKAQALL 308

Query: 212 NQKKKNAKE--------------WNRNRAILLIARSLENADKGDM---------IASYHD 248
            Q ++   +                +  A     R +    +G+          +A    
Sbjct: 309 AQAQRQNPDNIDVRLTLADVQVQAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQ 368

Query: 249 AIESLKLCDNSIMA---------------SICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           A E+L+L D                    S   A+    +   R A+V L+   K +P  
Sbjct: 369 ADEALRLLDTLSPGEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQVALKDAVKNDPDN 428

Query: 294 -----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                ++A +Y  L ++           L +    ++++L   + +++EMG    A  
Sbjct: 429 VWTRFDLARLY--LKTDEAPKARALIDELLKAQPNNIDALYTSALLSVEMGQWQDAQT 484


>gi|297569750|ref|YP_003691094.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925665|gb|ADH86475.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 787

 Score = 59.9 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 97/276 (35%), Gaps = 12/276 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  L++ ++ + E + + A   L  +++         Y         G+   + +   K
Sbjct: 360 PLGSLVQARLLVNEGKNDEAITILSRLVRDHPRWGEPFYVKAQAHFNKGENELSHQDVEK 419

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P        + Q     ++   A        +     N  RA +++ +  +  ++
Sbjct: 420 AVRLIPRHAGARTLLAQHLFQQRDLDGARNEALVALQLQP--NNFRAAIILGQVFQRNNE 477

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIAN 297
            D   +         L  +++        + +++ + R+A  I E+I    P   P +A+
Sbjct: 478 LD--EALQLFTRMNSLLPDNLEVLHNLGVTHLARQEHREAATIFEEILSKRPDFTPALAS 535

Query: 298 IYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +    +   +    ++R     E      +  +++ ++ L     D A      A ++ P
Sbjct: 536 LVAIKMQQRDLDAAIERVTAQIEKAPNQADYRLLLGELHLAGNDFDAAITALRQAQELDP 595

Query: 357 RK-EIFLLLAQI-EQANSHNTDKILYWTQSALHAMP 390
                +LL+A++  +    +     Y    AL A  
Sbjct: 596 AALRPYLLIARLMTETGRTDEAIAEY---RALLAKR 628



 Score = 40.3 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 13/273 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +A      A  +   +  +       L  L+   I + +R  + A E++   ++  
Sbjct: 503 GVTHLARQEHREAATIFEEILSKRPDFTPALASLVA--IKMQQRDLDAAIERVTAQIEKA 560

Query: 151 ATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             +      L  E      D ++A     +A ++ P A      + +          AI 
Sbjct: 561 PNQ-ADYRLLLGELHLAGNDFDAAITALRQAQELDPAALRPYLLIARLMTETGRTDEAIA 619

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                     E    R  L    ++    KGD   +     E L    N   A+   A  
Sbjct: 620 EYRALLAKRPELTPARMNL----AVLLQQKGDDAGAMAAYREILARAPNFAPAANNLAWL 675

Query: 270 LISQNKK--RKAEVILEKIWKVNPH-PEIANI--YTHLLSENTVGKLKRALRLEEINKES 324
           L  + K     A  +     +  P  P +A+     H L  +    +++  +      ++
Sbjct: 676 LAHEPKPDLGAALRLAMLAKEQAPTDPYVADTLGLIHYLRGSHDLAIRQLSQAAAALPDN 735

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                 +++     G+  +A  +    +++   
Sbjct: 736 PTIGYHLARALRAAGNKKEAEEELQRTLQLDND 768



 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 84/271 (30%), Gaps = 19/271 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184
           + Q    + +  ++H+ +E        R     +L  +   +  DL+ A+  A  AL + 
Sbjct: 400 KAQAHFNKGENELSHQDVEK-AVRLIPRHAGARTLLAQHLFQQRDLDGARNEALVALQLQ 458

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGD 241
           P+       + Q +    E   A+    +      +  E   N  +  +AR        +
Sbjct: 459 PNNFRAAIILGQVFQRNNELDEALQLFTRMNSLLPDNLEVLHNLGVTHLARQ-------E 511

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANI 298
              +     E L    +   A        + Q     A   +    +  P+     +   
Sbjct: 512 HREAATIFEEILSKRPDFTPALASLVAIKMQQRDLDAAIERVTAQIEKAPNQADYRLLLG 571

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             HL   +    +    + +E++  ++   ++++++  E G  D+A A+    +   P  
Sbjct: 572 ELHLAGNDFDAAITALRQAQELDPAALRPYLLIARLMTETGRTDEAIAEYRALLAKRPEL 631

Query: 359 EIFLLLAQIEQANSHNTDKI----LYWTQSA 385
               +   +      +              A
Sbjct: 632 TPARMNLAVLLQQKGDDAGAMAAYREILARA 662



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 92/267 (34%), Gaps = 10/267 (3%)

Query: 106 MHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
             + V +Q    +  L  ++LL+ QI LA +Q   A   L+  L +P        +L   
Sbjct: 174 RAAAVVEQALASHPELDRLHLLQSQIYLARQQPAAAEAALQKALALPPADIGKHRALASF 233

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
                  N A+    +A    PD+P     +   Y   +E  +  T        A     
Sbjct: 234 YLNQNQANKAEAQLRQAAAAFPDSPAPHLDLAVIYAQRQELDKVETSFADALAAAP---- 289

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +   + +       ++G +  +     E+L   +         A    +Q +  +A  ++
Sbjct: 290 HNPDIYLRLGAFYREQGRLEQAEAAYQEALTKTEAKADIRAQLADLYFNQRQTEQAAALV 349

Query: 284 EKIWKVN-PHP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           E++ + N  HP   +      +        +    RL   +    E   + ++     G 
Sbjct: 350 EQVLQENRRHPLGSLVQARLLVNEGKNDEAITILSRLVRDHPRWGEPFYVKAQAHFNKGE 409

Query: 341 IDQAHAKAMLAMKIAPR-KEIFLLLAQ 366
            + +H     A+++ PR      LLAQ
Sbjct: 410 NELSHQDVEKAVRLIPRHAGARTLLAQ 436


>gi|188994776|ref|YP_001929028.1| hypothetical protein PGN_0912 [Porphyromonas gingivalis ATCC 33277]
 gi|188594456|dbj|BAG33431.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 333

 Score = 59.9 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 174 QRYATKALDI-------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +    +AL          P          +  +   + SRA+       ++  E    +A
Sbjct: 92  RHLTEEALAQMNLLLEEVPMHTATLLNRAKLRLEQNDPSRALEDCGTGIESTSELE-EQA 150

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L   +    D  ++  +     ++++  D  I A +  A+ LI   +  +A   L+  
Sbjct: 151 LFLYYGASAMKDMKNLKDALCLLKQAIEKNDAFIPARLLRARMLIDLERYEEATQDLD-- 208

Query: 287 WKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           W     PE     +      +L       ++    L  ++  + E    ++ + ++ G  
Sbjct: 209 WVAASDPEEEQVPMLRARLFMLEGKQQNAMQAYEELLSLDPFNEEGHCGIATLMIKEGRS 268

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKILYWTQSALHAM 389
            +A      A++  P +   +L+  +I +      +    W      A 
Sbjct: 269 AEAETFLREAIEEMPVQRNLILMLVEILENKGQTQEAA-EWRAKLPEAE 316


>gi|157828589|ref|YP_001494831.1| hypothetical protein A1G_04045 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933303|ref|YP_001650092.1| tetratricopeptide repeat family protein [Rickettsia rickettsii str.
           Iowa]
 gi|157801070|gb|ABV76323.1| hypothetical protein A1G_04045 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908390|gb|ABY72686.1| tetratricopeptide repeat family protein [Rickettsia rickettsii str.
           Iowa]
          Length = 334

 Score = 59.9 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 85/260 (32%), Gaps = 11/260 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+   F  +  +   V I+  +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGFTFIESFDSKVFISLYDYNIETNLFFSLILGLLLLISCFIVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116
                +  P+ + ++  KR  + G  AL   +++ A     +    A      +S +   
Sbjct: 61  FLILIIDLPSKIHNIFSKRKINHGRYAL---ILAFAEYIMNNKAKSASIARKNLSSEDLK 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    L+           +      + ++       +   +L            A+ Y
Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEKAENY 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235
           ATKA + +         +++ Y     W++ I   N+  K +  E     A   +    +
Sbjct: 175 ATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAVKQ 234

Query: 236 NADKGDMIASYHDAIESLKL 255
             +  +   +      ++ L
Sbjct: 235 EIESNNTANAIDYLATAVDL 254


>gi|118082951|ref|XP_416374.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 944

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 82/270 (30%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A +     LQ+      A+++L       G    A      ++   PD     
Sbjct: 588 LTKDVVEAKDYYRRALQLNPQHNRALFNLGNLLKSQGKKEEAVILLRDSIKYGPDFADAY 647

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       +    A        +N  E +     L     +   D G    +     +
Sbjct: 648 SSLASLLAEQERLKEAEEVYKAGIENCPESSD----LHNNYGVFLVDTGAPERAVSHYRQ 703

Query: 252 SLKLCDNSIMASICAAKSLISQNKKR-------KAEVILEKIWKVNPHPEIANIYTHLLS 304
           ++ L     +A +   +   S  + +       +A  +  K   ++P   +  +Y +  +
Sbjct: 704 AIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVSRKAEILSP---LGALYYN--T 758

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLL 363
                 L+       +   + E+ + ++++   MG   +A       +       E + L
Sbjct: 759 GRYEEALQVYREAASLQPSNKETRLALAQVLAMMGRTKEAEKMTNHVLDEDVECLECYRL 818

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H   K L     AL     DP
Sbjct: 819 LSAIYSKQEH-YAKALEAIDKALQLKPKDP 847



 Score = 43.4 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 14/165 (8%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L  LL  Q      +   A E  +  ++    ++     Y ++      G    A  + 
Sbjct: 649 SLASLLAEQ-----ERLKEAEEVYKAGIENCPESSDLHNNYGVFL--VDTGAPERAVSHY 701

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+ +SP        + + +    +   A  +  +  K +      +A +L        
Sbjct: 702 RQAIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVS-----RKAEILSPLGALYY 756

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           + G    +     E+  L  ++    +  A+ L    + ++AE +
Sbjct: 757 NTGRYEEALQVYREAASLQPSNKETRLALAQVLAMMGRTKEAEKM 801


>gi|302039090|ref|YP_003799412.1| hypothetical protein NIDE3812 [Candidatus Nitrospira defluvii]
 gi|300607154|emb|CBK43487.1| conserved protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 723

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 100/272 (36%), Gaps = 20/272 (7%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA 151
           +++ A  +  A  +    ++        L+ L    I  A+++   A E  E  +   P+
Sbjct: 139 LALGADRVSDAIGLLKQAAELDPTMVRPLLAL--ANIYFAQQELRQAAEWYERALKVAPS 196

Query: 152 TREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           + +  V    +  +   G     ++   KA+++SPD   V   +  +YV       A   
Sbjct: 197 SADVRVARGHFLFA--TGTPEEGRKEFQKAVELSPDQEHVRLVLADRYVALGRRDGAERE 254

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L+    +       +A+  +  +     +   + S    +E+ +      +      +  
Sbjct: 255 LSGLVADMNSHKARKALAELKLAAGQVAETKPVVS--AILEADEHDP---VGIYLKGRIA 309

Query: 271 ISQNKKRKAEVILEK-----IWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKES 324
           +++N   +A  + E+          PH  +          ++    L+ A+RL     ++
Sbjct: 310 LAENDVPQAVGLFEESIGRNATLSGPHLYLGLARLAQGRVDSAQEALREAIRL---QPDN 366

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             + + ++K+ L      +A  +A  A+++ P
Sbjct: 367 EAAHLTLAKLYLAQQKQAEAEKEAWQALRLNP 398



 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 12/252 (4%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
           Y +      +   ++    + A      +     L  ++Q+  T   A +SL       G
Sbjct: 51  YKNAARATPDNPAIHWKLAKAASQVGDPSTIFTSLSRVVQLDPTDFDAQWSLGDFYLAAG 110

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             + A + A   L   P             + A   S AI  L Q  +      R     
Sbjct: 111 KTDEAAKLAESLLAARPQHSAGYLLRAGLALGADRVSDAIGLLKQAAELDPTMVRP---- 166

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+A +     + ++  +      +LK+  +S    +     L +     +     +K  +
Sbjct: 167 LLALANIYFAQQELRQAAEWYERALKVAPSSADVRVARGHFLFATGTPEEGRKEFQKAVE 226

Query: 289 VNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           ++P  E     +A+ Y  L   +   +      L        ++   ++++ L  G + +
Sbjct: 227 LSPDQEHVRLVLADRYVALGRRDGAER--ELSGLVADMNSH-KARKALAELKLAAGQVAE 283

Query: 344 AHAKAMLAMKIA 355
                   ++  
Sbjct: 284 TKPVVSAILEAD 295



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 88/302 (29%), Gaps = 25/302 (8%)

Query: 74  HMLHKRNYDKGYKALYTGLMS-IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV----- 127
             +     D   + L  GL++ + +H    A       + Q       +  +LE      
Sbjct: 241 RYVALGRRDGAERELS-GLVADMNSHKARKALAELKLAAGQVAETKPVVSAILEADEHDP 299

Query: 128 -------QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                  +IALAE     A    E  +   AT       L       G ++SAQ    +A
Sbjct: 300 VGIYLKGRIALAENDVPQAVGLFEESIGRNATLSGPHLYLGLARLAQGRVDSAQEALREA 359

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + PD       + + Y+  ++ + A     Q  +         A +L   +       
Sbjct: 360 IRLQPDNEAAHLTLAKLYLAQQKQAEAEKEAWQALRLNPA--NLEAAVLYGDAFVLGKNW 417

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEI 295
                 + AI  ++      +  +  A     Q +  +A  +  +     P+      + 
Sbjct: 418 AKADEVYGAI--VRQFPGQPIGYVKMATLRKVQGQSAEAAQLFSQALSYAPNDLVILQDY 475

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                    E     +                  +  ++ +     DQA      A+++A
Sbjct: 476 LVALVESKQEPRADAV--LKEYLSKASRDPNLWRLAGRLYVSQRKTDQAEKAFKKALELA 533

Query: 356 PR 357
           P 
Sbjct: 534 PD 535



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 5/175 (2%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E    RA    +R      +     +  +   + +   ++       AK+          
Sbjct: 22  EAPSERAAKHESRGDGYVQQEKFREAVIEYKNAARATPDNPAIHWKLAKAASQVGDPSTI 81

Query: 280 EVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
              L ++ +++P    A       +L +  T    K A  L     +     ++ + +AL
Sbjct: 82  FTSLSRVVQLDPTDFDAQWSLGDFYLAAGKTDEAAKLAESLLAARPQHSAGYLLRAGLAL 141

Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               +  A      A ++ P      L LA I  A      +   W + AL   P
Sbjct: 142 GADRVSDAIGLLKQAAELDPTMVRPLLALANIYFAQ-QELRQAAEWYERALKVAP 195


>gi|301117834|ref|XP_002906645.1| Mitochondrial Protein Translocase (MPT) Family [Phytophthora
            infestans T30-4]
 gi|262107994|gb|EEY66046.1| Mitochondrial Protein Translocase (MPT) Family [Phytophthora
            infestans T30-4]
          Length = 1104

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 93/274 (33%), Gaps = 22/274 (8%)

Query: 102  LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAVY 158
            +A+ M +      T  +  L + L   +       + A E +   L++  T         
Sbjct: 818  VAKDMEAEG---LTVEDRALAFNLHASLLYVVGDVHTAIEAINKSLELQPTLVNSLVKKG 874

Query: 159  SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                E   +G+ + A    ++A+++  +   V   + Q  +L   + +A   L +    +
Sbjct: 875  GFLAE---LGETDEATSCFSEAMELDSNEADVHLHLGQMELLDGNYYKAAQCLRRCISRS 931

Query: 219  KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                    +  ++  +     G    +     E+ K+   S    +   + L  Q     
Sbjct: 932  DALP----VTHVSYGMALYKSGSTYQAKDVFEEASKMFPKSAEVHLFYGEVLADQGNYAN 987

Query: 279  AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            A       W+++P    P +     ++ + + +  +    +  E++     + + ++++ 
Sbjct: 988  AMRHFLTAWELSPQCPLPFLNAGRVYVGTNDPMRAIAHFKQALEVDPRCSSAHLDIAQVL 1047

Query: 336  LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
               G  D+A     +A            L ++E+
Sbjct: 1048 FAQGRTDEAFEHFEVA------ASCCRFLPEVEE 1075


>gi|293359079|ref|XP_002729487.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 1
           isoform 1 [Rattus norvegicus]
          Length = 773

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 417 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 476

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 477 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 532

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 533 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 587

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     +  + ++++   MG   +A       +   PR  E + L
Sbjct: 588 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 647

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H  +K L   + AL     DP
Sbjct: 648 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 676


>gi|196014608|ref|XP_002117163.1| hypothetical protein TRIADDRAFT_51004 [Trichoplax adhaerens]
 gi|190580385|gb|EDV20469.1| hypothetical protein TRIADDRAFT_51004 [Trichoplax adhaerens]
          Length = 929

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 57/308 (18%), Positives = 115/308 (37%), Gaps = 49/308 (15%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ SA++    A  
Sbjct: 567 RAAYLEKNH-GTKESLEELLQKAVAHCPKAEVLWLMG-AKSKWLSGDIQSARQILALAFQ 624

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E  RA   L + +  A                   + A++
Sbjct: 625 ANPNSEEIWLAAVKLESENNEDERARILLQKARSTAPTARVFMKSANLEWCLKNLDGALM 684

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L+   +E+                  G++  +     + +K C  S+   + ++   +++
Sbjct: 685 LLKEGIEHYPTFAKFYMMTGQIYEQIGNIDKARESYSDGVKKCPKSVSLWLLSSGLELTK 744

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLV 329
            +  KA  +LE+    NP  PE+      + +E     +GK   A  L+    E+ +S +
Sbjct: 745 GEVTKARSMLERGRSRNPKCPELWLQAIRVENEHGNKPMGKSLMAKALQ----ENPDSGI 800

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           + ++ A+ M +      K++ AMK       + + +A++  + S    K   W   A+  
Sbjct: 801 LWAE-AIFMETRPVRRTKSLDAMKRCEHDAHVLVAVARLFWSESK-VTKAREWFHRAVKI 858

Query: 389 MPDP--LW 394
            PD    W
Sbjct: 859 DPDNGDAW 866


>gi|271502389|ref|YP_003335415.1| HemY protein [Dickeya dadantii Ech586]
 gi|270345944|gb|ACZ78709.1| HemY protein [Dickeya dadantii Ech586]
          Length = 398

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 53/374 (14%), Positives = 114/374 (30%), Gaps = 27/374 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ +L  FL A++ +  + R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNIETSVTGLVIMLVLFLLAFLAVEWLLRRVFRTGARTRGWFIGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +  +     L+ +   +     K+ +  +         + YLL  + A          
Sbjct: 81  RTRARQQTKAALLKLTEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTR 138

Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + LE   +        +  TR               + ++A+    + L+++P  P V  
Sbjct: 139 QYLERAAEIADGDQLPVDITRV-------RIQLTRNEDHAARHGVDRLLEVAPRHPEVLR 191

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIAS 245
              Q ++    +S  +  L   +K          E  +   I L+ +++   + G     
Sbjct: 192 LAEQAFLRTHAYSALLDILPAMRKTRLHDEPSLDELQQRATIGLMDQAMS--EGGSEGLK 249

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                +  K   +  M    A + LI  +    A+ I+    K      +  +   L S 
Sbjct: 250 QWWKNQPRKARQSLAMQVAMAER-LIVCDDPVTAQDIIIDGLKQQFDYRLVQLLPRLNSG 308

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                 K   +  + +         + ++ ++ G   QA      A+ + P    +   A
Sbjct: 309 QPEPLEKLLRQRLKQHNNDALLHSTLGQLLMKHGEWQQASDAFSAALALRPDAYDYAWCA 368

Query: 366 QIEQANSHNTDKIL 379
                     D   
Sbjct: 369 DAFDRLKRPEDAAR 382


>gi|66347873|ref|NP_001018115.1| O-linked N-acetylglucosamine transferase isoform 2 [Danio rerio]
 gi|56967374|gb|AAW31871.1| O-GlcNAc transferase variant 2 [Danio rerio]
          Length = 1052

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A++L         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   + A E     L++  T   ++ +L       G++  A +   KAL++ P+
Sbjct: 290 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499



 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 110/350 (31%), Gaps = 71/350 (20%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEV---QIALAERQ 135
           G  A  TGL  +A     + +   A + H     +    N  ++ LL     Q    +R 
Sbjct: 6   GNVADSTGLAELAHREYQSGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 136 YNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + +   ++   ML    +    VY         G L  A  +   AL + PD       
Sbjct: 65  AHFSTLAIKQNPMLAEAYSNLGNVY------KERGQLQEAIEHYRHALRLKPDFIDGYIN 118

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI--------- 243
           +    V A +   A+       +   + +     +  + ++L   ++             
Sbjct: 119 LAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP 178

Query: 244 --------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                                + H   +++ L  N +        + I+     K   I 
Sbjct: 179 NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEARIF 231

Query: 284 EKIWK-------VNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVI 330
           ++          ++P     H  +A +Y    L +  +   +RA+ L        ++   
Sbjct: 232 DRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDAYCN 288

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
           ++    E G++ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 289 LANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQ 338


>gi|74007684|ref|XP_858918.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform
           11 [Canis familiaris]
          Length = 1062

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|62821820|ref|NP_001017359.1| O-linked N-acetylglucosamine transferase isoform 1 [Danio rerio]
 gi|56967372|gb|AAW31870.1| O-GlcNAc transferase variant 1 [Danio rerio]
          Length = 1062

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A++L         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   + A E     L++  T   ++ +L       G++  A +   KAL++ P+
Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRVLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|190340092|gb|AAI63923.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Danio rerio]
          Length = 1046

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A++L         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   + A E     L++  T   ++ +L       G++  A +   KAL++ P+
Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRVLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|83593548|ref|YP_427300.1| sulfotransferase [Rhodospirillum rubrum ATCC 11170]
 gi|83576462|gb|ABC23013.1| sulfotransferase [Rhodospirillum rubrum ATCC 11170]
          Length = 656

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 70/222 (31%), Gaps = 13/222 (5%)

Query: 133 ERQYNIAHEKL-EMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                 A   L   +   P       +  L  +  R GDL +A  +  +A+    D    
Sbjct: 45  AGDDQRARLALDRALALRPRAAEALLLRGLVDQ--RRGDLAAAAEWFRRAIRARKDFADA 102

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +    +   +   A+    +    A       A+  +  +    D+GD+  +     
Sbjct: 103 HLNLGSCLIGLGQTEEALRQFGRAVALAPGM----ALAHLNLAQALLDQGDLGRARSAID 158

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI----ANIYTHLLSEN 306
            +  L  +++   +  A+ L +Q     A    E      P   +    A  +  L    
Sbjct: 159 RARALAPDALPILLARARILAAQEDYEAAGAAWEDCVARAPGDVLVLNDAANFL-LEDNR 217

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               L    R   +   S E    + +  +  G++D+A A+A
Sbjct: 218 VEDSLALYRRAVALAPTSQEVRKNLIRALMTTGALDEAEAEA 259



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 8/169 (4%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           LI  + +    GD   +      +L L   +  A +        +     A     +  +
Sbjct: 35  LIRAARDWLGAGDDQRARLALDRALALRPRAAEALLLRGLVDQRRGDLAAAAEWFRRAIR 94

Query: 289 VNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                + A+ + +L S       T   L++  R   +      + + +++  L+ G + +
Sbjct: 95  AR--KDFADAHLNLGSCLIGLGQTEEALRQFGRAVALAPGMALAHLNLAQALLDQGDLGR 152

Query: 344 AHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           A +    A  +AP    I L  A+I  A          W      A  D
Sbjct: 153 ARSAIDRARALAPDALPILLARARILAAQEDYEAAGAAWEDCVARAPGD 201



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 6/197 (3%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           + A +   AR              E L  LL   +         A E     ++      
Sbjct: 43  LGAGDDQRARLALDRALALRPRAAEAL--LLRGLVDQRRGDLAAAAEWFRRAIRARKDFA 100

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A  +L      +G    A R   +A+ ++P        + Q  +   +  RA + +++ 
Sbjct: 101 DAHLNLGSCLIGLGQTEEALRQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRA 160

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +  A +       +L+AR+   A + D  A+     + +      ++    AA  L+  N
Sbjct: 161 RALAPDA----LPILLARARILAAQEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDN 216

Query: 275 KKRKAEVILEKIWKVNP 291
           +   +  +  +   + P
Sbjct: 217 RVEDSLALYRRAVALAP 233



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%)

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
            S E L+  ++  L  G   +A      A+ + PR    LLL  +      +      W 
Sbjct: 30  NSPEGLIRAARDWLGAGDDQRARLALDRALALRPRAAEALLLRGLVDQRRGDLAAAAEWF 89

Query: 383 QSALHAMPD 391
           + A+ A  D
Sbjct: 90  RRAIRARKD 98


>gi|218781014|ref|YP_002432332.1| hypothetical protein Dalk_3174 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762398|gb|ACL04864.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 667

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 86/274 (31%), Gaps = 23/274 (8%)

Query: 95  IAAHNIPLARKMHSYVSQQ---HTFHNEY----LVYLLEVQIALAERQYNIAHEKLEMML 147
           +AA +   + K       +              L   L            +A  +    +
Sbjct: 385 LAARDYLNSWKNDREAFMRNLHFYLDYPPSLVGLGNWLTA-----NGYEELAFSRFYKAV 439

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           ++      A Y L       GD + A+ +  +AL + P A      +    V       A
Sbjct: 440 EVDPGYAPAHYYLANALAAQGDYSGAEAHYREALRLKPGAVRALSRLGALLVRMGRPDEA 499

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  L +  +          +  +A +L + D       Y     ++ L  +S  A+   A
Sbjct: 500 VPLLEKALRADPAGE--EPLTTLAGALASLDMLHQAEKY--YRTAMDLHPDSGAAAQGLA 555

Query: 268 KSLISQNKKRKAEVILEKIW-----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           + L+   +  +A  +LE        K   H  + ++Y  +   +      +       + 
Sbjct: 556 EVLVRTGRPEEAAPLLENNLAMGFNKAESHFSLGDVYLQMR--DYPQAASQFRMAIAEDS 613

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              ++   +  + L MG   +A  +   A+ + P
Sbjct: 614 GLAKAHNSLGAVLLMMGRKQEAMEQFSKALDLDP 647


>gi|238786065|ref|ZP_04630024.1| hypothetical protein yberc0001_36460 [Yersinia bercovieri ATCC
           43970]
 gi|238713041|gb|EEQ05094.1| hypothetical protein yberc0001_36460 [Yersinia bercovieri ATCC
           43970]
          Length = 389

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 86/253 (33%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGFYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W+ AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGIDDLDKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  I++ +  K    LE++ +          P +++ Y HL
Sbjct: 203 LKKAASADKQCARVSIMQGRVHIARGEYAKGVEALERVLEQDKEVVSEALPMLSDCYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
                        R  E N  +  + +++++I  +    D A       ++  P   + +
Sbjct: 263 QQPQAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|329667446|gb|AEB93394.1| hypothetical protein LJP_1071c [Lactobacillus johnsonii DPC 6026]
          Length = 420

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 10/253 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A +
Sbjct: 62  FPKEDLFKVYLAEILLNDGNEDDGLQLLYDVKPDSDAYLESLLDLADYYQSNGLIETAHQ 121

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  ++PD   +   + +   L+ ++S A+    +  KN K ++    ++L  R   
Sbjct: 122 KLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFSE---VVLSQRIAA 178

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              K        + I+S +    SI A   A   ++S N  + A   L+++ +  P    
Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 238

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A      
Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296

Query: 351 AMKIAPRKEIFLL 363
            +++AP      L
Sbjct: 297 GLEVAPDNSDLRL 309



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 70/194 (36%), Gaps = 21/194 (10%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--- 163
              +       +E  +     ++      Y+ A +    + +   T        + E   
Sbjct: 121 QKLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT--------FSEVVL 172

Query: 164 SCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKN 217
           S RI    +      +A +            +A+ +     + A +   AI +L+Q  + 
Sbjct: 173 SQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIET 232

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             ++     +L  A + E+ ++ +++ +    +   +L +         AK+  + N+  
Sbjct: 233 QPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLD 288

Query: 278 KAEVILEKIWKVNP 291
           +AE +L+K  +V P
Sbjct: 289 EAERLLKKGLEVAP 302


>gi|255553813|ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus communis]
 gi|223542929|gb|EEF44465.1| pre-mRNA splicing factor, putative [Ricinus communis]
          Length = 1031

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 99/300 (33%), Gaps = 43/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + +   E L+ +L+      P      +     E    GD+ +A+    +A   
Sbjct: 662 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 719

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--- 240
            P++  +  A  +      E  RA   L + ++            ++ R L N ++    
Sbjct: 720 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNTEEERRL 779

Query: 241 --------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                                      +  +       LK C + I   +  A      N
Sbjct: 780 LDEGLKRFPSFFKLWLMLGQLEERIFHLDKAKEVYESGLKHCPSCIPLWLSLANLEEKMN 839

Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332
              KA  +L    K NP  PE+      + +E+  G  K +  L     +E   S ++ +
Sbjct: 840 GLSKARAVLTMARKKNPQNPELWLA--AVRAESRHGNKKESDILMAKALQECPNSGILWA 897

Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             ++EM    Q   K+M A+K       +   +A++   +    DK   W   A+   PD
Sbjct: 898 -ASIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWHDRK-VDKARTWLNRAVTLAPD 955


>gi|33945209|emb|CAE12014.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense]
          Length = 231

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 2/126 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +LRLI     +S V+ + +  S     V + W      ++  V+L+++      +  L  
Sbjct: 2   LLRLIVLLIFMSPVVFATLWFSDNVGSVQVEWLGWHVDSNMPVLLAVILVVFLIFSALSR 61

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +S      P+ L      R  +KG  AL   L +  + ++   R+  +  +     +N  
Sbjct: 62  LSALVADLPSKLGKSRQARGLEKGMSALLAALDAAESGDVGEGRRFAAEAA--RLLNNPG 119

Query: 121 LVYLLE 126
           L   L+
Sbjct: 120 LAARLD 125


>gi|78355875|ref|YP_387324.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218280|gb|ABB37629.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 886

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 102/315 (32%), Gaps = 15/315 (4%)

Query: 80  NYDKGYKALY---TGLMSIAAHNIPLARKMHSY-VSQQHTFHNEYLVYLLEVQIALAERQ 135
               G  AL     G+++ A  +   A +     VS + T        L   Q+ L    
Sbjct: 260 RTRFGDDALVLMLEGMLAYADKDYEAAARAFQRSVSARPTLD--AFFRLGLAQVGL--GD 315

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
              A  +  ++L        A   +     R   +  AQ  A + +++ PD PW    + 
Sbjct: 316 LETALSQFRVVLDKQPQHAEARRMVAATLLRQNRIEDAQAEARRLVEMHPDYPWGHFLLA 375

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +   +   A   L+     A       A   + +S  N   G    +  D   ++  
Sbjct: 376 SAAMARGDMELAARELDVVTSLAPAM----AEAHLQKSYINISSGRFDLAESDLNSAVSA 431

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
              +I A +   +  + + +  +AE +L +     P   +   Y   + +      K   
Sbjct: 432 SPGNIQARVALFQFNMGRGRFDEAEKVLTEGMNGTPRDAVLWNYIAGMYQLRRDDAKALE 491

Query: 316 RLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
            LE+      +  +S +  S+I    G    A  +    ++  P    FL+++ +    +
Sbjct: 492 ALEKAQQADPDLRDSYMTASRIRAAAGDEAGALEQLERYLQRHPDDGRFLVVSAVLLDLT 551

Query: 373 HNTDKILYWTQSALH 387
            +  K       A  
Sbjct: 552 GDAQKAGARLDRARE 566



 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 84/293 (28%), Gaps = 45/293 (15%)

Query: 67  SCPAMLFHMLH-KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
                L   L  +        AL    +  +   +  AR M           ++ L  LL
Sbjct: 149 GAEDALRSALQLEPRRISSRLALAR--LYASTGRVDEARTMVGEALAISPADHDSL--LL 204

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             ++                + +     ++A Y +  +  + G+L++A++  T A   + 
Sbjct: 205 AAELTRYSGDDAAITAAYRTLSEQYPDDKYARYMIGAQEMKTGNLDAARQ--TTAAMRTR 262

Query: 186 DAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                   +++       K++  A     +        +           L     GD+ 
Sbjct: 263 FGDDALVLMLEGMLAYADKDYEAAARAFQRSVSARPTLD-----AFFRLGLAQVGLGDLE 317

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +       L        A    A +L+ QN+   A+                       
Sbjct: 318 TALSQFRVVLDKQPQHAEARRMVAATLLRQNRIEDAQA---------------------- 355

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                     A RL E++ +      +++  A+  G ++ A  +  +   +AP
Sbjct: 356 ---------EARRLVEMHPDYPWGHFLLASAAMARGDMELAARELDVVTSLAP 399



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 78/260 (30%), Gaps = 35/260 (13%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+ + A  +   AL+  P       A+ Q Y    +  +A T   +  +        
Sbjct: 40  MEQGNSSGAIVFFKSALEKEPQLYEARLALGQAYAAEGKLDQAETAFQKCLRQNASDPEL 99

Query: 225 RAIL----------------------LIARSLENAD--------KGDMIASYHDAIESLK 254
           R  L                      L  RS E  +         G+   +      +L+
Sbjct: 100 RLALARLYTQLRKSRDTIEHVNAYEGLKGRSAETEELKGIALAMGGNAPGAEDALRSALQ 159

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKL 311
           L    I + +  A+   S  +  +A  ++ +   ++P      +        S +     
Sbjct: 160 LEPRRISSRLALARLYASTGRVDEARTMVGEALAISPADHDSLLLAAELTRYSGDDAAIT 219

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRKEIFLLLAQIEQA 370
                L E   +   +  ++    ++ G++D A    A +  +      + +L   +  A
Sbjct: 220 AAYRTLSEQYPDDKYARYMIGAQEMKTGNLDAARQTTAAMRTRFGDDALVLMLEGMLAYA 279

Query: 371 NSHNTDKILYWTQSALHAMP 390
           +           Q ++ A P
Sbjct: 280 DKDYEAAARA-FQRSVSARP 298



 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             D   A     KA    PD         +    A + + A+  L +  +   +  R   
Sbjct: 483 RRDDAKALEALEKAQQADPDLRDSYMTASRIRAAAGDEAGALEQLERYLQRHPDDGR--- 539

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEK 285
             L+  ++     GD   +      + +L   +++ A++     L+S+ +  KA  +L+ 
Sbjct: 540 -FLVVSAVLLDLTGDAQKAGARLDRARELDEPSALPATVSR---LMSRGETDKARQLLQD 595

Query: 286 IWKVN 290
            +  +
Sbjct: 596 AYAAS 600



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 87/297 (29%), Gaps = 39/297 (13%)

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
            PA +  ++ +   DK  + L     +  +                       L   L  
Sbjct: 573 LPATVSRLMSRGETDKARQLLQDAYAASGS-----------------LRDLSMLTGFLTG 615

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q      + + A    E           A   ++       D   A   A K  D+   +
Sbjct: 616 Q-----GRTDEALALYEAYAAKDP--VAAARGIFAVHTLKRDYQKALEQARKLSDLEASS 668

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASY 246
           P              +            +  + + + +A  LLIA++       ++  + 
Sbjct: 669 PEGALQEAATMERMGD------PAAALARLEEAYRKFQAPQLLIAQASVARRMDNIDKAE 722

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTH 301
                 LK   + + A + AA+    + +  +A    E+I +    P+ A         +
Sbjct: 723 AYIRTCLKAAPDFVPAKVAAAELAHQRGRLDEAAAAYEEILQRV--PDDAAVMNNLAMIY 780

Query: 302 LLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E T+ + L+ AL       +S + +  +       G   +A      A  + P 
Sbjct: 781 VRDEATLRRALQLALTAYVRQPDSPQIMDTLGLCLTAAGRPAEAVRVLRRASALLPD 837


>gi|15966522|ref|NP_386875.1| adenylate/guanylate cyclase protein [Sinorhizobium meliloti 1021]
 gi|15075793|emb|CAC47348.1| Probable adenylate/guanylate cyclase [Sinorhizobium meliloti 1021]
          Length = 634

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 17/225 (7%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILL 229
           A+R   KA+++ P+       + +     ++W      L         A   + N A   
Sbjct: 367 ARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLESILDMSARALALDPNLAEAH 426

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            +R L     G    +  + +++L L  +   A++   + L +Q + R+A    E+  ++
Sbjct: 427 ASRGLALNHDGQTEEASREFLQALALDPSLYEANLYYGRFLFAQGRFREAIGFFERAAEI 486

Query: 290 N------P-HPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALE 337
                  P H  +   Y  L  E    +     ++RA    E N E+       +     
Sbjct: 487 RSDDYFSPIH--LMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHRGALALAH 544

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
           MG  ++A      A+ I P   +    A    +     ++ L   
Sbjct: 545 MGEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELL 589



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 23/167 (13%)

Query: 133 ERQYNIAHEKL-EMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI------S 184
           + Q   A  +  + +   P+  E  +Y   +  +   G    A  +  +A +I      S
Sbjct: 436 DGQTEEASREFLQALALDPSLYEANLYYGRFLFAQ--GRFREAIGFFERAAEIRSDDYFS 493

Query: 185 PDAPWVTEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           P         +      + W+R     A + + +  +NA   +R         +L  A  
Sbjct: 494 PIHLMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHR--------GALALAHM 545

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           G+   +      +L +  + I+A   AA       +  +A  +LE +
Sbjct: 546 GEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELLETV 592


>gi|74007670|ref|XP_849392.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform
           2 [Canis familiaris]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|315187458|gb|EFU21214.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 454

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 91/321 (28%), Gaps = 37/321 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A K     S +     +    LL V + L   +   A  +L  +L+       A+
Sbjct: 48  GRPEDAIKAFEEASARA--PEDPETRLLYVNLLLMAGKETEAEAELSRLLEEYPDHVGAL 105

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L       G     +R   + L + P       A+ +  +  K+++RA        + 
Sbjct: 106 YTLALLEGARGREEEHRRLLERVLALDPHHTGARAALGELLLSKKQYARAEKEFTTVLEE 165

Query: 218 -----------AKEWNRNRAI-------------------LLIARSLENADKGDMIASYH 247
                         + R R                         R+       +   +  
Sbjct: 166 DPGDLVALVGLGNVYLRTRKAEKAAEVLTQAIRQAPDYPFAYADRARAWQMLDEPEKAEQ 225

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           D   +++L           A+ LIS+ +  +A   L +   ++P   +A +Y      + 
Sbjct: 226 DISRAIELDPGFSWHYYDRARILISEGQMDRALEDLSRAILLDPSNFLAYVY-RARIYDG 284

Query: 308 VGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              +K A     R  E+  +     V  +           A           P +   +L
Sbjct: 285 KEMMKEACSDYARALELRPDYYYIYVPYAVTLYHEKDYRGAAVYFDKGFDAYPSEYPLIL 344

Query: 364 LAQIEQANSHNTDKILYWTQS 384
           LA      + +   +  +   
Sbjct: 345 LAATAYKRAGDDRMMRDYLTR 365



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 61/313 (19%)

Query: 110 VSQQHTFHNEYLVYLLE-------VQIALAE-----RQYNIAHEKLEMMLQIPATREFAV 157
              +   H   L  +L         + AL E     +QY  A ++   +L+       A+
Sbjct: 114 ARGREEEHRRLLERVLALDPHHTGARAALGELLLSKKQYARAEKEFTTVLEEDPGDLVAL 173

Query: 158 YSL----------------YFESCRI------------------GDLNSAQRYATKALDI 183
             L                  ++ R                    +   A++  ++A+++
Sbjct: 174 VGLGNVYLRTRKAEKAAEVLTQAIRQAPDYPFAYADRARAWQMLDEPEKAEQDISRAIEL 233

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P   W      +  +   +  RA+  L++        + +  +  + R+     K  M 
Sbjct: 234 DPGFSWHYYDRARILISEGQMDRALEDLSRAI----LLDPSNFLAYVYRARIYDGKEMMK 289

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI---ANI 298
            +  D   +L+L  +     +  A +L  +   R A V  +K +   P  +P I   A  
Sbjct: 290 EACSDYARALELRPDYYYIYVPYAVTLYHEKDYRGAAVYFDKGFDAYPSEYPLILLAATA 349

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y     ++ + +     R+ +I ++S+     V++  LE         +         R 
Sbjct: 350 YKRA-GDDRMMRDYLTRRMPQIPRDSI--YYFVARYYLEGKGDSLVLTRLRDIADKVERT 406

Query: 359 EIFL---LLAQIE 368
            ++    ++A+ E
Sbjct: 407 RVYFFLGIMAEEE 419


>gi|82701510|ref|YP_411076.1| tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
 gi|82409575|gb|ABB73684.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
          Length = 929

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 13/239 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181
           L     L   +   A + L   L+      + FA+     E+  +  D   A  Y   A 
Sbjct: 345 LLASALLKNGETKRAIDILTPPLKNVKEDPQLFALAG---EAYMQAKDFAKATEYFEMAS 401

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           DI+P +  +  A+    +   E +RAI+ L    K   +    RA +L+  +     + D
Sbjct: 402 DIAPRSAMLHTALSMSRLGQGENARAISELETATK--LDPKSPRAGVLLVMTHLRLKEFD 459

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIAN-I 298
              +   A+E  K   ++ +         + +N    A    EK   + P+  P IAN  
Sbjct: 460 KALAAVKALE--KENPDNPLIQNLKGGVYLGKNDIANARASFEKALAIQPNYFPTIANLA 517

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +  +      KR   + E +K++++++V ++ +A+  G   +A      AM+  P 
Sbjct: 518 RLDIQDKKPDAARKRFEAILEKDKKNIQAMVALAGLAVNQGQNQKATEWLERAMQANPD 576



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 82/289 (28%), Gaps = 35/289 (12%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
             +  L     L   +   A    E  L        A+  L   S    D+  A  ++ +
Sbjct: 137 AQILTLRGNAQLGLGKTAEAKALFEQALGHNPDSADALIGLAKYSLVQRDVEGATHFSEQ 196

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITF---------------------------LN 212
           A+  SP              +  +   A+                               
Sbjct: 197 AVSRSPQNVEAWLFRGDLLRMQGKSGEALAAYDQVVKLKPNAAIAYINKAFIEIGTGKFE 256

Query: 213 QKKKNAKEWNRNRAILLI--ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             K +     +    L++   ++L +  +    A+     + L    + + + + A    
Sbjct: 257 AAKADIDAARKISPSLMVFYTQALLDFSQQKPAAALESLQQVLSKSPDHMPSVLLAGAVQ 316

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVES 327
            +     +AE  L+   + +P    A        L +  T   +       +  KE  + 
Sbjct: 317 FALGSMPQAEQHLKHYLEKDPGNIYARKLLASALLKNGETKRAIDILTPPLKNVKEDPQL 376

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQANSH 373
             +  +  ++     +A     +A  IAPR       L ++++ Q  + 
Sbjct: 377 FALAGEAYMQAKDFAKATEYFEMASDIAPRSAMLHTALSMSRLGQGENA 425



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 96/293 (32%), Gaps = 35/293 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFA 156
                A  +   +   H+  +  L  L   Q  LA    + A E    +  + P +    
Sbjct: 592 GEKQKALALAKKLEGTHSKDSAVLDLL--AQAQLANNDKSSALESYARLAVVQPESPLVQ 649

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              +      + +L++A     K+L I PD      A +        + +AI    Q +K
Sbjct: 650 FR-IASIHMAMRNLSAASDALKKSLAIKPDYLAAQLAQIDIEAEQGNYEKAIAMARQVQK 708

Query: 217 -----------NAKEWNRNRAILLIARSLENA------------------DKGDMIASYH 247
                            + +   L A + E A                    G    +  
Sbjct: 709 QHKGSPAGYIAEGDLLLKQKKPALAASAYEQAFAVNKTSPLLIKLHASLRQAGKDKEADL 768

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSE 305
             IE LK   N + A +  A + +++ K   A    + + K  P   P + N+ T    +
Sbjct: 769 RLIEWLKKHPNDLSARMYLADTFLTEGKLAAAVEQYQTVLKEQPKFAPALNNLATAYQRQ 828

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                L+ A +  ++  E+   L  +  + LE  +I +A      A  +AP+ 
Sbjct: 829 KDPRALEYAEKAYQLATENPAVLDTLGWVLLEQENIARALPLLQKAASLAPQA 881



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 71/241 (29%), Gaps = 14/241 (5%)

Query: 125 LEVQIALA-----ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L  Q+A       +  Y  A      + +          +      +      A     +
Sbjct: 680 LAAQLAQIDIEAEQGNYEKAIAMARQVQKQHKGSPAGYIAEGDLLLKQKKPALAASAYEQ 739

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++  +P + +         K+    +  +   KK+  + +       +  +     +
Sbjct: 740 AFAVNKTSPLLIKLHASLRQAGKDKEADLRLIEWLKKHPNDLSAR-----MYLADTFLTE 794

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEIANI 298
           G + A+       LK       A    A +   Q   R A    EK ++    +P + + 
Sbjct: 795 GKLAAAVEQYQTVLKEQPKFAPALNNLATAYQRQKDPR-ALEYAEKAYQLATENPAVLDT 853

Query: 299 --YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +  L  EN    L    +   +  ++ E     +   ++ G+  QA  +    +    
Sbjct: 854 LGWVLLEQENIARALPLLQKAASLAPQAGEIRYHFASALVKSGNKSQARKELEQILATGK 913

Query: 357 R 357
            
Sbjct: 914 T 914



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 93/317 (29%), Gaps = 36/317 (11%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + + +  + +    +  L+  L+  + L +     A    E  L I       + +L   
Sbjct: 460 KALAAVKALEKENPDNPLIQNLKGGVYLGKNDIANARASFEKALAIQPNYFPTIANLARL 519

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-- 221
             +    ++A++     L+          A+    V   +  +A  +L +  +   +   
Sbjct: 520 DIQDKKPDAARKRFEAILEKDKKNIQAMVALAGLAVNQGQNQKATEWLERAMQANPDVLQ 579

Query: 222 -------------NRNRAILLI---------------ARSLENADKGDMIASYHDAIESL 253
                         + +A+ L                  +       D  ++        
Sbjct: 580 PAILLGTHYLRLGEKQKALALAKKLEGTHSKDSAVLDLLAQAQLANNDKSSALESYARLA 639

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGK 310
            +   S +     A   ++      A   L+K   + P     ++A I       N    
Sbjct: 640 VVQPESPLVQFRIASIHMAMRNLSAASDALKKSLAIKPDYLAAQLAQIDIEAEQGNYEKA 699

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
           +  A ++++ +K S    +    + L+      A +    A  +     + + L    + 
Sbjct: 700 IAMARQVQKQHKGSPAGYIAEGDLLLKQKKPALAASAYEQAFAVNKTSPLLIKLHASLRQ 759

Query: 371 NSHNTD---KILYWTQS 384
              + +   +++ W + 
Sbjct: 760 AGKDKEADLRLIEWLKK 776



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  ++ R    GD  SA      AL  +PD       +   Y    ++  A   L +   
Sbjct: 39  LMADAKRYEESGDHKSAIIQLKNALQQNPDNSEARYLLGAIYNKTGDFQSAEKELRKALS 98

Query: 217 NAKEW-----------------------------NRNRAILLIARSLENADKGDMIASYH 247
              +                                  A +L  R       G    +  
Sbjct: 99  LGMDAGKVLPELGQALLRLGAYQQILDETKELADKTKSAQILTLRGNAQLGLGKTAEAKA 158

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLS 304
              ++L    +S  A I  AK  + Q     A    E+    +P    A ++      + 
Sbjct: 159 LFEQALGHNPDSADALIGLAKYSLVQRDVEGATHFSEQAVSRSPQNVEAWLFRGDLLRMQ 218

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             +   L    ++ ++   +  + +  + I +  G  + A A    A KI+P   +F
Sbjct: 219 GKSGEALAAYDQVVKLKPNAAIAYINKAFIEIGTGKFEAAKADIDAARKISPSLMVF 275


>gi|238754986|ref|ZP_04616335.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473]
 gi|238706845|gb|EEP99213.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473]
          Length = 389

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 92/254 (36%), Gaps = 21/254 (8%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A+   T+ ++ +     
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFTQLIEETEFRIG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W +AI    +  K  K+  R+  A      +L+     D+  + + 
Sbjct: 143 ALQQLLTIHQATSDWLKAIEVAERLVKLGKDRQRSEIAHFYCELALQAMGSDDLDKAMNL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++     +    SI   +  I++    KA   L+++ +          P + + Y HL
Sbjct: 203 LKKAANADKDCARVSIMQGRVHIARGDYGKAAEALQQVLEQDKEVVSEALPMLHDCYQHL 262

Query: 303 LSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI- 360
                    LKR     E N  +  + +++++I  +    D A       ++  P   + 
Sbjct: 263 QQPRVWADFLKRC---VEDNTGAT-AELMLAEILEQQDGRDVAQVYINRQLQRHPTMRVF 318

Query: 361 FLLL----AQIEQA 370
           + L+    A  E+ 
Sbjct: 319 YRLMDYHLADAEEG 332


>gi|301791309|ref|XP_002930623.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Ailuropoda melanoleuca]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|66347871|ref|NP_001018116.1| O-linked N-acetylglucosamine transferase isoform 3 [Danio rerio]
 gi|56967376|gb|AAW31872.1| O-GlcNAc transferase variant 3 [Danio rerio]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A++L         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   + A E     L++  T   ++ +L       G++  A +   KAL++ P+
Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRVLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|330901072|gb|EGH32491.1| HemY [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 279

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 11/214 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD + A        +  P  P V   + + +    +WS  +  + + +K+     + 
Sbjct: 30  QDRGDTDGALTTLLAMKERHPHNPQVLRQLQRLHQQRGDWSDVVRLMPELRKDKVLPPKE 89

Query: 225 RAIL----------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQ 273
            A L          L A S         + S   A + L          + A A  L   
Sbjct: 90  LAELERRAWGENLSLAAYSEGIEGAPTGLPSLESAWQGLGSAQRQEPQLVLAYADQLRRL 149

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
             + +AE +L    K   +  +A +Y  +   + + +L+ A    + +      L+ + +
Sbjct: 150 GAEAQAEEVLRSALKREYNSHLARLYGLVRGTDPLKQLQAAEGWLKHHPADPSLLLSLGR 209

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
           I L+     +A      ++++    E    LA++
Sbjct: 210 ICLQGRLWGKARDYLESSLRMERNPETCAELARL 243


>gi|281337757|gb|EFB13341.1| hypothetical protein PANDA_021118 [Ailuropoda melanoleuca]
          Length = 1037

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 98  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 155

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 156 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 210

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 211 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 266

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 267 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 326

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 327 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 384



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 291 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 350

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 351 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 406

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 407 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 464

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 465 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 500



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 28/223 (12%)

Query: 149 IPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKE 203
            P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       +
Sbjct: 4   EPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLD 63

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            S   + L  K+      N   A           ++G +  +      +L+L  + I   
Sbjct: 64  RSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 117

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322
           I  A +L++      A        + N  P++     + +  +    LK   RLEE    
Sbjct: 118 INLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKAC 170

Query: 323 --ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
             +++E+     V+   L       G I  A      A+ + P
Sbjct: 171 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 213


>gi|66347879|ref|NP_001018117.1| O-linked N-acetylglucosamine transferase isoform 4 [Danio rerio]
 gi|56967378|gb|AAW31873.1| O-GlcNAc transferase variant 4 [Danio rerio]
          Length = 1036

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A++L         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   + A E     L++  T   ++ +L       G++  A +   KAL++ P+
Sbjct: 290 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499



 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 110/350 (31%), Gaps = 71/350 (20%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEV---QIALAERQ 135
           G  A  TGL  +A     + +   A + H     +    N  ++ LL     Q    +R 
Sbjct: 6   GNVADSTGLAELAHREYQSGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 136 YNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + +   ++   ML    +    VY         G L  A  +   AL + PD       
Sbjct: 65  AHFSTLAIKQNPMLAEAYSNLGNVY------KERGQLQEAIEHYRHALRLKPDFIDGYIN 118

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI--------- 243
           +    V A +   A+       +   + +     +  + ++L   ++             
Sbjct: 119 LAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP 178

Query: 244 --------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                                + H   +++ L  N +        + I+     K   I 
Sbjct: 179 NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEARIF 231

Query: 284 EKIWK-------VNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVI 330
           ++          ++P     H  +A +Y    L +  +   +RA+ L        ++   
Sbjct: 232 DRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDAYCN 288

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
           ++    E G++ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 289 LANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQ 338


>gi|74007686|ref|XP_538075.2| PREDICTED: similar to O-linked GlcNAc transferase isoform 2 isoform
           1 [Canis familiaris]
          Length = 1036

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|307300441|ref|ZP_07580221.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
 gi|307318306|ref|ZP_07597741.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti AK83]
 gi|306895988|gb|EFN26739.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti AK83]
 gi|306904607|gb|EFN35191.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
          Length = 629

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 17/225 (7%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILL 229
           A+R   KA+++ P+       + +     ++W      L         A   + N A   
Sbjct: 362 ARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLESILDMSARALALDPNLAEAH 421

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            +R L     G    +  + +++L L  +   A++   + L +Q + R+A    E+  ++
Sbjct: 422 ASRGLALNHDGQTEEASREFLQALALDPSLYEANLYYGRFLFAQGRFREAIGFFERAAEI 481

Query: 290 N------P-HPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALE 337
                  P H  +   Y  L  E    +     ++RA    E N E+       +     
Sbjct: 482 RSDDYFSPIH--LMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHRGALALAH 539

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
           MG  ++A      A+ I P   +    A    +     ++ L   
Sbjct: 540 MGEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELL 584



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 23/167 (13%)

Query: 133 ERQYNIAHEKL-EMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI------S 184
           + Q   A  +  + +   P+  E  +Y   +  +   G    A  +  +A +I      S
Sbjct: 431 DGQTEEASREFLQALALDPSLYEANLYYGRFLFAQ--GRFREAIGFFERAAEIRSDDYFS 488

Query: 185 PDAPWVTEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           P         +      + W+R     A + + +  +NA   +R         +L  A  
Sbjct: 489 PIHLMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHR--------GALALAHM 540

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           G+   +      +L +  + I+A   AA       +  +A  +LE +
Sbjct: 541 GEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELLETV 587


>gi|126667425|ref|ZP_01738397.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
 gi|126628181|gb|EAZ98806.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
          Length = 809

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 98/299 (32%), Gaps = 18/299 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           + +I A N   A+ M   + +     NE L  +L    A        A      +   P 
Sbjct: 288 IAAIQAGNFDEAKTMLRDMRKLD-PDNEQLALMLGTLSAGTGELEEGAELLSGNL--DPE 344

Query: 152 T---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSR 206
           T   R   + +       +G+   A     +A+   P+         V+    +  + + 
Sbjct: 345 TTPTRF--IRASTMAQIDVGEREEALATLERAVKARPNDNDLLAMHGVLAL-SMPGQEAA 401

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            +T L++   N  +  R R    IA +    +      +      +         ++   
Sbjct: 402 GVTSLSKAISNEPDRTRLR----IALARHYINNQQTEQALGQLRMAFTTQPADWASTAIY 457

Query: 267 AKSLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
              LI   + R+AE +   L   +   P   +          N+   + R  +L   N  
Sbjct: 458 LSVLIDSGETREAEDVRDSLINGYGNEPQAVLLAAIADGRMGNSGPAITRLEKLTTDNPN 517

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
              + + ++ +     + D+A  + + A  I P     L  A    A++H+ +++  W 
Sbjct: 518 MQPAHLALANLYASTDNSDKAVEQLLAAAVITPEVIGPLQQAGQLYASNHSVEEVQQWL 576



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L+E +        + A      +    +T   A+  L     + G+  +A   A   L  
Sbjct: 141 LIEAKAMRLSGDVDGAVTAYRDISANYSTSVDAITGLIESHIQQGNARTALGAANDWLAS 200

Query: 184 SPDAPWVTEAVVQQYVLAK----EWSRAITFLNQKKKNAKEWNR---NRAILLIARSLEN 236
                  T AV+    LA+    E   A   L          +     R  LL   S   
Sbjct: 201 H----ETTPAVLYLKGLAQYQLDELEPATATLTNAVTGMPTSDMFLPLRGQLLSLLSRVL 256

Query: 237 ADKGDMIASY---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            ++G +  +        E           ++ AA   I      +A+ +L  + K++P  
Sbjct: 257 TEQGKITEAQVYGRILAEQTDSGAREQGEAVIAA---IQAGNFDEAKTMLRDMRKLDPDN 313

Query: 294 EIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSK--IALEMGSIDQAHAKAML 350
           E   +    LS  T    + A  L   ++ E+  +  I +     +++G  ++A A    
Sbjct: 314 EQLALMLGTLSAGTGELEEGAELLSGNLDPETTPTRFIRASTMAQIDVGEREEALATLER 373

Query: 351 AMKIAPRKEIFLLL 364
           A+K  P     L +
Sbjct: 374 AVKARPNDNDLLAM 387


>gi|301791307|ref|XP_002930622.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Ailuropoda melanoleuca]
          Length = 1036

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|147899141|ref|NP_001091539.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Bos taurus]
 gi|146186901|gb|AAI40543.1| OGT protein [Bos taurus]
 gi|296470806|gb|DAA12921.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Bos taurus]
          Length = 1036

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|156055314|ref|XP_001593581.1| hypothetical protein SS1G_05008 [Sclerotinia sclerotiorum 1980]
 gi|154702793|gb|EDO02532.1| hypothetical protein SS1G_05008 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 926

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 109/331 (32%), Gaps = 49/331 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIP 150
           SI       AR +++Y  +           L     A  E+ +       +++   ++  
Sbjct: 537 SINRGKYETARAIYAYALRVFVTS----TKLWLA-AADLEKNHGTKEALWQLLEKAVEAR 591

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T E     L  E    G++++A+R   KA + +P+   +  A V+     ++  +A   
Sbjct: 592 PTSEVLWMMLAKEKWLAGEVDNARRVLGKAFNQNPNNEEIWLAAVKLEAENQQPEQAREL 651

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENAD-----------------------------KGD 241
           L   ++ A         +   R L N D                             +G 
Sbjct: 652 LKTARQEAPTDRVWTKSVAYERQLGNIDAALDLANQGLNLFPGAAKLWMMKGQIYESEGK 711

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300
           M  +        K C  S+   +  ++         KA  +L++     P  PE+     
Sbjct: 712 MPQAREAYSTGTKACPKSVPLWLLYSRLEERAGMVVKARSVLDRARLAVPKSPELWTESV 771

Query: 301 HLL---SENTVGKLKRALRLEEINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIA 355
            +    +     K+  A  L+E+      S ++ ++    LE  +  +  A      K+ 
Sbjct: 772 RVERRTNNTAQAKIMMAKALQEV----PNSGLLYTESIWNLEARTQRKPRA-LEAIKKVD 826

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
               +F+ +A+I        +K   W + A+
Sbjct: 827 NDPILFVTIARIFWGERR-LEKAQNWFEKAI 856



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 7/150 (4%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  + ++G    +      +L++   S    + AA    +   K     +LEK  +  P 
Sbjct: 534 AKASINRGKYETARAIYAYALRVFVTSTKLWLAAADLEKNHGTKEALWQLLEKAVEARPT 593

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            E     +A         +   ++    +    N  + E  +   K+  E    +QA   
Sbjct: 594 SEVLWMMLAKEKWLAGEVDNARRV--LGKAFNQNPNNEEIWLAAVKLEAENQQPEQAREL 651

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
              A + AP   ++      E+   +    
Sbjct: 652 LKTARQEAPTDRVWTKSVAYERQLGNIDAA 681


>gi|149758509|ref|XP_001493422.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) isoform 1 [Equus
           caballus]
 gi|291407677|ref|XP_002720149.1| PREDICTED: O-linked GlcNAc transferase isoform 2 [Oryctolagus
           cuniculus]
 gi|296235743|ref|XP_002763023.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Callithrix jacchus]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|126342737|ref|XP_001362233.1| PREDICTED: similar to UDP-N-acetylglucosamine:
           polypeptide-N-acetylglucosaminyl transferase isoform 1
           [Monodelphis domestica]
          Length = 1045

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 54/259 (20%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNR 223
              G L  A  +   AL + PD       +    V A +   A+       +   + +  
Sbjct: 100 KERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCV 159

Query: 224 NRAILLIARSLENADKGDMI-----------------------------ASYHDAIESLK 254
              +  + ++L   ++                                  + H   +++ 
Sbjct: 160 RSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-------NP-----HPEIANIYTH- 301
           L  N +        + I+     K   I ++           +P     H  +A +Y   
Sbjct: 220 LDPNFL-------DAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQ 272

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360
            L +  +   +RA+ L        ++   ++    E GS+ +A      A+++ P   + 
Sbjct: 273 GLIDLAIDTYRRAIEL---QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADS 329

Query: 361 FLLLAQIEQANSHNTDKIL 379
              LA I++   +  + + 
Sbjct: 330 LNNLANIKREQGNIEEAVR 348



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509


>gi|123228956|emb|CAM21281.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Mus musculus]
 gi|123229896|emb|CAM25748.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Mus musculus]
 gi|148682190|gb|EDL14137.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Mus
           musculus]
          Length = 1036

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 499


>gi|46909607|ref|NP_631883.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Mus musculus]
 gi|146325019|sp|Q8CGY8|OGT1_MOUSE RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit
 gi|34785719|gb|AAH57319.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Mus musculus]
 gi|123228957|emb|CAM21282.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Mus musculus]
 gi|123229897|emb|CAM25749.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Mus musculus]
 gi|148682191|gb|EDL14138.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Mus
           musculus]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 561

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 75/229 (32%), Gaps = 11/229 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A E    +L+    +  A++       ++G  + A  Y  +AL + P       
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQN 74

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +         +   A    +Q  +   ++    A      +     +     +     ++
Sbjct: 75  SRGNILSQHGKLVEATIAYDQAIQLQPDY----ATAYNNIANCFFRQKKFDNAKKAYQKA 130

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307
           + L  +   A    A+ LI      +A   L++   ++ H      ++A++Y +L   + 
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYL--GDF 188

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +    +   +  E+ ++        L+     +A      A+ + P
Sbjct: 189 SKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDHFTNALLLNP 237


>gi|3914191|sp|P56558|OGT1_RAT RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit
 gi|1931579|gb|AAC53121.1| O-GlcNAc transferase, p110 subunit [Rattus norvegicus]
          Length = 1036

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 499


>gi|89886173|ref|NP_001034837.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Sus scrofa]
 gi|122142735|sp|Q27HV0|OGT1_PIG RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit
 gi|89114276|gb|ABD61726.1| O-linked N-acetylglucosamine transferase [Sus scrofa]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|32307148|ref|NP_858058.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Homo sapiens]
 gi|68067509|sp|O15294|OGT1_HUMAN RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit
 gi|18250915|emb|CAC86128.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl
           transferase [Homo sapiens]
 gi|23315618|gb|AAH38180.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Homo sapiens]
 gi|30268372|emb|CAD89970.1| hypothetical protein [Homo sapiens]
 gi|119625691|gb|EAX05286.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Homo
           sapiens]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|31873825|emb|CAD97853.1| hypothetical protein [Homo sapiens]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|74007682|ref|XP_858881.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform
           10 [Canis familiaris]
          Length = 1038

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|146284591|ref|YP_001165544.1| TPR repeat-containing protein [Enterobacter sp. 638]
 gi|145320724|gb|ABP62870.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638]
          Length = 697

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 106/299 (35%), Gaps = 18/299 (6%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            A     A ++   V Q      + L  L L +       + ++A + +    Q P    
Sbjct: 26  NAGQAAQAEQLCLRVLQVAPSQPDALNLLGLMMHAY---GKMDLALDYIRKAGQSPGAPA 82

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
               +L     + G L  A++ A +A++  P        +      A ++  ++  L   
Sbjct: 83  IVFSNLAELCRQRGLLQEAEQAARRAVEQEPQLALAWNNLGIILQEAGKFKASLECLQYV 142

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                +     A +    +      GD+  +      +L L  +        A  L    
Sbjct: 143 ASLQPD----NAEVHNNLANTWKRLGDLQRAQESYQRALNLRPDYAEVYSNLASLLSELG 198

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR------LEEINKESVESL 328
              +A     +   +N  P++A+ Y +L     + +++ A        L E +     +L
Sbjct: 199 CIDEAAASARQAIDIN--PQLADAYLNLADIE-LSRMRYAEASHWVKALLEFSPRHAGAL 255

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           + ++ I +     ++A  +A  A+ IAP R    ++L +  QA     D    ++++A+
Sbjct: 256 ITLAHIMIANEHYEEAAFEARKALAIAPDRANAHMILGKALQALGQYEDADRAYSKAAV 314



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 66/195 (33%), Gaps = 13/195 (6%)

Query: 107 HSYVSQQHTFH-NEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            +  S +     N  L   YL    I L+  +Y  A   ++ +L+       A+ +L   
Sbjct: 202 EAAASARQAIDINPQLADAYLNLADIELSRMRYAEASHWVKALLEFSPRHAGALITLAHI 261

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
                    A   A KAL I+PD       + +      ++  A    ++          
Sbjct: 262 MIANEHYEEAAFEARKALAIAPDRANAHMILGKALQALGQYEDADRAYSKAAVLPGTVAE 321

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAE 280
                LIAR++   + GD  A+     ++LK   +S  A I AA+               
Sbjct: 322 E---ALIARAVLLMETGDKQAATAAFEQALKRFPDS--ARIVAARCDNKFYRAGDPD--I 374

Query: 281 VILEKIWKVNPHPEI 295
            ++E      P P +
Sbjct: 375 DVMESALVSEPTPPL 389


>gi|13775066|gb|AAK39123.1|AF363030_1 UDP-N-acetylglucosaminyltransferase [Mus musculus]
          Length = 1046

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|310822882|ref|YP_003955240.1| adventurous gliding motility protein AgmK [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395954|gb|ADO73413.1| Adventurous gliding motility protein AgmK [Stigmatella aurantiaca
           DW4/3-1]
          Length = 4089

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 98/282 (34%), Gaps = 16/282 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKA 180
           L  ++A     +  A  + E M      R       +        R+ D   A     KA
Sbjct: 306 LIERMAERAGDFAPALAQFEAMAGEAKDRTAQVDLWLRVGTGRLKRLNDPAGALVAFEKA 365

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               P          +  +  ++ + A+  L +   + K+     ++ L    L      
Sbjct: 366 AAADPSRADAANTAAEALLEQQKAAEAVAVLERHVGSVKDRTAQSSLRLRLADLCLNQVK 425

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------- 293
           D  A+      +LK    + +A+   AK L+  ++  +AE +LE    + P P       
Sbjct: 426 DADAARAHLDAALKADPANALAAFHLAKLLVEDDQLDEAEALLELA-MLAPRPLSERVAF 484

Query: 294 --EIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              +A ++            L RAL LE      +E++V  ++ A     + +A  +A +
Sbjct: 485 CEALALMFEEREDSRRAFEVLARALVLEPAKPLLLETVVEHAETAQAQAPLAKALKRAAM 544

Query: 351 AMKIAPRKEIFLLLAQIEQANSHN-TDKILYWTQSALHAMPD 391
           A   +    I+  LAQ+ Q    +       W +  + A  D
Sbjct: 545 AAPDSHALAIWRQLAQLLQGFLADPVGAEAAWQEVLVRAPGD 586



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 54/188 (28%), Gaps = 10/188 (5%)

Query: 107  HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLY-F 162
             S          +  + +   Q A      +   E L+ + +       R   +  L   
Sbjct: 1096 ASLARAVRMMPADAALRVTARQAAEDADSLDSYAEILQELTEEGNVGAARASLLRELADV 1155

Query: 163  ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            +  ++ D   A +     L + P      +++ + +   ++W+     L +    A E  
Sbjct: 1156 QEKKLDDKAGAVQALRALLALEPSNADCLKSLQRLHRAGEQWAELAEVLERLASVATEPA 1215

Query: 223  RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               A L  A  L      +   +        +       A++   +      + +     
Sbjct: 1216 EQVAYLREAALLHETKLANKERAAATWRTLAERDPLQREAAVALDRLYTDLGRTK----- 1270

Query: 283  LEKIWKVN 290
             E  W ++
Sbjct: 1271 -ELAWALS 1277



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 29/254 (11%)

Query: 163  ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAK 219
             +    D  +A  Y  + L    D+      +   YV  ++W+ A   +  + +K     
Sbjct: 3308 HAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERMLDIVTRKMAEKA 3367

Query: 220  EWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
               ++ A+ L     + R    A+K G    +     +S  L    +         L+  
Sbjct: 3368 IAEKDGALTLELSRQLYRLGYVAEKLGKREKALDAYEKSYGLDARYLATLESYGHLLVQA 3427

Query: 274  NKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLKRALRLEEI 320
             +   A  +L+ I  +  H E             + ++   L   +         +   I
Sbjct: 3428 KRYDDALKVLQAI--LVHHRESLTDLEVVEVYWQLGDVLAALGHSDRAQ--NHFEKALAI 3483

Query: 321  NKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +     SL  +  +  + G  ++A     + +  +    +  ++L L +I +    +   
Sbjct: 3484 DPGHEPSLRALVSLMDKAGRHEKAAELRQQLVSVVDGEAKARVYLELGEIARDKLKDPYM 3543

Query: 378  ILYWTQSALHAMPD 391
             +     AL   PD
Sbjct: 3544 AIDAFTGALKVKPD 3557



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  SA+    +AL I P       A+       K+W      L Q+ +  ++       L
Sbjct: 3242 DTGSAKTCYQQALAIDPGHLASIRALKGIQEQEKDWGGYEQTLLQEAQQTEDPQAKARAL 3301

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            L         + D   + H   + LK   +S+ A+   A   +++     AE +L
Sbjct: 3302 LDVAKYHAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERML 3356


>gi|227889873|ref|ZP_04007678.1| tetratricopeptide repeat family protein [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849737|gb|EEJ59823.1| tetratricopeptide repeat family protein [Lactobacillus johnsonii
           ATCC 33200]
          Length = 419

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 10/253 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A +
Sbjct: 62  FPKEDLFKVYLAEILLNDGDEDDGLQLLYDVKPNSDAYLESLLDLADYYQSNGLIETAHQ 121

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  ++PD   +   + +   L+ ++S A+    +  KN K +     ++L  R   
Sbjct: 122 KLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFGE---VVLSQRIAA 178

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              K        + I+S +    SI A   A   ++S N  + A   L+++ +  P    
Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 238

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A      
Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296

Query: 351 AMKIAPRKEIFLL 363
            +++AP      L
Sbjct: 297 GLEVAPDNSDLRL 309



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 69/191 (36%), Gaps = 15/191 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +       +E  +     ++      Y+ A +    + +   T     +     S R
Sbjct: 121 QKLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT-----FGEVVLSQR 175

Query: 167 IGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE 220
           I    +      +A +            +A+ +     + A +   AI +L+Q  +   +
Sbjct: 176 IAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPD 235

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +     +L  A + E+ ++ +++ +    +   +L +         AK+  + N+  +AE
Sbjct: 236 YVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLDEAE 291

Query: 281 VILEKIWKVNP 291
            +L+K  +V P
Sbjct: 292 RLLKKGLEVAP 302


>gi|149758511|ref|XP_001493438.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) isoform 2 [Equus
           caballus]
 gi|291407675|ref|XP_002720148.1| PREDICTED: O-linked GlcNAc transferase isoform 1 [Oryctolagus
           cuniculus]
 gi|296235745|ref|XP_002763024.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Callithrix jacchus]
          Length = 1036

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|300723335|ref|YP_003712638.1| hypothetical protein XNC1_2412 [Xenorhabdus nematophila ATCC 19061]
 gi|297629855|emb|CBJ90471.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 389

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 86/259 (33%), Gaps = 31/259 (11%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L+        R  A+  L  +    G  + A+    + +D +     
Sbjct: 83  GEVEKAIRIHQSLLESASLTFEQRLLAIQQLGRDYMAAGVYDRAENMFLQLVDETDFREN 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
              +++  Y    +W++AI    +  K  K   R   A      +L+     D   +   
Sbjct: 143 AFNSLLTIYQATSDWNKAIEVSEKLVKLGKHHFREDIAHFYCELALQCMGSDDFSGAIGH 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++ +   N    SI   +  ++Q +  KA  +L++I +          P +   Y HL
Sbjct: 203 LNKAAQADKNCARVSIMCGRIHMAQGEHSKATDVLKRILEQDNQLISEALPMLQECYQHL 262

Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLAMKIAP 356
              +     ++R +          E    ++++ +          D A       ++  P
Sbjct: 263 SQPDEWEAFVQRCVE---------EECGAIAELHMADIIEQKAGRDIAQTYINRQLERHP 313

Query: 357 RKEI-FLLL----AQIEQA 370
              + + L+    A  E+ 
Sbjct: 314 TMRLFYRLMDYHLADAEEG 332


>gi|149042178|gb|EDL95885.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Rattus
           norvegicus]
 gi|149042179|gb|EDL95886.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Rattus
           norvegicus]
          Length = 1046

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|32307150|ref|NP_858059.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 2 [Homo sapiens]
 gi|15680175|gb|AAH14434.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Homo sapiens]
 gi|18250914|emb|CAC86127.1| UDP-N-acatylglucosamine: polypeptide-N-acetylglucosaminyl
           transferase [Homo sapiens]
 gi|119625692|gb|EAX05287.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_c [Homo
           sapiens]
 gi|123993895|gb|ABM84549.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [synthetic construct]
 gi|124000677|gb|ABM87847.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [synthetic construct]
 gi|224487755|dbj|BAH24112.1| O-linked N-acetylglucosamine (GlcNAc) transferase [synthetic
           construct]
          Length = 1036

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|157377268|ref|YP_001475868.1| HemY domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157319642|gb|ABV38740.1| HemY domain protein [Shewanella sediminis HAW-EB3]
          Length = 389

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 126/405 (31%), Gaps = 31/405 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ Y  +I L +C           +  T  +    T     +  L  F     +L  
Sbjct: 1   MIRIMIYLGIILLGLCISPFFEGMNGYLYFTVWDYEVETGVVFAVIALIVFYGLLQILEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119
              F L+       +  K       K    G +++A  +   A K M     +       
Sbjct: 61  AIIFLLNLLFSSRLLPEKWRKKAAKKHTLIGALALAEEDWATAEKAMSKGAEKGELPALN 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAV---YSLYFESCRIGDLNSAQ 174
            L      Q     +    A ++  +  +      +         L  +    G+L+ A+
Sbjct: 121 LLAAARAAQ----HQNNTEARDEYLLQAENERLAVKAVGTTRTRYLLQQ----GELDKAR 172

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLI 230
           +   K    S     V    ++ Y    +W      L     +   + +E N        
Sbjct: 173 KELDKLSPTSKSKLPVLRLALELYQAQSDWHSLKLLLPIIKKRNLLSGEELNELIISTNT 232

Query: 231 AR--SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           +   S + + + D+  ++H    + +     +            + +   A  +L K  K
Sbjct: 233 SLLVSAQQSSEQDLEKAWHWLSRAERKEMRYLAIYCVGLNLYQRKPE---ALKLLMKQLK 289

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            +  P++ +    ++S   V + K    LE    E V   ++++K+  +      A    
Sbjct: 290 SSTSPDLLSALAEIISPADVEERKVIFSLENKYAEEVNFQILLAKLYQQNKEYRHATTYW 349

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                + P K  +L LA+ ++               A+++  +  
Sbjct: 350 QKVCNLQPDKVCWLALAESQEHLGE--------LNKAVNSYRNAA 386


>gi|139948535|ref|NP_058803.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Rattus norvegicus]
 gi|149042180|gb|EDL95887.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Rattus
           norvegicus]
 gi|149042181|gb|EDL95888.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Rattus
           norvegicus]
          Length = 1036

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 499


>gi|326918804|ref|XP_003205676.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like,
           partial [Meleagris gallopavo]
          Length = 1038

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 100 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 157

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 158 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 212

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 213 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 268

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 269 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 328

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 329 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 386



 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 293 ANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 352

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 353 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 408

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 409 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 466

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 467 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 502



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 28/223 (12%)

Query: 149 IPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKE 203
            P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       +
Sbjct: 6   EPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLD 65

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            S   + L  K+      N   A           ++G +  +      +L+L  + I   
Sbjct: 66  RSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 119

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322
           I  A +L++      A        + N  P++     + +  +    LK   RLEE    
Sbjct: 120 INLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKAC 172

Query: 323 --ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
             +++E+     V+   L       G I  A      A+ + P
Sbjct: 173 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 215


>gi|260833062|ref|XP_002611476.1| hypothetical protein BRAFLDRAFT_117202 [Branchiostoma floridae]
 gi|229296847|gb|EEN67486.1| hypothetical protein BRAFLDRAFT_117202 [Branchiostoma floridae]
          Length = 1022

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 103/301 (34%), Gaps = 21/301 (6%)

Query: 67  SCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNE 119
             P  L +  H          GY  L   L  + A ++  A + +    Q          
Sbjct: 130 QLPEALENYRHAVRLKPDFIDGYINLAAAL--VTAGDMEGAVQAYCQALQYNPDLYCVRS 187

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL+        + + A       ++       A  +L        ++  A  +  K
Sbjct: 188 DLGNLLKA-----LGRLDEAKACYLKAIETQPNFAVAWSNLGCVFNAQSEIWLAIHHFEK 242

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA     +  + +     N AI+    +    ++
Sbjct: 243 AVQLDPNFLDAYINLGNVLKEARIFDRAAVAYLRALQLSP----NHAIVHANLACVYYEQ 298

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      +++L  +   A    A +L  Q K  ++E       +++P H +  N 
Sbjct: 299 GLIDLAIDTYRRAIELQPHFPDAYCNLANALKEQGKVAESEECYNTALQLSPTHADSLNN 358

Query: 299 YTHLLSEN--TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             ++  E   T   +K   +  E+  E   +   ++ +  + G + +A      A++IAP
Sbjct: 359 LANIKREQGCTEEAVKLYCKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIAP 418

Query: 357 R 357
            
Sbjct: 419 T 419



 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  + + ++   Q    H + L  L    I   +     A +   + +   P     A
Sbjct: 333 GKVAESEECYNTALQLSPTHADSLNNL--ANIKREQGCTEEAVKLYCKALEVFPEF-AAA 389

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I+P        +       ++   A+    +  +
Sbjct: 390 HSNLASVLQQQGKLQEALMHYKEAIRIAPTFADAYSNMGNALKEMQDIQGAMQCYTRAIQ 449

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G +  +      +LKL  +   A    A  L
Sbjct: 450 INPAF----ADAHSNLASIHKDSGQIPEAIASYRTALKLKPDFPDAYCNLAHCL 499



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   + E     LQ+  T   ++ +L       G    A +   KAL++ P+
Sbjct: 326 ANALKEQGKVAESEECYNTALQLSPTHADSLNNLANIKREQGCTEEAVKLYCKALEVFPE 385

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + A  +    A           +  D+  + 
Sbjct: 386 FAAAHSNLASVLQQQGKLQEALMHYKEAIRIAPTF----ADAYSNMGNALKEMQDIQGAM 441

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A       +  +A        K+   P+  + Y +L    
Sbjct: 442 QCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIASYRTALKLK--PDFPDAYCNLAHCL 499

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 500 QIVCDWTDYNARMKKLVAIVADQLDKNRLPSVHPHH 535



 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P  P     +        + + +    N   + +       A  L   +    
Sbjct: 309 RRAIELQPHFPDAYCNLANALKEQGKVAESEECYNTALQLSPT----HADSLNNLANIKR 364

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +     ++L++      A    A  L  Q K ++A +  ++  ++ P    A+
Sbjct: 365 EQGCTEEAVKLYCKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIAPT--FAD 422

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G ++   R  +IN    ++   ++ I  + G I +A A    A+
Sbjct: 423 AYSNMGNALKEMQDIQGAMQCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIASYRTAL 482

Query: 353 KIAPR 357
           K+ P 
Sbjct: 483 KLKPD 487


>gi|15604335|ref|NP_220851.1| hypothetical protein RP472 [Rickettsia prowazekii str. Madrid E]
 gi|6647956|sp|Q9ZD72|Y472_RICPR RecName: Full=Uncharacterized protein RP472
 gi|3861027|emb|CAA14927.1| unknown [Rickettsia prowazekii]
 gi|292572088|gb|ADE30003.1| HemY-like protein [Rickettsia prowazekii Rp22]
          Length = 334

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 112/322 (34%), Gaps = 28/322 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+        +   F  + H+   V I+  +    T+ F+ + +    L +  ++  
Sbjct: 1   MFRLLLICITFLALYFGFTFIKHFDSKVVISLYDYNIETTLFLSVILGLLLLVSCFIIIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                +  PA +  M  KR  +    A+   +++ A     +  KM +    +    +E 
Sbjct: 61  FLIIIIDLPATIHIMFSKRKINHDRHAV---ILAFA--EYIIGNKMKAASIARKNLSSED 115

Query: 121 LV------YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           L         +    A      +      + ++       +A  +L          + A+
Sbjct: 116 LKDFQEFHNFILAVTAE---DIDSKISYFQKLITSKTFVFYASKNLAKLYYDKSLYDKAE 172

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWN---RNRAILLI 230
            YA KA +++         ++  Y     WS+ I   N+  K +  E+        +L+ 
Sbjct: 173 NYAIKAYNLNELDSDNLITLMHCYAKLSLWSKFIFITNKLAKFHKHEFVPKITQYYLLIA 232

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIW 287
            + +EN +  + I     AI+     D  +       +   + N K    +   IL++ +
Sbjct: 233 KQEVENNNTANAIDYLEKAIDLNFYNDELL-------EFYFNLNDKLSVNQKTKILKEAF 285

Query: 288 KVNPHPEIANIYTHLLSENTVG 309
           ++ P   +  ++  + S +   
Sbjct: 286 RIAPSLRLVQLFKKITSLSDKQ 307


>gi|118089398|ref|XP_001232519.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Gallus gallus]
          Length = 1035

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.4 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|56461661|ref|YP_156942.1| hypothetical protein IL2561 [Idiomarina loihiensis L2TR]
 gi|56180671|gb|AAV83393.1| Uncharacterized enzyme of heme biosynthesis [Idiomarina loihiensis
           L2TR]
          Length = 387

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 110/350 (31%), Gaps = 14/350 (4%)

Query: 22  SHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNY 81
           S     V + +      T+   +  +    +    ++ ++ R  LS        L  R+ 
Sbjct: 22  SGNAGYVLVQFAGVAIETTVVGLFVVTIVAIAVLSVVVSLLRRLLSKTRQGRKWLANRSE 81

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
            K       G+  +   N   A +  S   ++   +N   +  L    A   +    A  
Sbjct: 82  RKAQNIFQQGIRELLDDNPEKATESLSKAYKKSPDNN---IAALTAIAACLNKDAGKATY 138

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             +         +  +  +  E     D   A +     L+  P +  V +   + +  +
Sbjct: 139 WHDEAGAFYDNADTLLQLVSIEQSVKKDPTEADKEMRSLLEAKPHSANVLKLAYRVFKAS 198

Query: 202 KEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             W +    L + ++       E++R    +   R +    K + +          K   
Sbjct: 199 GNWQQLKELLPELRRVTDLAPAEFDRLEYQVYFERFVAEGRKSNEMLYNEWRSLPSKQRS 258

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLSENTVGKLKRA 314
           +     +  A +L        +  ++ K  K   + P    A    HL +  +   L+  
Sbjct: 259 D-ATIRLSYAAALKHLGDYEVSARVVLKGLKRGELQPA---AVNSLHLFNAKSEKLLEFV 314

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
               + + E+ + L  +++IA++      A        +I P   ++ LL
Sbjct: 315 QAQLKQDPENRDYLYALAQIAMDNQDFSLAQRALKKLAEIEPSSHVYRLL 364


>gi|300868209|ref|ZP_07112841.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
 gi|300333833|emb|CBN58025.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
          Length = 1545

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 93/253 (36%), Gaps = 21/253 (8%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQR 175
            +     +L  +  LA+ ++  A       LQ  P    + +    F++   G +  A+ 
Sbjct: 291 EDPEAYNIL-AEGYLAQGKFPQAIAACRRSLQLKPDAAIYKLLGNAFQAM--GKVEDAKN 347

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              KAL+I+P+       +   Y   ++W  AI    +      ++    A      +  
Sbjct: 348 CYLKALEINPNFAEAYANLGSLYGGQQQWQSAIAAFQKAIAIKPDF----AGAYRNFAKL 403

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILEKIWKVNP-- 291
            A  G    +      +  L  +   A   I  AK+ + Q K  +      +  ++NP  
Sbjct: 404 WAQVGKPQEAAECWYRAFNLDPSKATADEYINLAKTFLEQGKVEQGIDCYRRGLELNPSS 463

Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               H E+A I  +    E +V   +RA+ L   N +   S   ++   +++   ++A  
Sbjct: 464 SWGYH-ELAEILKNQEKWEESVAFYRRAIEL---NPDHSWSHNNLADALMKLEQWEEAVP 519

Query: 347 KAMLAMKIAPRKE 359
             + A+K+ P   
Sbjct: 520 AYLSAIKLNPDHS 532



 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 13/209 (6%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             +I L++ +   A    E  L++      A+ +L       G +  A+ +  KA+ I P
Sbjct: 17  RAEIYLSQGKVEEAIAACEQALKVKPDFAQALKTLGNALQAQGRVEEARHWYAKAIQIQP 76

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +       +   Y   ++WS AIT   +       +    A +    +   A  G    +
Sbjct: 77  NFAEAYANLGSIYAAEQKWSEAITHYQKAIALKPNF----AGVYRNLAKVLAQMGKDAQA 132

Query: 246 YHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
                ++  L      A        SL+ Q K ++A     +  K+N  P +A  Y +L 
Sbjct: 133 QDCWYQAFTLEPEKATAEEHLNLGNSLLQQQKLQEAVNCYSRAIKLN--PNLAQAYQNL- 189

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVS 332
                  LK+A  LE+      +++ + +
Sbjct: 190 ----GDALKQAGNLEQAAPYYRKAIELKA 214



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 90/287 (31%), Gaps = 39/287 (13%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +  L + +     +     L++  +  +  + L            +  +  +A++++PD
Sbjct: 437 AKTFLEQGKVEQGIDCYRRGLELNPSSSWGYHELAEILKNQEKWEESVAFYRRAIELNPD 496

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             W    +    +  ++W  A+       K   +   + +   +  +L   ++ +  A  
Sbjct: 497 HSWSHNNLADALMKLEQWEEAVPAYLSAIKLNPD--HSWSHNNLGDALVKLERWEEAAEA 554

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------------- 291
           +      K                 SQN    A + LE+ W+                  
Sbjct: 555 YAGANQAKND------------FFWSQNNLADALMKLER-WEEAAAAYQQAIELNADHFG 601

Query: 292 -HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            H  +A     L   E  +   +RA+ L   N +   S   +    +E+   +++     
Sbjct: 602 THSNLAEALVKLEDWEGAIAAYRRAIEL---NPDFFWSHNNLGDALIELERWEESVPVYR 658

Query: 350 LAMKIAPRK--EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
            A+++ P      + L   +E     +     Y  + A    PD  W
Sbjct: 659 RALELNPDFAWAHYNLGQALEHQEEWDEAIASY--RRAAEIQPDLPW 703



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A Y+L        + + A     +A +I PD PW+ + +        +W   +   ++  
Sbjct: 670 AHYNLGQALEHQEEWDEAIASYRRAAEIQPDLPWLPQKLADAIRQRAQWD--LEAASKLY 727

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           + A E+N                  D +  YH A+E      +     +  A +L+ Q 
Sbjct: 728 REAIEYN-----------------PDDVQLYHKALEIAPNDADLY---VGLADALVRQG 766



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 7/136 (5%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+    R+     +G +  +     ++LK+  +   A      +L +Q +  +A     K
Sbjct: 11  AVHFNQRAEIYLSQGKVEEAIAACEQALKVKPDFAQALKTLGNALQAQGRVEEARHWYAK 70

Query: 286 IWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGS 340
             ++   P  A  Y +L S     +     +    +   +          ++K+  +MG 
Sbjct: 71  AIQIQ--PNFAEAYANLGSIYAAEQKWSEAITHYQKAIALKPNFAGVYRNLAKVLAQMGK 128

Query: 341 IDQAHAKAMLAMKIAP 356
             QA      A  + P
Sbjct: 129 DAQAQDCWYQAFTLEP 144


>gi|126342739|ref|XP_001362317.1| PREDICTED: similar to UDP-N-acetylglucosamine:
           polypeptide-N-acetylglucosaminyl transferase isoform 2
           [Monodelphis domestica]
          Length = 1035

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|149923554|ref|ZP_01911954.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149815573|gb|EDM75105.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 1329

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 12/170 (7%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-------QIPAT 152
              A K +       + ++E L  +    +   +  ++ A +  + +L           T
Sbjct: 652 GEKALKRYKSAYDIDSTNHEVLTGM--ADLLFEQENWDRAFKLYQTILVQHRDSQSDDDT 709

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  L     R  +   A  Y  KAL++ P    V EAV++    A +W   I    
Sbjct: 710 VLVYYR-LGTVKRRQNEPRKALNYMEKALEVQPFNRQVLEAVIELQSAANDWEGVIQA-K 767

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMI-ASYHDAIESLKLCDNSIM 261
           +   +  E +  R  L         +K D    +    +++L L      
Sbjct: 768 RALVDVVESDDERFDLYKEIGELYTEKLDNKTKAGEAYMQALDLRPTDFP 817



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 43/122 (35%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            ++ D++ +     + L++ P+       + +     ++W  A+  +++      +    
Sbjct: 428 KQVEDVDRSIECYREILELDPNHFDAANTLSRLQEAIEDWPSAVETMDRLVGLNDDPQAR 487

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +L     +      D   +     ++L L    + A I  A+   S+    KA   L+
Sbjct: 488 LELLTRMGRVFFQKLDDQPEAERRLNDALTLDPGHVPALIILAEIYKSRGDWLKAARTLQ 547

Query: 285 KI 286
             
Sbjct: 548 SA 549


>gi|94267014|ref|ZP_01290659.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93452288|gb|EAT02929.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 585

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 67/233 (28%), Gaps = 10/233 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + ++ + A    Q  +A +     L+        + +L            A  +  +  +
Sbjct: 60  HFIQAERAKLAGQLELARQAYRQALRCDPLALPVMRNLAMLLLASEQRQEAIEWLQRMAE 119

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P    +   +   Y  A +  +A     +             +L    + +   +  +
Sbjct: 120 LRPGETEIHSLLANLYAAAGQPDKAAAIYRKILAAEPGNANVTLLLATLYARQERRQDAL 179

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPEIANI 298
           +   +  ++         MA    A+          A    E+     W      E A  
Sbjct: 180 VMLENLVLQQ----PEMAMAHFYLARLHRELGDLPAALAAYERALALQWSAAMAREAAET 235

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           Y          +L R  ++   N     +  +++ I L +  +D+A  +    
Sbjct: 236 YEMAGRYEESLRLYR--QVVAENPADERTRGLLANIYLRLERVDEALDELAEL 286


>gi|27499606|gb|AAO17363.1| O-linked GlcNAc transferase [Mus musculus]
          Length = 1046

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 73/224 (32%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD       +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGALLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509


>gi|78222447|ref|YP_384194.1| intermediate filament protein [Geobacter metallireducens GS-15]
 gi|78193702|gb|ABB31469.1| Intermediate filament protein [Geobacter metallireducens GS-15]
          Length = 573

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 11/167 (6%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +   L  ++  A+T LN       E + N A L  A +      G +  +      ++++
Sbjct: 54  RLRELDGDFEGALTLLNGAI----EADPNSAFLHTAAAEIYLKSGKLDDALRACENAIRV 109

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGK 310
                 A I A   L +  + ++A V L K  +++P  E  + Y HL      + +    
Sbjct: 110 DPGFRPARIIAGTILANLKRDKEAIVHLSKAIELDPTKE--DAYLHLAISYVRTFDYEQA 167

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +     L +IN ES      + K   +M    +A      A++I P 
Sbjct: 168 VNTLKSLIKINPESSLGYYYLGKTYDQMKLQKEAANYYKKAIEIKPD 214



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 15/224 (6%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
               +  + I  +R   +YSL       GD   A      A++  P++ ++  A  + Y+
Sbjct: 32  EHSFQPTVNIAGSRALYIYSLSRLRELDGDFEGALTLLNGAIEADPNSAFLHTAAAEIYL 91

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + +   A+       +    +   R I     +    DK     +     ++++L    
Sbjct: 92  KSGKLDDALRACENAIRVDPGFRPARIIAGTILANLKRDK----EAIVHLSKAIELDPTK 147

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
             A +  A S +      +A   L+ + K+NP   +   Y       T  ++K       
Sbjct: 148 EDAYLHLAISYVRTFDYEQAVNTLKSLIKINPESSLGYYYL----GKTYDQMKLQKEAAN 203

Query: 320 INKESVESLVIVSKIALE-------MGSIDQAHAKAMLAMKIAP 356
             K+++E      +  ++       +G  D A A     ++  P
Sbjct: 204 YYKKAIEIKPDFEQAIIDLGISQEGLGLYDDAIATYKRLLETNP 247


>gi|54309612|ref|YP_130632.1| tetratricopeptide repeat protein [Photobacterium profundum SS9]
 gi|46914050|emb|CAG20830.1| putative N-acetylglucosaminyl transferase [Photobacterium profundum
           SS9]
          Length = 389

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 17/244 (6%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +    G L+ A++   + LD  PD   
Sbjct: 83  GEVDRAIRIHQNLIARPNLTIDQRNLALQQLAKDYMAAGFLDRAEKIFEQLLD-EPDHRK 141

Query: 190 -VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYH 247
              + ++  Y   +EW +AI   NQ  K  K   ++  A      ++      +   +  
Sbjct: 142 GALQQLLSIYQQTREWEKAIEMANQLVKMGKPKLKHDIAHYWCELAMLEIGAQNQDKAKQ 201

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTH 301
              ++L    N + AS+  A+ LI     + A   LE++      +     P +   Y  
Sbjct: 202 CLKKALSADKNCVRASLTMARILIKAGDYKAASKQLERVTEQEIDFVGEALPLLLQCYEA 261

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EI 360
             +E+  G LK      ++   S   L++  +I    G+I  A       +   P     
Sbjct: 262 TNNES--GWLKYLQHCVDMKAGSTAELMLADEICKREGAI-LAQTFMTRQLTKNPTMKGF 318

Query: 361 FLLL 364
           + L+
Sbjct: 319 YQLM 322


>gi|124024098|ref|YP_001018405.1| hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964384|gb|ABM79140.1| Hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT
           9303]
          Length = 622

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 104/304 (34%), Gaps = 47/304 (15%)

Query: 117 HNEYLVYLLEVQIAL-AERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNS 172
           + E ++  L+  +AL  + + + A      +L +     +A+     +  E  R  D   
Sbjct: 2   NQEEIMQQLQAAVALHNQGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDD--- 58

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQK-------------K 215
           A    + A+   P  P     +   +  A+ W  AI      L+ K              
Sbjct: 59  AITLLSSAVSAQPGNPDANYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICL 118

Query: 216 KNAKEWNRNRAILLIARSLE-------------NADKGDMIASYHDAIESLKLCDNSIMA 262
           K  +++  +  +L  A S +               ++     +      ++++  +   A
Sbjct: 119 KETEQYEHSEIVLKRAISRQPRFAAAWLNLGNTLKEQKKYSEAIVSYRNAIEVKPDFAEA 178

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRL 317
            +     L  + +  +A V   K  +V   P+ A  Y  L             +      
Sbjct: 179 YLNLGNVLKEEGEVEEAIVSYRKAIEVK--PDCAGAYFSLGLVLKGEGEVEEAIVSYRNA 236

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI--EQANSHN 374
            E+  +  E+ + +  +  E G +++A A    A+++ P   + FL L  +  E+    +
Sbjct: 237 IEVKPDFAEAYLNLGYVLKEEGDVEEAIASYRKAIEVKPDFVKAFLGLGAVLTEKGEIDD 296

Query: 375 TDKI 378
             ++
Sbjct: 297 ARQV 300



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G++  A     KA+++ PD      ++        E   AI       +   ++   
Sbjct: 187 KEEGEVEEAIVSYRKAIEVKPDCAGAYFSLGLVLKGEGEVEEAIVSYRNAIEVKPDF--A 244

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L +   L+  ++GD+  +     +++++  + + A +     L  + +   A  ++ 
Sbjct: 245 EAYLNLGYVLK--EEGDVEEAIASYRKAIEVKPDFVKAFLGLGAVLTEKGEIDDARQVVS 302

Query: 285 K 285
            
Sbjct: 303 A 303


>gi|196232942|ref|ZP_03131791.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196222920|gb|EDY17441.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 743

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 13/231 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +   A      +L        A   L   + + G L +A++   KA+  +        
Sbjct: 64  SGRLVEAENLYTQVLAREPNHPEANRLLGIIAMQTGHLEAARQLLGKAIAGNDQHALAYS 123

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + Y    +   AI    +  +    +    A +L    +  A  G+   +     E+
Sbjct: 124 NLGEVYRALGQPREAIEAFRRALQIGPVY----AEVLSNLGIALATVGETTEAISRFREA 179

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHL-LSEN 306
           L++  +   A      +L  Q    +AE       ++ P  P+    + N+   +   E 
Sbjct: 180 LQIRPDFPEAQNNLGNALQQQGSLAEAEECYRAALRLRPDFPDASNNLGNVLLEMGRPEE 239

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            V   +RAL L         +   +      +G +D++ A    A+++ PR
Sbjct: 240 AVACHRRALEL---RPSYPGAWNSLGNACGAIGGVDESVAAYREAIRLDPR 287



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 6/206 (2%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL  G     +  +  A  +++ V  +   ++     LL + IA+       A + L  
Sbjct: 53  EALALGTQLHQSGRLVEAENLYTQVLARE-PNHPEANRLLGI-IAMQTGHLEAARQLLGK 110

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            +        A  +L      +G    A     +AL I P    V   +        E +
Sbjct: 111 AIAGNDQHALAYSNLGEVYRALGQPREAIEAFRRALQIGPVYAEVLSNLGIALATVGETT 170

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            AI+   +  +   ++    A   +  +L+   +G +  +      +L+L  +   AS  
Sbjct: 171 EAISRFREALQIRPDFP--EAQNNLGNALQQ--QGSLAEAEECYRAALRLRPDFPDASNN 226

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291
               L+   +  +A     +  ++ P
Sbjct: 227 LGNVLLEMGRPEEAVACHRRALELRP 252


>gi|319427909|gb|ADV55983.1| HemY domain protein [Shewanella putrefaciens 200]
          Length = 388

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 128/384 (33%), Gaps = 32/384 (8%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLFAVSRFFLSC-PAMLFHMLH 77
            +      V IT G+    TS    +  L  F   + +L + V         +       
Sbjct: 20  WLVGNTGYVYITAGDYQIETSLVFGVIALIVFYAVFQVLEWLVITAINLILRSRFIPYHW 79

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIAL--AER 134
           +R   K +  +  G +++A  + P A R M              L      Q     AER
Sbjct: 80  RRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPALNLLAAARAAQYQQKIAER 137

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
              +     + +     T   A Y L     + G+L  A+    K    S     V +  
Sbjct: 138 DQYLDRAATQPLAANAVTTTRARYLL-----KQGELALARVELDKLSPTSKSKAPVLKLA 192

Query: 195 VQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI------- 243
           +  Y   ++W            ++  + +++N    +   A     A K +         
Sbjct: 193 LDLYQAQQDWDALKLLLPILKKRQLIDDEKFNELNIVTHCALLKAAATKSEAALEECWQW 252

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            S  +  +S  L           A +L   N+K +A  +L K  +  P   +  +   + 
Sbjct: 253 LSRSERNQSEYLA--------IYAIALCRLNRKDEAMKLLLKKLRSAPDTALLKVIPDIT 304

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           +   +   K+ L+ E  ++ + +  + ++K+  +   + +A        ++ P K+ +L 
Sbjct: 305 TAQDMDIRKQLLKYEVTHENNADYQICLAKLYQQTREMKEAKTCWQNVCRLEPTKDAWLA 364

Query: 364 LAQIEQANSHNTDKILYWTQSALH 387
           LA+I++             + A +
Sbjct: 365 LARIQE-QLGEQGYANQSYRQAAN 387


>gi|157368400|ref|YP_001476389.1| cellulose synthase subunit BcsC [Serratia proteamaculans 568]
 gi|157320164|gb|ABV39261.1| cellulose synthase operon C domain protein [Serratia proteamaculans
           568]
          Length = 1157

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 11/198 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL      +A +K +   Q   T   AV  L   +    D  +A+R+  +AL + P +  
Sbjct: 364 ALKAGNLALAQQKYQQARQFDNTDSSAVIGLGDVAVARKDDAAAERFYQQALRLDPGSGS 423

Query: 190 VTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
               +V  Y       +A+ +LN     Q+ K        +  +L  ++ + A +     
Sbjct: 424 AVRGLVNIYQRQSP-EKALAYLNSLPRSQQNKMRSTLEGLQLDMLKQQAEQLAQQKQWHQ 482

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYTHLL 303
           +      + ++  + +  +   A++L    +  +A+ +  +   K   +P++   Y   L
Sbjct: 483 AAEKYRRAQQMDPDDVWLTYHYAQTLRQAGQPEQADALFSRLAQKQRGNPQLTYAYALYL 542

Query: 304 SENTVGKLKRALRLEEIN 321
           S +   +      L ++N
Sbjct: 543 SGSDRDQ----QALAQLN 556



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 100/334 (29%), Gaps = 76/334 (22%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A N+ LA++ +    Q     +  ++ L    +A+A +    A    +
Sbjct: 355 WLAVDEGDKALKAGNLALAQQKYQQARQFDNTDSSAVIGL--GDVAVARKDDAAAERFYQ 412

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRY------------------------ATKA 180
             L++      AV  L     R      A  Y                          +A
Sbjct: 413 QALRLDPGSGSAVRGLVNIYQRQS-PEKALAYLNSLPRSQQNKMRSTLEGLQLDMLKQQA 471

Query: 181 LDISPDAPWVTEAVVQQYVLAKE----W-----------------SRAI-TFLNQKKKNA 218
             ++    W   A   +     +    W                 + A+ + L QK++  
Sbjct: 472 EQLAQQKQWHQAAEKYRRAQQMDPDDVWLTYHYAQTLRQAGQPEQADALFSRLAQKQRGN 531

Query: 219 KEWNRNRAILLIA-----RSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLIS 272
            +     A+ L       ++L   +         +  E + +L      A++  A+ L +
Sbjct: 532 PQLTYAYALYLSGSDRDQQALAQLNTLPSAQWNDNMRELAQRLKMQ---ATLEHAERLRA 588

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANI--------YTHLLSENTVGKLKRALRLEEINKES 324
              +  A   L        H + A+         +     +     L    R+      +
Sbjct: 589 AGDEPGAVAYL--------HRQPADTRIDLQLADWALARGDYDAA-LADYQRVRVREPNN 639

Query: 325 VESLVIVSKIALEMGSIDQAHAKAM-LAMKIAPR 357
            ++ +   +  +  G +++A  +    A +  P 
Sbjct: 640 PDARLGEIEAYVAQGKLNEARQRLQTKAPEPTPS 673



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 12/140 (8%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L   +   A      A   L                L   +   GD ++A     +    
Sbjct: 580 LEHAERLRAAGDEPGAVAYLHRQPADTRIDLQ----LADWALARGDYDAALADYQRVRVR 635

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK--------KNAKEWNRNRAILLIARSLE 235
            P+ P      ++ YV   + + A   L  K            +E N   A+    ++ +
Sbjct: 636 EPNNPDARLGEIEAYVAQGKLNEARQRLQTKAPEPTPSGNSERREANAWYAVGEPQKATD 695

Query: 236 NADKGDMIASYHDAIESLKL 255
              +    A    A +S  L
Sbjct: 696 IFTRLKTAAQSEPASQSKAL 715


>gi|195429292|ref|XP_002062697.1| GK19554 [Drosophila willistoni]
 gi|194158782|gb|EDW73683.1| GK19554 [Drosophila willistoni]
          Length = 1025

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 14/217 (6%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A +   +AL+ +P   W    +          +       Q  +++K +     + L
Sbjct: 609 QEKALQLFRRALEQNPRNLWAANGIGAALCAGGLLNEGEAVFKQILESSK-YCTQSLLNL 667

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              SLE          Y   ++   L   S+      A+SL    K ++A+ +L +   V
Sbjct: 668 ANVSLELKKYKQASQMYKQCLDDF-LPPKSVAIMQLLARSLYLGGKAKEAKFVLLQARHV 726

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID--QAHAK 347
            PH ++  +Y   ++          +       +  E ++   ++ + +   D   A   
Sbjct: 727 APH-DLILLYNLAVTIKQYS----LMVFGMQRPDLKELMLAEQELKVALRYFDGLVASKY 781

Query: 348 AMLAMKIAPRKEIFLL-----LAQIEQANSHNTDKIL 379
              A + A +    LL     L ++ +    + D++ 
Sbjct: 782 ERQAQRQAKKCRAILLDLPEELNRVREQEQLDEDRVR 818


>gi|154302443|ref|XP_001551631.1| hypothetical protein BC1G_09798 [Botryotinia fuckeliana B05.10]
 gi|150855287|gb|EDN30479.1| hypothetical protein BC1G_09798 [Botryotinia fuckeliana B05.10]
          Length = 927

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 108/331 (32%), Gaps = 49/331 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIP 150
           SI       AR +++Y  +           L     A  E+ +       +++   ++  
Sbjct: 538 SINRGKYETARAIYAYALRVFVTS----TKLWLA-AADLEKNHGTKEALWQLLEKAVEAR 592

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T E     L  E    G++++A+R   KA + +P+   +  A V+      +  +A   
Sbjct: 593 PTSEVLWMMLAKEKWLAGEVDNARRVLGKAFNQNPNNEEIWLAAVKLEAENNQPEQAREL 652

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENAD-----------------------------KGD 241
           L   ++ A         +   R L N D                             +G 
Sbjct: 653 LKTARQEAPTDRVWTKSVAYERQLGNIDAALDLANQGLNLFPGAAKLWMMKGQIYEGEGK 712

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300
           M  +        K C  S+   +  ++         KA  +L++     P  PE+     
Sbjct: 713 MPQAREAYSTGTKACPKSVPLWLLYSRLEERAGMVVKARSVLDRARLAVPKSPELWTESV 772

Query: 301 HLL---SENTVGKLKRALRLEEINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIA 355
            +    +     K+  A  L+E+      S ++ ++    LE  +  +  A      K+ 
Sbjct: 773 RVERRANNTAQAKIMMAKALQEV----PNSGLLYTESIWNLEARTQRKPRA-LEAIKKVD 827

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
               +F+ +A+I        +K   W + A+
Sbjct: 828 NDPILFVTIARIFWGERR-LEKAQNWFEKAI 857



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 7/150 (4%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  + ++G    +      +L++   S    + AA    +   K     +LEK  +  P 
Sbjct: 535 AKASINRGKYETARAIYAYALRVFVTSTKLWLAAADLEKNHGTKEALWQLLEKAVEARPT 594

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            E     +A         +   ++    +    N  + E  +   K+  E    +QA   
Sbjct: 595 SEVLWMMLAKEKWLAGEVDNARRV--LGKAFNQNPNNEEIWLAAVKLEAENNQPEQAREL 652

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
              A + AP   ++      E+   +    
Sbjct: 653 LKTARQEAPTDRVWTKSVAYERQLGNIDAA 682


>gi|251771762|gb|EES52337.1| probable TPR-domain containing protein [Leptospirillum
           ferrodiazotrophum]
          Length = 1079

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/388 (12%), Positives = 115/388 (29%), Gaps = 93/388 (23%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL   L++           M ++        N+ L  L   +  +       A   L  +
Sbjct: 587 ALGETLLA----ENQKEPAMQAFRKALELNPNQPLALLELGRAEVLSGDARGALTHLAPL 642

Query: 147 LQIP-----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           ++ P       +   ++ L  +    G+   A     KA+ + P      E + + +   
Sbjct: 643 VKAPFPKPQQAQIQWLWGLANQ--SAGNDQVALDGLQKAVSLDPGVASYRETLGEFWSNR 700

Query: 202 KEWSRAITFLNQKK----------------------------------KNAKEWNRN--- 224
             W +A+  L + +                                  + A ++ R+   
Sbjct: 701 SRWDKALPELEKSQSLDPKNALLALEIAWGKVKTSKGTPDTAQLERVVRRASDYERSHPN 760

Query: 225 --RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAE 280
             R+ L+ A++     K D   + +D +    L      A++    A  L+   K  +A 
Sbjct: 761 DLRSALIEAQADLLLKKNDRALAVYDRL----LASQPSNAALLYGKAALLLGNGKVDEAR 816

Query: 281 VILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            ++ K+   +P+     +          N  G +    R+      +VE  + +++  L 
Sbjct: 817 KLVRKLLADHPNNLGANLLMAQIDQRKNNVRGMVDHLERVHRTLPSAVEPALALAQADLS 876

Query: 338 MGSIDQAHAKAMLAMKIAP--RKEIFLL-------------------------------- 363
           +G  ++A + A    +  P   + ++L                                 
Sbjct: 877 LGRFEEAKSVAFSLYEGHPGLYQALYLKASAEMGLKEYRHAVRDFVTLSRHDKNPGAMLN 936

Query: 364 LAQIEQANSHNTDKILYWTQSALHAMPD 391
           +A +      +      +   A  + P 
Sbjct: 937 MASVAAGKMGDEAASRQYLDKAFRSDPG 964



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 103/321 (32%), Gaps = 45/321 (14%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL +  +   + N  L   +    +   +  +E  + LL     L   +   A +    
Sbjct: 480 EALESLYLVTLSANKKLPEAIGEGEAYLKSHPSEQNIRLLLADFDLQAGKQRKAMDLYRQ 539

Query: 146 MLQIPATREFAVYSL---------YFES-------------------------CRIGDLN 171
           +L +      A+  L         Y E+                                
Sbjct: 540 ILSVDPKNVQALTDLANLEFRQKKYAEAESYDRRALREVPDNPNLETALGETLLAENQKE 599

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A +   KAL+++P+ P     + +  VL+ +   A+T L      A      +A +   
Sbjct: 600 PAMQAFRKALELNPNQPLALLELGRAEVLSGDARGALTHL-APLVKAPFPKPQQAQIQWL 658

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             L N   G+   +     +++ L            +   ++++  KA   LEK   ++P
Sbjct: 659 WGLANQSAGNDQVALDGLQKAVSLDPGVASYRETLGEFWSNRSRWDKALPELEKSQSLDP 718

Query: 292 HPEIAN---IYTHLL-----SENT-VGK-LKRALRLEEINKESVESLVIVSKIALEMGSI 341
              +      +  +       +   + + ++RA   E  +   + S +I ++  L +   
Sbjct: 719 KNALLALEIAWGKVKTSKGTPDTAQLERVVRRASDYERSHPNDLRSALIEAQADLLLKKN 778

Query: 342 DQAHAKAMLAMKIAPRKEIFL 362
           D+A A     +   P     L
Sbjct: 779 DRALAVYDRLLASQPSNAALL 799



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 77/252 (30%), Gaps = 7/252 (2%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            L+E + N A  + + +L++          L     + G    A     +     P +  
Sbjct: 49  YLSEGKVNEAIIEFQNVLKVNPKSVKGRLGLADAYMKKGWTTQAVLEYREVSKEDPLSLP 108

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+ +  V + +W+     +    K       N    L          G    +  + 
Sbjct: 109 AHLAMARYGVNSGQWTAVEPEIAAVLKIDP----NNVEGLTFEGERQLALGHQKEAEDNF 164

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSEN 306
            ++L L   S+ A +        +N   KA    ++    +P    A     Y       
Sbjct: 165 RKALALSPGSVPALVGMGDLFRKENLADKASSFYQQALAKDPSNGRALTGLGYLAQTQGK 224

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           T    +   +  E +K  + S +I +      G + +A        K A    I + +A+
Sbjct: 225 TDEAKENFQKAMEADKGDLRSRIIYTNFLAGQGKVQEAIDLLKAVPKKAADLRIPVKIAE 284

Query: 367 IEQANSHNTDKI 378
            E     N   I
Sbjct: 285 YEVLLGQNAKAI 296



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/265 (10%), Positives = 79/265 (29%), Gaps = 14/265 (5%)

Query: 100  IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              L R +      + +  N+    L+E Q  L  ++ + A    + +L    +    +Y 
Sbjct: 742  AQLERVVRRASDYERSHPNDLRSALIEAQADLLLKKNDRALAVYDRLLASQPSNAALLYG 801

Query: 160  LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
                    G ++ A++   K L   P+       + Q           +  L +  +   
Sbjct: 802  KAALLLGNGKVDEARKLVRKLLADHPNNLGANLLMAQIDQRKNNVRGMVDHLERVHRTLP 861

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                      +A +  +   G    +   A    +       A    A + +   + R A
Sbjct: 862  SAVEP----ALALAQADLSLGRFEEAKSVAFSLYEGHPGLYQALYLKASAEMGLKEYRHA 917

Query: 280  EVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVES----LVIV 331
                  + + + +P     +A++    + +    + +   +    +  +          +
Sbjct: 918  VRDFVTLSRHDKNPGAMLNMASVAAGKMGDEAASR-QYLDKAFRSDPGNPSVLNNLAFSL 976

Query: 332  SKIALEM-GSIDQAHAKAMLAMKIA 355
            ++   ++  ++D A      A    
Sbjct: 977  AERNADLPRALDLARKALAKADTPD 1001


>gi|302038729|ref|YP_003799051.1| hypothetical protein NIDE3440 [Candidatus Nitrospira defluvii]
 gi|300606793|emb|CBK43126.1| conserved protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 561

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 96/273 (35%), Gaps = 11/273 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           +LL  Q A  +++  +A ++ +  +   PA+       L       GD+ SA R+A +  
Sbjct: 13  FLLGYQ-AELDQETELAIKEYQLALQTDPASNYLKAR-LAVLYFTAGDVPSAVRFADEVA 70

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           D+      +   +   Y  A +  +A+   N+  +        R+    A+ L  A++  
Sbjct: 71  DVPGLDAQMLGQIGGMYAAAGKPEKALRLFNRAIEQEP----QRSEHFFAKGLLQANQKQ 126

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
            + +       +K+  +S +      +  +      KA    E+   +NP  E A +   
Sbjct: 127 YVEAEDTIRAGIKISPDSAVGYYYLGRIGVEARDFDKATTHFEQAVALNPAFEPAYVALG 186

Query: 302 LLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            + E    + K        L+ +N ++ +    + ++ +     D A  +    +   P 
Sbjct: 187 SVYEAKQDRDKAIGIYRRYLQGVNPKNRDIRHHLIRLQVSAKQYDDALRELQEMLAEDPS 246

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                L   +      +  K +   +  L   P
Sbjct: 247 DLDAQLRMGLVYGEQKDYPKAIQQLKQILTVRP 279



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 86/274 (31%), Gaps = 14/274 (5%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEY--LVYLLEVQIALAERQYNIAHEKLEMMLQ 148
           G M  AA     A ++ +   +Q    +E+     LL+      ++QY  A + +   ++
Sbjct: 84  GGMYAAAGKPEKALRLFNRAIEQEPQRSEHFFAKGLLQAN----QKQYVEAEDTIRAGIK 139

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           I        Y L        D + A  +  +A+ ++P       A+   Y   ++  +AI
Sbjct: 140 ISPDSAVGYYYLGRIGVEARDFDKATTHFEQAVALNPAFEPAYVALGSVYEAKQDRDKAI 199

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               +  +     NR+    LI              +  +  E L    + + A +    
Sbjct: 200 GIYRRYLQGVNPKNRDIRHHLI---RLQVSAKQYDDALRELQEMLAEDPSDLDAQLRMGL 256

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KES 324
               Q    KA   L++I  V P       Y   L E T             N       
Sbjct: 257 VYGEQKDYPKAIQQLKQILTVRPTELKVRDYLGYLYEETKDYANAMEA-YRYNLTLEPSY 315

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            E  + +  +        +A      A  + P++
Sbjct: 316 FEGHLHLGVLQYRTKQYAEAIQHLREASLLNPKQ 349



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 90/278 (32%), Gaps = 27/278 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
               + Y  A E     L +  +       L     R      A ++  +A  ++P  P 
Sbjct: 292 YEETKDYANAMEAYRYNLTLEPSYFEGHLHLGVLQYRTKQYAEAIQHLREASLLNPKQPE 351

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   +   +++  ++    +  ++  +            + +  ++ D +      
Sbjct: 352 AHIVLGLSHFQVEQYEPSLQAFQEGIRHNPD--NADLHFNAGTAYDKLNRFDEVV--KSM 407

Query: 250 IESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPH-----PEIANIYTH-- 301
             +L L  +   A      S   +  K  +A  + ++   + P        +A  +    
Sbjct: 408 QTTLALDPHHADAMNYLGYSYAERGVKIEEAIALTKQAVALRPTNGYYVDSLAWAFFKKG 467

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           LL+E  + ++KRA+ L   +    E    + +I L+   +       + ++++ P     
Sbjct: 468 LLAE-AMAEMKRAVALVGDDPVIYEH---LGEIYLKQQHLSDGREALLHSLELDP--SND 521

Query: 362 LLLAQIEQANSHN---TDKILYWTQS------ALHAMP 390
            L+ +  +    +    ++I    +       A  A  
Sbjct: 522 KLMQRFRELGLGDPAKEERIRQALRRVSDRKSATSAPA 559


>gi|301060056|ref|ZP_07200929.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300445819|gb|EFK09711.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 751

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 81/258 (31%), Gaps = 8/258 (3%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L+  I      Y  A      +L        A  +L     R  +   A++   + ++  
Sbjct: 377 LKADIKATNGDYAEAISDYRYVLDEEPGNLRAAMNLAKAHMRNSEPMLAEQTYKRIVEQD 436

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P A      +   Y    +   A   L        +  R     L         + D+ A
Sbjct: 437 PSAVEARLDLADYYAGKGKPDLAKEMLEAVLTIDPDNRR----ALSGMGNLAMRQKDLPA 492

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTH 301
           +        K   ++           +++NK  +A  + EK   +NP  E A    +   
Sbjct: 493 AQSYVDRLSKTEPDAANTYYQKGLLKLAENKPDEAADLFEKALNLNPDFEGALFRLLTIR 552

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360
           +  +     ++R  +      ++    V + ++        QA      A++I P  ++ 
Sbjct: 553 MNKDGIESAIERCRQQIRQRPDNYRYYVFLGRLYGTQKDYAQATQSFEKALEINPDSQDA 612

Query: 361 FLLLAQIEQANSHNTDKI 378
              LA++EQA       I
Sbjct: 613 LFGLARVEQAMGSIDGAI 630



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 90/283 (31%), Gaps = 50/283 (17%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATK 179
             +L  ++A  ++    A ++ + +++      +      L     R  +   A+   T+
Sbjct: 203 ARMLLAELAEKQKDLKAAEKQYQKLVETGGEPFKLL----LSQFYARNNEDAKAEDILTE 258

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            +   P+      A+        +    +  L +  K   E  +   +L    SL   ++
Sbjct: 259 LIKAHPEKISYRLALAAFLKSKGQRQAMLEVLERCIKENPEAYKPCEML----SLAYLEE 314

Query: 240 GDMIASYHDA---IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291
           G    +       +E +K     + A +  A     + K  +A  ++ ++   NP     
Sbjct: 315 GHYDEALQVMDGFMERVKTGPEFLQAKLVKATIYFKEKKMDEALKLVREVLDENPRDVKA 374

Query: 292 HPEIANI------YTHLLS------ENTVGKLKRALRLEEINKESVESLVI--------- 330
           H   A+I      Y   +S      +   G L+ A+ L + +  + E ++          
Sbjct: 375 HALKADIKATNGDYAEAISDYRYVLDEEPGNLRAAMNLAKAHMRNSEPMLAEQTYKRIVE 434

Query: 331 ----VSKIALEMGSI-------DQAHAKAMLAMKIAPRKEIFL 362
                 +  L++          D A       + I P     L
Sbjct: 435 QDPSAVEARLDLADYYAGKGKPDLAKEMLEAVLTIDPDNRRAL 477



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 67/196 (34%), Gaps = 15/196 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G+   A+     AL I P        + +  +  +    A    ++      +     
Sbjct: 43  EKGEYIKARLEFKNALQIDPKFAEAYYMLGRVEMKTENPKGAFGAFSKAVSLNPD----- 97

Query: 226 AILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            +L    SL         +  +   A   L+       A +  A  LI+  K ++ E IL
Sbjct: 98  -LLEAQISLGRILFAAKQIEKAKEKAELVLEKKPGDTDALLLKAACLIASEKTKEGEAIL 156

Query: 284 EKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             +   +P  PE    +A +Y      +     K    +   + +++ + ++++++A + 
Sbjct: 157 NAVIADHPKMPEPLMMLAKVYLD--RGDPAKSSKLLESVLVKDPKNIRARMLLAELAEKQ 214

Query: 339 GSIDQAHAKAMLAMKI 354
             +  A  +    ++ 
Sbjct: 215 KDLKAAEKQYQKLVET 230



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 54/178 (30%), Gaps = 38/178 (21%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA------------ 279
           +     +KG+ I +  +   +L++      A     +  +     + A            
Sbjct: 37  KGKALFEKGEYIKARLEFKNALQIDPKFAEAYYMLGRVEMKTENPKGAFGAFSKAVSLNP 96

Query: 280 ---------EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI---------- 320
                      IL    ++    E A +       +T   L +A  L             
Sbjct: 97  DLLEAQISLGRILFAAKQIEKAKEKAELVLEKKPGDTDALLLKAACLIASEKTKEGEAIL 156

Query: 321 ------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQAN 371
                 + +  E L++++K+ L+ G   ++       +   P      +LLA++ +  
Sbjct: 157 NAVIADHPKMPEPLMMLAKVYLDRGDPAKSSKLLESVLVKDPKNIRARMLLAELAEKQ 214


>gi|161505841|ref|YP_001572953.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867188|gb|ABX23811.1| hypothetical protein SARI_04018 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 1172

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 99/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 282 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 341

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 342 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 401

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 402 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 461

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 462 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 521

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 522 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 581

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +   +V + A  +    +      L  +  P   I L LA 
Sbjct: 582 LAGRLQSNLVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 626


>gi|327287040|ref|XP_003228237.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 3 [Anolis carolinensis]
          Length = 1046

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 71/253 (28%), Gaps = 33/253 (13%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+ +A         + +Y        +    Y         +     A E     L++
Sbjct: 272 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRL 322

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   ++ +L       G++  A R   KAL++ P+       +        +   A+ 
Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  + +  +    A           +  D+  +      ++++      A    A  
Sbjct: 383 HYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 438

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRA------- 314
                   +A        K+   P+  + Y +L           +   ++K+        
Sbjct: 439 HKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 496

Query: 315 ---LRLEEINKES 324
               RL  ++   
Sbjct: 497 LEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|229586824|ref|YP_002845325.1| HemY-like protein [Rickettsia africae ESF-5]
 gi|228021874|gb|ACP53582.1| HemY-like protein [Rickettsia africae ESF-5]
          Length = 334

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 85/260 (32%), Gaps = 11/260 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+   F  +  +   V I+  +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGFTFIERFDSKVFISLYDYNIETTLFFSLILGLLLLISCFIVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116
                +  P+ + ++  KR  +    AL   +++ A     +    A      +S +   
Sbjct: 61  FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFAEYIMNNKAKSASIARKNLSSEDLK 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    L+           +      + ++       +   +L            A+ Y
Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEQAENY 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235
           ATKA + +         +++ Y     W++ I   N+  K +  E     A   +  + +
Sbjct: 175 ATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234

Query: 236 NADKGDMIASYHDAIESLKL 255
             +  +   +      ++ L
Sbjct: 235 EVESNNTANAIDYLATAVDL 254


>gi|42521851|ref|NP_967231.1| hypothetical protein Bd0225 [Bdellovibrio bacteriovorus HD100]
 gi|39574381|emb|CAE77885.1| conserved hypothetical protein with TPR domain [Bdellovibrio
           bacteriovorus HD100]
          Length = 627

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 97/299 (32%), Gaps = 43/299 (14%)

Query: 126 EVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD-- 182
             +    E     A E  +M ++    +    +  L  E  + G +  +   A +A+   
Sbjct: 79  MGEAYALEGNSQKAVEAFKMVLIYDTNSPAVNMR-LAAEFLKQGMITESLAQAEEAVAKD 137

Query: 183 ------------------ISPDAPWVTEAVVQQY--------------VLAKEWSRAITF 210
                             + P A      V++                   K+  +A+ +
Sbjct: 138 PKNVDSHLLLGGLYSSLKLYPKAMEQYNTVMKLQPDNTEAPLYIGALYSEQKQSDKAVKY 197

Query: 211 LNQKKKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                KN +      A   I R  LE  +     A+     ++L+L  +   A +     
Sbjct: 198 FESLLKNPEYNTPYLAHYYIGRVRLEQPEAKYQKAAEASFKKALELKPDFADAVLTLGVL 257

Query: 270 LISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES- 327
              Q  + KA  +     K N P P +A +   +  E          +LE +  +S E  
Sbjct: 258 YSKQKTEDKAVSLYRAFQKENSPSPRVAEVLAQIYIERG-DYENAYEQLEVMENDSDEPL 316

Query: 328 --LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQ 383
              + ++ I +E    D A AK    +K AP   ++   LA + +    +   +  +T+
Sbjct: 317 NVRMKMALILIEQKRYDTAVAKLEEILKDAPESDKVRFYLAAVYEETRQHEKAVKEYTK 375



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 73/197 (37%), Gaps = 17/197 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNS-----AQRYATKALDISP 185
           ++Q + A +  E +L+ P   T   A Y  Y    R+    +     A+    KAL++ P
Sbjct: 188 QKQSDKAVKYFESLLKNPEYNTPYLAHY--YIGRVRLEQPEAKYQKAAEASFKKALELKP 245

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D       +   Y   K   +A++     +K      R   +L    +    ++GD   +
Sbjct: 246 DFADAVLTLGVLYSKQKTEDKAVSLYRAFQKENSPSPRVAEVL----AQIYIERGDYENA 301

Query: 246 YHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           Y   +E ++   +    ++    A  LI Q +   A   LE+I K  P  +    Y   +
Sbjct: 302 YEQ-LEVMENDSD-EPLNVRMKMALILIEQKRYDTAVAKLEEILKDAPESDKVRFYLAAV 359

Query: 304 SENTVGKLKRALRLEEI 320
            E T    K      +I
Sbjct: 360 YEETRQHEKAVKEYTKI 376



 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 84/238 (35%), Gaps = 14/238 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDI 183
            QI +    Y  A+E+LE+M          V      +         ++A     + L  
Sbjct: 289 AQIYIERGDYENAYEQLEVMENDSD-EPLNVR--MKMALILIEQKRYDTAVAKLEEILKD 345

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P++  V   +   Y   ++  +A+    +    +  +    A++  A  L+    G + 
Sbjct: 346 APESDKVRFYLAAVYEETRQHEKAVKEYTKIPSTSTYYG--EAVVHAAYLLKGL--GRLN 401

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
                A   LK   +        A  L  +   + A   LE+  K  P       Y   +
Sbjct: 402 EGLEVAAAGLKARQDQPQIFAMYASLLDEKGDYKNASATLEQGLKKFPENAQLRFYYGTI 461

Query: 304 SENTVGK---LKRALRLEEINKESVESLVIVSKIALEMG-SIDQAHAKAMLAMKIAPR 357
           ++    K   +    ++ E++   V+ L  ++    EMG  + +A   A  A+++ P 
Sbjct: 462 NDRMGNKDVVVTEMQKVLELDPNHVQGLNYLAFTWAEMGVKLPEAEKLARRALELEPT 519


>gi|119505796|ref|ZP_01627863.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
 gi|119458363|gb|EAW39471.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
          Length = 665

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 66/198 (33%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKE 220
            E  + G    A+    +AL+ +P       A++      + +   A   L +  +    
Sbjct: 14  VELVKGGARQEAEALCRQALEQNPGDI-NFVALLGWILAESNKLEEAEELLTRAVRTTPG 72

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             + +  L         +      +      + +L   +         +     + ++A+
Sbjct: 73  NAKAQEDLGT----VLLNLNRPEEALSHLERARELRPPNAPLLSKLGGAYQKLGRLQEAD 128

Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +L++   ++P   ++       ++       K    L   N ++V + +++++IA+   
Sbjct: 129 AVLKQAASMSPVQAKLEEATRLFIAGKFRESEKLTQALVRENPDNVNAALLLARIAIMAK 188

Query: 340 SIDQAHAKAMLAMKIAPR 357
             + A        +  PR
Sbjct: 189 CFEDARVILERITQTKPR 206


>gi|301058586|ref|ZP_07199591.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300447318|gb|EFK11078.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 459

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 49/161 (30%), Gaps = 23/161 (14%)

Query: 89  YTGLMSIAAHNIPLARKM-------HSYVSQQHTFHNEYLVYLLEV-------------- 127
             GL+ + +     A              S         +   L+               
Sbjct: 10  SVGLVFLFSGMADAADNCDVARDVAERAASAYKKNKKRGIDLFLKAYRLCPDDGAFAYNA 69

Query: 128 -QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL-NSAQRYATKALDISP 185
                 +     A + LEM +Q   TR     +L       GD   SA  +A KA  + P
Sbjct: 70  GMACYGDGDLARARKYLEMAVQKDGTRALWHNNLASVLLERGDNMKSALSHAQKAAGLDP 129

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+P + E +   +    ++   I  + +  K   + +R  A
Sbjct: 130 DSPEILETLANAHAAVGDYPGGIAVMKKAAKRWPQNSRVAA 170



 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 14/135 (10%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---- 286
           A    +A K +        +++ +LC +    +  A  +        +A   LE      
Sbjct: 34  AERAASAYKKNKKRGIDLFLKAYRLCPDDGAFAYNAGMACYGDGDLARARKYLEMAVQKD 93

Query: 287 -----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
                W    H  +A++      +N    L  A +   ++ +S E L  ++     +G  
Sbjct: 94  GTRALW----HNNLASVLLE-RGDNMKSALSHAQKAAGLDPDSPEILETLANAHAAVGDY 148

Query: 342 DQAHAKAMLAMKIAP 356
               A    A K  P
Sbjct: 149 PGGIAVMKKAAKRWP 163


>gi|83594427|ref|YP_428179.1| hypothetical protein Rru_A3097 [Rhodospirillum rubrum ATCC 11170]
 gi|83577341|gb|ABC23892.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 933

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 14/229 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
               +A    E  ++   T   AV +L   + + GD   A+      L  +     +   
Sbjct: 491 GDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRTNAGDSAMAMI 550

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    +    +  + +  + A E +          +          A+   A ++L
Sbjct: 551 AAAVANKRND----LVAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAIIVAQDAL 606

Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENTV 308
           ++  +   A + A  K+ +       A  +L +   + P    +  +A  Y +L   N  
Sbjct: 607 RISPD-TPAVMEALGKAQLLIGDYTAAADVLRRAVAIKPSGLTYYLLATAYLNL---NDP 662

Query: 309 GKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +LK A   + ++  + V+S V+++ + ++ GS+  A           P
Sbjct: 663 PRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFP 711



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 94/359 (26%), Gaps = 79/359 (22%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             L     ++  D+ +     G++  +  +  +AR       ++     + +  L     
Sbjct: 463 EALAGDTKRKYPDRAWGWTMDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNL--ALT 520

Query: 130 ALAERQYNIAHEKLEMMLQ----------------IPATREFAVYSLYFESCRIGD---- 169
           AL       A   +E  L+                       AV     ++         
Sbjct: 521 ALQSGDTEGARGVVEGYLRTNAGDSAMAMIAAAVANKRNDLVAVEKWLRQALERDPANME 580

Query: 170 --------------LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                           +A   A  AL ISPD P V EA+ +  +L  +++ A   L +  
Sbjct: 581 AASNLASLLTSTSRPQAAIIVAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAV 640

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                      +     +    +  D           +KL  + + + +  A  ++    
Sbjct: 641 AIKPSG-----LTYYLLATAYLNLNDPPRLKEALESVVKLQPDHVDSRVMLATMIVDGGS 695

Query: 276 KRKAEVILEKIWKVNP-----------------HPEIANIYTHLLSENTVGKLKRALRL- 317
              A+  +E +    P                  P  A  +      +   + +  + L 
Sbjct: 696 LSDAKTAVEGVTTDFPGDPRAQEVRARYLAKAEGPASAITFLEASLTDPNTRPRNLVMLL 755

Query: 318 --------------------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                                  N +     + ++   +    +++A       ++  P
Sbjct: 756 ASAYNEKGDGAKASSLLEDWVAKNPDDYPGRLSLATQQIAANQLEKAKTTLEKGLERVP 814



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 66/230 (28%), Gaps = 12/230 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL          AR              + L+     QI       + A   L      
Sbjct: 142 EGLALFGKGQDGAARLALDKALDIDPADKDALIG--AAQIETMAGHQDAARALLARAAAA 199

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  + +    +    D  +A+   ++A    P  P +  ++ Q  + A + + A  
Sbjct: 200 APDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLIRLSLAQAQIEAGKNAEARQ 259

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            LN    +           L  R L      DM A+  D   +L L      A   A   
Sbjct: 260 TLNTVLADIPA----HPWALYLRGLTAYRTNDMTAADKDLTAALALAKTLRPAIFLAGVV 315

Query: 270 LISQNKKRKAEVIL----EKIWKVNPHPEI--ANIYTHLLSENTVGKLKR 313
             +  +  +A  +L    E   K N   +   A     L  ++   +L R
Sbjct: 316 KYNIGEYEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDESYRLLR 365


>gi|108757682|ref|YP_630165.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108461562|gb|ABF86747.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 490

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 91/252 (36%), Gaps = 11/252 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A   L  ++++    ++A  +L     R+G    A+R   KALD++P+     + 
Sbjct: 89  GELTAAEAALRTLVELDPKLDYAWTNLGIVQERMGKTADAERSYRKALDVAPEQQSAWDC 148

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + + Y      ++    L ++  +  +       L  A ++      +  A+  +A ++L
Sbjct: 149 LARLYGRTGRTAKLEAELRERLSSQPDS----VALRTALAITLLQAKNHAAASAEAKQAL 204

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308
           K  +  + A    A+    + K   A ++LE    ++P     H  +  +Y  L  ++  
Sbjct: 205 KGDERHVRAMQVLAQVYYREGKHELARMVLENARAIDPKDAATHNGLGLVYLAL--DSRP 262

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
             L+      ++  +  E+      +  E      A  +   A++ AP      L     
Sbjct: 263 QALESFKTAAQLRPDFAEARNNFGAMLNEAQDYAAAVTELEAAVRAAPDFASARLNLGNA 322

Query: 369 QANSHNTDKILY 380
                N  +   
Sbjct: 323 HRGQGNFARARA 334


>gi|327287038|ref|XP_003228236.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Anolis carolinensis]
          Length = 1036

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   KRA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+ +A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 71/253 (28%), Gaps = 33/253 (13%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+ +A         + +Y        +    Y         +     A E     L++
Sbjct: 262 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRL 312

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   ++ +L       G++  A R   KAL++ P+       +        +   A+ 
Sbjct: 313 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 372

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  + +  +    A           +  D+  +      ++++      A    A  
Sbjct: 373 HYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 428

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRA------- 314
                   +A        K+   P+  + Y +L           +   ++K+        
Sbjct: 429 HKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 486

Query: 315 ---LRLEEINKES 324
               RL  ++   
Sbjct: 487 LEKNRLPSVHPHH 499


>gi|327287036|ref|XP_003228235.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Anolis carolinensis]
          Length = 1066

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 71/253 (28%), Gaps = 33/253 (13%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+ +A         + +Y        +    Y         +     A E     L++
Sbjct: 272 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRL 322

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   ++ +L       G++  A R   KAL++ P+       +        +   A+ 
Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  + +  +    A           +  D+  +      ++++      A    A  
Sbjct: 383 HYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 438

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRA------- 314
                   +A        K+   P+  + Y +L           +   ++K+        
Sbjct: 439 HKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 496

Query: 315 ---LRLEEINKES 324
               RL  ++   
Sbjct: 497 LEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|297739123|emb|CBI28774.3| unnamed protein product [Vitis vinifera]
          Length = 747

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 102/321 (31%), Gaps = 34/321 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ-----IALAERQYNIAHEKLEMMLQ----- 148
           +    +K  S  + +  + +  L   L  +      A  E + +   E L+ +L+     
Sbjct: 321 DAEECKKRGSIETARAIYAH-ALTVFLTKKSIWLKAAQLE-KSHGTRESLDALLRKAVTY 378

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            P      +     E    GD+ +A+    +A    P++  +  A  +      E  RA 
Sbjct: 379 RPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERAR 437

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDM------------------IASYHDAI 250
             L + ++            ++ R L N  +                       +     
Sbjct: 438 MLLAKARERGGTERVWMKSAIVERELGNTGEERSCIPLWLSLSHLEEKMNGLSKARAVLT 497

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTVG 309
            + K    +    + A ++      K++A++++ K  +  P    +      ++      
Sbjct: 498 MARKKNPQNPELWLAAVRAESRHGNKKEADILMAKALQECPTSGILWAASIEMVP-RPQR 556

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           K K    L++ +      +  V+K+      +D+A      A+ +AP    F  L    +
Sbjct: 557 KTKSLDALKKCD-HDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFE 615

Query: 370 ANSHNTDKILYWTQSALHAMP 390
               + +      +  + A P
Sbjct: 616 VQHGSEENQKDVLRRCVAAEP 636


>gi|51473659|ref|YP_067416.1| hypothetical protein RT0459 [Rickettsia typhi str. Wilmington]
 gi|51459971|gb|AAU03934.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
           Wilmington]
          Length = 334

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 109/322 (33%), Gaps = 28/322 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       ++   F  + H+   V I+  N    T+ F+ + +    L    ++  
Sbjct: 1   MFRLLLISITFLVLYSGFTFIEHFNSKVVISLYNYNIETTLFLSVILELLLLVFCFIIIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                +  PA + ++  KR  +    AL   +++ A     +  KM +    +    ++ 
Sbjct: 61  FLIIIIDLPATIHNIFSKRKINHDRHAL---ILAFA--EYIIGNKMKAASIARKNLSSDD 115

Query: 121 LV------YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           L         +    A      +      + ++       +A  +L          + A+
Sbjct: 116 LKDFQKFYNFILAITA---DDIDSKIFYFQKLITSKEFIFYASKNLAKLYYDKSLYDKAE 172

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARS 233
            YA KA +++         ++  Y     W++ I   N+  K +  E+        +  +
Sbjct: 173 NYAIKAYNLNKLDSDNLIILMHCYAKLSLWTKFIFITNKLAKFHKHEFIPKITQYYLLIA 232

Query: 234 LENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIW 287
            +  +  +   +      AI+     D  +       +   + N K    +   IL+K +
Sbjct: 233 KQEVNSNNTANAIDYLEKAIDLNFYNDELL-------EFYFNLNDKLSVDQKTKILKKAF 285

Query: 288 KVNPHPEIANIYTHLLSENTVG 309
           ++ P   +  ++  + S +   
Sbjct: 286 RITPSLRLVQLFKKITSLSDKQ 307


>gi|239905318|ref|YP_002952057.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239795182|dbj|BAH74171.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 737

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 7/197 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +I D   A+     AL           A+   YV       A+        N  + +  
Sbjct: 508 LKIHDYTVAEALFRHALHSKQSVSRAAAALADLYVTQGRHDEALDVAAAFLPNLYDKDPP 567

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A+LL   S  +  KGD   +   A E+L+L      AS   A   +       A  +L+
Sbjct: 568 KALLLWNASRAHRLKGDTAKAREVAAEALRLQPVFPNASRELALLALGDGALDAAVSLLK 627

Query: 285 KIWKVNP-HPE----IANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +  +  P  PE    +  +Y      +    + +RAL   +    + E+ + ++  AL +
Sbjct: 628 ESHQQTPWEPENWALLGQLYLRQGKYSRAYEQFRRALTRSQELHATTETEIHLALAAL-L 686

Query: 339 GSIDQAHAKAMLAMKIA 355
               +    A+   +  
Sbjct: 687 QRFGRPDIAALHVARAH 703


>gi|206890955|ref|YP_002249256.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 542

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 88/268 (32%), Gaps = 49/268 (18%)

Query: 130 ALAERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCR------------------ 166
            L    Y+ A E  + +L+  +          +  +Y E                     
Sbjct: 124 YLISGMYDKAIETFKKILKEDSENIMALHFLGI--IYIEKKDFKSARESFKTILKLNPDY 181

Query: 167 -------------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                         G+L  A+ Y  KAL+++P+  +  E ++  Y+  K +  AI  L  
Sbjct: 182 EPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERLINLYLSQKSYKEAIKELET 241

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            K+   E  +    L +   L+              +       N +      +   I  
Sbjct: 242 LKEQKSESEQIHEKLALLY-LQIKQYDKATEELEYLLSKHPKDLNLM---YYLSLIYIET 297

Query: 274 NKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            K  +AE +L++I  +NP        +A +Y  L  +  +  L     + +   +  E  
Sbjct: 298 GKLSEAEHLLKQIISINPKQVNAFLNLATVY--LKQKKLIEALNIYDEILQFAGDVPEIY 355

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  ++ A+++    +A      A+   P
Sbjct: 356 IYATETAMDLKDYQRARQYIENALSRFP 383



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 92/269 (34%), Gaps = 9/269 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  +    ++  A   +    +++       + ++     L   +   A   +  +L+  
Sbjct: 19  GYYASINGDLNKAIVFYKEALKEN--PQSKFLKIILADTYLKIDELETAKNYITDVLKED 76

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+  L     +   +  A     K L  SP+   +   +   Y+++  + +AI  
Sbjct: 77  TENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNKIEMLSKIGNLYLISGMYDKAIET 136

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  K     +    + L    +   +K D  ++       LKL  +   A        
Sbjct: 137 FKKILKE----DSENIMALHFLGIIYIEKKDFKSARESFKTILKLNPDYEPAYTNLGAVE 192

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVES 327
                 + AE+  +K  ++NP    A    I  +L  ++    +K    L+E   ES + 
Sbjct: 193 ELAGNLKDAELYFKKALELNPENLFARERLINLYLSQKSYKEAIKELETLKEQKSESEQI 252

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              ++ + L++   D+A  +    +   P
Sbjct: 253 HEKLALLYLQIKQYDKATEELEYLLSKHP 281


>gi|21229674|ref|NP_635591.1| porphyrin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66766551|ref|YP_241313.1| porphyrin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188989613|ref|YP_001901623.1| membrane-anchored conserved protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21111157|gb|AAM39515.1| porphyrin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66571883|gb|AAY47293.1| porphyrin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731373|emb|CAP49548.1| membrane-anchored conserved protein [Xanthomonas campestris pv.
           campestris]
          Length = 421

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 108/361 (29%), Gaps = 31/361 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   YR +    + IL   L    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQAVLILVIALLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K    KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVNASEDEEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE----SCRIGDLNS 172
            L     V++A A      A    + + +   T          L  +    +    D  +
Sbjct: 120 ALAS--AVRVADARGDVASATALAQQLAERDPTAHALLQGERHLAQQRPVDAINALDSAA 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +   A                   A   L   ++ A       + L    
Sbjct: 178 AQPLPARGLLLRTHA----------LAQIGRADEAYGQLGALRQQAVLAPEAYSALEATL 227

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291
           + +   +     +  +  E+L     +  A + A A+     +    A   LE+      
Sbjct: 228 AEQTLLQAGDANALAERWEALPKALRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQW 287

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +Y  L  E    +   A R    + +S   L+ +++++       QA      A
Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQHPDSPGLLLTLARLSRHQQQWSQAEEFLHRA 347

Query: 352 M 352
           +
Sbjct: 348 L 348


>gi|15892637|ref|NP_360351.1| hypothetical protein RC0714 [Rickettsia conorii str. Malish 7]
 gi|15619806|gb|AAL03252.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 334

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 86/260 (33%), Gaps = 11/260 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+   F  +  +   V I+  +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGFTFIERFDSKVFISLYDYSIETTLFFSLILSLLLLISCFIVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116
                +  P+ + ++  KR  +    AL   +++ A     +    A  +   +S +   
Sbjct: 61  FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFAEYIMNNKAKSASIVRKNLSSEDLK 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    L+           +      + ++       +   +L            A+ Y
Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEQAENY 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235
           ATKA + +         +++ Y     W++ I   N+  K +  E     A   +  + +
Sbjct: 175 ATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234

Query: 236 NADKGDMIASYHDAIESLKL 255
             +  +   +      ++ L
Sbjct: 235 EVESNNTANAIDYLATAVDL 254


>gi|285808330|gb|ADC35860.1| TPR repeat-containing protein [uncultured bacterium 92]
          Length = 755

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 98/302 (32%), Gaps = 21/302 (6%)

Query: 95  IAAHNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA- 151
           +    +  AR++   ++ +  F      L  L   Q       +  AH+ L+ +L+    
Sbjct: 279 VFVGRLDDARRVLEPLTAKDAFVASRTRLAALTYAQ------DHAAAHKLLDAVLKRDPK 332

Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R   +   +        L+ A      A+   P        +       +    A+  
Sbjct: 333 YARALLLRGQFL--LEEHKLDEALTQVKAAIAADPSMAEAQYFLGMVQDARQRPDEAMAA 390

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  +        +  L    S  N D+G    +   A  +     N  +  +  A+SL
Sbjct: 391 FTEVLRLNPRATAAQVQL----SRLNLDRGRRDTALQYAESAASAYPNDPVTQLALARSL 446

Query: 271 ISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKR---ALRLEEINKESVE 326
           I+     +A  +L  +    P  P I  +   + +        R   A  L  ++ +++E
Sbjct: 447 IANGNVDRAGQVLTNLQAAQPRLPAIRVLLGKVAAARRDEAAARRHFADALV-LDPDNLE 505

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +L  +  + L       A  +    +  +P+    LLLA    A + +        Q A+
Sbjct: 506 ALSSLVGLDLVAHQPQAARTRVDDRVSKSPKDSNVLLLAGRVHAVTGDVPGAEQLLQRAI 565

Query: 387 HA 388
            A
Sbjct: 566 EA 567



 Score = 43.4 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 87/278 (31%), Gaps = 16/278 (5%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY +L  G++ +       A                  + L   Q  LA  Q + A   L
Sbjct: 167 GYASL--GIVRLEQGQQNEAEGAFRKAVAADPKSATARIAL--AQFLLATNQQSEAETSL 222

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-QQYVLAK 202
              L+I      A  +L            A+ +     D  P     ++  +   YV   
Sbjct: 223 NEALRIEPGNVLAHRALAALLMTTKRTADAEAHLKAVADSDPTPAATSKLTLSDYYVFVG 282

Query: 203 EWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
               A   L     K+A   +R R   L           D  A++      LK       
Sbjct: 283 RLDDARRVLEPLTAKDAFVASRTRLAALTYAQ-------DHAAAHKLLDAVLKRDPKYAR 335

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLE 318
           A +   + L+ ++K  +A   ++     +P    A  +  ++ +        +     + 
Sbjct: 336 ALLLRGQFLLEEHKLDEALTQVKAAIAADPSMAEAQYFLGMVQDARQRPDEAMAAFTEVL 395

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +N  +  + V +S++ L+ G  D A   A  A    P
Sbjct: 396 RLNPRATAAQVQLSRLNLDRGRRDTALQYAESAASAYP 433



 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 42/319 (13%), Positives = 89/319 (27%), Gaps = 39/319 (12%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
           KR+       L  G   +  H +  A               E   +L  VQ A    + +
Sbjct: 328 KRDPKYARALLLRGQFLLEEHKLDEALTQVKAAIAADPSMAEAQYFLGMVQDARQ--RPD 385

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A      +L++      A   L   +   G  ++A +YA  A    P+ P    A+ + 
Sbjct: 386 EAMAAFTEVLRLNPRATAAQVQLSRLNLDRGRRDTALQYAESAASAYPNDPVTQLALARS 445

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------------LIARSLEN------ 236
            +      RA   L   +         R +L                 A +L        
Sbjct: 446 LIANGNVDRAGQVLTNLQAAQPRLPAIRVLLGKVAAARRDEAAARRHFADALVLDPDNLE 505

Query: 237 ---------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                           A+     + +          + A +          AE +L++  
Sbjct: 506 ALSSLVGLDLVAHQPQAARTRVDDRVSKSPKDSNVLLLAGRVHAVTGDVPGAEQLLQRAI 565

Query: 288 KV-----NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +        +  +  ++  +         +R  ++     +SV +  +V+ +     +  
Sbjct: 566 EADSNNLQAYAALGQLF--ISEHKMPEARERFEQIIAKRPDSVPAQTMVAMLYEAEQNRS 623

Query: 343 QAHAKAMLAMKIAPRKEIF 361
           +A  +    M+I     + 
Sbjct: 624 EARKRYERVMQIDQDAAVA 642


>gi|308274171|emb|CBX30770.1| hypothetical protein N47_E42820 [uncultured Desulfobacterium sp.]
          Length = 765

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 9/254 (3%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            Y+        E  V L   ++ LA  +   A    +  +        A+  L       
Sbjct: 263 QYLKCLEISPKEVPVRLRLAELYLAWGKKEKAEAAFKETVDKNPQDIKALSRLASFYIDD 322

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
              +   +   K L I+P +        + Y++  +++ A +      K+  +     A+
Sbjct: 323 KKYDEGMKETEKILKINPKSQEGLVLKGRLYLVRNKFTEAQSLFQSFLKDNPKA----AL 378

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN----KKRKAEVIL 283
                ++ +    +   +     E++KL           A   + +        +A  +L
Sbjct: 379 GYYLLAMAHYGNKETQQAKTALAEAIKLNTKWSEPRFLLANIYMREGAYSEAVNEAMGVL 438

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           ++    NP   +    ++L+ +N     K    L +I   +  +   + ++ L      +
Sbjct: 439 KEQ-PKNPKAYLIMGNSYLMQKNIPEAQKSFEELLKIAPNNPFAYSQMGRLMLVEKKEKE 497

Query: 344 AHAKAMLAMKIAPR 357
           A      A+K+ P 
Sbjct: 498 ALENFEKALKLQPD 511



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 110/305 (36%), Gaps = 20/305 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G + + + N   A++    V  +   +   L +LL   I ++E+  + A  + E      
Sbjct: 113 GTLYLLSGNPDKAKEQVDIVLSKDAKN--SLAHLLLSGIYVSEKNLDNAVTEAEK-ATEG 169

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-IT 209
             +  A   L        D+  A+     A++ +  +     ++ Q Y+   +   A   
Sbjct: 170 EMKLEAYLHLANLYIMKKDIAKAEEMLIAAVNSNEKSMVARFSLAQFYLRTGKIDNAERE 229

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAA 267
           FLN  K + K+            +L N          +    ++ L++    +   +  A
Sbjct: 230 FLNAVKADPKDVK-------AYMALGNFYFITKRPEDAEKQYLKCLEISPKEVPVRLRLA 282

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322
           +  ++  KK KAE   ++    NP        +A+ Y      +    +K   ++ +IN 
Sbjct: 283 ELYLAWGKKEKAEAAFKETVDKNPQDIKALSRLASFYIDDKKYD--EGMKETEKILKINP 340

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
           +S E LV+  ++ L      +A +     +K  P+  +   L  +    +  T +     
Sbjct: 341 KSQEGLVLKGRLYLVRNKFTEAQSLFQSFLKDNPKAALGYYLLAMAHYGNKETQQAKTAL 400

Query: 383 QSALH 387
             A+ 
Sbjct: 401 AEAIK 405



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 25/321 (7%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY  L   +          A+   +   + +T  +E     L   I + E  Y+ A    
Sbjct: 379 GYYLLA--MAHYGNKETQQAKTALAEAIKLNTKWSEP--RFLLANIYMREGAYSEAVN-- 432

Query: 144 EMML------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           E M       + P        S   +     ++  AQ+   + L I+P+ P+    + + 
Sbjct: 433 EAMGVLKEQPKNPKAYLIMGNSYLMQK----NIPEAQKSFEELLKIAPNNPFAYSQMGRL 488

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            ++ K+   A+    +  K   ++      ++        +  D   ++    E +K+  
Sbjct: 489 MLVEKKEKEALENFEKALKLQPDYTEPLQFIVSVM----MNNKDYKKAFERVDEQIKISP 544

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRA 314
            +       A     +     AE   +K  ++N   P  ++A    +L  +      K  
Sbjct: 545 KNPFLYNIRASLYEFEKDLTNAENDFKKAIELNRDSPALQMALGNFYLRHKTMDKAKKSY 604

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSH 373
               +   +S+ + + +  I       D+A +     +KI P        LA I      
Sbjct: 605 EETIKKAPDSLNAQMALGMIYENEKKYDEAKSHYEKVLKINPDFAPAANNLAYIYAEKGG 664

Query: 374 NTDKILYWTQSALH-AMPDPL 393
           N D+ L   Q A      DP 
Sbjct: 665 NIDEALNLAQKAKELVPEDPH 685


>gi|297304121|ref|XP_002806323.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit [Macaca
           mulatta]
          Length = 963

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|70730204|ref|YP_259943.1| TPR domain-containing protein [Pseudomonas fluorescens Pf-5]
 gi|68344503|gb|AAY92109.1| TPR domain protein [Pseudomonas fluorescens Pf-5]
          Length = 785

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 73/190 (38%), Gaps = 11/190 (5%)

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           KA+ I+     +  A          W +A+      + +     R  A L +A   + + 
Sbjct: 569 KAVRITAARDLLGAARSGLGPAQGAWDKALGEYEAVQLS--LVERAEANLNLAMLYQASG 626

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +G  +  Y  A  +L+   +   A +   + L +  + ++A+ +L +   +  HPE A +
Sbjct: 627 RGAEVEPYLRA--ALRRDSDFFPALVTLGQWLEANGRSQEAQQLLAQ--ALQQHPESALL 682

Query: 299 -----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                 + +   +T   +    +  E+  ++ +   +++    + G  D A+ +    ++
Sbjct: 683 QHTRGLSLIRGGDTARAMAALKKAAELEPQNPQYAYVLAVALHDSGQQDAANRQLQALLQ 742

Query: 354 IAPRKEIFLL 363
             P +    L
Sbjct: 743 RQPTQRNARL 752


>gi|323498286|ref|ZP_08103288.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326]
 gi|323316714|gb|EGA69723.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326]
          Length = 389

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 101/338 (29%), Gaps = 57/338 (16%)

Query: 98  HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +       + +      +  +     + A +  E +++ P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMVSGFLDRAEKIFEQLVEEPDHREA 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI--TFLNQ 213
           A+                                  + +V  Y   +EWS+AI    L  
Sbjct: 143 AL----------------------------------QQLVSIYQQTREWSKAIHYATLLV 168

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           K    +  N   A      +++    G+   +  +  ++L      + ASI   KS +  
Sbjct: 169 KLGRKRMRNSI-AHFWCELAMQEKADGNDAKAAQNFKKALSEDPKCVRASIALGKSYLEN 227

Query: 274 NKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
                A   +E +      +     P +A  Y HL  E+ + +  R   +      S E 
Sbjct: 228 EDYSNAIKYMEMVLEQDSDFVSEVLPTLAECYHHLGQEDALLEFLR-QCIVSKAGASAE- 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQSA 385
            ++++++  +      A       +   P  + F  L    + +A        L   Q  
Sbjct: 286 -LMLAQLVAQHEGSGAAQELLTRQLVKNPTMKGFYRLIDYHLMEAEEGRAKASLGTLQKL 344

Query: 386 LHAMP--DPLWISDDGYLSSV---WLPLSPISKTLCYF 418
           +       P +       S+    W    P  K     
Sbjct: 345 VGEQLKVKPHYRCRKCGFSTHSMYWH--CPSCKGWGTI 380


>gi|261819439|ref|YP_003257545.1| cellulose synthase subunit BcsC [Pectobacterium wasabiae WPP163]
 gi|261603452|gb|ACX85938.1| cellulose synthase operon C domain protein [Pectobacterium wasabiae
           WPP163]
          Length = 1159

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 116/316 (36%), Gaps = 42/316 (13%)

Query: 91  GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI------- 138
           GL+ + A +   A     + + + V++ ++   E L+   +    +AE    +       
Sbjct: 314 GLIYLRAGDRVTALAQFQKALQADVNRLNSGKWEGLIQSTQYWATIAEGDNALKANNLPL 373

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   Q+  T  +A+  L   +    +  +AQ++  +AL + P        +V  Y
Sbjct: 374 AQQKYQQARQMDNTNAYALIGLGDVAVASKNDATAQQFYQQALHLEPGNDNALRGLVGIY 433

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAI-----LLIARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN   ++ +   R         +L  ++ + +++     +     ++ 
Sbjct: 434 QRQSP-EKALAYLNSLSRSQQNTMRETLTALQLDILKQQADQLSEQQQWAQAEEKYRQAN 492

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENT 307
           +   N +  +   A++L    + ++A+  +++     P P  A       +Y    + + 
Sbjct: 493 QQDPNDVWLAYHYAQTLRQLGQTQQADNTVQRA-TAVP-PASAEKNYVYSLYLSSTNRDE 550

Query: 308 VGKLKRALRL--EEINKE--------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              L     L   + + +        ++++ +  ++   + G    A A           
Sbjct: 551 QA-LAHLNALPTAQWSADMRDLSQRLTIQTTLAKAEAMRDAGDEPAAIAFLRQQPVDT-- 607

Query: 358 KEIFLLLAQ--IEQAN 371
             I LLLA   + +  
Sbjct: 608 -RIDLLLADWALARGE 622



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 35/134 (26%), Gaps = 6/134 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L + +          A   L                L   +   G+  +A     +  
Sbjct: 579 TTLAKAEAMRDAGDEPAAIAFLRQQPVDTRIDLL----LADWALARGEYTTALTEYQRIR 634

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240
              P  P      +  ++       A   LNQ   + A   N  R +    +++ N  K 
Sbjct: 635 TREPQNPDAQLGEIDAFIAQGRQDDARQRLNQLPTQAADTLNGKRRVANAWQAVGNPQKS 694

Query: 241 DMIASYHDAIESLK 254
                    I++ K
Sbjct: 695 -TALFRQLKIDAQK 707


>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
 gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
          Length = 353

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 83/230 (36%), Gaps = 7/230 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A  E +Y  A      ++ I +    A + +     + G L  A     KA+++ P+  +
Sbjct: 36  AQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYSF 95

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +        +   AI       K A E + N A       L   D+G +  +    
Sbjct: 96  AYNNMGNALRKQGKLEEAI----AAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAY 151

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA--NIYTHLLSENT 307
            ++++L  N   A      +L  Q K  +A    +K  +++P+   A  N+   L  +  
Sbjct: 152 KKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGK 211

Query: 308 VG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +    +  EIN     +   +     + G  D+A A    A++I P
Sbjct: 212 YDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINP 261



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 71/226 (31%), Gaps = 15/226 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   + +Y        N+   Y         + +   A    +  +++      A Y+
Sbjct: 108 GKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYN 167

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +     R G L  A     KA+++ P+  +    +        ++  AI    +  +   
Sbjct: 168 MGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAIEINP 227

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A       +    +G    +     +++++  N          +L  Q K  +A
Sbjct: 228 NY----AFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYNNMGLALDDQGKYDEA 283

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
               +K  +++P+  +A              LK A RL  IN    
Sbjct: 284 IAAHKKALEIDPNLVLAQ-----------NNLKEAERLLAINNNPP 318


>gi|253686481|ref|YP_003015671.1| cellulose synthase operon C domain protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251753059|gb|ACT11135.1| cellulose synthase operon C domain protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 1164

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 115/314 (36%), Gaps = 38/314 (12%)

Query: 91  GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYL-------VYLLEVQIALAERQYNI 138
           GL+ + A +   A     + + + V++ ++   E L         + E   AL     ++
Sbjct: 314 GLVYLRAGDRAKALTQFQKALQADVNRLNSGKWEGLIQSTQYWTTIAEGDNALKANNLSL 373

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   Q+  T  +A+  L   +    +  +AQ    +AL + P        +V  Y
Sbjct: 374 ARQKYQQARQMDNTNAYALIGLGDVAVASKNDAAAQPLYQQALHLEPGNDNALRGLVGIY 433

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAI-----LLIARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN   ++ +   R         +L  ++ + +++     +     ++ 
Sbjct: 434 QRQSP-EKALAYLNSLPRSQQNTMRETLAALQLNILKQQADQLSEQQQWTQAEEKYRQAS 492

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVG 309
           +   N I  +   A++L    + ++A+ ++++   V P       + ++Y    + +   
Sbjct: 493 QQDPNDIWLAYHYAQTLRQLGQTQQADSVVQRATAVPPTSAEKNYVYSLYLSSTNRDEQA 552

Query: 310 KLKRALRL--EEINKESVE--------SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            L     L   + + +  E        + +  ++   + G    A A      +      
Sbjct: 553 -LAHLNTLPTAQWSDDMRELSQRLTIQTTLAKAEAMRDAGDEPAAIAFLR---QQPADTR 608

Query: 360 IFLLLAQ--IEQAN 371
           I LLLA   + +  
Sbjct: 609 IDLLLADWALARGE 622



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 37/156 (23%), Gaps = 6/156 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L + +          A   L                L   +   G+  +A     +  
Sbjct: 579 TTLAKAEAMRDAGDEPAAIAFLRQQPADTRIDLL----LADWALARGEYATALAEYQRIR 634

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240
              P  P      +  ++       A   LNQ   +     N  R +    +++ N  K 
Sbjct: 635 TREPQNPDAQLGEIDAFIAQGRQDDARQRLNQLPTQAVDTLNSQRRVANAWQAVGNPQKS 694

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             +      I++ K            A       + 
Sbjct: 695 AALF-RQLKIDAQKEPVGQTPIDQTTALIYRDAARV 729


>gi|261342010|ref|ZP_05969868.1| putative cellulose synthase operon C protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315927|gb|EFC54865.1| putative cellulose synthase operon C protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 1160

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL  Q   AL       A    +    I  T  +AV  L   +    D  +A+RY  +AL
Sbjct: 354 LLIQQGDAALKANDTAQAERFYQQARNIDNTDSYAVLGLGDAATARNDNAAAERYYRQAL 413

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQKKKNAKEWNRNRAIL---LIARSLEN 236
            +          + + Y        A  I  L+  ++ + + +  R +    L A++ + 
Sbjct: 414 RMDSGNSNAVRGLARLYRAQSPEKAAEFIQSLSASQRRSID-DIERGLTNDRLSAQAEQL 472

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
            ++G    +       L L    +  +   ++ L S  +  +A+ ++ ++    P  PE 
Sbjct: 473 ENEGKFAQAADIQRRRLALSPGDVWITYRLSRDLYSAGQHGQADNLMRQLASQKPGDPEQ 532

Query: 296 ANIYTHLLSENTVGKLKRAL 315
              Y   LS N   +   A 
Sbjct: 533 VYAYGLYLSGNNQDRAALAH 552



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 46/158 (29%), Gaps = 8/158 (5%)

Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R        +     +     + L     A        A      +LQ     E A+  L
Sbjct: 585 RDSGKEQEAETLLRQQPTSTRIDLTLADWAQQRGDNATAKTAYGTVLQREPQNEDALLGL 644

Query: 161 YFESCRIGDLNSAQRYATK--ALDI-SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KK 215
                  GD  +A+    K  A +   P +  V   V        + + A    ++   +
Sbjct: 645 TEVYIAEGDRQAARAELAKLPATENGQPRSLNVQRRVAMAQAGLGDTAAADQTFSKLIPQ 704

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             ++  +   A++L   +   A  G    +     +++
Sbjct: 705 ATSQPPSMENALVLRDAARFQAQNGQPQQALETYKDAM 742



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 76/206 (36%), Gaps = 20/206 (9%)

Query: 90  TGLMSIAA-HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
              +S+ +  +   A +     +QQ    +       E   A+   Q + A  +L+  + 
Sbjct: 240 QKYLSVFSDGDSVTAAR-SQLEAQQKQLADPTFRAKAEGLAAVDAGQGSKAVAELQKAVS 298

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP----WVTEAVVQ-----QYV 199
              T   A+ +L     + GD   A     KA+ + P +     W  +++++       +
Sbjct: 299 ANHTDSEAIGALGQAYSQKGDRARAVAQFEKAIALDPQSDNRGKW--DSLLKVNRYWLLI 356

Query: 200 LAKEWS-RAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              + + +A          ++    +   + A+L +  +     + D  A+     ++L+
Sbjct: 357 QQGDAALKANDTAQAERFYQQARNIDNTDSYAVLGLGDAAT--ARNDNAAAERYYRQALR 414

Query: 255 LCDNSIMASICAAKSLISQNKKRKAE 280
           +   +  A    A+   +Q+ ++ AE
Sbjct: 415 MDSGNSNAVRGLARLYRAQSPEKAAE 440


>gi|220933218|ref|YP_002512117.1| HemY-like protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994528|gb|ACL71130.1| HemY-like protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 390

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 119/358 (33%), Gaps = 10/358 (2%)

Query: 25  PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84
           P    + +GN    TS  V L  L    F   LL  +       P  +  +  +   +  
Sbjct: 26  PGYALLAYGNLSVETSLAVFLVALVLLFFGLYLLLRLLTRLWGLPGGVRDLRRRHQAEAA 85

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKL 143
            + L  GL+ +A      A K+    +++       L++ L   + A     Y      L
Sbjct: 86  RRGLNQGLIEMAEGRWERAEKLLVRSARR---SQTPLIHWLSAARAAQMLGAYTRRDHYL 142

Query: 144 EMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
               +  +  + AV     ++      G    A        ++ P   ++ +   + +  
Sbjct: 143 AEASRCESGSDVAVE--LTQAELQIAHGQHEQALATLNHLNELVPRHRYLLKLRARLHER 200

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             + +     L + ++       + A +    + E   K     +     E L       
Sbjct: 201 LNDCAALFELLPELRRAKVLPETDLADMENRATRELLAKAADADAVRRLWERLPRDARHR 260

Query: 261 MASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
              + A A++LI   +  +AE +L    K      + ++Y  L  E+    L+ A    +
Sbjct: 261 PRLVEAHARALIRLKEINQAEHLLRSALKSGWDEGLVHLYGTLPVEDPARALETAEGWSK 320

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +      L+ + ++A       +A A    +  + PR E +  LA++ +    N   
Sbjct: 321 QHGRDAALLLTLGRLARRAKLWGKARAYLEASTGLRPRPETYRELAELLEEMGENERA 378


>gi|282899497|ref|ZP_06307462.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281195604|gb|EFA70536.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 280

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 12/162 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
                     A       LQ     P T  +        S   GD   A     +A+ +S
Sbjct: 102 AYFDLNNKERAINDYNQSLQINPNDPET--YNYRGNARASL--GDQKGAIEDYNEAIRLS 157

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P+           +      + A+    Q  +  + +    ++    R    +  G+   
Sbjct: 158 PNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNY----SVAYNNRGNAYSSLGNTSK 213

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  D  ++++L      A      +  S   KR+A   L+K 
Sbjct: 214 AIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDLQKA 255



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 10/177 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L+ Q   +   +  A         L       F    L +    + +   A     ++L 
Sbjct: 64  LQGQNQHSRGNFQAAIAAYSKSISLNSDYAPAFKARGLAY--FDLNNKERAINDYNQSLQ 121

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           I+P+ P              +   AI   N+  + +  +    A     R   +A +G+ 
Sbjct: 122 INPNDPETYNYRGNARASLGDQKGAIEDYNEAIRLSPNY----AEAFNNRGNSHAAQGNK 177

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            A+  D  +++++  N  +A      +  S     KA     +  ++N  P+ A  Y
Sbjct: 178 NAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSKAIADYNQAIRLN--PQFAPAY 232


>gi|302342733|ref|YP_003807262.1| hypothetical protein Deba_1300 [Desulfarculus baarsii DSM 2075]
 gi|301639346|gb|ADK84668.1| TPR repeat-containing protein [Desulfarculus baarsii DSM 2075]
          Length = 405

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 89/266 (33%), Gaps = 18/266 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNR 223
            + G  N A     + L   P        +V  Y   ++W+ A   + +  K   ++   
Sbjct: 141 RKGGLFNRAVEAFQEVLSRDPGHQDALRQLVGLYEEMRDWASAYETMRRLSKLTGEDNRL 200

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A        +    G + A+     +++ +    + A +      +++ + RKA  + 
Sbjct: 201 VLAHHKTELGKDLQAAGKLDAAEQAMSQAISVHKKCLDAYLHLGDLELARGRNRKAINLW 260

Query: 284 EKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVE--SLVIVSKIA 335
            K  ++ P      +Y HL      ++E T+G+   A  L  ++ +  E  +L+ ++K  
Sbjct: 261 RKAVQMAP------VYAHLVISRLDMAEETLGRKVVADFLAGVDLDQAEPATLLALAKSR 314

Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQ-SALHAMPDPL 393
              G   QA      A+   P   E   L   I  A   N   +  + +  A        
Sbjct: 315 QRHGEHKQALQLLEAAIVKEPGCLEAHQLRGDILLAAGDNDACLKAYVELLAQVQGYGAQ 374

Query: 394 WISD-DGYLSSVWLPLSPISKTLCYF 418
           +     G++S       P        
Sbjct: 375 YQCGQCGFVSHQLAWKCPRCHGWDTM 400


>gi|33593517|ref|NP_881161.1| hypothetical protein BP2534 [Bordetella pertussis Tohama I]
 gi|33572873|emb|CAE42809.1| putative exported protein [Bordetella pertussis Tohama I]
 gi|332382925|gb|AEE67772.1| hypothetical protein BPTD_2494 [Bordetella pertussis CS]
          Length = 531

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/378 (11%), Positives = 104/378 (27%), Gaps = 18/378 (4%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           +  +V +         S  + + +L        +   +  + ++ P  L     +R  ++
Sbjct: 24  HAGNVLLLVWPWRIELSLTLTVLLLVAAFVTLYVGLRLLAWLVAIPDRLRAWRGRRAQER 83

Query: 84  GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
            ++ L  G + +       A K +     Q     +  L  L   + A    +Y    ++
Sbjct: 84  DHELLERGWIGLLEGRFAQAEKDLSKLFDQTKVRSSRVLAALSGARAAHNLGEYER-RDR 142

Query: 143 LEMMLQIPATREFAVYSLYFES---------CRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +    +  A  +  +     E+            G    A        D           
Sbjct: 143 MLESAREQAGEDAGL----QEATATVSADMLLDQGRAQQALDLLEPLQDGGARHLHTMRL 198

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++     +   R         +           L+ +        G  +  +    + L
Sbjct: 199 LLRAETALQHHERVFMLARGLLRRNAIGKAEAEQLIDSAGAARLRAGMAVDQWRPIWKDL 258

Query: 254 KLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           K  +  +   ++  A +     +  +A  ILE    V  +P +   Y    +     +L 
Sbjct: 259 KSDERLLPNIALAGAAAFEDAGEANEAARILEAAVAVKFNPALVAAYARCDAAQVPHRLA 318

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           +A    +      + L  +  + L      QA      ++      +   LL  +     
Sbjct: 319 KAETWLQQRPADTDLLTALGLLCLNGQLWRQAERYLQRSVSRRNDPQAHALLGSLYDRLD 378

Query: 373 HNTDKILYWTQSALHAMP 390
              D   +W      A  
Sbjct: 379 RPADAARHW--RQATAAR 394


>gi|218246665|ref|YP_002372036.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|257059707|ref|YP_003137595.1| hypothetical protein Cyan8802_1863 [Cyanothece sp. PCC 8802]
 gi|218167143|gb|ACK65880.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|256589873|gb|ACV00760.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 344

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 88/241 (36%), Gaps = 16/241 (6%)

Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L         E +Y+ A    + +L+  P T++  +  +     +  D   A  +   A 
Sbjct: 20  LARMALQLVQENRYDEALLAFQEILEQDPNTKQAHL-GIGRIYLKQKDYQGALTHFQTAR 78

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           ++ P     + A+   Y   K+    +    Q  ++A   + + A   +        +  
Sbjct: 79  NLDPMMVQASLAIGNAYYELKQ----LELSMQAFQDAVNIDPSDATGYLGIGRVLIKQKQ 134

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299
              +     ++L L    I+A +  A+    Q    +A   +E + K+NP   ++N Y  
Sbjct: 135 YPQAKEQLQKALVLNPQLILARLLMAQIYQEQGDIDQAITEIESVLKLNPT--LSNAYQG 192

Query: 300 ---THLLSENTVGKLKRALRLEEINKESV-ESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               +L  E      K   + +++N +    + +   ++ ++  ++D+A A         
Sbjct: 193 LGNLYLKQEKYALARKNFEQAQQLNPKIPAAAKLPYLEVLVQDNALDEATAILKEMPNQK 252

Query: 356 P 356
           P
Sbjct: 253 P 253



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 46/151 (30%), Gaps = 1/151 (0%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           +                L  LL  QI   +   + A  ++E +L++  T   A   L   
Sbjct: 137 QAKEQLQKALVLNPQLILARLLMAQIYQEQGDIDQAITEIESVLKLNPTLSNAYQGLGNL 196

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEA-VVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
             +      A++   +A  ++P  P   +   ++  V       A   L +         
Sbjct: 197 YLKQEKYALARKNFEQAQQLNPKIPAAAKLPYLEVLVQDNALDEATAILKEMPNQKPLEV 256

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESL 253
           R + +       +   +  + +    A+ + 
Sbjct: 257 RKQKLWGDIYVRQGFLEEALQSYRSAALLAA 287


>gi|74007680|ref|XP_858842.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase
           isoform 9 [Canis familiaris]
          Length = 933

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|332019094|gb|EGI59622.1| Pre-mRNA-processing factor 6 [Acromyrmex echinatior]
          Length = 931

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 34/200 (17%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224
            GD+ +A+   + A   +P++  +  A V+      E+ RA   L + + +A        
Sbjct: 610 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMK 669

Query: 225 ------------RAILLIARSLENADK---------------GDMIASYHDAIESLKLCD 257
                        A+ L+  +LE  D                G +  +     +++K C 
Sbjct: 670 SAKLEWALNNLDAALHLLKEALEAFDDFPKLWLMKGQIEEQQGYLDKAIDTYNQAIKKCP 729

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR--AL 315
           NSI      A+    +N+  KA  +LEK    N  P+ A ++   +         R  A 
Sbjct: 730 NSIPLWCLLARLEHRKNQVTKARSVLEKARLKN--PKNAELWLEAIRNELKKGGARDMAN 787

Query: 316 RLEEIN-KESVESLVIVSKI 334
            L     +E   S ++ ++ 
Sbjct: 788 TLMAKALQECPTSGLLWAEA 807



 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +          
Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 335

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     +S++    S+   I AA        KR    +  K 
Sbjct: 336 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETEVKAKR---RVYRKA 385

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SV+  + ++++     + D A
Sbjct: 386 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468


>gi|83814061|ref|YP_446792.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
          Length = 554

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 8/224 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G       ++  A  + SY         +   Y         +     A    E  L +
Sbjct: 332 RGNAEANQGDLEAA--VESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDL 389

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            +    A Y L            A      A+++  + P    A         +   A+ 
Sbjct: 390 KSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALE 449

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                 ++A   + +        +    +K     +     ++L+L   S       AK+
Sbjct: 450 ----SYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKA 505

Query: 270 LISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKL 311
           L++  +  ++   L+  ++++P    E    Y  L   + V +L
Sbjct: 506 LLALGRADESIRALKTAFRLDPAKKEEFQKAYPTLYDNDRVRRL 549


>gi|315634978|ref|ZP_07890259.1| HemY protein [Aggregatibacter segnis ATCC 33393]
 gi|315476240|gb|EFU66991.1| HemY protein [Aggregatibacter segnis ATCC 33393]
          Length = 424

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 13/226 (5%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
            ++     V I   + +   S   ++      L     +  V   F       +    +R
Sbjct: 20  YLAGKQGYVRIETASHIVEMSITTLVIFFVLALALVYSIEVVISRFFRLSNNTYSWFSRR 79

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
              K  K    GLM +   +   A K+    ++        L ++   + A        A
Sbjct: 80  KRTKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SDEPVLNFIKAAEAAQQRGDEFSA 137

Query: 140 HEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +    +M    AT      SL  E        +   L +A+      L ++     V + 
Sbjct: 138 NRY--LM---EATEIAGSDSLVLEIARIRILLQQNKLPAARSSVDSLLLMAGKNKEVLKL 192

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            V+ Y+ +K +      L+Q +K+    ++    L         D+
Sbjct: 193 AVEIYLKSKAYQALDNILDQIEKSGLYASQEFVALQTQVEDGLLDE 238


>gi|307252643|ref|ZP_07534536.1| hypothetical protein appser6_11570 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859888|gb|EFM91908.1| hypothetical protein appser6_11570 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 409

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ +I     +S     V I    ++   S  +++      +     +  +   F  
Sbjct: 2   LLLLASLIFG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  +   A K+ S  ++     +E ++ L++ 
Sbjct: 61  LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
            + A        A++                  L   +   G  N A   A   + +   
Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160

Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             P A    +++++        +  +       K++K +N    IL
Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203


>gi|156554377|ref|XP_001604212.1| PREDICTED: similar to pre-mrna splicing factor [Nasonia
           vitripennis]
          Length = 932

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 37/255 (14%)

Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           +     E LE +LQ      P +    +        + GD+ +A+   + A   +P++  
Sbjct: 574 KTYGTRESLETLLQRAVAHCPKSEVLWLMG-AKSKWQAGDVPAARGILSLAFQANPNSED 632

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLE 235
           +  A V+      E+ RA   L + + +A                     A+ L+  +++
Sbjct: 633 IWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAALQLLKEAID 692

Query: 236 NAD---------------KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             +               KG    +     + +K C  SI      A   + +N+  KA 
Sbjct: 693 TFENFPKLWLMKGQIEEQKGQQEKALETYNQGIKKCPTSIPLWRLLAHLEMKRNQFTKAR 752

Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +LEK    NP +PE+         ++   +      + +  +E   S ++ ++ A+ M 
Sbjct: 753 SVLEKARLRNPKNPELWLEAIRNEMKSGGNRDMANTLMAKALQECPNSGLLWAE-AIFME 811

Query: 340 SIDQAHAKAMLAMKI 354
           +  Q   K++ A+K 
Sbjct: 812 ARPQRRTKSIDALKK 826



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +          
Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVVGKVQMARNLIMKGCEVNPSSEDLW- 335

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++++    S+   I AA        KRK   +  K 
Sbjct: 336 -------LEAARLQPPDTAKAVIAQAVRHISTSVRIWIKAADLETESTAKRK---VYRKA 385

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SV+  + ++++     + D A
Sbjct: 386 LEHIPNSVRLWRAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468


>gi|163848946|ref|YP_001636990.1| NB-ARC domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222526899|ref|YP_002571370.1| NB-ARC domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163670235|gb|ABY36601.1| NB-ARC domain protein [Chloroflexus aurantiacus J-10-fl]
 gi|222450778|gb|ACM55044.1| NB-ARC domain protein [Chloroflexus sp. Y-400-fl]
          Length = 1634

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 95/329 (28%), Gaps = 55/329 (16%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF-----HNEYLVYLLE-VQIAL 131
            +R+ +        G ++ AA + P AR+ +              H E  V L E  ++A 
Sbjct: 735  RRHRETAVTLHELGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHELGKVAQ 794

Query: 132  AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182
            A   Y  A    E  L I                   L   +   GD  +A+RY  + L+
Sbjct: 795  AAGDYPTARRYYEEALAIKD-DVLGRRHRSTAVTLHALGNLAQEEGDYPTARRYFLEDLE 853

Query: 183  I--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLI 230
            I                 A+ +    A ++  A  +  +      +     +R  A+ L 
Sbjct: 854  ITEAVLGRRHRSTAVTLHALGKVAQAAGDYPTARCYYEEALAIKDDVLGRRHRETAVTLH 913

Query: 231  ARSLENADKGDMIASYHDAIESLKLCDNSI------MASICAA--KSLISQNKKRKAEVI 282
            A        GD   +     E+L + D+ +       A    A  K   +      A   
Sbjct: 914  ALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPTARRY 973

Query: 283  LEKIWKV------NPHPEIANIY------THLLSENTVGKLKRALRLE----EINKESVE 326
             E+   +        H E A              +    +      L      + +   E
Sbjct: 974  YEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRE 1033

Query: 327  SLV---IVSKIALEMGSIDQAHAKAMLAM 352
            + V    + K+A   G    A      A+
Sbjct: 1034 TAVTLHALGKVAQAAGDYPTARRYYEEAL 1062



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 90/312 (28%), Gaps = 57/312 (18%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKM--HSYVSQQHTFHN----EYLVYLLEVQIAL 131
            +R+ +        G ++ AA + P AR+    +   +            +      ++A 
Sbjct: 987  RRHRETAVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQ 1046

Query: 132  AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182
            A   Y  A    E  L I                   L   +   GD  +A+RY  +AL 
Sbjct: 1047 AAGDYPTARRYYEEALAIKD-DVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEALA 1105

Query: 183  IS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLI 230
            I               + +       A ++  A  +  +  +  +      +R  A+ L 
Sbjct: 1106 IKDDVLGRRHRSTAVTLHELGKVAQAAGDYPTARRYFLEDLEITEAVLGRRHRETAVTLH 1165

Query: 231  ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            A        GD   +    +E L+               L  +++        E    ++
Sbjct: 1166 ALGKVAQAAGDYPTARRYFLEDLE----------ITEAVLGRRHR--------ETAVTLH 1207

Query: 291  PHPEIANIYTHLLSENTVGKLKRALRL----EEINKESVESLVIVSKI---ALEMGSIDQ 343
               E+  +      +    +      L      + +   E+ V + ++   A   G    
Sbjct: 1208 ---ELGKV-AQAAGDYPTARRYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPT 1263

Query: 344  AHAKAMLAMKIA 355
            A    +  ++I 
Sbjct: 1264 ARRYFLEDLEIT 1275



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 57/296 (19%)

Query: 91   GLMSIAAHNIPLARKMH------SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
            G ++    + P AR+        +         +  +      ++A A   Y  A    E
Sbjct: 832  GNLAQEEGDYPTARRYFLEDLEITEAVLGRRHRSTAVTLHALGKVAQAAGDYPTARCYYE 891

Query: 145  MMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALDIS-----PDAPWV 190
              L I                   L   +   GD  +A+RY  +AL I            
Sbjct: 892  EALAIKD-DVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRET 950

Query: 191  T---EAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMI 243
                 A+ +    A ++  A  +  +      +     +R  A+ L A        GD  
Sbjct: 951  AVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYP 1010

Query: 244  ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
             +     E+L + D+                ++ +   +            +  +     
Sbjct: 1011 TARRYYEEALAIKDDV-------------LGRRHRETAVTLHA--------LGKV-AQAA 1048

Query: 304  SENTVGKLKRALRLE----EINKESVESLV---IVSKIALEMGSIDQAHAKAMLAM 352
             +    +      L      + +   E+ V    + K+A   G    A      A+
Sbjct: 1049 GDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEAL 1104



 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 28/223 (12%)

Query: 63   RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-----MHSYVSQQHTFH 117
            R+FL    +   +L +R+ +        G ++ AA + P AR+     +    +     H
Sbjct: 1224 RYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPTARRYFLEDLEITEAVLGRRH 1283

Query: 118  NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRI 167
             E  V L E  ++A A   Y  A       L+I                   L   +   
Sbjct: 1284 RETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE-AVLGRRHRETAVTLHALGNLAQEE 1342

Query: 168  GDLNSAQRYATKALDIS-----PDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            GD  +A+RY  +AL I                 A+        ++  A  +  +     +
Sbjct: 1343 GDYPTARRYYEEALAIFEAVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEALAIFE 1402

Query: 220  EW----NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                  +R  A+ L          GD   +     E+L + D+
Sbjct: 1403 AVLGRRHRETAVTLHELGKVAQAAGDYPTARRYYEEALAIKDD 1445



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 98/324 (30%), Gaps = 57/324 (17%)

Query: 63   RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-----MHSYVSQQHTFH 117
            R+FL    +   +L +R+ +        G ++ AA + P AR+     +    +     H
Sbjct: 1140 RYFLEDLEITEAVLGRRHRETAVTLHALGKVAQAAGDYPTARRYFLEDLEITEAVLGRRH 1199

Query: 118  NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRI 167
             E  V L E  ++A A   Y  A       L+I                   L   +   
Sbjct: 1200 RETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE-AVLGRRHRETAVTLHELGKVAQAA 1258

Query: 168  GDLNSAQRYATKALD-----ISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAK 219
            GD  +A+RY  + L+     +          + +       A ++  A  +  +  +  +
Sbjct: 1259 GDYPTARRYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE 1318

Query: 220  EW----NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                  +R  A+ L A      ++GD   +     E+L             A       +
Sbjct: 1319 AVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEAL-------------AIFEAVLGR 1365

Query: 276  KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIV 331
            + +   +            + N+      +    +      L      + +   E+ V +
Sbjct: 1366 RHRETAVTLHA--------LGNL-AQEEGDYPTARRYYEEALAIFEAVLGRRHRETAVTL 1416

Query: 332  SKI---ALEMGSIDQAHAKAMLAM 352
             ++   A   G    A      A+
Sbjct: 1417 HELGKVAQAAGDYPTARRYYEEAL 1440



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 96/324 (29%), Gaps = 57/324 (17%)

Query: 63   RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-----MHSYVSQQHTFH 117
            R+FL    +   +L +R+ +        G ++ AA + P AR+     +    +     H
Sbjct: 1182 RYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPTARRYFLEDLEITEAVLGRRH 1241

Query: 118  NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRI 167
             E  V L E  ++A A   Y  A       L+I                   L   +   
Sbjct: 1242 RETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE-AVLGRRHRETAVTLHELGKVAQAA 1300

Query: 168  GDLNSAQRYATKALD-----ISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            GD  +A+RY  + L+     +            A+        ++  A  +  +     +
Sbjct: 1301 GDYPTARRYFLEDLEITEAVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEALAIFE 1360

Query: 220  EW----NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                  +R  A+ L A      ++GD   +     E+L             A       +
Sbjct: 1361 AVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEAL-------------AIFEAVLGR 1407

Query: 276  KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLV-- 329
            + +   +           E+  +      +    +      L      + +   E+ V  
Sbjct: 1408 RHRETAVTLH--------ELGKV-AQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTL 1458

Query: 330  -IVSKIALEMGSIDQAHAKAMLAM 352
              +  +A E G    A      A+
Sbjct: 1459 HALGNLAQEEGDYPTARRYYEEAL 1482



 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 51/249 (20%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182
           A+  Y  A    E  L I                   L   +   GD  +A+RY  +AL 
Sbjct: 711 ADDNYPTARCYYEEALAIKD-DVLGRRHRETAVTLHELGKVAQAAGDYPTARRYYEEALA 769

Query: 183 IS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIAR 232
           I               + +       A ++  A  +  +      +    R+R+  +   
Sbjct: 770 IKDDVLGRRHRETAVTLHELGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRSTAVTLH 829

Query: 233 SLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           +L N   ++GD   +    +E L+     I  ++          ++ ++  +        
Sbjct: 830 ALGNLAQEEGDYPTARRYFLEDLE-----ITEAVL--------GRRHRSTAVTLHA---- 872

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLV---IVSKIALEMGSIDQ 343
               +  +      +    +      L      + +   E+ V    + K+A   G    
Sbjct: 873 ----LGKV-AQAAGDYPTARCYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPT 927

Query: 344 AHAKAMLAM 352
           A      A+
Sbjct: 928 ARRYYEEAL 936



 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 45/139 (32%), Gaps = 23/139 (16%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVYLLE-VQIAL 131
            +R+ +        G ++    + P AR+ +              H E  V L E  ++A 
Sbjct: 1365 RRHRETAVTLHALGNLAQEEGDYPTARRYYEEALAIFEAVLGRRHRETAVTLHELGKVAQ 1424

Query: 132  AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182
            A   Y  A    E  L I                   L   +   GD  +A+RY  +AL 
Sbjct: 1425 AAGDYPTARRYYEEALAIKD-DVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEALA 1483

Query: 183  ISPDAPWVTEAVVQQYVLA 201
            I        EAV+ +    
Sbjct: 1484 I-------FEAVLGRRHRE 1495


>gi|74007676|ref|XP_858769.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform
           7 [Canis familiaris]
          Length = 943

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|186685791|ref|YP_001868987.1| hypothetical protein Npun_F5744 [Nostoc punctiforme PCC 73102]
 gi|186468243|gb|ACC84044.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 280

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 4/158 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A       L+I      A  +L      +     A +  ++A+ ++P+  
Sbjct: 102 AYFDLGDKEKAIADYNQALRINPNDAEAYNNLGNARASLEGNREAVKDYSEAIRLNPNYA 161

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                         +   AI  L Q  +    +    AI    R    A  GD   +  D
Sbjct: 162 EAYNNRGNARAANGDRKGAIDDLGQAIRLNPRY----AIAYNNRGNARAANGDPKGAIAD 217

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             ++++L  N   A      +  +   ++ A   LEK 
Sbjct: 218 YNQAIRLNPNFAPAYNNRGNARATNGDRQGALKDLEKA 255


>gi|332534327|ref|ZP_08410170.1| hypothetical protein PH505_bf00250 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036237|gb|EGI72710.1| hypothetical protein PH505_bf00250 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 478

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 108/327 (33%), Gaps = 55/327 (16%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           + A N      + +    +    +   + LL  Q+ L+ + +N A       L+      
Sbjct: 89  LQAGNYSE---VAALFKGRDISQDSTALNLLRAQVLLSTKDFNNAELAYLACLKASPDLV 145

Query: 155 FAVYSL----YFESCRIGDL-----------NSAQRYA-------------------TKA 180
            A   L      ++                   AQ YA                    +A
Sbjct: 146 KAHQGLSLLYMQQAKYDKAQIHLVHSIELGQADAQSYAQLAYIHVQHSQPWSAVAAYRQA 205

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L ++P+     + ++   + + + S+A   L +    + +    +A L + R+       
Sbjct: 206 LMLAPETSQYQQGLLFALIESGDLSQANALLKELLNKSPD----KAELWLQRAQIALQLD 261

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------ 294
               +      +LKL        + AA+  +++    +A  +L++  K     +      
Sbjct: 262 QKKQALAAIEVALKLNPKDTSNQLLAAQLHLTEGSTERAVSLLKQGLKHATKQQQVEVIN 321

Query: 295 -----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAK 347
                +  + +    +     +  A RL +      ++   V  ++IA++ G+  +A   
Sbjct: 322 TTMQTLGWLVSQQKWDLAKDLIGSAKRLTKQLPRDEQAQFSVYSAQIAMQQGNTKRALKS 381

Query: 348 AMLAMKIAPRKEIFLL-LAQIEQANSH 373
              A+KI P     LL LA I ++   
Sbjct: 382 LNNALKINPNLGDALLSLASIYRSKGQ 408



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 84/242 (34%), Gaps = 15/242 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +     + A+  L+ +L   P   E  +      + ++     A      AL ++P  
Sbjct: 222 ALIESGDLSQANALLKELLNKSPDKAELWLQ-RAQIALQLDQKKQALAAIEVALKLNPKD 280

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE-NADKGDMIASY 246
                   Q ++      RA++ L Q  K+A +  +   I    ++L     +     + 
Sbjct: 281 TSNQLLAAQLHLTEGSTERAVSLLKQGLKHATKQQQVEVINTTMQTLGWLVSQQKWDLAK 340

Query: 247 HDAIESLKLCDNS-----IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
                + +L            S+ +A+  + Q   ++A   L    K+N  P + +    
Sbjct: 341 DLIGSAKRLTKQLPRDEQAQFSVYSAQIAMQQGNTKRALKSLNNALKIN--PNLGDALLS 398

Query: 302 L----LSENTVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIAP 356
           L     S+  + + K      +   +   S  + +S+IA++      A      A++  P
Sbjct: 399 LASIYRSKGQLTQAKLMYVRAQALPDYQLSAWLGLSQIAIDSKDYPSALKHLRKALQADP 458

Query: 357 RK 358
           ++
Sbjct: 459 QR 460


>gi|294508725|ref|YP_003572784.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
 gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
          Length = 554

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 8/224 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G       ++  A  + SY         +   Y         +     A    E  L +
Sbjct: 332 RGNAEANQGDLEAA--VESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDL 389

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            +    A Y L            A      A+++  + P    A         +   A+ 
Sbjct: 390 KSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALE 449

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                 ++A   + +        +    +K     +     ++L+L   S       AK+
Sbjct: 450 ----SYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKA 505

Query: 270 LISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKL 311
           L++  +  ++   L+  ++++P    E    Y  L   + V +L
Sbjct: 506 LLALGRADESIRALKTAFRLDPAKKEEFQKAYPTLYDNDRVRRL 549


>gi|39998281|ref|NP_954232.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39985227|gb|AAR36582.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|298507217|gb|ADI85940.1| TPR domain protein [Geobacter sulfurreducens KN400]
          Length = 638

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 37/271 (13%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           + L  G   +AA   P A + +    ++     E L  L   Q A      + A      
Sbjct: 267 EYLRRGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQAA--AGLDDDAIASYRE 324

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           +L++        Y+L     R G ++ A     +A+ +S +       +   Y L     
Sbjct: 325 LLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHP 384

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +AI    +  K       +  +L +  +       +   +     E+LKL  +++ A   
Sbjct: 385 QAIEQYRELLKRGD----SNPVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEA--- 437

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
                                     H E+A +Y  L   +     K+   +  I K+  
Sbjct: 438 --------------------------HRELAAVYRKLNQMDDAS--KQYREVLRIKKDDA 469

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           E+  I++ I ++    D+        +++AP
Sbjct: 470 EARNILTAIYVKEKKYDELVPLLQEGVELAP 500



 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 4/188 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + +  Y        +  +++L   +  ++ +    A       L++      A   L   
Sbjct: 385 QAIEQYRELLKRGDSNPVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAV 444

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             ++  ++ A +   + L I  D       +   YV  K++   +  L    +   E   
Sbjct: 445 YRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYVKEKKYDELVPLL----QEGVELAP 500

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A+      L +  + D  ++     ++ +L D+   A     +  +   K  +A+  L
Sbjct: 501 NDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKALNALGRIYLKTGKLTEAKEAL 560

Query: 284 EKIWKVNP 291
           E   K +P
Sbjct: 561 EAAKKADP 568


>gi|156743163|ref|YP_001433292.1| hypothetical protein Rcas_3220 [Roseiflexus castenholzii DSM 13941]
 gi|156234491|gb|ABU59274.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM
            13941]
          Length = 1178

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 9/257 (3%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
             L  +    +  A +      ++   + E LV L    IAL       A+++    LQ  
Sbjct: 863  ALAYLGIGRLDAADESARRALERQPIYPEALVLL--GDIALQRGDSQAANQQYRAALQQN 920

Query: 151  ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 A   L   +   G+ + A  +   A+   P +P     + +  V   +   AI+ 
Sbjct: 921  PALAAAHIGLGRVAAVGGNWSIAAGHFLNAVQADPQSPDAFLWLGEARVRVGDVDDAISA 980

Query: 211  LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              Q  +    +       L   +      G +  +  +   +L+       A +   K  
Sbjct: 981  YQQALQLRSAFPE----ALFGLAQAQFGAGRIDEALRNVNRALEQRSRYAEAFLLLGKIY 1036

Query: 271  ISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
              Q    +A    ++    NP    P        + ++              +     E+
Sbjct: 1037 EQQGYSTRALDAYKQAVDANPRLAEPHFRRALLLIRADRLSEARDDLEIAARLEPNFAEA 1096

Query: 328  LVIVSKIALEMGSIDQA 344
               + ++     +   A
Sbjct: 1097 HYWLGRVYFAQRNFQAA 1113



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 25/234 (10%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI- 227
            +   A     +A+   P       A+ +          A+ +L   + +A + +  RA+ 
Sbjct: 837  EYAPAVTAYERAIAQQPG-----NAIFRYRA-------ALAYLGIGRLDAADESARRALE 884

Query: 228  -------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                    L+        +GD  A+      +L+       A I   +          A 
Sbjct: 885  RQPIYPEALVLLGDIALQRGDSQAANQQYRAALQQNPALAAAHIGLGRVAAVGGNWSIAA 944

Query: 281  VILEKIWKVNPH-PE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
                   + +P  P+  +      +   +    +    +  ++     E+L  +++    
Sbjct: 945  GHFLNAVQADPQSPDAFLWLGEARVRVGDVDDAISAYQQALQLRSAFPEALFGLAQAQFG 1004

Query: 338  MGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             G ID+A      A++   R  E FLLL +I +     + + L   + A+ A P
Sbjct: 1005 AGRIDEALRNVNRALEQRSRYAEAFLLLGKIYE-QQGYSTRALDAYKQAVDANP 1057


>gi|307257053|ref|ZP_07538828.1| hypothetical protein appser10_10540 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307261491|ref|ZP_07543160.1| hypothetical protein appser12_10510 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306864424|gb|EFM96332.1| hypothetical protein appser10_10540 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306868774|gb|EFN00582.1| hypothetical protein appser12_10510 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 409

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ +I     +S     V I    ++   S  +++      +     +  +   F  
Sbjct: 2   LLLLASLIFG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  +   A K+ S  ++     +E ++ L++ 
Sbjct: 61  LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
            + A        A++                  L   +   G  N A   A   + +   
Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160

Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             P A    +++++        +  +       K++K +N    IL
Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203


>gi|32033977|ref|ZP_00134233.1| COG3071: Uncharacterized enzyme of heme biosynthesis
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 409

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ +I     +S     V I    ++   S  +++      +     +  +   F  
Sbjct: 2   LLLLASLIFG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  +   A K+ S  ++     +E ++ L++ 
Sbjct: 61  LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
            + A        A++                  L   +   G  N A   A   + +   
Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160

Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             P A    +++++        +  +       K++K +N    IL
Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203


>gi|224098648|ref|XP_002189786.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), partial [Taeniopygia
           guttata]
          Length = 1034

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 96  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 153

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 154 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 208

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 209 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 264

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 265 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPTHADSLNNLAN 324

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 325 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 382



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 289 ANALKEKGSVVEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 348

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 349 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 404

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 405 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 462

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 463 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 498



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 28/223 (12%)

Query: 149 IPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKE 203
            P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       +
Sbjct: 2   EPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLD 61

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            S   + L  K+      N   A           ++G +  +      +L+L  + I   
Sbjct: 62  RSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 115

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322
           I  A +L++      A        + N  P++     + +  +    LK   RLEE    
Sbjct: 116 INLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKAC 168

Query: 323 --ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
             +++E+     V+   L       G I  A      A+ + P
Sbjct: 169 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 211


>gi|182416089|ref|YP_001821155.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177843303|gb|ACB77555.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 715

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 7/205 (3%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G    A  +  +AL I PD P     +    +       AI  L +      
Sbjct: 485 LAMLLTESGRPAEAIPHLEQALRIRPDYPQAMSNLGDDLIRLGRSREAIPHLERALALQP 544

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++   +A   +  +L   D+     +      +++L     MA      +L   ++ R+A
Sbjct: 545 DY--VQAHNNLGTALLTLDRA--AEAIAHFERAVQLDPRYTMAHYNLGLALAQTDRVREA 600

Query: 280 EVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
               E++  + P   H E++  Y    ++     ++   R  E+  +SVE+    +++  
Sbjct: 601 IPHFERVVTLQPTHAHAELSLAYALASTDRFSESIRHFERALELEPDSVEAHQTYARMLA 660

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361
             G +DQA       +++ P+    
Sbjct: 661 RHGQLDQALPHFRAVVELMPQSGAA 685


>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 466

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 76/268 (28%), Gaps = 33/268 (12%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             GL      ++  A +  S V + +                  +  ++ A      +++
Sbjct: 201 SRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGS--RGLSYAMKGDWDKAVSDFSELIK 258

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +  T      S        G L+ A    ++A+ ++             YV   +W +AI
Sbjct: 259 LKPTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAI 318

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              ++  +         A     R      KG+      D  E+L+L             
Sbjct: 319 ENFSKSIQLNP----QDADAFAKRGYAYYQKGEYQKGIDDINEALRLNP----------- 363

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVES 327
                   + AE      W     P+       +   +  V   K+A  L    +     
Sbjct: 364 --------KDAESYNNLAWFRATCPD-----ASMRKGKEAVEAGKKACELTNWKEWHCIG 410

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +  +    E G  +QA      AM +A
Sbjct: 411 TLAAAYA--ETGDFEQAVKYQKQAMGVA 436



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 85/265 (32%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
            +  LA    S V +    ++              +  +        E +   P  R + 
Sbjct: 41  GDYELAISCWSSVLKLQPTNDAAFFN--RGMAYTQKGDFTSGIHDFDETIRLNPEGRAYD 98

Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               LY +    G++  A    T+A+ ++P   W        Y    +  +AI+   Q  
Sbjct: 99  NRGNLYDQK---GEVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQAI 155

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +         A    +R    A K D   +  D  + +KL    + A      +   +  
Sbjct: 156 QINP----KDANYYDSRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGD 211

Query: 276 KRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330
             KA   L ++ K+N  P+ A  Y     ++ +  +    +     L ++          
Sbjct: 212 MDKAIRDLSEVIKLN--PKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLKPTDSIGYDS 269

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIA 355
            +      G +D+A A    A+K+ 
Sbjct: 270 RATAYQNQGKLDEALADFSEAIKLN 294


>gi|254282077|ref|ZP_04957045.1| TPR domain protein [gamma proteobacterium NOR51-B]
 gi|219678280|gb|EED34629.1| TPR domain protein [gamma proteobacterium NOR51-B]
          Length = 405

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 96/292 (32%), Gaps = 32/292 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPAT-RE 154
             +  A ++H  +  + +     L   +L   +  ++   ++ A   L  ++      R 
Sbjct: 86  GEVERAIRIHQNLLARPSLPAAQLHLAHLELARDYISAGLFDRAERLLLDLVSESGNHRR 145

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A   L        D +SA+  A     + P      + ++ Q  +  +           
Sbjct: 146 VAQRHLIEIYEAQSDWDSAREVAE---ALLPK-----KTLLTQPAVEAD----------- 186

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +  +  N   A     ++    + GD+ A+     ++LK   + + AS+  A      +
Sbjct: 187 -EVGQPVNLILAHFCCEQAESPQEMGDLSAARKLLDQALKYDGDCVRASMMLADIEFRTS 245

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              ++  +L+ +      +     P +   Y+ +  +                  +   +
Sbjct: 246 NFSRSLKLLKSVQDQDADFVPETVPALRACYSAI--DKRPQFRNYLESCFRARPST-MLV 302

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + +++   +  S + A      +++  P      +L  +  A+   TD+ L 
Sbjct: 303 LAIAQELSDTESPESAKQFLRESLREKPTLRGLAMLMSLHDADEAGTDEALE 354


>gi|15668437|ref|NP_247235.1| hypothetical protein MJ_0263 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3915922|sp|O06917|Y263_METJA RecName: Full=TPR repeat-containing protein MJ0263
 gi|1499043|gb|AAB98249.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 320

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 17/242 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            N   A  +      Q    +  LV  ++  +   +     A +  E +  I  T   ++
Sbjct: 26  GNFDKA--LEYLEKAQKVDKDNPLVLYVKGIVLKLKGDMEKAEKYFECLENIEGTSLLSL 83

Query: 158 YSLYFESCRIGDLNSAQRYATKALDIS-P-DAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +L   +   G+     +Y  K   +S P       +A++  Y+   E+ +A+  L++  
Sbjct: 84  GNLICLTFVKGEYERTLKYIEKLSRLSKPCYLSPFHKALI--YIEFGEFEKALEALDEFL 141

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K           +L  ++      G +  +     + L +  +   A     + L     
Sbjct: 142 KIYPNLTS----ILRQKASILEILGKLDEALDCVNKILSIKKDDAHAWYLKGRILKKLGN 197

Query: 276 KRKAEVILEKIWKVNP---H--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++A   L+    +N    H   +IA  Y  L + N    L    +  E     VE+   
Sbjct: 198 IKEALDALKMAINLNENLVHVYKDIA--YLELANNNYEEALNYITKYLEKFPNDVEAKFY 255

Query: 331 VS 332
           ++
Sbjct: 256 LA 257


>gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 546

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 26/264 (9%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
              N    Y L  Q+ L+E + + A E L+  L I  T E A  +L     R    + A+
Sbjct: 147 LSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDIRKTFEAAFVTLGKIYERSERFSEAE 206

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIA 231
           +     L   P+     E + Q Y+       A     +  +       +    A+ L+ 
Sbjct: 207 KLYRSILKEDPNNRSALEKLAQLYMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQ 266

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                   G+   +     E  +L    +  S   A +L       KA  I EK+ K+ P
Sbjct: 267 S-------GEFERAKEILAELYRLHPEDLNVSYSYALALELTGNPEKALEIYEKLHKLVP 319

Query: 292 HPE-----IANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSID 342
             +     +AN Y  L      G+ K A  L     ++N  +V+ L++ + + ++    +
Sbjct: 320 KNQRIIERLANTYIIL------GRYKEAEELIEKGLQLNPANVKLLMLKANLYIDEKRYE 373

Query: 343 QAHAKAMLAMKIAPRK-EIFLLLA 365
           +A      A+ +APR+   + L A
Sbjct: 374 EAVKVLDRAISLAPREYRAYFLKA 397



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+YS+Y      GD   A     KA    P    +   +  +Y+ +     A   L + 
Sbjct: 88  IALYSIYRLK---GDRKKAIEVLEKARKKFPKNKEIFIFLADEYIKSGRMKEAKEVLQRF 144

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            + +        +L          +G +  +      +L +      A +   K      
Sbjct: 145 AELSPNNPFPYYLL----GQLYLSEGKVDRAIEYLQRALDIRKTFEAAFVTLGKIYERSE 200

Query: 275 KKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           +  +AE +   I K +P+      ++A +Y  + +       +   RL  I+  + +   
Sbjct: 201 RFSEAEKLYRSILKEDPNNRSALEKLAQLY--MATGRIQEAKELYERLYRIDPTNYQYKH 258

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +   L+ G  ++A        ++ P
Sbjct: 259 QFAVTLLQSGEFERAKEILAELYRLHP 285



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 11/193 (5%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A   A + +   P+      A+   Y L  +  +AI  L + +K   ++ +N+ I +
Sbjct: 66  TKKALELAQEYMKRYPNRAEPYIALYSIYRLKGDRKKAIEVLEKARK---KFPKNKEIFI 122

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              + E    G M  +        +L  N+        +  +S+ K  +A   L++   +
Sbjct: 123 F-LADEYIKSGRMKEAKEVLQRFAELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDI 181

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               E     +  IY      +   KL R   + + +  +  +L  ++++ +  G I +A
Sbjct: 182 RKTFEAAFVTLGKIYERSERFSEAEKLYR--SILKEDPNNRSALEKLAQLYMATGRIQEA 239

Query: 345 HAKAMLAMKIAPR 357
                   +I P 
Sbjct: 240 KELYERLYRIDPT 252



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 11/140 (7%)

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----I 295
           +   +   A E +K   N     I        +  ++KA  +LEK  K  P  +     +
Sbjct: 65  NTKKALELAQEYMKRYPNRAEPYIALYSIYRLKGDRKKAIEVLEKARKKFPKNKEIFIFL 124

Query: 296 ANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           A+ Y      +     L+R     E++  +     ++ ++ L  G +D+A      A+ I
Sbjct: 125 ADEYIKSGRMKEAKEVLQRF---AELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDI 181

Query: 355 APR-KEIFLLLAQI-EQANS 372
               +  F+ L +I E++  
Sbjct: 182 RKTFEAAFVTLGKIYERSER 201


>gi|119485063|ref|ZP_01619448.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119457291|gb|EAW38416.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 612

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 82/231 (35%), Gaps = 28/231 (12%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNR 223
            G    A++Y  KA++I PD       +   Y   K W +AI    +  K   NA  + R
Sbjct: 58  QGQEEEAKQYYLKAVEIQPDLAESYANLGSIYTKQKNWQKAIETYKKVVKIQPNAATYYR 117

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEV 281
           N A +L               +     ++LKL  +       +     L+   K   A  
Sbjct: 118 NIAQILTQL-------NQQEEATQYWYQALKLEPDWATPEEHLTLGNMLLKFEKPLPAIT 170

Query: 282 ILEKIWKVNP------HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKI 334
             ++  K+ P      H  +   ++ L   +  +   K+AL L   N  S  +   ++  
Sbjct: 171 CYQRTIKLKPASFEAAH-NLGEAFSQLERWQEAIENYKKALEL---NPSSAVTYQRLADT 226

Query: 335 ALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHNTDKILY 380
            + + S D A      ++++ P      ++I  LL Q EQ        +  
Sbjct: 227 FMRLKSWDVALENYKKSLELDPNSFQVYQKIAQLLLQQEQYEPAIQAYLRA 277


>gi|213410593|ref|XP_002176066.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces
           japonicus yFS275]
 gi|212004113|gb|EEB09773.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces
           japonicus yFS275]
          Length = 638

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 11/203 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+      +  A +      ++  T  +    L     +  ++  A +      +  P
Sbjct: 433 RAQVHFISGDFAKAIKDYRKSNELDDTFIYGYIQLAVAQYKSNEVEEAVKTFEMCKERFP 492

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENA-DKGD 241
           D+  V     +  +  +++  A+   ++     K     N   A+ LI ++L     K D
Sbjct: 493 DSGEVYNYYGEILLDQQKFDEALDHFDRAIELGKKKSAQNVMNAMPLINKALTVFQAKRD 552

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +     ++L       +A    A+ L+ Q K  +A    EK        ++A   + 
Sbjct: 553 VDQAEKLCQQALDADPECDIAVASMAQFLLQQGKPVEALKYFEKS------ADLARTESE 606

Query: 302 LLSENTVGKLKRAL-RLEEINKE 323
           +++  +  +  R    L +   E
Sbjct: 607 MVNAFSYSEATRTQIALTDRYPE 629


>gi|319790334|ref|YP_004151967.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
 gi|317114836|gb|ADU97326.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
          Length = 265

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 58/166 (34%), Gaps = 9/166 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL  A+    KAL + P+       +   Y        A     +   N       
Sbjct: 90  LKRGDLKRARENLQKALRLKPNFSEAWLNLGMLYEEEGNLKEARRCYEKALSNPLYLTPE 149

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-- 282
            A   +  +L +  +G++  +  +   +++   + + A +  AK    +    +A+ +  
Sbjct: 150 VAYYHL--ALLDEKEGNLKGAKRNLALAIRNNPDYVPAYVEFAKIFEKEGDYGRAQDLYF 207

Query: 283 -LEKIWKVNPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            L  ++    +P   +  +Y  +   +    +K   +   +N  + 
Sbjct: 208 RLINLYPNLQYPYCALGKLYLKVGDRDNG--VKFLRKCVNVNPTTP 251



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 70/215 (32%), Gaps = 13/215 (6%)

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P  +    Y +      +G++  A  Y  KA  + P+ P +  A+   ++   +  RA  
Sbjct: 41  PKEKAQGYYQIAVAYLNLGEIPLALNYLYKAKKLEPNDPKIYNALGLAFLKRGDLKRARE 100

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--ASICAA 267
            L +  +    ++       +   +   ++G++  +     ++L          A    A
Sbjct: 101 NLQKALRLKPNFSE----AWLNLGMLYEEEGNLKEARRCYEKALSNPLYLTPEVAYYHLA 156

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRAL-RLEEINK 322
                +   + A+  L    + N  P+    Y         E   G+ +    RL  +  
Sbjct: 157 LLDEKEGNLKGAKRNLALAIRNN--PDYVPAYVEFAKIFEKEGDYGRAQDLYFRLINLYP 214

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                   + K+ L++G  D         + + P 
Sbjct: 215 NLQYPYCALGKLYLKVGDRDNGVKFLRKCVNVNPT 249



 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 62/221 (28%), Gaps = 40/221 (18%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y AL  GL  +   ++  AR+      +     +E  + L    +   E     A    E
Sbjct: 82  YNAL--GLAFLKRGDLKRARENLQKALRLKPNFSEAWLNL--GMLYEEEGNLKEARRCYE 137

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             L  P         LY                     ++P+  +   A++ +       
Sbjct: 138 KALSNP---------LY---------------------LTPEVAYYHLALLDEK--EGNL 165

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A   L    +N  ++        +  +     +GD   +       + L  N      
Sbjct: 166 KGAKRNLALAIRNNPDY----VPAYVEFAKIFEKEGDYGRAQDLYFRLINLYPNLQYPYC 221

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
              K  +    +      L K   VNP   +A   T LL E
Sbjct: 222 ALGKLYLKVGDRDNGVKFLRKCVNVNPTTPLAADATRLLEE 262


>gi|120600515|ref|YP_965089.1| HemY domain-containing protein [Shewanella sp. W3-18-1]
 gi|146294673|ref|YP_001185097.1| HemY domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120560608|gb|ABM26535.1| HemY domain protein [Shewanella sp. W3-18-1]
 gi|145566363|gb|ABP77298.1| HemY domain protein [Shewanella putrefaciens CN-32]
          Length = 388

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 128/384 (33%), Gaps = 32/384 (8%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLFAVSRFFLSC-PAMLFHMLH 77
            +      V IT G+    TS    +  L  F   + +L + V         +       
Sbjct: 20  WLVGNTGYVYITAGDYQIETSLVFGVIALIVFYAVFQVLEWLVITAINLILRSRFIPYHW 79

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIAL--AER 134
           +R   K +  +  G +++A  + P A R M              L      Q     AER
Sbjct: 80  RRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPALNLLAAARAAQYQQKIAER 137

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
              +     + +     T   A Y L     + G+L  A+    K    S     V +  
Sbjct: 138 DQYLDRAASQPLAANAVTTTRARYLL-----KQGELALARVELDKLSPTSKSKAPVLKLA 192

Query: 195 VQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI------- 243
           +  Y   ++W            ++  + +++N    +   A     A K +         
Sbjct: 193 LDLYQAQQDWDALKLLLPILKKRQLIDDEKFNELNIVTHCALLKAAATKSEAALEECWQW 252

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            S  +  +S  L           A +L   N+K +A  +L K  +  P   +  +   + 
Sbjct: 253 LSRSERNQSEYLA--------IYAIALCRFNRKDEAMKLLLKKLRSAPDTALLKVIPDIT 304

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           +   +   K+ L+ E  ++ + +  + ++K+  +   + +A        ++ P K+ +L 
Sbjct: 305 TAQDMDIRKQLLKYEVTHENNADYQICLAKLYQQTREMKEAKTCWQNVCRLEPTKDAWLA 364

Query: 364 LAQIEQANSHNTDKILYWTQSALH 387
           LA+I++             + A +
Sbjct: 365 LARIQE-QLGEQGYANQSYRQAAN 387


>gi|149048929|gb|EDM01383.1| rCG29705 [Rattus norvegicus]
          Length = 519

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A    +  LQ+      A+++L            A     +++   PD     
Sbjct: 163 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 222

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L    ++   D G    +     +
Sbjct: 223 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 278

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +++L  +  +A +   +   S  +        R+A  +      ++P   +  +Y +  +
Sbjct: 279 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 333

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                 L+       +     +  + ++++   MG   +A       +   PR  E + L
Sbjct: 334 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 393

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H  +K L   + AL     DP
Sbjct: 394 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 422


>gi|320539403|ref|ZP_08039072.1| putative protoheme IX synthesis protein [Serratia symbiotica str.
           Tucson]
 gi|320030528|gb|EFW12538.1| putative protoheme IX synthesis protein [Serratia symbiotica str.
           Tucson]
          Length = 348

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 3/192 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   ++ ++   +   + +  V R      A        R 
Sbjct: 21  LAGHQGYVLIQTDNYNIETSVTGLVIMVLLLVVMLMAIEWVLRHIFRTGARTRGWFIGRK 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +        L+ +A  +      + +  +         + YLL  + A         +
Sbjct: 81  RSRARAQTNAALIKLAEGDYKQVESLLTRNADHA--EQPMVNYLLAAEAAQQRGDDFRTN 138

Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           + LE   ++  T +  V  +        G+ ++A+    + L+ +P  P V     Q Y+
Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGEDHAARHGVDRLLNQAPRHPEVLRLAEQAYL 198

Query: 200 LAKEWSRAITFL 211
               ++  +  L
Sbjct: 199 RTGAYNSLLEIL 210


>gi|302343326|ref|YP_003807855.1| hypothetical protein Deba_1896 [Desulfarculus baarsii DSM 2075]
 gi|301639939|gb|ADK85261.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
           2075]
          Length = 583

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 104/313 (33%), Gaps = 53/313 (16%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCR 166
           + V    +   + L      Q+AL     N A E L   +   P +       L+ E  R
Sbjct: 35  AKVDAPVSSLTDSLALYGAAQMALENGDTNKALELLRQGIKIDPKSAF-----LHIEVSR 89

Query: 167 I----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           I    G  + A++ A +A++++P+       +   Y   ++ + A+    +      +  
Sbjct: 90  ILLGVGRTDEAEKEARQAIELNPELVDGWLLLGGIYSSRQDLNNAVKAFERATTLDPDQE 149

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             R  L         D+G M  +     + +KL     +A     ++L S  + R+AEV 
Sbjct: 150 EARLYLGTLY----MDQGRMEQAVQVLRDLVKLRPRLALARYYLGQALASLRRYRQAEVQ 205

Query: 283 LEKIWKVNPH-----PEIANIY----------------THLLSENTV--GKLKRA----- 314
           L+    + P+      E+  +Y                  L  ++T    +L R      
Sbjct: 206 LKAALLIAPNFEAVLFELGAVYEMQHKYRDAEATYLRVLDLNPDSTAGHDRLGRFYLSTG 265

Query: 315 ---LRLEEINK------ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLL 363
                L E         +  E  + +  +  E G  +QA  +     K  P   +  + L
Sbjct: 266 RYQEALREFAVVKGLSRDDSEVRLKIGLVYYEQGKYNQAAEEFRAIAKDEPDNHRARYYL 325

Query: 364 LAQIEQANSHNTD 376
              ++     +  
Sbjct: 326 GVSLQDGGKGDQA 338



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 197 QYVLAKEWSRAITFLNQ-----------KKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
               A  W  A+  L              K +A   +   ++ L   +    + GD   +
Sbjct: 7   FKRAAALWGLALMLLTAGCATVTPQAPPAKVDAPVSSLTDSLALYGAAQMALENGDTNKA 66

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS- 304
                + +K+   S    I  ++ L+   +  +AE    +  ++N  PE+ + +  L   
Sbjct: 67  LELLRQGIKIDPKSAFLHIEVSRILLGVGRTDEAEKEARQAIELN--PELVDGWLLLGGI 124

Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
               ++    +K   R   ++ +  E+ + +  + ++ G ++QA       +K+ PR  +
Sbjct: 125 YSSRQDLNNAVKAFERATTLDPDQEEARLYLGTLYMDQGRMEQAVQVLRDLVKLRPRLAL 184

Query: 361 FL 362
             
Sbjct: 185 AR 186


>gi|256822126|ref|YP_003146089.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069]
 gi|256795665|gb|ACV26321.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069]
          Length = 391

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 72/177 (40%), Gaps = 11/177 (6%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+Y L  +   +G  + A    T+ L+       
Sbjct: 86  GEVDRAIRLHQNLIARPQLSSDDRNTALYQLGLDYNAVGMYDRAVSLFTELLEDPEHKSE 145

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y L K+W +A     Q + +  +E ++  A      + +   +GD+ A+  +
Sbjct: 146 SLHQLLNIYQLTKDWDQAAKVAEQLQSSMGEEQSKPLAHFYCELADQKRSEGDIKAALAN 205

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK--IWKVNPHPEIANIY 299
             + L +  +S+ ASI      + Q   ++A    + IL++   +     P+IA  Y
Sbjct: 206 LKKGLSINPDSVRASILQGDIYLQQKSFKQAIKSYQRILKQDIAFLPEALPKIAEAY 262


>gi|217970045|ref|YP_002355279.1| PEP-CTERM system TPR-repeat lipoprotein [Thauera sp. MZ1T]
 gi|217507372|gb|ACK54383.1| PEP-CTERM system TPR-repeat lipoprotein [Thauera sp. MZ1T]
          Length = 924

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 98/306 (32%), Gaps = 18/306 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT- 152
           ++       A +      +      E L  L    +        +           P T 
Sbjct: 74  ALQLGEADKAERDARKAIEYGFSRTEALPLLARAILMQQAPDRVLTELS-TAPTDAPDTM 132

Query: 153 --REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                ++          G+L++A+    KA  + P  P     +     L K++  A   
Sbjct: 133 QAEYASLRGTAL--LLKGELDAAEPEFGKAHKLDPALPEAIVGLALAQSLRKQYDEARKT 190

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIMASICAAKS 269
           L    +         ++L      +   + +   +   A  ++++   +  +     A +
Sbjct: 191 LAPALERTPPVADAWSLL-----GDIETEQERFDAAETAFGQAIRARAHVTLERAKRALA 245

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK----RALRLEEINKESV 325
            + Q K  +AE  L  +  ++ HP     Y   LS     +L+            +    
Sbjct: 246 RVRQGKFAEAEADLNALGALSRHP--YAQYVTGLSHFRQQRLREAADAFELSLAADPNFA 303

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            + V ++   L +G  +QA A A      AP+     LL  I QA   +  +     ++A
Sbjct: 304 PNRVYLAITRLMLGQQEQALAHAEFIRAAAPQASGANLLLGIAQAGHADYGQARKTLEAA 363

Query: 386 LHAMPD 391
           L + PD
Sbjct: 364 LASEPD 369



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 82/294 (27%), Gaps = 18/294 (6%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             + +  L     ++A        +  + ++             +       +++   A 
Sbjct: 230 RARAHVTLERAKRALARVRQGKFAEAEADLNALGALSRHPYAQYVTGLSHFRQQRLREAA 289

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +  E+ L            L      +G    A  +A      +P A      +      
Sbjct: 290 DAFELSLAADPNFAPNRVYLAITRLMLGQQEQALAHAEFIRAAAPQASGANLLLGIAQAG 349

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             ++ +A   L     +  +        L   +  +  +GD   +   A     L  +S 
Sbjct: 350 HADYGQARKTLEAALASEPD----NVTNLQLLATLSLLQGDSKTALSHAQRLATLRPDST 405

Query: 261 MAS--ICAAKSLISQNKKRKAE---VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            A   +  A+ +               L+  +           +            KRA 
Sbjct: 406 GAINLLMMAQLMSGAEVPEPTAGQVDALQAEFMQA-----LEAFRDKRFGEAT---KRAE 457

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIE 368
            L   + E +  + +++ + L  G   +A  +    ++  P      + LA++E
Sbjct: 458 ALRAAHPEQIGPINLLAALYLSTGQWPKARKELETVLQRQPADATARINLAKLE 511



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 25/283 (8%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y A+   +  +      LA       +            LL          Y  A + LE
Sbjct: 308 YLAITRLM--LGQQEQALAHAEFIRAAA----PQASGANLLLGIAQAGHADYGQARKTLE 361

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             L         +  L   S   GD  +A  +A +   + PD+      ++   +++   
Sbjct: 362 AALASEPDNVTNLQLLATLSLLQGDSKTALSHAQRLATLRPDSTGAINLLMMAQLMSG-- 419

Query: 205 SRAITFLNQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLC--DNSIM 261
                     +       +  A+     ++LE         +   A E+L+    +    
Sbjct: 420 ---------AEVPEPTAGQVDALQAEFMQALEAFRDKRFGEATKRA-EALRAAHPEQIGP 469

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLK-RALRLE 318
            ++ AA   +S  +  KA   LE + +  P    A I    L   +    ++K     L 
Sbjct: 470 INLLAA-LYLSTGQWPKARKELETVLQRQPADATARINLAKLELQDRNFQRIKELVSPLV 528

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             +  +    +++      + +   A       +K  P   + 
Sbjct: 529 LASPSAEAPALLLVAAEHGLQNDVAADQVLEQLVKSNPSATLA 571


>gi|161501869|ref|YP_052459.2| cellulose synthase subunit BcsC [Pectobacterium atrosepticum
           SCRI1043]
          Length = 1189

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 109/315 (34%), Gaps = 40/315 (12%)

Query: 91  GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYL-------VYLLEVQIALAERQYNI 138
           GL+ + A +   A     + + + V++ ++   E L         + E   AL      +
Sbjct: 344 GLVYLRAGDRVKALAQFQKALQADVNRLNSGKWEGLIQSTQYWTTITEGDNALKANNLPL 403

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   Q+  T  +A+  L   +    +  +AQ    +AL + P        +V  Y
Sbjct: 404 ARQKYQQARQMDNTNAYALIGLGDVAVASKNDAAAQPLYQQALQLEPGNDNALRGLVGIY 463

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----ARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN   ++ +   R    LL       ++ +  ++     +     +  
Sbjct: 464 QRQSP-EKALAYLNSLPRSQQNTMRETLALLQLDILKQQADQLLEQQQWALAEEKYRQVN 522

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENT 307
           +   N I  +   A+ L  + K + A+ ++++     P P  A       +Y    + + 
Sbjct: 523 QQDPNDIWFAYRYAQVLRQRGKPQLADSVVQRA-TAVP-PASAEKNYVYSLYLSSTNRDE 580

Query: 308 VGKLKRALRL--EEINKE--------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              L     L   + N +        + ++ +  ++   + G    A A           
Sbjct: 581 QA-LAHLNTLPAAQWNDDMRDLSKRLTSQTTLAKAEAMRDAGDEIAAMAFLRQQPTDT-- 637

Query: 358 KEIFLLLAQIEQANS 372
             I LLLA    A  
Sbjct: 638 -RIDLLLADWALAQG 651



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 35/134 (26%), Gaps = 6/134 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L + +          A   L                L   +   G+  +A     +  
Sbjct: 609 TTLAKAEAMRDAGDEIAAMAFLRQQPTDTRIDLL----LADWALAQGEYTTALAEYQRIR 664

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240
              P  P      +  ++   +   A   LN+   +     N  R +    +++ N  K 
Sbjct: 665 TREPQNPDAQLGEIDAFIAQGQQDEARQRLNKLPVQAVDTLNGQRRVANAWQAVGNPQKS 724

Query: 241 DMIASYHDAIESLK 254
                    I++ K
Sbjct: 725 -TALFRQLKIDAQK 737


>gi|298705024|emb|CBJ28499.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 827

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 96/285 (33%), Gaps = 13/285 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
               +++L+  +        + A   L E  L  P + +  + ++  E         A+ 
Sbjct: 477 PRAEMLWLMAAKEKWLSNDVDGARTILKEAFLANPDSEQVWLAAVKLE-WENNAFERARI 535

Query: 176 YATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
              KA D +P    W+  A++++ + A E   A+  ++    +   + +   + ++A  L
Sbjct: 536 LLKKACDRAPTALVWMKAALLERELKAPE--AALKLIDTALPSYPTFAK---LYMMAGQL 590

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            + +      +       L+ C  SI     AA+         KA  +LE     NP  E
Sbjct: 591 CSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSE 650

Query: 295 IANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                  +  E   G  K A  L     +E   S V+ ++  L     +Q         +
Sbjct: 651 -GLWLEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQKSKSLEALKR 709

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP--DPLWIS 396
                 +   +A+   A+     K   W   A+   P     W +
Sbjct: 710 CDNDPHVITAVARRFWADRK-YAKARKWFNRAITLDPNMGDAWAA 753



 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 200 LAKEW-SRAITFLNQKKKNAKEWNRNRAILLI-------ARSLENADKGDMIASYHDAIE 251
             + W   A   LN+            A+           R+     K     S    ++
Sbjct: 411 RKRTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQMLK 470

Query: 252 -SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVG 309
            ++  C  + M  + AAK     N    A  IL++ +  N  P+   ++   +  E    
Sbjct: 471 KAVTHCPRAEMLWLMAAKEKWLSNDVDGARTILKEAFLAN--PDSEQVWLAAVKLEWENN 528

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML---AMKIAPRKEIFLLLA- 365
             +RA  L +   +   + ++  K AL    +    A   L   A+   P      ++A 
Sbjct: 529 AFERARILLKKACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAG 588

Query: 366 QIEQANSHNTDKILYWTQSALHAMPD--PLW 394
           Q+     +  ++   + Q  L A P   PLW
Sbjct: 589 QLCSEELNLPERAREYYQRGLRACPGSIPLW 619


>gi|297809787|ref|XP_002872777.1| hypothetical protein ARALYDRAFT_490219 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318614|gb|EFH49036.1| hypothetical protein ARALYDRAFT_490219 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1004

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 95/299 (31%), Gaps = 41/299 (13%)

Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + + + E L+ +L+      P      +     E    GD+ +A+    +A   
Sbjct: 640 AAQLE-KSHGSRESLDALLRKAVTYVPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 697

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--- 240
            P++  +  A  +     KE  RA   L + ++            ++ R L N ++    
Sbjct: 698 IPNSEEIWLAAFKLEFENKEPERARMLLAKARERGGTERVWMKSAIVERELGNVEEERRL 757

Query: 241 --------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                                      +  +       LK C + I   +  A      N
Sbjct: 758 LNEGLKQFPTFFKLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVN 817

Query: 275 KKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332
              KA  IL    K N  P  A ++   + +E      + A  L     +E   S ++ +
Sbjct: 818 GLNKARAILTTARKKN--PGGAELWLAAIRAELRHDNKREAEHLMSKALQECPSSGILWA 875

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +EM    +   K+M AMK   R     +            +K   W + A+   PD
Sbjct: 876 -ADIEMAPRPRRKTKSMDAMKKCDRDPHVTVAVAKLFWQDKKVEKARSWFERAVTLGPD 933


>gi|270262102|ref|ZP_06190374.1| hypothetical protein SOD_b03090 [Serratia odorifera 4Rx13]
 gi|270043978|gb|EFA17070.1| hypothetical protein SOD_b03090 [Serratia odorifera 4Rx13]
          Length = 389

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 31/259 (11%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  AV  L  +    G  + A+         +   IS
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGMYDRAEDMFGQLVGEEDFRIS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W +AI    +  K  K+  R   A      +L+     D+ 
Sbjct: 143 -----ALQQLLVIHQATSDWLKAIDVAEKLVKLGKDKQRIEIAHFYCELALQAMGSDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIAN 297
            +      +          SI   +  ++Q +  KA   L+      K       P +  
Sbjct: 198 KAMSLLKRAASADKQCARVSIMVGRIYMAQAEYAKAVESLQRVLNQDKELVSETLPMLHE 257

Query: 298 IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            Y HL + ++    LKR     E N  +  + +++++I  +    D         ++  P
Sbjct: 258 CYQHLENQQDWAEFLKRC---VEENTGAT-AELMLAEIIEQHEGRDVVQVYINRQLQRHP 313

Query: 357 RKEI-FLLL----AQIEQA 370
              + + L+    A  E  
Sbjct: 314 TMRVFYRLMDYHLADAEDG 332


>gi|262362142|gb|ACY58863.1| hypothetical protein YPD4_1956 [Yersinia pestis D106004]
          Length = 385

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 83/253 (32%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W  AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLIIHQATSDWHNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361
                        R  E N  +  + ++++++  +    D A       ++  P     +
Sbjct: 263 QQPQAWANF--LKRCVEDNTGAA-AELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|332288803|ref|YP_004419655.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179]
 gi|330431699|gb|AEC16758.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179]
          Length = 390

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 89/279 (31%), Gaps = 61/279 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151
             +  A ++H  +     +  E    LL  Q     +        + A +  + + + P 
Sbjct: 91  GEVDRALRIHQNIDNNPNYSYEQ--KLLTRQ--QLAKDFMFVGFLDRAEKLYQKLSEEPD 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                                   YA  AL            +   Y   KEW +AI   
Sbjct: 147 ------------------------YAENAL----------HELANIYQRTKEWDKAIEVG 172

Query: 212 NQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            + +K   +  N   +      +LE+  +  ++AS     ++L +  N + A++  A+  
Sbjct: 173 ERYRKLTQQTENIALSHYYCEFALESDQQQQIMASLT---KALIVSPNCVRATLILAEQY 229

Query: 271 ISQNKKRKAEVILEK------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
             QN   +A   LE+       +     P +   Y HL + + +      ++L++     
Sbjct: 230 AKQNNYEQAIKTLEQIVEQNLAYISEALPPLIEYYHHLPNSHDLELF--LIKLQQQKVN- 286

Query: 325 VESLVIVSKIALEMGSIDQ--AHAKAMLAMKIAPRKEIF 361
             S V+++             A       ++  P   IF
Sbjct: 287 --SAVVIALTDYIEQKSGAEVAKNHLYRQLEKRPTMRIF 323


>gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
          Length = 561

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 74/229 (32%), Gaps = 11/229 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A E    +L+    +  A++       ++G  + A  Y  +AL + P       
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQN 74

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +         +   A    +Q  +   +     A      +     +     +     ++
Sbjct: 75  SRGNILSQHGKLVEATIAYDQAIQLQPD----HATAYNNIANCFFRQKKFDNAKKAYQKA 130

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307
           + L  +   A    A+ LI      +A   L++   ++ H      ++A++Y +L   + 
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYL--GDF 188

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +    +   +  E+ ++        L+     +A      A+ + P
Sbjct: 189 SKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNP 237


>gi|294667607|ref|ZP_06732821.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602602|gb|EFF46039.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 690

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 71/221 (32%), Gaps = 8/221 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A + +  +PD       +        + + A+  ++     A E 
Sbjct: 6   LQALRRNAADDAVALAREWVANAPDHAAAHRWLALALQQQGQPALALDSIDTALTLAPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      S  L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +        L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378
                A       +++ P        +AQ+ Q      D +
Sbjct: 182 EHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDAV 222



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 16/292 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  + S  +       +  ++LL     LA R  + A   L     +   +  A   
Sbjct: 46  GQPALALDSIDTALTLAPEDADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVM 105

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217
               +   GDL+ A+R +  A  ++P+ P     + VV+      +  RA++ L +  + 
Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMR--RGQDDRALSLLTRAAEQ 163

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +     A +L +       K     +       ++L           A+    Q +  
Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLD 219

Query: 278 KAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            A   ++ +    P  ++  +        L +                      +L  + 
Sbjct: 220 DAVAAMQGV-LDQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALL 278

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
                +G++D A      A+  +       L  LA            I  W 
Sbjct: 279 TAWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330


>gi|22125957|ref|NP_669380.1| tetratricopeptide repeat protein [Yersinia pestis KIM 10]
 gi|45441824|ref|NP_993363.1| tetratricopeptide repeat protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108807580|ref|YP_651496.1| tetratricopeptide repeat protein [Yersinia pestis Antiqua]
 gi|108811856|ref|YP_647623.1| tetratricopeptide repeat protein [Yersinia pestis Nepal516]
 gi|145598206|ref|YP_001162282.1| tetratricopeptide repeat protein [Yersinia pestis Pestoides F]
 gi|149365855|ref|ZP_01887890.1| hypothetical protein YPE_1033 [Yersinia pestis CA88-4125]
 gi|162419005|ref|YP_001606679.1| tetratricopeptide repeat protein [Yersinia pestis Angola]
 gi|165927444|ref|ZP_02223276.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938149|ref|ZP_02226708.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166010616|ref|ZP_02231514.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166210731|ref|ZP_02236766.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400789|ref|ZP_02306295.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167420312|ref|ZP_02312065.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424915|ref|ZP_02316668.1| tetratricopeptide repeat protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467727|ref|ZP_02332431.1| tetratricopeptide repeat protein [Yersinia pestis FV-1]
 gi|218929322|ref|YP_002347197.1| tetratricopeptide repeat protein [Yersinia pestis CO92]
 gi|229894911|ref|ZP_04510089.1| conserved protein [Yersinia pestis Pestoides A]
 gi|229897654|ref|ZP_04512810.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898299|ref|ZP_04513446.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229902158|ref|ZP_04517279.1| conserved protein [Yersinia pestis Nepal516]
 gi|270490630|ref|ZP_06207704.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
 gi|294503738|ref|YP_003567800.1| hypothetical protein YPZ3_1628 [Yersinia pestis Z176003]
 gi|21958899|gb|AAM85631.1|AE013809_5 putative heat shock protein [Yersinia pestis KIM 10]
 gi|45436686|gb|AAS62240.1| Predicted N-acetylglucosaminyl transferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108775504|gb|ABG18023.1| hypothetical protein YPN_1694 [Yersinia pestis Nepal516]
 gi|108779493|gb|ABG13551.1| hypothetical protein YPA_1585 [Yersinia pestis Antiqua]
 gi|115347933|emb|CAL20855.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145209902|gb|ABP39309.1| hypothetical protein YPDSF_0909 [Yersinia pestis Pestoides F]
 gi|149292268|gb|EDM42342.1| hypothetical protein YPE_1033 [Yersinia pestis CA88-4125]
 gi|162351820|gb|ABX85768.1| tetratricopeptide repeat protein [Yersinia pestis Angola]
 gi|165913810|gb|EDR32428.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165920710|gb|EDR37958.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165990318|gb|EDR42619.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166207911|gb|EDR52391.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166962007|gb|EDR58028.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049642|gb|EDR61050.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167056102|gb|EDR65880.1| tetratricopeptide repeat protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229681054|gb|EEO77149.1| conserved protein [Yersinia pestis Nepal516]
 gi|229688589|gb|EEO80658.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229693991|gb|EEO84040.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702006|gb|EEO90027.1| conserved protein [Yersinia pestis Pestoides A]
 gi|262365474|gb|ACY62031.1| hypothetical protein YPD8_1346 [Yersinia pestis D182038]
 gi|270339134|gb|EFA49911.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
 gi|294354197|gb|ADE64538.1| hypothetical protein YPZ3_1628 [Yersinia pestis Z176003]
 gi|320014892|gb|ADV98463.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 389

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 83/253 (32%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W  AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLIIHQATSDWHNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361
                        R  E N  +  + ++++++  +    D A       ++  P     +
Sbjct: 263 QQPQAWANF--LKRCVEDNTGAA-AELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|94266075|ref|ZP_01289793.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93453358|gb|EAT03789.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 585

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 68/233 (29%), Gaps = 10/233 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + ++ + A    Q  +A +     L+        + +L            A  +  +  +
Sbjct: 60  HFIQAERAKLAGQLELARQAYRQALRCDPLALPVMRNLAMLLLASEQRQEAIEWLQRMAE 119

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P    +   +   Y  A +  +A     +             +L    + +   +  +
Sbjct: 120 LRPGETEIHSLLANLYAAAGQPDKAAAIYRKILAAEPGNANVTLLLATLYARQERRQDAL 179

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPEIANI 298
           +   +  ++         MA    A+     +    A    E+     W      E A  
Sbjct: 180 VMLENLVLQQ----PEMAMAHFYLARLHREMDDLPAALAAYERALALQWSAAMAREAAET 235

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           Y          +L R  ++   N     +  +++ I L +  +D+A  +    
Sbjct: 236 YEMAGRYEDSLRLYR--QVVAANPADERARGLLANIYLRLERVDEALDELAEL 286


>gi|24215272|ref|NP_712753.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45657285|ref|YP_001371.1| hypothetical protein LIC11408 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24196364|gb|AAN49771.1|AE011424_9 TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45600523|gb|AAS70008.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 369

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 5/158 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y+ A +      ++     FA+Y L        D + A +Y  + L+  PD   +   
Sbjct: 202 KDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHKANQYWERILEFDPDNKLIINR 261

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    E+ +A+   N+     +++       L+ ++      G    +    ++  
Sbjct: 262 YADSLRGMGEFDKALECFNKILAEGEDY-----FALLGKASSLKLIGKKDKAEEIYLDLH 316

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           K         +  +   +   K  +A  +LE   K  P
Sbjct: 317 KKFPMDPRPLLELSDLHVEMGKPTEAIRLLEDFQKKQP 354


>gi|330445638|ref|ZP_08309290.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489829|dbj|GAA03787.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 389

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 48/287 (16%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T     L      +  +     + A    + +L+ P  +  
Sbjct: 83  GEVDRAIRIHQNLIARPNLTIEQRNLALQQLAKDYMVAGFLDRAERIFQQLLEEPEYK-- 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                                        P      + ++  Y   +EW  AI   +Q  
Sbjct: 141 ----------------------------KPAL----QQLLSIYQQTREWEEAIDVASQLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  K   ++  A      ++      +   +     ++L      + ASI  AK LI + 
Sbjct: 169 KLGKTKLKHDIAHYWCELAMIEMGAQNQDKALQCLKKALSTDKQCVRASITMAKILIKEK 228

Query: 275 KKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           + ++A   LE        +     P +   Y  L +E+  G LK   +  E    +   L
Sbjct: 229 EFKQAAKTLERVLEQDAEFIGEALPLLLECYEALHNES--GWLKYLQQCVEAKAGASAEL 286

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLA-QIEQANSH 373
           ++  +IA   G++  A +     ++  P     + L+   +++A   
Sbjct: 287 MLADEIAKNEGAVS-AQSFMTRQLQKNPTMKGFYQLMEYHLDEAEEG 332


>gi|66793439|ref|NP_001019747.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Xenopus (Silurana)
           tropicalis]
 gi|60618530|gb|AAH90599.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Xenopus (Silurana) tropicalis]
          Length = 1035

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 101/300 (33%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 97  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +     AE       ++ P H +  N   +
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPTHADSLNNLAN 325

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383



 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 105/353 (29%), Gaps = 77/353 (21%)

Query: 84  GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           G  A  TGL  +A     A +   A + H     +    N  ++ LL        R    
Sbjct: 6   GSVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64

Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190
           AH     + Q P         L  E+           G L  A  +   AL + PD    
Sbjct: 65  AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243
              +    V A +   A+       +   + +     +  + ++L   ++          
Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175

Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                                   + H   +++ L  N +        + I+     K  
Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228

Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327
            I ++           +P     H  +A +Y    L +  +   +RA+ L        ++
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
              ++    E GS+  A      A+++ P   +    LA I++   +  + + 
Sbjct: 286 YCNLANALKEKGSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 290 ANALKEKGSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499


>gi|29653887|ref|NP_819579.1| TPR domain-containing protein [Coxiella burnetii RSA 493]
 gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331]
 gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493]
 gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 331]
          Length = 561

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 74/229 (32%), Gaps = 11/229 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A E    +L+    +  A++       ++G  + A  Y  +AL + P       
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQN 74

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +         +   A    +Q  +   +     A      +     +     +     ++
Sbjct: 75  SRGNILSQHGKLVEATIAYDQAIQLQPD----HATAYNNIANCFFRQKKFDNAKKAYQKA 130

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307
           + L  +   A    A+ LI      +A   L++   ++ H      ++A++Y +L   + 
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYL--GDF 188

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +    +   +  E+ ++        L+     +A      A+ + P
Sbjct: 189 SKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNP 237


>gi|218783089|ref|YP_002434407.1| hypothetical protein Dalk_5269 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764473|gb|ACL06939.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 816

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 88/264 (33%), Gaps = 13/264 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            N   AR+  S            L+  +   +  AE     A    +  L++   +    
Sbjct: 541 GNPEKARERLSIALALD--PENALIQTVMANVLSAEGDLEEARVHYQKALELEPDQSQIH 598

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+      ++G+++ A+     AL+  P+ P     +         +  A+T  ++    
Sbjct: 599 YAYGNLLSKLGEVDQAEEQHRAALENDPEDPRFHANMANTLSRQGRYGEAMTHYHKAL-- 656

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E     A++     +  AD+G +  +      ++K   +   A       L  Q + +
Sbjct: 657 --ELEPGNAMIHTNMGIALADQGKVDEAASHFKAAMKSQPDFAPAYYNMGYVLAKQGRHQ 714

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTV-----GKLKRALRLEEINKESVESLVIVS 332
           +A     K  ++   P+    Y    +           ++   +  E   ++ + L  + 
Sbjct: 715 EALEYFSKAVEIK--PDYGQAYYEAGNSLAHTGHLNEAVQSYKKALEQEPDNPKILHNLG 772

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
            +  + G ++ A      A+ + P
Sbjct: 773 IVYAQGGELETAVDYFEKALALQP 796



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 100/307 (32%), Gaps = 22/307 (7%)

Query: 98  HNIPLARKMHSYV------SQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            N  +A++M++        + +    +   L  L   Q++L     + A   +   L+  
Sbjct: 432 GNAYMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSL--GLLDEATANVREALKTD 489

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A Y+L     +   L+ A  Y   A+ + PD P     +           +A   
Sbjct: 490 PNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMAQCNLGYLLYKMGNPEKARER 549

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L+       E     A++    +   + +GD+  +     ++L+L  +           L
Sbjct: 550 LSIALALDPE----NALIQTVMANVLSAEGDLEEARVHYQKALELEPDQSQIHYAYGNLL 605

Query: 271 ISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
               +  +AE       + +P     H  +AN  +          +    +  E+   + 
Sbjct: 606 SKLGEVDQAEEQHRAALENDPEDPRFHANMANTLS--RQGRYGEAMTHYHKALELEPGNA 663

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQS 384
                +     + G +D+A +    AMK  P     +  +  +      + +  L +   
Sbjct: 664 MIHTNMGIALADQGKVDEAASHFKAAMKSQPDFAPAYYNMGYVLAKQGRHQE-ALEYFSK 722

Query: 385 ALHAMPD 391
           A+   PD
Sbjct: 723 AVEIKPD 729



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 63/227 (27%), Gaps = 37/227 (16%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------- 216
           ++G+   A+   + AL + P+   +   +        +   A     +  +         
Sbjct: 539 KMGNPEKARERLSIALALDPENALIQTVMANVLSAEGDLEEARVHYQKALELEPDQSQIH 598

Query: 217 -------------NAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLKL 255
                        +  E     A+             +   + +G    +     ++L+L
Sbjct: 599 YAYGNLLSKLGEVDQAEEQHRAALENDPEDPRFHANMANTLSRQGRYGEAMTHYHKALEL 658

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGK 310
              + M       +L  Q K  +A    +   K    P+ A       Y           
Sbjct: 659 EPGNAMIHTNMGIALADQGKVDEAASHFKAAMKSQ--PDFAPAYYNMGYVLAKQGRHQEA 716

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           L+   +  EI  +  ++           G +++A      A++  P 
Sbjct: 717 LEYFSKAVEIKPDYGQAYYEAGNSLAHTGHLNEAVQSYKKALEQEPD 763



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 15/188 (7%)

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENA 237
           +AL   PD+P     +   Y+  + ++ A+T   +  + +  + +    +     SL   
Sbjct: 416 RALQYVPDSPRPWYNLGNAYMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSLGLL 475

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           D+     +  +  E+LK   NS +A      ++   N+  +A +  +    + P   +A 
Sbjct: 476 DE-----ATANVREALKTDPNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMAQ 530

Query: 298 ------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                 +Y     E    +L  AL L   + E+     +++ +    G +++A      A
Sbjct: 531 CNLGYLLYKMGNPEKARERLSIALAL---DPENALIQTVMANVLSAEGDLEEARVHYQKA 587

Query: 352 MKIAPRKE 359
           +++ P + 
Sbjct: 588 LELEPDQS 595


>gi|149176413|ref|ZP_01855027.1| putative methyltransferase [Planctomyces maris DSM 8797]
 gi|148844765|gb|EDL59114.1| putative methyltransferase [Planctomyces maris DSM 8797]
          Length = 1398

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 15/230 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y  A +  E  +++       +Y+L       G+   A     KAL++ P  P     
Sbjct: 86  GKYQDAIQNYERAIELEPRNAAFIYNLAITLANSGEKQRAIDAYRKALELKPGYPDALIN 145

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +    +   E   AI    Q  + A + +  +  L  A +    D     A+Y  A++  
Sbjct: 146 LGNLLLETDEVEEAIEICKQVVRLAPDLHTAQFNLANALAKA-EDTESADAAYQRALQ-- 202

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI-------WKVNPHPEIANIYTHLLSEN 306
            L  + +      A  L ++ K   A  IL K        W++     +  +YT     +
Sbjct: 203 -LAPDHLDTMKNYAVFLSAKEKYETAISILRKAAILEPGNWEILN--NLGIVYTRQEDFD 259

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           T   +K        + ++ E    + K   E      A       +K  P
Sbjct: 260 TA--IKCFHDALNHSPDNCEIRFHLGKALEESKQTTDAMLTYRAVLKKQP 307



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 71/198 (35%), Gaps = 9/198 (4%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
               +   ++    + L   +A     +  A++  + + Q  +T   +++ +     +  
Sbjct: 300 RAVLKKQPNHPGAAFHLGSMLAAL-GDFEQAYDIFQRLYQSDSTNTASLFGMGCVRHQQR 358

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            + SA  Y    + + PD       +++ Y        A   ++Q      E +   A L
Sbjct: 359 KIGSAVGYFETLVSLEPDHLQSRLKLIELYSTQLRVKEATHHIDQ----GLEAHPECAAL 414

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              +      K     +    + + KL D  +      A    S    ++A+  LEK ++
Sbjct: 415 WNYKGHIQNQKKQFKKALKSFLRARKLDDGYLPVYCNLATVYQSMGMFQEAKQALEKAYE 474

Query: 289 VNPHPE----IANIYTHL 302
           + P PE    +A+++  +
Sbjct: 475 LIPQPEYRLALASLFPPI 492



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 82/292 (28%), Gaps = 11/292 (3%)

Query: 70  AMLFHMLHKRNYDKGY-KALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             +           GY  AL   G + +    +  A ++   V +     +     L   
Sbjct: 124 RAIDAYRKALELKPGYPDALINLGNLLLETDEVEEAIEICKQVVRLAPDLHTAQFNL--A 181

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                      A    +  LQ+       + +            +A     KA  + P  
Sbjct: 182 NALAKAEDTESADAAYQRALQLAPDHLDTMKNYAVFLSAKEKYETAISILRKAAILEPGN 241

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             +   +   Y   +++  AI   +    ++ +    R    + ++LE  +      +  
Sbjct: 242 WEILNNLGIVYTRQEDFDTAIKCFHDALNHSPDNCEIR--FHLGKALE--ESKQTTDAML 297

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLS 304
                LK   N   A+      L +     +A  I +++++    N              
Sbjct: 298 TYRAVLKKQPNHPGAAFHLGSMLAALGDFEQAYDIFQRLYQSDSTNTASLFGMGCVRHQQ 357

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 +     L  +  + ++S + + ++      + +A       ++  P
Sbjct: 358 RKIGSAVGYFETLVSLEPDHLQSRLKLIELYSTQLRVKEATHHIDQGLEAHP 409


>gi|94987039|ref|YP_594972.1| TPR repeat-containing protein [Lawsonia intracellularis PHE/MN1-00]
 gi|94731288|emb|CAJ54651.1| FOG: TPR repeat [Lawsonia intracellularis PHE/MN1-00]
          Length = 803

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 14/209 (6%)

Query: 86  KALYT---GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
            AL     G+   +  +   A+K             E ++                A + 
Sbjct: 602 NALARNSLGVCIASLGHYNEAQKHFKEA--LQLLPTEPMISYNLGMTYQNLGDITSATQY 659

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
               L +  T  +A   L   +    +   A +Y  +AL I+         +        
Sbjct: 660 FHNCLTLCPTHLYAAIRLGALAESTNNTQEAIKYYNQALSINKKHALPYRHLAMLAFKEG 719

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIM 261
           +  +A  +L+Q       +N +    L+  +    D G D   +   + + +    +   
Sbjct: 720 KKEKAREYLHQAL----LYNPHDTTTLMLMAKMYLDSGEDPEIAETLSRQCVAQRPDIKS 775

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVN 290
             I  A++L +Q KK++A       W   
Sbjct: 776 NWIEFARALEAQGKKKEANK----AWLKA 800



 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 15/197 (7%)

Query: 201 AKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             +   AI          KN      +  + + +        G    +     E+L+L  
Sbjct: 582 RGDLFSAIEEYKLALLADKNNALARNSLGVCIASL-------GHYNEAQKHFKEALQLLP 634

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT---VGKLKRA 314
              M S     +  +      A         + P    A I    L+E+T      +K  
Sbjct: 635 TEPMISYNLGMTYQNLGDITSATQYFHNCLTLCPTHLYAAIRLGALAESTNNTQEAIKYY 694

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH 373
            +   INK+       ++ +A + G  ++A      A+   P      +L+A++   +  
Sbjct: 695 NQALSINKKHALPYRHLAMLAFKEGKKEKAREYLHQALLYNPHDTTTLMLMAKMYLDSGE 754

Query: 374 NTDKILYWTQSALHAMP 390
           + +           A  
Sbjct: 755 DPEIAET-LSRQCVAQR 770


>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Trigonal Crystal Form)
 gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Orthorombic Crystal Form)
          Length = 136

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 4/129 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               +  Y+ A E  +  L++      A Y+L     + GD + A  Y  KAL++ P + 
Sbjct: 10  AYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 69

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   Y    ++  AI +  +      E +   A            +GD   +   
Sbjct: 70  EAWYNLGNAYYKQGDYDEAIEYYQKAL----ELDPRSAEAWYNLGNAYYKQGDYDEAIEY 125

Query: 249 AIESLKLCD 257
             ++L+L  
Sbjct: 126 YQKALELDP 134



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 7/125 (5%)

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +GD   +     ++L+L   S  A      +   Q    +A    +K  +++  P  A  
Sbjct: 14  QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PRSAEA 71

Query: 299 YTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + +L        +    ++   +  E++  S E+   +     + G  D+A      A++
Sbjct: 72  WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 131

Query: 354 IAPRK 358
           + PR 
Sbjct: 132 LDPRS 136



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 2/89 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A + +    +      E    L        +  Y+ A E  +  L++      A 
Sbjct: 49  GDYDEAIEYYQKALELDPRSAEAWYNL--GNAYYKQGDYDEAIEYYQKALELDPRSAEAW 106

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPD 186
           Y+L     + GD + A  Y  KAL++ P 
Sbjct: 107 YNLGNAYYKQGDYDEAIEYYQKALELDPR 135


>gi|149713893|ref|XP_001503021.1| PREDICTED: similar to Transmembrane and TPR repeat-containing
           protein 1 [Equus caballus]
          Length = 774

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 86/272 (31%), Gaps = 23/272 (8%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             R    A    +  LQ+      A+++L            A      ++   P+     
Sbjct: 418 LTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQDKKEEAIILLKDSIKYGPEFADAY 477

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        KN  + +     L     +   D G    +     +
Sbjct: 478 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYGVFLVDTGSPEKAVAHYQQ 533

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTH-LL 303
           ++KL  +  +A +   +   S           ++A  +  K   ++P   +  +Y +   
Sbjct: 534 AIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKAEILSP---LGALYYNTGR 590

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRKEIFL 362
            E  +   + A     +     E  + ++++   MG   +A      +  + A   E + 
Sbjct: 591 YEEALQIYREA---AALQPSQRELRLALAQVLAVMGQTKEAEKMTIHIVSEEAGCLECYR 647

Query: 363 LLAQI-EQANSHNTDKILYWTQSALH-AMPDP 392
           LL+ I  +   H+  K L     AL     DP
Sbjct: 648 LLSAIYSKQELHD--KALDAIDKALRLKPKDP 677



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 96/283 (33%), Gaps = 37/283 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +   +   A   +    +    H+  +V L   ++  +    ++A E  +  LQ+ 
Sbjct: 515 GVFLVDTGSPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGDNSVAEEWYKRALQVA 572

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT- 209
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 573 RKAEI-LSPLGALYYNTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKM 631

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            ++   + A      R +  I    E  DK     +     ++L+L        I  ++ 
Sbjct: 632 TIHIVSEEAGCLECYRLLSAIYSKQELHDK-----ALDAIDKALRLKPK-DPKVI--SEL 683

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
             ++  + + + +L+K ++                              E+N +  ++ +
Sbjct: 684 FFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQAWM 719

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
            +  I    G+   A A    A+++ P  ++    LA++++  
Sbjct: 720 NMGGIQHIKGNYVSARAYYERALQLVPDSKLLQENLAKLDRLE 762


>gi|124022007|ref|YP_001016314.1| hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962293|gb|ABM77049.1| Hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
           9303]
          Length = 594

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 90/273 (32%), Gaps = 36/273 (13%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               A++++   S+      E + +         +     A       ++          
Sbjct: 17  EKKRAKRLNKSESRGEALQKEAMNF-------HMQGDIENAEYLYRQAIE---------I 60

Query: 159 SLYFESC--------RIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
               E+         +  D    A     KA++  PD P     +   +       +A+ 
Sbjct: 61  GFLHEAIFSNLGVICKNSDRQEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALA 120

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  +   +     A + +       + G++  +    ++SL+L  ++  A +   + 
Sbjct: 121 ATLKSLELKPD--NPDAHINLGG--IYKELGNLDQALTSTLKSLELKPDNPTAYMNLGRI 176

Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
                   +A     K  ++ P     H  +  IY  L + +          L ++  ++
Sbjct: 177 YQDLGNLDQALASTLKSLELKPDNPTAHMNLGIIYRDLRNLD-QALASSLQSL-QLKPDN 234

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             + + +  I  ++G++DQA A  + ++++ P 
Sbjct: 235 HTAYINLGVIYQDLGNLDQALASTLKSLELKPD 267


>gi|261253449|ref|ZP_05946022.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891]
 gi|260936840|gb|EEX92829.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891]
          Length = 389

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 86/289 (29%), Gaps = 55/289 (19%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + +      +  +A    + A +  E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGFLDRAEKIFEQLVDEPDHREA 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+  L     +  + + A  YA                                      
Sbjct: 143 ALQQLVAIYQQTREWSKAIHYA------------------------------------SL 166

Query: 216 KNAKEWNRNRA---ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  R R          +++   +G+   +  +  ++L      + ASI   K  + 
Sbjct: 167 LVKMGRKRMRTSIGHFWCELAMQEQAEGNHTQARQNFKKALTEDPRCVRASIALGKLYLE 226

Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
               ++    LE +      +     P +A  Y HL  E+ +    R   +      S E
Sbjct: 227 DEDYKRTIAYLEAVLEQDSDFVSEVLPTLAECYHHLGQEDELLNFLR-QCIVGKAGVSAE 285

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370
             ++++++  +      A       +   P     + L+    A+ E+ 
Sbjct: 286 --LMLAQMVAKHDGPGAAQELLTRQLVKNPTMKGFYRLMDYHLAEAEEG 332


>gi|325919942|ref|ZP_08181927.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas gardneri
           ATCC 19865]
 gi|325549558|gb|EGD20427.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas gardneri
           ATCC 19865]
          Length = 421

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 110/360 (30%), Gaps = 29/360 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   YR +    L IL   L    L++
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLILVIALLVLWLVW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K    KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVTASEDDDVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYF----ESCRIGDLNS 172
            L     V++A A      A    + + +   T          L      E+    D  +
Sbjct: 120 ALAT--AVRVADARGDDASATALAQQLAERDPTAHALLQGERHLARQRPVEAINALDSAN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +       T+A+ Q     + + +      Q       +N   A L    
Sbjct: 178 AQPLPARGLLLR------TQALAQIGRADEAYGQLGALRQQAVLAPDAYNALEATLAEQT 231

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            L+  D   +   +    + L+     + A    A  L   +    A   LE+       
Sbjct: 232 LLQAGDANALAERWEALPKPLRTYPAVVGAYAQRAAILHWDD---AAVHSLEQALDTQWD 288

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +  +Y  L  E    +   A R      +S   L+ ++++A       QA      A+
Sbjct: 289 ESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTMARLARHQQQWSQAEEFLHRAV 348


>gi|73670643|ref|YP_306658.1| O-GlcNAc transferase, p110 subunit [Methanosarcina barkeri str.
           Fusaro]
 gi|72397805|gb|AAZ72078.1| O-GlcNAc transferase, p110 subunit [Methanosarcina barkeri str.
           Fusaro]
          Length = 349

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 82/240 (34%), Gaps = 11/240 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             +   + A       +A  + + +LQ       A+        + G   +A+    KAL
Sbjct: 80  TLMEAGKTAFLLGLDELAVREFKEILQQNPQNVEALSGYGTVLAKEGKNAAARIQYEKAL 139

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           + +P                K+   A    ++        +R          +  + +G 
Sbjct: 140 EFNPYHVDTLCNYGYLLYRLKKLDEAEEVYSRALI----LDRENVSAHCGYGILLSKRGQ 195

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV---ILEKIWKVNPHPEIANI 298
              + +    +L+L    + ++   A+ L  + +   AE    +  K    +P P I   
Sbjct: 196 KNEASYHYTRALELDPGHVESNFRYARLLEEKGEPLDAEKHYIVALKAESADPRPHI--F 253

Query: 299 YTHLLSENTVGKLKR--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           Y  LL+E+      R       ++N E VE+    +++    G   +A  +   A+++ P
Sbjct: 254 YARLLAEHGFIHGARVHFRCALKLNPEDVEAHCEYARLLARFGHRHEAEVQYKKALELDP 313


>gi|304313076|ref|YP_003812674.1| hypothetical protein HDN1F_34590 [gamma proteobacterium HdN1]
 gi|301798809|emb|CBL47042.1| Hypothetical protein HDN1F_34590 [gamma proteobacterium HdN1]
          Length = 881

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 21/257 (8%)

Query: 133 ERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                 A +KL  + Q       A R   V        R GDL  A++Y ++ +D    +
Sbjct: 303 AGNLQEAEQKLMRLYQQYNEPDAAGRLLGVI-----RMREGDLEGAEQYFSQHIDPETAS 357

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P     + +  +   + S A+  L      + E     A LL    L     G       
Sbjct: 358 PEALRVLAENQLRLNKVSEAMHLLEANLSRSPE----DADLLGVYGLAALANGQSEKGLE 413

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHL 302
              ++LK+  +        A+  + +   + A   LEK  K  P       ++  IY   
Sbjct: 414 ALQKALKIAPSKTGLRATLAQYYLQKGDAKSAIDQLEKAIKQAPSELALRGQLVQIYLRE 473

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            + + V    +A ++E+    + + L     I  ++G++ QA      A+ + P     L
Sbjct: 474 KNLDAVK--NQAAQIEKDFATNADGLAAAGSIYTQLGAVKQAKPALEKALSLEPTNPNAL 531

Query: 363 LLAQIEQANSHNTDKIL 379
               I +    +  K  
Sbjct: 532 TAMVILELKGGDLKKAR 548



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 28/273 (10%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A   LE  L +  T   A+ ++     + GDL  A+ YA   ++  P++      +V 
Sbjct: 511 KQAKPALEKALSLEPTNPNALTAMVILELKGGDLKKARSYAETIINTDPNSLRAFRLLVN 570

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHDAIESLKL 255
            +         +    ++ ++  +  R  A    A   +    KGD+  +     E+L  
Sbjct: 571 IHARE----NTLDAFVKQLQHISD-ERINAWGADATLSDYFRSKGDLTQALKHIKEALAR 625

Query: 256 C-----DNSIMASICAA---KSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLS 304
                      A+   A   K+ + Q     A   L +  +    +         T + S
Sbjct: 626 SGFQGYPKLA-ATQLYALITKAQLRQGDMEAARKSLMEGLQNDGNSLELLNLLALTEIES 684

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
                  K   +++  +  S    ++ + + +  G  D A           P   + + L
Sbjct: 685 GKYAEAQKIVTQIQSAHPNSQIPDLLRADLLIAQGDKDAARNALQKLWSANPTDGVAIRL 744

Query: 365 AQIEQANSHNT----------DKILYWTQSALH 387
             + +  + +             +  W +  L 
Sbjct: 745 GGLLETQAQDDFSTEWTTKLPSSVEAWLRLGLR 777



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 13/198 (6%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           I +     A+K+ + +   H   N  +  LL   + +A+   + A   L+ +     T  
Sbjct: 682 IESGKYAEAQKIVTQIQSAH--PNSQIPDLLRADLLIAQGDKDAARNALQKLWSANPTDG 739

Query: 155 FAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
            A+      E+    D ++      +     P +      +  +     + + A     +
Sbjct: 740 VAIRLGGLLETQAQDDFST------EWTTKLPSSVEAWLRLGLRKQAQNDQAAA----ER 789

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 E     A  L   +    +KGD+ ++   A  ++    N           L+  
Sbjct: 790 AYSKVIELRPTEARALNNLAWIRCEKGDLKSAEELAERAVASSPNDAAVLDTYGWILLKA 849

Query: 274 NKKRKAEVILEKIWKVNP 291
            KK  A+ +L+K  ++ P
Sbjct: 850 GKKADAQKMLKKAHELAP 867



 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 10/300 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREF 155
             +  A +  +   Q  +   + L+ L   QIA    Q + A E  E +   + P   + 
Sbjct: 121 GKVKTAEEHLAKPPQNLSATQQELIALYRTQIAAQNGQISQASEGFEKLKKSKNPEIHKQ 180

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A       + R G  +  ++    AL  +P+              A    +A   L+   
Sbjct: 181 ATLGRIVLALRSGAHDEVEKLLAAALQENPEFTEALIIKASIASEADNLDQAEELLSHAL 240

Query: 216 KNAKEWN---RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--L 270
                 +     RA +L   +     +G    +             +  A    A+S  L
Sbjct: 241 MTLPATDMITEIRANVLTGLANVLTRQGHTAEALIYTRMLADARPGADNAKEQFAESLEL 300

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVES 327
           +     ++AE  L ++++    P+ A        +   +  G  +   +  +    S E+
Sbjct: 301 LKAGNLQEAEQKLMRLYQQYNEPDAAGRLLGVIRMREGDLEGAEQYFSQHIDPETASPEA 360

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           L ++++  L +  + +A       +  +P     L +  +    +  ++K L   Q AL 
Sbjct: 361 LRVLAENQLRLNKVSEAMHLLEANLSRSPEDADLLGVYGLAALANGQSEKGLEALQKALK 420


>gi|116629550|ref|YP_814722.1| TPR repeat-containing protein [Lactobacillus gasseri ATCC 33323]
 gi|116095132|gb|ABJ60284.1| TPR repeat protein [Lactobacillus gasseri ATCC 33323]
          Length = 433

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 10/253 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A++
Sbjct: 76  FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 135

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  ++P+   +   + +   L+ ++  A+    +  K  K +     ++L  R   
Sbjct: 136 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGE---VVLSQRIAA 192

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              K        + I+S +    SI A   A   ++S    + A   L+++ +  P    
Sbjct: 193 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYLDQVIETQPDYVN 252

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A      
Sbjct: 253 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 310

Query: 351 AMKIAPRKEIFLL 363
            ++IAP      L
Sbjct: 311 GLEIAPDNSDLRL 323



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             I  AR+    +        E  +     ++      Y  A      + +   T     
Sbjct: 128 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 180

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211
           +     S RI    +      +A +            +A+ +     + A +   AI +L
Sbjct: 181 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYL 240

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +Q  +   ++     +L  A + E+ ++ +++ +    +   +L +         AK+  
Sbjct: 241 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 296

Query: 272 SQNKKRKAEVILEKIWKVNP 291
           + N+  +AE +L+K  ++ P
Sbjct: 297 NLNQLDEAERLLKKGLEIAP 316


>gi|20092070|ref|NP_618145.1| O-GlcNAc transferase, p110 subunit [Methanosarcina acetivorans C2A]
 gi|19917285|gb|AAM06625.1| O-GlcNAc transferase, p110 subunit [Methanosarcina acetivorans C2A]
          Length = 352

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 83/236 (35%), Gaps = 17/236 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            A      N+A  + E +L+           Y       R+G L +A+    +AL+I P 
Sbjct: 89  TASLLGLGNLAAREFEEVLEDNPENIEALCGYGAMLA--RLGKLEAARAQYERALEIHPY 146

Query: 187 APWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                + +          ++   A     +  K A   +           +    +G M 
Sbjct: 147 HI---DTLCHYGCLLYRLRDTDGA----EEAYKKALLLDPRHVGAHCGYGILLYKRGQMN 199

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302
            + +    +L+L    + ++   A+ L+ + +  +AE       K +P + ++   Y  L
Sbjct: 200 DANYHFSRALELDPGHVESNFHYARLLVEKGEPLEAETYYIVALKADPENSKLHLYYARL 259

Query: 303 LSENTVGKLKRALRLEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           L+E+ +    R      +      VE+    + +    G   +A  +   A+++ P
Sbjct: 260 LAEHGIVHGARVHYRYALKIDPGDVEAHCEYAGLLARFGHRHEAEVQYKKALELDP 315


>gi|254251707|ref|ZP_04945025.1| hypothetical protein BDAG_00903 [Burkholderia dolosa AUO158]
 gi|124894316|gb|EAY68196.1| hypothetical protein BDAG_00903 [Burkholderia dolosa AUO158]
          Length = 395

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/379 (13%), Positives = 115/379 (30%), Gaps = 34/379 (8%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             V I +       S  + +  +         L  + R     P  +     +   +K  
Sbjct: 28  GQVLIVYPPYRVDVSLNLFVIAIVVLFIVVYALLRIVRNIWRMPQRVAAYRARSRNEKAQ 87

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
            +L   + ++ A     A K                      Q A +      AH   E 
Sbjct: 88  ASLRDAIANLYAGRFSRAEKAARDALAVDAN-----------QGAASLVAATAAHRMHEY 136

Query: 146 MLQIPATREFAVYS-----LYFESCRIGDLNSAQRYATKALDIS--PDAPWVTEAVVQQY 198
             +     +          L   +    D   A        ++          +  ++  
Sbjct: 137 ARRDDWLSKVDAPGWQDARLLATADMRADARDADGALAALAEMQAGGKRIHAQQVALRAQ 196

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              K W+  +  L +  +  +  +   A+ L  ++ EN  +       HDA   L++  +
Sbjct: 197 QQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLR----ERRHDADALLEVWQS 251

Query: 259 SIMA-------SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
              A       +  AA+ L+   ++ +A  I+E     N    +   Y      + +  +
Sbjct: 252 LSPAERQSPRLADLAAELLVPLERRTEARRIVEDALAHNWDARLLRRYPDTAGADALPLI 311

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQI 367
           ++A   +  + E  + L  + ++  +     +A +    A+K+A            LA++
Sbjct: 312 QKAEGWKNDHPEDADLLFALGRLCQQQQLWGKAQSFLEAALKLADNDALKVRTHRALARL 371

Query: 368 EQANSHNTDKILYWTQSAL 386
            +          ++ +SAL
Sbjct: 372 FEHLGETDKAAKHYRESAL 390


>gi|14626032|emb|CAC44018.1| BcsC protein [Salmonella typhimurium]
          Length = 1053

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 163 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 222

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 223 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 282

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 283 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 342

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 343 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 402

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 403 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 462

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 463 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 507


>gi|332029693|gb|EGI69572.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Acromyrmex echinatior]
          Length = 1087

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 104/306 (33%), Gaps = 31/306 (10%)

Query: 67  SCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNE 119
             P  L +  H          GY  L   L++  A ++  A + +    Q          
Sbjct: 146 QLPEALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRS 203

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRY 176
            L  LL+        + + A       L+   TR     A  +L       G++  A  +
Sbjct: 204 DLGNLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHH 255

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             KA+ + P+       +      A+ + RA+    +    +     N A++    +   
Sbjct: 256 FEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 311

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
            ++G +  +      +++L  N   A    A +L  + +  +AE       ++ P H + 
Sbjct: 312 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADS 371

Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            N   ++  E        +L     LE    E   +   ++ +  + G +++A      A
Sbjct: 372 LNNLANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEA 429

Query: 352 MKIAPR 357
           ++I P 
Sbjct: 430 IRIQPT 435



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 349 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 405

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 406 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 465

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 466 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 515



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 284 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 343

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +         A  L   +    ++G +  +    +++L++ 
Sbjct: 344 ALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKREQGYIEEATRLYLKALEVF 399

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 400 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 457

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 458 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 503


>gi|193216010|ref|YP_001997209.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089487|gb|ACF14762.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 595

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 62/177 (35%), Gaps = 11/177 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              + +   I  L    K   +     A       +   + G    +     ++++    
Sbjct: 422 AKNERFQNIIEPLEHAVKLRPDL----ASAHFGLGMAYLETGLFGKAIEAFNQAVRFNPE 477

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313
              A        +    K +A+  LE+  K+ P     H ++ +++     E  +  +K 
Sbjct: 478 FAQAFAGLGSVYMKLGYKGEAKKALEEAIKLKPEFVDAHLQLGSLFID-EGEYALA-IKS 535

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
              +  +N ++ ++  ++ ++ ++      A  +  +  +++P     LL A  ++ 
Sbjct: 536 FNNITVLNPQNAQAHYLLGQLYIQTNDRAAAMKQLDILDQLSPYLANKLLYALKKRG 592



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 79/258 (30%), Gaps = 48/258 (18%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +A+     A    E  +++      A   L     +      A  YA KA+   PD  
Sbjct: 109 AYVAQGNDQKAIAAYEQAIRLNPENVNAYDGLSLVYMKTWQYEKAALYAEKAIQYQPDLT 168

Query: 189 WVTEAVVQQYVLAKEWSRAIT-------FLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                +       +++  A          L +  ++  +    R  L     +     GD
Sbjct: 169 SAQIRLSMAQFQLRQFQEAFQSMNIAQNLLKETLRHHPDSTDARKAL----GMAYLISGD 224

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSL--------------------ISQNKKRKAEV 281
             ++    I  LK  D     S+ AA+                      + +   +KA  
Sbjct: 225 WNSALSQYI-VLKDQD-----SVLAAELYQEILSQKAEQELQLEFFESMLHKRDVKKAGR 278

Query: 282 ILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             E  ++      + + Y      E  +   K A    EI   +V++L  +    L +  
Sbjct: 279 -FEANFQ------LGSAYLRKQEYEKAIEFYKAA---LEIKPNTVDALNALGVCYLNLER 328

Query: 341 IDQAHAKAMLAMKIAPRK 358
            ++A +   LA+   P K
Sbjct: 329 YNEAISVLKLAIDYDPSK 346


>gi|47223130|emb|CAG11265.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 913

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +           D+ +A+     A  
Sbjct: 551 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAEDVPAARSILALAFQ 608

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 609 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAQE 668

Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++ +                 +   +     + LK C +S+   +  +      
Sbjct: 669 LCTEALKHYEDFPKLWMMRGQIEDQCENTDKAREAYSQGLKKCPHSVALWLLMSHLEERV 728

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP  PE+      L  E   G    A  L     +E   S ++ 
Sbjct: 729 GQLTRARAILEKARLKNPQSPELWLESVRL--EFRAGLKNIASTLMAKALQECPNSGILW 786

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +   P
Sbjct: 787 AE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEP 844

Query: 391 D 391
           D
Sbjct: 845 D 845


>gi|51596473|ref|YP_070664.1| tetratricopeptide repeat protein [Yersinia pseudotuberculosis IP
           32953]
 gi|153948939|ref|YP_001400890.1| tetratricopeptide repeat protein [Yersinia pseudotuberculosis IP
           31758]
 gi|170024261|ref|YP_001720766.1| tetratricopeptide repeat-containing protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186895523|ref|YP_001872635.1| tetratricopeptide repeat-containing protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51589755|emb|CAH21385.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|152960434|gb|ABS47895.1| tetratricopeptide repeat protein [Yersinia pseudotuberculosis IP
           31758]
 gi|169750795|gb|ACA68313.1| Tetratricopeptide TPR_2 repeat protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186698549|gb|ACC89178.1| Tetratricopeptide TPR_2 repeat protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 389

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 83/253 (32%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    + ++       
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W  AI    +  K  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLIIHQATSDWHNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302
             ++          SI   +  +++ +  K    LE++ +          P ++  Y HL
Sbjct: 203 LKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361
                        R  E N  +  + ++++++  +    D A       ++  P     +
Sbjct: 263 QQPQAWANF--LKRCVEDNTGAA-AELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332


>gi|329903550|ref|ZP_08273545.1| porphyrin biosynthesis protein [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548288|gb|EGF32981.1| porphyrin biosynthesis protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 391

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 105/338 (31%), Gaps = 8/338 (2%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
            P +V   +       S    L +L    +   LL          P+ +     ++   +
Sbjct: 6   NPGNVVFFYPPYRIDLSLNFFLLLLAVLFWLCFLLINALSITQKMPSRVAAYRREKRERE 65

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G +AL   L ++       A K  +      +  N  L  L+  + A   +Q     + L
Sbjct: 66  GNRALRDSLKALFEGRFGHAEKAATRAG--VSPDNTGLAALIGARAAHRMQQTARRDDWL 123

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             + +    R   + +             A     +          V    ++    A+ 
Sbjct: 124 NQVTEDSGLRTARLMTALELLVDDHQPERALAAVDELNASGTRHIHVLRLALKASHQARH 183

Query: 204 WSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261
           WS  +  +    KN        R +  +A     +D+ +   S       + + D +   
Sbjct: 184 WSEVLRLVRTLDKNNAMHPAASRRLRELAYDALLSDRSNDAESIRRVWAGVPIADRTTPL 243

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEI 320
            ++ AA++  S+    +A  I+E+   V     +   Y  +  +E +   L +    E  
Sbjct: 244 VAVRAAEAFGSRGLGDEARSIVERALAVEWDDRLIKAYRGVAAAEGSAALLAQIEHCEAW 303

Query: 321 ---NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                   E  + ++ + L+     +A      A+  A
Sbjct: 304 LMQRPTDPELALTLATLCLKQKLWGKAQRHLEHALSDA 341


>gi|323698623|ref|ZP_08110535.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio sp. ND132]
 gi|323458555|gb|EGB14420.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio
           desulfuricans ND132]
          Length = 884

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 7/227 (3%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +  Y+ A    + +L        A   L       G L+ A++   K    +P    +  
Sbjct: 37  DGNYSGAIVIYKTILDEHPNELKARLGLAKSYLATGKLDQARKNFEKYQLQNPYDKELGY 96

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + +   L++   +A+ +     K+  E       LL    L   + G+ + +     ++
Sbjct: 97  DLARLERLSQNKPKALEYAAAYCKDYPE--SVEGALLFGHLL--LEGGNDVQAEEWFSKA 152

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVG 309
           L+L   +  A I  A+   S+ +K  A+  + ++   +P    A  +     L  +N   
Sbjct: 153 LQLAPENTEARIGLAQVYKSRGRKDAADKAIAEVLAKDPTNREALYFKAGRELEDKNKKA 212

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +    + +       +  I ++  LE    D A   A     +AP
Sbjct: 213 YRQTFTAISDAYPHDAYAKYIKAQAMLEEKKFDTAAQLAKELRSMAP 259



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 122/303 (40%), Gaps = 27/303 (8%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT----REF 155
             A +           H+      ++ Q  L E++++ A +  + +    P      +  
Sbjct: 210 KKAYRQTFTAISDAYPHD-AYAKYIKAQAMLEEKKFDTAAQLAKELRSMAPKMPYADKTV 268

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQK 214
            + S+Y +     +   A     KA+ I PDA   +   +   Y    +   AI+ L   
Sbjct: 269 GL-SMYLQK----NYQEAINAYHKAISIRPDAD--SYFFLGLSYYAVGDLETAISHLRVA 321

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
              A ++ + R ++    S+    +  +  S  +A + L+   +++ A +  A +L  + 
Sbjct: 322 ADRADDYLKAREMI----SMILLQQHRVDESMAEARKVLEKDADNVAARMTLADALTMKG 377

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-TVGKLKRALR-LEEI---NKESVESLV 329
           +  +A    E + K    P+ +  Y  + + N  +G +K+A   L      + +S+  ++
Sbjct: 378 ETEEAIEQYEAVTKNR--PDDSATYLKMGALNYAMGNMKQAETDLARAVTASPDSIRPMI 435

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSALHA 388
           I+S   ++ G  D A A     +  +    + + LL ++E ++ +N DK   +   A  +
Sbjct: 436 ILSAFYIKNGEKDMARATLEGGLNGSKTDSVLYFLLGRVELSD-NNVDKAKEYLTKAKES 494

Query: 389 MPD 391
            PD
Sbjct: 495 NPD 497



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 76/236 (32%), Gaps = 39/236 (16%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  Q+ L+ ++Y    +  + + +   +    +          GD + A   A + ++  
Sbjct: 604 LRAQVLLSMKRYEDVLQLCDELEEHSRSAALGLR--TRTYMLKGDFDKAVGSAKQIIEFY 661

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---------------NAKEWNRNRAILL 229
           PD P     +   Y  A + +  +  L + +K                       +A+  
Sbjct: 662 PDQPLGYLTLADIYGGAGDKANQLATLEEGQKLCDSNSSILVALGNVYLASGETKKALSY 721

Query: 230 IARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           I  +++  +                G    +     ++L+L    + A    A   +   
Sbjct: 722 IDAAIKRDENNYMAVTIRGNIYTLLGKDKEAVDSYNKALQLSQRYVPALNNLAMLYLRDP 781

Query: 275 KKR-KAEVILEKIWKVNP-HPEIANIY-----THLLSENTVGKLKRALRLEEINKE 323
           K R +A  +    +   P  P + + +      +  ++  V  L++AL     N +
Sbjct: 782 KTRLEALRLSYTAYMQRPGEPAVLDTFGYALAVNGRNDEAVQVLEKALENAGENPD 837



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 80/279 (28%), Gaps = 35/279 (12%)

Query: 107 HSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY-SLY 161
            S    +     +       +        + +   A E+ E + +  P      +     
Sbjct: 347 ESMAEARKVLEKDADNVAARMTLADALTMKGETEEAIEQYEAVTKNRPDDSATYLKMGAL 406

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +   G++  A+    +A+  SPD+      +   Y+   E   A   L          
Sbjct: 407 NYAM--GNMKQAETDLARAVTASPDSIRPMIILSAFYIKNGEKDMARATLEG----GLNG 460

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-- 279
           ++  ++L            ++  +     ++ +   ++    I  A   ++Q     A  
Sbjct: 461 SKTDSVLYFLLGRVELSDNNVDKAKEYLTKAKESNPDNSDPYITLAALHLAQKNPEGALT 520

Query: 280 --EVILEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLV 329
               +LE+       P+    +             +      +     E +   S E+ +
Sbjct: 521 EYTALLERK------PDYVRAWLGKALVLQLLHRPDEAEASFQ-----EALKTNSPEAYL 569

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
             +   +  G  DQA A         P    +  L AQ+
Sbjct: 570 SYAGSLVRGGKPDQALAVLDDGRGKLPFNASLERLRAQV 608


>gi|225849348|ref|YP_002729512.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643614|gb|ACN98664.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 556

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 87/232 (37%), Gaps = 21/232 (9%)

Query: 135 QYNIAHEKLEMM----LQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           +Y+ A E LE +     + P       +  + +ES    D   A+    +     PD   
Sbjct: 280 KYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYESL--NDYKKAKEIYEELYQQQPDNQE 337

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           + + + Q YV  KE+ +A+   N+         R    +L+A +     +G+   +    
Sbjct: 338 LVDRLTQVYVNLKEYDKALDVYNKLYTQNPNDYR----ILLAMADIEDKRGNTQRALELV 393

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIY--THL 302
            E+ K+  +        A  L      ++AE  L K  ++ P +P+    +   Y    +
Sbjct: 394 QEAEKIKPDDATVYFLKAIYLDKLKNWKEAEKALLKALELRPNYPDALNYLGYTYIDRDI 453

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             +  +  + +AL L   N   ++S   ++    + G   +A+      +K 
Sbjct: 454 NVDKGIELVNKALSLAPDNPAYLDS---LAWGYYKKGDYKKAYEILEKVLKK 502



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 26/261 (9%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNS 172
           ++  VY    +I L E     A E L+  L+      PA +      LY +  R    + 
Sbjct: 164 DDPNVYFKLARIYLFENNLQKAEEYLKQTLKIDKNFKPAWQILGE--LYKQQKR---YDE 218

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +     L  +P        + Q YV   ++  A   +++        N      L+ +
Sbjct: 219 AIKLYKSVLQDNPQNLDALNRLFQVYVDIDDFENASKTIDK----IITLNPKDNDALLKK 274

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            L             D  +++K   +++ A      +  S N  +KA+ I E++++    
Sbjct: 275 FLLYIKYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYESLNDYKKAKEIYEELYQQQ-- 332

Query: 293 PE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P+       +  +Y +L   +    L    +L   N      L+ ++ I  + G+  +A 
Sbjct: 333 PDNQELVDRLTQVYVNLKEYDKA--LDVYNKLYTQNPNDYRILLAMADIEDKRGNTQRAL 390

Query: 346 AKAMLAMKIAP-RKEIFLLLA 365
                A KI P    ++ L A
Sbjct: 391 ELVQEAEKIKPDDATVYFLKA 411



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 99/232 (42%), Gaps = 17/232 (7%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +++Y+ A +  + +LQ       A+  L+     I D  +A +   K + ++P      +
Sbjct: 213 QKRYDEAIKLYKSVLQDNPQNLDALNRLFQVYVDIDDFENASKTIDKIITLNPKD---ND 269

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIE 251
           A++++++L  ++ +A   L   +K  KE  +   A  ++  + E+ +  D   +     E
Sbjct: 270 ALLKKFLLYIKYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYESLN--DYKKAKEIYEE 327

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IANIYTHLLSENTVG 309
             +   ++        +  ++  +  KA  +  K++  NP+ +  I      +  E+  G
Sbjct: 328 LYQQQPDNQELVDRLTQVYVNLKEYDKALDVYNKLYTQNPN-DYRILLAMADI--EDKRG 384

Query: 310 KLKRALRLE----EINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAP 356
             +RAL L     +I  +      + + I L+ + +  +A    + A+++ P
Sbjct: 385 NTQRALELVQEAEKIKPDDATVYFLKA-IYLDKLKNWKEAEKALLKALELRP 435



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 72/219 (32%), Gaps = 17/219 (7%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     +A    P+   V   +V  Y+  K+  +A   L +         ++   + 
Sbjct: 114 PEKAISTLEEAYKRFPNNEKVISTLVDYYLENKQIDKARQLLEK----LSTIKKDDPNVY 169

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +     + ++  +     ++LK+  N   A     +    Q +  +A  + + + + 
Sbjct: 170 FKLARIYLFENNLQKAEEYLKQTLKIDKNFKPAWQILGELYKQQKRYDEAIKLYKSVLQD 229

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           NP        +  +Y  +  ++     K   ++  +N +  ++L+    + +     D+A
Sbjct: 230 NPQNLDALNRLFQVYVDI--DDFENASKTIDKIITLNPKDNDALLKKFLLYI---KYDKA 284

Query: 345 HAKAMLA---MKIAPRKEIFLLLAQIEQANSHNTDKILY 380
                     +K  P       +  +   + ++  K   
Sbjct: 285 KEILEDLQKTVKENPDNLFAKFMLGMAYESLNDYKKAKE 323


>gi|153206894|ref|ZP_01945712.1| hemY protein [Coxiella burnetii 'MSU Goat Q177']
 gi|212219576|ref|YP_002306363.1| HemY [Coxiella burnetii CbuK_Q154]
 gi|120576967|gb|EAX33591.1| hemY protein [Coxiella burnetii 'MSU Goat Q177']
 gi|212013838|gb|ACJ21218.1| HemY [Coxiella burnetii CbuK_Q154]
          Length = 392

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/379 (13%), Positives = 114/379 (30%), Gaps = 42/379 (11%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++     + I + +    T+ +  +  L      + ++F +          +      + 
Sbjct: 21  MTRDTGYLLIVYRHWSIETTLWAAILSLLILFILFYIIFRLLGRAARLSKNIHRWRKMKQ 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
           Y +  +    GL  +A    P A +K+              LV  L    A   +Q    
Sbjct: 81  YRRARQLTTAGLCELAEGRWPSAEQKLVKGAK----ITKNPLVNYLAAAQAANAQQSYER 136

Query: 140 HEKLEMML---------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            +    +           +  TR                   A     +    +P+    
Sbjct: 137 RDNYLRLAHTKAKGSDIAVDLTRA-------RLQISKNQWEQALATLERINRANPNHACT 189

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA- 249
            + + Q YV  ++W +    L + +K   E          A +L+  +K   +     A 
Sbjct: 190 LQLLKQVYVHLQDWEKLRHLLPRLRKQKVE---------SAEALDAFEKIIYVNLLSAAD 240

Query: 250 ---IESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
               ++L        +     I        SLI  ++  KA  ++E   K   +  + + 
Sbjct: 241 RKGKQALIAMWNSFPRRSTQEIELIDVYTHSLIKYDEGDKAIPLIESALKKEWNSNLVST 300

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y     E    +L  A    +   +  E  + + +++     + +A      ++K+ P  
Sbjct: 301 YGLARGEKKTDQLTTAETWLKKYPKEPELFLCLGRLSRREKFLGKARDYLQTSIKLMPSS 360

Query: 359 EIFLLLAQIEQANSHNTDK 377
             +  L Q+ +  +     
Sbjct: 361 AAYRELGQVYEEQNQKDSA 379


>gi|291514790|emb|CBK64000.1| hypothetical protein AL1_15960 [Alistipes shahii WAL 8301]
          Length = 601

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                  A E     ++  +T   A Y L          + A   A KA  +     W  
Sbjct: 50  IAGDSVRARELFLEAIRNDSTYAPAYYELAANGMYAM-PDEAVELARKAFRLDTTNKWYH 108

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           +   Q  + A  +  A+    + +    +   N  IL    +     K   + +    ++
Sbjct: 109 QFYGQALIYAGRYDEALKVYRRLQTENPKDPDNYRIL----AALYEQKQSPVMALVT-LD 163

Query: 252 SLKLCDNSIMA-SICAAKSLISQNKKRKAE----VILEKI-WKVNPHPEIANIYTHLLSE 305
           S +L    I   S    + L++ N+  KA      ++E   ++   H  + ++Y     +
Sbjct: 164 SAELRFGRIPVLSAMKRRLLVATNQIDKAVVEARAMVEAAPYEAQHHVILGDLYAIAKKD 223

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +    L RA     +  +S     +++      G  D
Sbjct: 224 S----LARAEYDRALQIDSTNVQTLMALADFHAGQQD 256


>gi|307245917|ref|ZP_07528000.1| hypothetical protein appser1_11170 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254890|ref|ZP_07536712.1| hypothetical protein appser9_11260 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259331|ref|ZP_07541058.1| hypothetical protein appser11_11280 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853136|gb|EFM85358.1| hypothetical protein appser1_11170 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862131|gb|EFM94103.1| hypothetical protein appser9_11260 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866567|gb|EFM98428.1| hypothetical protein appser11_11280 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 409

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ +I     +S     V I    ++   S  +++      +     +  +   F  
Sbjct: 2   LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  +   A K+ S  ++     +E ++ L++ 
Sbjct: 61  LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
            + A        A++                  L   +   G  N A   A   + +   
Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160

Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             P A    +++++        +  +       K++K +N    IL
Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203


>gi|307250255|ref|ZP_07532209.1| hypothetical protein appser4_10370 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306857696|gb|EFM89798.1| hypothetical protein appser4_10370 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 409

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ +I     +S     V I    ++   S  +++      +     +  +   F  
Sbjct: 2   LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  +   A K+ S  ++     +E ++ L++ 
Sbjct: 61  LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
            + A        A++                  L   +   G  N A   A   + +   
Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160

Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             P A    +++++        +  +       K++K +N    IL
Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203


>gi|172059231|ref|YP_001806883.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
 gi|171991748|gb|ACB62667.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MC40-6]
          Length = 754

 Score = 57.3 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 84/273 (30%), Gaps = 32/273 (11%)

Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +++ A    E + +        T    +      +C++G   +      +A+ +  D 
Sbjct: 18  AGRFDDARVLYEAIRRDEPDQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            ++                AI    +    A ++    A           D GD  A+  
Sbjct: 73  VYLNNFG-NMLRAHGRLDDAIGAYRRAIALAPDY----AEAHSNLGNALRDAGDADAAML 127

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SEN 306
              ++L L  +   A      +L  + +   A    EK   ++P       Y     ++ 
Sbjct: 128 SCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP------GYAQARFNQG 181

Query: 307 TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            V + +R              +  +   +   +  +  E   ++ A A    A +     
Sbjct: 182 NVLRAQRRPDEAIASYREAIALQPDLHAAHHALGMLLFERDDLEAAVASLTRAAESGEAD 241

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +F L A +E+A   +        + AL A PD
Sbjct: 242 CLFHLAAALERAGDLDGTVAS--LRRALVAAPD 272


>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
 gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
          Length = 545

 Score = 57.3 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 13/281 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            +  L Y L  +I LA+       E     L+       AV SL     +      A+  
Sbjct: 148 PDNPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVLSLGNLYLQEKKFKEAEEL 207

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
               L+  P++P + E + + Y  +     AI     K  N K  N N        +L  
Sbjct: 208 YKSVLEKYPNSPKILEKLAKLYTASGRIEEAIKIYE-KLINLKPRNVNYK---TEYALLL 263

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294
              G+   +     E   +  ++   +   A +L +  + +KA+ I E +    P     
Sbjct: 264 LSTGEFDKAKKILEELYYVNPSNPNVAFAYALTLEATGELKKAKEIYENLLNRFPENIKV 323

Query: 295 ---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  IY  L +     +L    + + +  +  E L + +    +    D+A       
Sbjct: 324 IERLIGIYLDLGNYEDAKRL--IEKAKVLAPDKKEILFLEADYYSKTKQYDKALEILKKL 381

Query: 352 MKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            K  P    ++  +  I   N  +        + A+   P+
Sbjct: 382 EKDYPNDSRVYF-MEAIVYDNLGDIKNAEKALRKAIELDPE 421



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 14/240 (5%)

Query: 134 RQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            +   A + L E M   P       Y L       GD+     Y  KAL+          
Sbjct: 131 GKLREAEKVLLEYMETDPD-NPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVL 189

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++   Y+  K++  A        +      +    +L   +      G +  +     + 
Sbjct: 190 SLGNLYLQEKKFKEAEELYKSVLEKYPNSPK----ILEKLAKLYTASGRIEEAIKIYEKL 245

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKL 311
           + L   ++      A  L+S  +  KA+ ILE+++ VNP +P +A  Y   L+    G+L
Sbjct: 246 INLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFAYA--LTLEATGEL 303

Query: 312 KRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQ 366
           K+A      L     E+++ +  +  I L++G+ + A      A  +AP K+ I  L A 
Sbjct: 304 KKAKEIYENLLNRFPENIKVIERLIGIYLDLGNYEDAKRLIEKAKVLAPDKKEILFLEAD 363



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 71/232 (30%), Gaps = 45/232 (19%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  +   A+  A + L+  PD P     +   Y   KE  +A   + +  K+       
Sbjct: 60  LRNKEYEKAKELAKEFLETYPDEPQAYIYLYTIYKFLKEDKKAFEVIKEAYKSFPFNEN- 118

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---- 280
              +++  + E  +KG +  +    +E ++   ++ +      +  +++   +K      
Sbjct: 119 ---VVLFLANEYINKGKLREAEKVLLEYMETDPDNPLPYYLLGRIYLAKGDIQKGMEYFL 175

Query: 281 VILEKIWKVNPH----------------------------PE-------IANIYTHLLSE 305
             LEK     P                             P        +A +YT   S 
Sbjct: 176 KALEKKKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYPNSPKILEKLAKLYTA--SG 233

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                +K   +L  +   +V      + + L  G  D+A         + P 
Sbjct: 234 RIEEAIKIYEKLINLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPS 285


>gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120]
 gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120]
          Length = 605

 Score = 57.3 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 85/305 (27%), Gaps = 60/305 (19%)

Query: 126 EVQIALAER-------QYNIAHEKLEMMLQ-IPATREF-AVY-SLYFESCRIGDLNSAQR 175
           + Q              Y  A       LQ          V  ++Y     +GD  SA  
Sbjct: 282 DAQAYYQRGLIYEAWQDYQSALADYNQSLQLNSELAVVYGVRANIYRH---LGDYPSALA 338

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              + L++ P+                ++  AI   NQ  +         A     R++ 
Sbjct: 339 DGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQALQINPNI----AEAYYGRAIA 394

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +    D I +  D  +S+++  +   A      +       + A     +   +N  P++
Sbjct: 395 HEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQALTIN--PQL 452

Query: 296 ANIY-----------------------THLLSENTVGKLKRALRLEEI------------ 320
           +  Y                         L  E+      RA     +            
Sbjct: 453 SEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADYTQ 512

Query: 321 ----NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNT 375
               N    E      +  L +G +++A A    A+K  P     +LL A I + N  + 
Sbjct: 513 SIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRADILR-NRGDY 571

Query: 376 DKILY 380
              + 
Sbjct: 572 QAAIA 576



 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 70/213 (32%), Gaps = 18/213 (8%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             + F S  + D   A  +   A++I+P+                +++ AI   +Q  + 
Sbjct: 42  RGITF-SRELKDYQGAIAFFNLAVEINPNYAQAYYHRANARYCLADFTAAIADYDQALQI 100

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM------ASICAAKSLI 271
              +    A     R      +GD   +  + I +++             A+    + L 
Sbjct: 101 NPTF----AEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLN 156

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS------ENTVGKLKRALRLEEINKESV 325
           + ++    E I++    +  HP  A  Y+ +              +    R  +++    
Sbjct: 157 NNDQGNYQEAIIDLQQALQWHPYFAAAYS-IRGNIYYKLGEYRQAIADHERAVQLDPNLA 215

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           E+          +G+  +A A     ++I P +
Sbjct: 216 EAYQNRGNAHYALGAYQKAIADYNRTLEINPHQ 248


>gi|238787720|ref|ZP_04631517.1| Cellulose synthase protein C [Yersinia frederiksenii ATCC 33641]
 gi|238724063|gb|EEQ15706.1| Cellulose synthase protein C [Yersinia frederiksenii ATCC 33641]
          Length = 1145

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 74/208 (35%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEY-----LVY-----LLEVQI--ALAERQYNI 138
           GL      +   A ++     +  T   +      L+      LL  Q   AL      +
Sbjct: 300 GLAYARGGDRAQALRLFEQAQKVDTNGQKSDKWISLIKTNRYWLLSDQGDKALKAGDIAL 359

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   QI  +  +A+  L   +    D  SA++Y  +AL + P        +   Y
Sbjct: 360 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLDPANSSAVRGLANIY 419

Query: 199 VLAKEWSRAITFL-----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  +A+ +L     NQ+ K     +  +  +L  ++   A +     +    +E+ 
Sbjct: 420 QRESP-QKALNYLNNLPRNQQVKLRDTLDSLQLDMLKQQAEALAARQQWHLAAEKYLEAQ 478

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           K   + +  +   A++L       +A+ 
Sbjct: 479 KRAPDDVWITYRLAQALEQDGHLAQADA 506



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 87/309 (28%), Gaps = 51/309 (16%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             G  ++ A +I LA++ +    Q     +  L+ L    +A+A      A +  +  L+
Sbjct: 346 DQGDKALKAGDIALAQQKYQQARQIDGSDSYALIGL--GDVAVARHDDKSAEQYYQQALR 403

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV--------VQQYVL 200
           +      AV  L     R     +         +         +++         +    
Sbjct: 404 LDPANSSAVRGLANIYQRESPQKALNYLNNLPRNQQVKLRDTLDSLQLDMLKQQAEALAA 463

Query: 201 AKEWS-RAITFLNQKKKNAKE---------WNRNRAILLIARS----LENADKGDMIASY 246
            ++W   A  +L  +K+   +                L  A +    L +   GD    Y
Sbjct: 464 RQQWHLAAEKYLEAQKRAPDDVWITYRLAQALEQDGHLAQADAQFHQLVSRKPGDPEQVY 523

Query: 247 HDAI---------ESLKLCDNSIMA-----------------SICAAKSLISQNKKRKAE 280
             A+         ++L   D    A                  +  A+ L     +  A 
Sbjct: 524 AYALYLSSTERDSQALAHLDTLPKAQWNDNIRELDQRLKLDQVLTLARQLRGSGDEIGAI 583

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             L +    N   ++      L   +    L    R+     E+ ++ +   +  +  G 
Sbjct: 584 TALRQQ-PANTQIDLTLADWALERGDYSEALAGYQRVRTREPENPDARLGEIESYIAAGH 642

Query: 341 IDQAHAKAM 349
           +  A     
Sbjct: 643 LSDARQHLQ 651



 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 119/343 (34%), Gaps = 50/343 (14%)

Query: 73  FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIA 130
                ++  D GY  L   + +  A     A    + + +          L + LEV   
Sbjct: 179 RLYFSQQKADLGYAMLAK-VAANPAGASDAANLWMNTIKEMTVSPQSVAALTHFLEV--- 234

Query: 131 LAER-QYNIAHEKL---EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            +   Q +IA ++L   + ML  P    R   +          G   +A     +AL  S
Sbjct: 235 FSTGPQADIARKELADQQAMLADPTYQARISGL-----AKVESGAGTTAIPALKQALAAS 289

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRN-------RAILLIARSL 234
           P+ P +  A+   Y    + ++A+    Q +K   N ++ ++        R  LL  +  
Sbjct: 290 PNDPELLGALGLAYARGGDRAQALRLFEQAQKVDTNGQKSDKWISLIKTNRYWLLSDQGD 349

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292
           +    GD+  +     ++ ++  +   A I      ++++  + AE   ++  +++P   
Sbjct: 350 KALKAGDIALAQQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLDPANS 409

Query: 293 ---PEIANIYTHLLSENTV---------GKLKRALRLEEIN----KESVESLVIVSKIAL 336
                +ANIY     +  +          ++K    L+ +     K+  E+L    +  L
Sbjct: 410 SAVRGLANIYQRESPQKALNYLNNLPRNQQVKLRDTLDSLQLDMLKQQAEALAARQQWHL 469

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
                 +A  +A   + I      + L   +EQ          
Sbjct: 470 AAEKYLEAQKRAPDDVWI-----TYRLAQALEQDGHLAQADAQ 507


>gi|115380266|ref|ZP_01467282.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|310821105|ref|YP_003953463.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115362721|gb|EAU61940.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394177|gb|ADO71636.1| TPR repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 435

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 105/300 (35%), Gaps = 33/300 (11%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G   + A N   A+++     ++    +E    L +   +LA+     A +  E +L+ 
Sbjct: 9   RGYEQLKAGNYDEAKRLFLAHEEKAGTASETQALLRQAAASLAKSDLEGAAKVYEQLLER 68

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             +       L   S  +G L++A+ +AT A+ + P+       +   +    + + A+ 
Sbjct: 69  NPSLPEIYLGLTRISLFLGQLDAARVHATAAVRLGPELGLAWTLLGLVHEAEGDVAGALP 128

Query: 210 FLNQK---------------KKNAKEWNRNRAILLIARSLENADKG-----------DMI 243
            L++                +          AI  + R++E                   
Sbjct: 129 HLSKATELSPSVFLCQFNLGRVLGVAGRPTEAIAALTRAVELEPGNPDGFYTLGIVYKQA 188

Query: 244 ASYHDAIESLKLCDNSIMASI----CAAKSLISQNKKRKAEVILEKIWKV-NPHPEIAN- 297
             Y +++ S +   +    ++      A  L    + + A  IL++       HP +   
Sbjct: 189 RQYENSLRSFEKAKDLAPKNVDYWATLADVLFEVREFQAARDILDRGLAACGEHPALLEK 248

Query: 298 -IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + T ++  +  G ++   R  ++     +  + ++ +AL     D++   A   ++  P
Sbjct: 249 ALATAMMLSDNAGAIRYVERELKVVPNHEQGWINLANLALLEKDFDKSEKAARELLRRNP 308


>gi|124268183|ref|YP_001022187.1| putative porphyrin biosynthesis-like protein [Methylibium
           petroleiphilum PM1]
 gi|124260958|gb|ABM95952.1| putative porphyrin biosynthesis-related protein [Methylibium
           petroleiphilum PM1]
          Length = 415

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 108/404 (26%), Gaps = 31/404 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  +I    +  + + +  ++      V++ W       S  + + IL         L  
Sbjct: 1   MRNVIWLLLLAIVAVVAASLLGSNDNLVTLYWAPWRVDLSFNLFMVILVGLCLVLNALIQ 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
                +  P         R       AL   L          A K               
Sbjct: 61  AVGLLIGLPRRAREWRVSRRDRIAQGALREALSQYFGGRYGRAHKAAQRAVAIQADTPEL 120

Query: 113 QHTFHNEYLVYLLEVQIA-LAERQYNIAHEKLEMM-LQIPAT----REFAVYSLYFESCR 166
           +       L +LL        + +     +  + + L    T     E     L  E   
Sbjct: 121 RQDAEFTVLGHLLAAGSLHRLQDRTRRDEQLAQALDLARRNTAARPAEEGARLLAAE-WA 179

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + D ++A+        + P     T+A+   ++   LA+E   A+       K+      
Sbjct: 180 LDDRDAARTL-ELLSQLPPGVSRRTQALRLKLKAARLAQEPLEALKTARLLAKHQGFSPA 238

Query: 224 NRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               L+   ++E  D   D   +     E        ++ +   A+ L++      A   
Sbjct: 239 AAQGLMRTLAIEALDTARDTDQTQRVWREFDPADRRDVVVAAHGARQLVALGATEDARTW 298

Query: 283 LEKIW---KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           L   W      P  E   +A      +       L R     +           V +  +
Sbjct: 299 LRPFWDRVATLPREERDMLAFALADAVDGIGPEWLPRLEAALQSCPGEGALAYGVGRAMM 358

Query: 337 EMGSIDQAHAKAMLAMKIA---PRKE--IFLLLAQIEQANSHNT 375
                 +A A    A +     P      +L LA + + +    
Sbjct: 359 ARQLWGKARALLEQAARDEALTPTVRREAWLHLAAMAEQDRDEE 402


>gi|152997227|ref|YP_001342062.1| TPR repeat-containing protein [Marinomonas sp. MWYL1]
 gi|150838151|gb|ABR72127.1| TPR repeat-containing protein [Marinomonas sp. MWYL1]
          Length = 392

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 90/262 (34%), Gaps = 25/262 (9%)

Query: 134 RQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-- 186
            +   A    + +L  P       R   +  L  +    G L+ A R        S    
Sbjct: 84  GEIQKAINIHQNLLARPEISQREMRMVQLE-LASDFMSAGLLDRAGRLLLNMASTSRKSE 142

Query: 187 -APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMI 243
             P +   +V  Y   + W +AI   ++  K        +  A      + E   K    
Sbjct: 143 FQPKILTLLVDLYEFEQSWDKAIQIGSELIKETPTKKEIKRLAHFHCEMAQELQKKEQWK 202

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIAN 297
            ++    ++L +  + + ASI AA  L SQ + R A   L+   + +P       P++  
Sbjct: 203 QAFQHYKDALDVDSSCVRASIGAADVLNSQGRYRDAIKELKHAAEQDPEFISIIIPKLKE 262

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAP 356
            Y  +              L+E N++   + +I++ +        D A    +  ++  P
Sbjct: 263 CYQKVWGSGGY-----IKFLQEQNQKKPSTALIMALVQHYMETDKDYAEMFLVEQLRQHP 317

Query: 357 RKEIF--LLLAQIEQANSHNTD 376
             + F  L+  Q+  +  +N  
Sbjct: 318 TIKGFKELISLQLADSQGYNQQ 339


>gi|115378279|ref|ZP_01465447.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310821098|ref|YP_003953456.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364721|gb|EAU63788.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309394170|gb|ADO71629.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 479

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 85/263 (32%), Gaps = 9/263 (3%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A    +  + Q +  +      L    A     Y+ A +  E ++Q       A ++L
Sbjct: 53  ATAEVPSAPAASQDSEDSGPHALFLSALAAFDAGDYDRARKGFEQVVQTSPQSLNAQFNL 112

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              + R G L  AQ    K L   P        + + Y + ++++ AI         A  
Sbjct: 113 GLIAERQGRLADAQAAYEKVLAKEPGHQPSLLNLGRLYRVQEKFAEAIRLYEGAL--AAP 170

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            + +   LL   ++     G    +   A   L    ++  A    A     Q + R AE
Sbjct: 171 GHAHDVALLNNLTVAYRLAGQFAKAEATARRVLARSKDNPEAYKNLALVYYDQGQYRLAE 230

Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           ++     K+       +  +  IY  L        L +  +   IN +     + +  ++
Sbjct: 231 LVSANARKLAENDPGVYNNLGMIYLKLN--ERPRALAQFQKAVSINDKFAPGYLNIGAMS 288

Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358
           L       A      A+++ P  
Sbjct: 289 LAYRDYAGAERAFARAVELDPTS 311


>gi|282164293|ref|YP_003356678.1| hypothetical protein MCP_1623 [Methanocella paludicola SANAE]
 gi|282156607|dbj|BAI61695.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 275

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 81/262 (30%), Gaps = 36/262 (13%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +E +  L      + +  ++ A    + ML I      A + L       GD   + +  
Sbjct: 21  DEAVSLLKSAHANMQKGNFDRAIVDFKGMLAINKDYAPAHFGLGLAYNEKGDAKKSIKEL 80

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ PD      ++   Y+   +   A   L    +  K+   +R       +    
Sbjct: 81  KRAIELDPDVVQPRTSLALVYLNLDKPKDAERELEGAVEVGKKDTESR----FYLANVYY 136

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             G    +     E+LKL      A        ++  ++ KA   L K            
Sbjct: 137 MNGKSDEAVAILKEALKLDPMFSDARYNLGILYMAMGQRSKAIKELLKA----------- 185

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356
                                E++ + +++   ++K  +       A  +  + +  +P 
Sbjct: 186 --------------------IELDPDDIDARRNLAKAYIGQEKYGLAQEQLDIVLLESPK 225

Query: 357 RKEIFLLLAQIEQANSHNTDKI 378
            +E   LL  +++        +
Sbjct: 226 DQEARDLLDDLDKEEKAEQKSV 247


>gi|83594191|ref|YP_427943.1| hypothetical protein Rru_A2859 [Rhodospirillum rubrum ATCC 11170]
 gi|83577105|gb|ABC23656.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 784

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 82/285 (28%), Gaps = 43/285 (15%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
            + P A +            +     LL  Q  IALAE   + A    + +         
Sbjct: 33  GDRPGALEACRNALAL-APDHP---DLLAAQGAIALAENDASQARAAFDHLAATTPADAR 88

Query: 156 AVYSLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             + L      +G+   A     +A     +P A    +  +        +  A+  L +
Sbjct: 89  GWHGLGRVHLALGEPADALLALDRATERAQAPLAGLAHDRALALR-QLGRFDEALATLER 147

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +++         LL  ++           +   A + L    +   A    A +L++ 
Sbjct: 148 ALEHSP----GDCALLTQKARVLERARRPRDAAEVAGQVLARHPDDATAQAVLADALLTL 203

Query: 274 NKKRKAEVILEKIWKVNPHPEIAN-------IYTHLLSENTVGKLKRALRLEEIN----- 321
            +  +A         + P   + +         T     + + ++ R LR+   +     
Sbjct: 204 GRPGEA---------LAPARALLDRLLAPPAAATPEALLDALERVGRCLRVLGRHGVWVE 254

Query: 322 ---------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                     +  ++L  ++      G    A      A+ + P 
Sbjct: 255 DSRRVCARLPDHPDALSALATALWWSGDFPGALVPLRRALVLDPS 299


>gi|148230096|ref|NP_001087833.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Xenopus laevis]
 gi|51949982|gb|AAH82353.1| Ogt-prov protein [Xenopus laevis]
          Length = 1063

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 101/300 (33%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +     AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|307248003|ref|ZP_07530032.1| hypothetical protein appser2_9850 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306855401|gb|EFM87575.1| hypothetical protein appser2_9850 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 403

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ +I     +S     V I    ++   S  +++      +     +  +   F  
Sbjct: 2   LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  +   A K+ S  ++     +E ++ L++ 
Sbjct: 61  LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
            + A        A++                  L   +   G  N A   A   + +   
Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160

Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             P A    +++++        +  +       K++K +N    IL
Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203


>gi|91200490|emb|CAJ73538.1| similar to N-acetylglucosaminyltransferases (O-GlcNAc transferase)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 568

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 11/193 (5%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     K LD++P        +   Y    E  +AI+      K    +    A   
Sbjct: 207 PEKALTEFQKTLDLNPRDAEAHNYLGIIYYEMNEIEKAISAHQTAVKLKNNYT--DAYNN 264

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-- 287
           +  +L      ++  +      +LKL  +   A       L  +   ++A   LEK    
Sbjct: 265 LGIAL--FAHNNLNEAKDAFETALKLRADFAEAHYNLGLILSKEGNSKEAIASLEKAIAI 322

Query: 288 --KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              + P H ++  IYT +   +    L         +    E+     ++A E+G +D++
Sbjct: 323 SNAIAPAHFKLGEIYTKINMPDKA--LSAYESAFSDDPSYEEAYYNYGELAAEIGDVDKS 380

Query: 345 HAKAMLAMKIAPR 357
                  ++I P 
Sbjct: 381 IRAWKKTIEINPT 393


>gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101]
 gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1694

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 75/230 (32%), Gaps = 15/230 (6%)

Query: 135  QYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            +Y  A    E  L+I       +    +  E         A     KAL+I PD      
Sbjct: 1193 RYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER--YEEAVAAFEKALEIKPDFHEAWH 1250

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                  +  + +  A+    +  +   +++   A  L   +L   ++     +     ++
Sbjct: 1251 NKGNALIKLERYEEAVAAYEKALEIKPDFH--DAWFLKGNALIKLER--YEEAVAAYEKA 1306

Query: 253  LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENT 307
            L++  +   A      +LI   +  +A    EK  ++   P+    +       +  E  
Sbjct: 1307 LEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIK--PDFHEAWFLKGNALIKLERY 1364

Query: 308  VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +    +  EI  +  E+  +       +   ++A A    A++I P 
Sbjct: 1365 EEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPD 1414



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 73/230 (31%), Gaps = 15/230 (6%)

Query: 135  QYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            +Y  A    E  L+I       +    +  E         A     KAL+I PD      
Sbjct: 887  RYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLER--YEEAVAAFEKALEIKPDFHEAWH 944

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                     + +  A+    +  +   +++   A  L   +L   ++     +     ++
Sbjct: 945  NKGNALGNLERYEEAVAAYEKALEIKPDFH--YAWFLKGIALGKLER--YEEAVAAYEKA 1000

Query: 253  LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLS-ENT 307
            L++  +   A      +L    +  +A    EK  ++   P+    +      L + E  
Sbjct: 1001 LEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIK--PDFHEAWHNKGIALENLERY 1058

Query: 308  VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +    +  EI  +  E+          +   ++A A    A++I P 
Sbjct: 1059 EEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPD 1108



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 15/228 (6%)

Query: 135  QYNIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            +Y  A    E  L+  P   E      +            A     KAL+I PD      
Sbjct: 1397 RYEEAVAAYEKALEIKPDFHEAWHNKGIALGKLER--YEEAVAAFEKALEIKPDFHEAWH 1454

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                  +  + +  A+    +  +   +++   A  L   +L   ++     +     ++
Sbjct: 1455 NKGNALIKLERYEEAVAAYEKALEIKPDFH--EAWFLKGNALIKLER--YEEAVAAYEKA 1510

Query: 253  LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENT 307
            L++  +   A      +LI   +  +A    EK  ++   P+    +       +  E  
Sbjct: 1511 LEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIK--PDFHEAWFLKGNALIKLERY 1568

Query: 308  VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               +    +  EI  +   S++ +  +  EMG IDQA      A +I 
Sbjct: 1569 EEAVAAYEKALEIKPDDEYSIINLGLVKYEMGFIDQAIENWQAATEIN 1616



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 68/193 (35%), Gaps = 11/193 (5%)

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
               A     KAL+I PD  +         +  + +  A+    +  +   +++   A  L
Sbjct: 1126 YEEAVAAYEKALEIKPDYHYAWNGKGIALIKLERYEEAVAAFEKALEIKPDFH--DAWFL 1183

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
               +L N ++     +     ++L++  +   A      +L    +  +A    EK  ++
Sbjct: 1184 KGNALGNLER--YEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEI 1241

Query: 290  NPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               P+    +       +  E     +    +  EI  +  ++  +     +++   ++A
Sbjct: 1242 K--PDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALIKLERYEEA 1299

Query: 345  HAKAMLAMKIAPR 357
             A    A++I P 
Sbjct: 1300 VAAYEKALEIKPD 1312



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 19/232 (8%)

Query: 135 QYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +Y  A    E  L+I       + +  +   +        A     KAL+I PD      
Sbjct: 309 RYEEAVAAYEKALEIKPDFHEAWFLKGIALINLER--YEEAVAAYEKALEIKPDFHEAWF 366

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                    + +  A+    +  +   +++   A  L   +L N ++     +     ++
Sbjct: 367 LKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWFLKGIALGNLER--YEEAVAAYEKA 422

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           L++  +   A      +L +  +  +A    EK  ++   P+    +   L  N +G L+
Sbjct: 423 LEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIK--PDFHEAWF--LKGNALGNLE 478

Query: 313 RALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           R             I  +  ++  +       +   ++A A    A++I P 
Sbjct: 479 RYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPD 530



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 11/193 (5%)

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
               A     KAL+I PD               + +  A+    +  +   +++   A   
Sbjct: 1364 YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWHN 1421

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
               +L   ++     +     ++L++  +   A      +LI   +  +A    EK  ++
Sbjct: 1422 KGIALGKLER--YEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEI 1479

Query: 290  NPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               P+    +       +  E     +    +  EI  +  E+  +     +++   ++A
Sbjct: 1480 K--PDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEA 1537

Query: 345  HAKAMLAMKIAPR 357
             A    A++I P 
Sbjct: 1538 VAAYEKALEIKPD 1550



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 19/232 (8%)

Query: 135  QYNIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            +Y  A    E  L+  P   E      +  E+        A     KAL+I PD  +   
Sbjct: 1057 RYEEAVAAYEKALEIKPDFHEAWHNKGIALENLER--YEEAVAAYEKALEIKPDYHYAWH 1114

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                     + +  A+    +  +   +++         + +          +     ++
Sbjct: 1115 NKGDALENLERYEEAVAAYEKALEIKPDYH----YAWNGKGIALIKLERYEEAVAAFEKA 1170

Query: 253  LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            L++  +   A      +L +  +  +A    EK  ++   P+    + +      + KL+
Sbjct: 1171 LEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIK--PDFHEAWNN--KGIALEKLE 1226

Query: 313  R-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            R         +  EI  +  E+        +++   ++A A    A++I P 
Sbjct: 1227 RYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPD 1278



 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 11/193 (5%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     KAL+I PD            +  + +  A+    +  +   +++   A  L
Sbjct: 276 YEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFH--EAWFL 333

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +L N ++     +     ++L++  +   A      +L +  +  +A    EK  ++
Sbjct: 334 KGIALINLER--YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEI 391

Query: 290 NPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P+    +          E     +    +  EI  +  E+  +       +   ++A
Sbjct: 392 K--PDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEA 449

Query: 345 HAKAMLAMKIAPR 357
            A    A++I P 
Sbjct: 450 VAAYEKALEIKPD 462



 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     KAL+I PD               + +  A+    +  +   +++   A  L
Sbjct: 480 YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--DAWFL 537

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +L N ++     +     ++L++  +   A      +L +  +  +A    EK  ++
Sbjct: 538 KGNALGNLER--YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEI 595

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEE-------INKESVESLVIVSKIALEMGSID 342
              P+    +   L  N +G L+R             I  +  ++  +       +   +
Sbjct: 596 K--PDFHEAWF--LKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYE 651

Query: 343 QAHAKAMLAMKIAPR 357
           +A A    A++I P 
Sbjct: 652 EAVAAYEKALEIKPD 666



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 19/197 (9%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     KAL+I PD               + +  A+    +  +   +++   A  L
Sbjct: 548 YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWFL 605

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +L N ++     +     ++L++  +   A      +L +  +  +A    EK  ++
Sbjct: 606 KGNALGNLER--YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEI 663

Query: 290 NP--HPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGS 340
            P  H      Y   L  N +G L+R         +  EI  +  E+         ++  
Sbjct: 664 KPDFH------YAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER 717

Query: 341 IDQAHAKAMLAMKIAPR 357
            ++A A    A++I P 
Sbjct: 718 YEEAVAAFEKALEIKPD 734



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 19/272 (6%)

Query: 129  IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                  +Y  A    E  L+I       +    +  E         A     KAL+I PD
Sbjct: 779  ALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER--YEEAVAAFEKALEIKPD 836

Query: 187  APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                           + +  A+    +  +   +++   A      +LEN ++     + 
Sbjct: 837  FHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWHNKGIALENLER--YEEAV 892

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
                ++L++  +   A      +L    +  +A    EK  ++   P+    + +    N
Sbjct: 893  AAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIK--PDFHEAWHN--KGN 948

Query: 307  TVGKLKRALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +G L+R             I  +   +  +      ++   ++A A    A++I P   
Sbjct: 949  ALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFH 1008

Query: 360  IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                L  I        ++ +   + AL   PD
Sbjct: 1009 EAWFLKGIALGKLERYEEAVAAYEKALEIKPD 1040


>gi|307263674|ref|ZP_07545283.1| hypothetical protein appser13_10860 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870987|gb|EFN02722.1| hypothetical protein appser13_10860 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 409

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67
             +++ +I     +S     V I    ++   S  +++      +     +  +   F  
Sbjct: 2   LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126
                ++    R + K  +    GLM ++  +   A K+ S  ++     +E ++ L++ 
Sbjct: 61  LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
            + A        A++                  L   +   G  N A   A   + +   
Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160

Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             P A    +++++        +  +       K++K +N    IL
Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203


>gi|320159768|ref|YP_004172992.1| hypothetical protein ANT_03580 [Anaerolinea thermophila UNI-1]
 gi|319993621|dbj|BAJ62392.1| hypothetical protein ANT_03580 [Anaerolinea thermophila UNI-1]
          Length = 617

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 10/237 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDIS 184
             +    +     A       + +      A          +G +L+ A++    AL   
Sbjct: 244 MGEALRFQGNAEQAIAYYSQAISVNPQFAPAYLGRARARLALGKELDKARQDLETALARD 303

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P        +    ++ K    A+  L Q      +      ++ +AR       G++ A
Sbjct: 304 PQLGEAYLELAHLELIEKNPEEALQLLAQADSLLPDSP----LVALARGEAYLALGEVDA 359

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +   A  +  L    + A       L+ + +  +A   LE  + +    ++        +
Sbjct: 360 ALEQAQRANTLDLTLLPAYRLLGAVLLEKGEVEQAVEPLET-YLLYETNDLEAYILASRA 418

Query: 305 ENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                +    LK   R   +N  S E  +   ++ L     D+A      A ++   
Sbjct: 419 YEGANRLPEALKALDRALALNSRSPEIYIRRGELYLAQEEFDKAIDDFKAAFRLKKT 475


>gi|49613818|emb|CAG77270.1| cellulose synthase protein C [Pectobacterium atrosepticum SCRI1043]
          Length = 1526

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 109/315 (34%), Gaps = 40/315 (12%)

Query: 91  GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYL-------VYLLEVQIALAERQYNI 138
           GL+ + A +   A     + + + V++ ++   E L         + E   AL      +
Sbjct: 681 GLVYLRAGDRVKALAQFQKALQADVNRLNSGKWEGLIQSTQYWTTITEGDNALKANNLPL 740

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   Q+  T  +A+  L   +    +  +AQ    +AL + P        +V  Y
Sbjct: 741 ARQKYQQARQMDNTNAYALIGLGDVAVASKNDAAAQPLYQQALQLEPGNDNALRGLVGIY 800

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----ARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN   ++ +   R    LL       ++ +  ++     +     +  
Sbjct: 801 QRQSP-EKALAYLNSLPRSQQNTMRETLALLQLDILKQQADQLLEQQQWALAEEKYRQVN 859

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENT 307
           +   N I  +   A+ L  + K + A+ ++++     P P  A       +Y    + + 
Sbjct: 860 QQDPNDIWFAYRYAQVLRQRGKPQLADSVVQRA-TAVP-PASAEKNYVYSLYLSSTNRDE 917

Query: 308 VGKLKRALRL--EEINKE--------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              L     L   + N +        + ++ +  ++   + G    A A           
Sbjct: 918 QA-LAHLNTLPAAQWNDDMRDLSKRLTSQTTLAKAEAMRDAGDEIAAMAFLRQQPTDT-- 974

Query: 358 KEIFLLLAQIEQANS 372
             I LLLA    A  
Sbjct: 975 -RIDLLLADWALAQG 988



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 92/262 (35%), Gaps = 34/262 (12%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           + ML  P T +  + SL  +    G  ++      KAL  +P+AP +  A+   Y+   +
Sbjct: 265 QKMLSDP-TYQAHLRSL-VQVENGGSHSTTLNELNKALAATPNAPELIGAIGLVYLREGD 322

Query: 204 WSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +A+    +  +   +     +   ++   +      KGD      +A+++  L  N +
Sbjct: 323 RKKALEQFQKALQVDMSRLHSGKWEGLIQNTQDWTTIAKGD------NALKANNLALNWL 376

Query: 261 MAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-AL 315
                  + A ++  ++                +P   +        + N    +++   
Sbjct: 377 RLLPLLLVTAPQAYSAE--------------TASPEQFLMEQVRLGEANNKDDIVRQSLY 422

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF----LLLAQIEQAN 371
           RLE I   + E +    ++A+  G   QA         +AP    +    ++LA  ++ +
Sbjct: 423 RLELIAPNNPEVIAAKIRLAMRYGDQTQARQLLEKLKTLAPDSTAYRHASMILALTQEES 482

Query: 372 SHNTDKILYWTQSALHAMPDPL 393
                K    + +  +A     
Sbjct: 483 RQQLQKARSLSTAGRYAEAKAQ 504



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 35/134 (26%), Gaps = 6/134 (4%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L + +          A   L                L   +   G+  +A     +  
Sbjct: 946  TTLAKAEAMRDAGDEIAAMAFLRQQPTDTRIDLL----LADWALAQGEYTTALAEYQRIR 1001

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240
               P  P      +  ++   +   A   LN+   +     N  R +    +++ N  K 
Sbjct: 1002 TREPQNPDAQLGEIDAFIAQGQQDEARQRLNKLPVQAVDTLNGQRRVANAWQAVGNPQKS 1061

Query: 241  DMIASYHDAIESLK 254
                     I++ K
Sbjct: 1062 -TALFRQLKIDAQK 1074


>gi|225446942|ref|XP_002267416.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1023

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 98/300 (32%), Gaps = 43/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + +   E L+ +L+      P      +     E    GD+ +A+    +A   
Sbjct: 654 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 711

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN------- 236
            P++  +  A  +      E  RA   L + ++            ++ R L N       
Sbjct: 712 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNTGEERRL 771

Query: 237 ----------------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                                    G+   +       LK C + I   +  +      N
Sbjct: 772 LGEGLKLFPSFFKLWLMLGQLEERFGNFEKAKEAYDSGLKHCPSCIPLWLSLSHLEEKMN 831

Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332
              KA  +L    K NP  PE+      + +E+  G  K A  L     +E   S ++ +
Sbjct: 832 GLSKARAVLTMARKKNPQNPELWLA--AVRAESRHGNKKEADILMAKALQECPTSGILWA 889

Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             ++EM    Q   K++ A+K       +   +A++   +    DK   W   A+   PD
Sbjct: 890 -ASIEMVPRPQRKTKSLDALKKCDHDPHVIAAVAKLFWHDRK-VDKARTWLNRAVTLAPD 947


>gi|121605978|ref|YP_983307.1| HemY domain-containing protein [Polaromonas naphthalenivorans CJ2]
 gi|120594947|gb|ABM38386.1| HemY domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 429

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 57/438 (13%), Positives = 120/438 (27%), Gaps = 63/438 (14%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   + +  +  + +   +   +    V++ W       S  +++ +L        L   
Sbjct: 1   MRAALWFMALFGIAVAVALFAGNNQAVVTVFWPPHRVDISLNLMVLLLVGLFMLLHLASR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ------- 113
                 S P        ++     Y AL   L  + A     A K       Q       
Sbjct: 61  ALSALFSLPVEARRWRAQQKERAMYGALMDALAHLMAGRYIRASKSAQNALAQEKSLGVA 120

Query: 114 -------------HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
                               L +LL  + A A +   + ++ L++ LQ  A R       
Sbjct: 121 TDTSGHPTGHSDSLASQLRSLSHLLVAESAQALQNKALRNQHLQLALQNSAAR------- 173

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTE-----------AVVQQYVLA--KEWSRA 207
           + +  R G    A R+A +  D S    W+ +             ++       ++  +A
Sbjct: 174 HAQEVREGVQFRAARWALEDHDASAALDWLGQLPQGAARRTLALRMKLRAARYGRQTQQA 233

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--ASIC 265
           +       K+          ++   +LE  ++         A   L   + ++   A   
Sbjct: 234 LETARLLAKHRAFSPTAAQSIVRGLALELLNEAHDPMQLQQAWARLDDSERAMPELAIHA 293

Query: 266 AAKSLISQNKKRKAEVILEKIWK--VNPHPEIAN--------IYTHLLSENTVGKLKRAL 315
           A++ +        A   L  +W+  + P  E+ +        +    +       L R  
Sbjct: 294 ASRLMGLHGDAALARSWLVPVWERMLEPRSELGDNLRIKLITVLEAGMDTLDAEWLARIE 353

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-------EIFLLLAQIE 368
                +    +   +     L      +A      A      K           LLA+  
Sbjct: 354 AAHVSHPRDPKLQYLAGMACLSRQLWGKARQLLSQAAPALQDKLLHRKAWRALALLAE-- 411

Query: 369 QANSHNTDKILYWTQSAL 386
                +    +   + A 
Sbjct: 412 --QREDEAAAIEAYKRAA 427


>gi|320103076|ref|YP_004178667.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319750358|gb|ADV62118.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 892

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 90/296 (30%), Gaps = 32/296 (10%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
              +       L      +     R    A      +L+        +  L   +  +G 
Sbjct: 131 AEGRARLDR--LADFAAARARELNRDNLAAIRLYRKLLETAPRSTAVLRRLSRINLVLGR 188

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           +N A  Y+ +A+++ P+     + VV     A +   A T L            + + LL
Sbjct: 189 INEAVEYSRRAVELDPNDSESLQLVVLFLQRAGQLDEARTLLETVLAAPALRQDSASALL 248

Query: 230 IARSLENADKGDMIASYHDA---IESLKLCDNSIMASICAAKS----------------- 269
            AR L           +  A      ++  D+    ++  A+                  
Sbjct: 249 AARELGFLYVLQPERIHEGASLIARVVRALDDKAAGNLSRAELSRVLGNPPQTYLRFGET 308

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIA----NIYTHLLSENTVGKLKRALRLEEINKES- 324
           L++ N+  +A +  E+     P+ + A         L  +     L+    L        
Sbjct: 309 LLNANRPNEAALAFERGLVYAPN-DSALVTGLARARLRQDRAAEALRLVEGLIA-QPNVV 366

Query: 325 --VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
              E+  + S+    +G  ++A A+     K +PR   I   LA        + + 
Sbjct: 367 KFPETYRLQSEALEALGRGNEALARLEALAKASPRDVAIQAALADRLAREGRDQEA 422



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 81/297 (27%), Gaps = 38/297 (12%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            A    S         N    YL   +  L   + N A    E  L         V  L 
Sbjct: 281 KAAGNLSRAELSRVLGNPPQTYLRFGETLLNANRPNEAALAFERGLVYAPNDSALVTGLA 340

Query: 162 FESCRIGDLNSAQRYAT------------KALDISPDAPWV------TEAVVQQYVLAKE 203
               R      A R               +   +  +A           A ++    A  
Sbjct: 341 RARLRQDRAAEALRLVEGLIAQPNVVKFPETYRLQSEALEALGRGNEALARLEALAKASP 400

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              AI      +   +  ++    +L        D   +I      I++ ++ D      
Sbjct: 401 RDVAIQAALADRLAREGRDQEALAILTGLINGPIDPPALITLTDLLIKAERVTDLLK--- 457

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
                 L   N    A+ +L    ++   PE A ++            +    L      
Sbjct: 458 -IVGDLLARPNGVIAAQPLLA---RIVATPEFARLFLR----------QGIEGLSAEPPT 503

Query: 324 SVES-LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDK 377
             ES  V ++ IA ++  ++       L +K  P ++ +L L    +E     +  +
Sbjct: 504 LPESCRVALASIARQLNDLELQLQLDRLELKRNPNRQTYLQLFFGLVEAGRHGDAAE 560


>gi|163748696|ref|ZP_02155949.1| hemY protein, putative [Shewanella benthica KT99]
 gi|161331806|gb|EDQ02610.1| hemY protein, putative [Shewanella benthica KT99]
          Length = 389

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 69/413 (16%), Positives = 134/413 (32%), Gaps = 51/413 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ Y  ++   +C           +  T  +    T     +  L  F     L   
Sbjct: 1   MTRVLIYLGIVLFGLCISPFFEGMNGYLYFTIWDYEVETGVLFAVIALIVFYGLLQLTEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQ------- 112
              F L+       +  K       K    G +++A  +   A K M     +       
Sbjct: 61  AIIFILNLLLSSRLLPEKWRKKAARKYTLVGALALAEEDWSTAEKAMIKGAEKGELPTLN 120

Query: 113 --------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
                    H  + E     L  Q A  E    +A +     +    TR           
Sbjct: 121 LLAAARAAHHQNNAESRDKYL--QQAEQE---PLAIKA----VSTSRTRYL--------- 162

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLN---QKKKNA 218
            + G+L+ A+    K   +SP +      +   ++ Y    +W  A+  L    +K++  
Sbjct: 163 LQQGELDKARIELDK---LSPTSKSKQPVLKLALELYQAQADWH-ALKLLLPIIKKRQVL 218

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQN 274
            E +     +L   +L    + +              + +     + AS C    L   N
Sbjct: 219 SEADYQHLTILTNNALLIQAQSNSEQELEKVWHWLSRAERKEPQYL-ASYCLG--LHKFN 275

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +K +A+ IL K  K     +I+     +LS   V + ++   LE+   E +   ++++K+
Sbjct: 276 RKTEAKKILMKQIKSGLCSDISVALAKILSPADVEERRQIFALEKKYAEELSFQILLAKL 335

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
             +  +  QA           P K  +L L +  +        I  + Q+A+ 
Sbjct: 336 HSQNKNYRQAMTYWKKVCHQRPNKANWLALGETHEHLGEQNGAIQSYRQAAVT 388


>gi|126669092|ref|ZP_01740023.1| hypothetical protein MELB17_15484 [Marinobacter sp. ELB17]
 gi|126626447|gb|EAZ97113.1| hypothetical protein MELB17_15484 [Marinobacter sp. ELB17]
          Length = 388

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 20/260 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYS------LYFESCRIGDLNSAQRYATKALDISPDA 187
            + + A    + +L  P     A YS      L  +    G L+ A+    + +      
Sbjct: 83  GETDRAILIHQNLLDRPE--LPARYSPQVTLELALDYLNAGLLDRAEALLQQLMGDREYG 140

Query: 188 PWVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 ++  Y   +EW +A      L +   +   + +  A L   +S +   + D   
Sbjct: 141 RSAATQLIDLYEREREWDKASQVAHTLTRGNADPAMF-KILAYLTCEKSEQALRQDDRWG 199

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHL 302
           +   A E+L+   + +  ++   K L  Q   R+A  +  K+++ NP   PE  +    L
Sbjct: 200 AQRLAKEALEFDRSCVRGTLILMKLLTRQGSFREAGTMAIKVFEQNPDFGPEAIDQLMKL 259

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEI 360
             E+     K   +L ++ +    + ++++  +          A A     +++ P    
Sbjct: 260 EREHG-DIGKLGRKLRKLYESYPSTSLLLALVESVERRSGRPAAIALLRGELEVRPSVRG 318

Query: 361 FLL---LAQIEQANSHNTDK 377
            L    +A  E++ + N  +
Sbjct: 319 LLQLVEMAGYEKSMTTNEGR 338


>gi|84394673|ref|ZP_00993359.1| putative heat shock protein [Vibrio splendidus 12B01]
 gi|84374703|gb|EAP91664.1| putative heat shock protein [Vibrio splendidus 12B01]
          Length = 391

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 99/296 (33%), Gaps = 57/296 (19%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E +++ P  +E 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPDHKEG 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +V  Y   +EW++AI + N   
Sbjct: 143 AL----------------------------------QQLVAIYQQTREWNKAIHYGNILV 168

Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K  K+  + RA +       +++    G+   +     ++L      + ASI   K  ++
Sbjct: 169 KLGKKKMKMRATVAHFWCELAMQEQADGNRSKALQHFKKALSEDPKCVRASIALGKFHLA 228

Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKES 324
               +K    LE +      +     P +A  Y  L  E      +    L+    NK  
Sbjct: 229 NEDYQKTIDCLESVLEQDIDFISEVLPTLAECYHKLGQE-----AQLVEFLKACIQNKAG 283

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQANSHNT 375
           V + ++++++      +  A       +   P     + L    LA+ E+  + ++
Sbjct: 284 VSAELMLAQLVAHHEDVGSAQELLTKQLVKNPTMKGFYRLIDYHLAEAEEGRAKDS 339


>gi|87201047|ref|YP_498304.1| sulfotransferase [Novosphingobium aromaticivorans DSM 12444]
 gi|87136728|gb|ABD27470.1| sulfotransferase [Novosphingobium aromaticivorans DSM 12444]
          Length = 677

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 14/191 (7%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---------YLLEV 127
            +R      +AL     +IA+    LAR++     Q+       L           LL+ 
Sbjct: 93  DQRRATAALQALVRLQPAIASGWFLLARQLRK-AGQEEDAWRADLSGIHASSRDGELLKA 151

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             A+ + + + A   L   L+  A    A+  L   + R GD+ +A   A +A+D++P  
Sbjct: 152 AAAMNDGETDAAEALLNARLERQADDAPALRLLGEIAWRRGDMTTALDRAARAVDLAPGF 211

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               + +++  +     S A+       ++      +R IL    +      G    +  
Sbjct: 212 DLARDFLIRLLLQTNRLSEALDHAETLVRSPVPSPGHRLIL----ASVLVRLGHQERAAA 267

Query: 248 DAIESLKLCDN 258
              E L    +
Sbjct: 268 IYRELLAERPD 278



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 81/274 (29%), Gaps = 26/274 (9%)

Query: 100 IPLARKMHSYVSQQHTFH-------NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
               R+M                      V     Q+A        A   L+ ++++   
Sbjct: 51  ARALRRMGRQREALDRLDALAKANPRVPAVLYELGQVAADLGDQRRATAALQALVRLQPA 110

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-AVVQQYVL--AKEWSRAIT 209
                + L  +  + G    A R      D+S       +  +++        E   A  
Sbjct: 111 IASGWFLLARQLRKAGQEEDAWR-----ADLSGIHASSRDGELLKAAAAMNDGETDAAEA 165

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            LN + +   +     A  L         +GDM  +   A  ++ L     +A     + 
Sbjct: 166 LLNARLERQAD----DAPALRLLGEIAWRRGDMTTALDRAARAVDLAPGFDLARDFLIRL 221

Query: 270 LISQNKKRKAEVILEKIWKVN-PHP----EIANIYTHLLSENTVGKLKRALRLEEINKES 324
           L+  N+  +A    E + +   P P     +A++   L  +     + R   L     + 
Sbjct: 222 LLQTNRLSEALDHAETLVRSPVPSPGHRLILASVLVRLGHQERAAAIYR--ELLAERPDE 279

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            +    +  +   +G  D+A      A+   P  
Sbjct: 280 PQVWQNLGHVLKTLGHQDEAVEAYRAAVSRQPTM 313


>gi|307717854|ref|YP_003873386.1| lipoprotein [Spirochaeta thermophila DSM 6192]
 gi|306531579|gb|ADN01113.1| putative lipoprotein [Spirochaeta thermophila DSM 6192]
          Length = 454

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 98/325 (30%), Gaps = 45/325 (13%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A +     S +     +    LL V + L   +   A  +L  +L+       A+
Sbjct: 48  GRPEDAIRAFEEASARA--PEDPETRLLYVNLLLMAGKETEAEAELSKILEEYPDHVGAL 105

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI--------- 208
           Y+L       G     +R   + L + P       A+ +  +  K+++RA          
Sbjct: 106 YTLALLEGARGREEEHRRLLERILVLDPHHTGARAALGELLLSKKQYARAEKEFTTVLEQ 165

Query: 209 -------------------------TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                                      L +  + A ++    A    AR+ +  D+    
Sbjct: 166 DPGDLVALVGLGNVYLRTRKAEKAAEVLTRAIQEAPDYP--FAYADRARAWQMLDE--PE 221

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +  D   +++L           A+ LIS+ +  +A   L +   ++P   +A +Y    
Sbjct: 222 KAERDISRAIELDPGFSWHYYDRARILISEGQMDRALEDLSRAILLDPSNFLAYVY-RAR 280

Query: 304 SENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +  G +K A     R  E+  +     V  +           A           P + 
Sbjct: 281 IYDGKGMMKEACSDYARALELRPDYYYIYVPYAVSLYHEKDYRGAAGYFDKGFDAYPSEY 340

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384
             +LLA      + +   +  +   
Sbjct: 341 PLILLAATAYKRAGDDRMMRDYLTR 365


>gi|313499294|gb|ADR60660.1| Cellulose synthase subunit BcsC [Pseudomonas putida BIRD-1]
          Length = 1172

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 104/296 (35%), Gaps = 25/296 (8%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             L+    ++     Y  L    +S+A  ++  A + +  V +    +   +  L+ V  
Sbjct: 371 RALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVRRMAPDNESAVRGLMRVYQ 430

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---------ESCRIGDLNSAQRYATKA 180
           A +  +   A   L+ +      +  ++              E+ +  D ++A     +A
Sbjct: 431 AQSPGK---AQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEALQREDWSTASHVLGQA 487

Query: 181 LDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             ++PD PW+   +   ++      E   A   L Q +           + L +   +  
Sbjct: 488 AALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQPRDPATRYAHGLFLESSDRDAL 547

Query: 238 D----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-KVNPH 292
                +    A++   + +L+      M ++ +A+ L +Q +  +A  +LE    +    
Sbjct: 548 ALDSLRAVPQATWSADMHALEQRVQRRM-TLASAQQLQAQGRSVEATALLEAGLARGEGS 606

Query: 293 PE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P+   +   +     E+   +      L        ++ + V + A+  G++ QA 
Sbjct: 607 PDDLMLLADWAAARGEHGKARSYYQRVLVA-QPGRPDARLGVMESAVAEGNLQQAR 661



 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 6/261 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L + + ALA +    A        Q     E+A+  L   S   GD+ +A+R   +  
Sbjct: 353 ALLKKAEQALAAKDVRGARALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVR 412

Query: 182 DISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL--ENA 237
            ++PD       +++ Y      +    +  L  +++      R    L   R    E  
Sbjct: 413 RMAPDNESAVRGLMRVYQAQSPGKAQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEAL 472

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            + D   + H   ++  L  +        A SL  Q +  +A+    ++ +  P  + A 
Sbjct: 473 QREDWSTASHVLGQAAALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQP-RDPAT 531

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y H L   +  +   AL       ++  S  + +        +  A A+ + A +    
Sbjct: 532 RYAHGLFLESSDRDALALDSLRAVPQATWSADMHALEQRVQRRMTLASAQQLQA-QGRSV 590

Query: 358 KEIFLLLAQIEQANSHNTDKI 378
           +   LL A + +      D +
Sbjct: 591 EATALLEAGLARGEGSPDDLM 611


>gi|257092899|ref|YP_003166540.1| tetratricopeptide repeat-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045423|gb|ACV34611.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 746

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 7/202 (3%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
              A ++    LQ+ A       +L     R G ++ A     +A+ + P        + 
Sbjct: 546 RVAALQEYVASLQLEADWPSGNVNLGNLRLRQGRMDEAVAAFERAIALDPAFDGAYINLA 605

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             +      S A   L +            A L  A  L    +G+ +A+    +E+ +L
Sbjct: 606 DAWRQQGRESEAGNVLRRGLAVMP----RDAHLQHALGLSLTRQGEKVAALKAFVEAARL 661

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSE--NTVGKLK 312
             ++       A ++ S  K ++A  +L    K +P+  +I      +  E  +    L 
Sbjct: 662 APDNARYVYVHAIAVHSAGKLKEALTLLRAADKRHPNDLDILAALLSMSREAGDRQAALG 721

Query: 313 RALRLEEINKESVESLVIVSKI 334
            A +L  I  ++     +V+++
Sbjct: 722 YAKQLAGILPDNANLKRLVAEL 743


>gi|302342034|ref|YP_003806563.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
 gi|301638647|gb|ADK83969.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
          Length = 584

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 22/259 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A +  + +L+       A+  L   + + GD  SAQ     A + +P      +A
Sbjct: 206 GRLDEARQCYQRLLRQSPQAAAAMVGLGRVALQGGDAASAQSLFQWAREANPAYGGAVDA 265

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + + ++      +A   L Q            A  L  ++    D G    +      +L
Sbjct: 266 LTELHLAQGRPEQAAEVLAQA---DDMPGGLGAHRLARQARLFHDLGQARQADQALQRAL 322

Query: 254 KLCDNSI--MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-ANIYTHLLSENTVGK 310
                       + AA+  ++  +  KA   L ++ +    P +    +  L        
Sbjct: 323 AQDPALADGPEGLLAARCGLALGRPAKAVQALRRLARQTDQPRLKIEAWLMLAE------ 376

Query: 311 LKRALRLEEINKESVESLVI-VSKI-ALEMGSIDQA----HAKAMLAMKIAPRKEIFLLL 364
                 L +   E  E +   +++  A   G    A    HA A  A     R +    L
Sbjct: 377 ----AHLSQGRPEQAEEVFARMAQADAWPAGQRPFALHRLHAVAAAAYLRQGRPQAAAEL 432

Query: 365 AQIEQANSHNTDKILYWTQ 383
             + +  + +  + L W  
Sbjct: 433 VAVSRLMAPDDAENLAWLD 451


>gi|254515365|ref|ZP_05127426.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma
           proteobacterium NOR5-3]
 gi|219677608|gb|EED33973.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma
           proteobacterium NOR5-3]
          Length = 926

 Score = 56.9 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 102/321 (31%), Gaps = 44/321 (13%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +     ++   + ++H  +   L  L       A+  +  + +  + +  +      A 
Sbjct: 353 GDASKTEELARNILKEHEMNIPALGLL--AMALSAQGLHAESAQAYQQIATLNPESTQAK 410

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-------------------- 197
            +L  +    GD  +       A+ + P      E +++                     
Sbjct: 411 VALGSQQMVAGDTEAGIEQLQAAVALDPSNAQARERLIEAHLAVGDLDAAAAAGEAYLEA 470

Query: 198 --------------YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                          +  +++  A     +     +  N + +  + A ++ N D     
Sbjct: 471 APDTARSAVYLGRVRLQQEDYKGARELFEKAL-TLEPGNVSASGGMAALAVLNKDLDGAK 529

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYT 300
           A++  A+E+       ++ S+  A  L      +  + +L    + NP    P +A    
Sbjct: 530 AAFEQALEAN---PGDVLTSMNLAVVLEQTGDLQAMQAVLSAAMEANPGAVAPRLALARY 586

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKE 359
            L   +    +     +EE  +   +   I++   L +G+ + A   A   +++      
Sbjct: 587 ALSQNDADQAITLMAPVEENGEGDYQVHQILAGARLAVGNAEAARDNARRLLELRSNDPV 646

Query: 360 IFLLLAQIEQANSHNTDKILY 380
              L+A++E AN        +
Sbjct: 647 ALALVARVEAANGRPEQAQRH 667



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 52/197 (26%), Gaps = 4/197 (2%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             G+ ++A  N  L     ++         + L  +    +             L   ++
Sbjct: 512 SGGMAALAVLNKDLDGAKAAFEQALEANPGDVLTSMNLAVVLEQTGDLQAMQAVLSAAME 571

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                     +L   +    D + A        +       V + +    +       A 
Sbjct: 572 ANPGAVAPRLALARYALSQNDADQAITLMAPVEENGEGDYQVHQILAGARLAVGNAEAAR 631

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                  +   E   N  + L   +   A  G    +      +LKL   S        +
Sbjct: 632 D----NARRLLELRSNDPVALALVARVEAANGRPEQAQRHIDAALKLQPQSSELRKMLVE 687

Query: 269 SLISQNKKRKAEVILEK 285
           SLI Q K  +A   + K
Sbjct: 688 SLIQQQKLEQAGEEIAK 704



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 84/292 (28%), Gaps = 24/292 (8%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
            +  +A+  G ++ A  ++  A + +   +   +         L  QI L +     A  
Sbjct: 38  ARASEAIANGDLAAAELDVKTALQQNPENAAARS---------LYGQIYLRQINPGAAIG 88

Query: 142 KLEMML---QIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDISPDAPWVTEAVVQQ 197
           + E  L    IP TR      L     + G+           A   + D P    A+ + 
Sbjct: 89  EFERSLGAADIPETRLA----LAKALVQAGESAELLSEYEIGAYASTADMPEFKAALARA 144

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+   +    +         A     N  + L           D   +       +    
Sbjct: 145 YLAQAQ----VDEARSALAAADAAEANDYVDLTRAVFTLQLDKDSYKAKELLQSIVNRSP 200

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRA 314
            +  A          ++ +  AE    K    NP+     +  + T +         K  
Sbjct: 201 ANAEAWSLLGFLATREDDRAAAEEYFAKASAANPYRLGDRLQLVTTQIRLGKAEDADKDL 260

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            +LE++     E   +  ++  + G    A       +   P     LLL+ 
Sbjct: 261 AQLEKLIPNYPEVNFLRGQLYFDDGDYKNAIDAFSQVLTANPNHAGALLLSA 312


>gi|194451942|ref|YP_002047644.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205359078|ref|ZP_02666711.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194410246|gb|ACF70465.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205338979|gb|EDZ25743.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 1150

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIVQLQQAVSARQDDSEAVGALGQAYSQSGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|113866405|ref|YP_724894.1| O-linked N-acetylglucosamine transferase OGT [Ralstonia eutropha
           H16]
 gi|113525181|emb|CAJ91526.1| O-linked N-acetylglucosamine transferase OGT [Ralstonia eutropha
           H16]
          Length = 651

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 77/257 (29%), Gaps = 45/257 (17%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A   A    +ISP +P   + +    VL   W  A   L Q+        R  AIL 
Sbjct: 159 PQQALDSARLWKEISPTSPAAAQVLSTLLVLNGRWDDARPLLQQQLAAVPASQRGEAILQ 218

Query: 230 IARSLENADKGDMIASY--------------HDAIESLKLCDNSIMASICAAKSLIS--- 272
           + + L         A+                 A+   +        ++ A    +    
Sbjct: 219 LQQQLSRTSDAAGAATLLQDLTKNDAKLPETQLALARAREVAGDEPGALAALDQALRLRP 278

Query: 273 --------------QNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313
                         + +  +A  IL++    +P     H  +A +Y  L ++    + + 
Sbjct: 279 GYEAAALMAAELRAEKQPDEAVAILKRFLDKSPDSVNGHITLARLYL-LRNDMQSAR-QE 336

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRKE---IFLLLAQI 367
              L ++        + +   +L+  S  +A       +  ++  P       +  LAQI
Sbjct: 337 FETLRKVAPGDPRVPLALGLTSLQAKSYGEAEQYLKEYLQLVEKQPTANPDIAYQYLAQI 396

Query: 368 EQANSHNTDKILYWTQS 384
            +    +    + W   
Sbjct: 397 AE-ERKDYAGAIRWLDR 412


>gi|198429852|ref|XP_002128772.1| PREDICTED: similar to PRP6 pre-mRNA processing factor 6 homolog (S.
           cerevisiae) [Ciona intestinalis]
          Length = 937

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 115/334 (34%), Gaps = 46/334 (13%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SI+      AR M  Y    +   ++  ++L   + A  E+ +    + LE +LQ     
Sbjct: 546 SISHGAYECARAM--YAHALNLLPSKKSIWL---RAAYLEKNH-GTRDSLETLLQKAVAH 599

Query: 150 -PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            P      +           D+++A+     A   +P++  +  A V+      E  RA 
Sbjct: 600 CPKAEVLWLMG-AKSKWMANDISAARSILALAFQANPNSEDIWLAAVKLESENNEHDRAR 658

Query: 209 TFLNQKKKNAKEWNRNRA-------ILLIARSLENADK---------------------- 239
             L + + NA               + L+  +    D+                      
Sbjct: 659 KLLAKARANACTARVMMKSIKLEWCLNLLDDARSLLDEATNKYPDFAKLWMMKGQIFEQV 718

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANI 298
           G++ ++       L  C  +I   I  +K    +    KA  +LEK    NP+ PE+   
Sbjct: 719 GEIQSAREAYTAGLGKCPRAIPLWILLSKLEQKKGTLTKARAVLEKARLKNPNCPELWLA 778

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APR 357
              L  ++ +  +     +    +E   S ++ S+ A+ + +  Q   K++ A+K     
Sbjct: 779 SIRLEWKSDIKNIAS-SLMARALQECPSSGLLWSE-AIFIEARPQRKTKSVDALKKCEHD 836

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             + L +A++  +      K   W    +    D
Sbjct: 837 SHVLLAVARLFWSERK-LTKAREWFLRTVKIDQD 869


>gi|152985242|ref|YP_001349258.1| TPR domain-containing protein [Pseudomonas aeruginosa PA7]
 gi|150960400|gb|ABR82425.1| TPR domain protein [Pseudomonas aeruginosa PA7]
          Length = 755

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 68/244 (27%), Gaps = 22/244 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPW--------VTEAVV----QQYVLAKEWSRAITFLNQ 213
            IG + +    A +   I+P               A++    +    A  W RAI    Q
Sbjct: 514 AIGAVAALLSPAERVARIAPSLSDPLRAVRLSAAYALLPAIAELGTHAAAWRRAIDEYEQ 573

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +       R RA   +  +      G          E+L+   +   A +   + L + 
Sbjct: 574 AQ----LAQRERAEANLNLASLYQADGRPGLVQARLREALRRDADFAPARVALGQWLENA 629

Query: 274 NKKRKAEVILEKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            +  +A  +L+   +  P   +   A     +         +          ++     +
Sbjct: 630 GRDSEAIELLQDGIRRQPRSGLLRYAKGLALIRQGKREAARQALAEALAAEPDNPRHAYV 689

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ--SALHA 388
           ++    E G   +A       +   P +    L        + +            A++ 
Sbjct: 690 LAVAWHEAGQPGKAIEVLRALLARRPAERPARLALAGYLRQAGDIAGAETALAELRAIN- 748

Query: 389 MPDP 392
             DP
Sbjct: 749 PDDP 752


>gi|197300669|ref|ZP_02660276.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197291266|gb|EDY30618.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 1150

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109
           D  ++A   G+ ++ A                                     AR +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|183599250|ref|ZP_02960743.1| hypothetical protein PROSTU_02709 [Providencia stuartii ATCC 25827]
 gi|188021480|gb|EDU59520.1| hypothetical protein PROSTU_02709 [Providencia stuartii ATCC 25827]
          Length = 389

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 108/337 (32%), Gaps = 55/337 (16%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   +F    L      +  +A   Y+ A    + +         
Sbjct: 83  GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMAAGVYDRAENMFQQLTDEVD---- 138

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                + +S                           ++++  + L  +W++AI    +  
Sbjct: 139 -----FKQS-------------------------ALQSLLAIFQLTSDWTKAIETATKLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K   E  R   A      + ++    D+  +     ++ +   N    SI   +  I Q 
Sbjct: 169 KLGNEELRENIAHFYCELANQHLGSDDLDGALSLLNKAEQADKNCARVSIMKGRIFIEQE 228

Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              KA  +L+++++          P + + Y  +   +         +    N  +V + 
Sbjct: 229 HYDKAINVLKQVYEQDRELVAETLPLLYDCYQQIADMDAWEVY--LRQCVAGNTGAV-AE 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL-AQIEQANSHNTDKILYWTQSAL 386
           + ++ I +E  S + A +     ++  P   + + L+   +++A      + L   +  +
Sbjct: 286 LYLADIIVEKQSHEAAASYINDQIQRHPTMRLFYRLMDYHLKEAEEGRAKESLILLRKMV 345

Query: 387 -HAMP-DPLWISD-DGYLSSV--WLPLSPISKTLCYF 418
              +   P +     G+ S    W    P  ++    
Sbjct: 346 GEQIRTKPDYRCHKCGFTSHSLYWH--CPSCRSWDTI 380


>gi|200389197|ref|ZP_03215809.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199606295|gb|EDZ04840.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 1143

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597


>gi|322617883|gb|EFY14776.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
          Length = 1150

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109
           D  ++A   G+ ++ A                                     AR +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|207858854|ref|YP_002245505.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|206710657|emb|CAR35015.1| Cellulose biosynthesis protein subunit C [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
          Length = 1143

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597


>gi|205360321|ref|ZP_02682619.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205350236|gb|EDZ36867.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 1150

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|205357600|ref|ZP_02571940.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205330678|gb|EDZ17442.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
          Length = 1150

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|197249812|ref|YP_002148544.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197213515|gb|ACH50912.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 1150

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
 gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 1421

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 86/269 (31%), Gaps = 33/269 (12%)

Query: 73   FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA 132
                 K+   K  +A+    ++  +       K           HN+ L+ L +      
Sbjct: 827  AREFEKKKQWK--EAMTQYQIAAMS---EKVEKCRQEAVN--VLHNQGLIKLQK------ 873

Query: 133  ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             R +  A E     + +        ++      ++G+L  A     KAL++ P       
Sbjct: 874  -RDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFKKALELEPKDLQTYN 932

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +   YV   E++ AI   +Q  K     +   + +     +     GD   +  D  ++
Sbjct: 933  NLGAAYVELGEFNEAIELFSQALK----VDSQDSQIYQNLGVVRFKAGDKQGAIADYNQA 988

Query: 253  LKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHPEIANIY-----THLL 303
            +KL  N   A      +       + A      +L+       HP + + Y         
Sbjct: 989  IKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQL------HPRVVDAYTQRGIVRFE 1042

Query: 304  SENTVGKLKRALRLEEINKESVESLVIVS 332
             ++  G +       ++N +  E++   +
Sbjct: 1043 VKDIEGAIADFNDAIKLNPKHPEAIYNRA 1071



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 158  YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              +      + D+  A      A+ ++P  P           L K+   ++  LN+  + 
Sbjct: 1036 RGIVR--FEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQL 1093

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              ++    A +   RS+   D GD   +  D   +++L  N+  A    A +  S     
Sbjct: 1094 HPKY--IDAYI--KRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDIL 1149

Query: 278  KAEVILEKIWKVNP--HPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330
             A    E   ++NP  H      Y       L   +  G ++      +IN    E    
Sbjct: 1150 SAIADFENAIRLNPKYH----QAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNN 1205

Query: 331  VSKIALEMGSIDQAHAKAMLAMKIAP 356
                    G I  A      A++I P
Sbjct: 1206 RGFTKFRRGDIPGAMKDFEAAIQINP 1231



 Score = 44.2 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 8/148 (5%)

Query: 134  RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
               + A E  E  +QI              F   R GD+  A +    A+ I+P+     
Sbjct: 1180 GDISGAMENFEAAIQINPNYAEGHNNRG--FTKFRRGDIPGAMKDFEAAIQINPNYAEAY 1237

Query: 192  EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
              +        ++  A+    +  +   ++          R+L     GD   +  D  +
Sbjct: 1238 NNLGNSRFQTGDFQGAMRDFGETLRIHPKY----VPAYNNRALALLKLGDFSGATTDCYQ 1293

Query: 252  SLKLCDNSIMASICAAKSLISQNKKRKA 279
            +LK+     +A               +A
Sbjct: 1294 ALKINPKYGLAYYNLGLIHTEMGDLEQA 1321



 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 11/194 (5%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            GD   A +    A+ + P+                +   AI       +   ++++    
Sbjct: 1112 GDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDILSAIADFENAIRLNPKYHQ---- 1167

Query: 228  LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                  +    +GD+  +  +   ++++  N          +   +     A    E   
Sbjct: 1168 AYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIPGAMKDFEAAI 1227

Query: 288  KVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            ++N  P  A  Y +L      + +  G ++       I+ + V +    +   L++G   
Sbjct: 1228 QIN--PNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHPKYVPAYNNRALALLKLGDFS 1285

Query: 343  QAHAKAMLAMKIAP 356
             A      A+KI P
Sbjct: 1286 GATTDCYQALKINP 1299


>gi|205359552|ref|ZP_02830561.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205344384|gb|EDZ31148.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
          Length = 1150

 Score = 56.5 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAIAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|328770819|gb|EGF80860.1| hypothetical protein BATDEDRAFT_29905 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 925

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 103/300 (34%), Gaps = 40/300 (13%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           Q A  E + +   E LE +LQ      P      +     E    GD+ +A+   + A  
Sbjct: 561 QAAFFE-KAHGTRESLEELLQRAVRYCPQAEVLWLMG-AKEKWLSGDIEAAKSILSNAFA 618

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR-------SLE 235
            +P++  +  A ++  V   E+ RA   L   ++ A          ++ R       ++E
Sbjct: 619 ANPNSEQIWLAAIKLEVETGEYHRARVLLASARERADTERVWMKSAVLERQQGRFQDAIE 678

Query: 236 NADKG-----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             ++G                       D+  +  +  ++LK    S++  + A++    
Sbjct: 679 LLNQGIQKFPLFSKLWVIKGQILDEDLEDIENARDNYAQALKRIPKSVVLWLLASRLEEK 738

Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
                KA   LEK   +N   PE       +        + +AL L +  ++   S ++ 
Sbjct: 739 AGLPIKARATLEKARIMNAKVPEFWCEAIRVEVRAGNAPMAKAL-LAKSLQDCPTSGLLW 797

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           S+  L      +    A    K      +   +A++  A     DK   W   A+   PD
Sbjct: 798 SEAILMEARPQRKARSADALKKCENDPMVVATIARLFWAERK-LDKARNWFNRAVKTNPD 856


>gi|291569289|dbj|BAI91561.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1592

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 8/168 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A +  E +L+I  T       L   S R GD+ +A++  TKAL++ P+   V   +  
Sbjct: 37  DDARKACEQLLKIQPTSAVGFKILGDVSLRGGDIETAKQNYTKALELQPNWAEVYANLGS 96

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y  +++W +A     +      E+    A      +         + +     ++  L 
Sbjct: 97  LYARSQQWEQASAAYQKAISIKPEF----AGAYRNLAKVWTQLNRPLDAIRTQYKAYTLE 152

Query: 257 DNSIMASICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +  A    A    L+ Q    +A+   +    +N  P +A  Y +L
Sbjct: 153 PQTFSAQEHLALGDGLMQQGMATEAQACYQNAINLN--PSLAAAYQNL 198



 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 77/227 (33%), Gaps = 9/227 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            ++ A      +LQ+        Y +     +  +L+ A+    KAL++  +       +
Sbjct: 506 DFDGAIALYGQLLQLNPNWAAGYYQIGELRNQQWNLSEAEAAYRKALELDKNLAAAYYGL 565

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            +  +  + W+  I  L Q    A + +     L    +      G +  +     ++  
Sbjct: 566 GRVLLRQERWADVIPVLGQAM--ALDASGADFELCKGFADALVQTGQLDEAIAFYQKATD 623

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVG 309
           L  ++             +    +A    +K  +++P     H  +A++   L   +   
Sbjct: 624 LAADNAEVWQKLGDLWRDKQAFDQAIEAYQKANELDPNLFWSHNGLADVLFKLERWSEA- 682

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            ++   +   I  +   S   +++  +++    +A      A ++ P
Sbjct: 683 -VEVYQKAISIKSDYSWSYNSLAEALVKLERWSEATTAYGEAARLNP 728



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 17/181 (9%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P  P       + +   K+W +A++   +  +   + N   A  +   +L+    G+M 
Sbjct: 281 RPVNPETVLQEAKAFCAIKKWEQAVSACQKALR--LDRNLAEAYKIQGNALQML--GEME 336

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           A+     ++L++                 +++  KA    ++   +  +P  A  Y +L 
Sbjct: 337 AAVRSYNKALEVKPQFPEVHANLGSLYAQEDRLEKAVSCYQQA--IAQNPNFAGFYRNLA 394

Query: 304 SENTVGKLKR-------ALRLEEINKE--SVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               + +L R         +   +     + E  + +    L  G +DQA+     A+++
Sbjct: 395 K--VLERLGREGEASICLEKAYTLEPNKATPEDHLRLGNTRLGQGKLDQAYESYQRALEL 452

Query: 355 A 355
            
Sbjct: 453 N 453



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 74/262 (28%), Gaps = 41/262 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA--------VYSLYFESCRIGDLNSAQRYAT 178
               +   Q + A    +      AT   A        +  L+ +         A +   
Sbjct: 602 ADALVQTGQLDEAIAFYQK-----ATDLAADNAEVWQKLGDLWRDKQAFDQAIEAYQ--- 653

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           KA ++ P+  W    +       + WS A+    +      +++   +   +A +L   +
Sbjct: 654 KANELDPNLFWSHNGLADVLFKLERWSEAVEVYQKAISIKSDYS--WSYNSLAEALVKLE 711

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVI--------- 282
           +     +     E+ +L      +S    +  +            R A  +         
Sbjct: 712 RW--SEATTAYGEAARLNPEFPWSSYNLGEVSVRLQNWEEAVKGYRAAMAVQSDLPGIQQ 769

Query: 283 -LEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            L    +     ++      Y  ++ +     +    +  EI  +  E  V ++      
Sbjct: 770 KLADALRERAKGDLDEALGCYLQVMEQEP-DNVDTYHKAIEIKPDDSELYVKLADTLARQ 828

Query: 339 GSIDQAHAKAMLAMKIAPRKEI 360
             +D A     +A  + P    
Sbjct: 829 TQLDGAIVFYQMAQDLDPDNRA 850


>gi|194469945|ref|ZP_03075929.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205358577|ref|ZP_02657510.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194456309|gb|EDX45148.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205333258|gb|EDZ20022.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 1150

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|254785193|ref|YP_003072621.1| peptidase, M48 family [Teredinibacter turnerae T7901]
 gi|237686301|gb|ACR13565.1| peptidase, M48 family [Teredinibacter turnerae T7901]
          Length = 486

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYL----VYLLEVQIALA-ERQYNIAHEKLE-MMLQIP 150
           +H +  +R   + +  Q   +   L      L++ +  L  E+ +  A    E  M    
Sbjct: 246 SHPVTESRVTEARLRAQQYPNKPPLPVEEYDLIKARAYLLHEKNHQTAVNMFESEMRGTQ 305

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R  A Y L     R G+   A +     L   PD  +   A    Y  + +++ A   
Sbjct: 306 FDRVAARYGLVLALTRNGETERATQEIAPLLAQEPDNVYFQIAKADIYAESGDFAAARKV 365

Query: 211 LNQKKKNAKEWN 222
           L    K     +
Sbjct: 366 LEANLKKQPNSH 377


>gi|90413046|ref|ZP_01221043.1| putative N-acetylglucosaminyl transferase [Photobacterium profundum
           3TCK]
 gi|90325889|gb|EAS42335.1| putative N-acetylglucosaminyl transferase [Photobacterium profundum
           3TCK]
          Length = 323

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 103/305 (33%), Gaps = 29/305 (9%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +    G L+ A++   + LD  PD   
Sbjct: 17  GEVDRAIRIHQNLIARPNLTIDQRNLALQQLAKDYMAAGFLDRAEKIFEQLLD-EPDHRK 75

Query: 190 -VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYH 247
              + ++  Y   +EW +AI   +Q  K  K   ++  A      ++      +   +  
Sbjct: 76  GALQQLLSIYQQTREWEKAIEMASQLVKMGKPKLKHDIAHYWCELAMLEIGAQNQDKAKQ 135

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTH 301
              ++L    N + AS+  A+ LI   + + A   LE++      +     P +   Y  
Sbjct: 136 CLKKALSADKNCVRASLTMARILIKGGEYKAASKQLERVTEQEVDFVGEALPLLLQCYEA 195

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EI 360
             +E+  G LK      ++   S   L++  +I    G+I  A       +   P     
Sbjct: 196 TNNES--GWLKYLQHCVDMKAGSTAELMLADEIYKREGAI-LAQTFMTRQLTKNPTMKGF 252

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPD-----PLWISDDGYLSSV---WLPLSPIS 412
           + L+      +     +      S  H + +     P +       ++    W    P  
Sbjct: 253 YQLMDY--HLDEAEEGRAKESLTSLRHLVGEQLKMKPHYRCHKCGFATHSLYWQ--CPSC 308

Query: 413 KTLCY 417
           K    
Sbjct: 309 KGWGT 313


>gi|74318583|ref|YP_316323.1| putative porphyrin biosynthesis protein [Thiobacillus denitrificans
           ATCC 25259]
 gi|74058078|gb|AAZ98518.1| putative protein porphyrin biosynthesis [Thiobacillus denitrificans
           ATCC 25259]
          Length = 390

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 73/218 (33%), Gaps = 10/218 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-----QKKKNAK 219
               D  +A      A +I+P    +    ++   +  +W      L+        +   
Sbjct: 162 LETKDAAAALVAINHAKEIAPQHTALLRLELRARQMTGQWDEVDRLLDLLMRTNALEPGV 221

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                R            D   ++  +       K+      A+   A++ + +     A
Sbjct: 222 AAQNRRMAYAENLKRRAEDDRALLEYWKKVPSEFKVDPWVARAA---ARAFLQRGGDDTA 278

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +LE       + E+  +Y  L + +   +++RA +    +      L+ ++++     
Sbjct: 279 LDVLEAALDREWNEELVALYGELRASDPRRQIERAEKWLHAHPRDARLLLALAQLCSVQQ 338

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIE--QANSHNT 375
              +A +    ++ IAP  E  + +A+++     + + 
Sbjct: 339 LWGKAQSYLEASLAIAPTAEGHIRMAELKTQSGQTGDA 376


>gi|322613991|gb|EFY10927.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322625502|gb|EFY22328.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629967|gb|EFY26740.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632144|gb|EFY28895.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636506|gb|EFY33213.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643140|gb|EFY39714.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644639|gb|EFY41175.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651337|gb|EFY47721.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322652747|gb|EFY49086.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659048|gb|EFY55300.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663250|gb|EFY59454.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668736|gb|EFY64889.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674460|gb|EFY70553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678333|gb|EFY74394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682409|gb|EFY78430.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684123|gb|EFY80129.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192321|gb|EFZ77553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196251|gb|EFZ81403.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201399|gb|EFZ86465.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206491|gb|EFZ91452.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212083|gb|EFZ96910.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216988|gb|EGA01711.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220353|gb|EGA04807.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224400|gb|EGA08689.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228330|gb|EGA12461.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233403|gb|EGA17496.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237136|gb|EGA21203.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243649|gb|EGA27665.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246107|gb|EGA30094.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323250887|gb|EGA34765.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257620|gb|EGA41306.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261827|gb|EGA45394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266116|gb|EGA49607.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323268660|gb|EGA52127.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 1180

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109
           D  ++A   G+ ++ A                                     AR +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|16766902|ref|NP_462517.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161616676|ref|YP_001590641.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197261926|ref|ZP_03162000.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|238910356|ref|ZP_04654193.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|269849704|sp|Q8ZLB8|BCSC_SALTY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|16422179|gb|AAL22476.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|19171165|emb|CAC86196.1| putative cellulose synthase operon C protein [Salmonella
           typhimurium LT2]
 gi|161366040|gb|ABX69808.1| hypothetical protein SPAB_04493 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197240181|gb|EDY22801.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|261248769|emb|CBG26619.1| putative polysaccharide biosynthesis protein subunit C [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267995858|gb|ACY90743.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312914640|dbj|BAJ38614.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321226668|gb|EFX51718.1| Cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|332990467|gb|AEF09450.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 1180

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|326625359|gb|EGE31704.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 1143

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597


>gi|320088037|emb|CBY97799.1| Cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 1180

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAIAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|198241977|ref|YP_002217576.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197936493|gb|ACH73826.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 1180

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|205354768|ref|YP_002228569.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205274549|emb|CAR39597.1| putative polysaccharide biosynthesis protein subunit C [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326629909|gb|EGE36252.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 1161

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|194735245|ref|YP_002116553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194710747|gb|ACF89968.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
          Length = 1172

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109
           D  ++A   G+ ++ A                                     AR +  +
Sbjct: 282 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 341

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 342 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 401

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 402 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 461

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 462 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 521

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 522 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 581

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 582 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 626


>gi|238852700|ref|ZP_04643110.1| TPR repeat protein [Lactobacillus gasseri 202-4]
 gi|238834846|gb|EEQ27073.1| TPR repeat protein [Lactobacillus gasseri 202-4]
          Length = 419

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 18/257 (7%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A++
Sbjct: 62  FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 121

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIA 231
              +A  ++P+   +   + +   L+ ++  A+    +  K  K +       R    +A
Sbjct: 122 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGEVVLSQRIAACLA 181

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +  E  +  + I S+ + I S+        A   A   ++S    + A   L+++ +  P
Sbjct: 182 KLGEYEEAANEIKSHENYILSID-------ALYEAGLIMLSAGDNKAAIKYLDQVIETQP 234

Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A  
Sbjct: 235 DYVNAYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAER 292

Query: 347 KAMLAMKIAPRKEIFLL 363
                ++IAP      L
Sbjct: 293 LLKKGLEIAPDNSDLRL 309



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             I  AR+    +        E  +     ++      Y  A      + +   T     
Sbjct: 114 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 166

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211
           +     S RI    +      +A +            +A+ +     + A +   AI +L
Sbjct: 167 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENYILSIDALYEAGLIMLSAGDNKAAIKYL 226

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +Q  +   ++     +L  A + E+ ++ +++ +    +   +L +         AK+  
Sbjct: 227 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 282

Query: 272 SQNKKRKAEVILEKIWKVNP 291
           + N+  +AE +L+K  ++ P
Sbjct: 283 NLNQLDEAERLLKKGLEIAP 302


>gi|300361579|ref|ZP_07057756.1| tetratricopeptide repeat family protein [Lactobacillus gasseri
           JV-V03]
 gi|300354198|gb|EFJ70069.1| tetratricopeptide repeat family protein [Lactobacillus gasseri
           JV-V03]
          Length = 419

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 10/253 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A++
Sbjct: 62  FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 121

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  ++P+   +   + +   L+ ++  A+    +  K  K +     ++L  R   
Sbjct: 122 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGE---VVLSQRIAA 178

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              K        + I+S +    SI A   A   ++S    + A   L+++ +  P    
Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYLDQVIETQPDYVN 238

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A      
Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296

Query: 351 AMKIAPRKEIFLL 363
            ++IAP      L
Sbjct: 297 GLEIAPDNSDLRL 309



 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             I  AR+    +        E  +     ++      Y  A      + +   T     
Sbjct: 114 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 166

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211
           +     S RI    +      +A +            +A+ +     + A +   AI +L
Sbjct: 167 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYL 226

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +Q  +   ++     +L  A + E+ ++ +++ +    +   +L +         AK+  
Sbjct: 227 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 282

Query: 272 SQNKKRKAEVILEKIWKVNP 291
           + N+  +AE +L+K  ++ P
Sbjct: 283 NLNQLDEAERLLKKGLEIAP 302


>gi|195873799|ref|ZP_02698986.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195632376|gb|EDX50860.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 1180

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|161936207|ref|YP_152593.2| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
          Length = 1180

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|197364444|ref|YP_002144081.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56129775|gb|AAV79281.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095921|emb|CAR61500.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 1143

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597


>gi|254515150|ref|ZP_05127211.1| TPR domain protein [gamma proteobacterium NOR5-3]
 gi|219677393|gb|EED33758.1| TPR domain protein [gamma proteobacterium NOR5-3]
          Length = 402

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 109/340 (32%), Gaps = 46/340 (13%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL-EMMLQIPATRE 154
             +  A ++H  +  +       +   +L   +  ++    + A + L ++M +    R+
Sbjct: 83  GEVDRAIRIHQNLLARPNLPRTQMHIAHLELARDYISAGLLDRAEKLLLDLMAESEEQRD 142

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +   L        +   A     +A  + P       ++++    A             
Sbjct: 143 VSRQYLVEIYRSESEWERAI---EEARALLPR-----RSLLRGETQA------------P 182

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           + + +      A      +LE A++G    +     ++L++      AS+   +   +  
Sbjct: 183 QLSGQPMAVQLAHFYCESALELAEEGKPDEARKQLQQALRIDPACARASLELGRFEGTAG 242

Query: 275 KKRKAEVILEKIWKVNPH--------PEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
             R A   L ++  V  H        P +   Y  L  E  +      + L     E   
Sbjct: 243 NHRLAIDALTRV--VEQHVEFLPEAIPALRECYAALGEEKALS-----VYLRRCLDEHPS 295

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQ----ANSHNTDKILY 380
           + ++++             A   LA ++  AP     L L +++Q      S ++  +L 
Sbjct: 296 TPLMIAVADDIHRDEGHEAAHEFLAERLAQAPSLRGLLRLIRMQQEDTPGVSGDSLSMLS 355

Query: 381 WTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKTLCYFE 419
                L  +  P +  D  G+ +   L   P  K    F 
Sbjct: 356 VLLHRLIEVR-PAYRCDHCGFSARHLLWFCPGCKYWGTFR 394


>gi|149177100|ref|ZP_01855707.1| O-GlcNAc transferase [Planctomyces maris DSM 8797]
 gi|148843992|gb|EDL58348.1| O-GlcNAc transferase [Planctomyces maris DSM 8797]
          Length = 665

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 60/205 (29%), Gaps = 43/205 (20%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
             A      A       LQ       A++ L   + +  +   A RY   AL  +PDAP 
Sbjct: 442 YEAREDNKKAFNHYFQSLQAKPQNADALFGLGNLARKQKNYEEALRYYQLALKFNPDAPG 501

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA---------------KEWNRNRAILLIARSL 234
           + E +   Y+   + + A    +  +K                 K  +  +AI     +L
Sbjct: 502 IRETLGNLYLELGDMTNAQHQFDLSRKQGLLDPANEFNLGLMAAKNADLQKAIKHYESAL 561

Query: 235 ENADKGDMIASYHDAIE----------------------------SLKLCDNSIMASICA 266
           +  D       +   I+                            ++K   +   A    
Sbjct: 562 QILDSTKKPDLHRQVIQELTFTYNMRGTTLQKKQDHEQAEYYFRLAMKTSPDFAPAYFNL 621

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
            +SL    K + A  +L+    + P
Sbjct: 622 GESLYRLGKTQAAISVLQTALTLVP 646


>gi|83646050|ref|YP_434485.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83634093|gb|ABC30060.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 605

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 81/264 (30%), Gaps = 11/264 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           V L   +  +   +   A + L  ++ + +     +  L           +A     KAL
Sbjct: 188 VKLNLAEQYVRNGESGKAIKLLSPVIDVSSDNAVGLVLLANAYVASQSPEAAIPLFQKAL 247

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            +SP  P    A+      A +   ++   NQ  K   +W     +    R+L  A K D
Sbjct: 248 KLSPQQPAPLLALGIAQRDADQLDNSLNSFNQLLKLKPDW----GLAYFQRALTYAKKDD 303

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIA 296
              +  D   +LK        ++ A        K   AE + + + K +  P      + 
Sbjct: 304 HDKAVSDYQSALKDKALPENLAVQAGDYFAQSGKHELAESVYKDLMKRSETPFPYYQRLG 363

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++Y   L  +          L +   ++ +S +              A       +K+AP
Sbjct: 364 SLYQ--LQNDASKAKAVYSDLLKTYPDNPQSYLYAGSFHAFTRDYAAAADLFEKGLKLAP 421

Query: 357 RKEIFLLLAQIEQANSHNTDKILY 380
                 +   +        DK   
Sbjct: 422 DSSSLRMAKAVALKQLGTLDKAQQ 445


>gi|87311142|ref|ZP_01093266.1| hypothetical protein DSM3645_19021 [Blastopirellula marina DSM
           3645]
 gi|87286233|gb|EAQ78143.1| hypothetical protein DSM3645_19021 [Blastopirellula marina DSM
           3645]
          Length = 946

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 24/252 (9%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA----L 181
                L  +  + A +  E  +++  +    +Y +      IGD     +   +A     
Sbjct: 704 AAYAYLQRKSNSSARKFAEKAIELDPSHPLGLYVMARLFLSIGDAQETLKLLEQATGDRF 763

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           D  P A           +  K++  AI    +  K         A L+    L+  D  D
Sbjct: 764 DRRPVALLA-----GLRLKQKDYQSAIELYERGAKAEPASEEWTAALVRVHLLQKDD--D 816

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
            +      + + K  D  +      A  L +++  R A    E+ +++    ++A+   H
Sbjct: 817 ALLKLLPILAAQKHHD--VAIRKKLATLLAARDDWRGAARWSEEAFQI----DVADAQAH 870

Query: 302 LLSENTVG----KLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            ++          L  A  L     ++ + V+  +  ++  + +     A       +K 
Sbjct: 871 EINGRAEQELDHPLAAARELAVAFRLSPDRVDWGIAAAEALIAVSDEAAAREILEAVLKH 930

Query: 355 APRKEIFLLLAQ 366
           +P       L +
Sbjct: 931 SPSSAAAQQLLE 942



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 43/224 (19%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFAV 157
           ARK      +    H   L   +  ++ L+        + LE          P      +
Sbjct: 717 ARKFAEKAIELDPSH--PLGLYVMARLFLSIGDAQETLKLLEQATGDRFDRRPVALLAGL 774

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKK 215
                   +  D  SA     +     P +   T A+V+ ++L K+    +  L     +
Sbjct: 775 R------LKQKDYQSAIELYERGAKAEPASEEWTAALVRVHLLQKDDDALLKLLPILAAQ 828

Query: 216 KNAKEWNRNRAILLIAR----------------------------SLENADKGDMIASYH 247
           K+     R +   L+A                                  +    +A+  
Sbjct: 829 KHHDVAIRKKLATLLAARDDWRGAARWSEEAFQIDVADAQAHEINGRAEQELDHPLAAAR 888

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +   + +L  + +   I AA++LI+ + +  A  ILE + K +P
Sbjct: 889 ELAVAFRLSPDRVDWGIAAAEALIAVSDEAAAREILEAVLKHSP 932



 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 2/102 (1%)

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             Y +L  ++     K A +  E++      L +++++ L +G   +       A     
Sbjct: 704 AAYAYLQRKSNSSARKFAEKAIELDPSHPLGLYVMARLFLSIGDAQETLKLLEQATGDRF 763

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPLWISD 397
            +    LLA + +    +    +   +    A      W + 
Sbjct: 764 DRRPVALLAGL-RLKQKDYQSAIELYERGAKAEPASEEWTAA 804


>gi|300865169|ref|ZP_07109993.1| hypothetical protein OSCI_1490029 [Oscillatoria sp. PCC 6506]
 gi|300336859|emb|CBN55143.1| hypothetical protein OSCI_1490029 [Oscillatoria sp. PCC 6506]
          Length = 313

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 78/242 (32%), Gaps = 36/242 (14%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E L  L + ++ L E + + A    +  LQ       A   L       G L  A+++  
Sbjct: 6   EVLDLLRQAEVDLNEGKLDRAIASCKQALQNEPNSATACKILGKALQTQGQLEEAKQWYA 65

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           KA+ + P+   V   +   Y   ++W  AI    Q      ++    A +    +     
Sbjct: 66  KAIALDPNLADVHANLGSLYANLEQWPEAIASYQQALTLQPKF----AGVYRNLARLFEQ 121

Query: 239 KGDMIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            G           +L L  +    + +  A SL++QNK  +A                  
Sbjct: 122 IGKPEEGADFWYIALMLEPDFTGETFLHVASSLMAQNKVERAV----------------I 165

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y   +                +N    E+   +++I   +   D A A    A+++ P 
Sbjct: 166 CYLRTI---------------YLNPSCYEAYYKLAEIETSLEQWDDAIAHYRKAIQLQPD 210

Query: 358 KE 359
             
Sbjct: 211 IS 212


>gi|227823339|ref|YP_002827311.1| adenylate cyclase 3 [Sinorhizobium fredii NGR234]
 gi|227342340|gb|ACP26558.1| adenylate cyclase 3 [Sinorhizobium fredii NGR234]
          Length = 635

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 80/225 (35%), Gaps = 17/225 (7%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAKEWNRNRAILL 229
           A+R   KA+++  +       + +     ++W      +  +      A   + N A   
Sbjct: 368 ARRMFLKAVELDANYARAYAGIAECECAIRDWHEKDFPLESIFDMSAKALALDPNLAEAH 427

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            +R L     G    +  +  ++L L  +   A++   + L +Q + ++A    ++  ++
Sbjct: 428 ASRGLALTHNGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQGRFQEAVQFFKRAAEI 487

Query: 290 NP-------HPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALE 337
            P       H  + N Y  L  ++   +     ++RA    E + E+       +     
Sbjct: 488 RPDDYFSPIH--LLNCYLSLGVDSERQRWARIGIERAKAALERHPENASPAHRGALALAH 545

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
           +G  D+A   A  A+ I P   +    A    +     ++ L   
Sbjct: 546 LGEGDRAKEWAARALAIDPDDIVAQYNAACVHSLLGENERALDLL 590



 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 13/162 (8%)

Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             Q   A  +    +   P+  E  +Y   +  +   G    A ++  +A +I PD  + 
Sbjct: 437 NGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQ--GRFQEAVQFFKRAAEIRPDDYFS 494

Query: 191 TEAVVQQY------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
              ++  Y         + W  A   + +  K A E +   A      +L  A  G+   
Sbjct: 495 PIHLLNCYLSLGVDSERQRW--ARIGIERA-KAALERHPENASPAHRGALALAHLGEGDR 551

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +   A  +L +  + I+A   AA       +  +A  +LE +
Sbjct: 552 AKEWAARALAIDPDDIVAQYNAACVHSLLGENERALDLLEAV 593


>gi|322419884|ref|YP_004199107.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320126271|gb|ADW13831.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 263

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 63/200 (31%), Gaps = 12/200 (6%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY  L        A  +  A        +      + L  L    +     ++  A    
Sbjct: 41  GYFYLGEAY--SEAGQVDDAIAALKKGLELAPQDVDGLTAL--GDVYFESGKHKDALACY 96

Query: 144 EMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             M ++            L + +    D   A +    AL++ P   +   A+   Y   
Sbjct: 97  RKMTELQPKDCDGYVSMGLVYNAMERTDD--ALKAFEMALELDPANVFALNAMGDLYYGL 154

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +  +AI   ++      E +   A           D  D+ A+  + +E+++L  +  M
Sbjct: 155 GDNEKAIAAYHK----GIEIDPTDATARFNLGELYYDMDDLEAAERETLEAIRLDPDFTM 210

Query: 262 ASICAAKSLISQNKKRKAEV 281
           + +      I Q++  +A  
Sbjct: 211 SYLTLGNICIDQDRTAEAIK 230


>gi|320352459|ref|YP_004193798.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 758

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREF 155
                A+K     +       ++   L   +  L  ++Y  A +    +           
Sbjct: 420 GEFETAKK--EAATALKINPRDFQAALTLAKGVLFSKEYETAEKMFSELHAKVPDNVEVL 477

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               L + + +      A++   K L + PD       ++Q    +     A+  + Q +
Sbjct: 478 GSLGLTYLAMKQEA--KAKQTFEKLLAVQPDNAKAFSFLLQLAQKSGAQKEALIKMTQAQ 535

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +        A L I  +           +     ++ +L  ++      +A  L  Q K
Sbjct: 536 IDKAP---KSAGLQILLANLFLSAQQPDKALELYSKAQELDPDNPQPYAMSALILTRQGK 592

Query: 276 KRKAEV 281
             +A  
Sbjct: 593 TDQAIA 598



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 71/189 (37%), Gaps = 7/189 (3%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              AQ++  + L  +PD            ++  ++  AI  +++    A   +R  AI  
Sbjct: 116 KEDAQKHIDEVLVQAPDNKDALALQANLELVDGKFDAAIATVDKAIAGAPNEDRFYAI-- 173

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             +    + K    A+ +  +++L+L    +      A   + + +  KA+  LEK+   
Sbjct: 174 --KGRALSAKQQFPAAENAFLKALELDGKKLANHATLAAFYVERKELSKAKASLEKMAAA 231

Query: 290 NP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            P    P +      L+  N     +   +  +++ ++ +    ++    + G  +QA  
Sbjct: 232 FPDSSQPYLQMASIELMENNPDAAEQHLTQALKVDPKNSKLKTAIADFYSKKGKFEQAEQ 291

Query: 347 KAMLAMKIA 355
               A++  
Sbjct: 292 LYKEAIQDT 300


>gi|282852067|ref|ZP_06261425.1| tetratricopeptide repeat protein [Lactobacillus gasseri 224-1]
 gi|311110807|ref|ZP_07712204.1| putative O-linked transferase [Lactobacillus gasseri MV-22]
 gi|282556827|gb|EFB62431.1| tetratricopeptide repeat protein [Lactobacillus gasseri 224-1]
 gi|311065961|gb|EFQ46301.1| putative O-linked transferase [Lactobacillus gasseri MV-22]
          Length = 419

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 10/253 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F  E L  +   +I L +   +   + L  +         ++  L       G + +A++
Sbjct: 62  FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 121

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  ++P+   +   + +   L+ ++  A+    +  K  K +     ++L  R   
Sbjct: 122 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGE---VVLSQRIAA 178

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              K        + I+S +    SI A   A   ++S    + A   L+++ +  P    
Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYLDQVIETQPDYVN 238

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +P +A  Y     +N    L+ A      N+       + +K A  +  +D+A      
Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296

Query: 351 AMKIAPRKEIFLL 363
            ++IAP      L
Sbjct: 297 GLEIAPDNSDLRL 309



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             I  AR+    +        E  +     ++      Y  A      + +   T     
Sbjct: 114 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 166

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211
           +     S RI    +      +A +            +A+ +     + A +   AI +L
Sbjct: 167 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYL 226

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +Q  +   ++     +L  A + E+ ++ +++ +    +   +L +         AK+  
Sbjct: 227 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 282

Query: 272 SQNKKRKAEVILEKIWKVNP 291
           + N+  +AE +L+K  ++ P
Sbjct: 283 NLNQLDEAERLLKKGLEIAP 302


>gi|294788409|ref|ZP_06753652.1| tetratricopeptide repeat protein [Simonsiella muelleri ATCC 29453]
 gi|294483840|gb|EFG31524.1| tetratricopeptide repeat protein [Simonsiella muelleri ATCC 29453]
          Length = 389

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/344 (12%), Positives = 103/344 (29%), Gaps = 43/344 (12%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR +   + QQ   ++  L      ++     + + A    + +L  P T       
Sbjct: 57  GKAARNLAEVIDQQQGSYDLNLTL---GKLYRQRGENDKAIAMHKTLLNSPDT--VGEKH 111

Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              +Y L       G ++ A++   + L     A    E ++  Y   ++W +AI     
Sbjct: 112 ERVLYELGLNYQSAGLVDRAEQIFIE-LQKGNMAKQANEVLLNIYQQDRDWEKAIATAQL 170

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
              + + +    A      +     +     +      +L        A++        Q
Sbjct: 171 LSHDNQTYQFEIAQFYCEMAQAVLFQSHFDEAREYVQAALNANPKCTRANMILGDIEQKQ 230

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKR----ALRLEEINKESVE 326
                A      I K N      + Y  ++ E   +    + +       L    K    
Sbjct: 231 GNFGAAIAAYSAIEKQN------HAYLSMVGERLYDAYDAMSKPEDGLNVLIGYAKTFPA 284

Query: 327 SLV--IVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQANSHNTDKIL 379
             +  ++ + +L +   ++A+  A+  +++ P    ++ L    ++ +      + D + 
Sbjct: 285 LDLINVIYEKSLLLHGEEKANQIAVELVRLKPDLNGMYRLLGLQMSDLNPQWKADADMMR 344

Query: 380 YWTQSALHAMPDPLWI--SDDGYLSSV---WLPLSPISKTLCYF 418
                 L       W+    + +  S    W    P       F
Sbjct: 345 GVMGRQLQ----KSWMFRCRNCHFKSQVYFWH--CPACNKWETF 382


>gi|330965739|gb|EGH65999.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 1298

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 79/250 (31%), Gaps = 51/250 (20%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221
           + G L++AQ    + L      P     ++       +   A+  L+     ++    + 
Sbjct: 399 QAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQAKLGDS 458

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R +A+     +     +GD+ A+     +++K   +++      A+  +  ++  KA  
Sbjct: 459 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 518

Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302
           +++++ K  P                                   P++  +   +     
Sbjct: 519 LIDELLKAQPNDIDALYTGALLSVEMGQWQDAQTTFARIPVDQRTPDMKALADEITMTVQ 578

Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                           L    RL+ +   S E  + ++   ++ G   +    A  A+  
Sbjct: 579 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGEPARGRDMARAAIAQ 638

Query: 355 APRKEIFLLL 364
           AP     L+L
Sbjct: 639 APVPSADLML 648


>gi|257457422|ref|ZP_05622592.1| putative TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257445151|gb|EEV20224.1| putative TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 1044

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 92/327 (28%), Gaps = 60/327 (18%)

Query: 98  HNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATR 153
            N   A    S        H    + L  L      +     + A E  +  +   P   
Sbjct: 126 GNYDEAADYFSRAIEVKPDHAHAYDRLGNL-----YVLTGDTDKAIEVYKQGLRVDPNHP 180

Query: 154 EFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               +   L  +  R      A  Y   AL I+P   W  E ++       +  +    L
Sbjct: 181 YLNFHLAGLLRQEKR---YEEAIVYYNSALRINP--AW-GEVLLGIAAAYLQLDKLDDAL 234

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           N   ++        A +          K  +  +     ++L +      A++   + L 
Sbjct: 235 NT-YRSLLRVTGENAPIYTELGYLFEKKQLLQEAEQYYYDALAIDFGFAPAALALTRLLE 293

Query: 272 SQNKKRKAEVILEKIWKVNP-----H-------------PEIANIY-----THLLSENTV 308
           ++ +  +A  IL    +  P     H              + A  Y           N++
Sbjct: 294 NKQQYNEALPILLAA-ETAPVNADNHALRLKAIQMCMYAKDYAKAYEIFGRLDAEHSNSL 352

Query: 309 GKLKRALRLEEI-----------------NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             LK   +L  +                    ++E    +++  L     ++A  +  L 
Sbjct: 353 SALKLRGQLYALTGESEQAEETFKQILKIAPAAIEFRQELAEQYLLAHKYEEAKEQLNLF 412

Query: 352 MKIAPR-KEIFLLLAQIEQANSHNTDK 377
           +K  P      + L + E+  ++    
Sbjct: 413 LKQRPTDISALMALGRTEELLNNPQAA 439



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 7/192 (3%)

Query: 90  TGLMSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             L++    +   L R + +Y+       +   + L   +I     +Y+ A E L+    
Sbjct: 47  ESLLARIYGDEGDLERSLAAYLRLYEREPDNVDLMLSLGRIYRHLGRYDAALEILKKAED 106

Query: 149 IP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           I   T E  +Y++     R+G+ + A  Y ++A+++ PD     + +   YVL  +  +A
Sbjct: 107 IGGDTDEI-LYNIAKTYKRMGNYDEAADYFSRAIEVKPDHAHAYDRLGNLYVLTGDTDKA 165

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I       K     + N   L    +     +     +      +L++        +  A
Sbjct: 166 IEV----YKQGLRVDPNHPYLNFHLAGLLRQEKRYEEAIVYYNSALRINPAWGEVLLGIA 221

Query: 268 KSLISQNKKRKA 279
            + +  +K   A
Sbjct: 222 AAYLQLDKLDDA 233



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 60/179 (33%), Gaps = 13/179 (7%)

Query: 188 PWVTEAVVQQYVLA---KEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMI 243
               + + ++   A   +++  A   L    K +      ++  +    +    D+GD+ 
Sbjct: 2   SESLDFIFERANSALITQDFEYAEQLLTNVLKKHPDILPNDKTKIESLLARIYGDEGDLE 61

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANI 298
            S    +   +   +++   +   +      +   A  IL+K   +    +     IA  
Sbjct: 62  RSLAAYLRLYEREPDNVDLMLSLGRIYRHLGRYDAALEILKKAEDIGGDTDEILYNIAKT 121

Query: 299 YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           Y  + + +       RA    E+  +   +   +  + +  G  D+A       +++ P
Sbjct: 122 YKRMGNYDEAADYFSRA---IEVKPDHAHAYDRLGNLYVLTGDTDKAIEVYKQGLRVDP 177


>gi|158522482|ref|YP_001530352.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511308|gb|ABW68275.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 643

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/371 (12%), Positives = 104/371 (28%), Gaps = 50/371 (13%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-----WI 56
            ++    F++  V    +  +       + W        P   ++ +     A       
Sbjct: 297 WKVAGAVFLLLAVTVGALRAAKTHRFFIVGWLWFAGMMVPLSGIAQIGTQAMADHYMYLP 356

Query: 57  LLFAVSRFFLSCPAMLFHMLHKR----NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112
           ++  +        A++ +  HK            AL+TGL +        +  + ++   
Sbjct: 357 MIGLLIAVVWGADAVMGNWKHKAAASWTATVVVLALFTGLSARQVGVWKNSFTLLNHALA 416

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLN 171
               + E   +L   Q          A     + +   P     + ++L     R G+L 
Sbjct: 417 VTKNNYEAHNHL--GQAFAEAGDNQNAIGHFIQALAIRPD-HAKSHHNLANVYVRTGNLE 473

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A+ +  +AL   P+      ++           +AI    +    A ++      L  A
Sbjct: 474 KAEHHYQQALVADPENAATFNSLGLVQAAQGRLHKAIASYQKALALAPDFAHAHHNLARA 533

Query: 232 RS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            +  +  ++ ++      AI       +     +  A+ L  +N+  +A           
Sbjct: 534 MAVSDRLEEAEVHYQRALAIN-----PDMAGTRLQLAEILTLKNRPAEAAR--------- 579

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                                     L      S +   +  +   E G   +A      
Sbjct: 580 ----------------------HYEILTGQAPASADLNYLAGRAFYESGQTAKARPYLEQ 617

Query: 351 AMKIAPRKEIF 361
           A+ I P+ +  
Sbjct: 618 ALAINPQMKAA 628



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 63/228 (27%), Gaps = 35/228 (15%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L       GD  +A  +  +AL I PD       +   YV      +A     Q     
Sbjct: 427 HLGQAFAEAGDNQNAIGHFIQALAIRPDHAKSHHNLANVYVRTGNLEKAEHHYQQALVAD 486

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E     A    +  L  A +G +  +     ++L L  +                    
Sbjct: 487 PE----NAATFNSLGLVQAAQGRLHKAIASYQKALALAPDF------------------- 523

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
                      + H  +A      +S+          R   IN +   + + +++I    
Sbjct: 524 ----------AHAHHNLARAMA--VSDRLEEAEVHYQRALAINPDMAGTRLQLAEILTLK 571

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
               +A     +    AP       LA      S  T K   + + AL
Sbjct: 572 NRPAEAARHYEILTGQAPASADLNYLAGRAFYESGQTAKARPYLEQAL 619


>gi|332232577|ref|XP_003265482.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           [Nomascus leucogenys]
          Length = 898

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 90/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 506 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 562

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 563 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 622

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 623 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 682

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 683 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 738

Query: 331 VSKIALEMGSIDQAHAKAML-AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A        ++     E + LL+ I      N DK L     AL   
Sbjct: 739 LAQVLAVMGQTKEAEKMTNHIVLEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 797

Query: 389 MPDP 392
             DP
Sbjct: 798 PKDP 801



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 94/283 (33%), Gaps = 37/283 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 639 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 696

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT- 209
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 697 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKM 755

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
             +   +        R +  I    EN DK     +     ++L+L        I  ++ 
Sbjct: 756 TNHIVLEETGCLECYRLLSAIYSKQENHDK-----ALDAIDKALQLKPK-DPKVI--SEL 807

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
             ++  + + + +L+K ++                              ++N +  ++ +
Sbjct: 808 FFTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWM 843

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
            +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 844 NMGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 886


>gi|205356887|ref|ZP_02342915.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205325790|gb|EDZ13629.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 1180

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 89/295 (30%), Gaps = 28/295 (9%)

Query: 100 IPLARKMHSYVSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEM 145
              AR +  +        +       E L+      LL  Q   AL       A    + 
Sbjct: 340 GDRARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQ 399

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              +  T  +AV  L   +    D  +A+RY  + L +          +   Y       
Sbjct: 400 ARAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSGNSNAVRGLANLYRQQSPQK 459

Query: 206 RA--ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            A  I  L+  ++ + +          L  ++     +G    +       L L   S+ 
Sbjct: 460 AAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW 519

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL- 317
            +   ++ L    +  +A+  +  + +  P+ PE    Y   LS +   +  L     L 
Sbjct: 520 VTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLP 579

Query: 318 -EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
             + N    E    +    V + A  +    +      L  +  P   I L LA 
Sbjct: 580 TSQWNSNIQELAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|307169156|gb|EFN61972.1| Pre-mRNA-processing factor 6 [Camponotus floridanus]
          Length = 929

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 41/257 (15%)

Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           +     E LE +LQ      P +    +          GD+ +A+   + A   +P++  
Sbjct: 572 KTYGTRESLEALLQRAVAHCPKSEVLWLMG-AKSKWLAGDVPAARGILSLAFQANPNSEE 630

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLE 235
           +  A V+      E+ RA   L + + +A                     A+ L+  +L+
Sbjct: 631 IWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAALRLLKEALD 690

Query: 236 NADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             D                G +  +     +++K C NSI      A+    +N+  KA 
Sbjct: 691 AFDDFPKLWLMKGQIEEQQGYLDKAIETYNQAIKKCPNSIPLWRLLAQLEHRKNQVTKAR 750

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKR--ALRLEEIN-KESVESLVIVSKIALE 337
            +LEK    N  P+ A ++   +         R  A  L     +E   S ++ ++ A+ 
Sbjct: 751 SVLEKARLKN--PKNAELWLEAVRNELKSGGARDMANTLMAKALQECPTSGLLWAE-AIF 807

Query: 338 MGSIDQAHAKAMLAMKI 354
           M    Q   K++ A+K 
Sbjct: 808 MEPRPQRKTKSVDALKK 824



 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +          
Sbjct: 275 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 333

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     +S++    S+   I AA   +    KR    +  K 
Sbjct: 334 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLEMEVKAKR---RVYRKA 383

Query: 287 WKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SV+  + ++++     + D A
Sbjct: 384 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 436

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 437 RKVLNKARENIPTDRQIWTTAAKLEEANGN 466



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           + N  S E  +   K+  E    ++A      A   AP   + +  A++E A ++    +
Sbjct: 623 QANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAAL 682

Query: 379 LYWTQSALHA 388
               + AL A
Sbjct: 683 RL-LKEALDA 691


>gi|320164342|gb|EFW41241.1| pre-mRNA splicing factor [Capsaspora owczarzaki ATCC 30864]
          Length = 916

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 106/273 (38%), Gaps = 35/273 (12%)

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P   E  +     E  R G++  +++    A + +P++  +  A V+      E++RA  
Sbjct: 583 PQAEELWLMG-AKEQWRAGNIEQSKQILMYAFNANPNSEEIWLAAVKLESETSEFARARA 641

Query: 210 FLNQKKKNAKEWNRN--------------RAILLIARSLENA---------------DKG 240
            L++ + NA                    RA  L+A  ++                  +G
Sbjct: 642 LLDRARANAPTARVWMKSAKLEWQLNELERAKTLLAEGVQLFPEFDKLHMMRGQILMQQG 701

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY 299
           D   +     E ++ C +SI   + AA+         KA  ILE+  +K   +  +    
Sbjct: 702 DENGAREAYKEGIRRCTSSIPLWLLAARLEEQTGNLTKARGILERARFKNQKNDTLWLEA 761

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK- 358
             + + +      +AL  + +  E   S +++++ A+ M  +    AK++ A++      
Sbjct: 762 VRVETRSGNAAAAQALMAKAMQ-ECPTSGLLLAE-AIFMEPVPLRRAKSLTAVQRNEDSP 819

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            + + +A++  A     +K   W + A+ A PD
Sbjct: 820 HVLVAVAKLLWAERK-VEKAAEWFRRAIGADPD 851



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 36/205 (17%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +A E   ++  L  + +L     G     +    ++++ C  +    +  AK        
Sbjct: 543 HALEKFSSKQSLWKSAALLEKQHGTPATVHAVLEKAVRYCPQAEELWLMGAKEQWRAGNI 602

Query: 277 RKAEVILEKIWKVNPHP-EIANIYTHLLSENT--------VGK----------------- 310
            +++ IL   +  NP+  EI      L SE +        + +                 
Sbjct: 603 EQSKQILMYAFNANPNSEEIWLAAVKLESETSEFARARALLDRARANAPTARVWMKSAKL 662

Query: 311 ------LKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                 L+RA  L     ++  E  +  ++  +I ++ G  + A       ++       
Sbjct: 663 EWQLNELERAKTLLAEGVQLFPEFDKLHMMRGQILMQQGDENGAREAYKEGIRRCTSSIP 722

Query: 361 FLLLAQIEQANSHNTDKILYWTQSA 385
             LLA   +  + N  K     + A
Sbjct: 723 LWLLAARLEEQTGNLTKARGILERA 747


>gi|224585412|ref|YP_002639211.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224469940|gb|ACN47770.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 1150

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 89/295 (30%), Gaps = 28/295 (9%)

Query: 100 IPLARKMHSYVSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEM 145
              AR +  +        +       E L+      LL  Q   AL       A    + 
Sbjct: 310 GDRARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQ 369

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              +  T  +AV  L   +    D  +A+RY  + L +          +   Y       
Sbjct: 370 ARAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQK 429

Query: 206 RA--ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            A  I  L+  ++ + +          L  ++     +G    +       L L   S+ 
Sbjct: 430 AAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW 489

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL- 317
            +   ++ L    +  +A+  +  + +  P+ PE    Y   LS +   +  L     L 
Sbjct: 490 VTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLP 549

Query: 318 -EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
             + N    E    +    V + A  +    +      L  +  P   I L LA 
Sbjct: 550 TSQWNSNIQELAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604


>gi|194444308|ref|YP_002042863.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194402971|gb|ACF63193.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 1180

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 97/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIERSLENYRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ P     Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPGQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|325525730|gb|EGD03477.1| HemY domain-containing protein [Burkholderia sp. TJI49]
          Length = 395

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/399 (13%), Positives = 123/399 (30%), Gaps = 25/399 (6%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  ++  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAILFAIAVALATVGRFDAGQVLLVYPPYRVDVSLNLFVIAVVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K            N+ 
Sbjct: 63  IVRNIWRMPQRVAAYRARARNEKAQASLRDAIANLYAGRFSRAEKAAREALAVDA--NQG 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYA 177
              L+    A    +Y    +     +  P     R  A      +             A
Sbjct: 121 AASLVGATAAHRMHEYTR-RDDWLSKVDAPEWQDARLLAA----ADMRADARDADGALAA 175

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
              L          +  ++     K W+  +  L +  +  +  +   A+ L  ++ EN 
Sbjct: 176 LADLQAGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENL 234

Query: 238 ---DKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               + D  A          + +        +  AA  L+   ++ +A  I+E+    N 
Sbjct: 235 LRERRHDPDALLEVWQSLSPAERQSPRL---ADLAADLLVPLERRTEARRIVEEALAHNW 291

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +   Y      + +  +++A   ++ + E  + L  + ++  +     +A +    A
Sbjct: 292 DARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLEAA 351

Query: 352 MKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +K+A  +         LA++ +          ++ +SAL
Sbjct: 352 LKLADNEALKVRTHRALARLFEHLGETDKAAKHYRESAL 390


>gi|62182120|ref|YP_218537.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62129753|gb|AAX67456.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322716609|gb|EFZ08180.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 1180

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 89/295 (30%), Gaps = 28/295 (9%)

Query: 100 IPLARKMHSYVSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEM 145
              AR +  +        +       E L+      LL  Q   AL       A    + 
Sbjct: 340 GDRARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQ 399

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              +  T  +AV  L   +    D  +A+RY  + L +          +   Y       
Sbjct: 400 ARAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQK 459

Query: 206 RA--ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            A  I  L+  ++ + +          L  ++     +G    +       L L   S+ 
Sbjct: 460 AAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW 519

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL- 317
            +   ++ L    +  +A+  +  + +  P+ PE    Y   LS +   +  L     L 
Sbjct: 520 VTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLP 579

Query: 318 -EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
             + N    E    +    V + A  +    +      L  +  P   I L LA 
Sbjct: 580 TSQWNSNIQELAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|15839026|ref|NP_299714.1| tetratricopeptide repeat protein [Xylella fastidiosa 9a5c]
 gi|9107626|gb|AAF85234.1|AE004052_9 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 398

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/389 (13%), Positives = 113/389 (29%), Gaps = 44/389 (11%)

Query: 60  AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107
               F     A L   +  R      G+  +         GL  + +     A ++    
Sbjct: 13  WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 72

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163
           + + ++       L +L   +      + + A    + +L+ P      + FA+ +L  +
Sbjct: 73  AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLLKRPDLTDHQKVFALLALGED 127

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222
             + G L+ A+   T+   I   AP     ++  Y   ++W +AI   +  +    +   
Sbjct: 128 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVATGEPMG 187

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +  A      +           +      + +    S+ A I   +          A   
Sbjct: 188 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRAGIIEGRIEADLGHHEAAVRA 247

Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333
            E+  + +P       P +   Y  +        +  A        E    +   + +++
Sbjct: 248 WERAARHDPEYLPEIIPALLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 301

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391
           +        QA       +K  P       L  +  A+  +    LY  +     +   +
Sbjct: 302 LIESQEGPAQARGYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 361

Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417
           P +       G  +  W    P  K    
Sbjct: 362 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 388


>gi|114777718|ref|ZP_01452678.1| heat shock protein [Mariprofundus ferrooxydans PV-1]
 gi|114551934|gb|EAU54468.1| heat shock protein [Mariprofundus ferrooxydans PV-1]
          Length = 380

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 103/296 (34%), Gaps = 20/296 (6%)

Query: 134 RQYNIAHEKLEMMLQIPA----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L  P         A  +L  +    G L+ A     KAL+I  D   
Sbjct: 86  GEIGRAVRIHQNLLARPDLAKSIHLQAHMALARDFQTGGLLDRALIQYGKALEIQSDHAG 145

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             EA ++    + EW  A   L++ ++   + ++ +RA L    + +   +     +   
Sbjct: 146 ALEASLRIREQSSEWQLAEELLSRLERVRNESYSSHRAYLFSEMARQCLSQESRDEAATY 205

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           A  +++L      A + A +  ++  +  KA   + +  + + +   + +   LL+ +  
Sbjct: 206 AARAIELDPACAPARMVAIELAMAAAETDKAVTEI-QALRSHANEHFSLVIPQLLAHSDF 264

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKEIFLLLA 365
              +    L E+ ++  ++ + +S +           AK +   L    A  +E   L A
Sbjct: 265 YDNRGRELLAEMWRQQPDAELALSWLEALARERSADDAKVLYHDLGFVPATLRESLRLQA 324

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDG---YLSSVWLPLSPISKTLCYF 418
            +      +      W + A +      ++ +      +   W    P   +    
Sbjct: 325 VLGDEGDAHARFSRQWRKRAKN------YVCEQCGVEVIDVRWQ--CPQCHSWGSL 372


>gi|320161088|ref|YP_004174312.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1]
 gi|319994941|dbj|BAJ63712.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1]
          Length = 1424

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 72/229 (31%), Gaps = 37/229 (16%)

Query: 164  SCRIGDLNSAQRYATKALD---ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            +    D   A++YA  AL+   ++P A      V       ++    +  L+ K     E
Sbjct: 1171 ALENEDYEQAKKYAEMALERDALNPKAIMAMIRVYNHLNKEEQSLSMLETLHGKLPPILE 1230

Query: 221  WNRNRAIL---------------------------LIARSLENADKGDMIASYHDAIESL 253
             +  +A L                           L   +   AD GD+ ++   A  SL
Sbjct: 1231 LDLEKASLIYRLRGAQAALSVTQRLVTDFPEDANALALHAQVLADLGDVKSAERFAFRSL 1290

Query: 254  KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTV 308
            +   N    ++  AK   +  +  +A  +L +   ++P       E+  +Y+     +  
Sbjct: 1291 RQEPNQPDLALFLAKMQRNNGQLDQAVHLLTQAIALDPQNVELYIELGQVYSERREYDLA 1350

Query: 309  GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              L+       I           + I  +      A      A K+AP 
Sbjct: 1351 --LQTFHHAIRIAPHDPRGYYYTALILRDGKDFSGAERMLQHAAKLAPD 1397



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 6/135 (4%)

Query: 125  LEVQIALAERQYNIAHE-KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            L  Q+         A       + Q P   + A++ L       G L+ A    T+A+ +
Sbjct: 1268 LHAQVLADLGDVKSAERFAFRSLRQEPNQPDLALF-LAKMQRNNGQLDQAVHLLTQAIAL 1326

Query: 184  SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             P    +   + Q Y   +E+  A+   +   + A    R         +L   D  D  
Sbjct: 1327 DPQNVELYIELGQVYSERREYDLALQTFHHAIRIAPHDPRG----YYYTALILRDGKDFS 1382

Query: 244  ASYHDAIESLKLCDN 258
             +      + KL  +
Sbjct: 1383 GAERMLQHAAKLAPD 1397



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 55/322 (17%), Positives = 108/322 (33%), Gaps = 32/322 (9%)

Query: 85   YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
            Y+AL+   ++  A     A    + +     F  E     +  ++A+            E
Sbjct: 1027 YQALF-AFLAKDAGEKDSA--YQAILLALAQFPEEPEWQAIAAELAVELGDVEQGILHWE 1083

Query: 145  M--MLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEA-VVQ 196
                L+   T    E     +  E+        A    ++A+ +       W   A V +
Sbjct: 1084 KAVSLRPERTDYLIELGWTYMMVEA-----YEKAAEILSRAVKMESSNSSVWFNLAQVYK 1138

Query: 197  QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 ++   AI+   +        +    IL    +LEN D          A+E   L 
Sbjct: 1139 HLSRVED---AISCALRA-SEVDITHVQGFILASELALENEDYEQAKKYAEMALERDALN 1194

Query: 257  DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLK 312
              +IMA I   +     NK+ ++  +LE +    P P    ++               L 
Sbjct: 1195 PKAIMAMI---RVYNHLNKEEQSLSMLETLHGKLP-PILELDLEKASLIYRLRGAQAALS 1250

Query: 313  RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
               RL     E   +L + +++  ++G +  A   A  +++  P +    L LA++++ N
Sbjct: 1251 VTQRLVTDFPEDANALALHAQVLADLGDVKSAERFAFRSLRQEPNQPDLALFLAKMQRNN 1310

Query: 372  SHNTDKILYWTQSALHAMPDPL 393
                  + +    A+    DP 
Sbjct: 1311 GQLDQAV-HLLTQAI--ALDPQ 1329


>gi|326431022|gb|EGD76592.1| hypothetical protein PTSG_07709 [Salpingoeca sp. ATCC 50818]
          Length = 1102

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 84/243 (34%), Gaps = 20/243 (8%)

Query: 137 NIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + A    E  L +      A+     L       G +  A    TKA  +    P     
Sbjct: 263 DKARAAFERALALDENNVPALVGTAILLINQKERGAMREAVERLTKAYKLDRTNPMTLNL 322

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +   KE+S+A+  +      A + +  +A      +  +  +G++  +     ++ 
Sbjct: 323 LGNHFFHRKEYSKALGLVTHVAGTALDRD-IKAEAFHHMARIHHQQGNLDTALSHYYQAT 381

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYT-HLLSENT 307
            L  + + A     +  I + + R+A    E ++K  P        +A +Y     +  +
Sbjct: 382 SLSPSLLPAHYGLGQMYIHKKQLRRARDCFEIVYKHMPTNMAAAKILACMYVQEAETSRS 441

Query: 308 VGKLKRALRL----EEINKESVESLVIVSKIAL------EMGSIDQAHAKAMLAMKIAPR 357
              L++A  L     +   E +E+ V +  + +       +G   +A  +        P 
Sbjct: 442 ATALEKATALFDKVLKQRPEDIEAWVELGMLLIRSNPKRALGVFGEAKTRLEALGSALPP 501

Query: 358 KEI 360
           + +
Sbjct: 502 ELV 504


>gi|125525286|gb|EAY73400.1| hypothetical protein OsI_01280 [Oryza sativa Indica Group]
          Length = 892

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 83/248 (33%), Gaps = 25/248 (10%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLY--FESCRIGDLNSAQRYATKALDIS 184
            A  E+++        ++L    T  R   V  L    E    GD+ +AQ    +A    
Sbjct: 576 AAQLEKRHGTEESLY-ILLSKATTYNRHAEVLWLMYAKEKWLAGDVPAAQTILQEAYAYL 634

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240
           P++  +  A  +      E  RA   L++ ++            ++ R L N D+     
Sbjct: 635 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEERKLL 694

Query: 241 ----------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                        A    A +         +A++   ++ +    K++A+ +L K  +  
Sbjct: 695 EEEEKINGLRKSRAVLTMARKKNPATPELWLAAV---RAELRHRNKKEADALLAKALQEC 751

Query: 291 PHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           P    +      ++      +  ++    +        +  V+K+       D+A +   
Sbjct: 752 PTSGILWAAAIEMVP--RPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKFDKARSWLN 809

Query: 350 LAMKIAPR 357
            A+ +AP 
Sbjct: 810 RAVTLAPD 817


>gi|292620687|ref|XP_001921543.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Danio rerio]
          Length = 1102

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 102/302 (33%), Gaps = 29/302 (9%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EY 120
             +               GY  L   L++  A ++  A  + +YVS  H   +       
Sbjct: 163 EAIERYRQALRLKPDFIDGYINLAAALVA--AGDMEGA--VQAYVSALHCNPDLYCVRSD 218

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+        +   A       ++       A  +L       G++  A  +  KA
Sbjct: 219 LGNLLKA-----LGRLEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKA 273

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + +          +      A+ + RA+    +    +     N A++    +    ++G
Sbjct: 274 VTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQG 329

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
            +  +      +++L  +   A    A ++  +    +AE       ++ P H +  N  
Sbjct: 330 LIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNL 389

Query: 300 THLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++  E   G ++ A++L         +   +   ++ +  + G + +A      A++I+
Sbjct: 390 ANIKRE--QGNIEEAVQLYRKALEVFPDFAAAHSNLASVLQQQGKLQEALMHYEEAIRIS 447

Query: 356 PR 357
           P 
Sbjct: 448 PT 449



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 61/206 (29%), Gaps = 24/206 (11%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A E     L++  T   ++ +L       G++  A +   KAL++ PD       +  
Sbjct: 366 SEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLAS 425

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A+    +  + +  +    A           +  D+  +      ++++ 
Sbjct: 426 VLQQQGKLQEALMHYEEAIRISPTF----ADAYSNMGNTLKEMQDIQGALRCYTRAIQIN 481

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTV 308
                A    A          +A        K+   P+  + Y +L           +  
Sbjct: 482 PAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYD 539

Query: 309 GKLKRA----------LRLEEINKES 324
            ++K+            RL  ++   
Sbjct: 540 ERMKKLVSIVADQLEKNRLPSVHPHH 565



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 18/156 (11%)

Query: 148 QIPATR-EFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLA 201
               T+   +   L   + R    GD  +A+ +  +     PD   V   +  +      
Sbjct: 67  STEPTKHVLSFQGLAELAHREYQSGDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRR 126

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            + S   + L  K+      N   A         + ++G +  +     ++L+L  + I 
Sbjct: 127 LDMSFQFSTLATKQ------NPMLAEAYSNLGNVHKERGQLQEAIERYRQALRLKPDFID 180

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEI 295
             I  A +L++      A     + +    H  P++
Sbjct: 181 GYINLAAALVAAGDMEGAV----QAYVSALHCNPDL 212


>gi|149912346|ref|ZP_01900904.1| putative N-acetylglucosaminyl transferase [Moritella sp. PE36]
 gi|149804572|gb|EDM64645.1| putative N-acetylglucosaminyl transferase [Moritella sp. PE36]
          Length = 254

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 62/191 (32%), Gaps = 39/191 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEY--LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A K+H  +  + +  +E   L  L   +  LA    + A E    ++  P  R+ 
Sbjct: 83  GEVQRAIKIHQNLIARPSLTHEQRNLALLQLARDYLAAGLVDRAEELFLKLIDEPEHRQV 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                    ++  Y   KEW +AI  +  K 
Sbjct: 143 AL----------------------------------TQLIIIYEQTKEWEQAI-TIGNKL 167

Query: 216 KNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           K   +    R  A    + +       +         ++L+   + + ASI  A   I Q
Sbjct: 168 KKMGDAKIERKIAHFYCSLAASPTMLDEPKKRLTSLKKALQYDKHCVRASIMLADLHIEQ 227

Query: 274 NKKRKAEVILE 284
            + +KA V LE
Sbjct: 228 GEHKKAIVWLE 238


>gi|254483161|ref|ZP_05096394.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036532|gb|EEB77206.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 619

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 66/248 (26%), Gaps = 43/248 (17%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L E + A      + A      +L   +T   A++ L   + R G    A     +A  
Sbjct: 5   LLQEAESAHRRGDLSNAERLYRQLLSESSTNSSALFGLGTLAMRSGQYKKAADLLEQAAV 64

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAIT--FLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           I P A  +   +      + +   AI     +    +  E          A      D  
Sbjct: 65  IEPHAADIGLNLALALQKSGQIKEAIKHALRSAALASGDE------HFANAIGKVLLDLR 118

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
             +A+                 +I  ++++ +     +A  +L                 
Sbjct: 119 QPVAAMELLRS---CSPTRASTTILLSRAMGALGDWDRAVALL----------------- 158

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-IAPRKE 359
                           L + N    E  V +S  A ++     A A     +  I P   
Sbjct: 159 --------------RSLAKSNSSDPEIAVELSVAAGKLRDYPLAIASFKHYLTLITPTAS 204

Query: 360 IFLLLAQI 367
             L  A +
Sbjct: 205 DHLRFADL 212


>gi|213967293|ref|ZP_03395442.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato T1]
 gi|213928135|gb|EEB61681.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato T1]
          Length = 1230

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 79/250 (31%), Gaps = 51/250 (20%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221
           + G L++AQ    + L      P     ++       +   A+  L+     ++    + 
Sbjct: 331 QAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQSKLGDS 390

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R +A+     +     +GD+ A+     +++K   +++      A+  +  ++  KA  
Sbjct: 391 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 450

Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302
           +++++ K  P                                   P++  +   +     
Sbjct: 451 LIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFTRIPVDQRTPDMKALADEVTMTVQ 510

Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                           L    RL+ +   S E  + ++   ++ G   +    A  A+  
Sbjct: 511 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLASAYIDAGEPARGREMARAAIAQ 570

Query: 355 APRKEIFLLL 364
           AP     L+L
Sbjct: 571 APLPSADLML 580


>gi|189527635|ref|XP_001921570.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Danio rerio]
          Length = 1045

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 102/302 (33%), Gaps = 29/302 (9%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EY 120
             +               GY  L   L++  A ++  A  + +YVS  H   +       
Sbjct: 106 EAIERYRQALRLKPDFIDGYINLAAALVA--AGDMEGA--VQAYVSALHCNPDLYCVRSD 161

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+        +   A       ++       A  +L       G++  A  +  KA
Sbjct: 162 LGNLLKA-----LGRLEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKA 216

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + +          +      A+ + RA+    +    +     N A++    +    ++G
Sbjct: 217 VTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQG 272

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
            +  +      +++L  +   A    A ++  +    +AE       ++ P H +  N  
Sbjct: 273 LIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNL 332

Query: 300 THLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++  E   G ++ A++L         +   +   ++ +  + G + +A      A++I+
Sbjct: 333 ANIKRE--QGNIEEAVQLYRKALEVFPDFAAAHSNLASVLQQQGKLQEALMHYEEAIRIS 390

Query: 356 PR 357
           P 
Sbjct: 391 PT 392



 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 61/206 (29%), Gaps = 24/206 (11%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A E     L++  T   ++ +L       G++  A +   KAL++ PD       +  
Sbjct: 309 SEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLAS 368

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A+    +  + +  +    A           +  D+  +      ++++ 
Sbjct: 369 VLQQQGKLQEALMHYEEAIRISPTF----ADAYSNMGNTLKEMQDIQGALRCYTRAIQIN 424

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTV 308
                A    A          +A        K+   P+  + Y +L           +  
Sbjct: 425 PAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYD 482

Query: 309 GKLKRA----------LRLEEINKES 324
            ++K+            RL  ++   
Sbjct: 483 ERMKKLVSIVADQLEKNRLPSVHPHH 508



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 17/144 (11%)

Query: 159 SLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQ 213
            L   + R    GD  +A+ +  +     PD   V   +  +       + S   + L  
Sbjct: 22  GLAELAHREYQSGDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDMSFQFSTLAT 81

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           K+      N   A         + ++G +  +     ++L+L  + I   I  A +L++ 
Sbjct: 82  KQ------NPMLAEAYSNLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINLAAALVAA 135

Query: 274 NKKRKAEVILEKIWKVNPH--PEI 295
                A     + +    H  P++
Sbjct: 136 GDMEGAV----QAYVSALHCNPDL 155


>gi|323143196|ref|ZP_08077892.1| putative hemY protein [Succinatimonas hippei YIT 12066]
 gi|322417037|gb|EFY07675.1| putative hemY protein [Succinatimonas hippei YIT 12066]
          Length = 387

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/385 (10%), Positives = 112/385 (29%), Gaps = 34/385 (8%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+++     V    I     ++     + I   + +   S      +       +     
Sbjct: 1   MIKICIALLVTCAAIFIGPYLADSQGYIHIATNDYIIEMSVVTGTVLTVIAFIIFYFAVN 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                +  P     ML +R   K         ++    +    R +  +           
Sbjct: 61  FVLSVMHLPHGASLMLKRRADKKQITWQNNAFIAYEEGDFK--RTLALFNKAPKKDQIPT 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYAT 178
               +    A     Y      L+ + +     + AV ++       ++G++ +A     
Sbjct: 119 FTKFIAADAAFELGDYAKTTAILDEIEKSDPHAKVAV-AIVRAKMNFKLGNVEAALE--- 174

Query: 179 KALDISP-DAPW-VTEAVVQQYVL--AKEWSR----AITFLNQKKKNAKEWNRNRAILLI 230
               + P         + +    L    ++      A   ++ K  +  E N        
Sbjct: 175 ---TLQPLKLKDSSFISKISYQSLKNENDFEGLAEMAPRLISDKIIDDHEANNIYTAAFT 231

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            +        + +A      + ++     +  +    + L+  ++ +    + +    + 
Sbjct: 232 QKLALLTKTNEALALRKLLPKKVRY---ILPIN---TQLLLKIDEFKDTNAVNKLACDLL 285

Query: 291 PH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV----IVSKIALEMGSID 342
            H    PE+    ++L S     +     +L E++    E+       ++++       +
Sbjct: 286 SHNQDEPELYKAISNLQSALPKVREAVGKKL-EMHAADDEAKCSMLKALAQLESNENLNE 344

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQI 367
           +A    + AM+I    +I   LA I
Sbjct: 345 KACEHLLAAMQIKEDADICYRLALI 369


>gi|301156126|emb|CBW15597.1| conserved protein [Haemophilus parainfluenzae T3T1]
          Length = 392

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 58/200 (29%), Gaps = 44/200 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151
             +  A ++H  + +   +  E    LL  Q     +       Y+ A     +M+  P 
Sbjct: 91  GEVDRALRIHQALDRSPNYSFEQ--KLLAKQ--QLAKDFMTVGFYDRAEALYIIMVDEPE 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             E A+  L     +  +   A   A K   ISP                          
Sbjct: 147 FAENALQQLLVIYQKTKEWKKAVNIAEKLAKISPK------------------------- 181

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                   E N   A      +L    +           ++L +   S+ AS+  A   +
Sbjct: 182 --------ENNVELAQCYCEYALSGELES-ADEKRSILQKALNVSPTSVRASMLLADLEM 232

Query: 272 SQNKKRKAEVILEKIWKVNP 291
           +    R+A   LE I   NP
Sbjct: 233 ANKNYRQAIQFLENILDQNP 252


>gi|124024099|ref|YP_001018406.1| hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964385|gb|ABM79141.1| Hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT
           9303]
          Length = 764

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 92/279 (32%), Gaps = 44/279 (15%)

Query: 117 HNEYLVYLLEVQIAL-AERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNS 172
           + E ++  L+  +AL  + + + A      +L +     +A+     +  E  R  D   
Sbjct: 2   NQEEIMQQLQAAVALHNQGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDD--- 58

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQK-------------K 215
           A    + A+   P  P     +   +  A+ W  AI      L+ K              
Sbjct: 59  AITLLSSAVSAQPGNPDANYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICL 118

Query: 216 KNAKEWNRNRAILLIARSLE-------------NADKGDMIASYHDAIESLKLCDNSIMA 262
           K  +++  +  +L  A S +               ++     +      ++++  +   A
Sbjct: 119 KETEQYEHSEIVLKRAISRQPRFAAAWLNLGNTLKEQKKYSEAIVSYRNAIEVKPDFAEA 178

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRL 317
            +     L  +    +A     K  +V   P+ A  Y  L             +      
Sbjct: 179 YLNLGNVLKEEGAVEEAIASYRKAIEVK--PDCAGAYFSLGFVLKGEGEVEEAIVSYRNA 236

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            E+  +  E+ + +  +  E G +++A A    A+++ P
Sbjct: 237 IEVKPDLAEAYLNLGYVLKEEGDVEEAIASYRQAIEVKP 275



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 63/199 (31%), Gaps = 39/199 (19%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G +  A     KA+++ PD      ++        E   AI       +   +    
Sbjct: 187 KEEGAVEEAIASYRKAIEVKPDCAGAYFSLGFVLKGEGEVEEAIVSYRNAIEVKPDL--A 244

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK-------- 276
            A L +   L+  ++GD+  +     +++++           A + ++            
Sbjct: 245 EAYLNLGYVLK--EEGDVEEAIASYRQAIEVKPEF-------ADAYLNLGNVLEEEGEIE 295

Query: 277 ------RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
                 R+A  +         +P+    Y+ L        + +  ++   +   ++K  +
Sbjct: 296 EAIASYRQAIEV---------NPDFVEAYSDLGKLFYEGGDYMSSIEFFQKALSLDKNHL 346

Query: 326 ESLVIVSKIALEMGSIDQA 344
           +S   +       G ID A
Sbjct: 347 KSAATLGFSFFRCGQIDAA 365


>gi|300795427|ref|NP_001179690.1| transmembrane and TPR repeat-containing protein 1 [Bos taurus]
          Length = 939

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             R    A    +  LQ+      A+++L            A      ++   P+     
Sbjct: 583 LTRDTTEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAY 642

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        K   + +     L     +   D G    +     +
Sbjct: 643 SSLASLLAEQERFKEAEEIYLAGIKKCPDSSD----LHNNYGVFLVDTGFPEKAVAHYQQ 698

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           ++KL  +  +A +   +   S           ++A  +  K   ++P   +  +Y +  +
Sbjct: 699 AIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTEILSP---LGALYYN--T 753

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363
                 L+       +     E  + ++++   MG   +A       +       E + L
Sbjct: 754 GRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSDIVSEETGCLECYRL 813

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I        DK L     AL     DP
Sbjct: 814 LSAIHSKQEQ-HDKALDAIDKALKLKPKDP 842



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 95/286 (33%), Gaps = 43/286 (15%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +    ++A E  +  LQ+ 
Sbjct: 680 GVFLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGDNSVAEEWYKRALQVA 737

Query: 151 A-TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             T   +    LY      G    A +   +A+ + P    +  A+ Q   +  +     
Sbjct: 738 RKTEILSPLGALY---YNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQ----- 789

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICA 266
                +K  +   +     L   R L   ++ +     +     ++LKL        I  
Sbjct: 790 -TKEAEKMTSDIVSEETGCLECYRLLSAIHSKQEQHDKALDAIDKALKLKPK-DPKVI-- 845

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           ++   ++  + + + +L+K ++                              E+N +  +
Sbjct: 846 SELFFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQ 881

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           + + +  I    G+   A      A+++ P  ++    LA++++  
Sbjct: 882 AWMNMGGIQHIKGNYVSARTYYERALQLVPDSKLLQENLAKLDRLE 927


>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
          Length = 397

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 115/322 (35%), Gaps = 40/322 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIA----HEKLE 144
           GL  ++  N   A K            +   + LL  + Q      +Y+ A     + ++
Sbjct: 57  GLDFLSCGNFNEAMKAFDKA----IEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIK 112

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAK 202
           +  + P        ++ F   ++G  + A +   KAL++ PD P  W  +A+      A 
Sbjct: 113 INAEDPDI----WNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKAL--NLSQAG 166

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           ++  AI    +  +   ++        + + +     G    +     ++++L  N   A
Sbjct: 167 DYKAAIEAYEKVLEENSDYKE----AWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEA 222

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA--NIYTHLLS-ENTVGKLKRALRLEE 319
                  + S    R+A    +K  +++P  + A  N+   L + E     +K   +  E
Sbjct: 223 WHYKGVDMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIE 282

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQI------- 367
           IN E+ +          +M   ++A      A ++ P        +  +LAQ+       
Sbjct: 283 INSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESL 342

Query: 368 ---EQANSHNTDKILYWTQSAL 386
              EQA   N +    W   A+
Sbjct: 343 EIYEQALKLNPEAADSWFGKAV 364


>gi|321463604|gb|EFX74619.1| hypothetical protein DAPPUDRAFT_324191 [Daphnia pulex]
          Length = 1043

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 31/303 (10%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 109 EALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 166

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       GD+  A  +  K
Sbjct: 167 NLLKA-----LGRLDEAKACY---LKAIETRGDFAVAWSNLGCVFNAQGDIWLAIHHFEK 218

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 219 AVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NHAVVHGNMACVYYEQ 274

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      +++L  +   A    A +L  + + + AE       ++ P H +  N 
Sbjct: 275 GLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGQVQDAEDCYSTALRLCPAHADSLNN 334

Query: 299 YTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++  E   G ++ A RL         +   +   ++ +  + G +++A      A++I
Sbjct: 335 LANIKRE--QGFIEEATRLYLKALDVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 392

Query: 355 APR 357
            P 
Sbjct: 393 QPS 395



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   +S   +    H + L  L    I   +     A       L +      A 
Sbjct: 309 GQVQDAEDCYSTALRLCPAHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPDFAAAH 366

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++ + A+    +  + 
Sbjct: 367 SNLASVLQQQGKLNEALMHYKEAIRIQPSFADAYSNMGNTLKEMQDINGALQCYTRAIQI 426

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G +  +      +LKL  +   A    A  L
Sbjct: 427 NPAF----ADAHSNLASIHKDSGQIPEAIQSYRTALKLKPDFPDAYCNLAHCL 475



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 70/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P  P     +        +   A    +   +         A  L   +    
Sbjct: 285 RRAIELQPHFPDAYCNLANALKEKGQVQDAEDCYSTALRLCPA----HADSLNNLANIKR 340

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +  +   A    A  L  Q K  +A +  ++  ++   P  A+
Sbjct: 341 EQGFIEEATRLYLKALDVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ--PSFAD 398

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G I +A      A+
Sbjct: 399 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIQSYRTAL 458

Query: 353 KIAPR 357
           K+ P 
Sbjct: 459 KLKPD 463


>gi|299136966|ref|ZP_07030149.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298601481|gb|EFI57636.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 745

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 19/201 (9%)

Query: 93  MSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE---RQYNIAHEKLEMMLQ 148
           +++  A     A  +           +E    LL  + AL E      + A   L   L+
Sbjct: 535 VALGNAGQTDEALTVLQGA-----IDHEPDNALLWYEKALIESRRGDSDKAVADLRKTLE 589

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +      A  +L     + GD+  A+     AL I+P        + +      +W +A 
Sbjct: 590 LKPDFADAQNTLGSVLAQSGDIQHAETAFRAALTINPYDSATRANLGRLLAGTGDWKQAA 649

Query: 209 TFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
             L +  +        + + A+ L+              +  +A  +LK+      A + 
Sbjct: 650 FHLQKAVQLDPANVNAHGDYAVALLQLKRLP-------EAKTEAEAALKINPEFGPAQLN 702

Query: 266 AAKSLISQNKKRKAEVILEKI 286
            A+ L+ Q + R A  +LEK 
Sbjct: 703 LAEILLQQGQARMALPLLEKA 723



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 10/208 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+L  A     +AL + P +      +      A +   A+T L     +  +    
Sbjct: 504 RHTGNLPGAIDAYRQALKLDPLSSRAQRRLGVALGNAGQTDEALTVLQGAIDHEPD---- 559

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+L   ++L  + +GD   +  D  ++L+L  +   A       L      + AE    
Sbjct: 560 NALLWYEKALIESRRGDSDKAVADLRKTLELKPDFADAQNTLGSVLAQSGDIQHAETAFR 619

Query: 285 KIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
               +NP+ + A           + +         +  +++  +V +    +   L++  
Sbjct: 620 AALTINPY-DSATRANLGRLLAGTGDWKQAAFHLQKAVQLDPANVNAHGDYAVALLQLKR 678

Query: 341 IDQAHAKAMLAMKIAPRKEIFLL-LAQI 367
           + +A  +A  A+KI P      L LA+I
Sbjct: 679 LPEAKTEAEAALKINPEFGPAQLNLAEI 706


>gi|295400328|ref|ZP_06810307.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus
            thermoglucosidasius C56-YS93]
 gi|294977603|gb|EFG53202.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus
            thermoglucosidasius C56-YS93]
          Length = 1396

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 95/265 (35%), Gaps = 28/265 (10%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            G+ S A      A K               L  L   ++  A  +++ A    E  L+I 
Sbjct: 888  GMFSKAIGVYEQASKAQKSTF--------PLYRL--AEMYRAFERWDEAKRYYEACLEID 937

Query: 151  ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--- 207
                 A   L   +    +++  + +  KAL+  P         +     A  +      
Sbjct: 938  DAFAVAHLRLAVLNEMEENIDKQRFHLQKALEHDPLH-------IHVACAAALFDDPSLL 990

Query: 208  ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            +  +   ++ A +     ++  I  ++     GD+        ++L+L  +       AA
Sbjct: 991  LQTMEAARERAGDVWYYDSLGYIYGAM-----GDISKEKEAVEQALRLHPDHPDVLHHAA 1045

Query: 268  KSLISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
            K L+ + K R+A  ILE++ + +  + ++   Y    S    G  K   RL +   ++ +
Sbjct: 1046 KVLVKEGKSREAAAILERLIEQDVRNEDLYETYVQAFSYTMRGIGKLRERLRKWKLDNQK 1105

Query: 327  SLVIV--SKIALEMGSIDQAHAKAM 349
              ++   +  AL    +D A  +A 
Sbjct: 1106 KSIVYMHAASALSSSMLDIARGEAD 1130


>gi|170701256|ref|ZP_02892224.1| HemY domain protein [Burkholderia ambifaria IOP40-10]
 gi|171319137|ref|ZP_02908258.1| HemY domain protein [Burkholderia ambifaria MEX-5]
 gi|170133849|gb|EDT02209.1| HemY domain protein [Burkholderia ambifaria IOP40-10]
 gi|171095657|gb|EDT40616.1| HemY domain protein [Burkholderia ambifaria MEX-5]
          Length = 395

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/409 (11%), Positives = 115/409 (28%), Gaps = 45/409 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  ++  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAILFGIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVITIVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAARDALAVDAN---- 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                  Q A +      AH   E   +            +       +   A+  A   
Sbjct: 119 -------QGAASLVAATAAHRMHEYTRRDD----------WLSKVDAPEWQDARLLAAAD 161

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +           A +       +   A     + ++  K W     +       E     
Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221

Query: 241 DMIASYHDAIESL----KLCDN--------SIM-------ASICAAKSLISQNKKRKAEV 281
             +     A E+L    +   +                   +  AA+ L+   ++ +A  
Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPLERQSPRLADLAAELLVPLERRPEARR 281

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           I+E+    N    +   Y      + +  +++A   ++ + +  + L  + ++  +    
Sbjct: 282 IVEEALAHNWDARLLRRYPDTAGGDALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLW 341

Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +A +    A+K A  +         LA++ +          ++ +SAL
Sbjct: 342 GKAQSFLEAALKQADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|294055962|ref|YP_003549620.1| hypothetical protein Caka_2434 [Coraliomargarita akajimensis DSM
           45221]
 gi|293615295|gb|ADE55450.1| hypothetical protein Caka_2434 [Coraliomargarita akajimensis DSM
           45221]
          Length = 554

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  AR+     +          + LL   I            + + ML+       A+
Sbjct: 281 GDLDQARRYAILRNVAAPMSAAPRLELLY--IYNLSGDEEREQRETKRMLKQFRKDVTAL 338

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            SL   +   G++  A+R   +AL+           +++ +++  +++ AI+F  +  K 
Sbjct: 339 QSLANFAADTGNIELARRTYEEALENEFPIDSFALLLIEAHLVDADYAGAISFAEELIKE 398

Query: 218 AKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNK 275
             +W N+ + I    R++ +             +++     N   AS  A A+   +  +
Sbjct: 399 KPDWLNQRKPIFESLRAVASFGINRPDLG-EIYLQAFLDGSNVQPASFLAVARRFNNIER 457

Query: 276 KRKAEVILEKIWKVNP 291
            ++A  +L   +++ P
Sbjct: 458 PQQARKVLMAAYQLEP 473


>gi|309791248|ref|ZP_07685779.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308226674|gb|EFO80371.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 1126

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 101/332 (30%), Gaps = 56/332 (16%)

Query: 96   AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATR 153
            A  N    + +++Y        N  L +L      LA  +   A +  + +LQ   P T 
Sbjct: 772  ALGNQNPNQAINAYSKAVRLDPNSALPHLKLATAYLATNRLQSAEDSAQNVLQRTQPPTD 831

Query: 154  EF-------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                     A+  L   + R  DL  A+++ T+AL ISP        + +  V   +W  
Sbjct: 832  LVVADLRAQALVLLGDVALRKPDLALARQHYTEALQISPQMLTAQLGMGRVAVGEGQWGV 891

Query: 207  AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            A+ +               A +    +      G +  + +   ++L +      A +  
Sbjct: 892  ALGYFETA--TNLPGGTQDANVQFWLAEGLLRSGALDRAMNAYQQALAIRPTFPEALLGL 949

Query: 267  AKSLISQNKKRKAEVILEK------------------------------IWKV--NPHPE 294
            A+   +Q     A   +E+                               +        +
Sbjct: 950  AQLQYAQGDPATALQTVEQSIGQRGDYAEALLFKGKLLQEYGRIDQALVAYDASIRASSQ 1009

Query: 295  IANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            IA  Y             +  +  L+RA+ L        E+   + +        DQAH 
Sbjct: 1010 IAETYYRRSLLLISTERYDKAINDLRRAVTL---QPNFPEAHYWMGRAYYARNQDDQAHD 1066

Query: 347  KAMLAMKIAP--RKEIFLLLAQIEQANSHNTD 376
                A+ + P   + ++ L    E  +  +  
Sbjct: 1067 AFKRAVDLNPSYTEALYYLGLAAEDLDRRDEA 1098



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 69/223 (30%), Gaps = 4/223 (1%)

Query: 88   LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
            L  G +++      +A       +       +  V     +  L     + A    +  L
Sbjct: 877  LGMGRVAVGEGQWGVALGYFETATNLPGGTQDANVQFWLAEGLLRSGALDRAMNAYQQAL 936

Query: 148  QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
             I  T   A+  L       GD  +A +   +++    D         +         +A
Sbjct: 937  AIRPTFPEALLGLAQLQYAQGDPATALQTVEQSIGQRGDYAEALLFKGKLLQEYGRIDQA 996

Query: 208  ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            +   +   +     +   A     RSL          + +D   ++ L  N   A     
Sbjct: 997  LVAYDASIR----ASSQIAETYYRRSLLLISTERYDKAINDLRRAVTLQPNFPEAHYWMG 1052

Query: 268  KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            ++  ++N+  +A    ++   +NP    A  Y  L +E+   +
Sbjct: 1053 RAYYARNQDDQAHDAFKRAVDLNPSYTEALYYLGLAAEDLDRR 1095



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 95/298 (31%), Gaps = 32/298 (10%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL ++     P    +    +      +   + L E +      + N A    + +LQ+ 
Sbjct: 496 GLAALFGRTNPADEGLRLLETLDLRTPDRPPILLAEARAYRVAEKLNEADRLYDRVLQLI 555

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-------APWVTEAVVQQYVLAKE 203
             R    +     +   GD  +A +    A++  P           + +          +
Sbjct: 556 PQRPEGYFGKAMVAQERGDSGTAMQLLQMAIERDPSFFPARIELAQIAQQRGDLNAAISQ 615

Query: 204 W----------SRAITFLNQKKKNAKE-WNRNRAILLIARSLENA----------DKGDM 242
           W          + A+      + +    +     +LL     + A          D G  
Sbjct: 616 WRSVSIQRPGPAAAVPLAQALRLSGPTGYVEAEQVLLPLSVTDPAAAIELGRLYNDAGRP 675

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
            AS     ++L+L   S  A+    + L      + AE  L    + +     A +    
Sbjct: 676 EASIQAYRDALRLDPQSSTAAFELGERLAVLGDLKAAEAALRDALRFDDRNIAARLALAR 735

Query: 303 LSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           L E  +G+  RA +   I        + +L+++   AL   + +QA      A+++ P
Sbjct: 736 LYEGPMGQPDRADKEYGIALDQGVHDLNTLILIGDTALGNQNPNQAINAYSKAVRLDP 793


>gi|165976432|ref|YP_001652025.1| HemY protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165876533|gb|ABY69581.1| HemY protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 416

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   +     +S     V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLLLASLIVGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +   F       ++    R + K  +    GLM ++  +   A K+ S  ++     +E 
Sbjct: 61  IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           ++ L++  + A        A++                  L   +   G  N A   A  
Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160

Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            + +     P A    +++++        +  +       K++K +N    IL
Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210


>gi|94971634|ref|YP_593682.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553684|gb|ABF43608.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 1404

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 89/269 (33%), Gaps = 9/269 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL    +    +   +       +Q       A   L     ++G  + A+R   + L  
Sbjct: 107 LLLGYTSRLAGRNQESINAYNHAIQTDPKSLDAKSGLAQTYMKMGRTDEAKRLLAQVLAA 166

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                       + Y+  K++ + I +L +            A   +  ++         
Sbjct: 167 GSTRQNDLLVAGELYLRTKDYQQGINYLQRADNLKPN-----AHAELLMAMGYMKMKQPQ 221

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHL 302
            +      + +   N++      A      +  + A   L    +  P   +A++ +T+ 
Sbjct: 222 KAKQLLDMAKRRAPNNVEIFQAVATFYREDHDYKNAIATLNSAPRKTPA-LLADLGFTYE 280

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIF 361
           LS +        ++      + ++  +  ++  ++ G   +A      A  I P    + 
Sbjct: 281 LSGDKQSAAATYVKAANAAPKEIKFQLSAAQSLIQSGDKTKAQDFLKRAAAIDPNHYRLH 340

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMP 390
            + A + ++ + N + +  + Q AL AMP
Sbjct: 341 AIRAGLAKSENRNDEAVKEY-QLALSAMP 368



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 89/278 (32%), Gaps = 23/278 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--RE 154
           + +   A    +YV   +    E    L   Q  +       A + L+    I     R 
Sbjct: 282 SGDKQSAA--ATYVKAANAAPKEIKFQLSAAQSLIQSGDKTKAQDFLKRAAAIDPNHYRL 339

Query: 155 FAVY-SLYFESCRIGDLNSAQRYATKALDISPD--APWVTE--AVVQQYVLA-----KEW 204
            A+   L   +      + A +    AL   P    P       +++  +          
Sbjct: 340 HAIRAGL---AKSENRNDEAVKEYQLALSAMPKEGVPEGQLYPVLLRLNLSEALKDTGNT 396

Query: 205 SRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             A   +   ++   + N     +A  L  R+   A   D   +  D  E+ KL  ++ +
Sbjct: 397 EAAKQQVEIAEQEISKINVEGPAKAEFLRVRASIKASGEDYAGAEADLKEAQKLDPDNQL 456

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLE 318
            ++  A  L    +K +++ +   I + +P   +   A  Y      +T G       L 
Sbjct: 457 ITLQYANLLWKAGRKDESKQMYLGILQGDPKNRYALEALGYLARDVGDTAGAEHYFTALA 516

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +   +   + + +  +        +A A    A ++AP
Sbjct: 517 QAYPDDYIAYLALGDLYTATRDFTRALAAYDKAHELAP 554



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 79/245 (32%), Gaps = 22/245 (8%)

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYD-KGYKA---LYTGLMSIAAHNIPLARKMHSY 109
            W+LL   SR        +    H    D K   A   L    M +   +   A+++ + 
Sbjct: 105 LWLLLGYTSRLAGRNQESINAYNHAIQTDPKSLDAKSGLAQTYMKMGRTD--EAKRLLAQ 162

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCR 166
           V    +     L  L+  ++ L  + Y      L+    +                    
Sbjct: 163 VLAAGSTRQNDL--LVAGELYLRTKDYQQGINYLQRADNLKPNAHAELLMAMGYMKMKQ- 219

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
                 A++    A   +P+   + +AV   Y    ++  AI  LN          R   
Sbjct: 220 ---PQKAKQLLDMAKRRAPNNVEIFQAVATFYREDHDYKNAIATLNSA-------PRKTP 269

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            LL          GD  ++    +++       I   + AA+SLI    K KA+  L++ 
Sbjct: 270 ALLADLGFTYELSGDKQSAAATYVKAANAAPKEIKFQLSAAQSLIQSGDKTKAQDFLKRA 329

Query: 287 WKVNP 291
             ++P
Sbjct: 330 AAIDP 334



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 3/120 (2%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATRE 154
           A+     A         Q    +  L+ L    +     + + + +    +LQ  P  R 
Sbjct: 432 ASGEDY-AGAEADLKEAQKLDPDNQLITLQYANLLWKAGRKDESKQMYLGILQGDPKNRY 490

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             + +L + +  +GD   A+ Y T      PD      A+   Y   ++++RA+   ++ 
Sbjct: 491 A-LEALGYLARDVGDTAGAEHYFTALAQAYPDDYIAYLALGDLYTATRDFTRALAAYDKA 549


>gi|29655359|ref|NP_821051.1| HemY [Coxiella burnetii RSA 493]
 gi|154705813|ref|YP_001425479.1| HemY [Coxiella burnetii Dugway 5J108-111]
 gi|165924033|ref|ZP_02219865.1| hemY protein [Coxiella burnetii RSA 334]
 gi|212213524|ref|YP_002304460.1| HemY [Coxiella burnetii CbuG_Q212]
 gi|29542631|gb|AAO91565.1| HemY [Coxiella burnetii RSA 493]
 gi|154355099|gb|ABS76561.1| HemY [Coxiella burnetii Dugway 5J108-111]
 gi|165916518|gb|EDR35122.1| hemY protein [Coxiella burnetii RSA 334]
 gi|212011934|gb|ACJ19315.1| HemY [Coxiella burnetii CbuG_Q212]
          Length = 392

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/375 (13%), Positives = 116/375 (30%), Gaps = 34/375 (9%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++     + I + +    T+ +  +  L      + ++F +          +      + 
Sbjct: 21  MTRDTGYLLIVYRHWSIETTLWAAILSLLILFILFYIIFRLLGRAARLSKNIHRWRKMKQ 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
           Y +  +    GL  +A    P A +K+              LV  L    A   +Q    
Sbjct: 81  YRRARQLTTAGLCELAEGRWPSAEQKLVKGAK----ITKNPLVNYLAAAQAANAQQSYER 136

Query: 140 HEKLEMMLQIPATREFA--VYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAV 194
            +    +     T+     +     ++           A     +    +P+     + +
Sbjct: 137 RDNYLRLAH---TKAKGSDIAVDLTQARLQISKNQWEQALATLERVNRANPNHACTLQLL 193

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA----I 250
            Q YV  ++W +    L + +K   E          A +L+  +K   +     A     
Sbjct: 194 KQVYVHLQDWEKLRHLLPRLRKQKVE---------SAEALDAFEKIIYVNLLSAADRKGK 244

Query: 251 ESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           ++L        +     I        SLI  ++  KA  ++E   K   +  + + Y   
Sbjct: 245 QALIAMWNSFPRRSTQEIELIDVYTHSLIKYDEGDKAIPLIESALKKEWNSNLVSTYGLA 304

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             E    +L  A    +   +  E  + + +++     + +A      ++K+ P    + 
Sbjct: 305 RGEKKTDQLTTAETWLKKYPKEPELFLCLGRLSRREKFLGKARDYLQTSIKLMPSSAAYR 364

Query: 363 LLAQIEQANSHNTDK 377
            L Q+ +  +     
Sbjct: 365 ELGQVYEEQNQKDSA 379


>gi|291567436|dbj|BAI89708.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 883

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 79/272 (29%), Gaps = 44/272 (16%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIG 168
            +      E +    +    L E +++ A  K + ++Q       A     L  +     
Sbjct: 2   ERDFQLPGELVSLHQQAIAYLEEGKFDEAIAKCQQVIQQQPEWVMAYKTLGLALQKSNR- 60

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNR 225
            L +A+    KA+++ P+       +   Y     W  A T L Q       +    RN 
Sbjct: 61  -LEAAENAYKKAINLDPNLVAAYGNLGSLYAQQGRWEEAETTLKQAINIDPNFRGVYRNL 119

Query: 226 AILLIARSL------------------------------ENADKGDMIASYHDAIESLKL 255
           A +L  R                                  A+ G    +     +++  
Sbjct: 120 ARVLTQRGRPEEAQIYWKRGLQLDGILKQRGQEELQIGNTLAEAGKWSEAVSAFQKAIAY 179

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310
                +A       L+  N+  +A    EK   + P     H  +   +  L        
Sbjct: 180 HPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHHHLGEAFQALNQ--PALA 237

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +    +   IN +   S   ++K A ++   +
Sbjct: 238 VSAFRKAIAINPDFCWSYYQLAKAATQLQQWE 269



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 73/225 (32%), Gaps = 35/225 (15%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +++ A    +  +        A + L     ++     A     KA+ I PD  W   
Sbjct: 163 AGKWSEAVSAFQKAIAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHH 222

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + +    + + A++   +      ++       L   + +     D+  +Y  AI+ 
Sbjct: 223 HLGEAFQALNQPALAVSAFRKAIAINPDFC-WSYYQLAKAATQLQQWEDVADAYPKAIQ- 280

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
             L  + +   +  +K+L   N+           W+     ++  +Y  +LS+       
Sbjct: 281 --LKSDFLEFYLGLSKALFELNR-----------WE-----DLVKLYPLILSQ------- 315

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                     + ++    +++  +E    D A       ++  P 
Sbjct: 316 --------QPDFIKHYYSLAETLIEQECWDAALVIYETIIEHNPS 352


>gi|94967946|ref|YP_589994.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549996|gb|ABF39920.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 566

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 73/274 (26%), Gaps = 14/274 (5%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL  + A +   A +  +           YL  L      L   +++ A +     LQI 
Sbjct: 293 GLAFMQAGDGEGAIREFNQALNLKPEDVGYLGNL--GAAYLQLSEFDNAVDNFRKALQIA 350

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                  + L        DL  A     +A+ + P        +        E+  A+  
Sbjct: 351 PANASLHHDLALTLKLKDDLAGAAAELREAIRLDPKLYDAHYTLGVTLWQQGEFPAAVEE 410

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L        ++      L                S      +LK+  +   A    A  L
Sbjct: 411 LEAALAQKPDYAEAYYTLGTVYK----QMNKPRESAEALRSALKIQPDFAGAHTTLAAVL 466

Query: 271 ISQNKKRKAE--VILEKIWKVNPHPEIANIYTH------LLSENTVGKLKRALRLEEINK 322
                   A     +            A ++        L + +  G + +  R  E   
Sbjct: 467 RQLGDTAGASEEARIGAELAKKKTGMQAAVFATNSGIRLLNAGDLDGAVSQFRRATESAP 526

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +       ++      G  D+A A+   A  + P
Sbjct: 527 DYAMGHFQLATALSRQGKRDEADAEFSKAATLDP 560



 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 11/200 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   GD  SA     +A  + P+ P    AV Q        + AI +     K   + 
Sbjct: 22  VQAYGRGDDASALSSFQQASKLDPNNPEYQNAVGQALFKQGRPAEAIPYFRHALKLRPDL 81

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A++               A+  +   ++K+  N + A+    +SL ++     A  
Sbjct: 82  ----AVIHAYLGQALLADHQADAAISEYRIAVKMAPNEVEANRGLGRSLSTKGDLDGAIA 137

Query: 282 I----LEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +    LE   +  P H ++ ++      ++ V   ++  +  +++++   +   +    L
Sbjct: 138 VYRSALETNSQSAPLHDDLGSLLA--QKKDFVAAQQQFEQALKLDRQYEPAHFHLGVALL 195

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
                 +A      A+++AP
Sbjct: 196 SQDKDPEAMLSLQEAVRLAP 215



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 90/286 (31%), Gaps = 39/286 (13%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFES 164
           M S         N+   +    ++         A +  +   Q  ++    +   L   +
Sbjct: 204 MLSLQEAVRLAPNDVAAHFFLGRVLETLGDNANALQNYKDAAQR-SSEFPGLQERLGLTA 262

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------- 216
            R+G++ +A     KA+  SP  P +   +   ++ A +   AI   NQ           
Sbjct: 263 QRVGEMPTAISAFQKAIAQSPQNPDLHNDLGLAFMQAGDGEGAIREFNQALNLKPEDVGY 322

Query: 217 --------------NAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLK 254
                         +    N  +A+        L    +L    K D+  +  +  E+++
Sbjct: 323 LGNLGAAYLQLSEFDNAVDNFRKALQIAPANASLHHDLALTLKLKDDLAGAAAELREAIR 382

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVG 309
           L      A      +L  Q +   A   LE    +   P+ A  Y  L +          
Sbjct: 383 LDPKLYDAHYTLGVTLWQQGEFPAAVEELEAA--LAQKPDYAEAYYTLGTVYKQMNKPRE 440

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +      +I  +   +   ++ +  ++G    A  +A +  ++A
Sbjct: 441 SAEALRSALKIQPDFAGAHTTLAAVLRQLGDTAGASEEARIGAELA 486



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAIL 228
             SA+     AL I PD       +        + + A        +   K+     A+ 
Sbjct: 439 RESAEAL-RSALKIQPDFAGAHTTLAAVLRQLGDTAGASEEARIGAELAKKKTGMQAAVF 497

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                +   + GD+  +      + +   +  M     A +L  Q K+ +A+    K   
Sbjct: 498 ATNSGIRLLNAGDLDGAVSQFRRATESAPDYAMGHFQLATALSRQGKRDEADAEFSKAAT 557

Query: 289 VNPH 292
           ++PH
Sbjct: 558 LDPH 561


>gi|170571107|ref|XP_001891604.1| U5 snRNP-associated 102 kDa protein [Brugia malayi]
 gi|158603817|gb|EDP39598.1| U5 snRNP-associated 102 kDa protein, putative [Brugia malayi]
          Length = 970

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 36/257 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--- 223
            GD+ +++    +A   +P++  +  A V+      E+ RA   L + ++ A        
Sbjct: 650 AGDVKASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLK 709

Query: 224 -----------NRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257
                        A  L+  +LE                  + +   +     + +K C 
Sbjct: 710 SVRLEWCLKDLIAAKKLLMEALEQFPETPKLYLMMGQILQQEKNYSEARRYFSDGVKHCP 769

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--L 315
             I   I  ++   SQN+  KA   LEK    N  P+ + ++   +       LK     
Sbjct: 770 TFIPLWIWLSRLEESQNQTIKARSDLEKARLRN--PKNSELWLEAIRIEARAGLKELAQE 827

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHN 374
           RL    +E   S  + ++ A+ M        K++ A+K      ++ L +A++       
Sbjct: 828 RLARALQECEHSGRLWAE-AIFMEERHGRRTKSVDALKKCEHSADVLLAVAKLFWTERK- 885

Query: 375 TDKILYWTQSALHAMPD 391
             K   W Q  +   PD
Sbjct: 886 IRKAREWFQRTVKIDPD 902



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 12/202 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++  A+K+   +     F     +YL+  QI   E+ Y+ A       ++   T      
Sbjct: 719 DLIAAKKL--LMEALEQFPETPKLYLMMGQILQQEKNYSEARRYFSDGVKHCPTFIPLWI 776

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L            A+    KA   +P    +    ++    A     A   L +  +  
Sbjct: 777 WLSRLEESQNQTIKARSDLEKARLRNPKNSELWLEAIRIEARAGLKELAQERLARALQEC 836

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +   R  A  +                   ++++LK C++S    +  AK   ++ K RK
Sbjct: 837 EHSGRLWAEAIFMEERH--------GRRTKSVDALKKCEHSADVLLAVAKLFWTERKIRK 888

Query: 279 AEVILEKIWKVNPHPEIANIYT 300
           A    ++  K++  P+  + + 
Sbjct: 889 AREWFQRTVKID--PDFGDAWA 908



 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 87/254 (34%), Gaps = 17/254 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTE 192
           +    A +    +             +  E  +   +  A+ + A +A + +        
Sbjct: 537 KDAVDAEKANCRLTSQAIISHVLGIGVEEEDRKHTWMEDAESFVAQEAYECARAVY--AH 594

Query: 193 AVVQQYVLAKEWSRA---------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           A++        W  A             +Q  + A E       L +  +      GD+ 
Sbjct: 595 ALLVFPTKKGIWFAAAHFERNHGTTESYDQLLQKAVEKCPKAETLWLMYAKSKWLAGDVK 654

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           AS      + +   NS    + A K     N+ ++A  +LEK  ++ P P I      L 
Sbjct: 655 ASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLKSVRLE 714

Query: 304 ---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KE 359
               +    K      LE+   E+ +  +++ +I  +  +  +A       +K  P    
Sbjct: 715 WCLKDLIAAKKLLMEALEQF-PETPKLYLMMGQILQQEKNYSEARRYFSDGVKHCPTFIP 773

Query: 360 IFLLLAQIEQANSH 373
           +++ L+++E++ + 
Sbjct: 774 LWIWLSRLEESQNQ 787


>gi|83945716|ref|ZP_00958061.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633]
 gi|83850917|gb|EAP88777.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633]
          Length = 685

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 106/303 (34%), Gaps = 49/303 (16%)

Query: 143 LEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVT--EAVVQQ 197
              ++    T+  A+     E+    R G   +A +     L  +PD        AV Q+
Sbjct: 8   YGDVMSADETQTQALR----EAETHMRKGAFEAALQVLEPVLSDAPDHVDALYMRAVCQR 63

Query: 198 YVLAKEWSRAITFLNQKKKNAKEW---------------NRNRAI--------------- 227
           Y+     + A   L+   + A E+               +R+RA+               
Sbjct: 64  YLKQG--NDARATLDHLLRVAPEFGRGLQEDGHLFRDQGDRDRALGSYRAAVRANPALHA 121

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
              A++   A++G    +     ++ ++    +  ++ AA   + +N+  KAE  L + W
Sbjct: 122 AWSAQAQILAEQGRADEARLAQAQADQIKA--LPPALQAAMHHLHENRLLKAEN-LCRSW 178

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQ 343
                 ++A +       + +G L+ A  L E        + +  V   +I  +     +
Sbjct: 179 LTQNPKDVAGMRLLAEIGSRLGVLEDAEFLLESAVTFEPGNADLRVDYIRILRKRQKFGK 238

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISDDGYLS 402
           A  +A       P   +F+    IE+  + +  + +      L  A  DP  ++  G+  
Sbjct: 239 ALEEAQTLYDRDPDNPVFISQLAIERMQTGDYARAVELFDRVLERAPGDPATLTSRGHAL 298

Query: 403 SVW 405
             W
Sbjct: 299 KTW 301



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 70  AMLFHMLHKRNYDKGYKAL--YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             L         +    A       +         AR   +   Q        L      
Sbjct: 104 RALGSYRAAVRANPALHAAWSAQAQILAEQGRADEARLAQAQADQIKALP-PAL------ 156

Query: 128 QIA---LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           Q A   L E +   A       L         +  L     R+G L  A+     A+   
Sbjct: 157 QAAMHHLHENRLLKAENLCRSWLTQNPKDVAGMRLLAEIGSRLGVLEDAEFLLESAVTFE 216

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    +    ++     +++ +A+       +   + + +  + +   ++E    GD   
Sbjct: 217 PGNADLRVDYIRILRKRQKFGKALEE----AQTLYDRDPDNPVFISQLAIERMQTGDYAR 272

Query: 245 SYHDAIESLKLCDNSIMASIC-AAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302
           +       L+       A++     +L +  +  +A    +   + +P H +      +L
Sbjct: 273 AVELFDRVLERAPG-DPATLTSRGHALKTWGRSEEAIASYQAACQSDPAHGDAWYGLANL 331

Query: 303 LSENTVGKLKRALRLEEINKESV-ESLV----IVSKIALEMGSIDQA--HAKAMLAMKIA 355
            +       +  ++ E+       ++ +     + K   + G    A    +   A+K  
Sbjct: 332 KTYRFDADERAIMQAEDSRPGQPLQTRINLNFALGKAFEDEGDFASAFERYREGNALKTR 391

Query: 356 PRK 358
             +
Sbjct: 392 QTR 394


>gi|116619356|ref|YP_821512.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222518|gb|ABJ81227.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 759

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 68/231 (29%), Gaps = 9/231 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G    A     +A+ ++P +     A+        +   A+  L +  + A      
Sbjct: 484 QSAGVPGEAVAAYERAVQLNPKSVNALRALAAGLSANGQEPSAVETLQRALRLAPA---- 539

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             I      + +   G    +     +++ L  +    S   A+ L    +   A   L+
Sbjct: 540 DPITWYRYGMLDFAMGRASDAAIKVRKAIALDPSLPEQSRGLAEILAKMGQPDAARAALD 599

Query: 285 KIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +  + +P+ + A                      +  ++       L  ++   +     
Sbjct: 600 EALRTDPYDDAAWNLAGRVLTEKGEMSEAFYDFQKAIQLRPGYAPHLYDLALALVRADRF 659

Query: 342 DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +A  +A  A+   P       LLA +        +    + + AL   PD
Sbjct: 660 AEAQDRAEAALLADPNMADAHQLLAGLFARKQQLPEAAREY-RRALELRPD 709



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 86/261 (32%), Gaps = 12/261 (4%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-- 188
            +      A    E  +Q+      A+ +L       G   SA     +AL ++P  P  
Sbjct: 484 QSAGVPGEAVAAYERAVQLNPKSVNALRALAAGLSANGQEPSAVETLQRALRLAPADPIT 543

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W    ++   +       AI        +     ++R       +   A  G   A+   
Sbjct: 544 WYRYGMLDFAMGRAS-DAAIKVRKAIALDPSLPEQSR-----GLAEILAKMGQPDAARAA 597

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIAN-IYTHLLSE 305
             E+L+       A   A + L  + +  +A    +K  ++ P   P + +     + ++
Sbjct: 598 LDEALRTDPYDDAAWNLAGRVLTEKGEMSEAFYDFQKAIQLRPGYAPHLYDLALALVRAD 657

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364
                  RA      +    ++  +++ +      + +A  +   A+++ P    + L L
Sbjct: 658 RFAEAQDRAEAALLADPNMADAHQLLAGLFARKQQLPEAAREYRRALELRPDWSRVHLQL 717

Query: 365 AQIEQANSHNTDKILYWTQSA 385
             +  A    T    +  ++A
Sbjct: 718 GNVLAAQGDITGAAEHLREAA 738



 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 65/185 (35%), Gaps = 18/185 (9%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A  AL ++     V +  +     A      +  L ++    K  N   A   +      
Sbjct: 437 AENALYLA-----VAQVGLANNAQAG-----LPVLAREIARQKPGN---AEFYLVLGKGW 483

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              G    +      +++L   S+ A    A  L +  ++  A   L++  ++ P  +  
Sbjct: 484 QSAGVPGEAVAAYERAVQLNPKSVNALRALAAGLSANGQEPSAVETLQRALRLAPA-DPI 542

Query: 297 NIYTHLLSENTVGKLK----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             Y + + +  +G+      +  +   ++    E    +++I  +MG  D A A    A+
Sbjct: 543 TWYRYGMLDFAMGRASDAAIKVRKAIALDPSLPEQSRGLAEILAKMGQPDAARAALDEAL 602

Query: 353 KIAPR 357
           +  P 
Sbjct: 603 RTDPY 607



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 62/207 (29%), Gaps = 10/207 (4%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLE 144
           +AL  GL +    N      + +          + + +     +  A  +  + A +  +
Sbjct: 511 RALAAGLSA----NGQEPSAVETLQRALRLAPADPITWYRYGMLDFAMGRASDAAIKVRK 566

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +   P+  E +   L     ++G  ++A+    +AL   P          +      E 
Sbjct: 567 AIALDPSLPEQS-RGLAEILAKMGQPDAARAALDEALRTDPYDDAAWNLAGRVLTEKGEM 625

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           S A     +  +    +    A  L   +L          +   A  +L    N   A  
Sbjct: 626 SEAFYDFQKAIQLRPGY----APHLYDLALALVRADRFAEAQDRAEAALLADPNMADAHQ 681

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP 291
             A     + +  +A     +  ++ P
Sbjct: 682 LLAGLFARKQQLPEAAREYRRALELRP 708


>gi|78067219|ref|YP_369988.1| HemY-like protein [Burkholderia sp. 383]
 gi|77967964|gb|ABB09344.1| HemY-like protein [Burkholderia sp. 383]
          Length = 395

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/409 (11%), Positives = 111/409 (27%), Gaps = 45/409 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREA---------- 112

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                           N     L          E+     +       +   A+  A   
Sbjct: 113 -----------LSVDANQGAASLVAATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAAD 161

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +           A +       +   A     + ++  K W     +       E     
Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221

Query: 241 DMIASYHDAIESL----KLCDN--------SIMA-------SICAAKSLISQNKKRKAEV 281
             +     A E+L    +   +                   +  AA  L+   ++ +A  
Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPVERQSPRLADLAADLLVPLERRNEARR 281

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           I+E     N    +   Y      + +  +++A   ++ + E  + L  + ++  +    
Sbjct: 282 IVEDALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLW 341

Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +A +    A+K+A  +         LA++ +          ++ +SAL
Sbjct: 342 GKAQSFLESALKLADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|297833104|ref|XP_002884434.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330274|gb|EFH60693.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 89/269 (33%), Gaps = 21/269 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A +  + V Q++    + L  L+       +          E +   P  +    
Sbjct: 67  GDFKQALEHSNMVYQRNPLRTDNL-LLIGAIYYQLQEYDMCIARNEEALRIQP--QFAEC 123

Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           Y     +    GD + A RY   A+++ P+       +   Y+    +S A     Q   
Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRFSEATQCCQQALS 183

Query: 217 NAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 + + N   L+ A+ L +        +Y   +E++++     +A    A   +  
Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIH-------EAYSCYLEAVRIQPTFAIAWSNLAGLFMES 236

Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
               +A    ++  K+ P  P+    + N+Y  L        +       ++      + 
Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKAL--GRPTEAIMCYQHALQMRPNCAMAF 294

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             ++ I  E G +D A      A+   PR
Sbjct: 295 GNIASIYYEQGQLDLAIRHYKQAISRDPR 323



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 20/189 (10%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA---VYSLYFESCRIGDLNSAQRYA 177
           L  L++ Q        + A+      ++I  T   A   +  L+ E    GDLN A +Y 
Sbjct: 195 LGNLMKAQ-----GLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFME---SGDLNRALQYY 246

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+ + P  P     +   Y      + AI       +       N A+     +    
Sbjct: 247 KEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRP----NCAMAFGNIASIYY 302

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE-- 294
           ++G +  +     +++      + A      +L    +  +A     +   + P HP+  
Sbjct: 303 EQGQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGRVDEAIRCYNQCLALQPNHPQAM 362

Query: 295 --IANIYTH 301
             + NIY  
Sbjct: 363 ANLGNIYME 371


>gi|187478787|ref|YP_786811.1| protoheme IX synthesis protein [Bordetella avium 197N]
 gi|115423373|emb|CAJ49907.1| putative protoheme IX synthesis protein [Bordetella avium 197N]
          Length = 518

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/368 (13%), Positives = 107/368 (29%), Gaps = 14/368 (3%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           +P +V I         S  + + +L     A  +   V  + ++ P  +     +R   +
Sbjct: 24  HPGNVLILVSPWRIEVSLTLAVLLLVALFAALYVGLRVLAWLVAIPDRVRAWRGRRAQAR 83

Query: 84  GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNI 138
            ++ L  G +S+       A K +   + Q        L  L   +     +  ER+  +
Sbjct: 84  DHELLERGWISLLEGRFSHAGKDLVKLLEQTKEPGRRVLAALSAARAEHGLSEFERRDQM 143

Query: 139 AHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             +  E   +      AT   A   L  +      L                   +  A 
Sbjct: 144 LAKAREEAGEDAGLQEATATVAADMLLDQGQPARALEVLAPLQDGGARHLHTLRLLLRAE 203

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                  + +  A     +   N  E     A L+ +             ++    + LK
Sbjct: 204 TALGHQERVFVLARGLARRNALNKTEA----AQLIDSSGAARLRAALGSDAWRGIWKDLK 259

Query: 255 LCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
             + ++   ++  A +  +     +A  +LE       +  +   Y    +E    +L +
Sbjct: 260 ADERTLPNIALAGAAAFEAAGDHNEAARVLEAAIAQKFNHTLVAAYARCDAEQVPRRLAK 319

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
           A    +      E L  +  + L      QA       +      +   LL  +    + 
Sbjct: 320 AETWLQQRPADAEMLTALGLLCLNGQLWGQAERYLQRGVSRRNDAQTHALLGSLYDRLNR 379

Query: 374 NTDKILYW 381
            +D   +W
Sbjct: 380 PSDAARHW 387


>gi|307136430|gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]
          Length = 727

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/300 (19%), Positives = 104/300 (34%), Gaps = 43/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + + + E L+ +L+      P      +     E    GD+ +A+    +A   
Sbjct: 358 AAQLE-KSHGSRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARSILQEAYAA 415

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK---- 239
            P++  +  A  +      E  RA   L + ++            ++ R L NA++    
Sbjct: 416 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNAEEESKL 475

Query: 240 ---------------------GDMIASYHDAIES----LKLCDNSIMASICAAKSLISQN 274
                                 + +     A E+    LK C + I   +  A      N
Sbjct: 476 LSEGLKRFPSFFKLWLMLGQLEERLKHLEKAKEAYESGLKHCPSCIPLWLSLAHLEEKMN 535

Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332
              KA  +L    K NP  PE+    + + +E   G  K A  L     +E   S ++ +
Sbjct: 536 GLSKARAVLTMARKKNPQNPELWL--SAVRAELRHGHKKEADILMAKALQECPNSGILWA 593

Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             ++EM    Q   K+M A+K       +   +A++   +    DK   W   A+   PD
Sbjct: 594 -ASIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWYDRK-VDKARSWLNRAVTLAPD 651


>gi|256810018|ref|YP_003127387.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
 gi|256793218|gb|ACV23887.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
          Length = 317

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 89/251 (35%), Gaps = 24/251 (9%)

Query: 94  SIAAHNIPLARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++   +     K   Y+ + Q    N  LV  ++  +   +     A +  E +  I  T
Sbjct: 19  ALECADKGNFDKALEYLEKVQKVDKNNPLVLYIKGIVLKLKGDIEDAVKYFEYLETIEKT 78

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALD------ISPDAPWVTEAVVQQYVLAKEWSR 206
              ++ +L   +   G+     +Y  K         +SP      +A++  Y+   E+ +
Sbjct: 79  SLLSLGNLICLTFVKGEYEKTLKYIDKLSKLSNSCYLSPFH----KALI--YMEFGEYDK 132

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+  L++  K           +L  +++   + G +  +   A + LK+  N        
Sbjct: 133 ALEVLDEFLKIYPNLTS----ILREKAIILENLGRLDEALECANKILKIRRNDAYVWYLK 188

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP---H--PEIANIYTHLLSENTVGKLKRALRLEEIN 321
            + L      ++A   L+    +N    H   +IA  Y  L + N    L    +  E  
Sbjct: 189 GRILKKLGNIKEALDALKIAINLNENLIHVYKDIA--YLELANNNYEDALSHINKYLEKY 246

Query: 322 KESVESLVIVS 332
              VE+   ++
Sbjct: 247 PNDVEAKFYLA 257


>gi|294627364|ref|ZP_06705949.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598319|gb|EFF42471.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 690

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 70/221 (31%), Gaps = 8/221 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A + +  +PD       +        + + A+  ++     A E 
Sbjct: 6   LQALRRNAADDAVALAREWVTNAPDHAAAHRWLALALQQQGQPALALDSIDTALTLAPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+         L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRITALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +        L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378
                A       +++ P        +AQ+ Q      D +
Sbjct: 182 EHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDAV 222



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 16/292 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  + S  +       +  ++LL     LA R  + A   L  +  +   +  A   
Sbjct: 46  GQPALALDSIDTALTLAPEDADLHLLRAGALLATRDLSAADAALSRITALDPNQFNAYVM 105

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217
               +   GDL+ A+R +  A  ++P+ P     + VV+      +  RA++ L +  + 
Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMR--RGQDDRALSLLTRAAEQ 163

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +     A +L +       K     +       ++L           A+    Q +  
Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLD 219

Query: 278 KAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            A   ++ +    P  ++  +        L +                      +L  + 
Sbjct: 220 DAVAAMQGV-LDQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALL 278

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
                +G++D A      A+  +       L  LA            I  W 
Sbjct: 279 TAWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330


>gi|190150333|ref|YP_001968858.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|189915464|gb|ACE61716.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
          Length = 416

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   +     +S     V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLLLASLIVGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +   F       ++    R + K  +    GLM ++  +   A K+ S  ++     +E 
Sbjct: 61  IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           ++ L++  + A        A++                  L   +   G  N A   A  
Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160

Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            + +     P A    +++++        +  +       K++K +N    IL
Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210


>gi|325925237|ref|ZP_08186645.1| Tfp pilus assembly protein PilF [Xanthomonas perforans 91-118]
 gi|325544358|gb|EGD15733.1| Tfp pilus assembly protein PilF [Xanthomonas perforans 91-118]
          Length = 690

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A + +  +PD       +        +   A+  ++       E 
Sbjct: 6   LQALRRNAADDAVALAREWVTNAPDHAGAHRWLALALQQQGQPVLALDSIDTALTLTPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      S  L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +   ++   L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGHSDRALALLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 182 EHFAFAERAFERVIELNP 199



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 80/280 (28%), Gaps = 14/280 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           +       +  ++LL     LA R  + A   L     +   +  A       +   GDL
Sbjct: 57  TALTLTPEDADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDL 116

Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + A+R +  A  ++P+ P     + VV+      +  RA+  L +  +   +     A +
Sbjct: 117 DEAERLSRTAARLAPEHPQLLAVDGVVEMRRGHSD--RALALLTRAAEQLPD----DARV 170

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284
           L +       K     +       ++L           A+    Q +   A      +LE
Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +     P          L +                      +L  +      +G++D A
Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGAVDDA 290

Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
                 A+  +       L  LA            I  W 
Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330


>gi|218887935|ref|YP_002437256.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758889|gb|ACL09788.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 807

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 7/199 (3%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             G+          AR+       +       L  L    +  +E +   A +     L+
Sbjct: 612 SLGVCMAGLGRHSEARRHFGEALARKPGDPMALYNL--GTVCQSEGEAAEARDCFRKCLR 669

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                 +A+  L   +        A++Y TKA  +   A      + +  +       A 
Sbjct: 670 NAPGHVYALIRLGQLAEGEKRFAQARQYYTKAAKLDGGAALTCRHLARLCMRQGRPDEAR 729

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAA 267
             L++   +        AI L   +    D G D   +   A +S+ L  +     +  A
Sbjct: 730 EHLHEALLHNP----QDAIALQLMARLYLDGGEDPEIAEVMARQSVALRPDLKQGWLELA 785

Query: 268 KSLISQNKKRKAEVILEKI 286
           ++L  + +   A   L + 
Sbjct: 786 RALQVRGRDHDAREALLRA 804



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 63/212 (29%), Gaps = 29/212 (13%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +++ A       L        A+Y+L       G+   A+    K L  +P   +    
Sbjct: 621 GRHSEARRHFGEALARKPGDPMALYNLGTVCQSEGEAAEARDCFRKCLRNAPGHVYALIR 680

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + Q     K +++A  +  +  K     +   A+     +     +G    +     E+L
Sbjct: 681 LGQLAEGEKRFAQARQYYTKAAK----LDGGAALTCRHLARLCMRQGRPDEAREHLHEAL 736

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVG 309
                  +A    A+  +   +                 PEIA +       L  +   G
Sbjct: 737 LHNPQDAIALQLMARLYLDGGED----------------PEIAEVMARQSVALRPDLKQG 780

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L+ A  L+   ++         +  L  G  
Sbjct: 781 WLELARALQVRGRDHD-----AREALLRAGER 807



 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 93/344 (27%), Gaps = 41/344 (11%)

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL---EV 127
            L  +  +    +G  A    LM+        A+     +  Q       L  L+     
Sbjct: 448 ALIRLSDEGREPEGRAAHPEQLMA------EAAQLCRDLLGPQALGGRYGLNSLIFFHPG 501

Query: 128 QIALAERQYNIAHEKLEMMLQIPATRE-----FAV----YSLYFESCRIGDLNSAQRYAT 178
             A        A E    +      R        V    Y  Y ++  + +   A  YA 
Sbjct: 502 MTADGTEGAQGARETYAALCDELERRLRIGAAVGVACHPYLSYRKADALENCLKALEYA- 560

Query: 179 KALDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
             L  +P    +    +           +   AI     K     +     A   +   +
Sbjct: 561 -MLLPAPRVGVLDSLALNISADKRYSLGDTFGAIE--EYKLALLADEGNTMAWNSLGVCM 617

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                G    +     E+L       MA         S+ +  +A     K  +  P   
Sbjct: 618 AGL--GRHSEARRHFGEALARKPGDPMALYNLGTVCQSEGEAAEARDCFRKCLRNAP--- 672

Query: 295 IANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
             ++Y  +         KR         +  +++  +  +   ++++ +  G  D+A   
Sbjct: 673 -GHVYALIRLGQLAEGEKRFAQARQYYTKAAKLDGGAALTCRHLARLCMRQGRPDEAREH 731

Query: 348 AMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
              A+   P       L+A++   +     +I         A+ 
Sbjct: 732 LHEALLHNPQDAIALQLMARL-YLDGGEDPEIAEVMARQSVALR 774


>gi|254229658|ref|ZP_04923069.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25]
 gi|151937857|gb|EDN56704.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25]
          Length = 287

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 63/318 (19%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L      +  +     + A +  E +++ P          Y E+                
Sbjct: 4   LALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---------YKEA---------------- 38

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---IARSLENA 237
                      + +V  Y   +EW +AI + NQ  K   + +R RA +       ++ + 
Sbjct: 39  ---------ALQQLVTIYQQTREWEKAIYYANQLAKLGNKRSRMRANIAHFWCEIAMLDQ 89

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK----KRKAEVILE--KIWKVNP 291
             G+   +     ++L      + ASI   +  +         +    +LE  K +  + 
Sbjct: 90  ADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLESEDYKHTIKYLTGVLEQDKDFISDV 149

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            P IA  Y HL  E+ + +  RA  +++    S E  ++++++     ++  A       
Sbjct: 150 LPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE--LMLAQLVAHHENVGAAQELLTKQ 206

Query: 352 MKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQSALHAMPD------PLWISDDGYLSS 403
           +   P  + F  L    I +A      +        L AM        P +       S+
Sbjct: 207 LLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS-TLQAMVGEQLKVKPHYRCRKCGFST 262

Query: 404 V---WLPLSPISKTLCYF 418
               W    P  K     
Sbjct: 263 HSLYWH--CPSCKGWGTI 278


>gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 733

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 14/204 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 Q + A +  E  + I      A  +L      +G L++A +   KA+ I PD  
Sbjct: 84  TLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQDLGQLDAAVKSYEKAIAIKPDFS 143

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   A+    +      ++    A   +  +L+N   G + A+   
Sbjct: 144 DANNNLGIALKNLGQLDAAVECYKKALAIKPDY--AEAHYNLGNALKNL--GQLDAAVEC 199

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             ++L +  +   A      +L +  +   A    EK   +   P+ A  Y +  + + +
Sbjct: 200 YKKALAIKPDYADACNNLGNALKNLGQLDAAVKCYEKAVAIK--PDYAEAYHN--NGSVM 255

Query: 309 GKLKRA-LRLEEINKESVESLVIV 331
            +LKR    L        ES + +
Sbjct: 256 RRLKRQDEALAS-----YESAIAI 274



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 13/199 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             IG+L+ A +   KAL I PD   V   + +    L  +   A+    +      ++  
Sbjct: 52  KTIGELDEAVKSFEKALAIKPDYAEVHYNLGLTLQDL-GQLDAAVKSYEKAIAIKPDY-- 108

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A       +   D G + A+     +++ +  +   A+     +L +  +   A    
Sbjct: 109 --ANACNNLGVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECY 166

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +K   + P     H  + N   +L   +    ++   +   I  +  ++   +      +
Sbjct: 167 KKALAIKPDYAEAHYNLGNALKNLGQLDAA--VECYKKALAIKPDYADACNNLGNALKNL 224

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G +D A      A+ I P 
Sbjct: 225 GQLDAAVKCYEKAVAIKPD 243


>gi|255020673|ref|ZP_05292735.1| TPR repeat-containing protein [Acidithiobacillus caldus ATCC 51756]
 gi|254969909|gb|EET27409.1| TPR repeat-containing protein [Acidithiobacillus caldus ATCC 51756]
          Length = 541

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 8/244 (3%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
               E L YLL  + A  +    +A    +  +++       + +    + R GD + A 
Sbjct: 19  ALGGETLYYLLTAEFATTQGVAEVALPAWQKAVELAPQANV-LAAATKAATRFGDRSDAL 77

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           R+A    + +PD P          +   E  +AI  L        E     A +    + 
Sbjct: 78  RWARLWRETAPDDPEAARFEAALLLAEGEDQKAIALLQATLARFPE----DATVTEQLAA 133

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--- 291
             A+ G    +     + ++   +S  A     +  +++N+ ++A   L +   + P   
Sbjct: 134 LLAEHGRRGDAERLLQDFVQHHPDSASAYFNLGRVYLTENRPQEAITALRRASTLQPDDG 193

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           H  IA        +     L+        +   +++   ++ + L++G  +QA       
Sbjct: 194 HIAIALAEALRQQQGPTAALQSIQAFTAHHPGDLDAQRYLAALYLQVGGQEQAMRVLQKL 253

Query: 352 MKIA 355
            +  
Sbjct: 254 TRDD 257


>gi|297262050|ref|XP_001101625.2| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           [Macaca mulatta]
          Length = 882

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L        D   A+ Y  KAL + P 
Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLIR---DTAEAKMYYQKALQLHPQ 546

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 607 AGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L   + AL   
Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDVIEKALQLK 781

Query: 389 MPDP 392
             DP
Sbjct: 782 PKDP 785


>gi|161830756|ref|YP_001597814.1| hemY protein [Coxiella burnetii RSA 331]
 gi|161762623|gb|ABX78265.1| hemY protein [Coxiella burnetii RSA 331]
          Length = 392

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/379 (12%), Positives = 114/379 (30%), Gaps = 42/379 (11%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++     + I + +    T+ +  +  L      + ++F +          +      + 
Sbjct: 21  MTRDTGYLLIVYRHWSIETTLWAAILSLLILFILFYIIFRLLGRAARLSKNIHRWRKMKQ 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
           Y +  +    GL  +A    P A +K+              LV  L    A   +Q    
Sbjct: 81  YRRARQLTTAGLCELAEGRWPSAEQKLVKGAK----ITKNPLVNYLAAAQAANAQQSYER 136

Query: 140 HEKLEMML---------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            +    +           +  T+                   A     +    +P+    
Sbjct: 137 RDNYLRLAHTKAKGSDIAVDLTQS-------RLQISKNQWEQALATLERVNRANPNHACT 189

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA- 249
            + + Q YV  ++W +    L + +K   E          A +L+  +K   +     A 
Sbjct: 190 LQLLKQVYVHLQDWEKLRHLLPRLRKQKVE---------SAEALDAFEKIIYVNLLSAAD 240

Query: 250 ---IESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
               ++L        +     I        SLI  ++  KA  ++E   K   +  + + 
Sbjct: 241 RKGKQALIAMWNSFPRRSTQEIELIDVYTHSLIKYDEGDKAIPLIESALKKEWNSNLVST 300

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y     E    +L  A    +   +  E  + + +++     + +A      ++K+ P  
Sbjct: 301 YGLARGEKKTDQLTTAETWLKKYPKEPELFLCLGRLSRREKFLGKARDYLQTSIKLMPSS 360

Query: 359 EIFLLLAQIEQANSHNTDK 377
             +  L Q+ +  +     
Sbjct: 361 AAYRELGQVYEEQNQKDSA 379


>gi|303253598|ref|ZP_07339736.1| HemY protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302647518|gb|EFL77736.1| HemY protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 410

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   +     +S     V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLLLASLIVGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +   F       ++    R + K  +    GLM ++  +   A K+ S  ++     +E 
Sbjct: 61  IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           ++ L++  + A        A++                  L   +   G  N A   A  
Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160

Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            + +     P A    +++++        +  +       K++K +N    IL
Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210


>gi|226953435|ref|ZP_03823899.1| tetratricopeptide TPR_4 [Acinetobacter sp. ATCC 27244]
 gi|226835818|gb|EEH68201.1| tetratricopeptide TPR_4 [Acinetobacter sp. ATCC 27244]
          Length = 545

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 2/167 (1%)

Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R+ +  +  R+L+   +  D+ A+   A   ++     + A    +   +  ++   A  
Sbjct: 51  RSNSTTIKQRALDIALEYDDLQAALDIATHWVEQEPKDVPALFYLSHIALKTHEYELAAK 110

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340
            L+KI  ++P  ++  I   +  E    +      L     K +   L +++ +  + G 
Sbjct: 111 TLDKILNIDPTADLEQILAGIAPEQAEDREILLNALRASKEKNNPSILALIAGLEAQDGL 170

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +QA      A++   +   F+L+         + +    W   A  
Sbjct: 171 YEQALKNINRALRKRSKSTSFILMKANLLMALKDQEATQKWLARASR 217


>gi|125569818|gb|EAZ11333.1| hypothetical protein OsJ_01197 [Oryza sativa Japonica Group]
          Length = 867

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 83/248 (33%), Gaps = 25/248 (10%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLY--FESCRIGDLNSAQRYATKALDIS 184
            A  E+++        ++L    T  R   V  L    E    GD+ +AQ    +A    
Sbjct: 551 AAQLEKRHGTEESLY-ILLSKATTYNRHAEVLWLMYAKEKWLAGDVPAAQTILQEAYAYL 609

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240
           P++  +  A  +      E  RA   L++ ++            ++ R L N D+     
Sbjct: 610 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEERKLL 669

Query: 241 ----------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                        A    A +         +A++   ++ +    K++A+ +L K  +  
Sbjct: 670 EEEEKINGLRKSRAVLTMARKKNPATPELWLAAV---RAELRHRNKKEADALLAKALQEC 726

Query: 291 PHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           P    +      ++      +  ++    +        +  V+K+       D+A +   
Sbjct: 727 PTSGILWAAAIEMVP--RPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKFDKARSWLN 784

Query: 350 LAMKIAPR 357
            A+ +AP 
Sbjct: 785 RAVTLAPD 792


>gi|16082148|ref|NP_394586.1| hypothetical protein Ta1127 [Thermoplasma acidophilum DSM 1728]
 gi|10640440|emb|CAC12254.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 529

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 17/169 (10%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N++ A     ++    + GD   +  D   ++K    S+   +  A +L  +     A  
Sbjct: 22  NKDDAEEFANKAKNAVNSGDYDGAIADIERAIKASPRSVPYHLIKADALYRKGDYEDALD 81

Query: 282 IL---EKIWKVNPHPEIANI----YTHLL--SENTVGKLKRALRLEEINKESVESLVIVS 332
           +L   E I K N  PE+ ++    Y  L   +E+ +   K        +     +    +
Sbjct: 82  VLNFAETIEKNN--PELLSLKSICYGSLGKFNESKIEATKAIKA----DPNYPFAYYNRA 135

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
           K    +   D A       +++ P   + ++ LA +E     +  K L 
Sbjct: 136 KAEQYLEEYDIAKKDLQKYLEMQPNDPDAYMDLADMEYHE-GDYKKALQ 183



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 35/192 (18%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD + A     +A+  SP +               ++  A+  LN      +   +
Sbjct: 36  AVNSGDYDGAIADIERAIKASPRSVPYHLIKADALYRKGDYEDALDVLNFA----ETIEK 91

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N   LL  +S+     G    S  +A +++K   N   A    A          KAE  L
Sbjct: 92  NNPELLSLKSICYGSLGKFNESKIEATKAIKADPNYPFAYYNRA----------KAEQYL 141

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           E+        +IA               K   +  E+     ++ + ++ +    G   +
Sbjct: 142 EEY-------DIAK--------------KDLQKYLEMQPNDPDAYMDLADMEYHEGDYKK 180

Query: 344 AHAKAMLAMKIA 355
           A      A+K  
Sbjct: 181 ALQHVNTAIKKD 192


>gi|172087340|ref|XP_001913212.1| UDP-N-acetylglucosaminyltransferase [Oikopleura dioica]
 gi|42601339|gb|AAS21365.1| UDP-N-acetylglucosaminyltransferase [Oikopleura dioica]
          Length = 1070

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 7/226 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  +   Q  +T   A  +L     + GD+  A     KA+ +          
Sbjct: 185 GRLEEAEECYQKAXQCNSTXAVAYSNLGCVYNKRGDIWLAIHNFEKAVKLDVTFLDAFIN 244

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +  A+ + RA++   +        N   A++    +    ++G +  +      ++
Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310
           +L  N   A    A +L  +    +AE   E+  K++P H +  N   ++  E   T   
Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++   R  +   +   +   ++ I  + G    A      A++I P
Sbjct: 361 MELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYKQAIRIFP 406



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 47/160 (29%), Gaps = 11/160 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL + P+       +            A+    +  K   ++           +    
Sbjct: 331 EQALKLHPEHADSLNNLANIKREQNRTHEAMELYQRALKAKPDFP----AAHSNLASILQ 386

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            +G    +     +++++      A      +     + ++A    +    +N  P  A+
Sbjct: 387 QQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISIN--PNFAD 444

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332
            +++L S      NT   ++       +     E+    +
Sbjct: 445 AFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARA 484


>gi|297475073|ref|XP_002687765.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
           1-like [Bos taurus]
 gi|296487347|gb|DAA29460.1| transmembrane and tetratricopeptide repeat containing 1-like [Bos
           taurus]
          Length = 939

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             R    A    +  LQ+      A+++L            A      ++   P+     
Sbjct: 583 LTRDTTEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAY 642

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       + +  A        K   + +     L     +   D G    +     +
Sbjct: 643 SSLASLLAEQERFKEAEEIYLAGIKKCPDSSD----LHNNYGVFLVDTGFPEKAVAHYQQ 698

Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304
           ++KL  +  +A +   +   S           ++A  +  K   ++P   +  +Y +  +
Sbjct: 699 AIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTEILSP---LGALYYN--T 753

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363
                 L+       +     E  + ++++   MG   +A       +       E + L
Sbjct: 754 GRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHIVSEETGCLECYRL 813

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I        DK L     AL     DP
Sbjct: 814 LSAIHSKQEQ-HDKALDAIDKALKLKPKDP 842



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 95/286 (33%), Gaps = 43/286 (15%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +    ++A E  +  LQ+ 
Sbjct: 680 GVFLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGDNSVAEEWYKRALQVA 737

Query: 151 A-TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             T   +    LY      G    A +   +A+ + P    +  A+ Q   +  +     
Sbjct: 738 RKTEILSPLGALY---YNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQ----- 789

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICA 266
                +K  +   +     L   R L   ++ +     +     ++LKL        I  
Sbjct: 790 -TKEAEKMTSHIVSEETGCLECYRLLSAIHSKQEQHDKALDAIDKALKLKPK-DPKVI-- 845

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           ++   ++  + + + +L+K ++                              E+N +  +
Sbjct: 846 SELFFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQ 881

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           + + +  I    G+   A      A+++ P  ++    LA++++  
Sbjct: 882 AWMNMGGIQHIKGNYVSARTYYERALQLVPDSKLLQENLAKLDRLE 927


>gi|226939003|ref|YP_002794074.1| HemY [Laribacter hongkongensis HLHK9]
 gi|226713927|gb|ACO73065.1| HemY [Laribacter hongkongensis HLHK9]
          Length = 402

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 2/159 (1%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++L+ +   +  V     + +        + +       S  +++ +    L A  L+  
Sbjct: 1   MKLVLWLTALFAVAVGVSLFAGISQGYAILVFPPYRVELSLNLMVVLTIATLLALYLILR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMH-SYVSQQHTFHNE 119
                L+ P  + H   +R       AL  G ++        A +     +  +    N 
Sbjct: 61  AFGVALALPDRVRHYQRERKLGAARTALRQGALAFFEGRYQKAEREAVKSLDDEPLEDNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            L  L+  + + A +        L  +  + AT E A +
Sbjct: 121 TLALLIAARASHAMKDAEKRDAYLSRLSDLGATAELARH 159


>gi|167648925|ref|YP_001686588.1| GSCFA domain-containing protein [Caulobacter sp. K31]
 gi|167351355|gb|ABZ74090.1| GSCFA domain protein [Caulobacter sp. K31]
          Length = 533

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L+  S    D N     A +A+++ P+ P + + +   Y  A+++  A+  L +      
Sbjct: 328 LFLSSLSSTDTNERLALAKRAVELEPERPELLDHLGTLYCNAQDFEAAVGVLQRAVDLRP 387

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +W        +A +L+   +        + +  +    +S  A+   + SLI   + ++A
Sbjct: 388 DWEHRY---HLAMALQGVRRFREAGELLEVL--VVENPDSTDAATRLSHSLIILGQAQRA 442

Query: 280 EVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
              LE+     P   +    +  +    +       A +  E++  +  +  + +     
Sbjct: 443 RAFLEQRIASAPSSALYYWLSTAMGHAGDNADAALMAEKSIELDPGNPHNWYL-AGTYHA 501

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIF 361
             +          A++IAP  + F
Sbjct: 502 KANRKAPRPFFEKALEIAPDVKAF 525


>gi|301383072|ref|ZP_07231490.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060343|ref|ZP_07251884.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato K40]
 gi|302130910|ref|ZP_07256900.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato NCPPB 1108]
          Length = 1298

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 79/250 (31%), Gaps = 51/250 (20%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221
           + G L++AQ    + L      P     ++       +   A+  L+     ++    + 
Sbjct: 399 QAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQSKLGDS 458

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R +A+     +     +GD+ A+     +++K   +++      A+  +  ++  KA  
Sbjct: 459 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 518

Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302
           +++++ K  P                                   P++  +   +     
Sbjct: 519 LIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFTRIPVDQRTPDMKALADEVTMTVQ 578

Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                           L    RL+ +   S E  + ++   ++ G   +    A  A+  
Sbjct: 579 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLASAYIDAGEPARGREMARAAIAQ 638

Query: 355 APRKEIFLLL 364
           AP     L+L
Sbjct: 639 APLPSADLML 648


>gi|260060544|gb|ACX30004.1| transmembrane and tetratricopeptide repeat containing 1A [Homo
           sapiens]
          Length = 882

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781

Query: 389 MPDP 392
             DP
Sbjct: 782 PKDP 785



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 738

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870


>gi|90579445|ref|ZP_01235254.1| putative N-acetylglucosaminyl transferase [Vibrio angustum S14]
 gi|90439019|gb|EAS64201.1| putative N-acetylglucosaminyl transferase [Vibrio angustum S14]
          Length = 389

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 85/277 (30%), Gaps = 47/277 (16%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T     L      +  +     + A    E +L  P  +  
Sbjct: 83  GEVDRAIRIHQNLIARPNLTIEQRNLALQQLAKDYMVAGFLDRAERIFEQLLDEPEYK-- 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                                        P      + ++  Y   +EW  AI   +Q  
Sbjct: 141 ----------------------------KPAL----QQLLSIYQQTREWENAIDMASQLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  K   ++  A      ++      +   +     ++L      + ASI  AK  I   
Sbjct: 169 KLGKTKLKHDIAHYWCELAMLEMSAQNQDKAIQCLKKALSADKQCVRASITMAKIQIKGK 228

Query: 275 KKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           + ++A   LE        +     P +   Y  L +E+    LK   +  E    +   L
Sbjct: 229 EFKQAAKTLERILEQDAEFIGEALPLLLECYEALHNESAW--LKYLQQCVEAKAGASAEL 286

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL 364
           ++  +IA   G++  A A     ++  P     + L+
Sbjct: 287 MLADEIAKNEGAVS-AQAFMTRQLQKNPTMKGFYQLM 322


>gi|91976118|ref|YP_568777.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
 gi|91682574|gb|ABE38876.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
          Length = 773

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 32/233 (13%)

Query: 129 IALAERQY---NIAHEKL----EMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRY 176
            +  ER     + A  +         + P  R           L  E+            
Sbjct: 558 ASQPERDRVAFDRAASEFVDAQRANAERPEARTMLGNFLTQRGLMSEAEAE--------- 608

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
              AL +SP        +   Y      S     L      +       A L  A  L  
Sbjct: 609 YRAALSLSPQYATAAINLGDLYRQRGRDSEGEIVLRAALAVSP----RDAALHHALGLNL 664

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
                   +  +   +  L           A +L S  ++ +A  +L+   + +P +PEI
Sbjct: 665 TRLKRPDDALGELQRATDLEPEQPRYPYVYAVALHSSGRRAEAMTVLKGALRTHPNNPEI 724

Query: 296 ANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                    ++ +T   L  A +L  +  +  E    ++++ L++ S      
Sbjct: 725 LRALLSFTQMAGDTPAALGYAEQLAIVTPDDKE----LAEVILKLRSAATPRQ 773



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 12/158 (7%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLE---NADKGDMIASYHDAIESLKLCDNSIMASI 264
               ++      +  R  A    AR++       +G M  +  +   +L L      A+I
Sbjct: 565 RVAFDRAASEFVDAQRANAERPEARTMLGNFLTQRGLMSEAEAEYRAALSLSPQYATAAI 624

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLE 318
                   + +  + E++L     V+P     H  +    T L   ++ +G+L+RA  LE
Sbjct: 625 NLGDLYRQRGRDSEGEIVLRAALAVSPRDAALHHALGLNLTRLKRPDDALGELQRATDLE 684

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                      + +      G   +A      A++  P
Sbjct: 685 PEQPRYP---YVYAVALHSSGRRAEAMTVLKGALRTHP 719


>gi|285019845|ref|YP_003377556.1| porphyrin biosynthesis protein [Xanthomonas albilineans GPE PC73]
 gi|283475063|emb|CBA17562.1| putative porphyrin biosynthesis protein [Xanthomonas albilineans]
          Length = 421

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 131/403 (32%), Gaps = 34/403 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           LI    VI+L +     ++        +V +  G+  Y  S      +L        L+ 
Sbjct: 7   LIVLLIVIALGVIGAQWLAQEQLREFGEVIVRVGDTDYIASLPQAGLLLVIAFLLLWLIG 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            V  F             K++  +    L  GL+++       A +     +Q     + 
Sbjct: 67  NVLSFPFR---AWGRHRRKQSRAR----LIEGLVAVHNGQWTRAERQLDAAAQD---PDV 116

Query: 120 YLVYLLEV-QIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFE----SCRIGDLN 171
            ++ L+   ++A A          L  + +  A     +     L  +    +    D+ 
Sbjct: 117 SVIALIAAVRVADARGDAEALERHLHRLAERDACAHALLQAERHLDRKRPVDAINTLDVA 176

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +AQ    + L +       TEA++Q     + + +      Q+             L  A
Sbjct: 177 AAQPLPPRGLLLR------TEALIQISRADEAYGQLGAIRRQQALQLDAIAALETRLATA 230

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKIWKVN 290
              + +D   +   +    +SL+   + +   ++ AA         R  E  L+  W  N
Sbjct: 231 SLEQASDANALAERWESLPKSLRSEPDVVGTYALRAAALGWDDATLRSLEQALDTRWDEN 290

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               +A +Y  L  E    +   A R  + + ES   L+ ++++A       QA      
Sbjct: 291 ----LAALYGRLPMERYDTRRASAQRWLQDHPESAALLLTLARLARHQQQWPQAEDFLHR 346

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
           A+ +    E + +      A++ +T        +AL       
Sbjct: 347 ALTLGAGAEAWEVFGD-GYADAGDTLAAQRCYANALRVQRGEQ 388


>gi|218710034|ref|YP_002417655.1| tetratricopeptide repeat protein [Vibrio splendidus LGP32]
 gi|218323053|emb|CAV19230.1| Predicted N-acetylglucosaminyl transferase [Vibrio splendidus
           LGP32]
          Length = 392

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 54/291 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +        + A +  E +++ P  +E 
Sbjct: 84  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYTVSGFLDRAEKIFEQLVEEPDHKEG 143

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---TFLN 212
           A+                                  + +V  Y   +EW++AI     L 
Sbjct: 144 AL----------------------------------QQLVAIYQQTREWNKAIHYGNILV 169

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  K   +     A      +++    G+   +     ++L      + ASI   K  ++
Sbjct: 170 KLSKKKMKTRAMVAHFWCELAMQEQADGNRPKALQHFKKALSEDPKCVRASIALGKFYLA 229

Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKES 324
                K    LE +      +     P +A  Y  L  E      +    L+     K  
Sbjct: 230 NEDYHKTITYLESVLEQDIDFISEVLPTLAECYHKLGQE-----AQLVEFLKACIQKKAG 284

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373
           V + ++++++  +   +  A       +   P  + F  L    +E+A   
Sbjct: 285 VSAELMLAQLVADHEDVGSAQELLTKQLVKNPTMKGFYRLIDYHLEEAEEG 335


>gi|209524107|ref|ZP_03272658.1| glycosyl transferase family 2 [Arthrospira maxima CS-328]
 gi|209495482|gb|EDZ95786.1| glycosyl transferase family 2 [Arthrospira maxima CS-328]
          Length = 2819

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 71/228 (31%), Gaps = 11/228 (4%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +++ A E  +  + +         +L     ++     A     +  + SP+   V   +
Sbjct: 178 RWDEAAEAYQNAIALDKDSLILQRNLGKVLVKLSAWEDAVTLWQQVAEKSPNDSEVWHLL 237

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                 ++ WS A+           E++ +     +  +L   ++     +      ++ 
Sbjct: 238 GDALSGSERWSEAVAAYQNAIGLNPEFSGSH--NNLGDALLKLERW--SEAAEAYQNAIG 293

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVG 309
           L      +      +L+   +  +A    +    +NP     H  + +    L   +   
Sbjct: 294 LNPEFFWSHNNLGDALLKLERWSEAAEAYQNAIGLNPEFFWSHNNLGDALLKLERWSEAA 353

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +          +   S   +++  +++   + A      AM+I P 
Sbjct: 354 --EAYQNAIAWRDDLPWSHYNLAEALVKLERWEAAVKAYKRAMEIQPD 399


>gi|209525182|ref|ZP_03273725.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209494367|gb|EDZ94679.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 596

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 79/235 (33%), Gaps = 21/235 (8%)

Query: 133 ERQYNIAHEKLE-MMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +   A    +  +   P             ++ +  R  D   A     +A+ + P+ 
Sbjct: 69  AGRLEEAIGAYQQAIKLNPEDSWSYNSLG--GIFIKLERWED---AVPVCQQAIQLDPNF 123

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W    + Q     ++W  A +   +  +    +           +L   ++     +  
Sbjct: 124 FWAYNNLGQALSQQEQWEDAASVYQKASQINSTF--FWTYNNWGEALIQLERW--SEAVT 179

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302
              +++++  N   A      +L    +   A  + +K  ++NP     H  +A+   +L
Sbjct: 180 VYQKAIEIDPNFCWAYNHLGDALRHLKRWSDAVPVYQKAAEINPNFFWTHSNLADTLVYL 239

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +    +       ++N  S ++   ++K   ++  +D+A A     +++ P 
Sbjct: 240 KRFDQAIPV--YQSAIKLNPNSPQTYYKLAKCLQKVKRVDEAIAYFQKVLELKPD 292


>gi|116327854|ref|YP_797574.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330738|ref|YP_800456.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120598|gb|ABJ78641.1| Tetratricopeptide repeat-containing protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124427|gb|ABJ75698.1| Tetratricopeptide repeat-containing protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 368

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 5/158 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y+ A +      ++     FA+Y L        D + A +Y  + L+  PD   +   
Sbjct: 201 KDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHKANQYWERILEFDPDNKLIINR 260

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    E+ +A+   N+     +++       L+ ++      G    +    ++  
Sbjct: 261 YADSLRGMGEFDKALECFNKILAEGEDY-----FALLGKASSLKLIGKRDKAEEIYLDLH 315

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           K         +  +   ++ +K  +A  +LE   K  P
Sbjct: 316 KKFPMDPRPLLELSDLYVAIDKSIEAIRLLEDFQKKQP 353


>gi|301336134|ref|NP_001180380.1| transmembrane and TPR repeat-containing protein 1 isoform 1 [Homo
           sapiens]
          Length = 882

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781

Query: 389 MPDP 392
             DP
Sbjct: 782 PKDP 785



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 738

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870


>gi|299136562|ref|ZP_07029745.1| cellulose synthase operon C domain protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298601077|gb|EFI57232.1| cellulose synthase operon C domain protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 1516

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 32/321 (9%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPA 151
             +     A  M +  + +         ++   Q AL       A         +     
Sbjct: 314 ARSGGDQDASLMQALSTSRFF------SFMKTGQSALDSDDTTAAIANYRSALALKPDNP 367

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+   +    R G    A  Y  +A+ +   +      +      + E+S AI+  
Sbjct: 368 DALSALGGAF---LRTGHPKDAVPYLERAVRVDSSSSLSWRGLFLAQSQSAEFSAAISTA 424

Query: 212 NQ-----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            +     + K   +    +++     ++    + D + +   A+      + S  A+   
Sbjct: 425 ERIPVNLRTKLENDPEFLQSLAADYAAIGQQSQSDHVLTRALALAQADSDNESSTAAQLR 484

Query: 267 -AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-----TVGKLKRALRLEEI 320
            A  L++  +   A  +  +I   +   +  + ++ L+S +         L+   ++   
Sbjct: 485 YASLLLAAKRYNTASRVYRRILTTDS--DNGDAWSGLVSSDHLAGRDAEALREFRQMPAS 542

Query: 321 NK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
                 ++   L +++ I      I  A      A+KIAP   I L LA +E ++     
Sbjct: 543 VSSTEQDNPGFLSMLAGIYQSQDQISAAREALNRALKIAPSLSIRLQLASMELSSGDKQY 602

Query: 377 KILYWTQSALHAMPD--PLWI 395
            +  +    +   P     WI
Sbjct: 603 AVEEY-ARIVDEHPGSKEAWI 622


>gi|78045739|ref|YP_361914.1| hypothetical protein XCV0183 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034169|emb|CAJ21814.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 690

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A + +  +PD       +        +   A+  ++       E 
Sbjct: 6   LQALRRNAADDAVALAREWVTNAPDHAGAHRWLALALQQQGQPVLALDSIDTALTLTPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      S  L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +   ++   L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGHSDRALALLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 182 EHFAFAERAFERVIELNP 199



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 80/280 (28%), Gaps = 14/280 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           +       +  ++LL     LA R  + A   L     +   +  A       +   GDL
Sbjct: 57  TALTLTPEDADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDL 116

Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + A+R +  A  ++P+ P     + VV+      +  RA+  L +  +   +     A +
Sbjct: 117 DEAERLSRTAARLAPEHPQLLAVDGVVEMRRGHSD--RALALLTRAAEQLPD----DARV 170

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284
           L +       K     +       ++L           A+    Q +   A      +LE
Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +     P          L +                      +L  +      +G++D A
Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGAVDDA 290

Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
                 A+  +       L  LA            I  W 
Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330


>gi|325187990|emb|CCA22532.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 968

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 13/178 (7%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                     A     + +   P  R   A  +L     +IG    A      AL + P 
Sbjct: 115 ALKETGDIVGAIHFYVKAIQLHP--RFSDAYNNLAVSYMQIGQWQQAIETYKTALTLDPS 172

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +   Y     +  A +      +    +    AI     +      G + A+ 
Sbjct: 173 LVDAHSNLGNLYKAQGMYEDAKSCFTDAIRVKPTF----AIAWSNLAGVYQHSGQLDAAI 228

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299
               E+++L  + + A      +L    + + +  + +K  ++ P     H  +A+ Y
Sbjct: 229 IHYQEAIRLAPDFVDAYTNLGNALRESGRLQDSINVYKKAIRIRPDFATAHGNLASAY 286


>gi|124026676|ref|YP_001015791.1| hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961744|gb|ABM76527.1| Hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
          Length = 865

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 94/252 (37%), Gaps = 16/252 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A       ++I      A Y+L      +G L  A+    KA++I PD       
Sbjct: 92  GKLKEAELSYRKAIEIKPDYANAHYNLGNILRDLGQLKEAEISLRKAIEIKPDYAVAHSN 151

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +   A   L +  +   +     A           D   +  +     +++
Sbjct: 152 LGNVLRDLGKSKEAGLSLRKAIELNPDL----AEAYSNLGNVLRDLEKLKEAELSTRKAI 207

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLK 312
           ++  +  +A       LI  +K ++AE+ L K  ++N  P++A  Y++L +    +GKLK
Sbjct: 208 EIKPDYAVAHYNLGTILIDLDKLKEAELSLRKAIELN--PDLAEAYSNLGNVLRDLGKLK 265

Query: 313 RAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-----LL 363
            A     +  EI  +  E+   +  I   +G + +A   +  A++I P   +       +
Sbjct: 266 EAELSTRKAIEIKPDYAEAHSNLGGILSNLGKLKEAEISSRKAIEIKPDYGVAYSNLGTI 325

Query: 364 LAQIEQANSHNT 375
           L  I ++     
Sbjct: 326 LKDIGKSQEAFD 337


>gi|189235894|ref|XP_967579.2| PREDICTED: similar to AGAP006254-PA [Tribolium castaneum]
          Length = 1086

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 158 EALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYITALQYNPDLYCVRSDLG 215

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       G++  A  +  K
Sbjct: 216 NLLKA-----LGRLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 267

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 268 AVGLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 323

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      +++L  N   A    A +L  + +  +AE       ++ P H +  N 
Sbjct: 324 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLCPSHADSLNN 383

Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++  E        +L     LE    E   +   ++ +  + G +++A      A++I
Sbjct: 384 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 441

Query: 355 APR 357
            P 
Sbjct: 442 QPT 444



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 358 GQVAEAEECYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 414

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ S A+    +  +
Sbjct: 415 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQ 474

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 475 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 524



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 293 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 352

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 + + A    N   +       + A  L   +    ++G +  +    +++L++ 
Sbjct: 353 ALKEKGQVAEAEECYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 408

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 409 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDVSGAL 466

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 467 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 512


>gi|319785704|ref|YP_004145179.1| hypothetical protein Psesu_0085 [Pseudoxanthomonas suwonensis 11-1]
 gi|317464216|gb|ADV25948.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 688

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 80/265 (30%), Gaps = 42/265 (15%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G +  A   A +     PD       +      + +    I         A      
Sbjct: 9   LANGAIEQALELARQWTAAEPDLAAAHRTLAHVLARSGD----IAAALVALDLAAALAPE 64

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A +   R+L    +GD  A+     ++L L  N + A +  A+  I  ++  +A  +L 
Sbjct: 65  DAGVHHDRALLLVREGDTAAAQAALGQTLGLDPNHLPAYLAQARLAIGLDQLDEATRLLR 124

Query: 285 KIWKVNP-HPE--------------------IANIYTHLLSENT---------------- 307
              +++P HP+                    +A      L ++                 
Sbjct: 125 TASRIDPDHPQLLALDGLLALRLGNHSRALVLATSAAKALPDDPQVLSVMGFAHAAQGQL 184

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQ 366
               +   R+  +  ++     +++++    G  D+A A     +  A      LL +  
Sbjct: 185 AFAEQAFRRVAGLVPDARPLQPLLARLVAAQGRADEAAALMEPLLDEAAAPTPALLRVGG 244

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
           I        D+   W   AL A P 
Sbjct: 245 IYALQGGRHDQARQWLGRALDARPG 269



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 77/243 (31%), Gaps = 19/243 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI- 149
           G    A   +  A +    V+         L  LL  ++  A+ + + A   +E +L   
Sbjct: 175 GFAHAAQGQLAFAEQAFRRVAGL-VPDARPLQPLL-ARLVAAQGRADEAAALMEPLLDEA 232

Query: 150 --PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
             P      V  +Y  + + G  + A+++  +ALD  P       A++  +    +   A
Sbjct: 233 AAPTPALLRVGGIY--ALQGGRHDQARQWLGRALDARPGDTEALRALMALWAGTNDQEDA 290

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              L +  +                +LE               E++      + A   A 
Sbjct: 291 RATLERLLQVDP---SQSMAWAARVALEQPATAAAAEVLARWQEAM---PGHVPALEAAF 344

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS---ENTVGKLKRALRLEEINKE 323
            +               ++ +  P HP  A +   + S   E+    L RA ++ E   E
Sbjct: 345 FNADRSGDLEATRAAAARLLEAVPEHP--AALQFEVESQLVEDPDTALARARQILEAAPE 402

Query: 324 SVE 326
             E
Sbjct: 403 GAE 405


>gi|293390859|ref|ZP_06635193.1| HemY protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951393|gb|EFE01512.1| HemY protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 416

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 13/170 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++    ++   + +   +S     V I   + +   S   I +++ FF+ A  L+++
Sbjct: 1   MVRVLFLMLLLLAGLIAGPYLSGKQGYVRIETASNIIEMS---ITTLVIFFVIALALVYS 57

Query: 61  V---SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
           +      F       +    +R   K  K    GLM +   +   A K+    ++     
Sbjct: 58  IEVAISRFFRLSNNTYSWFSRRKRAKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SD 115

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
              L ++   + A        A+  L     I AT      SL  E  R 
Sbjct: 116 EPVLNFIKAAEAAQQRGDEFSANRYL-----IEATEIAGSDSLILEIART 160


>gi|86148761|ref|ZP_01067033.1| putative heat shock protein [Vibrio sp. MED222]
 gi|85833458|gb|EAQ51644.1| putative heat shock protein [Vibrio sp. MED222]
          Length = 391

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 54/291 (18%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +        + A +  E +++ P  +E 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYTVSGFLDRAEKIFEQLVEEPDHKEG 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---TFLN 212
           A+                                  + +V  Y   +EW++AI     L 
Sbjct: 143 AL----------------------------------QQLVAIYQQTREWNKAIHYGNILV 168

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  K   +     A      +++    G+   +     ++L      + ASI   K  ++
Sbjct: 169 KLSKKKMKTRAMVAHFWCELAMQEQADGNRPKALQHFKKALSEDPKCVRASIALGKFYLA 228

Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKES 324
                K    LE +      +     P +A  Y  L  E      +    L+     K  
Sbjct: 229 NEDYHKTITYLESVLEQDIDFISEVLPTLAECYHKLGQE-----AQLVEFLKACIQKKAG 283

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373
           V + ++++++  +   +  A       +   P  + F  L    +E+A   
Sbjct: 284 VSAELMLAQLVADHEDVGSAQELLTKQLVKNPTMKGFYRLIDYHLEEAEEG 334


>gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Lyngbya
           majuscula 3L]
 gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Lyngbya
           majuscula 3L]
          Length = 1427

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 66/204 (32%), Gaps = 13/204 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A +  +  +++      A  +L       G L  A     +A+ + PD       
Sbjct: 105 GELDKAVQYYQEAIKVKPDYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRVKPDYAQAYCN 164

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +     +  +   A     +  K   +  +    L          +G + A+     E++
Sbjct: 165 LGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTL----FQTQGKLDAARESYQEAI 220

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L  +   A       L  Q K  +A    ++  ++   P+ A +Y +L       + K 
Sbjct: 221 RLKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIRLK--PDFAEVYNNL-GNTLHEQCKL 277

Query: 314 ALRLEEI------NKESVESLVIV 331
              L+        N    E+ + +
Sbjct: 278 EEALQSYQQALSINPNLAEAKLAM 301



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 46/143 (32%), Gaps = 11/143 (7%)

Query: 127 VQIA-------LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            Q           + + + A E  +  +++ A    A  +L       G L++A+    +
Sbjct: 159 AQAYCNLGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTLFQTQGKLDAARESYQE 218

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + PD       +        +   A+    +  +   ++    A +         ++
Sbjct: 219 AIRLKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIRLKPDF----AEVYNNLGNTLHEQ 274

Query: 240 GDMIASYHDAIESLKLCDNSIMA 262
             +  +     ++L +  N   A
Sbjct: 275 CKLEEALQSYQQALSINPNLAEA 297



 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 80/240 (33%), Gaps = 26/240 (10%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q+   +  Y    +   ++            S++ E  +   L  A     +AL + PD 
Sbjct: 36  QVIQIQGDYQGEEKS--LLKPYNVIAIANFASIFEEKNK---LEEAVALYQQALTLKPDF 90

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             V   +   +    E  +A+ +  +  K   ++    A+          ++G +  + H
Sbjct: 91  AEVHNNLGNIFWAKGELDKAVQYYQEAIKVKPDY----AVAHNNLGNLLHNQGKLGEAVH 146

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIY--- 299
              E++++  +   A       L  Q K   A    ++  K+       H  +  ++   
Sbjct: 147 CYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTLFQTQ 206

Query: 300 --THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                  E+    ++       +  +  ++   +  I  + G +++A      A+++ P 
Sbjct: 207 GKLDAARESYQEAIR-------LKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIRLKPD 259



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 30/224 (13%)

Query: 130  ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            A    QY+ A +     ++       A +SL       G L+ +     + L I P+   
Sbjct: 818  AQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNLCQGQGQLSDSVECYQRVLTIQPNLVP 877

Query: 190  VTEAVVQQYVLAKEWSRAIT---------------------FLNQKKKNAKEWNRNRAIL 228
            V   +         W  AI                       L+ ++K A E   + A L
Sbjct: 878  VYNNLGYALQQQGNWDDAIASYQQALEIEPTCTEADVNLGNALHAQEKLALEKQAHYAQL 937

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                 +     GD+  +     +++ +  + + A       L  Q +   A    +K+ +
Sbjct: 938  NHELGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHYNLGVVLQDQGEFENAIASYQKVLE 997

Query: 289  VNPHPEIANIYTHLLSENTVGKL-KRALRLEEINKESVESLVIV 331
            +N  P    +Y +L      G++ +   +LEE      + L++V
Sbjct: 998  LN--PSYGEVYFNL------GRIYQTQKQLEEAASAYRQGLMLV 1033


>gi|312085220|ref|XP_003144592.1| U5 snRNP-associated protein [Loa loa]
 gi|307760244|gb|EFO19478.1| U5 snRNP-associated protein [Loa loa]
          Length = 970

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 36/257 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--- 223
            GD+ +++    +A   +P++  +  A V+      E+ RA   L + ++ A        
Sbjct: 650 AGDVKASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLK 709

Query: 224 -----------NRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257
                        A  L+  +LE                  + +   +     + +K C 
Sbjct: 710 SVRLEWCLEDLIAAKKLLTEALEQFPETPKLYLMMGQILQQEKNYNEARQYFSDGVKHCP 769

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--L 315
             I   I  ++   SQN+  KA   LEK    N  P+ + ++   +       LK     
Sbjct: 770 TFIPLWIWLSRLEESQNQIIKARSDLEKARLRN--PKNSELWLEAVRIEARAGLKELAQE 827

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHN 374
           RL    +E   S  + ++ A+ M        K++ A+K      ++ L +A++       
Sbjct: 828 RLARALQECEHSGRLWAE-AIFMEERHGRRTKSVDALKKCEHNADVLLAVAKLFWTERK- 885

Query: 375 TDKILYWTQSALHAMPD 391
             K   W Q  +   PD
Sbjct: 886 IRKAREWFQRTVKIDPD 902



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 88/253 (34%), Gaps = 15/253 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTE 192
           +    A +    +             +  E  +   +  A+ + A +A + +        
Sbjct: 537 KDAVDAEKANCRLTSQAIISHVLGIGVEEEDRKHTWMEDAESFVAQEAYECARAVY--AH 594

Query: 193 AVVQQYVLAKEWSRA---------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           A++        W  A             +Q  + A E       L +  +      GD+ 
Sbjct: 595 ALLVFPTKKGIWFAAAHFERNHGTTESYDQLLQKAVEKCPKAETLWLMYAKSKWLAGDVK 654

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           AS      + +   NS    + A K     N+ ++A  +LEK  ++ P P I      L 
Sbjct: 655 ASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLKSVRLE 714

Query: 304 --SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360
              E+ +   K      E   E+ +  +++ +I  +  + ++A       +K  P    +
Sbjct: 715 WCLEDLIAAKKLLTEALEQFPETPKLYLMMGQILQQEKNYNEARQYFSDGVKHCPTFIPL 774

Query: 361 FLLLAQIEQANSH 373
           ++ L+++E++ + 
Sbjct: 775 WIWLSRLEESQNQ 787



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 12/202 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++  A+K+         F     +YL+  QI   E+ YN A +     ++   T      
Sbjct: 719 DLIAAKKL--LTEALEQFPETPKLYLMMGQILQQEKNYNEARQYFSDGVKHCPTFIPLWI 776

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L         +  A+    KA   +P    +    V+    A     A   L +  +  
Sbjct: 777 WLSRLEESQNQIIKARSDLEKARLRNPKNSELWLEAVRIEARAGLKELAQERLARALQEC 836

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +   R  A  +                   ++++LK C+++    +  AK   ++ K RK
Sbjct: 837 EHSGRLWAEAIFMEERH--------GRRTKSVDALKKCEHNADVLLAVAKLFWTERKIRK 888

Query: 279 AEVILEKIWKVNPHPEIANIYT 300
           A    ++  K++  P+  + + 
Sbjct: 889 AREWFQRTVKID--PDFGDAWA 908


>gi|257093625|ref|YP_003167266.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046149|gb|ACV35337.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 925

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 17/305 (5%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +    +    + +   N+  A++            +     +    I  A  +Y+ A 
Sbjct: 129 EARADVLVSQAFVHLFTGNVEAAKQTVQQA--FEASPDYPRAAIARAVITGAAGEYDAAS 186

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
             ++ +L        A+ +    +   GDL  A +       + P         +     
Sbjct: 187 LAIDQVLSRQPKSVEALRAKASIAQSKGDLAGAIQALQALTQVRPSDVAAHYTAIMLLWQ 246

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A     A   L    + A+E  R   +L    +L      D+  +      +LK     +
Sbjct: 247 AGRVDDARAQLAAMVEAAEEHPRTEHVL----ALMAIRDRDLNEARDHVALALKGDPEFV 302

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-- 318
              + +        +   AE  L K+   NP   +      +       +L+RAL L   
Sbjct: 303 PTLLLSGTLNAEMGEYELAEKDLSKVLMRNPG-NLPAQQALIGVLLRTQRLERALALAQE 361

Query: 319 --EINKESVESLVIVSKIALEMGSIDQAH---AKAMLAMKIAPRKEIFLLLAQIEQANSH 373
                 E   +L + + + L+ G   +A     +A       P+    L LA++      
Sbjct: 362 MVARAPEEPRALSVAAMVYLKAGDAKKAQSLFEQANALGGKTPKALTGLALARLA---GG 418

Query: 374 NTDKI 378
           +  + 
Sbjct: 419 DAGQA 423



 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 99/307 (32%), Gaps = 13/307 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            LM+I   ++  AR                   LL   +     +Y +A + L  +L   
Sbjct: 275 ALMAIRDRDLNEAR--DHVALALKGDPEFVPTLLLSGTLNAEMGEYELAEKDLSKVLMRN 332

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A  +L     R   L  A   A + +  +P+ P         Y+ A +  +A + 
Sbjct: 333 PGNLPAQQALIGVLLRTQRLERALALAQEMVARAPEEPRALSVAAMVYLKAGDAKKAQSL 392

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             Q      +  +     L   +L     GD   + +  +E+  +    + A +      
Sbjct: 393 FEQANALGGKTPK----ALTGLALARLAGGDAGQAINVLMEASAVDAAGVEADVLLVNHF 448

Query: 271 ISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           +   +  KA  +L  + +  P       +              ++    R  E+  + + 
Sbjct: 449 VGSKQFDKALEVLAIMARKRPGDARILTLEGEVLIAAGRRAEARVA-FERAYELRPDLIT 507

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +L  + ++ L  G  ++A  +   A+   P    + L  A+    +    D +    + A
Sbjct: 508 ALRHLGRLDLADGKPERAKKRFEDAVAGRPKDASVLLAYAEWLNDSKSEPDSVRATIEKA 567

Query: 386 LH-AMPD 391
           +  A  D
Sbjct: 568 VAVAPTD 574



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 79/259 (30%), Gaps = 14/259 (5%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A +  + M      +      L     R G  + A     KA++++P +P +   +   
Sbjct: 597 AAEQATKAMPASARLQTV----LGELQIRAGKADLAAATLAKAIELAPASPELLVRLADL 652

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +       A   L +       +      L    +  +        +   A E  K   
Sbjct: 653 QLAGGAVDAAKGSLRKALTLRPGFRPATVRL----AALDQQPARPADAIEAARELQKSQP 708

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRAL 315
           +  +      K+L+ Q K  +A  +L+   + +  P++  A     + S       + A 
Sbjct: 709 SDPIGYFLEGKALVQQEKWPEAIRVLKAGIERSNSPQLVVALHSALVKSGRAEEASRAAA 768

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
              + + + V     ++ +AL       A      + + +         LA    A    
Sbjct: 769 DWIKAHPKDVVVRSYLADLALAARDYPAAVRIYKDVVVDVPNNLRALNNLA--WAAGRAG 826

Query: 375 TDKILYWTQSALH-AMPDP 392
               L + + A   A  DP
Sbjct: 827 DPMALDYAERASRLAPEDP 845



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
              +E  + +  T   A  SL        D ++A   A +A    P +  +   + +  +
Sbjct: 561 RATIEKAVAVAPTDVNARLSLVAFHASRRDFDAAMVAAEQATKAMPASARLQTVLGELQI 620

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A +   A   L +  + A         LL+  +      G + A+     ++L L    
Sbjct: 621 RAGKADLAAATLAKAIELAPASPE----LLVRLADLQLAGGAVDAAKGSLRKALTLRPGF 676

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
             A++  A                                           ++ A  L++
Sbjct: 677 RPATVRLAAL-------------------------------DQQPARPADAIEAARELQK 705

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                     +  K  ++     +A       ++ 
Sbjct: 706 SQPSDPIGYFLEGKALVQQEKWPEAIRVLKAGIER 740



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 5/129 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             +ALA R Y  A    + ++        A+ +L + + R GD   A  YA +A  ++P+
Sbjct: 785 ADLALAARDYPAAVRIYKDVVVDVPNNLRALNNLAWAAGRAGDPM-ALDYAERASRLAPE 843

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P V + +    V   + +R    L +    A      R    +  +      GD   + 
Sbjct: 844 DPKVLDTLGWILVERGDLARGTDILRRASTAAPNAPDLR----LNLAKALIKSGDAKGAR 899

Query: 247 HDAIESLKL 255
            +     KL
Sbjct: 900 RELEVLAKL 908


>gi|270264222|ref|ZP_06192489.1| cellulose synthase subunit [Serratia odorifera 4Rx13]
 gi|270041871|gb|EFA14968.1| cellulose synthase subunit [Serratia odorifera 4Rx13]
          Length = 1146

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 104/330 (31%), Gaps = 35/330 (10%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
                N  +        L +    N     +     +      +E          AL   
Sbjct: 305 YSRAGNRPQALSLFRQALQADKGGNNSSKWQSLIKSNAYWLAIDE-------GDKALKAG 357

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
              +A +K +   QI      A   L   +    D  +A+RY  +AL + P        +
Sbjct: 358 NLALAQQKYQQAGQIDGRDSSAALGLGDVAVARKDDAAAERYYQQALRLEPGNGSAVRGL 417

Query: 195 VQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           V  Y       +A+ +LN     Q+ K     +  +  +L  ++ + A +     +    
Sbjct: 418 VNIYQRQSP-EKALAYLNSLPRSQQNKLRSTLDGLQLDMLKQQADDLAGQQQWHQAAEKY 476

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYTHLLSENTV 308
             +  +  + +  +   A++L    + ++A+ +  +   K   +P+ A  Y   LS +  
Sbjct: 477 RRAQLMDPDDVWLTYHYAQTLRQAGQPQQADALFSRLAQKQRDNPQQAYAYALYLSGSDR 536

Query: 309 GK--LKRALRL--EEINKESVE--------SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +  L +   L   + N    E        +++  ++     G    A A      +   
Sbjct: 537 DRQALAQLNTLPAAQWNDNMRELAQRLKMQAMLEQAERLRAAGDEPGAVAYLR---RQPA 593

Query: 357 RKEIFLLLAQ--IEQAN----SHNTDKILY 380
              I L LA   + +        +  ++  
Sbjct: 594 DTRIDLQLADWALARGEYDAALADYQRVRA 623



 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 54/396 (13%), Positives = 114/396 (28%), Gaps = 80/396 (20%)

Query: 69  PAMLFHMLHKRNYDKG----------------YKALYTGLMSIAAHNIPLARKMHSYVSQ 112
           P  L         DKG                + A+  G  ++ A N+ LA++ +    Q
Sbjct: 312 PQALSLFRQALQADKGGNNSSKWQSLIKSNAYWLAIDEGDKALKAGNLALAQQKYQQAGQ 371

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
                +   + L    +A+A +    A    +  L++      AV  L     R      
Sbjct: 372 IDGRDSSAALGL--GDVAVARKDDAAAERYYQQALRLEPGNGSAVRGLVNIYQRQS-PEK 428

Query: 173 AQRY------------------------ATKALDISPDAPWVTEAVVQQYVLAKE----W 204
           A  Y                          +A D++    W   A   +     +    W
Sbjct: 429 ALAYLNSLPRSQQNKLRSTLDGLQLDMLKQQADDLAGQQQWHQAAEKYRRAQLMDPDDVW 488

Query: 205 -----------------SRAI-TFLNQKKKNAKEWNRNRAILLIA--RSLENADKGDMIA 244
                            + A+ + L QK+++  +     A+ L    R  +   + + + 
Sbjct: 489 LTYHYAQTLRQAGQPQQADALFSRLAQKQRDNPQQAYAYALYLSGSDRDRQALAQLNTLP 548

Query: 245 SYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHP-----EIANI 298
           +        +L     M ++   A+ L +   +  A   L    +  P       ++A+ 
Sbjct: 549 AAQWNDNMRELAQRLKMQAMLEQAERLRAAGDEPGAVAYL----RRQPADTRIDLQLAD- 603

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APR 357
           +     E     L    R+      + ++ +   +  +  G + +A  +     +   P 
Sbjct: 604 WALARGEYDAA-LADYQRVRAREPNNPDARLGEIEAYVAQGKLSEARQRLQTEPQAPEPS 662

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                 +A    A          +T+    A  +P 
Sbjct: 663 SNSGRRMANAWYAVGEPQKASDIFTRLKTAAQQEPA 698



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 74/233 (31%), Gaps = 25/233 (10%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEV-----Q 128
             +    + Y  L   + +  A     A      V            L   L V     Q
Sbjct: 184 FSQDRDAQAYDLL-QKVAADPAGRGDAADLWLEKVKAMPVSPQSVAALNRFLGVFETGDQ 242

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 +  +A +  + +L  P T    V  L       G   +A     KAL  SP+  
Sbjct: 243 A--VSARQELARQ--QALLSDP-TYLARVRGLAQ--VDKGGSRAAIPELKKALAASPNDA 295

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAI-------LLIARSLENAD 238
            V  A+ Q Y  A    +A++   Q  +        ++ +++       L I    +   
Sbjct: 296 EVLGALGQAYSRAGNRPQALSLFRQALQADKGGNNSSKWQSLIKSNAYWLAIDEGDKALK 355

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            G++  +     ++ ++      A++      +++     AE   ++  ++ P
Sbjct: 356 AGNLALAQQKYQQAGQIDGRDSSAALGLGDVAVARKDDAAAERYYQQALRLEP 408



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 40/142 (28%), Gaps = 12/142 (8%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L + +   A      A   L                L   +   G+ ++A     +  
Sbjct: 567 AMLEQAERLRAAGDEPGAVAYLRRQPADTRIDLQ----LADWALARGEYDAALADYQRVR 622

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------WNRNRAILLIARS 233
              P+ P      ++ YV   + S A   L  + +  +          N   A+    ++
Sbjct: 623 AREPNNPDARLGEIEAYVAQGKLSEARQRLQTEPQAPEPSSNSGRRMANAWYAVGEPQKA 682

Query: 234 LENADKGDMIASYHDAIESLKL 255
            +   +    A    A ++  L
Sbjct: 683 SDIFTRLKTAAQQEPAGQAKAL 704


>gi|121997361|ref|YP_001002148.1| hypothetical protein Hhal_0560 [Halorhodospira halophila SL1]
 gi|121588766|gb|ABM61346.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila
           SL1]
          Length = 389

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R +A+ +L  +  + G  + A++   + ++       
Sbjct: 84  GEVDRAIRIHQNLIARPSLTRRQRTYALLALGEDYMKAGVFDRAEKLFQEVVEQDAHVEQ 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   +EW RAI    + ++  + ++      L   ++     +G    +   
Sbjct: 144 ALRRLLTIYEHEREWDRAIETAERLEQVGEGDYRVRIGQLRCEQAAHALARGYTEHARKA 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PE----IANIYTHL 302
              +L    +   A++          + + A    E + + +P   PE    +A  Y  L
Sbjct: 204 LRRALSADPDCARANMLLGDLERELGRYKAAVKAYEAVGQQDPALLPEVLDGLAAAYRGL 263


>gi|298506099|gb|ADI84822.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
          Length = 896

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 91/286 (31%), Gaps = 32/286 (11%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
           H + +   D+    L  GL      +  L   M                       A+  
Sbjct: 443 HYMRQHRSDRALATLKEGLTGT-KGDASLYNTM----------------------AAIMF 479

Query: 134 RQYNIAHE-KLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +   A   K   M +           +L       GDL+ A    ++ +   P      
Sbjct: 480 NERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDGAIAEYSRMVQEDPHNLRAI 539

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +     L      A+ +  + +   +          +A +  +  KG++  +     +
Sbjct: 540 LGLASLSELKGREGDALAWYTKARDTGEYAG------YLALAGYHEKKGNLDKALAVLDD 593

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGK 310
           ++K    +  A +   + L++Q K + A  +   +  + P   +A  +   +  + +   
Sbjct: 594 AVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKA 653

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++ A R   +  ++     I++ +  E G + +A  +    ++  P
Sbjct: 654 IEEARRAVTLKPDAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEP 699



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 77/235 (32%), Gaps = 7/235 (2%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +   A  +Y  A ++   +L+   ++   V  L          + A   A K L  +P 
Sbjct: 66  AKAYQALGKYEQAEKEYLKVLKQNPSKTDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPG 125

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           +    E +   Y L    + A        +  KE  R  A L +A  L          + 
Sbjct: 126 SAEALEVLGLGYALKGMPAEAERNFLLALE--KEPRRTSAKLQLAVLLMEQKSSREKEAR 183

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----L 302
               E L     ++ A    A   +S   + +A  I  K+  + P  + A +Y      L
Sbjct: 184 ALIDEILTADPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPG-DPAPLYRQGVILL 242

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                    K A  L +   +  E   +   IA +  +   A      ++KIAP 
Sbjct: 243 EKGEMDKAEKTAETLVQKFPQKSEGARLKGLIAYQRKNYADAITALQTSVKIAPS 297



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 44/303 (14%)

Query: 69  PAMLFHMLHKRN----YDKGYKAL-----------YTGL---MSIAAHNIPLARKMHSYV 110
           P      + K        KG  A+             GL   ++        A+ +    
Sbjct: 599 PRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKAIEEAR 658

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                  +    + +   +   +     A ++++  L+       A   L     R G+ 
Sbjct: 659 RAVTLKPDAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEPGNVGAAMQLGEYLGRNGNT 718

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRA 226
            +A       L  +P+      A      +  +   A       L + +  A   N    
Sbjct: 719 AAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLEKAESFAPALNN--- 775

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L    +      G    +   A+ +LK    +   +     +L+   +  +A  ILEK+
Sbjct: 776 -LAFLYAEGY---GPREEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAVKILEKV 831

Query: 287 WKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEI--NKESVES---LVIVSKIAL 336
            K+ P +P     +A  Y      +T  + + A  L+E     +  ES    +++++++ 
Sbjct: 832 VKLMPSNPAVRYHLALAYR-----DTGDRARAATTLQEALNQGDFPESGQARIMLAELSG 886

Query: 337 EMG 339
             G
Sbjct: 887 AAG 889



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 12/235 (5%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            ++      G +  A+   T A+ ++P+       +   Y+      RA+  L    K  
Sbjct: 407 GIFN--LSKGRVREAESDFTTAVRVAPEMLNSRLVLAFHYMRQHRSDRALATL----KEG 460

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
               +  A L    +    ++     +      + K     + A    A    S      
Sbjct: 461 LTGTKGDASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDG 520

Query: 279 AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A     ++ + +PH     +       L       L    +    +       + ++   
Sbjct: 521 AIAEYSRMVQEDPHNLRAILGLASLSELKGREGDALAWYTK--ARDTGEYAGYLALAGYH 578

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDKILYWTQSALHAM 389
            + G++D+A A    A+K  PR     ++  +I  A     D I  +T     A 
Sbjct: 579 EKKGNLDKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAP 633


>gi|241668110|ref|ZP_04755688.1| hypothetical protein FphipA2_05034 [Francisella philomiragia
          subsp. philomiragia ATCC 25015]
 gi|254876645|ref|ZP_05249355.1| conserved hypothetical protein [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
 gi|254842666|gb|EET21080.1| conserved hypothetical protein [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
          Length = 385

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 32/76 (42%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+R+++   V+ L     I  +     + +   ++  + +    + +++  LF  +  F 
Sbjct: 1  MIRILKLIIVVVLATLIGIWATKNHGYIMLVMADKAIKVNLVAFVFVVFILLFVLVFGFR 60

Query: 61 VSRFFLSCPAMLFHML 76
          V +     P +LF+  
Sbjct: 61 VIKLSFQLPYLLFNWF 76


>gi|158425090|ref|YP_001526382.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
 gi|158331979|dbj|BAF89464.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
          Length = 779

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 98/298 (32%), Gaps = 23/298 (7%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
                     AL  G +   A +   A ++++   ++       +V  +         + 
Sbjct: 53  DGGRLKSAKDALRAGTLH-QAGDHKGAAQLYAASLKRD--PKNPIVQHMYALCLRQIGRI 109

Query: 137 NIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             A   L +   +        A Y       ++GD  +A+    KAL + P+ P     +
Sbjct: 110 PEAVAALRISTALDPRNVEALADYGSLL--LQMGDRAAAREAFEKALALRPNHPVAKAGI 167

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            +   +       +  + ++  N       +A L +  ++  +  G+   +    +E+++
Sbjct: 168 ARLSAVDGSLDDLLRTVAEQPGNG------QAALALGCAI-ISSGGEPDDAAKVWVEAVQ 220

Query: 255 LCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308
                    I     +     + R+A  +L+    + P     H  +  I          
Sbjct: 221 RGA-LTPEDIGIEGVNAYRGGRDREALALLKIAATLKPTVAALHANLGMILLEKRRH--A 277

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
             ++      +++   V +L+ +  + L+  +  +A A     +KI P   +  L A 
Sbjct: 278 EAMEALGEALKVDPNHVGALLNLGSVCLDRKAYPEALAYLNRVLKIEPDNVVARLGAA 335


>gi|171691775|ref|XP_001910812.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945836|emb|CAP72637.1| unnamed protein product [Podospora anserina S mat+]
          Length = 913

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 85/259 (32%), Gaps = 33/259 (12%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     + G++N A+R   +A   +PD   +  A V+         +A   L   ++NA 
Sbjct: 587 LMLAREKAGEINEARRVLARAFKQNPDNEDIWLAAVKLEADNGFIDQARDLLKTARQNAP 646

Query: 220 EWNRNRAILLIARSLENADKG-----------------------------DMIASYHDAI 250
                   +   R L N++                                   +     
Sbjct: 647 TDRVWMRSVAFERQLGNSEAALDLVIDALRLFPNAPKLWMMKGQIYEDMDQPAQAREAYG 706

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
             ++   +S+   +  ++     N   KA  +L++  +    P+ A ++T  +  E   G
Sbjct: 707 AGVRAVPSSVPLWLLYSRLEERLNNVVKARSVLDRARQAV--PKSAELWTELIRLERRAG 764

Query: 310 KLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
            + +A  L     +   +S ++ ++  L +    Q  +    AMK      + ++ A   
Sbjct: 765 NITQAKTLMATALQQMPKSGLLWAERILHLEQRTQRKSLLAEAMKKVENDPVLMVTAAYI 824

Query: 369 QANSHNTDKILYWTQSALH 387
                  ++   W + AL 
Sbjct: 825 LWKERKLEQADKWFERALK 843



 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 5/163 (3%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             + + +R  L +  +  +  +     +      +L++  NS    + A         K 
Sbjct: 507 GLDEDDDRKELWMEDAKASISREKYATARAIYAYALRVFPNSKSLYLAAVDLEREHGNKE 566

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSKI 334
                LEK  +  PH E    +  L  E      +    L      N ++ +  +   K+
Sbjct: 567 DLWNALEKAVEACPHQE--TFWLMLAREKAGEINEARRVLARAFKQNPDNEDIWLAAVKL 624

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
             + G IDQA      A + AP   +++     E+   ++   
Sbjct: 625 EADNGFIDQARDLLKTARQNAPTDRVWMRSVAFERQLGNSEAA 667


>gi|78222718|ref|YP_384465.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
 gi|78193973|gb|ABB31740.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
          Length = 729

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 13/239 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A  + +  +QI      A + L     + G++  A    TKA++++P        
Sbjct: 42  GDYAKAALEFKNAIQIDPKYAEAYHMLGLVEMKKGNIKGAFGNFTKAVELNPQHQEARLQ 101

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + + Y+ A     A+    +  K        + +L  A  +   +KG         +   
Sbjct: 102 LGRIYLGAGAPDEAMKEAVEVLKINPASEDAQ-LLKGAVLIARKEKGKARELLEGLVAKG 160

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENT 307
               +   A    A         + AE IL K   +NP     H  +A +      ++  
Sbjct: 161 VKKPD---AYSLLASIHALDGNAKDAEAILRKGLAINPSSSDLHLTLAGLCVGTGRTDEA 217

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           +  L+R + LE    +     + ++ +  + G + +A       + IAP KE   L A 
Sbjct: 218 ISLLQRVVSLEPGRTDH---RLKLAALCWDTGKVAEARKALTDLVAIAPEKEENRLQAA 273



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 15/262 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           N   A +     S         L  L              A  +   + +          
Sbjct: 458 NAEAALRKVLAKSPNDLEAKAELGDLFLA-----AGDLKRAEAEYGELKRKAPGLPVGYV 512

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +       G  + A     +A+ ++P +  +  ++ + Y    ++ +A   L+Q+ K  
Sbjct: 513 KMGDIYLHRGKSDKALAELEQAVRLNPSSELLAGSLARLYTRLGKFDKAEFLLDQRLKQN 572

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN---K 275
                N A         N  +     +     ++L L  ++  A+   A  L        
Sbjct: 573 P----NDAASYTLLGQMNVARNQYGKARQAYEKALSLNGSNWSAANDLAFLLAETGSGAD 628

Query: 276 KRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             +A  ++EK+ +  P  P + +   + +    N    ++   ++     +S      + 
Sbjct: 629 LDRALTLIEKVKQSRPDDPRVLDTVGWIYYKKGNAGKAVEILSQVHRKTGDSPVIDYHLG 688

Query: 333 KIALEMGSIDQAHAKAMLAMKI 354
             + + G   +A      AM  
Sbjct: 689 MASYKAGDKARAKELLTKAMTS 710



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 100/314 (31%), Gaps = 42/314 (13%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
            AL    +++  + +  A K+ + V ++   + +     L+  I + + +   A  +   
Sbjct: 342 NALAQ--IALDRNRVDEAVKLVTEVLKESPKNTDA--RFLKGNIHMMKGEGAQAVAEYRT 397

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           ++            L        + N A      AL I P+      A+ + +V+ K+  
Sbjct: 398 VVTDNPQSVPGFIRLAEAHLLNREKNLAFDNLQNALKIDPENRDALVALARYHVMQKDMK 457

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A   L +    +      +A L           GD+  +  +  E  +      +  + 
Sbjct: 458 NAEAALRKVLAKSPNDLEAKAEL----GDLFLAAGDLKRAEAEYGELKRKAPGLPVGYVK 513

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
                + + K  KA   LE+  ++NP  E+                              
Sbjct: 514 MGDIYLHRGKSDKALAELEQAVRLNPSSELLAG--------------------------- 546

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQS 384
                ++++   +G  D+A       +K  P     + LL Q+  A +    K     + 
Sbjct: 547 ----SLARLYTRLGKFDKAEFLLDQRLKQNPNDAASYTLLGQMNVARNQ-YGKARQAYEK 601

Query: 385 ALHAMPDPLWISDD 398
           AL  +    W + +
Sbjct: 602 ALS-LNGSNWSAAN 614



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEIN 321
            K L  +    KA +  +   +++  P+ A  Y       +   N  G      +  E+N
Sbjct: 35  GKELYDKGDYAKAALEFKNAIQID--PKYAEAYHMLGLVEMKKGNIKGAFGNFTKAVELN 92

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
            +  E+ + + +I L  G+ D+A  +A+  +KI P  E   LL            K    
Sbjct: 93  PQHQEARLQLGRIYLGAGAPDEAMKEAVEVLKINPASEDAQLLKGAVLIARKEKGKAREL 152

Query: 382 T 382
            
Sbjct: 153 L 153



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 69/218 (31%), Gaps = 9/218 (4%)

Query: 177 ATKAL----DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIA 231
           A KAL     I+P+                E   A   L +      K +    A+  + 
Sbjct: 251 ARKALTDLVAIAPEKEENRLQAAGFLAGKGEADEAEKLLKEGIAGKGKNYKLRFALADLY 310

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +    D+   + +    ++     ++    +   A+  + +N+  +A  ++ ++ K +P
Sbjct: 311 LNTGKGDQAVTLLTETAGLDKASRQESLQAKNAL-AQIALDRNRVDEAVKLVTEVLKESP 369

Query: 292 HPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               A       H++       +     +   N +SV   + +++  L     + A    
Sbjct: 370 KNTDARFLKGNIHMMKGEGAQAVAEYRTVVTDNPQSVPGFIRLAEAHLLNREKNLAFDNL 429

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
             A+KI P     L+          +        +  L
Sbjct: 430 QNALKIDPENRDALVALARYHVMQKDMKNAEAALRKVL 467


>gi|288818735|ref|YP_003433083.1| hypothetical protein HTH_1431 [Hydrogenobacter thermophilus TK-6]
 gi|288788135|dbj|BAI69882.1| hypothetical protein HTH_1431 [Hydrogenobacter thermophilus TK-6]
 gi|308752322|gb|ADO45805.1| hypothetical protein Hydth_1420 [Hydrogenobacter thermophilus TK-6]
          Length = 380

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 59/411 (14%), Positives = 127/411 (30%), Gaps = 50/411 (12%)

Query: 5   IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRF 64
           + +  + +++   F  V+ +   V + +    Y    FV    L    FA   L     F
Sbjct: 6   VLFIVIFTVLFLIF--VAQHAYYVKLNFLGITYEVPLFV----LVLVSFAVGFLLPALYF 59

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
            +     +      ++  +G   L  G    A   +    +            NE +  +
Sbjct: 60  LVKD---IRQTAFTKSITRGISYLARGYPQKAEGELSKVSRR-----------NEEIALI 105

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L   IA     Y      ++            +  L     R  D   A+ Y   AL   
Sbjct: 106 LLKAIAERGEIYRGEEVDIKRDAGFVD-AFLGLKLL-----RYRDYEKAKGYLLSALSKD 159

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                  +++     L K+    I       K  ++W +     +++  L  A +     
Sbjct: 160 SSNLLALKSLRNISFLEKDLEACIKHQESVLKLCEKWEKETQKRILSDILSYASESLPQQ 219

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                 ++L L  +    +    K ++ +   ++A+  +EK + +  H ++  I +    
Sbjct: 220 RKDLLEKALDLHRSFYSQA-MWIKYMLEKEDVKEAKKQIEKAFTMGVHNQVLAILSQNEE 278

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             T     +K    L  IN +      ++++I +++    Q         +         
Sbjct: 279 HLTRIMDIIKEKEEL--INPD------VLARIYIKLHLFTQLRPLMEKLSQP------IK 324

Query: 363 LLA-QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412
           L+A   E  +    D+        L+      W+   G   + +LP+    
Sbjct: 325 LMATAFE--SHREMDRSCGEMLQELYKP----WVCSCGESYNNYLPMCEKC 369


>gi|198282345|ref|YP_002218666.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|198246866|gb|ACH82459.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 505

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 20/247 (8%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDL-NSAQRY 176
           E L+ L    I   + + + A       +   P   E  +      +    D  + A+  
Sbjct: 256 EALMNL--GAILSDQGRVDEAIGTFRKALTIKPDYLEALMR--LGVALGRQDRMDEAETV 311

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSL 234
             KAL I PD P     +         W    T L Q      ++      L   ++R  
Sbjct: 312 LRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIKPDYPEALMNLGAALSRQG 371

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
              D+ + I     AI+      +   A +    +L  Q +  +AE IL +   +   PE
Sbjct: 372 RCLDEAENILRRTLAIQ-----PDHPDALVNLGATLNKQGRWNEAETILRQAVAIK--PE 424

Query: 295 IANIYTHLLSE-NTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAM 349
            A+   +L +  +  G+L  A  +         +  ++LV +  I  + G  ++A     
Sbjct: 425 HADALINLGAVLSKQGRLDEAETILRQALTIMPDQADALVNLGVILRQRGCPEEAKTAFQ 484

Query: 350 LAMKIAP 356
            A+   P
Sbjct: 485 QALTANP 491



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 16/225 (7%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             KAL I P  P     +            AI    +      ++    A++ +  +L  
Sbjct: 244 FRKALSIKPAYPEALMNLGAILSDQGRVDEAIGTFRKALTIKPDY--LEALMRLGVALGR 301

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE- 294
            D+ D   +     ++L +  +   A +    +L  + +  + E +L +   + P +PE 
Sbjct: 302 QDRMD--EAETVLRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIKPDYPEA 359

Query: 295 ---IANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
              +    +      +     L+R   L  I  +  ++LV +     + G  ++A     
Sbjct: 360 LMNLGAALSRQGRCLDEAENILRR--TLA-IQPDHPDALVNLGATLNKQGRWNEAETILR 416

Query: 350 LAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            A+ I P     L+ L  +        +      + AL  MPD  
Sbjct: 417 QAVAIKPEHADALINLGAVLSKQGRLDE-AETILRQALTIMPDQA 460



 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 5/125 (4%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A+    + L I PD P     +         W+ A T L Q      E     A  LI
Sbjct: 375 DEAENILRRTLAIQPDHPDALVNLGATLNKQGRWNEAETILRQAVAIKPE----HADALI 430

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 + +G +  +     ++L +  +   A +     L  +    +A+   ++    N
Sbjct: 431 NLGAVLSKQGRLDEAETILRQALTIMPDQADALVNLGVILRQRGCPEEAKTAFQQALTAN 490

Query: 291 P-HPE 294
           P HPE
Sbjct: 491 PNHPE 495


>gi|114645545|ref|XP_520818.2| PREDICTED: transmembrane and TPR repeat-containing protein 1
           isoform 2 [Pan troglodytes]
          Length = 882

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781

Query: 389 MPDP 392
             DP
Sbjct: 782 PKDP 785



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 738

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870


>gi|32477513|ref|NP_870507.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1]
 gi|32448067|emb|CAD77584.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1]
          Length = 680

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A   L   L+I      +V +L      +GDL  A    T+A +++P        
Sbjct: 456 GDYLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNG 515

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +     +  ++  +   L Q  +    +  +   L   RS +    G    +     +++
Sbjct: 516 LGATQGMMGDFEASEATLKQAIEIDPNYANSYGNLATLRSAQ----GRNEEAIELFQKAV 571

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGK 310
           +L    +       + L+S  +   A  + + +   +P    A +         + T   
Sbjct: 572 QLAPERMDHRTNLGRVLMSAQRWEDASKVWQSVLDESPEDVSALLNLGVIAANQQRTEDA 631

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +    R+ EI    + +   +  +   +G+  +A      A ++ P++
Sbjct: 632 IGYFERVLEIVPNHLSATYNLGAMHDALGNTSEAEQYFRRAERLQPQQ 679


>gi|253989561|ref|YP_003040917.1| tetratricopeptide repeat-containing protein [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781011|emb|CAQ84173.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 389

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 96/290 (33%), Gaps = 57/290 (19%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   TF       LL VQ     R Y  A                
Sbjct: 83  GEVERAIRIHQSLIESASLTFDQ----RLLAVQ--QLGRDYMSA---------------- 120

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               LY  +    +   AQ    K    +       ++++  Y    +W +AI    +  
Sbjct: 121 ---GLYDRA----ENMFAQLVNEKEFRQN-----AFQSLLVIYQSTSDWKKAIDVAEKLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLI 271
           K+ K   R + A      +L+     D+  +    + A+++ K C      SI   +  +
Sbjct: 169 KSGKHELRQKIAHFYCELALQEMSGDDLDEAIGYLNKAVQADKNCAR---VSIMLGRLFM 225

Query: 272 SQNKKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           ++ +  KA   L+ + +          P +   Y HL   +         R  E N  + 
Sbjct: 226 ARQEYIKAADALKSVLEQDKELVSESLPMLQECYQHLNQGDEWENF--LRRCVEENGGAT 283

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQA 370
            + ++++ I  +    + A       +K  P   +   L+    A+ E+ 
Sbjct: 284 -AELMLADIIEQKEGHEVAQIYINHQLKRHPTMRLFCRLMDYHLAEAEEG 332


>gi|40063717|gb|AAR38498.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 733

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 69/199 (34%), Gaps = 13/199 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +G+L+ A +   KAL I PD   V   + +           A+    Q      ++  
Sbjct: 54  KAVGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQ-ELGRLDAAVKSYEQALDIQPDY-- 110

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A       +   + G + A+     ++L +  +   A      +L   N+   A    
Sbjct: 111 --AEAHNNLGITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSY 168

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           EK   +NP     H  + N+   L   +    +K   +   IN +  E+   +  +  ++
Sbjct: 169 EKTLAINPDYAEAHNNLGNVLKDLGQLDAA--VKCYEKTLAINPDYAEAHNNLGNVLQDI 226

Query: 339 GSIDQAHAKAMLAMKIAPR 357
             +D A      A+ I P 
Sbjct: 227 DQLDAAVKCYEKALAINPD 245



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 76/238 (31%), Gaps = 18/238 (7%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           A   +  A K           + E    L L +Q      + + A +  E  L I     
Sbjct: 55  AVGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQEL---GRLDAAVKSYEQALDIQPDYA 111

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A  +L      +G L++A +   KAL I+PD       +        +   A+    + 
Sbjct: 112 EAHNNLGITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSYEKT 171

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                ++    A           D G + A+     ++L +  +   A       L   +
Sbjct: 172 LAINPDY----AEAHNNLGNVLKDLGQLDAAVKCYEKTLAINPDYAEAHNNLGNVLQDID 227

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEINKESVESLVIV 331
           +   A    EK   +N  P+ A  Y++    N +  L R    L        ES + +
Sbjct: 228 QLDAAVKCYEKALAIN--PDFAEAYSN--RGNVLKDLNRLDEALVS-----YESAIAI 276


>gi|33864078|ref|NP_895638.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33635662|emb|CAE21986.1| TPR repeat:HAT (Half-A-TPR) repeat [Prochlorococcus marinus str.
           MIT 9313]
          Length = 829

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 74/259 (28%), Gaps = 26/259 (10%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSL 160
             +  Y            ++L        E +   A         +        F +  +
Sbjct: 194 AALEQYRFALLLAPESPELHLNFASALKKEGKVEEAIASCRNAIELRPDFEAAYFGL-GI 252

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                  G+   A+    KA+D+ PD       +        E+  A            +
Sbjct: 253 VL--KENGEFEEAKASYRKAIDLKPDFADAYLNLGNILKENGEFEEAKASYRTAIDLKPD 310

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +    A L +   L+  ++GD+  +     ++++L  +   A +     L  +    +A 
Sbjct: 311 F--ADAYLNLGNILK--EEGDVEEAIASYRKAIELKPDFADAYLNLGNILKDKGDVGQAI 366

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
               K   +   P+ +  Y  L              L   +    +S +I  K  L++  
Sbjct: 367 ASYRKAIDLK--PDFSEAYYQL-------------FLVNSHSGDHDSALIALKQCLDVDD 411

Query: 341 -IDQAHAKAMLAMKIAPRK 358
               A      A   A R+
Sbjct: 412 NHYNARQSIGHAFFQADRR 430


>gi|312111146|ref|YP_003989462.1| hypothetical protein GY4MC1_2109 [Geobacillus sp. Y4.1MC1]
 gi|311216247|gb|ADP74851.1| Tetratricopeptide repeat protein [Geobacillus sp. Y4.1MC1]
          Length = 1396

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 97/262 (37%), Gaps = 22/262 (8%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            G+ S A      A K               L  L   ++  A  +++ A    E  L+I 
Sbjct: 888  GMFSKAIGVYEQASKAQKSTF--------PLYRL--AEMYRAFERWDEAKRYYEACLEID 937

Query: 151  ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 A   L   +    +++  + +  KAL+  P    V  A      L  + S  +  
Sbjct: 938  DAFAVAHLRLAVLNEMEENIDKQRFHLQKALEHDPLHIHVAYAA----ALFDDPSLLLQT 993

Query: 211  LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +   ++ A +     ++  I  ++     GD+        ++L+L  +       AAK L
Sbjct: 994  MEAARERAGDVWYYDSLGYIYGAM-----GDISKEKEAVEQALRLHPDHPDVLHHAAKVL 1048

Query: 271  ISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            + + K R+A  ILE++ + +  + ++   Y    S    G  K   RL +   ++ +  +
Sbjct: 1049 VKEGKSREAAAILERLIEQDVRNEDLYETYVQAFSYTMRGIGKLRERLRKWKLDNQKKSI 1108

Query: 330  IV--SKIALEMGSIDQAHAKAM 349
            +   +  AL    +D A  +A 
Sbjct: 1109 VYMHAASALSSSMLDIARGEAD 1130


>gi|126339121|ref|XP_001372916.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 1000

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 84/263 (31%), Gaps = 41/263 (15%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             D   A+ Y  +AL ++P        +        +   AI FL    K   E+    +
Sbjct: 641 TKDTTEAKEYYQRALQLNPQHNRALFNLGNLLKSQGKKEEAIIFLRDSIKFGPEFADAYS 700

Query: 227 ILLIARSLE------------------------------NADKGDMIASYHDAIESLKLC 256
            L    + +                                D G   ++ +   ++++L 
Sbjct: 701 SLASLLAEQELFEEAEEVYQSGIKNCPESPDLHNNYGVFLVDAGAPESAMYHYQQAIRLS 760

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKL 311
            +  +A +   +   S  + ++AE   ++   +    EI     A  Y     E  +   
Sbjct: 761 PSHHVAMVNLGRLYRSLGENKEAEKWYKRALDITQTAEILSPLGALYYNTGRYEEALQIY 820

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML-AMKIAPRKEIFLLLAQIEQA 370
           + A  L      + E  + ++++   MG  ++A         + A   E + LL+ I   
Sbjct: 821 REAATL---QPSAKEIQLALAQVLAMMGQTEEAETMTNHIVSEEAGCLECYRLLSAIYSK 877

Query: 371 NSHNTDKILYWTQSALH-AMPDP 392
             H   K L   + AL     DP
Sbjct: 878 QEH-YSKALEAIEKALQLKPKDP 899


>gi|254482621|ref|ZP_05095859.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036980|gb|EEB77649.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 749

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 109/338 (32%), Gaps = 56/338 (16%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            D G   L     ++   +   AR + S  +  +  +   +     ++          A 
Sbjct: 426 RDTGNH-LARSFAAVDQGD---ARAVPSLAALANDTNAPPIWRATAMEALGQAGGRE-AT 480

Query: 141 EKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           + +  +L       R   V SL F                +   ++P      + V+   
Sbjct: 481 QTMAALLYDDDSIIRASTVRSLQF-----------LSLPQRFQLLTPLL---NDPVLAVR 526

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAIL----------------LIARSLENADKGDM 242
           +   +   A+  +   +  A+E NR R +                 L   +L  +++GD 
Sbjct: 527 MEVAQ---ALAGVPLDQIKAQEANRLRTLFKEYVTVYEQHSDMPGVLSQLALFYSNRGDA 583

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEIA 296
            ++     E++++    + A +  A  L +QN++ +A   L +   V P      H   A
Sbjct: 584 PSAERAYKEAIEINPQLVAAYLNLADLLRAQNREEEARKFLLEALAVAPDNGNTIH---A 640

Query: 297 NIYTHLLSEN---TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                  S +    +  L +A  LE +         + +    ++G+  QA  +     +
Sbjct: 641 LGLLETRSGDSEKALDYLAQAAALETLGTRH---RFVYAIALHDLGNPRQAVTELNKLNR 697

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMP 390
             P  E  LL      A   +  K   + Q  +  A  
Sbjct: 698 KFPSDEQILLALANYSAELGDYAKARAYAQQLVQLAPR 735


>gi|300718965|ref|YP_003743768.1| cellulose synthase operon C domain protein [Erwinia billingiae
           Eb661]
 gi|299064801|emb|CAX61921.1| Cellulose synthase operon C domain protein [Erwinia billingiae
           Eb661]
          Length = 1102

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 90/280 (32%), Gaps = 41/280 (14%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           LA      A  + +    +     +A+  L   +    +  +A+   ++AL +       
Sbjct: 365 LAAGNLPQAASQYQRARSLDNRDSYALIGLGDVALAQKNPATAEVQYSRALRLDAGNTTA 424

Query: 191 TEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              +   Y       +A+ F+N     QKK         R+  L A +   A  G++  +
Sbjct: 425 ARRLAALYQQQSP-QKAMAFINGLPASQKKALGDTLASLRSSALSAEADRLAAGGNVRQA 483

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL- 303
                ++L+L  + +  +   A +L    + + A+  ++ + +  P  P  A +Y + L 
Sbjct: 484 ADVYRQALQLSPDDVWLNTRLAGALRQSGQTQAADRQMQAMARQQPGVP--AQVYANALY 541

Query: 304 ---SENTVGKLKRALRLEEINKES--------VESLVIVSKIA---------LEMGSIDQ 343
              S+     L +   L +   +         +E+ +++++           +    +  
Sbjct: 542 LSGSDRPQAALAQIHTLPQAKWDHNITDLNTRLETGLLIARAEASLDNIEALIARHQLAA 601

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
           A  +       A    ++                   W  
Sbjct: 602 ARKQLNALPPEASTANVY-----------SGRRVANAWLA 630


>gi|270004555|gb|EFA01003.1| hypothetical protein TcasGA2_TC003916 [Tribolium castaneum]
          Length = 1054

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 126 EALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYITALQYNPDLYCVRSDLG 183

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       G++  A  +  K
Sbjct: 184 NLLKA-----LGRLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 235

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 236 AVGLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 291

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      +++L  N   A    A +L  + +  +AE       ++ P H +  N 
Sbjct: 292 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLCPSHADSLNN 351

Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++  E        +L     LE    E   +   ++ +  + G +++A      A++I
Sbjct: 352 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 409

Query: 355 APR 357
            P 
Sbjct: 410 QPT 412



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 326 GQVAEAEECYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 382

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ S A+    +  +
Sbjct: 383 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQ 442

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 443 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 492



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 261 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 320

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 + + A    N   +       + A  L   +    ++G +  +    +++L++ 
Sbjct: 321 ALKEKGQVAEAEECYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 376

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDVSGAL 434

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 435 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 480


>gi|239994660|ref|ZP_04715184.1| TPR repeat protein [Alteromonas macleodii ATCC 27126]
          Length = 668

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 27/274 (9%)

Query: 107 HSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYS 159
            +          E       L+  Q+ +A +Q   A        + +++ P +       
Sbjct: 330 TAAKDFNAYLQQEPDDLQAVLMLSQVYMATQQDKQALALLERHQDALMEDPDSALL---- 385

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R      A+R         P+   +    ++      +   A++ L       K
Sbjct: 386 LGDLFIRQNKAFKAERLLQNLEYKYPNENKLQLFKIKLMAARGKQDEALSILENNLSTYK 445

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +     A  L   SL N        +   A     L  N        A  LI Q +  +A
Sbjct: 446 D----NAGFLFTYSLMNLQAQQFKNALKGADLLSALFPNEAEVFNLKAGILIRQGRLEEA 501

Query: 280 EVILEKIWKVNPH--PE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           ++ +EK    NP   P    +A   + L + +    L     L  ++ +  E+L++ +  
Sbjct: 502 KINIEKALAQNPTLFPAKFNLAATESRLGNVDKSNLL--VEELLALSPQHNETLMLKAFN 559

Query: 335 ALEMGSIDQAHAKAMLAMKIAP-----RKEIFLL 363
             + G++++A    +  + + P     R+ +  L
Sbjct: 560 LSKAGNLEEAKQIYLDILTLTPSNTGARERVSSL 593



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 106/285 (37%), Gaps = 35/285 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL SIA  N  L++                + + L+ Q+A  +   + A   L+  L   
Sbjct: 173 GLASIALQNEDLSKATSLINKAMSLEPKNAITWRLKGQLAYRQGDTDAATAHLQKALTFN 232

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+ +L        D ++A+ +  + +  +P+ P     ++  ++ +++  +AI  
Sbjct: 233 RDDPIALRNLVDLYLEAKDYDTAKLFVDEIIQDTPNDPLA--ILLNSWLQSRDNQQAID- 289

Query: 211 LNQKKKNAKEWNRN--------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            N+K K   ++           + +LL    L N    +M  +  D    L+   + + A
Sbjct: 290 -NEKLKELNDFMAQLDPELITSQPMLLYISGLTNFFNNNMETAAKDFNAYLQQEPDDLQA 348

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-------PE----IANIYTHLLSENTVGKL 311
            +  ++  ++  + ++A  +LE+      H       P+    + +++          +L
Sbjct: 349 VLMLSQVYMATQQDKQALALLER------HQDALMEDPDSALLLGDLFIRQNKAFKAERL 402

Query: 312 KRALRLEEINKESVESLVIVSKIALEM--GSIDQAHAKAMLAMKI 354
                LE       E+ + + KI L    G  D+A +     +  
Sbjct: 403 --LQNLEYKYPN--ENKLQLFKIKLMAARGKQDEALSILENNLST 443



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 9/142 (6%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+ R+       D   +  D    +    N + A    A   +      KA  ++ K   
Sbjct: 137 LMIRATACIRLQDESCALRDYNTIVSRTPNFVPAINGLASIALQNEDLSKATSLINKAMS 196

Query: 289 VNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           + P   I         Y    ++     L++AL     N++   +L  +  + LE    D
Sbjct: 197 LEPKNAITWRLKGQLAYRQGDTDAATAHLQKALT---FNRDDPIALRNLVDLYLEAKDYD 253

Query: 343 QAHAKAMLAMKIAPRKEIFLLL 364
            A       ++  P   + +LL
Sbjct: 254 TAKLFVDEIIQDTPNDPLAILL 275


>gi|325111180|ref|YP_004272248.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324971448|gb|ADY62226.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 368

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 91/244 (37%), Gaps = 15/244 (6%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL-NSAQRYATKALDI 183
           L  +IA A+ +   A    +   + P      V++    + +  +    A R  ++A+ +
Sbjct: 109 LRGRIADAQGKLQQAINFYQQGTKQPDV-AAGVWNSLGLALQRDEQLQPALRAFSEAIRL 167

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           SPD+P   E       L  +   +++  N+          +RA     R +     G+  
Sbjct: 168 SPDSPMGYENRAGLLALMGDHKASLSDSNRALAIDP----HRAGAYSNRGVTWEALGEPK 223

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHL 302
            +  D   +L+       A    A   +++   R A    E++ K  P  P++AN Y  L
Sbjct: 224 KALADFTRALEEDPAHFDARANRALLNVAEKNWRAAATDYEQLRKYAPSSPDLANDYAWL 283

Query: 303 L---SENTVGKLKRALRLEEIN---KESVESLV--IVSKIALEMGSIDQAHAKAMLAMKI 354
           L      TV   ++A+ L E+     +   S     ++    E G  ++A       +K 
Sbjct: 284 LATCPHETVRNGRKAVELAELAVRLTDHRVSDYEDTLAAAFAEAGDFEKAIEIQQRLVKS 343

Query: 355 APRK 358
            P +
Sbjct: 344 KPDE 347


>gi|32474853|ref|NP_867847.1| hypothetical protein RB7495 [Rhodopirellula baltica SH 1]
 gi|32445393|emb|CAD75394.1| conserved hypothetical protein-containing TPR-domains
           [Rhodopirellula baltica SH 1]
          Length = 3273

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 32/265 (12%)

Query: 145 MMLQIPATREFAVYSLY--FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            + ++ +T E    +L    ++  +    + +    KAL  S        A ++   +A+
Sbjct: 500 RLAEVFSTFELGERALAAWRDASEMDLTFAQELRFAKALRDSKQHEEAF-ARLE---VAR 555

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAIL----------------LIARSLENADKGDMIASY 246
           + +       Q  K+  E  R    L                L   +L +   G +  + 
Sbjct: 556 DIAETPDEQEQVLKDQIETYRQAGTLGEQIATLKTQPPTVDRLRQLALMHQAAGQLPDAA 615

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYT 300
               ++ K   +++   + AA     Q +   A  + EK+      ++ N    +A + T
Sbjct: 616 EAIRQARKSEPDNVDVLVVAADIAERQTRLSDAVTLFEKLSQVDTRFRTNYLQRVAGLQT 675

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            L   +    L     L + N  S ES +  ++ AL     D+A      AM +APR   
Sbjct: 676 RLGQIDEA--LATCESLIDANPASPESYLFYARTALSANRDDEAFTALRRAMNVAPRDNG 733

Query: 361 FLLLAQIEQANSH--NTDKILYWTQ 383
              +   E A S+  +    LYW  
Sbjct: 734 PRRMMASELAESYRTDEAIELYWQA 758



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 88/272 (32%), Gaps = 43/272 (15%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            LM  AA  +P A +      +  +  +   V ++   IA  + + + A    E + Q+ 
Sbjct: 602 ALMHQAAGQLPDAAEAIRQARK--SEPDNVDVLVVAADIAERQTRLSDAVTLFEKLSQVD 659

Query: 151 ATREFAVYSLYFESC-----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            TR     + Y +       R+G ++ A       +D +P +P       +  + A    
Sbjct: 660 -TRF---RTNYLQRVAGLQTRLGQIDEALATCESLIDANPASPESYLFYARTALSANRDD 715

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A T L +    A   N  R +     + E A+      +     +++            
Sbjct: 716 EAFTALRRAMNVAPRDNGPRRM----MASELAESYRTDEAIELYWQAI------------ 759

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
                 SQ   R    I++         ++A +Y      +    + R   L   + ++ 
Sbjct: 760 ---QYESQTDDR--ISIIK---------QLAPLYD--RQGDIEELISRIESLGREDGDAR 803

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           E+L + S     +     A       +   PR
Sbjct: 804 ETLRLTSAAYEAIEDYGAARQSIDQLIAQQPR 835


>gi|187927360|ref|YP_001897847.1| tetratricopeptide repeat-containing protein [Ralstonia pickettii
           12J]
 gi|309779939|ref|ZP_07674693.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA]
 gi|187724250|gb|ACD25415.1| Tetratricopeptide TPR_2 repeat protein [Ralstonia pickettii 12J]
 gi|308921298|gb|EFP66941.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA]
          Length = 645

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 22/208 (10%)

Query: 191 TEAVVQQY---VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +A++Q       + + + A+  L +    + +  R    L +AR+       D   +  
Sbjct: 196 ADALLQLQQQMSKSSDPAGAVGALQR--IASHDMQRPETHLALARAK--VAAKDTAGALT 251

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302
           +   +LKL      A+I AA+ L + +    A   L    K  P     H  +A +Y  +
Sbjct: 252 ELDTALKLRPGYEDAAILAAE-LRADSDPDAAITGLRSFLKAAPASIDGHLALARMYL-V 309

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKE 359
            ++    + +    L++I        + +  + L+    D A         A   +P   
Sbjct: 310 RNQQDKARAE-FETLKKIAPNDARITLALGLLNLQQRQYDDAERYLKEYVTATAKSPTLS 368

Query: 360 ---IFLLLAQIEQANSHNTDKILYWTQS 384
               +  LAQ+ +    +    L W   
Sbjct: 369 PEPGYQGLAQLAE-EKRDYAGALGWVDK 395



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 7/203 (3%)

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           ++SP +    +      V   +WS     L  +        R  A+L + + +  +    
Sbjct: 154 ELSPTSMPARQVQQLLLVATGQWSEVEPMLQAQLNKVSPGQRADALLQLQQQMSKSSDPA 213

Query: 242 MIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
                   I S  +       +  A A++ ++      A   L+   K+ P + + A + 
Sbjct: 214 GAVGALQRIASHDMQ---RPETHLALARAKVAAKDTAGALTELDTALKLRPGYEDAAILA 270

Query: 300 THLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357
             L +++     +       +    S++  + ++++ L     D+A A+     KIAP  
Sbjct: 271 AELRADSDPDAAITGLRSFLKAAPASIDGHLALARMYLVRNQQDKARAEFETLKKIAPND 330

Query: 358 KEIFLLLAQIEQANSHNTDKILY 380
             I L L  +        D   Y
Sbjct: 331 ARITLALGLLNLQQRQYDDAERY 353


>gi|327542179|gb|EGF28672.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica
           WH47]
          Length = 680

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A   L   L+I      +V +L      +GDL  A    T+A +++P        
Sbjct: 456 GDYLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNG 515

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +     +  ++  +   L Q  +    +  +   L   RS +    G    +     +++
Sbjct: 516 LGATQGMMGDFEASEATLKQAIEIDPNYANSYGNLATLRSAQ----GRNKEAIELFQKAV 571

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGK 310
           +L    +       + L+S  +   A  + + +   +P    A +         + T   
Sbjct: 572 QLAPERMDHRTNLGRVLMSAERWEDAIKVWQSVLDDSPEDVSALLNLGVIAANQQRTEDA 631

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +    R+ EI    + +   +  +   +G+  +A      A ++ P++
Sbjct: 632 IGYFERVLEIVPNHLSATYNLGAMHDALGNTSEAEQYFRRAERLQPQQ 679



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 5/169 (2%)

Query: 124 LLEVQIALAERQ-YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           LL   +A ++   Y+         L+       A  +L     R GD   A+ +  ++L+
Sbjct: 411 LLLATVAFSQATIYSGLEVLWRDTLEKNPNSFMAHNNLGALLNRRGDYLEAETHLRRSLE 470

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           I P+       + Q      +   A++   +      E N   A             GD 
Sbjct: 471 IKPNFADSVINLAQARQNLGDLEEALSLYTRA----TELNPGLAEAYNGLGATQGMMGDF 526

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            AS     +++++  N   +    A    +Q + ++A  + +K  ++ P
Sbjct: 527 EASEATLKQAIEIDPNYANSYGNLATLRSAQGRNKEAIELFQKAVQLAP 575


>gi|115352517|ref|YP_774356.1| HemY domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115282505|gb|ABI88022.1| HemY domain protein [Burkholderia ambifaria AMMD]
          Length = 395

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/409 (11%), Positives = 115/409 (28%), Gaps = 45/409 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  ++  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAILFGIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIGIVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAARDALAVDAN---- 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                  Q A +      AH   E   +            +       +   A+  A   
Sbjct: 119 -------QGAASLVAATAAHRMHEYTRRDD----------WLSKVDAPEWQDARLLAAAD 161

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +           A +       +   A     + ++  K W     +       E     
Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221

Query: 241 DMIASYHDAIESL----KLCDN--------SIM-------ASICAAKSLISQNKKRKAEV 281
             +     A E+L    +   +                   +  AA+ L+   ++ +A  
Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPLERQSPRLADLAAELLVPLERRPEARR 281

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           I+E+    N    +   Y      + +  +++A   ++ + +  + L  + ++  +    
Sbjct: 282 IVEEALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLW 341

Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +A +    A+K A  +         LA++ +          ++ +SAL
Sbjct: 342 GKAQSFLEAALKQADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|197285173|ref|YP_002151045.1| tetratricopeptide repeat protein [Proteus mirabilis HI4320]
 gi|227355604|ref|ZP_03839998.1| lipopolysaccharide N-acetylglucosaminyltransferase [Proteus
           mirabilis ATCC 29906]
 gi|194682660|emb|CAR42785.1| conserved hypothetical protein [Proteus mirabilis HI4320]
 gi|227164211|gb|EEI49104.1| lipopolysaccharide N-acetylglucosaminyltransferase [Proteus
           mirabilis ATCC 29906]
          Length = 389

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 104/314 (33%), Gaps = 47/314 (14%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            +   A    + +++        R  A+  L  +    G  + A+         +    S
Sbjct: 83  GEVERAIRIHQSLMESAALSFEQRLLAIQQLGRDYVAAGVYDRAEHMFLQLIDEQDFRQS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMI 243
                  ++++  Y L  +W +AI    +  K  + E     A      +L+     ++ 
Sbjct: 143 -----ALQSLLAIYQLTSDWGKAIETAEKLVKLGQHELKEQIAHFYCELALQEMSSDNLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297
            +     ++ ++       SI   +  I++++K KA      ++E  K       P +  
Sbjct: 198 NALSFLQKAGQMDPLCARVSIMYGRIYIARDEKNKAIDVLMKVIEQDKEMVSETLPMLFE 257

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIAL-----EMGSIDQAHAKAMLA 351
            +    S+    + +  LR      + VES    ++++ L     E   I+ A       
Sbjct: 258 CF---QSQGDPARWEAYLR------QCVESNCGAIAELYLADIIEEKEGIEAAQLYINRQ 308

Query: 352 MKIAPRKEI-FLLL----AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV-- 404
           ++  P   + + L+    A+ E+  +  +  +L +          P +       +S   
Sbjct: 309 LERHPTMRLFYRLMRYHLAEAEEGRAKESLILLRYMV-GEQIRTKPDYRCHKCGFTSHAL 367

Query: 405 -WLPLSPISKTLCY 417
            W    P  ++   
Sbjct: 368 YWH--CPSCRSWDT 379


>gi|212711756|ref|ZP_03319884.1| hypothetical protein PROVALCAL_02831 [Providencia alcalifaciens DSM
           30120]
 gi|212685278|gb|EEB44806.1| hypothetical protein PROVALCAL_02831 [Providencia alcalifaciens DSM
           30120]
          Length = 390

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 98/307 (31%), Gaps = 31/307 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +++        R  A   L  +    G  + A+    +  D       
Sbjct: 84  GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMTAGVYDRAENMFQQLTDEVDFKQS 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             ++++  Y L  +W +AI    +  K   E  R + A      + +     D+  +   
Sbjct: 144 ALQSLLSIYQLTSDWGKAIETATKLVKLGSEELREQIAHFYCELATQELASDDIDEALSL 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH----------PEIANI 298
             +  +   N    SI   +  I Q    KA   L +++    H          P +   
Sbjct: 204 LNKGEQADKNCARVSIMKGRIFIEQGNYEKAIAALVQVY----HQDRELVSETLPLLYEC 259

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y H    +         +  + N  ++ + + ++ I +E  + + A +     ++  P  
Sbjct: 260 YRHTGLADGWE--AYLRQCVDGNTGAI-AELYLADIIVEKQNHEAAASYINDQIQRHPTM 316

Query: 359 EI-FLLL-AQIEQANSHNTDKILYWTQSAL-HAMP-DPLWISD-DGYLSSV--WLPLSPI 411
            + + L+   + +A      + L   +  +   +   P +     G+ S    W    P 
Sbjct: 317 RLFYRLMDYHLAEAEEGRAKESLILLRKMVGEQIRTKPDYRCHKCGFTSRSLYWH--CPS 374

Query: 412 SKTLCYF 418
            ++    
Sbjct: 375 CRSWDTI 381


>gi|116747525|ref|YP_844212.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696589|gb|ABK15777.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
          Length = 567

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 51/293 (17%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLY 161
           A +  S       F        L  Q  ++ ++ + A E   E + + P +    +  L 
Sbjct: 34  AARSESGSRADLYFEY------LLAQYYVSVKEIDKAIEAYHEALKKDPRSPML-LTELA 86

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
               R G +  A +    A             + Q Y    + +RAI   ++  +     
Sbjct: 87  ALLIRQGKIEQALKLTEDATSFDRTYEPAYMLLGQLYAGIGQNARAIDAYSRAIEINP-- 144

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +   A LL+        K D      D +++  L  ++ +A    A+  +     ++AE 
Sbjct: 145 SNEDAHLLLGALYAQEKKYDEAMEAFDHLKA--LLPDNPVALYYKARVFLDMKLYKQAEK 202

Query: 282 I------LEKIWKVNPHPEIANIY--------------------------------THLL 303
           I      +E  ++     ++A +Y                                 ++ 
Sbjct: 203 IYLDVLAIEPAFENASL-DLAYVYEVTERLKDAEQTYLQILSANPANVNARTRLGNLYMR 261

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +     L+    L ++N++ VES + V  I L+    ++A       +K  P
Sbjct: 262 QDRPAEALRHFSHLLKLNRKDVESRLKVGIIHLQQKDYEEAIKDFTYLLKDEP 314



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 18/182 (9%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ------IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
             +     +   A +    +L          TR   +Y       R      A R+ +  
Sbjct: 222 AYVYEVTERLKDAEQTYLQILSANPANVNARTRLGNLY------MRQDRPAEALRHFSHL 275

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L ++         V   ++  K++  AI       K+  ++++     L   +   A+K 
Sbjct: 276 LKLNRKDVESRLKVGIIHLQQKDYEEAIKDFTYLLKDEPQYDQ----ALYYLASTYAEKQ 331

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           D   +  +     +      MA    A     Q   +    +L++       PE+A++Y 
Sbjct: 332 DFEQAIRNFRLIARSSPLWPMAQTRLALIFSKQKDFQNGAAVLKEAIDAQ--PEVADLYL 389

Query: 301 HL 302
           +L
Sbjct: 390 YL 391



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 18/174 (10%)

Query: 144 EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
             +++ P  T       +  +     D   A     + L+I P        +   Y    
Sbjct: 410 RGLVKTPRDTDLLFRKGVILDKMSRRDDAIAVM--KRILEIEPQNANALNYIGYTYAEMG 467

Query: 203 -EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              + A   +      A +       ++ + +      G    +    +E+LK      +
Sbjct: 468 INLNEARQMIKAALATAPD----DGYIMDSLAWVYYKLGQHKKALETILEALKRVPQDPV 523

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                    +S  KK +A    EK          A  Y+H   E    KL R  
Sbjct: 524 IHEHLGDIYLSLGKKNEAIEAYEK----------ALEYSHTEPEKIREKLDRLK 567



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 15/162 (9%)

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             ++  +R         +       ++  +     E+LK    S M     A  LI Q K
Sbjct: 35  ARSESGSRADLYFEYLLAQYYVSVKEIDKAIEAYHEALKKDPRSPMLLTELAALLIRQGK 94

Query: 276 KRKAEVILEKI--WKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             +A  + E    +     P    +  +Y  +        +    R  EIN  + ++ ++
Sbjct: 95  IEQALKLTEDATSFDRTYEPAYMLLGQLYAGI--GQNARAIDAYSRAIEINPSNEDAHLL 152

Query: 331 VSKIALEMGSIDQAHA---KAMLAMKIAP-----RKEIFLLL 364
           +  +  +    D+A          +   P     +  +FL +
Sbjct: 153 LGALYAQEKKYDEAMEAFDHLKALLPDNPVALYYKARVFLDM 194


>gi|219847306|ref|YP_002461739.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
            DSM 9485]
 gi|219541565|gb|ACL23303.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM
            9485]
          Length = 1424

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 101/363 (27%), Gaps = 73/363 (20%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQ---QHTFHNEY--------LVYLLEVQIALAERQYNIA 139
             L+  +  +   AR ++        +    +          L  LLE Q          A
Sbjct: 953  ALLLASQGDYAAARPLYERALAISERALGPDHPDTATSLNNLALLLESQ-----GDDAAA 1007

Query: 140  HEKLEMMLQIPATREFA---------VYSLYFESCRIGDLNSAQRYATKALD-----ISP 185
                E  L I   R            +++L       GD  +A+    +AL      + P
Sbjct: 1008 RPLYERALAIRE-RALGPDHPDTATSLHNLARLLYHQGDYAAARPLYERALAIYERALGP 1066

Query: 186  DAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENAD 238
            D P    ++           +++ A   + +     +      +   A  L   +   A 
Sbjct: 1067 DHPQTATSLNNLAGLLASQGDYAAARPLVERALAIRERALGPDHPQTATSLTNLAGLLAS 1126

Query: 239  KGDMIASYHDAIESLK-----LCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKVN 290
            +GD  A+      +L      L  +    +      A+ L  Q     A  + E+   + 
Sbjct: 1127 QGDYAAARPLYERALAIYERALGPDHPQTATSLHNLARLLYHQGDYAAARPLYERALAIR 1186

Query: 291  P------HPEIANIYTHL------LSENTVGKLKRALRLE----EINKESVE---SLVIV 331
                   HP+ A    +L        ++   +      L      +  +  +   SL  +
Sbjct: 1187 ERALGPDHPDTAASLHNLAGLLYHQGDDAAARPLYERALAIYERALGPDHPDTATSLHNL 1246

Query: 332  SKIALEMGSIDQAHAKAMLAMKI--------APRKEIFLLLAQIEQANSHNTDKILYWTQ 383
            + +    G    A      A+ I         P     L    +  A+  +        +
Sbjct: 1247 AGLLYHQGDYAAARPLYERALAIYERALGPDHPDTATSLNNLALLLASQGDDAAARPLYE 1306

Query: 384  SAL 386
             AL
Sbjct: 1307 RAL 1309



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 77/294 (26%), Gaps = 51/294 (17%)

Query: 115  TFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYS---------LYFE 163
                     LL V   L   +  Y  A    E  L I   R               L   
Sbjct: 771  ALDERSAAQLLMVTAGLLYHQGDYAAARPLYERALAISE-RALGPDHPQTATSLNNLALL 829

Query: 164  SCRIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKK 215
                GD  +A+    +AL I      PD P    ++           +++ A     +  
Sbjct: 830  LASQGDYAAARPLYERALAIRERALGPDHPDTAASLHNLALLLASQGDYAAARPLYERAL 889

Query: 216  K---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                      +         +  + +   +      +     AI    L  +    +   
Sbjct: 890  AIRERALGPDHPDTATSLDNLAYLLQQQGDYAAARPLYERALAIRERALGPDHPQTATSL 949

Query: 267  ---AKSLISQNKKRKAEVILEKIWKVNP------HPEIA------NIYTHLLSENTVGK- 310
               A  L SQ     A  + E+   ++       HP+ A       +      ++   + 
Sbjct: 950  HNLALLLASQGDYAAARPLYERALAISERALGPDHPDTATSLNNLALLLESQGDDAAARP 1009

Query: 311  ------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                    R   L   + ++  SL  ++++    G    A      A+ I  R 
Sbjct: 1010 LYERALAIRERALGPDHPDTATSLHNLARLLYHQGDYAAARPLYERALAIYERA 1063



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 89/322 (27%), Gaps = 55/322 (17%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHT----FHNEYLVYLLEVQIALAE--RQYNIAHEKLE 144
             L+  +  +   AR ++              +      L+    L +    Y  A    E
Sbjct: 869  ALLLASQGDYAAARPLYERALAIRERALGPDHPDTATSLDNLAYLLQQQGDYAAARPLYE 928

Query: 145  MMLQIPATREFA---------VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWV 190
              L I   R            +++L       GD  +A+    +AL IS     PD P  
Sbjct: 929  RALAIRE-RALGPDHPQTATSLHNLALLLASQGDYAAARPLYERALAISERALGPDHPDT 987

Query: 191  TEAVVQQYVL---AKEWSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENAD 238
              ++    +L     + + A     +            +         +  +     +  
Sbjct: 988  ATSLNNLALLLESQGDDAAARPLYERALAIRERALGPDHPDTATSLHNLARLLYHQGDYA 1047

Query: 239  KGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKVNP---- 291
                +     AI    L  +    +      A  L SQ     A  ++E+   +      
Sbjct: 1048 AARPLYERALAIYERALGPDHPQTATSLNNLAGLLASQGDYAAARPLVERALAIRERALG 1107

Query: 292  --HPEIANIYTHL------LSENTVGKLKRALRLE----EINKESVE---SLVIVSKIAL 336
              HP+ A   T+L        +    +      L      +  +  +   SL  ++++  
Sbjct: 1108 PDHPQTATSLTNLAGLLASQGDYAAARPLYERALAIYERALGPDHPQTATSLHNLARLLY 1167

Query: 337  EMGSIDQAHAKAMLAMKIAPRK 358
              G    A      A+ I  R 
Sbjct: 1168 HQGDYAAARPLYERALAIRERA 1189



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 88/318 (27%), Gaps = 56/318 (17%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHT----FHNEYLVYLLEVQIALAE--RQYNIAHEKLE 144
            GL++ +  +   AR +               +      L     L      Y  A    E
Sbjct: 1080 GLLA-SQGDYAAARPLVERALAIRERALGPDHPQTATSLTNLAGLLASQGDYAAARPLYE 1138

Query: 145  MMLQIPATREFA---------VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWV 190
              L I   R            +++L       GD  +A+    +AL I      PD P  
Sbjct: 1139 RALAIYE-RALGPDHPQTATSLHNLARLLYHQGDYAAARPLYERALAIRERALGPDHPDT 1197

Query: 191  TEAVVQQYVL---AKEWSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENAD 238
              ++     L     + + A     +            +         +  +     +  
Sbjct: 1198 AASLHNLAGLLYHQGDDAAARPLYERALAIYERALGPDHPDTATSLHNLAGLLYHQGDYA 1257

Query: 239  KGDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
                +     AI    L  +    +      A  L SQ     A  + E+   +      
Sbjct: 1258 AARPLYERALAIYERALGPDHPDTATSLNNLALLLASQGDDAAARPLYERALAIRERALG 1317

Query: 292  --HPEIANIYTHL------LSENTVGK--LKRALRLE--EINKESVESLVIV---SKIAL 336
              HP+ A   T+L        ++   +   +RAL +    +  +  ++   +   + +  
Sbjct: 1318 PDHPDTAASLTNLALLLASQGDDAAARPLFERALAIYERALGPDHPDTAASLNNLAGLLA 1377

Query: 337  EMGSIDQAHAKAMLAMKI 354
              G    A      A++I
Sbjct: 1378 SQGDYAAARPLFERALRI 1395


>gi|15602663|ref|NP_245735.1| hypothetical protein PM0798 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721102|gb|AAK02882.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 395

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 62/193 (32%), Gaps = 41/193 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151
             +  A ++H  +    +    +   LL  Q     +       Y+ A     +++  P 
Sbjct: 91  GEVDRALRIHQALD--RSPDYTFEQKLLAKQ--QLAKDFMAVGFYDRAEMLYILLVDEPE 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             E A+  L     +  +   A   A K   ISP        + Q Y             
Sbjct: 147 FAENALQQLAVLYQKTKEWEKAINVAEKLAKISPQ--ENNIELAQYYCE----------- 193

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                             +A+SL   +K          + +LK+  N + ASI   + LI
Sbjct: 194 ------------------LAQSLSLEEKTQQERQKGLLVSALKVAPNCVRASILLGQLLI 235

Query: 272 SQNKKRKAEVILE 284
            + + ++A + LE
Sbjct: 236 QEKRYQQAVMTLE 248


>gi|87303254|ref|ZP_01086047.1| hypothetical protein WH5701_12388 [Synechococcus sp. WH 5701]
 gi|87282149|gb|EAQ74110.1| hypothetical protein WH5701_12388 [Synechococcus sp. WH 5701]
          Length = 783

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 74/225 (32%), Gaps = 10/225 (4%)

Query: 132 AERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               +  A   + ++ +          ++  +  E+   GD+ +A     +AL+ SP   
Sbjct: 27  LAPDHLGARSAIALLERRRVSKPIDLSSLIQIAEEAYSQGDIRTALASFERALEQSPGQR 86

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +  A  + +   ++  +A   L    +       +    L+  +     +    A+   
Sbjct: 87  DLRAATARCHRELRQHKKAEAILAALLEEEPTHFSS----LLGMAELEDHRQQPAAAIRW 142

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSE 305
              +L    +        A  L+   +   A+ +LE   + +PH P +  A    H  S 
Sbjct: 143 YRLALDQRPDHQALRATLALCLLRSGEWAAAQELLEHALRDSPHEPTLLVARRDLHAASG 202

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                L  + +L  ++  +    +    +  ++   ++A      
Sbjct: 203 ELEQALALSQQLLAVDPATPWHHLSHVHLLRQLQRFEEALIALEA 247



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 7/155 (4%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQ---YNIAHEKLEMMLQIPATREFAVYSLYF 162
             +  S +           L    A   R+   +  A   L  +L+   T   ++  +  
Sbjct: 69  RTALASFERALEQSPGQRDLRAATARCHRELRQHKKAEAILAALLEEEPTHFSSLLGMAE 128

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                    +A R+   ALD  PD   +   +    + + EW+ A   L    +++    
Sbjct: 129 LEDHRQQPAAAIRWYRLALDQRPDHQALRATLALCLLRSGEWAAAQELLEHALRDSP--- 185

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +   LL+AR   +A  G++  +   + + L +  
Sbjct: 186 -HEPTLLVARRDLHAASGELEQALALSQQLLAVDP 219


>gi|321469627|gb|EFX80606.1| hypothetical protein DAPPUDRAFT_303888 [Daphnia pulex]
          Length = 926

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             G    ++   + +L+  P   + W+  A  ++             L    + A     
Sbjct: 537 SQGAFECSRAVYSHSLETFPAKKSIWLRAAHFERQ------HGTRDSLESLLQRAVAHCP 590

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +L +  +      GD+ A+      + +   NS    + A K      +  +A  +L
Sbjct: 591 QAEVLWLMGAKSKWLAGDVPAARSILSLAFQANPNSEEIWLAAVKLESENWEYERARKLL 650

Query: 284 EKIWKVNPHPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            K     P P +      L     +    LK+     E   +  +  ++  +I +    +
Sbjct: 651 AKARNSAPTPRVLMKSAKLEWHLGDLAEALKQLQTAIEQFPDYPKFYMMQGQIHVLQQRM 710

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSA 385
            QA     L  +  P    ++LLLA+++++   N  +     + A
Sbjct: 711 TQARESYNLGTRKCPTSVPLWLLLARLDESQ-GNMTRARSVLEKA 754



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 91/257 (35%), Gaps = 36/257 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--- 223
            GD+ +A+   + A   +P++  +  A V+      E+ RA   L + + +A        
Sbjct: 606 AGDVPAARSILSLAFQANPNSEEIWLAAVKLESENWEYERARKLLAKARNSAPTPRVLMK 665

Query: 224 -----------NRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257
                        A+  +  ++E               +  +  M  +        + C 
Sbjct: 666 SAKLEWHLGDLAEALKQLQTAIEQFPDYPKFYMMQGQIHVLQQRMTQARESYNLGTRKCP 725

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR- 316
            S+   +  A+   SQ    +A  +LEK  + N  P+ + ++   +       LK     
Sbjct: 726 TSVPLWLLLARLDESQGNMTRARSVLEKARQKN--PQNSQLWLEAIRLEWKTGLKDIASA 783

Query: 317 -LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHN 374
            + +  ++   S ++ S+  + +    Q   K++ A+K       + L ++++       
Sbjct: 784 MMAKALQDCPISGLLWSET-IFIVDRPQRKTKSVDALKKCEHDPHVLLAVSKLFWTERK- 841

Query: 375 TDKILYWTQSALHAMPD 391
           T K   W   A+   PD
Sbjct: 842 TQKCREWFNRAVKIDPD 858


>gi|224078337|ref|XP_002197944.1| PREDICTED: similar to U5 snRNP-associated 102 kDa protein
           [Taeniopygia guttata]
          Length = 938

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 576 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 633

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 634 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 693

Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++ +                  +  +     + LK C +SI   +  ++     
Sbjct: 694 LCEEALKHYEDFPKLWMMKGQIEEQKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKV 753

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P++      L     +  +  A  L     +E   S ++ 
Sbjct: 754 GQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 811

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 812 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 869

Query: 391 D 391
           D
Sbjct: 870 D 870



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 285 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 341

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 342 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 393

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 394 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 446

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 447 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 492


>gi|83860015|ref|ZP_00953535.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852374|gb|EAP90228.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633]
          Length = 649

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 15/235 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+G    A   A KAL   P  P +T    +      +   AI  +    +   ++   
Sbjct: 34  RRLGRPADALNLARKALRQFPGHPGLTLEAARSEAATGQLDAAIARMEALARARPDFPPA 93

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L   R      +G  + +      S       + A+      LI   K  +AE +L 
Sbjct: 94  WRTLAELRERAGDAEG-ALEAAKQQAASAAQSPELLEAA-----RLIQDGKLGRAEALLR 147

Query: 285 KIWKVNPH-----PEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
              K +P        +A++   L + E++   L+RAL L     +   +    +   +++
Sbjct: 148 PYVKAHPTDVSGIRLLADVALRLGVFEDSRKLLERALELA---PDFHMARHDYANCLIKL 204

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
              ++A  +     +  P +    +L  + +  + +  +        L   PD  
Sbjct: 205 QRFEEAETQLDRLERAEPDRPSHAILKALLRVRTGHHQEACEIYARILKDNPDQA 259



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 65/203 (32%), Gaps = 10/203 (4%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A +   A +     +       E    LLE    + + +   A   L   ++   T    
Sbjct: 104 AGDAEGALEAAKQQAASAAQSPE----LLEAARLIQDGKLGRAEALLRPYVKAHPTDVSG 159

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L   + R+G    +++   +AL+++PD            +  + +  A T L++ ++
Sbjct: 160 IRLLADVALRLGVFEDSRKLLERALELAPDFHMARHDYANCLIKLQRFEEAETQLDRLER 219

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +   +     I ++L     G    +       LK   +     +    +L +  ++
Sbjct: 220 AEPDRPSH----AILKALLRVRTGHHQEACEIYARILKDNPDQARIQLSYGHALKTIGQR 275

Query: 277 RKAEVILEKIWKVNPHPEIANIY 299
             A           P   +   Y
Sbjct: 276 EDAVAAYRAAITAEPT--LGEAY 296



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 85/262 (32%), Gaps = 11/262 (4%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  ++        F     + L   +   A  Q + A  ++E + +       A  +
Sbjct: 37  GRPADALNLARKALRQFPGHPGLTLEAARSEAATGQLDAAIARMEALARARPDFPPAWRT 96

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NA 218
           L     R GD   A   A +    +  +P + EA   + +   +  RA   L    K + 
Sbjct: 97  LAELRERAGDAEGALEAAKQQAASAAQSPELLEA--ARLIQDGKLGRAEALLRPYVKAHP 154

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            + +  R +  +A  L   +      S      +L+L  +  MA    A  LI   +  +
Sbjct: 155 TDVSGIRLLADVALRLGVFED-----SRKLLERALELAPDFHMARHDYANCLIKLQRFEE 209

Query: 279 AEVIL---EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           AE  L   E+     P   I      + + +     +   R+ + N +     +      
Sbjct: 210 AETQLDRLERAEPDRPSHAILKALLRVRTGHHQEACEIYARILKDNPDQARIQLSYGHAL 269

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
             +G  + A A    A+   P 
Sbjct: 270 KTIGQREDAVAAYRAAITAEPT 291


>gi|332524931|ref|ZP_08401117.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
 gi|332108226|gb|EGJ09450.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
          Length = 925

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 78/269 (28%), Gaps = 11/269 (4%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-AQRYATKALD 182
           LL     +A+ ++  A    E  L+   +    +  L   S  +G     A      +  
Sbjct: 376 LLLASAQIAQGRHTRAAATAEQALRTQDS--APMRGLLGLSLAVGGRVPDALDALEASFK 433

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             P       A+ Q  + A +  RA   L    ++    +  +A LL       A  GD 
Sbjct: 434 ADPKQLATGTALAQIRLQAGDTRRATQVLQTLLQH----HPKQAGLLNLLGSAKARGGDA 489

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK---VNPHPEIANIY 299
             +     ++L +    +   +  A+      K   A+  L++          P +A   
Sbjct: 490 AGARQAFEQALVVDPAFVSPQVQLARLDADAGKFDAAQQRLQQALAKDDKALEPTLAMAQ 549

Query: 300 THLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                       +   + ++I     ++  + + +  L  G  + A          AP  
Sbjct: 550 LAERRGRLDDARRWYEKADDIAGPNVIDPALELVEFLLRQGQPEAAREAGKRLSNRAPEA 609

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALH 387
              L+        + +          A  
Sbjct: 610 VPVLIALARISLANDDEAGARTGLNRAST 638



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 91/295 (30%), Gaps = 12/295 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
               +   AR+                V L   ++     +++ A ++L+  L       
Sbjct: 484 ARGGDAAGARQAFEQALVVDPAFVSPQVQL--ARLDADAGKFDAAQQRLQQALAKDDKAL 541

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
               ++   + R G L+ A+R+  KA DI+ P+       +V+  +   +   A     +
Sbjct: 542 EPTLAMAQLAERRGRLDDARRWYEKADDIAGPNVIDPALELVEFLLRQGQPEAAREAGKR 601

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
               A E       +LIA +  +    D   +      +  L D+ + A    A   +  
Sbjct: 602 LSNRAPEA----VPVLIALARISLANDDEAGARTGLNRASTLADHDVGALARIAVLQLQA 657

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVI 330
           N  + A+  L K     P+            +         KRA  +   N +      +
Sbjct: 658 NHPQGAQHTLTKALTERPNSLPLQALMVDAEIRLGELAAAEKRARTIATQNPKLAVGPSL 717

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL-AQIEQANSHNTDKILYWTQ 383
           +  +A   G    A      A ++ P    +  LL A   Q           W  
Sbjct: 718 LGDVATARGQRAAAIDAYRTAHRLQPGTDTLLRLLRATAPQDPQGAQKLAEQWLA 772



 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 62/228 (27%), Gaps = 24/228 (10%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L   +A A  Q   A +      ++    +  +      +    D   AQ+ A + L   
Sbjct: 717 LLGDVATARGQRAAAIDAYRTAHRLQPGTDTLLR--LLRATAPQDPQGAQKLAEQWLASH 774

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMI 243
           P    V   +   Y    +W  A        K   ++      +  +        +    
Sbjct: 775 PRDAVVRRVLADGYARLGQWPAARDAYQALLKLTPEDAEAWNNLAHVQL------RQKDG 828

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           A+   A  +L L          A  +     +  KA   L +    +P            
Sbjct: 829 AALASAERALALKPGVPHIVGTAGWAAFHAGQTDKALQRLREARLRDP------------ 876

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             N   +   A  L      S E+   + + AL   +  +A     L 
Sbjct: 877 -GNPTTRFYLATVLARSG-RSAEAREEL-QAALRSQNFAEAQDAQALL 921



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 64/185 (34%), Gaps = 9/185 (4%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            +A+ +L   +++       + +  I  S  N DK     +       L+       A++
Sbjct: 322 EKALPYLEAVQRSQPGSGAAKLVAQIQISQNNLDK-----AIESLEGYLRRNPADTQATL 376

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
             A + I+Q +  +A    E+  +     P   +  +    +       L       + +
Sbjct: 377 LLASAQIAQGRHTRAAATAEQALRTQDSAPMRGLLGLSL-AVGGRVPDALDALEASFKAD 435

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
            + + +   +++I L+ G   +A       ++  P++   L L    +A   +       
Sbjct: 436 PKQLATGTALAQIRLQAGDTRRATQVLQTLLQHHPKQAGLLNLLGSAKARGGDAAGARQA 495

Query: 382 TQSAL 386
            + AL
Sbjct: 496 FEQAL 500


>gi|261867397|ref|YP_003255319.1| HemY protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412729|gb|ACX82100.1| HemY protein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 416

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 13/170 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++    ++   + +   +S     V I   + +   S   I +++ FF+ A  L+++
Sbjct: 1   MVRVLFLMLLLLAGLIAGPYLSGKQGYVRIETASNIIEMS---ITTLVIFFVIALALVYS 57

Query: 61  V---SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
           +      F       +    +R   K  K    GLM +   +   A K+    ++     
Sbjct: 58  IEVAISRFFRLSNNTYSWFSRRKRAKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SD 115

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
              L ++   + A        A+  L     I AT      SL  E  R 
Sbjct: 116 EPVLNFIKAAEAAQQRGDEFSANRYL-----IEATEIAGSDSLILEIART 160


>gi|119505039|ref|ZP_01627115.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
 gi|119459021|gb|EAW40120.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
          Length = 403

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 111/355 (31%), Gaps = 60/355 (16%)

Query: 59  FAVSR-----FFLSC----PAMLFH---MLHKRNYDKGYKALYTGL----------MSIA 96
           + + R              P+  +     L   + D    A    L          +++ 
Sbjct: 18  WWLGRRGNRPLIWGSSAQPPSEYYRGLNFLLDGSQDNAIDAFTQALEVNAETFDTHIALG 77

Query: 97  A-----HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQI 149
                   +  A ++H  +  + +     L   +L   +  ++    + A + L  ++  
Sbjct: 78  NVLRRRGEVERAIRVHQNLLARPSLPQTQLHLAHLELARDYISAGLLDRAEKLLIDLVAE 137

Query: 150 PAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               R  A   L        D ++A   A +              ++ +  L K    A 
Sbjct: 138 SGNHRRVARRHLLEIYEAQRDWSAACDVAEE--------------LLPKRSLIKSADNAA 183

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +       +      A     ++     +GD         ++L+     + A++    
Sbjct: 184 DEV------GQPVGVLLAHYYCEQAELARVRGDYGEGRELLAKALRYDKVCVRATLSLGA 237

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-- 326
             +S  +  ++  IL+ ++   P   +A + T L+ E  +  L     L    +   E  
Sbjct: 238 LELSAGQPEQSIKILKTVFDQGPE-YLAEV-TPLMRE-AMDSLGIRKNLRSYLEGCFERT 294

Query: 327 --SLVIVSKIALEMGSI--DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTD 376
             + + ++      G+I  D A     L++K  P    + LL++  +   + + +
Sbjct: 295 PTTPLALAIAHELHGTIGNDAAKKFLRLSLKDKPSLRGVALLMSLHDSTEAGDDE 349


>gi|301160155|emb|CBW19675.1| putative polysaccharide biosynthesis protein subunit C [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|323131976|gb|ADX19406.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 1180

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109
           D  ++A   G+ ++ A     A                                R +  +
Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469

Query: 214 KKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 470 SQRRSIDDIELSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634


>gi|83415184|ref|NP_787057.2| transmembrane and TPR repeat-containing protein 1 isoform 2 [Homo
           sapiens]
 gi|269849473|sp|Q8IUR5|TMTC1_HUMAN RecName: Full=Transmembrane and TPR repeat-containing protein 1
 gi|119617007|gb|EAW96601.1| hCG2009560, isoform CRA_d [Homo sapiens]
          Length = 774

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 382 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 438

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 439 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 498

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 499 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 558

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 559 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 614

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 615 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 673

Query: 389 MPDP 392
             DP
Sbjct: 674 PKDP 677



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 515 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 572

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 573 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 630

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 631 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 684

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 685 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 720

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 721 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 762


>gi|296115892|ref|ZP_06834516.1| cellulose synthase protein C [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977580|gb|EFG84334.1| cellulose synthase protein C [Gluconacetobacter hansenii ATCC
           23769]
          Length = 1268

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 108/311 (34%), Gaps = 37/311 (11%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +  + R++ +  + +     E L  +     AL+  + + A       +Q       A+ 
Sbjct: 279 DGEMRRRLATVEAARA--QAERLALVGAGYHALSHGELDQAESDFHNSMQSDPPHAEALE 336

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE------WS------- 205
            L   + R GDL SA+ + T+AL+++P    + +A+        +      W+       
Sbjct: 337 GLGLVAQRRGDLKSARNFLTQALNLAPGNAGIRDALAGLDAPGGDPQLARLWALVAHHEY 396

Query: 206 -RAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
             A   L   +K + +  +  R   +I +S           +       L+L    + A+
Sbjct: 397 EEAWAMLPAVEKDHGRIVDTLRVRAIIEQSRHQLGD-----AEAAWRGVLRLVPGDMPAA 451

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEI 320
              +  L+ + K  +AE  + ++ K   +P    + +     ++E      KR + LE+ 
Sbjct: 452 ASLSDVLVEEGKIHEAEGWIARL-KAARYPGVTALESGVLGAMAEAETDPRKRIVLLEQA 510

Query: 321 NKESVES---LVIVSKIALEMGSIDQAHAKAM----LAMKIAPRKEIFLLLAQIEQANSH 373
            +++  +    + +++     G   +A            K+    +   + A        
Sbjct: 511 LRDAPHNGWLRLHLAQAWWVQGQPTRARNLMAVLCDPLPKMNGDVQACFIFA----LQDQ 566

Query: 374 NTDKILYWTQS 384
           +  +       
Sbjct: 567 DMPRADALLAR 577



 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 28/195 (14%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A     +AL I PD       +    V   +   A   L                
Sbjct: 69  GDDAHALHALQRALRIEPDNIEARLMLGAVQVHHGDLIAARATLQ--------------- 113

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
             I ++ +  D    +A+    I    +       ++  A+++  + K  +A +    ++
Sbjct: 114 --ILQAQQGTDA--QVAALRGWIGQEPIDPG----ALANARAVADRGKPLQATLAYRTVF 165

Query: 288 K-VNPHPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKI-ALEMGSID 342
           +  +P PE    Y  +L+ + +     ++R   L  I    +E  + +++  +    S  
Sbjct: 166 RAAHPLPEQELEYDRVLAGSLLGYGEAIQRLRALGAIFPHDLEVRMALAQALSYRAASRP 225

Query: 343 QAHAKAMLAMKIAPR 357
            A     +       
Sbjct: 226 DAIEDMRVLATSPTT 240


>gi|15229253|ref|NP_187074.1| SEC (secret agent); transferase, transferring glycosyl groups
           [Arabidopsis thaliana]
 gi|75336082|sp|Q9M8Y0|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SEC; AltName:
           Full=Protein SECRET AGENT
 gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana]
 gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana]
 gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
 gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
 gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana]
 gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SEC [Arabidopsis
           thaliana]
          Length = 977

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 89/269 (33%), Gaps = 21/269 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A +  + V Q++    + L  L+       +          E +   P  +    
Sbjct: 67  GDFKQALEHSNMVYQRNPLRTDNL-LLIGAIYYQLQEYDMCIARNEEALRIQP--QFAEC 123

Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           Y     +    GD + A RY   A+++ P+       +   Y+     S A     Q   
Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALS 183

Query: 217 NAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 + + N   L+ A+ L +        +Y   +E++++     +A    A   +  
Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIH-------EAYSCYLEAVRIQPTFAIAWSNLAGLFMES 236

Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
               +A    ++  K+ P  P+    + N+Y  L        +       ++   S  + 
Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKAL--GRPTEAIMCYQHALQMRPNSAMAF 294

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             ++ I  E G +D A      A+   PR
Sbjct: 295 GNIASIYYEQGQLDLAIRHYKQALSRDPR 323



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 14/186 (7%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  L++ Q        + A+      ++I  T   A  +L       GDLN A +Y  +A
Sbjct: 195 LGNLMKAQ-----GLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEA 249

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P  P     +   Y      + AI       +         A+     +    ++G
Sbjct: 250 VKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNS----AMAFGNIASIYYEQG 305

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295
            +  +     ++L      + A      +L    +  +A     +   + P HP+    +
Sbjct: 306 QLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANL 365

Query: 296 ANIYTH 301
            NIY  
Sbjct: 366 GNIYME 371


>gi|222423063|dbj|BAH19513.1| AT3G04240 [Arabidopsis thaliana]
          Length = 750

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 89/269 (33%), Gaps = 21/269 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A +  + V Q++    + L  L+       +          E +   P  +    
Sbjct: 67  GDFKQALEHSNMVYQRNPLRTDNL-LLIGAIYYQLQEYDMCIARNEEALRIQP--QFAEC 123

Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           Y     +    GD + A RY   A+++ P+       +   Y+     S A     Q   
Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALS 183

Query: 217 NAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 + + N   L+ A+ L +        +Y   +E++++     +A    A   +  
Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIH-------EAYSCYLEAVRIQPTFAIAWSNLAGLFMES 236

Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
               +A    ++  K+ P  P+    + N+Y  L        +       ++   S  + 
Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKAL--GRPTEAIMCYQHALQMRPNSAMAF 294

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             ++ I  E G +D A      A+   PR
Sbjct: 295 GNIASIYYEQGQLDLAIRHYKQALSRDPR 323



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 14/186 (7%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  L++ Q        + A+      ++I  T   A  +L       GDLN A +Y  +A
Sbjct: 195 LGNLMKAQ-----GLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEA 249

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P  P     +   Y      + AI       +         A+     +    ++G
Sbjct: 250 VKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNS----AMAFGNIASIYYEQG 305

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295
            +  +     ++L      + A      +L    +  +A     +   + P HP+    +
Sbjct: 306 QLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANL 365

Query: 296 ANIYTH 301
            NIY  
Sbjct: 366 GNIYME 371


>gi|303251060|ref|ZP_07337246.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|302650070|gb|EFL80240.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 416

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   +     +S     V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLLLASLIFGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +   F       ++    R + K  +    GLM ++  +   A K+ S  ++     +E 
Sbjct: 61  IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           ++ L++  + A        A++                  L   +   G  N A   A  
Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160

Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            + +     P A    +++++        +  +       K++K +N    IL
Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210


>gi|221127660|ref|XP_002161502.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 984

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 97/280 (34%), Gaps = 17/280 (6%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAH 140
           GY  L   L++  A ++  A + ++               L  LL+        +   A 
Sbjct: 120 GYINLAAALVA--AGDLEGAVQAYATALNYNPDLYCVRSDLGNLLKA-----LGRLEEAK 172

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                 ++       A  +L        ++  A  +  KA+ I P+       +      
Sbjct: 173 ACYLKAIETQPNFAVAWSNLGCVFNAQSEIWLAIHHFEKAVQIDPNFLDAYINLGNVLKE 232

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A+ + RA+T   +          N AI+    +    ++G +  +      +++L  N  
Sbjct: 233 ARIFDRAVTAYLRALTINP----NHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFP 288

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTV--GKLKRALRL 317
            A    A +L  Q K   AE   +   ++ P H +  N   ++  E  +    ++   + 
Sbjct: 289 DAYCNLANALKEQGKVEDAEDCYDTALQLCPTHADSLNNLANIKREQGLIEDSIRLYCKA 348

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            E+  E   +   ++ I  + G + +A      A++I P 
Sbjct: 349 LEVFPEFAAAHSNLASILQQQGKLHEALIHYKEAIRIHPT 388



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   +    Q    H + L  L    I   +     +     + +   P     A
Sbjct: 302 GKVEDAEDCYDTALQLCPTHADSLNNL--ANIKREQGLIEDSIRLYCKALEVFPEF-AAA 358

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L+ A  +  +A+ I P        +       ++   AI   ++  +
Sbjct: 359 HSNLASILQQQGKLHEALIHYKEAIRIHPTFADAYSNMGNALKEMQDVEGAIQCYSRAIQ 418

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +    D G++  +      +LKL  +   A    A  L
Sbjct: 419 INPAF----ADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPDAYCNLAHCL 468



 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 66/217 (30%), Gaps = 26/217 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A +  +  LQ+  T   ++ +L       G +  + R   KAL++ P+
Sbjct: 295 ANALKEQGKVEDAEDCYDTALQLCPTHADSLNNLANIKREQGLIEDSIRLYCKALEVFPE 354

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS---LENADKGDMI 243
                  +        +       L++   + KE  R       A S       +  D+ 
Sbjct: 355 FAAAHSNLASILQQQGK-------LHEALIHYKEAIRIHPTFADAYSNMGNALKEMQDVE 407

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANI 298
            +      ++++      A    A          +A    +   K+ P  P+    +A+ 
Sbjct: 408 GAIQCYSRAIQINPAFADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPDAYCNLAHC 467

Query: 299 YTHLLSENTVG-KLKRA----------LRLEEINKES 324
              +   +    ++K+            RL  ++   
Sbjct: 468 LQIICDWSGYDNRMKKLLAIVDEQLGKNRLPSVHPHH 504


>gi|182412316|ref|YP_001817382.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177839530|gb|ACB73782.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
          Length = 586

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/327 (17%), Positives = 119/327 (36%), Gaps = 35/327 (10%)

Query: 93  MSIAAHNIPLAR---KMHSYVSQQHTFHNEYLVYLLE-----------VQIALAERQYNI 138
           +  AA +   A+   ++     ++    + ++  LLE            Q   AE++ ++
Sbjct: 216 LHAAAGDPVRAQQEQRLLERADRRLGMPDPWMEELLEHCYEPNRLQRAAQRFAAEKRLDL 275

Query: 139 AHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           A   L     +     T   A+  L   S RI D   A+    +AL   PD P V  A+ 
Sbjct: 276 AESLLRRATSLSPADPTPRSALAQLLVSSERIRD---ARTVLEQALVECPDEPMVPIALA 332

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +         + +  +   +     W    A L  A      D  +   +     E+L+L
Sbjct: 333 RVLCQEH---KPLEAVAIAQAALACWP-EHAGLHAAVGYAWRDARENETALAALREALRL 388

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGKLK 312
               + A    A  L++  ++  A+V +++   + P +PE   +     L + +     +
Sbjct: 389 NPTLVEAQYNLAFCLMALRQREAAQVAVQRALTLRPDYPEALVMLGGLELDNGDVAAAQR 448

Query: 313 RALRLEEINKESVESLVIVSKI-------ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             L L E+  +   S ++ + +       A +    ++A  +    ++++P+    L   
Sbjct: 449 HILALFELRPDEPGSRLLYAALHHELGNRARDERKFEEADRRYRAGLEVSPQFAPLLHEG 508

Query: 366 QIEQANSHNTDKILYWTQSALH-AMPD 391
            +  A      +++ W +  L  A  D
Sbjct: 509 ALLAARRAQYGQVVEWLERYLRLAPRD 535



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 70/199 (35%), Gaps = 18/199 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           +  +A     +AL ++P        +    +  ++   A   + +      ++    A++
Sbjct: 374 ENETALAALREALRLNPTLVEAQYNLAFCLMALRQREAAQVAVQRALTLRPDYP--EALV 431

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286
           ++       D GD+ A+    +   +L  +   + +  A        + + E   E+   
Sbjct: 432 MLGGL--ELDNGDVAAAQRHILALFELRPDEPGSRLLYAALHHELGNRARDERKFEEADR 489

Query: 287 -WKVNPHPEIANIYTHLLSENTVGKLKRA---------LRLEEINKESVESLVIVSKIAL 336
            ++     E++  +  LL E  +   +RA          R   +    +E+ +++++   
Sbjct: 490 RYRAGL--EVSPQFAPLLHEGALLAARRAQYGQVVEWLERYLRLAPRDLEAYILLAEAYR 547

Query: 337 EMGSIDQAHAKAMLAMKIA 355
           E+   +          ++A
Sbjct: 548 EIQRPELLERALERGSEMA 566


>gi|27469599|gb|AAH42083.1| Transmembrane and tetratricopeptide repeat containing 1 [Homo
           sapiens]
          Length = 774

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 382 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 438

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 439 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 498

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 499 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 558

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 559 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 614

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 615 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 673

Query: 389 MPDP 392
             DP
Sbjct: 674 PKDP 677



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 94/282 (33%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 515 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 572

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 573 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 630

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 631 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 684

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                     +L       ++N +  ++ + 
Sbjct: 685 FTKGNQLREQNLLDKAFESY-------------------RLA-----VQLNPDQAQAWMN 720

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 721 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 762


>gi|188575020|ref|YP_001911949.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188519472|gb|ACD57417.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 418

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 113/363 (31%), Gaps = 29/363 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56
           M  ++     ++L +     +SH       +V ++ G   YR +    L +L   +    
Sbjct: 1   MRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLW 60

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           LL+ +             +  K    KG   L  GL +        A ++    S+    
Sbjct: 61  LLWTLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEV 113

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYF----ESCRIGD 169
               L     V++A A      A    + + +   T          L      E+    D
Sbjct: 114 SGIALAS--AVRVADARGDEAAATALAQQLAERDPTAYALLQGERHLARQRPVEAINALD 171

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +AQ    + L +       T A+ Q     + + +      Q       ++   A L 
Sbjct: 172 SANAQPLPARGLLLR------THALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLA 225

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
               L+ +D   +   +    ++L+ C   + A    A  L   +    A   LE+    
Sbjct: 226 EQTLLQASDANALAERWEALPKALRTCPAVVGAYAQRAAVLHWDD---AAVHSLEQALDA 282

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                +  +Y  L  E    +   A R      +S   L+ ++++A       QA     
Sbjct: 283 QWDESLVRLYGVLPLEKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLH 342

Query: 350 LAM 352
            A+
Sbjct: 343 RAI 345


>gi|126208481|ref|YP_001053706.1| HemY-like protein [Actinobacillus pleuropneumoniae L20]
 gi|126097273|gb|ABN74101.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
          Length = 416

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   +     +S     V I    ++   S  +++      +     +  
Sbjct: 1   MFRVLFLMLLLLASLIFGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +   F       ++    R + K  +    GLM ++  +   A K+ S  ++     +E 
Sbjct: 61  IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117

Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           ++ L++  + A        A++                  L   +   G  N A   A  
Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160

Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            + +     P A    +++++        +  +       K++K +N    IL
Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210


>gi|188996284|ref|YP_001930535.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931351|gb|ACD65981.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 557

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 96/266 (36%), Gaps = 22/266 (8%)

Query: 103 ARKMHSYVSQQHTFHNE--YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           A+K   Y+ +      +   +  LL  +I      Y+ A E  + +L+       A+  L
Sbjct: 180 AQKAEEYLKKSLQIDKKYKPVWQLL-GEIYRQSGNYDKAIEIYKNILKDDPNNLEALNRL 238

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           +       D N+A     K + ++P            Y+   + +  +  L +  +   +
Sbjct: 239 FQIYVDKDDFNNAAETIDKIIRLNPKDNDAILKKFLLYIKYGKSNEILQDLKKSSQENPD 298

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
               +   ++  + E  +  D   +     E  K   ++           ++  +  KA 
Sbjct: 299 NPFLK--FMLGMAYETLE--DYQNAKAIYEELYKQQPDNQELIDRLVSVYLNLKEYDKAL 354

Query: 281 VILEKIWKVNPHPEIANIYTHLLS----ENTVGKLKRALRLE----EINKESVESLVIVS 332
            IL K++  NP       Y  LLS    E+  G +KRAL L      I  +      I +
Sbjct: 355 EILNKLYVQNP-----KDYKILLSMADIEDKKGNIKRALELVKEAESIAPDDPTVHFIKA 409

Query: 333 KIALE-MGSIDQAHAKAMLAMKIAPR 357
            I L+ +G+  +A      ++++ P 
Sbjct: 410 -IYLDKLGNWQEAEKSLYKSLELRPD 434


>gi|254490577|ref|ZP_05103763.1| tetratricopeptide repeat domain protein [Methylophaga thiooxidans
           DMS010]
 gi|224464321|gb|EEF80584.1| tetratricopeptide repeat domain protein [Methylophaga thiooxydans
           DMS010]
          Length = 393

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 8/171 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIP------ATREFAVYSLYFESCRIGDLNSAQR 175
            +L    +     + + A    + ++  P       T+      L  +    G L+ A++
Sbjct: 71  THLALANLFRRRGETDRAIRIHQNLIARPTLSSPQRTQALVELGL--DYMNAGVLDRAEQ 128

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              + L  SP      + +++ Y   K+W +AI    +   + K               E
Sbjct: 129 LFLELLQQSPSPDEAPKQLLRIYQQEKKWQQAIDMAKRITPDKKTNTNALIAQFYCELAE 188

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                D   + +    + +  +N + AS+   K LI   + RKA   L+K+
Sbjct: 189 PLANKDHHQALNLLRSAQQYDNNCVRASLLEGKILIQIRQYRKAMRALQKV 239


>gi|167627541|ref|YP_001678041.1| hypothetical protein Fphi_1315 [Francisella philomiragia subsp.
          philomiragia ATCC 25017]
 gi|167597542|gb|ABZ87540.1| conserved hypothetical membrane protein [Francisella philomiragia
          subsp. philomiragia ATCC 25017]
          Length = 385

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 31/76 (40%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+R+ +   V+ L     I  +     + +   ++  + +    + +++  LF  +  F 
Sbjct: 1  MIRIFKLIIVVVLATLIGIWATKNHGYIMLVMADKAIKVNLVAFVFVVFILLFVLVFGFR 60

Query: 61 VSRFFLSCPAMLFHML 76
          V +     P +LF+  
Sbjct: 61 VIKLSFQLPYLLFNWF 76


>gi|204928563|ref|ZP_03219762.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204321996|gb|EDZ07194.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 1172

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 82  DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109
           D  ++A   G+ ++ A                                     AR +  +
Sbjct: 282 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 341

Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155
                   +       E L+      LL  Q   AL       A    +    +  T  +
Sbjct: 342 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 401

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213
           AV  L   +    D  +A+RY  + L +          +   Y        A  I  L+ 
Sbjct: 402 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 461

Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++ + +          L  ++     +G    +       L L   S+  +   ++ L 
Sbjct: 462 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 521

Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326
              +  +A+  +  + +  P+ PE    Y   LS +   +  L     L   + N    E
Sbjct: 522 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 581

Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               +    V + A  +    +      L  +  P   I L LA 
Sbjct: 582 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIELTLAD 626


>gi|297691491|ref|XP_002823118.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           isoform 2 [Pongo abelii]
          Length = 882

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 723 LAQVLAMMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781

Query: 389 MPDP 392
             DP
Sbjct: 782 PKDP 785



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAMMGQTKEAEK- 738

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870


>gi|297691489|ref|XP_002823117.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           isoform 1 [Pongo abelii]
          Length = 944

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 552 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 608

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 609 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 668

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 669 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 728

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 729 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 784

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 785 LAQVLAMMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 843

Query: 389 MPDP 392
             DP
Sbjct: 844 PKDP 847



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 685 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 742

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 743 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAMMGQTKEAEK- 800

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 801 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 854

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 855 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 890

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 891 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 932


>gi|289192835|ref|YP_003458776.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288939285|gb|ADC70040.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 336

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 13/182 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L   +   A E  ++ L+       A++ L      + D  +A +Y  K L+++PD  
Sbjct: 141 ALLKLNKPKKAMEYFKIALEKDKNNYKALFGLGEAYYNLNDEENAIKYFEKVLELNPDDK 200

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              E +   Y   +++ RAI +  +      E   +   L++  +    +      +   
Sbjct: 201 EALEYLGDIY-YEEDYERAINYYKKAL----ELKSDDINLILKIAYSYMELKKYKEALKY 255

Query: 249 AIESLKLCDN---SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYT 300
             ++LKL  +            +  I   +  KA    EK+ ++NP+ +     IA  Y 
Sbjct: 256 FKKALKLNPDVFKLEEIFEFMGRIYIYLGEDEKAMEYFEKLKEINPYHDEIYEIIALTYE 315

Query: 301 HL 302
            +
Sbjct: 316 EV 317


>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
 gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 532

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 91/280 (32%), Gaps = 11/280 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L+  M +Y        N+   +         + + + A    +  LQI      A  +
Sbjct: 248 GKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQIDPNYVNAHCN 307

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G L+ A     +AL + P+       +        + S AI    +  +   
Sbjct: 308 LGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQIDP 367

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   + ++L    +G +  +      +L++  N   A      +L  Q K  +A
Sbjct: 368 NY--VNAHCNLGKALHT--QGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEA 423

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
               ++  +++P     H  +               +    R   I+    ++   +   
Sbjct: 424 IAAYQRALRLDPNDADTHCNLGIALHD--QGKLSEAIAAYQRALLIDPNDADAHCNLGIA 481

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
               G +++A A+  +A+++ P   +     +I +   + 
Sbjct: 482 LKGQGKLEEAIAELEIAVRLNPNNTVIRNNLEIYRNEKNE 521



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 11/229 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + + + A    +  LQI      A  +L       G L+ A     +AL + P+      
Sbjct: 213 QGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHC 272

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        + S AI    +  +    +    A   + ++L    +G +  +      +
Sbjct: 273 NLGIALHDQGKLSEAIAAYQKALQIDPNY--VNAHCNLGKALHT--QGKLSEAMAAYQRA 328

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307
           L++  N   A      +L  Q K  +A    +K  +++P     H  +            
Sbjct: 329 LRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALH--TQGKL 386

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +    R   ++     +   +       G + +A A    A+++ P
Sbjct: 387 SEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQRALRLDP 435


>gi|26989357|ref|NP_744782.1| cellulose synthase subunit BcsC [Pseudomonas putida KT2440]
 gi|24984215|gb|AAN68246.1|AE016458_11 cellulose synthase operon C protein, putative [Pseudomonas putida
           KT2440]
          Length = 1172

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 104/310 (33%), Gaps = 45/310 (14%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             L+    ++     Y  L    +S+A  ++  A + +  V +    +   +  L+ V  
Sbjct: 371 RALYQQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVRRMAPDNESAVRGLMRVYQ 430

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---------ESCRIGDLNSAQRYATKA 180
           A +  +   A   L+ +      +  ++              E+ +  D ++A     +A
Sbjct: 431 AQSPGK---AQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEALQREDWSTASHVLGQA 487

Query: 181 LDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             ++PD PW+   +   ++      E   A   L Q +           + L +   +  
Sbjct: 488 SALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQPRDPATRYANGLFLESSDRDAL 547

Query: 238 DKGDMIASYHDAIESLKLCDNSIMAS--------------ICAAKSLISQNKKRKAEVIL 283
                      A+ESL+    +  ++              + +A+ L +Q +  +A  +L
Sbjct: 548 -----------ALESLRAVPQATWSADMHALEQRVQRRMTLASAQQLQAQGRSAEATALL 596

Query: 284 EKIW-KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           E    +    P+   +   +     E+   +      L  +     ++ + V + A+  G
Sbjct: 597 EAGLARGEGSPDDLMLLADWAAARGEHGKARSYYQRVLV-VQPGRPDARLGVMESAVAEG 655

Query: 340 SIDQAHAKAM 349
           ++ QA     
Sbjct: 656 NLQQARHMLG 665


>gi|326430659|gb|EGD76229.1| PRP6 pre-mRNA processing factor 6 [Salpingoeca sp. ATCC 50818]
          Length = 926

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 30/299 (10%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCR 166
                      ++L+  + A        A          +         AV         
Sbjct: 585 KAVKYCPQAETLWLMGAKSAWLGGNVPAARNILLHAFTAIPNNEDIWLAAV----KLESE 640

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW-----SRAITFLNQKKKNAKEW 221
             +   A+    +A            A V       EW       A   L    K     
Sbjct: 641 NNEHQRARGLLERARR------EAGTARVWMKSARLEWVLGNLDAASEMLADAVKLHPTA 694

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            +    L + R   +  +  +  +     + +K C +SI   I +A+  ++  +  +A  
Sbjct: 695 PK----LWMMRGQISEQQDKVEDARQFYAQGVKNCPDSIPLWILSARLELAAGQATRARA 750

Query: 282 ILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           ILE+    NPH PE+      +  +    ++  A+ + +  ++   S ++ S+ A+ M  
Sbjct: 751 ILERGRLKNPHCPELWLESVDIERQLGQPEVATAI-MAKALQDCPNSGLLWSE-AIFMEP 808

Query: 341 IDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD--PLWIS 396
             Q   K++ A+K       + L +A++  ++     K   W    +   PD    W +
Sbjct: 809 RPQRKTKSLDALKRCENDARVLLAVAKLLLSDRR-ITKARRWFNRTVKLDPDYGDAWAA 866



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 6/163 (3%)

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296
           + G   +      +++K C  +    +  AKS         A  IL   +   P + +I 
Sbjct: 572 EHGTRESLDEHLRKAVKYCPQAETLWLMGAKSAWLGGNVPAARNILLHAFTAIPNNEDIW 631

Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                L SEN    + +  L        +    +  +++   +G++D A      A+K+ 
Sbjct: 632 LAAVKLESENNEHQRARGLLERARREAGTARVWMKSARLEWVLGNLDAASEMLADAVKLH 691

Query: 356 PRKEIFLLL-AQIEQANSHNTDKILYWTQSALHAMPD--PLWI 395
           P      ++  QI +      +    +    +   PD  PLWI
Sbjct: 692 PTAPKLWMMRGQISEQQDK-VEDARQFYAQGVKNCPDSIPLWI 733


>gi|167645819|ref|YP_001683482.1| sulfotransferase [Caulobacter sp. K31]
 gi|167348249|gb|ABZ70984.1| sulfotransferase [Caulobacter sp. K31]
          Length = 725

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 92/310 (29%), Gaps = 42/310 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GLM+ A  N+ LA     +         +YL  L   ++     +   A +     + + 
Sbjct: 51  GLMAHAYGNLDLAIDHLRHACLAPRAPAQYLSNL--AEMCRQAGRLAEAEQAARRSVSMD 108

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           ++      +L       G L  +     + + + PD       +           +A   
Sbjct: 109 SSLVAGWNNLGIVLQEAGKLEESLTCLERVVALQPDYAEAHNNLGNTLKRLGRLDQARAR 168

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             Q  K A  +    A  L   S    D G    +   A  ++        A I AA   
Sbjct: 169 YEQALKLAPAY----AEALSNLSNLLNDLGLSDEALASARRAIDANPRLSDAYINAAAVE 224

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           +++++  +        W      +   +Y  L +     +     RL  +++  VE+   
Sbjct: 225 VARDRYDEGLR-----WV-----DALLVYAPLHAGALGVRATILRRLGRLDEALVEARRA 274

Query: 331 VSKI-----AL---------------EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
           ++       AL                + + D+A      A + A      LL+      
Sbjct: 275 LATAPDNGEALNTLGEVLQAQDKMDEALAAYDRAAQSLGFAPEKALVNRAILLM------ 328

Query: 371 NSHNTDKILY 380
              +T+    
Sbjct: 329 ERGDTEAAKA 338



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 80/221 (36%), Gaps = 16/221 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G ++ A+R   + L + P        ++     A      +       ++A    R  A
Sbjct: 23  AGQVDQAERLCQQVLALWPGQSDALH-LMGLMAHA---YGNLDLAIDHLRHACLAPRAPA 78

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             L   +      G +  +   A  S+ +  + +         L    K  ++   LE++
Sbjct: 79  QYLSNLAEMCRQAGRLAEAEQAARRSVSMDSSLVAGWNNLGIVLQEAGKLEESLTCLERV 138

Query: 287 WKVNPHPEIANIYTHLLSENTVGKL-------KRALRLEEINKESVESLVIVSKIALEMG 339
             +   P+ A  + +L   NT+ +L        R  +  ++     E+L  +S +  ++G
Sbjct: 139 VALQ--PDYAEAHNNL--GNTLKRLGRLDQARARYEQALKLAPAYAEALSNLSNLLNDLG 194

Query: 340 SIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKIL 379
             D+A A A  A+   PR    ++  A +E A     + + 
Sbjct: 195 LSDEALASARRAIDANPRLSDAYINAAAVEVARDRYDEGLR 235



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 32/87 (36%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+G L+ A   A +AL  +PD       + +      +   A+   ++  ++       
Sbjct: 259 RRLGRLDEALVEARRALATAPDNGEALNTLGEVLQAQDKMDEALAAYDRAAQSLGFAPEK 318

Query: 225 RAILLIARSLENADKGDMIASYHDAIE 251
             +      +E  D     A++ D +E
Sbjct: 319 ALVNRAILLMERGDTEAAKAAFDDVLE 345


>gi|220932028|ref|YP_002508936.1| TPR repeat-containing protein [Halothermothrix orenii H 168]
 gi|219993338|gb|ACL69941.1| TPR repeat-containing protein [Halothermothrix orenii H 168]
          Length = 394

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 134 RQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            + N+A    E    M +    R     +L        D   A +   ++  I+PD   +
Sbjct: 188 GKVNLAINTYEKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKINPDFVAI 247

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           +  + + Y L+  +  A     +      +  +            +    +   + +   
Sbjct: 248 STKLGEAYYLSGNYELAREEFEKVVSINDKSYK----AYYYLGKIHEINHNEDKAIYYYK 303

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSE 305
           ++LK       A I      I Q+K   A        + NP +P+    +A  Y  L  E
Sbjct: 304 QALKYNPEYASAYIALGDIYIRQDKPYLAISHYSTAIEKNPNYPDSHFHLAVTYYILEME 363

Query: 306 NTVGKLKRALRLEEINKESV 325
           +    +    +   +N    
Sbjct: 364 DAA--IAELKKTLHLNPNHR 381


>gi|289615482|emb|CBI57723.1| unnamed protein product [Sordaria macrospora]
          Length = 969

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 88/264 (33%), Gaps = 35/264 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E      ++ A+    +A   +PD+  +  A V+         +A   L   ++NA 
Sbjct: 644 LAREKAADAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARELLKTARQNAP 703

Query: 220 E---------WNRNR-----AILLIARSLEN---------------ADKGDMIASYHDAI 250
                     + R +     A+ L+ ++L                  D      +     
Sbjct: 704 TDRVWMRSVAFERQQGDNEAALDLVQQALPLFPAKPKLWMIKGQIYEDLSQPGPAREAYS 763

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309
             ++   +SI   +  ++         KA  +L++  +  P  PE+      +  E   G
Sbjct: 764 TGVRAVPSSIPLWLLYSRLEEKAGNVVKARSVLDRARQAVPKSPELWTELIRV--ERRAG 821

Query: 310 KLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-I 367
            L +A  L     +   +S ++ ++  L +    Q  +    A+K      I L+ A  I
Sbjct: 822 NLNQAKSLMAQALQQMPKSGLLWAERILNLEPRTQRKSLLAEAVKKVEDDPILLVTAARI 881

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
             A     D+   W + AL    D
Sbjct: 882 LWAERK-LDRAQNWFEKALLLDRD 904



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 72/232 (31%), Gaps = 8/232 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             S       +A+     A+ + P++  +  A +               L +  +    +
Sbjct: 578 RASINRDKFATARAIYAYAIRVFPNSKSLYTAAIDLERNHGSKEDLWHALEKAVEACPHY 637

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                +  +  + E A    +  +      + K   +S    + A K         KA  
Sbjct: 638 E----VFWLMLAREKAADAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARE 693

Query: 282 ILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +L+   +  P   +   ++       +    L    +   +     +  +I  +I  ++ 
Sbjct: 694 LLKTARQNAPTDRVWMRSVAFERQQGDNEAALDLVQQALPLFPAKPKLWMIKGQIYEDLS 753

Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               A       ++  P    ++LL +++E+  + N  K       A  A+P
Sbjct: 754 QPGPAREAYSTGVRAVPSSIPLWLLYSRLEEK-AGNVVKARSVLDRARQAVP 804


>gi|17552198|ref|NP_498398.1| LEThal family member (let-716) [Caenorhabditis elegans]
 gi|14573809|gb|AAB47599.3| Hypothetical protein C16A3.3 [Caenorhabditis elegans]
          Length = 1743

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 19/204 (9%)

Query: 161  YFESCRIGDLNSAQRYATKAL-DISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKK 215
                    DL +A++ A +AL  I+P        +  A +   V   + +       +  
Sbjct: 1493 MSHFIEKSDLAAARKTAEEALGAINPTESDELLKIWTAYLNMEVAYGDAATVQKVFERAC 1552

Query: 216  KNAKEWNRNRAILLIARSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            KNA  +  ++ +  I +  E NA+   ++        + +L           A+ L++QN
Sbjct: 1553 KNANAYTVHKTLSKIYQKFEKNAEATQILEQMVKKFRANQLE-----VWTLLAEHLMTQN 1607

Query: 275  KKRKAEVILEKIWKVNP----HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVES 327
             ++ A  +L +  K  P    H ++ + +  L     +   G+      L   + +  + 
Sbjct: 1608 DQKAARELLPRALKSAPKAQQHVQLISKFAQLEFKHGDAERGR-TLLEGLVTAHPKKTDL 1666

Query: 328  LVIVSKIALEMGSIDQAHAKAMLA 351
             ++ ++  L+   I+ A      A
Sbjct: 1667 WLVYAEAVLKHLGIEHARKVLERA 1690


>gi|120601596|ref|YP_965996.1| diguanylate cyclase [Desulfovibrio vulgaris DP4]
 gi|120561825|gb|ABM27569.1| diguanylate cyclase [Desulfovibrio vulgaris DP4]
          Length = 792

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 21/194 (10%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            ++  A    E  LQ       A+Y+L      +G+   A+++  K L  +P   +    
Sbjct: 606 GRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKHYRKCLKYAPGHVFALVR 665

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + Q     K +++A  + N+  +          ++    +  +  +G    +     ++L
Sbjct: 666 LGQLAEGEKRYAQARQYFNKAARAGDSG----GLVHRNLARLSMRQGRPDEAREHLHDAL 721

Query: 254 KLCDNSIMASICAAKSLISQNK--------KRKAEVI---LEKIWKVNPHPEIANIYTHL 302
                  +A    A+  +   +         R++  +   L++ W      E+A      
Sbjct: 722 LRNPQDAVALQLMARLYLDGGEDPAMAEALSRQSVALRPDLKQGWL-----ELARA-LDA 775

Query: 303 LSENTVGKLKRALR 316
                  +  R   
Sbjct: 776 RGHVAEAREARLRA 789



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 5/155 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                ARK +    +    H   LV L   Q+A  E++Y  A +      +   +     
Sbjct: 640 GETAEARKHYRKCLKYAPGHVFALVRL--GQLAEGEKRYAQARQYFNKAARAGDSGGLVH 697

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L   S R G  + A+ +   AL  +P      + + + Y+   E   A+     ++  
Sbjct: 698 RNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYLDGGE-DPAMAEALSRQSV 756

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A   +  +  L +AR+L+   +G +  +    + +
Sbjct: 757 ALRPDLKQGWLELARALD--ARGHVAEAREARLRA 789



 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 41/226 (18%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A      AL           ++            A  +  Q  +          +
Sbjct: 572 GDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKP----GDPM 627

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L          G+   +     + LK     + A +   +   ++ +KR A+       
Sbjct: 628 ALYNLGTVCQSLGETAEARKHYRKCLKYAPGHVFALVRLGQL--AEGEKRYAQ------- 678

Query: 288 KVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                   A  Y +    + ++ G + R                 ++++++  G  D+A 
Sbjct: 679 --------ARQYFNKAARAGDSGGLVHR----------------NLARLSMRQGRPDEAR 714

Query: 346 AKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMP 390
                A+   P+  + L L+A++   +      +         A+ 
Sbjct: 715 EHLHDALLRNPQDAVALQLMARL-YLDGGEDPAMAEALSRQSVALR 759


>gi|37526324|ref|NP_929668.1| hypothetical protein plu2428 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785755|emb|CAE14802.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 389

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 104/320 (32%), Gaps = 57/320 (17%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +++        R  A   L  +    G  + A+    + ++       
Sbjct: 83  GEVERAIRIHQSLMESASLTFDQRLLATQQLGRDYMSAGLYDRAENMFAQLVNEKDFQEN 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIAS--- 245
             ++++  Y    +W +AI    +  K+ K   R + A      +L+     D+  +   
Sbjct: 143 AFQSLLTIYQSTSDWKKAIDIAEKLVKSGKHDLREKIAHFYCELALQEMSGDDLDEAIGY 202

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIY 299
            + A+++ K C      SI   +  +++ +  KA   L+ + + +        P +   Y
Sbjct: 203 LNKAVQADKNCAR---VSIMLGRLFMARQEYNKAADALKSVLEQDKQLVSEVLPILQECY 259

Query: 300 THLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            H    +     LKR +  +        + ++++ I  +    + A       ++  P  
Sbjct: 260 QHQNQIDEWENFLKRCVEEDCGAT----AELLLADIIEQQKGHEVAQTYINHRLERHPTM 315

Query: 359 EI-FLLL----AQIEQANSHNTDKILYWTQSALHAM---PD---------PLWISD-DGY 400
            + + L+    A+ E+               A  ++    D         P +     G+
Sbjct: 316 RLFYRLMDYHLAEAEEG-------------RAKESIILLRDMVGEQIRTKPNYRCHKCGF 362

Query: 401 LSSV--WLPLSPISKTLCYF 418
            S    W    P  ++    
Sbjct: 363 TSHSLYWH--CPSCRSWDSI 380


>gi|299133582|ref|ZP_07026776.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
 gi|298591418|gb|EFI51619.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
          Length = 718

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 14/194 (7%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            RA T     ++   E   +R  L    +     +G +  +  +   +L+L      A+I
Sbjct: 513 DRAATEFIAAQRANAERPESRTTLGNFLA----QRGQLQEAEAEYRAALRLSPQYATAAI 568

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLE 318
             A     + +  + E++L      +P     H  +      L   E  + +L +A  LE
Sbjct: 569 NLADLYRQRGRDSEGEIVLHAALVSSPRDAALHQALGLTLIRLKRPEGALTELHQATELE 628

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDK 377
                      + +      G  ++A      A+   P+   I   L    +        
Sbjct: 629 PYQPRYA---YVYAVALHSSGQYEEAMTVLKNALHNHPKDREILQALVSFSRGAGDAAAA 685

Query: 378 ILYWTQSALHAMPD 391
           + Y  + A    PD
Sbjct: 686 LSYAKKLATVGPPD 699


>gi|302811916|ref|XP_002987646.1| hypothetical protein SELMODRAFT_126445 [Selaginella moellendorffii]
 gi|300144538|gb|EFJ11221.1| hypothetical protein SELMODRAFT_126445 [Selaginella moellendorffii]
          Length = 938

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 93/303 (30%), Gaps = 46/303 (15%)

Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            AL E+ +  + E ++ +L+      P      +     E    GD++ A+   T A   
Sbjct: 565 AALLEKGH-GSREAVDSLLERAVGCCPKAEVLWLLG-AKEKWLAGDIDGARAILTAAYVA 622

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P++  +  A  +    ++E  RA   L + ++      R    + +  ++   + G + 
Sbjct: 623 IPESEEIWLAAFKLEFESREPERARILLAKVRERGGCSER----VWMKSAMVERELGKVA 678

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHL 302
                  E LK         +   +          A  + E+   + +P           
Sbjct: 679 EERRLLEEGLKRFPGFHKLWLMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAA 738

Query: 303 LSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             E   G++ +A  L        KE  E  +   +     G   +A A    A++   R 
Sbjct: 739 ELEEKGGRIAKARALLTTARLKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQECRRS 798

Query: 359 EIFLL----LA-----------QIEQANSHN---------------TDKILYWTQSALHA 388
            I       +A            ++ +                    DK   W + A+ A
Sbjct: 799 GILWAASAEMAPRAQRKARSFDAVKNSEQDPFVVAVVGKFFWQDRKVDKARSWIKRAVAA 858

Query: 389 MPD 391
            PD
Sbjct: 859 APD 861



 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 17/218 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L+  Q+         A    E  L+   PAT      +      + G +  A+   T A 
Sbjct: 699 LMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAAELEEKGGRIAKARALLTTAR 758

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
               + P +  A ++    A +W  A   + +  +        R+ +L A S E A +  
Sbjct: 759 LKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQEC-----RRSGILWAASAEMAPRAQ 813

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
             A   DA+++ +     ++A +   K      K  KA   +++   V   P+I + +  
Sbjct: 814 RKARSFDAVKNSEQDP-FVVAVV--GKFFWQDRKVDKARSWIKRA--VAAAPDIGDFWAV 868

Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKI 334
           L        +T    +   R +    +  E  + VSK 
Sbjct: 869 LYRFEQGHGSTEAIEEVVERCKAAEPKHGEQWIRVSKA 906


>gi|261343662|ref|ZP_05971307.1| tetratricopeptide repeat protein [Providencia rustigianii DSM 4541]
 gi|282568045|gb|EFB73580.1| tetratricopeptide repeat protein [Providencia rustigianii DSM 4541]
          Length = 390

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 103/337 (30%), Gaps = 55/337 (16%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   +F    L      +  +    Y+ A    + +         
Sbjct: 84  GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMTAGVYDRAENMFQQLTDEVD---- 139

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                + +S                           ++++  Y L  +W +AI    +  
Sbjct: 140 -----FKQS-------------------------ALQSLLTIYQLTSDWGKAIETATKLV 169

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K   E  R + A      + +     D+  +     +  ++  N    SI   +  I Q 
Sbjct: 170 KLGAEELREQIAHFYCELATQELASDDIDGALSLLNKGEQVDKNCARISIMKGRIFIEQA 229

Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              KA   L++++           P +   Y H    +         +  E N  ++ + 
Sbjct: 230 NYEKAINALKQVYSQDRELVSETLPLLYECYQHTGHSDDWE--AYLRQCVEGNSGAI-AE 286

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL-AQIEQANSHNTDKILYWTQSAL 386
           + ++ I +E  + + A +     ++  P   + + L+   + +A      + L   +  +
Sbjct: 287 LYLADIIVEKQNHEAAVSYINDQIQRHPTMRLFYRLMDYHLAEAEEGRAKESLILLRKMV 346

Query: 387 -HAMP-DPLWIS-DDGYLSSV--WLPLSPISKTLCYF 418
              +   P +     G+ S    W    P  ++    
Sbjct: 347 GEQIRTKPDYRCLKCGFTSRALYWH--CPSCRSWDTI 381


>gi|320182592|gb|EFW57482.1| Cellulose synthase operon protein C [Shigella boydii ATCC 9905]
          Length = 1111

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 306 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 363

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 364 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 423

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 424 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 483

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 484 EQVYAYGLYLSGHNQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 540

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 541 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARTAYQNVLTR-EPTNADAI 594

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 595 LGLTEVDIAAGDKAAARSQLAKLPATDNTSLNTQRRVALAQAQLGDTAAAQQ 646



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 538 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARTAYQNVLTREPTNADAILGL 597

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 598 TEVDIAAGDKAAARSQLAKLPATDNTSLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 657

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 658 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 692



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 211 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 265

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 266 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 325

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 326 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 369


>gi|253995536|ref|YP_003047600.1| HemY domain-containing protein [Methylotenera mobilis JLW8]
 gi|253982215|gb|ACT47073.1| HemY domain protein [Methylotenera mobilis JLW8]
          Length = 140

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 1/127 (0%)

Query: 3   RLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVS 62
           R   + F +  +I    + S+    V I       + S    L +    +F         
Sbjct: 5   RFFWWAFTLLAIIFIVWLASNNQGYVLIIRSPYRIQISFNFFLVVFVLSVFGLHHCLRFL 64

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYL 121
           RF    PA+            G  AL  G+ ++AA +   A        +     + E L
Sbjct: 65  RFLRHLPAIRRSKKEALRLKAGNTALLEGMHALAAGDFESAEASAKLAQELIQNSDLETL 124

Query: 122 VYLLEVQ 128
           +  L  +
Sbjct: 125 IQKLTAE 131


>gi|198434517|ref|XP_002131769.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase
           [Ciona intestinalis]
          Length = 1042

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 101/300 (33%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLV 122
             L H  H          GY  L   L  + A ++  A   +    Q   +       L 
Sbjct: 113 EALDHYRHAVRLKPDFIDGYINLAAAL--VTAGDLEGAVHAYFSALQINPELYCVRSDLG 170

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 171 NLLKA-----LGRLEEAKACYLKAIETQTNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVK 225

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 226 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NHAVVHGNLACVYYEQGLV 281

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  + K   AE    K  ++ P H +  N   +
Sbjct: 282 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGKVGDAEECYNKALRLCPTHADSLNNLAN 341

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E  +  ++ A+ L         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 342 IKREQGL--IEEAIALYSKALEVFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRISPT 399



 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 60/216 (27%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A E     L++  T   ++ +L       G +  A    +KAL++ P+
Sbjct: 306 ANALKEKGKVGDAEECYNKALRLCPTHADSLNNLANIKREQGLIEEAIALYSKALEVFPE 365

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 366 FAAAHSNLASVLQQQGKLQEALLHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAI 421

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A           A        K+   P+  + Y +L    
Sbjct: 422 QCYTRAIQINPAFADAHSNLASVHKDSGSIPAAIQSYRTALKLK--PDFPDAYCNLAHCL 479

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 480 QIICDWSDYDERMKKLVSIVSDQLSKNRLPSVHPHH 515


>gi|148252588|ref|YP_001237173.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146404761|gb|ABQ33267.1| putative TPR repeat containing protein [Bradyrhizobium sp. BTAi1]
          Length = 800

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 91/273 (33%), Gaps = 17/273 (6%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQI-- 149
           +  A    L   + S         +       L+     L   +   A   L  ML+   
Sbjct: 523 AALAGQNKLEASVASLEEAHAAAPDAVRPATLLVAA--YLRSGRPEKAEALLTDMLKRRP 580

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             +    +      +   G  + A+    + +   P       ++ + Y   K ++ A +
Sbjct: 581 DESALLLLMGQTQSAK--GRTDEAKTIFKRVITQQPKNEAAYRSLSELYANEKSFNEAAS 638

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +  K   +    R    ++++  +  +GD   +       LK   N+++A    A  
Sbjct: 639 ILKEGLKENPDNLNLR----LSQASLSLARGDNDGAIAAYEAVLKDDPNALLAVNNLASL 694

Query: 270 LISQNKKR----KAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
           L+ +   +    +A  + E++   + P  +    +  +   NT   +K    +       
Sbjct: 695 LLDERTDKASLDRAVQLAERLKSSDLPQFQDTYAWAQVKRGNTAEAVKLLESVIARVPSF 754

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +   +++  L MG   QA+ +  LA+   P 
Sbjct: 755 SAARYHLAQGYLAMGRAAQANEQLKLALGAEPD 787



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 78/200 (39%), Gaps = 11/200 (5%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           DL  A+    +++  +P +  + +A+ Q  +  K W+ A+   +  +           + 
Sbjct: 462 DLAQAETVLLESIARNPRSLPLLQALAQVRIARKNWTGALAVADVIRGAEDSAGIADQV- 520

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKIW 287
              R+   A +  + AS     E+     +++  A++  A + +   +  KAE +L  + 
Sbjct: 521 ---RAAALAGQNKLEASVASLEEAHAAAPDAVRPATLLVA-AYLRSGRPEKAEALLTDML 576

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQ 343
           K  P  E A +     +++  G+   A  + +       ++  +   +S++     S ++
Sbjct: 577 KRRPD-ESALLLLMGQTQSAKGRTDEAKTIFKRVITQQPKNEAAYRSLSELYANEKSFNE 635

Query: 344 AHAKAMLAMKIAPRKEIFLL 363
           A +     +K  P      L
Sbjct: 636 AASILKEGLKENPDNLNLRL 655



 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 104/313 (33%), Gaps = 26/313 (8%)

Query: 81  YDKG---YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
            DKG   Y AL   ++   A ++  A +      +    + + L+ L   Q+A      +
Sbjct: 137 EDKGRADYHALRAAVL-FKAGDLAGAVRDAEQTIRLEPGNFDALMVLASAQVAR--GDVD 193

Query: 138 IAHEKLEMM--LQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            A + +  +       TR  A+  ++Y     +    +  +       +    P   E +
Sbjct: 194 AALQMISQLPSASQDDTRVLALKVAIYGRKRDLVQTEATLK------KLVDSKPEFREQL 247

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           V  YV  +    A   L     ++         L+   +          A+       +K
Sbjct: 248 VNLYVEQRRLDEAEKELRTAAADSSADVATNLRLVRFLASFR----SPAAAQEQLESRIK 303

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEIAN----IYTHLLSENTVG 309
              +     +  A     Q    +A  +LE + K   P   +A        ++   NT  
Sbjct: 304 AGGDVFPYQMSLADLDYLQGNLDQATSLLESVVKTAAPDRALAAKNRLAQVYIRRGNTEM 363

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQI 367
             K    + E ++ +  +L + + + L+ G +D A A    A+   P+    LL+  A  
Sbjct: 364 ANKLVSEVLEKDRRNTGALKLRAAMRLDAGQVDGAIADLREALNNEPKSPELLLMFGAAF 423

Query: 368 EQANSHNTDKILY 380
           E++         Y
Sbjct: 424 ERSGKAELAARQY 436


>gi|320105829|ref|YP_004181419.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319924350|gb|ADV81425.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
           saanensis SP1PR4]
          Length = 764

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/312 (17%), Positives = 103/312 (33%), Gaps = 20/312 (6%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146
           L TG +++A      A      V      + +    L    +A+ +     A  ++ + +
Sbjct: 108 LDTGNLALAGGQPDAAEVQAKAVLAAQPNNADAYAML--ANVAIRKGDTPTALTQIGKAL 165

Query: 147 LQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              P      A Y    ++     L  +Q    KA+ + P        +        + +
Sbjct: 166 AIDPNRAAFHATYG-MLQTLNPATLAQSQGELAKAVQLDPSNAGAHLGLAAILEKKGDVA 224

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A   LN    +A   N    + L A  + + D+    A    A E L     S   S  
Sbjct: 225 GAEQQLNAAV-SADPKNLQARVSLAALYMRSKDQPKAEAVLRKATEDLS---ESTQGSDL 280

Query: 266 AAKSLISQNKKRKAEVILEKIWK--VNPHPE---IANIYTHLL--SENTVGKLKRALRLE 318
                  QN+  +A    E  +      HP    +  +Y H+L          + +  L 
Sbjct: 281 LRSYYAQQNQMDRA----ETAYADLTAKHPGSVPLKLVYAHILVGRGKIAQATEVSKELT 336

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           +   +  + +V+ + + L  G +D+A++    A+K +P      L A +      +    
Sbjct: 337 KSKPKDPQVVVLNAMLMLNAGKVDEANSALQEALKDSPDNPTVRLWAGMTARAKGDIPAA 396

Query: 379 LYWTQSALHAMP 390
               Q  L A P
Sbjct: 397 QQDFQQVLQAEP 408



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/343 (12%), Positives = 92/343 (26%), Gaps = 56/343 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            ++ + A  +  A    +         +   V L     A A+     A +  + +LQ  
Sbjct: 350 AMLMLNAGKVDEAN--SALQEALKDSPDNPTVRLWAGMTARAKGDIPAAQQDFQQVLQAE 407

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATK------------------------------- 179
                A   L   +   GD    ++ A                                 
Sbjct: 408 PANFGAQKGLAEIASSKGDFTLLRQIAESTIARYGNLPDGYLWRGTAEANEHDLDKAAAD 467

Query: 180 ---ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
              AL   P+       + Q  +           L Q   ++         L +  +L+ 
Sbjct: 468 FQMALTKDPNNSAGLFELAQIRIAQHRVDDGRKLLEQAVSSSANAQ----ALHLLTALDM 523

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             K     +     + +     S           +SQ+    A    +K  ++NP    A
Sbjct: 524 QAK-QPDKALARIQQLIGRFPQSGALYDELGAVQLSQHNGAGAIASAQKAMELNPSDAQA 582

Query: 297 -NIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
             IY    +L+ N    + +  +    + +  +   ++  +    G   +A       ++
Sbjct: 583 VKIYTQAQILTGNVGPAIAKWEQWIGAHPKDPQGYAVLGLLEESAGDPTKAMEYYKKTLE 642

Query: 354 IAPRKEIFL-----LLAQIEQANSHNTDKILYWTQSALHAMPD 391
           + P++         L+A  E   + +          A  A   
Sbjct: 643 LQPQQPAASNNLAYLMA--EHGQNLDVA-----LTLAQTARRG 678



 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 62/210 (29%), Gaps = 13/210 (6%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           ALY  L ++       A  + S         ++     +  Q  +       A  K E  
Sbjct: 547 ALYDELGAVQLSQHNGAGAIASAQKAMELNPSDAQAVKIYTQAQILTGNVGPAIAKWEQW 606

Query: 147 L----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           +    + P         L  E    GD   A  Y  K L++ P  P  +  +        
Sbjct: 607 IGAHPKDPQGYAVL--GLLEE--SAGDPTKAMEYYKKTLELQPQQPAASNNLAYLMAEHG 662

Query: 203 E-WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           +    A+T     ++           L          KG   ++     ++ KL  N+  
Sbjct: 663 QNLDVALTLAQTARRGLPNSASTDDTL----GWVYFRKGQYDSARSYLEDAAKLDPNNAS 718

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                  +    N+K  A+V L K   + P
Sbjct: 719 IHYHLGMTYSRLNRKPDAQVHLNKAITLAP 748



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 13/256 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             LA+             +    +L    I   +     A ++L   +        A  S
Sbjct: 187 ATLAQSQGELAKAVQLDPSNAGAHLGLAAILEKKGDVAGAEQQLNAAVSADPKNLQARVS 246

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKK 216
           L     R  D   A+    KA +   ++   ++ +   Y    +  RA T    L  K  
Sbjct: 247 LAALYMRSKDQPKAEAVLRKATEDLSESTQGSDLLRSYYAQQNQMDRAETAYADLTAKHP 306

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +       A +L+ R       G +  +   + E  K         +  A  +++  K 
Sbjct: 307 GSVPLKLVYAHILVGR-------GKIAQATEVSKELTKSKPKDPQVVVLNAMLMLNAGKV 359

Query: 277 RKAEVILEKIWK---VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            +A   L++  K    NP   +    T     +     +   ++ +    +  +   +++
Sbjct: 360 DEANSALQEALKDSPDNPTVRLWAGMTARAKGDIPAAQQDFQQVLQAEPANFGAQKGLAE 419

Query: 334 IALEMGSIDQAHAKAM 349
           IA   G        A 
Sbjct: 420 IASSKGDFTLLRQIAE 435


>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
 gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 632

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 79/233 (33%), Gaps = 11/233 (4%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A  E  +  A      +++I      A   L       G L  A      A++I+P+  
Sbjct: 35  AAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINPNYA 94

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            V   +        +   AI   N   +    +    A +        +++G +  +   
Sbjct: 95  EVYNNLGVALYYQGKLEEAIAAYNTAIEINPNY----AEVYSNLGFALSNQGKLEEAIAA 150

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303
             +++++  N   A I    +L +Q K  +A     K  ++N  P  A +Y++L      
Sbjct: 151 YNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEIN--PNYAEVYSNLGFALYN 208

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  +       EIN     +   +       G +++A A    A++I P
Sbjct: 209 QGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINP 261


>gi|332839885|ref|XP_003313873.1| PREDICTED: transmembrane and TPR repeat-containing protein 1
           isoform 1 [Pan troglodytes]
          Length = 774

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 382 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 438

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 439 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 498

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 499 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 558

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 559 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 614

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 615 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 673

Query: 389 MPDP 392
             DP
Sbjct: 674 PKDP 677



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 515 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 572

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 573 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 630

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 631 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 684

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 685 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 720

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 721 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 762


>gi|294649575|ref|ZP_06726995.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824562|gb|EFF83345.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 518

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 2/167 (1%)

Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R+ +  +  R+L+   +  D+ A+   A   ++     + A    +   +  ++   A  
Sbjct: 51  RSNSTTIKQRALDIALEYDDLQAALDIATHWVEQEPKDVPALFYLSHIALKTHEYELAAK 110

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340
            L+KI  ++P  ++  I   +  E    +      L     K +   L +++ +  + G 
Sbjct: 111 TLDKILNIDPTADLEQILAGIAPEQAEDREILLNALRASKEKNNPSILALIAGLEAQDGL 170

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +QA      A++   +   F+L+         + +    W   A  
Sbjct: 171 YEQALKNINRALRKRSKSTSFILMKANLLMALKDQEATQKWLARASR 217


>gi|226330227|ref|ZP_03805745.1| hypothetical protein PROPEN_04140 [Proteus penneri ATCC 35198]
 gi|225201022|gb|EEG83376.1| hypothetical protein PROPEN_04140 [Proteus penneri ATCC 35198]
          Length = 389

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/340 (12%), Positives = 106/340 (31%), Gaps = 63/340 (18%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   +F    L      +  +A   Y+ A    + ++     R+ 
Sbjct: 83  GEVERAIRIHQSLMESAALSFDQRLLAVQQLGRDYVAAGVYDRAENMFQQLIDEQEFRQS 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  ++++  Y L  +W +AI    +  
Sbjct: 143 AL----------------------------------QSLLAIYQLTSDWGKAIETAEKLV 168

Query: 216 KNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  + E     +      +L+     ++ ++ +   ++ ++       SI   +  I+++
Sbjct: 169 KLGQHELKEQISHFYCELALQEMSSDNLDSALNLLQKAGQMDPFCARVSIMYGRIYIARD 228

Query: 275 KKRKA----EVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+KA      ++E  K       P +   +     + +     R         +S    
Sbjct: 229 DKQKAIDVLMKVIEQDKEMVSETLPMLFECF-QAQGDTS-----RWEAYLRQCVDSNCGA 282

Query: 329 VIVSKIA--LEMGS-IDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQANSHNTDKILY 380
           +    +A  +E    I+ A       ++  P   + + L+    A+ E+  +  +  +L 
Sbjct: 283 IAELYLADIIEAKEGIEAAQLYINRQLERHPTMRLFYRLMRYHLAEAEEGRAKESLILLR 342

Query: 381 WTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCY 417
           +          P +       +S    W    P  ++   
Sbjct: 343 YMV-GEQIRTKPDYRCHKCGFTSHALYWH--CPSCRSWDT 379


>gi|268317299|ref|YP_003291018.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
 gi|262334833|gb|ACY48630.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 404

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 77/244 (31%), Gaps = 17/244 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 + + A       L++ +T   A   L     R G    A R+A +A+ ++P   
Sbjct: 149 AYEQLARDDSARAAYAQALRLDSTYAEAHAGLSRLLERAGRYEEALRHAEQAMTLAPARL 208

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKN-----AKEWNRNRAILLIAR---SLENADKG 240
                V    V    ++ AI  L    ++        +N  RA++   R         + 
Sbjct: 209 DYRYRVGALLVQLGRFAEAIPLLQTVVQHWPGHDGAAYNLGRALIATGRTEAGQRYLARA 268

Query: 241 DMIASYHD----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           D +    +    A    +L  +   A    A+ L+      +A   L+    + P   +A
Sbjct: 269 DSLQQLTERLLHARRRTELQPDDPDAWSAYARLLMEAGYLDQAYTALQTALTLAPG-NLA 327

Query: 297 ----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                    L   +T G LK    L   +    E    +  +   +G    A       +
Sbjct: 328 LLSNLATLQLAMGDTTGALKGLQLLVRADSSFAEGWFNLGVVYAMLGDTGAAREAWQRTL 387

Query: 353 KIAP 356
           ++ P
Sbjct: 388 RLNP 391


>gi|254283903|ref|ZP_04958871.1| sulfotransferase [gamma proteobacterium NOR51-B]
 gi|219680106|gb|EED36455.1| sulfotransferase [gamma proteobacterium NOR51-B]
          Length = 668

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 35/258 (13%)

Query: 146 MLQIPAT-------REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           M   P         R  A+ +L     R GD + A+      L   P  P          
Sbjct: 1   MTTDPIAAMDSESERLAAIQNL----LRAGDRDKARNAVKAWLSDQPKHPEALYFYAVIQ 56

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               +   A+  L +  K   E +R  + +    R +     G    S      + ++  
Sbjct: 57  RTDGQPDSAMQTLAELLKIQPEHSRAVQELGHCQRQM-----GATALSLKYYQRATRMNA 111

Query: 258 NSIMA---SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
           + I +    + A + L  +N   +    ++ + +  P P +A +       +   + KR 
Sbjct: 112 SLIASWQGQLHALQKLGQRNGLNQIAEQIDYL-RALPPPLLAVM-------DLQARGKRL 163

Query: 315 ------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
                  R  + N   +E + +++ IALEMG++D+A      A KIAP  + + L   Q+
Sbjct: 164 QAEELCKRFMQKNPRHIEGMRLLAGIALEMGALDEAALLLTTAEKIAPANQRVQLDCVQL 223

Query: 368 EQANSHNTDKILYWTQSA 385
            +  +++ +      + A
Sbjct: 224 ARRQNNHDEARRRANKLA 241



 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 93/279 (33%), Gaps = 18/279 (6%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L  +Q  L     + A   ++  L        A+Y         G  +SA +   + L 
Sbjct: 15  RLAAIQNLLRAGDRDKARNAVKAWLSDQPKHPEALYFYAVIQRTDGQPDSAMQTLAELLK 74

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA--RSLENADKG 240
           I P+     + +   +   +  + A++      K  +   R  A L+ +    L    K 
Sbjct: 75  IQPEHSRAVQEL--GHCQRQMGATALS-----LKYYQRATRMNASLIASWQGQLHALQKL 127

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H----PEI 295
                 +   E +          + A   L ++ K+ +AE + ++  + NP H      +
Sbjct: 128 GQRNGLNQIAEQIDYLRALPPP-LLAVMDLQARGKRLQAEELCKRFMQKNPRHIEGMRLL 186

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A I   + + +    L      E+I   +    +   ++A    + D+A  +A       
Sbjct: 187 AGIALEMGALDEAALL--LTTAEKIAPANQRVQLDCVQLARRQNNHDEARRRANKLANSD 244

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393
           P    F  LA IE     + +  L   +  L     DP 
Sbjct: 245 PENLQFQSLAAIEALQVSDFEAALAGFERILEKQPNDPA 283



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 15/168 (8%)

Query: 124 LLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           LL V    A  +   A E  +  M + P      +  L   +  +G L+ A    T A  
Sbjct: 150 LLAVMDLQARGKRLQAEELCKRFMQKNPR-HIEGMRLLAGIALEMGALDEAALLLTTAEK 208

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           I+P    V    VQ          A    N K  N+   N     L    +L+ +D    
Sbjct: 209 IAPANQRVQLDCVQLARRQNNHDEARRRAN-KLANSDPENLQFQSLAAIEALQVSDFEAA 267

Query: 243 IASYHDAIESLKLCDNSIMASICA--------AKSLISQNKKRKAEVI 282
           +A +   +E          A++ +         ++  + N+ RKA  +
Sbjct: 268 LAGFERILEKQPND----PATLTSLGHTLKTIGRAEEAINRYRKATAV 311


>gi|94263967|ref|ZP_01287769.1| TPR repeat [delta proteobacterium MLMS-1]
 gi|93455639|gb|EAT05821.1| TPR repeat [delta proteobacterium MLMS-1]
          Length = 847

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 96/320 (30%), Gaps = 49/320 (15%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY 158
              A  ++++   Q          L++    L     + A      +L   P   E  + 
Sbjct: 132 GRAAGALNAFKRAQPLQTAAEWSALVDA--LLLSGSLHEAERIHRQLLAADPENSELQMR 189

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L         + +A+    K L   PD   V  A+      A   S       + +   
Sbjct: 190 -LAAIFSSRQQIFAAEHIYRKLLAGQPDNEEVAAALQNLKKSAGRESEPSEAATEGRVER 248

Query: 219 K----------EWNRNRAIL--------LIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           +          E    +A L        L   + +   +GD+  +     ++L L     
Sbjct: 249 EGREEMGGQQVELPPQQAALKPGEQARDLTGLAEKMVRRGDLAGAEKTTRQALALEPRFT 308

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
            AS   A  L+++ +   A+ +L          ++   +     ++T  +L RA RL   
Sbjct: 309 PASFLLADILLTRGEFAAADQVLI---------QLIEEF----PDSTRARLTRA-RLAGW 354

Query: 321 NKESVESLVIVSKIALEMG-------SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
           +K+   S  + +   L            + A        ++  ++    LL  +   +  
Sbjct: 355 SKDYPRS--LAAYDQLIAQYPDDPIFQWEAARVAFWAKREVEAQERYQRLL--VPSVDQS 410

Query: 374 NTDKILYWTQSALHAMPDPL 393
              ++  W        P P 
Sbjct: 411 P--RVRVWLAGETDLEPKPA 428


>gi|326912317|ref|XP_003202500.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           [Meleagris gallopavo]
          Length = 794

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 82/270 (30%), Gaps = 19/270 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +    A +     LQ+      A+++L       G    A      ++    D     
Sbjct: 438 LTKDVVEAKDYYRRALQLNPQHNRALFNLGNLLKSQGKKEEAVILLRDSIKYGSDFADAY 497

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            ++       +    A        +N  E +     L     +   D G    +     +
Sbjct: 498 SSLASLLAEQERLKEAEEVYKAGIENCPESSD----LHNNYGVFLVDTGAPERAVSHYRQ 553

Query: 252 SLKLCDNSIMASICAAKSLISQNKKR-------KAEVILEKIWKVNPHPEIANIYTHLLS 304
           ++ L     +A +   +   S  + +       +A  +  K   ++P   +  +Y +   
Sbjct: 554 AIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVSRKAEILSP---LGALYYNTGR 610

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLL 363
                ++ R   L  +   + E+ + ++++   MG   +A       +       E + L
Sbjct: 611 YEEALQVYREAAL--LQPSNKETRLALAQVLAMMGRTKEAEKMTNHILDEDVECLECYRL 668

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L+ I     H   K L     AL     DP
Sbjct: 669 LSAIYSKQEH-YAKALEAIDKALQLKPKDP 697



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 14/165 (8%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L  LL  Q      +   A E  +  ++    ++     Y ++      G    A  + 
Sbjct: 499 SLASLLAEQ-----ERLKEAEEVYKAGIENCPESSDLHNNYGVFL--VDTGAPERAVSHY 551

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+ +SP        + + +    +   A  +  +  K +      +A +L        
Sbjct: 552 RQAIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVS-----RKAEILSPLGALYY 606

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           + G    +     E+  L  ++    +  A+ L    + ++AE +
Sbjct: 607 NTGRYEEALQVYREAALLQPSNKETRLALAQVLAMMGRTKEAEKM 651


>gi|302697995|ref|XP_003038676.1| hypothetical protein SCHCODRAFT_64572 [Schizophyllum commune H4-8]
 gi|300112373|gb|EFJ03774.1| hypothetical protein SCHCODRAFT_64572 [Schizophyllum commune H4-8]
          Length = 920

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 105/330 (31%), Gaps = 51/330 (15%)

Query: 99  NIPLARKMHSYVSQQHT--FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PA 151
           +   AR                   +  L ++ A  E + + + E L+ +L       P 
Sbjct: 529 DGAEARGRVGTARAILAYALKVYPNIKDLWIRAAELE-KAHGSRESLDDILSRAVEHCPQ 587

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           T    +     E    GD+ +A+    +A   +P++  +  A V+      E   A   L
Sbjct: 588 TEVLWLMG-AKEKWLAGDVPAAREVLERAFIANPESEQIWLAAVKLEAENGELDVAKQLL 646

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI----------- 260
            + +  A          +  R     D     A+     ++LK                 
Sbjct: 647 IRARDVAGTQRIWMKSAVFERQQGQLD-----AALETVSQALKKFPKFAKLYMIQGQIHA 701

Query: 261 -----MAS------------------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
                 A+                  I A++   + NK  KA  +LEK   VNP  +   
Sbjct: 702 SQRRYPAARQAYAAGLKAVPKEPTLWILASRLEEADNKSIKARALLEKARMVNPGVDTLW 761

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                + E   G  +    L    +E   S ++ S +A+   +  Q  A+++ A+K    
Sbjct: 762 AEAVGVEERAGGAGQAKAMLARALQECPSSGLLWS-MAIWAEARPQRKARSVDAVKKTND 820

Query: 358 KE-IFLLLAQIEQANSHNTDKILYWTQSAL 386
              +   +A++  +     +K   W   A+
Sbjct: 821 DSLVLCAIARLFWSERK-VEKAREWFGRAV 849


>gi|293372352|ref|ZP_06618737.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|298480252|ref|ZP_06998450.1| TPR-domain containing protein [Bacteroides sp. D22]
 gi|292632794|gb|EFF51387.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|298273533|gb|EFI15096.1| TPR-domain containing protein [Bacteroides sp. D22]
          Length = 320

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 85/231 (36%), Gaps = 10/231 (4%)

Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A    + + A +   E +             L     ++G+   A+    K   + P   
Sbjct: 38  AQRMGRPDYAVKCFTEALAIQEEFETMGY--LSQLYIQMGETAKARELLEKMAAMEPHLT 95

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +     + +++ +A+     K    +E N   A+           + D + +   
Sbjct: 96  STFLTLANVCFIQEDY-QAMEEAANKAIAIEEGN---AVAHYLLGKARKGQNDDLMTIAH 151

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT- 307
             +++ L D+ I A +  A++L++  + ++    ++ +   NP  E A +    + E+  
Sbjct: 152 LTKAITLKDDFIEARLLRAEALLNLKQYKEMMEDIDAVLAQNPEEETAMLLRGKVKESNG 211

Query: 308 --VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 +    + EIN  + ++ + + ++ +    + +A      A+++ P
Sbjct: 212 QGEEAEEDYKLVTEINPFNEQAYLYLGQLYINQKKLTEAIGLFDEAIELNP 262


>gi|209522682|ref|ZP_03271240.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209496731|gb|EDZ97028.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 1103

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 85/273 (31%), Gaps = 28/273 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             I  A + ++   + H    E    L    + L   Q N A    +  ++I        
Sbjct: 346 GKISSAIRAYNQALEIHPDFAEVHANL--ATMYLQNGQVNEAIAAYQKSIEIKPDLAAVH 403

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQK 214
           ++L     ++G+  +A      AL++ PD     +   +         E+  AI    + 
Sbjct: 404 WNLGRVYQQLGNTEAAINSWKIALELKPDLVEA-DFHFELGNILARRGEYEPAIASYQRA 462

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                 W    A +   R      +  +  +     +++ L        +  A+      
Sbjct: 463 ISRKPNWAEPYANIGCLR----VQQDRLKEALDQLQKAIALSPKMPELYLHTARIFTKLR 518

Query: 275 KKRKA----EVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESV 325
           + + A    + ++E        P   + Y +L +           +    +  ++  E  
Sbjct: 519 RHQDAINHYQKVIEL------QPNFPDAYANLANMQAILGQLPEAIANYQKTLQLKPEWA 572

Query: 326 ESLVIVSKIALEMGSID-QAHAKAMLAMKIAPR 357
           E    ++   ++      +A A    A+++ P 
Sbjct: 573 EVYCRLA--HIQKQKEPKEAVANLEKALELKPD 603



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 95/267 (35%), Gaps = 50/267 (18%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G ++SA R   +AL+I PD   V   +   Y+   + + AI    +  +   +     A
Sbjct: 345 QGKISSAIRAYNQALEIHPDFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDL----A 400

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-------SICAAKSLIS------- 272
            +           G+  A+ +    +L+L  + + A       +I A +           
Sbjct: 401 AVHWNLGRVYQQLGNTEAAINSWKIALELKPDLVEADFHFELGNILARRGEYEPAIASYQ 460

Query: 273 ----------------------QNKKRKAEVILEKIWKVNPH-PEI----ANIYTHLLSE 305
                                 Q++ ++A   L+K   ++P  PE+    A I+T L   
Sbjct: 461 RAISRKPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSPKMPELYLHTARIFTKLRRH 520

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364
                +    ++ E+     ++   ++ +   +G + +A A     +++ P   E++  L
Sbjct: 521 --QDAINHYQKVIELQPNFPDAYANLANMQAILGQLPEAIANYQKTLQLKPEWAEVYCRL 578

Query: 365 AQIEQANSHNTDKILYWTQSALHAMPD 391
           A I++             + AL   PD
Sbjct: 579 AHIQKQKEPKEAVAN--LEKALELKPD 603



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 16/237 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREF 155
                A   +     +     E    +  L VQ    +   +   + + +  ++P     
Sbjct: 450 GEYEPAIASYQRAISRKPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSPKMPELYLH 509

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               ++ +  R  D   A  +  K +++ P+ P     +     +  +   AI    +  
Sbjct: 510 TAR-IFTKLRRHQD---AINHYQKVIELQPNFPDAYANLANMQAILGQLPEAIANYQKTL 565

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +   EW      L          + +   +  +  ++L+L  +   A       L     
Sbjct: 566 QLKPEWAEVYCRLA-----HIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 620

Query: 276 KRKAEVILEKIWKV--NPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
             KA  + ++ W+      P    IA I+++  S      L +   LE I   S+E+
Sbjct: 621 LGKARKVADRYWENCGKTLPVLCAIAYIFSYTQSGACEQALAKLEHLETICNNSMET 677



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 12/193 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G+   A     +A+   P+       +    V       A+  L +    +       
Sbjct: 448 RRGEYEPAIASYQRAISRKPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSP--KMPE 505

Query: 226 AILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             L  AR      +  D I  Y   IE   L  N   A    A       +  +A    +
Sbjct: 506 LYLHTARIFTKLRRHQDAINHYQKVIE---LQPNFPDAYANLANMQAILGQLPEAIANYQ 562

Query: 285 KIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           K  ++   PE A +Y  L      +     +    +  E+  +  E+   +  +     +
Sbjct: 563 KTLQLK--PEWAEVYCRLAHIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 620

Query: 341 IDQAHAKAMLAMK 353
           + +A   A    +
Sbjct: 621 LGKARKVADRYWE 633


>gi|237799804|ref|ZP_04588265.1| hypothetical protein POR16_13290 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|237806349|ref|ZP_04593053.1| hypothetical protein POR16_37819 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022659|gb|EGI02716.1| hypothetical protein POR16_13290 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331027462|gb|EGI07517.1| hypothetical protein POR16_37819 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 654

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 77/273 (28%), Gaps = 42/273 (15%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A +               L   L  Q    +   + A    +              
Sbjct: 150 DAQTAIRETEQA----LGPQPALTRRL--QAIQEQVAVDKAARGYK-------------- 189

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                +   GD  +A   A  A+   P      + +V   +   ++  A +   +     
Sbjct: 190 -----ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALMAQGQYEEARSAATEALA-- 242

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              N N A LL  R       GD   +  D  ++  L   ++      A    +  + R+
Sbjct: 243 --LNGNDATLLAQRGQLRQRLGDQNGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPRE 297

Query: 279 AEVILEKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESL 328
           A   L++        P  E+   Y    + +    +   KR  R   +      ++  + 
Sbjct: 298 ALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQAGLKPREVQDAAYTA 357

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +  S+ A  +    +            P +++F
Sbjct: 358 MRTSEDAQAIAWFKRVLDYQRAGDLQMPAQQVF 390



 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 25/210 (11%)

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
            L   L              G  ++A  +   A  +        +F  +     L V   
Sbjct: 167 ALTRRLQAIQEQVAVDKAARGYKALARGDNETA--VSEARDAVRSFPKQMAYRKLLVSAL 224

Query: 131 LAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           +A+ QY  A         +    AT   A      +  R+GD N A++   +AL +  + 
Sbjct: 225 MAQGQYEEARSAATEALALNGNDAT-LLAQRGQLRQ--RLGDQNGARQDFAQALAVG-NL 280

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SLENADK 239
           P   +A +  Y    +   A+  L Q +   +         A  L        +L+   +
Sbjct: 281 PLREQASL--YAAMGQPREALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKR 338

Query: 240 GD------MIASYHDAIESLKLCDNSIMAS 263
            D             A  +++  +++   +
Sbjct: 339 VDRQAGLKPREVQDAAYTAMRTSEDAQAIA 368



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 108/330 (32%), Gaps = 39/330 (11%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--- 137
             +   A    L+++A  +     K      Q+         YL   Q   A    +   
Sbjct: 62  RQRADAAQLRDLIALAERD-----KYRRDHPQRFPKARPKPGYLEGNQALRAYTNRDYED 116

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESC----RIGDLNSAQRYATKALDISPDAPWVTEA 193
            A      + Q P  +      +  E+     R+ D  +A R   +AL   P      +A
Sbjct: 117 SARHARNAIAQAP--KNLDYRMMLIEALQLQQRLDDAQTAIRETEQALGPQPALTRRLQA 174

Query: 194 VVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL---ENADKGDMIASY 246
           + +Q           + A          A++  R+    +  R L       +G    + 
Sbjct: 175 IQEQVAVDKAARGYKALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALMAQGQYEEAR 234

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVN--PHPEIANIYTHL 302
             A E+L L  N   A++ A +  + Q    +  A     +   V   P  E A++Y  +
Sbjct: 235 SAATEALALNGN--DATLLAQRGQLRQRLGDQNGARQDFAQALAVGNLPLREQASLYAAM 292

Query: 303 -LSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-- 358
                 + +L++A    E+   + V+    +S+   + G++D    +      + PR+  
Sbjct: 293 GQPREALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGALDT-FKRVDRQAGLKPREVQ 351

Query: 359 -EIFLLLAQIEQANSHNTDKILYWTQSALH 387
              +  +       +    + + W +  L 
Sbjct: 352 DAAYTAM------RTSEDAQAIAWFKRVLD 375


>gi|308048523|ref|YP_003912089.1| doubled CXXCH domain protein [Ferrimonas balearica DSM 9799]
 gi|307630713|gb|ADN75015.1| doubled CXXCH domain protein [Ferrimonas balearica DSM 9799]
          Length = 760

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 92/292 (31%), Gaps = 14/292 (4%)

Query: 38  RTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97
           +    V  S +   +       +     LS P+ L        + +   A+ T  +    
Sbjct: 467 QQPAIVRASAVAALIDYGAPALSTLDAALSDPSALVRASAIPVFAQAPDAVRTARLIPLL 526

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +  LA +               L  L + Q            + L+ + Q         
Sbjct: 527 DDPTLAVR----DEAVKALAGVPLAQLGQAQA----GYQAALEDYLQRLEQNAD--LPGN 576

Query: 158 Y-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     RIG    A  +   AL++ P        +V       E +     L+Q   
Sbjct: 577 RLNLAVVLTRIGQPQQAVAHYRAALEMDPRFLPARLNLVTLLSQMGETAEVSGLLDQGLA 636

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +   + +RA L   ++L  A+ G + A+      +LK     +      A       +K
Sbjct: 637 LSDVADADRAQLGYLKALALAESGQIEAALVWLDRTLKWQPTHLRGHYNRALIQDRLGRK 696

Query: 277 RKAEVILEKIWKVNPH-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESV 325
            +A   L++   + P  P++  A++Y +    N    L     L ++  +  
Sbjct: 697 EEALAALQQGLVLAPASPDLLYASVYLNATLGNLPQALSDLATLRQLRPDDP 748


>gi|260788069|ref|XP_002589073.1| hypothetical protein BRAFLDRAFT_120892 [Branchiostoma floridae]
 gi|229274247|gb|EEN45084.1| hypothetical protein BRAFLDRAFT_120892 [Branchiostoma floridae]
          Length = 945

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 107/306 (34%), Gaps = 45/306 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E+LE +LQ      P      +          GD+ +A++  + A  
Sbjct: 583 RAAYFEKNH-GTREQLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARKILSLAFQ 640

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-------NRAILLIARSLE 235
            +P++  +  A V+      E  RA   L + + +A               +    ++ +
Sbjct: 641 ANPNSEEIWLAAVKLESENNEDERARRLLAKARASAPTARVFMKSVKLEWVLKETEKAKD 700

Query: 236 NAD----------------------KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             D                      +G   A+     + LK C +SI   +  ++     
Sbjct: 701 LIDEGLKHYSDFPKLWMMRGQILEQEGRTDAAREAYNQGLKKCPHSISLWLLLSQLEEKL 760

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRL-EEINKESVESLVIV 331
               KA  ILEK    N  P+ A ++   +  E      + A  L     +E   +  + 
Sbjct: 761 CNITKARAILEKSRLKN--PQCAELWLESVRLEWRASNRQIAQSLMARALQECPTAGRLW 818

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++ A+ M +  Q   K++ A+K       + L +A++  +     +K   W   A+   P
Sbjct: 819 AE-AIFMEARPQRKTKSVDALKRCEHDAHVLLAVARLFWSERK-VNKSREWFNRAVKIDP 876

Query: 391 DP--LW 394
           D    W
Sbjct: 877 DQGDAW 882



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 75/210 (35%), Gaps = 17/210 (8%)

Query: 168 GDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           G +  A+     AL + P   + W   A  ++             L    + A       
Sbjct: 558 GAIECARAIYAHALTVFPSKKSIWQRAAYFEKN------HGTREQLEALLQRAVAHCPKA 611

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +L +  +      GD+ A+      + +   NS    + A K     N+  +A  +L K
Sbjct: 612 EVLWLMGAKSKWLAGDVPAARKILSLAFQANPNSEEIWLAAVKLESENNEDERARRLLAK 671

Query: 286 IWKVNPHPEIANIYT-HLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGS 340
                P    A ++   +  E  + + ++A  L     +   +  +  ++  +I  + G 
Sbjct: 672 ARASAPT---ARVFMKSVKLEWVLKETEKAKDLIDEGLKHYSDFPKLWMMRGQILEQEGR 728

Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
            D A       +K  P    ++LLL+Q+E+
Sbjct: 729 TDAAREAYNQGLKKCPHSISLWLLLSQLEE 758



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 22/225 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+  A+       D +P+ P    A  +   +  +   A   +    K  +   ++  + 
Sbjct: 294 DVKKARLLLKSVRDTNPNHPPAWIASARLEEVTGKVQAARNII---MKGTEVCQKSEDVW 350

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L A  L+  D G          ++++    S+   I AA+    + + R  + I  K  +
Sbjct: 351 LEAIRLQPTDIG-----RAVVTQAVRQISGSVRLWIKAAEI---EEEMRAKKRIFRKALE 402

Query: 289 VNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
             P+   +      L   E+    L RA    E   +SVE  + ++K+     + + A  
Sbjct: 403 HIPNSVRLWKAAVELEEPEDARIMLSRA---VECCPQSVELWLALAKL----ETYENARK 455

Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               A +  P    I++  A++E+A  +N +        AL ++ 
Sbjct: 456 VLNKARENIPTDRQIWITAAKLEEAQKNNDNVNRI-VDRALQSLR 499


>gi|156360950|ref|XP_001625285.1| predicted protein [Nematostella vectensis]
 gi|156212111|gb|EDO33185.1| predicted protein [Nematostella vectensis]
          Length = 935

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 86/256 (33%), Gaps = 34/256 (13%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224
             D+ SA+     A   +P++  +  A V+      E  RA   L + + NA        
Sbjct: 613 ANDIPSARSILALAFQANPNSEEIWLAAVKLESENNEDQRARKLLQRARMNACTARVMMK 672

Query: 225 ------------RAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257
                        A  L+  +++                  + ++  +       +K C 
Sbjct: 673 SIKLEWVLGNIPEANKLLDEAVQKYPDFAKLWMMKGQLQEQEKNLPEAREAYKTGVKKCP 732

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALR 316
            SI   +  ++      +  KA  +LE+  + NP  PE+      +  E   G+   A  
Sbjct: 733 TSIPLWLLLSRLEEKTGQATKARSVLEQGRQRNPKSPELWLEAVRI--ETRGGRKDFART 790

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNT 375
           L     +   +  ++   A+ M    Q   +++ A+K       + L +A++  +     
Sbjct: 791 LMAKAMQECPTAGVLWSEAIFMEPRPQRKTRSVDALKRCEHDAHVLLAVAKLFWSERK-V 849

Query: 376 DKILYWTQSALHAMPD 391
            K   W   A+   PD
Sbjct: 850 SKARDWFNRAVKLDPD 865



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 32/223 (14%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            NIP A K+     Q           L  ++ Q+   E+    A E  +  ++   T   
Sbjct: 681 GNIPEANKLLDEAVQ----KYPDFAKLWMMKGQLQEQEKNLPEAREAYKTGVKKCPTSIP 736

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               L     + G    A+    +    +P +P +    V+          A T + +  
Sbjct: 737 LWLLLSRLEEKTGQATKARSVLEQGRQRNPKSPELWLEAVRIETRGGRKDFARTLMAKAM 796

Query: 216 KNAKEWNR--------------------------NRAILLIARSLENADKGDMIASYHDA 249
           +                                 + A +L+A +     +  +  +    
Sbjct: 797 QECPTAGVLWSEAIFMEPRPQRKTRSVDALKRCEHDAHVLLAVAKLFWSERKVSKARDWF 856

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             ++KL  +   A     +  +    + + E +  K  +V PH
Sbjct: 857 NRAVKLDPDFGDAWAYFYRFELQHGTEAQQESVSHKCVQVEPH 899


>gi|15606587|ref|NP_213967.1| hypothetical protein aq_1402 [Aquifex aeolicus VF5]
 gi|2983806|gb|AAC07363.1| putative protein [Aquifex aeolicus VF5]
          Length = 670

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 34/205 (16%)

Query: 85  YKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           Y+A L      +A  N   A ++   V      + E +  L+     +    Y+ A+   
Sbjct: 222 YRADLTQAGKLLAQGNPEEAIELAKKVLLSDPTNVEAM--LIIGDAYMELGDYSNAYSYY 279

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +M L        A+  L + S  +     A  YA +                        
Sbjct: 280 KMALGFDKENLRAIKGLMYASLALKRYEEAYNYARE------------------------ 315

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
                  L +      +  R +A+ L  ++ +   + +   +Y    E+ KL  +     
Sbjct: 316 -------LGRLGVENGDIERVKALYLAKKAEDFVKRKEYDKAYIYLKEAEKLAPDDPYVL 368

Query: 264 ICAAKSLISQNKKRKAEVILEKIWK 288
           +        +    +A     + +K
Sbjct: 369 LLLGDIYFGRGDYTQAYKYYVEAYK 393


>gi|172061374|ref|YP_001809026.1| HemY domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171993891|gb|ACB64810.1| HemY domain protein [Burkholderia ambifaria MC40-6]
          Length = 395

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/409 (11%), Positives = 115/409 (28%), Gaps = 45/409 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  ++  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAILFGIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVITIVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAARDALAVDAN---- 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                  Q A +      AH   E   +            +       +   A+  A   
Sbjct: 119 -------QGAASLVAATAAHRMHEYTRRDD----------WLSKVDAPEWQDARLLAAAD 161

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +           A +       +   A     + ++  K W     +       E     
Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221

Query: 241 DMIASYHDAIESL----KLCDN--------SIM-------ASICAAKSLISQNKKRKAEV 281
             +     A E+L    +   +                   +  AA+ L+   ++ +A  
Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPLERQSPRLADLAAELLVPLERRPEARR 281

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           I+E+    N    +   Y      + +  +++A   ++ + +  + L  + ++  +    
Sbjct: 282 IVEEALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLW 341

Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +A +    A+K A  +         LA++ +          ++ +SAL
Sbjct: 342 GKAQSFLEAALKQADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|319945395|ref|ZP_08019656.1| tetratricopeptide repeat protein [Lautropia mirabilis ATCC 51599]
 gi|319741388|gb|EFV93814.1| tetratricopeptide repeat protein [Lautropia mirabilis ATCC 51599]
          Length = 634

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 115/306 (37%), Gaps = 41/306 (13%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----Q 148
           ++    +  LAR+         +  +      L V+    +  Y  A + L+ +L    +
Sbjct: 124 LAAQTGDARLARRATEIAIVTGSLSDALDSARLWVR---LDPTYPNARKALDTLLLANGR 180

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +          L  ++ + G L++A              P + E ++        W+ A 
Sbjct: 181 VTEVEPALTRQL-TQARQAGTLDTAY-------------PQLQEKLLNLPDRRAAWALA- 225

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                ++ +A + +  +A L+  R+    + G   A+  +A+ + +L  ++I A + + +
Sbjct: 226 -----QRLSASDLDNIQARLM--RARLAHEAGQQQAATDEALAAQQLAPDNIEAVLASVQ 278

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKE 323
            L S+   R+   +L   + +  HP+      A     + SE     +    R++ +  +
Sbjct: 279 LLQSRPGGRQRAAVLLGNY-LQKHPDDLRALKAQGLLQIASEQNDAAIATLSRVQSLEPD 337

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-----IFLLLAQIEQANSHNTDKI 378
           +  +L  ++++  +     +A       + +    E      FL L++I Q  + +    
Sbjct: 338 NPATLYTLAQLHHQKHDYARATEALQRYVALPEDIERDNGNAFLFLSEIAQKQN-DQAGA 396

Query: 379 LYWTQS 384
           + W + 
Sbjct: 397 IQWLER 402


>gi|313240003|emb|CBY32363.1| unnamed protein product [Oikopleura dioica]
          Length = 1054

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 7/226 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  +  +Q  +T   A  +L     + GD+  A     KA+ +          
Sbjct: 185 GRLEEAEECYQKAIQCNSTFAVAYSNLGCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFIN 244

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +  A+ + RA++   +        N   A++    +    ++G +  +      ++
Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310
           +L  N   A    A +L  +    +AE   E+  K++P H +  N   ++  E   T   
Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++   R  +   +   +   ++ I  + G    A      A++I P
Sbjct: 361 MELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYKQAIRIFP 406



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 47/160 (29%), Gaps = 11/160 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL + P+       +            A+    +  K   ++           +    
Sbjct: 331 EQALKLHPEHADSLNNLANIKREQNRTHEAMELYQRALKAKPDFP----AAHSNLASILQ 386

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            +G    +     +++++      A      +     + ++A    +    +N  P  A+
Sbjct: 387 QQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISIN--PNFAD 444

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332
            +++L S      NT   ++       +     E+    +
Sbjct: 445 AFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARA 484


>gi|313226628|emb|CBY21773.1| unnamed protein product [Oikopleura dioica]
          Length = 1054

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 7/226 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  +  +Q  +T   A  +L     + GD+  A     KA+ +          
Sbjct: 185 GRLEEAEECYQKAIQCNSTFAVAYSNLGCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFIN 244

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +  A+ + RA++   +        N   A++    +    ++G +  +      ++
Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310
           +L  N   A    A +L  +    +AE   E+  K++P H +  N   ++  E   T   
Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++   R  +   +   +   ++ I  + G    A      A++I P
Sbjct: 361 MELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYKQAIRIFP 406



 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 47/160 (29%), Gaps = 11/160 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL + P+       +            A+    +  K   ++           +    
Sbjct: 331 EQALKLHPEHADSLNNLANIKREQNRTHEAMELYQRALKAKPDFP----AAHSNLASILQ 386

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            +G    +     +++++      A      +     + ++A    +    +N  P  A+
Sbjct: 387 QQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYKSAISIN--PNFAD 444

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332
            +++L S      NT   ++       +     E+    +
Sbjct: 445 AFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARA 484


>gi|261197553|ref|XP_002625179.1| DnaJ domain-containing protein [Ajellomyces dermatitidis SLH14081]
 gi|239595809|gb|EEQ78390.1| DnaJ domain-containing protein [Ajellomyces dermatitidis SLH14081]
          Length = 762

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 19/186 (10%)

Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+  +  L          A   +  ML+          +          G+   A R+ 
Sbjct: 413 RLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDPDALLIRG--RLFYAQGENEQAIRHF 470

Query: 178 TKALDISPDAPWVT------EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225
             AL++ PD+          + +++          A+++  AI    +  +   +     
Sbjct: 471 KLALNLDPDSTQAVRYLRMVQKLLRMKDEGNAAFKARKYQEAIDVYTKALEVDPKNKDIN 530

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + LL  R+    +  +   +  D  ++LKL  + + A    AK+  +     +A    +K
Sbjct: 531 SKLLQNRAQAYLNLSNYDKAIEDCTDALKLDPSYVKAQRVRAKAYGASGNWEEAAREFKK 590

Query: 286 IWKVNP 291
           I + NP
Sbjct: 591 IAEANP 596


>gi|46362551|gb|AAH66556.1| C20orf14 homolog (H. sapiens) [Danio rerio]
          Length = 944

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+  N   E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 582 RAAYFEKN-NGTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 639

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 640 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVRLEWVLGNIEAAHE 699

Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++ +                  +  +     + LK C +S+   +  ++     
Sbjct: 700 LCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLEEKV 759

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP  PE+      L     +  +  A  L     +E   S ++ 
Sbjct: 760 GQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 817

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +   P
Sbjct: 818 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEP 875

Query: 391 D 391
           D
Sbjct: 876 D 876



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 22/225 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  + 
Sbjct: 293 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSEDVW 349

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L A  L+  D    + +     ++++    S+   I AA+        R  + +L K  +
Sbjct: 350 LEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALE 401

Query: 289 -VNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            V+    +      L   E+    L RA    E    SVE  + ++++     + + A  
Sbjct: 402 NVSKSVRLWKTAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENARR 454

Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 455 VLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 498


>gi|325295455|ref|YP_004281969.1| hypothetical protein Dester_1275 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065903|gb|ADY73910.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 597

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 106/296 (35%), Gaps = 30/296 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHEKLEMMLQIPA---- 151
            N   A +      ++   +   + YLLE     A  ++  +      + +   P     
Sbjct: 77  GNFEKAYRAIREAVKKDPKN---INYLLEAARFTANLKKLEDAEEFAKKALSIDPKNPKA 133

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
            +  A  S+       G+   A+RY  + L  +PD       +   Y+  K++  A   L
Sbjct: 134 LKLLAGISIIK-----GNKKEAERYYKRILSTAPDKS-TYIMLANLYINEKKYLEAQKLL 187

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K   ++  +  I      +    KG +  + +   +++KL  N   A +   K  +
Sbjct: 188 TEALK---KYPSDFLINYFLGEVSFL-KGKINTARNYIEKAIKLNPNFESAYVLLGKIYL 243

Query: 272 SQNKKRKAEVILEKIWKVNPHPE----IANIY-THLLSENTVGKLKRALRLEEINKESVE 326
            +   +KAE  LEK+   N  P+    +  I+  +L    T   L    RL +++  ++ 
Sbjct: 244 KEKDYKKAEKFLEKVLDKN--PDNIYALKEIFIIYLKQNKTNEALNVINRLVKLDPYNL- 300

Query: 327 SLVI--VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
             ++  V+    EM    +         K+ P       +  +    S N +K L 
Sbjct: 301 -RLLSWVAASLFEMKEYKKVIPLIERITKLNPDNPNVYFMLGLAYEMSGNYEKALE 355



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 39/94 (41%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
              A    +       L+ +LQI  + +   Y  YF + R  +L+ A++ A KAL   P+
Sbjct: 442 AYFAEKLGKDKETEGYLKKLLQIEPSPDVYNYLAYFYANRGINLDEAEKLAEKALKAEPE 501

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            P   + +        ++  A  +L +  K  ++
Sbjct: 502 NPAFLDTLGWVLYKKGDYKNACKYLEKALKLKQD 535


>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
 gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
 gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
 gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
 gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
 gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
 gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
          Length = 745

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 110/342 (32%), Gaps = 34/342 (9%)

Query: 41  PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK---RNYDKGYKALYTGLMS-IA 96
              IL +      +       + +F +  +      ++   + YDK  +A     M+ + 
Sbjct: 6   LLFILVLGVCLFTSCGNFVKTNIYFSAAESAFDSGKYEDAIKYYDKVIEADSGNAMAYLG 65

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF 155
                 A  +  Y      F     +     +   A+     + E+ E  L+      E 
Sbjct: 66  KGLALDA--LGKYEEALEFFDKAIEINKDLAKAYNAKGTTLASLERYEESLENFKKAAEL 123

Query: 156 A----------VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
                       Y L      +G    A +YA KAL ++P +               +  
Sbjct: 124 KPKNSAYQNDVAYGL----NNLGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLD 179

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            AI   ++  + +  +          +S+     G    +     + L++  + + A   
Sbjct: 180 EAIECYDKAIELSPTYTN----AYYNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITS 235

Query: 266 AAKSLISQNKKRKAEVILEKI---WKVNPHPEIANI---YTHLLSENTVGKLKRALRLEE 319
               L    K  KA    +     +  +P+P +      Y     +N + +  +A++LE 
Sbjct: 236 KGYCLNELGKYEKAIECFDTAIEKYPKDPYPYVCKATSLYYLGKYDNALEECNKAIKLEY 295

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              +   S +  +KI +E G I++A       + IA    ++
Sbjct: 296 TFPD---SYIWKAKILVEKGDIEEARKSCDEFLAIAEDASVY 334


>gi|253700327|ref|YP_003021516.1| hypothetical protein GM21_1704 [Geobacter sp. M21]
 gi|251775177|gb|ACT17758.1| TPR repeat-containing protein [Geobacter sp. M21]
          Length = 265

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 13/191 (6%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A +   A K    ++ +       L       +     ++  A      + ++       
Sbjct: 55  ADDAIAALKKGLELAPEDLDGITAL-----GDVYFESGKHKDALGCYRKVTELQPKDCDG 109

Query: 157 VY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
                L + +    D   A +   KAL++ P   +   A+   Y    E  +AI   ++ 
Sbjct: 110 YVSMGLVYNAMERADE--ALKSFQKALELDPKNVFALNAMGDLYYGLGENEKAIEAYHR- 166

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                E +   A           D  D+ ++ H+ +E+++L  +  M+ +      I ++
Sbjct: 167 ---GIEIDPADATARFNLGELYYDMDDLESAEHETLEAVRLDPDFTMSYLTLGNICIDED 223

Query: 275 KKRKAEVILEK 285
           + ++A    E 
Sbjct: 224 RTQEAIKYFES 234


>gi|47086729|ref|NP_997820.1| pre-mRNA-processing factor 6 [Danio rerio]
 gi|34784057|gb|AAH56710.1| C20orf14 homolog (H. sapiens) [Danio rerio]
          Length = 944

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+  N   E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 582 RAAYFEKN-NGTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 639

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 640 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVRLEWVLGNIEAAHE 699

Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++ +                  +  +     + LK C +S+   +  ++     
Sbjct: 700 LCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLEEKV 759

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP  PE+      L     +  +  A  L     +E   S ++ 
Sbjct: 760 GQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 817

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +   P
Sbjct: 818 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEP 875

Query: 391 D 391
           D
Sbjct: 876 D 876



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 22/225 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  + 
Sbjct: 293 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSEDVW 349

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L A  L+  D    + +     ++++    S+   I AA+        R  + +L K  +
Sbjct: 350 LEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALE 401

Query: 289 -VNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            V+    +      L   E+    L RA    E    SVE  + ++++     + + A  
Sbjct: 402 NVSKSVRLWKTAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENARR 454

Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 455 VLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 498


>gi|262373264|ref|ZP_06066543.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262313289|gb|EEY94374.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 572

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 2/167 (1%)

Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R+ +  +  R+L+   +  D+ A+ + A   ++     + A    +   +  ++   A  
Sbjct: 78  RSNSTTIKQRALDVALEYNDLQAALNIATHWVEQEPKDVPALFYLSHIALKTHEYELAAK 137

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340
            L+KI  ++P  ++  I   +  EN   +      L     K++   L +++ +  + G 
Sbjct: 138 TLDKILNIDPTSDLEQILAGIAPENAQDREILLNALRASTEKDNPSILALIAGLEAQDGL 197

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            +QA      A++   +   F+L+         + +    W   A  
Sbjct: 198 YEQALKNINRALRKRSKSTSFILMKANLLMALQDDEATQKWFAKASR 244



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 101/317 (31%), Gaps = 53/317 (16%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G +A   GL   A  NI  A +  S  +            LL       +     A +K 
Sbjct: 190 GLEA-QDGLYEQALKNINRALRKRSKSTSFILMK----ANLLMA----LQDD--EATQKW 238

Query: 144 EMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWV---------- 190
                        +     E+    +I D  +A       +   P+A             
Sbjct: 239 FAKASRKNKENLDIR--LAEARYYIKINDQQTALEKLEDVIKDHPNAEEALFIAGLTSID 296

Query: 191 -------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDM 242
                   + +V     +K  + A  +L    +  + +   +A   L+  SL    + +M
Sbjct: 297 LKQYEKAEQYLVDLRNSSKYQNEAYYYLAINAQRKQHYETAKAYYRLVDGSLYIVSRRNM 356

Query: 243 I---ASYHDAIESLKLC-------DNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291
           I          ++L+                  A A  L   N K+ A  +L++  K  P
Sbjct: 357 IAIFEKQEQLNDALRFLTQERVNYPQHASFLYQAQADILKKMNNKKAALALLDEAIKNLP 416

Query: 292 H-PEIANIYTHLL---SENTVGKL-KRALRLEEINKESVESLVIVS-KIALEMGSIDQAH 345
             PE+  IY  +L         KL K   +L  I   S   L   +  +AL+   + +A 
Sbjct: 417 DDPEL--IYAEVLLLDPFTDRDKLDKTLKQLLAIEPNSPTYLNAYAYTLALQNRRLKEAR 474

Query: 346 AKAMLAMKIAPRKEIFL 362
             A LA++ AP +   L
Sbjct: 475 KYAELALEFAPEQASIL 491


>gi|34581593|ref|ZP_00143073.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262978|gb|EAA26482.1| unknown [Rickettsia sibirica 246]
          Length = 334

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 84/260 (32%), Gaps = 11/260 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+   F  +  +   V I   +    T+ F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGFTFIERFDSKVFINLYDYNIETTLFFSLILGLLLLISCFIVIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116
                +  P+ + ++  KR  +    AL   +++ A     +    A      +S +   
Sbjct: 61  FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFAEYIMNNKAKSASIARKNLSSEDLK 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    L+           +      + ++       +   +L            A+ Y
Sbjct: 118 DSQEFHNLILAVTEE---DVDRKIAYFQKLITSKEFVCYGSKNLAKLYYDKSFYEQAENY 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235
           ATKA + +         +++ Y     W++ I   N+  K +  E     A   +  + +
Sbjct: 175 ATKAYNFNALDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKYESMPEIAEYYLLAAKQ 234

Query: 236 NADKGDMIASYHDAIESLKL 255
             +  +   +      ++ L
Sbjct: 235 EVESNNTANAIDYLATAIDL 254


>gi|294085101|ref|YP_003551861.1| putative TPR repeat-containing protein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664676|gb|ADE39777.1| putative TPR repeat protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 734

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 81/274 (29%), Gaps = 18/274 (6%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEY-LVYLLEVQIALAERQYNIAHEKL-EMML 147
             L+++  +   +A+           F     L+ LL       + + + A     + + 
Sbjct: 18  QALIAL-YNQGEMAQTERQCRMALQEFPRSVTLLNLLGA-AFQTQGKLDFAASAFVKAIA 75

Query: 148 QIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             P   +    Y +   +    D  +A+    KAL ++PD       +        +   
Sbjct: 76  LNPKDAQLHNNYGVVLLALSSFD--TARACFLKALKLTPDYVEAHNNLGNALRSLGQLDA 133

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+T  N+       + +        R +       M A+     ++L +    I A I  
Sbjct: 134 ALTRYNKAIAIQPTYGQ----AHYNRGVTLQQMQQMTAALASYEDALAVQPEFIEAHINR 189

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
                   K   A    E    ++P     H  +  IY                +   + 
Sbjct: 190 GVIFQQLGKADDAITSYELALTIDPDHAETHNNMGIIYAGTGDHERAQ--TYYEKALALK 247

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            + VE  + ++ +  E G    A A    A+   
Sbjct: 248 PDYVEGYINLATMLFETGHTAAAIAHLETALGYD 281



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 64/225 (28%), Gaps = 37/225 (16%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            + + A    E  +   P   E    ++       GD   AQ Y  KAL + PD      
Sbjct: 197 GKADDAITSYELALTIDPDHAET-HNNMGIIYAGTGDHERAQTYYEKALALKPDYVEGYI 255

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +          + AI  L         ++ N A+      L    +GD++ +      +
Sbjct: 256 NLATMLFETGHTAAAIAHLETAL----GYDANDAMAHNLYGLLKKAQGDVVGALASYATA 311

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           +    +                                PH  I        S      L 
Sbjct: 312 IAQNPDF-----------------------------AEPH--INTGLALQQSGAHASALA 340

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              R  +IN +  E+    +    E+G  D A A    A+ +AP 
Sbjct: 341 AFDRAIKINPDHAEAYNNKAVTLQELGRFDAALASYDQAITLAPD 385


>gi|307194475|gb|EFN76767.1| Pre-mRNA-processing factor 6 [Harpegnathos saltator]
          Length = 931

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 35/191 (18%)

Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           +     E LE +LQ      P +    +          GD+ +A+   + A   +P++  
Sbjct: 574 KTYGTRESLEALLQRAVAHCPKSEILWLMG-AKSKWLAGDVPAARGILSLAFQANPNSEE 632

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLE 235
           +  A V+      E+ RA   L + + +A                     A+ L+  +LE
Sbjct: 633 IWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALKNLDAALHLLKEALE 692

Query: 236 NADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             D                G+   +     +++K C +SI      ++    +N+  KA 
Sbjct: 693 AFDDFPKLWLMKGQIEEQQGNADKALETYNQAIKKCPHSIPLWRLLSQLEHRRNQVTKAR 752

Query: 281 VILEKIWKVNP 291
            +LEK    NP
Sbjct: 753 SVLEKARLKNP 763



 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +          
Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 335

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     +S++    S+   I AA        KR    +  K 
Sbjct: 336 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETEVKAKR---RVFRKA 385

Query: 287 WKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SV+  + ++++     + D A
Sbjct: 386 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468


>gi|302344515|ref|YP_003809044.1| hypothetical protein Deba_3097 [Desulfarculus baarsii DSM 2075]
 gi|301641128|gb|ADK86450.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
           2075]
          Length = 803

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 10/207 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +   L+ A++   +A+ + P    +   +V+  +  ++   A   L +      E    
Sbjct: 217 MKQNKLDQAEKTLREAIAMRPQEARLQLMLVELLMRRQKSDEAGKTLREIIARHPENESY 276

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           R    ++ +      G    +    +E++++  +SI  SI  A    S+ +  KA+  L+
Sbjct: 277 R----LSLARFYETTGQEKKAEETYLEAVRMAPDSIWPSILTATFYASRGQGHKAQAYLD 332

Query: 285 KIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +  K+ P    P  A    +L         K+  ++     ++  +L +  +I LE G  
Sbjct: 333 QAKKIAPDSPVPPTAMAELNLEQGRVELAQKQIKQVLARWPKNAAALTLQGRIQLEDGQA 392

Query: 342 DQAHAKAMLA---MKIAPRKEIFLLLA 365
            QA A        M  +P    +  +A
Sbjct: 393 QQAVASFTQVIGDMPESPEAYFYRAMA 419



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 104/318 (32%), Gaps = 51/318 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM----MLQIPATR 153
             + LA+K    V  +   +   L   L+ +I L + Q   A          M + P   
Sbjct: 356 GRVELAQKQIKQVLARWPKNAAALT--LQGRIQLEDGQAQQAVASFTQVIGDMPESPEAY 413

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--- 210
                ++ +++   G+   AQ    K + ++P+       +        E ++AI     
Sbjct: 414 F--YRAMAYQAL--GERQLAQADVAKTISLAPENIRARFFMASLQAQGGEVTQAIGEVNE 469

Query: 211 ------------------------LNQKKKNAKEWNRNR---AILLIARSLENADKGDMI 243
                                   L+Q + +     R R   A+           + D +
Sbjct: 470 IIKQEPKNAEAMSMRGQLYMSQGNLSQAEADFNALTRLRPDMAVGYYLMGRLLETRKDPV 529

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298
            +      +L    + + A        + Q + ++A   +E            H  +A++
Sbjct: 530 KAAAQYELALAKDPDYLPALRRVVFLDLQQGQAQRAVARVESQLAKAKRKDAVHTFLADV 589

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y  L  +  + + +    L  IN E+  +++ ++ ++   G +D+A       + + P  
Sbjct: 590 YQRL-GQTAISRQQYERALA-INPENTSAMLGLATLSRFDGDLDKASQLLDRVLVLEPTS 647

Query: 359 EIFLLLAQIEQANSHNTD 376
               L+A + +   H   
Sbjct: 648 ----LVALVSRGQLHEQA 661


>gi|239606806|gb|EEQ83793.1| DnaJ domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 765

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 19/186 (10%)

Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+  +  L          A   +  ML+          +          G+   A R+ 
Sbjct: 413 RLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDPDALLIRG--RLFYAQGENEQAIRHF 470

Query: 178 TKALDISPDAPWVT------EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225
             AL++ PD+          + +++          A+++  AI    +  +   +     
Sbjct: 471 KLALNLDPDSTQAVRYLRMVQKLLRMKDEGNAAFKARKYQEAIDVYTKALEVDPKNKDIN 530

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + LL  R+    +  +   +  D  ++LKL  + + A    AK+  +     +A    +K
Sbjct: 531 SKLLQNRAQAYLNLSNYDKAIEDCTDALKLDPSYVKAQRVRAKAYGASGNWEEAAREFKK 590

Query: 286 IWKVNP 291
           I + NP
Sbjct: 591 IAEANP 596


>gi|332084569|gb|EGI89763.1| cellulose synthase operon protein C [Shigella boydii 5216-82]
          Length = 1157

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHNQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARTAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNTSLNTQPRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 19/162 (11%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARTAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQ-RYAT------KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                  GD  +A+ + A        +L+  P                 + + A    N+
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNTSLNTQPRVALA-------QAQLGDTAAAQQTFNK 696

Query: 214 --KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
              +  +   +   A++L   +   A  GD   +     +++
Sbjct: 697 LIPQAKSHPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|160872774|ref|ZP_02062906.1| methyltransferase domain family [Rickettsiella grylli]
 gi|159121573|gb|EDP46911.1| methyltransferase domain family [Rickettsiella grylli]
          Length = 581

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 83/240 (34%), Gaps = 23/240 (9%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + ++G+   A++     L I P       A+       ++W  AI ++ +      +  R
Sbjct: 28  AQKLGNFTDAKKRYEHILSIQPTHAEAMHALGILASELQQWETAILWIQRALAIQPDSAR 87

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 +  +    +   +  +      +L    +   A    A      N+ + A    
Sbjct: 88  ----FHLHLANGFKNTNQLKCALTHYQAALFFDPHYAEAHNNLAGLFYKNNQLKMAYQHC 143

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           ++  K+ P     H  +  I+     +     + +  +L +++  S+++   ++ +  E 
Sbjct: 144 QQAIKLKPNYLEAHINLGLIFLAQHKKEAA--ILQFKQLLKLHPHSIQAHWQLAALYWEE 201

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-----LLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            +++  H      + + P     L     L+ + E     N    +++ + AL    DP 
Sbjct: 202 ENLENVHYHYQKILALDPYSVELLNNFAALMLKKE-----NVAAAIHYFKRAL--ALDPQ 254



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 98/240 (40%), Gaps = 15/240 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A     +  A ++ E +L I  T   A+++L   +  +    +A  +  +AL I PD+  
Sbjct: 28  AQKLGNFTDAKKRYEHILSIQPTHAEAMHALGILASELQQWETAILWIQRALAIQPDS-- 85

Query: 190 VTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A    ++    + +  +       + A  ++ + A      +        +  +Y  
Sbjct: 86  ---ARFHLHLANGFKNTNQLKCALTHYQAALFFDPHYAEAHNNLAGLFYKNNQLKMAYQH 142

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLL 303
             +++KL  N + A I      ++Q+KK  A +  +++ K++PH      ++A +Y    
Sbjct: 143 CQQAIKLKPNYLEAHINLGLIFLAQHKKEAAILQFKQLLKLHPHSIQAHWQLAALY---W 199

Query: 304 SENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            E  +  +     ++  ++  SVE L   + + L+  ++  A      A+ + P+ +I  
Sbjct: 200 EEENLENVHYHYQKILALDPYSVELLNNFAALMLKKENVAAAIHYFKRALALDPQHKIAR 259


>gi|327351273|gb|EGE80130.1| hypothetical protein BDDG_03071 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 765

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 19/186 (10%)

Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+  +  L          A   +  ML+          +          G+   A R+ 
Sbjct: 413 RLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDPDALLIRG--RLFYAQGENEQAIRHF 470

Query: 178 TKALDISPDAPWVT------EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225
             AL++ PD+          + +++          A+++  AI    +  +   +     
Sbjct: 471 KLALNLDPDSTQAVRYLRMVQKLLRMKDEGNAAFKARKYQEAIDVYTKALEVDPKNKDIN 530

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + LL  R+    +  +   +  D  ++LKL  + + A    AK+  +     +A    +K
Sbjct: 531 SKLLQNRAQAYLNLSNYDKAIEDCTDALKLDPSYVKAQRVRAKAYGASGNWEEAAREFKK 590

Query: 286 IWKVNP 291
           I + NP
Sbjct: 591 IAEANP 596


>gi|228984698|ref|ZP_04144870.1| hypothetical protein bthur0001_13990 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774896|gb|EEM23290.1| hypothetical protein bthur0001_13990 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 434

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 241 --QELKELDSEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|150395286|ref|YP_001325753.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
 gi|150026801|gb|ABR58918.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
          Length = 1198

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 76/256 (29%), Gaps = 21/256 (8%)

Query: 80  NYDKGYKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
               G  A +     +    +IP A  +     +Q    +  L      Q+A+     + 
Sbjct: 334 RDASGRYAGMAQAWTAGFREDIPAAIAVIKRAERQ-YPDDPTLPAA-RAQLAMLLDDRDE 391

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSAQRYATKALDISPDAPWVTE 192
             + +E  L I      A+     E+          DL  A     +AL  +P +  +  
Sbjct: 392 LRDGVERALSIDPEDPTAL-----EARAHYRYHIDNDLEGALSDLNRALQTAPGSSSIWN 446

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+        +   A        K A   +    +     +++  D+  M  +  +   +
Sbjct: 447 ALGLVQGARGDNRAA----EAAFKQAIALDPLDPVSHANLAIQYLDEMRMAEAKREIDTA 502

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           L +  +  +A +   +  +      +A   L      NP    A +           ++ 
Sbjct: 503 LSVDPSFDVALVARGRYQMQNGDVDRAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIP 562

Query: 313 RALRL---EEINKESV 325
            A  L   + ++    
Sbjct: 563 AAQALDNADRLDPNDP 578


>gi|94971143|ref|YP_593191.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94553193|gb|ABF43117.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 769

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             A++Y  KAL ++PDA     A+     +  +++ A     +  + A +     A  L+
Sbjct: 556 ELAEKYGQKALQLAPDAADTHLAIGSIAAIKYDYNTAAREFRRATELAPDSG--YASDLL 613

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           + +L      D I +   A ++L+L  +   A     ++LI+Q +  +A    E++ +++
Sbjct: 614 SWALSYQIPPDPIGAEAAARKALRLQASIYPAYYHLGRALIAQGRYSEALESFEQMRRLS 673

Query: 291 P 291
           P
Sbjct: 674 P 674



 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 53/169 (31%), Gaps = 9/169 (5%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMM 146
           L  G ++   ++   A +     + +    + Y   LL              A       
Sbjct: 577 LAIGSIAAIKYDYNTAAREFRRAT-ELAPDSGYASDLLSWALSYQIPPDPIGAEAAARKA 635

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L++ A+   A Y L       G  + A     +   +SP +        Q Y+   E+ +
Sbjct: 636 LRLQASIYPAYYHLGRALIAQGRYSEALESFEQMRRLSPTSNTAGLGFGQVYIAQGEYDK 695

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           AI  L +       + +   I     +   A KGD   +     ++  L
Sbjct: 696 AIEVLLK-------YPQANTINYYWLAAAYAAKGDNAKALATIQKAFDL 737


>gi|46581167|ref|YP_011975.1| TPR/GGDEF domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450588|gb|AAS97235.1| TPR/GGDEF domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 891

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 21/194 (10%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            ++  A    E  LQ       A+Y+L      +G+   A++   K L  +P   +    
Sbjct: 705 GRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVR 764

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + Q     K +++A  + N+  +          ++    +  +  +G    +     ++L
Sbjct: 765 LGQLAEGEKRYAQARQYFNKAARAGDSG----GLVHRNLARLSMRQGRPDEAREHLHDAL 820

Query: 254 KLCDNSIMASICAAKSLISQNK--------KRKAEVI---LEKIWKVNPHPEIANIYTHL 302
                  +A    A+  +   +         R++  +   L++ W      E+A      
Sbjct: 821 LRNPQDAVALQLMARLYLDGGEDPAMAEALSRQSVALRPDLKQGWL-----ELARA-LDA 874

Query: 303 LSENTVGKLKRALR 316
                  +  R   
Sbjct: 875 RGHVAEAREARLRA 888



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 8/197 (4%)

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKGYK--ALYT-GLMSIAAHNIPLARKMHSYVSQQHT 115
             V    L           +    K     ALY  G +  +      ARK +    +   
Sbjct: 697 LGVCMAGLGRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAP 756

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
            H   LV L   Q+A  E++Y  A +      +   +      +L   S R G  + A+ 
Sbjct: 757 GHVFALVRL--GQLAEGEKRYAQARQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEARE 814

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +   AL  +P      + + + Y+   E   A+     ++  A   +  +  L +AR+L+
Sbjct: 815 HLHDALLRNPQDAVALQLMARLYLDGGE-DPAMAEALSRQSVALRPDLKQGWLELARALD 873

Query: 236 NADKGDMIASYHDAIES 252
              +G +  +    + +
Sbjct: 874 --ARGHVAEAREARLRA 888



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 41/226 (18%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A      AL           ++            A  +  Q  +          +
Sbjct: 671 GDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKP----GDPM 726

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L          G+   +     + LK     + A +   +   ++ +KR A+       
Sbjct: 727 ALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQL--AEGEKRYAQ------- 777

Query: 288 KVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                   A  Y +    + ++ G + R                 ++++++  G  D+A 
Sbjct: 778 --------ARQYFNKAARAGDSGGLVHR----------------NLARLSMRQGRPDEAR 813

Query: 346 AKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMP 390
                A+   P+  + L L+A++   +      +         A+ 
Sbjct: 814 EHLHDALLRNPQDAVALQLMARL-YLDGGEDPAMAEALSRQSVALR 858


>gi|189463811|ref|ZP_03012596.1| hypothetical protein BACINT_00144 [Bacteroides intestinalis DSM
           17393]
 gi|189438761|gb|EDV07746.1| hypothetical protein BACINT_00144 [Bacteroides intestinalis DSM
           17393]
          Length = 340

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 90/233 (38%), Gaps = 14/233 (6%)

Query: 130 ALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
           A    + + A +       + +   T  +    L     +   L+ A     +     PD
Sbjct: 60  AQRMGRPDYAIKCFTEALALQEDFETMSY----LSQVYIQTNALSEAHELLERMAKQEPD 115

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +     L +++ +A+    QK    +E N   A  L+ R+ +  D G  I S 
Sbjct: 116 HTSTFLTLANVCYLQEDY-QAMADAAQKAIEIEEGNAM-AHYLLGRAKQGMDDG--IMSI 171

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               +++ L D+   A +  A++LI   + ++A   ++ I   +P  E A +    + E 
Sbjct: 172 AHLTKAIVLKDDFTEARLLRAEALIKMQQYKEATEDIDAILSQDPDEEAALLLRGKVKET 231

Query: 307 TVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           T  + +       + E+N  + ++ + + ++ +      +A A    A+++ P
Sbjct: 232 TGQQEEAETDYRYVTELNPFNEQAFLCLGQLYIVQKKYPEAIALFDEAIELNP 284


>gi|328874364|gb|EGG22729.1| hypothetical protein DFA_04859 [Dictyostelium fasciculatum]
          Length = 541

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 83/253 (32%), Gaps = 32/253 (12%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +   A+K+          +   L  L  L V+        + A +  E ++++       
Sbjct: 184 DYATAKKLLEQAVALDKDYLPALGSLGDLHVKT----GTLDRALKYYERVVELQPHNLNG 239

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L   + + G  +SA +   + + +                 +  ++  +     + K
Sbjct: 240 LLGLGHVALKQGSTDSAVKLYQRVVRLG-----------ASQAESLNYATGVDTNLMRLK 288

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            + E+N   +  +   +  +   G    +      ++K+   S+ A    A   +   + 
Sbjct: 289 KSAEYNPIYSASIC-LANIHERHGRFDNALEAINTAIKIHPGSVYAHSICASIHLRNKEP 347

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVG--KLKRALRLEEI---------NKESV 325
            KA   ++   +V+P+ E A     + ++  +   + K ++ L              + V
Sbjct: 348 LKAIDTIDSALRVDPNNEFAKT---IRADALMDMNRFKESIGLYREVIANIMERDRPDEV 404

Query: 326 ESLVIVSKIALEM 338
            + + +    +  
Sbjct: 405 NTRIAILHNMIAA 417



 Score = 43.4 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 75/233 (32%), Gaps = 29/233 (12%)

Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  ++      G    +    ++A++  P  P         Y   +++ +AI        
Sbjct: 104 LLHQASALVDQGSTEESISLLSEAIESCPADPRAYGLRADLYEHTRQYQQAI-------- 155

Query: 217 NAKEWNRNRAIL------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              ++ +   +L      L + +   A   D   +     +++ L  + + A        
Sbjct: 156 --PDYRKVVELLPESIPALSSLADCYASLDDYATAKKLLEQAVALDKDYLPALGSLGDLH 213

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
           +      +A    E++ ++ PH     +   +  L   +T   +K   R+  +     ES
Sbjct: 214 VKTGTLDRALKYYERVVELQPHNLNGLLGLGHVALKQGSTDSAVKLYQRVVRLGASQAES 273

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
                 +    G +D    +   + +  P     + LA I + +    + +  
Sbjct: 274 ------LNYATG-VDTNLMRLKKSAEYNPIYSASICLANIHERHGRFDNALEA 319


>gi|229577290|ref|NP_001153341.1| O-glycosyltransferase [Nasonia vitripennis]
          Length = 1061

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 121 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 178

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       G++  A  +  K
Sbjct: 179 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 230

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 231 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 286

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      +++L  N   A    A +L  + +  +AE       ++ P H +  N 
Sbjct: 287 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNN 346

Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++  E        +L     LE    E   +   ++ +  + G +++A      A++I
Sbjct: 347 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 404

Query: 355 APR 357
            P 
Sbjct: 405 QPT 407



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 256 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 315

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +         A  L   +    ++G +  +    +++L++ 
Sbjct: 316 ALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKREQGYIEEATRLYLKALEVF 371

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 372 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDVQGAL 429

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 430 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 475



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 321 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 377

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 378 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 437

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 438 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 487


>gi|197120668|ref|YP_002132619.1| hypothetical protein AnaeK_0248 [Anaeromyxobacter sp. K]
 gi|196170517|gb|ACG71490.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
          Length = 1256

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 98/306 (32%), Gaps = 18/306 (5%)

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
               +      R   +    L   L +    ++   R                   L   
Sbjct: 307 LEQRVKAARGPRAEAEARLELARVLAARQGGDVQERRAAAEARRAALLAPGWVEAQL--- 363

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           + A  E  +    +++E  L +      A+ +L  E    G   +A R   +A+  +P  
Sbjct: 364 EAAALEEDHGRRRQRIEAALAVAPEDPRALRALGQEELDQGRPQAAARLLERAVRAAPGW 423

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                 + +    A     A   L  +   +       A+   ARS     + +  ++  
Sbjct: 424 AAPRVELAEALSRAG--LEARGALLAEATASAFATVPSAVRAAARSARRLGRTEEASARS 481

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
             + +L+  D    A++  A+ L  +     A  +LE+  +++P    +++Y  L   + 
Sbjct: 482 RTLVALRFDDAQTRAAL--AQILADRGDVAGARALLEEALRLDP----SDVYQRLRLGDL 535

Query: 308 VGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +    R             +  +  ++     +  L  G +  A A    A+++ P+   
Sbjct: 536 LAASGRGEEAERAYAAALALAPDEPDAWERRGRARLSQGRVKDAQADLQRALELRPQSPE 595

Query: 361 FLLLAQ 366
             LL +
Sbjct: 596 LKLLVR 601


>gi|94734310|emb|CAK04778.1| novel protein [Danio rerio]
          Length = 706

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 113/365 (30%), Gaps = 49/365 (13%)

Query: 27  DVSITWGNRLYRTSPFVILSILYFFLF----AWILLFAVSR-FFLSCPAMLFHMLHKRN- 80
            V   WG      S  V+L +  +        W+   A+ R    + P       +  N 
Sbjct: 370 SVVSRWGAAALTVSMLVVLLLFSWKTVQQNEIWLSREALFRSGIQTLPHNAKVHYNYANF 429

Query: 81  -YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYN 137
             DKG                  A   +    + +  H   L  L  L  Q         
Sbjct: 430 LKDKGRN--------------QEAIYHYKTALRLYPRHASALNNLGTLTHQA-------E 468

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A       L I      A+++L       G    A+R   +++   P       ++   
Sbjct: 469 EAEVYYRRALDINPQHNRALFNLGNLLKSQGKEEEAERMLKESIRFGPHFADAYSSLASL 528

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y        A     +  +N  E +     L     +   D G    +     E+++L  
Sbjct: 529 YADQGHSKEANEIYTKGIENCPESSD----LHNNYGVFLVDTGRGDRAAFHYQEAVRLKP 584

Query: 258 NSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
              +A +   + L S N         ++A  ++ K+  + P   +  +Y +    E  + 
Sbjct: 585 AHYVAMVNLGRLLRSSNDNKEAELWYKRALQVVRKVDILTP---LGALYYNTGRYEEALE 641

Query: 310 KLKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
             + A  L     +S +  + +++ +A+   S++       +  K +   E + LL+ I 
Sbjct: 642 VYREASTL---QPDSTDIWLALAQVLAMAGRSMEAEKMTLGIISKTSNCIECYRLLSAIY 698

Query: 369 QANSH 373
               +
Sbjct: 699 SKQGN 703


>gi|120555274|ref|YP_959625.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
 gi|120325123|gb|ABM19438.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
          Length = 585

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 65/225 (28%), Gaps = 26/225 (11%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             +    G+       A  A  + P      + ++  Y                 K+   
Sbjct: 150 MEQIMDQGEDADFDSLAAMAAGLPPAQ---QQELLALYSQ------------LAVKHPDN 194

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                +I L+ +       G    +     + L+   N   A I     L    +KR+A 
Sbjct: 195 PELQYSIALLQK-----ITGTPTVALRQINQLLEQAPNFQPAIILKGDLLYQTGQKREAL 249

Query: 281 VILEKIWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
             L    +  P   ++  +Y    +             RL +   E+    +  + +ALE
Sbjct: 250 NYLTTNTRRFPANRQMGTLYGRMLINEGELQAAQDEFERLVKRYPETPGLRLSHALVALE 309

Query: 338 MGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQANSHNTDKILY 380
                 A  +    ++      +  + L  +IE+   +    I +
Sbjct: 310 NQQPALAREELTRLIEQGHHEDEASYYL-GRIEEDAGNTDQAIEH 353



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 39/272 (14%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L   L+++      LAR+  + + +Q    +E   YL   +I       + A E  + + 
Sbjct: 301 LSHALVALENQQPALAREELTRLIEQGHHEDEASYYL--GRIEEDAGNTDQAIEHYQSVQ 358

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVV--------- 195
           +          +   ++   G+L+ A  +     + +PD     W+ E  +         
Sbjct: 359 RGNYFFPSLARASELQAQA-GELDQAIAHIQNLRERAPDHAEKFWLLEVNLLIDQERNEQ 417

Query: 196 ---------QQYVLAKEWSRAITFL----------NQKKKNAKEWNRNRAILLIARSLEN 236
                    ++Y    E   A   L           Q  K   E     A+ L A     
Sbjct: 418 ALAAADAALERYPNNVELRYARAMLQDTMGEPAGAEQDLKTILELQPENAVALNALGYIL 477

Query: 237 ADKGDM-IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             + D    +     ++L L   +          L  Q +  +A   L + W+  P PE+
Sbjct: 478 TVRTDRLDEARGYIEKALALDPENPAILDSMGWILFRQGETNQALDFLARAWEAYPDPEV 537

Query: 296 ANIYTH---LLSENTVGKLKRALRLEEINKES 324
           A  Y     +       ++     L + N   
Sbjct: 538 AAHYGEVLWVTGNEEQARIIWEEGL-DQNPNH 568


>gi|242279894|ref|YP_002992023.1| hypothetical protein Desal_2428 [Desulfovibrio salexigens DSM 2638]
 gi|242122788|gb|ACS80484.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 794

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 90/244 (36%), Gaps = 9/244 (3%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
             +   + L  QI L E + N+A  +   +++       A   L       G+ N A   
Sbjct: 368 PKDAEAHYLRGQIYLLEGRGNLAVSEFRQVVRDNPESAPAYVLLARAHLVNGETNIAIEN 427

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A+++ P      E ++  Y+  K+W +AI  L + ++   +       +L A     
Sbjct: 428 LKEAINLEPGYAPAREVLINTYLDRKDWHQAILELQRLREKRPD----DIQILAAIGDVY 483

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           + KGD   +     E  +   +S +  +  A+   S  K   AE+      KV P   +A
Sbjct: 484 SIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARSLGKNSLAEMHYTAALKVAPD-SLA 542

Query: 297 NIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            I       +L            RL +   ++     ++ K+    G+ + A      A+
Sbjct: 543 AIQGKVDIFILQHKYTAATNFCERLLQKFPDNARIYELLGKVHAAWGNFEDAETNYSRAV 602

Query: 353 KIAP 356
            +AP
Sbjct: 603 TLAP 606



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 102/313 (32%), Gaps = 54/313 (17%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            N   A ++ + V   H    E    +L  ++  +++++    + L+  L   A+     
Sbjct: 243 GNDTKAAELMAEVVHNH--PEEAEYRVLYSRVLNSQKKFVETEKVLKEGLTYQASSLAVR 300

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW------SRAITFL 211
            SL       G    A R     + + P+    ++ VV +  LA  +      ++AI  L
Sbjct: 301 SSLAGLYMAQGRQEEAIRVLLDGVALDPEGTESSDYVVYRKQLATMYLDMNEPNKAIEQL 360

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +    +  E N   A     R      +G    +  +  + ++    S  A +  A++ +
Sbjct: 361 D----SVIELNPKDAEAHYLRGQIYLLEGRGNLAVSEFRQVVRDNPESAPAYVLLARAHL 416

Query: 272 SQNKKRKAEVILEKIWKVNP--HPE---IANIYTHLLS------ENTVGKLKR------- 313
              +   A   L++   + P   P    + N Y           E    + KR       
Sbjct: 417 VNGETNIAIENLKEAINLEPGYAPAREVLINTYLDRKDWHQAILELQRLREKRPDDIQIL 476

Query: 314 -------------------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                                 L E   +S    + ++++A  +G    A      A+K+
Sbjct: 477 AAIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARSLGKNSLAEMHYTAALKV 536

Query: 355 APRKEIFLLLAQI 367
           AP       LA I
Sbjct: 537 APDS-----LAAI 544



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 71/204 (34%), Gaps = 7/204 (3%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G+   A      A D++P +      + + Y+LA+E+  A     +      + + 
Sbjct: 69  ALENGNFQGAFVNFRYASDLAPASVEAKVELSKLYLLAREYDDAGDTARKAL--NLDASN 126

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L++  +   A+      +      +L     +    +  +   I Q    KAE  L
Sbjct: 127 IEARLVL--ASVLAESRKFSEAQKMLEIALNEDPGNPDVYLSMSSVFIRQGNMEKAEDAL 184

Query: 284 EKIWKVNPH--PEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
               K  P     +  +   +  +++    LK   +L + +     + V  ++    MG+
Sbjct: 185 LDGLKRLPQNTSLLMKVVAFYRKNDDPDTALKYVEKLLQSSDADPRTKVFAAEFYSTMGN 244

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLL 364
             +A       +   P +  + +L
Sbjct: 245 DTKAAELMAEVVHNHPEEAEYRVL 268



 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 53/148 (35%), Gaps = 6/148 (4%)

Query: 112 QQHTFHNEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           Q+        + +L     +   +   N+A      + +           L   +  +G 
Sbjct: 463 QRLREKRPDDIQILAAIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARSLGK 522

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A+ + T AL ++PD+    +  V  ++L  +++ A  F  +  +   +  R   +L 
Sbjct: 523 NSLAEMHYTAALKVAPDSLAAIQGKVDIFILQHKYTAATNFCERLLQKFPDNARIYELL- 581

Query: 230 IARSLENADKGDMIASYHDAIESLKLCD 257
                 +A  G+   +  +   ++ L  
Sbjct: 582 ---GKVHAAWGNFEDAETNYSRAVTLAP 606


>gi|284039246|ref|YP_003389176.1| hypothetical protein Slin_4396 [Spirosoma linguale DSM 74]
 gi|283818539|gb|ADB40377.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 602

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 92/275 (33%), Gaps = 26/275 (9%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATR 153
           + +  +  A    +        +      LL  ++ + +++Y  A +  E +L+  P   
Sbjct: 113 LKSGKVTEALPFAAKAHALDVDNK--FYSLLLAELYVKQKRYGEAEDLYEALLKKGPENA 170

Query: 154 EFAV----YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           E+ V      L+ E       + A     K          +T    + Y+   +  +AI 
Sbjct: 171 EYGVELAAIYLFNEK-----PDKALEAYNKVERELGLNEEITRQKQRIYLKQNKIEKAIE 225

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               K   ++  + +    L+  +           +      +LKL  +   A +  A  
Sbjct: 226 EAE-KLVASEPSDPDY---LLEGAELLIANDRPDQAIGWIDRALKLSTDLPQAHVLLADI 281

Query: 270 LISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTV---GKLKRALRLEEI 320
              +    +    L ++   NP+ E      I + Y  +   NT      L  A  L + 
Sbjct: 282 YRKKGDMDRVSKELNQV-LANPNLEAGLKARILSSYMGMTGSNTAAQQDALAMAQNLAKT 340

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +    ++ V+++ + ++ G   +A      A ++ 
Sbjct: 341 SPNDPKTQVMLADLLMQQGKKAEARDTYAKAARLD 375



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 79/254 (31%), Gaps = 40/254 (15%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            L   + + A  +   +LQ       A YS      + G +  A  +A KA  +  D  +
Sbjct: 78  YLMTDEPSKAITQFAKVLQKDPNNAAAQYSTASAYLKSGKVTEALPFAAKAHALDVDNKF 137

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
            +  + + YV  K +  A        K   E N    + L A  L N      + +Y+  
Sbjct: 138 YSLLLAELYVKQKRYGEAEDLYEALLKKGPE-NAEYGVELAAIYLFNEKPDKALEAYNKV 196

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
              L L +     +    +  + QNK  KA   +E+                        
Sbjct: 197 ERELGLNEE---ITRQKQRIYLKQNKIEKA---IEEA----------------------- 227

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQ 366
                 +L        + L+  +++ +     DQA     +A+      P+  +  LLA 
Sbjct: 228 -----EKLVASEPSDPDYLLEGAELLIANDRPDQAIGWIDRALKLSTDLPQAHV--LLAD 280

Query: 367 IEQANSHNTDKILY 380
           I +           
Sbjct: 281 IYRKKGDMDRVSKE 294


>gi|163783159|ref|ZP_02178153.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881493|gb|EDP75003.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 341

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 18/218 (8%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYAT------KALDISPDAPWVTEAVVQQYVL 200
            +   T+E     LY           A+ Y+       +A  I+P  P +  A+   Y+ 
Sbjct: 18  AKQEQTKESEWRHLYDLGMSA---YYARNYSEAIARLYRAAKIAPKEPLIWNALGMTYME 74

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +E+ +A     +   +      ++  L I   L   D    I    +A+         I
Sbjct: 75  VEEYKKAEEAFKRALASNPNHAESKMNLGILY-LRMKDYRRAIKFLQEALSDETFDKKHI 133

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRAL 315
            A    A+       ++K    L+K    NP       E+ + Y          +L    
Sbjct: 134 -AFYYLARVYRELGDRKKYLEYLKKATAYNPMFLDAQLELGSAYMDDKRYEEAERL--YK 190

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            L   N ++ +  + ++K+  E G  ++A     L ++
Sbjct: 191 SLIANNFKTPDIYLSLAKVYYETGDYEKAKETVKLVLE 228


>gi|322783907|gb|EFZ11098.1| hypothetical protein SINV_13115 [Solenopsis invicta]
          Length = 393

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 34/200 (17%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224
            GD+ +A+   + A   +P++  +  A V+      E+ RA   L + + +A        
Sbjct: 72  AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMK 131

Query: 225 ------------RAILLIARSLENADK---------------GDMIASYHDAIESLKLCD 257
                        A+ L+  +LE  D                G +  +     +++K C 
Sbjct: 132 SAKLEWALNNLDAALHLLKEALEAFDDFPKLWLMKGQIEEQQGYLDKAIDTYNQAIKKCP 191

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR--AL 315
           +SI      A+    +N+  KA  +LEK    N  P+ A ++   +         R  A 
Sbjct: 192 HSIPLWRLLARLEHKKNQVTKARSVLEKARLKN--PKNAELWLEAIRNELKNGGARDMAN 249

Query: 316 RLEEIN-KESVESLVIVSKI 334
            L     +E   S ++ ++ 
Sbjct: 250 TLMAKALQECPTSGLLWAEA 269


>gi|304415007|ref|ZP_07395801.1| tetratricopeptide repeat-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
 gi|304283093|gb|EFL91512.1| tetratricopeptide repeat-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
          Length = 389

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 93/253 (36%), Gaps = 19/253 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    +M+++        R  A Y L  +    G  + A+    +  D       
Sbjct: 83  GEVDRAIRIHQMLIENTSLTFEQRLLASYQLGRDYMTAGLYDRAESMFIRLTDEHDFCIG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASYHD 248
             + ++  Y   KEW +A+    +  K  KE  R   A      +LE  +  D+  + H 
Sbjct: 143 ALQQLLLIYQAMKEWLKAVEVAEKLIKLGKEEQRIEAAHFYCELALEAMNDDDVNKAQHL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
             ++  +      AS+   +  I+  +  KA   L+++ + +        P +   Y HL
Sbjct: 203 LKKAALVDKKCARASMMLGQVYIANGEWIKAVDSLQRVLQQDKDIVSEVLPLLQGCYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361
              +     K   R  + N  +  + ++++++  +    + A A     ++  P   + +
Sbjct: 263 QQIDNWT--KFLHRCVKKNTGTA-AELMMAELIEQKEGRNVAQAYINKQLQQYPTMRLFY 319

Query: 362 LLL----AQIEQA 370
            L+    A  E+ 
Sbjct: 320 RLMDYHLADAEEG 332



 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     A  M   ++ +H F    L  LL   I  A +++  A E  E +     +    
Sbjct: 120 AGLYDRAESMFIRLTDEHDFCIGALQQLLL--IYQAMKEWLKAVEVAEKLIKLGKEEQRI 177

Query: 153 REFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                Y  L  E+    D+N AQ    KA  +       +  + Q Y+   EW +A+  L
Sbjct: 178 EAAHFYCELALEAMNDDDVNKAQHLLKKAALVDKKCARASMMLGQVYIANGEWIKAVDSL 237

Query: 212 NQKKKNAKE 220
            +  +  K+
Sbjct: 238 QRVLQQDKD 246


>gi|283781318|ref|YP_003372073.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283439771|gb|ADB18213.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
          Length = 829

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 17/226 (7%)

Query: 141 EKLEMMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-V 195
              E M      +      A  +L       G    +   A   L  +PD P     + +
Sbjct: 446 HSYEAMWTDATAKAPQNLRAERALMVWLASSGRALESVDRARSLLAKNPDMPERHLNLAI 505

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             ++  +    A   +  K    +  N   A  ++  + +    G    +     +SL++
Sbjct: 506 ALHLNNE---PAEAEVQAKLAIDQLPNSEDAFYILGCAYDKL--GKKREAETAFRKSLEI 560

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGK 310
               + A+      L ++ K       LE+  K++P H     ++A  Y  L  + T   
Sbjct: 561 LPTFVDANHTLGHLLAAEGKVSDGAEFLERAVKIHPLHEGALQDLAVAYDLL--DRTEES 618

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                RL ++N +   +    + +   +G +D+A A+    ++  P
Sbjct: 619 EATFRRLLKVNPQHRVARDSYALLLQRLGRLDEAVAQYEYLVEQDP 664



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 7/195 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           ++G    A+    K+L+I P        +        + S    FL +  K         
Sbjct: 543 KLGKKREAETAFRKSLEILPTFVDANHTLGHLLAAEGKVSDGAEFLERAVKIHPL--HEG 600

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+  +A + +  D+ +   +    +  LK+     +A    A  L    +  +A    E 
Sbjct: 601 ALQDLAVAYDLLDRTEESEATFRRL--LKVNPQHRVARDSYALLLQRLGRLDEAVAQYEY 658

Query: 286 IWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           + + +P    P +       +  +    ++     E+I   + E    ++++    G   
Sbjct: 659 LVEQDPGDVGPRMNLAIACAMQGDVPRGIELLHEAEQIEPGNAEVQANLAQMLRRAGRDQ 718

Query: 343 QAHAKAMLAMKIAPR 357
            A      A+ I P 
Sbjct: 719 LASTHFRRALAIRPT 733


>gi|37523145|ref|NP_926522.1| hypothetical protein gll3576 [Gloeobacter violaceus PCC 7421]
 gi|35214148|dbj|BAC91517.1| gll3576 [Gloeobacter violaceus PCC 7421]
          Length = 526

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 81/245 (33%), Gaps = 20/245 (8%)

Query: 126 EVQIALA---------ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
             Q A           + +   A  +    L   A    A ++L       G+   A  +
Sbjct: 29  MAQAAELLDLGLVLHRQGRLAEAIVRYGQALDFQADYVEAHFALGLALQARGEGEEAIHH 88

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A+++         A+       +++  A+    +      E+ +    L        
Sbjct: 89  FQRAIELRSYYTDAHFALGTALQEQRDFEGALGCYQRTLAIEPEYVKAHNNL----GAVQ 144

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            + G++  +      +L L  + + A       L  + +  +A +  ++ +++   P+ A
Sbjct: 145 RELGNLDDAIASYRRALALEPDYLEAHNNLGVVLRERGQLEEAALCFKRAFQLQ--PDFA 202

Query: 297 NIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             Y +L       +     +        I  + VE+ V ++      G  D A  +   A
Sbjct: 203 EAYYNLGLLLHSQQKLAEAISVYRTALIIKGDLVEARVNLAHALQASGQGDAAIEEHRRA 262

Query: 352 MKIAP 356
           +++AP
Sbjct: 263 VELAP 267


>gi|85091330|ref|XP_958849.1| hypothetical protein NCU04606 [Neurospora crassa OR74A]
 gi|28920237|gb|EAA29613.1| hypothetical protein NCU04606 [Neurospora crassa OR74A]
 gi|28950046|emb|CAD70801.1| probable pre-mRNA splicing factor prp1 [Neurospora crassa]
          Length = 917

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 35/264 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E      ++ A+    +A   +PD+  +  A V+         +A   L   ++NA 
Sbjct: 592 LAREKAAEAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARELLKTARQNAP 651

Query: 220 E---------WNRNR-----AILLIARSLEN---------------ADKGDMIASYHDAI 250
                     + R +     A+ L+ ++L+                 D G +  +     
Sbjct: 652 TDRVWMRSVAFERQQGVNEAALDLVQQALQLFPSKPKLWMMKGQIYEDLGQLGPAREAYS 711

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309
             ++   +SI   +  ++     N   KA  +L++  +  P  PE+      +  E   G
Sbjct: 712 TGVRAVPSSIPLWLLYSRLEEKANNVVKARSVLDRARQAVPKSPELWTELIRV--ERRAG 769

Query: 310 KLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-I 367
            L +A  L     +   +S ++ ++  L +    Q  +    A+K      I L+ A  I
Sbjct: 770 NLNQAKSLMAQALQQMPKSGLLWAERILNLEPRTQRKSLLAEAVKKVEDDPILLVTAARI 829

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
             A     D+   W + AL    D
Sbjct: 830 LWAERK-LDRAQNWFEKALLLDRD 852



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 82/235 (34%), Gaps = 14/235 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             S       +A+     A+ + P++  +  A +               L +  +    +
Sbjct: 526 RASINRDKFATARAIYAYAIRVFPNSKSLYTAAIDLERNHGSKEDLWHALEKAVEACPHY 585

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                +  +  + E A +  +  +      + K   +S    + A K         KA  
Sbjct: 586 E----VFWLMLAREKAAEAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARE 641

Query: 282 ILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +L+   +  P        +A      ++E  +  +++AL+L        +  ++  +I  
Sbjct: 642 LLKTARQNAPTDRVWMRSVAFERQQGVNEAALDLVQQALQLF---PSKPKLWMMKGQIYE 698

Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++G +  A       ++  P    ++LL +++E+  ++N  K       A  A+P
Sbjct: 699 DLGQLGPAREAYSTGVRAVPSSIPLWLLYSRLEEK-ANNVVKARSVLDRARQAVP 752


>gi|330506685|ref|YP_004383113.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328927493|gb|AEB67295.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 705

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 67/252 (26%), Gaps = 14/252 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGD 169
                        +   +    + +   A    E  + + P+ R      L    C  G+
Sbjct: 445 RALDIEPQNPDALMGLAEALHQKGRLEEARSYYEAAIAEEPSVR--GYRGLGNILCAQGE 502

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              +      AL   P                   S A+   N+      E     +   
Sbjct: 503 YGQSIPLFESALSQEPSDTESLMGKGLALAATGNSSGALQCFNEIVSLNPE----DSAAW 558

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             R    A  G    +     ++  +  +S        +     ++  ++    E   ++
Sbjct: 559 SNRGSIFAALGRYDEARESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSRQAFENATRL 618

Query: 290 NPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +  P+   ++  L      +      LK   R   ++ ++  +   ++      G   +A
Sbjct: 619 S--PDDPVLWLELGLAQERTGEAKLALKSLQRAVVLDPKNEFAQYSLALALAGQGRFQEA 676

Query: 345 HAKAMLAMKIAP 356
                  ++I P
Sbjct: 677 LQAFERVLEINP 688



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 86/279 (30%), Gaps = 47/279 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            Q + A E    +L+       +   L        D +S+ +   +AL I+P        
Sbjct: 230 GQVDRAEEDYYTVLEKNPEDFESWRGLGMVRYATEDYSSSLQAFDQALKINPHDIQTILG 289

Query: 194 VVQQYVLAKEWSRAITF------------------------LNQKKKNAKEWNRNRAI-- 227
                +    +S A+                          L ++K+  K + R   +  
Sbjct: 290 KGDLLLARGNFSSALESYSAALLLKKDNVSALYGKGLALSSLGREKEANKCYRRILELEP 349

Query: 228 ----LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                L   + +  ++ + I +       L     +  A +  AK+ +      +A    
Sbjct: 350 DNIIALQKIADDLLERNESIQAAEHYGLILGQDPKNARALLGMAKAQLDLGDLDQALQSY 409

Query: 284 E----------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           E            W       I      LL  N    ++   R  +I  ++ ++L+ +++
Sbjct: 410 EELLGHDSNSSAAW-------IGRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAE 462

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              + G +++A +    A+   P    +  L  I  A  
Sbjct: 463 ALHQKGRLEEARSYYEAAIAEEPSVRGYRGLGNILCAQG 501



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 75/217 (34%), Gaps = 12/217 (5%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +GY+ L  G +  A      +  +      Q     E L+   +     A    + A + 
Sbjct: 488 RGYRGL--GNILCAQGEYGQSIPLFESALSQEPSDTESLMG--KGLALAATGNSSGALQC 543

Query: 143 LEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                 L    +  ++     F +   G  + A+    KA  IS  +  +   + Q Y L
Sbjct: 544 FNEIVSLNPEDSAAWSNRGSIFAAL--GRYDEARESLQKAAGISSSSADIWYNLGQVYRL 601

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
               +++        + + +      +L +   L     G+   +      ++ L   + 
Sbjct: 602 MDRHNQSRQAFENATRLSPD----DPVLWLELGLAQERTGEAKLALKSLQRAVVLDPKNE 657

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            A    A +L  Q + ++A    E++ ++NP  ++A 
Sbjct: 658 FAQYSLALALAGQGRFQEALQAFERVLEINPKNDLAK 694


>gi|94311190|ref|YP_584400.1| cellulose synthase operon C-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355042|gb|ABF09131.1| cellulose synthase subunit C [Cupriavidus metallidurans CH34]
          Length = 1267

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 12/172 (6%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            + +   +++ A   L        E  +     L+  +      GD   +   A + L  
Sbjct: 709 DRRIAEGDFNGARDTLYA----VPEAQQRDRRWLLELADLREAHGDFKGAADAARQVLAT 764

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVG 309
             +   A +  A+      +  +A  I+  +    P  +I      A  +T L  E+   
Sbjct: 765 DPHDASAQLTLARQYERMGRTDEALDIVRTVLAEAPEDDIDTRLSVARRFTALRREDEAD 824

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            +     L+       +  V   +IA   G  + A      A+ +  R+ + 
Sbjct: 825 AV--VDALDARFPNRADITVQRGRIAQSRGDYNDAAEIYRTALGLEQRESVL 874



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 118/389 (30%), Gaps = 70/389 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
           D  Y+A   GL  +    +  A        Q+     E +  L  V+  L E +++ A E
Sbjct: 285 DPAYQARQRGLAQLERGQLSEADIALQKAYQKRRNDAEVVGGLGLVR--LREGRHDEARE 342

Query: 142 KL-EMMLQIPATR---------EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                    P+ +          + V S   ++ + G    A+  A KAL   P      
Sbjct: 343 LFARAQQLDPSNKWRSLMATATFWGVISKARDANKQGKPAEAEALARKALAQQPGNDSAE 402

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIAS----- 245
             +    +   + + A   L +       +    R+++ + +      + D + +     
Sbjct: 403 GILADALIAQNKDAEAEALLRKMLARPKPDMGALRSLVELLQKEHRDAEIDPLIASVEPR 462

Query: 246 ---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                  + +++    S+      A+ L++Q K+  A   LE   ++ P           
Sbjct: 463 MKGSESEMRAMRADLLSV-----RAERLLAQQKRSPAIANLEASVRLQP--------DDA 509

Query: 303 LSENTVGKLKRALRLEEI----------NKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +  T+ +L R L L  +             + E     +     +  ID A        
Sbjct: 510 WTRFTLARLYRDLGLPALGRTVMDDGLKAAPTSEMRYATALYLNSVDDIDAATTVLAAVP 569

Query: 353 KIAPRKEI-----------FLLLAQIEQANSHNTDKILYWTQSA-LHAMPDPL------- 393
                + +            L  A++  A  H+ +        A   A  DP        
Sbjct: 570 DAERSEGMRNLGHNLAAQRLLREARLRVAEGHDDE-ARALLHQAEQEAQNDPHMLASIGR 628

Query: 394 -WISDDG-----YLSSVWLPLSPISKTLC 416
            WI+        +L S WL   P    L 
Sbjct: 629 EWIALGEPETGLHLVSDWLAAHPEDPHLD 657


>gi|323495046|ref|ZP_08100135.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546]
 gi|323310703|gb|EGA63878.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546]
          Length = 389

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 51/287 (17%)

Query: 98  HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +       + +      +  +A    + A +  E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGFLDRAEKIFEQLVDEPDHREA 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +V  Y   +EWS+AI + +   
Sbjct: 143 AL----------------------------------QQLVAIYQQTREWSKAINYASLLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  ++  R          +++   +G+   +  +   +L      + ASI   K  +   
Sbjct: 169 KMGRKRMRTSIGHFWCELAMQEKAEGNHAQAMQNFKRALAEDPKCVRASIALGKLYLDNE 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
             R     +E +      +     P +A  Y HL  E+ +    R   +      S E  
Sbjct: 229 DYRSTIKYMEMVLDQDSDFVSEVLPTLAECYHHLGQEDELLNFLR-QCIVNKAGVSAE-- 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370
           ++++++  +   +  A       +   P     + L+    A+ E+ 
Sbjct: 286 LMLAQLVAQHDGVGAAQELLTRQLVKNPTMKGFYRLMDYHLAEAEEG 332


>gi|289209659|ref|YP_003461725.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
           K90mix]
 gi|288945290|gb|ADC72989.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
           K90mix]
          Length = 935

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 90/296 (30%), Gaps = 14/296 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
            N   A ++              + Y L  Q+ + + +   A   L E + + P   E  
Sbjct: 326 GNWSQAERL--LERHHALGPANAMSYRLLAQLRIEQGRTQEARRILAEALSERPDLIEAL 383

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L       GD +S      +AL    D P + E +    V   +  + +  L++   
Sbjct: 384 GDQLAALYIGEGDTDSGIEVLREALANRADRPELQEMLGIALVRHGDHEQGMALLHRVAS 443

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            + +      +   + +L +        +             +         +L+   + 
Sbjct: 444 ESADVR----LADYSVALAHIRDEQYEQALEATQRLRDKDPENPQGFNLMGAALLGLGEI 499

Query: 277 RKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +A +I ++   +  HP+     +      +   N     +    L+E +     S + +
Sbjct: 500 HEARLIYQEGLSL--HPDNSTLALNLSSLEVRQGNLETAREILEDLQERDPGHPTSAIRL 557

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           + +  + G ++        A++  P +    L+    Q    +        + A  
Sbjct: 558 ATLHFQQGEMEAGKRWLQDAIEAHPDRIEPYLMLARAQNQQEDHAAARSTLEKARE 613



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 19/237 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATRE 154
           A  +  AR++   V ++          ++  Q        +   A E  E  L   + R+
Sbjct: 700 AGEVDEARQVFEPVVERA----PEAAQVIAQQAWFDAQAGELEKAIEGYERALGRESRRD 755

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           + V   Y    R G   +A       L   P+       +    + A   + A+      
Sbjct: 756 WLVEK-YQAQQRAGHSEAALETLKGWLQEHPEDAASRHLLGSAQINAGHEAEALDTYETV 814

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +      R   ++ +  +   A + D   +   A  +++L  +           L+   
Sbjct: 815 LE-----QRPNDVIALNNAAWLARETDNPRAREYARRAVELAPDQPAILDTLGVVLLEGG 869

Query: 275 KKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVE 326
               A   L++ ++++P  P+    +A  Y    S  T         L E +++  E
Sbjct: 870 DTESALETLQRAYRMSPQAPDIGFHLAQAYQA--SGETEQARALLTELLEAHEDFPE 924



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 88/275 (32%), Gaps = 23/275 (8%)

Query: 89  YTGLMSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
              L ++        A +    +   H      L   L         + + A +  E ++
Sbjct: 660 ARNLAALGETEQAVTALRQTLSIDSSHMSARMVLTRHLS-----LAGEVDEARQVFEPVV 714

Query: 148 QI-PATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +  P   +     +  ++    + G+L  A     +AL       W+ E   Q    A  
Sbjct: 715 ERAPEAAQV----IAQQAWFDAQAGELEKAIEGYERALGRESRRDWLVE-KYQAQQRAGH 769

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A+  L    +   E   +R +L  A+     + G    +       L+   N ++A 
Sbjct: 770 SEAALETLKGWLQEHPEDAASRHLLGSAQ----INAGHEAEALDTYETVLEQRPNDVIAL 825

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGKLKRALRLEEI 320
             AA      +  R A     +  ++ P  P I +      L   +T   L+   R   +
Sbjct: 826 NNAAWLARETDNPR-AREYARRAVELAPDQPAILDTLGVVLLEGGDTESALETLQRAYRM 884

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + ++ +    +++     G  +QA A     ++  
Sbjct: 885 SPQAPDIGFHLAQAYQASGETEQARALLTELLEAH 919



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 101/343 (29%), Gaps = 47/343 (13%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLE 144
           AL    + +   N+  AR++   + ++   H    + L  L  Q    E       + +E
Sbjct: 520 ALNLSSLEVRQGNLETAREILEDLQERDPGHPTSAIRLATLHFQQGEMEAGKRWLQDAIE 579

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
                          L     +  D  +A+    KA +  P+   V   +V       ++
Sbjct: 580 AHPDRIEPYLM----LARAQNQQEDHAAARSTLEKAREHHPNDTRVLGLLVDLQEREGDF 635

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A   L     +      + A L   ++   A  G+   +     ++L +  + + A +
Sbjct: 636 AGAAQTLG----HLAVLRPDAAELRFRQARNLAALGETEQAVTALRQTLSIDSSHMSARM 691

Query: 265 CAAKSLISQNKKRKAEVILE---------------KIWKVNPHPEIANIY----THLLSE 305
              + L    +  +A  + E               + W      E+          L  E
Sbjct: 692 VLTRHLSLAGEVDEARQVFEPVVERAPEAAQVIAQQAWFDAQAGELEKAIEGYERALGRE 751

Query: 306 NTVGKL--------------KRALRLEEINKESVE---SLVIVSKIALEMGSIDQAHAKA 348
           +    L                   L+   +E  E   S  ++    +  G   +A    
Sbjct: 752 SRRDWLVEKYQAQQRAGHSEAALETLKGWLQEHPEDAASRHLLGSAQINAGHEAEALDTY 811

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              ++  P   I L  A      + +  +   + + A+   PD
Sbjct: 812 ETVLEQRPNDVIALNNAAWLARET-DNPRAREYARRAVELAPD 853



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 24/271 (8%)

Query: 131 LAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS--P 185
           +   +Y  A  +    LQ    P  R      L +   R      A R+  +AL++   P
Sbjct: 52  MDAGEYAAATIEYRNALQHNADPEIR--GRLGLAY--LRDQQPEPAVRHLQRALEMGADP 107

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           +   +  A +  + L    S AI  +        ++  R    LL  RSL     GD  A
Sbjct: 108 NVYALPLARL-LFTLGG--SGAIAEIPEADALEGEDAAR----LLAYRSLAAYQAGDASA 160

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299
                  + ++ D+ +   +      +S     +A  + +   + +  PE +  +     
Sbjct: 161 GSDYLEAAREVQDDLVEIQLARGYQAMSDGDAEQAMNMTDAALETD--PEFSPAWSLKGD 218

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
              +  +    LK   R  E+  +++   +    + +E+   D+A A        AP   
Sbjct: 219 LERVQGDPEAALKAFSRAVELRPDAIAERLKRGLMHVELEQFDEARADGKFLKDGAPNHP 278

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               L  + +  +    +     + AL A  
Sbjct: 279 GGHFLLGLIEFETGEPLQARPHLEEALAASA 309



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 44/373 (11%), Positives = 92/373 (24%), Gaps = 85/373 (22%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
            +GY+A+          +   A  M     +     +      L+  +   +     A +
Sbjct: 181 ARGYQAMSD-------GDAEQAMNMTDAALETDPEFSPAWS--LKGDLERVQGDPEAALK 231

Query: 142 KLEMMLQI--PATREFAVYSLY-------FESCRI------------------------- 167
                +++   A  E     L         E+                            
Sbjct: 232 AFSRAVELRPDAIAERLKRGLMHVELEQFDEARADGKFLKDGAPNHPGGHFLLGLIEFET 291

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+   A+ +  +AL  S +       +    +    WS+A   L +            A+
Sbjct: 292 GEPLQARPHLEEALAASANYRLAMPYLAAIQLEEGNWSQAERLLERHHALGPA----NAM 347

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKI 286
                +    ++G    +     E+L    + I A     A   I +        +L + 
Sbjct: 348 SYRLLAQLRIEQGRTQEARRILAEALSERPDLIEALGDQLAALYIGEGDTDSGIEVLREA 407

Query: 287 WKVNP-HPEIAN------------------------------------IYTHLLSENTVG 309
                  PE+                                         H+  E    
Sbjct: 408 LANRADRPELQEMLGIALVRHGDHEQGMALLHRVASESADVRLADYSVALAHIRDEQYEQ 467

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            L+   RL + + E+ +   ++    L +G I +A       + + P      L     +
Sbjct: 468 ALEATQRLRDKDPENPQGFNLMGAALLGLGEIHEARLIYQEGLSLHPDNSTLALNLSSLE 527

Query: 370 ANSHNTDKILYWT 382
               N +      
Sbjct: 528 VRQGNLETAREIL 540



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 91/330 (27%), Gaps = 45/330 (13%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREF 155
             +   ++      + H    E   YL+  +    +  +  A   LE   +     TR  
Sbjct: 565 GEMEAGKRWLQDAIEAHPDRIEP--YLMLARAQNQQEDHAAARSTLEKAREHHPNDTRVL 622

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +  L     R GD   A +       + PDA  +     +      E  +A+T L Q  
Sbjct: 623 GL--LVDLQEREGDFAGAAQTLGHLAVLRPDAAELRFRQARNLAALGETEQAVTALRQTL 680

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                    R +L    SL     G++  +       ++    +       A       +
Sbjct: 681 SIDSSHMSARMVLTRHLSL----AGEVDEARQVFEPVVERAPEAAQVIAQQAWFDAQAGE 736

Query: 276 KRKAEVILEKIWKVNPHPE-IANIY-THLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
             KA    E+        + +   Y     + ++   L+      + + E   S  ++  
Sbjct: 737 LEKAIEGYERALGRESRRDWLVEKYQAQQRAGHSEAALETLKGWLQEHPEDAASRHLLGS 796

Query: 334 IALEMG---------------------------------SIDQAHAKAMLAMKIAPRKEI 360
             +  G                                    +A   A  A+++AP +  
Sbjct: 797 AQINAGHEAEALDTYETVLEQRPNDVIALNNAAWLARETDNPRAREYARRAVELAPDQPA 856

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            L    +      +T+  L   Q A    P
Sbjct: 857 ILDTLGVVLLEGGDTESALETLQRAYRMSP 886


>gi|290475309|ref|YP_003468197.1| hypothetical protein XBJ1_2298 [Xenorhabdus bovienii SS-2004]
 gi|289174630|emb|CBJ81424.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
          Length = 389

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 101/316 (31%), Gaps = 49/316 (15%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +++        R  A+  L  +    G  + A+    + +D +     
Sbjct: 83  GEVERAIRIHQSLMESASLTFEQRLLAIQQLGRDYMAAGVYDRAENMFIQLVDEADFCEN 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIAS--- 245
              +++  Y    +W++AI    +  K  K   R   A      +L+         +   
Sbjct: 143 AFNSLLSIYQSTSDWNKAIDVSEKLVKLGKHHFREEIAHFYCELALQYMGSDASTEAVGY 202

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
            + A ++ K C      SI   +  I+Q +  KA  +L++         I      L+SE
Sbjct: 203 LNKAAQADKNCAR---VSIMFGRIYIAQKEYTKAAELLKR---------ILEQDKQLVSE 250

Query: 306 NTVGKLKRALRLEEINKESVESLV---------IVSKIALE-----MGSIDQAHAKAMLA 351
           +     +    L +   E  E+ V          ++++ L          D A       
Sbjct: 251 SLPMLEECYQNLSQ--PEEWEAFVQCCVEEKCGAIAELYLADIIEKKEGRDIAQNYINRQ 308

Query: 352 MKIAPRKEI-FLLL----AQIEQANSHNTDKILYWTQSALHAMP-DPLWISD-DGYLSSV 404
           ++  P   + + L+    A  E+  +  +  +L         +   P +     G+ S  
Sbjct: 309 LERHPTMRLFYRLMDYHLADAEEGRAKESLLLLR--NMVGEQIRTKPDYRCHKCGFTSRS 366

Query: 405 --WLPLSPISKTLCYF 418
             W    P  ++    
Sbjct: 367 LYWH--CPSCRSWDTI 380


>gi|147774593|emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
          Length = 1023

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 17/242 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + +   E L+ +L+      P      +     E    GD+ +A+    +A   
Sbjct: 654 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 711

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P++  +  A  +      E  RA   L + ++            ++ R L     G+  
Sbjct: 712 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVEREL-----GNTG 766

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTH 301
                  E LKL  +     +   +         KA+   +   K  P   P +    +H
Sbjct: 767 EERRLLGEGLKLFPSFFKLWLMLGQLEERFGNFEKAKEAYDSGLKHCPSCIP-LWLSLSH 825

Query: 302 LLSE-NTVGKLKRALRLEE-INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           L  + N + K +  L +    N ++ E  +   +     G+  +A      A++  P   
Sbjct: 826 LEEKMNGLSKXRAVLTMARKKNPQNPELWLAAVRAESRHGNKKEADILMAKALQECPTSG 885

Query: 360 IF 361
           I 
Sbjct: 886 IL 887


>gi|218672595|ref|ZP_03522264.1| TPR repeat-containing protein [Rhizobium etli GR56]
          Length = 374

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 80/246 (32%), Gaps = 11/246 (4%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAV 157
           P A       ++Q    +  L  +   ++A          E ++  L           A 
Sbjct: 95  PRAAIEIIKKAEQRYPDDPTLPAV-RAELAELTDDREQMKEAIDRSLSLDPDHPMALSAR 153

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
               + +    DL+ A     +A+ ++P A     ++            A     +  K 
Sbjct: 154 AG--YRATYESDLDGALADLNRAIALAPGASGTLNSLGLLQSSR----DANGEAEKAFKK 207

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A E +    +L    ++   D+  M  + H+   ++ L  +  +A +   +  +   ++ 
Sbjct: 208 AIELDPQDPLLHANLAILYLDQARMKEAKHEIDTAIALDPSFDLALLARGRYYLQAGERD 267

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIAL 336
           KA   L      NP    +             +L     L+  N+ +  + ++   + A+
Sbjct: 268 KALADLLAASTANPAHSQSQFMLAAAHYEKGDRLPSEQALDNANRLDDDDPVISSFRTAI 327

Query: 337 EMGSID 342
           ++   D
Sbjct: 328 DIDDYD 333


>gi|254422478|ref|ZP_05036196.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196189967|gb|EDX84931.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 408

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 74/255 (29%), Gaps = 16/255 (6%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +  +  A +    ++ I      A   L     R+ + + A+    +A+ I+P 
Sbjct: 159 AHSLFMDEAFEQAADTYRELIDISPREADAYIGLGGALLRLEEYDDARSAYERAVAIAPG 218

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                EA+   Y+    +  A++ L + +      + NRA +    +     + +   ++
Sbjct: 219 NAQAYEAIGLLYLTQGNYDAALSPLERARS----IDTNRASVHANLARIWLAQDNDSQAF 274

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LL 303
                ++ L      +     + L  +     A    E+  + NP    A        L 
Sbjct: 275 DSLQRAVALNPRDSDSQYFLGEILRKRGDINSALNHYEQAVEHNPRLLQAQAALGELLLE 334

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            +  +  +    +L     E       +       GS + A  +          +    L
Sbjct: 335 RQQYLRAVLAYRQLTRAFPEDAGVRYNLGLALWGQGSKNSALEEL---------QRSLQL 385

Query: 364 LAQIEQANSHNTDKI 378
               E     +    
Sbjct: 386 YRDQENGEGADRAAA 400


>gi|78223606|ref|YP_385353.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
 gi|78194861|gb|ABB32628.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
          Length = 267

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 66/196 (33%), Gaps = 11/196 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD   A     + ++  PD       + +      +   A+    +  K A +     
Sbjct: 17  EAGDYTGAAAQFRECVEREPDNAEGYFYLGEALSEEGKLQDALKEYEKGLKLAPD----D 72

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              L A      + G    +       + L  ++  A +       S  + +KA    EK
Sbjct: 73  LDALTAVGDIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNSLERTQKAIKAFEK 132

Query: 286 IWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             +++P        + + +  L        +    +  E++ +   +   + ++  ++G 
Sbjct: 133 ALEIDPANVFAYNGLGDAWYGLDEHEKA--IAAFQKGIELDPDDAAAHFNLGELYYDLGE 190

Query: 341 IDQAHAKAMLAMKIAP 356
            D+A  + + A+++ P
Sbjct: 191 HDEAEHECLEAVRLDP 206



 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 75/232 (32%), Gaps = 23/232 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              Y  A  +    ++         + L       G L  A +   K L ++PD      
Sbjct: 18  AGDYTGAAAQFRECVEREPDNAEGYFYLGEALSEEGKLQDALKEYEKGLKLAPDDLDALT 77

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           AV        ++  A+    +    A + + + A + I     + ++         AI++
Sbjct: 78  AVGDIKFELGQYKEALAAYQRVV--ALDPDNSDAHVNIGLVYNSLERT------QKAIKA 129

Query: 253 LKLCDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLL 303
            +       A++ A      +    ++  KA    +K  +++P     H  +  +Y  L 
Sbjct: 130 FEKALEIDPANVFAYNGLGDAWYGLDEHEKAIAAFQKGIELDPDDAAAHFNLGELYYDLG 189

Query: 304 SENTVGKLKRALRLEEINKESVE--SLVIVSKIALEMGSIDQAHAKAMLAMK 353
             +          LE +  +     S + +  + ++   +  A     L ++
Sbjct: 190 EHDEAEH----ECLEAVRLDPAFSMSYLTLGSLYMDNERVKDAIRYLELYLR 237


>gi|148264105|ref|YP_001230811.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146397605|gb|ABQ26238.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 573

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 15/169 (8%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           + +VL  ++  A++ L        E +   A L  + +           +      ++KL
Sbjct: 54  RIHVLEGDFDGALSLLQAAV----EADPKSAFLRKSIAQVYLQMNRFQDALESCQTAIKL 109

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HPEIANIYTHLLSENTV 308
               + A I A   L+   + ++A    +K  +++P       H  +A  Y  +      
Sbjct: 110 DPGFVEAQILAGNILVGLQRDKEAIPYYKKALEIDPSKEDIYLH--LAIAY--VKGFEYE 165

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +     L ++N +S      + K   +M     A      A+++ P 
Sbjct: 166 EAVNTLKVLLKVNPDSAIGYYYLGKTYDQMKLSKDAANYYKKAVELKPD 214


>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
 gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
          Length = 125

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 34/87 (39%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               +  Y+ A E  +  L++      A Y+L     + GD + A  Y  KAL++ P+  
Sbjct: 18  AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKK 215
                +   Y    ++  AI +  +  
Sbjct: 78  EAWYNLGNAYYKQGDYDEAIEYYQKAL 104



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A + +    +    + E    L        +  Y+ A E  +  L++      A 
Sbjct: 23  GDYDEAIEYYQKALELDPNNAEAWYNL--GNAYYKQGDYDEAIEYYQKALELDPNNAEAW 80

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           Y+L     + GD + A  Y  KAL++ P+     + +
Sbjct: 81  YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNL 117


>gi|149636068|ref|XP_001507659.1| PREDICTED: similar to PRP6 pre-mRNA splicing factor 6 homolog
           (yeast) [Ornithorhynchus anatinus]
          Length = 1026

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 102/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 664 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 721

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 722 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 781

Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++ +                  +  +     + LK C +S    +  ++     
Sbjct: 782 LCEEALKHYEDFPKLWMMKGQIEEQEELIEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 841

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P++      L     +  +  A  L     +E   S ++ 
Sbjct: 842 GQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 899

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 900 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 957

Query: 391 D 391
           D
Sbjct: 958 D 958



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 373 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 429

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 430 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 481

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 482 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 534

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 535 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 580


>gi|282164280|ref|YP_003356665.1| hypothetical protein MCP_1610 [Methanocella paludicola SANAE]
 gi|282156594|dbj|BAI61682.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 388

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 84/252 (33%), Gaps = 24/252 (9%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
             +  + +    +  L     + A                 R F +  +   +      +
Sbjct: 135 LPDHAVAHFKLAEAWLMTGNGDEASRELERAARFAPDDLDIRFF-LRHI---ARFNKAPD 190

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
              + A  A++ + +     + +    ++  +       + +  K A +    R  L +A
Sbjct: 191 EVLKDARMAVEKNANDAGAHDRLGTLLLMMDDMKSGRAEVERAVKLAPDKEEYR--LDLA 248

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +L +  +G   A+  +   +L+L    + A +          +   A     +  K+ P
Sbjct: 249 YALSSFYEG---AALREVKAALRLAPRWLEAWLFLGAFYADLRRLGDAINAYRQALKIYP 305

Query: 292 -----HPEIANIYTHLLSENTVGKLKRAL--RLEEINKESVESLVIVSKIALEMGSIDQA 344
                H  + + Y    +     +  R       E+N ++ E+  +++ + L  G  D+A
Sbjct: 306 DNDLLHYLLGDAYFKAFN----ARNARIEMETAVELNPDNYEARRVLAGLYLVQGLKDKA 361

Query: 345 HAKAMLAMKIAP 356
             +  + +++ P
Sbjct: 362 IEQYEVLVEMEP 373


>gi|313680127|ref|YP_004057866.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313152842|gb|ADR36693.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 364

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 83/206 (40%), Gaps = 16/206 (7%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L ++    G+L+ A+    +AL I+PD   V   + Q Y+   +   A+  L Q    
Sbjct: 155 RGLVYQYK--GELDKAEAAFKQALAIAPDDAVVRYNLAQVYLSQGKLDEALDMLAQ---- 208

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               +   A L +      A KG ++ +     ++ +L   +    +   +    + K  
Sbjct: 209 GVALDPASAQLQLLYGKVLAVKGRLVEAEQALAKATELAPLNASTWLNLGQVYYLEKKFA 268

Query: 278 KAEVILEKIWKVNP--HPE----IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVI 330
           +A   L+K  +++P   PE    +   +      ++    L +A++L     ++ +    
Sbjct: 269 EAIDTLDKAIELDPLGFPEAYFYLGRSHLEAGHVDDARLNLTKAIKLA---PDNADYHYW 325

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           +++  +  G  D A  +   A+++AP
Sbjct: 326 LARALIAAGENDAARTELERALELAP 351



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/312 (16%), Positives = 106/312 (33%), Gaps = 62/312 (19%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YLL   +  +  +Y+ A       L+      +A+Y L     ++    +A     +A+
Sbjct: 38  AYLLVGDVYYSSGEYDAAMIAFRRALEKEPNNVYALYGLGRTQLKMHQFTAAIENLKRAI 97

Query: 182 DI----SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSL 234
            I    +P    + +A   +Y+ A++ + A  FL+Q      +          +   R L
Sbjct: 98  AIDGSYAPLYVALAQAYTDRYLYAEDKTAAEKFLDQALLILDDARTIDPNYHAIYNQRGL 157

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP- 293
               KG++  +     ++L +  +  +     A+  +SQ K  +A  +L +   ++P   
Sbjct: 158 VYQYKGELDKAEAAFKQALAIAPDDAVVRYNLAQVYLSQGKLDEALDMLAQGVALDPASA 217

Query: 294 EIANIYTHLLS-----ENTVGKLKRALRLEEINKES------------------------ 324
           ++  +Y  +L+           L +A  L  +N  +                        
Sbjct: 218 QLQLLYGKVLAVKGRLVEAEQALAKATELAPLNASTWLNLGQVYYLEKKFAEAIDTLDKA 277

Query: 325 --------VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
                    E+   + +  LE G +D A      A+K+AP                 +  
Sbjct: 278 IELDPLGFPEAYFYLGRSHLEAGHVDDARLNLTKAIKLAP-----------------DNA 320

Query: 377 KILYWTQSALHA 388
              YW   AL A
Sbjct: 321 DYHYWLARALIA 332


>gi|83313118|ref|YP_423382.1| methyltransferase [Magnetospirillum magneticum AMB-1]
 gi|82947959|dbj|BAE52823.1| Predicted methyltransferase [Magnetospirillum magneticum AMB-1]
          Length = 540

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 90/269 (33%), Gaps = 6/269 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A  +     A      +++       A Y L   +   G    A  + T+A+   P
Sbjct: 16  RAMAAWDDGNAAEARRLARSIVESKPDFGGAHYLLGLIALAQGQARRAAEHLTQAVAADP 75

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +      A+ +       ++ AI  L+ +   ++E +   A   +A  L    +     +
Sbjct: 76  NQSVPRLALGRALEALDNYNSAI--LHYRAILSREPDHAEANARLAELLGRLGRNK-AEA 132

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
              A  ++K+      A       L       +A  +LE+  ++ P   +A     L+  
Sbjct: 133 LEHARRAVKVAPRHPEALCTLGTLLHQTGDHAEAARMLERSLEIRPDWAVALNNYGLVLG 192

Query: 306 NTVGKLKRALRL---EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +     +    L    E+ ++   +   ++     MG +D+A   A  A KI  R     
Sbjct: 193 SLGQYERAVAVLSGAAELRRDHAGTRANLAAALRGMGRLDEARLHAERATKINSRDMAGW 252

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPD 391
           L   + +      +      + A+ A PD
Sbjct: 253 LELGLVRKALGMPEAAAAAFERAVTAAPD 281



 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 88/274 (32%), Gaps = 12/274 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+++A      A +  +         N+ +  L   +   A   YN A      +L   
Sbjct: 51  GLIALAQGQARRAAEHLTQAVAAD--PNQSVPRLALGRALEALDNYNSAILHYRAILSRE 108

Query: 151 ATREFAVYSLYFESCRIGDLNS-AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                A   L     R+G   + A  +A +A+ ++P  P     +        + + A  
Sbjct: 109 PDHAEANARLAELLGRLGRNKAEALEHARRAVKVAPRHPEALCTLGTLLHQTGDHAEAAR 168

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +  +   +W    A+ L    L     G    +      + +L  +        A +
Sbjct: 169 MLERSLEIRPDW----AVALNNYGLVLGSLGQYERAVAVLSGAAELRRDHAGTRANLAAA 224

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI----YTHLLSENTVGKLKRALRLEEINKESV 325
           L    +  +A +  E+  K+N   ++A                       R      +SV
Sbjct: 225 LRGMGRLDEARLHAERATKIN-SRDMAGWLELGLVRKALGMPEAAAAAFERAVTAAPDSV 283

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +   +++  L +G  ++A       +++ P   
Sbjct: 284 HAHYCLAEARLVLGEKNRAAKSFRRCLELDPEDR 317



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 63/169 (37%), Gaps = 8/169 (4%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R++   D G+   +   A   ++   +   A        ++Q + R+A   L +   
Sbjct: 13  AFGRAMAAWDDGNAAEARRLARSIVESKPDFGGAHYLLGLIALAQGQARRAAEHLTQAVA 72

Query: 289 VNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG-SIDQA 344
            +P+   P +A        +N    +     +     +  E+   ++++   +G +  +A
Sbjct: 73  ADPNQSVPRLALGRALEALDNYNSAILHYRAILSREPDHAEANARLAELLGRLGRNKAEA 132

Query: 345 HAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              A  A+K+APR  + +  L   +    + +  +     + +L   PD
Sbjct: 133 LEHARRAVKVAPRHPEALCTLGTLL--HQTGDHAEAARMLERSLEIRPD 179


>gi|94266280|ref|ZP_01289985.1| TPR repeat:Response regulator receiver [delta proteobacterium
           MLMS-1]
 gi|93453131|gb|EAT03602.1| TPR repeat:Response regulator receiver [delta proteobacterium
           MLMS-1]
          Length = 393

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 63/205 (30%), Gaps = 11/205 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A    E  +Q       + ++L   + +  + + A  Y  +A++ISP        
Sbjct: 193 GDIAKAQSCFEKAIQRNRLDVTSYHALGQIAFKRNNTDKAISYFARAMEISPRHTDRALQ 252

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +  +   +   A   L    ++      N        + +    G    +     E +
Sbjct: 253 FAKLLLKKNQTQEAEKVLKLVLRHK----VNDIDFKEQVAEQALAGGLYTLAVKALREVV 308

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTV 308
           K        +     +L+   +  +   +LE      P       E+A  Y  +      
Sbjct: 309 KADPERSYLNKKIGTALVQVGEYNEGTRLLETAAAKTPQDVELLLELARAYMAMRMPIRA 368

Query: 309 GKLKRALRLEEINKESVESLVIVSK 333
              K A  +  I+ E+ E+  I+ +
Sbjct: 369 D--KWAATVIRIDPENAEAREILKE 391


>gi|218202567|gb|EEC84994.1| hypothetical protein OsI_32276 [Oryza sativa Indica Group]
          Length = 1173

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 25/233 (10%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKK 216
                ++ +  D  +A++      + S       EA++       + + A    L  K  
Sbjct: 3   RG-ASQAQQRKDAEAAEQLDRLMREASSPRKEAREALLLDRSRRHDEAIARVDELAAKHP 61

Query: 217 NAKEWNRNRAILL---IARSLENAD----KGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            +        +L     +R++   D    +     +    I++ +L  N +  ++  A +
Sbjct: 62  ESAAVAHLAGLLHYHATSRAMAAKDRQGVEAHCNTARDFYIKAKRLAPNCVEIAVRLALA 121

Query: 270 LISQNKKRKAEVILEKIWKVNPHP-EIAN---IYTHLLS-ENTVGKLKRALRLEEINKES 324
            +      +AE  +E+     P P + A     Y + L   ++  ++++A R+    +  
Sbjct: 122 RLRCFNDGEAEPEIERA-LAIPFPTDPAENNVAYDNALGTTSSRDRVEKARRVALARRPE 180

Query: 325 VESLVIV------SKIALEMGSIDQAHAKAMLAMKIA---PR-KEIFLLLAQI 367
           + S V         +  L+    D        A ++A   P      L+ A I
Sbjct: 181 ILSYVRNRSIPGDVRAVLDYADSDGVAKAVKPAKEVALRYPYSARAHLIYAYI 233


>gi|154343499|ref|XP_001567695.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134065027|emb|CAM43139.1| conserved hypothetical protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 2412

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 77/239 (32%), Gaps = 11/239 (4%)

Query: 161  YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--- 217
            Y E C   D  S +  + + +           A++ +      ++ A     + +K+   
Sbjct: 1105 YLERCAAEDAESHREASARVVTAFMRGAAARSALLSRAETMSSYNDARAMQEKDEKHVAM 1164

Query: 218  -AKEWNRNRAILLIAR-----SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
               + N        A      + E A+   +  +   A E+        + +   A    
Sbjct: 1165 TTDDDNGEDTYAASAEVPGQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERA 1224

Query: 272  SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
              ++ R+AE +  +     P   +      +     + +L+RA RL      S     + 
Sbjct: 1225 ELDRLRRAERLASEAPTSAPRRPL-TAEQLVTERAELDRLRRAERLASEAPTSAPRRPLT 1283

Query: 332  SK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
            ++ +A E   +D+      LA +         L A+   A     D++    + A  A 
Sbjct: 1284 AEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAP 1342



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 15/258 (5%)

Query: 132  AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                 +   +      ++P         L  E   +  L  A+R A++A   +P  P   
Sbjct: 1164 MTTDDDNGEDTYAASAEVPGQ-------LAAERAELDRLRRAERLASEAPTSAPRRPLTA 1216

Query: 192  EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            E +  +        RA          A      R +       E A+   +  +   A E
Sbjct: 1217 EQLAAERAELDRLRRAERL----ASEAPTSAPRRPLTAEQLVTERAELDRLRRAERLASE 1272

Query: 252  SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK 310
            +        + +   A      ++ R+AE +  +     P  P  A       +E  + +
Sbjct: 1273 APTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAE--LDR 1330

Query: 311  LKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            L+RA RL      S     + ++ +A E   +D+      LA +         L A+   
Sbjct: 1331 LRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLA 1390

Query: 370  ANSHNTDKILYWTQSALH 387
            A     D++    + A  
Sbjct: 1391 AERAELDRLRRAERLASE 1408



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 72/232 (31%), Gaps = 10/232 (4%)

Query: 91   GLMSIAAHNIPLARKMHSYVS-QQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQ 148
            G ++     +   R+     S    +     L    L  + A  +R         E    
Sbjct: 1183 GQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTS 1242

Query: 149  IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             P     A   L  E   +  L  A+R A++A   +P  P   E +  +        RA 
Sbjct: 1243 APRRPLTAEQ-LVTERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAE 1301

Query: 209  TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                     A      R +     + E A+   +  +   A E+        + +   A 
Sbjct: 1302 RL----ASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAA 1357

Query: 269  SLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEE 319
                 ++ R+AE +  +     P  P  A       +E  + +L+RA RL  
Sbjct: 1358 ERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAE--LDRLRRAERLAS 1407



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 64/203 (31%), Gaps = 14/203 (6%)

Query: 132  AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                 +   +      ++P         L  E   +  L  A+R A++A   +P  P   
Sbjct: 1714 MTTDDDNGEDTYAASAEVPGQ-------LVTERAELDRLRRAERLASEAPTSAPRRPLTA 1766

Query: 192  EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            E +  +        RA          A      R +     + E A+   +  +   A E
Sbjct: 1767 EQLAAERAELDRLRRAERL----ASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASE 1822

Query: 252  SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310
            +        + +   A      ++ R+AE +  +     P  P  A       +E  + +
Sbjct: 1823 APTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAE--LDR 1880

Query: 311  LKRALRLEEINKESVESLVIVSK 333
            L+RA RL      S     + ++
Sbjct: 1881 LRRAERLASEAPTSAPRRPLTAE 1903


>gi|254446689|ref|ZP_05060164.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235]
 gi|198256114|gb|EDY80423.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235]
          Length = 1065

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 92/265 (34%), Gaps = 9/265 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
           I  A+K++  V +      E     L+  IA + + Y+ A   L  ML++      A Y 
Sbjct: 281 IEDAKKLNLEVLKLD--PMEPTALRLKGVIAASSKDYDAAISILTSMLELYPQDVKANYQ 338

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L            A+         +P +      +        ++S AI  L     N  
Sbjct: 339 LALAYIANNQKTKAKAPLEFVGANAPGSIETAILLASLQSEEGDFSGAIITLRNLVANRP 398

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E +  + +L  A + +    G+  A+     E     +++   S  +  + +    + +A
Sbjct: 399 ESSEAKLLLAEAYNRQ----GNYDAALALYEEIDSQAESTPDISYLSGITQLRSRNRDEA 454

Query: 280 EVILEKIWKVNP-HPEIAN--IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
               E   K NP H +         L   +    L+R     ++  ++    VI ++I  
Sbjct: 455 RRAFESALKSNPLHLQSVEQLTALDLSERSYESALQRISDSLQLAPDTSILHVIKAQILN 514

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361
            MG  D+A      A+++     I 
Sbjct: 515 AMGRRDEAEDSFKQAIELDSENRIA 539



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 70/218 (32%), Gaps = 7/218 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +   L SA+    KAL+++P+            +   +   A   L +  +   +    
Sbjct: 173 IKRQALTSAETRLNKALELNPEFGPAYSGKFTIAMSQGQLEAATEALEKAAEYTPKRTGI 232

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           RA      +      G    +            + I  +   A+     N+   A+ +  
Sbjct: 233 RAAYADHIAKRL---GKPDEALAYLEALNDEIPDFIPIATRLAELYAQANRIEDAKKLNL 289

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE---INKESVESLVIVSKIALEMGSI 341
           ++ K++P    A     +++ ++         L     +  + V++   ++   +     
Sbjct: 290 EVLKLDPMEPTALRLKGVIAASSKDYDAAISILTSMLELYPQDVKANYQLALAYIANNQK 349

Query: 342 DQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
            +A A        AP   E  +LLA ++      +  I
Sbjct: 350 TKAKAPLEFVGANAPGSIETAILLASLQSEEGDFSGAI 387



 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 105/280 (37%), Gaps = 17/280 (6%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESC-RIGDLNSAQRYATK 179
             +L   +   E  ++ A   L  +    P + E  +  L  E+  R G+ ++A     +
Sbjct: 369 TAILLASLQSEEGDFSGAIITLRNLVANRPESSEAKL--LLAEAYNRQGNYDAALALYEE 426

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
               +   P ++       + ++    A        K+      +   +    +L+ +++
Sbjct: 427 IDSQAESTPDISYLSGITQLRSRNRDEARRAFESALKSNPL---HLQSVEQLTALDLSER 483

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----PHPE 294
               ++     +SL+L  ++ +  +  A+ L +  ++ +AE   ++  +++      H  
Sbjct: 484 SYE-SALQRISDSLQLAPDTSILHVIKAQILNAMGRRDEAEDSFKQAIELDSENRIAHTL 542

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           ++  Y  L   +    L+    + E N E + +L  ++ +     +  +A       + +
Sbjct: 543 LSRFYLSLNRTDEA--LEHLNIILENNPEDITTLTSLASLYEAERNYKEARESYGKILNL 600

Query: 355 APRKEIFL-LLAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           AP+    L  LA +       TDK L   +SA   A   P
Sbjct: 601 APQNLAALNNLAYLISIEDGPTDKALELAESARKVAPTSP 640



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 4/133 (3%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATK 179
           L  L    +  AER Y  A E    +L +      A+ +L Y  S   G  + A   A  
Sbjct: 574 LTSL--ASLYEAERNYKEARESYGKILNLAPQNLAALNNLAYLISIEDGPTDKALELAES 631

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENAD 238
           A  ++P +P+  + +       KE+ RA   L        +    N  +   + +L   D
Sbjct: 632 ARKVAPTSPFTADTLGWILYQRKEFVRAKALLLDSLSRLTDNAEVNYHVGAASYALGEID 691

Query: 239 KGDMIASYHDAIE 251
                     A E
Sbjct: 692 DAQRTLRVATAGE 704


>gi|197120108|ref|YP_002140535.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197089468|gb|ACH40739.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 1005

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 58/218 (26%), Gaps = 35/218 (16%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                 AE     A      +L           +L       G    A+R   +AL++ P
Sbjct: 540 RANALRAEGDLAGAVALYRCLLARLPACAEIHNNLGLALQDQGLDPEAERSFRRALELKP 599

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D       +    V   E   A+ F  +  +   ++    A + +   L+  ++     +
Sbjct: 600 DLADAQNNLGTLLVARGEHDEALPFFERALELRGDY--LPAYVNLGSCLQVLEE--PERA 655

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                 ++ L      A I                              +   Y  L+  
Sbjct: 656 VELYRRAIALEPGFFKARI-----------------------------NLGTAYQDLMQP 686

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                ++    L E+  E  E+   ++   L +G    
Sbjct: 687 EKA--IETYRELLELAPEHPEAHWNLALSLLSVGDFKW 722



 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 81/224 (36%), Gaps = 21/224 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           AL+E +  +A +    +L+          +  L   + R GDL  A +  ++A  + P++
Sbjct: 10  ALSENRAELAQDICHDLLRAEPENVELLTLVGLL--AYRRGDLEEALQAFSRAAFLQPES 67

Query: 188 PWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             +   V V    L      A+    +      E+   R  L  A        G+   + 
Sbjct: 68  AELRNNVGVAYQDLDCH-DSAVLHFREALSLRGEYPEARCNLATA----LLHLGEAEEAI 122

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
            +  +++        A      +L  Q +   A    +K  +++P    AN+ T +    
Sbjct: 123 RNYCDAIAAAPGYADAYHLLGNALRRQGEWEGAVQCYQKALELDP----ANLKTLVNLGG 178

Query: 307 TVGKLKRA-------LRLEEINKESVESLVIVSKIALEMGSIDQ 343
           ++  L R         R   I+ + V++   ++ + L  G+  +
Sbjct: 179 SLFTLNRFDEAIAAQRRALSIDPDHVDAHWNLALVLLTTGNYQE 222



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 59/203 (29%), Gaps = 42/203 (20%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ----------YNIAH 140
           GL++    ++  A +  S  +             L+ + A               ++ A 
Sbjct: 41  GLLAYRRGDLEEALQAFSRAA------------FLQPESAELRNNVGVAYQDLDCHDSAV 88

Query: 141 EKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTE 192
                          ++   Y E+          +G+   A R    A+  +P       
Sbjct: 89  LHFRE--------ALSLRGEYPEARCNLATALLHLGEAEEAIRNYCDAIAAAPGYADAYH 140

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        EW  A+    +  +   +    + ++ +  SL   ++ D   +      +
Sbjct: 141 LLGNALRRQGEWEGAVQCYQKALE--LDPANLKTLVNLGGSLFTLNRFDEAIAAQ--RRA 196

Query: 253 LKLCDNSIMASICAAKSLISQNK 275
           L +  + + A    A  L++   
Sbjct: 197 LSIDPDHVDAHWNLALVLLTTGN 219


>gi|308499240|ref|XP_003111806.1| CRE-LET-716 protein [Caenorhabditis remanei]
 gi|308239715|gb|EFO83667.1| CRE-LET-716 protein [Caenorhabditis remanei]
          Length = 1758

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 90/240 (37%), Gaps = 33/240 (13%)

Query: 160  LYFESCRIGDLNSAQRYATKALD-ISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQK 214
            L+ E     DL +A++ A +AL+ I+P        +  A +   V   + +       + 
Sbjct: 1510 LFVEK---SDLTAARKTAEEALEAINPTESEELLKMWTAFLNMEVAYGDSTTVEKVFQRA 1566

Query: 215  KKNAKEWNRNRAILLIARSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             KNA  +  ++ +  I +  E NA+   ++        + KL           A+ L++Q
Sbjct: 1567 CKNANAYTIHKTLAKIHQKFEKNAEATQILEQMVKKFRANKLE-----VWTLLAEHLMTQ 1621

Query: 274  NKKRKAEVILEKIWKVNP----HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVE 326
              ++ A  +L +  K  P    H ++ + +  L     +   G+      L   + +  +
Sbjct: 1622 KDQKAARDLLPRALKSAPNAQQHIQLISKFAQLEFKFGDAERGR-TLLEGLVTAHPKKTD 1680

Query: 327  SLVIVSKIALEMGSIDQAHAKAMLAM-------KIAPRKEIFLLLAQIEQANSHNTDKIL 379
              ++ +  AL+   I+ A      A        K+ P  + +L +    ++   +   + 
Sbjct: 1681 LWLVYADAALKHLGIEHARKILERACNLEMSVHKMRPLYKKWLEM----ESKHGDAAAVQ 1736


>gi|224008947|ref|XP_002293432.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970832|gb|EED89168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 734

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 93/280 (33%), Gaps = 29/280 (10%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISP------ 185
           +    +A +  E  +    T   +VY  L      +G++  A+    + L +        
Sbjct: 307 QGNIAVAKQLYEDGVNANCTDASSVYHGLAKLHISLGEIEDARNVLQRGLSLFRPKGNSN 366

Query: 186 ------DAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
                 +  ++   +  ++          A   LNQ   +     R+ + LL+ ++L  +
Sbjct: 367 FVQRNENVAFLAHTLAMIELNCNNNA-KAAKEILNQGLWH----RRSSSPLLLGKALVES 421

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296
             G+   +     +++K   +   A        +     R A+ + E   K  P H  + 
Sbjct: 422 RLGNEYGARDMFEQAIKADPDHAQAWQAFGVMEMRAGNYRSAKTLFECGLKNRPTHGALW 481

Query: 297 NIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             Y  L  E+  G +  A  L         E V      + + L  G +  A      A+
Sbjct: 482 QAYGTL--ESRTGNMSNARLLFAAGIEKCPEHVPLYQAWACLELRDGDVITARRLIGEAL 539

Query: 353 KIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               R    +L+ A+IE+    N   +    +  +   PD
Sbjct: 540 TRDKRNGSGWLVAAKIEEKM-KNHGLVGLILRRGIECAPD 578



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 69/225 (30%), Gaps = 22/225 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+G+   A+    +A+   PD     +A     + A  +  A T      KN        
Sbjct: 422 RLGNEYGARDMFEQAIKADPDHAQAWQAFGVMEMRAGNYRSAKTLFECGLKNRPT----H 477

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L  A     +  G+M  +       ++ C   +      A   +       A  ++ +
Sbjct: 478 GALWQAYGTLESRTGNMSNARLLFAAGIEKCPEHVPLYQAWACLELRDGDVITARRLIGE 537

Query: 286 I----------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
                      W V      A I   + +   VG + R     E   +  E    ++   
Sbjct: 538 ALTRDKRNGSGWLVA-----AKIEEKMKNHGLVGLILRRG--IECAPDDTELYQALADHE 590

Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKIL 379
           +  G ID A       ++I P    ++  LA++E    +      
Sbjct: 591 ISRGKIDSARELLEKGIEINPLHAPLYHSLAELEARVFNLEGLSR 635


>gi|332519513|ref|ZP_08395980.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332045361|gb|EGI81554.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 455

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 87/231 (37%), Gaps = 33/231 (14%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            Y+ A   L+  L+I  +     + L   Y +    G    A +   KA+   PD  W  
Sbjct: 58  NYDKAVVALQKCLEIDDSESILYFELGKNYNKLKNFGAAEDALK---KAVSKDPDNEWYL 114

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----ARSLENADKGDMIASY 246
           + + + Y   K++ +AI  + Q  K   ++  + A + +       +L+  D+ D     
Sbjct: 115 DELYEAYAQQKDYDKAIKTVKQLVKFHPDYKEDLASIYVRTKDYKSALKVLDELDEELGI 174

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLL 303
            D+ + L+             +   +  +K+     LE     NP  E   +A I+ +  
Sbjct: 175 SDSRDRLRN------------QIYNATGRKKAQIRNLEDRVDKNPDAEKNYLALIFRYSE 222

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           + +     + A +L EIN    ES ++     L +        +A  A++ 
Sbjct: 223 NNDKEKAFETAKKLLEINP---ESQLV----HLALYKFYLDDNQAEKAIES 266


>gi|326931987|ref|XP_003212104.1| PREDICTED: pre-mRNA-processing factor 6-like [Meleagris gallopavo]
          Length = 994

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 104/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 632 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 689

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 690 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 749

Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++ +                  +  +     + LK C +SI   +  ++     
Sbjct: 750 LCEEALKHYEDFPKLWMMKGQIEEQKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKV 809

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIV 331
            +  +A  ILEK    N  P+ A+++   +       LK      + +  +E   S ++ 
Sbjct: 810 GQLTRARAILEKSRLKN--PKNADLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 867

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 868 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 925

Query: 391 D 391
           D
Sbjct: 926 D 926



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 341 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 397

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 398 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 449

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 450 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 502

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 503 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 548


>gi|326503324|dbj|BAJ99287.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 941

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 21/227 (9%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A+         +P       A  +    A + ++A   +     +  ++    A 
Sbjct: 284 GDRKKAEMLMENITTTNPSHAPGWIARARLLESAGKLAQARKVI----ADGCKYCPRSAE 339

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           + +  +  N    D   +     +++     S+     AA     + +KR    +  K  
Sbjct: 340 VWLEAARLN---PDPTVAKALLAQAVSHLPESVPLWTAAANLETDRQRKR---RVYRKAL 393

Query: 288 KVNPH-PEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           +  P+ P +      L   E+    LKRA    E    + E  + ++K+     + + A 
Sbjct: 394 EHIPNSPMLWRAAVELEEPEDARVMLKRA---VECVPHNTEMWLALAKL----ETYENAK 446

Query: 346 AKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                A +  P  K I++  AQ+E+A + N   +    + ++  + D
Sbjct: 447 KVLNKARETIPTDKAIWITAAQLEEA-NGNESLVRKVIKKSVKTLAD 492



 Score = 43.4 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 21/276 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG----DLNSAQRYATK 179
           L+  +    +     A       L+  +        +Y  + ++     +   A+    K
Sbjct: 608 LMAAKEKWLQGNIQDARRI----LEEASGSIQGSEQIYLAAVKLEKENDEFERARSLLQK 663

Query: 180 ALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           A   +  A  W+  A++++ + + E  R    L++  +   ++++    L + R   +  
Sbjct: 664 ARKNASTARVWMKSALLEREIGSTE--RERELLDEALQQFNKFDK----LWMMRGQHSER 717

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP-HPEIA 296
            G    +     + L  C NSI   +C ++    Q     KA  +LEK    NP   E+ 
Sbjct: 718 AGRPDEARTTYQQGLAQCKNSIPLWLCLSRLEEKQPGGASKARAVLEKARLTNPKQQELW 777

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM-KIA 355
               H+  EN  G  K A+ L     +   +   +  +A+++ +  Q  A+++ A+ +  
Sbjct: 778 LESIHV--ENRAGNKKMAMTLLAKALQECSTSGKLWALAIDLENTPQKKARSVDALARCG 835

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               + + L ++        +K   W   ++     
Sbjct: 836 HDPFVLVALGKLFWGQRK-IEKARTWFNRSVTEPNG 870


>gi|110760723|ref|XP_623820.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Apis mellifera]
          Length = 1095

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 156 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 213

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       G++  A  +  K
Sbjct: 214 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 265

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 266 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 321

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      +++L  N   A    A +L  + +  +AE       ++ P H +  N 
Sbjct: 322 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNN 381

Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++  E        +L     LE    E   +   ++ +  + G +++A      A++I
Sbjct: 382 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 439

Query: 355 APR 357
            P 
Sbjct: 440 QPT 442



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 356 GQVVEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 412

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 413 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 472

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 473 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 522



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 83/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 291 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 350

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       + A  L   +    ++G +  +    +++L++ 
Sbjct: 351 ALKEKGQVVEAEDCYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 406

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 407 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 464

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 465 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 510


>gi|330993284|ref|ZP_08317220.1| Cellulose synthase 1 operon protein C [Gluconacetobacter sp.
           SXCC-1]
 gi|329759686|gb|EGG76194.1| Cellulose synthase 1 operon protein C [Gluconacetobacter sp.
           SXCC-1]
          Length = 1324

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 89/288 (30%), Gaps = 24/288 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--E 154
              +  A + +  V  +       L+ L   ++ +A+ +   A + L  +    AT+  E
Sbjct: 419 TGQMGAAEQEYQSVLARDPNSQLALMGL--ARVEMAQGKTAEARQLLSRVGSQYATQVGE 476

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             V  L   + +  D         +A+  +P  PWV   +        + + A   +   
Sbjct: 477 IEVTGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDMAEANRVMQPI 536

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS-ICAAKSLIS 272
             N       +A +L      N      + +         L   +   A    A +  I 
Sbjct: 537 LSNPVTAQDRQAGILFTYGSGNDAMTRRLLA--------GLSPEDYSPAIHAIATEMEIK 588

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           Q+   +  ++       NP P I    +    + T  +      L     + + + + + 
Sbjct: 589 QDLASRLSMV------ANPVPLIREALSP--PDPTGARGVAVADLFRQRGDMIHARMALR 640

Query: 333 KIALEMGSI--DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             +     +  DQ  A A   MKI+       LLA +   +       
Sbjct: 641 IASTRTLDLSADQRLAYATEYMKISNPVAAARLLAPLGDGSGTGAGNA 688



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 78/270 (28%), Gaps = 69/270 (25%)

Query: 133 ERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             +   A +  +  LQI            L   S R GD   A+RY  +A+   P     
Sbjct: 305 AGRIAAAEQSFQSALQINSHDADSLGGMGLV--SMRQGDAAEARRYFQEAMAADPKTADR 362

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
               +    ++ +++                      L+ A   + A +     +     
Sbjct: 363 WRPALAGMEISGDYAAVRQ------------------LIAAHQYDAAKQRLSALARQSG- 403

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
                      A++  A    +  +   A    E+ ++                      
Sbjct: 404 -------QFTGATLMLADLQRTTGQMGAA----EQEYQS--------------------- 431

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK----EIFLLLAQ 366
                 L   +  S  +L+ ++++ +  G   +A             +    E+  L+A 
Sbjct: 432 -----VLAR-DPNSQLALMGLARVEMAQGKTAEARQLLSRVGSQYATQVGEIEVTGLMAA 485

Query: 367 IEQANSHNTDKILYWTQSAL-HAMPDPLWI 395
              + + ++ + +   + A+  A  DP W+
Sbjct: 486 --ASQTSDSARKVSILREAMAQAPRDP-WV 512



 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 114/352 (32%), Gaps = 57/352 (16%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           TGLM+ A+     ARK+            +  V +        +     A+  ++ +L  
Sbjct: 480 TGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDMAEANRVMQPILSN 539

Query: 150 PAT---REFAV---YSLYFESCRI--------GDLNSAQR-YATKA-------------- 180
           P T   R+  +   Y    ++            D + A    AT+               
Sbjct: 540 PVTAQDRQAGILFTYGSGNDAMTRRLLAGLSPEDYSPAIHAIATEMEIKQDLASRLSMVA 599

Query: 181 -------LDISPDAPWVTE--AVVQQYVLAKEWSRAITFL------------NQKKKNAK 219
                    +SP  P      AV   +    +   A   L            +Q+   A 
Sbjct: 600 NPVPLIREALSPPDPTGARGVAVADLFRQRGDMIHARMALRIASTRTLDLSADQRLAYAT 659

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIM-ASICAAKSLISQNKKR 277
           E+ +    +  AR L     G    + +  + E ++      M  ++  +  L  +  + 
Sbjct: 660 EYMKISNPVAAARLLAPLGDGSGTGAGNALLPEQVQTLQQLRMGIAVAQSDLLNQRGDQA 719

Query: 278 KAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +A   L    + +P    P++A    +     +   L+  L +   N + +++     + 
Sbjct: 720 QAYDHLAPALQADPEATSPKLALARLYNGQGKSGKALEIDLAVLRHNPQDLDARQAAVQA 779

Query: 335 ALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           A+  G    A   AM  ++ +P     +L +A  +QA+ H    I    + A
Sbjct: 780 AVNSGRKSLATRLAMDGVQESPMDARAWLAMAVADQADGHGHRTISD-LRRA 830


>gi|300870179|ref|YP_003785050.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687878|gb|ADK30549.1| TPR domain protein [Brachyspira pilosicoli 95/1000]
          Length = 631

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 97/297 (32%), Gaps = 40/297 (13%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           N  +A+ +     + H+     L   L   I L   + N A   +  +  + +    A Y
Sbjct: 66  NYTMAQTLIDDAYRYHSKDYRVLERKLT--IELLNNKNNEARTTINQIKALDSKNYLANY 123

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +    S R+G   +A     +A+ I+      T A+    +   + + A+   N   KN 
Sbjct: 124 AEGVLSERVGYYKTAMSLYERAMIINRTRSEATVALAYLKLANGDRNAALDLFNLNVKNN 183

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                  A      +      G+  AS ++   +L    N   A I  A   ++ ++   
Sbjct: 184 P----RMAESYYNLANYYYITGNYNASLNEIKNALYYYTNYNDAKILQANVYMALDRYND 239

Query: 279 AEVILE-----------KIW-------KVNPHPEIANI---YTHLLSENTVGKLKRALRL 317
           A  ILE           K +       + N  P   N    Y  +  E+ +G+L     L
Sbjct: 240 AIAILEYLPESSFRDDTKNYYIGNVYERANNFPSAKNAYINYLRVKPEDELGRLAYERVL 299

Query: 318 EEINKESVESLVIVSKIAL----------EMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
              N ++        + AL           +    ++ A     +K+ P      L+
Sbjct: 300 FNTNPQADYERD---RAALYYANKASYYTRLADKVRSQAYLKHMLKLNPANTYARLM 353


>gi|20090471|ref|NP_616546.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
 gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1885

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 89/299 (29%), Gaps = 36/299 (12%)

Query: 76   LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALA 132
              +  YD+  +A    LM        +A+   S + +      E       +   Q  L 
Sbjct: 1413 FSQERYDEALEAFEQALMESP---YEVAKIEESEIEKSKISDPELEDAWTKIGLAQ--LK 1467

Query: 133  ERQYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             R+Y  A +  E +L+   T           +  L            A     KAL+++P
Sbjct: 1468 TRRYEDAFDTFEKILEKNPTDADVWYLSGLVMRGL-------DQNEEAVEVFEKALELNP 1520

Query: 186  DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                  E      +    +  A            E       +L +R++ +    D   +
Sbjct: 1521 ALTAALEQKGLGLLALCRYEEARDAFGSALALNPE----NVDILYSRAVASYKLLDFEEA 1576

Query: 246  YHDAIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IAN 297
              D    L           A      + I      +A   L+ + +  P H +    +A 
Sbjct: 1577 SKDLERLLLFAPGFPDYTKACYMLGIASIELQDYERALQALDLVLEREPAHRDALYNMAL 1636

Query: 298  IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +  +L       +     +L E + E  ESL  +    LE+  + +A      A    P
Sbjct: 1637 VLFNLEEYEEAART--FEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNP 1693



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 17/195 (8%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              +  +   V  K + +AI   N+     K+ +   A+     +L   +      +   
Sbjct: 7   EAFQRGLDL-VKRKRYEKAINTFNKIL--DKDPDHKEALFHRGLAL--LETEKTQEALDS 61

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA----NIYTHLL 303
             ++L+L   +  A         +  +  +A    E   + +P  PEI       +  + 
Sbjct: 62  FNDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAFAEM- 120

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-- 361
            E     +    +  E+  E   +   +  +A +    ++A      A++I+PR      
Sbjct: 121 -ERAEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWY 179

Query: 362 ---LLLAQIEQANSH 373
              L+LA+IE+  + 
Sbjct: 180 AKGLILAKIEKYENA 194



 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 11/156 (7%)

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292
           L      +   +     E LK     + A      SL+   +   A   LEK+  ++P +
Sbjct: 557 LLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDY 616

Query: 293 PEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P++A       +        L+   +L   N E +E      K+A+E+G  + A      
Sbjct: 617 PDLAYSLGVALMELGELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEK 676

Query: 351 AMKIAPRKE--------IFLLLAQIEQANSHNTDKI 378
            +   P             L + + E A     + I
Sbjct: 677 VLLEKPGSREAWYRKGLALLNMERFEDAVKAFDEVI 712



 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 88/277 (31%), Gaps = 25/277 (9%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148
            G+ SI   +   A +    V ++   H + L  +    +     +Y  A    E +L+  
Sbjct: 1601 GIASIELQDYERALQALDLVLEREPAHRDALYNM--ALVLFNLEEYEEAARTFEQLLEAS 1658

Query: 149  --IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW----VTEAVVQQYVLAK 202
               P +       L      + DL  A +   KA   +P            +++   +  
Sbjct: 1659 PEDPES--LNYLGLCL--LELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQ- 1713

Query: 203  EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
                ++ + ++  + + E     A+     +    +      +       LK   N+I A
Sbjct: 1714 ---ESLGYFDRILEISPE--NYDAMNYKGVAFCMLE--QYREALKSFDNVLKKDPNNIKA 1766

Query: 263  SICAAKSLISQNKKRKAEVILEKIWKVNP-H-PEIANIYTHL-LSENTVGKLKRALRLEE 319
                      Q     A    ++   +NP H P +  +   L  + +    LK   +L  
Sbjct: 1767 VYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLR 1826

Query: 320  INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            I  +  +++     +  ++    +A       + I P
Sbjct: 1827 IKPQDPQAMNYRGVLLGKLEKYGEAIKAFDEVLSIYP 1863



 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 63/230 (27%), Gaps = 41/230 (17%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + +      A     +AL+ISP       A        +++  A+   +   +       
Sbjct: 151 AGKAERYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALECFDFLIREKP---- 206

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                L  + L  A+ G    +     + LK    +  A       L   ++   AE  +
Sbjct: 207 KDTAALEQKCLILANLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTI 266

Query: 284 EKIWKVNP-HPEIA-----------------NIYTHLLSENTV----------------- 308
            K+ K+NP H E                     +   +  +                   
Sbjct: 267 SKVLKLNPGHREAWFRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEV 326

Query: 309 --GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               L+    + E   +  E     +   L++ +  +A        ++ P
Sbjct: 327 YEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDP 376



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 1/120 (0%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            A  +Y  A E    +L+       A+Y+      R+G   +A  Y  K + +SPD P +
Sbjct: 560 FASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDL 619

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             ++    +   E  +A+     K       +          ++E  +    + ++   +
Sbjct: 620 AYSLGVALMELGELEKALETFE-KLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVL 678


>gi|197102526|ref|NP_001127296.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Pongo abelii]
 gi|55727502|emb|CAH90506.1| hypothetical protein [Pongo abelii]
          Length = 471

 Score = 53.8 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 52/176 (29%), Gaps = 6/176 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                ++++      A    A          +A        K+   P+  + Y +L
Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNL 469



 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DGSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            I  A +L++      A        + N  P++     + +  +    LK   RLEE   
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178

Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356
              +++E+     V+   L       G I  A      A+ + P
Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222


>gi|261821898|ref|YP_003260004.1| tetratricopeptide repeat protein [Pectobacterium wasabiae WPP163]
 gi|261605911|gb|ACX88397.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium wasabiae
           WPP163]
          Length = 389

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 77/248 (31%), Gaps = 25/248 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + + +        R  AV  L  +    G  + A+         +    S
Sbjct: 83  GEVDRAIRIHQALTESASLTFEQRLLAVQQLGRDYMVAGLYDRAEEIFNQLVDEEDFRRS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++Q +    +W  AI    +  K  K+  R   A      +L      D+ 
Sbjct: 143 -----ALQQLLQIHQATSDWQTAIDVAEKLVKMGKDQLRVDIAHFYCELALLAMGSDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIAN 297
            +     +          ASI   +  ++Q    +A   L       K       P +  
Sbjct: 198 KALTLLKKGATADKQCARASIMMGRIYMAQQDHSRAVEALRQVLDQDKELVSETLPMLQE 257

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y HL  +  +       R  E N  +  + ++++ I  +    + A A     ++  P 
Sbjct: 258 CYQHL--DKLLDWANFLKRCVEENTGAT-AELMLADILEKEEGAEVAQAYINRQLQRHPT 314

Query: 358 KEIF-LLL 364
             +F  L+
Sbjct: 315 MRVFHRLM 322


>gi|88704018|ref|ZP_01101733.1| TPR domain protein [Congregibacter litoralis KT71]
 gi|88701845|gb|EAQ98949.1| TPR domain protein [Congregibacter litoralis KT71]
          Length = 928

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 83/263 (31%), Gaps = 47/263 (17%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A+  I LAR+  +    +        ++    + AL   + + A E  E +L       
Sbjct: 448 LASDRIDLAREAVAGYQSESPDDTRPQIF--AARFALQTGERDKAREIFESVLVKEPGNI 505

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A   L   +    +++ A+++    L+  P      + ++    L ++           
Sbjct: 506 NANGGLAIMALNERNIDEARQHFYSILEFHPTNV---QTLMNLATLEEQ----------- 551

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                                    G+  A       ++     ++   +  A+  I Q 
Sbjct: 552 ------------------------AGNTDAMLDALNRAMSADPQALPPRLALARYEIIQE 587

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
             RKAE +L+ + + +      H  +A  +       T   +    ++  +      SL 
Sbjct: 588 NPRKAEALLDTVREHHTNSFELHQLLAAAFMASRQ--TTQAVTSGRQMLRLRPNDPASLA 645

Query: 330 IVSKIALEMGSIDQAHAKAMLAM 352
            V+++    G +  A   A   +
Sbjct: 646 YVARLEQNDGQLGAAREHAERVL 668



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 91/298 (30%), Gaps = 43/298 (14%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            N+  A +    +  +   +      L    + L              +LQ+      A+
Sbjct: 315 GNLATAERQLIKLVAEQPSNVPA--RLQLASVYLQRNDALATERVAREILQLEEKNIAAM 372

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216
             L       G+   +++   +   + PD+      +    +L  + +  I  L +    
Sbjct: 373 RLLALALVAQGEYVESEQLYQQLATLKPDSVEDRTGLGATQLLLGDTASGIVELEKALAM 432

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           + K       ++    + +  D      +            +     I AA+  +   ++
Sbjct: 433 DPKNAQLRERLIGAYLASDRID-----LAREAVAGYQSESPDDTRPQIFAARFALQTGER 487

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            KA  I E +    P                                ++ +   ++ +AL
Sbjct: 488 DKAREIFESVLVKEP-------------------------------GNINANGGLAIMAL 516

Query: 337 EMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
              +ID+A       ++  P   +  + LA +E+  + NTD +L     A+ A  DP 
Sbjct: 517 NERNIDEARQHFYSILEFHPTNVQTLMNLATLEE-QAGNTDAMLDALNRAMSA--DPQ 571


>gi|315187290|gb|EFU21046.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 918

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 33/238 (13%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G   L  G++++       A++  S   +      E L  L    I   E  +  A E  
Sbjct: 46  GVHLLS-GMIALRQDRNEEAKEAFSKALELGGEEAEALNNL--GVIYRKEGDHRKAIEYF 102

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
              L     R   +Y+L       G    A+    KAL+  P        +   Y     
Sbjct: 103 RKALAADPDRPDILYNLANACKDAGLFEEAEAAYRKALEHDPHLVSAYNNLATLYQQRGA 162

Query: 204 WSRAITFLNQKKKNAKE-----------------WNRNRAILLIARSLEN---------- 236
             +A+  L +      +                 +   RA L  A               
Sbjct: 163 LGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYEEARASLHRALQKRPGWVEALNNLG 222

Query: 237 ---ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                +G   A+     E+L L      A+      L    + R+A     +  ++ P
Sbjct: 223 IVEQSRGHHEAALACFREALTLDPLHAAAANNMGSILALLGRYREAFDWFVQALRIQP 280


>gi|149920119|ref|ZP_01908592.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149819062|gb|EDM78499.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 1773

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 29/273 (10%)

Query: 124  LLEVQIALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATK 179
            LL  ++     +   A E L   L+     P  R   + ++     + G L+ A+    +
Sbjct: 883  LLIARLRE-AGEDERAEELLRERLEQAADGPEERAEMLVTMARMREQAGALDEAEARVRE 941

Query: 180  ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            AL++   +      +       +    A+  L +  + + +       L  A        
Sbjct: 942  ALELHDGSSAGWALLRDILEQRERPLEALEALVRAAQTSTDPGEKVRGLFAAAKKWATAL 1001

Query: 240  GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
                 +     E + L  +   A+    + L+ +    +A           PH E     
Sbjct: 1002 SKPERALPLLRELVALDPHHEEATALFTELLVDRGDLGEAL----------PHAERWVTQ 1051

Query: 300  THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                  N      RA  L               + AL     D+A     +A +  PR  
Sbjct: 1052 LRAGDPNNREANARAHALA-------------GRCALAAHDKDKARELLRVAKEFDPRNR 1098

Query: 360  -IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             +   LA +E  + +    +  +   A+ A   
Sbjct: 1099 EVARALADLELESENWDAALKAYQGLAMQASQG 1131



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 3/123 (2%)

Query: 164  SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKE 220
            +    D + A+     A +  P    V  A+    + ++ W  A+     L  +    + 
Sbjct: 1074 ALAAHDKDKARELLRVAKEFDPRNREVARALADLELESENWDAALKAYQGLAMQASQGEG 1133

Query: 221  WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              R +A L +   L     G++  ++     +L L      A+    +   +  K+ +A+
Sbjct: 1134 EVRTQAELYLRMGLARRGLGELAKAHQMIDRALDLDPGFGDAARLLVELADAPAKQVEAQ 1193

Query: 281  VIL 283
              L
Sbjct: 1194 KRL 1196


>gi|125606531|gb|EAZ45567.1| hypothetical protein OsJ_30228 [Oryza sativa Japonica Group]
          Length = 1243

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKK 216
                ++ +  D  +A++      + S       EA++       + + A    L  K  
Sbjct: 3   RG-ASQAQQRKDAEAAEQLDRLMREASSPRKEAREALLLDRSRRHDEAIARVDELAAKHP 61

Query: 217 NAKEWNRNRAILL---IARSLENAD----KGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            +        +L     +R++   D    +     +    I++ +L  N +  ++  A +
Sbjct: 62  ESAAVAHLAGLLHYHATSRAMAAKDRQGVEAHCNTARDFYIKAKRLAPNCVEIAVRLALA 121

Query: 270 LISQNKKRKAEVILEKIWKVNPHP-EIAN---IYTHLLS-ENTVGKLKRALRLEEIN 321
            +      +AE  +E+     P P + A     Y + L   ++  ++++A R+    
Sbjct: 122 RLRCFNDGEAEPEIERA-LAIPFPTDPAENNVAYDNALGTTSSRDRVEKARRVALAR 177


>gi|311694783|gb|ADP97656.1| TPR repeat protein [marine bacterium HP15]
          Length = 891

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 86/233 (36%), Gaps = 11/233 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              G+   A     +A++  PD         +V   +   + S  +  L++      E  
Sbjct: 373 IDKGERREAYATLARAIEARPDDTELLAMHGMVALSLEDTK-SEGVASLSRALSLNPENV 431

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK---RKA 279
           R R  L          +G    +      +     +    +    + LI + +    R+ 
Sbjct: 432 RLRLALANYY----EGQGMPEQALGQLRIAFANKPDDWPTTAAYVRLLIREGQTGELREL 487

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +  LE  +  N   ++    +   + +T   +K+   L + N ES+E  + ++++  E G
Sbjct: 488 QQSLENGYPENRSAQLLAAISLAGTGDTEEAIKKLEGLRDTNPESIEVNITLAQLYQEAG 547

Query: 340 SIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +A ++    A +  P+  +    A++  AN  N   +  WT+S   A P+
Sbjct: 548 QPAKAVNSFVAAAKQTEPKLPLLFRAARLHAANHQNESAVEDWTKSVSQAEPE 600



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 100/292 (34%), Gaps = 21/292 (7%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCR-IGDL 170
                   + L   +  + + ++  A E L   L    T E        +  + R  GD 
Sbjct: 110 RLDQQPGEIALPLAESYIGQGKHLSARETLA--LADLETPEEKGRGAVVQGGALRLAGDY 167

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A     KAL         T  +++ Y+      +A++  +       E +    ++L 
Sbjct: 168 QAAIEQFEKALAEGWQVEKATAGILKTYLHLNNPQKAVSEADSYLAEYPESS--EVLMLK 225

Query: 231 ARSLENADKGDM-IASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAE---VI 282
            R+L   ++ +  + +   A+ +L   D  +          ++ L  Q +  +A+    +
Sbjct: 226 GRALYTLNRLEPAVEALTAAVGALPNSDFFLPVRRQTLTLLSRVLTEQGRVTEAQVYNRV 285

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           L +    +   +  +  + +         +    L ++N ++    + +  + L+ G + 
Sbjct: 286 LAENTDSDLENQAKSAISAIKEGRFDEASETLQDLLQLNPDNERIALTLGALNLQQGRLQ 345

Query: 343 QAHAKAML--AMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +           + +P + I    +A+I++               A+ A PD
Sbjct: 346 EGLDLLSQNIDPETSPTRFIRLTTMARIDKGERREAYAT---LARAIEARPD 394


>gi|160900453|ref|YP_001566035.1| type IV pilus biogenesis/stability protein PilW [Delftia
           acidovorans SPH-1]
 gi|160366037|gb|ABX37650.1| type IV pilus biogenesis/stability protein PilW [Delftia
           acidovorans SPH-1]
          Length = 295

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 83/240 (34%), Gaps = 8/240 (3%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATRE 154
            + N           + +        + L          + ++A  E  + +   P++  
Sbjct: 53  GSGNASSVSNASMASAAEADPRRRASIRLELAASYFQAGRIDVALEEVNQALAADPSS-- 110

Query: 155 FAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              Y L      R  D + A     KA+ + P    +           K++++A  +L++
Sbjct: 111 ADGYGLLALIYMRNQDWDQADASLRKAMSLRPQDGDLQHNYGWLLCQRKQYAQAQEWLDK 170

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                    R +  +  A+ L     G +  +    ++  +L   + + +   +  ++  
Sbjct: 171 ALAQPGYLERPKTWM--AKGLCLQQAGLLAEAQQALLKGYELDPANPVIAYHLSNVMLQG 228

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVS 332
              ++A+  + ++   +P     +++  +  E  + +     +L  ++++   ES   ++
Sbjct: 229 GDAKRAQFYIRRL-NSSPQSNAESLWLGIKIERALQQSAAMRQLADQLHQRFPESRQWLA 287


>gi|149192370|ref|ZP_01870572.1| hypothetical protein VSAK1_00010 [Vibrio shilonii AK1]
 gi|148833789|gb|EDL50824.1| hypothetical protein VSAK1_00010 [Vibrio shilonii AK1]
          Length = 389

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 92/287 (32%), Gaps = 51/287 (17%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +    ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFVQLVDEPEHREA 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                    ++  Y    EW +AI +    +
Sbjct: 143 AL----------------------------------TQLLAIYQQTSEWHKAIEYATALQ 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  K+  +N  A      ++     G+   +  +  ++L +      ASI   K  +   
Sbjct: 169 KMGKKRVKNSIAHFWCELAMIEKADGNTNKAIQNFKKALAVDPRCARASISLGKLYLEDE 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              K    LE +      +     P +A  Y HL  E  + +  RA  +E+    S E  
Sbjct: 229 DYAKTVSYLESVLEQDKDFISEVLPTLAECYHHLGQEQGLVEFLRA-SIEKGAGVSAE-- 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370
           ++++++       + A A     +  +P     + L+    A  E+ 
Sbjct: 286 LMLAQLVANHEGTEAAQALLTRQLVRSPTMKGFYRLMDYHLANAEEG 332


>gi|307111439|gb|EFN59673.1| hypothetical protein CHLNCDRAFT_133184 [Chlorella variabilis]
          Length = 1558

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 6/154 (3%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            G L+ A+    +AL   P    V +A         +   A   L    +   + +     
Sbjct: 1373 GHLSRARPLFQQALRQEPSNTHVLQAWGVAEARHGDAGEARRLL----RRCTDADPECRA 1428

Query: 228  LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               A +    + GD+ A+       L+L   S+ A     +      + + A  +L++  
Sbjct: 1429 AWHAWARLEEEAGDVGAARQLYRTVLRLRPGSVPALSALGRLERRAGQMQAAHQLLQEAL 1488

Query: 288  KVNPH--PEIANIYTHLLSENTVGKLKRALRLEE 319
              +PH  P +A +   L ++    + +R  +   
Sbjct: 1489 AADPHHAPSVAEMAALLEAQGKPAQAQRMSKRVR 1522


>gi|115452075|ref|NP_001049638.1| Os03g0263900 [Oryza sativa Japonica Group]
 gi|108707321|gb|ABF95116.1| calcium-binding EF hand family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113548109|dbj|BAF11552.1| Os03g0263900 [Oryza sativa Japonica Group]
          Length = 848

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 15/224 (6%)

Query: 173 AQRYATKALDISPD----APWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           A     +A ++ P            +  + ++  AKE    +  L   +    +      
Sbjct: 293 ALSSFRRACELQPTDVRPHFRAGNCLYALGRHSEAKE--EYLLALEAAEAGGSQSADILP 350

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            + +   +    +G ++ +     E+  LC +   A      +L    + R AE  LE+ 
Sbjct: 351 QIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEA 410

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             + P     H ++ +   H + ++    ++   +  ++    V++L  +  + ++ G  
Sbjct: 411 IFLKPDYADAHCDLGSA-LHAIGDDDRA-VQEFQKAIDLKPGHVDALYNLGGLNMDAGRF 468

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            +A       + I P      L   +       +++     + A
Sbjct: 469 VRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 512



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 9/165 (5%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--MLQIP 150
           +++ A  + L    H   +      +   + LL         +Y  A + LE    L+  
Sbjct: 358 IAMEAEGMVLGACEHYREAAILCPSHARALKLLGS-ALFGVGEYRAAEKALEEAIFLKPD 416

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                        +   GD + A +   KA+D+ P        +    + A  + RA   
Sbjct: 417 YADAHCDLGSALHAI--GDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEM 474

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             +        N  RA L   +++    +G+   +     E+ K+
Sbjct: 475 YTRVLSIRP--NHWRAQL--NKAVALLGQGESEEAKKALKEAFKM 515


>gi|303276779|ref|XP_003057683.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545]
 gi|226460340|gb|EEH57634.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545]
          Length = 782

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 88/271 (32%), Gaps = 15/271 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
                A + +    +         V L +          +  A    E  +Q+  T   A
Sbjct: 184 GQFAEALQWYRRALRSQGAAAPAGVRLGIGACQYQL-GNFEGARLAFERTIQLEPTNVDA 242

Query: 157 VYSLYFESCRIGDLNSA----QRYATKALDISPDAPWVTEAVVQQYVLAKEWS-RAITFL 211
           +  L   +    +  +A         +A  + P  P     + + ++ A + + +AI  L
Sbjct: 243 LVGLASLADAKTNYVAAVKRGLELLERAFTLDPHHPGAQVELAKHFLYAGDDNLQAIEQL 302

Query: 212 NQKKKNAKE-----WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            +              R RA   + R+  +  +G++  +      + ++ +     +   
Sbjct: 303 TETLIRGGADAIGSTPRLRAQAAMTRAKAHHSRGELQRAQGLYQAAAQMDETFHEPNFGL 362

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLS--ENTVGKLKRALRLEEINKE 323
           A+  +++   + A    E+ +   P+  E+  +Y H     ++         +  E +  
Sbjct: 363 AQVALTRGDNKAALTYAERAYAAFPNSVEVQRVYGHCRRIADDAAAMNGGGGKAVEADPY 422

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++ +      L     + A A    A++I
Sbjct: 423 DYDAQIEHGDALLAAREYEAALAAYEGAVEI 453



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 97/309 (31%), Gaps = 40/309 (12%)

Query: 125 LEVQIAL-------AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           L  Q A+       +  +   A    +   Q+  T     + L   +   GD  +A  YA
Sbjct: 320 LRAQAAMTRAKAHHSRGELQRAQGLYQAAAQMDETFHEPNFGLAQVALTRGDNKAALTYA 379

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A    P++  V   V        + + A+     K   A  ++ +  I      L   
Sbjct: 380 ERAYAAFPNSVEVQR-VYGHCRRIADDAAAMNGGGGKAVEADPYDYDAQIEHGDALLAAR 438

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           +    +A+Y  A+E L         +   + SL++     KA            H +   
Sbjct: 439 EYEAALAAYEGAVEILNNGGKKADGTSTISSSLLNNVGVLKAMTK-----GAAGHEDTRA 493

Query: 298 IYTHLLS----------------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           ++   L                 +    + K      ++          +++++ E G I
Sbjct: 494 VFLAALEAAAKEEGGKGEKGEALDEPAERRKATGARLQVA-------FNLARLSEEKGDI 546

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPLWISDDGY 400
           + A A+    +  +P     LL      A   N      + + AL     DP  ++  G+
Sbjct: 547 EDATARYDDLLVASPEMTECLLRKAAMAAKRENFAAAEQFARKALETKPDDPDAMASVGH 606

Query: 401 L---SSVWL 406
           +    S W 
Sbjct: 607 VLMKQSRWS 615


>gi|307946654|ref|ZP_07661989.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4]
 gi|307770318|gb|EFO29544.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4]
          Length = 627

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 94/265 (35%), Gaps = 27/265 (10%)

Query: 136 YNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            + A +        PAT    +   L  +    G+   AQR   + L   P+       +
Sbjct: 2   RSAAQKA------KPATTLDKLREGLTLQG--AGEYEKAQRIYKQILKKQPNNKDALHLL 53

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              Y       RAI F+ +  K         A L  AR+  +            + +++ 
Sbjct: 54  GVSYRQLGFPKRAIEFITKAIKLDPNQGSFYANL--ARAKSDLPNIPADEILELSEKAIT 111

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV--GKL 311
           L  +   A    A +L   ++  +AE +L+K+ ++ PH PEI   Y  LL E       L
Sbjct: 112 LDSSLPEAHNLRALALKKLDRNEEAEELLKKLVELYPHNPEINRNYGVLLREQKRFEEAL 171

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-----IFLLLAQ 366
              +         VE++V +S+   E+   D A  +  +A+K  P        I  L+  
Sbjct: 172 DFFITAMRFQPNEVETIVEISRCRTELKQHDVAEKELFIALKRNPNNGKLKHEIARLMFS 231

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
           + +               AL A+ D
Sbjct: 232 VSRVAEG--------LPYALDAVRD 248


>gi|227111825|ref|ZP_03825481.1| hypothetical protein PcarbP_02612 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 389

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 86/279 (30%), Gaps = 51/279 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  +++  +   E    LL VQ      +A   Y+ A E    ++     R
Sbjct: 83  GEVDRAIRIHQALTESASLTFEQ--RLLAVQQLGRDYMAAGLYDRAEESFNQLVDEEDFR 140

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+                                  + ++Q +    +W  AI    +
Sbjct: 141 RSAL----------------------------------QQLLQIHQATSDWPTAIEVAEK 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L      D+  +     +          ASI   +  ++
Sbjct: 167 LVKMGKDQLRVDIAHFYCELALLAMGSDDLDKALTLLKKGATADSQCARASIMMGRIYMA 226

Query: 273 QNKKRKAE----VILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           Q    +A      +LE  K       P +   Y HL  +  +       R  E N  +  
Sbjct: 227 QQDYSRAVESLRQVLEQDKELVSETLPMLQECYQHL--DKPLDWENFLRRCVEENTGAT- 283

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           + ++++ I       + A A     ++  P   +F  L+
Sbjct: 284 AELMLADILEREEGAEVAQAYINRQLQRHPTMRVFHRLM 322


>gi|197118892|ref|YP_002139319.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197088252|gb|ACH39523.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 265

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A +   A K    ++ +       L       +     ++  A      + ++       
Sbjct: 55  ADDAIAALKKGLELAPEDLDGITAL-----GDVYFESGKHKDALGCYRKVTELQPKECDG 109

Query: 157 VY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
                L + +        A +   KAL++ P   +   A+   Y    E  +AI   ++ 
Sbjct: 110 YVSMGLVYNAMER--TEDALKSFQKALELDPKNVFALNAMGDLYYGLGENEKAIEAYHK- 166

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                E +   A           D  D+ ++  + +E+++L  +  M+ +      I Q+
Sbjct: 167 ---GIEIDPADATARFNLGELYYDMDDLESAERETLEAVRLDPDFTMSYLTLGNICIDQD 223

Query: 275 KKRKAEVILEK 285
           + ++A    E 
Sbjct: 224 RTQEAIKYFES 234


>gi|209549954|ref|YP_002281871.1| hypothetical protein Rleg2_2370 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535710|gb|ACI55645.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 1272

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 73/264 (27%), Gaps = 41/264 (15%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATR-EFAVYSLYFESCRIG 168
             +  F ++  +  +  Q+A          E +   +   P      A  + Y  +    
Sbjct: 389 DAEKRFPDDPTLPAIRAQLAQLIDDRAQMQEAVNRALSLDPNHPIALAARASYK-ASYES 447

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+N A     +A++++P A     ++            A          A   +    + 
Sbjct: 448 DINGALADLNRAIELAPGASGSLNSMGLLQSAR----DANGEAEAAFLRAVALDPQDPVP 503

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
               ++   D+  M  +  +   +L    +  +A +   +  +   ++ KA   L     
Sbjct: 504 HANLAILYLDQSRMKEAKREIDAALAADPSFDIALLARGRYYLQTGERDKALEDLLAA-- 561

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI---DQAH 345
                                           N    +S ++++    E G     +QA 
Sbjct: 562 -----------------------------STANPAHSQSQLMLAAAHYEKGDRIPSEQAV 592

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQ 369
             A    K  P    F     I+ 
Sbjct: 593 DNADRLDKNDPVISSFRTAVDIDD 616



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 94/326 (28%), Gaps = 60/326 (18%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML------ 147
           S        A  +     ++ T   +  V L++  IA AE++Y+ A       L      
Sbjct: 274 SAFDGRQVAAETLQEVRRRKLTTLQKARVDLIDATIAGAEKRYDEAARLFAAALPHLDPA 333

Query: 148 ---------------------QIPATREFAVYSLYFESCRIG---DLNSAQRYATKALDI 183
                                + P +     Y    ++   G   +  ++      A   
Sbjct: 334 RRNMAQYGGYFARSLADPAHVEKPPSSAVGPYGAIMQAYTAGFLKNPRASVDLIKDAEKR 393

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDM 242
            PD P     +        +       + +    A   + N  I L AR+   A  + D+
Sbjct: 394 FPDDP----TLPAIRAQLAQLIDDRAQMQEAVNRALSLDPNHPIALAARASYKASYESDI 449

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---------PHP 293
             +  D   +++L       +  +  S+      R A    E  +            PH 
Sbjct: 450 NGALADLNRAIELAPG----ASGSLNSMGLLQSARDANGEAEAAFLRAVALDPQDPVPHA 505

Query: 294 EIANIYTHLLSENTVGKLKRALR-----LEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            +A +Y          ++K A R     L   +     +L+   +  L+ G  D+A    
Sbjct: 506 NLAILYLD------QSRMKEAKREIDAALAA-DPSFDIALLARGRYYLQTGERDKALEDL 558

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHN 374
           + A    P      L+         +
Sbjct: 559 LAASTANPAHSQSQLMLAAAHYEKGD 584


>gi|220915380|ref|YP_002490684.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219953234|gb|ACL63618.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 1256

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 86/246 (34%), Gaps = 15/246 (6%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           + A  E  +    +++E  L        A+ +L  E    G   +A R   +A+  +P  
Sbjct: 364 EAAALEEDHGRRRQRIEAALAAAPEDSRALRALGQEELDQGRPQAAARLLERAVRAAPGW 423

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                 + +    A     A   L  +   +       A+   ARS     + +  ++  
Sbjct: 424 AAPRVELAEALSRAG--LEARGALLAEATASAFATVPSAVRAAARSARRLGRTEEASARS 481

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
             + +L+  D    A++  A+ L  +     A  +LE+  +++P    ++ Y  L   + 
Sbjct: 482 RTLVALRFDDAQTRAAL--AQILADRGDVAGARALLEEALRLDP----SDAYQRLRLGDL 535

Query: 308 VGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +    R             +  +  ++     +  L  G +  A A    A+++ P+   
Sbjct: 536 LAASGRGEEAERAYAAALALAPDEPDAWERRGRARLSQGRVKDAQADLQRALELRPQSPE 595

Query: 361 FLLLAQ 366
             LL +
Sbjct: 596 LKLLVR 601


>gi|28564906|gb|AAO32537.1| TOM70 [Naumovia castellii]
          Length = 625

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 69/202 (34%), Gaps = 8/202 (3%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            +++ + +   +++   Y  +    + + L VY    Q+    + Y  A  + E   ++ 
Sbjct: 376 YLALISADKSTSQEYSKYFDKALELNPDSLSVYYHRGQLYFITQDYPKAKVEFEKAKELD 435

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T  F    L   + R  D +  Q+   +     P  P V     +      +++ AI  
Sbjct: 436 ETNIFPYIQLACLAYRENDFDRCQKLFDETRQKFPTYPEVPTFYAEILADKGDFALAIKQ 495

Query: 211 ------LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
                 L + +KN               + +  +  ++  +     ++ ++   S  A +
Sbjct: 496 YDIATRLEKAQKNIHVGIAPLVGKATVLARQP-NLLNLKEATQLMEKACEIDPRSEQAIV 554

Query: 265 CAAKSLISQNKKRKAEVILEKI 286
             A+  +   +   A  + EK 
Sbjct: 555 GLAQLKLQNEEVDLAIELFEKA 576


>gi|222624615|gb|EEE58747.1| hypothetical protein OsJ_10236 [Oryza sativa Japonica Group]
          Length = 827

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 15/224 (6%)

Query: 173 AQRYATKALDISPD----APWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           A     +A ++ P            +  + ++  AKE    +  L   +    +      
Sbjct: 272 ALSSFRRACELQPTDVRPHFRAGNCLYALGRHSEAKE--EYLLALEAAEAGGSQSADILP 329

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            + +   +    +G ++ +     E+  LC +   A      +L    + R AE  LE+ 
Sbjct: 330 QIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEA 389

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             + P     H ++ +   H + ++    ++   +  ++    V++L  +  + ++ G  
Sbjct: 390 IFLKPDYADAHCDLGSA-LHAIGDDDRA-VQEFQKAIDLKPGHVDALYNLGGLNMDAGRF 447

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            +A       + I P      L   +       +++     + A
Sbjct: 448 VRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 491



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 9/165 (5%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--MLQIP 150
           +++ A  + L    H   +      +   + LL         +Y  A + LE    L+  
Sbjct: 337 IAMEAEGMVLGACEHYREAAILCPSHARALKLLGS-ALFGVGEYRAAEKALEEAIFLKPD 395

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                        +   GD + A +   KA+D+ P        +    + A  + RA   
Sbjct: 396 YADAHCDLGSALHAI--GDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEM 453

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             +        N  RA L   +++    +G+   +     E+ K+
Sbjct: 454 YTRVLSIRP--NHWRAQL--NKAVALLGQGESEEAKKALKEAFKM 494


>gi|218779730|ref|YP_002431048.1| hypothetical protein Dalk_1883 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761114|gb|ACL03580.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 663

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 73/236 (30%), Gaps = 23/236 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G L+ A  +  +A  I PD P     + Q    A ++++A     +            A
Sbjct: 421 QGKLDEAVEHFRQASAIQPDYPEAWNNLSQAAFAAGDYAQAKALAEKALSLDPV----NA 476

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +      +      D   +      +     +   A++  AK L ++    KA V  E  
Sbjct: 477 LGRWNAGMACMRLNDRHCALKHFALATASDPDWGRANLMLAKLLAAKGHPEKARVFFENA 536

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             V P     H   A +   L        L    R   ++ ++   L   ++     G  
Sbjct: 537 LAVMPESLEVHLVFAQVLEDL--GEYRQALGVYDRALLLDSDNPAVLYGKAQALFHAGYR 594

Query: 342 DQAHAKAMLAMKIAP------RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +  A   +    AP           +LLA        +  +   + + AL A PD
Sbjct: 595 TEGAALMKILTVSAPDNPGVNYNYGLMLLA------LGDGARAQAYLEKALAAKPD 644



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 67/252 (26%), Gaps = 10/252 (3%)

Query: 35  RLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAM-LFHMLHKRNYDKGYKALYT-GL 92
            LYR  P    ++    +    +L                  L    +   Y+A    G 
Sbjct: 359 WLYRRRPVFAAALSGMIVAGLCVLTWNQALLFKDSQTLWERTLEINPHS--YQAHNDLGA 416

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +      +  A +     S             L  Q A A   Y  A    E  L +   
Sbjct: 417 ILAGQGKLDEAVEHFRQASA-IQPDYPEAWNNLS-QAAFAAGDYAQAKALAEKALSLDPV 474

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                ++      R+ D + A ++   A    PD       + +         +A  F  
Sbjct: 475 NALGRWNAGMACMRLNDRHCALKHFALATASDPDWGRANLMLAKLLAAKGHPEKARVFFE 534

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  E      +     +    D G+   +      +L L  ++       A++L  
Sbjct: 535 NALAVMPESLEVHLVF----AQVLEDLGEYRQALGVYDRALLLDSDNPAVLYGKAQALFH 590

Query: 273 QNKKRKAEVILE 284
              + +   +++
Sbjct: 591 AGYRTEGAALMK 602



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 73/244 (29%), Gaps = 15/244 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---W 189
           + + + A E       I      A  +L   +   GD   A+  A KAL + P      W
Sbjct: 421 QGKLDEAVEHFRQASAIQPDYPEAWNNLSQAAFAAGDYAQAKALAEKALSLDPVNALGRW 480

Query: 190 -VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A ++      +   A+        +  +W R   +L    +   A KG    +   
Sbjct: 481 NAGMACMRL----NDRHCALKHFALATASDPDWGRANLML----AKLLAAKGHPEKARVF 532

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW---KVNPHPEIANIYTHLLSE 305
              +L +   S+   +  A+ L    + R+A  + ++       NP            + 
Sbjct: 533 FENALAVMPESLEVHLVFAQVLEDLGEYRQALGVYDRALLLDSDNPAVLYGKAQALFHAG 592

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                      L     ++         + L +G   +A A    A+   P         
Sbjct: 593 YRTEGAALMKILTVSAPDNPGVNYNYGLMLLALGDGARAQAYLEKALAAKPDFSEAQKAL 652

Query: 366 QIEQ 369
           +I +
Sbjct: 653 EIAR 656



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 28/99 (28%), Gaps = 6/99 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATREFA 156
                A  +  Y        +   V   + Q              ++++    P      
Sbjct: 558 GEYRQA--LGVYDRALLLDSDNPAVLYGKAQALFHAGYRTEGAALMKILTVSAPDNPGVN 615

Query: 157 V-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             Y L   +   GD   AQ Y  KAL   PD     +A+
Sbjct: 616 YNYGLMLLAL--GDGARAQAYLEKALAAKPDFSEAQKAL 652


>gi|159468965|ref|XP_001692638.1| splicing factor, component of the U4/U6-U5 snRNP complex
           [Chlamydomonas reinhardtii]
 gi|158277891|gb|EDP03657.1| splicing factor, component of the U4/U6-U5 snRNP complex
           [Chlamydomonas reinhardtii]
          Length = 947

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 103/310 (33%), Gaps = 17/310 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
               ++   +   A                 +++L+  + A      + A   L      
Sbjct: 577 RAAAALEKAHGSRAALDELLKRAVTFCPQSEVLWLMAAKEAWLGGDVDGARAILARAFAS 636

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKA----LDISPDAPWVTEAVVQQYVLAKEW 204
            P +    + +   E     +   A+    KA            W+  A+V++ +   + 
Sbjct: 637 NPDSEAIWLAAFKVEFEN-NEPERARALLAKARENEAANGYPRVWMKSALVEREL--GDG 693

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           ++    L +  +    + +    L++ +       G   A+       L  C +SI    
Sbjct: 694 AKERALLEEGIRRFPAFEKF--YLMLGQLEARPGGGGAEAARAAYRAGLARCPDSIPLWR 751

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALR-LEEINK 322
            AA+         +A  +LE+    N  P+ A ++   + +E   G  K A   L +  +
Sbjct: 752 SAARLEEEAGNVARARALLEQARLKN--PKSAELWLAAIRTEQRAGNEKAADTALAKALQ 809

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYW 381
           +   S  + ++ A+ M        KA  A+K       +   +AQ+  A+    +K   W
Sbjct: 810 DCPTSGPLWAE-AISMAPRPARKTKATDALKRCDNDPHVVAAVAQLFWADRK-VEKARSW 867

Query: 382 TQSALHAMPD 391
              A+   PD
Sbjct: 868 FNRAVTLNPD 877



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 95/307 (30%), Gaps = 43/307 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +          L      L       A    + + +IP     +V  L+  +  
Sbjct: 354 AKALLARGVAQLPESTKLWMAAAKLEADDTAKARVLRKALERIP----TSVR-LWKAAVE 408

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---------- 216
           +   + A+   ++A++  P A  +  A+ +       +  A   LN  +K          
Sbjct: 409 LAAEDDARILLSRAVECCPQAVELWLALARLET----YENARKVLNNARKAVPTEPAIWV 464

Query: 217 --------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                   +  + +    I+   ++L++     ++      I+  + C+ S    +  A+
Sbjct: 465 TAAKLEEAHGADQDTVDKIV--GKALKSLSANGVVIHRDAWIKEAENCERSSPPQLVTAR 522

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           +++                 V+P    A +          G ++ A  L      +  S 
Sbjct: 523 AIVR----------CVAGLGVDPVDLEATLVADAEEAAKRGAVETARALYAQALATFPSQ 572

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQANSHNTDKILYWTQS 384
             + + A  +     + A     +K A    P+ E+  L+A  E     + D        
Sbjct: 573 AQIWRAAAALEKAHGSRAALDELLKRAVTFCPQSEVLWLMAAKEAWLGGDVDGARAILAR 632

Query: 385 ALHAMPD 391
           A  + PD
Sbjct: 633 AFASNPD 639



 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 4/124 (3%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E+ + G + +A+    +AL   P    +  A             +   L++  K A  + 
Sbjct: 548 EAAKRGAVETARALYAQALATFPSQAQIWRAAAALEKAHG----SRAALDELLKRAVTFC 603

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               +L +  + E    GD+  +      +     +S    + A K     N+  +A  +
Sbjct: 604 PQSEVLWLMAAKEAWLGGDVDGARAILARAFASNPDSEAIWLAAFKVEFENNEPERARAL 663

Query: 283 LEKI 286
           L K 
Sbjct: 664 LAKA 667


>gi|89093771|ref|ZP_01166717.1| hemY protein [Oceanospirillum sp. MED92]
 gi|89081901|gb|EAR61127.1| hemY protein [Oceanospirillum sp. MED92]
          Length = 417

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 132/386 (34%), Gaps = 36/386 (9%)

Query: 25  PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84
           P  V I + N    TS +V+L  L     A+ ++  +        A L      RN    
Sbjct: 26  PGYVLIAYNNTTVETSLWVLLIALVLAFVAFHIVVNLFTHTKLPTARLKAWKDGRNQQIS 85

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKL 143
            +    GL S++  N   A+K  +  +++       L+  L   + A  +       + L
Sbjct: 86  RRKTLKGLTSLSEGNWAQAQKQLAQAAERSDL---PLINYLAAARAAHEQNNEQATDDLL 142

Query: 144 -EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            +     P        S        G L        +   ++P   +V + +   Y+   
Sbjct: 143 QKARSTTPEAEVTVAISQAEIQLSRGQLEPCLATLLRLRTLAPKNTYVMKLLKDIYLRLN 202

Query: 203 EWSRAITFL-----NQKKKNAK--EWNRNRAILLIARSLENA--DKGDMIASYHDAIESL 253
           +W +    +     +Q  K+ +  E +R     L+  SL+N   +  D            
Sbjct: 203 DWQQLSKLIPILRKHQALKDDELSELSRQCYSKLLDESLQNLPVETSDEERLKTLGRTWH 262

Query: 254 KLCDNSIMA--------SICAAKSLISQNKKRKAEV----ILEKIWKVNPHPEIANIYTH 301
            L      A             + L+S   + +AE     ++++ W       +  +Y  
Sbjct: 263 DL-----PAEQTRDGDLVQRYTELLVSLGAESRAEQNLRDLIKRNWDEK----LVTLYGR 313

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +  EN   +L  A    + + ES   L+ + +++L      QA      ++ I P  E  
Sbjct: 314 VNGENAKKQLDNARGWLKSHAESPALLLTLGRLSLRNEHWGQAVKYFEQSLDIEPNSETL 373

Query: 362 LLLAQIEQANSHNTDKILYWTQSALH 387
             LA++ + +  + ++     Q  L+
Sbjct: 374 AELARLLR-HLGDGERAQTLLQQNLN 398


>gi|270295832|ref|ZP_06202032.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273236|gb|EFA19098.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 319

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 10/272 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+ +        A K  +          E + YL   Q+     + + AH+ LE M +I
Sbjct: 33  DGMRAQRMGRTDYAIKCFTEALA-IQEDFETMGYL--AQVYTQTNELDEAHKLLERMTEI 89

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                    SL        D  +    A KA++I          + +      +    I 
Sbjct: 90  EPEHTSTYLSLANVCYMQEDYPAMAGAAKKAIEIEEGNAMAHYLLGKADNGQGDGIMCIA 149

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +      ++   R    + R+           +  D    L        A +   K 
Sbjct: 150 HLTKAIVLKDDFIEAR----LLRAEALVQMQQYKEAMEDIDTILAQDPEDESAILLRGKI 205

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVE 326
             +   K KAE   +K+ ++NP  E A +Y    ++        ++      E+N    E
Sbjct: 206 EEATGNKEKAESSYQKVTELNPFNEQAFLYLGQLYITQNKLAEAIELFTEATELNPNFAE 265

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +     +  L  G  + +       +++ P++
Sbjct: 266 AYHERGRAKLLNGDKEGSAEDMKKGLELNPKE 297


>gi|241661899|ref|YP_002980259.1| tetratricopeptide repeat-containing protein [Ralstonia pickettii
           12D]
 gi|240863926|gb|ACS61587.1| Tetratricopeptide domain protein [Ralstonia pickettii 12D]
          Length = 645

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 22/208 (10%)

Query: 191 TEAVVQQY---VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +A++Q       + + + A+  L +    + +  R    L +AR+       D   +  
Sbjct: 196 ADALLQLQQQMSKSSDPAGAVGALQR--IASHDMQRPETHLALARAK--VAAKDTAGALT 251

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302
           +   +LKL      A+I AA+ L + +    A   L    K  P     H  +A +Y  +
Sbjct: 252 ELDTALKLRPGYEDAAILAAE-LRADSDPDAAITGLRSFLKAAPASIDGHLALARMYL-V 309

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKE 359
            ++    + +    L++I        + +  + L+    D A         A   +P   
Sbjct: 310 RNQQDKARAE-FETLKKIAPNDARITLALGLLNLQQRQYDDAERYLKEYVTATAKSPTLS 368

Query: 360 ---IFLLLAQIEQANSHNTDKILYWTQS 384
               +  LAQ+ +    +    L W   
Sbjct: 369 PEPGYQGLAQLAE-EKRDYAGALGWVDK 395



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 90/272 (33%), Gaps = 8/272 (2%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +   + + +  +L  +++L       A+     + Q      FA  +             
Sbjct: 86  RVALNEDIMYRVLASEVSLQRGLVEPAYRTYLALAQDTRDPRFAQRATEIAFLTRS-PAQ 144

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A   A   +++SP +    +      V   +WS     L  +        R  A+L + +
Sbjct: 145 AMTAARLWVELSPTSMPARQVQQLLLVATGQWSEVEPMLQAQLNKVSPGQRADALLQLQQ 204

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291
            +  +            I S  +       +  A A++ ++      A   L+   K+ P
Sbjct: 205 QMSKSSDPAGAVGALQRIASHDMQ---RPETHLALARAKVAAKDTAGALTELDTALKLRP 261

Query: 292 -HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            + + A +   L +++     +       +    S++  + ++++ L     D+A A+  
Sbjct: 262 GYEDAAILAAELRADSDPDAAITGLRSFLKAAPASIDGHLALARMYLVRNQQDKARAEFE 321

Query: 350 LAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
              KIAP    I L L  +        D   Y
Sbjct: 322 TLKKIAPNDARITLALGLLNLQQRQYDDAERY 353


>gi|55670588|pdb|1W3B|A Chain A, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
           Reveals Structural Similarities To Importin Alpha.
 gi|55670589|pdb|1W3B|B Chain B, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
           Reveals Structural Similarities To Importin Alpha
          Length = 388

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 85  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 142

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 143 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 197

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 198 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 253

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  +   A    A +L  +    +AE       ++ P H +  N   +
Sbjct: 254 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 313

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A+RL         E   +   ++ +  + G + +A      A++I+P 
Sbjct: 314 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 371



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 40/252 (15%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNR 223
              G L  A  +   AL + PD       +    V A +   A+       +   + +  
Sbjct: 78  KERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCV 137

Query: 224 NRAILLIARSLENADKGDMI-----------------------------ASYHDAIESLK 254
              +  + ++L   ++                                  + H   +++ 
Sbjct: 138 RSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 197

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENTV 308
           L  N + A I     L       +A     +   ++P     H  +A +Y    L +  +
Sbjct: 198 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAI 257

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
              +RA+ L        ++   ++    E GS+ +A      A+++ P   +    LA I
Sbjct: 258 DTYRRAIEL---QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANI 314

Query: 368 EQANSHNTDKIL 379
           ++   +  + + 
Sbjct: 315 KREQGNIEEAVR 326


>gi|71276208|ref|ZP_00652487.1| TPR repeat [Xylella fastidiosa Dixon]
 gi|71900467|ref|ZP_00682598.1| TPR repeat [Xylella fastidiosa Ann-1]
 gi|170730700|ref|YP_001776133.1| tetratricopeptide repeat protein [Xylella fastidiosa M12]
 gi|71162969|gb|EAO12692.1| TPR repeat [Xylella fastidiosa Dixon]
 gi|71729773|gb|EAO31873.1| TPR repeat [Xylella fastidiosa Ann-1]
 gi|167965493|gb|ACA12503.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 392

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/389 (12%), Positives = 112/389 (28%), Gaps = 44/389 (11%)

Query: 60  AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107
               F     A L   +  R      G+  +         GL  + +     A ++    
Sbjct: 7   WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 66

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163
           + + ++       L +L   +      + + A    + + + P      + FA+ +L  +
Sbjct: 67  AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 121

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222
             + G L+ A+   T+   I   AP     ++  Y   ++W +AI   +  +    +   
Sbjct: 122 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVATGEPMG 181

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +  A      +           +      + +    S+ A I   +          A   
Sbjct: 182 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRAGIIEGRIEADLGHHEAAVRA 241

Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333
            E+  + +P       P +   Y  +        +  A        E    +   + +++
Sbjct: 242 WERAARHDPEYLPEIIPALLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 295

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391
           +        QA       +K  P       L  +  A+  +    LY  +     +   +
Sbjct: 296 LIESQEGSAQARGYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 355

Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417
           P +       G  +  W    P  K    
Sbjct: 356 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 382


>gi|332992390|gb|AEF02445.1| hypothetical protein ambt_04475 [Alteromonas sp. SN2]
          Length = 937

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 85/263 (32%), Gaps = 22/263 (8%)

Query: 107 HSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYS 159
            +          E       L+  Q+ +A +Q   A        E +++ P +       
Sbjct: 330 TAAKDFSAYLQKEPEDLQAVLMLSQVYMATQQDKQALLLLERYQEPLMENPDSALM---- 385

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R      A+R      +  PD   +    ++      +  +A++ L +      
Sbjct: 386 LGDLFIRQKKSFKAERLLRNLEEKYPDEGKLQLFKIKLMAARGKQEQALSILQENL---- 441

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 A  L   SL N        +   A    KL  +        A  LI Q +   A
Sbjct: 442 PKYTQNAGFLFTYSLMNLQAERFEPALEGANLLNKLFPDEAEVYNLKAGILIRQGQLEAA 501

Query: 280 EVILEKIWKVNPH--PE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +  +EK  + NP   P    +A   + L + +    L     L  ++ +  E+L++ +  
Sbjct: 502 KENIEKALEQNPTLFPAKFNLAATESRLGNVDESNVL--VEELLILSPQHSETLMLKAFN 559

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
             + G ++ A    +  + + P 
Sbjct: 560 MTKQGYVEPAKQIYLDVLTLDPS 582



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 105/277 (37%), Gaps = 30/277 (10%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL SIA  N  L        +         + + L+ Q+A  +   + A   L+  L   
Sbjct: 173 GLASIALQNEELVEANQLIQNAISIEPENAISWRLKGQLAYRQGDKDAATANLQKALTFN 232

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+ +L        D ++A+ +  + ++ +P+ P     ++  ++ +++   AI  
Sbjct: 233 RNDPIALRNLVDLYLEAKDYDTAKLFVDEIIEDTPNDPLA--ILLNSWLQSRDNKEAID- 289

Query: 211 LNQKKKNAKEWNRN--------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            N+K K   ++           + +LL    L N    +M  +  D    L+     + A
Sbjct: 290 -NKKLKELNDFMAQLDPELITSQPMLLYISGLTNFFNNNMETAAKDFSAYLQKEPEDLQA 348

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP---HPE----IANIYTHLLSENTVGKLKRAL 315
            +  ++  ++  + ++A ++LE+     P   +P+    + +++          +L    
Sbjct: 349 VLMLSQVYMATQQDKQALLLLER--YQEPLMENPDSALMLGDLFIRQKKSFKAERL--LR 404

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            LEE   +  E  + + KI L       A  K   A+
Sbjct: 405 NLEEKYPD--EGKLQLFKIKLMA-----ARGKQEQAL 434


>gi|88705969|ref|ZP_01103677.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88699683|gb|EAQ96794.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 389

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 78/253 (30%), Gaps = 33/253 (13%)

Query: 194 VVQQYVLAKEWSRAITFL--------------NQKKKNAKEWNRNRAILLIARSLENADK 239
           +V+ Y    EW RAI                    + + +      A      +LE A++
Sbjct: 135 LVEIYRSESEWQRAIDEAKALLPKRSLLGGEAQAPQLSGQPIPVQLAHFYCELALEVAEE 194

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHP 293
           G    +     E+L+       AS+   +   +    R A      ++E    +     P
Sbjct: 195 GRSDDARAMLQEALRSDPACARASLELGRIEGAAGNHRPAIEALTRVVEQHAEFLPEAIP 254

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI--DQAHAKAMLA 351
            +   Y  L  E+ +        L     E   + ++++           D AH      
Sbjct: 255 ALRECYAALGEEDALS-----AYLRRCLDEHPSTPLMIAVADDIRRDEGNDAAHEFLAHR 309

Query: 352 MKIAPRKEIFLLLAQIEQ----ANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWL 406
           +  AP     L L +I+Q        ++  +L      L  +  P +  D  G+ +   L
Sbjct: 310 LAEAPSLRGLLRLIRIQQEDKPGTPGDSLAMLGVLLDRLIEVR-PAYRCDHCGFSARHLL 368

Query: 407 PLSPISKTLCYFE 419
              P  K    F 
Sbjct: 369 WFCPGCKYWGTFR 381


>gi|30261614|ref|NP_843991.1| TPR domain-containing protein [Bacillus anthracis str. Ames]
 gi|47526814|ref|YP_018163.1| TPR domain-containing protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49184446|ref|YP_027698.1| TPR domain-containing protein [Bacillus anthracis str. Sterne]
 gi|65318884|ref|ZP_00391843.1| COG0457: FOG: TPR repeat [Bacillus anthracis str. A2012]
 gi|165869318|ref|ZP_02213977.1| TPR domain protein [Bacillus anthracis str. A0488]
 gi|167633410|ref|ZP_02391735.1| TPR domain protein [Bacillus anthracis str. A0442]
 gi|167639113|ref|ZP_02397386.1| TPR domain protein [Bacillus anthracis str. A0193]
 gi|170686154|ref|ZP_02877376.1| TPR domain protein [Bacillus anthracis str. A0465]
 gi|170706452|ref|ZP_02896912.1| TPR domain protein [Bacillus anthracis str. A0389]
 gi|177650519|ref|ZP_02933486.1| TPR domain protein [Bacillus anthracis str. A0174]
 gi|190568687|ref|ZP_03021592.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|227815634|ref|YP_002815643.1| TPR domain protein [Bacillus anthracis str. CDC 684]
 gi|229604256|ref|YP_002866022.1| TPR domain protein [Bacillus anthracis str. A0248]
 gi|254683106|ref|ZP_05146967.1| TPR domain protein [Bacillus anthracis str. CNEVA-9066]
 gi|254734455|ref|ZP_05192167.1| TPR domain protein [Bacillus anthracis str. Western North America
           USA6153]
 gi|254740866|ref|ZP_05198554.1| TPR domain protein [Bacillus anthracis str. Kruger B]
 gi|254755104|ref|ZP_05207138.1| TPR domain protein [Bacillus anthracis str. Vollum]
 gi|254759641|ref|ZP_05211665.1| TPR domain protein [Bacillus anthracis str. Australia 94]
 gi|30255842|gb|AAP25477.1| tetratricopeptide repeat protein [Bacillus anthracis str. Ames]
 gi|47501962|gb|AAT30638.1| TPR domain protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178373|gb|AAT53749.1| TPR domain protein [Bacillus anthracis str. Sterne]
 gi|164714758|gb|EDR20276.1| TPR domain protein [Bacillus anthracis str. A0488]
 gi|167512903|gb|EDR88276.1| TPR domain protein [Bacillus anthracis str. A0193]
 gi|167531448|gb|EDR94126.1| TPR domain protein [Bacillus anthracis str. A0442]
 gi|170128550|gb|EDS97417.1| TPR domain protein [Bacillus anthracis str. A0389]
 gi|170669851|gb|EDT20592.1| TPR domain protein [Bacillus anthracis str. A0465]
 gi|172083663|gb|EDT68723.1| TPR domain protein [Bacillus anthracis str. A0174]
 gi|190560287|gb|EDV14267.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|227007196|gb|ACP16939.1| tetratricopeptide repeat protein [Bacillus anthracis str. CDC 684]
 gi|229268664|gb|ACQ50301.1| TPR domain protein [Bacillus anthracis str. A0248]
          Length = 420

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|319793868|ref|YP_004155508.1| cellulose synthase operon c domain protein [Variovorax paradoxus
           EPS]
 gi|315596331|gb|ADU37397.1| cellulose synthase operon C domain protein [Variovorax paradoxus
           EPS]
          Length = 1449

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 18/227 (7%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD  +A++   +AL    D P     +    +  + +  A   L +  + +     
Sbjct: 301 ALDRGDPATAEQRFQQALRTKADDPEALGGLGLVRLRQERFGEAQELLERAARGSGGSKW 360

Query: 224 NRAI------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           N A+       L+ ++    +K D   +      ++++     +  +  A    +  +  
Sbjct: 361 NSALQSATYWSLVGQARAAREKNDARGAQSLLERAVRIDPRESVGQVALADLRAAAGELP 420

Query: 278 KAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKR------ALRLEEINKESVE 326
           +AE   +++ +  P        +  +Y      +    L R      A +L  +    VE
Sbjct: 421 QAEQGYKRVLESKPSDTQALRGLIAVYGRQGRADEALALARQLTPEQASQLSGLRDIQVE 480

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANS 372
                ++   + G    A      AM  AP      L LA I +   
Sbjct: 481 QARAKARQQADAGDAPGAQRTLEDAMLAAPDSPWVRLDLANIYRRQG 527



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 99/328 (30%), Gaps = 33/328 (10%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           LY   ++   ++  ++ ++ +  S +        V L E   AL       A ++ +  L
Sbjct: 259 LYQDYLASNPNDAAVSARLETLTSGKTAAAASPGVPLGEGFRALDRGDPATAEQRFQQAL 318

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW---VTEAVV-----QQYV 199
           +  A    A+  L     R      AQ    +A   S  + W   +  A       Q   
Sbjct: 319 RTKADDPEALGGLGLVRLRQERFGEAQELLERAARGSGGSKWNSALQSATYWSLVGQARA 378

Query: 200 LAK--EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             +  +   A + L +  +     +  +  L   R+               A +  K   
Sbjct: 379 AREKNDARGAQSLLERAVRIDPRESVGQVALADLRAAAGE--------LPQAEQGYKRVL 430

Query: 258 NSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNPH--------PEI------ANIYTHL 302
            S  +   A + LI+   ++ +A+  L    ++ P          +I      A      
Sbjct: 431 ESKPSDTQALRGLIAVYGRQGRADEALALARQLTPEQASQLSGLRDIQVEQARAKARQQA 490

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            + +  G  +          +S    + ++ I    G + +A       +   P     L
Sbjct: 491 DAGDAPGAQRTLEDAMLAAPDSPWVRLDLANIYRRQGLVAEARGVMEGLLMSQPDMPDAL 550

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMP 390
             + +  + S +    + + +    A  
Sbjct: 551 YASALLASESGDAAGGIQYLERIPAASR 578



 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 17/200 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEM-----MLQIPA 151
            + P A  M   +  +    N  +   LL   + L  +Q       L       M     
Sbjct: 641 GDAPRALAMSRQLLAR--SPNPGIGDRLLYASVLLKTKQDVELSAVLRQLQPAGMTAAQR 698

Query: 152 TREFAVYSLYFE----SCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           +   ++   +      + R  G+L +A       L   PD P    A+ + Y  A++ ++
Sbjct: 699 SDFDSLRIAFALRQTDALREAGNLEAAYNAMAPVLAERPDDPRAMAALARLYSAARDETQ 758

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+    +  + +            A +   +       + +  + +LK   +       A
Sbjct: 759 ALALYQRVLQRSPTDLDALL----AAAASASALRQHSEAENYVMAALKQAPDQSRVLAAA 814

Query: 267 AKSLISQNKKRKAEVILEKI 286
            +   +    RKAE  L   
Sbjct: 815 GRVYRNAGDSRKAEQYLRAA 834



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 107/354 (30%), Gaps = 70/354 (19%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A + P A++  +         +   V L    I   +     A   +E +L        A
Sbjct: 492 AGDAPGAQR--TLEDAMLAAPDSPWVRLDLANIYRRQGLVAEARGVMEGLLMSQPDMPDA 549

Query: 157 VYSLYFESCRIGDLNSAQRYATK---------ALDISPDAPWVTEAVVQQYVLA--KEWS 205
           +Y+    +   GD     +Y  +            +     W      +   LA   +  
Sbjct: 550 LYASALLASESGDAAGGIQYLERIPAASRTRDMAALQRRL-WAQSQAQRAQALARQGQVD 608

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-------- 257
            A   L Q    A   +   A L    +   A+ GD   +   + + L            
Sbjct: 609 AARQVLGQA--EAALSSDMPAELWGQLAGAYAEIGDAPRALAMSRQLLARSPNPGIGDRL 666

Query: 258 --------------------NSIMASICAAK-----------SLISQNKKRKAEVILEKI 286
                                   A + AA+           +L   +  R+A   LE  
Sbjct: 667 LYASVLLKTKQDVELSAVLRQLQPAGMTAAQRSDFDSLRIAFALRQTDALREAGN-LEAA 725

Query: 287 WKV-NP----HPE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +    P     P+       +A +Y+    E     L    R+ + +   +++L+  +  
Sbjct: 726 YNAMAPVLAERPDDPRAMAALARLYSAARDETQA--LALYQRVLQRSPTDLDALLAAAAS 783

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           A  +    +A    M A+K AP +   L  A     N+ ++ K   + ++A+ A
Sbjct: 784 ASALRQHSEAENYVMAALKQAPDQSRVLAAAGRVYRNAGDSRKAEQYLRAAVDA 837


>gi|85716815|ref|ZP_01047781.1| Tetratricopeptide [Nitrobacter sp. Nb-311A]
 gi|85696313|gb|EAQ34205.1| Tetratricopeptide [Nitrobacter sp. Nb-311A]
          Length = 736

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 12/243 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  D+  A+    +A    P    +  ++ Q  +  K W+ A    +   K  +    +
Sbjct: 454 QRRDDVTHAEHVLIEASGRYPQNLQLLSSLAQIKLSQKNWTGAAAVADAVGKLGEGRVLS 513

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             I    R+L  A +G +  S     ++ +    ++   +    + + Q K  KA  +L+
Sbjct: 514 DQI----RALALAGQGKVDESIAALEDAHQAAPTALQPVVSLVSAYVKQGKPEKAASLLQ 569

Query: 285 KIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +I     +PE + I        L     V  ++           S E    +S + +   
Sbjct: 570 EI--SQKYPENSQILVLLGKVQLGQNKDVDAIQSFKNATAKQPNSPEGYAALSDLYIRQK 627

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399
           + D A +     +K  P      LL    Q    + D  +   +S L A P+   ++ + 
Sbjct: 628 NYDAAESVLQAGLKQMPADLNLQLLYAGLQILKGDHDAAISQYESILRARPNAA-VAVNN 686

Query: 400 YLS 402
            +S
Sbjct: 687 LVS 689



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            + +++ P        + +  V       A+  +   K++        A L   ++L   
Sbjct: 91  RRIVELDPSDLDARLKLARIMVSGGAVDGALKVIEVAKEDKPS-----AALHALKALILL 145

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--- 294
              D   +  +A  + ++   ++ A    A   + +     +  +LE +  V P  E   
Sbjct: 146 KTNDSAGAVREAQRAFEIDPTNVDAVSLLASKKLFEGDADGSLKLLESL-AVAPQDETRI 204

Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +  +  +    +     +   R+  +N +       + ++ +     D+A  +    + 
Sbjct: 205 SLLRMQAYARKGDLAKAEELLRRIISLNPKEPSYQSQLIQLLIAQRRFDEAEKELRTRVS 264

Query: 354 IAP 356
             P
Sbjct: 265 ANP 267



 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 81/237 (34%), Gaps = 14/237 (5%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKA 180
             L   +I ++    + A + +E+  +  P+    A+ +L     +  D   A R A +A
Sbjct: 103 ARLKLARIMVSGGAVDGALKVIEVAKEDKPSAALHALKALIL--LKTNDSAGAVREAQRA 160

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            +I P        +  + +   +   ++  L       ++  R   + + A +     KG
Sbjct: 161 FEIDPTNVDAVSLLASKKLFEGDADGSLKLLESLAVAPQDETRISLLRMQAYAR----KG 216

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EI 295
           D+  +       + L            + LI+Q +  +AE  L      NPH      ++
Sbjct: 217 DLAKAEELLRRIISLNPKEPSYQSQLIQLLIAQRRFDEAEKELRTRVSANPHDSKIALDL 276

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              +  L       + +   +L ++  +  +  + ++++ +       A        
Sbjct: 277 VR-FLSLAKGPEAARTE-LDKLIKVGGDVFDYEMALAQLDVSQNKSTDAIQSLQKLA 331


>gi|253702417|ref|YP_003023606.1| hypothetical protein GM21_3831 [Geobacter sp. M21]
 gi|251777267|gb|ACT19848.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 1034

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 58/218 (26%), Gaps = 35/218 (16%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                 A  +   A      +L+          +L       G    A++   +AL++ P
Sbjct: 569 RANALRAAGELPGAVALYRRLLERLPACAEIHNNLGLALQDQGLDTEAEQSFRRALELKP 628

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +       +    V   E   A+ F  +  +  + +    A   +   L+  ++     +
Sbjct: 629 ELADAHNNLGTLLVARGEHEGALPFFEKALELREGY--LPAYANLGSCLQVLEE--PERA 684

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                 ++ L      A I    +     +  KA  +                       
Sbjct: 685 VELYRRAIALDPGFFEARINLGTAYQDLMQPEKAIEV----------------------- 721

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                      L E+  E  E+   ++   L +G   +
Sbjct: 722 --------YRELLELAPEHPEAHWNLALSLLSVGDFKR 751



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 62/207 (29%), Gaps = 24/207 (11%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL++    N+  A +  S  +       E    +           ++ A          
Sbjct: 40  DGLLAYRRGNLEEALQAFSRAAFLQPESAELRNNV--GVAYQDLNCHDSAALHFRE---- 93

Query: 150 PATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
                 ++   Y E+          +GD   A R    A+  +P        +       
Sbjct: 94  ----ALSLRGEYPEARCNLATALLHLGDAEEAIRNYCDAIAAAPGYADAYHLLGNALRRQ 149

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            EW  A+    +  +   +    + ++ +  SL   ++ D   +      +L +  + + 
Sbjct: 150 GEWEGAVQCYQKALE--LDPQNLKTLVNLGGSLFTLNRFDEAIAAQ--RRALSIDPDHVD 205

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWK 288
           A    A  L++    ++     E  W+
Sbjct: 206 AHWNLALVLLTTGNYQEGFR--EYQWR 230


>gi|166710178|ref|ZP_02241385.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 421

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 113/361 (31%), Gaps = 31/361 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   YR +    L +L   +    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K    KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWDKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYF----ESCRIGDLNS 172
            L     V++A A      A    + +     T          L      E+    D  +
Sbjct: 120 ALAS--AVRVADARGDEAAATALAQQLAVRDPTAYALLQGERHLARQRPVEAINALDSAN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +       T A+ Q     + + +      Q   +   ++   A L    
Sbjct: 178 AQPLPARGLLLR------THALTQIGRADEAYGQLGALRQQAVLSPDAYSALEATLAEQT 231

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            L+ +D   +   +    ++L+ C   + A +  AA            E  L+  W  + 
Sbjct: 232 LLQASDANALAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDES- 290

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +Y  L  E    +   A R      +S   L+ ++++A       QA      A
Sbjct: 291 ---LVRLYGVLPLEKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347

Query: 352 M 352
           +
Sbjct: 348 I 348


>gi|298531121|ref|ZP_07018522.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509144|gb|EFI33049.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 1016

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 24/206 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           + L   +  L + +   A +  E        +  A+  L     + G+ + A  +  KA 
Sbjct: 311 ILLPGARAYLQKGRLEDAQKLFEKASGHENLKVQALPGLARVEMKRGNPDKAVYFLEKAA 370

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            +  + P     + Q      +       + +  K   +       +L   +   A +G+
Sbjct: 371 ALDENNPEPFILLSQTRGKPLQ-----EHVEKVLKEETDP-----AVLTHLAQALAGQGE 420

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +      +L        A    A+   S+   R +  +           EI ++   
Sbjct: 421 FELAAEVYDSALAHDPGFFEAGAGLAEVYGSKG--RYSASL-----------EILDMMLE 467

Query: 302 LLSENTVGKLKRALRLEEINKESVES 327
              E+    L RA  L   +++  ES
Sbjct: 468 EFPESYKLLLTRARVLA-WSRQYAES 492


>gi|219847542|ref|YP_002461975.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219541801|gb|ACL23539.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
          Length = 1112

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 88/317 (27%), Gaps = 38/317 (11%)

Query: 85   YKALYTGLM-----SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
            Y+ L    +       AA       +  +  +     +      L    IA        A
Sbjct: 785  YQLLARAYLIGNRLEAAAQEALQTLQRTANRNDPEAVNARVNALLTLADIARRRNDSAAA 844

Query: 140  HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI------SPDAPWVTEA 193
             +    +L +      A   L   +   G    A  Y   A+ +      +    W+ E+
Sbjct: 845  EDYYRQVLAVDPQSIAAHIGLGELAGEQGQWGIALGYFETAVALPGGDTNATAQFWLGES 904

Query: 194  VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            ++     + + +RA T   +  +    +       L+  +      G   A+     ++L
Sbjct: 905  LL----RSGQLARARTAYQRALELQPIYPE----ALLGLAQTQHALGQADAALQTVEQAL 956

Query: 254  KLCDNSIMASICAAKSLISQNKKRKA-----------EVILEKIWKVNPHPEIANIYTHL 302
                N   A +   K L    +  +A           + I E  ++             +
Sbjct: 957  HQRSNYAEAHLFRGKLLQEAGRFAEARAAYDAAIGTNDRIAESFYR--------RALLAI 1008

Query: 303  LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
               +    ++   R   +     E+   + +     G I+ A      A+ + P     +
Sbjct: 1009 RDNDYDQAIRDLNRTVTLQPNFPEAYYWLGRAYYTQGRIENAQQAIERAITLNPDYSEAI 1068

Query: 363  LLAQIEQANSHNTDKIL 379
              + +   +  N     
Sbjct: 1069 FYSGLIAEDRANVAAAR 1085



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 80/244 (32%), Gaps = 15/244 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
           ALA      A       L+       A  +L   +   GD  +A  +  A  A   SP  
Sbjct: 555 ALARNDRERAVTAFRSALERNNRFFPAHVALARLAEADGDWPAAIEHWRALVAWQESPYT 614

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             V  A   +      ++ A   L              A   I  +    D G    +  
Sbjct: 615 A-VNLARALRRSGVSGFAEAERIL-------VPLATTSAEAAIELARLYNDAGYPKEAAA 666

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
             +++L L   S +A+    ++ I   +  +AE  L      +     A +    L E  
Sbjct: 667 VYLDALTLDPRSTVAAFELGETYIRLGELTEAERRLRDAITFDERNLDARLRLAELYEGP 726

Query: 308 VGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFL 362
           + +  RA+    I        +  L+ + + AL + +   A      A+++ P     + 
Sbjct: 727 LNQPNRAIDQYRIALGQGVNDLNQLIAIGQAALNVNTATVAIQALERALQLNPDSVTTYQ 786

Query: 363 LLAQ 366
           LLA+
Sbjct: 787 LLAR 790


>gi|319761487|ref|YP_004125424.1| pep-cterm system tpr-repeat lipoprotein [Alicycliphilus
           denitrificans BC]
 gi|317116048|gb|ADU98536.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus
           denitrificans BC]
          Length = 926

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 85/273 (31%), Gaps = 19/273 (6%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++    +  L        S +    +  L+        L ER+   A + ++++ +    
Sbjct: 416 LASGKGDAALGELRSIAASDEGVVADMALIN-----ALLQERKVEEALKAIDLLEKKRPA 470

Query: 153 REFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 +        +  D   A++   +AL+I P        +       K    A   
Sbjct: 471 DVLPVFLRGRALLLKQ--DTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +    K      +   +L+  R+   AD+ ++      A++        I   +      
Sbjct: 529 IEAAIKRDPGNVQAYMVLMELRAANGADRAELAGILRKAVDGAPSSP--IPRQLLV-DHY 585

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
           +   + ++A  + ++       P+ A ++  L      +      L    R+  +  +S 
Sbjct: 586 LRGGETKEALAVAQQAVAAL--PDNAQLFDALGRAQSANGEHNQALASFNRMAALQPQSP 643

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              + ++   L  G    A      A++I P  
Sbjct: 644 VPYLRMAGANLIAGDRTAAGQSWRKALEIDPTA 676



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 121/397 (30%), Gaps = 26/397 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREF 155
            +   A+       +    +   L+   + +  +     + A   L  + +         
Sbjct: 146 GDEAKAQGSLGEALKAKADYAPALIE--QARSKVRGGDVDGALAGLGQIPRQSPVGAEAL 203

Query: 156 AVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +   +   S R  D ++A      AL++ P       A+V+  +   + + A   L   
Sbjct: 204 KLRGDILLHSKR--DADAAMAAYRDALEVKPSYVEGQAAIVELLISQGKTTAAAESLQAL 261

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +K A      R   L  +++    KGD  A+     + +++   S  A   A  + +   
Sbjct: 262 EKAAP----GRPQTLYLQAMLAYTKGDFKAAQESVQKLVRMAPESARALELAGMTDLQLG 317

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES------- 327
              +AE  L K  ++NP               +  +L R  +        ++        
Sbjct: 318 ANAQAEASLAKALQLNP----GLAMARRGLVTSYMRLGRLDKAIATLPSDIDGNDRDPGM 373

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           L +  +  +  G +D+A      A ++ P   +      +    S   D  L   +    
Sbjct: 374 LGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALGELR--SI 431

Query: 388 AMPDPLWISDDGYLSS--VWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPA 445
           A  D   ++D   +++      +    K +   E K P                +    A
Sbjct: 432 AASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLKQDTAGA 491

Query: 446 DDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIR 482
                        + P+   ++  +++   P D   R
Sbjct: 492 RKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528



 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 93/321 (28%), Gaps = 47/321 (14%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + AL     +   HN  LA    S+           + YL      L       A +   
Sbjct: 612 FDALGRAQSANGEHNQALA----SFNRMAALQPQSPVPYLRMAGANLIAGDRTAAGQSWR 667

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             L+I  T   A   L   +        A   +       P          + ++  K W
Sbjct: 668 KALEIDPTALEAQQGLVRLAMADRKSGDALAMSRTVQKQRPKEAAGYALEGEIHMAEKAW 727

Query: 205 SRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +AI       K    + +   R   +L+ A     AD+         A ++       +
Sbjct: 728 DKAIDVFRVGLKQVPASGELAVRLHEVLVTAGKKSEADRLAAEWQRSHAKDAT--FPLYL 785

Query: 261 MASICAAKSLIS---------QNKKRKAEVILEKIW------------------KVNP-H 292
                AAK L             +   A  +    W                   + P  
Sbjct: 786 GTRALAAKDLPESLRQYERAVALQPNNAIALNNMAWIKGQLGRDGALADAERANALAPNQ 845

Query: 293 PEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           P   + +  LL  +   +  RA     R+ ++  + +E  + ++KI ++ G  D A A  
Sbjct: 846 PAFMDTWAMLL--SAASQHARAVDLQKRVVQLRPQQLEFKLNLAKIYIKAGQKDAAKAVL 903

Query: 349 MLAMKIAPRKEIFLLLAQIEQ 369
                   R   F   A++E+
Sbjct: 904 DELAAAGAR---FPAQAEVEE 921



 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 120/330 (36%), Gaps = 40/330 (12%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAV 157
                   S  + +           L+  +A  +  +  A E ++ ++++   + R   +
Sbjct: 249 GKTTAAAESLQALEKAAPGRPQTLYLQAMLAYTKGDFKAAQESVQKLVRMAPESARALEL 308

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL------ 211
             +     ++G    A+    KAL ++P        +V  Y+      +AI  L      
Sbjct: 309 AGMTD--LQLGANAQAEASLAKALQLNPGLAMARRGLVTSYMRLGRLDKAIATLPSDIDG 366

Query: 212 ---------------------NQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247
                                ++ ++     +R   N A++  + ++ +   G   A+  
Sbjct: 367 NDRDPGMLGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALG 426

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLS 304
           + + S+   D  ++A +    +L+ + K  +A   ++ + K  P    P        LL 
Sbjct: 427 E-LRSIAASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLK 485

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363
           ++T G  K   R  EI+     +  +++ +       D A A+   A+K  P   + +++
Sbjct: 486 QDTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARARIEAAIKRDPGNVQAYMV 545

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L ++  AN  +  ++    + A+  A   P
Sbjct: 546 LMELRAANGADRAELAGILRKAVDGAPSSP 575



 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 89/274 (32%), Gaps = 17/274 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIP 150
           + +I +  +  A  +   +       ++    +   Q  L+      A  +L+  +   P
Sbjct: 1   MTAITSRTLVPAAALTVALLMSACGRDDPDALVASAQDYLSRNDAPAAIIQLKNALQSRP 60

Query: 151 ATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            + +     L  ++    GD   A+    KA D+      V   +    + ++++S+   
Sbjct: 61  DSAKA--RLLLGQALLDTGDAQGAETEFRKAQDLGVPPAEVVPQLALALLRSRQYSK--- 115

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
             +          + +A L    ++    +GD   +     E+LK   +   A I  A+S
Sbjct: 116 ITSDYAGQQLADAQAQASLQTTLAIAWQRQGDEAKAQGSLGEALKAKADYAPALIEQARS 175

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-------NTVGKLKRALRLEEINK 322
            +       A   L +I + +P   +      L  +       +    +       E+  
Sbjct: 176 KVRGGDVDGALAGLGQIPRQSP---VGAEALKLRGDILLHSKRDADAAMAAYRDALEVKP 232

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             VE    + ++ +  G    A        K AP
Sbjct: 233 SYVEGQAAIVELLISQGKTTAAAESLQALEKAAP 266


>gi|271500232|ref|YP_003333257.1| tetratricopeptide domain-containing protein [Dickeya dadantii
           Ech586]
 gi|270343787|gb|ACZ76552.1| tetratricopeptide domain protein [Dickeya dadantii Ech586]
          Length = 389

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 92/290 (31%), Gaps = 54/290 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  +++  +   E    LL VQ      +    Y+ A E  + ++     R
Sbjct: 83  GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMVAGLYDRAEEIFKQLVDEEDFR 140

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+                                  + ++Q +    +W  AI    +
Sbjct: 141 VSAL----------------------------------QQLLQIHQSTSDWPNAIDTAEK 166

Query: 214 KKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K  +    A     ++L+     D+  +     ++          SI   +  ++
Sbjct: 167 LVKLGKTQFRSEIAHFYCEQALQAMGSDDLDKALAMLKKASAADSQCARVSIMLGRIYMA 226

Query: 273 QNKKRKAEVILEKIWK------VNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESV 325
           Q    +A  +L+++ +          P +   Y HL   E     L+R     E    S 
Sbjct: 227 QQNYTQAVTLLQQVLEQDTELVSETLPMLQECYRHLQQPEGWAAFLRRC---VEEKSGST 283

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373
            + ++++ +  +  S + A       ++  P   +F  L    + +A   
Sbjct: 284 -ADLMMADVLEQYESTESAQTYVTRQLQRHPTMRVFHRLIDYHLREAEDG 332


>gi|209525407|ref|ZP_03273947.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209494087|gb|EDZ94402.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 370

 Score = 53.4 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 120/352 (34%), Gaps = 22/352 (6%)

Query: 36  LYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSI 95
           +++T+  ++ ++L        ++ AV++     P +L     + N ++    L  G   +
Sbjct: 1   MFKTTKLLVSNVLLAIAATVFVVPAVAQ----PPQILAQATSQANINQLNDLLQKGRDLV 56

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            + N+  A  ++    Q  +   +    L  VQ       +  A +     + +      
Sbjct: 57  NSGNMDEALNVYLQAVQLDSSDAKIYSALAYVQA--LRGDFEAAAKFYRDAITLDPQNAD 114

Query: 156 AVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             Y L Y  +       +AQ Y  +A  +  D       +       +++  AI      
Sbjct: 115 FYYGLGYTLARLQDYPAAAQAY-RRATQLQRDNINAHLGLAASLFRQQDYRGAIQAYQAA 173

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
              A E N   A    +  +    +G+   S     ++++L  N     +    + + Q 
Sbjct: 174 L--ALEPNSWEAN--ASMGMAWLRQGNASQSLQFLQQAMELAPNQPNIYLKLGIAYLEQG 229

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            +  A    ++  +++P       +I  I+   L EN  G ++   +   +  + V + +
Sbjct: 230 DRTAALDAFQEAARLSPFNGEIQFQIGEIFR--LQENFEGAMQAYQQALAMEPDLVAANM 287

Query: 330 IVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
            + +I L +     A     +A       P    +L LA  E+         
Sbjct: 288 AIGEIQLRLRDYIGAIVSFRRAADRFADQPSVHYYLGLALKERGGREPQAIA 339


>gi|296105261|ref|YP_003615407.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059720|gb|ADF64458.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 1160

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 77/209 (36%), Gaps = 17/209 (8%)

Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL  Q   AL       A    +    I  +  +AV  L   +    D ++A+RY  +AL
Sbjct: 354 LLIQQGDAALKANNPAQAERYYQQARTIDNSDSYAVLGLGDAAAARKDNDAAERYYRQAL 413

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAKEWNRNRAIL---LIARSLE 235
            +          +   Y       +A   I  L+  ++ + + +  R++    L A++ +
Sbjct: 414 RMDSGNSNAVRGLANIYRAQSP-EKASQFIQSLSASQRRSID-DIERSLTNEQLSAQAEQ 471

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE 294
             ++G    +       L L    +  +   ++ L S  ++ +A+ ++ ++    P  P+
Sbjct: 472 LENQGKYAQAAEVQRRRLALSPGDVWITYRLSRDLYSAGQRSQADTLMRQLASQKPTDPD 531

Query: 295 IANIYTHLL----SENTVGKLKRALRLEE 319
              +Y + L    ++     L     L  
Sbjct: 532 --QVYANGLYLSGNDQDRAALAHLETLPR 558



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 43/158 (27%), Gaps = 8/158 (5%)

Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R        ++    +     + L     A      + A      +LQ     E A+  L
Sbjct: 585 RDSGKEQEAENLLRQQPASTRIDLTLADWAQQRGDLSAAKTAYSGVLQREPQNEDAILGL 644

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWSRAITFLNQ--KK 215
                  GD ++A+    K        P        +        + + A    N    +
Sbjct: 645 TEIYSAQGDKDAARAELAKLPATQNGQPLSLNMQRRIAMAQAGLGDSAAAEKTFNSIIPQ 704

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             ++  +   A++L   +      G    +     +++
Sbjct: 705 AKSQPASMENALVLRDAARFQTQNGQPQQALETYKDAM 742



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 106/333 (31%), Gaps = 29/333 (8%)

Query: 69  PAMLFHMLHKRN---YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LV 122
           PA       +         Y  L  G  + A  +   A + +    +  + ++     L 
Sbjct: 368 PAQAERYYQQARTIDNSDSYAVLGLGDAAAARKDNDAAERYYRQALRMDSGNSNAVRGLA 427

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATK 179
            +   Q      Q+  +    +        R      L  ++ +    G    A     +
Sbjct: 428 NIYRAQSPEKASQFIQSLSASQRRSIDDIERSLTNEQLSAQAEQLENQGKYAQAAEVQRR 487

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L +SP   W+T  + +    A + S+A   L ++  + K  + ++          N   
Sbjct: 488 RLALSPGDVWITYRLSRDLYSAGQRSQA-DTLMRQLASQKPTDPDQVYANGLYLSGNDQD 546

Query: 240 GDMIASYHDAIESL------KLCDNSIMASIC-AAKSLISQNKKRKAEVILEKIWKVNPH 292
              +A       S       +L D      +   A  L    K+++AE +L    +  P 
Sbjct: 547 RAALAHLETLPRSQWNGNIQELADRLQSNQVLDTANRLRDSGKEQEAENLL----RQQPA 602

Query: 293 P---EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               ++    +     + +  K   +  L+    ++ ++++ +++I    G  D A A+ 
Sbjct: 603 STRIDLTLADWAQQRGDLSAAKTAYSGVLQR-EPQNEDAILGLTEIYSAQGDKDAARAEL 661

Query: 349 MLAMKIAPRKEIFLLL---AQIEQANSHNTDKI 378
                    + + L +     + QA   ++   
Sbjct: 662 AKLPATQNGQPLSLNMQRRIAMAQAGLGDSAAA 694


>gi|237756217|ref|ZP_04584781.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691627|gb|EEP60671.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 964

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 66/168 (39%), Gaps = 12/168 (7%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  +I   +   + + +  E + +    +      L     + GD + A  Y  + 
Sbjct: 777 LSKLLLAEIYEKQNDLDNSIKIYEELKENDDVKFK----LAKILLQKGDYDKALTYFKEL 832

Query: 181 LDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           L+  P     ++  + + Y L  +   A+++L    K++   N N A +         +K
Sbjct: 833 LEKHPEKVNEISFYIGKTYYLMNDKKDAVSYLENGTKSS---NYNDAAVSYYLLGMIYNK 889

Query: 240 GDMIASYHDAIESLKLCDNSIMASIC----AAKSLISQNKKRKAEVIL 283
            +   + +  +  + L  +S   +      AAK L+   K+++A  +L
Sbjct: 890 ENPNKALNYFLNGIYLYPSSKDITAKSRIEAAKILLKAEKRKEASCLL 937


>gi|125543209|gb|EAY89348.1| hypothetical protein OsI_10852 [Oryza sativa Indica Group]
          Length = 848

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 15/224 (6%)

Query: 173 AQRYATKALDISPD----APWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           A     +A ++ P            +  + ++  AKE    +  L   +    +      
Sbjct: 293 ALSSFRRACELQPTDVRPHFRAGNCLYALGRHSEAKE--EYLLALEAAEAGGSQSADILP 350

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            + +   +    +G ++ +     E+  LC +   A      +L    + R AE  LE+ 
Sbjct: 351 QIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEA 410

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             + P     H ++ +   H + ++    ++   +  ++    V++L  +  + ++ G  
Sbjct: 411 IFLKPDYADAHCDLGSA-LHAIGDDDRA-VQEFQKAIDLKPGHVDALYNLGGLNMDAGRF 468

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            +A       + I P      L   +       +++     + A
Sbjct: 469 VRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 512



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 5/163 (3%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++ A  + L    H   +      +   + LL         +Y  A + LE  + +   
Sbjct: 358 IAMEAEGMVLGACEHYREAAILCPSHARALKLLGS-ALFGVGEYRAAEKALEEAIFLKPD 416

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A   L      IGD + A +   KA+D+ P        +    + A  + RA     
Sbjct: 417 YADAHCDLGSALHAIGDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYT 476

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +        N  RA L   +++    +G+   +     E+ K+
Sbjct: 477 RVLSIRP--NHWRAQL--NKAVALLGQGESEEAKKALKEAFKM 515


>gi|227329221|ref|ZP_03833245.1| hypothetical protein PcarcW_18557 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 389

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 86/279 (30%), Gaps = 51/279 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  +++  +   E    LL VQ      +A   Y+ A E    ++     R
Sbjct: 83  GEVDRAIRIHQALTESASLTFEQ--RLLAVQQLGRDYMAAGLYDRAEESFNQLVDEEDFR 140

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+                                  + ++Q +    +W  AI    +
Sbjct: 141 RSAL----------------------------------QQLLQIHQATSDWPTAIDVAEK 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L      D+  +     +          ASI   +  ++
Sbjct: 167 LVKMGKDQLRVDIAHFYCELALLAMGSDDLDKALTLLKKGATADSQCARASIMMGRIYMA 226

Query: 273 QNKKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           Q    +A   L       K       P +   Y HL  +  +       R  E N  +  
Sbjct: 227 QQDYSRAVEALRQVLDQDKELVSETLPMLQECYQHL--DKPLDWANFLRRCVEENTGATA 284

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
            L++V  +  E G+ + A A     ++  P   +F  L+
Sbjct: 285 ELMLVDILEREEGA-EVAQAYINRQLQRHPTMRVFHRLM 322


>gi|115372553|ref|ZP_01459861.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|115370515|gb|EAU69442.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
          Length = 1238

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 12/226 (5%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A   A +A   SP    V   ++       + +    FL    K   +  R R  L   
Sbjct: 348 TATVEAERAARASPK--DVGLQLLAAANHRDDLNLRRHFLEAALKVEPDSLRVREKL--- 402

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +    ++             ++   +S  A +  A++  +     +A  ++E+ ++  P
Sbjct: 403 -AEHELERDHPERVLELLQPLVESAQDSASARLVLARAYEALGVSARANTLVEETFRRAP 461

Query: 292 H-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           + P +  A + +    E     L R      +  +   S  +++    +MG +D+A  + 
Sbjct: 462 NVPRVVRAAVASSRKLERQQEVLDRLRVALALRFDDTASRNLLAAQLADMGRVDEAAREY 521

Query: 349 MLAMKIAPRKEIFLL-LAQIEQANSH-NTDKILYWTQSALHAMPDP 392
              + + P      + LA++  +N   +  K  +    AL A  +P
Sbjct: 522 SQLLALNPFDNAARVRLAELRASNGKLDAAKANFAEARAL-APDEP 566



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 1/108 (0%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
            V+    F +     LL  Q+A   R    A E  +++   P      V  L       G
Sbjct: 488 RVALALRFDDTASRNLLAAQLADMGRVDEAAREYSQLLALNPFDNAARVR-LAELRASNG 546

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            L++A+    +A  ++PD P V E   +  + A     A+    +   
Sbjct: 547 KLDAAKANFAEARALAPDEPEVYEREGRALMSAGHRDEALAAFARSLA 594


>gi|170698737|ref|ZP_02889802.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           IOP40-10]
 gi|170136362|gb|EDT04625.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           IOP40-10]
          Length = 754

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 26/270 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +++ A    E + +        T    +      +C++G   +      +A+ +  D 
Sbjct: 18  AGRFDDARVLYEAIRRDEPDQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            ++   +            AI    +    A  +    A           D GD  A+  
Sbjct: 73  VYLNN-LGNMLRAHGRLDDAIGAYRRAIALAPGY----AEAHSNLGNALRDAGDADAAML 127

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTH 301
              ++L L  +          +L  + +   A    EK   ++P    A       +   
Sbjct: 128 SCAQALALRPDYAPGFNNLGNALQDKGELDAAVRAYEKAIALDPGYAQARFNQGNVLRAQ 187

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              ++ +   + A+ L     +   +   +  +  E   ++ A A    A +      +F
Sbjct: 188 RRPDDAIACYREAIAL---QPDLHAAHHALGVLLFERDDLEAAIASLTRAAESGEADCLF 244

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            L A +E+A   +        + AL A PD
Sbjct: 245 HLAAALERAGDLDGTVAS--LRRALVAAPD 272


>gi|16273142|ref|NP_439379.1| tetratricopeptide repeat protein [Haemophilus influenzae Rd KW20]
 gi|148827067|ref|YP_001291820.1| tetratricopeptide repeat protein [Haemophilus influenzae PittGG]
 gi|260581142|ref|ZP_05848962.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1175681|sp|P44130|Y1223_HAEIN RecName: Full=Uncharacterized protein HI_1223; Flags: Precursor
 gi|1574154|gb|AAC22876.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|148718309|gb|ABQ99436.1| hypothetical protein CGSHiGG_01890 [Haemophilus influenzae PittGG]
 gi|260092170|gb|EEW76113.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 396

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE + + NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + ++K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339


>gi|94311679|ref|YP_584889.1| HemY-like protein [Cupriavidus metallidurans CH34]
 gi|93355531|gb|ABF09620.1| uncharacterized enzyme of heme biosynthesis [Cupriavidus
           metallidurans CH34]
          Length = 396

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 51/388 (13%), Positives = 121/388 (31%), Gaps = 15/388 (3%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +RL+ +  V+        + +     +V + +       S  + L++L    F    + +
Sbjct: 1   MRLLFWVAVLFGGAVGLALFTQFNQSNVVLFYPPYRVEMSLNLTLALLLLAFFIVWTVLS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P        +    K   A+   + ++ A     AR   +    Q       
Sbjct: 61  TFRHLSEMPKRAAAYRERSRMSKAQAAMRESIENLFAG--RFARAERAAHEAQAWPEQAQ 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+  + A   ++     +     +  P   +  + S+        D   A     + 
Sbjct: 119 TAALVGARAAHRMQESER-RDAWMAQVTDPEREQARLVSMAELLVDARDAEGALATIAQL 177

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENAD 238
            +       V    ++ +   K WS  +      +K           L  +   ++    
Sbjct: 178 QEKGGRQIHVQRIALRAHQHLKNWSEVLRLARSLEKRNALHPVLALRLKQMAVEAMLEER 237

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           + D  A +H          +++  +   A+   S +K+ +A  I+E+  KVN    +   
Sbjct: 238 RHDAEALFHFWRSLTADERHAVRIAELGARYFSSLDKQNEARRIVEEALKVNWDSRLVQR 297

Query: 299 YTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           Y         + ++++A +    +    +    +  + L      +A +     +K A R
Sbjct: 298 YADCAEPGKALPQIQQAEKWLVDHPTDADLYYTLGVLCLGEQLWGKAQSNFERTLKYADR 357

Query: 358 -------KEIFLLLAQI-EQANSHNTDK 377
                      L LA++ E+ +     +
Sbjct: 358 DAQRRICIRAHLALARLFEETDRAEDAQ 385


>gi|229010927|ref|ZP_04168123.1| hypothetical protein bmyco0001_13810 [Bacillus mycoides DSM 2048]
 gi|229058255|ref|ZP_04196643.1| hypothetical protein bcere0026_13700 [Bacillus cereus AH603]
 gi|229132427|ref|ZP_04261281.1| hypothetical protein bcere0014_13630 [Bacillus cereus BDRD-ST196]
 gi|229166466|ref|ZP_04294222.1| hypothetical protein bcere0007_14380 [Bacillus cereus AH621]
 gi|228617040|gb|EEK74109.1| hypothetical protein bcere0007_14380 [Bacillus cereus AH621]
 gi|228651133|gb|EEL07114.1| hypothetical protein bcere0014_13630 [Bacillus cereus BDRD-ST196]
 gi|228720119|gb|EEL71703.1| hypothetical protein bcere0026_13700 [Bacillus cereus AH603]
 gi|228750327|gb|EEM00157.1| hypothetical protein bmyco0001_13810 [Bacillus mycoides DSM 2048]
          Length = 436

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 137 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 195

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 196 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 250

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 251 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 310

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340
           +K                L   +    LK A  L+E  K   E L+ V + A++ G    
Sbjct: 311 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 355

Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362
               D A AK  L M        +  + 
Sbjct: 356 QLLWDLAFAKKQLEMYSDALKHYESAYT 383


>gi|149919802|ref|ZP_01908279.1| zinc finger/thioredoxin putative [Plesiocystis pacifica SIR-1]
 gi|149819409|gb|EDM78840.1| zinc finger/thioredoxin putative [Plesiocystis pacifica SIR-1]
          Length = 1419

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 91/305 (29%), Gaps = 36/305 (11%)

Query: 92   LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
            L+ +     P   ++ S     +    E  +  +E    LA      A  K     + P 
Sbjct: 721  LLHLRYGPDPERLQIASTALASYQGRPEPFIARIEGLGLLANGDTAGALAKFGG--EDPR 778

Query: 152  TREFAVYSLYFE--SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            ++      LY        GD+  A+  A   L + P+       V++  + A      + 
Sbjct: 779  SQ------LYRAWVQLETGDVEGARATAEAVLTLRPEDRAAQLVVLEARLAANS-DDGLA 831

Query: 210  FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC---- 265
             L +    A +    R +L+ + + E               E++    +   A +     
Sbjct: 832  ALRKAANEAPDQLSLREVLMRSTAAEGLLA-----------EAVAAGKDLRPAVVSDGHK 880

Query: 266  ------AAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALR 316
                   A+    Q    +A  +LE+    +       I  +   L + N          
Sbjct: 881  AELLRQRAQLSRRQGNIIEAVRLLEQALATDAGLLAARIDRVMIWLENANLPAAKAEVDV 940

Query: 317  LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
            LE+   E    + + ++  L  G   +A  +     + A   E   + A+         +
Sbjct: 941  LEQERPEDPAIIKLAARRDLAEGEFVRALERIGALGERA-DAEAMTIAAEAHALEKRVDE 999

Query: 377  KILYW 381
                W
Sbjct: 1000 ARQAW 1004



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 7/165 (4%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKA 180
             +LL  +  L +  Y  A  +++         E  V+    ++    G +  A+ +  KA
Sbjct: 1199 AHLLLGRALLVQGDYVEALTEIQQAQTTEGDTEVEVW--LGQALEYNGRVPDAKGHYRKA 1256

Query: 181  LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            L++  D       + + Y       +AI  L     ++ ++        +A  L + D G
Sbjct: 1257 LELDGDNRMAAALLGRLYAYDGAARKAIELLTPVVADSDDYP----YAHLALGLAHRDLG 1312

Query: 241  DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                +  D  ++ +L  N   A     + L  +N+   A   L+ 
Sbjct: 1313 KREQAIADFRKAHELDPNLFEAYYQEGRMLNDRNQHSAAAKALQA 1357



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 84/272 (30%), Gaps = 43/272 (15%)

Query: 88   LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
            LY   + +   ++  AR     V           + +LE ++A        A        
Sbjct: 781  LYRAWVQLETGDVEGARATAEAVLTLRPEDRAAQLVVLEARLAANSDDGLAAL------- 833

Query: 148  QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                                           KA + +PD   + E +++        + A
Sbjct: 834  ------------------------------RKAANEAPDQLSLREVLMRSTAAEGLLAEA 863

Query: 208  ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            +    +  + A   + ++A LL  R+  +  +G++I +     ++L      + A I   
Sbjct: 864  VAA-GKDLRPAVVSDGHKAELLRQRAQLSRRQGNIIEAVRLLEQALATDAGLLAARIDRV 922

Query: 268  KSLISQNKKRKAEV---ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
               +       A+    +LE+    +P          L     V  L+R   L E     
Sbjct: 923  MIWLENANLPAAKAEVDVLEQERPEDPAIIKLAARRDLAEGEFVRALERIGALGERA--D 980

Query: 325  VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             E++ I ++       +D+A      A  + P
Sbjct: 981  AEAMTIAAEAHALEKRVDEARQAWAQARTLDP 1012


>gi|222149839|ref|YP_002550796.1| TPR repeat protein [Agrobacterium vitis S4]
 gi|221736821|gb|ACM37784.1| TPR repeat protein [Agrobacterium vitis S4]
          Length = 503

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 4/169 (2%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L++          + A      +L+    +  A+  L       GDL  +     +AL 
Sbjct: 10  RLIQAFQLHKAGMLDEAIAHYRAILEEEPDQVDALRLLASAERSRGDLAQSLSLYARALR 69

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P+   +   +      A     A+    +  + A +     A       + +AD  D 
Sbjct: 70  LAPEESDIWYNLGNALGEAGRKPDALEAYQRAAQLAPD----NAACHANIGVTHADLDDY 125

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            A+     ++L L   + +A      +L    +   A  +L K  ++ P
Sbjct: 126 PAAITAYRQALALDPQNRIALHNLGNALSELGEAEAAMALLSKALEIYP 174


>gi|157960199|ref|YP_001500233.1| HemY domain-containing protein [Shewanella pealeana ATCC 700345]
 gi|157845199|gb|ABV85698.1| HemY domain protein [Shewanella pealeana ATCC 700345]
          Length = 389

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 69/414 (16%), Positives = 140/414 (33%), Gaps = 49/414 (11%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL--- 57
           M+R + Y  +I L +C    +      + +  G+    TS F  +  L  F     L   
Sbjct: 1   MVRALVYLVIILLGLCISPFLVGSKGYLYLAIGDYQVETSIFFAVIALIIFYSLLQLVEF 60

Query: 58  -LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115
            +  +    LS   +      K            G +++A  +   A K M     +   
Sbjct: 61  VVVWLLNMVLSSRYLPERWRKKAARKHTLL----GALALAEEDWLAAEKAMAKGAEK--- 113

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFA---VYSLYFESCRIGDL 170
                 + LL    A   +  + A ++     Q+     +         L  +    GDL
Sbjct: 114 -GEIPALNLLAAARAAHHQDNHQARDEYLAKAQLEPLAAKAVGTTRTRYLLQQ----GDL 168

Query: 171 NSAQRYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWN 222
            +A+    +   ++P      P V +  ++ Y   ++W +A+  L    ++K+  A +  
Sbjct: 169 IAAR---EELDKLNPTSKSKLP-VLKLAIELYQAQQDW-QALKLLLPIVSKKQILADDAL 223

Query: 223 RNRAI---LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +  ++   L +      A++ ++   +H    + +     I      A  L    +K +A
Sbjct: 224 QALSLKTNLALLTQAAKANEQELEKCWHWLSRAERKQAEYI---ALYAIGLSRFERKDEA 280

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +L K  K +  P I      +L+   V   K+ L LE   + +V+    ++K+  +  
Sbjct: 281 VKMLLKQVKTSASPSIFKAVAEVLTPADVEAKKQLLALETQFENNVDYQTCLAKLYQQNH 340

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
              QA      A  +   K     LA  ++               AL +  +  
Sbjct: 341 DYHQAKIWWQKACYLQDDKNSLHALADAQEHLGE--------LNRALQSRRNAA 386


>gi|157375432|ref|YP_001474032.1| hypothetical protein Ssed_2295 [Shewanella sediminis HAW-EB3]
 gi|157317806|gb|ABV36904.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 386

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 109/383 (28%), Gaps = 73/383 (19%)

Query: 93  MSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IP 150
           ++         R   H   S +     +Y   L      L   + + A +    ML    
Sbjct: 11  IAAGYGWYMGRRSVRHKQSSDRKKLSRDYFTGL----NFLLSNESDKAVDLFISMLDVDD 66

Query: 151 AT--------REFAVYS-----------------LYFESCRI------GDLNSAQRY--A 177
            T          F                     L  E   I       D  +A  Y  A
Sbjct: 67  DTIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPSLATEQRDIAMMELGKDYLAAGFYDRA 126

Query: 178 TKALDI---SPDAPWVTEA-VVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIAR 232
            +         D     E  ++  Y + KEW +AI  +   K+K       N A      
Sbjct: 127 EEIFQNLVKQDDHSEAAETHLIDIYQVTKEWQKAINIIKSLKRKRQLVLKHNTAHFYCEL 186

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWK 288
           + E AD G  +     AI   K       A +  A+  + Q +  K +     +LE    
Sbjct: 187 ANEEADSGGQLKLLQAAI---KQDPQCGRAILTLAQKYLDQGELIKCKDMLYKLLEA--D 241

Query: 289 VNPHPEIANIYTHLLSENTV-----GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           V   P+          E+         L+    L++    SV   + +++  +E G    
Sbjct: 242 VELIPDALATCRQAYHESNDSTGYCDFLR--QALQQGAGASV--AITLAQHLIEQGETQA 297

Query: 344 AHAKAMLAMKIAPRKEIF-----LLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-D 397
           A    +  +   P  + F     + + Q E   +  +  +L            P +   +
Sbjct: 298 AEKLVLDGLYRHPTMKSFQHLMQMQMLQAEDGQAKESLTMLEKLVQQQIKFR-PGYRCSE 356

Query: 398 DGYLSSV--WLPLSPISKTLCYF 418
            G+ S    W    P  K+    
Sbjct: 357 CGFPSHSLYWH--CPSCKSWGSI 377


>gi|123444244|ref|YP_001008212.1| cellulose synthase subunit BcsC [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091205|emb|CAL14088.1| Probable BcsC protein involved in cellulose synthesis [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 1161

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138
           GL    A +   A ++     +       +     L+      LL  E   AL      +
Sbjct: 314 GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKAGNTAL 373

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   QI  +  +A+  L   +    D  +A+++  +AL + P        +   Y
Sbjct: 374 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 433

Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN     Q+ K     N  +  +L  ++   A +     +     ++ 
Sbjct: 434 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAEMLAAQQQWHQAAEKYRQAQ 492

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           K+  N +  +   A++L       +A+ 
Sbjct: 493 KMAPNDVWITYRLAQALAQDGHLAQADA 520



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 50/203 (24%), Gaps = 15/203 (7%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
              L  +A             + Q+          L   +        + A   L     
Sbjct: 550 SQALAHLATLPAAQWNDNIRELDQRLKLDQ----VLTLARQLRENGDESGAITALRQQPA 605

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                      L   +   GD + A     +     P  P      ++ Y+     S A 
Sbjct: 606 NTQIDLT----LADWALERGDYSEALAGYQRIRAREPQNPDARLGEIEAYIAEGRLSDAR 661

Query: 209 TFLNQKKKNAKEW---NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
             L  +    +      + R     +   +     D+      A  + K   +   A + 
Sbjct: 662 QHLQTEPLTGEGASLNTQRRVANAWSGVGDPQKAADIFQRLKPA--AAKGAPSQDNALVF 719

Query: 266 A--AKSLISQNKKRKAEVILEKI 286
              A+   SQ +   A+   ++ 
Sbjct: 720 RDSARLAQSQGQPVAAQDDFKQA 742


>gi|310819105|ref|YP_003951463.1| hypothetical protein STAUR_1832 [Stigmatella aurantiaca DW4/3-1]
 gi|309392177|gb|ADO69636.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1222

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 12/226 (5%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A   A +A   SP    V   ++       + +    FL    K   +  R R  L   
Sbjct: 332 TATVEAERAARASPK--DVGLQLLAAANHRDDLNLRRHFLEAALKVEPDSLRVREKL--- 386

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +    ++             ++   +S  A +  A++  +     +A  ++E+ ++  P
Sbjct: 387 -AEHELERDHPERVLELLQPLVESAQDSASARLVLARAYEALGVSARANTLVEETFRRAP 445

Query: 292 H-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           + P +  A + +    E     L R      +  +   S  +++    +MG +D+A  + 
Sbjct: 446 NVPRVVRAAVASSRKLERQQEVLDRLRVALALRFDDTASRNLLAAQLADMGRVDEAAREY 505

Query: 349 MLAMKIAPRKEIFLL-LAQIEQANSH-NTDKILYWTQSALHAMPDP 392
              + + P      + LA++  +N   +  K  +    AL A  +P
Sbjct: 506 SQLLALNPFDNAARVRLAELRASNGKLDAAKANFAEARAL-APDEP 550



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 1/108 (0%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
            V+    F +     LL  Q+A   R    A E  +++   P      V  L       G
Sbjct: 472 RVALALRFDDTASRNLLAAQLADMGRVDEAAREYSQLLALNPFDNAARVR-LAELRASNG 530

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            L++A+    +A  ++PD P V E   +  + A     A+    +   
Sbjct: 531 KLDAAKANFAEARALAPDEPEVYEREGRALMSAGHRDEALAAFARSLA 578


>gi|254723694|ref|ZP_05185480.1| TPR domain protein [Bacillus anthracis str. A1055]
          Length = 420

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|193669389|ref|XP_001951091.1| PREDICTED: pre-mRNA-processing factor 6-like [Acyrthosiphon pisum]
          Length = 930

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 37/211 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    + LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 568 RAAYFEKNH-GTRDSLETLLQKAVAHCPKSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 625

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAIL 228
            +P++  +  A V+      E+ RA   L++ + +A                     A+ 
Sbjct: 626 ANPNSEEIWLAAVKLESENSEFDRARRLLSKARASAPTPRVMMKSAKLEWCLNNLDTALQ 685

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           ++  +L                   +GD+  ++     +LK C +SI   I  A+    +
Sbjct: 686 ILEEALVKFPDYAKLWLMKGQIEEQQGDVDRAHETFNSALKKCPSSIPLWIWLARLDERR 745

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLL 303
               KA  +LEK    NPH PE+      + 
Sbjct: 746 KMLTKARSVLEKGRLKNPHNPELWLEAIRIE 776



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  ++  +      
Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKIQAARNVIMKGCEDNPKSEDLW- 335

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++++    S+   I AA        KRK   +  K 
Sbjct: 336 -------LEAARLQPPETAKAVIAQAVRHIPTSVRIWIKAADLESETKGKRK---VYRKA 385

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SV+  + ++++     + + A
Sbjct: 386 LEHIPNSVRLWKAAIELEDPEDARILLSRA---VECCPTSVDLWLALARL----ETYENA 438

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468


>gi|153840542|ref|ZP_01993209.1| HemY protein [Vibrio parahaemolyticus AQ3810]
 gi|149745796|gb|EDM56926.1| HemY protein [Vibrio parahaemolyticus AQ3810]
          Length = 311

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 91/291 (31%), Gaps = 14/291 (4%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G++ +   +   A K  +  +  H      L YL+  + A  +       +    +   
Sbjct: 8   EGIIKLLEGDWKGAEKKVTRWANHH--DMPLLCYLVASEAAQGQGDKAK-RDHYLALASQ 64

Query: 150 PATREFAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                 AV        +  R  +  +A           P+   V   +   Y+  K W  
Sbjct: 65  QENAHLAVELTR--AKQFIRDNEFEAAFDTLQSLKGQYPNNSIVLNLLKTTYMQLKLWQP 122

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-----SLKLCDNSIM 261
            I  + Q  K        +A L+         +          I      + K+  ++ +
Sbjct: 123 LIDLMPQLAKAKLVTEEEQAELIQKAQCGLLHEVAQQQGSEGLISHWNSLARKVKQDTHL 182

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
            +   A+ LI++    +A  +L++  K  P PE+  +   L   +    +     + +  
Sbjct: 183 IACF-ARDLIARKADTEAFTVLKEALKKQPEPELYQLLPDLNLPDIHPVVVFLEGVVKKE 241

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
            ++  +   ++          QA     +A+K+      +  LA   +  +
Sbjct: 242 ADNAAAHSALAHFYFRQEKWQQAQEHFEIALKLRSDVSDYAFLADTLEKQN 292


>gi|228914194|ref|ZP_04077810.1| hypothetical protein bthur0012_14270 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228845398|gb|EEM90433.1| hypothetical protein bthur0012_14270 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 434

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|85080749|ref|XP_956598.1| hypothetical protein NCU00213 [Neurospora crassa OR74A]
 gi|28917668|gb|EAA27362.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 820

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 95/289 (32%), Gaps = 30/289 (10%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-------FAVYS 159
            +Y+S   +  +   V     +    +  Y  A +  + +  I  TR          ++ 
Sbjct: 513 AAYMSLPRSHQDTPWVLAQMGRTQYEQANYAEAEKYFKRLRVIAPTRLEDMEVYSTVLWH 572

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E+            A + +D   D+P    A+   + LA +  +A+    +  +   
Sbjct: 573 LKKETELS-------FLAHEMIDSVWDSPEAWCALGNAWSLAYDHEQALRCFKRATQLDP 625

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    A     +  E+ +  +   +      ++        A     +         KA
Sbjct: 626 KF----AYAYTLQGHEHVENEEYDKALTAYRHAIAADKRHYNAYYGIGRVYEKLGNYDKA 681

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVS 332
                    ++P    A+        + + + K+         +  E+   + +  +  +
Sbjct: 682 LSHYHAASVIHP----AHAVLICCIGSVLHRQKQFKQALPYFTKATELAPRAPDVRLKKA 737

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
           +  L+MG +  A  + M+   +AP R ++  LL ++ +        + +
Sbjct: 738 RALLQMGQLKAAQTELMILKDLAPDRAQVHFLLGKLSKTLHDKKSAVRH 786


>gi|307546941|ref|YP_003899420.1| hypothetical protein [Halomonas elongata DSM 2581]
 gi|307218965|emb|CBV44235.1| TPR domain protein [Halomonas elongata DSM 2581]
          Length = 1351

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 23/208 (11%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            LY         ++A+    +     PD+ +  +A+    +       A+  L++     
Sbjct: 45  GLYEGKRLAEAESAARAMTER----YPDSAFAWKALGTTLLEDGRVEEALEHLHRAV--- 97

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            + N +  + L + +     +GD   +      +++L  +   A    A+ L S  K  +
Sbjct: 98  -DINASDPLSLTSLAAVYYRQGDHDQAVRYQRRAVELQPDYAPAQYRLAEMLQSAGKHVQ 156

Query: 279 AEVILEKIWKVNPHPEIA-NIYTHLLSENTV--------GKLKRALRLEEINKESVESLV 329
           A   LE   K     E+  + +   +   ++          L    +LE           
Sbjct: 157 A---LEHASKAR---ELGYDAFRSGVLVGSLLYQTKYFSQALDIYKQLERDYPGHAPIYN 210

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +  +  ++G    A +    A++  P 
Sbjct: 211 NLGNLYKDIGQYQLAESYYQRALEERPD 238



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 16/204 (7%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             AR M                 LLE      + +   A E L   + I A+   ++ SL
Sbjct: 57  SAARAMTERYPDSAFAWKALGTTLLE------DGRVEEALEHLHRAVDINASDPLSLTSL 110

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                R GD + A RY  +A+++ PD       + +    A +  +A+   ++ ++   +
Sbjct: 111 AAVYYRQGDHDQAVRYQRRAVELQPDYAPAQYRLAEMLQSAGKHVQALEHASKARELGYD 170

Query: 221 WNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             R+  ++  L+ ++   +   D+           +                    + + 
Sbjct: 171 AFRSGVLVGSLLYQTKYFSQALDIYKQLE------RDYPGHAPIYNNLGNLYKDIGQYQL 224

Query: 279 AEVILEKIWKVNPHPEIANIYTHL 302
           AE   ++  +    P+    Y+++
Sbjct: 225 AESYYQRALEER--PDYVMAYSNI 246


>gi|148547360|ref|YP_001267462.1| cellulose synthase subunit BcsC [Pseudomonas putida F1]
 gi|148511418|gb|ABQ78278.1| cellulose synthase operon C domain protein [Pseudomonas putida F1]
          Length = 1172

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 102/296 (34%), Gaps = 25/296 (8%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             L+    ++     Y  L    +S+A  ++  A + +  V +    +   +  L+ V  
Sbjct: 371 RALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVRRMAPDNESAVRGLMRVYQ 430

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---------ESCRIGDLNSAQRYATKA 180
           A +  +   A   L+ +      +  ++              E+ +  D ++A     +A
Sbjct: 431 AQSPGK---AQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEALQREDWSTASHVLGQA 487

Query: 181 LDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             ++PD PW+   +   ++      E   A   L Q +           + L +   +  
Sbjct: 488 SALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQPRDPATRYAHGLFLESSDRDAL 547

Query: 238 D----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK----V 289
                +    A++   + +L+      M ++ +A+ L +Q +  +A  +LE         
Sbjct: 548 ALDSLRAVPQATWSADMHALEQRVQRRM-TLASAQQLQAQGRGAEATALLEAGLARGEGS 606

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           +    +   +     E+   +      L        ++ + V + A+  G++ QA 
Sbjct: 607 SDDLMLLADWAAARGEHGKARSYYQRVLVA-QPGRPDARLGVMESAVAEGNLQQAR 661



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 89/261 (34%), Gaps = 6/261 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L + + AL  +    A        Q     E+A+  L   S   GD+ +A+R   +  
Sbjct: 353 ALLKKAEQALEAKDVRGARALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVR 412

Query: 182 DISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL--ENA 237
            ++PD       +++ Y      +    +  L  +++      R    L   R    E  
Sbjct: 413 RMAPDNESAVRGLMRVYQAQSPGKAQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEAL 472

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            + D   + H   ++  L  +        A SL  Q +  +A+    ++ +  P  + A 
Sbjct: 473 QREDWSTASHVLGQASALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQP-RDPAT 531

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y H L   +  +   AL       ++  S  + +        +  A A+ + A      
Sbjct: 532 RYAHGLFLESSDRDALALDSLRAVPQATWSADMHALEQRVQRRMTLASAQQLQAQGRGA- 590

Query: 358 KEIFLLLAQIEQANSHNTDKI 378
           +   LL A + +    + D +
Sbjct: 591 EATALLEAGLARGEGSSDDLM 611


>gi|116751468|ref|YP_848155.1| sporulation domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700532|gb|ABK19720.1| Sporulation domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 538

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 76/243 (31%), Gaps = 18/243 (7%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           LA      A + L    Q        +Y +            A  Y  KAL   PD P V
Sbjct: 46  LAAGDSIQAVKYLTAAEQKTPKDPTLLYYIGVAYSGRNMHAEALSYYQKALAEKPDYPEV 105

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             A+   Y    ++ +A     +   +        A   +   L    KGD  A+     
Sbjct: 106 YNAMGVLYAGRGQYDQAQAAFQKVLASPFYETPQFARYNLG--LVYEKKGDQQAALQQYQ 163

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-----LLSE 305
           E+ +L     ++    A  L +Q +  +A+   E    +   P++A  + H       + 
Sbjct: 164 EAARLQPTHALSHHRTAMILEAQGRAGEAQK--EFAMALQYSPDLAEAHMHYGILCFGTG 221

Query: 306 NTVGKLKRALRLEEINKESVES--------LVIVSK-IALEMGSIDQAHAKAMLAMKIAP 356
           +    +    R+  +   +VE+         +  ++  A           +  + +   P
Sbjct: 222 DFDTAVHSFARVIRLMPNTVEADEARKYLDRIAAAQDAASRSMPFHPPERRVRMEVIPQP 281

Query: 357 RKE 359
            + 
Sbjct: 282 DER 284


>gi|330823351|ref|YP_004386654.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus
           denitrificans K601]
 gi|329308723|gb|AEB83138.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus
           denitrificans K601]
          Length = 926

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 85/273 (31%), Gaps = 19/273 (6%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++    +  L        S +    +  L+        L ER+   A + ++++ +    
Sbjct: 416 LASGKGDAALGELRSIAASDEGVVADMALIN-----ALLQERKVEEALKAIDLLEKKRPA 470

Query: 153 REFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 +        +  D   A++   +AL+I P        +       K    A   
Sbjct: 471 DVLPVFLRGRALLLKQ--DTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +    K      +   +L+  R+   AD+ ++      A++        I   +      
Sbjct: 529 IEAAIKRDPGNVQAYMVLMELRAANGADRAELAGILRKAVDGAPSSP--IPRQLLV-DHY 585

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
           +   + ++A  + ++       P+ A ++  L      +      L    R+  +  +S 
Sbjct: 586 LRGGETKEALAVAQQAVAAL--PDNAQLFDALGRAQSANGEHNQALASFNRMAALQPQSP 643

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              + ++   L  G    A      A++I P  
Sbjct: 644 VPYLRMAGANLIAGDRTAAGQSWRKALEIDPTA 676



 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 92/321 (28%), Gaps = 47/321 (14%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + AL     +   HN  LA        Q        + YL      L       A +   
Sbjct: 612 FDALGRAQSANGEHNQALASFNRMAALQ----PQSPVPYLRMAGANLIAGDRTAAGQSWR 667

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             L+I  T   A   L   +        A   +       P          + +V  K W
Sbjct: 668 KALEIDPTALEAQQGLVRLAMADRKSGDALAMSRTVQKQRPKEAAGYALEGEIHVADKAW 727

Query: 205 SRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +AI       K    + +   R   +L+ A     AD+         A ++       +
Sbjct: 728 DKAIDVFRAGLKQVPASGELAVRLHEVLVTAGKKSEADRLATEWQRSHAKDAT--FPLYL 785

Query: 261 MASICAAKSLIS---------QNKKRKAEVILEKIW------------------KVNP-H 292
                AAK L             +   A  +    W                   + P  
Sbjct: 786 GTRALAAKDLPESLRQYERAVALQPNNAIALNNMAWIKGQLGRDGALADAERANALAPNQ 845

Query: 293 PEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           P   + +  LL  +   +  RA     R+ ++  + +E  + ++KI ++ G  D A A  
Sbjct: 846 PAFMDTWAMLL--SAASQHARAVDLQKRVVQLRPQQLEFKLNLAKIYIKAGQKDAAKAVL 903

Query: 349 MLAMKIAPRKEIFLLLAQIEQ 369
                   R   F   A++E+
Sbjct: 904 DELAAAGAR---FPAQAEVEE 921



 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 56/399 (14%), Positives = 121/399 (30%), Gaps = 30/399 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA- 156
            +   A+       +    +   L+   + +  +     + A      + QIP       
Sbjct: 146 GDEAKAQGSLDEALKAKADYAPALIE--QARSKVRGGDVDGALAG---LGQIPRQSSVGA 200

Query: 157 ----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               +        +  D ++A      AL++ P       A+V+  +   + + A   L 
Sbjct: 201 EALKLRGDILLHNKR-DADAAMAAYRDALEVKPSYVEGQAAIVELLIFQGKTTAAAESLQ 259

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             +K A      R   L  +++    KGD  A+  +  + +++   S  A   A  + + 
Sbjct: 260 ALEKAAP----GRPQTLYLQAMLAYTKGDFKAAQENVQKLVRMAPESARALELAGMTDLQ 315

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES----- 327
                +AE  L K  ++NP               T  +L R  +        ++      
Sbjct: 316 LGANAQAEASLAKALQLNP----GLAMARRGLVTTYMRLGRLDKAIATLPSDIDGNDRDP 371

Query: 328 --LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
             L +  +  +  G +D+A      A ++ P   +      +    S   D  L   +  
Sbjct: 372 GMLGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALGELR-- 429

Query: 386 LHAMPDPLWISDDGYLSS--VWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAY 443
             A  D   ++D   +++      +    K +   E K P                +   
Sbjct: 430 SIAASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLKQDTA 489

Query: 444 PADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIR 482
            A             + P+   ++  +++   P D   R
Sbjct: 490 GARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 120/330 (36%), Gaps = 40/330 (12%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAV 157
                   S  + +           L+  +A  +  +  A E ++ ++++   + R   +
Sbjct: 249 GKTTAAAESLQALEKAAPGRPQTLYLQAMLAYTKGDFKAAQENVQKLVRMAPESARALEL 308

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL------ 211
             +     ++G    A+    KAL ++P        +V  Y+      +AI  L      
Sbjct: 309 AGMTD--LQLGANAQAEASLAKALQLNPGLAMARRGLVTTYMRLGRLDKAIATLPSDIDG 366

Query: 212 ---------------------NQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247
                                ++ ++     +R   N A++  + ++ +   G   A+  
Sbjct: 367 NDRDPGMLGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALG 426

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLS 304
           + + S+   D  ++A +    +L+ + K  +A   ++ + K  P    P        LL 
Sbjct: 427 E-LRSIAASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLK 485

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363
           ++T G  K   R  EI+     +  +++ +       D A A+   A+K  P   + +++
Sbjct: 486 QDTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARARIEAAIKRDPGNVQAYMV 545

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           L ++  AN  +  ++    + A+  A   P
Sbjct: 546 LMELRAANGADRAELAGILRKAVDGAPSSP 575



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 89/274 (32%), Gaps = 17/274 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIP 150
           + +I +  +  A  +   +       ++    +   Q  L+      A  +L+  +   P
Sbjct: 1   MTAITSRTLVPAAALTVALLMSACGRDDPDALVASAQDYLSRNDAPAAIIQLKNALQSRP 60

Query: 151 ATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            + +     L  ++    GD   A+    KA D+      V   +    + ++++S+  +
Sbjct: 61  DSAKA--RLLLGQALLDTGDAQGAETEFRKAQDLGVPPAEVVPQLALALLRSRQYSKITS 118

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               ++    +     A L    ++    +GD   +     E+LK   +   A I  A+S
Sbjct: 119 DYAGQRLADAQAQ---ANLQTTLAIAWQRQGDEAKAQGSLDEALKAKADYAPALIEQARS 175

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-------NTVGKLKRALRLEEINK 322
            +       A   L +I + +    +      L  +       +    +       E+  
Sbjct: 176 KVRGGDVDGALAGLGQIPRQS---SVGAEALKLRGDILLHNKRDADAAMAAYRDALEVKP 232

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             VE    + ++ +  G    A        K AP
Sbjct: 233 SYVEGQAAIVELLIFQGKTTAAAESLQALEKAAP 266


>gi|328777929|ref|XP_003249419.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Apis mellifera]
          Length = 1065

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 126 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 183

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       G++  A  +  K
Sbjct: 184 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 235

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 236 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 291

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      +++L  N   A    A +L  + +  +AE       ++ P H +  N 
Sbjct: 292 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNN 351

Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++  E        +L     LE    E   +   ++ +  + G +++A      A++I
Sbjct: 352 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 409

Query: 355 APR 357
            P 
Sbjct: 410 QPT 412



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 326 GQVVEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 382

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 383 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 442

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 443 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 492



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 83/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 261 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 320

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       + A  L   +    ++G +  +    +++L++ 
Sbjct: 321 ALKEKGQVVEAEDCYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 376

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 434

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 435 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 480


>gi|318607908|emb|CBY29406.1| cellulose synthase operon protein C [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 901

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138
           GL    A +   A ++     +       +     L+      LL  E   AL      +
Sbjct: 47  GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTAL 106

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   QI  +  +A+  L   +    D  +A+++  +AL + P        +   Y
Sbjct: 107 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 166

Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN     Q+ K     N  +  +L  ++   A +     +     ++ 
Sbjct: 167 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAETLAAQQQWHQAAEKYRQAQ 225

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           K+  N +  +   A++L       +A+ 
Sbjct: 226 KMAPNDVWITYRLAQALAQDGHLAQADA 253


>gi|171057456|ref|YP_001789805.1| HemY domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170774901|gb|ACB33040.1| HemY domain protein [Leptothrix cholodnii SP-6]
          Length = 415

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/396 (13%), Positives = 99/396 (25%), Gaps = 30/396 (7%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           +      VSI W       S    + +L     A  +        +  P        +R 
Sbjct: 21  LGANDGVVSIYWSPWRVDLSLNFFVLLLLASGAAVYIAVGSINRLVGLPERARLWRLQRR 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE--------YLVYLLEVQIA-L 131
                 AL   L  + +     A K      +      E         L +LL       
Sbjct: 81  ERAAQMALRESLGLLFSGRYSRAHKAAQRALEIRALTTELTADVEFGALAHLLAASSLHR 140

Query: 132 AERQYNIAHEKLEM--MLQIP--ATREF-AVYSLYFE-SCRIGDLNSA-QRYATKALDIS 184
            + +     +      ML  P   T        L  E +    D + A ++ A     ++
Sbjct: 141 LQDRTRRDEQLGRALGMLGAPALPTPVAEGARLLATEWAIDDRDPDRAFEQLAQLPAGVA 200

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                     +Q   L+++   A+       K+          +L + ++E  D      
Sbjct: 201 RRTQ-ALRLRLQAARLSRQPLEALKTARLLAKHQGFAPVAAHGILRSLAIEVLDTARDAD 259

Query: 245 SYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIAN 297
                   L   D      +  AA      +        L   W+            +  
Sbjct: 260 QLRRIWLQLDPADRRDPVVTARAASLAAELDAVTDGRGWLRPHWEHIHQLGERERAAVLR 319

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356
            +  +L       L           +         +   E     +A     +A   A  
Sbjct: 320 AFVDVLPGLPADWLPLLEDAVAAQPQDAPLAYAAGRAMAERQLWGRARRLLEVAASNASA 379

Query: 357 ----RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
               R++ +  L QI      + D+     + A +A
Sbjct: 380 ELGLRQDAWRWLGQIADQE-GDEDQAQRCYRKAANA 414


>gi|52076018|dbj|BAD46471.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1119

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKK 216
                ++ +  D  +A++      + S       EA++       + + A    L  K  
Sbjct: 3   RG-ASQAQQRKDAEAAEQLDRLMREASSPRKEAREALLLDRSRRHDEAIARVDELAAKHP 61

Query: 217 NAKEWNRNRAILL---IARSLENAD----KGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            +        +L     +R++   D    +     +    I++ +L  N +  ++  A +
Sbjct: 62  ESAAVAHLAGLLHYHATSRAMAAKDRQGVEAHCNTARDFYIKAKRLAPNCVEIAVRLALA 121

Query: 270 LISQNKKRKAEVILEKIWKVNPHP-EIAN---IYTHLLS-ENTVGKLKRALRLEEIN 321
            +      +AE  +E+     P P + A     Y + L   ++  ++++A R+    
Sbjct: 122 RLRCFNDGEAEPEIERA-LAIPFPTDPAENNVAYDNALGTTSSRDRVEKARRVALAR 177


>gi|74316213|ref|YP_313953.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74055708|gb|AAZ96148.1| TPR repeat [Thiobacillus denitrificans ATCC 25259]
          Length = 931

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 87/254 (34%), Gaps = 10/254 (3%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           + ALA      A + LE  L++   R      L        D   A    +KA+ I P+ 
Sbjct: 177 RCALATGDAAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNN 236

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               +++V  +V A +  RA  +L   +K A +  R         +     +     +  
Sbjct: 237 LDALQSLVAIHVKAGDTQRAREYLAVIRKLAPKSTR----AHYLEASIAYSEKKFAEANA 292

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
              E+LK+  + + + + A  S  +    ++AE   ++     P               +
Sbjct: 293 AIQEALKVSPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKS 352

Query: 308 VGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIF 361
               K  + L           + L +  +  +  G+  QA A    A+ + P        
Sbjct: 353 KQFDKALVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQ 412

Query: 362 LLLAQIEQANSHNT 375
           L L+Q+   N+ + 
Sbjct: 413 LGLSQLAAGNTQDA 426



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 89/256 (34%), Gaps = 41/256 (16%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +  + Q        ++ L  Q  L +     A    E  L   A    AV SL   
Sbjct: 458 RALAALATLQKKGDASAKIHHLAGQAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQL 517

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
                  ++A+    +AL                                        ++
Sbjct: 518 DVAENKADAARMRLERALAQ--------------------------------------DK 539

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           NR   ++A S   A  G   AS     ++ +    +I   I   +  +++N+ +KA  + 
Sbjct: 540 NRVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELVRHYLARNEGQKALALA 599

Query: 284 EKIWKVNP-HPEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            +  + NP HP   N+     L  ++         RL    ++S E  V ++++ L  G 
Sbjct: 600 NEAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRETRQSPEGFVRLAQVQLADGK 659

Query: 341 IDQAHAKAMLAMKIAP 356
           +D+A    + A+++AP
Sbjct: 660 LDEARRNLLHALELAP 675



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 81/301 (26%), Gaps = 14/301 (4%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           SIA      A    +         +     +L    A A   Y  A    +  L      
Sbjct: 279 SIAYSEKKFAEANAAIQEALKVSPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGH 338

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV--QQYVLAKEWSRAITFL 211
              +  L     +    + A    T A  ++P         +  +  +     S+A    
Sbjct: 339 AEGLKMLATTQIKSKQFDKA--LVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALF 396

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +           R        L     G+   +  +  ++ +    S   ++ A   L 
Sbjct: 397 ERALALEPGNVTIR----TQLGLSQLAAGNTQDAIDELTDASQHSSGSQADTLLAVAYLS 452

Query: 272 SQNKKRK--AEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
            ++  R   A   L+K    +   H      Y    ++    +      L         +
Sbjct: 453 RKDYDRALAALATLQKKGDASAKIHHLAGQAYLG-KNDKLAARRNFEQALAADAAFFP-A 510

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           +  ++++ +     D A  +   A+     +   +L      A +      + W + A  
Sbjct: 511 VASLAQLDVAENKADAARMRLERALAQDKNRVAAMLALSRMAARNGQEQASIDWLEKAAR 570

Query: 388 A 388
           A
Sbjct: 571 A 571



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 95/280 (33%), Gaps = 21/280 (7%)

Query: 122 VYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +  L  +  L +R+   A     +  +     P T     + L   +   GD   A+ + 
Sbjct: 137 ILQLRGEALLNQRKLEEACNLFQQSYDASPGNPPT----YWGLSRCALATGDAAKARDWL 192

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL +          +    +  K+ ++A+   ++  K   E N   A  L +    + 
Sbjct: 193 ERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVK--IEPNNLDA--LQSLVAIHV 248

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H-PE- 294
             GD   +        KL   S  A    A    S+ K  +A   +++  KV+P H P  
Sbjct: 249 KAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKVSPDHVPSL 308

Query: 295 -IANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            +A +  H L   +      KR L          E L +++   ++    D+A       
Sbjct: 309 MLAGMSAHALGSYQEAETYFKRFLLRV---PGHAEGLKMLATTQIKSKQFDKALVTLAPF 365

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +    R    L LA   Q  + N  +     + AL   P 
Sbjct: 366 LAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPG 405



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 52/421 (12%), Positives = 113/421 (26%), Gaps = 47/421 (11%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++A  +   AR            H     ++    + LA +    A       ++I    
Sbjct: 179 ALATGDAAKAR--DWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNN 236

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+ SL     + GD   A+ Y      ++P +              K+++ A   + +
Sbjct: 237 LDALQSLVAIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQE 296

Query: 214 KKKNAKEWNRNRAIL-LIARSLENADK-------------GDMIASYHDAIESLK----- 254
             K + +   +  +  + A +L +  +             G        A   +K     
Sbjct: 297 ALKVSPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFD 356

Query: 255 -----LCDNSIMAS------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
                L                A ++ ++     +A  + E+   + P          L 
Sbjct: 357 KALVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQLGLS 416

Query: 304 SENTVGKLKRALRL--EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                        L     +    ++  +++   L     D+A A      K        
Sbjct: 417 QLAAGNTQDAIDELTDASQHSSGSQADTLLAVAYLSRKDYDRALAALATLQKKGDASAKI 476

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWK 421
             LA       ++        + AL A              + + P       L   E K
Sbjct: 477 HHLAGQAYLGKNDKLAARRNFEQALAAD-------------AAFFPAVASLAQLDVAENK 523

Query: 422 IPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI 481
                     +   + +   A  A    +  N  ++  +  ++K +  +   I P    +
Sbjct: 524 ADAARMRLERALAQDKNRVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELV 583

Query: 482 R 482
           R
Sbjct: 584 R 584


>gi|119510182|ref|ZP_01629320.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
 gi|119465132|gb|EAW46031.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
          Length = 304

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 62/209 (29%), Gaps = 16/209 (7%)

Query: 88  LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           L  GL +I A    +   A +  + +       +  L   L  Q          A    +
Sbjct: 47  LNQGLQAIQAGRLQDAIAAFQQATQLDPNLATAHYNLGLALR-QTGKL---KPAADAFYQ 102

Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                P        +     E      L  A  Y  +A+++ P   +    +       +
Sbjct: 103 ATQADPQFAPAFANLGGALLEGSN---LQQASDYLERAIELDPKLGFAHYNLGLVRQQQQ 159

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +W RAI    +  + +K        L  +       +G +  +     +++K       A
Sbjct: 160 DWERAIASFKKAMEYSKNAPEPPYHLGTSY----LQQGKVNQARDAFFQAIKNNPQYPEA 215

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291
                    +Q + ++A     K  + NP
Sbjct: 216 HYNLGMIWFNQGQLKEALAAFRKSAEANP 244



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 56/181 (30%), Gaps = 13/181 (7%)

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             +     W+ + +            AI    Q  +         A       L     G
Sbjct: 38  YSLPTSTTWLNQGLQAIQA--GRLQDAIAAFQQATQLDPNL----ATAHYNLGLALRQTG 91

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEI 295
            +  +     ++ +       A      +L+  +  ++A   LE+  +++P     H  +
Sbjct: 92  KLKPAADAFYQATQADPQFAPAFANLGGALLEGSNLQQASDYLERAIELDPKLGFAHYNL 151

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +      ++    +    +  E +K + E    +    L+ G ++QA      A+K  
Sbjct: 152 GLV--RQQQQDWERAIASFKKAMEYSKNAPEPPYHLGTSYLQQGKVNQARDAFFQAIKNN 209

Query: 356 P 356
           P
Sbjct: 210 P 210


>gi|39997085|ref|NP_953036.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39983975|gb|AAR35363.1| TPR domain protein [Geobacter sulfurreducens PCA]
          Length = 864

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 91/286 (31%), Gaps = 32/286 (11%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
           H + +   D+    L  GL      +  L   M                       A+  
Sbjct: 411 HYMRQHRSDRALATLKEGLTGT-KGDASLYNTM----------------------AAIMF 447

Query: 134 RQYNIAHE-KLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +   A   K   M +           +L       GDL+ A    ++ +   P      
Sbjct: 448 NERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDGAIAEYSRMVQEYPHNLRAI 507

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +     L    S A+ +  + +   +          ++ +  +  KG++  +     +
Sbjct: 508 LGLASLSELKGRESDALAWYTKARDTGEYAG------YLSLAGYHEKKGNLDKALAVLDD 561

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGK 310
           ++K    +  A +   + L++Q K + A  +   +  + P   +A  +   +  + +   
Sbjct: 562 AVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKA 621

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++ A R   +   +     I++ +  E G + +A  +    ++  P
Sbjct: 622 IEEARRAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEP 667



 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 77/235 (32%), Gaps = 7/235 (2%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +   A  +Y  A ++   +L+   ++   V  L          + A   A K L  +P 
Sbjct: 34  AKAYQALGKYEQAEKEYLKVLKQNPSKTDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPG 93

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           +    E +   Y L    + A        +  KE  R  A L +A  L          + 
Sbjct: 94  SAEALEVLGLGYALKGMPAEAERNFLLALE--KEPRRTSAKLQLAVLLMEQKSSREKEAR 151

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----L 302
               E L     ++ A    A   +S   + +A  I  K+  + P  + A +Y      L
Sbjct: 152 ALIDEILTADPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPG-DPAPLYRQGVILL 210

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                    K A  L +   +  E   +   IA +  +   A      ++KIAP 
Sbjct: 211 EKGEMDKAEKTAETLVQKFPQKSEGARLKGLIAYQRKNYADAITALQTSVKIAPS 265



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 98/303 (32%), Gaps = 44/303 (14%)

Query: 69  PAMLFHMLHKRN----YDKGYKAL-----------YTGL---MSIAAHNIPLARKMHSYV 110
           P      + K        KG  A+             GL   ++        A+ +    
Sbjct: 567 PRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKAIEEAR 626

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                       + +   +   +     A ++++  L+       A   L     R G+ 
Sbjct: 627 RAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEPGNIGAAMQLGEYLGRSGNT 686

Query: 171 NSAQRYATKALDISPDAP---WVTEAVVQQYVLAKEW-SRAITFLNQKKKNAKEWNRNRA 226
            +A       L  +P+     +    +++     +E  ++    L + +  A   N    
Sbjct: 687 AAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLEKAESFAPALNN--- 743

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L    +      G    +   A+ +LK    +   +     +L+   +  +A  ILEK+
Sbjct: 744 -LAFLYAEGY---GPREEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAVKILEKV 799

Query: 287 WKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEI--NKESVES---LVIVSKIAL 336
            K+ P +P     +A  Y      +T  + + A  L+E     +  ES    +++++++ 
Sbjct: 800 VKLMPSNPAVRYHLALAYR-----DTGDRARAATTLQEALNQGDFPESGQARIMLAELSG 854

Query: 337 EMG 339
             G
Sbjct: 855 AAG 857



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 10/229 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G +  A+   T A+ ++P+       +   Y+      RA+  L    K      + 
Sbjct: 379 LSKGRVREAESDFTTAVRVAPEMLNSRLVLAFHYMRQHRSDRALATL----KEGLTGTKG 434

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L    +    ++     +      + K     + A    A    S      A     
Sbjct: 435 DASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDGAIAEYS 494

Query: 285 KIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           ++ +  PH     +       L       L    +    +       + ++    + G++
Sbjct: 495 RMVQEYPHNLRAILGLASLSELKGRESDALAWYTK--ARDTGEYAGYLSLAGYHEKKGNL 552

Query: 342 DQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDKILYWTQSALHAM 389
           D+A A    A+K  PR     ++  +I  A     D I  +T     A 
Sbjct: 553 DKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAP 601


>gi|319776108|ref|YP_004138596.1| hypothetical protein HICON_14570 [Haemophilus influenzae F3047]
 gi|329123272|ref|ZP_08251840.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus
           aegyptius ATCC 11116]
 gi|317450699|emb|CBY86919.1| conserved hypothetical protein [Haemophilus influenzae F3047]
 gi|327471481|gb|EGF16929.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus
           aegyptius ATCC 11116]
          Length = 396

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE + + NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + ++K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339


>gi|257094833|ref|YP_003168474.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047357|gb|ACV36545.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 929

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 94/311 (30%), Gaps = 19/311 (6%)

Query: 92  LMSIAA------HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           ++++A         +  A    +  +     +      L    + LA+   ++A   LE 
Sbjct: 375 MLALAGQVFMQNGQVDKAGTYFAKAAALDPKNTGKRTSL--AMVNLAKGDSDVAFRDLEQ 432

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           +          + +L     +  + + A +         PD P          +  ++ +
Sbjct: 433 VAAADTGNRADL-ALIAAHLQRREFDQALKAIASLEKKQPDNPLTHNLRGTALLGKRDMA 491

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A    ++       +    A L    +  +  +     +       L     SI A + 
Sbjct: 492 GARKSFDKAVALNPAYFPAAANL----ANLDLAEKKPDEARKRFEAVLAKDPKSIQALLA 547

Query: 266 AAKSLISQNK-KRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEIN 321
            A+          +   ++ K    NP    P +A I  +L        L  A       
Sbjct: 548 LAQMRAKAGGSTEEVASLINKAVTANPTELAPRLALIGLYLGKNEVKSALSAAQDAVAAL 607

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
            +  E L    ++    G  +QA A       + P  +  +L +A++E A  +       
Sbjct: 608 PDKPEILDAAGRVQQAAGDFNQALATYGKLAALKPDSQLAYLRMAEVEVAAKNKDG-ARQ 666

Query: 381 WTQSALHAMPD 391
             Q AL   PD
Sbjct: 667 SLQKALKVKPD 677



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 81/268 (30%), Gaps = 34/268 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            L++         + + +  S +    +  L + L     L +R    A +  +  + + 
Sbjct: 445 ALIAAHLQRREFDQALKAIASLEKKQPDNPLTHNLRGTALLGKRDMAGARKSFDKAVALN 504

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A  +L          + A++     L   P +     A+ Q    A   +  +  
Sbjct: 505 PAYFPAAANLANLDLAEKKPDEARKRFEAVLAKDPKSIQALLALAQMRAKAGGSTEEVAS 564

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L  K   A        + LI   L   +    +++  DA+ +L              + L
Sbjct: 565 LINKAVTANPTELAPRLALIGLYLGKNEVKSALSAAQDAVAALPDKP----------EIL 614

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            +  + ++A                          +    L    +L  +  +S  + + 
Sbjct: 615 DAAGRVQQAA------------------------GDFNQALATYGKLAALKPDSQLAYLR 650

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           ++++ +   + D A      A+K+ P  
Sbjct: 651 MAEVEVAAKNKDGARQSLQKALKVKPDS 678



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 41/339 (12%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A+  GL++       L   +    + +    N      L   +A  ++ Y +A E +  M
Sbjct: 242 AIIRGLLA----EGKLDEAVKQLDAMKKVSANHPQTQYLRAMVAYQQKNYPVAREAVLQM 297

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L+      + +         +     A+ Y  KAL  +P+       ++  Y+   +  +
Sbjct: 298 LKAAPESPYGLQLAGLIEYELKAYPQAEAYLQKALPRTPELGIARRVLIASYLRDGQPGK 357

Query: 207 AITFLN----------------------QKKKNAKEWNRNRAILL--------IARSLEN 236
           A+  +                         + +       +A  L         + ++ N
Sbjct: 358 AMNVIEPVLDKIDKDSNMLALAGQVFMQNGQVDKAGTYFAKAAALDPKNTGKRTSLAMVN 417

Query: 237 ADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP--H 292
             KGD   ++ D  + +     N    ++ AA     + ++  KA   LEK    NP  H
Sbjct: 418 LAKGDSDVAFRDLEQVAAADTGNRADLALIAAHLQRREFDQALKAIASLEKKQPDNPLTH 477

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +         +    + K   +   +N     +   ++ + L     D+A  +    +
Sbjct: 478 -NLRGTALLGKRDMAGAR-KSFDKAVALNPAYFPAAANLANLDLAEKKPDEARKRFEAVL 535

Query: 353 KIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
              P   +  L LAQ+      +T+++      A+ A P
Sbjct: 536 AKDPKSIQALLALAQMRAKAGGSTEEVASLINKAVTANP 574



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 88/292 (30%), Gaps = 35/292 (11%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           AA +   A   +  ++      +  L YL   ++ +A +  + A + L+  L++      
Sbjct: 623 AAGDFNQALATYGKLAALK--PDSQLAYLRMAEVEVAAKNKDGARQSLQKALKVKPDSLE 680

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A   +       G L  A   A       P                K W+ A++      
Sbjct: 681 AQRGIIMLDLDAGRLTDALTVARDVQKQRPKEAIGYIFEGDAQASKKAWAEAVSAYRAGL 740

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL----KLCDNSIMAS------IC 265
           K+A       A  L    L   + G+        ++      +       ++        
Sbjct: 741 KSAPADGGELAPKLHWALLAGGNAGEADKFAETWLKDHPKDGRFRLYLAESASGRKDYAG 800

Query: 266 AAKSLIS------------------QNKKR--KAEVILEKIWKVNP-HPEIANIYTHLL- 303
           AA+   +                    + +  KA    EK  K+ P  P + +    LL 
Sbjct: 801 AARQYRALLETQANNPAVLNNLAWVAGQLKDPKAIEYAEKANKLAPNQPALMDTLATLLV 860

Query: 304 -SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              +T   L    R  E   ++    +  +K  ++ G  ++A  +     K+
Sbjct: 861 DKGDTARGLDLFKRALETAPQAAAIRLNYAKALIKAGQKNEAKNELEQIAKL 912



 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 102/312 (32%), Gaps = 46/312 (14%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIG-DLNSAQRYA 177
               L   +  LA+  +  A  +L+  + + P   E     L  ++   G D   A+   
Sbjct: 32  PEAMLASAREYLAKHDHKAAAIQLKNALQKNPELAEA--RFLLGKALLDGSDPTGAEIEF 89

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL+    A  VT  + +  ++  +  + I    + + ++ E    RA L  A      
Sbjct: 90  RRALEFKYPADQVTPLLARSMLMRGQADKVIKEFGKAELSSPEA---RADLQTALGQAYL 146

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----------KIW 287
            +     +      +L        A +  A+    +     A  +L+          + W
Sbjct: 147 MQSKPDLAEAAFAAALLAQPGYPSALMGQARMKAGRGDLPGAVALLDVSLEKSPKLYEAW 206

Query: 288 KV-----NPHPEIANIYT-----------HLLSENTVGK-----------LKRALRLEEI 320
           ++         + A               +L + + + +           +K+   ++++
Sbjct: 207 QLKGDLLAAQGDSAGAMVAYRKGLEIKPDNLSAHSAIIRGLLAEGKLDEAVKQLDAMKKV 266

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           +    ++  + + +A +  +   A    +  +K AP     L LA + +       +   
Sbjct: 267 SANHPQTQYLRAMVAYQQKNYPVAREAVLQMLKAAPESPYGLQLAGLIEYELKAYPQAEA 326

Query: 381 WTQSALHAMPDP 392
           + Q AL     P
Sbjct: 327 YLQKAL--PRTP 336


>gi|254498586|ref|ZP_05111306.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254352177|gb|EET10992.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 564

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 75/238 (31%), Gaps = 47/238 (19%)

Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA----TREFAVYSLYFESCRIGDLNSAQRYA 177
           L  Q      E     A    E  + Q P          +  +Y ++    DLN A  Y 
Sbjct: 8   LFAQAYKLHHEGHLPQAISIYEQILAQDPKHLNSLHFLGL--VYAQA---NDLNKAILYL 62

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           TKA  +SP    +   +   Y  +++W +AI       +   ++ +    L    +L+N 
Sbjct: 63  TKAQTLSPTDATLLNNLANAYKKSQQWDKAIDGYLHAIQLRPDYAQAHNNLATVYALQN- 121

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
              +   + H   +++    +   A+      L+ QN +  A                  
Sbjct: 122 ---NYPKALHHYTKAVHAEPDF-SAAHFNLGLLLLQNNQLDAAKT--------------- 162

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                          +   +  +N    E+   +  + LE  ++D+A       ++  
Sbjct: 163 ---------------QFNNVVALNPYHTEAYFYLGVLHLEGNALDEAEQAFQHVLEQD 205


>gi|47222947|emb|CAF99103.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1037

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 104/308 (33%), Gaps = 28/308 (9%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 85  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 142

Query: 123 YLLEVQIALAERQYNIAH--------EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
            LL+    L E +   A               ++       A  +L       G++  A 
Sbjct: 143 NLLKALGRLEEAKPAAATSLTKSKNMACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAI 202

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            +  KA+ + P+       +      A+ + RA+    +    +     N A++    + 
Sbjct: 203 HHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLAC 258

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP 293
              ++G +  +      +++L  +   A    A +L  +    +AE       ++ P H 
Sbjct: 259 VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHA 318

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAM 349
           +  N   ++  E   G ++ A++L         E   +   ++ +  + G + +A     
Sbjct: 319 DSLNNLANIKRE--QGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 376

Query: 350 LAMKIAPR 357
            A++I+P 
Sbjct: 377 EAIRISPT 384



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P  P     +          S A    N   +         A  L   +    
Sbjct: 274 RRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPT----HADSLNNLANIKR 329

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G++  +     ++L++      A    A  L  Q K ++A +  ++  +++P    A+
Sbjct: 330 EQGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FAD 387

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 388 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 447

Query: 353 KIAPR 357
           K+ P 
Sbjct: 448 KLKPD 452



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 100/331 (30%), Gaps = 76/331 (22%)

Query: 133 ERQYNIAHEKLEMM-LQIPA-TREFAVYS------------LYFES--------CRIGDL 170
              +  A      +  Q P  T   A               L  E+           G L
Sbjct: 24  SGDFEAAERHCMQLWRQEPDNTAMLATRDDFFYTLAIKQNPLLAEAYSNLGNVYKERGQL 83

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILL 229
             A  +   AL + PD       +    V A +   A+       +   + +     +  
Sbjct: 84  QEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGN 143

Query: 230 IARSLENADKGDMIASYHD--------AIESLKLCDNSIMA------------------- 262
           + ++L   ++    A+            +++++   N  +A                   
Sbjct: 144 LLKALGRLEEAKPAAATSLTKSKNMACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIH 203

Query: 263 ----SICA----AKSLISQNKKRKAEVILEKIWK-------VNP-----HPEIANIYTH- 301
               ++        + I+     K   I ++          ++P     H  +A +Y   
Sbjct: 204 HFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQ 263

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360
            L +  +   +RA+ L        ++   ++    E G++ +A      A+++ P   + 
Sbjct: 264 GLIDLAIDTYRRAIEL---QPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADS 320

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              LA I++    N ++ +   + AL   P+
Sbjct: 321 LNNLANIKR-EQGNIEEAIQLYRKALEVFPE 350



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   + A E     L++  T   ++ +L       G++  A +   KAL++ P+
Sbjct: 291 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAIQLYRKALEVFPE 350

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 351 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 406

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 407 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 464

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 465 QIVCDWTDYDERMKKLVTIVADQLDKNRLPSVHPHH 500


>gi|283851848|ref|ZP_06369125.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283572764|gb|EFC20747.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 865

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 100/302 (33%), Gaps = 20/302 (6%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GYK L  GLM +       A+ + ++         E   +    Q         +A  +L
Sbjct: 279 GYKLL--GLMDLTRG--TTAQAVTNFERALRLRP-ESETHFFLAQAYERNGNLELAISEL 333

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +L        A   L   + ++   + A     + L   PD+      +   Y+  K+
Sbjct: 334 RQVLDASPRHLKARQMLANMNLKMDRTDEAIDELQRVLTYHPDSYEDKLLLGDLYLSRKD 393

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +++++ F         +     A   + + L   D G    +  +  +++      + A 
Sbjct: 394 FAKSLAFYEA----IPDGVEQSATAHLKKGLIFGDTGKPEQAEAELRQTIGQSPEFLEAR 449

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRL 317
           I        Q +  +A  +LE      P     H   A I+     ++  V  L++A  L
Sbjct: 450 IALVALYKQQQRLDEAASVLEAPGLSQPDVAQAHTIRAAIFLQQGRTDEAVALLEKAKTL 509

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNT 375
              N +       ++K   +    ++A  +    +   P+       L A +E   + + 
Sbjct: 510 ---NPKLATPYYTLAKFYSQRMEPEKAMDQYRQLLIQQPQSPSAHTALAAALEARGNFDE 566

Query: 376 DK 377
            +
Sbjct: 567 AQ 568



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 70/231 (30%), Gaps = 35/231 (15%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G  + A     KA  ++P        + + Y    E  +A+    Q      +    
Sbjct: 491 LQQGRTDEAVALLEKAKTLNPKLATPYYTLAKFYSQRMEPEKAMDQYRQLLIQQPQSPSA 550

Query: 225 RAILLIA-RSLENADKGD----MIASYHDAIESLKLC----------------------- 256
              L  A  +  N D+        A+   A   L+L                        
Sbjct: 551 HTALAAALEARGNFDEAQQHLEQAAASKQADAYLRLAGFLARRNKIDLAEQTLGQCLKEN 610

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL- 315
             SI A +  ++  ++   + K+   L  +  ++    IA     L  E    +  +A  
Sbjct: 611 SKSIPALVTLSRLQLAAGDETKSLATLRDVAAIDQKAAIAE---RLRRETAAKRWDQAEA 667

Query: 316 ---RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              +  E+   +    + ++ + L+   +  A      A+++ P      L
Sbjct: 668 EATKFIELAPAAAGGYITLASVKLQREDVPGAERLLRQALEVEPASIGARL 718


>gi|15893707|ref|NP_347056.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15023269|gb|AAK78396.1|AE007556_6 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|325507829|gb|ADZ19465.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018]
          Length = 376

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 86/268 (32%), Gaps = 48/268 (17%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
              ++++A E  +  L+        + ++      +     A  Y  ++L I+P+  +  
Sbjct: 21  LVDKHDLAIEYFKKSLEYKKDDFGVLINIAANYTVLKQYEKAIEYYERSLKIAPNDEFAM 80

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +     L +++  A    +   KN K+        L  + +     G+ + +      
Sbjct: 81  SEIGNLLFLKEDFKGAAKQFDNIVKNNKDNK----TALYNKGISLERAGEYLEAIECYDL 136

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
            +KL +  + A    A+      K ++A                   Y  +         
Sbjct: 137 LIKLDNKYMDAYYSKARVQEEIGKHKEAIS----------------TYIAI--------- 171

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI------FLLLA 365
                   + K+  E  + +S I   +G  D+A       +++ P + +       L+L 
Sbjct: 172 ------ANLKKDDGEPYLRISSIYNRIGFYDKALIYIEKLLEVDP-ERVIGYVDKALILI 224

Query: 366 QIEQANSHNTDKILYWTQSALHAM-PDP 392
             E+      +  L W   A+     DP
Sbjct: 225 STER-----YNDALEWINRAIKMENRDP 247


>gi|223934537|ref|ZP_03626458.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223897000|gb|EEF63440.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 718

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 121/381 (31%), Gaps = 59/381 (15%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-------WILLFA 60
            FV+ +   + +        + + W   L    P + L  +     A        I LF 
Sbjct: 353 VFVLGMSAAAVVW-GRKQRYLFVGWFWFLGTMVPVIGLVQVGIQAMADRYSYIPHIGLFI 411

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA-----------HNIPLARKMHSY 109
           V       P ML               L T +  IA             +        + 
Sbjct: 412 VLA--WGVPEMLASW----KQRMEVLVLTTTMALIACLALTLNQEKYWCDSVTLFTHATR 465

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---- 165
           V++ +      L + L+ Q      + + A    +  ++I           Y E+     
Sbjct: 466 VTKNNYLAYNNLGHWLDNQ-----GKPDEALANYQKSIEINPN--------YDEAQNNIG 512

Query: 166 ----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
               + G    A  Y   +L ++P+   V   +   Y    +   AI       K    +
Sbjct: 513 YVLAKKGKPEEAIPYYFSSLRLNPNRAEVHNNLGNAYADLGKLDEAIREYQAALKINTNY 572

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A       +  A KGD+  +     ++++L   ++ +          Q K   A +
Sbjct: 573 ----AEAYNGIGISLAKKGDLAGATRWLSDAIRLNPKNVSSHSNLGNVYAMQGKFDLAAI 628

Query: 282 ILEKIWKVNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             + + K NP     H  +AN+ +     +  +G+ + AL+L+    ++ E+   +    
Sbjct: 629 EYKLVLKQNPDDALTHNNLANLLSEQGKLDEAIGEYRSALKLKA---DNPEANYNLGLAL 685

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
           L     D+A      A+++ P
Sbjct: 686 LRQNKRDEARQHFNEALRLRP 706



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 5/82 (6%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
                +  L  LL  Q      + + A  +    L++ A    A Y+L     R    + 
Sbjct: 639 DDALTHNNLANLLSEQ-----GKLDEAIGEYRSALKLKADNPEANYNLGLALLRQNKRDE 693

Query: 173 AQRYATKALDISPDAPWVTEAV 194
           A+++  +AL + P+ P     +
Sbjct: 694 ARQHFNEALRLRPNYPEAQRQL 715


>gi|78187472|ref|YP_375515.1| TPR repeat-containing protein [Chlorobium luteolum DSM 273]
 gi|78167374|gb|ABB24472.1| TPR repeat [Chlorobium luteolum DSM 273]
          Length = 586

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/370 (13%), Positives = 102/370 (27%), Gaps = 57/370 (15%)

Query: 69  PAMLFHMLHKRNYDKGYKAL--YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126
           P  +              AL   T    ++   +  AR      +     +   L  L  
Sbjct: 74  PGAIKGYHELLRRQPLNAALYFSTAKAFLSLGELDSARVYAERCAALSPSNRHALGLL-- 131

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             ++ A  +   A +    +  +       +  L  E         A     + L + P 
Sbjct: 132 ADVSHAMGEPKRAVQLYGKLAHMDPGNTELLTWLAMEHLAAEQPAEALSVFQRVLSLDPG 191

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  V+   +  + +  AI  L +  K      R R  L           GD   + 
Sbjct: 192 NETARSHVLLLQIRMQRYPEAIASLREMTKGGNGDERLRLTL----GGLYLRTGDYADAA 247

Query: 247 HDAIESLKLCDNSIMASIC--------------AAKSLISQNKKRKA------------- 279
               E++      I A +                +  L   +  R A             
Sbjct: 248 STFREAIDASPGFIPAWLALFEVSVRSKDMMSFRSDLLSFYDTLRPALPKKLELTRFYLS 307

Query: 280 EVILEKIWKV----------NPHPEIANI-----YTHLLSENTVGKLKRALR---LEEIN 321
           E + + ++++            HPE A       +  + +++  G L+       L++ N
Sbjct: 308 ESVSDSLYRIPSRIMLDETCRRHPESAEALMLRGWARMRADDLGGALRDFRAAVPLDQKN 367

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILY 380
            +  ES   +    L       A    + A +  P + + F +L       S    + + 
Sbjct: 368 SDLRES---LVSALLVSRQFSAAQRVVLRARRDFPSERLRFQILEGYVLYESGKARQAVP 424

Query: 381 WTQSALHAMP 390
             + AL +  
Sbjct: 425 LLEQALRSRR 434



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 46/162 (28%), Gaps = 8/162 (4%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +     A       S       E     L      A   +  A +    +L+        
Sbjct: 38  SGPARKAEMAARSDSLDAVMERE----FLRASFLDARGDHPGAIKGYHELLRRQPLNAAL 93

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            +S       +G+L+SA+ YA +   +SP        +        E  RA+  L  K  
Sbjct: 94  YFSTAKAFLSLGELDSARVYAERCAALSPSNRHALGLLADVSHAMGEPKRAVQ-LYGKLA 152

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +    N     LL   ++E+        +       L L   
Sbjct: 153 HMDPGNTE---LLTWLAMEHLAAEQPAEALSVFQRVLSLDPG 191


>gi|118477072|ref|YP_894223.1| TPR repeat-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|229183813|ref|ZP_04311030.1| hypothetical protein bcere0004_13810 [Bacillus cereus BGSC 6E1]
 gi|118416297|gb|ABK84716.1| TPR-repeat-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|228599662|gb|EEK57265.1| hypothetical protein bcere0004_13810 [Bacillus cereus BGSC 6E1]
          Length = 434

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKIDELSVPFYVELANIAAKL 298

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|228926649|ref|ZP_04089718.1| hypothetical protein bthur0010_13650 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228945218|ref|ZP_04107574.1| hypothetical protein bthur0007_13810 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229090580|ref|ZP_04221815.1| hypothetical protein bcere0021_14050 [Bacillus cereus Rock3-42]
 gi|229121161|ref|ZP_04250398.1| hypothetical protein bcere0016_14670 [Bacillus cereus 95/8201]
 gi|228662280|gb|EEL17883.1| hypothetical protein bcere0016_14670 [Bacillus cereus 95/8201]
 gi|228692783|gb|EEL46507.1| hypothetical protein bcere0021_14050 [Bacillus cereus Rock3-42]
 gi|228814453|gb|EEM60718.1| hypothetical protein bthur0007_13810 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228833025|gb|EEM78593.1| hypothetical protein bthur0010_13650 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 434

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|71898753|ref|ZP_00680922.1| heat shock protein [Xylella fastidiosa Ann-1]
 gi|71731518|gb|EAO33580.1| heat shock protein [Xylella fastidiosa Ann-1]
          Length = 392

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/389 (12%), Positives = 113/389 (29%), Gaps = 44/389 (11%)

Query: 60  AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107
               F     A L   +  R      G+  +         GL  + +     A ++    
Sbjct: 7   WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 66

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163
           + + ++       L +L   +      + + A    + + + P      + FA+ +L  +
Sbjct: 67  AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 121

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222
             + G L+ A+   T+   I   AP     ++  Y   ++W +AI   +  +    +   
Sbjct: 122 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVVTGEPMG 181

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +  A      +  +        +      + +    S+ A I   +          A   
Sbjct: 182 KLIAQFECELADRSRASNQHDRALEAVSRAYQADATSVRAGIIEGRIEADLGHHEAAVRA 241

Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333
            E+  + +P       P +   Y  +        +  A        E    +   + +++
Sbjct: 242 WERAARHDPEYLPEIIPSLLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 295

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391
           +        QA       +K  P       L  +  A+  +    LY  +     +   +
Sbjct: 296 LIESQEGPAQARVYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 355

Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417
           P +       G  +  W    P  K    
Sbjct: 356 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 382


>gi|168007614|ref|XP_001756503.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692542|gb|EDQ78899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 809

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 20/223 (8%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAIL- 228
             A      A+ + P        V         +  A T   +  +  +E     + IL 
Sbjct: 251 EQALISFQLAVQLKPQDVRAHFLVGNSLYSLGRYEEARTSYQKALEAGEENAQEWQGILP 310

Query: 229 --LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              +   +    +G ++ +     E+  L      A      +L    + R A+  LE+ 
Sbjct: 311 QVHVNLGIALEGEGMLMCACDHYREAAILNPRHYRALKLLGSALFGLGEYRAAQKCLEEA 370

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             + P     H ++ +   H L ++    L+   +  ++N   V++L  +  +  + G  
Sbjct: 371 LVLKPDYTDAHCDLGSA-LHALHDDEQAILE-FQKTIDLNPNHVDALYNLGGLLKDSGRY 428

Query: 342 DQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKI 378
           ++A       +++ PR           LL         ++ K 
Sbjct: 429 ERAAEMYAKVIQLRPRDWRAQLNRAVSLLGA---GEQEDSRKA 468


>gi|74316214|ref|YP_313954.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74055709|gb|AAZ96149.1| conserve hypothetical protein containing TPR repeat [Thiobacillus
           denitrificans ATCC 25259]
          Length = 927

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 81/260 (31%), Gaps = 7/260 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
             + S  + +       LV+       L ++    A    E  L++      A  +L   
Sbjct: 454 AALASIAALEKKEGANPLVWNYRGAAYLGKQDKVRARASFEEALKLDRGFFPAAANLAQL 513

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +     +A++     L   P       A+ +  + + +      +L +      +   
Sbjct: 514 DLQEKRPAAARQRFESILAADPKHLGAMLALAELALRSGDEKTHTRWLEKAAAAHPQAQE 573

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            R    +A       KG        A E++ L  +S  A      + ++      A    
Sbjct: 574 PR----LALGSHLLRKGSAAQGLTVAREAVNLAPDSPAALELLGSAQLALGDSANALASY 629

Query: 284 EKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            K+ +  P    P     Y   ++++  G  +      +   +  ++ +++ +I +E   
Sbjct: 630 RKLVERQPDQAAPLAKLAYAQWVAKDAAGARRSLQAALQREPDFRDAQLLLGRIEIEAER 689

Query: 341 IDQAHAKAMLAMKIAPRKEI 360
            + A+  A       P +  
Sbjct: 690 FEAAYRIARRMQAQKPEQAA 709



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 54/196 (27%), Gaps = 11/196 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G    A       L I+P  P    A+    +     + A   ++        +  + 
Sbjct: 211 ASGKSAEATATYRDILRIAPRHPNARLALAGIALAENRLAEARKEVDGALA----FTPSS 266

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                 R+L +  +G    +       LK     + A         +    + AE    K
Sbjct: 267 LQAHYLRALIDFKEGKTERARDGLAAVLKSAPEFLPALQLGGTVEYALGNLQTAEAHFNK 326

Query: 286 IWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           + +  PH       +A     +   +   +          N +   +L +  +IAL    
Sbjct: 327 VVQAAPHDPYAVRLLAATQLRMGRFDDAART--IGVALRRNADDPAALTVAGEIALAKRD 384

Query: 341 IDQAHAKAMLAMKIAP 356
             QA      A    P
Sbjct: 385 FAQAARYFEDAASRDP 400



 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 85/269 (31%), Gaps = 7/269 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + +   A      A  +L+  L        A + L        DL +A++   +A +   
Sbjct: 35  QAKKMAAAGDDKSAIIQLKNALAADEDDAEARFELGKLYLARLDLAAAEKEFRRAREAGY 94

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            A      + +  +  + + R +  L      + +       L   R+      G    +
Sbjct: 95  PAAAANVMIARALLGQRAFQRLLDELPAPSGKSDDA----LALHALRATAELGLGRKDDA 150

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL- 303
                ++      +    +  A+   +  K   A   +++  +++P H +   +   LL 
Sbjct: 151 RKTLAQAQADAPRNAEVQLALAQLAAADGKPADAMKAVDEALQIDPAHRDSLLLKGDLLY 210

Query: 304 -SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            S  +         +  I      + + ++ IAL    + +A  +   A+   P      
Sbjct: 211 ASGKSAEATATYRDILRIAPRHPNARLALAGIALAENRLAEARKEVDGALAFTPSSLQAH 270

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPD 391
            L  +       T++      + L + P+
Sbjct: 271 YLRALIDFKEGKTERARDGLAAVLKSAPE 299



 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 90/303 (29%), Gaps = 18/303 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G   +   +   AR       +           L   Q+ L E++   A ++ E +L  
Sbjct: 476 RGAAYLGKQDKVRARASFEEALKLDRGFFPAAANL--AQLDLQEKRPAAARQRFESILAA 533

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A+ +L   + R GD  +  R+  KA    P A     A+    +     S A  
Sbjct: 534 DPKHLGAMLALAELALRSGDEKTHTRWLEKAAAAHPQAQEPRLALGSHLLRKG--SAAQG 591

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               ++      +   A+ L+  +      GD   +     + ++   +        A +
Sbjct: 592 LTVAREAVNLAPDSPAALELLGSA--QLALGDSANALASYRKLVERQPDQAAPLAKLAYA 649

Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
                    A   L+   +  P        +  I           ++ R  R++    E 
Sbjct: 650 QWVAKDAAGARRSLQAALQREPDFRDAQLLLGRIEIEAERFEAAYRIAR--RMQAQKPEQ 707

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380
               V+    A        A A    A  IAP          +L+ +++A      +IL 
Sbjct: 708 AAGFVLEGDTAFVQKDFPAALAAFEHAHAIAPSSATLARQHRVLSALQRAPEG-EKRILA 766

Query: 381 WTQ 383
           W  
Sbjct: 767 WLS 769



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 88/285 (30%), Gaps = 8/285 (2%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 ++     +  +IALA+R +  A    E               L      +GD  
Sbjct: 361 ALRRNADDPAALTVAGEIALAKRDFAQAARYFEDAASRDPGNAAIRTELGISRLGLGD-E 419

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A      A  +          ++   +  K++  A+  +   +K          ++   
Sbjct: 420 RALADLRTAAGMEGAGSRAHTFLILDGLKRKQFDAALASIAALEKK----EGANPLVWNY 475

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           R      K D + +     E+LKL      A+   A+  + + +   A    E I   +P
Sbjct: 476 RGAAYLGKQDKVRARASFEEALKLDRGFFPAAANLAQLDLQEKRPAAARQRFESILAADP 535

Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                 +A     L S +     +   +    + ++ E  + +    L  GS  Q    A
Sbjct: 536 KHLGAMLALAELALRSGDEKTHTRWLEKAAAAHPQAQEPRLALGSHLLRKGSAAQGLTVA 595

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
             A+ +AP     L L    Q    ++   L   +  +   PD  
Sbjct: 596 REAVNLAPDSPAALELLGSAQLALGDSANALASYRKLVERQPDQA 640



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 79/266 (29%), Gaps = 42/266 (15%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G        A +A++++PD+P   E +    +   + + A+    +  +   +    
Sbjct: 583 LRKGSAAQGLTVAREAVNLAPDSPAALELLGSAQLALGDSANALASYRKLVERQPD---- 638

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A  L   +       D   +      +L+   +   A +   +  I   +   A  I  
Sbjct: 639 QAAPLAKLAYAQWVAKDAAGARRSLQAALQREPDFRDAQLLLGRIEIEAERFEAAYRIAR 698

Query: 285 KIWKVNP--------------------------------HPEIANIYTHLLSENTVGKL- 311
           ++    P                                 P  A +       + + +  
Sbjct: 699 RMQAQKPEQAAGFVLEGDTAFVQKDFPAALAAFEHAHAIAPSSATLARQHRVLSALQRAP 758

Query: 312 ---KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
              KR L     + +   + +++++  ++      A    ++  K AP   + L      
Sbjct: 759 EGEKRILAWLSTHADDAPARLLLAESLIKRHEYAAAARHYLVLHKKAPDDLVVLNNLAWA 818

Query: 369 QANSHNTDKILYWTQSALH-AMPDPL 393
              S +  + L +   AL     DP 
Sbjct: 819 LHQSKD-ARALGYATRALKLRPEDPA 843


>gi|223935536|ref|ZP_03627453.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223895946|gb|EEF62390.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 1072

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 91/292 (31%), Gaps = 21/292 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATR 153
                A+ +  +      +      +       +       A     + L +    P  +
Sbjct: 311 GKGDSAKALAEFEKTVRLYPQSPQAFYHLALAQMVANDSPKALGSLKQALALNRSYPEAQ 370

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             +         R GDLNSA    T+ +   P        + + Y     ++ A+   +Q
Sbjct: 371 LLS----AEIYIRSGDLNSAVALLTQLVRQQPRLVQAQLLLAEAYRARGNYAEALGIYDQ 426

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +++   +      +  A  L          +     + L +  +++ A        I  
Sbjct: 427 LRQS---FPHEPQYVYKA-GLTFIQMNKKEEAQKAFEKVLVMSPDNLPALEQIVNLDIQA 482

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVES 327
               KA  +L+K        PE+  +   +      ++  V  LKRA+ L   N +   +
Sbjct: 483 QDYSKALSLLDKEMANEKIVPELCVLQARIFESQKATQKAVAALKRAIEL---NPQMRIA 539

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             +++++ +E    +QA       M   P+    L++    +    N     
Sbjct: 540 YFLLARLYMESKQNEQAITNLQEVMVKNPKDTSALMMIGTIRDQEKNFAAAR 591



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 96/272 (35%), Gaps = 18/272 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATK-ALDISPDAP 188
           +     A E +   L I         A+ +L+     + +   A + A   A   SP   
Sbjct: 176 QNNLKGAEEAINRALDIDKKFGPAYLALANLHLIKNEVKEAEQALKAAADNASAHSPRR- 234

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            V  A+ +      E  +    L    +K        +A+   A S +  D+     +  
Sbjct: 235 -VRYALFKIQ--HGEMEQGKVLLKAIVQKTPDNLPAWQALAETALSEKQFDE-----AMA 286

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLS 304
              + L     +        ++ + +    KA    EK  ++ P    A        +++
Sbjct: 287 IIDKVLIRDPENFDFLQLHGRTYLGKGDSAKALAEFEKTVRLYPQSPQAFYHLALAQMVA 346

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
            ++   L    +   +N+   E+ ++ ++I +  G ++ A A     ++  PR  +  LL
Sbjct: 347 NDSPKALGSLKQALALNRSYPEAQLLSAEIYIRSGDLNSAVALLTQLVRQQPRLVQAQLL 406

Query: 364 LAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395
           LA+  +A  +  + +  + Q       +P ++
Sbjct: 407 LAEAYRARGNYAEALGIYDQLRQSFPHEPQYV 438



 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 86/243 (35%), Gaps = 14/243 (5%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L YL        ++   +A    E+M+  P+T +   + L+ ++       +A     +A
Sbjct: 611 LAYLYSEHFNQLDKALEMARRARELMVYDPSTADTLGWILFKKAQ----YAAALTLNREA 666

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENAD 238
            D  P  P +   V   Y +  +   A  +L +  +   ++  +   ++ L   +++   
Sbjct: 667 ADKLPGEPEIQFHVGMGYYMLGKEESARLYLQRALQLKSDFFGHEEASLRLSILAIDPKS 726

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---- 294
            GD + S  +   +        +A    A         +KA    +K  K +P       
Sbjct: 727 GGDDVQSKLEKRIA--DQPEDEVALCRLAGIYERTGAFQKAADAYQKALKTSPDNAKVMA 784

Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +A +Y+  L+      L+ A     ++ E  +    +  IA        + +    A +
Sbjct: 785 SLALLYSDHLNNQQKA-LELAKNAHSLSPEDADISGALGHIAFLSRDYKWSLSLLQEADQ 843

Query: 354 IAP 356
            +P
Sbjct: 844 KSP 846



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 68/201 (33%), Gaps = 12/201 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           LYF + R+ +     +Y    L+  P        +      ++E  +    L +      
Sbjct: 104 LYFSAGRMKEAQEEVKYV---LEKRPQDQDAPMLLADLASTSQEVEQTRQALQKLLAAGG 160

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                +    +A S     + ++  +      +L +      A +  A   + +N+ ++A
Sbjct: 161 ----YKPACEVAISTLLIKQNNLKGAEEAINRALDIDKKFGPAYLALANLHLIKNEVKEA 216

Query: 280 EVILEKIW----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           E  L+         +P      ++     E   GK+     + +   +++ +   +++ A
Sbjct: 217 EQALKAAADNASAHSPRRVRYALFKIQHGEMEQGKV-LLKAIVQKTPDNLPAWQALAETA 275

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
           L     D+A A     +   P
Sbjct: 276 LSEKQFDEAMAIIDKVLIRDP 296


>gi|209523075|ref|ZP_03271632.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209496662|gb|EDZ96960.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 672

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 85/274 (31%), Gaps = 24/274 (8%)

Query: 136 YNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +  A +  +  +   P      +  +L       G    A  Y  +A+   PD+      
Sbjct: 91  WQDAVQAYDVALRLNPD--LVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQPDSFKAYYL 148

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +       ++WS A        +   E N     + +      A +G+   +      ++
Sbjct: 149 LGNALSGLEKWSAA----ETAYQRGAELNPQCDRIHVDLGNMLAQQGNWQPAIAAYQTAI 204

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENT 307
           K+   + +A      S     +  KA  + +K  ++NP     H  +      +   +  
Sbjct: 205 KINPKNELAYHKLGNSWFRLQEPEKAISVYKKAMEINPLTPWSHLPLGRSLLEVGKVQEA 264

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA----HAKAMLAMKIAP--RKEIF 361
           +    RA    E+N  S  +   +           QA            +  P   K ++
Sbjct: 265 IAICFRA---VELNPNSYWAYENLGDALSRNRRFSQAIPIYLQALQKVPEDRPGVSKSLY 321

Query: 362 LLLA-QIEQANSHNTDKILYWTQSALHAMPDPLW 394
             L   I + +  + DK   W    ++  PD  W
Sbjct: 322 RQLGYAIREQSQADVDKASQWLSEMINHPPDHNW 355



 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 84/263 (31%), Gaps = 45/263 (17%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           E +   A       L+          +L     + G+   A    T AL+I PD   V  
Sbjct: 20  EGKLEEAIACCNFALERQPYWPDGYKTLGLAYQKQGNFEQALIAYTNALEIKPDFAEVYG 79

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW------------------------------- 221
            +   Y   K W  A+   +   +   +                                
Sbjct: 80  NLGSLYAEHKLWQDAVQAYDVALRLNPDLVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQ 139

Query: 222 -NRNRAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +  +A  L+  +L   +K      +Y    E    CD      +     L  Q   + A
Sbjct: 140 PDSFKAYYLLGNALSGLEKWSAAETAYQRGAELNPQCDR---IHVDLGNMLAQQGNWQPA 196

Query: 280 EVILEKIWKVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
               +   K+NP  E+A      + +     E  +   K+A+   EIN  +  S + + +
Sbjct: 197 IAAYQTAIKINPKNELAYHKLGNSWFRLQEPEKAISVYKKAM---EINPLTPWSHLPLGR 253

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
             LE+G + +A A    A+++ P
Sbjct: 254 SLLEVGKVQEAIAICFRAVELNP 276


>gi|153874560|ref|ZP_02002733.1| heat shock protein [Beggiatoa sp. PS]
 gi|152068976|gb|EDN67267.1| heat shock protein [Beggiatoa sp. PS]
          Length = 386

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 66/163 (40%), Gaps = 5/163 (3%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + N A    + ++      P  R  A++ L  +    G L+ A+    + +  +     
Sbjct: 81  GEVNRAIRIHQNLMARQSLEPQQRSLAMFELGEDYQSAGLLDRAESLFQELVTSNTHQVL 140

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +++ Y    +W +AI    +    + +  +   A     ++ +   +G+  A+   
Sbjct: 141 ALRQLLEIYQQEHDWEKAIRTAQKLHHASNEPLSPVIAQYYCEQAQDYIAQGNSHAAQQT 200

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             ++LK   N + AS+   +  + Q+  +KA +  +++ + NP
Sbjct: 201 IQQALKTDSNCVRASLLEGQLALEQDNPKKAIIAFKRVEEQNP 243


>gi|307719874|ref|YP_003875406.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306533599|gb|ADN03133.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 839

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 7/179 (3%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G   L  G++++       A++  +   +      E L  L    I   E  +  A E  
Sbjct: 46  GVHLLS-GMIALRQDRNEEAKEAFTKALELGGEEAEALNNL--GVIYRKEGDHRKAIEYF 102

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
              L     R   +Y+L       G    A+    KAL+  P        +   Y     
Sbjct: 103 RKALAADPDRPDILYNLANACKDAGLFEEAEAAYRKALEHDPHLVSAYNNLATLYQQRGA 162

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             +A+  L +      +       LL    +    +G    +      +L+     + A
Sbjct: 163 IDKAVAVLEKGLTADPD----HPTLLYNLGVLYQREGRYEEARASFHRALQKRPGWVEA 217


>gi|311234841|gb|ADP87695.1| diguanylate cyclase [Desulfovibrio vulgaris RCH1]
          Length = 808

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 21/194 (10%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            ++  A    E  LQ       A+Y+L      +G+   A++   K L  +P   +    
Sbjct: 622 GRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVR 681

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + Q     K +++A  + N+  +          ++    +  +  +G    +     ++L
Sbjct: 682 LGQLAEGEKRYAQARQYFNKAARAGDSG----GLVHRNLARLSMRQGRPDEAREHLHDAL 737

Query: 254 KLCDNSIMASICAAKSLISQNK--------KRKAEVI---LEKIWKVNPHPEIANIYTHL 302
                  +A    A+  +   +         R++  +   L++ W      E+A      
Sbjct: 738 LRNPQDAVALQLMARLYLDGGEDPAMAEALSRQSVALRPDLKQGWL-----ELARA-LDA 791

Query: 303 LSENTVGKLKRALR 316
                  +  R   
Sbjct: 792 RGHVAEAREARLRA 805



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 5/155 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                ARK +    +    H   LV L   Q+A  E++Y  A +      +   +     
Sbjct: 656 GETAEARKQYRKCLKYAPGHVFALVRL--GQLAEGEKRYAQARQYFNKAARAGDSGGLVH 713

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L   S R G  + A+ +   AL  +P      + + + Y+   E   A+     ++  
Sbjct: 714 RNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYLDGGE-DPAMAEALSRQSV 772

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A   +  +  L +AR+L+   +G +  +    + +
Sbjct: 773 ALRPDLKQGWLELARALD--ARGHVAEAREARLRA 805



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 41/226 (18%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A      AL           ++            A  +  Q  +          +
Sbjct: 588 GDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKP----GDPM 643

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L          G+   +     + LK     + A +   +   ++ +KR A+       
Sbjct: 644 ALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQL--AEGEKRYAQ------- 694

Query: 288 KVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                   A  Y +    + ++ G + R                 ++++++  G  D+A 
Sbjct: 695 --------ARQYFNKAARAGDSGGLVHR----------------NLARLSMRQGRPDEAR 730

Query: 346 AKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMP 390
                A+   P+  + L L+A++   +      +         A+ 
Sbjct: 731 EHLHDALLRNPQDAVALQLMARL-YLDGGEDPAMAEALSRQSVALR 775


>gi|315185862|gb|EFU19627.1| restriction endonuclease [Spirochaeta thermophila DSM 6578]
          Length = 456

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 98/337 (29%), Gaps = 53/337 (15%)

Query: 40  SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99
           +  ++L      +   IL    + + LS P        +R   +  +A+           
Sbjct: 3   ALPLLLPAAIVLIGLVILAVYFNLYVLSDPEK----KAERKKRRDRQAI----------- 47

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATR---- 153
                 +     +      +    ++  +    ++++  A +  +++ +     T+    
Sbjct: 48  ------LKKAQRRLAQNPRDPEALVVLAEAYFEDQEWEKALKLYQVLAEGVTDRTKVDEY 101

Query: 154 -EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  +   + R+G    A +    A  + P+A  V   +     L   +  A+  L+
Sbjct: 102 EVQVRRGVC--AFRLGRHEEAYQAFAVAYSLKPEAFEVRFHMGALEYLRGAYEHAVKLLS 159

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  E    R  L    SL     G    +       L    +        A  L +
Sbjct: 160 AAAAQQPEHPETRRYL----SLALHRSGKYKEALPSIRAILNEMPDDKELLFAYADCLAN 215

Query: 273 QNKKRKAEVI-----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-- 325
             +K +A  I     +++ W           +   L    + + +RA++  EI       
Sbjct: 216 LGQKEQALSIFTHLRVDEQWGPQ------ACFRAGLINLGLHRYERAIKDLEIGVRHRGM 269

Query: 326 ------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 E    +++  +    I +A        +  P
Sbjct: 270 DNQLRLEMEYRLAQAYIHQKEIRKAVEHLRAVQRTNP 306


>gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE]
 gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 348

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 17/265 (6%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPATREF-A 156
           ++  A K ++   +    H + ++ L      LA    + A    + M  + P + E  A
Sbjct: 74  DLDNAVKEYNETLRLKPDHLDAMLNL--ANAYLAMGNADDALGLFKDMIAKNPESAEVFA 131

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            + +       G L+ A+    KA+   P +      +   Y+   E   AI    ++ +
Sbjct: 132 SFGVALA--SAGYLDDAEEMLKKAIAKDPRSFDGHLFLAGVYMDKGEVDDAI----KEYR 185

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A   +     +        ++KG  + +      ++ L    + A    A  L  QN+ 
Sbjct: 186 IAATISPEEPSVFYNWGFALSEKGLTMDAIEKYQIAVHLDPGFVEARYNLASMLAKQNRL 245

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +A   L++  K +P     H  +  IYT    E T   +       +++ +   +   +
Sbjct: 246 DEAITELKETIKADPSFADAHNMLGVIYTA--KEFTRAAINELEEAVKLDPDFAVAYNNL 303

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356
             +       D+A      A+KI P
Sbjct: 304 GMVYYGQEQYDEAIKVFEQALKIDP 328


>gi|218780050|ref|YP_002431368.1| hypothetical protein Dalk_2207 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761434|gb|ACL03900.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 661

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 105/341 (30%), Gaps = 43/341 (12%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL+     +   A + ++         N+ L          A  +Y+ A    + ++
Sbjct: 221 LTMGLIYSKEGDHYAAVEQYTKAMVLDPGSNQALGR--RALAYAAAGEYDKALADAQKVV 278

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                +    Y L     +  +   A    TKAL+I+P+ P +         L  ++  A
Sbjct: 279 ADDPDKALGYYYLGSIYTQRNEPEKAYESYTKALEITPNEPALYLGQAHAARLKGDYDLA 338

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----S 263
           +   ++        +     L   R       G    +  D +++++L   S+       
Sbjct: 339 LKNADEAIALFPGKDS----LYFERGNIYEIMGQKPKALEDYLKAVELNPQSVQGHFRLG 394

Query: 264 ICAAKSLISQNKKRKAEVILE--------KIWKVNPHPEIA---------NIYTHLLSEN 306
           +  A+SL +Q        ++E          W+   +  +               L S++
Sbjct: 395 VNYAQSLANQKAYEHFSKVIEVNENHVMAYAWRAVINARLGKKAEGVSDSEKAVALKSDS 454

Query: 307 TV----------------GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +                  +++  +  ++N E   + +   K  +++     A      
Sbjct: 455 PLVLYFTGTAYGLLKMPEAAIRQLDKAVQLNPEYALAYMERGKAHMQLRQYRAAVRDLEK 514

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           A++  P      L A        +  K + W    L   PD
Sbjct: 515 AVQYNPDLCGAYLQAAYAARYMGDDLKTVDWLSQYLDCKPD 555



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 71/260 (27%), Gaps = 13/260 (5%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---R 166
            +      +  ++             +  A +           R  A Y     +     
Sbjct: 71  SAAAKLSPDNAVLLFQRGGAYARTGDHEQAVQDFTQ-AINMIARFPAAY--VQRAKSYAA 127

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +GD   A+     A+ + PD  W    +         + +A+ +  +  +   +     A
Sbjct: 128 LGDYEKARADFDAAIALLPDQAWPYREIAGFCSQQGNYGQALVYYLKALEIEPD----NA 183

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L+       AD G         + + K    S    +        +     A     K 
Sbjct: 184 ALMCLMGKAQADAGYPEKGIQTCLNAAKSDPQSAEPYLTMGLIYSKEGDHYAAVEQYTKA 243

Query: 287 WKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             ++P    A       +  +      L  A ++   + +       +  I  +    ++
Sbjct: 244 MVLDPGSNQALGRRALAYAAAGEYDKALADAQKVVADDPDKALGYYYLGSIYTQRNEPEK 303

Query: 344 AHAKAMLAMKIAPRKEIFLL 363
           A+     A++I P +    L
Sbjct: 304 AYESYTKALEITPNEPALYL 323


>gi|188501624|gb|ACD54747.1| tetratricopeptide 2-like protein [Adineta vaga]
          Length = 855

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 99/308 (32%), Gaps = 51/308 (16%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           +S+ + + P  R++   + ++     +    L  LL         Q++ A    E +L  
Sbjct: 401 LSLTSDDDPRLRQLTDCIREEIFPKKDPWYQLGELLIKM-----GQFDEAQHVYESLLST 455

Query: 150 PATR--EFA--VYSLYFESCRIGDLNSAQRYATKALDI-----SPDAPWVTEAVVQQYVL 200
              R  E       L     + GD  SA  ++ K L+I     S ++P  T   +    L
Sbjct: 456 KEVRQRELGDIYRQLSRVKEQQGDYESAVAFSEKGLEIVKKSFSSNSPEQTTFYIDLGSL 515

Query: 201 A---KEWSRAI----TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAI 250
                 +S+A+      L  +++     + +  I            G    +      A 
Sbjct: 516 NKKMGVYSKALTYYEKALEIQQQTLPPDHSDLPITYNYIGSIYEKMGQYSKALSFHEKAY 575

Query: 251 ESLKLC-----DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN----P--HPEIANIY 299
           E  K+       N    +           +  KA    E+ +++     P  HP +A  Y
Sbjct: 576 EIQKISRSTNSSNFATTNSYIGFVYEKMGEYSKALSSHERAYEIQKVNVPSNHPSLATAY 635

Query: 300 THLLS-----ENTVGKLKRALR--------LEEINKESVESLVIVSKIALEMGSIDQAHA 346
           ++L S      +    L    +        L   + +   S   +  +   M    +A +
Sbjct: 636 SNLGSVYEKMGDYPKALSYYEKALSIQQKSLLSNHPDLAASYNNIGSVYENMNEYSKALS 695

Query: 347 KAMLAMKI 354
               A++I
Sbjct: 696 YEEKALQI 703


>gi|300864445|ref|ZP_07109316.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300337589|emb|CBN54464.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 1129

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 18/229 (7%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFA---VYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             + +   A    +                ++L       G  + A +   +A+ + PD 
Sbjct: 430 QKQGKSAEAIAYFQK-TSDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQRAIAVKPDW 488

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                 +    +       AI +  +      +       L    +     +G    +  
Sbjct: 489 AEAYANIGSARMQQGNLEEAIQYYRKAIAIKPQLE----ALHFNIANALLHQGKYEEAIS 544

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI--WKVNPHPEIANIYTHL--- 302
           +  E++K   +   A      +   Q K  +A    ++   +K    P+ A +Y  +   
Sbjct: 545 NYQEAIKHKPDWPDAIANMGNAFSMQGKLEEAIATYQQALVYK----PDWAEVYCRMGHI 600

Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              +     +    +  E+N    E+   +  +     ++  A   A  
Sbjct: 601 QKQDRPGESIGYFEKAIELNPYFSEAHQQLCDLLSHSSNLAGARKVADK 649



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 60/165 (36%), Gaps = 5/165 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
               L E + + A +  +  + +      A  ++     + G+L  A +Y  KA+ I P 
Sbjct: 462 ANTLLTEGKRDEAIQSYQRAIAVKPDWAEAYANIGSARMQQGNLEEAIQYYRKAIAIKPQ 521

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              +   +    +   ++  AI+   +  K+  +W    AI  +  +     +G +  + 
Sbjct: 522 LEALHFNIANALLHQGKYEEAISNYQEAIKHKPDWP--DAIANMGNAFSM--QGKLEEAI 577

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               ++L    +              Q++  ++    EK  ++NP
Sbjct: 578 ATYQQALVYKPDWAEVYCRMGHIQ-KQDRPGESIGYFEKAIELNP 621



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 15/198 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G+   A      AL I PD       +        +   AI    Q  +    +   RA
Sbjct: 330 QGNFREAIASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRAYEQALEFEPNYAEVRA 389

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +           G +  +     +++ L  +         K    Q K  +A    +K 
Sbjct: 390 NIGSMY----FKMGHLEKAIVYYQQAIALKPDLAGVYWNLGKVFQKQGKSAEAIAYFQKT 445

Query: 287 WKVNPHP-------EIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             +NPH         +AN        +  +   +RA     +  +  E+   +    ++ 
Sbjct: 446 SDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQRA---IAVKPDWAEAYANIGSARMQQ 502

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G++++A      A+ I P
Sbjct: 503 GNLEEAIQYYRKAIAIKP 520



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 35/129 (27%), Gaps = 5/129 (3%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
               + +   A    +  ++  P   E           +      +  Y  KA++++P  
Sbjct: 566 AFSMQGKLEEAIATYQQALVYKPDWAEVYCR--MGHIQKQDRPGESIGYFEKAIELNPYF 623

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               + +      +   + A    ++  +   E      +   A        G    +  
Sbjct: 624 SEAHQQLCDLLSHSSNLAGARKVADKYCEYCGE--SVPVMSATAYVFSYLQSGVSELALQ 681

Query: 248 DAIESLKLC 256
             IE  KL 
Sbjct: 682 KLIEIEKLS 690



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G L++A     KA+  + +   +   + + Y+L  +   AI       K   ++   
Sbjct: 23  KEAGKLDAAADNYQKAISFNVEDAEIHRKLAEVYILKGQLDSAIASCKFALKVKPDF--A 80

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L +  +  + ++ +M  + H   ++L++  N   A            +  +A    +
Sbjct: 81  PAYLTMGNAFHSQEQLEM--AIHAYSQALEIDPNFAEAHANLGSMYYKLGRLDEAANSYQ 138

Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K    N  P +A++   L       E+    +    +   +    + +   +++   +  
Sbjct: 139 KALANN--PNLASVLLMLGNILQQQEDLGAAIACYQKSLVLQPGLLRNYYKLAEALTKSN 196

Query: 340 SIDQAHAKAMLAMKIAP 356
           ++D A +     +++ P
Sbjct: 197 NVDAAISCYQKVLQLQP 213


>gi|56750548|ref|YP_171249.1| hypothetical protein syc0539_c [Synechococcus elongatus PCC 6301]
 gi|81299815|ref|YP_400023.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
 gi|56685507|dbj|BAD78729.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81168696|gb|ABB57036.1| TPR repeat [Synechococcus elongatus PCC 7942]
          Length = 359

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 13/225 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y  A    E  L++   R  A   L     R G+L  A     +   + P+       
Sbjct: 120 GEYAAAERYYEQSLRLDNKRAEAYRGLATVQQRRGNLVGAINTYQRWQQLEPNNWQPRNE 179

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + + Y+  ++++ A+  L    + A       A +    ++      +  A+      S+
Sbjct: 180 MGKIYLQQRQFTNALQVLQAATRLAP----READIYSNLAIAQLGLNNPRAALTSLQSSI 235

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHL---LSENT 307
            L   +    + A    +    +  A     + +++N     A     YT +     + T
Sbjct: 236 SLDPRNPRTLLKAGDIYLVLGDREAANRNYRRAFELN--RNSAKTLDRYTQILLDQGDAT 293

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +  +     L  +   + +  + +    L  G   +A +    A 
Sbjct: 294 LATVYLRDAL-RLEPRNPDFHLRLGLAYLARGLKPEARSSLNQAA 337



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 94/277 (33%), Gaps = 22/277 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI-ALAERQYNIAHEKLE-- 144
           L  G+M + +     A    S    Q    N  L  LL+    A+ +R++  A    +  
Sbjct: 9   LAIGVMVLGS----PAIVSVSAQPAQAAVPNPELSRLLDAGSEAVKQRRWAEALGLYQQA 64

Query: 145 MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            ++     R  +    LY E   +GD   A     +A+ +              Y    E
Sbjct: 65  QLIDGQDARIASAIGYLYTE---LGDFRQAALSFERAIAMDSQTAAFAFGAATAYANLGE 121

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           ++ A  +  Q  +     +  RA      +     +G+++ + +      +L  N+    
Sbjct: 122 YAAAERYYEQSLR----LDNKRAEAYRGLATVQQRRGNLVGAINTYQRWQQLEPNNWQPR 177

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLE 318
               K  + Q +   A  +L+   ++ P    A+IY       L   N    L       
Sbjct: 178 NEMGKIYLQQRQFTNALQVLQAATRLAPRE--ADIYSNLAIAQLGLNNPRAALTSLQSSI 235

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++  +  +L+    I L +G  + A+     A ++ 
Sbjct: 236 SLDPRNPRTLLKAGDIYLVLGDREAANRNYRRAFELN 272


>gi|83816032|ref|YP_445721.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83757426|gb|ABC45539.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
          Length = 665

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 88/320 (27%), Gaps = 45/320 (14%)

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQ 135
           R     Y A      + A+     A+   +    +   H          L+ ++  A  +
Sbjct: 370 RRARSMYDA------ATASSPPDTAQLRAAAGVLRDVLHQSPDTEAALSLQAELYQAWGR 423

Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
              A   +E +L   P      V        R      A   A +   + P    +    
Sbjct: 424 PEEAGRAMERLLDLTPRAPGRWVR-TAQTYQRAHLYARAAGVAEEGFLLFPGHMPLARTA 482

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIES 252
               +   + ++A            +       A+L     L  +  G    +      +
Sbjct: 483 AFARLRTGDPAKARRHFQDALSLLGDSTGAAAEAVLHAGLGLAKSRLGRPREADDALKNA 542

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
             L           A+SL  Q+ +      L++                         L 
Sbjct: 543 RALAPQHPQVVRLYARSLARQDDR------LDQA------------------------LD 572

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQAN 371
            A +  E   +S  +   + ++      ++ A     +A+    P   +   L  +E A 
Sbjct: 573 LAEQAVENAPDSPSAHRALGQVQFRRDELEAARRHLRIALDAGGPSATLLERLGDVEAAL 632

Query: 372 SHNTDKILYWTQSALHAMPD 391
            ++T    YW Q AL   PD
Sbjct: 633 GNDTAAQTYW-QRALDRNPD 651



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 30/100 (30%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A    E  L+        + +L       G L++A  YA +A       P     
Sbjct: 138 GDYEEAISHFEAALEQVPEAPVLLLALADAHEAQGALSTALFYARRAQTQGSPRPSPYRR 197

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           + +    A + + A+    Q   +    N         ++
Sbjct: 198 LAEMQRAAGDPAAALRTYQQLLDHVPNANDAHRARAAIQA 237


>gi|251792149|ref|YP_003006869.1| hypothetical protein NT05HA_0353 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533536|gb|ACS96782.1| tetratricopeptide domain protein [Aggregatibacter aphrophilus
           NJ8700]
          Length = 396

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 36/189 (19%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +A   ++ A     +M+  P     
Sbjct: 91  GEVDRALRIHQALDNSPNYTFEQKLLAKQQLARDFMAVGFFDRAEHLYILMVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL           AV+ Q      W +AI    +  
Sbjct: 147 --------------------FAEGALQ--------QLAVIYQKTKE--WKKAINAAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K +   NR          ++N             +++LK+  N + AS+  A   I Q +
Sbjct: 177 KISPNSNRIELAHYYCEYVQNLPDESKEEPKQILLQALKVSPNCVRASMMLADLYIKQKE 236

Query: 276 KRKAEVILE 284
            + A  ILE
Sbjct: 237 YKSAVDILE 245


>gi|89899516|ref|YP_521987.1| hypothetical protein Rfer_0705 [Rhodoferax ferrireducens T118]
 gi|89344253|gb|ABD68456.1| Tetratricopeptide TPR_2 [Rhodoferax ferrireducens T118]
          Length = 924

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 10/253 (3%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +    ++     L  +  LA+   + A +  E  L I      AV SL           +
Sbjct: 464 EKKQPDKPFAAQLRARTLLAKNDVSGARKSFERALVIDPHYFPAVVSLAAIDLADKKPEA 523

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A++     LD  P       A+ +    A      +  L      A   +    +LLI  
Sbjct: 524 AKKRFEAVLDKDPKNGQAWLALAELASRAGASKDEVAKLIGSAVAANPTDVKSRLLLIDF 583

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-- 290
            L   D    +++  D + ++      + A     ++  +  +  +A     K+  +   
Sbjct: 584 DLRQRDFKAAVSAAQDGVATVPDSPELLDA---LGRTQQAAGEPNQAIASYTKLAALQPL 640

Query: 291 ---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
              PH  +A +  HL  +NT   L    R  EI  + +E+   +  +AL+    + A   
Sbjct: 641 SVLPHMRLAEV--HLAGKNTEAALASLRRALEIKPDLLEAQRALIALALDSKKPEDALTM 698

Query: 348 AMLAMKIAPRKEI 360
           A    +  P +  
Sbjct: 699 ARSVQQQRPEEAA 711



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 70/194 (36%), Gaps = 9/194 (4%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GDL  A+ Y  KA   SP       ++    +++     A   L      +         
Sbjct: 384 GDLKKAEDYFAKAAQQSPQDGRKRTSLALTRLVSGATDGAFDELQT-IAASDTGTSADLA 442

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+      +  + +   +        K   +   A+   A++L+++N    A    E+  
Sbjct: 443 LIS----VHLKRQEFDQALKAIDGLEKKQPDKPFAAQLRARTLLAKNDVSGARKSFERAL 498

Query: 288 KVNPH--PEIAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS-IDQ 343
            ++PH  P + +     L  +      KR   + + + ++ ++ + ++++A   G+  D+
Sbjct: 499 VIDPHYFPAVVSLAAIDLADKKPEAAKKRFEAVLDKDPKNGQAWLALAELASRAGASKDE 558

Query: 344 AHAKAMLAMKIAPR 357
                  A+   P 
Sbjct: 559 VAKLIGSAVAANPT 572



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 100/320 (31%), Gaps = 46/320 (14%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESC-RIGDLNSAQ 174
           +++    L   +  +A+     A  +++  +   P   E     L   +    GD   A+
Sbjct: 25  NDKPEAMLSSAKDYMAKNDNKAAVIQIKNALQSNPDLPEA--RYLLGSALLDTGDPAGAE 82

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               KALD+      V   + +  +      +A     +  K        +A L I+ + 
Sbjct: 83  LELRKALDLKHPQDAVVPQLAKALLAQG---KARKVTEEFAKTELGAASAKASLQISLTS 139

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--- 291
             A +G+   +      +L        A +  A+    Q +  +A  + E++   +P   
Sbjct: 140 AYAMQGEREQAQASLQAALLADPGFAPALLVQARQKAGQREFDQALALTEEVLAKSPRST 199

Query: 292 ---------------HPEIANIY----THLLSENTVGKL----------------KRALR 316
                           P+ A         +  +    ++                ++   
Sbjct: 200 EAWVFKGDLLLHVKNQPDEALAAYRKALEIKPDFMPAQVSVITLLLQQGKLVETQQQIEH 259

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
           L++      ++  + ++ A +      A       +++ P+    L LA + +   +   
Sbjct: 260 LKKTAARHPQTQFLEAQWAYQKKDFKLARQLLQQVLQLVPKSAQGLQLAGLVELQLNALP 319

Query: 377 KILYWTQSALHAMPDPLWIS 396
               +   A+   P+  W++
Sbjct: 320 AAQDYLSRAVQGAPE-SWLA 338



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 27/272 (9%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------IPATR 153
              A+ +++ +      H +  +  +  ++ L       A +      Q         T 
Sbjct: 350 GQAAQALNALLPGLSQEHVDPNLLSVAGEVYLLNGDLKKAEDYFAKAAQQSPQDGRKRTS 409

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--- 210
                         G  +  Q  A      S        A++  ++  +E+ +A+     
Sbjct: 410 LALTR--LVSGATDGAFDELQTIAASDTGTS-----ADLALISVHLKRQEFDQALKAIDG 462

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L +K+ +     + RA  L+A       K D+  +      +L +  +   A +  A   
Sbjct: 463 LEKKQPDKPFAAQLRARTLLA-------KNDVSGARKSFERALVIDPHYFPAVVSLAAID 515

Query: 271 ISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKL-KRALRLEEINKESVE 326
           ++  K   A+   E +   +P      +A       +  +  ++ K        N   V+
Sbjct: 516 LADKKPEAAKKRFEAVLDKDPKNGQAWLALAELASRAGASKDEVAKLIGSAVAANPTDVK 575

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           S +++    L       A + A   +   P  
Sbjct: 576 SRLLLIDFDLRQRDFKAAVSAAQDGVATVPDS 607



 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 7/154 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +AA     A K  S   ++      +L++L     ALA + Y  A +    ++++     
Sbjct: 754 VAAGQGAEADKFSSSWQKEQPKDGAFLLHL--GDAALARKDYASAEKNYAAVVKLQPNSA 811

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A  +L + S ++     A  +A KA  ++P+ P   + +        E+++A+   N+ 
Sbjct: 812 LAYNNLAWVSGKLN-KEGAVGFAEKANALAPNQPAFMDTLAVLLSDKGEYAKAVALQNKA 870

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                      A+  +  +  +   G    +  +
Sbjct: 871 LALQP----QNALFKLNLAKIHIKGGKKDLARKE 900



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 89/295 (30%), Gaps = 35/295 (11%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
                LE Q A  ++ + +A + L+ +LQ+       +        ++  L +AQ Y ++
Sbjct: 268 PQTQFLEAQWAYQKKDFKLARQLLQQVLQLVPKSAQGLQLAGLVELQLNALPAAQDYLSR 327

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+  +P++     A+V  Y+ A + ++A+                   LL          
Sbjct: 328 AVQGAPESWLARRALVISYMRAGQAAQAL----NALLPGLSQEHVDPNLLSVAGEVYLLN 383

Query: 240 GDMIASYHDAIESLKLCDN---------SIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           GD+  +     ++ +                    A      + +   A           
Sbjct: 384 GDLKKAEDYFAKAAQQSPQDGRKRTSLALTRLVSGATDGAFDELQTIAASDTGTSA---- 439

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              ++A I  HL  +     LK    LE+   +   +  + ++  L    +  A      
Sbjct: 440 ---DLALISVHLKRQEFDQALKAIDGLEKKQPDKPFAAQLRARTLLAKNDVSGARKSFER 496

Query: 351 AMKIAP-RKEIFLLLAQI--------------EQANSHNTDKILYWTQSALHAMP 390
           A+ I P      + LA I              E     +      W   A  A  
Sbjct: 497 ALVIDPHYFPAVVSLAAIDLADKKPEAAKKRFEAVLDKDPKNGQAWLALAELASR 551



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 91/309 (29%), Gaps = 55/309 (17%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            A    +         +  L+  L  +   A  + N A      +  +          L 
Sbjct: 591 KAAVSAAQDGVATVPDSPELLDAL-GRTQQAAGEPNQAIASYTKLAALQPLSVLPHMRLA 649

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-------------------------- 195
                  +  +A     +AL+I PD      A++                          
Sbjct: 650 EVHLAGKNTEAALASLRRALEIKPDLLEAQRALIALALDSKKPEDALTMARSVQQQRPEE 709

Query: 196 --------QQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLIARSLENADKGDMIA 244
                     +   K W RAIT      K+ K      +  A L+ A     ADK     
Sbjct: 710 AAGYALEGDIHASQKSWDRAITVYRGGLKHVKAPELAIKLHAALVAAGQGAEADKFSSSW 769

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IY 299
                 +   L        +    + +++     AE     + K+ P+  +A      + 
Sbjct: 770 QKEQPKDGAFL--------LHLGDAALARKDYASAEKNYAAVVKLQPNSALAYNNLAWVS 821

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L  E  VG  ++A  L          +  ++ +  + G   +A A    A+ + P+  
Sbjct: 822 GKLNKEGAVGFAEKANALA---PNQPAFMDTLAVLLSDKGEYAKAVALQNKALALQPQNA 878

Query: 360 IFLL-LAQI 367
           +F L LA+I
Sbjct: 879 LFKLNLAKI 887


>gi|291565616|dbj|BAI87888.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 2281

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 86/255 (33%), Gaps = 42/255 (16%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR--------------- 206
            +  + G +  A     + ++++PD  W    + +     ++W                 
Sbjct: 14  NQLLQQGKIQEAVAEYRRGIELTPDLSWHHYYLGEALTQLEDWEGAVQAYRQAISLGSNY 73

Query: 207 ------------------AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                             AI  LNQ  +   ++ +    L + ++L +   G+  A+   
Sbjct: 74  LCYYRLGVALVKLELWDEAIATLNQGLELKPDYYKF--YLPLGQALVHQQHGE--AAIEA 129

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSE 305
             +++ L       ++     L  Q +  +A   L++        P  ++      + + 
Sbjct: 130 YGKAVALKPGVAEFNLQLGHLLRRQGRFTEAVGYLQQAADFQGDDPQLQLGLGVALVEAG 189

Query: 306 NTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL- 363
             + +      R  E+  +  E+   + K+    G  D+A A    + +I P+   + L 
Sbjct: 190 TDLQRAEASLRRSLELQPDQGEAYFYLGKLEGLRGRWDEALAMYRRSWEINPQVGEWGLA 249

Query: 364 LAQIEQANSHNTDKI 378
           LA+  +     ++ +
Sbjct: 250 LAEALEKLGRWSEAV 264



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 93/283 (32%), Gaps = 26/283 (9%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKL 143
           Y  L   L+        +     +   +      N  L +LL  Q      ++  A   L
Sbjct: 110 YLPLGQALVHQQHGEAAIEAYGKAVALKPGVAEFNLQLGHLLRRQ-----GRFTEAVGYL 164

Query: 144 EMMLQ----IPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           +         P  +      L       G DL  A+    ++L++ PD       + +  
Sbjct: 165 QQAADFQGDDPQLQL----GLGVALVEAGTDLQRAEASLRRSLELQPDQGEAYFYLGKLE 220

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
            L   W  A+    +  +   +       L +A +LE    G    +     + +     
Sbjct: 221 GLRGRWDEALAMYRRSWEINPQVGEWG--LALAEALEKL--GRWSEAVDQYRQVVLELGE 276

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKV---NP--HPEIANIYTHLLSENTVGKLKR 313
           S  AS+   ++L+   +  +A V L +  K+    P  H   A +   L        +++
Sbjct: 277 SGEASLGLGRALVQLERPVEAVVELRRAVKLGVDRPEVHRLWAGVLVEL--GRWPDVVEQ 334

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              L E    + +    ++   + +G   +A A+     ++AP
Sbjct: 335 WQWLLERYPGAADMRRRLALALMGLGRWPEAAAQWGEYWRVAP 377


>gi|183222246|ref|YP_001840242.1| TPR repeat-containing signal peptide [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912298|ref|YP_001963853.1| TPR repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776974|gb|ABZ95275.1| TPR-repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780668|gb|ABZ98966.1| TPR-repeat-containing protein; putative signal peptide [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 1197

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 100/308 (32%), Gaps = 57/308 (18%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           N   A       S+    +     +L   Q  L   +   + E  +  + +  T   A  
Sbjct: 243 NYTEATAEFKKASELQPQNGSVWSFLGNAQ--LLNGKLKESEESFKKSISLSDTNANAYV 300

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW--------------VTEAVVQQY------ 198
            L     +  + +   + + +AL   P                  V +A +         
Sbjct: 301 GLCNVLIQTHNYSDCLKTSKQALQKIPKNAEIRNKQGICEWKWGEVKKATLSFQDSSSWD 360

Query: 199 --------------VLAKEWSRAITFLNQKK---KNAKEWNRNRAILL-----IARSLEN 236
                         + +  +  A+  L + +   K  KE  R   IL      IA     
Sbjct: 361 PNFMEPKMNLAYVLIDSGRYDEALDVLKKAETHPKAKKEDIRKAKILAESQKFIASGDSF 420

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKV-NPHPE 294
             +G    ++ +  +++ +      A   A  ++  + ++ +KAE    + +++ N +P 
Sbjct: 421 LRQGKRKQAFDEYGKAMGVNPE-NPAVQNAYGRAYFAFSEYKKAEGSYLEAYRLDNTNPG 479

Query: 295 ----IANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               +A +Y     E+   K  +K+   L   +     S + + +IA +    D+A +  
Sbjct: 480 ALQGLARVYAK-TGESKKEKEFIKKLETLSATDP---FSAITLGRIAEDASKWDEAESIY 535

Query: 349 MLAMKIAP 356
           M   K  P
Sbjct: 536 MGLKKKFP 543



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 8/172 (4%)

Query: 95  IAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           IA+ +  L +                      V     +   A  +Y  A        ++
Sbjct: 414 IASGDSFLRQGKRKQAFDEYGKAMGVNPENPAVQNAYGRAYFAFSEYKKAEGSYLEAYRL 473

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   A+  L     + G+    + +  K   +S   P+    + +    A +W  A +
Sbjct: 474 DNTNPGALQGLARVYAKTGESKKEKEFIKKLETLSATDPFSAITLGRIAEDASKWDEAES 533

Query: 210 F---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
               L +K  N +  +     L   R++E   K +   +     +S K   +
Sbjct: 534 IYMGLKKKFPNNEAVDYRLGSLYYKRAVEENSKENYTKANEFIQKSKKYTKD 585


>gi|328865344|gb|EGG13730.1| DNAJ heat shock N-terminal domain-containing protein [Dictyostelium
           fasciculatum]
          Length = 539

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 87/264 (32%), Gaps = 30/264 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATK 179
             +L+ ++ +  + Y  A   +  +LQ          V  L        ++ SA ++   
Sbjct: 160 SNILKGKLLIENKHYGKAQNLMSQLLQDDQMNPELLYVRGLAL--YYSNNMASAAQHFKN 217

Query: 180 ALDISPDAPWVTEAV-----VQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAI 227
           +L   PD      A+     ++    A        ++ +A    ++  +   +++   A 
Sbjct: 218 SLVYDPDFSDSRVALKKLNNLEAKKKAGNEAFVAKDYEKAYELFSEALEIDPKFDTLNAQ 277

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +   R+           +  D  ++L+L  N + A    A+  + Q     A   LEK  
Sbjct: 278 IYNNRAATAVQLNKTREAIDDCTKALELDPNYVKAMTRRAQLYMKQEMYEDAVRDLEKA- 336

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                          L E+   +         + K + +    +  +A +   +D   A 
Sbjct: 337 -------------KGLDESDDIRRNLKEAKIALKKAARKDYYKILGVAKDCNEVDIKKAY 383

Query: 348 AMLAMKIAPRKEIFLLLAQIEQAN 371
             LA++  P K   +  A+   A 
Sbjct: 384 RKLALQYHPDKNSTIPEAEKAHAE 407


>gi|317492357|ref|ZP_07950786.1| TPR repeat-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919696|gb|EFV41026.1| TPR repeat-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 389

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 89/287 (31%), Gaps = 51/287 (17%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   TF    L      +  +A   Y+ A E    ++     +  
Sbjct: 83  GEVDRAIRIHQALMESASLTFDQRLLAVQQLGRDYMAAGLYDRAEEMFNQLVDEQDFKVS 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+  L                                     Y    +W +AI    +  
Sbjct: 143 ALQQLLI----------------------------------IYQATSDWQKAIDVAEKLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  K+  R   A      SL+     D+        ++     N    S+   +  I+++
Sbjct: 169 KQGKDQQRIEIAHFYCELSLQAMGSDDLERGMALLKKAASADKNCARVSVMLGRIYIAKD 228

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSE------NTVGKLKRALRLEEINKESVESL 328
           +  KA   L ++   +   ++ +    ++ +           +    R  E N  +  + 
Sbjct: 229 EPAKAVEALSQVLDQD--KDLVSEVLPMMHDCYQQLNQPEQWVAFLRRCVEENTGAA-AE 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQA 370
           ++++++  +   I+ A       ++  P     + L+    A+ E+ 
Sbjct: 286 LMLAEVLEQNEGIEAAQVYVGRQLQRHPTMRTFYRLMDYHLAEAEEG 332


>gi|206974986|ref|ZP_03235901.1| TPR domain protein [Bacillus cereus H3081.97]
 gi|229155184|ref|ZP_04283296.1| hypothetical protein bcere0010_13770 [Bacillus cereus ATCC 4342]
 gi|229195820|ref|ZP_04322579.1| hypothetical protein bcere0001_13830 [Bacillus cereus m1293]
 gi|206747005|gb|EDZ58397.1| TPR domain protein [Bacillus cereus H3081.97]
 gi|228587593|gb|EEK45652.1| hypothetical protein bcere0001_13830 [Bacillus cereus m1293]
 gi|228628311|gb|EEK85026.1| hypothetical protein bcere0010_13770 [Bacillus cereus ATCC 4342]
          Length = 434

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|289665019|ref|ZP_06486600.1| tetratricopeptide repeat family protein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 690

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 63/198 (31%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A +    +PD       +        + + A+  ++       E 
Sbjct: 6   LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPALALDSIDTALMLTPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      +  L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +    +   L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 182 EHFAFAERAFERVIELNP 199



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 85/291 (29%), Gaps = 14/291 (4%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  + S  +       +  ++LL     LA R  + A   L     +   +  A   
Sbjct: 46  GQPALALDSIDTALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVM 105

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217
               +   GDL+ A+R +  A  ++P+ P     + VV+      +  RA++ L +  + 
Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLALDGVVEMRRGQSD--RALSLLTRAAEQ 163

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +     A +L +       K     +       ++L    I      A+    Q +  
Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGIALRAFIAQLAQRQGRLD 219

Query: 278 KAEV----ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            A      +LE+     P          L +                      +L  +  
Sbjct: 220 DALAAMQGVLEQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLT 279

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
               +G++D A      A+  +       L  LA            I  W 
Sbjct: 280 AWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 7/163 (4%)

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291
           L+   +     +   A E      + + A    A +L  Q +   A   ++    + P  
Sbjct: 6   LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPALALDSIDTALMLTPED 65

Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
              H   A         +         R   ++     + V+ + +A+  G +D+A   +
Sbjct: 66  ADLHLLRAGALLATRDLSAAD--AALSRTTALDPNQFNAYVMQAHLAVARGDLDEAERLS 123

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A ++AP     L L  + +     +D+ L     A   +PD
Sbjct: 124 RTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPD 166


>gi|183221734|ref|YP_001839730.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|167780156|gb|ABZ98454.1| Putative protein with TPR repeats [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 372

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 5/158 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + ++ A    E    +     FA+Y L        D  +A  Y  K L+  PD   +   
Sbjct: 206 KDFDKAILYYERAKDLDPKNFFALYGLAESYRGKKDFKTAITYWEKILESDPDNKLIINR 265

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                     + +A+   N+   +  ++       L+ ++      GD+  +    +  L
Sbjct: 266 YADSLRGLGNYDKALECFNKILASGDDY-----FALLGKAAALRLIGDLEKAEEIYLGLL 320

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               N    ++  +       KK +A  +LE + K NP
Sbjct: 321 SKSPNDPRPALELSDLWDIMGKKPQAIKLLEDLAKKNP 358


>gi|23013697|ref|ZP_00053564.1| COG3914: Predicted O-linked N-acetylglucosamine transferase,
           SPINDLY family [Magnetospirillum magnetotacticum MS-1]
          Length = 659

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 11/178 (6%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSA 173
           +  + L   +    + +   A    + ++        A +          +   G  + A
Sbjct: 4   DPALLLQRAEALHNQGRVEEADRLYQDLITQAPQSPEAAKALTNRG--VIAQGGGRTDEA 61

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                +AL + P            +     W+ A     +  K + +     A   +  +
Sbjct: 62  LDLHGRALALVPGLAEGWCNRGDLFSDLGRWNEAQADFARAAKLSPQL--LPAWFNLGNA 119

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 G+  A+      +L+L  +  +     A+ L +  + ++A   +E   ++ P
Sbjct: 120 RLQL--GEAAAAEVCYRRALELAPHLPVIHAQLARCLDALGRAQEAADAMEAASRLAP 175



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 60/203 (29%), Gaps = 7/203 (3%)

Query: 86  KALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           KAL   G+++        A  +H           E         +     ++N A     
Sbjct: 43  KALTNRGVIAQGGGRTDEALDLHGRALALVPGLAEGWCN--RGDLFSDLGRWNEAQADFA 100

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
              ++      A ++L     ++G+  +A+    +AL+++P  P +   + +        
Sbjct: 101 RAAKLSPQLLPAWFNLGNARLQLGEAAAAEVCYRRALELAPHLPVIHAQLARCLDALGRA 160

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A   +    + A    R     L          G + A+      ++ L      A  
Sbjct: 161 QEAADAMEAASRLAPGDWRM----LTDLGALQQQAGRITAAKESLRSAISLNPAHASAHY 216

Query: 265 CAAKSLISQNKKRKAEVILEKIW 287
                   + +  +A    +  W
Sbjct: 217 NLGNVFYGEGRATEACACWQAAW 239


>gi|332974869|gb|EGK11783.1| tetratricopeptide (TPR) domain protein [Kingella kingae ATCC 23330]
          Length = 391

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 106/353 (30%), Gaps = 58/353 (16%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----RE 154
           N   A +  S V+Q     +E  + L   ++     + + A    + +L  P T    RE
Sbjct: 57  NKTAAARYLSEVAQMQNNAHE--LNLSLGKLYRQHGKNDKAIALHKALLDSPDTVNEKRE 114

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLN 212
             +Y L  +    G ++ A++     L +     A    E ++  Y   ++W +AI    
Sbjct: 115 RVLYELGLDYKSAGLVDRAEQTF---LGLQSSNMAKQANEWLLNIYQQDRDWEKAIATAQ 171

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
               + + +    A             G++ A+      +L        A+I        
Sbjct: 172 LLAHDEQTYQFEIAQFYCEIGQNQFFHGNLNAAQEAMQAALLANPKCTRANILLGDIHQK 231

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKL--------------KRAL 315
           +   R A      I K N        Y  ++ E   +    L              K   
Sbjct: 232 EGNYRSAIDAYTAIEKQN------YAYLTMVGEKLYDAYEALGEAQAGLDVLIGYAKAFP 285

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQA 370
           +++ +N    +SL++  +          A+  A+  ++  P    ++ L    +  +   
Sbjct: 286 QIDFLNVIYDKSLLLHGEA--------VANETALDLIRSKPDLNGMYRLIGLSMPDLNSQ 337

Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV-----WLPLSPISKTLCYF 418
              + D +       L       W+    +         W    P       F
Sbjct: 338 WKADADMMRGVLNRQLQ----KTWMYRCQHCHFKSQVYFWH--CPACNKWETF 384


>gi|16550822|dbj|BAB71057.1| unnamed protein product [Homo sapiens]
          Length = 645

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 253 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 309

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 310 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 369

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 370 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 429

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 430 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 485

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 486 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 544

Query: 389 MPDP 392
             DP
Sbjct: 545 PKDP 548



 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 386 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 443

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 444 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 501

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 502 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 555

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 556 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 591

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 592 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 633


>gi|17547074|ref|NP_520476.1| protein porphyrin biosynthesis [Ralstonia solanacearum GMI1000]
 gi|17429375|emb|CAD16062.1| putative protein porphyrin biosynthesis [Ralstonia solanacearum
           GMI1000]
          Length = 397

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/400 (13%), Positives = 118/400 (29%), Gaps = 18/400 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S   +L+ L        LL  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLASLVLVFVVLHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    +   AL   + S+ A     A ++              
Sbjct: 61  LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQA--WEPQRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E     A             +  ++  L  ++    D + A     
Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236
           +               ++ +   K W+  +      +K     +   A L  +   +L  
Sbjct: 176 QLQAQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHSVLAARLKQMACETLLQ 235

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             + D  A      E       S   +  AA       +  +A+ I+E   + +    + 
Sbjct: 236 ERRHDTDALNDFWRELTTEERRSPRIASQAALYFAQLGRTDEAKRIVEDALRAHWDGRLI 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +    +  +++A +    +    +    +  +  +     +A +    A+K A
Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLAQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355

Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                   R    L LAQ+ +      +   ++ QSAL A
Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRQEEAQRHFRQSALLA 395


>gi|115376717|ref|ZP_01463944.1| adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1]
 gi|115366266|gb|EAU65274.1| adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1]
          Length = 475

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 87/239 (36%), Gaps = 9/239 (3%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E  V   + Q       Y     K +  L+  A    A Y+L   + R G  + A+ +  
Sbjct: 61  EDAVKAFDAQKKAKAFDYPSLDRKFKAALEADANIAEADYNLGVIAERQGKKDEAKTWYQ 120

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            AL   P     +E +        +   A+       K   +  ++RA L    +     
Sbjct: 121 SALKKKPSLRQASENLAVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL----AEIYRQ 176

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297
            GD   +   +  +L     S  A     +S + + +   A+++  +  K++ + PE+ +
Sbjct: 177 TGDHDRAMEFSRAALMREPQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHH 236

Query: 298 IYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
               +     +    +L+   R  E  ++ V S ++++++ALE      A       ++
Sbjct: 237 TIGLILQQEGDADGARLQ-FKRALETREDYVPSHIVLAQLALEAEDYPGAEEHLRRILQ 294



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 79/232 (34%), Gaps = 10/232 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            +M+    +I  A  ++  V +++    +    L   +I      ++ A E     L   
Sbjct: 137 AVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL--AEIYRQTGDHDRAMEFSRAALMRE 194

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+  +         L  A+  A +AL +  + P +   +        +   A   
Sbjct: 195 PQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHHTIGLILQQEGDADGARLQ 254

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  +  +++  +  +L    +LE  D           +++         A +    + 
Sbjct: 255 FKRALETREDYVPSHIVLA-QLALEAEDYPGAEEHLRRILQAGAKS---AAAHVNLGIAY 310

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEI 320
             Q +  KA    +   K++  P++A IY +  ++        +RA+ L + 
Sbjct: 311 KGQGQYDKAMQEYDAAEKLD--PKVAAIYLNRAVILHQAKDAPERAVELYKK 360


>gi|284052765|ref|ZP_06382975.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira platensis str.
           Paraca]
 gi|291565858|dbj|BAI88130.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 370

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 120/352 (34%), Gaps = 22/352 (6%)

Query: 36  LYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSI 95
           +++T+  ++ ++L        ++ AV++     P +L     + N ++    L  G   +
Sbjct: 1   MFKTTKLLVSNVLLAIAATVFVVPAVAQ----PPQILAQATSQANINELNDLLQKGRDLV 56

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            + N+  A  ++    Q  +   +    L  VQ       +  A +     + +      
Sbjct: 57  NSGNMDEALNVYLQAVQLESSDAKIYSALAYVQA--LRGDFEAAAKFYRDAITLDPQNAD 114

Query: 156 AVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             Y L Y  +       +AQ Y  +A  +  D       +       +++  AI      
Sbjct: 115 FYYGLGYTLARLQDYPAAAQAY-RRATQLQRDNINAHLGLAASLFRQQDYRGAIEAYQTA 173

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
              A E N   A   +  +     +G+   S     ++++L  N     +    + + Q 
Sbjct: 174 L--ALEPNNWEANASLGMA--WLRQGNASQSLQFLQQAMELAPNQPNIYLKLGIAYLEQG 229

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            +  A    ++  +++P       +I  I+   L EN  G ++   +   +  + V + +
Sbjct: 230 DRTAALDAFQEAARLSPFNGEIQFQIGEIFR--LQENFEGAMQAYQQALAMEPDLVAANM 287

Query: 330 IVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
            + +I L +     A     +A       P    +L LA  E+         
Sbjct: 288 AIGEIQLRLRDYIGAIVSFRRAADRFADQPSVHYYLGLALKERGGREPQAIA 339


>gi|196039128|ref|ZP_03106435.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99]
 gi|301053156|ref|YP_003791367.1| TPR-repeat-containing protein [Bacillus anthracis CI]
 gi|196030273|gb|EDX68873.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99]
 gi|300375325|gb|ADK04229.1| TPR-repeat-containing protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 420

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|90021079|ref|YP_526906.1| hypothetical protein Sde_1432 [Saccharophagus degradans 2-40]
 gi|89950679|gb|ABD80694.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
          Length = 259

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 4/159 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L +     A       L+       A   L       G++ +A++   KAL    D  
Sbjct: 46  TYLQKGDRENALRAFSKALETDKKSAEANQGLALVHQLNGEVEAAEKSFQKALKGRADFS 105

Query: 189 WVTEAVV--QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                +   +     + +  A        ++    +R  A+  +   L +   GD + + 
Sbjct: 106 MAGVELSYGRFLFEQERYKEAKEHFEMASQDLTFQSRANALYFVG--LTSQKIGDEVRAL 163

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                +L L      A+I  A+   ++     A+  L++
Sbjct: 164 AAFQHALNLNPRLAPAAIELAEYSFAERDYASAKKYLDQ 202



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 4/119 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---RE 154
             +  A K      +     +   V L   +    + +Y  A E  E M     T   R 
Sbjct: 85  GEVEAAEKSFQKALKGRADFSMAGVELSYGRFLFEQERYKEAKEHFE-MASQDLTFQSRA 143

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
            A+Y +   S +IGD   A      AL+++P        + +     ++++ A  +L+Q
Sbjct: 144 NALYFVGLTSQKIGDEVRALAAFQHALNLNPRLAPAAIELAEYSFAERDYASAKKYLDQ 202



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 67/200 (33%), Gaps = 23/200 (11%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+   +   A+   ++      E ++  A      +L +   G++ A+     ++LK   
Sbjct: 47  YLQKGDRENALRAFSKAL----ETDKKSAEANQGLALVHQLNGEVEAAEKSFQKALKGRA 102

Query: 258 NSIMASI--CAAKSLISQNKKRKAEVILEKIWKVNPHPEI-------ANIYTHLLS---E 305
           +  MA +     + L  Q + ++A+   E   +     ++       A  +  L S    
Sbjct: 103 DFSMAGVELSYGRFLFEQERYKEAKEHFEMASQ-----DLTFQSRANALYFVGLTSQKIG 157

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLL 363
           + V  L        +N     + + +++ +        A       ++   R+      L
Sbjct: 158 DEVRALAAFQHALNLNPRLAPAAIELAEYSFAERDYASAKKYLDQFVRSNNRQTPRSLWL 217

Query: 364 LAQIEQANSHNTDKILYWTQ 383
             +IE+   +   +  Y   
Sbjct: 218 GIRIERIFGNKDKEASYALA 237


>gi|308275079|emb|CBX31678.1| hypothetical protein N47_E51900 [uncultured Desulfobacterium sp.]
          Length = 801

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 65/190 (34%), Gaps = 9/190 (4%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           AE  Y  A +  E  L +      A+  +         L+ A     K + ISP      
Sbjct: 524 AENNYKEAVKYFEKSLSVNPDYFPAMNMIIKIKLNEKKLDEALARCFKQVGISPKNT-AF 582

Query: 192 EAVV-QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             ++ Q YVL K+   A            +       +L+A +     +G +  +     
Sbjct: 583 RLMLGQLYVLKKDPEAARNSFETALTINPDSRE----VLMAYANFEMSQGAIDQAILKYE 638

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENT 307
           +      ++   +I  A     +   +K+  I E++ K  P   +A+    Y +   E T
Sbjct: 639 KLRSNNPDNPGYAILTAGLYEKKGDIKKSRQIYEEVLKKYPGHILASNNLAYYYAEYEPT 698

Query: 308 VGKLKRALRL 317
              L +A  L
Sbjct: 699 KENLDKAESL 708



 Score = 44.2 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 25/261 (9%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
              +  IA +  + +L    T   A + L     R   ++ A+      L  +PD     
Sbjct: 422 LNGEPAIAEDIYKKLLVQNDTLRSARFGLANIYQRTNKIDMAKEQMQIILKKNPDDIEAL 481

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHD 248
             +    +L+K   +AI++  +  K+       N    ++  A       + +   +   
Sbjct: 482 VMMGDLEILSKNQRKAISYYEEVIKHDPGSVTANYKMGVMHAA-------ENNYKEAVKY 534

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILE--------KIWKVNPHPEIANIY 299
             +SL +  +   A     K  +++ K  +A     +          +++     +  +Y
Sbjct: 535 FEKSLSVNPDYFPAMNMIIKIKLNEKKLDEALARCFKQVGISPKNTAFRLM----LGQLY 590

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L  +    +         IN +S E L+  +   +  G+IDQA  K        P   
Sbjct: 591 V-LKKDPEAAR-NSFETALTINPDSREVLMAYANFEMSQGAIDQAILKYEKLRSNNPDNP 648

Query: 360 IFLLLAQIEQANSHNTDKILY 380
            + +L         +  K   
Sbjct: 649 GYAILTAGLYEKKGDIKKSRQ 669



 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 56/147 (38%), Gaps = 8/147 (5%)

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           +  D I +  +   +L++      A        I   + RKA     K  +++  PE+ +
Sbjct: 45  ENSDYIKAGLEFKNALQIDPKFAQAYYMLGMIEIKATEFRKAFGDFSKAVELD--PELLD 102

Query: 298 IYTHLLSENTVGKLK-----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
               L +   + KLK     +   +     +  ++L++ + + +  G + ++       +
Sbjct: 103 AQIQLGNIYLLAKLKDKANEKLELVISKKPDYPDALLLKAGLLMADGKLTESETVLKQII 162

Query: 353 KIAP-RKEIFLLLAQIEQANSHNTDKI 378
              P ++E + +LA I++         
Sbjct: 163 NSNPKKEEAYFMLAAIKRIQKDIAGVA 189



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+M  A +N   A K        +  +   +  ++++++   +    +A    + +   P
Sbjct: 519 GVMHAAENNYKEAVKYFEKSLSVNPDYFPAMNMIIKIKLNEKKLDEALAR-CFKQVGISP 577

Query: 151 A-TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             T    +   LY       D  +A+     AL I+PD+  V  A     +      +AI
Sbjct: 578 KNTAFRLMLGQLYVLKK---DPEAARNSFETALTINPDSREVLMAYANFEMSQGAIDQAI 634

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----SI 264
               +K ++    N   AIL          KGD+  S     E LK     I+A    + 
Sbjct: 635 -LKYEKLRSNNPDNPGYAILTAGL---YEKKGDIKKSRQIYEEVLKKYPGHILASNNLAY 690

Query: 265 CAAKSLISQNKKRKAEVIL 283
             A+   ++    KAE ++
Sbjct: 691 YYAEYEPTKENLDKAESLI 709


>gi|329850849|ref|ZP_08265694.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
 gi|328841164|gb|EGF90735.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
          Length = 612

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 70/264 (26%), Gaps = 13/264 (4%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             N   A K           +   LV   L    +        +     ++      ++ 
Sbjct: 12  TGNPVFAPKPSVTAIALGAENAVPLVGAGLVDPASQILGDSASSESLKRLISSTDRIKQI 71

Query: 156 AVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               L  E+    + GD       A KAL +   +      +      A +   AIT   
Sbjct: 72  DTLILLKEALVMFKRGDWIRGGELALKALHVDEKSAQAWHVLAIAREKAGDLKTAITCFE 131

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              + + E     A +                +    +  L    N   A    A  L  
Sbjct: 132 TALRISPE----DAYIANDLGRLAFRLSLNDLAQKFFLHFLASFPNHPEAMNNLASVLRE 187

Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIY---THLLSENTVGKLKRALRLEEINKESVESL 328
           +N    A  +L+     +P  P++ N      +   +     +     L + + +     
Sbjct: 188 KNDLDGAIEVLQTAIAAHPEDPQLWNAIGTVVNARGDTETAGVFYQEAL-KFDPDHCHGN 246

Query: 329 VIVSKIALEMGSIDQAHAKAMLAM 352
                +   +G  D+A      A+
Sbjct: 247 YNYGNVLTSLGRFDEARRYFDHAL 270


>gi|119617004|gb|EAW96598.1| hCG2009560, isoform CRA_a [Homo sapiens]
          Length = 618

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 226 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 282

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 283 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 342

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 343 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 402

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 403 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 458

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 459 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 517

Query: 389 MPDP 392
             DP
Sbjct: 518 PKDP 521



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 359 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 416

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 417 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 474

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 475 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 528

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 529 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 564

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 565 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 606


>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1737

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 33/282 (11%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
            G  ++AA  +  A  ++    +       + + L  +L    A    ++  A    +  
Sbjct: 18  QGQQAVAAGQLEKAVTLYKKTIELNPNLALYQQNLGDVL----AKI-GKWEEAATVYQKA 72

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           +++  T   + Y+L     + G L  A    ++A+ I+P+   +  ++    V       
Sbjct: 73  IELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYISLGSALVQKGLLYE 132

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           AI    +      E     +I      +    +G +        +++++           
Sbjct: 133 AIANFQKAISLEPES----SIAHQNLGVALEKQGQIEEGIICYRKAIEIDPGFWEGYQKL 188

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR----------ALR 316
             +L  Q +  +A  I  K  ++   P  A +Y H     T+ KL+R          A++
Sbjct: 189 GIALTKQGEFHQAAKIYLKACQII--PNSATVYHHY--GETLAKLRRWDEAIAAYRQAIK 244

Query: 317 LEEINK--ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           LE  +         V+  K        ++A +    A+KI P
Sbjct: 245 LEANSPVIYHQFGYVLTQK-----QQWEEAISAYRQAIKIKP 281



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 29/236 (12%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYS----LYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           +++ A       +++ A     +Y     +  +  +      A     +A+ I P++P V
Sbjct: 231 RWDEAIAAYRQAIKLEANSPV-IYHQFGYVLTQKQQ---WEEAISAYRQAIKIKPNSPDV 286

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMIASYHDA 249
              +       + W  A+    +K    +  N          +L    +  + I +Y  A
Sbjct: 287 YHHLGDALTQQQNWEEAVGA-YRKVTELQP-NSPEVYHYFGYALSQLQQWEEAIVAYRKA 344

Query: 250 IESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
            E      +     +      +LI   +   A V L +  ++N  P +A  Y  L     
Sbjct: 345 SELQPNSPD-----VHHQLGHALIELKQNDWAVVELRQAVELN--PNLAEAYRDL--GRA 395

Query: 308 VGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  +K+            E+N    E    + K        D+A      A+K+ P
Sbjct: 396 LSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQWDEAIVNYGHALKLNP 451



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 19/215 (8%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A   L      I   + A      A++++P+   V   + + Y   K+W  AI       
Sbjct: 388 AYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQWDEAIVNYGHAL 447

Query: 216 K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLIS 272
           K N K    +  + L     +  D  D I SY  AIE          A I      +L  
Sbjct: 448 KLNPKLPEVHHNLALTLVQQQKFD--DAIVSYGQAIE-----LGINTAEIHHQLGHTLSK 500

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV------GKLKRALRLEEINKESVE 326
             +  +A +   +  ++N  P  A +Y H+L E+          +    +  +++ +S +
Sbjct: 501 LKRWDEAVISYRQAAEIN--PNSAAVY-HVLGESLAQLEKWDEAVAAYTKASQLHPKSAD 557

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               + ++   +G  D+A      A+++ P    F
Sbjct: 558 VRYHIGEVMSRLGRWDEAVEAYGKAVELRPSSAKF 592



 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +  D   A     +A++++P+       + +     K+W  AI       +        
Sbjct: 365 LKQNDW--AVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEV 422

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-----KRKA 279
              L  A + +         +  +   +LKL           A +L+ Q K         
Sbjct: 423 YGYLGKAYASQK----QWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYG 478

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           + I   I     H ++ +  + L   +    +    +  EIN  S     ++ +   ++ 
Sbjct: 479 QAIELGINTAEIHHQLGHTLSKLKRWDEA--VISYRQAAEINPNSAAVYHVLGESLAQLE 536

Query: 340 SIDQAHAKAMLAMKIAP 356
             D+A A    A ++ P
Sbjct: 537 KWDEAVAAYTKASQLHP 553


>gi|49477257|ref|YP_035735.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49328813|gb|AAT59459.1| TPR-repeat-containing protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 420

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|326511269|dbj|BAJ87648.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 842

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 11/193 (5%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257
              + A        + A+  N   A +L        +    +G ++ +     E+  LC 
Sbjct: 316 GRHAEAKEEFLLALEAAEAGNSQSADILPQIHVNLGIAMEAEGMVLGACEHYREAAILCP 375

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           +   A      +L    + R AE  LE+   + P     H ++ +   H + ++    ++
Sbjct: 376 SHARALKLLGSALFGVGEYRAAEKALEEAIFLKPDYADAHCDLGSA-LHAVGDDDRA-VE 433

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              +  ++    V++L  +  + ++ G   +A       + I P      L   +     
Sbjct: 434 EFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQ 493

Query: 373 HNTDKILYWTQSA 385
             +++     + A
Sbjct: 494 GESEEAKKALKEA 506


>gi|326510261|dbj|BAJ87347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 842

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 11/193 (5%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257
              + A        + A+  N   A +L        +    +G ++ +     E+  LC 
Sbjct: 316 GRHAEAKEEFLLALEAAEAGNSQSADILPQIHVNLGIAMEAEGMVLGACEHYREAAILCP 375

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           +   A      +L    + R AE  LE+   + P     H ++ +   H + ++    ++
Sbjct: 376 SHARALKLLGSALFGVGEYRAAEKALEEAIFLKPDYADAHCDLGSA-LHAVGDDDRA-VE 433

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              +  ++    V++L  +  + ++ G   +A       + I P      L   +     
Sbjct: 434 EFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQ 493

Query: 373 HNTDKILYWTQSA 385
             +++     + A
Sbjct: 494 GESEEAKKALKEA 506


>gi|316973197|gb|EFV56817.1| putative tetratricopeptide repeat-containing domain protein
           [Trichinella spiralis]
          Length = 556

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 43/137 (31%), Gaps = 8/137 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E    G   +A     K LD+        EA+V  ++     + A + L+       
Sbjct: 325 LMSE---RGSTETAVSLLRKTLDMDRTRFEAYEALVNMFLKNGNLNEAESTLHNCMNALG 381

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 A +L   +    +             +LKL  N + A    A   I       A
Sbjct: 382 ----GTAPVLALCAKVLLNNNHEQQGMQTLNHALKLAPNYLPAICTLADYYIKNYDYELA 437

Query: 280 EVILEKIWKVNP-HPEI 295
           E  L     V P HPE+
Sbjct: 438 EAKLTTAMSVYPSHPEL 454


>gi|115380381|ref|ZP_01467379.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310822651|ref|YP_003955009.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115362616|gb|EAU61853.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309395723|gb|ADO73182.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 622

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 5/184 (2%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           AR              E   YL+  Q  L  R  + A + +E +             L  
Sbjct: 138 ARARLHLRRAMALRPQEPEAYLILAQSYLETRDPDEAVKVVEALAAALPGESSGYRRLGL 197

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                GD + A+R   +A +  P        + + Y      S A   L++  +   + +
Sbjct: 198 ALAERGDRSRAERLLARATERDPGDVEAWVTLARLYEAGGRLSHAEEALSRSLER--DAD 255

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               +L   R            +Y D + SL         ++  A + ++  +   A  +
Sbjct: 256 NRDVLLSAGRLALKLGSATRARAYFDRLLSLSNDPEL---TVKVAFAFLASRETAAAAEV 312

Query: 283 LEKI 286
           L+  
Sbjct: 313 LDMA 316



 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 9/171 (5%)

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            LL     E A  G++  +  +   +++       A +   ++L+   +  +A + L + 
Sbjct: 88  YLLTQLGEEYARLGELAKAERELRRAVERSPQYYPAHVMLGRTLLEGKRYARARLHLRRA 147

Query: 287 WKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             + P  PE    +A  Y      +    +K    L             +     E G  
Sbjct: 148 MALRPQEPEAYLILAQSYLETR--DPDEAVKVVEALAAALPGESSGYRRLGLALAERGDR 205

Query: 342 DQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +A      A +  P   E ++ LA++ +A              +L    D
Sbjct: 206 SRAERLLARATERDPGDVEAWVTLARLYEA-GGRLSHAEEALSRSLERDAD 255



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 76/241 (31%), Gaps = 9/241 (3%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            N YL+  L  + A    +   A  +L   ++       A   L            A+ +
Sbjct: 85  GNPYLLTQLGEEYARL-GELAKAERELRRAVERSPQYYPAHVMLGRTLLEGKRYARARLH 143

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A+ + P  P     + Q Y+  ++   A+  +          +     L +A +   
Sbjct: 144 LRRAMALRPQEPEAYLILAQSYLETRDPDEAVKVVEALAAALPGESSGYRRLGLALA--- 200

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE- 294
            ++GD   +      + +     + A +  A+   +  +   AE  L +  + +  + + 
Sbjct: 201 -ERGDRSRAERLLARATERDPGDVEAWVTLARLYEAGGRLSHAEEALSRSLERDADNRDV 259

Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            ++     L   +         RL  +     E  V V+   L       A     +A +
Sbjct: 260 LLSAGRLALKLGSATRARAYFDRLLSL-SNDPELTVKVAFAFLASRETAAAAEVLDMARR 318

Query: 354 I 354
            
Sbjct: 319 S 319



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 93/291 (31%), Gaps = 45/291 (15%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
           ++  S++         + L+ ++     ++  A ++L + L       + +  L  E  R
Sbjct: 40  NARESEERYSSPASYAHFLQSRLMHHTGEHRAAVDELRLALATNEGNPYLLTQLGEEYAR 99

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +G+L  A+R   +A++ SP                 ++  A   L +     K + R R 
Sbjct: 100 LGELAKAERELRRAVERSP-----------------QYYPAHVMLGRTLLEGKRYARARL 142

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L                       ++ L      A +  A+S +      +A  ++E +
Sbjct: 143 HL---------------------RRAMALRPQEPEAYLILAQSYLETRDPDEAVKVVEAL 181

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
               P     +  +          +   +L    R  E +   VE+ V ++++    G +
Sbjct: 182 AAALPGESSGYRRLGLALAERGDRSRAERL--LARATERDPGDVEAWVTLARLYEAGGRL 239

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
             A      +++        LL A        +  +   +    L    DP
Sbjct: 240 SHAEEALSRSLERDADNRDVLLSAGRLALKLGSATRARAYFDRLLSLSNDP 290


>gi|328949628|ref|YP_004366963.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328449952|gb|AEB10853.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 504

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 17/176 (9%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q    E     A    E+ L        A+  L       G    A+ Y  +   ++P  
Sbjct: 30  QALYQEGDLESAAATCELALTADERFVPALKLLARIHLDRGQPKEAEAYLERLTALTPTD 89

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR------SLENADKGD 241
           P V   V +  +     + A+T L  +++    W + +A+  + R      +L+ A +  
Sbjct: 90  PEVGVLVARHRLAVGRPAEALTLLADRREAEALWLKGQALAALGRYPEALEALQAAWEAG 149

Query: 242 MIASYHDAI----------ESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKI 286
            + +  DA           E+L +   +    ++   + L++  +   A  +LE  
Sbjct: 150 EVRARLDAARVYERLGRPTEALAVLPEAGPEVAVLRGRLLLAAGELDAAARVLEDT 205


>gi|326666512|ref|XP_001922025.3| PREDICTED: transmembrane and TPR repeat-containing protein 1 [Danio
           rerio]
          Length = 872

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 115/369 (31%), Gaps = 49/369 (13%)

Query: 27  DVSITWGNRLYRTSPFVILSILYFFLF----AWILLFAVSR-FFLSCPAMLFHMLHKRN- 80
            V   WG      S  V+L +  +        W+   A+ R    + P       +  N 
Sbjct: 429 SVVSRWGAAALTVSMLVVLLLFSWKTVQQNEIWLSREALFRSGIQTLPHNAKVHYNYANF 488

Query: 81  -YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYN 137
             DKG                  A   +    + +  H   L  L  L  Q         
Sbjct: 489 LKDKGRN--------------QEAIYHYKTALRLYPRHASALNNLGTLTHQA-------E 527

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A       L I      A+++L       G    A+R   +++   P       ++   
Sbjct: 528 EAEVYYRRALDINPQHNRALFNLGNLLKSQGKEEEAERMLKESIRFGPHFADAYSSLASL 587

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y        A     +  +N  E +     L     +   D G    +     E+++L  
Sbjct: 588 YADQGHSKEANEIYTKGIENCPESSD----LHNNYGVFLVDTGRGDRAAFHYQEAVRLKP 643

Query: 258 NSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
              +A +   + L S N         ++A  ++ K+  + P   +  +Y +    E  + 
Sbjct: 644 AHYVAMVNLGRLLRSSNDNKEAELWYKRALQVVRKVDILTP---LGALYYNTGRYEEALE 700

Query: 310 KLKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
             + A  L     +S +  + +++ +A+   S +       +  K +   E + LL+ I 
Sbjct: 701 VYREASTL---QPDSTDIWLALAQVLAMAGRSTEAEKMTLGIISKTSNCIECYRLLSAIY 757

Query: 369 QANSHNTDK 377
               ++T+ 
Sbjct: 758 SKQGNHTEA 766


>gi|228932907|ref|ZP_04095772.1| hypothetical protein bthur0009_13780 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826710|gb|EEM72479.1| hypothetical protein bthur0009_13780 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 434

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|66768248|ref|YP_243010.1| tetratricopeptide repeat protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991384|ref|YP_001903394.1| tetratricopeptide repeat protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|66573580|gb|AAY48990.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733144|emb|CAP51342.1| putative peptide glycosyltransferase [Xanthomonas campestris pv.
           campestris]
          Length = 392

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 90/303 (29%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI    + ++   +   +  +      +      G    +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGVGKPDEALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +    +     A    E+  + +P       P +   Y  +
Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                   +  A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L  +  A   +    L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|33152754|ref|NP_874107.1| HemY protein [Haemophilus ducreyi 35000HP]
 gi|33148978|gb|AAP96496.1| HemY protein [Haemophilus ducreyi 35000HP]
          Length = 413

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 45/142 (31%), Gaps = 2/142 (1%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++    ++   + +   ++     V I   +++   S  +++      +    ++  
Sbjct: 1   MFRVLFLMLLLLAGLVAGPYLAGSQGYVRIETDSKVIEMSLVMLVVFFIMAMSMVYIIEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F       +     R   +  +    GLM     +   A K+ S  ++     +  
Sbjct: 61  TIIRFFRLSKGSYSWFFHRKQKQAQQETLEGLMKFREGDYSKAEKLFSKNAKHA--GSPI 118

Query: 121 LVYLLEVQIALAERQYNIAHEK 142
           L  +   + A        A++ 
Sbjct: 119 LNLIKAAEAAQQRGDEFNANKY 140



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 184 SPDAPWVTEAVVQQYV--LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                   +  ++  +     ++S+A    ++  K+A        + LI  +     +GD
Sbjct: 78  HRKQKQAQQETLEGLMKFREGDYSKAEKLFSKNAKHAGSP----ILNLIKAAEAAQQRGD 133

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              +    IE+ +L  NS++  +  AK L+ QNK   A   ++ + ++ P
Sbjct: 134 EFNANKYLIEASQLSPNSVVVELTRAKILVQQNKLPAARSAIDSLIELAP 183


>gi|310822887|ref|YP_003955245.1| adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1]
 gi|309395959|gb|ADO73418.1| Adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1]
          Length = 474

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 87/239 (36%), Gaps = 9/239 (3%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E  V   + Q       Y     K +  L+  A    A Y+L   + R G  + A+ +  
Sbjct: 60  EDAVKAFDAQKKAKAFDYPSLDRKFKAALEADANIAEADYNLGVIAERQGKKDEAKTWYQ 119

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            AL   P     +E +        +   A+       K   +  ++RA L    +     
Sbjct: 120 SALKKKPSLRQASENLAVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL----AEIYRQ 175

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297
            GD   +   +  +L     S  A     +S + + +   A+++  +  K++ + PE+ +
Sbjct: 176 TGDHDRAMEFSRAALMREPQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHH 235

Query: 298 IYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
               +     +    +L+   R  E  ++ V S ++++++ALE      A       ++
Sbjct: 236 TIGLILQQEGDADGARLQ-FKRALETREDYVPSHIVLAQLALEAEDYPGAEEHLRRILQ 293



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 79/232 (34%), Gaps = 10/232 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            +M+    +I  A  ++  V +++    +    L   +I      ++ A E     L   
Sbjct: 136 AVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL--AEIYRQTGDHDRAMEFSRAALMRE 193

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+  +         L  A+  A +AL +  + P +   +        +   A   
Sbjct: 194 PQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHHTIGLILQQEGDADGARLQ 253

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  +  +++  +  +L    +LE  D           +++         A +    + 
Sbjct: 254 FKRALETREDYVPSHIVLA-QLALEAEDYPGAEEHLRRILQAGAKS---AAAHVNLGIAY 309

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEI 320
             Q +  KA    +   K++  P++A IY +  ++        +RA+ L + 
Sbjct: 310 KGQGQYDKAMQEYDAAEKLD--PKVAAIYLNRAVILHQAKDAPERAVELYKK 359


>gi|229096110|ref|ZP_04227083.1| hypothetical protein bcere0020_13580 [Bacillus cereus Rock3-29]
 gi|228687070|gb|EEL40975.1| hypothetical protein bcere0020_13580 [Bacillus cereus Rock3-29]
          Length = 434

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 33/268 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKELMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + ++   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELAVPFYVELASIAAKLGKVAEAEEVL 308

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340
           +K                L   +    LK A  L+   K   E L+ V + A++ G    
Sbjct: 309 QKA-------------LELDPGHLGAILKYAYILKGQEK--YEELITVVERAIDSGEPDT 353

Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362
               D A AK  L M        +  + 
Sbjct: 354 QLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|227113872|ref|ZP_03827528.1| cellulose synthase subunit BcsC [Pectobacterium carotovorum subsp.
            brasiliensis PBR1692]
          Length = 1526

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 115/327 (35%), Gaps = 44/327 (13%)

Query: 91   GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYLVY-------LLEVQIALAERQYNI 138
            GL+ + A +   A     + + + V++ ++   E L+        + E   AL      +
Sbjct: 681  GLVYLRAGDRVKALAQFQKALQADVNRLNSGKWEGLIKSTQYWTTIAEGDNALKANNLPL 740

Query: 139  AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
            A +K +   Q+  T  +A+  L   +    +  +AQ    +AL + P        +V  Y
Sbjct: 741  ARQKYQQARQMDNTNPYALIGLGDVAVASQNDTAAQPLYQQALHLEPGNDNALRGLVGIY 800

Query: 199  VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI------ARSLENADKGDMIASYHDAIES 252
                   +A+T+LN     +++      +  +       ++ + A++     +     ++
Sbjct: 801  QRQSP-EKALTYLNS-LSRSQQNTMRDTLTALQLNILKQQADQLAEQQQWTQAEEKYRQA 858

Query: 253  LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-- 310
             +   N I  +   A++L    + ++A+ ++++   V P  +    Y + L  ++  +  
Sbjct: 859  NQQDPNDIWFAYRYAQTLRQLGQMQQADSVVQRATAVPPA-DAQKNYVYSLYLSSTNRDE 917

Query: 311  --LKRALRLEEINKESV----------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              L     L                  ++ +  ++   + G    A A            
Sbjct: 918  QALAHLNTLSAAQWSDDMRDLSQRLTIQTTLAKAEAMRDAGDESAAIAFLRQQPANT--- 974

Query: 359  EIFLLLAQ--IEQAN----SHNTDKIL 379
             I LLLA   + +        +  +I 
Sbjct: 975  RIDLLLADWALARGEYATALADYQRIR 1001



 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 37/245 (15%)

Query: 144 EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           + ML  P   TR   + SL  +    G  ++       AL  +P+ P +  AV   Y+  
Sbjct: 265 QKMLADPTYQTR---LRSLA-QGESRGGNSAMLNELNNALAATPNTPELIGAVALVYLRE 320

Query: 202 KEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
            +  +A+    +  +   +     R   ++   +      KGD      +A+++  L  N
Sbjct: 321 GDRKKALEQFQKALQVDMSRLHSGRWEGLIQNTQDWTTIAKGD------NALKANNLALN 374

Query: 259 SIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR- 313
            +       + A ++  ++                +P   +      L   +    + R 
Sbjct: 375 WLRLLPLLLVTAPQAYSAE--------------TTSPEQFLMEQ-VRLGEASNKDDIVRQ 419

Query: 314 -ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              RLE IN ++ E +    ++AL  G   QA  +      +AP   ++   A+I  A +
Sbjct: 420 SLHRLELINPDNPEVIAARLRLALRQGDQAQARQQLDKLKAVAPDSALYR-QAEITLALT 478

Query: 373 HNTDK 377
             T +
Sbjct: 479 QETAR 483



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 6/134 (4%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L + +        + A   L                L   +   G+  +A     +  
Sbjct: 946  TTLAKAEAMRDAGDESAAIAFLRQQPANTRIDLL----LADWALARGEYATALADYQRIR 1001

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240
               P  P      +  ++       A   LNQ   + A   N  R +    +++ N  K 
Sbjct: 1002 TREPQNPDAQLGEIDAFIAQGRQDDARQRLNQLPAQAADTLNAQRHVANAWQAVGNPQKS 1061

Query: 241  DMIASYHDAIESLK 254
                     I++ K
Sbjct: 1062 -TALFRQLKIDAQK 1074


>gi|197335049|ref|YP_002156578.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11]
 gi|197316539|gb|ACH65986.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11]
          Length = 389

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 94/294 (31%), Gaps = 51/294 (17%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A K+H  +  +   T     +      +  +     + A +  E +L+ P  R  
Sbjct: 83  GEVDRAIKIHQNLIARPNLTIDQRNIALQQLAKDYMVSGILDRAEKIFEQLLEEPDHR-- 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                                  +A  +          +V  +   +EW +AI F N   
Sbjct: 141 -----------------------EAALLQ---------LVAIHQQTREWEQAIQFANSLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +  ++  +   A      +++     +   +  +  ++L   +  + ASI  AK L+ ++
Sbjct: 169 RMGRKKLKLDIAHYYCELAMQELADENSNKAKQNLKKALSSDNQCVRASIMMAKLLMEED 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVES 327
             + A V LE +      +     P +A  Y  L  E   +  LK    + +    S E 
Sbjct: 229 NYKGALVHLESVLDQDIDFVSEALPLLAECYEKLDREGALLQFLK--EAISKGAGASAE- 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILY 380
            +++S +  +   +  A       +   P     + L+      +     +   
Sbjct: 286 -LMLSNLIAKHEGVALAQGYMTKQLLKNPTMKGFYRLMGY--HTDEAEDGRAKA 336


>gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
           43184]
 gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
           43184]
          Length = 999

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 23/181 (12%)

Query: 122 VYLLE---VQIAL---AERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNS 172
              LE    + A      + Y  A E  + +    + P  R+ A   +   + + G    
Sbjct: 797 TKFLEESVARTAEIEYLSKDYPAALESFKRLQIVAENPENRQAARLGIMRCALQTGQQKD 856

Query: 173 AQRYATKAL---DISPDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-I 227
           A   A + L    +SP+          + Y+  K+ ++A+  L +  K+ +  +   A  
Sbjct: 857 ALLAADELLKEPKLSPELEAEARYVRAKAYIAQKQANKALADLKELSKDTRTVHGAEAKY 916

Query: 228 LLIARSLENADKGDMIASYHDAIESLK-----LCDNSIMASICAAKSLISQNKKRKAEVI 282
           LL     +  D  +      + IE+       L    I      A   I Q    +A   
Sbjct: 917 LLAQLYYDTNDDKNAEKVLMNFIENGTPHQYWLARGFI----LLADIYIRQGDDFQARQY 972

Query: 283 L 283
           L
Sbjct: 973 L 973


>gi|197120109|ref|YP_002140536.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197089469|gb|ACH40740.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 1450

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 18/187 (9%)

Query: 186  DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD------- 238
            D+PW     + +     +W   +  + +                 A S   A+       
Sbjct: 877  DSPWYPTLRLFRQKQQGDWEEVVARVKEALARKASPASVSPQAFPAESRAQAEIWNNRGC 936

Query: 239  ----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                +G  + +     +++ L  + + A      SL +  +  +A       W +   P 
Sbjct: 937  AEDGEGCHLEAVESYRKAIALSPDFMPAHYNLGNSLFALGRSGEAAESYR--WALALDPA 994

Query: 295  IANIY----THLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            +   +      L ++  V   L    R   +  + +E+   + ++  E G +D+A A   
Sbjct: 995  LPQGWHNLALALKAQGAVDEALHALRRAVRVAPDYLEARHTLGQLHHERGELDEAMASFR 1054

Query: 350  LAMKIAP 356
              +   P
Sbjct: 1055 ENLSRDP 1061



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 6/159 (3%)

Query: 134  RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             +   A E     L +        ++L       G ++ A     +A+ ++PD       
Sbjct: 976  GRSGEAAESYRWALALDPALPQGWHNLALALKAQGAVDEALHALRRAVRVAPDYLEARHT 1035

Query: 194  VVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIES 252
            + Q +    E   A+    +       +     A+ +  + L   ++     +     ++
Sbjct: 1036 LGQLHHERGELDEAMASFRENLSRDPGYLPSWNAMGISLQVLGLLEE-----AVDCYQKA 1090

Query: 253  LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            L L  + + A      +  S     +A+   EK+ +++P
Sbjct: 1091 LALKPDYLHALNNLGTASRSLGLLAQAKSCYEKVLELDP 1129


>gi|206601977|gb|EDZ38459.1| Probable TPR-domain containing protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 1076

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 11/254 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            LAE + N A  + + +L+I        Y L     + G +  +     +A  ++P    
Sbjct: 46  YLAEGKLNEAVIEFQNLLKINPKSAIGHYDLGQAYRKKGWIIESVIQDREATKLAPLMLP 105

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+ +  + + +WS A   +    K   + N      L  + +     G    +  D 
Sbjct: 106 AHLALAEYAINSGQWSPAKEEIAAILK--IDPNNAEGYALAGQRMLGL--GREKEADQDL 161

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSEN 306
             +L +      A +        Q    KA    E+  + N  P +    T    L    
Sbjct: 162 KHALSIEPGFARALVALGDLKRKQGHPAKARSYYEQALQAN--PSLGRALTGLGMLAQSE 219

Query: 307 TVGKLKR--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
              +L R    +  + +  ++ S ++ +      G + +A +   +         + + +
Sbjct: 220 NNAELAREEFQKSLKADPYNLRSRIVYANFLASGGHLHKAISALEVISAKKADVRVPVKI 279

Query: 365 AQIEQANSHNTDKI 378
           A+ E     N   I
Sbjct: 280 AEYETLLGANQKAI 293



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 101/349 (28%), Gaps = 58/349 (16%)

Query: 96  AAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           A   + LA K          S            L   +  +   Q   A  +L  +L+ P
Sbjct: 581 ALGEVLLAEKQRDAANKAFHSALIFNPENPAAILEVSKSEILSGQGQEALTRLSALLKSP 640

Query: 151 -----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
                      ++ L  E  + GD   A++    A  + P  P    ++   +     W 
Sbjct: 641 LAKDRKAEVEWLWGLANE--QSGDPAKAEKALVLATTLDPQNPGYHASLGDFWADRSRWE 698

Query: 206 RAIT-------------FLNQKK-------KNAKEWNRNRAILLIAR------------- 232
            A                L  KK           +  R R ++ +A              
Sbjct: 699 DARKEYRKSLSLQSNNPVLEMKKEWLSVQSSRKPDPGRIRKVIALAETYRASHPSDISAT 758

Query: 233 ---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +           +       L    ++  A +  A  L+SQ K  KA+ +      +
Sbjct: 759 MLEAQGELLLKKPEKALPLFDAILSSHPDNTGARLGKAGILLSQGKTEKAKNL--ATMIL 816

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             HP+     +        + +   +  R  +L + + + ++  + +  + L++    +A
Sbjct: 817 ADHPDNLAANLLMTRIDQKNNDFTDEADRLEKLHQKHPDWIQPSLTLVAVDLKLKRFREA 876

Query: 345 HAKAMLAMKIAPR---KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            + A   + + P           A+++ A+     + L     A     
Sbjct: 877 ESIADSILTVQPDLYNARFLKAQAELDMADYRGALRNLSILAKANKKPA 925



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 14/233 (6%)

Query: 102 LARKMHSYV---SQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           LA +        ++ +   +       L    + L   +   A    + +L        A
Sbjct: 485 LANRQSREALLTAKAYLKDHPDNTNVRLFLANLYLRSGKLPQARRTYKTILTTDPKNLPA 544

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V SL   +    +   A+    +AL +SPD   +  A+ +  +  K+   A    +    
Sbjct: 545 VLSLASIAMTQKNYPEAESDFRRALTLSPDNSGLYSALGEVLLAEKQRDAANKAFHSALI 604

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NK 275
              E     AIL +++S   + +G    +   A+    L  +              Q   
Sbjct: 605 FNPE--NPAAILEVSKSEILSGQGQEALTRLSALLKSPLAKDRKAEVEWLWGLANEQSGD 662

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINK 322
             KAE  L     ++P     H  + + +      E+   + +++L L+  N 
Sbjct: 663 PAKAEKALVLATTLDPQNPGYHASLGDFWADRSRWEDARKEYRKSLSLQSNNP 715



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 97/269 (36%), Gaps = 23/269 (8%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRY 176
             ++ +   +I L E +   A + LE +  +P       Y L     +  +   + A   
Sbjct: 340 PPILKIGAARIELFEGKPREASKVLESLANVPD--LPPTYPLTQSQVALALNRPDQAISI 397

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            T AL  SP    +  ++    +  K+W  A+T +N       E        L A   + 
Sbjct: 398 LTHALARSPGNIDLQLSLADARMRLKQWKPALTLINTVLSEHPE-------NLPAIQRKG 450

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294
              G    +            +         +SL++  + R+A  +  K +  + HP+  
Sbjct: 451 FLLGKTSGASVQIGFLKHEASSLPRVEPLYLQSLLANRQSREAL-LTAKAYLKD-HPDNT 508

Query: 295 -----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                +AN+Y  L S       +    +   + +++ +++ ++ IA+   +  +A +   
Sbjct: 509 NVRLFLANLY--LRSGKLPQARRTYKTILTTDPKNLPAVLSLASIAMTQKNYPEAESDFR 566

Query: 350 LAMKIAPRKE-IFLLLAQIEQANSHNTDK 377
            A+ ++P    ++  L ++  A       
Sbjct: 567 RALTLSPDNSGLYSALGEVLLAEKQRDAA 595


>gi|88797081|ref|ZP_01112671.1| TPR repeat protein [Reinekea sp. MED297]
 gi|88779950|gb|EAR11135.1| TPR repeat protein [Reinekea sp. MED297]
          Length = 852

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 90/302 (29%), Gaps = 45/302 (14%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYAT 178
              L       + + + A       ++      +A    Y ++      GDL +A+    
Sbjct: 224 TLELLADTLTRQGKPDEAL-IYSRAIRDANPEAYAARQQYLDALNAASLGDLATARSTFE 282

Query: 179 KALDISPDAPWVT----------------EAVVQ------------------QYVLAKEW 204
             L+  P+                     EA++                         + 
Sbjct: 283 DILNQFPNNRQAALLLGLLRLEEGNIDEGEALLSQNIEAETAPVNIIRATALAQAEQGKP 342

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            +A+  L +      +       LL    +    +G+  A      ++L L        +
Sbjct: 343 KQALAVLEKALLARPD----DPTLLSLYGVIALSQGEEQAGIRSITKALTLSPQQTRLHL 398

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINK 322
             A+     ++   A       ++ NP   P        L + ++         L     
Sbjct: 399 LLAQHYEETDQIDLALGHYRSAFEKNPADWPTTGAYLVLLTNADSTDTSGVMDTLATQYS 458

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDKILYW 381
           + V++L +++      G++DQA ++    ++I P +   L+  A++     +    + YW
Sbjct: 459 DQVDALWLMAMTHYRQGNLDQAQSRLNQLLEIDPHRTDALIAKARLLSQEGNARAAVPYW 518

Query: 382 TQ 383
             
Sbjct: 519 LS 520



 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 98/302 (32%), Gaps = 35/302 (11%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSLY 161
           + +           ++  +  L   IAL++ +       + + +   P  TR   +  L 
Sbjct: 344 QALAVLEKALLARPDDPTLLSLYGVIALSQGEEQAGIRSITKALTLSPQQTRLHLL--LA 401

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNA 218
                   ++ A  +   A + +P A W T     V+     + + S  +  L  +  + 
Sbjct: 402 QHYEETDQIDLALGHYRSAFEKNP-ADWPTTGAYLVLLTNADSTDTSGVMDTLATQYSDQ 460

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +        L   ++ +  +G++  +     + L++  +   A I  A+ L  +   R 
Sbjct: 461 VDA-------LWLMAMTHYRQGNLDQAQSRLNQLLEIDPHRTDALIAKARLLSQEGNARA 513

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV----SKI 334
           A      +  VNP    A      +    +   +    L    +   ++ + +     ++
Sbjct: 514 AVPYWLSVLNVNPENRTALNELVRIQSRQLSSQELINWLVAQQQSYPQAAIALRSVSVEL 573

Query: 335 ALEMGSIDQAHAKAMLAM-KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
           A+  G +DQA   A   +    P      + A + +               A+ A  D  
Sbjct: 574 AVNEGRLDQAKQIAQPDLHSEDPYAR--RIRANLLRGE-------------AIVAANDLQ 618

Query: 394 WI 395
           W 
Sbjct: 619 WT 620



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 4/114 (3%)

Query: 110 VSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            +      N+      +++    +L    +++A    E  L        A+ +L +   R
Sbjct: 723 AAANLLLDNQPNSVSAHMVLASHSLNNGDHDVAVNHYETALTFSPELVPALNNLAWLK-R 781

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             D   A   A KA +++P++  V +       L  E  +AI+ L++      +
Sbjct: 782 DADPERALSLAKKAANLAPESASVLDTYGWLLHLNGESEQAISVLDRALALEPD 835


>gi|118100678|ref|XP_417426.2| PREDICTED: similar to PRP6 pre-mRNA splicing factor 6 homolog
           (yeast) [Gallus gallus]
          Length = 941

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 103/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 696

Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L + +                  +  +     + LK C +SI   +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPHSIPLWLLLSRLEEKV 756

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIV 331
            +  +A  ILEK    N  P+ A+++   +       LK      + +  +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKN--PKNADLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|325578220|ref|ZP_08148355.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159956|gb|EGC72085.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 392

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 60/200 (30%), Gaps = 44/200 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151
             +  A ++H  + +   +  E    LL  Q     +       Y+ A     +M+  P 
Sbjct: 91  GEVDRALRIHQALDRSPNYSFEQ--KLLAKQ--QLAKDFMAVGFYDRAEALYIIMVDEPE 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             E A+  L     +  +   A   A K   ISP                          
Sbjct: 147 FAENALQQLLVIYQKTKEWKKAVNIAEKLAKISPK------------------------- 181

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                   E +   A      SL    +  ++       ++L +   S+ AS+  A   +
Sbjct: 182 --------ENDVELAQCYCEYSLSGELES-VVEKRSILQKALNVSPTSVRASMLLADLEM 232

Query: 272 SQNKKRKAEVILEKIWKVNP 291
           +    R+A   LE I   NP
Sbjct: 233 ADKNYRQAIHFLENILNQNP 252


>gi|30248607|ref|NP_840677.1| putative protein porphyrin biosynthesis [Nitrosomonas europaea ATCC
           19718]
 gi|30180202|emb|CAD84504.1| putative protein porphyrin biosynthesis [Nitrosomonas europaea ATCC
           19718]
          Length = 389

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 60/370 (16%), Positives = 120/370 (32%), Gaps = 32/370 (8%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
               V  T        +       +   LFA+IL +A+ R       +           K
Sbjct: 24  NTGSVLFTVPPYKVELAFNTF---VLILLFAFILFYALLRALSGLSGL--------RSRK 72

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
             +   +GL +          +  +   +     +   + +L   +A         +   
Sbjct: 73  VEQLTRSGLKAFF---ETRYDRAVALAEKAARLADRQTIKVLNAVVAARSAHQQRNYALR 129

Query: 144 EMMLQIPATREFAVYSLYFESC--------RIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           + +L +   +  A  +L   +         R GD  +A +    +L  +         ++
Sbjct: 130 DRLLAVAREQAPAGRALALIAEAELLLDEGRHGDALAALQ----SLYSTGGLQSTAVLLL 185

Query: 196 QQYVL--AKEWSRAITFLNQKKKNAKEWNRNRAILLIARS-LENADK-GDMIASYHDAIE 251
           +      A  W   +  L +   N    +R     L  R+ LEN  K    IAS      
Sbjct: 186 ELKARQMAGNWDAVLE-LTKVLVNRPAVDRTLIDELRFRAHLENIRKNAKDIASLRKYWG 244

Query: 252 SLKLCDNS-IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           SL   +      ++ AA++LI       A+ I+E      P+PE+  +Y    S     +
Sbjct: 245 SLSYREKLDGRLAVAAARALIFLGDNATAQKIIENGLDAQPYPELVTLYADCKSGVVSWQ 304

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
           ++RA         +   L+ + ++        +A +    ++ I P   + L LAQ+ + 
Sbjct: 305 IQRAESWLAKYPNNAGLLLTLGRLCTYGELWGKAQSYLEASLSIEPGYPVHLALAQLFEK 364

Query: 371 NSHNTDKILY 380
                    +
Sbjct: 365 LGKQEAASEH 374


>gi|307131408|ref|YP_003883424.1| hypothetical protein Dda3937_04037 [Dickeya dadantii 3937]
 gi|306528937|gb|ADM98867.1| conserved protein [Dickeya dadantii 3937]
          Length = 389

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 95/290 (32%), Gaps = 54/290 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  +++  +   E    LL VQ      +    Y+ A E  + ++     R
Sbjct: 83  GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMVAGLYDRAEEIFKQLVDEEDFR 140

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+                                  + ++Q +    +W  AI    +
Sbjct: 141 VSAL----------------------------------QQLLQIHQSTSDWPNAIDTAEK 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K   R+  A     +SL+     D+  +     ++    +     SI   +  ++
Sbjct: 167 LVKLGKTQLRSEIAHFYCEQSLQAMGSDDLDKAMTMLKKASAADNQCARVSIMLGRIYMA 226

Query: 273 QNKKRKAEVILEKIWK------VNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESV 325
           Q    +A  +LE++ +          P +   Y HL   EN    L+R     E    S 
Sbjct: 227 QQNYAQAVAVLEQVLQQDMELVSETLPMLQECYRHLQQPENWAAFLRRC---VEEKSGST 283

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373
            + ++++ +  +  S + A       ++  P   +F  L    + +A   
Sbjct: 284 -ADLMMADVLEQYESTESAQTYVTRQLQRYPTMRVFHRLIDYHLREAEDG 332


>gi|196233636|ref|ZP_03132477.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196222306|gb|EDY16835.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 752

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 80/230 (34%), Gaps = 13/230 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +   A      +L     +  A++ L   + R G    A     +AL+ +P       
Sbjct: 19  AGRLPEAEALYRQILNAQPGQPDALHLLGVVAHRSGRPEIAVELIQQALNAAPQHVAAHF 78

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +            A     +  +   ++ +    L  A +     +G    +      +
Sbjct: 79  NLGNALSELGRMEEAADAFGRATELQPDYAQAHHNLGSALAK----RGRFDEAIAAFQRA 134

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSEN 306
           ++L  +   A      +L +Q ++ +A    ++   + P     H  + NI+      + 
Sbjct: 135 IELKPDYASAYNNLGLALKAQARRDEALAAFQQAIALQPDHAEAHFNLGNIFREWARPQE 194

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +   +RA    EIN +  ++L  +     + G +D+A A    A++I P
Sbjct: 195 AMTAFRRA---LEINPDYADALNNLGITLADAGRLDEAIACYRRALQINP 241



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 88/246 (35%), Gaps = 12/246 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
                ++LL V +A    +  IA E ++  L        A ++L      +G +  A   
Sbjct: 38  GQPDALHLLGV-VAHRSGRPEIAVELIQQALNAAPQHVAAHFNLGNALSELGRMEEAADA 96

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A ++ PD       +         +  AI    +  +   ++    A   +  +L+ 
Sbjct: 97  FGRATELQPDYAQAHHNLGSALAKRGRFDEAIAAFQRAIELKPDYAS--AYNNLGLALKA 154

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             + D   +     +++ L  +   A            + ++A     +  ++N  P+ A
Sbjct: 155 QARRD--EALAAFQQAIALQPDHAEAHFNLGNIFREWARPQEAMTAFRRALEIN--PDYA 210

Query: 297 NIYTHL-LSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           +   +L ++    G+L  A     R  +IN    E+   +     E+  +D+A A     
Sbjct: 211 DALNNLGITLADAGRLDEAIACYRRALQINPAGAETNTNLGNALFELQRLDEAAAAFRAV 270

Query: 352 MKIAPR 357
           +++ P 
Sbjct: 271 IELKPD 276


>gi|196046645|ref|ZP_03113869.1| TPR domain protein [Bacillus cereus 03BB108]
 gi|218902730|ref|YP_002450564.1| TPR domain protein [Bacillus cereus AH820]
 gi|225863482|ref|YP_002748860.1| TPR domain protein [Bacillus cereus 03BB102]
 gi|196022578|gb|EDX61261.1| TPR domain protein [Bacillus cereus 03BB108]
 gi|218538116|gb|ACK90514.1| TPR domain protein [Bacillus cereus AH820]
 gi|225789815|gb|ACO30032.1| tetratricopeptide repeat protein [Bacillus cereus 03BB102]
          Length = 420

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|58583709|ref|YP_202725.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625517|ref|YP_452889.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58428303|gb|AAW77340.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369457|dbj|BAE70615.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 421

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 113/361 (31%), Gaps = 31/361 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   YR +    L +L   +    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K    KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYF----ESCRIGDLNS 172
            L     V++A A      A    + + +   T          L      E+    D  +
Sbjct: 120 ALAS--AVRVADARGDEAAATALAQQLAERDPTAYALLQGERHLARQRPVEAINALDSAN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +       T A+ Q     + + +      Q       ++   A L    
Sbjct: 178 AQPLPARGLLLR------THALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLAEQT 231

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            L+ +D   +   +    ++L+ C   + A +  AA            E  L+  W  + 
Sbjct: 232 LLQASDANALAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDES- 290

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +Y  L  E    +   A R      +S   L+ ++++A       QA      A
Sbjct: 291 ---LVRLYGVLPLEKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347

Query: 352 M 352
           +
Sbjct: 348 I 348


>gi|163939435|ref|YP_001644319.1| TPR repeat-containing protein [Bacillus weihenstephanensis KBAB4]
 gi|163861632|gb|ABY42691.1| Tetratricopeptide TPR_2 repeat protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 420

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 294

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340
           +K                L   +    LK A  L+E  K   E L+ V + A++ G    
Sbjct: 295 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 339

Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362
               D A AK  L M        +  + 
Sbjct: 340 QLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|283853011|ref|ZP_06370269.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
 gi|283571621|gb|EFC19623.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
          Length = 455

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 92/288 (31%), Gaps = 22/288 (7%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A+ ++  A ++           +    +LL   +AL +  +  A +      +      
Sbjct: 170 VASGDLEQAERVT--AKAFEIKPDSLKCHLLMGDVALKKGDHPAAEKHYLAAARAEKLYI 227

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +  L       G+L+    Y T+   +SP        + + Y+   +  +A  F  + 
Sbjct: 228 EPLKKLVDLCRESGELDKRLAYMTRLDTLSPLNFERKVDIGEAYLAKGDNEKAKVFFEEA 287

Query: 215 KKNAKEWNRNRAILLIARSLENADK---GDMIASYHDAIESLKLCDNSIMASIC-----A 266
           ++      R  + ++    +E A K    D   +     E+++   +S+  S        
Sbjct: 288 RR---VVTRVASDMVSESLMEIARKIGDKDQDMALRFVTEAIEAKGDSLGISDLWMFNNR 344

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKL--KRALRLE 318
              L  Q    +A     K   ++P  +      +   Y      +T  +   K      
Sbjct: 345 GILLRRQGLWAEAVENYRKALTISP-RDGGLLYNLGVAYADGKQYDTAVRYFEKALEADP 403

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + K++      ++        + +A      A+ + P  E    + +
Sbjct: 404 SLVKQAPSVGYNIATAHHRCRDLPEARRFLQAALDLDPGYEAARRMLE 451


>gi|242239140|ref|YP_002987321.1| tetratricopeptide repeat protein [Dickeya dadantii Ech703]
 gi|242131197|gb|ACS85499.1| Tetratricopeptide domain protein [Dickeya dadantii Ech703]
          Length = 389

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 91/298 (30%), Gaps = 53/298 (17%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  +++  +   E    LL VQ      +    Y+ A    + ++     R
Sbjct: 83  GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMTAGLYDRAEGIFKQLVDEDEFR 140

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                                                 + ++Q +    +W  AI    +
Sbjct: 141 -VG---------------------------------ALQQLLQIHQSTSDWPNAIDTAEK 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A     ++L+     DM  +     ++    +     SI   + L++
Sbjct: 167 LVKLGKDQLRAEIAHFYCEQALQAMGSDDMDKAMGLLKKAAAADEQCARVSIMVGRILMA 226

Query: 273 QNKKRKAEVILE------KIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESV 325
           Q +  +A  +LE      K +     P +   Y +L   E  +  L+R     E    S 
Sbjct: 227 QQQYERAVGVLEQVLEQDKEFVSETLPMLRECYQYLQQPEGWIAFLRRC---VEEKSGST 283

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
            + ++++    ++ S + A       ++  P   +F  L            +      
Sbjct: 284 -ADLMMADTLEQLDSAEAAQMYVTRQLQRHPTMRVFHRLIDY-HLRDAEDGRAKESLA 339


>gi|332163410|ref|YP_004299987.1| cellulose synthase subunit BcsC [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667640|gb|ADZ44284.1| cellulose synthase subunit BcsC [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 1168

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138
           GL    A +   A ++     +       +     L+      LL  E   AL      +
Sbjct: 314 GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTAL 373

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   QI  +  +A+  L   +    D  +A+++  +AL + P        +   Y
Sbjct: 374 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 433

Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN     Q+ K     N  +  +L  ++   A +     +     ++ 
Sbjct: 434 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAETLAAQQQWHQAAEKYRQAQ 492

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           K+  N +  +   A++L       +A+ 
Sbjct: 493 KMAPNDVWITYRLAQALAQDGHLAQADA 520



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 144 EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           + ML  P    R   +          G   +A     +AL  SP+ P +  A+   Y  A
Sbjct: 266 QAMLADPTYQARLSGL-----AKVDSGSGVAAIPALKQALAASPNDPEILGALGLAYARA 320

Query: 202 KEWSRAITFLNQKKKNAKEW----------NRNRAILLIARSLENADKGDMIASYHDAIE 251
            + ++A+    Q +K+ K+             NR  LL     +    G+   +     +
Sbjct: 321 GDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTALAQQKYQQ 380

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           + ++  +   A I      ++++  + AE   ++  +++P
Sbjct: 381 ARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDP 420


>gi|255562045|ref|XP_002522031.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
 gi|223538835|gb|EEF40435.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
          Length = 979

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 88/258 (34%), Gaps = 23/258 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A N   A +  + V ++     + L  LL               +  E +   P  R   
Sbjct: 68  AGNYKQALEHSNTVYERSPLRTDNL-LLLGAIYYQLHDYDMCIEKNEEALRLEP--RFAE 124

Query: 157 VYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y     +    GD++ A RY   A+++ P+       +   Y+     + A     Q  
Sbjct: 125 CYGNMANAWKEKGDIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLNEAAQCCRQAL 184

Query: 216 KNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  + + N   L+ A+ L       +  +Y   +E+L++     +A    A   + 
Sbjct: 185 ALNPLLVDAHSNLGNLMKAQGL-------VQEAYSCYLEALRIQPTFAIAWSNLAGLFLE 237

Query: 273 QNKKRKAEVILEKIWKVNPH-PE----IANIYTHL-LSENTVGKLKRALRLEEINKESVE 326
                +A    ++  K+ P  P+    + N+Y  L + +  +   +RA    +       
Sbjct: 238 SGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVCYQRA---VQTRPNYAV 294

Query: 327 SLVIVSKIALEMGSIDQA 344
           +   ++    E G +D A
Sbjct: 295 AFGNLASTYYERGQLDLA 312



 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 70/220 (31%), Gaps = 17/220 (7%)

Query: 98  HNIPLARKMHSYVSQQHTF---HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
             +  A +        +      +  L  L++ Q          A+      L+I  T  
Sbjct: 171 GRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQ-----GLVQEAYSCYLEALRIQPTFA 225

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A  +L       GDLN A +Y  +A+ + P  P     +   Y        AI    + 
Sbjct: 226 IAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVCYQRA 285

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +    +    A+     +    ++G +  + H   +++      + A      +L    
Sbjct: 286 VQTRPNY----AVAFGNLASTYYERGQLDLAIHHYKQAIACDGRFLEAYNNLGNALKDVG 341

Query: 275 KKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVG 309
           +  +A     +   + P HP+    + NIY      +T  
Sbjct: 342 RVEEAIQCYNQCLALQPSHPQALTNLGNIYMEWNMASTAA 381


>gi|253700213|ref|YP_003021402.1| hypothetical protein GM21_1589 [Geobacter sp. M21]
 gi|251775063|gb|ACT17644.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 572

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 62/170 (36%), Gaps = 11/170 (6%)

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+ +      +   A+  L Q   +        A L  A +     +     +  ++  +
Sbjct: 52  ALARLRAGEGDQDAALALLRQAMASDPGA----AYLHTAAAQYLLQQHKPEEALAESQAA 107

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-----LLSENT 307
           +K+    + A + +   L++  ++++A    +K+ +++P  E   +Y H     L S   
Sbjct: 108 IKIDPTFLQAQLLSGNILMTMQREKEAIPYYKKVMELDPTKE--EVYLHVAIYYLKSFEY 165

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +     L +   +S      ++K   +M    +A      A+ + P 
Sbjct: 166 EQAVDTLKGLVKAAPDSALGYYYLAKTYEQMRLPREALGYYKKALDLKPD 215


>gi|331649352|ref|ZP_08350438.1| cellulose synthase operon protein C [Escherichia coli M605]
 gi|330909587|gb|EGH38101.1| cellulose synthase operon protein C [Escherichia coli AA86]
 gi|331041850|gb|EGI13994.1| cellulose synthase operon protein C [Escherichia coli M605]
          Length = 1157

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 90/269 (33%), Gaps = 15/269 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVIGLGDVAMARKDYPAAERYYQQTLRMDS 416

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++    I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ KA+ ++  + +  P+ PE    Y 
Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSKADTLMRNLAQQKPNDPEQVYAYG 536

Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351
             LS +   +  L     L   + N    E  + +    V + A  +    +      + 
Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQVLETANRLRENGKEAEAEAML 596

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            +  P   I L LA   Q    +      
Sbjct: 597 RQQPPSSRIDLTLADWAQ-QRRDYTAARA 624



 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVIGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSKADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD + +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPMQALETYKDAM 738


>gi|154150715|ref|YP_001404333.1| TPR repeat-containing protein [Candidatus Methanoregula boonei 6A8]
 gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
          Length = 4079

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 34/278 (12%)

Query: 99   NIPLARKMHSYVSQQHTFH----NEYL---VYLLEVQIALAERQYNIAHE----KLEMML 147
            +     ++  +    H F      E     +   + +   A  +++ A E        + 
Sbjct: 2936 DGRAWARLGQFEDAIHLFDIALGKEPGNGEILFEKAKALAALGRHDEAQEIFRLAFTQLT 2995

Query: 148  QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                     +  L   +        A      AL +SPD P + E      + A  +  A
Sbjct: 2996 DNYEPAY--LRGLSLLALER--YEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGA 3051

Query: 208  ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            +   +       +     A L   R+L   ++ D   +  D  + L L     +AS    
Sbjct: 3052 VAAFDHAISLLPDDPG--AYLERGRALAALNRNDEAVASFD--QVLALEPADPVASFERG 3107

Query: 268  KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK----LKRALRLEEINK 322
            ++L    K   A   L+     +P HP    +Y    S   + +     +   RL     
Sbjct: 3108 RALYYAAKYEHAVEALDTTLSSDPRHP--GALYFRAASLAALERYAEAAESFERLLVYTP 3165

Query: 323  ES----VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            E+     E   +++++       D+A A     + + P
Sbjct: 3166 ENADAWYEQGCVLARL----RHYDEAIAAFDHVLNLVP 3199



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 14/203 (6%)

Query: 161  YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                 R G+  +A     K L I P++        + ++  ++   AI   N+       
Sbjct: 3654 LIHLERTGEALAAI---EKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALA---- 3706

Query: 221  WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             NR  A     +    A KG    +      +L++  +   A     ++L    + ++A 
Sbjct: 3707 INRQFAEAHYYKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEAL 3766

Query: 281  VILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
               ++    NP    A       Y  L + +   +     R  E+N    ++    ++  
Sbjct: 3767 AAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIR--SFDRALEVNPSCFQAHYWKARTL 3824

Query: 336  LEMGSIDQAHAKAMLAMKIAPRK 358
             + GS D A  +   A+ I P +
Sbjct: 3825 YDEGSYDAAITEYDRAIAIKPDR 3847



 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 84/277 (30%), Gaps = 39/277 (14%)

Query: 111  SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGD 169
            +           + L+     A+  Y  +       +   P + E A+         +G 
Sbjct: 1459 AALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLH-NLGQ 1517

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
               A   A KA++I PD                 +  ++  L+     A +    R    
Sbjct: 1518 DEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVEALDHAL--AGDPKNARVNYQ 1575

Query: 230  IARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R+ +   +  + I++Y  A+++     + I A +   ++L+  ++ R A         
Sbjct: 1576 KGRAFDGLGQYENAISAYDAALQAQ---PDCIPARMHKGEALLFISRFRDAT-------- 1624

Query: 289  VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                                   K   ++   + ++ E+ + +++    +G   +     
Sbjct: 1625 -----------------------KEFGKILTEHPDNAEAWIKMARARFSLGDYTEVIEAC 1661

Query: 349  MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
              A++        LL   + Q      ++ +     A
Sbjct: 1662 DHALRFNADSAEALLYRGLAQYELGRYEEAVESLARA 1698



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 75/234 (32%), Gaps = 11/234 (4%)

Query: 126  EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            +     A  ++  A       + +      A Y        +G    A R     L   P
Sbjct: 3514 KGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHP 3573

Query: 186  DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   A  +       +  AIT  ++      ++    A L    +  N ++ +   +
Sbjct: 3574 SCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYP--EAWLYRGIAEANLEEFE--EA 3629

Query: 246  YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
                  +L   ++   A +   ++LI   +  +A   +EK+  +   PE A+ +      
Sbjct: 3630 LDCYNHALAQNESYATALLNKGRALIHLERTGEALAAIEKVLTIQ--PESADAFYYKGRA 3687

Query: 301  HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            HL        +    R   IN++  E+           G  ++A A    A++I
Sbjct: 3688 HLNRRQDDDAIDAFNRALAINRQFAEAHYYKGTALARKGQYEEAVAAFDAALRI 3741



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 19/255 (7%)

Query: 107  HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAV-YSLYFES 164
             ++           ++     +     R Y +A + L   +   P      +       +
Sbjct: 2271 SAFDRALTLGPETAVIQYYRGRALAEMRDYGVALDALNRAIGLDPENSFTWLAKGSVLLA 2330

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             + G   +A     +AL + P A        + + L      AI   +        +   
Sbjct: 2331 QKDG--AAAVAAFDQALVLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEG 2388

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                   + L      +   +      +++       A      +L +  K  KA     
Sbjct: 2389 S----FKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFT 2444

Query: 285  KIWKVNP-------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
               + +P       H  +A  Y  L   +    L    +L E   ++ E+L    ++  +
Sbjct: 2445 HALEHDPSLSDALFHTGLA--YAALSRYSPA--LSAFDKLLESGPQNAEALFQKGRMLAK 2500

Query: 338  MGSIDQAHAKAMLAM 352
            +G  D+A A    ++
Sbjct: 2501 LGRPDEALAVLETSL 2515



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 18/222 (8%)

Query: 166  RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            R G  + A    ++A+      P       +  +   E  +A+T   +      + +   
Sbjct: 2806 RAGKNDEAVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRAL--DLDTSFGD 2863

Query: 226  AILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A   +  +LE   K  D I +Y   + +     +   A      +     +   A    E
Sbjct: 2864 AAYYLGLALERVGKFTDAITAYDRMVAAR---PDHSDAWYHRGIASERLGRDNDAVQAYE 2920

Query: 285  KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS 340
            K  ++ PH  +  ++    +   +G+ + A+ L +I       + E L   +K    +G 
Sbjct: 2921 KARQIEPH-NLPLLFADGRAWARLGQFEDAIHLFDIALGKEPGNGEILFEKAKALAALGR 2979

Query: 341  IDQAHAKAMLAMK------IAPRKEIFLLLAQIEQANSHNTD 376
             D+A     LA                 LLA +E+    +  
Sbjct: 2980 HDEAQEIFRLAFTQLTDNYEPAYLRGLSLLA-LERYEDADMA 3020


>gi|91789511|ref|YP_550463.1| putative porphyrin biosynthesis-like protein [Polaromonas sp.
           JS666]
 gi|91698736|gb|ABE45565.1| putative porphyrin biosynthesis related protein [Polaromonas sp.
           JS666]
          Length = 429

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 105/398 (26%), Gaps = 54/398 (13%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   +    +  + +   +   +    V+I W       S  +++ +L  F         
Sbjct: 1   MRAALWLVALFGVAVAVALFAGNNQAVVTIFWPPHRLDVSFNLMVLVLAGFFMLLYGALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                 + P        ++     Y +L   L ++ A     A K             E 
Sbjct: 61  AVSALFALPLEARRWRAQQKERAMYGSLMDSLANLLAGRYIRAAKSAQNA-----LVQEK 115

Query: 121 LVYLLEVQIALAERQ---YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            + LL  Q   A       +     L  +L   + +     +L  +  ++   N+AQR+A
Sbjct: 116 SLGLLTDQTGHATGHSASRSTQLRSLAHLLVAESAQSLQNRALRDQHLQLALQNAAQRHA 175

Query: 178 TKALD--ISPDAPWV-----TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +  +      A W        A ++      +   A   L  + K        + +L +
Sbjct: 176 QEVREGVQLRAARWALEDRDAGAALEWLTQLPQ-GAARRTLALRMKLRATRQVKQTLLAL 234

Query: 231 ----------------------ARSLENADKGDMIASYHDA----IESLKLCDNSIMASI 264
                                   +LE  +     A    A     ES +     ++ + 
Sbjct: 235 DTARLLAKHRAFSQAAAQSIVRGLALELLNDAHDPAQLQQAWFSLDESERAMPELVVHA- 293

Query: 265 CAAKSLISQNKKRKAEVILEKIWKV--NPHPEIANIYT--------HLLSENTVGKLKRA 314
            A++ +        A   L ++W     P  EI +             L       L R 
Sbjct: 294 -ASRLMALHGDAGLARTWLLQVWDRMMEPRSEIGDNLRIKLITGLEAGLDSLDAAWLARI 352

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              +           +     L      +A      A 
Sbjct: 353 EAAQLSRPRDANLQYLAGMACLNRQLWGKARQLLSQAA 390


>gi|74007678|ref|XP_858808.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform
           8 [Canis familiaris]
          Length = 1048

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 109/308 (35%), Gaps = 28/308 (9%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             + H  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 96  EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 153

Query: 123 YLLEVQIALAERQ--YNIAHEKLEMM---LQIPATR---EFAVYSLYFESCRIGDLNSAQ 174
            LL+    L E +  Y  A   +  M   L+   T+     A  +L       G++  A 
Sbjct: 154 NLLKALGRLEEAKPPYATALHMMRNMACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAI 213

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            +  KA+ + P+       +      A+ + RA+    +    +     N A++    + 
Sbjct: 214 HHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLAC 269

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP 293
              ++G +  +      +++L  +   A    A +L  +    +AE       ++ P H 
Sbjct: 270 VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA 329

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAM 349
           +  N   ++  E   G ++ A+RL         E   +   ++ +  + G + +A     
Sbjct: 330 DSLNNLANIKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 387

Query: 350 LAMKIAPR 357
            A++I+P 
Sbjct: 388 EAIRISPT 395



 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P  P     +  
Sbjct: 244 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLAN 303

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                   + A    N   +         A  L   +    ++G++  +     ++L++ 
Sbjct: 304 ALKEKGSVAEAEDCYNTALRLCPT----HADSLNNLANIKREQGNIEEAVRLYRKALEVF 359

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K ++A +  ++  +++P    A+ Y+++ +     ++  G L
Sbjct: 360 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FADAYSNMGNTLKEMQDVQGAL 417

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A A    A+K+ P 
Sbjct: 418 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 463



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 82/265 (30%), Gaps = 53/265 (20%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNR 223
              G L  A  +   AL + PD       +    V A +   A+       +   + +  
Sbjct: 89  KERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCV 148

Query: 224 NRAILLIARSLENADKGDMIASYHD--------AIESLKLCDNSIMA------------- 262
              +  + ++L   ++     +            +++++   N  +A             
Sbjct: 149 RSDLGNLLKALGRLEEAKPPYATALHMMRNMACYLKAIETQPNFAVAWSNLGCVFNAQGE 208

Query: 263 ----------SICA----AKSLISQNKKRKAEVILEKIWKV-------NP-----HPEIA 296
                     ++        + I+     K   I ++           +P     H  +A
Sbjct: 209 IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLA 268

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +Y    L +  +   +RA+ L        ++   ++    E GS+ +A      A+++ 
Sbjct: 269 CVYYEQGLIDLAIDTYRRAIEL---QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 325

Query: 356 PR-KEIFLLLAQIEQANSHNTDKIL 379
           P   +    LA I++   +  + + 
Sbjct: 326 PTHADSLNNLANIKREQGNIEEAVR 350



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 302 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 361

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 362 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 417

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 418 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 475

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 476 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 511


>gi|218961725|ref|YP_001741500.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730382|emb|CAO81294.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 552

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 63/174 (36%), Gaps = 13/174 (7%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              + W    T    K  +      N+   +   +L N   G+   +  + + +L L  +
Sbjct: 151 AREQRWKTLETTFIAKLDDVVSNEVNKIYNI---ALNNYANGNYAEAEKNLVFALGLNPD 207

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSEN--TVGKLKRAL 315
              A          Q K  +A   LE   + NP H +   I   +  +   T  +L    
Sbjct: 208 LKDAYYYLGSVYYKQGKLEQAIQNLELNLEKNPQHTQTLAILIDIYEKTNQTNKRLNAME 267

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP------RKEIFLL 363
           +L  IN E+ E  + ++ +  E  +I +A      A+++ P       +  FLL
Sbjct: 268 KLATIN-ENEELWLTIANLYSEQNNIAKAEEALQKALELNPNYIEAKTRLAFLL 320



 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 82/224 (36%), Gaps = 38/224 (16%)

Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A K    AL ++PD       +   Y    +  +AI  L    +   +  +  AIL+   
Sbjct: 194 AEKNLVFALGLNPDLKDAYYYLGSVYYKQGKLEQAIQNLELNLEKNPQHTQTLAILI--- 250

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             +  +K +      +A+E L   + +    +  A     QN   KAE  L+K  ++NP+
Sbjct: 251 --DIYEKTNQTNKRLNAMEKLATINENEELWLTIANLYSEQNNIAKAEEALQKALELNPN 308

Query: 293 PEIANIYTHLLSENTVGKLK-------RALR----LEEINKESVESLVIVSKIALE---M 338
                 Y          +L        R       LE I  +  E+ ++ +++A      
Sbjct: 309 ------YIE-----AKTRLAFLLYDHNRFEEAIPYLEAIFDKYPENELVSTRLANAYQKA 357

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLA----QIEQANSHNTDKI 378
             +D A AK    +K  P+  +  L A    +++   + +   +
Sbjct: 358 NRLDDAIAKYENTIKNNPQNTMAYLSAVNLYRLKATQTSDPAAV 401


>gi|238793251|ref|ZP_04636878.1| Cellulose synthase protein C [Yersinia intermedia ATCC 29909]
 gi|238727419|gb|EEQ18946.1| Cellulose synthase protein C [Yersinia intermedia ATCC 29909]
          Length = 1146

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 78/208 (37%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLL----------EVQIALAERQYNI 138
           GL    + +   A ++     +  +    ++  + L+          E   AL      +
Sbjct: 300 GLAYARSGDRAQALRLFEQAQKSDKDGLKSDKWISLIKTNRYWLLNDEGDKALKAGNTGV 359

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +    I  +  +A+  L   +    D  +A++Y  +AL + P        +   Y
Sbjct: 360 AQQKYQQARHIDGSDSYALIGLADVAVARHDDKTAEQYYQQALRLDPSNDSAVRGLSNIY 419

Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  +A+++LN     Q+ K     +  +  +L  ++   A +     +     ++L
Sbjct: 420 QRESP-QKALSYLNSLPRSQQAKMRDTLDSLQIDMLKQQAENLAAQQQWRQAAEKYRQAL 478

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           K+  + +  +   A++L  ++   +A+ 
Sbjct: 479 KMAPDDVWITYRLAQALAQEDHLAEADA 506


>gi|145589279|ref|YP_001155876.1| sulfotransferase [Polynucleobacter necessarius subsp. asymbioticus
            QLW-P1DMWA-1]
 gi|145047685|gb|ABP34312.1| sulfotransferase [Polynucleobacter necessarius subsp. asymbioticus
            QLW-P1DMWA-1]
          Length = 1764

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 11/199 (5%)

Query: 164  SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            +    D NSA  +  + + I+PD       +    V       AI  L +     + +  
Sbjct: 1217 ARAEKDKNSAIEWYQRVISIAPDYLESLSNLGAVLVELDRADEAIPILQKALSLNESYP- 1275

Query: 224  NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              A+  +  +    D+ D+  +       L+L           A+    Q++  +AE +L
Sbjct: 1276 -EALCNLGLARLKRDEIDI--AGRLLERCLQLRPGYPEGLTGLARIFNEQDRLPEAEQLL 1332

Query: 284  EKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
                K  P       ++A IYT L   +    L +   L  I  +S ++   +  ++LE 
Sbjct: 1333 LTALKNAPDKVDARCQLAAIYTELGKASAAEALYQ-EALV-IEPDSADAFTGLGNLSLEA 1390

Query: 339  GSIDQAHAKAMLAMKIAPR 357
            G+I+ A      A+++ P 
Sbjct: 1391 GNIELAEEYLNNAIQLQPD 1409



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 23/168 (13%)

Query: 208  ITFLNQKKKNAKEWNRNRAILLIARSLENA--------DKGDMIASYHDAIESLKLCDNS 259
            I F + K+    +    RA+ L    L++          + D  ++       + +  + 
Sbjct: 1181 IAFYDNKEFVKAKSCHERALALAPNMLQSLNNMGSIARAEKDKNSAIEWYQRVISIAPDY 1240

Query: 260  IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR------ 313
            + +       L+  ++  +A  IL+K   +N        Y   L    + +LKR      
Sbjct: 1241 LESLSNLGAVLVELDRADEAIPILQKALSLN------ESYPEALCNLGLARLKRDEIDIA 1294

Query: 314  ---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                 R  ++     E L  +++I  E   + +A    + A+K AP K
Sbjct: 1295 GRLLERCLQLRPGYPEGLTGLARIFNEQDRLPEAEQLLLTALKNAPDK 1342



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 29/93 (31%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                + Y  A    +  L++      +  +L     + G+ + A     KA +++P   
Sbjct: 155 AYTDAKDYTKAVAAYKKALKLNPKHGLSWNNLGSALEQSGNKDEALEAYIKAAELNPQHS 214

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                +   Y       +A T         K++
Sbjct: 215 EAQNNLGAIYSEQGLLEKARTGFEAAIDAKKDF 247


>gi|256810144|ref|YP_003127513.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86]
 gi|256793344|gb|ACV24013.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86]
          Length = 312

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 13/236 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES----CRIGDLNSAQRYATKALDISP 185
           AL    Y  +   ++ ML +       +  LY E      ++G    A +   KAL+++P
Sbjct: 15  ALENHDYERSLNLMDEMLNVEGLSSKEISELYAEKGKLLRKMGKNEEALKAYDKALELNP 74

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +            +       A     +      E N +  +     +      G    +
Sbjct: 75  NYILAYLYKGILLIHLGRLEEAERVFLK----LHELNPSDLVCKYIIAYVLKRLGKYSEA 130

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----TH 301
                + ++    + +A +   K L  + K +KA    EK  ++NP  +   +Y      
Sbjct: 131 QKIFDDVVERHPQAFIAWLMKGKLLHREGKLKKALECFEKALEINPK-DYELLYHKGEIL 189

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           L        L+    L E N   + SL+ + +I + +G I +A      A+K+ P 
Sbjct: 190 LKLGKYCEALECFKVLHEKNDRDISSLMHIIEILVLLGRISEAREYVEKALKLNPD 245



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 77/211 (36%), Gaps = 13/211 (6%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV-YLLEVQIALAERQYNIAHEKLEMM 146
           LY G++ I    +  A ++     + H  +   LV   +   +     +Y+ A +  + +
Sbjct: 81  LYKGILLIHLGRLEEAERVF---LKLHELNPSDLVCKYIIAYVLKRLGKYSEAQKIFDDV 137

Query: 147 LQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           ++       A   L       R G L  A     KAL+I+P    +     +  +   ++
Sbjct: 138 VERHPQAFIAW--LMKGKLLHREGKLKKALECFEKALEINPKDYELLYHKGEILLKLGKY 195

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A+     K  + K      +++ I   L     G +  +     ++LKL  +  M   
Sbjct: 196 CEALECF--KVLHEKNDRDISSLMHIIEILVLL--GRISEAREYVEKALKLNPDDPMIYF 251

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-PE 294
                L    +  +A    +K  ++NP+ P+
Sbjct: 252 FYGIILNKLGRYEEAIKYFDKALELNPNFPD 282


>gi|134096050|ref|YP_001101125.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans]
 gi|133739953|emb|CAL63004.1| Conserved hypothetical protein; putative exported protein; putative
           TPR repeat domain [Herminiimonas arsenicoxydans]
          Length = 602

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 103/267 (38%), Gaps = 11/267 (4%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--EFAVYS--LYFESCRIGDLNSAQRY 176
           L  LL  ++A     + +A   + M++    TR    A  +  +     + G+  SA R 
Sbjct: 75  LFKLLRAELAYQRGDWQLA--YVTMLVSAQETRDPRLARRAAEIALSVKQTGEALSAVRL 132

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +   ++P +    +  +   VL +  + A     ++ +  +   + R +L++      
Sbjct: 133 WRE---LAPHSDEANQFYLGLVVLGENLAEAKPIFTERLQEVRP--QARGLLILQIQRLL 187

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               D  A++    E      N +   I  ++   ++N   ++ +  +K  ++ P  EIA
Sbjct: 188 VRTKDKNAAFTLLEELTAPYQNLVETHIALSQGAFAKNDLARSRMESKKALEIKPDLEIA 247

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +     + N+V  L+      + N +S +  +  +K  ++   ++QA  +  + +K  P
Sbjct: 248 VLMLAQATPNSVDALRTLTAFLDKNPKSRDVRIAYAKTLIDDKQLEQARKQFEILLKDQP 307

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQ 383
                L    I  A  ++ +    +  
Sbjct: 308 DDLTILYATGILAAQMNDREGAEKYLT 334


>gi|225872746|ref|YP_002754203.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225794526|gb|ACO34616.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 708

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 88/254 (34%), Gaps = 26/254 (10%)

Query: 137 NIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             + +  + + + P ++     +  LYF++ RI D   A   A + +  +PD     + +
Sbjct: 85  KASQQYHQALAEDPDSKYLKSHLAELYFQTGRIKDAIVA---AQEEVKSNPDDLEAHKLL 141

Query: 195 VQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAIL------LIARSLENADKGDMI 243
            Q Y+       ++   A   LN       E+ +  A+        I      A    M 
Sbjct: 142 AQIYLQSISNDQQDNQMAQQMLNLAI---GEYQKITALEPGKIPDHIMLGRLYAANHQMD 198

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIY 299
            +  +  ++ ++  +S    +  A+    Q    KA   L+ +   +  P     +   Y
Sbjct: 199 KAEAEFQKAYQIDPSSEETILSVARFYSEQGDNAKAIATLKSVTAADQTPRIEYALGLSY 258

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L        +    R  +++ ++ E    ++K        DQA       +   P   
Sbjct: 259 DQLK--EPTKAIAAYQRALQLDPDNPEIEKPLAKDLFAAHQFDQALQVYQDLVSSEPNNG 316

Query: 360 -IFLLLAQIEQANS 372
             +L ++ IE+ + 
Sbjct: 317 KAYLRISDIERHDG 330



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 12/180 (6%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A+    KA  I P +     +V + Y    + ++AI  L       +      A+ L 
Sbjct: 198 DKAEAEFQKAYQIDPSSEETILSVARFYSEQGDNAKAIATLKSVTAADQTPRIEYALGLS 257

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
              L+  +    IA+Y  A++   L  ++       AK L + ++  +A  + + +    
Sbjct: 258 YDQLK--EPTKAIAAYQRALQ---LDPDNPEIEKPLAKDLFAAHQFDQALQVYQDLVSSE 312

Query: 291 PHPEIANIYTHLLSENTVG-KLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             P     Y  +        + ++A    ++ + I  +SVE       +A  +G  ++A 
Sbjct: 313 --PNNGKAYLRISDIERHDGRFQQAYDNLMKAKAITPDSVEIAYDQGLLADALGHFEEAE 370



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 97/284 (34%), Gaps = 36/284 (12%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L   +    +     A   L+ +     T     Y+L     ++ +   A     +AL
Sbjct: 217 TILSVARFYSEQGDNAKAIATLKSVTAADQTPRI-EYALGLSYDQLKEPTKAIAAYQRAL 275

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + PD P + + + +    A ++ +A+         + E N  +A L I+    +   G 
Sbjct: 276 QLDPDNPEIEKPLAKDLFAAHQFDQALQVYQD--LVSSEPNNGKAYLRISDIERH--DGR 331

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------- 294
              +Y + +++  +  +S+  +        +     +AE I +K+  ++ HP        
Sbjct: 332 FQQAYDNLMKAKAITPDSVEIAYDQGLLADALGHFEEAEGIFKKLVAISDHPSNIYSPDE 391

Query: 295 ----------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE----MGS 340
                     +A++Y      +    +    ++  +  +  E      +  ++       
Sbjct: 392 KSDRYLFLDRLASVYREQNKVDQA--IAVYEKMALLGHDYAERAY---QSEVDTYGSAHQ 446

Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQ 383
             +A   A  A++  P  + + LLLA        +  K+    +
Sbjct: 447 YAKAEGAAQEAVQKMPNDQAMKLLLA----GEMADNGKVQDALK 486


>gi|254521591|ref|ZP_05133646.1| porphyrin biosynthesis protein [Stenotrophomonas sp. SKA14]
 gi|219719182|gb|EED37707.1| porphyrin biosynthesis protein [Stenotrophomonas sp. SKA14]
          Length = 431

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 129/394 (32%), Gaps = 20/394 (5%)

Query: 4   LIRYFFVISLVICSFIIVS----HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           L+     +++ + +   +     +   +V + +G   Y ++   +  +    +    LL+
Sbjct: 7   LVVLLLAVAIGVVAAQWLGADDLNRFGEVILRYGGYDYHSNLPKVALLAVIAVLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           ++                +    +G   L  GL +        A K+    ++       
Sbjct: 67  SLIAAPF-------RAWGRYRRKQGRVRLIDGLQAYEHGQWQRAEKLLDGAAKDPEVSAV 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178
            L     V+ A A          L+ + +  AT +  + +    +  +  D  +A   A 
Sbjct: 120 ALAN--AVRSAQARADGPAGEALLQRLGESDATLQALLRAEQLLARELPVDAINALDVAA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
               + P   W+    + Q   A E    +  L Q K    + +      L A++L  A 
Sbjct: 178 -IQPLPPRGLWLRTEALAQAGRAHEAYGQLGALRQSKVLPTDASSELEARLAAQALLEAA 236

Query: 239 KGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             + +A+  +A  ++L+   + + A    A   ++ N    A + LE+        E+  
Sbjct: 237 DVNALAAQWEATPKALRPTPDVVGAYASRA---VALNWDEPALLALEQALDQRWDDELVA 293

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +Y  L +E    +     R   ++  S    +   ++AL     D A A    A+     
Sbjct: 294 LYGRLPAERLATRQANLQRWGNVHDGSAALRLAQGRVALAQQQWDAADAFLHEAIASGAG 353

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +  L ++  A             +AL     
Sbjct: 354 APAWEALGEL-FAQRGEHALAAQCLANALRLQRG 386


>gi|320103772|ref|YP_004179363.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319751054|gb|ADV62814.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 1585

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 93/294 (31%), Gaps = 18/294 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA- 156
             I   +++              L      + +L   +   A  KL+ +       +   
Sbjct: 205 GGIRTVKRLVFAERAAKKDLRNPLFLKEGARASLLLGRREQAEAKLKQLTPDQGPEKNGE 264

Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPW---VTEAVVQQYVLAKEWSRAITF 210
              +  +   +       + +  A  A  + PD         A+++  +  + +   I  
Sbjct: 265 AAYLMGICR-ALTKNTEEAQRLLAQ-AYRLQPDLIEAYAAHAALLRGQMSDEAFHSPIER 322

Query: 211 --LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +  +     N  RA   + R+    D   + A   D  ++ +L  N        A 
Sbjct: 323 RPLEEVLERVIRANPGRAQAYLVRASFGVDAAQIAA---DLRKAAQLAPNDPEVVFALAA 379

Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALRLEEINKESV 325
            L  + +  +A   +  ++   P HP ++   T LL    +T   +    R  +   + V
Sbjct: 380 LLQREGRTEEAIERVRPVFDAQPDHPVLSRALTGLLLSRGDTDEAVAVFRRHLDAAPDLV 439

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKI 378
           E  + + ++ L +  +D+         +          L AQ+  A     + I
Sbjct: 440 EDRLAMGELLLGLERLDEVRTLLEQWPESKLLAARKSFLQAQLLVAERKFGEAI 493



 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 68/227 (29%), Gaps = 26/227 (11%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A        A +        P         L     R G    A        D  PD P
Sbjct: 353 AAQIAADLRKAAQL---APNDPEVVFA----LAALLQREGRTEEAIERVRPVFDAQPDHP 405

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            ++ A+    +   +   A+    +    A +      + +    L      ++      
Sbjct: 406 VLSRALTGLLLSRGDTDEAVAVFRRHLDAAPDL-VEDRLAMGELLLGLERLDEVRTLLEQ 464

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             ES  L       S   A+ L+++ K  +A  +LE             +   L ++  V
Sbjct: 465 WPESKLLAAR---KSFLQAQLLVAERKFGEAIDLLET-----------QVLPELSNDKPV 510

Query: 309 GKLKRALRLEEINK--ESVESLVIVSKIALEMG-SIDQAHAKAMLAM 352
             ++ A  L   ++     E  +   + A+ +    D A A+  LA+
Sbjct: 511 A-MRAAQLLASCHEALGHPEDQLKALRQAIALNPEADSARAQLGLAL 556



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 9/160 (5%)

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQN---------KKRKAEVILEKIWKVNP 291
           +   +     ++ +L  + I A    A  L  Q          ++R  E +LE++ + NP
Sbjct: 278 NTEEAQRLLAQAYRLQPDLIEAYAAHAALLRGQMSDEAFHSPIERRPLEEVLERVIRANP 337

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
               A +       +         +  ++     E +  ++ +    G  ++A  +    
Sbjct: 338 GRAQAYLVRASFGVDAAQIAADLRKAAQLAPNDPEVVFALAALLQREGRTEEAIERVRPV 397

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               P   +          +  +TD+ +   +  L A PD
Sbjct: 398 FDAQPDHPVLSRALTGLLLSRGDTDEAVAVFRRHLDAAPD 437


>gi|312968146|ref|ZP_07782356.1| cellulose synthase operon protein C [Escherichia coli 2362-75]
 gi|312286971|gb|EFR14881.1| cellulose synthase operon protein C [Escherichia coli 2362-75]
          Length = 1026

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 221 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 278

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 279 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 338

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 339 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 398

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 399 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 455

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 456 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLAR-EPTNADAI 509

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 510 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 561



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 453 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLAREPTNADAILGL 512

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 513 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 572

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 573 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 607


>gi|307173081|gb|EFN64211.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Camponotus floridanus]
          Length = 1092

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 45/314 (14%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 146 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 203

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       G++  A  +  K
Sbjct: 204 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 255

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 256 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 311

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE---- 294
           G +  +      +++L  N   A    A +L  + +  +AE       ++ P H +    
Sbjct: 312 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNN 371

Query: 295 IANIYTHLLSENTVGKLKR-------ALRLEEIN----KESVESLVIVSKIALEMGSIDQ 343
           +   Y       +   +KR       A RL         E   +   ++ +  + G +++
Sbjct: 372 LVQTYAV-----STANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNE 426

Query: 344 AHAKAMLAMKIAPR 357
           A      A++I P 
Sbjct: 427 ALMHYKEAIRIQPT 440



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 85/230 (36%), Gaps = 11/230 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 281 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 340

Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                 +   A    N   +    +A   N       ++ +    ++G +  +    +++
Sbjct: 341 ALKEKGQVVEAEECYNTALRLCPTHADSLNNLVQTYAVSTANIKREQGYIEEATRLYLKA 400

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENT 307
           L++      A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++ 
Sbjct: 401 LEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDI 458

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            G L+   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 459 QGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 508



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 55/180 (30%), Gaps = 12/180 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLL------EVQIALAERQYNIAHEKL-EMMLQIP 150
             +  A + ++   +    H + L  L+         I   +     A     + +   P
Sbjct: 346 GQVVEAEECYNTALRLCPTHADSLNNLVQTYAVSTANIKREQGYIEEATRLYLKALEVFP 405

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A  +L     + G LN A  +  +A+ I P        +       ++   A+  
Sbjct: 406 EF-AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQC 464

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +  +    +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 465 YTRAIQINPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 520


>gi|284050200|ref|ZP_06380410.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
 gi|291569007|dbj|BAI91279.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 596

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 79/235 (33%), Gaps = 21/235 (8%)

Query: 133 ERQYNIAHEKLE-MMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +   A    +  +   P             ++ +  R  D   A      A+ + P+ 
Sbjct: 69  AGRLEEAIGAYQQAIKLNPEDSWSYNSLG--GIFIKLERWED---AVPVCQHAIQLDPNF 123

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W    + Q     ++W  A +   +  +    +           +L   ++     +  
Sbjct: 124 FWAYNNLGQALSQQEQWEDAASVYQKASQINSTF--FWTYNNWGEALIQLERW--SEAVT 179

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302
              +++++  N   A      +L    +  +A  + +K  ++NP     H  +A+   +L
Sbjct: 180 VYQKAIEIDPNFCWAYNHLGDALRHLKRWSEAVPVYQKAAEINPNFFWTHSNLADTLVYL 239

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +    +       ++N  S ++   ++K   ++  ID+A A     +++ P 
Sbjct: 240 KRFDQAIPV--YQSAIKLNANSPQTYYKLAKCLQKVKRIDEAIASFQKVLELKPD 292


>gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
 gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
          Length = 977

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 83/258 (32%), Gaps = 18/258 (6%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           KM   +  +    +  L  L +VQ      +   A       +++  +   A  +L    
Sbjct: 162 KMAIMLDPRLVDAHSNLGNLYKVQ-----GRLVDAKHCYAQAIRVKPSFAIAWSNLAGLL 216

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G L++A  +  +A+ ++PD       +      +     AI       +    +   
Sbjct: 217 KDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNF--- 273

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            AI     +    D G M  + H    +++L  N   A      +L       +A     
Sbjct: 274 -AIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVTCYR 332

Query: 285 KIWKVNP-HPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
              ++ P HP   + Y +L +           L        +  +   +   +  +  E 
Sbjct: 333 TALQLKPDHP---HAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQ 389

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G +DQA A    A+ I P
Sbjct: 390 GKLDQALAHYQQAITIDP 407



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 59/195 (30%), Gaps = 11/195 (5%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A      A+ + P        +   Y +      A     Q  +    +    AI
Sbjct: 152 GQTEEAVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLVDAKHCYAQAIRVKPSF----AI 207

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                +    D G + A+     E+++L  +   A      +L    +  +A    +   
Sbjct: 208 AWSNLAGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSAL 267

Query: 288 KVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           ++ P     H  +A+ Y           +       ++     ++   +     E G ++
Sbjct: 268 QIRPNFAIAHGNLASCYYDAGQMELA--IHTFRHAIQLEPNFPDAYNNLGNALRECGHLE 325

Query: 343 QAHAKAMLAMKIAPR 357
           QA      A+++ P 
Sbjct: 326 QAVTCYRTALQLKPD 340


>gi|229102222|ref|ZP_04232931.1| hypothetical protein bcere0019_13830 [Bacillus cereus Rock3-28]
 gi|228681123|gb|EEL35291.1| hypothetical protein bcere0019_13830 [Bacillus cereus Rock3-28]
          Length = 434

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 33/268 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKELMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEGQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + ++   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELAVPFYVELASIAAKLGKVAEAEEVL 308

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340
           +K                L   +    LK A  L+   K   E L+ V + A++ G    
Sbjct: 309 QKA-------------LELDPGHLGAILKYAYILKGQEK--YEELITVVERAIDSGEPDT 353

Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362
               D A AK  L M        +  + 
Sbjct: 354 QLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|115716503|ref|XP_001201557.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
            containing 3 [Strongylocentrotus purpuratus]
 gi|115772610|ref|XP_788963.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
            containing 3 [Strongylocentrotus purpuratus]
          Length = 1258

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 6/172 (3%)

Query: 127  VQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             QI + + Q++ A    +   Q  P T +  +Y+L   + +      A R+  +AL+I P
Sbjct: 906  AQIMVKKDQFDEAESLYQKATQLEPPTPDL-LYNLAIIAIQKEQETKAHRHFDEALEIDP 964

Query: 186  DAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                ++      Y+     + A   +  ++ K   E +     L    +L   D  D  A
Sbjct: 965  QHR-ISLFRSALYIHESG-NAARRTIAIKRLKKLLEIDPPSVQLYSTLALIFMDDEDTSA 1022

Query: 245  SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
            + H   ++L++  +   A    AK    + +  +A+  LE + K +P H EI
Sbjct: 1023 ALHYYQKALEIRPSDYQALFNTAKIHFEEERPLRAKAYLETLLKHHPNHTEI 1074


>gi|302344317|ref|YP_003808846.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
 gi|301640930|gb|ADK86252.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
          Length = 412

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 85/264 (32%), Gaps = 16/264 (6%)

Query: 104 RKMHSYVSQQHTFHNEY-LVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSL 160
           R +   +S++    +E  L ++   + A   ++   A E     L+     T   A+  L
Sbjct: 122 RVVDEMLSKRIDPQHEQFLAHMEAARQAERRKKSAEAIEAYRQALELFEDETAMMALARL 181

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                R GD + A +     L  +PDA      +   Y        A+  +      A+ 
Sbjct: 182 LR---RAGDEDGATKLLFATLRANPDALKAYLELAMIYRGQSRLEDALKVMQAALGAAER 238

Query: 221 WNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                  +A L             +  +      ++    + +  +     +L  Q    
Sbjct: 239 LKHGGLTKASLYYYMGEIELQLKHLQKALGHFDLAMGELPDDVEMASNIGDALAGQGHYA 298

Query: 278 KAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           ++E   +K  +++  P +A++Y      H         L    +    +      L  ++
Sbjct: 299 ESEQYYQKALELD--PSLAHVYNRLGIAHRRQGKHDMALNLYRKALAFHPNDEHLLYNMA 356

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
           ++  E+     A      A++I P
Sbjct: 357 RVHWELAEYQLASEVLTKALEINP 380


>gi|196033346|ref|ZP_03100758.1| TPR domain protein [Bacillus cereus W]
 gi|195993780|gb|EDX57736.1| TPR domain protein [Bacillus cereus W]
          Length = 420

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 86/278 (30%), Gaps = 53/278 (19%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            K  +AE +L+K                L   +    LK A  L+E  K   E L+ V +
Sbjct: 285 GKIAEAEEVLQKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVE 329

Query: 334 IALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
            A++ G        D A AK  L M        +  + 
Sbjct: 330 RAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|149924911|ref|ZP_01913243.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
 gi|149814221|gb|EDM73832.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
          Length = 735

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 36/107 (33%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   + A A  +   A      +L+       A+  L+  +   GD   A  YA +A+ 
Sbjct: 625 LLRSARRAYASGRRKAAERLYTQVLRDHPRDLDALVGLHRINFDSGDYQDALDYAERAVK 684

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           I P    +        +  +++  A T   Q         R R  LL
Sbjct: 685 IRPRQGRLRIFAGDACMKVRDYGCARTHYEQAAALNHARARQRLELL 731


>gi|162451193|ref|YP_001613560.1| TPR repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161161775|emb|CAN93080.1| tetratricopeptide repeat protein [Sorangium cellulosum 'So ce 56']
          Length = 2081

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 25/206 (12%)

Query: 178  TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             +ALD+ P    +   ++Q Y    +W R +  L +  +   + +R    L     +   
Sbjct: 1563 EEALDLEPQNHVLLHKLLQLYQRTGQWERMVDCLQRIAELEPQPDRKSRYLYTMAQIYRD 1622

Query: 238  DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP---- 293
               D   +     ++L L  +S+ A     K L +Q + ++    LE+ ++   H     
Sbjct: 1623 KLDDPARAVELFNDTLDLNPHSLEAFERINKILTAQKEWKQ----LERAYRKMLHRVAGK 1678

Query: 294  -----------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                        +  IY   L + T   ++       +  E     +I++++  +    D
Sbjct: 1679 GNTDLEYSLWHALGLIYRDRLGDRTAA-VETFRMASRLKPEDATEHLILAELYEQSEQFD 1737

Query: 343  QAHAKAM-----LAMKIAPRKEIFLL 363
             A  +         MKI P K ++ L
Sbjct: 1738 LATGEFQAMVKIDPMKIDPYKRLYRL 1763



 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 90/240 (37%), Gaps = 25/240 (10%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            DL++A+    + ++I P      EA+ + Y   ++W   I   ++    A++  +   + 
Sbjct: 1122 DLSAARL--EQVVEIDPSHEPALEALERCYRRLRQWHDLINTYDRHINAAEDRQKKIELW 1179

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                 +   +  D+  +    +  + + D  I A    AK    Q+   KA   +E + +
Sbjct: 1180 SHTAKVYAEEIEDLDRAIDAYLNIVDIQDTHIPALEALAKLYEKQDNSAKA---IEYMTR 1236

Query: 289  VNPHPEIA-------NIYTHL---LSENTVGKLK---RALRLEEINKESVESLVIVSKIA 335
            V    ++         +Y  +   L E    +++   R     +++   V +L  +  IA
Sbjct: 1237 VA---DLTADGKQRVEMYFRIGRQLDEKLGERVQAQERFEMALDLDPSHVPTLAALRVIA 1293

Query: 336  LEMGSIDQAHAKA--MLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWTQSALHAMPD 391
            ++    D+A            APR +  LL  L ++           +   + AL + PD
Sbjct: 1294 IDAADWDRAARYLDQEQMNTDAPRAKARLLVELGKLRDDMLGEHALAVQAYEMALQSDPD 1353



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 80/233 (34%), Gaps = 18/233 (7%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           +  + R+ D+  A     + LD+  + P    A+   Y    +WS     L +    A +
Sbjct: 533 HLLADRLNDVQGAVETWKRVLDLRGEDPEALGALSNLYERVGQWSELCDVLERHYDIAID 592

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR--- 277
                A+LL    L +   G   +S  D    L +   ++ A    A     +N+     
Sbjct: 593 DESRVAVLLRRAKLFHEQLGRDDSSLDDYQRVLDIDYANLEALYAIAAIWRLRNEPEQIV 652

Query: 278 --------KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
                   +A  +L     +  + E+   Y H+L +     +    +L E++ +  E  +
Sbjct: 653 SSLHQTVDRARDVLPAENVIALYRELGTTYQHVLGQ-AYDAIDAWRKLLEVDPKDFE-AM 710

Query: 330 IVSKIALEMGSI-----DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
              +  L          D    +A      A +   +L +AQI +      D+
Sbjct: 711 AALENLLRAEGRWVEVVDVKMGRAAAYESPADKVREYLEVAQIWEHQVEEKDR 763


>gi|160890825|ref|ZP_02071828.1| hypothetical protein BACUNI_03270 [Bacteroides uniformis ATCC 8492]
 gi|317479742|ref|ZP_07938864.1| tetratricopeptide [Bacteroides sp. 4_1_36]
 gi|156859824|gb|EDO53255.1| hypothetical protein BACUNI_03270 [Bacteroides uniformis ATCC 8492]
 gi|316904112|gb|EFV25944.1| tetratricopeptide [Bacteroides sp. 4_1_36]
          Length = 319

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 10/272 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+ +        A K  +          E + YL   Q+     + + AH+ LE M +I
Sbjct: 33  DGMRAQRMGRTDYAIKCFTEALA-IQEDFETMGYL--AQVYTQTSELDEAHKLLERMTEI 89

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                    SL        D  +    A KA++I          + +      +    I 
Sbjct: 90  EPEHISTYLSLANVCYMQEDYPAMAGAAKKAIEIEEGNAMAHYLLGKADNGQGDGIMCIA 149

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +      ++   R    + R+           +  D    L        A +   K 
Sbjct: 150 HLTKAIVLKDDFIEAR----LLRAEALVQMQQYKEAMEDIDTILAQDPEDESAILLRGKI 205

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVE 326
             +   K KAE   +K+ ++NP  E A +Y    ++        ++      E+N    E
Sbjct: 206 EEATGDKEKAESSYQKVTELNPFNEQAFLYLGQLYITQNKLAEAIELFTEATELNPNFAE 265

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +     +  L  G  + +       +++ P++
Sbjct: 266 AYHERGRAKLLNGDKEGSAEDMKKGLELNPKE 297


>gi|148237608|ref|NP_001088513.1| interferon-induced protein with tetratricopeptide repeats 1
           [Xenopus laevis]
 gi|54311460|gb|AAH84851.1| LOC495383 protein [Xenopus laevis]
          Length = 462

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 20/200 (10%)

Query: 171 NSAQRYATKALDISPDAPWVTE--AVVQQYVLAKEWS-------RAITFLNQKKKNAKEW 221
             A+ +  KAL++ P  P +    A V   +  ++           +  L +     +  
Sbjct: 156 ERAKEWFEKALELDPHNPELNSGYATVMYRLENQDNRFYANNNCECLELLKRAVTLNEND 215

Query: 222 NRNRAILLI-ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +  +A+L +    L   ++G+ I    +A+       + I     AAK    + K   A 
Sbjct: 216 SVIKALLALKYHYLGRGEEGETI--MEEALRQTPDSPDLI---RHAAKFYRREGKIDYAI 270

Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            IL+K  +  P     H EI   Y   ++           ++ +  K  V++ + ++K+ 
Sbjct: 271 TILKKALEKTPTSCHLHYEIGLCYEQKMNMFVSLATSHFEKVLQYKKRFVDAYIHLAKMY 330

Query: 336 LEMGSIDQAHAKAMLAMKIA 355
           ++     +A       + + 
Sbjct: 331 VKQNQFKKAEDTFQKGLNLE 350


>gi|300692627|ref|YP_003753622.1| hypothetical protein RPSI07_3009 [Ralstonia solanacearum PSI07]
 gi|299079687|emb|CBJ52364.2| conserved exported protein of unknown function (TPR-like)
           [Ralstonia solanacearum PSI07]
          Length = 641

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 22/215 (10%)

Query: 191 TEAVVQQY---VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            EA++Q       + + + A++ L +   +  +  R    L +AR+   A   D   +  
Sbjct: 192 AEAILQLQQQMSKSNDPAGAVSALQRLTVH--DMQRPETHLALARAKVVAK--DNAGALS 247

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302
           +   +LKL      A+I AA+ L + N    A   L    K  P     H  +A +Y  +
Sbjct: 248 ELDTALKLRPGYEDAAILAAE-LRADNNPDAAIAGLRTFLKAAPASIDGHLALARMYL-V 305

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-- 360
            ++N   + +    L +I        + +  + L+    D A       +  A +     
Sbjct: 306 SNQNDQARAE-FEALRKIAPNDPRIPLALGLLNLQQRQYDAAERYLKEYVAQAAKSPSLS 364

Query: 361 ----FLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               +  LAQ+ +    +    + W      A   
Sbjct: 365 PEPGYQGLAQVAE-ERRDYAGAIAWLDKIAGASNG 398



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 53/142 (37%), Gaps = 5/142 (3%)

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +   A   ++L   S+ A       +++  +  + E +L+         + A     
Sbjct: 138 PAQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 197

Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           L      S +  G +    RL   + +  E+ + +++  +       A ++   A+K+ P
Sbjct: 198 LQQQMSKSNDPAGAVSALQRLTVHDMQRPETHLALARAKVVAKDNAGALSELDTALKLRP 257

Query: 357 RKEIFLLLAQIEQANSHNTDKI 378
             E   +LA   +A+++    I
Sbjct: 258 GYEDAAILAAELRADNNPDAAI 279


>gi|303316892|ref|XP_003068448.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240108129|gb|EER26303.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 727

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 16/166 (9%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------E 192
           A   L    Q P          Y +    GD   A ++  +AL + PD+          +
Sbjct: 415 AMSLLRENSQDPDALFLRGRLFYLQ----GDNEQAIKHFKRALSLDPDSTETVKYLRMVQ 470

Query: 193 AVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            +++          A+ +  AI       +         + LL  R+  + +  +   + 
Sbjct: 471 KLLRHKDEGNAAFKARRYREAIKLYTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAI 530

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            D  ++L+L      A    AK+        KA   L+ I + NPH
Sbjct: 531 EDCTKALELDPTYSKAKRVRAKAYGGTGDWEKALNELKSIAESNPH 576


>gi|85858278|ref|YP_460480.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85721369|gb|ABC76312.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
          Length = 649

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 63/202 (31%), Gaps = 14/202 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           LY  + +    + A + A   L +SP             +  K+ + A+  L   ++   
Sbjct: 119 LYLAARQ---PDKALKKAETVLQLSPGNEDALLLKAAALIALKDSADALAILRDMRQRG- 174

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                R  L +  +  +     +  +       +     +++  +  A       K  +A
Sbjct: 175 ---VKRPELFLLLASSHLQNNSIKEAQDALNTGIADNPKAVILYLTLADLYTRDKKIDEA 231

Query: 280 EVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
              L+K+  + P        +A +Y H+   +    +     +      + E  + V   
Sbjct: 232 AATLQKVIALEPKNSRYRLTLAGLYWHVGQNDKA--VATLQEVVAAEPANEEGRLQVGGF 289

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
            +  G    A  +    ++  P
Sbjct: 290 YIARGRFADAERELKAGIQAIP 311



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 70/218 (32%), Gaps = 19/218 (8%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +  LY+    +G  + A     + +   P        V   Y+    ++ A   L   
Sbjct: 250 LTLAGLYWH---VGQNDKAVATLQEVVAAEPANEEGRLQVGGFYIARGRFADAERELKAG 306

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-----AAKS 269
            +   +  + R     A S    + G    +     E L L  ++    I       A+ 
Sbjct: 307 IQAIPKSFKLR----FALSDLYLNTGMPDRAISLLNECLALEKDAGNPQILQTKNALARI 362

Query: 270 LISQNKKRKAEVILEKIWKVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
            +++ + ++A   ++++ K N      H         LL  +  G +     +     + 
Sbjct: 363 HLARQEVKEASRYVDEVIKENSKDVDAH--FTKGNIALLKRDGAGAVAEFRTVTSERPQL 420

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +   + +++  +     + A      A+K  PR    L
Sbjct: 421 IPGHIRLAEAHMLNKEYNLASDTLEKALKANPRSAPLL 458



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 14/213 (6%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MML 147
             G +++   +   A      V+ +        + L   +  +  ++YN+A + LE  + 
Sbjct: 392 TKGNIALLKRDGAGAVAEFRTVTSERPQLIPGHIRL--AEAHMLNKEYNLASDTLEKALK 449

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE---- 203
             P +       L     +     SA     + +  +P   +      Q Y    +    
Sbjct: 450 ANPRSAPLLSAPLVQVYMKQKKYESALALLEERIQQNPGDAFALNLRGQVYNAQGDELKA 509

Query: 204 ---WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNS 259
              + +A+    +  +   E       L    S   +  GD+  +   A ++  +  +N 
Sbjct: 510 AESYRQAMAVYEKVLQKQPENWVAANDLAFLLSEYGSKPGDLDRALALARKAYGRNAEN- 568

Query: 260 IMASI-CAAKSLISQNKKRKAEVILEKIWKVNP 291
             A +         +   R+AE ++ K     P
Sbjct: 569 -PAVLDTLGWIYYKKGDYRQAEALIVKAINKAP 600


>gi|332184481|gb|AEE26735.1| hypothetical protein FN3523_1432 [Francisella cf. novicida 3523]
          Length = 385

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 84/266 (31%), Gaps = 33/266 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+++ +    ++L     I  ++Y   + +   ++  + +    + I +  LF  +L   
Sbjct: 1   MIKVFKLIIAVALATLVGIWATNYHGYIMLVLADKTIKMNLVAFVFIAFILLFILVLCIR 60

Query: 61  VSRFFLSCPAMLFHM----LHKRNYDKGYKALYTGLMSIAAHNIPLARKM---HSYVSQQ 113
           + R     P +LF           +++    +      I   N  L +K    H      
Sbjct: 61  IVRSAFKFPYLLFSWVIGLFSVDKHERFTDLVAD----ITLENNRLVKKFSIGHIMRLTP 116

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSLYF-ESCRIGDLN 171
               +  L   L V  A   +      + L+ +     T + F VY LY  +        
Sbjct: 117 RHLKDYILFRKLNVIAA--TKDIKELEKALKHIDSKTITYKFFEVYKLYLVQKLSEAQTK 174

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A           P+   +        +   + + A+  L +                 A
Sbjct: 175 IAVMLEKNDPRFMPNIVNLAG---DIALADGDDTFALKILEK---------------YDA 216

Query: 232 RSLENADKGDMIASYHDAIESLKLCD 257
              E+ ++  +I +   A ++ KL D
Sbjct: 217 YLKEDLEENLIILALTAAKDANKLAD 242


>gi|326433006|gb|EGD78576.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 828

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 94/341 (27%), Gaps = 73/341 (21%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPAT 152
           ++AA     AR+ H   +         +V            +++ A    E  +L    T
Sbjct: 254 AVAAVEAMRARREHKTEAFAQLCGQVGVVL-------NTFGEHDQAIAYYETALLIYRRT 306

Query: 153 REFAVYS---------LYFESCRIGDLNSAQRYATKALDIS--------PDAPWVTEAVV 195
                           L     R G  + A ++  KAL I         P        + 
Sbjct: 307 E--GKKGENVATLHNNLGIACRRKGAYDKAIQHYKKALAIRVEVLGEKHPTTAETHNNLG 364

Query: 196 QQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           + +    ++  AI   ++      +   + + N  +      +    KG+   +     +
Sbjct: 365 ELHRHKGDYDSAIECYSRANEVFVETLGDKDSNTGMTYGNLGIAYLSKGEYDKAIEFIEK 424

Query: 252 SLKLCDNSI----MASICAAK----SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           +L +    +      +         + + +    KA    EK            IY    
Sbjct: 425 ALAIMVEILGDKHPNTAMTLGNLGIAYLEKGDHDKATDQFEKA---------LAIYLEAF 475

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--------KIA 355
            +               +  + ++   +  + +E    D+A      A+        +  
Sbjct: 476 GD--------------KHPATADTYTNLGNVYVEQRDFDRAVEYLEKALAIRVEAFGENH 521

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL---HAMPDPL 393
           P   + L    +   +  + ++   + + AL    A   P 
Sbjct: 522 PSTAMALENIGLLHGDRGDKEQASAYVERALGVFEATLGPD 562


>gi|229115066|ref|ZP_04244476.1| hypothetical protein bcere0017_13610 [Bacillus cereus Rock1-3]
 gi|228668206|gb|EEL23638.1| hypothetical protein bcere0017_13610 [Bacillus cereus Rock1-3]
          Length = 420

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 33/268 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 121 QKLLKAKELMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + ++   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELAVPFYVELASIAAKLGKVAEAEEVL 294

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340
           +K                L   +    LK A  L+   K   E L+ V + A++ G    
Sbjct: 295 QKA-------------LELDPGHLGAILKYAYILKGQEK--YEELITVVERAIDSGEPDT 339

Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362
               D A AK  L M        +  + 
Sbjct: 340 QLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|300117453|ref|ZP_07055243.1| TPR domain protein [Bacillus cereus SJ1]
 gi|298725288|gb|EFI65940.1| TPR domain protein [Bacillus cereus SJ1]
          Length = 420

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 90/281 (32%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A+AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAYAKKQLEMYSDALKHYESAYT 367


>gi|165923888|ref|ZP_02219720.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 334]
 gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 334]
          Length = 561

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 76/261 (29%), Gaps = 41/261 (15%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A E    +L+    +  A++       ++   + A  Y  +AL + P       
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLCRNDEALHYIDRALLLEPQNATFQN 74

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +         +   A    +Q  +   ++    A      +     +     +     ++
Sbjct: 75  SRGNILSQHGKLVEATIAYDQAIQLQPDY----ATAYNNIANCFFRQKKFDNAKKAYQKA 130

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIY-------- 299
           + L  +   A    A+ LI      +A   L++   ++ H      ++A++Y        
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSK 190

Query: 300 --------THLLSENTVGK----------------LKRALRLEEINKESVESLVIVSKIA 335
                     L  EN   +                +        +N E  +    ++   
Sbjct: 191 AITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY 250

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
           L+ G   +A    +  ++  P
Sbjct: 251 LQRGDHKEALIHYLRQLEKKP 271


>gi|42780720|ref|NP_977967.1| TPR domain-containing protein [Bacillus cereus ATCC 10987]
 gi|47565981|ref|ZP_00237019.1| TPR domain protein [Bacillus cereus G9241]
 gi|52143829|ref|YP_082999.1| TPR repeat-containing protein [Bacillus cereus E33L]
 gi|222095248|ref|YP_002529308.1| tpr-repeat-containing protein [Bacillus cereus Q1]
 gi|42736640|gb|AAS40575.1| TPR domain protein [Bacillus cereus ATCC 10987]
 gi|47556898|gb|EAL15228.1| TPR domain protein [Bacillus cereus G9241]
 gi|51977298|gb|AAU18848.1| TPR-repeat-containing protein [Bacillus cereus E33L]
 gi|221239306|gb|ACM12016.1| TPR-repeat-containing protein [Bacillus cereus Q1]
 gi|324325635|gb|ADY20895.1| TPR-repeat-containing protein [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 420

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    E +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|302343194|ref|YP_003807723.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus
           baarsii DSM 2075]
 gi|301639807|gb|ADK85129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus
           baarsii DSM 2075]
          Length = 467

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 26/280 (9%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +G +AL   L ++   +   A K  +     +      +     V    +      A   
Sbjct: 161 RGRRALMAALENLVVGDFESAEKNITEARGYNPHDEATMFMQSIVDGVNSGGLRKEAAVT 220

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                              F +   GD+  A++   KA    P                 
Sbjct: 221 F---------------GDGFLAMLEGDVAQAEKLFGKAAADDPRLWQARLFEANMMAGQG 265

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
              +A   L        +     A   ++ ++ +  +G M     +   +LK   N   A
Sbjct: 266 RGDQARALLEALVAQKPDV----AEAHLSLAMMSMGEGKMGQGKQELERALKANPNMAQA 321

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRL 317
                +  + +    +AE   +     +P     + ++  IY HL             + 
Sbjct: 322 LYQMGQVAVYEGDAGRAEGYFKAAIAADPYYEEAYNDLGLIYAHL--GRVADAEASFNKA 379

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            E N     + + +  +       ++A  +   A+ I P 
Sbjct: 380 LEFNPTFFPAHIGLGNLYGRERQFNKAVDEFNKALTIDPT 419



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 16/179 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146
           L   +MS+      + +             N         Q+A+ E     A    +  +
Sbjct: 289 LSLAMMSM--GEGKMGQGKQELERALKANPNMAQALYQMGQVAVYEGDAGRAEGYFKAAI 346

Query: 147 LQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
              P   E      +  +Y    R+ D  ++     KAL+ +P        +   Y   +
Sbjct: 347 AADPYYEEAYNDLGL--IYAHLGRVADAEAS---FNKALEFNPTFFPAHIGLGNLYGRER 401

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           ++++A+   N+       +    A      +L          +   A ++  L  +   
Sbjct: 402 QFNKAVDEFNKALTIDPTF----APAYYNAALAYVAMDMWADAIRYADKAASLGMDIPP 456



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 59/193 (30%), Gaps = 10/193 (5%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           M         AR +   +  Q    +    +L    +++ E +     ++LE  L+    
Sbjct: 260 MMAGQGRGDQARALLEALVAQK--PDVAEAHLSLAMMSMGEGKMGQGKQELERALKANPN 317

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A+Y +   +   GD   A+ Y   A+   P        +   Y      + A    N
Sbjct: 318 MAQALYQMGQVAVYEGDAGRAEGYFKAAIAADPYYEEAYNDLGLIYAHLGRVADAEASFN 377

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  +    +      L      E         +  +  ++L +      A   AA + ++
Sbjct: 378 KALEFNPTFFPAHIGLGNLYGRERQFN----KAVDEFNKALTIDPTFAPAYYNAALAYVA 433

Query: 273 ----QNKKRKAEV 281
                +  R A+ 
Sbjct: 434 MDMWADAIRYADK 446


>gi|149178802|ref|ZP_01857383.1| TPR repeat [Planctomyces maris DSM 8797]
 gi|148842343|gb|EDL56725.1| TPR repeat [Planctomyces maris DSM 8797]
          Length = 591

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 91/244 (37%), Gaps = 7/244 (2%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +E  V L          + + A    + +L   A +  A Y L     + GDL+ + R  
Sbjct: 2   DEVQVQLKAALAHHQAGELDQAATIYQHVLDTNARQWEARYYLGTLQLQRGDLDQSIRTF 61

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            + + + P+ P V   +   Y  A +W  A     Q  +    + R              
Sbjct: 62  LQVVQLQPELPDVHNNLGVAYHAAGKWQEAGQSFEQAIRLNPHYER----AYFNLGSLFE 117

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIA 296
            +G    +     ++  L   ++      A +L S  +  +AE I  ++    P   +++
Sbjct: 118 SRGVFSEAVKCYQKAHDLSPGNLDTHQKLADALKSAGEWARAEDIYRELLVAKPGDFDLS 177

Query: 297 --NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               Y  +L       +     + +I+ +  + LV +S +   +G+ID A   A  ++++
Sbjct: 178 MKLAYVLVLQRQYQEAIMLYESMLKISPDHYQILVSLSYVYEAVGNIDAAIEAAERSIQV 237

Query: 355 APRK 358
           AP +
Sbjct: 238 APTQ 241



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 46/151 (30%), Gaps = 6/151 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                +  ++  A +    +L         ++   Y    +      A       L ISP
Sbjct: 147 ADALKSAGEWARAEDIYRELLVAKPGDFDLSMKLAYVLVLQR-QYQEAIMLYESMLKISP 205

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D   +  ++   Y        AI    +  + A    +      +  + +   K D+  +
Sbjct: 206 DHYQILVSLSYVYEAVGNIDAAIEAAERSIQVAPT--QPEGYNNLGNAFKL--KHDLENA 261

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             +  +++ L  +  MA    A + + Q   
Sbjct: 262 SENFRKAISLRPDFAMAEFNLATTRMLQGNL 292


>gi|153207820|ref|ZP_01946420.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218831|ref|YP_002305618.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuK_Q154]
 gi|120576372|gb|EAX32996.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212013093|gb|ACJ20473.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuK_Q154]
          Length = 561

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 76/261 (29%), Gaps = 41/261 (15%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A E    +L+    +  A++       ++   + A  Y  +AL + P       
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLCRNDEALHYIDRALLLEPQNATFQN 74

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +         +   A    +Q  +   ++    A      +     +     +     ++
Sbjct: 75  SRGNILSQHGKLVEATIAYDQAIQLQPDY----ATAYNNIANCFFRQKKFDNAKKAYQKA 130

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIY-------- 299
           + L  +   A    A+ LI      +A   L++   ++ H      ++A++Y        
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSK 190

Query: 300 --------THLLSENTVGK----------------LKRALRLEEINKESVESLVIVSKIA 335
                     L  EN   +                +        +N E  +    ++   
Sbjct: 191 AITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY 250

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
           L+ G   +A    +  ++  P
Sbjct: 251 LQRGDHKEALIHYLRQLEKKP 271


>gi|300721441|ref|YP_003710716.1| protoheme IX synthesis protein [Xenorhabdus nematophila ATCC 19061]
 gi|297627933|emb|CBJ88479.1| protein in late step of protoheme IX synthesis with TPR-like domain
           [Xenorhabdus nematophila ATCC 19061]
          Length = 401

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/374 (15%), Positives = 122/374 (32%), Gaps = 16/374 (4%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHM-LHKR 79
           +S +   V I   +    TS   ++ +     F  I +    R                 
Sbjct: 21  MSGHQGYVLIQTDSNNITTSITAVVIMFLLLQFLLIFIGWCYRRLKRTSTSTHSWIFGGF 80

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             ++        L+ +A  +    +  H             + YLL  + A     Y   
Sbjct: 81  KRNRARSQTRQALLKLAEGDFK--QVEHLMTRNADHAEYPVVNYLLAAEAAQQRGDYFHT 138

Query: 140 HEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           ++ +E   ++    +  V  S        G++++A+    K L+ +P  P V     + Y
Sbjct: 139 NQYIERAAEVADKDQLPVDISRVRIQLAQGEIHAARNGVDKLLNHAPRHPEVLRLAERAY 198

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS------LENADKGDMIASYHDAIES 252
            L+  +   I  L    K AK ++  +   +  ++         A+KG          + 
Sbjct: 199 SLSGAYQALIDVLPSMIK-AKLYDEEKIHAIRQQAYVGLMNQVFAEKGCTGLKAWWKDQG 257

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            K+  + ++  +  A+ LI+ N    A+ I+    K      +  +  HL + +     K
Sbjct: 258 RKIRQDIVLQVVM-AEHLIACNDHDTAQQIILDGLKQQYDERLLLLIPHLKANDAEAIQK 316

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ----IE 368
               L + +  +      + ++AL  G    A A    A+   P    +  LA     ++
Sbjct: 317 NLTHLLKQHGATPLLNSTMGQVALRHGEWANAEAAFKAALAQRPDAHDYAWLADALDKLQ 376

Query: 369 QANSHNTDKILYWT 382
           +       +   + 
Sbjct: 377 KHEEATQTRSKGFM 390


>gi|71895939|ref|NP_001025642.1| PRP6 pre-mRNA processing factor 6 homolog [Xenopus (Silurana)
           tropicalis]
 gi|60550964|gb|AAH91611.1| MGC97740 protein [Xenopus (Silurana) tropicalis]
          Length = 972

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 103/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 610 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 667

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 668 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAQD 727

Query: 229 LIARSL--------------ENADKGDMIA-SYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L              +  ++G+ I  +     + LK C +S    +  ++     
Sbjct: 728 LCEEALRHYEDFPKLWMMKGQIEEQGEQIEKARDAYNQGLKKCLHSTPLWLLLSRLEEKV 787

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP  PE+      L  E   G    A  L     +E   S ++ 
Sbjct: 788 GQLTRARAILEKSRLKNPKTPELWLESVRL--EFRAGLKNIANTLMAKALQECPNSGILW 845

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 846 AE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 903

Query: 391 D 391
           D
Sbjct: 904 D 904



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 319 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 375

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 376 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DLRAKKRVLRKA 427

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    +VE  + ++++     + + A
Sbjct: 428 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTNVELWLALARL----ETYENA 480

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 481 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 526


>gi|50120884|ref|YP_050051.1| tetratricopeptide repeat protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611410|emb|CAG74858.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 389

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 15/243 (6%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + + +        R  AV  L  +    G  + A+    + +D       
Sbjct: 83  GEVDRAIRIHQALTESASLTFEQRLLAVQQLGRDYMAAGLYDRAEEIFNQLVDEEDFRRS 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++Q +    +W  AI    +  K  K+  R   A      +L      D+  +   
Sbjct: 143 ALQQLLQIHQATSDWLTAIDVAEKLVKMGKDELRVDIAHFYCELALLAMGSDDLDKALTF 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIANIYTHL 302
             +     +    ASI   +  ++Q    +A   L       K       P +   Y HL
Sbjct: 203 LKKGASADNQCARASIMMGRIYMAQQDYSRAVEALRQVLDQDKELVSETLPMLQECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF- 361
              NT+       R  E N  +  + ++++ I       + A       ++  P   +F 
Sbjct: 263 --GNTLDWAHFLKRCVEENTGAT-AELMLADILEREEGAEVAQVYINRQLQRHPTMRVFH 319

Query: 362 LLL 364
            L+
Sbjct: 320 RLM 322


>gi|114320095|ref|YP_741778.1| tetratricopeptide repeat protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226489|gb|ABI56288.1| Tetratricopeptide TPR_2 repeat protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 389

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 98/306 (32%), Gaps = 27/306 (8%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R +A+  L  +  R G L+ A+    + +D++     
Sbjct: 83  GEVDRAIRIHQNLIARPALSRQQRTYALLELGEDYMRAGLLDRAETLFEEVIDLNHHVEP 142

Query: 190 VTEAVVQQYVLAKEWSRAI-TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   KEW +AI   L  +K +A+  +   A      + E    GD+  +   
Sbjct: 143 ALRQLLAIYQQEKEWDQAIGAALRLEKVSAQNLHPQVAHFYCEMAGEAWAAGDLSRARTL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
              +L      + ASI A          R+A  +  ++      P  A  +   + +   
Sbjct: 203 YKRALTHDPRCVRASIQAGHLARQMGHARQAVRLYRQV------PTQAPEFVGEVLDGLY 256

Query: 309 GKLKRALRLEEINKESVESLVIVSKI----ALEMGSI-------DQAHAKAMLAMKIAPR 357
             L+   +L     E ++ L+   K     AL            + A       ++  P 
Sbjct: 257 QALESLGQLHRY-PEFLDQLLATGKAPVAVALAKVEWLRAEAGHEAAMRWLAEHLEAQPS 315

Query: 358 KEIFLLLAQIEQANS----HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413
               L L ++            +  L+ T  AL            G+ +       P  K
Sbjct: 316 VRGLLRLVEMSDGAPPVAEGPVEAALHRTLRALLEARAQYLCGQCGFTARTLFWQCPGCK 375

Query: 414 TLCYFE 419
           +     
Sbjct: 376 SWGSIR 381


>gi|255010914|ref|ZP_05283040.1| TPR repeat-containing protein [Bacteroides fragilis 3_1_12]
          Length = 289

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 8/167 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           + L    I L +   + A+    ++M +    T    + + Y    R  D   A+    +
Sbjct: 111 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 168

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L+I P        +        ++  ++  LNQ      E     A+L +AR+    D 
Sbjct: 169 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPE----DAVLYVARADVERDM 224

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +  D  E+++L  NS+ A +      + Q KK +A+   EK 
Sbjct: 225 KHEDLALVDLDEAIRLAPNSVDAYLLRGDIYLDQKKKSQAKADFEKA 271



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 63/180 (35%), Gaps = 15/180 (8%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           ++A   L Q  +  +  N + A+L     L     G    +      +L +   ++   +
Sbjct: 55  AQAEDLLKQALR-LEPKNPHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILL 113

Query: 265 CAAKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALR 316
             A   + Q  + KA         + +K  +      +   Y + L  +    +L    R
Sbjct: 114 NRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQR 168

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375
           L EI+ ++    + ++ +  + G   ++       +   P    +++  A +E+   H  
Sbjct: 169 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPEDAVLYVARADVERDMKHED 228


>gi|168008775|ref|XP_001757082.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
 gi|162691953|gb|EDQ78313.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
          Length = 999

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 15/193 (7%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREF 155
              LA   H  +  Q  ++          +       Y++A          L+ P     
Sbjct: 272 EAALAATDHVLIKAQSYYN--------LARSYHTREDYDMAARYYRASTAELKNPKDFIL 323

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
             Y L     ++GD  +A     K L++ PD     +AV           +A+    +  
Sbjct: 324 PYYGLGQVHLKLGDWKAALASFEKVLELYPDNCETLKAVGHILGHQGRKEKALEHFKKAT 383

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQ 273
           +         A L +   L ++D    + S+  A   LK     +  ++          +
Sbjct: 384 RMNP--KDVDAWLEMGELLVSSDFAAALDSFQTAHTLLKRSQEVVPLALLNNIGVLHFEK 441

Query: 274 NKKRKAEVILEKI 286
           ++   A    ++ 
Sbjct: 442 DELESARKAYKQA 454



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 29/268 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +    R    Y        +E   ++ + Q+ +A+ +   A E  +++L        A+ 
Sbjct: 107 DEHFIRATQYYNKASRIDQDEASTWVGKGQLLVAKGELEQAQEVFKIVLDGQRDNVAALL 166

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                    G    A +   KAL I P  P    + V+Q      + +     +     +
Sbjct: 167 GQACVQFNSGRFQEALKLYKKALQIHPQCPASAFDRVLQL-----DGNNVEALVGSGIID 221

Query: 218 --AKEWNRNRAILLIARSLENADKGDMIASYHDA-----IESLKLCDNSIMASICAAKSL 270
             + + NR +A L    +         +A  H A     ++   + +    A++ A    
Sbjct: 222 LNSGDENRVQAGLEKMLAAFEIYPYCSMALNHLACHYFFLDQHPMVEQLTEAALAATDH- 280

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-ESLV 329
                      +L K      +  +A  Y      +   +  RA   E  N +       
Sbjct: 281 -----------VLIKA---QSYYNLARSYHTREDYDMAARYYRASTAELKNPKDFILPYY 326

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            + ++ L++G    A A     +++ P 
Sbjct: 327 GLGQVHLKLGDWKAALASFEKVLELYPD 354


>gi|73997220|ref|XP_543747.2| PREDICTED: similar to ARG99 protein isoform 2 [Canis familiaris]
          Length = 865

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 91/307 (29%), Gaps = 52/307 (16%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL ++P 
Sbjct: 473 ANFLKDQGRNREAISHYRTALRLYPRHASALNNLGTLTR---DAAEAKMYYQRALQLNPQ 529

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    +   E+    + L    + +           
Sbjct: 530 HNRALFNLGNLLKSQEKKEEAITLLKDSIQYGPEFADAYSSLASLLAEQERFKEAEEIYQ 589

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++ L  +  +A +   +   S    
Sbjct: 590 AGIKNCPDSSDLHNNYGVFLVDTGSPEKAVAHYQQAIALSPSHHVAMVNLGRLYRSLGDN 649

Query: 277 -------RKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESL 328
                  ++A  +  K   ++P   +  +Y +    E  +   + A     +     E  
Sbjct: 650 SAAEEWYKRALQVARKAEILSP---LGALYYNTGRYEEALQIYREA---AALQPSQRELR 703

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI-EQANSHNTDKILYWTQSAL 386
           + ++++   MG   +A       +       E + LL+ I  +   H+  K L     AL
Sbjct: 704 LALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQEHHD--KALDVIDKAL 761

Query: 387 H-AMPDP 392
                DP
Sbjct: 762 QLKPKDP 768



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 90/284 (31%), Gaps = 39/284 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +   +   A   +         H+  +V L   ++  +    + A E  +  LQ+ 
Sbjct: 606 GVFLVDTGSPEKAVAHYQQAIALSPSHHVAMVNL--GRLYRSLGDNSAAEEWYKRALQVA 663

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +       
Sbjct: 664 RKAEI-LSPLGALYYNTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQ------T 716

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              +K      +     L   R L      +     +     ++L+L        +  ++
Sbjct: 717 KEAEKMTNHIVSEETGCLECYRLLSAIYSKQEHHDKALDVIDKALQLKPK-DPKVV--SE 773

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              ++  + + + +L+K ++                              E+N +  ++ 
Sbjct: 774 LFFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQAW 809

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           + +  I    G+   A A    A+++ P  ++    LA++++  
Sbjct: 810 MNMGGIQHIKGNYVSARAYYERALQLVPDSKLLQENLAKLDRLE 853



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 102/282 (36%), Gaps = 23/282 (8%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L  LL  Q      ++  A E  +  ++    ++     Y ++      G    A  + 
Sbjct: 570 SLASLLAEQ-----ERFKEAEEIYQAGIKNCPDSSDLHNNYGVFL--VDTGSPEKAVAHY 622

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+ +SP        + + Y    + S A  +  +  + A      +A +L        
Sbjct: 623 QQAIALSPSHHVAMVNLGRLYRSLGDNSAAEEWYKRALQVA-----RKAEILSPLGALYY 677

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-----ILEKIWKVNPH 292
           + G    +     E+  L  +     +  A+ L    + ++AE      + E+   +  +
Sbjct: 678 NTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECY 737

Query: 293 PEIANIYTHLLSEN-TVGKLKRALRLEEINKESV-ESLVIVSKIALEMGSIDQAHAKAML 350
             ++ IY+     +  +  + +AL+L+  + + V E          E   +D+A      
Sbjct: 738 RLLSAIYSKQEHHDKALDVIDKALQLKPKDPKVVSELFFTKGNQLREQNLLDKAFESYKA 797

Query: 351 AMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           A+++ P +   ++ +  I+     N      + + AL  +PD
Sbjct: 798 AVELNPDQAQAWMNMGGIQHIK-GNYVSARAYYERALQLVPD 838


>gi|222056573|ref|YP_002538935.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221565862|gb|ACM21834.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 264

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 71/222 (31%), Gaps = 12/222 (5%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY  L   L          A +      ++     E    L    I     Q+  A    
Sbjct: 41  GYFYLGEAL--AETGKQAEAIESIKAGLKRAPEDIEAWTSL--GDILFESGQHKEAIAAY 96

Query: 144 EMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           + ++++            L + S    D   A +   KAL++ P   +   A+   Y   
Sbjct: 97  KKVIELRPAEADGYVSLGLVYNSLERADD--ALQAFNKALELDPHNVFALNALGDLYYGL 154

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
               +AI       +     + N A           D GD+ ++  + +E+++L  N  M
Sbjct: 155 GNNDQAIE----AYRKGIALDPNDAAARFNLGDLFYDLGDLESAEKETLEAVRLDPNFTM 210

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           + +      I Q +  +A    E   K    P+ A +   + 
Sbjct: 211 SYLTLGNICIDQERLAEATKYFELYLKKEKSPQAAEMIAEVK 252



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 19/193 (9%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A E+ +A   +  K     E +       +  +L  A+ G    +       LK     
Sbjct: 17  EAGEYGKA--SVEFKACTEVEPDNAEGYFYLGEAL--AETGKQAEAIESIKAGLKRAPED 72

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRA 314
           I A       L    + ++A    +K+ ++ P        +  +Y  L  E     L+  
Sbjct: 73  IEAWTSLGDILFESGQHKEAIAAYKKVIELRPAEADGYVSLGLVYNSL--ERADDALQAF 130

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--------LAQ 366
            +  E++  +V +L  +  +   +G+ DQA       + + P               L  
Sbjct: 131 NKALELDPHNVFALNALGDLYYGLGNNDQAIEAYRKGIALDPNDAAARFNLGDLFYDLGD 190

Query: 367 IEQANSHNTDKIL 379
           +E A     + + 
Sbjct: 191 LESAEKETLEAVR 203


>gi|228996733|ref|ZP_04156370.1| hypothetical protein bmyco0003_13190 [Bacillus mycoides Rock3-17]
 gi|229004399|ref|ZP_04162155.1| hypothetical protein bmyco0002_13540 [Bacillus mycoides Rock1-4]
 gi|228756853|gb|EEM06142.1| hypothetical protein bmyco0002_13540 [Bacillus mycoides Rock1-4]
 gi|228763052|gb|EEM11962.1| hypothetical protein bmyco0003_13190 [Bacillus mycoides Rock3-17]
          Length = 420

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 90/277 (32%), Gaps = 51/277 (18%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +     E ++     ++  ++ +   A    + +L           A+  L   
Sbjct: 121 QKLLKAKEMMPEEPVITFGLAELYSSKGEEQKAIAYYQSLLSDHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVV------QQYVLAKEWSRAITFLNQKKKN 217
              IG+   A  Y  + L+   D   +           +       W           K 
Sbjct: 180 LSAIGNWEEAITYYEEGLEEQKDIHSLFGYAFTLYQGEEYQRSIGAW-----------KE 228

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            KE +   A L +  +     +G +  SY    E +K+ + S+   +  A       K  
Sbjct: 229 LKELDPEYASLYMYLAKCYEREGMLQESYETLHEGIKIDELSVPLYVELANIAAKIGKLA 288

Query: 278 KAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +AE +L+K  +++P H  +  I  Y ++L E                 E  E L++V + 
Sbjct: 289 EAEELLQKALQIDPGH--LGAILKYAYILKEQ----------------EKYEELIVVVEN 330

Query: 335 ALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           A++ G        D A AK  L M        +  + 
Sbjct: 331 AMDSGEQDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|325116704|emb|CBZ52257.1| putative U5 snRNP-associated 102 kDa protein [Neospora caninum
           Liverpool]
          Length = 1114

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 112/343 (32%), Gaps = 49/343 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           ++A  ++  AR +++    +     + L   L    A  E ++  A    +++ +     
Sbjct: 614 ALARGSVATARALYTCAI-ERLKTKKSLWLAL----ADLETKHGTAEHLEKLLQKAVLCC 668

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P      +  L  +    GD+ +A++   +A   + +   ++ A V+      E+ RA  
Sbjct: 669 PQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLERENNEFLRARK 727

Query: 210 FLNQKKKN--------------AKEWNRNRAILLIARSLENADKG--------------- 240
            L + + +               +  + + AI L   +L+   +                
Sbjct: 728 ILKRTRAHVNTQKVWMQSVQLERQVGDYDAAIALCEEALQKHPECAKLWMIGGQLHREHP 787

Query: 241 ---DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296
              +   +         +C  S+   +CA      Q K   A  ILEK    NP +PE+ 
Sbjct: 788 TKKNDETAAEVFQRGTVVCPRSVPVWLCAVDCQREQGKWSVARAILEKAKLRNPKNPELW 847

Query: 297 NIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +    +  E   G  + A  +      E   S ++ ++         Q H       K  
Sbjct: 848 HAAIQIEVE--AGNKQMAQHVASKAVQECPSSGLVWAEAIFLEEKSAQTHKAVDALTKCE 905

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396
               + L +A++         K   W   ++   A     W +
Sbjct: 906 NDVHLVLAVARLFWREGK-ISKARKWLNRSVTLDASFGDAWAA 947


>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 412

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 107/293 (36%), Gaps = 32/293 (10%)

Query: 118 NEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           +   +YLL  + A  E   ++  A +  +  ++I +       ++ F   +IG+   A  
Sbjct: 95  DPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVE 154

Query: 176 YATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
              KALD+ PD P  W  +A+      A  +  A+   +   K    +    A     + 
Sbjct: 155 AYGKALDLKPDYPNAWYGKAL--NLSQAGRYEEAVDAYDIVLKENSNYKEAWA----GKG 208

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +     G+   +     ++L++    + A       L S    ++A    EK  +++P  
Sbjct: 209 IALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDPEN 268

Query: 294 EIANIYTHLLSE-NTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           +  + + ++  +   + +    +    +  EIN E+ +          ++   D+A    
Sbjct: 269 D--DAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 326

Query: 349 MLAMKIAP-----RKEIFLLLAQIEQANSH----------NTDKILYWTQSAL 386
             A+++ P        +  +LAQ+++              + +    W   A+
Sbjct: 327 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAV 379


>gi|256830344|ref|YP_003159072.1| hypothetical protein Dbac_2579 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579520|gb|ACU90656.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 786

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 9/231 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G  + A+      + + P+       + +  +  + W  A     +      E    
Sbjct: 35  EEAGRFSEARVEGRNVIKLDPNHVGAHLLLARCALKEQNWREAFGNFQRAV----ELEPA 90

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               L+         GD   +   A + L L   S+   +  A +++   +  +A   L+
Sbjct: 91  NTEALLGVGRLYLLSGDTNQAEAHAGQVLALDPQSVDGLLLRAGAMLRAKRFEEAGRQLD 150

Query: 285 KIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            ++  +P  E   +A    H         L    +      +S       + +A +M   
Sbjct: 151 LVFAKDPANEDALLALSVIHSEQGRNSDALAVIGKGIGKKPDSRPLHFRAASLAADMEDY 210

Query: 342 DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A    +   ++ P    + +LLA + +    N  ++    +  L A P 
Sbjct: 211 AAAEQHLLKLKELDPANRGVQILLAALYERMGQN-GRVEGILRELLAAEPG 260



 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 19/393 (4%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---E 163
            +    Q    +  L  L    + L   + +     L  +          + +       
Sbjct: 280 DALAVAQEGEPSPKL-RLASAAVLLTVGRADEGEAALVALAGDKEAGPAGIEARLRMSEI 338

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             R GD + A     + L ++P       A  + ++L   +  A+  L     +A +   
Sbjct: 339 KLRRGDRDGALAEVDEVLRLNPADARAHAARGRIFMLQDRFEEALAELRIALHDAPD--- 395

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               + +  +      G+ ++        L    +++   +  A       +   A  +L
Sbjct: 396 -DMAVAVLMARAQFALGNTLSGVEALRNFLLKKPDAVPVRLELAAHHQRAGEPDAALAVL 454

Query: 284 EKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +        P    +A        E+         +  + N+    +L+ +  +      
Sbjct: 455 QGGENGGRMPAQLMLAMGDIEARREHFDAAEIYYRQAAQENEAHAPALLRLGSMHGGRKD 514

Query: 341 IDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399
            D A       +  +P        +  +E A       + +  + +     DPL     G
Sbjct: 515 WDAARRTFDELLLASPDAHGGAEGVVAVELAAGRGEAALAWAAERSASRPSDPLAADLQG 574

Query: 400 YLSSVWLPLSPISKTL-----CYFEWKIPTK--SPEYISSENINFSLEMAYPADDLQSML 452
             +     +    K          EW +P+   +  Y S+   + ++     A       
Sbjct: 575 RTALRLGNVDEAEKAFREAQRRAPEWSVPSARLAGLYASTGRKDTAVAECRAALAKNPDS 634

Query: 453 NNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPD 485
                     ++      ++         R PD
Sbjct: 635 VPEGLLLGQLLQLGGETAEAEAIFRKLLARHPD 667



 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 87/290 (30%), Gaps = 16/290 (5%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            A   +   +Q++  H   L+ L  +      + ++ A    + +L            + 
Sbjct: 483 AAEIYYRQAAQENEAHAPALLRLGSMHGGR--KDWDAARRTFDELLLASPDAHGGAEGVV 540

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                 G   +A  +A +     P  P   +   +  +       A     + ++ A EW
Sbjct: 541 AVELAAGRGEAALAWAAERSASRPSDPLAADLQGRTALRLGNVDEAEKAFREAQRRAPEW 600

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +   A L    +      G    +  +   +L    +S+   +   + L    +  +AE 
Sbjct: 601 SVPSARLAGLYAS----TGRKDTAVAECRAALAKNPDSVPEGLLLGQLLQLGGETAEAEA 656

Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSEN-TVGKLKRALRLEEINK--ESVESLVIVSK 333
           I  K   +  HP++        Y  +  +  T  +L  AL L           +L  V  
Sbjct: 657 IFRK--LLARHPDLLPAANNLAYLLVSHDAPTTEQLSEALALATRASAGGDPSALDTVGW 714

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
           +   +G  D A      A +  P             A+   T +      
Sbjct: 715 VHYRLGDKDAALQFLRKAHESLPEDPAVTYHLARVLADLGQTGEARELLT 764



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 58/206 (28%), Gaps = 19/206 (9%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--- 149
           ++       LA       S+     ++ L   L+ + AL     + A +      +    
Sbjct: 544 LAAGRGEAALAWAAERSASR----PSDPLAADLQGRTALRLGNVDEAEKAFREAQRRAPE 599

Query: 150 ---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
              P+ R   +Y         G  ++A      AL  +PD+      + Q   L  E + 
Sbjct: 600 WSVPSARLAGLY------ASTGRKDTAVAECRAALAKNPDSVPEGLLLGQLLQLGGETAE 653

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI-C 265
           A     +      +     A   +A  L + D             + +       +++  
Sbjct: 654 AEAIFRKLLARHPDL--LPAANNLAYLLVSHDAPTTEQLSEALALATRASAGGDPSALDT 711

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291
                     K  A   L K  +  P
Sbjct: 712 VGWVHYRLGDKDAALQFLRKAHESLP 737



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 3/146 (2%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A  L+  + G    +  +    +KL  N + A +  A+  + +   R+A    ++  ++ 
Sbjct: 29  ANGLKFEEAGRFSEARVEGRNVIKLDPNHVGAHLLLARCALKEQNWREAFGNFQRAVELE 88

Query: 291 PH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P      +     +LLS +T      A ++  ++ +SV+ L++ +   L     ++A  +
Sbjct: 89  PANTEALLGVGRLYLLSGDTNQAEAHAGQVLALDPQSVDGLLLRAGAMLRAKRFEEAGRQ 148

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSH 373
             L     P  E  LL   +  +   
Sbjct: 149 LDLVFAKDPANEDALLALSVIHSEQG 174


>gi|253688744|ref|YP_003017934.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755322|gb|ACT13398.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 389

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 15/243 (6%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + + +        R  AV  L  +    G  + A+    + +D       
Sbjct: 83  GEVDRAIRIHQALTESASLTFEQRLLAVQQLGRDYMAAGLYDRAEESFNQLVDEEDFRRS 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++Q Y    +W  AI    +  K  K+  R   A      +L      D+  +   
Sbjct: 143 ALQQLLQIYQATSDWPAAIDAAEKLVKMGKDQLRVDIAHFYCELALLAMGSDDLDKALTL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIANIYTHL 302
             +     +    ASI   +  ++Q    +A   L       K       P +   Y HL
Sbjct: 203 LKKGAAADNQCARASIMMGRIYMAQQDYSRAVEALRQVLDQDKELVSETLPMLQECYQHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF- 361
             +  +       R  E N  +  + ++++ I       + A A     ++  P   +F 
Sbjct: 263 --DKPLDWENFLKRCVEENTGAT-AELMLADILEREEGAEVAQAYINRQLQRHPTMRVFH 319

Query: 362 LLL 364
            L+
Sbjct: 320 RLM 322


>gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
 gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
          Length = 342

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 8/157 (5%)

Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSL-YFESCRIGDLNSAQRYATKALDISP 185
            A A R Y+ A     + +   P   R +    L Y E+    +   A+    KAL I+P
Sbjct: 34  AAFAARNYSEAIANFHKALRANPDEPRIWNALGLAYMEAK---EYKKAEESFKKALSINP 90

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +     + +   Y     +  A+ +L +   +     ++ A      +     K D+   
Sbjct: 91  NYSEARKNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEA--FYYLAKVYEAKQDLKNY 148

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                +++    N + A +  A++  +  K  +AE I
Sbjct: 149 VRYLEKAVAYNPNFVQAQLELAQAYENLGKYEEAEKI 185



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 53/154 (34%), Gaps = 13/154 (8%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A+ +S AI   ++  +   +  R    +  A  L   +  +   +     ++L +  N 
Sbjct: 37  AARNYSEAIANFHKALRANPDEPR----IWNALGLAYMEAKEYKKAEESFKKALSINPNY 92

Query: 260 IMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPE---IANIYTHLLSENTVGKLK 312
             A            +  +A   L++     +    H     +A +Y     ++    ++
Sbjct: 93  SEARKNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEAFYYLAKVYEA--KQDLKNYVR 150

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
              +    N   V++ + +++    +G  ++A  
Sbjct: 151 YLEKAVAYNPNFVQAQLELAQAYENLGKYEEAEK 184


>gi|5052534|gb|AAD38597.1|AF145622_1 BcDNA.GH04245 [Drosophila melanogaster]
          Length = 1011

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 271 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 330

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       N A  L   +    ++G +  +    +++L++ 
Sbjct: 331 ALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKREQGYIEEATRLYLKALEVF 386

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
            +   A    A  L  Q K ++A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 387 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 444

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 445 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 490



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 37/306 (12%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY---- 120
             L +             GY  L   L++        AR M S V               
Sbjct: 136 EALDNYRRAVRLKPDFIDGYINLAAALVA--------ARDMESAVQAYITALQYNPDLYC 187

Query: 121 ----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L  LL+        +   A       ++       A  +L       G++  A  +
Sbjct: 188 VRSDLGNLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHH 242

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             KA+ + P+       +      A+ + RA+    +    +     N A++    +   
Sbjct: 243 FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 298

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEI 295
            ++G +  +      +++L  N   A    A +L  + + ++AE       ++ + H + 
Sbjct: 299 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS 358

Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            N   ++  E        +L     LE    +   +   ++ +  + G + +A      A
Sbjct: 359 LNNLANIKREQGYIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEA 416

Query: 352 MKIAPR 357
           ++I P 
Sbjct: 417 IRIQPT 422



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 336 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPDFAAAH 393

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I P        +       ++ S A+    +  + 
Sbjct: 394 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 453

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 454 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502


>gi|17647755|ref|NP_523620.1| super sex combs, isoform B [Drosophila melanogaster]
 gi|24585827|ref|NP_724406.1| super sex combs, isoform A [Drosophila melanogaster]
 gi|24585829|ref|NP_724407.1| super sex combs, isoform C [Drosophila melanogaster]
 gi|6942068|gb|AAF32311.1|AF217788_1 O-glycosyltransferase [Drosophila melanogaster]
 gi|7302245|gb|AAF57338.1| super sex combs, isoform B [Drosophila melanogaster]
 gi|10728167|gb|AAG22338.1| super sex combs, isoform A [Drosophila melanogaster]
 gi|10728168|gb|AAG22339.1| super sex combs, isoform C [Drosophila melanogaster]
 gi|189182206|gb|ACD81879.1| SD06381p [Drosophila melanogaster]
          Length = 1059

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 271 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 330

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       N A  L   +    ++G +  +    +++L++ 
Sbjct: 331 ALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKREQGYIEEATRLYLKALEVF 386

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
            +   A    A  L  Q K ++A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 387 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 444

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 445 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 490



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 37/306 (12%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY---- 120
             L +             GY  L   L++        AR M S V               
Sbjct: 136 EALDNYRRAVRLKPDFIDGYINLAAALVA--------ARDMESAVQAYITALQYNPDLYC 187

Query: 121 ----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L  LL+        +   A       ++       A  +L       G++  A  +
Sbjct: 188 VRSDLGNLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHH 242

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             KA+ + P+       +      A+ + RA+    +    +     N A++    +   
Sbjct: 243 FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 298

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEI 295
            ++G +  +      +++L  N   A    A +L  + + ++AE       ++ + H + 
Sbjct: 299 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS 358

Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            N   ++  E        +L     LE    +   +   ++ +  + G + +A      A
Sbjct: 359 LNNLANIKREQGYIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEA 416

Query: 352 MKIAPR 357
           ++I P 
Sbjct: 417 IRIQPT 422



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 336 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPDFAAAH 393

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I P        +       ++ S A+    +  + 
Sbjct: 394 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 453

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 454 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502


>gi|323179519|gb|EFZ65086.1| cellulose synthase operon protein C [Escherichia coli 1180]
          Length = 1157

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|253702418|ref|YP_003023607.1| hypothetical protein GM21_3832 [Geobacter sp. M21]
 gi|251777268|gb|ACT19849.1| TPR repeat-containing protein [Geobacter sp. M21]
          Length = 688

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 20/188 (10%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD------- 238
           D+PW     + +   A EW   +  + +               L A +   A+       
Sbjct: 115 DSPWYPTLRLFRQRQAGEWEEVVARVKEALAREASPASVSPQALHADARGEAEIWNNRGC 174

Query: 239 ----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--- 291
                G  + +     E++ L  + + A      SL +  +  +A         ++P   
Sbjct: 175 AEAAAGRHLEAVESYREAIALAPDLMPAHYNLGNSLYALGRIAEAAESYRWALALDPALP 234

Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
              H     +      +  +  L+RALR+     + +E+     ++  E G +D+A A  
Sbjct: 235 QGWHNLSLALKAQGALDEALHALRRALRIA---PDYLEARHTQGELHHERGELDEAQACF 291

Query: 349 MLAMKIAP 356
              +   P
Sbjct: 292 RENLSRDP 299



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 55/198 (27%), Gaps = 15/198 (7%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G    AA     A + +                L       A  +   A E     L +
Sbjct: 172 RGCAEAAAGRHLEAVESYREAIALAPDLMPAHYNL--GNSLYALGRIAEAAESYRWALAL 229

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                   ++L       G L+ A     +AL I+PD         + +    E   A  
Sbjct: 230 DPALPQGWHNLSLALKAQGALDEALHALRRALRIAPDYLEARHTQGELHHERGELDEAQA 289

Query: 210 FLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              +       +     A+ +  +     ++     +     ++L L  + +        
Sbjct: 290 CFRENLSRDPGYLPSWNALGISLQLQGLLEE-----AVDCYQKALALKPDYL-------H 337

Query: 269 SLISQNKKRKAEVILEKI 286
           +L +     ++  +LE+ 
Sbjct: 338 ALNNLGTASRSLGLLEQA 355


>gi|313680431|ref|YP_004058170.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313153146|gb|ADR36997.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 362

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 85/262 (32%), Gaps = 31/262 (11%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-----QIPATREFAVYSLYFESCRIG 168
               +E  V+ +  QI      +  A +  +  L       PA    A+ +L F + + G
Sbjct: 61  KLEPDEPEVWRVLAQIYTTTGWWIRAEKAWKRYLVLAGESNPAPLAEALRALGFLAYQRG 120

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE-------WSRA-------ITFLNQK 214
           D+ +A  Y  +AL + P++      + + Y+   +       W  A             +
Sbjct: 121 DVKAALDYFEQALVLEPESEEALAWLGRIYLELGDGIRAAEYWRLAAKVNPSPRNTYFAE 180

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +        + A+    +     + GD   +      +  L  +   A    A+S +   
Sbjct: 181 QAEKMAQYGSEAVKAFYQGYAAWEAGDYPTAIQQFETAAGLAPDWSEAHRWLARSYMDAG 240

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
              +A    EK+  +  +P  A  +  L  E     L  A    +               
Sbjct: 241 MPARAIPHWEKVIALEGNPADARHFLKLAREAAGVGLSAADAFFK------------GVA 288

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
           A E G +++A      A++  P
Sbjct: 289 AYEAGRLEEAEHWFARAVEADP 310



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 76/251 (30%), Gaps = 41/251 (16%)

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKG 240
            + PD P V   + Q Y     W RA     +    A E N    A  L A       +G
Sbjct: 61  KLEPDEPEVWRVLAQIYTTTGWWIRAEKAWKRYLVLAGESNPAPLAEALRALGFLAYQRG 120

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------- 293
           D+ A+     ++L L   S  A     +  +      +A        KVNP P       
Sbjct: 121 DVKAALDYFEQALVLEPESEEALAWLGRIYLELGDGIRAAEYWRLAAKVNPSPRNTYFAE 180

Query: 294 --------------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                              Y    + +    +++      +  +  E+   +++  ++ G
Sbjct: 181 QAEKMAQYGSEAVKAFYQGYAAWEAGDYPTAIQQFETAAGLAPDWSEAHRWLARSYMDAG 240

Query: 340 SIDQAHAKAML--AMKIAP-RKEIFLLLAQIEQA----------------NSHNTDKILY 380
              +A        A++  P     FL LA+                     +   ++  +
Sbjct: 241 MPARAIPHWEKVIALEGNPADARHFLKLAREAAGVGLSAADAFFKGVAAYEAGRLEEAEH 300

Query: 381 WTQSALHAMPD 391
           W   A+ A P+
Sbjct: 301 WFARAVEADPE 311


>gi|108758601|ref|YP_633027.1| adventurous gliding motility protein AglT [Myxococcus xanthus DK
           1622]
 gi|108462481|gb|ABF87666.1| adventurous gliding motility protein AglT [Myxococcus xanthus DK
           1622]
          Length = 478

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 7/224 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y     K +  L+       A Y+L   + R G L  A+ +   AL   P     +E +
Sbjct: 75  DYPSLERKFQSALEADGNLAEADYNLGVLAERQGKLTEARNHYKTALTKKPSLRQASENL 134

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                 A   + A+    +  +   +  ++RA L    +     +GD   +      +L 
Sbjct: 135 AVMEQNAGNVAGAVALYQEVLQRYPDDAQSRARL----AEIFRQQGDHTKAMDLTRAALM 190

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPEI--ANIYTHLLSENTVGKL 311
               S  A     +S + + +   A+++ L  +      PE+  A     L   +     
Sbjct: 191 RDPQSTTALKVMIRSYLDRKQLAMAKLVALRGVKLDAADPELHHAVGLILLQEGDVDDAR 250

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               +  E+ ++ V S V ++++AL   +   A       ++  
Sbjct: 251 LSFKKALEVREDYVPSHVELAQLALAAENYPTAEQHLRRILQAD 294


>gi|323944499|gb|EGB40571.1| cellulose synthase operon protein C [Escherichia coli H120]
          Length = 1157

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 105/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +M +   A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVMET---ANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|323526980|ref|YP_004229133.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323383982|gb|ADX56073.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 627

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/276 (10%), Positives = 77/276 (27%), Gaps = 12/276 (4%)

Query: 72  LFHMLHKRNYDKGYKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
           +   ++ R  D   +  L   L ++   +  +A+  ++            + +       
Sbjct: 70  VRRAVNLRPQDAALQLNLGNALKALGQIDEAIAQFRNALTLAPSF----PMAHYNLGNAY 125

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            A  ++  A +     L++      +  +L      +G    A     + L++ P     
Sbjct: 126 AAAGRHEDAADAFRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGA 185

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +            AI            +           +      G    +     
Sbjct: 186 LNNMGMSLNALGRADEAIPCFEAALAAEPRF----VAAHFNLANTFDATGRHAQAVASFE 241

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENT 307
            +L L  N   A      +L +  +  +A   LE+   ++P   +A +     H      
Sbjct: 242 AALALQPNLPPAIFGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLCLGSAHQGLGAH 301

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
              L+   +   +  +   + +  +   L +G   +
Sbjct: 302 ATALRAFDQALRLQPDLASAHMNRALAWLALGDFAR 337



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 6/157 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A    E  L        A ++L       G    A      AL + P+ P     
Sbjct: 197 GRADEAIPCFEAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLPPAIFG 256

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +          + AI +L +      +     A L +  + +    G    +     ++L
Sbjct: 257 MGNALAALGRHTEAIPYLERSV--GLDPQFALAWLCLGSAHQGL--GAHATALRAFDQAL 312

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           +L  +   A +  A + ++     +   + E  W++ 
Sbjct: 313 RLQPDLASAHMNRALAWLALGDFARG--LPEYEWRLQ 347


>gi|228990635|ref|ZP_04150600.1| hypothetical protein bpmyx0001_13970 [Bacillus pseudomycoides DSM
           12442]
 gi|228769161|gb|EEM17759.1| hypothetical protein bpmyx0001_13970 [Bacillus pseudomycoides DSM
           12442]
          Length = 420

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 88/275 (32%), Gaps = 47/275 (17%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +     E ++     ++  ++ +   A    + +L           A+  L   
Sbjct: 121 QKLLKAKEMMPEEPVITFGLAELYSSKGEEQKAIAYYQSLLSDHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVV------QQYVLAKEWSRAITFLNQKKKN 217
              IG+   A  Y  + L+   D   +           +       W           K 
Sbjct: 180 LSAIGNWEEAITYYEEGLEEQKDIHSLFGYAFTLYQGEEYQRSIGAW-----------KE 228

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            KE +   A L +  +     +G +  SY    E +K+ + S+   +  A       K  
Sbjct: 229 LKELDPEYASLYMYLAKCYEKEGMLQESYETLHEGIKIDELSVPLYVELANIAAKIGKLA 288

Query: 278 KAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +AE +L+K  +++P H      Y ++L E                 E  E L++V + A+
Sbjct: 289 EAEELLQKALQIDPGHLGTILKYAYILKEQ----------------EKYEELIVVVENAM 332

Query: 337 EMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           + G        D A AK  L M        +  + 
Sbjct: 333 DSGEQDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|189426401|ref|YP_001953578.1| hypothetical protein Glov_3352 [Geobacter lovleyi SZ]
 gi|189422660|gb|ACD97058.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
          Length = 404

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 53/176 (30%), Gaps = 18/176 (10%)

Query: 118 NEYLVYLLEVQ--IALAERQYNIAHEKLEMMLQIPATR------EFAVYSLYFESCRIGD 169
              L      Q        +   A +  +M L++  T+         VY         G 
Sbjct: 57  QPDLTEAYTYQGDAYARLGKRKEAIDAYKMSLKVDKTQDTVYTTLAGVY------IDNGQ 110

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A++     +  +         + Q      +++ A      ++    E         
Sbjct: 111 KSEAEKVLKDGIKQNNQNTLAYYMLGQLQAQNGDYTSAEANF--RQVIKLEPKDGNGYYA 168

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +  +L   +K D   +     ++  L  +   A +   ++     +K KA+ I++ 
Sbjct: 169 LGMALNGQEKYD--EAVEALQKATDLKADFSPALLELGRAYAGLGEKDKAQEIVDT 222


>gi|325916180|ref|ZP_08178464.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537600|gb|EGD09312.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC
           35937]
          Length = 690

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 67/222 (30%), Gaps = 10/222 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKE 220
            ++ R    + A   A +    +PD       +        + + A+  +        ++
Sbjct: 6   LQALRRNAADDAVALAREWASTAPDNAAAHRWLGLSLQQQGQPALALASIETALALTPED 65

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            + +     +  +  N    D   S   A     L  N   A +  A   +++     AE
Sbjct: 66  ADLHLLRAGLLLATRNLSAADAALSRSTA-----LDPNQFNAYVMQAHLAVARGDLDDAE 120

Query: 281 VILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            +     ++ P HP++  +     L    +   L    R  E   +    +  +    L+
Sbjct: 121 RLSRTAARLAPEHPQLLAVDGVVELRRGQSDRALSLLTRAAEQLPDDPRVMFALGFAYLQ 180

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378
                 A       +++ P        +AQ+ Q      D +
Sbjct: 181 KEHFAFAERAFERVVELNPPGTALRAFIAQLAQRQGRLDDAV 222


>gi|86141096|ref|ZP_01059655.1| hypothetical protein MED217_18130 [Leeuwenhoekiella blandensis
           MED217]
 gi|85833038|gb|EAQ51487.1| hypothetical protein MED217_18130 [Leeuwenhoekiella blandensis
           MED217]
          Length = 448

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 70/207 (33%), Gaps = 25/207 (12%)

Query: 160 LYFESCRIGDLNSAQRYAT----KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           LYFE  +        + A     KAL + P+   + EA+ + Y   +++ +AI  +    
Sbjct: 76  LYFEKAKNLAALGQVQEAENNYLKALQLKPNQRDIMEALYEVYYARQDFEKAIDLVQDLA 135

Query: 216 KNAKEWNRNRAIL-----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           K    +  + A +        +++   D+ D           ++       A   +    
Sbjct: 136 KFDIRYKEDLARIYVRQGAFEKAIAVLDELDEALGKDAYRNQIREQ-----ALALSGGDY 190

Query: 271 ISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVES 327
                       L      NP  E   +  IY +     T    + A +L +IN  + E 
Sbjct: 191 QE--------KRLLSAIAENPQNEKNYLNLIYVYSEQGKTQQAYQTAQKLLKINPNADEV 242

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKI 354
            + + K  LE   ++QA       MK 
Sbjct: 243 HLALYKFNLEQKEVEQAFKSLERVMKS 269



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 18/187 (9%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDL 170
                 +     +  Q              L  + + P        +  +Y E    G  
Sbjct: 166 DEALGKDAYRNQIREQALALSGGDYQEKRLLSAIAENPQNEKNYLNLIYVYSE---QGKT 222

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAIL- 228
             A + A K L I+P+A  V  A+ +  +  KE  +A   L +  K++K E     ++L 
Sbjct: 223 QQAYQTAQKLLKINPNADEVHLALYKFNLEQKEVEQAFKSLERVMKSSKIEAKAKHSVLN 282

Query: 229 ----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                + R+ E   + +   +     E+  + +             +  N K KA    E
Sbjct: 283 DFLIFVDRNPEYEPELEQAIALFSETEATDVNEEL-------GAYYLKNNDKTKALSYYE 335

Query: 285 KIWKVNP 291
             ++ NP
Sbjct: 336 AAYQKNP 342


>gi|300865159|ref|ZP_07109983.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
 gi|300336849|emb|CBN55133.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
          Length = 1093

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 70/232 (30%), Gaps = 31/232 (13%)

Query: 131 LAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAP 188
             E +   A       +   P       +    E+  ++G  + A      A+++ PD  
Sbjct: 11  QEEGKLEDAIAAYCRAIELNPDISW--YHHHLGEALSKLGRCDEASIAFRHAIELKPDFA 68

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W    +       +EW  +I    +  +   E   +   L  + +         +    +
Sbjct: 69  WSYHHLGDALAQQQEWEESIAAFRKAIELNPEHFGSYVGLGNSLAK--------LGQLDE 120

Query: 249 AIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
           AI + +        +  I  A               L K  +   H ++           
Sbjct: 121 AIAAYRRASELNPDAEWIHYA---------------LAKALQQRTHSDVVEAIASYRQMI 165

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           E     ++    L ++  ++ E  + +    ++ G +++A A     ++  P
Sbjct: 166 ELNPDNVEAYQNLLQLQSDNWELWLQLGNTLVQQGKLEEAIAAYRRLIEHNP 217



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 9/172 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +    G L  A     +A++++PD  W    + +          A        +   ++
Sbjct: 8   KQLQEEGKLEDAIAAYCRAIELNPDISWYHHHLGEALSKLGRCDEASIAFRHAIELKPDF 67

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +   L  A + +  +  + IA++  AIE   L      + +    SL    +  +A  
Sbjct: 68  AWSYHHLGDALA-QQQEWEESIAAFRKAIE---LNPEHFGSYVGLGNSLAKLGQLDEAIA 123

Query: 282 ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              +  ++NP     H  +A         + V  +    ++ E+N ++VE+ 
Sbjct: 124 AYRRASELNPDAEWIHYALAKALQQRTHSDVVEAIASYRQMIELNPDNVEAY 175


>gi|229043364|ref|ZP_04191081.1| hypothetical protein bcere0027_14130 [Bacillus cereus AH676]
 gi|228725945|gb|EEL77185.1| hypothetical protein bcere0027_14130 [Bacillus cereus AH676]
          Length = 434

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ +AI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQKAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|119505623|ref|ZP_01627694.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
 gi|119458566|gb|EAW39670.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
          Length = 604

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 76/244 (31%), Gaps = 10/244 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q +    +   A    + +L    T   A+  +      +G ++ A  Y       +P+
Sbjct: 149 AQASQQLGEQEQALGLFQSVLDGDPTNTVALNGMGISLKTLGYIDDAVNYLQAGAQQAPE 208

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           +P +   +      A     A+   ++  + +               L        + SY
Sbjct: 209 SPELYTNLASALAQADREDEAVAAYSRALELSPYDVDLHDWFNGY--LGVIAHPQYLDSY 266

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLL 303
             A+E      +++  +   A+ L+   +  +A+ +LE         P  E    Y +  
Sbjct: 267 RGALEQQ---PDNVGLATALARKLLLSGRGPEAQSVLEAARSAGGDRPSLETDLSYVYRE 323

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS-IDQAHAKAMLAMKIAP-RKEIF 361
                  L  A     +  +  +    ++   +  G    +A       ++  P  + ++
Sbjct: 324 QGFFSEALVSARSAARLAPQHPDVQRELATALMASGEGYGEALEILDTLLRSYPVDQGLW 383

Query: 362 LLLA 365
            L A
Sbjct: 384 ALCA 387



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 62/203 (30%), Gaps = 36/203 (17%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +  + G    A        D+   A    + +   +    + + A            
Sbjct: 13  LAAQKLKAGAPEEALAVLEPQRDLCAHAADFWQLLALAHKGMGDSAAAEAAFTSSIAIDP 72

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           + +    +  + RSL  A+      +     ++L L  + + A I  A++L+  N+   A
Sbjct: 73  QPHVLTNLANLHRSLRQAE-----TALAYYDQALALAPDHLPAQINRARALLDLNRYSDA 127

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                                         +L     + + N +   + + +++ + ++G
Sbjct: 128 ------------------------------RLA-FQTILQANPDHRNATLGLAQASQQLG 156

Query: 340 SIDQAHAKAMLAMKIAPRKEIFL 362
             +QA       +   P   + L
Sbjct: 157 EQEQALGLFQSVLDGDPTNTVAL 179


>gi|302878329|ref|YP_003846893.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302581118|gb|ADL55129.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
          Length = 1646

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 15/283 (5%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
            Y   Y  L   LM+ A   +  A K      + +    +    L    I   +     A
Sbjct: 266 RYAAAYSNLANTLMASA--ELAEAEKCCRRALEINPGAADAHSTL--GHIFEKQGDLAAA 321

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                  LQI       +  L       G L+ A     +AL   PD       +     
Sbjct: 322 EASFRRALQINPDSAADLSHLGSVLKAQGRLDEADICYRRALQFKPDYADAHYNLATLLK 381

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                  A     Q  +   ++           +     +  +  +     E+++L  + 
Sbjct: 382 EQGRPDEAENSYRQALRFNPDF----VYAYYNVANVLLSQSRLTEAESGYREAIRLKPDF 437

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRA 314
             A       L +  +  +AE    +  ++   P+ A  +++L         +   ++  
Sbjct: 438 AEAHNNLGIVLRALGRPAEAEASYLEAIRIQ--PDYAEAHSNLGITLHELGRSSDAVRSI 495

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +   I+    E+   +  + L +G   +A A    A++  P 
Sbjct: 496 NQALLISPMLAEAHCNLGNVLLGLGRQAEAQASYRRALQCDPD 538



 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 78/229 (34%), Gaps = 11/229 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A       +QI      A  +L        +L  A++   +AL+I+P A      
Sbjct: 248 GRASEAEACYRRAIQINPRYAAAYSNLANTLMASAELAEAEKCCRRALEINPGAADAHST 307

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +    + + A     +  +   +     A  L         +G +  +      +L
Sbjct: 308 LGHIFEKQGDLAAAEASFRRALQINPDS----AADLSHLGSVLKAQGRLDEADICYRRAL 363

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLK 312
           +   +   A    A  L  Q +  +AE    +  + N  P+    Y ++ +   +  +L 
Sbjct: 364 QFKPDYADAHYNLATLLKEQGRPDEAENSYRQALRFN--PDFVYAYYNVANVLLSQSRLT 421

Query: 313 RALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            A         +  +  E+   +  +   +G   +A A  + A++I P 
Sbjct: 422 EAESGYREAIRLKPDFAEAHNNLGIVLRALGRPAEAEASYLEAIRIQPD 470


>gi|218665177|ref|YP_002427136.1| TPR domain protein [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517390|gb|ACK77976.1| TPR domain protein [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 603

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 110/391 (28%), Gaps = 39/391 (9%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYA 177
           E L YLL  + A  +RQ  +A    +   ++             ++    GD   A + A
Sbjct: 83  EQLYYLLVAEFATVQRQPQLAIPAWQKAAKLAPEPNVLRR--ATQAIARFGDFQDALQLA 140

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +    +P +    +      +   +  +A+  L        +  +    + +  +    
Sbjct: 141 RRWRQAAPGSAEADQFEAALLLTTGQDEQALQLLQATLARFPDDPK----VTLQFAELLV 196

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292
             G    +             S  A     +  + + +   A   LEK   + P      
Sbjct: 197 THGRSGEARRLLSALADKDPKSAAAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAA 256

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +A     +        L+        + E+  +   ++ + L+MG + QA+       
Sbjct: 257 ISLAEALQAVQG--PAAALRSIQSFTASHPEATLARQYLAALYLQMGGLTQAYRLYQDMA 314

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYL---SSVWLPL 408
           +  P     LL   +   +  +  +       A + A   P+ +   G L      W   
Sbjct: 315 RQNPDDPDILLSLGLMDIDRKDWKRAESVLLRARNLAPQSPVPVYYLGRLYEAQDRWA-- 372

Query: 409 SPISKTLCYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
                     +W     S P Y + E  +  +E      D             P   ++ 
Sbjct: 373 -------EALQWYQRIHSGPLYPAVELRSARVEYLLGHHDKAIDKLRALAAAHPQDAQIP 425

Query: 468 SFEDSTIHPL-----------DPHIRQPDDP 487
             E   +              D   R P+ P
Sbjct: 426 LLEAGLLQDSGHLPQALQVINDALQRMPEQP 456



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 90/301 (29%), Gaps = 44/301 (14%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +       A ++      +  F ++  V L   ++ +   +   A   L  +        
Sbjct: 162 LTTGQDEQALQLLQATLAR--FPDDPKVTLQFAELLVTHGRSGEARRLLSALADKDPKSA 219

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A Y+L            A  +  KAL I PD      ++ +     +  + A+  +   
Sbjct: 220 AAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAAISLAEALQAVQGPAAALRSIQSF 279

Query: 215 KKNAKEWNRNRAIL------------------------------LIARSLENADKGDMIA 244
             +  E    R  L                              L++  L + D+ D   
Sbjct: 280 TASHPEATLARQYLAALYLQMGGLTQAYRLYQDMARQNPDDPDILLSLGLMDIDRKDWKR 339

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-------KVNPHPEIAN 297
           +    + +  L   S +      +   +Q++  +A       W        + P  E+ +
Sbjct: 340 AESVLLRARNLAPQSPVPVYYLGRLYEAQDRWAEALQ-----WYQRIHSGPLYPAVELRS 394

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                L  +    + +   L   + +  +  ++ + +  + G + QA      A++  P 
Sbjct: 395 ARVEYLLGHHDKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPE 454

Query: 358 K 358
           +
Sbjct: 455 Q 455



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 76/275 (27%), Gaps = 14/275 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L             A+   + M +             L        D   A+    +A +
Sbjct: 293 LAALYLQMGG-LTQAYRLYQDMARQNPDDPDILLSLGLMD--IDRKDWKRAESVLLRARN 349

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P +P     + + Y     W+ A+    Q+  +   +      + +  +      G  
Sbjct: 350 LAPQSPVPVYYLGRLYEAQDRWAEALQ-WYQRIHSGPLYP----AVELRSARVEYLLGHH 404

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +                  +  A  L       +A  ++    +  P  P +      
Sbjct: 405 DKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPEQPSLWYAQGA 464

Query: 302 LLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAPRK 358
           +  +  +     K    +  +     ++   +    +E    + +A      A+ ++P  
Sbjct: 465 IYEQLKDYPAMEKAMRTVIHLAPNHAQAYNFIGYSLVERHSDLAEAQKLLTKALSLSPDN 524

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
              L           + D+ L + Q A  A+PD  
Sbjct: 525 PEILDSVGWLYHARGDNDRALGYLQRAHAALPDEA 559


>gi|56963669|ref|YP_175400.1| hypothetical protein ABC1904 [Bacillus clausii KSM-K16]
 gi|56909912|dbj|BAD64439.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 427

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 69/187 (36%), Gaps = 19/187 (10%)

Query: 127 VQIALAERQYNIAHEKLEM-MLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +   AE++Y  A E L   M       A    A   LY +     D   A++Y  +A+ 
Sbjct: 252 ARAYEAEKRYEEAFETLAAGMRMDEFNDALPLLAGKLLYKQ----QDFVGAEQYLRQAIA 307

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P      + +       + +   +  +     +AK +    A+L+   +L + +    
Sbjct: 308 LNPTNTEALQTLAAFLREQERFDELLELVE----HAKSYGETDALLVWYEALAHKELEYY 363

Query: 243 IASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANI 298
             +     E   +     + +         L+ + ++ KA  + +K  + +P   +++ +
Sbjct: 364 ETAREKYKEAYIAFHEDADFLSE---YGHFLLEEGERNKAVELFQKALQQSPERSDLSEL 420

Query: 299 YTHLLSE 305
              L +E
Sbjct: 421 LDELQAE 427


>gi|324502359|gb|ADY41039.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Ascaris suum]
          Length = 1100

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 102/284 (35%), Gaps = 25/284 (8%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEVQIALAERQYNI 138
           GY  L   L++    ++  A  + +Y+S      +       L  LL+        +   
Sbjct: 170 GYINLAAALVA--GGDLEQA--VSAYLSALQYNPDLYCVRSDLGNLLKAM-----GRLEE 220

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A       ++       A  +L       G++  A  +  KA+ + P+       +    
Sbjct: 221 AKVCYLKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVL 280

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             A+ + RA+    +    A     N A++    +    ++G +  +     ++++L  N
Sbjct: 281 KEARIFDRAVAAYLRALNLAG----NHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPN 336

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317
              A    A +L  +    +AE        + P H +  N   ++  E   GK++ A RL
Sbjct: 337 FPDAYCNLANALKEKGLVEEAEKAYNTALALCPTHADSQNNLANIKRE--QGKIEEATRL 394

Query: 318 E----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                EI  E   +   ++ I  + G +  A      A++IAP 
Sbjct: 395 YLKALEIYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT 438



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 19/208 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A K ++        H +    L    I   + +   A       L+I      A 
Sbjct: 352 GLVEEAEKAYNTALALCPTHADSQNNL--ANIKREQGKIEEATRLYLKALEIYPEFAAAH 409

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I+P        +        +   A+    +  + 
Sbjct: 410 SNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCYTRAIQI 469

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI------ 271
              +    A      +  + D G++  +      +LKL  +   A    A  L       
Sbjct: 470 NPGF----ADAHSNLASIHKDSGNIPEAIQSYSTALKLKPDFPDAFCNLAHCLQIICDWT 525

Query: 272 -SQNKKRKAEVILEKIWK------VNPH 292
              N+ RK   I+E+  +      V+PH
Sbjct: 526 DYDNRMRKLVAIVEEQLEKKRLPSVHPH 553



 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 79/226 (34%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     KA+++ P+ P     +  
Sbjct: 287 DRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLAN 346

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                     A    N           ++  L    +    ++G +  +    +++L++ 
Sbjct: 347 ALKEKGLVEEAEKAYNTALALCPTHADSQNNL----ANIKREQGKIEEATRLYLKALEIY 402

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K + A    ++  ++ P    A+ Y+++ +      +  G L
Sbjct: 403 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT--FADAYSNMGNTLKEMGDIGGAL 460

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 461 QCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYSTALKLKPD 506



 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+   +   N  +V+     +   +   ++A +     +++      A  +L   
Sbjct: 288 RAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANA 347

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A++    AL + P        +        +   A     +  +   E+  
Sbjct: 348 LKEKGLVEEAEKAYNTALALCPTHADSQNNLANIKREQGKIEEATRLYLKALEIYPEF-- 405

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  + +   E++++      A      +L        A    
Sbjct: 406 --AAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCY 463

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  ++NP     H  +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 464 TRAIQINPGFADAHSNLASI--HKDSGNIPEAIQSYSTALKLKPDFPDAFCNLA 515


>gi|302340757|ref|YP_003805963.1| hypothetical protein Spirs_4296 [Spirochaeta smaragdinae DSM 11293]
 gi|301637942|gb|ADK83369.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 463

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 104/333 (31%), Gaps = 46/333 (13%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y+++ + L++        A  + ++        + +   LL   + ++  + + A E L+
Sbjct: 40  YESISSLLVA---GKPEEA--LEAFEKAYANDPDSFETALLRSGLLVSIGKTDEAKEALK 94

Query: 145 MMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
             L+     P             +   G+ N  +      ++ +PD      A+ + Y+ 
Sbjct: 95  TALEKEPDNPDALFTG----ALIAGLDGERNQEKALLESVVEKAPDHGRALAALGELYME 150

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAI--LLIARSLENADK------------------- 239
            KE+ +A     +  +   +    RA    L+ R  +  +                    
Sbjct: 151 DKEYDKAEDSFEKSIEAEPDNFVARAGYGNLLLRQKKYEESVEQLDKAVEAFPNYPFSYV 210

Query: 240 ---------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                    GD   +  D  ++++L        I   K  + + +  +A+       K++
Sbjct: 211 DRGKAKAGLGDTQDAITDLSKAIELDPEHYWHYIDRGKLYLYRGEIERAKADFTSAKKID 270

Query: 291 PHPEIANIYTHLLSENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P   ++ +Y   ++ +     G L       E   +   +    +  A        A   
Sbjct: 271 PDYFLSYVYLAGINSDEKNWSGALANYKATMERRPDYYYAYEPAATAAFLSEDYTWAAEM 330

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
              A +  P +  + L+  I    +    +   
Sbjct: 331 YQKAYENEPDEHGYALMHGISLFEAGKEQEAKA 363



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 46/116 (39%), Gaps = 3/116 (2%)

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            ++AE  ++   ++ P+  I+++      E     L+   +    + +S E+ ++ S + 
Sbjct: 24  TKEAEKAVQPEVEIPPYESISSLLVAGKPEEA---LEAFEKAYANDPDSFETALLRSGLL 80

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           + +G  D+A      A++  P     L    +        ++     +S +   PD
Sbjct: 81  VSIGKTDEAKEALKTALEKEPDNPDALFTGALIAGLDGERNQEKALLESVVEKAPD 136


>gi|294507615|ref|YP_003571673.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
 gi|294343942|emb|CBH24720.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
          Length = 681

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 88/320 (27%), Gaps = 45/320 (14%)

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQ 135
           R     Y A      + A+     A+   +    +   H          L+ ++  A  +
Sbjct: 386 RRARSMYDA------ATASSPPDTAQLRAAAGVLRDVLHQSPDTEAALSLQAELYQAWGR 439

Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
              A   +E +L   P      V        R      A   A +   + P    +    
Sbjct: 440 PEEAGRAMERLLDLTPRAPGRWVR-TAQTYQRAHLYARAAGVAEEGFLLFPGHMPLARTA 498

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIES 252
               +   + ++A            +       A+L     L  +  G    +      +
Sbjct: 499 AFARLRTGDPAKARRHFQDALSLLGDSTGAAAEAVLHAGLGLAKSRLGRPREADDALKNA 558

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
             L           A+SL  Q+ +      L++                         L 
Sbjct: 559 RALAPQHPQVVRLYARSLAHQDDR------LDQA------------------------LD 588

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQAN 371
            A +  E   +S  +   + ++      ++ A     +A+    P   +   L  +E A 
Sbjct: 589 LAEQAVENAPDSPSAHRALGQVQFRRDELEAARRHLRIALDAGGPSATLLERLGDVEAAL 648

Query: 372 SHNTDKILYWTQSALHAMPD 391
            ++T    YW Q AL   PD
Sbjct: 649 GNDTAAQTYW-QRALDRNPD 667



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 4/115 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A    E  L+        + +L       G L++A  YA +A       P     
Sbjct: 154 GDYEEAISHFEAALEQVPEAPVLLLALADAHEAQGALSTALFYARRAQTQGSPRPSPYRR 213

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           + +    A + + A+    Q   +    N        AR+   AD G    +   
Sbjct: 214 LAEMQRAAGDPAAALRTYQQLLDHVPNANDAHR----ARAAIQADLGRTKGAIQS 264


>gi|307578327|gb|ADN62296.1| tetratricopeptide repeat protein [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 398

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/389 (12%), Positives = 112/389 (28%), Gaps = 44/389 (11%)

Query: 60  AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107
               F     A L   +  R      G+  +         GL  + +     A ++    
Sbjct: 13  WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 72

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163
           + + ++       L +L   +      + + A    + + + P      + FA+ +L  +
Sbjct: 73  AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 127

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222
             + G L+ A+   T+   I   AP     ++  Y   ++W +AI   +  +    +   
Sbjct: 128 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVVTGEPMG 187

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +  A      +           +      + +    S+ + I   +          A   
Sbjct: 188 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRSGIIEGRIEADLGHHEAAVRA 247

Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333
            E+  + +P       P +   Y  +        +  A        E    +   + +++
Sbjct: 248 WERAARHDPEYLPEIIPSLLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 301

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391
           +        QA       +K  P       L  +  A+  +    LY  +     +   +
Sbjct: 302 LIESQEGPAQARVYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 361

Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417
           P +       G  +  W    P  K    
Sbjct: 362 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 388


>gi|193784770|dbj|BAG53923.1| unnamed protein product [Homo sapiens]
          Length = 531

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A       L++      A+ +L   +    D   A+ Y  +AL + P 
Sbjct: 139 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 195

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235
                  +       ++   AIT L    K   E+    + L    + +           
Sbjct: 196 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 255

Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                D G    +     +++KL  +  +A +   +   S  + 
Sbjct: 256 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 315

Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             AE   ++  +V  H      P  A  Y     E  +   + A     +     E  + 
Sbjct: 316 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 371

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388
           ++++   MG   +A       +       E + LL+ I      N DK L     AL   
Sbjct: 372 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 430

Query: 389 MPDP 392
             DP
Sbjct: 431 PKDP 434



 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+  +       A   +    +    H+  +V L   ++  +  + ++A E  +  LQ+ 
Sbjct: 272 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 329

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E  +  L       G    A +   +A  + P    +  A+ Q   +  +   A   
Sbjct: 330 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 387

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +     + +        LL A   +  +    + +   A++        I      ++  
Sbjct: 388 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 441

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++  + + + +L+K ++                              ++N +  ++ + 
Sbjct: 442 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 477

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +  I    G    A A    A+++ P  ++    LA++++  
Sbjct: 478 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 519


>gi|34498130|ref|NP_902345.1| cellulose synthase subunit C [Chromobacterium violaceum ATCC 12472]
 gi|34103985|gb|AAQ60345.1| cellulose synthase, subunit C [Chromobacterium violaceum ATCC
           12472]
          Length = 1270

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 27/267 (10%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV 194
            A EK+    + P        +   ++  + D  SA+     A + L+ +        A+
Sbjct: 543 AALEKIPEASRTPGMAALQRRAWLKQTLALADAESARGEGWRARRRLEEAEARLAGDGAL 602

Query: 195 VQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIAR-------SLENADKGDMI 243
           +     A     +  RA T +          +   A   +         +          
Sbjct: 603 LADVARAWQRMGDPDRARTLMRDACLAQPTADNELAYAGLLLDQKRLAEAEPALAALARN 662

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302
                A +   L D     ++  A+   +  + R+A+ IL +     P +P +       
Sbjct: 663 GQRLSAGQRQTLKDLLAGQALIRAEQARAAGQPRQADDILRQAALAAPDNPRLLRALAE- 721

Query: 303 LSENTVGKLK----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             +   G+      R  ++     +  E+ + +    +  G +  A + A L  +  P +
Sbjct: 722 -GDMASGRWDAARGRLDKILAARPDDDEARLALLDADIGAGRLGAARSGADLLSQPKPGR 780

Query: 359 ------EIFLLLAQIEQANSHNTDKIL 379
                  +   +A +  A+  +++   
Sbjct: 781 DADFMLRVLSRMAALGDADRVDSELAR 807


>gi|323138833|ref|ZP_08073896.1| ATP synthase F0, A subunit [Methylocystis sp. ATCC 49242]
 gi|322395875|gb|EFX98413.1| ATP synthase F0, A subunit [Methylocystis sp. ATCC 49242]
          Length = 525

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 5/188 (2%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++        R +  Y           L  L   +   A +Q++ A      +L I  T+
Sbjct: 117 ALFYDKGARERAITDYTQALAFQPRFVLALLRRAEAFRAGKQWDAAIADYRRVLDIDPTQ 176

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A           GD++ A    T+A+  +P +  +       +    E   A+   ++
Sbjct: 177 VEAYVGRGDAYLAKGDVDRALSDVTEAIGRAPKSAELYWKRGTLFRSKGELDNALRDFSE 236

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +   E  + R      R+     +G++  +  D   +L++      A I A+ +L   
Sbjct: 237 AIQLNPELLQARV----DRADMYRAQGNLPLARQDLEAALRVDPEFRPA-IEASATLSKL 291

Query: 274 NKKRKAEV 281
            + +KA  
Sbjct: 292 VEAQKAVR 299



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 16/227 (7%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             +     +   ++    L  G    AA ++  A         +H    +          
Sbjct: 61  GSIIAGRRESKSNRIAAYLNRGEAYRAAGDLDRA-----IADVEHALQLDPKSAQAYADR 115

Query: 130 ALA---ERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDIS 184
           A     +     A     + +   P      +     E+ R G   ++A     + LDI 
Sbjct: 116 AALFYDKGARERAITDYTQALAFQPRFVLALLR--RAEAFRAGKQWDAAIADYRRVLDID 173

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P            Y+   +  RA++ + +    A +     A L   R      KG++  
Sbjct: 174 PTQVEAYVGRGDAYLAKGDVDRALSDVTEAIGRAPKS----AELYWKRGTLFRSKGELDN 229

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +  D  E+++L    + A +  A    +Q     A   LE   +V+P
Sbjct: 230 ALRDFSEAIQLNPELLQARVDRADMYRAQGNLPLARQDLEAALRVDP 276



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GDL+ A      AL + P      +A   +  L  +   A          A  +   
Sbjct: 86  RAAGDLDRAIADVEHALQLDPK---SAQAYADRAALFYD-KGARERAITDYTQALAFQPR 141

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             + L+ R+          A+  D    L +    + A +    + +++    +A   + 
Sbjct: 142 FVLALLRRAEAFRAGKQWDAAIADYRRVLDIDPTQVEAYVGRGDAYLAKGDVDRALSDVT 201

Query: 285 KIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +       P+ A +Y                L+      ++N E +++ V  + +    G
Sbjct: 202 EAIGRA--PKSAELYWKRGTLFRSKGELDNALRDFSEAIQLNPELLQARVDRADMYRAQG 259

Query: 340 SIDQAHAKAMLAMKIAPRKE 359
           ++  A      A+++ P   
Sbjct: 260 NLPLARQDLEAALRVDPEFR 279


>gi|269139428|ref|YP_003296129.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202]
 gi|267985089|gb|ACY84918.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202]
 gi|304559324|gb|ADM41988.1| predicted periplasmic heat shock protein YciM precursor
           [Edwardsiella tarda FL6-60]
          Length = 389

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 85/260 (32%), Gaps = 19/260 (7%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+   ++ +D +     
Sbjct: 83  GEVDRAIRIHQSLMESASLSFEQRLLAVQQLGRDYMAAGLYDRAEEMFSQLVDEADFRVS 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W +AI    +  +  K+  R   A      +L+     D+  +   
Sbjct: 143 ALQQLLLIHQATSDWHKAIDAAEKLVRLGKDQQRGEIAHFYCELALQAMGSDDLDRAQSL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIANIYTHL 302
             ++          SI   +   +  +  KA      +LE  K +     P +   Y  L
Sbjct: 203 LKKAAAADKGCARVSIMRGRVFQALGEPAKAVAAFSQVLEQDKAFVSEVLPLMETCYQAL 262

Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS-IDQAHAKAMLAMKIAPRKEI 360
              E     L+R      +++++  S  ++    +E    ++ A       ++  P   +
Sbjct: 263 GQPEPWHDFLRRC-----VDEDAGASAELMLGQVIEAQEGLEAAQVYVSRQLQRHPTMRV 317

Query: 361 FLLLAQIEQANSHNTDKILY 380
           F  L     A      +   
Sbjct: 318 FHRLIDYHLAE-AEDGRARE 336


>gi|58581806|ref|YP_200822.1| tetratricopeptide repeat protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623710|ref|YP_451082.1| hypothetical protein XOO_2053 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188576637|ref|YP_001913566.1| tetratricopeptide repeat protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58426400|gb|AAW75437.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367650|dbj|BAE68808.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521089|gb|ACD59034.1| heat shock protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 392

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 91/303 (30%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI    + ++   +   +  +      +  N   G    +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEQVTGEPMGKLISQFECELADRNRGLGKTDDALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +    +     A    E+  + +P       P +   Y  +
Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
              +       A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GDISG------ARNFLSEMTEHYRGIAPVLALTQLIEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L  +  A   +    L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|332859016|ref|XP_001152053.2| PREDICTED: pre-mRNA-processing factor 6 isoform 3 [Pan troglodytes]
          Length = 939

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 577 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 634

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 635 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 694

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 695 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 754

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 755 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 812

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 813 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 870

Query: 391 D 391
           D
Sbjct: 871 D 871



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 286 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 342

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 343 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 394

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 395 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 447

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 448 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 493


>gi|332262339|ref|XP_003280218.1| PREDICTED: pre-mRNA-processing factor 6 isoform 1 [Nomascus
           leucogenys]
          Length = 941

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMERAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|323934090|gb|EGB30532.1| cellulose synthase operon protein C [Escherichia coli E1520]
          Length = 1109

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 304 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 361

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 362 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 421

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 422 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 481

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 482 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNNNIQELVNRLQSDQV---LETANRLRES 538

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 539 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 592

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 593 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 644



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 536 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 595

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 596 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 655

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 656 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 690



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 209 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 263

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 264 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 323

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 324 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 367


>gi|189067252|dbj|BAG36962.1| unnamed protein product [Homo sapiens]
          Length = 941

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARTMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|40807485|ref|NP_036601.2| pre-mRNA-processing factor 6 [Homo sapiens]
 gi|24212088|sp|O94906|PRP6_HUMAN RecName: Full=Pre-mRNA-processing factor 6; AltName: Full=PRP6
           homolog; AltName: Full=U5 snRNP-associated 102 kDa
           protein; Short=U5-102 kDa protein
 gi|7658291|gb|AAF66128.1|AF221842_1 U5 snRNP-associated 102 kDa protein [Homo sapiens]
 gi|4164166|dbj|BAA37140.1| unnamed protein product [Homo sapiens]
 gi|12804511|gb|AAH01666.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo
           sapiens]
 gi|55664585|emb|CAH71582.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo
           sapiens]
 gi|55958583|emb|CAC16610.2| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo
           sapiens]
 gi|56203967|emb|CAI21906.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo
           sapiens]
 gi|119595580|gb|EAW75174.1| chromosome 20 open reading frame 14, isoform CRA_a [Homo sapiens]
 gi|261858980|dbj|BAI46012.1| PRP6 pre-mRNA processing factor 6 homolog [synthetic construct]
          Length = 941

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L]
 gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L]
          Length = 421

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 65/210 (30%), Gaps = 31/210 (14%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  +  R GDLN A     KAL+I+P+                +   A+    Q  + 
Sbjct: 8   RGI--DKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQALQI 65

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E       +   R L     GD   +  DA + LK+  N   A      +       +
Sbjct: 66  NSESIE----VYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQ 121

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI--- 334
            A    ++          A +Y      +   KL     LE IN+   + ++ + +    
Sbjct: 122 AAIASFKQA---------AQLYL-----DQQDKLNCRRCLESINQIQQQQILALGRAQTN 167

Query: 335 -----ALEMGSIDQAHAKAML---AMKIAP 356
                A+   +  +           +++ P
Sbjct: 168 DFCHQAINKVNTGKYREALEDFNWLLEVDP 197



 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 78/264 (29%), Gaps = 39/264 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
                        A       LQI   +   +    L   +   GD   A   A + L I
Sbjct: 42  RAMARFDLGDQQGALADYTQALQINSESIEVYFGRGLARLAL--GDATGAIEDANQILKI 99

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNR---------NRAIL 228
           +P+ P   +     Y    +   AI    Q       +++     R          + IL
Sbjct: 100 NPNQPAACKLQGSAYRKLGDNQAAIASFKQAAQLYLDQQDKLNCRRCLESINQIQQQQIL 159

Query: 229 LIARS---------LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            + R+         +   + G    +  D    L++   +  A              R+A
Sbjct: 160 ALGRAQTNDFCHQAINKVNTGKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRA 219

Query: 280 EVILEKIWKVNP-------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
              L +  ++NP       H  +      +   +  G +    +L + N E+ + L+   
Sbjct: 220 IQDLGQAMELNPQDAQVRYHRGL----VRIELGDYRGAIDDLTKLLQSNPENRDVLIHRG 275

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
              ++MG   QA       + + P
Sbjct: 276 NAYIQMGDYRQAIEDYSRVITLKP 299


>gi|300922355|ref|ZP_07138477.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|301326679|ref|ZP_07220003.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
 gi|300421295|gb|EFK04606.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|300846654|gb|EFK74414.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
          Length = 1157

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|229172256|ref|ZP_04299820.1| hypothetical protein bcere0006_13700 [Bacillus cereus MM3]
 gi|228611244|gb|EEK68502.1| hypothetical protein bcere0006_13700 [Bacillus cereus MM3]
          Length = 420

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITHYESLLAEHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 294

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340
           +K                L   +    LK A  L+E  K   E L+ V + A++ G    
Sbjct: 295 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 339

Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362
               D A AK  L M        +  + 
Sbjct: 340 QLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|218702295|ref|YP_002409924.1| cellulose synthase subunit BcsC [Escherichia coli IAI39]
 gi|218372281|emb|CAR20144.1| cellulose synthase subunit [Escherichia coli IAI39]
          Length = 1157

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  G+   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGEPTQALETYKDAM 738


>gi|256020877|ref|ZP_05434742.1| cellulose synthase subunit BcsC [Shigella sp. D9]
 gi|332282091|ref|ZP_08394504.1| cellulose synthase subunit [Shigella sp. D9]
 gi|332104443|gb|EGJ07789.1| cellulose synthase subunit [Shigella sp. D9]
          Length = 1157

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIHELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|193061654|ref|ZP_03042751.1| cellulose synthase operon protein C [Escherichia coli E22]
 gi|194428684|ref|ZP_03061221.1| cellulose synthase operon protein C [Escherichia coli B171]
 gi|218556081|ref|YP_002388994.1| cellulose synthase subunit BcsC [Escherichia coli IAI1]
 gi|300907574|ref|ZP_07125210.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|301306689|ref|ZP_07212746.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|192932444|gb|EDV85041.1| cellulose synthase operon protein C [Escherichia coli E22]
 gi|194413267|gb|EDX29552.1| cellulose synthase operon protein C [Escherichia coli B171]
 gi|218362849|emb|CAR00479.1| cellulose synthase subunit [Escherichia coli IAI1]
 gi|300400691|gb|EFJ84229.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|300838082|gb|EFK65842.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|315254055|gb|EFU34023.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1]
 gi|320198343|gb|EFW72946.1| Cellulose synthase operon protein C [Escherichia coli EC4100B]
 gi|323160574|gb|EFZ46515.1| cellulose synthase operon protein C [Escherichia coli E128010]
          Length = 1157

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|15639938|ref|NP_219391.1| hypothetical protein TP0954 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026177|ref|YP_001933949.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum
           SS14]
 gi|3323274|gb|AAC65909.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018752|gb|ACD71370.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060309|gb|ADD73044.1| putative tetratricopeptide repeat protein [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 478

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 50/297 (16%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRI 167
             +      YL  L+         +   A E  E + Q   T    V   Y  +      
Sbjct: 74  RAEKRIQYLYLSTLISA------GKLTHAQELAEKLGQDGPTASETVQLWYAHAMIAQAK 127

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            D+   ++Y  K L   P   W        ++   ++++A+   ++  +        R  
Sbjct: 128 RDVRKKKQYVEKILAQDPHDLWALTERGYDFLSVNDYAQAVQAFSRALRVEPRAQDARV- 186

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                      +G M  +     + L+       A    A+     N+  +A   LE++ 
Sbjct: 187 ---GLGKVYYLQGKMQEAEAQYRQVLQDTPEHERALAECARVKAETNRVLEAIRDLERVV 243

Query: 288 KVNPH-P----EI------------------------ANIY-THLLSENTVGKLKRALRL 317
           +++PH P    ++                        A+ Y  H+       +L RA + 
Sbjct: 244 QLDPHDPAYWTDLGTYLSQAGKKERAAAAFERAVALSADAYFAHIYLGGIYDELGRAEKA 303

Query: 318 -------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
                   ++  +   S   +  +  E    ++A      A+  AP    + L+  +
Sbjct: 304 IEHYQRAVQLYPKYHFSFESLGVLFWEQQRWEEAREAFATALTYAPTNISYALMTAL 360



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 77/235 (32%), Gaps = 15/235 (6%)

Query: 178 TKALDIS---PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            +A  +    P+  +  +  +   +  + W  A+   +          +    L ++  +
Sbjct: 32  ERAQLLKSENPNIRFAAQ--LSGLLEKQRWEEALQLFDT-LSPEHRAEKRIQYLYLSTLI 88

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                           +       ++      A    ++   RK +  +EKI   +PH +
Sbjct: 89  SAGKLTHAQELAEKLGQDGPTASETVQLWYAHAMIAQAKRDVRKKKQYVEKILAQDPH-D 147

Query: 295 IANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           +  +    Y  L   +    ++   R   +   + ++ V + K+    G + +A A+   
Sbjct: 148 LWALTERGYDFLSVNDYAQAVQAFSRALRVEPRAQDARVGLGKVYYLQGKMQEAEAQYRQ 207

Query: 351 AMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL-WISDDGYLS 402
            ++  P  +      A+++   +   + I    +  +     DP  W     YLS
Sbjct: 208 VLQDTPEHERALAECARVKAETNRVLEAIRD-LERVVQLDPHDPAYWTDLGTYLS 261


>gi|260857634|ref|YP_003231525.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368]
 gi|260870256|ref|YP_003236658.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128]
 gi|257756283|dbj|BAI27785.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368]
 gi|257766612|dbj|BAI38107.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128]
 gi|323154038|gb|EFZ40244.1| cellulose synthase operon protein C [Escherichia coli EPECa14]
          Length = 1140

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398


>gi|316971980|gb|EFV55688.1| Pre-mRNA-processing factor 6 [Trichinella spiralis]
          Length = 953

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 16/262 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-WVT 191
           +   NI     +           AV           +   A+    KA D +P A  W+ 
Sbjct: 637 QGSRNILARAFQANPNSEDIWLAAV----KLESENSEYERARLLLKKARDTAPTARIWMK 692

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A ++  +   +   A+  + Q  +   E  +   ++    +     KGD+ ++     E
Sbjct: 693 SAKLEWCLNELD--EALDLIKQGVEMYPESEKLWMMVGQLYAS----KGDVESARKAYAE 746

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310
            LK C   I   I AA+    Q+   +A  +LEK    NP +P +      +      G+
Sbjct: 747 GLKHCSGCIAMWILAAQFEEEQDCFIRARALLEKARLKNPKNPSLWLAAIRIEQRGGFGE 806

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQ 369
               L    +  +   + ++ ++ A+++ S     +K++ A++       + L ++++  
Sbjct: 807 AALNLLARALQ-DCPNAGLLWAE-AIQIESRPARKSKSVDALRKCEHDPHVLLAVSKLFW 864

Query: 370 ANSHNTDKILYWTQSALHAMPD 391
           +     +K   W    +   PD
Sbjct: 865 SERK-VNKAREWFNRTVKVEPD 885


>gi|52425528|ref|YP_088665.1| hypothetical protein MS1473 [Mannheimia succiniciproducens MBEL55E]
 gi|52307580|gb|AAU38080.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 398

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 84/264 (31%), Gaps = 58/264 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151
             +  A ++H  + +   +  E    LL  Q     + +      + A     M++  P 
Sbjct: 91  GEVDRALRIHQNLDRSSYYTFEQ--KLLAKQ--QLAKDFMSVGFFDRAETLYIMLVDEPE 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                                   +A  AL           AV+ Q     +W +AI   
Sbjct: 147 ------------------------FAEGALQ--------QLAVIYQKTK--DWKKAINVA 172

Query: 212 NQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +  K + +E N   A      +    ++           ++L +  + + AS+     L
Sbjct: 173 EKLAKISPQEDNIELAQYYCEYARTLGEESKE-QPKEILQQALTVSPSCVRASMLLGDFL 231

Query: 271 ISQNKKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEEINKE 323
           I + +  KA  +LE        +     P++   Y HL   +     L RA +  + N  
Sbjct: 232 IQEEQYAKAVPVLENVLTQNASYVGEVLPQLKECYQHLNQLDNFELFLIRANQEYKHN-- 289

Query: 324 SVESLVIVSKIALEMGSIDQAHAK 347
              S V ++   L      +A A+
Sbjct: 290 ---SSVALALADLIAEQDGRAAAQ 310


>gi|191165276|ref|ZP_03027119.1| cellulose synthase operon protein C [Escherichia coli B7A]
 gi|300815254|ref|ZP_07095479.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|309796168|ref|ZP_07690579.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|331679608|ref|ZP_08380278.1| cellulose synthase operon protein C [Escherichia coli H591]
 gi|190904678|gb|EDV64384.1| cellulose synthase operon protein C [Escherichia coli B7A]
 gi|300532146|gb|EFK53208.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|308120229|gb|EFO57491.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|331072780|gb|EGI44105.1| cellulose synthase operon protein C [Escherichia coli H591]
          Length = 1157

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|168701390|ref|ZP_02733667.1| TPR domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 675

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 15/273 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
             + +  + ++  A   +  +      H   L  L    I       + A       L  
Sbjct: 10  RAVAAHRSGSLDEAEHGYRQLLTATPNHPPALTNL--AAIVAQRGDADEAERLYLESLGA 67

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAI 208
              +    ++L     R G    A  +   AL +SPDAP      +         W R++
Sbjct: 68  DPDQLNTHFNLANLYRRTGRSADAIPHYEDALRLSPDAP-AVLVNLGLAAGDVGNWPRSV 126

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               +      +      + L+  +L  A  G    +     E++    +          
Sbjct: 127 ECFARAVTVNPDVP--EGLTLLGDAL--ARCGRRAEAIGAFREAVARFPDQPRGYCHLGL 182

Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKE 323
            L +  +  +A  +LEK  ++   +PE    +   Y  +   +   +  RA    E+   
Sbjct: 183 HLAATGEHEQAVEVLEKAVELRADYPEAQNALGVAYEAVGRADEAQRAYRAA--VELRDG 240

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             ++   +     E G + +A A    A+ +AP
Sbjct: 241 FADAWANLGTSLGEQGRVGEAVAALRKALDLAP 273



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 6/195 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY 158
              A  +  Y        +   V +     A     +  + E     +   P   E  + 
Sbjct: 86  GRSADAIPHYEDALRLSPDAPAVLVNLGLAAGDVGNWPRSVECFARAVTVNPDVPE-GLT 144

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     R G    A     +A+   PD P     +        E  +A+  L +  +  
Sbjct: 145 LLGDALARCGRRAEAIGAFREAVARFPDQPRGYCHLGLHLAATGEHEQAVEVLEKAVELR 204

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            ++   +  L +A        G    +      +++L D    A      SL  Q +  +
Sbjct: 205 ADYPEAQNALGVAY----EAVGRADEAQRAYRAAVELRDGFADAWANLGTSLGEQGRVGE 260

Query: 279 AEVILEKIWKVNPHP 293
           A   L K   + P+P
Sbjct: 261 AVAALRKALDLAPNP 275



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 7/134 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L  R++     G +  + H   + L    N   A    A  +  +    +AE +  +   
Sbjct: 7   LFQRAVAAHRSGSLDEAEHGYRQLLTATPNHPPALTNLAAIVAQRGDADEAERLYLESLG 66

Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            +P     H  +AN+Y    +  +   +        ++ ++   LV +   A ++G+  +
Sbjct: 67  ADPDQLNTHFNLANLYR--RTGRSADAIPHYEDALRLSPDAPAVLVNLGLAAGDVGNWPR 124

Query: 344 AHAKAMLAMKIAPR 357
           +      A+ + P 
Sbjct: 125 SVECFARAVTVNPD 138


>gi|119477999|ref|ZP_01618099.1| TPR domain protein [marine gamma proteobacterium HTCC2143]
 gi|119448912|gb|EAW30154.1| TPR domain protein [marine gamma proteobacterium HTCC2143]
          Length = 747

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 86/268 (32%), Gaps = 45/268 (16%)

Query: 117 HNEYLVYLLEVQIALAERQYN------IAHEKLEMMLQIPATREFAVYSL--YFESCR-- 166
           ++     ++         QY        A   LE     P  R  A+  L       R  
Sbjct: 464 NDAAQTVMVRASALQMLGQYQHQYGINTAITLLES--PDPLVRLAALRVLNGMTLQQRMT 521

Query: 167 -----IGDL------NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                + D        +A+  A   L  S  A    +         ++  RAI    +  
Sbjct: 522 TLWPMLEDPVLAVRIEAARLLAGVGLRGSMRAALSPD-------RQQQLDRAIKEYIESV 574

Query: 216 KNAKEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K+  +       + ++ ++L  AD+    A+Y  A+    L  + I A +  A    +Q 
Sbjct: 575 KSNADAPSGQLQLGVLYQALGRADEAK--AAYEHALV---LEPDFIPAMLNLADWYRAQG 629

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESL 328
           + ++A   L+K  +V P     +  I  +Y  L +       L++A  L     +     
Sbjct: 630 QDQRALPQLQKALRVLPDNIDANYAIGLLYIRLKNLGLATESLQKAASLA---PDISHYS 686

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + +    E G  + A       +   P
Sbjct: 687 YVYAVALFESGKREWAITSLKQTLNRHP 714


>gi|150397854|ref|YP_001328321.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
           WSM419]
 gi|150029369|gb|ABR61486.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
           WSM419]
          Length = 634

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 74/227 (32%), Gaps = 37/227 (16%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAIL 228
           A+R   KA+++ P+       + +     ++W        + L+   K A   + N A  
Sbjct: 367 ARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLKSILDMSAK-ALALDPNLAEA 425

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
             +R L     G    +  +  ++L L  +   A++   + L +Q + ++A    E+   
Sbjct: 426 HASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFFERA-- 483

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES-LVIVSKIALEMGSIDQAH-- 345
                        + S++              +   +    + + +   E      A   
Sbjct: 484 -----------AEIRSDD------------YFSPIHLMGCHLSLGR---EAERQRWARIG 517

Query: 346 -AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             +A  A++  P          +  A+    ++   W   AL   PD
Sbjct: 518 IERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALATDPD 564



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 23/167 (13%)

Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI------S 184
           + Q   A  +    +   P+  E  +Y   +  +   G    A  +  +A +I      S
Sbjct: 436 DGQTEEASREFRQALALDPSLYEANLYYGRFLFAQ--GRFQEAIGFFERAAEIRSDDYFS 493

Query: 185 PDAPWVTEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           P         + +    + W+R     A   L +  +NA   +R         +L  A  
Sbjct: 494 PIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHR--------GALALAHM 545

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           G+   +      +L    + ++A   AA       +  +A  +LE +
Sbjct: 546 GEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALELLETV 592


>gi|320038307|gb|EFW20243.1| DnaJ and TPR domain-containing protein [Coccidioides posadasii str.
           Silveira]
          Length = 535

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 16/166 (9%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------E 192
           A   L    Q P          Y +    GD   A ++  +AL + PD+          +
Sbjct: 246 AMSLLRENSQDPDALFLRGRLFYLQ----GDNEQAIKHFKRALSLDPDSTETVKYLRMVQ 301

Query: 193 AVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            +++          A+ +  AI       +         + LL  R+  + +  +   + 
Sbjct: 302 KLLRHKDEGNAAFKARRYREAIKLYTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAI 361

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            D  ++L+L      A    AK+        KA   L+ I + NPH
Sbjct: 362 EDCTKALELDPTYSKAKRVRAKAYGGTGDWEKALNELKSIAESNPH 407


>gi|110643777|ref|YP_671507.1| cellulose synthase subunit BcsC [Escherichia coli 536]
 gi|110345369|gb|ABG71606.1| hypothetical protein YhjL [Escherichia coli 536]
          Length = 1157

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQTAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|94971753|ref|YP_593801.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553803|gb|ABF43727.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 718

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 76/267 (28%), Gaps = 17/267 (6%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           A  +  A K++  V +    + E L  L  L  QI     +   A   +  +L +     
Sbjct: 42  AGRLQPAAKIYEQVLRGDPNNVEALHSLSILASQI----GETATAERLMRQVLSLQPEHV 97

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+ +L       G    A     K + + P        +    +   +  +AI    + 
Sbjct: 98  GALSNLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRA 157

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                ++    A            +G+   +      ++        A       L    
Sbjct: 158 LDLKPDY----ADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMG 213

Query: 275 KKRKAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           +   A    E+         +P   +          +    ++   +   +    VE+  
Sbjct: 214 ETSAAIEAFERAIALRAEYADPLNNLGVALQEQGRMSAA--VEHYHQAIALRPADVEAHF 271

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +     E+   D+A A    A++I P
Sbjct: 272 NLGSALQELHRTDEAIAAYQSALEIQP 298



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 15/198 (7%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +IA +   +A + H      H   +  L  L   Q          A    +  L +    
Sbjct: 116 AIACYEKVIALRPH------HAEAHNNLGNLRLAQ-----GDLEQAIASYQRALDLKPDY 164

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A Y+L     R G+   A+    +A+   P+ P     +        E S AI    +
Sbjct: 165 ADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMGETSAAIEAFER 224

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 E+    A  L    +   ++G M A+     +++ L    + A      +L   
Sbjct: 225 AIALRAEY----ADPLNNLGVALQEQGRMSAAVEHYHQAIALRPADVEAHFNLGSALQEL 280

Query: 274 NKKRKAEVILEKIWKVNP 291
           ++  +A    +   ++ P
Sbjct: 281 HRTDEAIAAYQSALEIQP 298


>gi|158320436|ref|YP_001512943.1| TPR repeat-containing protein [Alkaliphilus oremlandii OhILAs]
 gi|158140635|gb|ABW18947.1| TPR repeat-containing protein [Alkaliphilus oremlandii OhILAs]
          Length = 312

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 64/187 (34%), Gaps = 10/187 (5%)

Query: 109 YVSQQHT-FHNEYLVYLLEVQIALAE---RQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           Y+   H    NE +  LLE  IAL +        A E    +L+I        Y L    
Sbjct: 31  YMKAYHCRGGNEDIDLLLE--IALLQDELNNEEAAKEFYTKILEIDGNEARGHYGLGTIY 88

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD + A  Y  KA+++ P        +   Y    +  RAI    QK          
Sbjct: 89  DNQGDFSKAIEYYKKAIELDPYYEEAYFFLANAYDEIGDKDRAIE-YYQKTIEINPLEFW 147

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A + +    E  D+     +  +  ++L +   +  A       L  Q +K +A    E
Sbjct: 148 -AYVNLGSIYEELDRNKESLAMME--KALDIEPTNFKALFNMGVILNKQGEKLEAIQYYE 204

Query: 285 KIWKVNP 291
              + NP
Sbjct: 205 AAIEENP 211


>gi|327272790|ref|XP_003221167.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like
           [Anolis carolinensis]
          Length = 917

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 67/194 (34%), Gaps = 24/194 (12%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A+   +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARVAPNHLNVYINLANLIRANDSRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA----EVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
            L+  NK  +A       LE       +W       +A +Y  L   +    LK   R  
Sbjct: 572 LLLKMNKPLQAKEAYLRALELDRTNADLWYN-----LAIVYIELK--DPTEALKNFNRAL 624

Query: 319 EINKES----VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH 373
           E+N         S +++ +   +     +A  + +  +K  P     +  L  +   +  
Sbjct: 625 ELNPNHKLALFNSALLMQESG-DARLRPEARKRLLDYVKEEPQDANGYFNLGMLAMDDKK 683

Query: 374 NTDKILYWTQSALH 387
           +  +   W + A+ 
Sbjct: 684 D-AEAETWMKKAIK 696



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 7/150 (4%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVVQ 196
           A E     L++  T     Y+L      + D   A +   +AL+++P+        A++ 
Sbjct: 582 AKEAYLRALELDRTNADLWYNLAIVYIELKDPTEALKNFNRALELNPNHKLALFNSALLM 641

Query: 197 QYVLAKEWS-RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q          A   L    K         A       +   D      +     +++KL
Sbjct: 642 QESGDARLRPEARKRLLDYVKEEP----QDANGYFNLGMLAMDDKKDAEAETWMKKAIKL 697

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285
                 A    A       K+ KA  +LE+
Sbjct: 698 QAGFRSALFNLALLYSQTAKELKALPVLEE 727


>gi|229084624|ref|ZP_04216893.1| hypothetical protein bcere0022_12570 [Bacillus cereus Rock3-44]
 gi|228698700|gb|EEL51416.1| hypothetical protein bcere0022_12570 [Bacillus cereus Rock3-44]
          Length = 420

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 88/277 (31%), Gaps = 51/277 (18%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +     E ++     ++  ++ +   A    + +L           A+  L   
Sbjct: 121 QKLLKAKEMMPEEPVITFGLAELYSSKGEEQKAIAYYQALLSDHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVV------QQYVLAKEWSRAITFLNQKKKN 217
              IG+   A  Y  + L    D   +           +       W           K 
Sbjct: 180 LSAIGNWEEAITYYEEGLAEQKDIHSLFGYAFTLYQGEEYQRSIGAW-----------KE 228

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            KE +   A L +  +     +G +  SY    E +K+ + S+   +  A       K  
Sbjct: 229 LKELDPEYASLYMYLAKCYEKEGMLQESYETLHEGIKIDELSVPLYVELANIAAKIGKLT 288

Query: 278 KAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +AE +L+K  +++P H  +  I  Y ++L E                 E  E L+ V + 
Sbjct: 289 EAEELLQKALQLDPGH--LGAILKYAYILKEQ----------------EKYEELIAVVEN 330

Query: 335 ALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           A++ G        D A AK  L M        +  + 
Sbjct: 331 AMDSGEQDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|50085935|ref|YP_047445.1| putative signal peptide [Acinetobacter sp. ADP1]
 gi|49531911|emb|CAG69623.1| conserved hypothetical protein; putative signal peptide
           [Acinetobacter sp. ADP1]
          Length = 567

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 63/163 (38%), Gaps = 2/163 (1%)

Query: 231 ARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            R+L+   +  D+ A+   A   +      + A    A   +  ++ + A   L+KI  +
Sbjct: 81  QRALDIALEYNDLKAALDIATHWVVQEPEDVPAMFYLAHIALRAHEYKLAANTLDKILNI 140

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           +P+ ++  I   +  E+   +      L     KE+   LV+++ +  + G +  A    
Sbjct: 141 DPNADLEQILAGIAPESKEDRENLLETLKTSKEKENPSILVMIAGLEAQNGHLQDALINT 200

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A++  P+   F+L+        ++ +    W   +     D
Sbjct: 201 NRALRKRPKVTGFILMKANLLIGLNDIEGAQKWYAKSSKRHRD 243



 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 30/302 (9%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
             L KR    G+  +   L+ I  ++I  A+K ++  S++H  + +  + L E +  +  
Sbjct: 202 RALRKRPKVTGFILMKANLL-IGLNDIEGAQKWYAKSSKRHRDNLD--IRLAEARFLIRH 258

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +  +A +KLE +++        +  A   L   S  +     A++Y    +D+   A +
Sbjct: 259 NESELALKKLEDIIKTWPDAEDAKFIA--GL--TSIDLKQYEKAEQY---LVDLRYSAKY 311

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             +A     V A+   +         +  +   +  +R  L+         +G++  +  
Sbjct: 312 QNDAYYYLAVNAER-KQHFETAKAYYRLVDGSLYVVSRRNLVSI----FEKQGNLNDALR 366

Query: 248 DAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK-VNPHPEIANIYTHLL-- 303
              +              A A+ L     K+ A  +L++  K ++  PE+  IY  +L  
Sbjct: 367 FLTQERVNYPQHASFLYQAQAEILKKTGNKKAALRLLDEAIKNISDDPEL--IYAEVLLL 424

Query: 304 -SENTVGKLKR-ALRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEI 360
              +   KL R   +L  I   S   L   +  +AL+   +D+A   A LA++ AP +  
Sbjct: 425 DPFSDRDKLDRTLKQLLLIEPNSPTYLNAYAYTLALQNRRLDEARQYAELALEYAPEQAS 484

Query: 361 FL 362
            L
Sbjct: 485 IL 486


>gi|317486414|ref|ZP_07945241.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
 gi|316922324|gb|EFV43583.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
          Length = 589

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 88/270 (32%), Gaps = 13/270 (4%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRI 167
            V    T  N    ++      +  R+ + A   LE  ++        ++ L  E+    
Sbjct: 94  AVKLLLTLENRPQPFIDAAAWLMLNRETSEARSLLEQAVKRVPGD-LGLHLLLAETWLEQ 152

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A +   +     PD+  V + +   YV    +  A    +   +  +      A 
Sbjct: 153 GDNEQALKILKEYRKQRPDSELVQQELGILYVKTGHFKDADKVFSALPQRLRTSFVRYAH 212

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                +           +      +++     + A    A+ L +  +  +A  I   + 
Sbjct: 213 -----AQALVGLKQPHRAIQQLRLAVQESPEFVDAWFELARLLEADRQFSEANEIYNSLI 267

Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           + +P +P+I      +  +   GK ++AL        +    +  + + L+     +A A
Sbjct: 268 EQDPDNPDIWI--RMVEGQIRAGKGQKALDYALNGPATYGYKLTAATLFLDARMYPEAEA 325

Query: 347 KAMLAMKIAPRK--EIFLLLAQIEQANSHN 374
             +  +K  P    E+   LA I      +
Sbjct: 326 -LLDGLKSDPNAPDEVHFYLAAIAYEYHKD 354


>gi|293412960|ref|ZP_06655628.1| cellulose synthase operon protein C [Escherichia coli B354]
 gi|291468607|gb|EFF11100.1| cellulose synthase operon protein C [Escherichia coli B354]
          Length = 1161

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 356 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 413

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 414 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 473

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 474 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 533

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 534 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 590

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 591 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 644

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 645 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 696



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 588 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 647

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 648 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 707

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 708 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 742


>gi|262376647|ref|ZP_06069875.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262308357|gb|EEY89492.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 570

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 10/221 (4%)

Query: 171 NSAQRYATKALDISPDAPWV--TEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAI 227
           ++A  YA +A+  +           + +  + A +   A+        K+     + RA+
Sbjct: 28  STAHLYAAEAVYHANQNYDAIKQSMMAEFAIAAHDIPTALHNYTVLAIKSNSTSVKQRAL 87

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            +        +  D+ A+   +   +      + A    +   +  ++   A   LEKI 
Sbjct: 88  NVA------LEHDDLQAALDISTHWVVQEPQDVPALFYLSHIALKAHEYELAAETLEKIL 141

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSIDQAHA 346
           +++   ++  I   +  E T  +      L     K++   LV+V+ +  + G ++QA  
Sbjct: 142 QIDDSADLEEILAGISPEGTEDRSYLIQALSTTKAKDNPSILVLVAGLEAQNGQLEQALN 201

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
               A+K  P    ++L+         +T   L W + +  
Sbjct: 202 TVNRALKKRPNATGYILMKANLLNALGDTQATLQWYEKSSR 242



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 57/166 (34%), Gaps = 11/166 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPW---VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           R+ +  +A R   +A    PD P        ++  +    +    ++ L + + N+  + 
Sbjct: 395 RMQNKKAAIRLLEEASKNLPDDPELVYSQVLLLDPHQDRVKLDELLSTLLKIEPNSPTYL 454

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A  L  ++    +      +     ++L+                  QN    A  +
Sbjct: 455 NAYAYTLAMQNRRLEE------ARRYVEQALEYAPEQASILDTYGYICYLQNDFATAADV 508

Query: 283 LEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVE 326
           L K +++NP+ +I   Y     +  +     +   +L++ +    E
Sbjct: 509 LYKAYQLNPNVKIGVRYARSLYMKGDLQHFHQVLQQLQQNHPNDPE 554


>gi|288573874|ref|ZP_06392231.1| Tetratricopeptide TPR_2 repeat protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569615|gb|EFC91172.1| Tetratricopeptide TPR_2 repeat protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 382

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 7/141 (4%)

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299
           +   A E++        A + A KSL  + K  +A   LEK   +   PE+A  Y     
Sbjct: 223 AELSAKEAVVFDPGFAEAWLLAGKSLFMRGKDYEATDYLEKAVDLR--PELAEPYFLIGQ 280

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +         ++        +     + V + ++ LE   +D A      A+++     
Sbjct: 281 AYKNRGRLEDAMEYFSLAISKDPGYQGAYVAMGQMLLEAAQLDLARKVLARAVELDGTDP 340

Query: 360 IFLLLAQIEQANSHNTDKILY 380
               L     A   + +    
Sbjct: 341 GARFLLGTAMALDGDDEGARG 361


>gi|229029298|ref|ZP_04185388.1| hypothetical protein bcere0028_13940 [Bacillus cereus AH1271]
 gi|228732046|gb|EEL82938.1| hypothetical protein bcere0028_13940 [Bacillus cereus AH1271]
          Length = 428

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 129 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITHYESLLVEHKVMGGVVIALR-LAET 187

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 188 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 242

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 243 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 302

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340
           +K                L   +    LK A  L+E  K   E L+ V + A++ G    
Sbjct: 303 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 347

Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362
               D A AK  L M        +  + 
Sbjct: 348 QLLWDLAFAKKQLEMYSDALKHYESAYT 375


>gi|298485614|ref|ZP_07003694.1| Cellulose synthase operon protein C [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159857|gb|EFI00898.1| Cellulose synthase operon protein C [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 1230

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 90/295 (30%), Gaps = 60/295 (20%)

Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156
            A +       ++   N  L   L + +   A+ Q   A   L +   + P     R   
Sbjct: 266 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 324

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213
              L     + G L++AQ    + L      P     ++       +   A+  L+    
Sbjct: 325 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 381

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++    +  R +A+     +     +GD+ A+     +++K   +++      A+  + 
Sbjct: 382 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 441

Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298
            ++  KA V+++++ K  P                                   P++  +
Sbjct: 442 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 501

Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              +                     L    RL+ +   S E  + ++   ++ G 
Sbjct: 502 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGE 556


>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
          Length = 125

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 34/87 (39%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               +  Y+ A E  +  L++      A Y+L     + GD + A  Y  KAL++ P+  
Sbjct: 18  AYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNA 77

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKK 215
                +   Y    ++  AI +  +  
Sbjct: 78  EAWYNLGNAYYKQGDYDEAIEYYQKAL 104



 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 2/97 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A + +    + +  + E    L        +  Y+ A E  +  L++      A 
Sbjct: 23  GDYDEAIEYYQKALELYPNNAEAWYNL--GNAYYKQGDYDEAIEYYQKALELYPNNAEAW 80

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           Y+L     + GD + A  Y  KAL++ P+     + +
Sbjct: 81  YNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNL 117



 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + GD + A  Y  KAL++ P+       +   Y    ++  AI +  +  +     N   
Sbjct: 21  KQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE--LYPNNAE 78

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           A   +  +     +GD   +     ++L+L  N
Sbjct: 79  AWYNLGNA--YYKQGDYDEAIEYYQKALELYPN 109


>gi|260598133|ref|YP_003210704.1| tetratricopeptide repeat protein [Cronobacter turicensis z3032]
 gi|260217310|emb|CBA31285.1| Uncharacterized protein yciM [Cronobacter turicensis z3032]
          Length = 381

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 89/277 (32%), Gaps = 47/277 (16%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +    ++    T   
Sbjct: 75  GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFNQLV--DETDF- 131

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                     RIG                       + ++Q Y    +W +AI    +  
Sbjct: 132 ----------RIG---------------------ALQQLLQIYQATSDWQKAIDAAERLV 160

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE  R   A      +L+     DM  +     +      NS   SI   +  +++ 
Sbjct: 161 KLGKEHQRVEIAHFYCELALQAMSNEDMDRAMSLLKKGAAADRNSARVSIMMGRIFMTRG 220

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS------ENTVGKLKRALRLEEINKESVESL 328
               A  +LEK+  ++   E+ +    +L              +   R  E N    E+ 
Sbjct: 221 DYAHAVEMLEKV--ISQDRELVSETLEMLQVCYQQLGKPAEWAEFLKRCVEENTG-AEAE 277

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           ++++++  +    D A       ++  P   +F  L+
Sbjct: 278 LMLAQVLEQREGADSAQVYITRQLQRHPTMRVFHRLM 314


>gi|190574011|ref|YP_001971856.1| tetratricopeptide repeat-containing protein [Stenotrophomonas
           maltophilia K279a]
 gi|190011933|emb|CAQ45554.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 392

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 94/299 (31%), Gaps = 19/299 (6%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++       A R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVNRHDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             + ++  Y   ++W +AI    + +    +   +         +      G +  +   
Sbjct: 148 ALKHLIGIYQAERDWEKAIDNATRFEDVTGEPMGKLIGQFECELAERFRGAGKLEEARAA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306
              + +    S+ A I   +          A    E+    +P   PE+      + +  
Sbjct: 208 IARAYQADAMSVRAGIIEGRLETDAGNPEAAVRAFERAASNDPEYLPELLPAL--MQNYR 265

Query: 307 TVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            VG L  A        E    +   + ++++  E   +  A A     +K  P       
Sbjct: 266 KVGDLAGARAFLSEMTEHYRGIAPVLALTRLMEEQEGVAPARAYLGRQLKDRPSVRGESA 325

Query: 364 LAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTLCY 417
           L  +  A   ++   L+  +     +   +P +       G  +  W    P  K    
Sbjct: 326 LIDLTLAEGADSTATLHDLKHITDQLLVRNPAYRCTRCGFGARTHHWQ--CPSCKEWGT 382


>gi|190572225|ref|YP_001970070.1| putative TPR repeat-containing protein [Stenotrophomonas
           maltophilia K279a]
 gi|190010147|emb|CAQ43755.1| putative TPR repeat protein [Stenotrophomonas maltophilia K279a]
          Length = 689

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 58/203 (28%), Gaps = 7/203 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A + A       P        +            A+  L Q  + A + 
Sbjct: 6   IQALRQNQADQAVQLAQAWTRDEPGQANAHRWLALALQQQGNAEEAMEALQQALRLAPD- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L +  +           +    + +  L  NS  A +  A   I +N   +A+ 
Sbjct: 65  ---DAQLHLQHAGLLLALRQFEGADEALVRTTGLDPNSFSAYLMQAHLAIGRNDFDEAQR 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           I     +V P HPE+  I     L   +    L       +   +    L  +    L  
Sbjct: 122 ISTLAARVEPDHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGK 181

Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361
             +  A       +++ P     
Sbjct: 182 DMLAFAEQSFRRVLELNPSLSSL 204



 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 80/228 (35%), Gaps = 7/228 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL + Q + A +  +   +    +  A   L     + G+   A     +AL ++PD   
Sbjct: 8   ALRQNQADQAVQLAQAWTRDEPGQANAHRWLALALQQQGNAEEAMEALQQALRLAPDDAQ 67

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +        +  +++  A   L +      + N   A L+  ++     + D   +   +
Sbjct: 68  LHLQHAGLLLALRQFEGADEALVR--TTGLDPNSFSAYLM--QAHLAIGRNDFDEAQRIS 123

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI-ANIYTHLLSEN 306
             + ++  +            + +    +A  +L    K  P     + A  + +L  + 
Sbjct: 124 TLAARVEPDHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDM 183

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                +   R+ E+N        +V ++AL  G++  A     +A++ 
Sbjct: 184 LAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVPAAAEAMQVALQQ 231



 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 85/269 (31%), Gaps = 41/269 (15%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQ------------------------------QHTFHNE 119
            G++++   +   A  + S  S+                              +    N 
Sbjct: 140 DGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDMLAFAEQSFRRVLELNP 199

Query: 120 YLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176
            L  L  L VQ+AL +     A E +++ LQ P     ++  L  E S R G    A  Y
Sbjct: 200 SLSSLHGLVVQLALRQGNVPAAAEAMQVALQQPEMDVPSMRRLAGELSLRNGQPLQALDY 259

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
               L+  P+   V + ++  +        A   L+         ++   + L   ++E 
Sbjct: 260 LLPLLETQPEDRQVLQLLLMSWQRLGREDEARARLDAVL---DTDDQLHDVWLARLAIEQ 316

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                 + +    + ++      + A     +      +  +AE I E+I  + P     
Sbjct: 317 VGSESAVTAVERWMAAM---PAHLPALEARLRLHDMAGEHAQAEAIAERIVSLEPGRVSG 373

Query: 297 NIYT--HLLSENTVGKLKRALRLEEINKE 323
                  LL  +    + R   L E+  E
Sbjct: 374 ETRLVEGLLQRDPAAAVARVQALIELAPE 402



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 7/163 (4%)

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291
           ++   +     +   A    +       A    A +L  Q    +A   L++  ++ P  
Sbjct: 6   IQALRQNQADQAVQLAQAWTRDEPGQANAHRWLALALQQQGNAEEAMEALQQALRLAPDD 65

Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
              H + A +   L         +  +R   ++  S  + ++ + +A+     D+A   +
Sbjct: 66  AQLHLQHAGLLLALRQFEGAD--EALVRTTGLDPNSFSAYLMQAHLAIGRNDFDEAQRIS 123

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            LA ++ P     L +  +      + D+ L    +A  A+PD
Sbjct: 124 TLAARVEPDHPELLTIDGMVALRRGDADRALALLSAASKALPD 166


>gi|182415012|ref|YP_001820078.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177842226|gb|ACB76478.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 645

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 67/205 (32%), Gaps = 10/205 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +        A     + L + PD P     +  +     + ++A+    +  +    +  
Sbjct: 433 ARSPERREEAIAAYREVLRLKPDHPDAHHGLGLELARLGDKAQAMAEYERAIELRPTYAE 492

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVI 282
               L +  +       D IA    A+   ++      A    A  L+   ++  +A   
Sbjct: 493 AHHRLGVELARLGGRDQDAIAHLEAAL---RVKPGLAEAHANLADLLLKTPDRLPEAMAH 549

Query: 283 LEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            E+    +P     H  I  + +HL        + R      I   S+++   ++   + 
Sbjct: 550 YEEALHFDPTLAWVHCRIGFVLSHL-PGRQHEAISRYETALRIEPNSIDAHNGLAIAYIM 608

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362
           MG  D A  +    ++I P +E   
Sbjct: 609 MGRADAARREWETVVRIDPSQESAR 633


>gi|4103604|gb|AAD01798.1| putative mitochondrial outer membrane protein import receptor [Homo
           sapiens]
          Length = 941

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|119595583|gb|EAW75177.1| chromosome 20 open reading frame 14, isoform CRA_d [Homo sapiens]
          Length = 845

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 483 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 540

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 541 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 600

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 601 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 660

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 661 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 718

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 719 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 776

Query: 391 D 391
           D
Sbjct: 777 D 777



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 192 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 248

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 249 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 300

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 301 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 353

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 354 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 399


>gi|160896312|ref|YP_001561894.1| TPR repeat-containing protein [Delftia acidovorans SPH-1]
 gi|160361896|gb|ABX33509.1| TPR repeat-containing protein [Delftia acidovorans SPH-1]
          Length = 647

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 11/193 (5%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           V    W  A     +        N   A LL+     +        +    ++++++  N
Sbjct: 40  VAQGRWDEAAQLYEKAI----LANSADASLLVGLGFSHLQAVRPKQALATLLQAIRVLPN 95

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313
           S  A   A K+ I+   +  A     ++  VNP     +P+I  +   L        ++ 
Sbjct: 96  SQDAWFLAGKAQIALGLEEDAAKSWRRLLAVNPDFLPVYPDILQLLVRL--GCAQEAMEI 153

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
           AL+  E   +  E  +  + + +     + A    + A+KI P     L    +    S 
Sbjct: 154 ALKAAERVPDCFEYQLYHANLLVHAHQTEAAIPYYLQALKINPNSADVLANLGVACRQSG 213

Query: 374 NTDKILYWTQSAL 386
           + ++ L +++ A+
Sbjct: 214 DLERALNYSRQAM 226


>gi|242041483|ref|XP_002468136.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor]
 gi|241921990|gb|EER95134.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor]
          Length = 843

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 19/226 (8%)

Query: 173 AQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           A     +A ++ P            +         ++ A        + A+      A +
Sbjct: 288 ALASFRRACELQPTDVRPHFRAGNCLYAL----GRYAEAKEEYLLALEAAEAGGSQSADI 343

Query: 229 LIA----RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           L        +    +G ++ +     E+  LC +   A      +L    + R AE  LE
Sbjct: 344 LPQIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALE 403

Query: 285 KIW-----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +         + H ++ +   H + E+    ++      ++    V++L  +  + ++ G
Sbjct: 404 EAIFLKEDYADAHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAG 461

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
              +A       + I P      L   +       +++     + A
Sbjct: 462 RFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 507



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 37/203 (18%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +  E+   G +  A  +  +A  + P      + +        E+  A   L +     
Sbjct: 352 GIAMEA--EGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLK 409

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +++    A   +  +L     G+   +  +   ++ L    + A        +   +  +
Sbjct: 410 EDY--ADAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 465

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A                A +YT +L                I      + +  +   L  
Sbjct: 466 A----------------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQ 494

Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361
           G  ++A      A K+  R E++
Sbjct: 495 GESEEAKKALKEAFKMTQRVEVY 517


>gi|59712363|ref|YP_205139.1| hypothetical protein VF_1756 [Vibrio fischeri ES114]
 gi|59480464|gb|AAW86251.1| conserved protein [Vibrio fischeri ES114]
          Length = 389

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 93/294 (31%), Gaps = 51/294 (17%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A K+H  +  +   T     +      +  +     + A +  E +L+ P  R  
Sbjct: 83  GEVDRAIKIHQNLIARPNLTIDQRNIALQQLAKDYMVSGILDRAEKIFEQLLEEPDHR-- 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                                  +A  +          +V  +   +EW +AI F N   
Sbjct: 141 -----------------------EAALLQ---------LVAIHQQTREWEQAIQFANSLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +  ++  +   A      +++     ++  +  +  ++L   +  + ASI  AK L+ + 
Sbjct: 169 RMGRKKLKLDIAHYYCELAMQELADENLNKAKQNLKKALSSDNQCVRASIMMAKLLMEEE 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVES 327
             + A   LE +      +     P +A  Y  L  E   +  LK    + +    S E 
Sbjct: 229 NYKSALAHLESVLDQDIDFVSEALPLLAECYEKLDREGALLQFLK--EAISKGAGASAE- 285

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILY 380
            +++S +  +   +  A       +   P     + L+      +     +   
Sbjct: 286 -LMLSNLIAKHEGVALAQGYMTKQLLKNPTMKGFYRLMGY--HTDEAEDGRAKA 336


>gi|212633293|ref|YP_002309818.1| HemY protein [Shewanella piezotolerans WP3]
 gi|212554777|gb|ACJ27231.1| HemY [Shewanella piezotolerans WP3]
          Length = 388

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 137/416 (32%), Gaps = 53/416 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL--- 57
           M+R++ Y  +I L       ++     + +  G+    TS    +  L  F     L   
Sbjct: 1   MVRVLVYLGIILLGFFISPFLAGNKGYLYLAVGDYQVETSIVFAVIALVIFYSLLQLAEF 60

Query: 58  -LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115
            +  V    L    +      K            G +++A  +   A K M     +   
Sbjct: 61  VIVWVLNLILGSRLLPEKWRKKAARKHTLM----GALALAEEDWAAAEKAMVKGADKGEI 116

Query: 116 FHNEYLVYLLEVQIAL--AERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169
                L      Q     A R   +A  +LE +         TR            + G+
Sbjct: 117 PALNLLAAARAAQHQNNIAARDEYLAKAELEPLATKAVSTTRTRYL---------LQQGE 167

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKE----- 220
           L  A+    K    S     V +  V  Y   ++W +A+  +    ++K+  A +     
Sbjct: 168 LALAREELDKLNPTSKSKAPVIKLAVDLYKAQQDW-QALKLILPIASKKQIMADDIFKKL 226

Query: 221 -WNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            +  N A+L  A S   +  +K     S  +  ++  + +         A  L   N+K 
Sbjct: 227 TFETNIALLKNAASTNEQELEKCWHWLSRSERKQAEYIAE--------YAIGLNRYNQKE 278

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           ++  +L+K  K +P   I    + +L+ + V   K+ L LE   +++V+  V ++K+  +
Sbjct: 279 QSIKLLQKQLKTSPSKAIFEALSQVLTPSDVEAKKQLLALEANFEDNVDYQVCLAKLYHQ 338

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                 A      A  +         LA +++               AL    +  
Sbjct: 339 NHDYHNAKIWWQKACYLQDDISNLHALADVQEHQGE--------LNRALQTRRNAA 386


>gi|189188548|ref|XP_001930613.1| DNAJ domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187972219|gb|EDU39718.1| DNAJ domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 728

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 80/247 (32%), Gaps = 24/247 (9%)

Query: 88  LYTGLMSIAAHNI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L  G   +   N   L    +  +S     + +    +L  +I  A+ + + A +     
Sbjct: 373 LMRGEAHLRMGNANALGEAQNVAMSLLRYNNQDPDALVLRGRILYAQGENDKAVQHFRQA 432

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L                     D  +A +Y      +         A       A  +  
Sbjct: 433 LNCDP-----------------DFKTAVKYLRMVQKLDRLKSEGNAAF-----KAGRFQE 470

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           AI   +Q            + +L  R+L ++ +     +  D  ++L+L  +   A    
Sbjct: 471 AIDTYSQALAVDPSNKSTNSKILQNRALCHSRQKSWKQAIADCEKALELDPSYTKARKTR 530

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           AK+L       +A   L+ I + NP  P IA        E    K K   ++  I K++ 
Sbjct: 531 AKALGENGNWEEAVRDLKAIAEENPSEPGIAKEIRDAEMELKKSKRKDYYKILGIQKDAT 590

Query: 326 ESLVIVS 332
           E+ +  +
Sbjct: 591 ETEIKKA 597


>gi|310822131|ref|YP_003954489.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395203|gb|ADO72662.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 837

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 34/297 (11%)

Query: 98  HNIPLARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
            ++ +A+       + Q    N+Y ++ L  Q  L  +    A    +           A
Sbjct: 173 GDVAIAKFQRYLAQRPQKLAVNDYQIHELIGQGHLMRKDVAAARASFQQAQAGRPESVTA 232

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L       G    A       ++  P A    E + + ++ +   + A     Q   
Sbjct: 233 QMGLASVLEMEGKDEEALALVEGLVERFPQAKEPKERLGRMFLRSGNVAGAE---TQALA 289

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             K      A LL+        +     +  +  + L++    + A I  +K+L +Q + 
Sbjct: 290 LVKLEATPAARLLLGE--VRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRN 347

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLV 329
            +A   LE   +     +  N+       +   +  R         RL E+  +     V
Sbjct: 348 EEAIKYLEAALEA----DGGNLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHV 403

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           ++       G  DQA      A+++ P                 +      W   AL
Sbjct: 404 LLGADHFATGQWDQAIEDYANALRVEP-----------------DHAGAQQWLAHAL 443



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 30/307 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-----LAERQYNIAHEKLEMMLQIPAT 152
             + LA+K       +     E    ++  QIA      A+ +   A + LE  L+    
Sbjct: 304 GEVRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRNEEAIKYLEAALEADGG 363

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                 SL   + R G    A     + ++++P        +   +    +W +AI    
Sbjct: 364 NLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHVLLGADHFATGQWDQAIEDYA 423

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--- 269
              +   +    +  L  A +     + D      DA+  L+   +   ++  A +    
Sbjct: 424 NALRVEPDHAGAQQWLAHALAHRARGRADTNR-LDDAVRDLRRAYDLERSAAMARRLGAA 482

Query: 270 LISQNKKRKAEVILEKI-------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           L+ Q    +A  +LE+        W+ +        Y HL   N    L+  ++ E+  +
Sbjct: 483 LLEQRAFAQARPVLEQAVTLEGSTWREH----WMLGYAHLGEGNAEAALRAFIQAEKRTE 538

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI----------FLLLAQIEQANS 372
           E  +   +    AL    + +         +  P K             LL   + +  +
Sbjct: 539 EPADLADVSVGAALAEVELGRVDDAVERLSEPGPSKAARQLAEANLPLMLLRRALTRLET 598

Query: 373 HNTDKIL 379
            + +   
Sbjct: 599 ADVENAR 605


>gi|307314342|ref|ZP_07593949.1| cellulose synthase operon C domain protein [Escherichia coli W]
 gi|306906057|gb|EFN36577.1| cellulose synthase operon C domain protein [Escherichia coli W]
 gi|315062809|gb|ADT77136.1| cellulose synthase subunit [Escherichia coli W]
 gi|323376603|gb|ADX48871.1| cellulose synthase operon C domain protein [Escherichia coli KO11]
          Length = 1157

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738


>gi|229138312|ref|ZP_04266907.1| hypothetical protein bcere0013_14330 [Bacillus cereus BDRD-ST26]
 gi|228645204|gb|EEL01441.1| hypothetical protein bcere0013_14330 [Bacillus cereus BDRD-ST26]
          Length = 434

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    + +K+ + S+   +  A      
Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHKGIKVDELSVPFYVELANIAAKL 298

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|209886816|ref|YP_002290673.1| tetratricopeptide repeat domain protein [Oligotropha
           carboxidovorans OM5]
 gi|209875012|gb|ACI94808.1| tetratricopeptide repeat domain protein [Oligotropha
           carboxidovorans OM5]
          Length = 429

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 104/314 (33%), Gaps = 21/314 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHEKLEM--- 145
           G ++    +  LA ++     Q+  F ++    LL  +     A  + + A    +    
Sbjct: 43  GFVAKDRGDFTLAIRLFDEALQRGLFSDKQRGLLLYSRGVSNEALGRRDRALSDFDAAIA 102

Query: 146 -MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            + + P+        + +   R      A +    A  ++P  P V   +   Y    + 
Sbjct: 103 LLPEFPSAYL--YRGIIWGDERE--YQRALQDFLTASKLNPGDPLVFNNLGNVYEKLGDL 158

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            RAI       +   ++    A     R+     K D   +  D  +++ L      A +
Sbjct: 159 DRAIENYGLAIRLRSDY----APAYYNRARTYVLKQDEERAIADYDKAIALQPTYEDAYV 214

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----IYTHLLSENTVGKLKRALRLEEI 320
             A     +   + A   L+   ++NP  ++A        +L  E     L    R   +
Sbjct: 215 NRAVLYFFRRDIKSALADLDTAIRLNP-RDVAALSNRASVNLAIEKYAEALSDFDRALTV 273

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           +  +  + +   +  L  G++D        A+++ P     ++   I + +   +D    
Sbjct: 274 DPGNAATYLGRGRAHLFSGAVDDGIEDFKTAVRLRPSNPYPVIWLHIARVHRGESD--RE 331

Query: 381 WTQSALHAMPDPLW 394
             ++ + A     W
Sbjct: 332 EFEANVKAAKGEAW 345


>gi|125624131|ref|YP_001032614.1| hypothetical protein llmg_1310 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124492939|emb|CAL97902.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300070905|gb|ADJ60305.1| hypothetical protein LLNZ_06775 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 418

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 88/265 (33%), Gaps = 44/265 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             I  ++K++  +  +H    +YL+ L   +IA      + A   L  +         A+
Sbjct: 46  GFIDESQKIYDQIMSEHPESTDYLINL--AEIAEDNGNLDEALNYLYQIPVDDENYIAAL 103

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +       GD  +A     +A ++S D+P +T A+ + Y    ++S AIT    K   
Sbjct: 104 VKIADLYQYEGDFETAISKLEEARELS-DSPLITFALAESYFEQGDYSAAITE-YAKL-- 159

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                  R IL   +       GD                                    
Sbjct: 160 -----SERKILHETKISIYQRIGDS---------------------------YAQLGNFE 187

Query: 278 KAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            A   LEK ++ +  PE    IA +Y  + +E     +    RLE+++ E +   +  ++
Sbjct: 188 NAISFLEKSFEFDEKPETLYKIALLYGEIHNETRA--IANFKRLEKMDVEFLNYELAYAQ 245

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358
                   + A   A   +   P  
Sbjct: 246 TLEANQEFEAALEMAQKGLNKNPNA 270



 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 23/198 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154
            +   A  +      +    +  + + L  +    +  Y+ A  +   + +      T+ 
Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               S+Y    RIGD  +       A   L+ S +     E + +  +L  E    I   
Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSFEFDEKPETLYKIALLYGE----IHNE 219

Query: 212 NQKKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
            +   N K   +     L   +A +       +  A+   A + L    N++     A+K
Sbjct: 220 TRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFEAALEMAQKGLNKNPNAVPLLHFASK 279

Query: 269 SLISQNKKRKAEVILEKI 286
                  K  AE  L   
Sbjct: 280 ISFKLKDKAAAERYLMDA 297


>gi|254450665|ref|ZP_05064102.1| sulfotransferase [Octadecabacter antarcticus 238]
 gi|198265071|gb|EDY89341.1| sulfotransferase [Octadecabacter antarcticus 238]
          Length = 545

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 22/197 (11%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             + +Y  A    + +L+       A+  +   +    +  +A  Y  KAL  +P  P +
Sbjct: 36  QRDGKYLEAERIYQTVLRTEPRNAQALNLMGTLAIEANETKTALDYFRKALRGAPRDPII 95

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +    +  K+  +A  +L +  +    +    A+  + ++      G  + +     
Sbjct: 96  NNNMGNLLLRLKQNEKARQYLLKALQAKPNF--VEALCNLGKAHRLLLNG--VEAERLLR 151

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------------------H 292
           ++L     S+MA    A  LI   +   A  + E +   +P                   
Sbjct: 152 KALDFKPTSLMARQNLADLLIDNGQADAAADMFESLLSEDPGNLEALVGLAASRKFKTDA 211

Query: 293 PEIANIYTHLLSENTVG 309
           PE+  I   +  ++T  
Sbjct: 212 PELGLILHRIKEQDTPD 228


>gi|89095046|ref|ZP_01167974.1| Tetratricopeptide [Oceanospirillum sp. MED92]
 gi|89080678|gb|EAR59922.1| Tetratricopeptide [Oceanospirillum sp. MED92]
          Length = 789

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 81/225 (36%), Gaps = 5/225 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  AH +    LQI      A+Y +     +  D     RY  + +++ PD      A
Sbjct: 41  GDYEAAHIEFRNALQINPNHVEALYEVTKVFEQKKDWAKIHRYLERVIELQPDHVDALVA 100

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +    + A++  +A+    +  + A    + R       S+     GD      +A+ESL
Sbjct: 101 IGGIELTAQQLDKALERSEKAMRVAPGSAKVR----SFHSVVLFKLGDAEGGVREALESL 156

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTHLLSENTVGKLK 312
           K+   +I A +  A   +       A   L +  K  N   ++  +      +N  G  +
Sbjct: 157 KIDPENIDAILLLASERLKAGDSLGALDYLNEADKQDNILVQLMKVRAFNEQKNLAGATQ 216

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               L +   +  +  + ++K  L  G  ++A      A+   P 
Sbjct: 217 TFEELIKQYPQDEKYYLALAKQFLLFGEREKADQVLQRALTDLPD 261



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 100/271 (36%), Gaps = 15/271 (5%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A N+    +    V      + E +V  L  Q ++ +     A   L  +L+   +    
Sbjct: 346 AGNLSSGDQYVKQVLVLDKSNQEAIV--LNAQRSMVKGDLAKAISTLREVLRDNPSSSVI 403

Query: 157 VYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +  L  ++    G +  A  + ++A ++      + E+  +  +  +++++  + + +  
Sbjct: 404 L-GLLGQAHEAQGKIELALDHYSQAYEVDSGNKLILESYAKILLSQRQYTKLESVIEKYL 462

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                     A+ + A+      K     +  D I+ L +  +   A      +L+ Q +
Sbjct: 463 HLNP--RDINALKISAQVKLTLRKWGEAQAIADRIDKLNIEAD--EAEQIRGAALLGQKR 518

Query: 276 KRKAEVILEKIWKVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             ++    E+ ++ +     P   +   Y      +    +     + E + ++ E+L +
Sbjct: 519 NLESIEAFERAYEASQSKVKPMRALVGSYVAAKQIDNA--VSFLKSVLEKDTDNREALSL 576

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           ++++   +   ++A    +  M   P++  F
Sbjct: 577 LAQVYFLIDKREEAEKLLVEGMNNYPKEGTF 607


>gi|313148721|ref|ZP_07810914.1| TPR-repeat-containing protein [Bacteroides fragilis 3_1_12]
 gi|313137488|gb|EFR54848.1| TPR-repeat-containing protein [Bacteroides fragilis 3_1_12]
          Length = 278

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 8/167 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           + L    I L +   + A+    ++M +    T    + + Y    R  D   A+    +
Sbjct: 100 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 157

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L+I P        +        ++  ++  LNQ      E     A+L +AR+    D 
Sbjct: 158 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPE----DAVLYVARADVERDM 213

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +  D  E+++L  NS+ A +      + Q KK +A+   EK 
Sbjct: 214 KHEDLALVDLDEAIRLAPNSVDAYLLRGDIYLDQKKKSQAKADFEKA 260



 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 63/180 (35%), Gaps = 15/180 (8%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           ++A   L Q  +  +  N + A+L     L     G    +      +L +   ++   +
Sbjct: 44  AQAEDLLKQALR-LEPKNPHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILL 102

Query: 265 CAAKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALR 316
             A   + Q  + KA         + +K  +      +   Y + L  +    +L    R
Sbjct: 103 NRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQR 157

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375
           L EI+ ++    + ++ +  + G   ++       +   P    +++  A +E+   H  
Sbjct: 158 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPEDAVLYVARADVERDMKHED 217


>gi|88703968|ref|ZP_01101683.1| TPR domain protein [Congregibacter litoralis KT71]
 gi|88701795|gb|EAQ98899.1| TPR domain protein [Congregibacter litoralis KT71]
          Length = 923

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 88/296 (29%), Gaps = 42/296 (14%)

Query: 89  YTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHE 141
              L+++      A ++    K           ++     L+E +      +     A  
Sbjct: 403 TENLVALGSQQIVAGDLDAGLKQLEDALAGDPDNSLARERLIEARLVAQDLDGALEEASR 462

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            +E  ++  +TR            +  + ++A+    +AL   P +      +    VL 
Sbjct: 463 YVE--VEPDSTRALIFRGRVL--LQRQNTDAAREDFEEALRRDPASVPARGGLAAIAVLG 518

Query: 202 KEWSRAITFLNQKKKNAK-----------EWNRNRAILLIARSLENADKGDMIASYHDAI 250
           ++   A +   +  +                 R   ++ + + L  A + +  A      
Sbjct: 519 QDLEGAQSEFEKSLEANPGNLQSSLNLAVVLERRGELVEMEQVLSAAVEANPTAVAPRVA 578

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKVNPHPEIANIYTHLLSEN 306
            + K   +   A   A + L  +   R+    A   L   + +    E+A +        
Sbjct: 579 LARKAMMDKQPA--IAIELLSVEEIARQKDVGALQTLTGAYVLAEQAELAQL-------- 628

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
                  A  L E+       L + ++  +       A  +   A+++AP      
Sbjct: 629 ------SAKELLELRPNDPMVLALSARADVLSQDFASAREQLESALEMAPNVSALR 678



 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 98/303 (32%), Gaps = 47/303 (15%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFA 156
           +   A    +  + +   +       L       +R    A E L+ +++      R ++
Sbjct: 146 DEAKAALQRALAAGEADDNYIAFTQALV--SLQVDRDQETAQESLQSIVERDPKHARAWS 203

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L   + +  D  +A+ Y  KA   +P        +V+  V   +   A   L++ + 
Sbjct: 204 LLGLL--AWQNRDFVAAEEYYEKAAAANPYRVGDRIQLVETQVRLGKADVASANLSKLET 261

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             + +   R      R+    D+G+   +     + L +  ++  A + A  +    NK 
Sbjct: 262 QLRNYPAIR----FLRAQLLFDEGNYEGAIDLFNQILSVSPDNPGALLLAGNANARINKL 317

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR------------------ 313
             A   LE+  ++ P       ++A +   +       +L R                  
Sbjct: 318 PIARRHLERFLELQPGSTQAALQLAQVNALMGEPGRTEELARSLLEREADNQTALTLLAN 377

Query: 314 --------------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                           +L ++  ES E+LV +    +  G +D    +   A+   P   
Sbjct: 378 ALAAQGMHAESAQVFKQLADLRPESTENLVALGSQQIVAGDLDAGLKQLEDALAGDPDNS 437

Query: 360 IFL 362
           +  
Sbjct: 438 LAR 440



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 84/238 (35%), Gaps = 7/238 (2%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L   Q+     +     E    +L+  A  + A+  L       G    + +   +  D+
Sbjct: 339 LQLAQVNALMGEPGRTEELARSLLEREADNQTALTLLANALAAQGMHAESAQVFKQLADL 398

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P++     A+  Q ++A +    +  L        + +  R  L+ AR        D+ 
Sbjct: 399 RPESTENLVALGSQQIVAGDLDAGLKQLEDALAGDPDNSLARERLIEAR----LVAQDLD 454

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYT 300
            +  +A   +++  +S  A I   + L+ +     A    E+  + +P    A       
Sbjct: 455 GALEEASRYVEVEPDSTRALIFRGRVLLQRQNTDAAREDFEEALRRDPASVPARGGLAAI 514

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            +L ++  G      +  E N  +++S + ++ +    G + +       A++  P  
Sbjct: 515 AVLGQDLEGAQSEFEKSLEANPGNLQSSLNLAVVLERRGELVEMEQVLSAAVEANPTA 572


>gi|323452442|gb|EGB08316.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
          Length = 1151

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 82/269 (30%), Gaps = 21/269 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIP---ATR 153
            +   A++++           +    L      L   +   A E  E  +L  P    TR
Sbjct: 142 GDPRGAKRLYLKAIALKPRFTDAYNNL--ASAHLHLGETREALETYEAALLVDPSLAETR 199

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                 L       G  + A+    +AL  +P+      A+   Y        A  +  +
Sbjct: 200 C----HLGHLHRAAGRRDVAEHCYAEALACAPNLAAAWCALAAIYKERGRLDDAAAYYRE 255

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +         + L         ++G + A+  +   +++L     +A    A     +
Sbjct: 256 AIRRKPSAFDAHSNL----GNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNLASCYFEK 311

Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
               +A  I      + P+ P+    + N        +    +    R   +  +   + 
Sbjct: 312 GDLERAIRIFRVALDIEPNFPDACNNLGNALRE--HGDLEEAIACYRRALLLRPDHAHAH 369

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +     + G +++A      A+ +APR
Sbjct: 370 NNLGNAMKDKGLVNEAIQCYATAVGLAPR 398



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 94/308 (30%), Gaps = 17/308 (5%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +  AA    +A   H Y        N    +     I     + + A       ++  
Sbjct: 203 GHLHRAAGRRDVAE--HCYAEALACAPNLAAAWCALAAIYKERGRLDDAAAYYREAIRRK 260

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            +   A  +L       G +++A     +A++++P        +   Y    +  RAI  
Sbjct: 261 PSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNLASCYFEKGDLERAIRI 320

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                     +    A   +  +L   + GD+  +      +L L  +   A      ++
Sbjct: 321 FRVALDIEPNFP--DACNNLGNAL--REHGDLEEAIACYRRALLLRPDHAHAHNNLGNAM 376

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
             +    +A         +   P  A  +++L             L        ++ +  
Sbjct: 377 KDKGLVNEAIQCYATAVGLA--PRFAAAHSNLGLVLKERGTVDDALAHYREAIAVDPQFA 434

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFL-LLAQIEQANSHNTDKILYWTQ 383
           ++   +     ++G +D A      A+K+ P   +    L A  +    H      Y  +
Sbjct: 435 DAYSNMGNAYKDLGRLDDAIRCYGEALKLRPDFADACSNLAAAYKDGGRHAEAVACY--R 492

Query: 384 SALHAMPD 391
            AL   PD
Sbjct: 493 RALELKPD 500


>gi|215488807|ref|YP_002331238.1| cellulose synthase subunit BcsC [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215266879|emb|CAS11320.1| cellulose synthase subunit [Escherichia coli O127:H6 str. E2348/69]
          Length = 1157

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLAR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLAREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738


>gi|124024089|ref|YP_001018396.1| hypothetical protein P9303_23981 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964375|gb|ABM79131.1| Hypothetical protein P9303_23981 [Prochlorococcus marinus str. MIT
           9303]
          Length = 587

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 76/249 (30%), Gaps = 32/249 (12%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR 153
             +  A ++     ++   +      L   +I     Q+  A    +  L+     P T 
Sbjct: 48  GQLQQAVELIQASIREDESNPIPFFNL--GKILAIAGQHENAVGVFQESLKRNQQIPETW 105

Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  +  + R  G    A+R    AL ++P        +        E   A   L 
Sbjct: 106 FC-----FANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR 160

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +   +  E        L+   +   ++G+   +     +++++  +   A       L  
Sbjct: 161 RALASNPE----DINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFEDAYFNLGLLLKE 216

Query: 273 -QNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRALR-----LE 318
            + K        +KA  I  K  +V   P+    Y +L++      +L  A       L 
Sbjct: 217 VEGKVEEASVFFQKAIAIYRKAIEVK--PDSGQAYVNLVTVLNKDGRLDEARVAIECLLS 274

Query: 319 EINKESVES 327
               +  +S
Sbjct: 275 LKPPDDRQS 283



 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 5/164 (3%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q     R  + A    + +L +      A++ L       G L  A      ++      
Sbjct: 9   QAYQ-GRDLDDAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESN 67

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P     + +   +A +   A+    +  K  ++          A +L   + G    +  
Sbjct: 68  PIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIP--ETWFCFANAL--REIGKTEEAKR 123

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               +L+L      A+      L    +  +AE +L +    NP
Sbjct: 124 AYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNP 167


>gi|301025865|ref|ZP_07189353.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
 gi|300395794|gb|EFJ79332.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
          Length = 1157

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYKNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYKNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|258592532|emb|CBE68841.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 2960

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 78/206 (37%), Gaps = 22/206 (10%)

Query: 169  DLNSAQRY-----ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            D  +A        A++A + S   P    A+  +  ++  +  A T L  +  +A   + 
Sbjct: 1591 DRIAALTLEVYNAASRACEASAPTPNTARAMNDRSEVSSRYETA-TILRYQSVSADSGDV 1649

Query: 224  NRAILLIA-------RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +++  A       ++ ++  +GD  A+     ++++L  +     +     L+     
Sbjct: 1650 QTSLVRSANVIEQIRQAEQHLAQGDPPAAAQALSQAVQLAPHDPELIVAHGNVLLQLGDV 1709

Query: 277  RKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVI 330
              A     K   + P     H  +A +Y H+   E     ++R       N   +++L +
Sbjct: 1710 EAARREFVKATVLAPDYPAAHLNLAAVYLHMGRGEEAEASIRRV---LAANSADIDALKL 1766

Query: 331  VSKIALEMGSIDQAHAKAMLAMKIAP 356
            + ++ L+     +A    +  ++ AP
Sbjct: 1767 LGRLCLDSARYTEAVESYLTVLRHAP 1792



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ ++  +GD  A+     ++++L  +     +     L+       A     K   + P
Sbjct: 690 QAEQHLAQGDPPAAAQALSQAVQLAPHDPELIVAHGNVLLQLGDVEAARREFVKATVLAP 749

Query: 292 -----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                H  +A +Y H+   E     ++R       N   +++L ++ ++ L+     +A 
Sbjct: 750 DYPAAHLNLAAVYLHMGRGEEAEASIRRV---LAANSADIDALKLLGRLCLDSARYTEAV 806

Query: 346 AKAMLAMKIAP 356
              +  ++ AP
Sbjct: 807 ESYLTVLRHAP 817



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +Q++   +   A   L+Q  + A     +   L++A        GD+ A+  + +++  L
Sbjct: 692 EQHLAQGDPPAAAQALSQAVQLAP----HDPELIVAHGNVLLQLGDVEAARREFVKATVL 747

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTV--GKLK 312
             +   A +  A   +   +  +AE  + ++   N    +   +   L  ++      ++
Sbjct: 748 APDYPAAHLNLAAVYLHMGRGEEAEASIRRVLAANSADIDALKLLGRLCLDSARYTEAVE 807

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             L +       VE+L+IV     E+G  DQA A     + + P   +  
Sbjct: 808 SYLTVLRHAPHDVETLLIVGNCYAEIGRFDQARAFYRKVLSLEPSNAVAT 857


>gi|260846319|ref|YP_003224097.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009]
 gi|257761466|dbj|BAI32963.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009]
          Length = 1140

 Score = 51.9 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398


>gi|320536700|ref|ZP_08036711.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320146462|gb|EFW38067.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 576

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 6/132 (4%)

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLL 303
            H    + KL   S++ +    K    Q    KAE      W++ P  +P          
Sbjct: 171 LHRIQAAQKLMPESVLPAFLLGKYFELQGSSSKAETAYRLAWEIAPSCYPAGIQYDRFAA 230

Query: 304 SENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +     + KR   +L +   +++E  ++ ++I L++  +D A    +  +K  P     L
Sbjct: 231 AGGNTEQAKRIGNQLLQRFPDNIEIFLLQAEIYLKLKDLDSAEPYIIEVLKRRPENTAAL 290

Query: 363 LL---AQIEQAN 371
           LL     IE+  
Sbjct: 291 LLRIQILIERKE 302


>gi|293416975|ref|ZP_06659612.1| cellulose synthase operon protein C [Escherichia coli B185]
 gi|291431551|gb|EFF04536.1| cellulose synthase operon protein C [Escherichia coli B185]
          Length = 1157

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKSAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNA 218
                  GD ++A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKSAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKVIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|254250922|ref|ZP_04944240.1| hypothetical protein BDAG_00087 [Burkholderia dolosa AUO158]
 gi|124893531|gb|EAY67411.1| hypothetical protein BDAG_00087 [Burkholderia dolosa AUO158]
          Length = 765

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 79/261 (30%), Gaps = 28/261 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L          + + A    E + +       AT    +      +C++G   +     
Sbjct: 22  RLNTALAHHQAGRLDDARVLYEAIRRDAPDHPDATHFLGL-----LACQLGQFPAGLALM 76

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+ +  D  ++                AI    +    A  +    A           
Sbjct: 77  ERAIALRADPVYLNNFG-NMLRAHGRLDDAIAAYRRATALAPGY----AEAHSNLGNALR 131

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           D  D  A+      +L L  +   A      +L  + +   A    +K   ++  P  A+
Sbjct: 132 DARDPDAAMLSCAHALALRPDYAPAYNNLGNALQDKGELDAAARAYDKAIALD--PAYAD 189

Query: 298 IY--------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                          ++ + + +RA+ L     +   +   +  +  E G +D A A   
Sbjct: 190 ACFNQGNVFRAQGRLDDAIARYRRAIGL---QPQLHAAHHALGVLLFERGELDAAIASLR 246

Query: 350 LAMKIAPRKEIFLLLAQIEQA 370
            A +      +F L A +++A
Sbjct: 247 CAAQSGEVDSLFNLAAALDRA 267


>gi|293453834|ref|ZP_06664253.1| cellulose synthase operon protein C [Escherichia coli B088]
 gi|291321960|gb|EFE61391.1| cellulose synthase operon protein C [Escherichia coli B088]
          Length = 1161

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 105/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 356 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 413

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 414 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 473

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 474 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 533

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +M +   A  L   
Sbjct: 534 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVMET---ANRLRES 590

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 591 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 644

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 645 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 696



 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 588 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 647

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 648 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 707

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 708 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 742



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 261 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 315

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 316 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 375

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 376 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 419


>gi|291286013|ref|YP_003502829.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290883173|gb|ADD66873.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 533

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 90/240 (37%), Gaps = 18/240 (7%)

Query: 127 VQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             +A    +Y  A E            +    YSL   +   G+  +A+++  + L I P
Sbjct: 277 ANMAFERNEYAKAEEYFARAFEIDKDIQTA--YSLAIMAESAGETATAKKWYQEILTIRP 334

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D    ++ +   Y+   E   A+T + +     ++ + +R +     +    D G+   S
Sbjct: 335 DFVEASKRLAIIYLKDGEPEEALTAVQKVGDIYQDVDYHRIV-----AQAYNDMGEHKKS 389

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYT 300
                 ++K     +   +  A +L  Q  ++ AE +++   K  P        +  +Y 
Sbjct: 390 IEVLTAAVKENPAEVKLYLDLALALDKQGDRKDAENVIKSGMKYFPDDASLLNFLGYVYA 449

Query: 301 H--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              +   +    + RAL+    N E    L  ++ +  + G   +A      A+K+AP +
Sbjct: 450 EQGVNLSDAEEMISRALK---QNPEEPAYLDSMAWVYYQQGKYQKAFDYQKRALKMAPDE 506



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 81/252 (32%), Gaps = 48/252 (19%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E+  IG    A +   +A  IS D  +  EA  + +  AK+++ AI   +      K 
Sbjct: 111 MTETENIG---KAYKLYRQAYKISGDVIYA-EAEARAHASAKDFNSAIKIYSDLINIEKV 166

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            +       + R+      G    +  D I +  L  N I AS   A   I      KA 
Sbjct: 167 SDY-----YVQRARYFEKLGLSKEALDDYISASDLDSNFI-ASAKLADHYIETGDNDKAI 220

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVI--------- 330
           V L+K+                  +  + K + A  L +I K E  E             
Sbjct: 221 VYLKKV-------------IDASPDMVLAKFRLAQILSKIGKTEEAEGYFTAILDFLNES 267

Query: 331 --------VSKIALEMGSIDQAHAKAMLAMKIA---PRKEIFLLLAQIEQANSHNTDKIL 379
                   ++ +A E     +A      A +I           ++A+    ++  T    
Sbjct: 268 EKIYVLKSLANMAFERNEYAKAEEYFARAFEIDKDIQTAYSLAIMAE----SAGETATAK 323

Query: 380 YWTQSALHAMPD 391
            W Q  L   PD
Sbjct: 324 KWYQEILTIRPD 335


>gi|307718566|ref|YP_003874098.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM
           6192]
 gi|306532291|gb|ADN01825.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM
           6192]
          Length = 305

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 71/193 (36%), Gaps = 3/193 (1%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               +R + +Y        +   +     +  +   +Y+ A   LE +L+        + 
Sbjct: 42  EGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYDRAEALLEGLLERDPVNTMVLS 101

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L +     GD ++A+ +  +AL++SP    +   + +  +   +   A+++  +  + +
Sbjct: 102 TLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARLRMEEGDVDEALSYAGEAYEIS 161

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +      +  I R        + +A    A+ S       + A    A++  +  +   
Sbjct: 162 PDKKEVLLLYAILRLESAPTDEEAVALGETALSSYPKDPYLLRA---LARAYEATQRYAD 218

Query: 279 AEVILEKIWKVNP 291
           A  +L  +   NP
Sbjct: 219 ALTLLSTLTAANP 231



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 9/158 (5%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    +      D+GD   +     ++L+   ++       A++ I   +  +AE +LE 
Sbjct: 29  AEAYFSLGNAYYDEGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYDRAEALLEG 88

Query: 286 IWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           + + +P        +A ++      +      +RAL L       V  L  ++++ +E G
Sbjct: 89  LLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELS---PGDVTILYNLARLRMEEG 145

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +D+A + A  A +I+P K+  LLL  I +  S  TD+
Sbjct: 146 DVDEALSYAGEAYEISPDKKEVLLLYAILRLESAPTDE 183



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 68/237 (28%), Gaps = 41/237 (17%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----------------EWN 222
           A    PD      ++   Y    ++SRA+    Q  + +                  E++
Sbjct: 21  ASSPRPDLAEAYFSLGNAYYDEGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYD 80

Query: 223 RNRAIL-------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           R  A+L             L   +     KGD   +      +L+L    +      A+ 
Sbjct: 81  RAEALLEGLLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARL 140

Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTV---GKLKRALRLEEINKESV 325
            + +    +A     + ++++P   E+  +Y  L  E+       +           +  
Sbjct: 141 RMEEGDVDEALSYAGEAYEISPDKKEVLLLYAILRLESAPTDEEAVALGETALSSYPKDP 200

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI------EQANSHNT 375
             L  +++          A           P   + F L A++      E     + 
Sbjct: 201 YLLRALARAYEATQRYADALTLLSTLTAANPEDPDAFFLRARLRLLYAGEVKEGLDD 257


>gi|254500721|ref|ZP_05112872.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222436792|gb|EEE43471.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 616

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G  ++A       LD+SP  P     +++  +   +   A T L++    +        
Sbjct: 2   AGRNDNAALLYESILDVSPGHPEALSGLIETRLANGDLEGAQTLLSK----STAVTGQDP 57

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             L   +  +        +      +L L      A++  A+ L S     +AE +L  +
Sbjct: 58  GFLTLAAKISIISQKPDDAEKLVERALALDPYHAQAALLKAEFLASAGALSEAEDLLNTV 117



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 4/171 (2%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                        LL+ +   +    + A + L  +          +  +       G  
Sbjct: 82  RALALDPYHAQAALLKAEFLASAGALSEAEDLLNTVRSRNTGDTDILLGISRLYYAYGLF 141

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A   A +AL  +PD   ++  V Q      +  +A +F      + KE        ++
Sbjct: 142 SPALMIAQEALSNAPDDSNLSAFVGQILTALGDHGKATSFFEAA--HLKEPTNPE--FML 197

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           A +   A  G    +   A  +  L  + + A +   K    + +  +A  
Sbjct: 198 ALANNAAAIGQSSEALRIAGRAKALFPDLMPAWLSYIKIKAERGEALEALR 248



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 2/127 (1%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            QI  A   +  A    E       T    + +L   +  IG  + A R A +A  + PD
Sbjct: 166 GQILTALGDHGKATSFFEAAHLKEPTNPEFMLALANNAAAIGQSSEALRIAGRAKALFPD 225

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                 + ++      E   A+       K AK+  R  A L +  +   A + +     
Sbjct: 226 LMPAWLSYIKIKAERGEALEALREFAPVAKGAKD--RMDATLTLGTAYRLAGEPEKAIQL 283

Query: 247 HDAIESL 253
            + + + 
Sbjct: 284 LEPLMAN 290


>gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120]
 gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120]
          Length = 311

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 63/209 (30%), Gaps = 16/209 (7%)

Query: 88  LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           L  GL +I A    +   A +    +       +  L   L  Q    +     A     
Sbjct: 49  LNQGLQAIQAGRLQDAIAAFQSAIQLDPNLAAAHYNLGLALR-QTGQLQ---PAADAFYR 104

Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                P        +     E     +L  A  Y  +AL++ P   +    +       +
Sbjct: 105 ATQSDPNFALAFANLGGSLLE---GNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQ 161

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            W  AI    +  + +K        L     +    +G +  + +   +++K+      A
Sbjct: 162 NWEGAIASFQKAVELSKNAPEPHYYL----GISYLQQGKLNEAKNAFNQAIKINPRYSEA 217

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291
                  L +Q + ++A     K  + NP
Sbjct: 218 YYNLGVVLFNQGQPQEALTAFRKSAEANP 246



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 11/164 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + A     AI       +         A       L     G +  +      + +   N
Sbjct: 56  IQAGRLQDAIAAFQSAIQLDPNL----AAAHYNLGLALRQTGQLQPAADAFYRATQSDPN 111

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313
             +A      SL+  N  ++A   L++  ++ P     H  +  +      +N  G +  
Sbjct: 112 FALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLV--RQQQQNWEGAIAS 169

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +  E++K + E    +    L+ G +++A      A+KI PR
Sbjct: 170 FQKAVELSKNAPEPHYYLGISYLQQGKLNEAKNAFNQAIKINPR 213


>gi|332969682|gb|EGK08698.1| cell division protein FtsH [Desmospora sp. 8437]
          Length = 455

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 1/110 (0%)

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
             +E+LK    +      AA+ LI   +  +   +LE+I +    P+  ++      +  
Sbjct: 28  AVLEALKFSPENHPLKRHAAQLLIQAGRHEEGIRLLEEILEKESEPDTVHLLAQAWYDQG 87

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             + K    L+   + + +  ++ +KIAL +    +A  +   A++  P 
Sbjct: 88  QFR-KAEACLQRTGEPTPQMRMLAAKIALALEDAQEAADRYQEALEEDPS 136


>gi|218683091|ref|ZP_03530692.1| hypothetical protein RetlC8_30431 [Rhizobium etli CIAT 894]
          Length = 462

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 73/237 (30%), Gaps = 24/237 (10%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                          L++ AT   A  +L     R+G++  A  +  +AL + P+ P   
Sbjct: 204 IAGAVEEELRCYRKALELRATYPEAHNNLGILLKRLGNVVEAAEHYREALRLWPNYPEGH 263

Query: 192 -------EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                  + V         +  AI      + +  +     A LL           D + 
Sbjct: 264 YNYAILLQEVGDISCAETHYRDAIRL----RPDFVDARLRYAGLL-------EANDDPVE 312

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTH 301
           ++    E L+L      A+      L        AE    +   +   P+ A     Y  
Sbjct: 313 THCQYREVLRLRPGFAEANNNYGVFLERMGDTADAEAHYVRA--LEHQPDYAEAHYNYAM 370

Query: 302 LLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           LL    + + K             VE+   ++ +  E G +  A    + A+++ P 
Sbjct: 371 LLEPGDLRRAKEEYRAAIRARPNYVEAHNNLAVLLHENGDLPAAERHYLAALQLKPD 427


>gi|330988918|gb|EGH87021.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 1298

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 90/295 (30%), Gaps = 60/295 (20%)

Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156
            A +       ++   N  L   L + +   A+ Q   A   L +   + P     R   
Sbjct: 334 RATRQPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213
              L     + G L++AQ    + L      P     ++       +   A+  L+    
Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++    +  R +A+     +     +GD+ A+     +++K   +++      A+  + 
Sbjct: 450 GEQAKLGDSGRFKALRSAQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509

Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298
            ++  KA V+++++ K  P                                   P++  +
Sbjct: 510 TDEAPKAHVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569

Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              +                     L    RL+ +   S E  + ++   ++ G 
Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGE 624



 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 89/289 (30%), Gaps = 61/289 (21%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL    +  A E     L+I A    A+  L     +   L  A++  T+A      A W
Sbjct: 285 ALERNDHAAAEEAFAARLKIKADDVDALGGLGVVRQQQNRLPEAEQLLTRATRQPGGARW 344

Query: 190 ------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNR 223
                       + +A         +  +A   L Q ++   +                +
Sbjct: 345 KNALENVQLWTSLQQAR-DLQA-KGQTGKAQALLAQAQRENPDNIDVRLTLADVQVQAGQ 402

Query: 224 NRAILLIARSLENADKGDM---------IASYHDAIESLKLCDNSIMA------------ 262
             A     R +  + +G+          +A    A E+L+L D                 
Sbjct: 403 LDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQAKLGDSGRFK 462

Query: 263 ---SICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRA 314
              S   A+    +   R A+  L+   K +P       ++A +Y  L ++         
Sbjct: 463 ALRSAQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLY--LKTDEAPKAHVLI 520

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMKIAPRKEIF 361
             L +    ++++L   + +++EMG    A      +   +  P  +  
Sbjct: 521 DELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569


>gi|330721300|gb|EGG99385.1| hypothetical protein imdm_1171 [gamma proteobacterium IMCC2047]
          Length = 925

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 38/267 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   +       +A      AL + P+         Q YV  ++   AI  L+      
Sbjct: 172 GLARIAMFEKAYETAAPLLENALKLEPNNFDALITQSQLYVAQQQPQAAIKPLDHALSLD 231

Query: 219 KEWNRNRA------------------------------ILLIARSLENADKGDMIASYHD 248
                 R                               +     +     +G   A+   
Sbjct: 232 PFLQSARVMRSELYVRTNQLDKARKDANTLLEQNPNNGLAHFILARLLLSEGKYKAAQTA 291

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303
           + ++L+     +M       S  +Q    +A+  LEK     P   IA      +Y  L 
Sbjct: 292 SEKALRAIPEHLMTHFILGASHYAQGNFERAQFYLEKFVAAQPSHLIANRLMGAVYLQLK 351

Query: 304 S-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
              + V  L   ++    N +  + L ++ +  L+ G  ++      LA++I P  E   
Sbjct: 352 DANSAVQLLDGFVQ--RTNTKDAQLLNLLGRAYLQAGDYNRGTEMLNLALEIDPAIENTR 409

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAM 389
               I Q  S + +  +   ++A+   
Sbjct: 410 TQLAIGQIASGDINSAISELENAVTRP 436



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 55/318 (17%), Positives = 108/318 (33%), Gaps = 45/318 (14%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A ++     Q+    +  L+ LL  +  L    YN   E L + L+I    E    
Sbjct: 352 DANSAVQLLDGFVQRTNTKDAQLLNLL-GRAYLQAGDYNRGTEMLNLALEIDPAIENTRT 410

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKN 217
            L       GD+NSA      A+   PDA   T  ++   Y+  +++  A   +++    
Sbjct: 411 QLAIGQIASGDINSAISELENAVT-RPDATEQTNIMLILSYLNQQQYDNAFAAIDKAIAQ 469

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM---------------- 261
             +        L  +++   ++ +  A+     ++L + D  I                 
Sbjct: 470 YPKSP----AFLNLKAIAYENQQNTEAAREAYQQALAIDDQFIPALLALAKLEARNKQFD 525

Query: 262 AS------------------ICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYT 300
           A+                  +  A+     N  +     LEK    NP    P    +  
Sbjct: 526 AAKAHINNALKINKNHLQSHLLMAQIAGLNNNPKALVSSLEKARDGNPSAYQPVSLLVNY 585

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +L + + V   + A R       +  SL ++++++L     D+A +  +  +    +   
Sbjct: 586 YLQTNDLVKARREASRFYTAQGRNAGSLSLMARVSLAANEADKARSYLLEIIDSNEQDIN 645

Query: 361 FLL-LAQIEQANSHNTDK 377
             L LAQ+E       D 
Sbjct: 646 HRLQLAQLEINEKQYDDA 663



 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 22/261 (8%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A +    +L+       A + L       G   +AQ  + KAL   P+       +  
Sbjct: 252 DKARKDANTLLEQNPNNGLAHFILARLLLSEGKYKAAQTASEKALRAIPEHLMTHFILGA 311

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            +     + RA  +L +            + L+  R +     G +     DA  +++L 
Sbjct: 312 SHYAQGNFERAQFYLEKFVAAQP------SHLIANRLM-----GAVYLQLKDANSAVQLL 360

Query: 257 DNSIMAS--------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           D  +  +            ++ +      +   +L    +++P  E       +    + 
Sbjct: 361 DGFVQRTNTKDAQLLNLLGRAYLQAGDYNRGTEMLNLALEIDPAIENTRTQLAIGQIASG 420

Query: 309 GKLKRALRLEEI--NKESVE-SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                   LE      ++ E + +++    L     D A A    A+   P+   FL L 
Sbjct: 421 DINSAISELENAVTRPDATEQTNIMLILSYLNQQQYDNAFAAIDKAIAQYPKSPAFLNLK 480

Query: 366 QIEQANSHNTDKILYWTQSAL 386
            I   N  NT+      Q AL
Sbjct: 481 AIAYENQQNTEAAREAYQQAL 501



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 3/134 (2%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A   +  +     +     +      +LKL  N+  A I  ++  ++Q + + A   L+ 
Sbjct: 167 AYANVGLARIAMFEKAYETAAPLLENALKLEPNNFDALITQSQLYVAQQQPQAAIKPLDH 226

Query: 286 IWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              ++P  + A +     ++ +       K A  L E N  +  +  I++++ L  G   
Sbjct: 227 ALSLDPFLQSARVMRSELYVRTNQLDKARKDANTLLEQNPNNGLAHFILARLLLSEGKYK 286

Query: 343 QAHAKAMLAMKIAP 356
            A   +  A++  P
Sbjct: 287 AAQTASEKALRAIP 300


>gi|29169143|gb|AAO66317.1| adventurous gliding protein T [Myxococcus xanthus]
          Length = 478

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 7/224 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y     K +  L+       A Y+L   + R G L  A+ +   AL   P     +E +
Sbjct: 75  DYPSLERKFQSALEADGNLAEADYNLGVLAERQGKLTEARNHYKTALTKKPSLRQASENL 134

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                 A   + A+    +  +   +  ++RA L    +     +GD   +      +L 
Sbjct: 135 AVMEQNAGNVAGAVALYQEVLQRYPDDAQSRARL----AEIFRQQGDHTKAMDLTRAALM 190

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPEI--ANIYTHLLSENTVGKL 311
               S  A     +S + + +   A+++ L  +      PE+  A     L   +     
Sbjct: 191 RDPQSTTALKVMIRSYLDRKQLAMAKLVALRGVKLDAADPELHHAVGLILLQEGDVDDAR 250

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               +  E+ ++ V S V ++++AL   +   A       ++  
Sbjct: 251 LSFKKALEVREDYVPSHVELAQLALAAENYPTAEQHLRRILQAD 294


>gi|268317298|ref|YP_003291017.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
 gi|262334832|gb|ACY48629.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 402

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 89/274 (32%), Gaps = 26/274 (9%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLY 161
           A+ +    S      +E  +Y L+ ++     Q++ A    + +LQ        + ++L 
Sbjct: 53  AQALALADSAARYDSDEPAIYFLQGRLYAEMAQFDRAEAAYQEVLQRDP-NFRGIWHNLA 111

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
               R      A     K L   P AP   +A+ + Y        A     Q  +    +
Sbjct: 112 NLKARQHRFREAIALYQKELQRYPGAP-TWQAMARAYRELGVVDSAAYAYRQALQLDSTY 170

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-- 279
                   I  +    D+G    +   A  +  L  ++   +    + L+   +  +A  
Sbjct: 171 ----VPAYIGMTQLLDDEGRFAEALTYAQRAQALDPDNPETNYLLGELLMKNGRFAEALP 226

Query: 280 --EVILEK-IWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEIN-------------K 322
             + ++E   W    H  +      +   E     L+R  +L E+N              
Sbjct: 227 YLQRVVEAWPWHAGAHYSLGQALLRVGRREEGEAALQRYEQLRELNAQVQMLEEAVRTTP 286

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++  +   +       G  ++A     +A+ ++P
Sbjct: 287 DNPYAFAALGAALRRSGRYEEALRAYTIALFLSP 320



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 82/246 (33%), Gaps = 15/246 (6%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             +        + A       LQ+ +T   A   +       G    A  YA +A  + P
Sbjct: 143 MARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQLLDDEGRFAEALTYAQRAQALDP 202

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAILLIARSLENADKG 240
           D P     + +  +    ++ A+ +L +  +         ++  +A+L + R  E     
Sbjct: 203 DNPETNYLLGELLMKNGRFAEALPYLQRVVEAWPWHAGAHYSLGQALLRVGRREEGEAAL 262

Query: 241 DMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292
                  +         E+++   ++  A      +L    +  +A         ++P +
Sbjct: 263 QRYEQLRELNAQVQMLEEAVRTTPDNPYAFAALGAALRRSGRYEEALRAYTIALFLSPGN 322

Query: 293 PEIAN--IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           PEI N     + +  +T+  ++   R  + +   +++ + +  +    G    A      
Sbjct: 323 PEILNNLAALYFVQGDTLAAMQTYRRALQADSTFIDAWLNLGVLHALRGERAAAAYAWRQ 382

Query: 351 AMKIAP 356
            ++  P
Sbjct: 383 VLRYDP 388


>gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413]
 gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 605

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 80/302 (26%), Gaps = 57/302 (18%)

Query: 126 EVQIALAER-------QYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRY 176
           + Q              Y  A     + +   P       V         +GD  SA   
Sbjct: 282 DAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVR--ANIHRHLGDYPSALAD 339

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             + L + P+                ++  AIT  NQ  +         A     R++ +
Sbjct: 340 GNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNI----AEAYYGRAIAH 395

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               D+I +  D   S+++  +   A      +       + A     +   +N   +++
Sbjct: 396 EALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINT--QLS 453

Query: 297 NIY-----------------------THLLSENTVGKLKRALRLEEI------------- 320
             Y                         L  E+      RA     +             
Sbjct: 454 EAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADYTQS 513

Query: 321 ---NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTD 376
              N    E      +  L +G +++A A    A+K  P     +LL A I +       
Sbjct: 514 IAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRADILRNRGDYQA 573

Query: 377 KI 378
            I
Sbjct: 574 AI 575



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 6/135 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAKEWNRN 224
           D  +A     +AL I+P            Y+   ++ +AI      +      A   N +
Sbjct: 86  DFTAAIADYDQALQINPTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINED 145

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A     R L N+D G+   +  D  ++L+       A            + R+A    E
Sbjct: 146 IANAYYYRGLHNSDHGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHE 205

Query: 285 KIWKVNPHPEIANIY 299
           +  +++  P +A  Y
Sbjct: 206 RAVQLD--PNLAEAY 218


>gi|326387363|ref|ZP_08208972.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208019|gb|EGD58827.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 502

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 87/288 (30%), Gaps = 12/288 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +   ++  A ++      +          +    IA  + Q + A            TR 
Sbjct: 163 LEGGDLDEADRV--LAIMRRLGPGRLDTLMTAGLIAQHKGQLDQASAAFRQAADRFRTRP 220

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             + +L   +   G ++ A  YA KA + +P  P V   VV+      EW +    L   
Sbjct: 221 EPIVALADIADMQGHVDVAAGYAAKANERAPGDPQVEALVVRVAAEKGEWQKVRDIL--- 277

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
               ++    R    +A      + G    +     ++L L   +  A +  A+S ++  
Sbjct: 278 -APREDSLDVRTFEGLAYGEALLNLGRPEQARAIYAKALLLSPQNPYARLMLAESQLAAG 336

Query: 275 KKRKAEVILE----KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
               A   +      +       ++A       S+   G     L   ++   S  S   
Sbjct: 337 ASADALRTVRPLADSVLAGQRELDLAVRAAQAASDPVAGAYAARLHSPQLAVNSALSGRA 396

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           ++  AL                      E+   +A+ E     + + I
Sbjct: 397 MA--ALARRDWPAVIEAYRAIPGYDNDAEVLKRMAEAETGLGRHDEAI 442


>gi|323182682|gb|EFZ68084.1| cellulose synthase operon protein C [Escherichia coli 1357]
          Length = 1157

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|193068462|ref|ZP_03049424.1| cellulose synthase operon protein C [Escherichia coli E110019]
 gi|192958113|gb|EDV88554.1| cellulose synthase operon protein C [Escherichia coli E110019]
          Length = 1157

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|166712375|ref|ZP_02243582.1| hypothetical protein Xoryp_13205 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 392

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 90/303 (29%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI    + ++   +   +  +      +  N   G    +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEQVTGEPMGKLISQFECELADRNRGLGKTDDALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              +      S+ A I   +    +     A    E+  + +P       P +   Y  +
Sbjct: 208 IARAYHADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
              +       A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GDISG------ARNFLSEMTEHYRGIAPVLALTQLIEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L  +  A   +    L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|78224407|ref|YP_386154.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
 gi|78195662|gb|ABB33429.1| TPR repeat protein [Geobacter metallireducens GS-15]
          Length = 643

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 91/277 (32%), Gaps = 47/277 (16%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E L+ L E Q A      + A    + ++++        Y+L     R G ++ A     
Sbjct: 302 EALMRLAEAQTA--AGFDDEAITSYKELIRLKLGTGDTHYNLGVLYERKGLIDEAVVEYK 359

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +A+  SPD       +   Y L   + +AI    +  K       N  +L +  +     
Sbjct: 360 QAIHSSPDNGDARRRLADIYALRGSYPQAIEQYRELLKKGD----NNPVLHLKLARALLG 415

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----------------- 281
             +   +     ++LK+  +++ A    A      N+  +AE                  
Sbjct: 416 AKNPKEAMASYQDALKIAPDNLEARRELAALYRKGNQNEEAEKQYKEILRIKKDDAEARN 475

Query: 282 -----------------ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319
                            +L+   ++ P     H ++  IY      +     +   +  E
Sbjct: 476 ILTALYVKSKKYDELITLLKDGVELAPNDPASHYKLGLIYEFKKDYDAAE--QEYKKAVE 533

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  +  +SL  + +I L+ G I +A      A K  P
Sbjct: 534 LKGDHAKSLNALGRIYLKTGKISEAKGALEAAKKADP 570



 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 4/188 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + +  Y        N  +++L   +  L  +    A    +  L+I      A   L   
Sbjct: 387 QAIEQYRELLKKGDNNPVLHLKLARALLGAKNPKEAMASYQDALKIAPDNLEARRELAAL 446

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +      A++   + L I  D       +   YV +K++   IT L    K+  E   
Sbjct: 447 YRKGNQNEEAEKQYKEILRIKKDDAEARNILTALYVKSKKYDELITLL----KDGVELAP 502

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N         L    K D  A+  +  ++++L  +   +     +  +   K  +A+  L
Sbjct: 503 NDPASHYKLGLIYEFKKDYDAAEQEYKKAVELKGDHAKSLNALGRIYLKTGKISEAKGAL 562

Query: 284 EKIWKVNP 291
           E   K +P
Sbjct: 563 EAAKKADP 570



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/254 (11%), Positives = 70/254 (27%), Gaps = 68/254 (26%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V  L   + R G  + A +   +AL + P  P     +    +       A+  L +   
Sbjct: 69  VRGL--RAERAGRHDEAIKDYREALRLEPAFPRAQGNLGLALLAKGSHDDAVVELTRAIS 126

Query: 217 NAKEWNRNRAILL-----------------------------IARSLENADKGDMIASYH 247
           +  +   +  + +                                +    + G +  +  
Sbjct: 127 SDPDPGYHHGLAMIFGQRKIYSLALYHYAEAAKGLPADPVIPTELAALYREMGKVSDAEK 186

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302
              ++L L  +   A +  A   +++ +  +A   L++    +P        +A  Y   
Sbjct: 187 QYRKALSLSPSHEEARVGLASLYMAEGRTDRAIEELKQAQIASPGNKEVSSLLAEAYEKK 246

Query: 303 LSENTVG----------------KLKRALRLEEI----------------NKESVESLVI 330
                                  +L+R   L +                   +  E+L+ 
Sbjct: 247 GDRQAADYQSLLAGKQRGVLSDERLRRGDELMQAKEYAKAAEEFKAALREKPDWPEALMR 306

Query: 331 VSKIALEMGSIDQA 344
           +++     G  D+A
Sbjct: 307 LAEAQTAAGFDDEA 320



 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 98/306 (32%), Gaps = 40/306 (13%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
           Y         + ++      +     + + A ++    L +  + E A   L       G
Sbjct: 154 YAEAAKGLPADPVIPTELAALYREMGKVSDAEKQYRKALSLSPSHEEARVGLASLYMAEG 213

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQKKKNAKEWNRNRA 226
             + A     +A   SP    V+  + + Y    +   A   + L  K++      R R 
Sbjct: 214 RTDRAIEELKQAQIASPGNKEVSSLLAEAYEKKGDRQAADYQSLLAGKQRGVLSDERLRR 273

Query: 227 ILLIARSLE-----------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS--- 272
              + ++ E             +K D   +     E+          +I + K LI    
Sbjct: 274 GDELMQAKEYAKAAEEFKAALREKPDWPEALMRLAEAQTAA-GFDDEAITSYKELIRLKL 332

Query: 273 -QNKK---------RKA---EVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLK 312
                         RK    E ++E    ++  P+       +A+IY   L  +    ++
Sbjct: 333 GTGDTHYNLGVLYERKGLIDEAVVEYKQAIHSSPDNGDARRRLADIYA--LRGSYPQAIE 390

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
           +   L +    +    + +++  L   +  +A A    A+KIAP        LA + +  
Sbjct: 391 QYRELLKKGDNNPVLHLKLARALLGAKNPKEAMASYQDALKIAPDNLEARRELAALYRKG 450

Query: 372 SHNTDK 377
           + N + 
Sbjct: 451 NQNEEA 456


>gi|260582651|ref|ZP_05850440.1| tetratricopeptide domain-containing protein [Haemophilus influenzae
           NT127]
 gi|260094323|gb|EEW78222.1| tetratricopeptide domain-containing protein [Haemophilus influenzae
           NT127]
          Length = 396

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALLVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE +   NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVKILENVLDQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + ++K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339


>gi|190572244|ref|YP_001970089.1| putative transmembrane HemY porphyrin biosynthesis protein
           [Stenotrophomonas maltophilia K279a]
 gi|190010166|emb|CAQ43774.1| putative transmembrane HemY porphyrin biosynthesis protein
           [Stenotrophomonas maltophilia K279a]
          Length = 431

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 129/394 (32%), Gaps = 20/394 (5%)

Query: 4   LIRYFFVISLVICSFIIVS----HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           L+     +++ + +   +     +   +V++ +G   Y ++   +  +    +    LL+
Sbjct: 7   LVVLLLAVAIGVVAAQWLGADDLNRFGEVTLRYGGYDYHSNLPKVALLSVIAVLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           ++                +    +G   L  GL +        A K+    ++       
Sbjct: 67  SLIAAPF-------RAWGRYRRKQGRVRLIDGLQAYEHGQWQRAEKLLDGAAKDPEVSAV 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178
            L     V+ A A          L+ + +  AT +  + +    +  +  D  +A   A 
Sbjct: 120 ALAN--AVRSAQARADGPAGEALLQRLGESDATLQALLRAEQLLARDLPVDAINALDVAA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
               + P   W+    + +   A E    +  L Q K    E N      L A++L  A 
Sbjct: 178 -IQPLPPRGLWLRTEALARAGRAHEAYGQLGALRQSKVLPAESNSELEARLAAQALLEAA 236

Query: 239 KGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             + +A+  +A  ++L+   + + A    A   ++ N    A + LE+        E+  
Sbjct: 237 DVNALAAQWEATPKALRPTPDVVGAYASRA---VALNWDEPALLALEQALDQRWDDELVA 293

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +Y  L +E    +     R   ++  S    +   ++AL     D A      A+     
Sbjct: 294 LYGRLPAERLATRQANLARWRNVHDGSAALHLAQGRVALAQQQWDAADTFLHEAIAAGAG 353

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +  L ++  A             +AL     
Sbjct: 354 APAWEALGEL-FAQRGEHALAAQCLANALRLQRG 386


>gi|119595584|gb|EAW75178.1| chromosome 20 open reading frame 14, isoform CRA_e [Homo sapiens]
 gi|119595585|gb|EAW75179.1| chromosome 20 open reading frame 14, isoform CRA_f [Homo sapiens]
          Length = 882

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 520 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 577

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 578 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 637

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 638 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 697

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 698 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 755

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 756 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 813

Query: 391 D 391
           D
Sbjct: 814 D 814



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 229 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 285

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 286 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 337

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 338 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 390

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 391 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 436


>gi|254520886|ref|ZP_05132941.1| tetratricopeptide repeat domain protein [Stenotrophomonas sp.
           SKA14]
 gi|219718477|gb|EED37002.1| tetratricopeptide repeat domain protein [Stenotrophomonas sp.
           SKA14]
          Length = 689

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 58/203 (28%), Gaps = 7/203 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A + A       P        +            A+  L Q  + A + 
Sbjct: 6   IQALRQNQADQAVQLAQAWTRDEPGLADAHRWLALALQQQGNAEAAMEALQQALRLAPD- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L +  +           +    + +  L  N+  A +  A   I +N   +A+ 
Sbjct: 65  ---DAQLHLQHAGLLLALRQFEGADEALLRTTGLDPNAFSAYLMQAHLAIGRNDFDEAQR 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     +V P HPE+  I     L   +    L       +   +    L  +    L  
Sbjct: 122 LSTLAGRVEPEHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGK 181

Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361
             +  A       +++ P     
Sbjct: 182 DMLAFAEQSFRRVLELNPSLSSL 204



 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL + Q + A +  +   +       A   L     + G+  +A     +AL ++PD   
Sbjct: 8   ALRQNQADQAVQLAQAWTRDEPGLADAHRWLALALQQQGNAEAAMEALQQALRLAPDDAQ 67

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +        +  +++  A   L +      + N   A L+  ++     + D   +   +
Sbjct: 68  LHLQHAGLLLALRQFEGADEALLR--TTGLDPNAFSAYLM--QAHLAIGRNDFDEAQRLS 123

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI-ANIYTHLLSEN 306
             + ++               + +    +A  +L    K  P     + A  + +L  + 
Sbjct: 124 TLAGRVEPEHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDM 183

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                +   R+ E+N        +V ++AL  G++  A     +A++ 
Sbjct: 184 LAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVPAAAEAVQVALQQ 231



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 41/270 (15%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQ------------------------------QHTFHNE 119
            G++++   +   A  + S  S+                              +    N 
Sbjct: 140 DGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDMLAFAEQSFRRVLELNP 199

Query: 120 YLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176
            L  L  L VQ+AL +     A E +++ LQ P     A+  L  E + R      A  +
Sbjct: 200 SLSSLHGLVVQLALRQGNVPAAAEAVQVALQQPELDVPAMRRLAGELALRNSQPLQALDH 259

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
               LD  P+   V + ++  +        A   L+      +  ++   + L   ++E 
Sbjct: 260 LLPLLDTQPEDRQVLQLLLMSWQRLGREDEARARLDAVL---EAHDQLHDVWLARLAIEQ 316

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                 +A+    + ++      + A     +      ++ +AE I E+I  + P     
Sbjct: 317 VGSAGAVAAVERWMAAM---PAHLPALEARLRLHDMVGERAQAEAIAERIVSLEPGRVSG 373

Query: 297 NIYT--HLLSENTVGKLKRALRLEEINKES 324
                  LL  +    + R   L E   E+
Sbjct: 374 ETRLVEGLLQRDPAAAVARVQALIEQAPEA 403


>gi|153006228|ref|YP_001380553.1| hypothetical protein Anae109_3385 [Anaeromyxobacter sp. Fw109-5]
 gi|152029801|gb|ABS27569.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 427

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 77/227 (33%), Gaps = 10/227 (4%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            +     K   +L      E   Y+L     + GDL  A+    +AL   P        +
Sbjct: 68  DWEHLERKWRAVLDAEEIPEA-RYNLGVALEQQGDLAGARAAYERALAAKPSLRHAAVNL 126

Query: 195 VQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                   +   A T      ++  ++      +  + R+    D+     ++  A E+L
Sbjct: 127 GVLLEKQGDARAASTVYAAAVRDFPEDPIARERLAALYRASGQLDE-----AWRLAREAL 181

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSENTVGK 310
                S+ A+   A+  + + +   A +I  +  K+ P  PE+            + VG 
Sbjct: 182 LRDPTSVGANKVLARVALQRGELDLANLIALRTQKLAPKDPELPFVAGLVLARRGDEVGA 241

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +  +   +  + + +   + + A+   +       A   +++ PR
Sbjct: 242 AAQYRKALALAGDYLPARHALLEAAIRNQAWGAVAEHASAILRVEPR 288


>gi|283787827|ref|YP_003367692.1| cellulose synthase operon protein C (TPR-repeat-containing protein)
           [Citrobacter rodentium ICC168]
 gi|282951281|emb|CBG90976.1| cellulose synthase operon protein C (TPR-repeat-containing protein)
           [Citrobacter rodentium ICC168]
          Length = 1232

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 7/196 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    I  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 424 QGDAALKANDIDQAERLYQQARNIDNTDSYAVLGLGDAAMARKDYPAAERYYQQTLRMDS 483

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI---LLIARSLENADKG 240
                    A + +    ++ S  I  L+  ++ + + +  R +    L  ++     +G
Sbjct: 484 GNTNAVRGLANLYRQQSPEKASAFIATLSASQRRSID-DIERGLENDRLAQQAETLESQG 542

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299
           +   +       L L   S+  +   A+ L    ++ +A+  +  + +  P+ PE    Y
Sbjct: 543 NWAQAAELHRRRLALDPGSVWITYRLARDLWQAGQRSQADAQMSALARQKPNDPEQVYAY 602

Query: 300 THLLSENTVGKLKRAL 315
              LS     +   A 
Sbjct: 603 GLYLSGAERDRAALAH 618



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 105/349 (30%), Gaps = 61/349 (17%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A++I  A +++          +  ++ L     A+A + Y  A    +
Sbjct: 419 WLAIQQGDAALKANDIDQAERLYQQARNIDNTDSYAVLGL--GDAAMARKDYPAAERYYQ 476

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+         A +A 
Sbjct: 477 QTLRMDSGNTNAVRGLANLYRQQSPEKASAFIATLSASQRRSIDDIERGLENDRLAQQAE 536

Query: 182 DISPDAPWVTEAVVQQYVLAKE----WSR---AITFLNQKKKNAKEWN------------ 222
            +     W   A + +  LA +    W     A       +++  +              
Sbjct: 537 TLESQGNWAQAAELHRRRLALDPGSVWITYRLARDLWQAGQRSQADAQMSALARQKPNDP 596

Query: 223 ---RNRAILLIARSLENADKGDMIASYHDAIESL--KLCDNSIMASIC-AAKSLISQNKK 276
                  + L     + A    + A       +   +L +      +   A  L    K+
Sbjct: 597 EQVYAYGLYLSGAERDRAALAHLNALPRSQWNANIQELAERLQSNQVLETANRLRDSGKE 656

Query: 277 RKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +AE +L    +  P     ++    +     +    +      L     ++V++L+ ++
Sbjct: 657 AEAEALL----RQQPASTRLDLTLADWAQQRRDYATARGDYNRVLAR-EPDNVDALLGLT 711

Query: 333 KIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           ++ +  G    A    A L     P   +   +A + Q    +T     
Sbjct: 712 ELDIAQGDKAAARARLAKLPATAEPSISVQRRVA-LAQMQLGDTAAAKQ 759


>gi|240116510|ref|ZP_04730572.1| hypothetical protein NgonPID1_09811 [Neisseria gonorrhoeae PID18]
 gi|268602183|ref|ZP_06136350.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268586314|gb|EEZ50990.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
          Length = 389

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/357 (14%), Positives = 107/357 (29%), Gaps = 69/357 (19%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDA------PWVTEAVVQQYVLAKEWSRAITF 210
              L+  +       SA     +A  I              + ++  Y   ++W +A+  
Sbjct: 112 ARVLFELAQN---YQSA-GLVDRAEQIFLGLQDGEMVREARQHLLNIYQQDRDWEKAVET 167

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC----------- 256
                 + + +    A      +     K +  A+      A+E+ K C           
Sbjct: 168 AQLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIE 227

Query: 257 --DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL-- 311
               +  A++  A + I Q       ++ EK         +   Y      E  + +L  
Sbjct: 228 HRQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTG 277

Query: 312 --KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----L 364
             +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L
Sbjct: 278 YMQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKL 329

Query: 365 AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
           + ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 330 SDLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|268317849|ref|YP_003291568.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
 gi|262335383|gb|ACY49180.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 785

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 83/287 (28%), Gaps = 54/287 (18%)

Query: 125 LEVQIA----------LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           L  Q A          LA   Y  A E     L++ AT   A   +   +    + + A 
Sbjct: 23  LYAQSAAQLVDEGHDWLARGAYQEAEETYREALELDATYLPAYLGMIRLAMARENWHEAS 82

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----EWNRNRAILL 229
            +A +AL I   +  V   +        ++     F ++++           +     +L
Sbjct: 83  DWAGRALKIDSSSLAVHYFLGISERERAQYQTPFQFTHRRESRKHFEWVLARDSLYRDVL 142

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKI 286
              +L     GD   +   A   ++L  +   A+I   +     ++      A       
Sbjct: 143 YQYALLYRQDGDYPRAITLAEAQVRLRPDLEEAAIGLFRIYQSYLNHTDLDTAGR----- 197

Query: 287 WKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           W    HP + A  +          +L+R  +L                        D A 
Sbjct: 198 WLAQ-HPTDYARFF-------EAERLRRLGQL---------------------READAAL 228

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
                     P + I L+ A++  A       +      A+  +  P
Sbjct: 229 RTLERPDFPWPSQAIALIRARVWAALDRPD-SVQAIIDRAIRTINGP 274


>gi|254522242|ref|ZP_05134297.1| heat shock protein [Stenotrophomonas sp. SKA14]
 gi|219719833|gb|EED38358.1| heat shock protein [Stenotrophomonas sp. SKA14]
          Length = 392

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 19/299 (6%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++       A R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVNRHDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             + ++  Y   ++W +AI    + +    +   +         +      G +  +   
Sbjct: 148 ALKHLIGIYQAERDWEKAIDNATRFEDVTGEPMGKLIGQFECELAERFRGAGKLEEARAA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306
              + +    S+ A I   +          A    E+  + +P   PE+      + +  
Sbjct: 208 IARAYQADAMSVRAGIIEGRLETDAGNAEAAVRAFERAARNDPEYLPELLPAL--MANYR 265

Query: 307 TVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            VG L  A        E    +   + ++++  E   +  A A     +K  P       
Sbjct: 266 KVGDLAGARAFLSEMTEHYRGIAPVLALTRLMEEQEGVAPARAYLGRQLKDRPSVRGESA 325

Query: 364 LAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTLCY 417
           L  +  A   ++   L+  +     +   +P +       G  +  W    P  K    
Sbjct: 326 LIDLTLAEGADSTATLHDLKHITDQLLVRNPAYRCTRCGFGARTHHWQ--CPSCKEWGT 382


>gi|262199117|ref|YP_003270326.1| hypothetical protein Hoch_5958 [Haliangium ochraceum DSM 14365]
 gi|262082464|gb|ACY18433.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365]
          Length = 2620

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 113/310 (36%), Gaps = 17/310 (5%)

Query: 96   AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A+      R++     ++H    E L  LLE+  A       +      + ++    +  
Sbjct: 2301 ASGETGRTRELLVGWVERHPEDREPLYTLLEMDKASENWNGVLDICTRLVAIEEGEAQVK 2360

Query: 156  AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            A   L   + +      A +    A +  P++  + + + + Y L+  + +  T L    
Sbjct: 2361 AALELADAAEKTERPGEALQALETAHEAQPNSGELRDRLRRIYELSGAFDKLATVLLADG 2420

Query: 216  KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             +A++ +        A  +     G+  A+   A ++  L       ++     L    +
Sbjct: 2421 DHAEDADVRYDAYRRAAEVLLFSLGNPQAAMVPAQKARDLKPEEHDGTVLYVDILTMSGE 2480

Query: 276  KRKAEVILEKIWKVNPH----PEIAN-----IYTHLLSENTVGKLKRALRLEEINKESVE 326
              +A  +LE+   +  H    P++A           +  +  G+L       ++++++ E
Sbjct: 2481 TDRAIALLEEA--IGQHKRRSPQLAALKQRMARVAAVLGDRDGQLSWLKESFDVDRKNPE 2538

Query: 327  SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-----AQIEQANSHNTDKILYW 381
                ++++A E+G  D A         +   + I  ++     A+IE A   N  K   W
Sbjct: 2539 IAAELAQLATEVGDYDLALKPLRAITLMEDPQPITRVMAFLWEAKIEHA-RGNNAKAELW 2597

Query: 382  TQSALHAMPD 391
             + AL   P+
Sbjct: 2598 ARKALREDPE 2607



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 80   NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
              ++G + L     +   +    A  +    + +        V  L  ++A +     + 
Sbjct: 1702 RREQGIELLEKAFAAEPRYQQAGAS-LEKAAAAEPDSDR---VMALYERVARSAGDPQML 1757

Query: 140  HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-------DAPWVTE 192
             + LE   Q        V      +        A+    +A++ +         A W   
Sbjct: 1758 LDFLERRAQRSDATPTQVREAVDVALAQNQAQRAEALLGRAVEAARSSDEGIAGAVWAVM 1817

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A+ +  V   +++ A   +++  + A     +R +L +A     ADKG     Y    E
Sbjct: 1818 ALAETRVATGDFASARELVHEAAEYADPEKFDRLVLDLAVKARGADKGLAAEMYELLRE 1876


>gi|167041671|gb|ABZ06416.1| putative TPR domain protein [uncultured marine microorganism
           HF4000_009L19]
          Length = 516

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/171 (11%), Positives = 55/171 (32%), Gaps = 4/171 (2%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  + +    +Y  A +    ++     R   +Y +   S R+G+++ A+    + +  S
Sbjct: 337 LVARTSFRVGEYEKAIDYYRRLIDADPRRVQPLYQIGLASLRLGNVDDAREAFEQVVARS 396

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P        +      + +   A+               +  ++L        + G    
Sbjct: 397 PTHVLAQFNLGMARFRSGDVGAALRNFQAA----SGLAGSDPVVLRQLGNAAVEAGQFWL 452

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +      ++        A I  A++  +  +  +A     +  ++ P  ++
Sbjct: 453 ASDVLDRAVAASPTLASAWIDKARAHRAGGQIDRARESYTRALELEPTNDL 503


>gi|221134674|ref|ZP_03560977.1| sulfotransferase [Glaciecola sp. HTCC2999]
          Length = 655

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 83/260 (31%), Gaps = 21/260 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           YLL  Q A  E +   A       LQ   +    +  L   + ++  L+ AQ     A  
Sbjct: 143 YLLAAQSAFYEGRLAKAETLTREFLQKNPSHVPGMRLLAKIAVKLNILDDAQILLENATV 202

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           I+P +  +   ++Q     + +S+A     Q            A+  +A + +    G+ 
Sbjct: 203 IAPHSTDLKLELIQVLQQRQLFSKAHELALQTYLENP----KHALSELAYANQCVAIGNT 258

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             + +     L    +     +    +  +  +  KA     +  ++   P+  + Y  L
Sbjct: 259 AIAINHFTNVLSELTSHAAVYVQRGHAYKTIGEPDKAIADYVQASELK--PDFGDAYWSL 316

Query: 303 L-------SENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLA--- 351
                   S+  +  +K  L    I   +       + K   +     QA +        
Sbjct: 317 ANLKTFVFSDAQINTMKTMLARPGIQPTDKYHICFALGKAFEDHQDYAQAFSYYEQGNTL 376

Query: 352 ----MKIAPRKEIFLLLAQI 367
               ++  P +    L AQI
Sbjct: 377 KHQQLRYNPDETTQQLQAQI 396


>gi|332971134|gb|EGK10099.1| hypothetical protein HMPREF0476_0778 [Kingella kingae ATCC 23330]
          Length = 707

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 10/267 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  +IA  +     +       L+   + E A  +    + +      A+    +  +I
Sbjct: 161 LLAGEIAHTQGDARTSLGLYLTTLKHSRSPEVAERA-MELAIQARAYPIAEAIYQQWQEI 219

Query: 184 SPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            P +      + + + +   E    +  L      +    + R  +++A+     D    
Sbjct: 220 EPQSSPALRRLALGRALAVGEAEPVVQTLETVLAESNAEQQQRLFIMLAQMSVVQDDLAK 279

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEI---ANI 298
             +      +LK       A+I  A +LIS    R+ +  LE + +  N   E+     +
Sbjct: 280 QVNQVAHRAALKY-PQLAEAAI--ADALISAANNRENDA-LEAVQRLANVDKELNYVTTL 335

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              +LS+       R       +K S    V+  +  +     ++A  K    +   P  
Sbjct: 336 ALGVLSQKHPEVFNRFFATTPADKLSNAWRVLEVESLITAKEFERAEQKLSGLLSDTPDS 395

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSA 385
            ++ + A I  A       +L +   A
Sbjct: 396 RLYFMAASIAMAQEQEVQTVLGYLDKA 422


>gi|327540348|gb|EGF26934.1| hypothetical protein RBWH47_03973 [Rhodopirellula baltica WH47]
          Length = 903

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 7/218 (3%)

Query: 165 CRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
              GD   A +   +AL   P      ++   V++   L  E   A   L  + + A   
Sbjct: 106 LTQGDYADALQTYREALQRYPTSIALRYMGLDVLRFNGLHDEVGTAEADLFAQMQRAFAG 165

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQNKKRKAE 280
              R  L+ A         D         + ++    + + A +  A+  I +   + A 
Sbjct: 166 YITRDNLIAAGRFLTGRGEDARKVLEMFYDRVRDRDPDYLDAYLATAELAIRKGDFQVAA 225

Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEM 338
             L++  K+    P++ ++    +  +        + +   IN + + SL  +++ A++ 
Sbjct: 226 NTLQQALKLEEETPDLHHLLAKAMESSDGQAATEQIAIALRINPQHLPSLQWLAERAIDR 285

Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375
              D+A   A   ++I P +   + L+A I        
Sbjct: 286 ERYDEAKDVANQMLQINPHEPSAWALMAVISHLRGEYD 323



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 102/300 (34%), Gaps = 53/300 (17%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---------- 152
           A    +    +    +E    LL  Q  L +  Y  A +     LQ   T          
Sbjct: 79  AAATTAASEVERGVWSERWPRLLI-QCQLTQGDYADALQTYREALQRYPTSIALRYMGLD 137

Query: 153 --REFAVY--------SLYFESCR-------IGDLNSAQRY-------ATKALDIS---- 184
             R   ++         L+ +  R         +L +A R+       A K L++     
Sbjct: 138 VLRFNGLHDEVGTAEADLFAQMQRAFAGYITRDNLIAAGRFLTGRGEDARKVLEMFYDRV 197

Query: 185 ----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               PD      A  +  +   ++  A   L Q  K   E        L+A+++E     
Sbjct: 198 RDRDPDYLDAYLATAELAIRKGDFQVAANTLQQALK--LEEETPDLHHLLAKAME---SS 252

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299
           D  A+      +L++    + +    A+  I + +  +A+ +  ++ ++NPH P    + 
Sbjct: 253 DGQAATEQIAIALRINPQHLPSLQWLAERAIDRERYDEAKDVANQMLQINPHEPSAWALM 312

Query: 300 T---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               HL  E  V KL RA  L    +++     ++ +   E     +  A   LA+   P
Sbjct: 313 AVISHLRGEYDVEKLMRAAALSTW-EQNPNVDHLIGRKLSEKYRFAEGAAYQNLALDADP 371


>gi|224121752|ref|XP_002330644.1| predicted protein [Populus trichocarpa]
 gi|222872248|gb|EEF09379.1| predicted protein [Populus trichocarpa]
          Length = 686

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 60/157 (38%), Gaps = 13/157 (8%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  ++   G+   A ++   A  + P    + + +   +V   + +RA   L++     
Sbjct: 184 GLVHKAL--GNTEKAMKFYRIAAFLRPKDSSLWKLLFSWHVEQGDIARAWKCLSKAISAD 241

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +       L    +L   + GD   +     + +++C   + A   AAK  ++  + ++
Sbjct: 242 PD----DISLRSLHALFYDELGDHQRAAESYEQIVRICPEDVEAIKTAAKMHLNCGQIKR 297

Query: 279 AEVILEKIWKVNPHPE-------IANIYTHLLSENTV 308
              ILE   K +P          +A+++  + + N  
Sbjct: 298 CVGILEDYLKGHPSEADLSVIILLADVFMEIDAHNNA 334


>gi|15833664|ref|NP_312437.1| oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai]
 gi|217324905|ref|ZP_03440989.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           TW14588]
 gi|12518248|gb|AAG58671.1|AE005579_1 putative oxidoreductase subunit [Escherichia coli O157:H7 str.
           EDL933]
 gi|13363884|dbj|BAB37833.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str.
           Sakai]
 gi|217321126|gb|EEC29550.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           TW14588]
          Length = 1002

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 197 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 254

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 255 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 314

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 315 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 374

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 375 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 431

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 432 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 485

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 486 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 537



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 429 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 488

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 489 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 548

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 549 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 583



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 102 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 156

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 157 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 216

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 217 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 260


>gi|224111978|ref|XP_002316041.1| predicted protein [Populus trichocarpa]
 gi|222865081|gb|EEF02212.1| predicted protein [Populus trichocarpa]
          Length = 546

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 18/267 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            N+  AR++ +   +     NEY+     LLE +      +Y  A        +      
Sbjct: 189 GNVKKARQLLAKGLK-FCGGNEYVYQTLALLEAKA----NRYKQAQYLFRQATKCNPKSC 243

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +  +      +  +   A++   KA+  SP   +                +A   L   
Sbjct: 244 ASWLAWAQLETQQENNLVARKLFEKAVQASPKNRFAWHVWGVFEANIGNIEKARKLLT-- 301

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                  N   A+LL + +L          +     ++ +L        I        + 
Sbjct: 302 --IGHALNPRDAVLLQSLALLEYRHSTANLARVLFRKASELDPRHQPVWIAWGWMEWKEG 359

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328
               A  + +K   +N   E A          E   G L  A RL      IN +S  + 
Sbjct: 360 NISTARELYQKALSINTTTESAARCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTW 419

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +  +++  + G+  +A     L  +  
Sbjct: 420 MTWAQLEDDQGNSVRAEEIRNLYFQQR 446



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 77/235 (32%), Gaps = 14/235 (5%)

Query: 170 LNSAQRYATK---ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             +A+    K   A        W   AV++  +      RA    +         ++   
Sbjct: 122 TEAARAVYEKGCQATQGENPYVWQCWAVLENKM--GNIRRARELFDAA----TVADKRHV 175

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                 ++    +G++  +     + LK C  +       A      N+ ++A+ +  + 
Sbjct: 176 AAWHGWAILELKQGNVKKARQLLAKGLKFCGGNEYVYQTLALLEAKANRYKQAQYLFRQA 235

Query: 287 WKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            K NP      +A        EN +   K   +  + + ++  +  +       +G+I++
Sbjct: 236 TKCNPKSCASWLAWAQLETQQENNLVARKLFEKAVQASPKNRFAWHVWGVFEANIGNIEK 295

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA--LHAMPDPLWIS 396
           A     +   + PR  + L    + +      +      + A  L     P+WI+
Sbjct: 296 ARKLLTIGHALNPRDAVLLQSLALLEYRHSTANLARVLFRKASELDPRHQPVWIA 350



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 69/227 (30%), Gaps = 7/227 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A E  +           A +       + G++  A++   K L       +V + 
Sbjct: 155 GNIRRARELFDAATVADKRHVAAWHGWAILELKQGNVKKARQLLAKGLKFCGGNEYVYQT 214

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +      A  + +A     Q  K      ++ A  L    LE   + +++ +     +++
Sbjct: 215 LALLEAKANRYKQAQYLFRQATKCNP---KSCASWLAWAQLETQQENNLV-ARKLFEKAV 270

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLLSENTVGKLK 312
           +    +  A         +     KA  +L     +NP    +      L   ++   L 
Sbjct: 271 QASPKNRFAWHVWGVFEANIGNIEKARKLLTIGHALNPRDAVLLQSLALLEYRHSTANLA 330

Query: 313 R--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           R    +  E++       +    +  + G+I  A      A+ I   
Sbjct: 331 RVLFRKASELDPRHQPVWIAWGWMEWKEGNISTARELYQKALSINTT 377


>gi|167519060|ref|XP_001743870.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777832|gb|EDQ91448.1| predicted protein [Monosiga brevicollis MX1]
          Length = 927

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 101/319 (31%), Gaps = 68/319 (21%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQI-PATREFAVYSL 160
           AR +++     +   +E     LE      E        E L+  ++  P      +   
Sbjct: 544 ARAVYAQALAVYKVDDE---LWLEAAFFEKEHGTRVSLEEHLQAAVRHCPQAEVLWLMG- 599

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +   GD+ ++++    A + +P +  +  A ++      E+ RA   L + +  A  
Sbjct: 600 AKSAWNHGDVGTSRQILAAAFEANPGSEEIWLAAIKLESENNEYMRARKLLERARAKAGT 659

Query: 221 WNRNRAILLIA-------RSLENADKG----------------------DMIASYHDAIE 251
                    +        ++L   D                        D+ A+     E
Sbjct: 660 ARVWMKSARLEWVLDDIPQALSLLDGAIQRFPDYFKYYLMKGQIYEQCKDIEAARQAFAE 719

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----------------- 294
            LK     +    CAA+  +SQ    +A  +LE+    NP  +                 
Sbjct: 720 GLKATPKDVEVWRCAAELEVSQGNFTRARALLERGRTYNPKSDLLWLDSVRVERRAGNPQ 779

Query: 295 -----IANIYTH------LLSENTVGKLK---RALRLEEINK--ESVESLVIVSKIALEM 338
                +A           L +E+   + K   R   L+   K   S E LV ++K+ L  
Sbjct: 780 AAETVLAKAMQDVPLSGKLWAESIAMQPKAGRRTKSLDASKKCGNSPEVLVALAKMFLSD 839

Query: 339 GSIDQAHAKAMLAMKIAPR 357
             I +A      A+K+ P 
Sbjct: 840 RKIAKARRWLNSAVKLDPD 858


>gi|115926273|ref|XP_001195612.1| PREDICTED: similar to Tetratricopeptide repeat protein 13 (TPR
           repeat protein 13) [Strongylocentrotus purpuratus]
 gi|115933272|ref|XP_787775.2| PREDICTED: similar to Tetratricopeptide repeat protein 13 (TPR
           repeat protein 13) [Strongylocentrotus purpuratus]
          Length = 940

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 72/221 (32%), Gaps = 33/221 (14%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEA-VVQQYVLA----KEWSRAI 208
            +      +  I D        T+A+++ P  P  W   A V            + S+AI
Sbjct: 254 GMQHPLNAALAIQD-------FTRAIELDPRNPIGWEKRAEVFSTQGRNREAYGDISKAI 306

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                         R  A L   R      +   +A+  D +ES+K     +      A 
Sbjct: 307 DL------------RPTAKLYKYRGYMMFKEEKYVAATKDLMESVKEDKTQVDVMHLLAI 354

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKE 323
           SL  Q K  ++  I +K  ++ P        +A  Y  L   +    L    +    +  
Sbjct: 355 SLYHQGKLHESIRIFKKALEIKPDYVDVLRSLARAYREL--GDYENSLDSFNKALHYSPH 412

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            V+S+ +   +    G   +A +     + + P  E+   +
Sbjct: 413 HVQSIQLRGSLHYHTGKPREALSDFQFCLGLDPTNEVCRYM 453


>gi|307824180|ref|ZP_07654407.1| Sel1 domain protein repeat-containing protein [Methylobacter
           tundripaludum SV96]
 gi|307734964|gb|EFO05814.1| Sel1 domain protein repeat-containing protein [Methylobacter
           tundripaludum SV96]
          Length = 779

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 64/219 (29%), Gaps = 25/219 (11%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQYVLAKEWSRAIT 209
                L        DL   Q    + L + P        W           A+EW     
Sbjct: 321 LGSRLLKRRKLSSEDLERFQSMIERGLSLEPMDSFIWMLWAEYLDHSGQCEAQEW----- 375

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +  +   +   +R  + +AR L    +     +     E+ +   +   + +  A+ 
Sbjct: 376 VLRETARLFPDHEASR--VELARLLIRQGEVKYPEAERWLREAAERNPDREPSRVELARL 433

Query: 270 LISQNKKRK--AEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEI 320
           LI Q + +   AE  L ++   + HP+       +A +             +      E 
Sbjct: 434 LIRQGEAKYPEAERWLLEV--ADRHPDNEQSRVELARLLIRQGEAKYPEAERWLREAVER 491

Query: 321 NKESVESLVIVSKIALEMGS--IDQAHAKAMLAMKIAPR 357
                 S V ++++ +  G     +A           P 
Sbjct: 492 KSNDAPSRVELARLLIRQGEAKYPEAERWLREVADRHPD 530



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 81/226 (35%), Gaps = 15/226 (6%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE--WSRAITFLNQKKKNAKEWNRN 224
            G   + +    +   + PD       + +  +   E  +  A  +L +  +   +   +
Sbjct: 367 SGQCEAQEWVLRETARLFPDHEASRVELARLLIRQGEVKYPEAERWLREAAERNPDREPS 426

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK--AEVI 282
           R  + +AR L    +     +    +E      ++  + +  A+ LI Q + +   AE  
Sbjct: 427 R--VELARLLIRQGEAKYPEAERWLLEVADRHPDNEQSRVELARLLIRQGEAKYPEAERW 484

Query: 283 LEKIW--KVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L +    K N  P   E+A +             +    + + + ++ +S V+++K+  +
Sbjct: 485 LREAVERKSNDAPSRVELARLLIRQGEAKYPEAERWLREVADRHPDNEQSRVVLAKLLFK 544

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
                +A       +K  P+     +L QI+     NT  +  W  
Sbjct: 545 QNKTPEAENLLTEFLKDYPKNSAKNILTQIKD----NTLDVSAWLD 586


>gi|15804991|ref|NP_290110.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 EDL933]
          Length = 1154

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 349 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 406

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 407 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 466

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 467 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 526

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 527 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 583

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 584 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 637

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 638 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 689



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 581 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 640

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 641 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 700

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 701 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 735



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 254 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 308

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 309 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 368

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 369 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 412


>gi|294624942|ref|ZP_06703595.1| cellulose synthase subunit C [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600742|gb|EFF44826.1| cellulose synthase subunit C [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 1203

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 5/164 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L + + A A      A + +E  +Q+          L       GD  +A+    KAL 
Sbjct: 53  QLQQAEAARARGDLAQARQLIEQAVQLLPNEPAGHVGLGDL-QAAGDPVAAEASYRKALS 111

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----ARSLENAD 238
              D     + +V  Y        A    ++     +  +  +A+L      AR+ +  D
Sbjct: 112 READNAGALQGLVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARARQLLD 171

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            GD +++  +   ++          +  A+      +  +A  +
Sbjct: 172 AGDAVSAQTELEAAMVERPGDAWIRLDLARLYQQAGRPDQARSV 215


>gi|20092504|ref|NP_618579.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
 gi|19917772|gb|AAM07059.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1004

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 84/270 (31%), Gaps = 13/270 (4%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL          A +     ++  +     L  L      +   +Y  A +  E   ++
Sbjct: 460 RGLAFAELGEYKEALQAFDRAARYSSGDVYPLACL--GITLICLGEYEEALQVFEQAEEL 517

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                +A            +  +   +   A +  P    +  A          +  ++ 
Sbjct: 518 ----FYASVGAEKTGEPGEEREAEMSWTLDAAEKKPVLERLRTAKGFALDALGRYEASLE 573

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                +K +        I    + L      +   +       L        A++  A +
Sbjct: 574 AFESARKLSGNGK----IACSGKGLVFVHCEEWKKALEAFDTVLIFDPKDTPAAVMKAFA 629

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVE 326
           LI   +  KA  +LE++   +  P++++    +      +    LK   +  E N +++ 
Sbjct: 630 LIRFQEFGKAIEVLERVTAEDKCPDLSSCLLGFACARQGDFDRALKAYRKAIEANPKNIH 689

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +   +++I   +G+   A  +   ++  AP
Sbjct: 690 ARNGLAEIYFRLGNSRGALKELEASIAEAP 719



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 25/138 (18%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R GD + A +   KA++ +P        + + Y        A+  L      A E   +R
Sbjct: 666 RQGDFDRALKAYRKAIEANPKNIHARNGLAEIYFRLGNSRGALKELEASIAEAPENAFSR 725

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-----------ASICAAKSLISQN 274
            +    +     ++     +Y DA+ES  L                 A    A++    N
Sbjct: 726 NL----KGRVELEE----QAYEDALESFGLALALDPEDQRLLLWDTYARYMYAEASFEGN 777

Query: 275 KKR------KAEVILEKI 286
             R       A   LEK 
Sbjct: 778 NARFRHMLLAAAGKLEKA 795



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 72/256 (28%), Gaps = 39/256 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A +  E  L +  +   A          +G    A + + KAL + P +    E 
Sbjct: 147 GKSAEALKAFEETLALEPSHAGAWEGKAKAYLSLGRKREALKASEKALKLKPSSAEAWET 206

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +      +   A+    +            A  ++ +       G    +      SL
Sbjct: 207 QGKIMESIGKKEEALGAFERSL----VLEPMNAGNVMEKGKLLGSLGRYEEALEAFESSL 262

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
            +  +   A I   K+L++    ++A                               L  
Sbjct: 263 WMDSSLSEAKIKRGKTLLALGNFQQA-------------------------------LDS 291

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--N 371
             +  E + E+ E+        L  G   +A      A+ I P      +++ I +    
Sbjct: 292 FRKNLEEDPENFENWGGTGSCFLAFGKYYEAMKAYEKALSIEPENS--CIMSGIGEIYYQ 349

Query: 372 SHNTDKILYWTQSALH 387
             +  + L   + AL 
Sbjct: 350 LGDYSRALEAFEQALR 365


>gi|238920241|ref|YP_002933756.1| tetratricopeptide repeat protein [Edwardsiella ictaluri 93-146]
 gi|238869810|gb|ACR69521.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 389

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 81/270 (30%), Gaps = 39/270 (14%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+   ++ +D +    +
Sbjct: 83  GEVDRAIRIHQSLMESASLSFEQRLLAVQQLGRDYMAAGLYDRAEEMFSQLIDEADFKVF 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W +AI    +  +  K+  R+  A      +L+     D+  +   
Sbjct: 143 ALQQLLLIHQATSDWHKAIDVAEKLVRLGKDQQRSEIAHFYCELALQAMGSDDLDRAQSL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE--KIWKVNPHPEIANIYTHL 302
             ++          S+   +   +  +  KA      +LE  K +     P +   Y   
Sbjct: 203 LKKATAADKGCARVSMMRGRVFQALGEPAKAVTAFSLVLEQDKAFVSEVLPLMEACY--- 259

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351
                         LE+           V     +   L +G + +A      A      
Sbjct: 260 ------------QVLEQPAPWHDFLRRCVDEDAGASAELMLGQVIEAQEGLEAAQVYVSR 307

Query: 352 -MKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            ++  P    F  L   + A      +   
Sbjct: 308 QLQRHPTMRAFHRLIDYQLAE-AEDGRARE 336


>gi|226506424|ref|NP_001147573.1| calcium ion binding protein [Zea mays]
 gi|195612268|gb|ACG27964.1| calcium ion binding protein [Zea mays]
          Length = 840

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 11/222 (4%)

Query: 173 AQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           A     +A ++ P            +      A+     +  L   +    +       +
Sbjct: 285 ALASFRRACELQPTDVRPHFRAGNCLYALGRHAEAKEEYLLALEAAEAGGSQSADILPQI 344

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW- 287
            +   +    +G ++ +     E+  LC +   A      +L    + R AE  LE+   
Sbjct: 345 HVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIF 404

Query: 288 ----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                 + H ++ +   H + E+    ++      ++    V++L  +  + ++ G   +
Sbjct: 405 LKEDYADAHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           A       + I P      L   +       +++     + A
Sbjct: 463 AAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKDA 504



 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 37/203 (18%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +  E+   G +  A  +  +A  + P      + +        E+  A   L +     
Sbjct: 349 GIAMEA--EGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLK 406

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +++    A   +  +L     G+   +  +   ++ L    + A        +   +  +
Sbjct: 407 EDY--ADAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A                A +YT +L                I      + +  +   L  
Sbjct: 463 A----------------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQ 491

Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361
           G  ++A      A K+  R E++
Sbjct: 492 GESEEAKKALKDAFKMTQRVEVY 514


>gi|53804387|ref|YP_113968.1| TPR domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53758148|gb|AAU92439.1| TPR domain protein [Methylococcus capsulatus str. Bath]
          Length = 550

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 66/251 (26%), Gaps = 54/251 (21%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-------------------- 133
           ++ A ++ LA +            +  L  L   +I LA+                    
Sbjct: 29  ALTAGDLALAERCCR--KALELQPDAALTRLHLARIRLAQRRLAEASECLERAEHSPGLD 86

Query: 134 --------------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
                              A      +L       +A  +L     R GDL  A     +
Sbjct: 87  AKTLNRIGIVWLDLDDCARAETCFRSVLARDDAHAYAWCNLGIALQRKGDLGDALTCFRR 146

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL++ PD                  + A+  L +       +    A+      +   D 
Sbjct: 147 ALELKPDFAEAMHNCGLLLRDLGRPAEALEILERALSLKPGF----ALAQTNIGVVLQDF 202

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G    +     ++L++        +  A  L+S  + R+        W+          Y
Sbjct: 203 GKFDDAIAAFDQALEMEPQCGDIHLTKAHLLLSVGRFREG-------WEEQ-------EY 248

Query: 300 THLLSENTVGK 310
             L  E    +
Sbjct: 249 RRLAPEFPRDR 259



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 30/166 (18%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNA 218
           ++   GDL  A+R   KAL++ PDA      + +  +  +  + A   L + +     +A
Sbjct: 28  QALTAGDLALAERCCRKALELQPDAALTRLHLARIRLAQRRLAEASECLERAEHSPGLDA 87

Query: 219 KEWNR--------------------------NRAILLIARSLENADKGDMIASYHDAIES 252
           K  NR                            A       +    KGD+  +      +
Sbjct: 88  KTLNRIGIVWLDLDDCARAETCFRSVLARDDAHAYAWCNLGIALQRKGDLGDALTCFRRA 147

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           L+L  +   A       L    +  +A  ILE+   + P   +A  
Sbjct: 148 LELKPDFAEAMHNCGLLLRDLGRPAEALEILERALSLKPGFALAQT 193


>gi|313216894|emb|CBY38113.1| unnamed protein product [Oikopleura dioica]
          Length = 398

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 74/202 (36%), Gaps = 7/202 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  +  +Q  +T   A  +L     + GD+  A     KA+ +          
Sbjct: 185 GRLEEAEECYQKAIQCNSTFAVAYSNLGCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFIN 244

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +  A+ + RA++   +        N   A++    +    ++G +  +      ++
Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310
           +L  N   A    A +L  +    +AE   E+  K++P H +  N   ++  E   T   
Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360

Query: 311 LKRALRLEEINKESVESLVIVS 332
           ++   R  +   +   +   ++
Sbjct: 361 MELYQRALKAKPDFPAAHSNLA 382


>gi|224028305|gb|ACN33228.1| unknown [Zea mays]
          Length = 840

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 11/222 (4%)

Query: 173 AQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           A     +A ++ P            +      A+     +  L   +    +       +
Sbjct: 285 ALASFRRACELQPTDVRPHFRAGNCLYALGRHAEAKEEYLLALEAAEAGGSQSADILPQI 344

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW- 287
            +   +    +G ++ +     E+  LC +   A      +L    + R AE  LE+   
Sbjct: 345 HVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIF 404

Query: 288 ----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                 + H ++ +   H + E+    ++      ++    V++L  +  + ++ G   +
Sbjct: 405 LKEDYADAHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           A       + I P      L   +       +++     + A
Sbjct: 463 AAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKDA 504



 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 37/203 (18%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +  E+   G +  A  +  +A  + P      + +        E+  A   L +     
Sbjct: 349 GIAMEA--EGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLK 406

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +++    A   +  +L     G+   +  +   ++ L    + A        +   +  +
Sbjct: 407 EDY--ADAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A                A +YT +L                I      + +  +   L  
Sbjct: 463 A----------------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQ 491

Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361
           G  ++A      A K+  R E++
Sbjct: 492 GESEEAKKALKDAFKMTQRVEVY 514


>gi|114683095|ref|XP_001151987.1| PREDICTED: PRP6 pre-mRNA processing factor 6 homolog isoform 2 [Pan
           troglodytes]
          Length = 809

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 447 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 504

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 505 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 564

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 565 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 624

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 625 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 682

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 683 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 740

Query: 391 D 391
           D
Sbjct: 741 D 741



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 156 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 212

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 213 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 264

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 265 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 317

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 318 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 363


>gi|54294309|ref|YP_126724.1| hypothetical protein lpl1374 [Legionella pneumophila str. Lens]
 gi|53754141|emb|CAH15614.1| hypothetical protein lpl1374 [Legionella pneumophila str. Lens]
 gi|307610126|emb|CBW99672.1| hypothetical protein LPW_14401 [Legionella pneumophila 130b]
          Length = 389

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 67/204 (32%), Gaps = 45/204 (22%)

Query: 93  MSIAA-----HNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKL 143
           +++ +       +  A ++H  +  +         E L+ L   Q  ++   ++ A    
Sbjct: 73  LALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMAL--GQDYMSAGVFDRAERIF 130

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +++                   G   ++                  + ++  Y   K 
Sbjct: 131 LEVVE------LG-----------GSRETS----------------SLQGLLAIYQQEKA 157

Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           W +A+  + + +      ++   A      + +      M  + +   +++ +   S+ A
Sbjct: 158 WEKALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRA 217

Query: 263 SICAAKSLISQNKKRKAEVILEKI 286
           S+  A   I + + ++A   L+++
Sbjct: 218 SLMNATIEIKEGRYKQAIRSLKRV 241


>gi|281180568|dbj|BAI56898.1| putative cellulose synthase [Escherichia coli SE15]
          Length = 1157

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEALL----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEALLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD + +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPMQALETYKDAM 738



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|302841825|ref|XP_002952457.1| hypothetical protein VOLCADRAFT_62457 [Volvox carteri f.
           nagariensis]
 gi|300262393|gb|EFJ46600.1| hypothetical protein VOLCADRAFT_62457 [Volvox carteri f.
           nagariensis]
          Length = 914

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 48/310 (15%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +          L      L       A    + + +IP     +V  L+  +  
Sbjct: 370 AKALLARGVAQLPESTKLWMAAAKLETDDTAKARVLRKALERIP----TSVR-LWKAAVE 424

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           + + + A+   ++A++  P A  +  A+ +       +  A   LN  +K          
Sbjct: 425 LAEEDDARILLSRAVECCPQAVELWLALARLET----YENARKVLNNARKAVPTEPAIWI 480

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                     A++G +      AI+SL     S    +    + + +          E  
Sbjct: 481 TAAKLEEANGAEQGQVDKIVARAIKSL-----STNGVVIHRDAWMKEA---------ENA 526

Query: 287 WKVNPHP-----------------EIANIYTHLLS--ENTVGK--LKRALRLEEINKESV 325
            +  P P                 + A++   L++  E+   +  ++ A  L      + 
Sbjct: 527 ERSTPAPHVLTCRAIVRTVYSLGVDAADLEATLVADAEDAAKRGSVETARALYSQALTTF 586

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQANSHNTDKILYW 381
            S   + + A ++     + A+    ++ A    P+ E+  L+A  E     + D     
Sbjct: 587 PSQPHIWRQAAQLEKGHGSRAQLDELLRRAVQFCPQAEVLWLMAAKEAWLGGDVDGSRAI 646

Query: 382 TQSALHAMPD 391
              A  A PD
Sbjct: 647 LARAFAANPD 656



 Score = 43.4 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 84/226 (37%), Gaps = 27/226 (11%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A+      +  +P     W+  A +++  +A + + A   +    +  +    +  
Sbjct: 302 DIKKARHLLKSVIQTNPRHAPGWIAAARLEE--VAGKLADARKLI---MQGCELCPNSED 356

Query: 227 ILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           I L A  L+  D    + +   A   ES KL          AA  L   +   KA  +L 
Sbjct: 357 IWLEAARLQTPDNAKALLARGVAQLPESTKL--------WMAAAKL-ETDDTAKA-RVLR 406

Query: 285 KIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           K  +  P    +      L  E+    L    R  E   ++VE  + ++++     + + 
Sbjct: 407 KALERIPTSVRLWKAAVELAEEDDARIL--LSRAVECCPQAVELWLALARL----ETYEN 460

Query: 344 AHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           A      A K  P +  I++  A++E+AN     ++      A+ +
Sbjct: 461 ARKVLNNARKAVPTEPAIWITAAKLEEANGAEQGQVDKIVARAIKS 506


>gi|221638180|ref|YP_002524442.1| hypothetical protein RSKD131_0081 [Rhodobacter sphaeroides KD131]
 gi|332560205|ref|ZP_08414527.1| TPR repeat-containing protein precursor [Rhodobacter sphaeroides
           WS8N]
 gi|221158961|gb|ACL99940.1| TPR repeat-containing protein precursor [Rhodobacter sphaeroides
           KD131]
 gi|332277917|gb|EGJ23232.1| TPR repeat-containing protein precursor [Rhodobacter sphaeroides
           WS8N]
          Length = 566

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 7/238 (2%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L    +  +     +    +  H   +     LL  QI   + Q+ +A E    +     
Sbjct: 262 LAGALSGEVDDGSTLLYARTATHLRPDHTEALLLSAQILDNQGQHQLASETYARIPTADP 321

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A           G + ++           P+   V  A+       + ++ A+   
Sbjct: 322 MFFVAEIGRADALRADGKIEASLEVLQGLARSKPELMQVHLALGDALRREERYADAVKAY 381

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +          R    L  +R + +        +  D   +L+L  +          S +
Sbjct: 382 DAAIARVPAPERQHWPLFYSRGICHERLSHWKEAEADFRRALELNPDEPQVLNYLGYSFV 441

Query: 272 SQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTVGKLKRALRLEEINK 322
            +     +A  ++E+     P        +A  Y  L   ++ V  +++A  LE ++ 
Sbjct: 442 DRGQNLEEALSMIERAVAARPESGYIIDSLAWAYFRLGRYQDAVEPMEKASLLEPVDP 499


>gi|95929293|ref|ZP_01312037.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134791|gb|EAT16446.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 576

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 82/206 (39%), Gaps = 12/206 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +         ++  A  + +++  +   AI  L +       ++     L    +  + 
Sbjct: 45  EEQQRYQRAQAYLAYADARLHLIDGDVDAAIEALQRAV----TFDDQSPYLFAVLASIHL 100

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           D+G    +     ++L L  + + + +  A    +Q K  +A     ++  ++ HP+I +
Sbjct: 101 DRGQTQQAQDYLNQALVLEPHHLASELMLADVYHAQGKTDQAIQAFRQV--LDRHPDIED 158

Query: 298 IYTHL-LSENTVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +Y H+     ++    +A ++     +   +SV+ L+ ++ +    G   QA      A+
Sbjct: 159 VYLHISRLYLSLQAYDKAEQILLQWLKRQPQSVDGLMELANLYRLRGDYQQAITTYRQAI 218

Query: 353 KIAP-RKEIFLLLAQIEQANSHNTDK 377
           ++ P  + I+L L ++ +      + 
Sbjct: 219 ELTPHDRRIYLPLGRLLEQQRQFDEA 244



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 47/373 (12%), Positives = 109/373 (29%), Gaps = 72/373 (19%)

Query: 40  SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAH 98
           S +  +   +F + + +LL   +      P+ L     +R    + Y A     + +   
Sbjct: 10  SFWRFVPGRFFLIGSLLLLMMTACSLPPKPSPLSVEEQQRYQRAQAYLAYADARLHLIDG 69

Query: 99  NIPLARKMHSYV--------------------------------SQQHTFHNEYLVYLLE 126
           ++  A +                                            +     L+ 
Sbjct: 70  DVDAAIEALQRAVTFDDQSPYLFAVLASIHLDRGQTQQAQDYLNQALVLEPHHLASELML 129

Query: 127 VQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             +  A+ + + A +    +L   P   +  +  +      +   + A++   + L   P
Sbjct: 130 ADVYHAQGKTDQAIQAFRQVLDRHPDIEDVYL-HISRLYLSLQAYDKAEQILLQWLKRQP 188

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            +      +   Y L  ++ +AIT   Q  +     +  R  L + R LE   + D   +
Sbjct: 189 QSVDGLMELANLYRLRGDYQQAITTYRQAIE--LTPHDRRIYLPLGRLLEQQRQFD--EA 244

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                E+ +  ++        +  LI Q +  +A                          
Sbjct: 245 LTLYDEAARQTEDQAYFDHLGSTLLIEQGRYSEA-------------------------- 278

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLL 363
                L+R   + + +   VE+L  +  I +E+    +A +    A+   P   +  + L
Sbjct: 279 -----LQRVESIVQHDPADVEALGKLGYIYIELERWSEAESMFRQALPYHPVSSQLFYWL 333

Query: 364 LAQIEQANSHNTD 376
              +E        
Sbjct: 334 AFALEHQQRWEEA 346



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 40/126 (31%), Gaps = 6/126 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE-WSRAITFLNQKKKNAKEWNRNR 225
            G  +  ++   + L ++P        +   Y  + E    A+    +  + A       
Sbjct: 442 RGLRDRTEQLMRETLTLNPQHVGALNHLAYIYAESGEHLDEALEMARKAAQLAPHAAVLD 501

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +  +   L     GD   +     +++K     ++     A         ++A+ I  K
Sbjct: 502 TLGWVYYQL-----GDYEQAREPLEQAVKKSPEDVLILEHLADLYRKLLLTQEAQRIYRK 556

Query: 286 IWKVNP 291
             ++ P
Sbjct: 557 ALELQP 562


>gi|88602287|ref|YP_502465.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
 gi|88187749|gb|ABD40746.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 634

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 77/243 (31%), Gaps = 18/243 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             L       A E     +++    +R +    +      +G    A     KA++++P+
Sbjct: 144 AQLLNTDSESALESFNKAIELMPDGSRAYYWKGITL--SDLGQPEEALTAYEKAIELNPE 201

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-------- 238
                 A         ++  A    NQ      +++     L +    +  D        
Sbjct: 202 FKDALYAKGIAESALGKFDEAEATFNQVLTIEGDYS--EPFLTVGSDSDVWDRKGRILFE 259

Query: 239 -KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            + +   +     ++++L   +  A     + L  Q     A        + +P   +A+
Sbjct: 260 VRNNPDEALTAFNKAVELNPYNANALYYKGRVLYDQGDLTGAMEAFTAASEADPQMGVAH 319

Query: 298 IY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            +    ++   +  G +       E+N    ++   +  +  + GS D+A       +++
Sbjct: 320 YWKGQVYIDQSDRSGAIAEFRTATELNPNLADAWYYLGGLLSDEGSYDEATTALDKMIEL 379

Query: 355 APR 357
            P 
Sbjct: 380 RPD 382



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 19/279 (6%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + ++   +     A E      +       A Y          D + A      A +++P
Sbjct: 288 KGRVLYDQGDLTGAMEAFTAASEADPQMGVAHYWKGQVYIDQSDRSGAIAEFRTATELNP 347

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIA 244
           +       +         +  A T L++  +   +  +      L    LEN        
Sbjct: 348 NLADAWYYLGGLLSDEGSYDEATTALDKMIELRPDLADPYYLKGLTQYQLENYQDAADSL 407

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNPHPEIA-NIYTHL 302
               A+ + ++ ++    +         QN+  + A     K  ++N    +A N Y  +
Sbjct: 408 EQATALNASQMTEDDRSKAYYTLGLARVQNEDNQGASEAFAKAVELNATNAVAWNDYGVV 467

Query: 303 LS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           L+  EN    LK      +I+    E         +++  +D+A A    A+ I P    
Sbjct: 468 LNELENYEEALKAFNEAIKISDSEAEYYYNQGTTLVKLDKLDEAIAAFDKAVAIEPSPRA 527

Query: 361 FLL--LAQI-----EQANSH-------NTDKILYWTQSA 385
           +L   LA I     E+A          +  K   W Q A
Sbjct: 528 YLAKGLALITQENFEEALKAFESAIALDDTKADLWAQKA 566


>gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120]
 gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120]
          Length = 280

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 50/160 (31%), Gaps = 8/160 (5%)

Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                     A     E +   P     F        S   GD   A     +A+ +SP+
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASL--GDNAGAITDYNEAIRLSPN 159

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                        +  +   A+   NQ  +   ++    AI    R    A +GD   + 
Sbjct: 160 YAEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKY----AIAYNNRGNARASQGDRQGAI 215

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            D  ++++L  N   A      +  +Q  ++ A   L+K 
Sbjct: 216 SDYNQAIRLNSNFGPAYNNRGNARAAQGDRQGALEDLQKA 255


>gi|313680559|ref|YP_004058298.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313153274|gb|ADR37125.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 500

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 98/281 (34%), Gaps = 10/281 (3%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAE-RQYN 137
           N D+G+ A  + L  I        R +           +  +   LL  +  + +    +
Sbjct: 213 NRDRGHVAAVSLLADIFVGQGLTDRALRELDRSLQAVDDPAVRANLLLKKAMVLKPTDPD 272

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A + L+   ++ +    A Y L     R GD + A     KA  + PD P +   +   
Sbjct: 273 RASQLLQEATRLDSRLWQAHYDLGTHWLRAGDADRALVAFQKAYSVKPDEPRILVGLAAA 332

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y   K++ +A  +       A+   R  A+L+  +S      G    +    ++++ L  
Sbjct: 333 YFQKKDYKQASRYAKLAAAAAQGDVRADALLVAGKSAYRL--GRYGEARALLLQAVDLVP 390

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKR 313
           +   A +    +  +      A   LE+  +++P P     +   Y      +   ++  
Sbjct: 391 DRAEAWLWLGLAAYALQDLDTAVPALERAVQLDPSPVARLNLGAAYLASKRFSDAEQV-- 448

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++   +  + E+   +      +    +A      A+++
Sbjct: 449 LTQVVLEDPNNAEAWYNLGWALKALARESEAQRAWKRALEL 489



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 7/232 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G    A  Y  K L+           +   +V      RA+  L++  +   +    RA
Sbjct: 198 AGKPKEAIPYLYKVLNRDRGHVAAVSLLADIFVGQGLTDRALRELDRSLQAVDDPAV-RA 256

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            LL+ +++      D   +     E+ +L      A        +      +A V  +K 
Sbjct: 257 NLLLKKAM-VLKPTDPDRASQLLQEATRLDSRLWQAHYDLGTHWLRAGDADRALVAFQKA 315

Query: 287 WKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           + V P  P     +A  Y          +  +            ++L++  K A  +G  
Sbjct: 316 YSVKPDEPRILVGLAAAYFQKKDYKQASRYAKLAAAAAQGDVRADALLVAGKSAYRLGRY 375

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            +A A  + A+ + P +    L   +      + D  +   + A+   P P+
Sbjct: 376 GEARALLLQAVDLVPDRAEAWLWLGLAAYALQDLDTAVPALERAVQLDPSPV 427


>gi|289207918|ref|YP_003459984.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
           sp. K90mix]
 gi|288943549|gb|ADC71248.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
           sp. K90mix]
          Length = 256

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 39/280 (13%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++      +A +  +    +    N  L         L E + + A   L+  L+    
Sbjct: 16  LALG-GCAAMAEREVTGERAEAAEVNAELGI-----GYLREGEVDQAERNLKRALEFDPG 69

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A   +     R G L+ A+ +  +AL      P+V  ++       + +  A     
Sbjct: 70  HPLANLGMANVYERRGALDRAEEHYRRALRRDDGNPYVQTSLGALLCRREAFDEAQELFA 129

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +   +  +++  R I L+   +  AD G    +     E+L++      A +  A     
Sbjct: 130 RA-IDNPDYD-QREIALMNSGVCFADAGQTERAEEKLREALRINPQYPRALLEMASLTYE 187

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            ++  +    L                                RLE +  ES E+L +  
Sbjct: 188 DDRPMQTRAFL-------------------------------QRLEGLGVESSETLFLCY 216

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           +  L +G+   A+  A    +  P     + L  +E+   
Sbjct: 217 RAELALGNRRAANDCAERLRRQYPDSMELVRLEDMERNGG 256


>gi|298485755|ref|ZP_07003834.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298159781|gb|EFI00823.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 637

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 93/310 (30%), Gaps = 48/310 (15%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAA----HNIPLARKMHSYVSQ---QHTFHNEYLVY--- 123
               K     GY      L + A      +   ARK  +   +         E L     
Sbjct: 88  QRFPKARPKPGYLEGNQALRAYANRDYDGSANHARKAIAQAPKNLDYRMMLIEALQRQQR 147

Query: 124 LLEVQIALAERQY--NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L E Q+A  + Q   + A    +                   +   GD ++A   A +A+
Sbjct: 148 LDEAQLAAIQEQAAVDKAASGYK-------------------ALARGDNDTAVSEAREAV 188

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              P      + +V   +   +++ A +   +        N N A LL+ R       GD
Sbjct: 189 RSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMRQRLGD 244

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANI 298
              +  D  ++  L   ++      A    +  +  KA   L+K        P  E+   
Sbjct: 245 QDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSKALQRLQKARDAGELQPGDEVQIA 301

Query: 299 YTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           Y    + +    + + KR  R   +      ++  S +     A  +    +        
Sbjct: 302 YFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPDDAQAIAYFKRVLDYQKAG 361

Query: 352 MKIAPRKEIF 361
               P +++F
Sbjct: 362 DLQMPAQQVF 371


>gi|194363883|ref|YP_002026493.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3]
 gi|194346687|gb|ACF49810.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3]
          Length = 689

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 57/203 (28%), Gaps = 7/203 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A + A       P        +            A+  L +  + A + 
Sbjct: 6   IQALRQNQADQAVQLAQAWTRDEPGLAEAHRWLALALQQQGNAEHAMDALQEALRLAPD- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + ++           +      +  L  NS  A +  A   I +N   +A  
Sbjct: 65  ---DAQLHLQQAGLLLALRQFEGADEALARTTGLDPNSFSAYLMQAHLAIGRNDFDEAAR 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     +V P HPE+  I     L   +    L       +   +    L  +    L  
Sbjct: 122 VSTLASRVEPDHPELLTIDGMVALRRGDADRALSLLSAASKALPDDPRVLYALGFAYLGK 181

Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361
             +  A       +++ P     
Sbjct: 182 DMLAFAEQSFRRVLELNPSLSSL 204



 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 86/269 (31%), Gaps = 41/269 (15%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQ------------------------------QHTFHNE 119
            G++++   +   A  + S  S+                              +    N 
Sbjct: 140 DGMVALRRGDADRALSLLSAASKALPDDPRVLYALGFAYLGKDMLAFAEQSFRRVLELNP 199

Query: 120 YLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176
            L  L  L VQ+AL +     A E +++ LQ P     A+  L  E S R G    A  Y
Sbjct: 200 SLSSLHGLVVQLALRQGNVPAAAEAMQVALQQPQMDVPAMRRLAGELSLRSGQPLQALEY 259

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
               L+  PD   + + ++  +        A   L+   +N  + +    + L   ++E 
Sbjct: 260 LLPLLETQPDDRQMLQLLLMSWQRLGREDEARARLDAVLENNDQLHD---VWLARLAIEQ 316

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                 + +    + ++      + A     +      +  +AE I E+I    P     
Sbjct: 317 VGSESAVTAVERWMAAM---PEHLPALEARLRLHDMAGEHAQAEAIAERIVSQEPGRVSG 373

Query: 297 NIYT--HLLSENTVGKLKRALRLEEINKE 323
                  LL  +    + R   L ++  E
Sbjct: 374 ETRLVEGLLQRDPAAAVARVQALIDLAPE 402



 Score = 44.2 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL + Q + A +  +   +       A   L     + G+   A     +AL ++PD   
Sbjct: 8   ALRQNQADQAVQLAQAWTRDEPGLAEAHRWLALALQQQGNAEHAMDALQEALRLAPDDAQ 67

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +        +  +++  A   L   +    + N   A L+  ++     + D   +   +
Sbjct: 68  LHLQQAGLLLALRQFEGADEAL--ARTTGLDPNSFSAYLM--QAHLAIGRNDFDEAARVS 123

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSEN 306
             + ++  +            + +    +A  +L    K    +P    A  + +L  + 
Sbjct: 124 TLASRVEPDHPELLTIDGMVALRRGDADRALSLLSAASKALPDDPRVLYALGFAYLGKDM 183

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                +   R+ E+N        +V ++AL  G++  A     +A++ 
Sbjct: 184 LAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVPAAAEAMQVALQQ 231



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 96/293 (32%), Gaps = 14/293 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            N   A  M +         ++  ++L +  + LA RQ+  A E L     +      A 
Sbjct: 46  GNAEHA--MDALQEALRLAPDDAQLHLQQAGLLLALRQFEGADEALARTTGLDPNSFSAY 103

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                 +    D + A R +T A  + PD P +        +   +  RA++ L+   K 
Sbjct: 104 LMQAHLAIGRNDFDEAARVSTLASRVEPDHPELLTIDGMVALRRGDADRALSLLSAASKA 163

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +  R    +L A       K  +  +       L+L  +         +  + Q    
Sbjct: 164 LPDDPR----VLYALGFAYLGKDMLAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVP 219

Query: 278 KAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            A   ++      P  ++           L S   +  L+  L L E   +  + L ++ 
Sbjct: 220 AAAEAMQVA-LQQPQMDVPAMRRLAGELSLRSGQPLQALEYLLPLLETQPDDRQMLQLLL 278

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQ-ANSHNTDKILYWTQ 383
                +G  D+A A+    ++   +   ++L    IEQ  +      +  W  
Sbjct: 279 MSWQRLGREDEARARLDAVLENNDQLHDVWLARLAIEQVGSESAVTAVERWMA 331


>gi|320666656|gb|EFX33639.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 1157

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 21/168 (12%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A + L +++K   +     A    A+ L   D G    +  +  ++++       A  
Sbjct: 252 AAAQSQLTEQQKQLADP----AFRARAQGLAAVDSGMAGKAIPELQQAVRANPKDSEALG 307

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK-- 312
              ++   +  +  A   LEK   ++PH         +  +   +  +   +   K    
Sbjct: 308 ALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNP 367

Query: 313 -RALRL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
            RA RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 368 DRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|229078801|ref|ZP_04211354.1| hypothetical protein bcere0023_14640 [Bacillus cereus Rock4-2]
 gi|228704483|gb|EEL56916.1| hypothetical protein bcere0023_14640 [Bacillus cereus Rock4-2]
          Length = 434

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|28199334|ref|NP_779648.1| hypothetical protein PD1453 [Xylella fastidiosa Temecula1]
 gi|182682059|ref|YP_001830219.1| tetratricopeptide repeat protein [Xylella fastidiosa M23]
 gi|28057440|gb|AAO29297.1| heat shock protein [Xylella fastidiosa Temecula1]
 gi|182632169|gb|ACB92945.1| conserved hypothetical protein [Xylella fastidiosa M23]
          Length = 392

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/389 (12%), Positives = 112/389 (28%), Gaps = 44/389 (11%)

Query: 60  AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107
               F     A L   +  R      G+  +         GL  + +     A ++    
Sbjct: 7   WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 66

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163
           + + ++       L +L   +      + + A    + + + P      + FA+ +L  +
Sbjct: 67  AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 121

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222
             + G L+ A+   T+   I   AP     ++  Y   ++W +AI   +  +    +   
Sbjct: 122 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVVTGEPMG 181

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +  A      +           +      + +    S+ + I   +          A   
Sbjct: 182 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRSGIIEGRIEADLGHHEAAVRA 241

Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333
            E+  + +P       P +   Y  +        +  A        E    +   + +++
Sbjct: 242 WERAARHDPEYLPEIIPSLLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 295

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391
           +        QA       +K  P       L  +  A+  +    LY  +     +   +
Sbjct: 296 LIESQEGPAQARVYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 355

Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417
           P +       G  +  W    P  K    
Sbjct: 356 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 382


>gi|324007316|gb|EGB76535.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|124486270|ref|YP_001030886.1| hypothetical protein Mlab_1454 [Methanocorpusculum labreanum Z]
 gi|124363811|gb|ABN07619.1| Tetratricopeptide TPR_2 repeat protein [Methanocorpusculum
           labreanum Z]
          Length = 240

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 79/238 (33%), Gaps = 13/238 (5%)

Query: 131 LAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           +       A    +  ++  P   +   Y+L     + G+   A      A  + P    
Sbjct: 1   MISGDEKGAIFCYQESVKLRPGIPDV-WYNLARLFEKTGERKEALATHITAGKLFPADYR 59

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
            +    +    + +++ A+   +    +A         LL  ++      G+   +   A
Sbjct: 60  FSAERARLLAESGKYTEAVNAASDALASAPYSP----TLLANKAGYLIFAGNPDEARQTA 115

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLS 304
            ++L +     +A +  A +        KA+  +E        P+            + S
Sbjct: 116 EQALAIDPGCALAYLHKAHAESLLGNAAKAKETMETGLSSV--PDDGRLLKLQANLLIRS 173

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           E+    L    ++  ++    ES  +    +  +G  + A +    AMK+ P+++ + 
Sbjct: 174 EDFEAGLASIEKVLLLDPNDAESWSLKGAASAYLGRKEDAISAFEQAMKLDPKEKAYR 231


>gi|217959096|ref|YP_002337644.1| TPR domain protein [Bacillus cereus AH187]
 gi|217068024|gb|ACJ82274.1| TPR domain protein [Bacillus cereus AH187]
          Length = 420

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +  +    +E ++     ++  ++ +   A    E +L         V      + R
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213
           +G+  SA     +A+          +           +    +       W         
Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +  KE +   A L +  +     +G +  SY    + +K+ + S+   +  A      
Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHKGIKVDELSVPFYVELANIAAKL 284

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  +AE +L+K  +++P H  +     Y ++L E                 E  E L+ 
Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326

Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
           V + A++ G        D A AK  L M        +  + 
Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|94967944|ref|YP_589992.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549994|gb|ABF39918.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 324

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 12/199 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y+ A      M  +      +         R      A+ YA KA+ + P  P     
Sbjct: 131 KNYDQARGAFAQMFDVKRDSAASYLFTARMLLRQEYDPVAEEYAQKAIALEPTLPLAHYL 190

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIES 252
           + + ++       AI    ++      +      L  A S  +  D  + +      +++
Sbjct: 191 LGELHLYKSRVPEAIEDFRKELNLNPSYAPAYYKLADAYSRVQKYDDAERLLQRSIWLDA 250

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307
                      I   K L  + +   A   L+    ++P     H  +   Y  L   + 
Sbjct: 251 TTTGP-----YILLGKVLEKKGEPLLALRALQHAASMDPKNPITHHLLGQSYRDLGKSDD 305

Query: 308 VGK-LKRALRLEEINKESV 325
             + LK A  L+    E+ 
Sbjct: 306 AERELKLAEELQNKQNENR 324



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 91/293 (31%), Gaps = 68/293 (23%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            QY+ A  +L+ + Q  +  E  V  +     + GD  SA RY  +A   +       + 
Sbjct: 28  GQYDEAIVQLQKLQQEQSAIEGLVREIGIAYYKKGDYLSAIRYLKQATKQNEKDSEAVQL 87

Query: 194 VVQQYVLAKEWSRAITFLNQ--------------------------KKKNAK-----EWN 222
           +   Y L+ +   AI  L +                           +         +  
Sbjct: 88  LGLSYYLSGKPQDAIPLLEKVQTWFPSANVDASYILGICYIHLKNYDQARGAFAQMFDVK 147

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           R+ A   +  +     +     +   A +++ L     +A     +  + +++  +A   
Sbjct: 148 RDSAASYLFTARMLLRQEYDPVAEEYAQKAIALEPTLPLAHYLLGELHLYKSRVPEAIED 207

Query: 283 LEKIWKVNP--HPE---IANIYTHLLSENTVGK--------------------------- 310
             K   +NP   P    +A+ Y+ +   +   +                           
Sbjct: 208 FRKELNLNPSYAPAYYKLADAYSRVQKYDDAERLLQRSIWLDATTTGPYILLGKVLEKKG 267

Query: 311 -----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                L+       ++ ++  +  ++ +   ++G  D A  +  LA ++  ++
Sbjct: 268 EPLLALRALQHAASMDPKNPITHHLLGQSYRDLGKSDDAERELKLAEELQNKQ 320


>gi|331670362|ref|ZP_08371201.1| cellulose synthase operon protein C [Escherichia coli TA271]
 gi|331062424|gb|EGI34344.1| cellulose synthase operon protein C [Escherichia coli TA271]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDHDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|114570361|ref|YP_757041.1| hypothetical protein Mmar10_1811 [Maricaulis maris MCS10]
 gi|114340823|gb|ABI66103.1| Tetratricopeptide TPR_2 repeat protein [Maricaulis maris MCS10]
          Length = 596

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 11/264 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    +L           + A                   +L     R G L++A   
Sbjct: 32  PDQPDALMLRAMARSRTGDDSGAVSDFLAAGLCHPQPHAVHNNLGNHHQRAGRLDAAVAA 91

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +AL ++P        +       +++  A T +N     A     N A+LL A     
Sbjct: 92  YREALRLAPGFADARMNLAITLSQGEDFEAARTAINAVLDQAP----NHALLLNALGNVE 147

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291
              G+  A+      ++     ++   I          +   +   L     + P     
Sbjct: 148 RRAGNPDAARRAYDGAIAADPQAVQPRINRGALRRETGEIEASCADLRDACGMAPGLAEA 207

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           H ++A+     L      +  R   L  +  +       ++ +  E G  D+A       
Sbjct: 208 HAQLAHSLRTSLDITGAEQAYR-QALA-LAPDDPGYHADLAGLLAEAGQGDKALTTLQGR 265

Query: 352 MKIAPRKEIFLLLAQIEQANSHNT 375
           + ++    ++ +LA+++  +    
Sbjct: 266 IAVSGDPRLYEVLARLQMRSGRPE 289


>gi|320191422|gb|EFW66072.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC1212]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|258591282|emb|CBE67579.1| putative TPR domain protein [NC10 bacterium 'Dutch sediment']
          Length = 585

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 75/238 (31%), Gaps = 9/238 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A     ++ A    +  LQ+          L     + GD+  A      AL +      
Sbjct: 65  AEQAGDHHAAITWQKAALQVDHRSVVMHNHLASLHMKRGDVRGAINAGEDALALDSKNLH 124

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y         ++   +  +NA + +  R    +  +    +      +    
Sbjct: 125 AHLLLAAVYQSLHN----LSVAERYFRNALDLDPVRTETYVQLAALYREARKAQEAIAVY 180

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            ++L +   S++      +  + + +  +A  I  +I + +   + A     +  E   G
Sbjct: 181 RQALDVDPGSLVIRYNLGRLYLEEGQSEQASHIFREILERDSAFDPALTALGMSLE-AQG 239

Query: 310 KLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           KL  A  + +        + E    ++++ L    +D A  +    +   P    F L
Sbjct: 240 KLDEARTMYQRALVDDPRNGEIRERLAQLLLRQKELDAALIEYRRLLDQEPNNSSFKL 297


>gi|285019856|ref|YP_003377567.1| hypothetical protein XALc_3096 [Xanthomonas albilineans GPE PC73]
 gi|283475074|emb|CBA17573.1| hypothetical protein XALc_3096 [Xanthomonas albilineans]
          Length = 695

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 83/292 (28%), Gaps = 15/292 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  + S          +  ++LL   I +       A   L     +      A   
Sbjct: 46  GDTAGALDSIDRAIALAPEDAELHLLRASILVGANDLPQAEVALAQTAALDPNAFMAYIM 105

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
               +   GDL+  +R +  A  + P+ P +        +   +  RA+  L++      
Sbjct: 106 RGHLALGRGDLDEVERLSRTAARLQPEHPQLLGLDGMLALRRGDADRALALLSRASNALP 165

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMASICAAKSLISQNKKRK 278
           +  R    LL A      DK  +  +         L    S+      A+    Q +   
Sbjct: 166 DDPR----LLYALGFAYLDKQHLAFAETAFRRVATLTPGTSVPMMALVAQLAHRQGRLDD 221

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN------KESVESLVIVS 332
           A   LE +   +P  + AN+   L  E  +   + A  LE +            +L    
Sbjct: 222 AIAALETV-LADPAGDTANM-RRLAGEYALQADRPAQALEHLRPALAAVPADRRTLHAAL 279

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
                +G++D A A    A+          L             +       
Sbjct: 280 IAWQRLGTLDDARATLEAALTSTTDAHDLWL--ARLALEPVGGAEARALIAR 329



 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 69/263 (26%), Gaps = 41/263 (15%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI 183
           L  Q+A  + + + A   LE +L  PA     +  L  E + +      A  +   AL  
Sbjct: 208 LVAQLAHRQGRLDDAIAALETVLADPAGDTANMRRLAGEYALQADRPAQALEHLRPALAA 267

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P       A +  +        A   L     +  + +       +  +    +     
Sbjct: 268 VPADRRTLHAALIAWQRLGTLDDARATLEAALTSTTDAHD------LWLARLALEPVGGA 321

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +              + A     +      ++ + E +                     
Sbjct: 322 EARALIARWQAAMPAHVPALEAQLRVHDMAGERDQGEAV--------------------- 360

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                     A R+  +    +     + +  LE G    A       M+  P +   +L
Sbjct: 361 ----------AQRIVALEPGRISGEERLVEAMLERGEHAAAIDHVCRLMQRLPEQNRTIL 410

Query: 364 ---LAQIEQANSHNTDKILYWTQ 383
              LA ++ A     D +  W  
Sbjct: 411 RPWLAAVQDAAGRVEDALATWLA 433



 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 90/296 (30%), Gaps = 24/296 (8%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEM 145
            G +++   ++    ++      +    +  L+  L+  +AL     + A          
Sbjct: 106 RGHLALGRGDLDEVERLSRTA-ARLQPEHPQLLG-LDGMLALRRGDADRALALLSRASNA 163

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-LAKEW 204
           +   P      +Y+L F       L  A+    +   ++P       A+V Q        
Sbjct: 164 LPDDPR----LLYALGFAYLDKQHLAFAETAFRRVATLTPGTSVPMMALVAQLAHRQGRL 219

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             AI  L     +      N   L    +L+       +     A+ ++     ++ A++
Sbjct: 220 DDAIAALETVLADPAGDTANMRRLAGEYALQADRPAQALEHLRPALAAVPADRRTLHAAL 279

Query: 265 CAAKSLISQNKKRKAEVILEKIWKV--NPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            A + L + +  R     LE       + H ++      L             R +    
Sbjct: 280 IAWQRLGTLDDAR---ATLEAALTSTTDAH-DLWLARLALEPVGGAEARALIARWQAAMP 335

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSH 373
             V +L    ++    G  DQ  A A   + + P      + +   +  +E+    
Sbjct: 336 AHVPALEAQLRVHDMAGERDQGEAVAQRIVALEPGRISGEERLVEAM--LERGEHA 389


>gi|254795483|ref|YP_003080320.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           TW14359]
 gi|254594883|gb|ACT74244.1| cellulose synthase subunit [Escherichia coli O157:H7 str. TW14359]
          Length = 1002

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 197 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 254

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 255 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 314

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 315 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 374

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 375 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 431

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 432 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 485

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 486 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 537



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 429 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 488

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 489 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 548

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 549 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 583



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 102 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 156

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 157 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 216

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 217 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 260


>gi|222056118|ref|YP_002538480.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221565407|gb|ACM21379.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 573

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 22/201 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVL-----------AKEWSRAITFLNQKKKNAKEW 221
           A  +A     + P A   +  +++                 +   A++ L    + A E 
Sbjct: 20  AANHAQTPPSLQPQAVQPSINIIESRARYIFSLSRLHLLEGDLDGALSLL----QAAAEA 75

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +   A +  A +           +     +++KL      A I A   L++  + + A  
Sbjct: 76  DPQAAYIHKAEAQIYLQMNRYQDALQACEKAIKLDPEFAEAQILAGNILVALQRDKDAIP 135

Query: 282 ILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             +K  ++ P  E     +A  Y           +     L +++ +S      + K   
Sbjct: 136 YYKKAIELEPAKEDIYLHLAIAYLKTFEYEGA--VNTLKALIKVSPDSALGYYYLGKTYD 193

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
           +M   ++A      A+++ P 
Sbjct: 194 QMKLSNEAIKYYKKAVELKPD 214



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 82/264 (31%), Gaps = 23/264 (8%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A K +    +     ++  + L        +     A    + +L+I       V  L  
Sbjct: 201 AIKYYKKAVELKPDFDQAFIDL--AITQEMQGLTKDAINAYKELLKINPVNYTVVQHLVQ 258

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEW 221
              +  D+ SA          +         +    +  + +  AIT   +  +++ + +
Sbjct: 259 LYIQNKDMESALILLQDMARNNVGGQESHRKLGLILLEMERYEDAITEFCDILRQDPEAY 318

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKR 277
                +      +E+ +          AIE  K    S      A    A       ++ 
Sbjct: 319 QVRYYLASTYEEMEDFE---------TAIEEFKKIPTSSTYYYDAVGHLAYLYKEMGQEA 369

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGK-LKRALRLEEIN---KESVESLVIVS 332
           K   +L++     P      +Y +L     ++ + +     L EI+            + 
Sbjct: 370 KGIQLLKESIAEQPTKI--ELYLNLAGLYESMDRFVDGLQVLSEIDDRFPSDPRLNFRMG 427

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
            +  ++G+ D + A+    +++ P
Sbjct: 428 VLYDKIGNKDASIARMKKVLQLTP 451


>gi|108762465|ref|YP_631126.1| putative adventurous gliding motility protein [Myxococcus xanthus
           DK 1622]
 gi|108466345|gb|ABF91530.1| putative adventurous gliding motility protein [Myxococcus xanthus
           DK 1622]
          Length = 946

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 97/302 (32%), Gaps = 18/302 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI------PA 151
                ARK++    +        L+ L  ++   AE     A   L  +++       P 
Sbjct: 570 GEPAEARKLYEARVKAEPGELRALLPLAMLR-YQAEGNAAGAVRDLRALMKNRARYDEPE 628

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             E  +  L       G  ++A + A +AL +    P     +    +  ++  +A T L
Sbjct: 629 VAEV-LVHLAAAERTAGSQDAAVKSAEEALQLVKGLPEAHLQLFLVALGRRDAEKARTHL 687

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
              +   ++    + +           +   + +     E++KL    + A + A  +  
Sbjct: 688 PGFRGQLEDGALEKVL----EGRLLLLEKKPLEALEGFQEAVKLDARRLDAQLLAGVAAA 743

Query: 272 SQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           S  ++  A   L +  + +P    P  A     L    TV  ++ A+       E    L
Sbjct: 744 SAKRRDDAFRALHQALQSDPLRLEPRPATSAYWLRPRETVEGVEGAILALSEGPEDPSPL 803

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +    +       D A       +++         +  L  +++    +  ++   + +A
Sbjct: 804 LYEGLLRFHQHQFDAAERHLRSVLEVDANNAGALAYRSLIALQRGALADARRLGERSAAA 863

Query: 386 LH 387
             
Sbjct: 864 GR 865


>gi|302811837|ref|XP_002987607.1| hypothetical protein SELMODRAFT_126394 [Selaginella moellendorffii]
 gi|300144761|gb|EFJ11443.1| hypothetical protein SELMODRAFT_126394 [Selaginella moellendorffii]
          Length = 938

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 87/303 (28%), Gaps = 46/303 (15%)

Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            AL E+ +  + E ++ +L+      P      +     E    GD++ A+   T A   
Sbjct: 565 AALLEKGH-GSREAVDSLLERAVGCCPKAEVLWLLG-AKEKWLAGDIDGARAILTAAYVA 622

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P++  +  A  +    ++E  RA   L + ++      R    + +  ++   + G + 
Sbjct: 623 IPESEEIWLAAFKLEFESREPERARILLAKARERGGCSER----VWMKSAMVERELGKVA 678

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK----VNPHPE-IANI 298
                  E LK         +   +          A  + E+  +        P  +A  
Sbjct: 679 EERRLLEEGLKRFPGFHKLWLMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAA 738

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                                  KE  E  +   +     G   +A A    A++   R 
Sbjct: 739 ELEEKGGGIAKARALLTTARLKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQECRRS 798

Query: 359 EIFLL----LA-----------QIEQANSHN---------------TDKILYWTQSALHA 388
            I       +A            ++ +                    DK   W + A+ A
Sbjct: 799 GILWAASAEMAPRAQRKARSFDAVKNSEQDPFVVAVVGKFFWQDRKVDKARSWIKRAVAA 858

Query: 389 MPD 391
            PD
Sbjct: 859 APD 861



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 76/218 (34%), Gaps = 17/218 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L+  Q+         A    E  L+   PAT      +      + G +  A+   T A 
Sbjct: 699 LMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAAELEEKGGGIAKARALLTTAR 758

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
               + P +  A ++    A +W  A   + +  +        R+ +L A S E A +  
Sbjct: 759 LKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQEC-----RRSGILWAASAEMAPRAQ 813

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
             A   DA+++ +     ++A +   K      K  KA   +++   V   P+I + +  
Sbjct: 814 RKARSFDAVKNSEQDP-FVVAVV--GKFFWQDRKVDKARSWIKRA--VAAAPDIGDFWAV 868

Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           L        +     +   R +    +  E  + VSK 
Sbjct: 869 LYRFEQEHGSAEAIEEVVERCKAAEPKHGERWIRVSKA 906


>gi|194099544|ref|YP_002002674.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae NCCP11945]
 gi|291042981|ref|ZP_06568719.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293398324|ref|ZP_06642515.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae F62]
 gi|193934834|gb|ACF30658.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|291013120|gb|EFE05089.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611248|gb|EFF40332.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae F62]
 gi|317165041|gb|ADV08582.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 402

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 70  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 181

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +  A+      A+E+ K C            
Sbjct: 182 QLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIEH 241

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 292 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395


>gi|126461199|ref|YP_001042313.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126102863|gb|ABN75541.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 566

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 7/238 (2%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L    +  +     +    +  H   +     LL  QI   + Q+ +A E    +     
Sbjct: 262 LAGALSGEVDDGSTLLYARTATHLRPDHTEALLLSAQILDNQGQHQLASETYARIPTADP 321

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A           G + ++           P+   V  A+       + ++ A+   
Sbjct: 322 MFFVAEIGRADALRADGKIEASLEVLQGLARSKPELMQVHLALGDALRREERYADAVKAY 381

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +          R    L  +R + +        +  D   +L+L  +          S +
Sbjct: 382 DAAIARVPAPERQHWPLFYSRGICHERLSHWKEAEADFRRALELNPDEPQVLNYLGYSFV 441

Query: 272 SQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTVGKLKRALRLEEINK 322
            +     +A  ++E+     P        +A  Y  L   ++ V  +++A  LE ++ 
Sbjct: 442 DRGQNLEEALSMIERAVAARPESGYIIDSLAWAYFRLGRYQDAVEPMEKASLLEPVDP 499


>gi|332345495|gb|AEE58829.1| cellulose synthase operon protein C [Escherichia coli UMNK88]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|301626228|ref|XP_002942298.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
            [Xenopus (Silurana) tropicalis]
          Length = 1127

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 85/273 (31%), Gaps = 28/273 (10%)

Query: 132  AERQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                   A E      M+    +R  A+++L       G  + A+    ++L        
Sbjct: 809  LTANTTEAEEYYRRALMISPQHSR--ALFNLGNLLRNKGQDDEAELLLRESLHYGSYFGD 866

Query: 190  VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++       K +  A        K+  E     + L     +   D      +    
Sbjct: 867  AYSSLGSLLADQKRYEEADDVYQTGIKSCPE----NSDLHNNYGVFLVDMEKSQKAESHY 922

Query: 250  IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLS 304
            + +L L  +  +A +   +   S  + ++AE    K  +++   ++     A +Y     
Sbjct: 923  LHALHLRPDHHVAMLNLGRLYRSLGQNKEAEKWYRKALQISREADVISPLGALLYNTGQH 982

Query: 305  ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LL 363
            E    +L        ++  +++  + ++++   +G I +A A A       P       L
Sbjct: 983  EEAR-RL--YQEAVGLHPRNIQIRLSLAQVLAVLGQIHEAEALAYGIAAEVPDCTECFRL 1039

Query: 364  LAQI-----------EQANSHNTDKILYWTQSA 385
            L+ I           E+    N  +   W    
Sbjct: 1040 LSAIYSKREDYVKSYERVAELNPTQAQAWMNMG 1072



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 74/206 (35%), Gaps = 12/206 (5%)

Query: 171  NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
              A+ +   AL + PD       + + Y    +   A  +  +  + ++E +    +  +
Sbjct: 916  QKAESHYLHALHLRPDHHVAMLNLGRLYRSLGQNKEAEKWYRKALQISREADVISPLGAL 975

Query: 231  ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                   + G    +     E++ L   +I   +  A+ L    +  +AE +    + + 
Sbjct: 976  LY-----NTGQHEEARRLYQEAVGLHPRNIQIRLSLAQVLAVLGQIHEAEAL---AYGIA 1027

Query: 291  PH-PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
               P+    +  L +        +K   R+ E+N    ++ + +  I    G    A A 
Sbjct: 1028 AEVPDCTECFRLLSAIYSKREDYVKSYERVAELNPTQAQAWMNMGGIRHMQGDYTSARAF 1087

Query: 348  AMLAMKIAPRKEIFLL-LAQIEQANS 372
               A  + P  ++    LA++++  +
Sbjct: 1088 YQKAAVLDPDSKLLKENLAKLQRIEN 1113


>gi|238897359|ref|YP_002923036.1| putative N-acetylglucosaminyl transferase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465114|gb|ACQ66888.1| putative N-acetylglucosaminyl transferase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 392

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 46/217 (21%)

Query: 79  RNYDKGYKA-LYTGLMSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQ 135
           +     ++A L  G +  +      A ++H  +  S   TF    L      +  +A   
Sbjct: 63  KKEGSAFEAHLTLGNLFRSRGETDRAIRIHQSLMESASLTFDQRLLAIQQLGRDYMAAGL 122

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           Y+ A      +++    R  ++                                  + ++
Sbjct: 123 YDRAERMFNELIEEKNFRVSSL----------------------------------QQLL 148

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIA-----RSLENADKGDMIASYHDA 249
             Y    EW  AI    +  K+ KE     + +         +++   D  + I+   +A
Sbjct: 149 AIYQAMSEWVNAIKVAQKLIKSGKEHQHLQKKVAHFYCELALKAIAIDDISNAISLLKNA 208

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           I   K C     ASI   +  I  N   K   +L+K+
Sbjct: 209 ISVNKHCAR---ASIMLGRLYIDSNDFSKTVAVLQKV 242


>gi|119493564|ref|ZP_01624229.1| hypothetical protein L8106_25972 [Lyngbya sp. PCC 8106]
 gi|119452618|gb|EAW33800.1| hypothetical protein L8106_25972 [Lyngbya sp. PCC 8106]
          Length = 311

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 59/176 (33%), Gaps = 16/176 (9%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L+S+   ++    +    +SQ +   NEY + L   Q          A +    +L    
Sbjct: 88  LISMGQGDVKDVVEPLQKLSQMNPETNEYSILL--AQSQQYTGDLEGAAQTYRQILTQQP 145

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLA 201
            +  A+  L           +A       +  +P A       +            Y   
Sbjct: 146 GQIQALQGLVNLLLTQKRPEAAIGLLQDTIKAAPQANQAQPGTIDETSVQLILGQVYAEQ 205

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           K +  AI   ++  +N +E  R     ++A+++   D+G++  +     ++  L  
Sbjct: 206 KRYDEAIAIYDEAIRNNQEDFRP----VLAKAIVLKDQGNLEEAEPLFGKASDLAP 257


>gi|194435786|ref|ZP_03067889.1| cellulose synthase operon protein C [Escherichia coli 101-1]
 gi|253771639|ref|YP_003034470.1| cellulose synthase subunit BcsC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163452|ref|YP_003046560.1| cellulose synthase subunit BcsC [Escherichia coli B str. REL606]
 gi|300927975|ref|ZP_07143532.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|194425329|gb|EDX41313.1| cellulose synthase operon protein C [Escherichia coli 101-1]
 gi|242379048|emb|CAQ33848.1| oxidase involved in cellulose synthesis [Escherichia coli
           BL21(DE3)]
 gi|253322683|gb|ACT27285.1| cellulose synthase operon C domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975353|gb|ACT41024.1| cellulose synthase subunit [Escherichia coli B str. REL606]
 gi|253979509|gb|ACT45179.1| cellulose synthase subunit [Escherichia coli BL21(DE3)]
 gi|300463982|gb|EFK27475.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|323959461|gb|EGB55118.1| cellulose synthase operon protein C [Escherichia coli H489]
 gi|323971388|gb|EGB66627.1| cellulose synthase operon protein C [Escherichia coli TA007]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|323525184|ref|YP_004227337.1| HemY domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323382186|gb|ADX54277.1| HemY domain protein [Burkholderia sp. CCGE1001]
          Length = 396

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/385 (11%), Positives = 112/385 (29%), Gaps = 62/385 (16%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             V + +       S  + +  L         L  + R     P  +     +    K +
Sbjct: 28  GQVLLVYPPYRVDMSLNLFVVGLVVLFILLYALLRIVRSIWHMPQRVAAYRARARVAKAH 87

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQ--------------------QHTFHNEYLVYLL 125
            AL   + ++ A     A K                           ++   +E+L    
Sbjct: 88  AALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAAGLIAATAAHRMHEYARRDEWL---- 143

Query: 126 EVQIALAER-QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
               A  +   +  A      ++     R               D + A     +     
Sbjct: 144 ----AQIDGADWQDAR-----LMATADMRADGR-----------DADGALAALKEMQSQG 183

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                  +  ++     K W+  +  +   +K            +  R  + A +  +  
Sbjct: 184 GRRIHAQQITLRAQQQLKNWAEVLKLVKTLEKREAIHP-----AVAVRLRQLAAENLLRD 238

Query: 245 SYHDAIESLKLCDNSIMASICAAK-------SLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             H+A   L+L ++       + +        L++ N+ ++A  I+E     N    +  
Sbjct: 239 RRHNADALLELWNSLTPTERHSPRLADLAAELLLALNRPQEARKIVEDALAQNWDARLLR 298

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y      + +  +++A   ++   E  + L  + ++ L      +A +    A+K+A  
Sbjct: 299 RYPDTAGGDALPLIQKAEAWQKDRPEDADLLFALGRLCLHQQLWGKAQSFLERALKLADN 358

Query: 358 K----EIFLLLAQIEQANSHNTDKI 378
           +         LA++ +    + +K 
Sbjct: 359 ETLKIRSHRALARLHE-QLGDAEKA 382


>gi|212527838|ref|XP_002144076.1| DnaJ and TPR domain protein [Penicillium marneffei ATCC 18224]
 gi|210073474|gb|EEA27561.1| DnaJ and TPR domain protein [Penicillium marneffei ATCC 18224]
          Length = 707

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 33/208 (15%)

Query: 92  LMSIAA----HNIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           LM+  A     N     K           +  +    LL  +    +     A +   M 
Sbjct: 362 LMAGEAQLKIGNDNGYGKAQDVAIALLRENSQDPDALLLRARAYYGQGDNEQAVKYTRMS 421

Query: 147 LQ-IPATR--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           LQ  P  +     +  L  +  R  D  +A      A                    AK+
Sbjct: 422 LQLDPDNKKAFTLLR-LVQKLVRTKDEGNA------AFK------------------AKD 456

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           + RA+    Q  +         + LL  R+       D   +  D  E+L+L  + I A 
Sbjct: 457 YKRAVELYTQGLEIDPTNKDTNSKLLQNRAQAQLALKDYEKAVEDCTEALRLDPSYIKAQ 516

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291
              AK+  +    ++A    + + ++NP
Sbjct: 517 KIRAKAHGAAGNWQEAIKDYKNVAEINP 544



 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 82/237 (34%), Gaps = 29/237 (12%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +  Y  A ++    L++       + +             A   A +AL++ P+   +  
Sbjct: 223 QGDYERAIQEYNKALEVNPNSSIFLSNRAAAFLSANRFIEALDDAQRALELDPENSKIMH 282

Query: 193 AVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
            + +        + A+  L++ +         N    +  I ++ ++ + G   +    A
Sbjct: 283 RLARILTSLGRPAEALDVLSKVQPPASAKDRANAETMLRHITQAEDSLNHGKGGSLVVFA 342

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
           IE  +                      RK        W++            + ++N  G
Sbjct: 343 IEQARQM--LGPGV----------KTPRK--------WQLMA----GEAQLKIGNDNGYG 378

Query: 310 KLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364
           K +  A+ L   N +  ++L++ ++     G  +QA     +++++ P  K+ F LL
Sbjct: 379 KAQDVAIALLRENSQDPDALLLRARAYYGQGDNEQAVKYTRMSLQLDPDNKKAFTLL 435


>gi|156933752|ref|YP_001437668.1| tetratricopeptide repeat protein [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532006|gb|ABU76832.1| hypothetical protein ESA_01578 [Cronobacter sakazakii ATCC BAA-894]
          Length = 389

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 53/280 (18%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A      ++    T   
Sbjct: 83  GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEGMFNQLV--DETDF- 139

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                     R+G                       + ++Q Y    +W +AI    +  
Sbjct: 140 ----------RVG---------------------ALQQLLQIYQATSDWQKAIDAAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE  R   A      +L+     DM  +     +      NS   SI   +  +++ 
Sbjct: 169 KLGKEHQRVEIAHFYCELALQAMSNEDMDRAMSLLKKGAAADRNSARVSIMMGRIFMARG 228

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKESV 325
               A  +LEK+  ++   E+ +    +           +     L+R     E N    
Sbjct: 229 DYAHAVEMLEKV--ISQDRELVSETLEMLQVCYQQLGKPDEWAEFLRRC---VEENTG-A 282

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           E+ ++++++  +    D A       ++  P   +F  L+
Sbjct: 283 EAELMLAQVLEQREGADSAQIYITRQLQRHPTMRVFHRLM 322


>gi|324116599|gb|EGC10516.1| cellulose synthase operon protein C [Escherichia coli E1167]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDHDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|109896748|ref|YP_660003.1| TPR repeat-containing protein [Pseudoalteromonas atlantica T6c]
 gi|109699029|gb|ABG38949.1| TPR repeat [Pseudoalteromonas atlantica T6c]
          Length = 917

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 11/216 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           +     A E +E    I  T E      L   S    D         +AL+ SP+     
Sbjct: 379 QGNVKDAQELVEKSSSISTTAEDLTRLGLLKLSLNNLDGIVNL---EEALEKSPELESAK 435

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           + +   Y+  K++ +A+     ++  A++ N   A LL           D+  +  +  +
Sbjct: 436 KTLATAYITTKQYDKALEL--AQQWKAEDANDISAYLLAGEVFSKQQ--DLSNAKAEFEQ 491

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYT-HLLSENTV 308
            +++      A++      I++    +A+  L  +    P   P +A  Y  +     T 
Sbjct: 492 VMRIDPEHKGAALGLVNIAITEKDVVRAQSGLTALLNRFPDYTPALATAYLFNKQQGKTQ 551

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             ++          ++ E  ++ +++ L     DQA
Sbjct: 552 QGIEVIESALNKAPDNQELSMLYARVLLLEKQYDQA 587



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 30/211 (14%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--- 218
            E     D  SA      A+ ++P +P     + + Y+  K++  A   L++  +     
Sbjct: 33  QEFIAQNDSASAIISLKTAVQLAPKSPEARFELGKVYLDEKQFESAEKELSRALEYGYDG 92

Query: 219 ----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                   R         ++   +  ++  S  D  E                 SL+  N
Sbjct: 93  AKVLPLLTRAYQRTGAYAAISEMEDNNVDLSNEDKAE----------IGYFKIVSLVRLN 142

Query: 275 KKRKAEVIL--------EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           K   A  I+        + ++K      ++  Y  +L ++    L+    +++ + +  E
Sbjct: 143 KPDDARAIIADQSQLQTDSVFKS-----LSQAYKDILDKDYPLALQSLSNIKDSHPDHPE 197

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            L +++++ L +G    A       + + P 
Sbjct: 198 VLKLLAQLHLSLGDPKAAAQAFDRYVSLYPD 228



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 60/158 (37%), Gaps = 9/158 (5%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + + +  +  +   N+    ++  +  +     + A    + +LQ       A+ +L + 
Sbjct: 754 QALSAIKAHLNVSPNDGAALMMLAERQINSGD-DEAVASYQTLLQKNPNNFVALNNLAYL 812

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAK 219
             +   L+ A  YA  A+   PD     +   Q  V  +E+ +A+      +N K +N +
Sbjct: 813 YLQQNQLDKALEYAESAVKQRPDNAAAVDTYAQVLVAKEEYRKAVKQYDAVVNDKMRNEE 872

Query: 220 EW-NRNRAILL---IARSLENADKGDMIASYHDAIESL 253
            + N   A+ L           ++ +M    + A ++ 
Sbjct: 873 IYLNYVEALFLEGSTLLGKRKLEQREMKTEENIARQAQ 910



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 84/253 (33%), Gaps = 25/253 (9%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               N+ L  +L  ++ L E+QY+ A ++     Q  +              R GDL  A
Sbjct: 563 KAPDNQELS-MLYARVLLLEKQYDQALQQFVKFDQNESLPPAYWQGKGQALIRSGDLQGA 621

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           Q +  K L I+P+        +       +++  +           +      +L     
Sbjct: 622 QDHYDKWLSIAPNDKQAVVGKLLLLDNTGKFAEGVKLSEGFLAVRNDTQMQ--LLNTHFL 679

Query: 234 LENADKGDMIASYHDAIESLKLCD---NSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           L N D      +Y    + LK               A+ LI      +AE      ++  
Sbjct: 680 LMNKDMDAGRKAYEAIPQELKSMPIVKGF------RARLLIVDGDFEQAEPNAHAAYEGL 733

Query: 291 PHPEIANIYTHLLSENTVGKL-KRALRLEEIN------KESVESLVIVSKIALEMGSIDQ 343
           P+     ++       T+ +L K+   L  I            +L+++++  +  G  D+
Sbjct: 734 PNGRNLVLWV-----FTLERLNKKEQALSAIKAHLNVSPNDGAALMMLAERQINSGD-DE 787

Query: 344 AHAKAMLAMKIAP 356
           A A     ++  P
Sbjct: 788 AVASYQTLLQKNP 800



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 72/212 (33%), Gaps = 29/212 (13%)

Query: 88  LYTGLMSI---------AAHNIPLARKMHSYVSQQHTFHNE----YLVYLLEVQIALAER 134
           L  G +++           H + + + M +          E     +V     ++ + + 
Sbjct: 658 LSEGFLAVRNDTQMQLLNTHFLLMNKDMDAGRKAYEAIPQELKSMPIVKGFRARLLIVDG 717

Query: 135 QYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA-LDISPDAPW 189
            +  A        E +   P  R   ++    E  R+     A   A KA L++SP+   
Sbjct: 718 DFEQAEPNAHAAYEGL---PNGRNLVLWVFTLE--RLNKKEQALS-AIKAHLNVSPNDGA 771

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               + ++ + + +   A+       +       N  + L   +     +  +  +   A
Sbjct: 772 ALMMLAERQINSGD-DEAVASYQTLLQKNP----NNFVALNNLAYLYLQQNQLDKALEYA 826

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             ++K   ++  A    A+ L+++ + RKA  
Sbjct: 827 ESAVKQRPDNAAAVDTYAQVLVAKEEYRKAVK 858


>gi|320645346|gb|EFX14362.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str.
           493-89]
 gi|320650657|gb|EFX19123.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str. H
           2687]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|299066047|emb|CBJ37228.1| putative protoheme IX synthesis protein (hemY) [Ralstonia
           solanacearum CMR15]
          Length = 397

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/400 (13%), Positives = 116/400 (29%), Gaps = 18/400 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +  ++        + +     +V + +       S   +L  L        LL  
Sbjct: 1   MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLVSLVLVFVVLHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +       PA       +    +   AL   + S+ A     A ++              
Sbjct: 61  LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQA--WEPQRE 118

Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              L+  + A  + E     A             +  ++  L  ++    D + A     
Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236
           +               ++ +   K W+  +      +K     +   A L  +   +L  
Sbjct: 176 QLQAQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHSVLAARLKQMACETLLQ 235

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             + D         E       S   +  AA       +  +A+ I+E   K +    + 
Sbjct: 236 ERRHDADGLNDFWRELTTEERRSPRIASQAALYFAQLGRTDEAKRIVEDALKAHWDGRLI 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +    +  +++A +    +    +    +  +  +     +A +    A+K A
Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLAQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355

Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                   R    L LAQ+ +      +   ++ QSAL A
Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRQEEAQRHFRQSALLA 395


>gi|159026574|emb|CAO86506.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 447

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 56/158 (35%), Gaps = 4/158 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y  A    E  +++    E A ++   +   +G    A     +A+ + PD       
Sbjct: 122 GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPDYELAWAV 181

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
              Q      +  A++   +  +   ++    A+    +  + A+ G    +     E++
Sbjct: 182 KGNQLANLGRYEEALSACEEAIRLKPDYEVAWAV----KGNQLANLGRYEEALSACEEAI 237

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +L  +  +A       L +  +  +A    E+  ++ P
Sbjct: 238 RLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKP 275



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 78/231 (33%), Gaps = 15/231 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y  A    E  +++    E A ++   +   +G    A     +A+ + PD  +    
Sbjct: 54  GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNG 113

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
              Q      +  A++   +  +   ++          +  +  + G    +     E++
Sbjct: 114 KGNQLANLGRYEEALSAYEEAIRLKPDYE----AAWHNKGNQLGNLGRYEEALSACEEAI 169

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L  +  +A       L +  +  +A    E+  ++ P  E+A      +  N +  L R
Sbjct: 170 RLKPDYELAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWA----VKGNQLANLGR 225

Query: 314 A-LRLE------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               L        +  +   +  +       +G  ++A +    A+++ P 
Sbjct: 226 YEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPD 276



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 4/124 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A     +A+ + PD          Q      +  A++   +  +   ++      
Sbjct: 20  GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEEAIRLKPDYE----A 75

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               +  + A+ G    +     E+++L  +   A       L +  +  +A    E+  
Sbjct: 76  AWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLGRYEEALSAYEEAI 135

Query: 288 KVNP 291
           ++ P
Sbjct: 136 RLKP 139


>gi|330969298|gb|EGH69364.1| peptidase aspartic, active site protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 654

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 92/310 (29%), Gaps = 48/310 (15%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLV---YLLEVQIALAERQYNIA----------HE 141
            +   ARK  +   +         E L    +L E Q A+       A           +
Sbjct: 116 GSASHARKAIAQAPKNLDYRMMLIEALQRQQHLDEAQAAI--NDAEQALGPQQVLTRRRQ 173

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            ++  + +              +   GD ++A   A +A+   P      + +V   +  
Sbjct: 174 AIQEQVAVDK-AATGYK-----ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQ 227

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +++ A +   +        N N A LL+ R       GD   +  D  ++  +   ++ 
Sbjct: 228 GQYAEARSAATEALA----LNGNDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLP 281

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRAL 315
                A    +  +  +A   L+K        P  E+   Y    + +    +   KR  
Sbjct: 282 LRE-QASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVD 340

Query: 316 RLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           R   +      ++  S +  S  A  +    +            P +++F          
Sbjct: 341 RQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLDYQQTGDLQMPAQQVF-------DTR 393

Query: 372 SHNTDKILYW 381
              +D    W
Sbjct: 394 RAVSDLSREW 403



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 75/234 (32%), Gaps = 27/234 (11%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKE 220
           +    D + +  +A KA+  +P        +++     +    A   +    Q     + 
Sbjct: 108 AYANRDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQHLDEAQAAINDAEQALGPQQV 167

Query: 221 WNRNRAILLIARSLENADKGDMIASYHD-------AIESLKLCDNSIMASICAAKSLISQ 273
             R R  +    +++ A  G    +  D       A E+++     +        +LI+Q
Sbjct: 168 LTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQ 227

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            +  +A                A     L   +    ++R    + +  +   +    ++
Sbjct: 228 GQYAEARSA-------------ATEALALNGNDATLLVQRGQMRQRLG-DQDGARQDFAQ 273

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL--YWTQSA 385
            A+ +G++      ++ A    P + +  L    +       D++   Y+   A
Sbjct: 274 -AMAVGNLPLREQASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQA 326



 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L    +L                 TG  ++A  +   A        +       Y   L+
Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
              IA    QY  A         +    AT          +  R+GD + A++   +A+ 
Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234
           +  + P   +A +  Y    + S A+  L + +   +         A  L        +L
Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGAL 333

Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264
           +   + D             A  +++  +++   + 
Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369


>gi|324014177|gb|EGB83396.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|332296967|ref|YP_004438889.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
 gi|332180070|gb|AEE15758.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 502

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A  +   + +++    + L  LL   +A A          L+ +L +  T   A 
Sbjct: 115 GELDKAADITDTLLKKNPDDTDVL--LLSAMLAKASGDTAKKSAALKRILSLDPTNSDAN 172

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVL--AKEWSRAITFLNQK 214
             L  E     + N A+RY  K L   P       A+     V     +   + +   + 
Sbjct: 173 VELGEEQMLRRNYNQAKRYYLKGLSGDPGHE---GALFGYGQVSYYTGDDEASRSSFEKI 229

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            ++  E     ++         A+K +   +     ++LK  D+     +   + L  Q 
Sbjct: 230 LESDPE----NSLAYAYLGKLAAEKENYKVATEYIEKALKFDDDIYDYWLDYGQYLRYQG 285

Query: 275 KKRKAEVILEKIWKVNPHPE----IANIY-THLLSENTV--GKLKRALRLEEINKESVES 327
               A    E  W+     E    +A  Y   L  E       L    ++ E+N +   +
Sbjct: 286 DFAGA----ESAWRRAAELESDYFLAYAYLAGLFDEENRFDEALAMYRKVIELNPKYYFA 341

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
              +   A       +      LA  +      + L+          T +       A+ 
Sbjct: 342 YESLGMFAWHENDFAEVRRAFALARSMNEENVSYPLMIAAAYLKEGKTKESRELLGKAMR 401


>gi|320639846|gb|EFX09440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           G5101]
 gi|320655851|gb|EFX23774.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|294627349|ref|ZP_06705934.1| porphyrin biosynthesis protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598304|gb|EFF42456.1| porphyrin biosynthesis protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 421

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 19/355 (5%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   Y  +    L IL   L    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K   +KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDAEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178
            L     V++A A      A    + + +   T    +      + +   D  +A   A 
Sbjct: 120 ALAS--AVRVADARGDEAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINALDSAN 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
                +      T A+ Q     + + +      Q       ++   A L     L+ +D
Sbjct: 178 AQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQTLLQASD 237

Query: 239 KGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
              +   +    ++L+     + A +  AA            E  L+  W  +    +  
Sbjct: 238 ANALAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDES----LVR 293

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +Y  L  E    +   A R      +S   L+ ++++A       QA      A+
Sbjct: 294 LYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRAI 348


>gi|320661633|gb|EFX29048.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str. USDA
           5905]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738


>gi|291284902|ref|YP_003501720.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str.
           CB9615]
 gi|290764775|gb|ADD58736.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str.
           CB9615]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738


>gi|47211505|emb|CAF94124.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 783

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 75/255 (29%), Gaps = 44/255 (17%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A+ Y  KAL I+P        +   +    +   A + L         +    + L 
Sbjct: 439 PEEAESYYRKALAINPQHNRALFNLGNLFKSQGKEKEAESLLKDSIHFGPHFANAYSSLA 498

Query: 230 IARSLE------------------------------NADKGDMIASYHDAIESLKLCDNS 259
              + +                                D G+   +     ++++L    
Sbjct: 499 SLYAEQKRFFEAKEVYLKGIEKCPENSDLHNNYGVFLVDTGEDERAVDHYQQAIRLKPTH 558

Query: 260 IMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            +A +   + L   NK        ++A  + +K   + P   +  +Y +  +      L+
Sbjct: 559 YIAMVNLGRLLRLNNKNQEAEFWYKRALRVTKKADILTP---LGALYYN--TGRYEEALQ 613

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRKEIFLLLAQIEQAN 371
                  +  ++ +  +  +++        +A      +  K     E + LL+ I  + 
Sbjct: 614 VYREATSLQPDNTDIWLAFAQVLAVADRSGEAEKLTLEIISKEISCVECYRLLSAI-YSK 672

Query: 372 SHNTDKILYWTQSAL 386
             N  + L     AL
Sbjct: 673 RGNYTEALGALDRAL 687


>gi|260776372|ref|ZP_05885267.1| hypothetical protein VIC_001756 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607595|gb|EEX33860.1| hypothetical protein VIC_001756 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 389

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 51/287 (17%)

Query: 98  HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +       + +      +  +A    + A +  E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGFLDRAEKIFEQLVDEPDHREA 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +V  Y   +EW +AI +  Q  
Sbjct: 143 AL----------------------------------QQLVSIYQQTREWGKAIQYATQLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  ++  R   A      +++    GD   +      +L      + ASI   K  +   
Sbjct: 169 KLGRKRMRTSIAHFWCELAMQEKADGDNSRAIQHFKRALSEDPKCVRASIALGKLYLEVE 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              +    +E +      +     P +A+ Y HL  E  +    R   +      S E  
Sbjct: 229 DYAQTIKYMEMVIEQDIDFISEVLPTLADCYHHLGQEEELLDFLR-QCIVSKAGVSAE-- 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370
           ++++++  +      A       +   P     + L+    A  E+ 
Sbjct: 286 LMLAQMVAQHEGSGSAQELLTRQLVKNPTMKGFYRLMDYHLADAEEG 332


>gi|218665769|ref|YP_002425648.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218517982|gb|ACK78568.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 695

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 84/279 (30%), Gaps = 25/279 (8%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
             +F  +     L+  +A A  + + A E L      P        +L     + G L  
Sbjct: 39  LASFPGQPDALHLQGLMAHAYGRLDPAIEYLRQACASPQAAAVYWSNLAEMLRQRGRLAE 98

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
            +R A +AL   P        +         +  +  +L + +            +L   
Sbjct: 99  GERAAREALARDPQLSGAWNNLGILLQEMGRFDESREYLERVR----TAEPKDPKVLNNL 154

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                 + D  A+     +++ L           AK L  + +   A     +   ++PH
Sbjct: 155 GNTCLRQRDFSAAEQYWRQAMSLDPAYPQPYSNLAKLLTDRGEIEAAIDAGRRAITLDPH 214

Query: 293 PEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
             + + Y +L        N    L+    L     ++ ++    + +  E   + +A   
Sbjct: 215 --LTDAYINLAAAEQERHNPDAALRWVEALLAFQPQNAQAWSTKATLLKEAERLPEALQA 272

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           A  A++ AP               S + +        AL
Sbjct: 273 AEQAVQHAP--------------ESADAEYARGSVLQAL 297


>gi|212212972|ref|YP_002303908.1| tetratricopeptide repeat protein [Coxiella burnetii CbuG_Q212]
 gi|215918989|ref|NP_819562.2| tetratricopeptide repeat protein [Coxiella burnetii RSA 493]
 gi|206583874|gb|AAO90076.2| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493]
 gi|212011382|gb|ACJ18763.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
          Length = 389

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +  R G L+ A+R   + +++  +   
Sbjct: 85  GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 144

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++  Y   K+W +AI    +     +  +   A      + +  D G    +    
Sbjct: 145 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAEQMIDTGRTSQAVQCL 204

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +  +  N + AS+   +        R+A    +++ + +P
Sbjct: 205 KRAQAIDSNCVRASLIQGRLESENAHYREAIRCYKRVVEQDP 246


>gi|59801987|ref|YP_208699.1| hypothetical protein NGO1662 [Neisseria gonorrhoeae FA 1090]
 gi|239999749|ref|ZP_04719673.1| hypothetical protein Ngon3_09766 [Neisseria gonorrhoeae 35/02]
 gi|240014906|ref|ZP_04721819.1| hypothetical protein NgonD_09753 [Neisseria gonorrhoeae DGI18]
 gi|240017354|ref|ZP_04723894.1| hypothetical protein NgonFA_09371 [Neisseria gonorrhoeae FA6140]
 gi|240081497|ref|ZP_04726040.1| hypothetical protein NgonF_09348 [Neisseria gonorrhoeae FA19]
 gi|240113776|ref|ZP_04728266.1| hypothetical protein NgonM_09471 [Neisseria gonorrhoeae MS11]
 gi|240118734|ref|ZP_04732796.1| hypothetical protein NgonPID_09822 [Neisseria gonorrhoeae PID1]
 gi|240121976|ref|ZP_04734938.1| hypothetical protein NgonPI_09478 [Neisseria gonorrhoeae PID24-1]
 gi|240124273|ref|ZP_04737229.1| hypothetical protein NgonP_10113 [Neisseria gonorrhoeae PID332]
 gi|240126484|ref|ZP_04739370.1| hypothetical protein NgonSK_09818 [Neisseria gonorrhoeae SK-92-679]
 gi|254494536|ref|ZP_05107707.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260439733|ref|ZP_05793549.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae DGI2]
 gi|268595562|ref|ZP_06129729.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597597|ref|ZP_06131764.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599848|ref|ZP_06134015.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268604448|ref|ZP_06138615.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268682902|ref|ZP_06149764.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268685068|ref|ZP_06151930.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|59718882|gb|AAW90287.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226513576|gb|EEH62921.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548951|gb|EEZ44369.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268551385|gb|EEZ46404.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583979|gb|EEZ48655.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268588579|gb|EEZ53255.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268623186|gb|EEZ55586.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268625352|gb|EEZ57752.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
          Length = 389

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +  A+      A+E+ K C            
Sbjct: 169 QLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIEH 228

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 279 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 331 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|191170612|ref|ZP_03032165.1| cellulose synthase operon protein C [Escherichia coli F11]
 gi|300976750|ref|ZP_07173569.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
 gi|190909420|gb|EDV69006.1| cellulose synthase operon protein C [Escherichia coli F11]
 gi|300308487|gb|EFJ63007.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|117924125|ref|YP_864742.1| hypothetical protein Mmc1_0817 [Magnetococcus sp. MC-1]
 gi|117607881|gb|ABK43336.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 594

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 75/273 (27%), Gaps = 54/273 (19%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +           L   + L ER +  A      +++       +   +   + +  D   
Sbjct: 64  ERLADATATFSFLVGHLLLQERDWKGAEAAFTQVVESDPGAVESQVMVARLAMQGKDYEK 123

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A  +A K +D++P+                     +  + +  K   E       LL   
Sbjct: 124 ALVHARKVVDLAPEHELARRT--------------LATILRVLKRYPEAVVQYEELL--- 166

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK------- 285
                                K   +     +  A+      +  ++  ++E        
Sbjct: 167 ---------------------KQDPDDSGVRLVLAQLYGRIGRAAESSKVVEALLSHPLI 205

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            W+     E+A     L  ++    L    R   +  E +E  + +  +  ++   ++A 
Sbjct: 206 GWRA----ELAVGRGWLHQDDQAQALAAFERARAMAPEQLEPTLALGSVLQDLKKNEEAE 261

Query: 346 AKAMLAMKIAPRK-----EIFLLLAQIEQANSH 373
           A     +   PR       +  LL  ++     
Sbjct: 262 AIYRRYLDEHPRSEVVHTRLGRLLLNVDDREGA 294



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 92/274 (33%), Gaps = 18/274 (6%)

Query: 93  MSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           +++          A+ + ++   +     +    L    +    ++   A       L  
Sbjct: 211 LAVGRGWLHQDDQAQALAAFERARAMAPEQLEPTLALGSVLQDLKKNEEAEAIYRRYLDE 270

Query: 150 -PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            P +       L      + D   A    +    ++P +     +     +  + +  A+
Sbjct: 271 HPRSEVVHTR-LGRLLLNVDDREGALAVFSNLQRLAPSSVQAHLSSAFILLSQERYEEAL 329

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-A 267
             L   +    E +  R  L   ++LE   + +     +  ++   L +     S    A
Sbjct: 330 GALRLAEVQQPENSSIRYYL--GQALEYLKRDEEAVGEYAKVQ---LGETFYPESQIRIA 384

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKES 324
                  +K++   I+E ++K +P      +A  +  L ++     ++      +++ E 
Sbjct: 385 YLQSDLGRKKEGVEIVESLYKSHPTRVDVVLALNFLQLQNDQYEQVIQSTEEGLKLDPE- 443

Query: 325 VESLVIVSKI-ALE-MGSIDQAHAKAMLAMKIAP 356
            ES  + ++  A + +G   +A A     +K+ P
Sbjct: 444 -ESRFLFNRAMAYDKLGKWKEAEADLEAYIKVNP 476


>gi|269849702|sp|Q8X5M0|BCSC_ECO57 RecName: Full=Putative cellulose synthase operon protein C; Flags:
           Precursor
          Length = 1154

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 349 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 406

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 407 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 466

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 467 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 526

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 527 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 583

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 584 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 637

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 638 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 689



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 581 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 640

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 641 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 700

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 701 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 735



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 254 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 308

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 309 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 368

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 369 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 412


>gi|168746931|ref|ZP_02771953.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753343|ref|ZP_02778350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4401]
 gi|168765938|ref|ZP_02790945.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772515|ref|ZP_02797522.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779674|ref|ZP_02804681.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4076]
 gi|168797361|ref|ZP_02822368.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC508]
 gi|195935058|ref|ZP_03080440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808289|ref|ZP_03250626.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813880|ref|ZP_03255209.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820438|ref|ZP_03260758.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396215|ref|YP_002273011.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4115]
 gi|187771657|gb|EDU35501.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4196]
 gi|188018261|gb|EDU56383.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4113]
 gi|189002386|gb|EDU71372.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4076]
 gi|189359264|gb|EDU77683.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364597|gb|EDU83016.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4486]
 gi|189379934|gb|EDU98350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC508]
 gi|208728090|gb|EDZ77691.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4206]
 gi|208735157|gb|EDZ83844.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740561|gb|EDZ88243.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157615|gb|ACI35048.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4115]
 gi|326339997|gb|EGD63804.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           1125]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     AL  R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|161830717|ref|YP_001596462.1| tetratricopeptide repeat protein [Coxiella burnetii RSA 331]
 gi|161762584|gb|ABX78226.1| tetratricopeptide repeat ptrotein [Coxiella burnetii RSA 331]
          Length = 388

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +  R G L+ A+R   + +++  +   
Sbjct: 84  GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++  Y   K+W +AI    +     +  +   A      + +  D G    +    
Sbjct: 144 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAEQMIDTGRTSQAVQCL 203

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +  +  N + AS+   +        R+A    +++ + +P
Sbjct: 204 KRAQAIDSNCVRASLIQGRLESENAHYREAIRCYKRVVEQDP 245


>gi|86606356|ref|YP_475119.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86554898|gb|ABC99856.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 312

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 201 AKEWSRAI-TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             +W  A    L +      E  R + + L   +L  A  G    +      ++ +   S
Sbjct: 34  RGKWDPARAQVLLRVPLPNGELMRAQGLQLATDALRLAQFGQTEEALRRLQLAVAMVPTS 93

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRA 314
                      +      +A  +L++   + P        +   Y  L   +     +  
Sbjct: 94  SELLYVLGNVYLELGNSAQAVQVLQRARALAPQDGDVLYSLGVAY--LRQGSYFAAAETL 151

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            R   +  +S  +   +    L +   D+A  +    +++ P
Sbjct: 152 ERAVALQPDSPNARFQLGNAYLMLDQWDRARQEYEKTLELDP 193


>gi|229126932|ref|ZP_04255943.1| hypothetical protein bcere0015_13890 [Bacillus cereus BDRD-Cer4]
 gi|228656532|gb|EEL12359.1| hypothetical protein bcere0015_13890 [Bacillus cereus BDRD-Cer4]
          Length = 434

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|227819083|ref|YP_002823054.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|227338082|gb|ACP22301.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 579

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 89/299 (29%), Gaps = 31/299 (10%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L+  A      A +    +        E    ++         +   A    E   ++P 
Sbjct: 277 LIEAATGAHLWAERYDRSLDDIFAVQEEVAQMIVAA----LFGRIQEAD--FERSSRMPT 330

Query: 152 TREFA----VYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
               A    +  L +F +        A     KA+ + P        +    +    W+ 
Sbjct: 331 ASLTAYDCLLRGLAHFRAYAEDANQRACELFEKAVALDPRYALAHSYLALVRITFHGWAT 390

Query: 207 A----ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           A    +     + + A E +   +      S     + +   +   A ++  L  N   A
Sbjct: 391 APTEILDTAFAEARRATELDPQESRCHRILSEICLLRREYDMAEEHACQAFDLNPNDADA 450

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI------ANIYTHLLSENTVGKLKRAL 315
            +   + L  + +  +A   LE   ++NP HP          +Y+          LKR  
Sbjct: 451 MMEKGRVLALRGRPEEALNCLEAAVRLNPLHPPWYNSSFGIALYSLRRFGEAARALKRIP 510

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ---IEQAN 371
                      S   V+    ++G   +A A     +++ P       + +   +E+A 
Sbjct: 511 DPGTW------SRARVAACYAQLGKSAEAQAVVAEVLRLQPDFSTAEYMRKSVLLERAE 563


>gi|115532692|ref|NP_001040861.1| O-Linked GlcNAc Transferase family member (ogt-1) [Caenorhabditis
           elegans]
 gi|85662562|gb|ABC71824.1| O-linked glcnac transferase protein 1, isoform b [Caenorhabditis
           elegans]
          Length = 973

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+   +   N  +V+     +   +   ++A +  +  + +      A  +L   
Sbjct: 169 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANA 228

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A++   KAL++ P        +        +   A     +  +   E+  
Sbjct: 229 LKEKGSVVEAEQMYMKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 286

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  +     E++++      A      +L        A    
Sbjct: 287 --AAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACY 344

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  ++NP     H  +A+I+      N    ++      ++  +  ++   ++
Sbjct: 345 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYSTALKLKPDFPDAYCNLA 396


>gi|307544470|ref|YP_003896949.1| hypothetical protein [Halomonas elongata DSM 2581]
 gi|307216494|emb|CBV41764.1| TPR domain protein [Halomonas elongata DSM 2581]
          Length = 572

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 87/318 (27%), Gaps = 40/318 (12%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           + PLA  + S            L  LL  ++A     Y  A        +  A    A  
Sbjct: 27  DAPLADPLASAPPITQGLDARGLSTLLVAELAGQRGDYQRASRGYLESAERYAAANLAER 86

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +    +    D    +R A +   ++P        +        +W  A   L +     
Sbjct: 87  ATL-AARFDEDSEQLERAARRWQQLAPGDTAPARLLADLAAQKGDWDEA---LTRHLDII 142

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHD---AIESLKLCDNSIMASICAAKSLISQNK 275
           +       +  +  +LE       + +      A    +       A + AA  L +  +
Sbjct: 143 ELHGSRDLVPFLESALEAGAPPAPLLARLRDFPATPQTRHDIELATALLEAANGLTTSAR 202

Query: 276 KRKAEVILEK-----IWKVNPH-------PEIANIYT--------------------HLL 303
           +R A +  E      +W++          P+ A                         + 
Sbjct: 203 QRLARLADEAPEQPGLWRIRAAVSLDAGAPDHAETMARRGLEHTPGDPRLILLLAQAEIR 262

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             N          L E + +S +    ++++ LE G    A    +             L
Sbjct: 263 QGNITAAEANTDALLEDHGDSPDLRQALAQLYLEEGHTSPARRLLLPLTDDDATPSTVFL 322

Query: 364 LA-QIEQANSHNTDKILY 380
           +   I +      + +LY
Sbjct: 323 MLGAIAEEEGEIDNALLY 340


>gi|170018241|ref|YP_001723195.1| cellulose synthase subunit BcsC [Escherichia coli ATCC 8739]
 gi|169753169|gb|ACA75868.1| cellulose synthase operon C domain protein [Escherichia coli ATCC
           8739]
 gi|323939490|gb|EGB35699.1| cellulose synthase operon protein C [Escherichia coli E482]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|115378151|ref|ZP_01465325.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|115364825|gb|EAU63886.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
          Length = 786

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 34/297 (11%)

Query: 98  HNIPLARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
            ++ +A+       + Q    N+Y ++ L  Q  L  +    A    +           A
Sbjct: 122 GDVAIAKFQRYLAQRPQKLAVNDYQIHELIGQGHLMRKDVAAARASFQQAQAGRPESVTA 181

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L       G    A       ++  P A    E + + ++ +   + A     Q   
Sbjct: 182 QMGLASVLEMEGKDEEALALVEGLVERFPQAKEPKERLGRMFLRSGNVAGAE---TQALA 238

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             K      A LL+        +     +  +  + L++    + A I  +K+L +Q + 
Sbjct: 239 LVKLEATPAARLLLGE--VRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRN 296

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLV 329
            +A   LE   +     +  N+       +   +  R         RL E+  +     V
Sbjct: 297 EEAIKYLEAALEA----DGGNLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHV 352

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           ++       G  DQA      A+++ P                 +      W   AL
Sbjct: 353 LLGADHFATGQWDQAIEDYANALRVEP-----------------DHAGAQQWLAHAL 392



 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 30/307 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-----LAERQYNIAHEKLEMMLQIPAT 152
             + LA+K       +     E    ++  QIA      A+ +   A + LE  L+    
Sbjct: 253 GEVRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRNEEAIKYLEAALEADGG 312

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                 SL   + R G    A     + ++++P        +   +    +W +AI    
Sbjct: 313 NLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHVLLGADHFATGQWDQAIEDYA 372

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--- 269
              +   +    +  L  A +     + D      DA+  L+   +   ++  A +    
Sbjct: 373 NALRVEPDHAGAQQWLAHALAHRARGRADTNR-LDDAVRDLRRAYDLERSAAMARRLGAA 431

Query: 270 LISQNKKRKAEVILEKI-------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           L+ Q    +A  +LE+        W+ +        Y HL   N    L+  ++ E+  +
Sbjct: 432 LLEQRAFAQARPVLEQAVTLEGSTWREH----WMLGYAHLGEGNAEAALRAFIQAEKRTE 487

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI----------FLLLAQIEQANS 372
           E  +   +    AL    + +         +  P K             LL   + +  +
Sbjct: 488 EPADLADVSVGAALAEVELGRVDDAVERLSEPGPSKAARQLAEANLPLMLLRRALTRLET 547

Query: 373 HNTDKIL 379
            + +   
Sbjct: 548 ADVENAR 554


>gi|295688256|ref|YP_003591949.1| tetratricopeptide repeat-containing protein [Caulobacter segnis
           ATCC 21756]
 gi|295430159|gb|ADG09331.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter segnis ATCC
           21756]
          Length = 684

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 81/267 (30%), Gaps = 19/267 (7%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAV 157
           +  LA +    +  +    +     LL         +   A E +  + +  P      +
Sbjct: 37  DPRLAAEQARAIL-EVVPRHADTTRLL-ATALRLAGETEAALETIAPLAKALPNLPLAQL 94

Query: 158 Y-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L  E  R+G    A +   +A  + P        + +   L  + + A   L ++ +
Sbjct: 95  ELGLCLE--RLGRTAEAAQAFDRASALEPRLSEAWRGLSENLALLGDEAGAERALARQLR 152

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +          L+  +     +  +  +     E LK     + A    A++     + 
Sbjct: 153 ASTRDP------LLIEAATALGEDRLGEAERLLRERLKADPADVAAIRMLAETGARLGRY 206

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331
             AE +L +  ++   P  A    +L             L    RL +          + 
Sbjct: 207 ADAEGLLTRCLELA--PNFAAARHNLATMLYRQNKNAEALAEIQRLTDKEPRHPGYANLR 264

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358
           + I   +G  +QA A     +   P +
Sbjct: 265 AAILARLGEYEQAIAVCERMLADYPNQ 291


>gi|52841653|ref|YP_095452.1| tetratricopeptide repeat protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54297333|ref|YP_123702.1| tetratricopeptide repeat protein [Legionella pneumophila str.
           Paris]
 gi|52628764|gb|AAU27505.1| TPR domain protein (heat shock protein) N-acetylglucosaminyl
           transferase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53751118|emb|CAH12529.1| hypothetical protein lpp1378 [Legionella pneumophila str. Paris]
          Length = 389

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 68/204 (33%), Gaps = 45/204 (22%)

Query: 93  MSIAA-----HNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKL 143
           +++ +       +  A ++H  +  +         E L+ L   Q  ++   ++ A    
Sbjct: 73  LALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMAL--GQDYMSAGVFDRAERIF 130

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +++                   G  +++                  + ++  Y   K 
Sbjct: 131 LEVVE------LG-----------GSRDTS----------------SLQGLLAIYQQEKA 157

Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           W +A+  + + +      ++   A      + +      M  + +   +++ +   S+ A
Sbjct: 158 WEKALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRA 217

Query: 263 SICAAKSLISQNKKRKAEVILEKI 286
           S+  A   I + + ++A   L+++
Sbjct: 218 SLMNATIEIKEGRYKQAIRSLKRV 241


>gi|218697240|ref|YP_002404907.1| cellulose synthase subunit BcsC [Escherichia coli 55989]
 gi|218353972|emb|CAV00437.1| cellulose synthase subunit [Escherichia coli 55989]
          Length = 1157

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L + +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLHMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738


>gi|239618068|ref|YP_002941390.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239506899|gb|ACR80386.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 355

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 15/189 (7%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLK 254
            Y+   +    I +L +  +         A++    +L  A  + G    +     + L 
Sbjct: 138 LYIEEGKIDEGIKWLEEAIEKNP------ALVSAYSALGQAYFNMGKYEEAAQYWEKELI 191

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVG 309
           L    ++     A +     +  KA  +L+ +   +P+  +A      +Y  +  E    
Sbjct: 192 LVPGRVVTYFMLADAYSLSGQNDKAINVLKTLISNDPNNLLARYQLIELYREIGEEEEAK 251

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           KLK    L  I       + I +++  E G+ D+        ++ +P  +   LL  I  
Sbjct: 252 KLK-MEILNAI-PTHTNDIEIWARVQFEHGNYDRVKEIIEKFVETSPDMQHLKLLLVIPY 309

Query: 370 ANSHNTDKI 378
           A + +T K 
Sbjct: 310 AKTGDTQKA 318



 Score = 44.2 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 49/173 (28%), Gaps = 18/173 (10%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
            Y AL              A +   +  +        + Y +         Q + A   L
Sbjct: 165 AYSALGQAYF--NMGKYEEAAQY--WEKELILVPGRVVTYFMLADAYSLSGQNDKAINVL 220

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-----WVTEAVVQQY 198
           + ++        A Y L      IG+   A++   + L+  P        W      +  
Sbjct: 221 KTLISNDPNNLLARYQLIELYREIGEEEEAKKLKMEILNAIPTHTNDIEIWA-----RVQ 275

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                + R    + +  + + +    + +L+I  +      GD   +     E
Sbjct: 276 FEHGNYDRVKEIIEKFVETSPDMQHLKLLLVIPYAK----TGDTQKACRLLKE 324



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 23/206 (11%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 E+  A  FL        +    +A +   +     ++G +        E+++  
Sbjct: 104 ALADKSEYGEAQAFLQMLYDAGLD----QAAMAEMKGTLYIEEGKIDEGIKWLEEAIEKN 159

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIY-THLLSENTVGK 310
              + A     ++  +  K  +A    EK   + P        +A+ Y     ++  +  
Sbjct: 160 PALVSAYSALGQAYFNMGKYEEAAQYWEKELILVPGRVVTYFMLADAYSLSGQNDKAINV 219

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE-- 368
           LK    L   +  ++ +   + ++  E+G  ++A    M  +   P          IE  
Sbjct: 220 LK---TLISNDPNNLLARYQLIELYREIGEEEEAKKLKMEILNAIPTHTN-----DIEIW 271

Query: 369 ---QANSHNTDKILYWTQSALHAMPD 391
              Q    N D++    +  +   PD
Sbjct: 272 ARVQFEHGNYDRVKEIIEKFVETSPD 297


>gi|212218845|ref|YP_002305632.1| tetratricopeptide repeat protein [Coxiella burnetii CbuK_Q154]
 gi|212013107|gb|ACJ20487.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuK_Q154]
          Length = 389

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +  R G L+ A+R   + +++  +   
Sbjct: 85  GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 144

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++  Y   K+W +AI    +     +  +   A      + +  D G    +    
Sbjct: 145 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAQQMIDTGRTSQAVQCL 204

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +  +  N + AS+   +        R+A    +++ + +P
Sbjct: 205 KRAQAIDSNCVRASLIQGRLESENTHYREAIRCYKRVVEQDP 246


>gi|158299843|ref|XP_319863.4| AGAP009112-PA [Anopheles gambiae str. PEST]
 gi|157013713|gb|EAA14710.5| AGAP009112-PA [Anopheles gambiae str. PEST]
          Length = 886

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 78/287 (27%), Gaps = 35/287 (12%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L  +L  Q      +Y  A E L+  L   P   +   Y+L        D N A     K
Sbjct: 556 LGSVLSAQ-----GRYQEAKEALKAALNHRPNMADV-HYNLGILLQNQQDYNEAVESFRK 609

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-------NQKKKNAKEWNRNRAILLIAR 232
           A+   P        +    +       A + L           ++       R   L+  
Sbjct: 610 AIRFRPSLALAYLNLGTSLIALGRCQEAASVLREGTKLDGAGLRDRAAHENARISALLQL 669

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKV 289
               AD+G +  +     E+L              +        N+  +AE       + 
Sbjct: 670 GNLYADQGKLQRALAIYREALHTLPERYPPQGIYHRLGDIFARLNQWSEAERFQRAALEA 729

Query: 290 NP-HPEIAN-----IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            P H  IA            S  T    +   R   +           ++        ++
Sbjct: 730 QPDH--IAAHLSYGTMLARNSSRTSEAEQWFRRALRLAPNDASVHHHYAEFLSSQRRTEE 787

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           A    + A ++AP ++  L++A             L      L A  
Sbjct: 788 AFQYRVKAAELAP-EDYALVMAA---------ASSLRLLDRKLEAER 824



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 20/163 (12%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A+  +  AH     ML   ++R                 + A+++  +AL ++P+  
Sbjct: 726 ALEAQPDHIAAHLSYGTMLARNSSR----------------TSEAEQWFRRALRLAPNDA 769

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            V     +     +    A      + K A+    + A+++ A S         + +   
Sbjct: 770 SVHHHYAEFLSSQRRTEEA---FQYRVKAAELAPEDYALVMAAASSLRLLDRK-LEAERW 825

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +++KL      A       L    + ++A     +  ++ P
Sbjct: 826 YRQAVKLRPQEARAHTNLGAILHLLGRTQEAANSYREALRLQP 868


>gi|195382543|ref|XP_002049989.1| GJ20442 [Drosophila virilis]
 gi|194144786|gb|EDW61182.1| GJ20442 [Drosophila virilis]
          Length = 1050

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 262 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 321

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       N A  L   +    ++G +  +    +++L++ 
Sbjct: 322 ALKEKGQVKEAEECYNTALR----LCSNHADSLNNLANIKREQGFIEEATRLYLKALEVF 377

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
            +   A    A  L  Q K ++A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 378 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 435

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 436 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 481



 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 99/300 (33%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLV 122
             L +             GY  L   L++    ++  A + +    Q   +       L 
Sbjct: 127 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMESAVQAYITALQYNPELYCVRSDLG 184

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 185 NLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 239

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 240 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 295

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTH 301
             +      +++L  N   A    A +L  + + ++AE       ++ + H +  N   +
Sbjct: 296 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECYNTALRLCSNHADSLNNLAN 355

Query: 302 LLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E        +L     LE    +   +   ++ +  + G + +A      A++I P 
Sbjct: 356 IKREQGFIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT 413



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 327 GQVKEAEECYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 384

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I P        +       ++ S A+    +  + 
Sbjct: 385 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 444

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 445 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 493


>gi|149377376|ref|ZP_01895120.1| TPR domain protein [Marinobacter algicola DG893]
 gi|149358300|gb|EDM46778.1| TPR domain protein [Marinobacter algicola DG893]
          Length = 389

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 88/245 (35%), Gaps = 29/245 (11%)

Query: 194 VVQQYVLAKEWSRA---ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           +++ Y   KEW +A      L     +A+ + +  A +   ++ +     D   +   + 
Sbjct: 148 LIELYQQEKEWGKAGQVARTLTTGDHDARMY-KMLAYITCEQAEDALKHDDRWMAQKLSK 206

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSE 305
           E+L+   + + AS    K LI Q   R A     K++  N  PE  +             
Sbjct: 207 EALEYDRSCVRASFIMMKLLIRQGSYRDAASQSLKVFDQN--PEFGSEAVDRLMKLEREH 264

Query: 306 NTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             VG+L    +L +  +    + ++++  +          A       +++ P     L 
Sbjct: 265 GDVGRL--VKKLGKFYEAWPSTSLLLALVEAVERTSGRMAAIELLRRELEVRPSVRGLLR 322

Query: 364 LAQI---EQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS---VWLPLSPISKTLCY 417
           L ++   E+  + +  +++      + A   P++   +   S     WL   P  K    
Sbjct: 323 LVELAGYEKGMTTDEGRLVSRIGHLILANR-PVYRCVNCGFSGQQLHWL--CPSCK---- 375

Query: 418 FEWKI 422
            +W+ 
Sbjct: 376 -QWET 379


>gi|262197325|ref|YP_003268534.1| hypothetical protein Hoch_4143 [Haliangium ochraceum DSM 14365]
 gi|262080672|gb|ACY16641.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
            14365]
          Length = 2837

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 80/302 (26%), Gaps = 38/302 (12%)

Query: 86   KALYT---GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
             AL     G+ +  +    LA  +      Q +  ++        +       +  A   
Sbjct: 1900 DALTRTAKGVPAPGSGVGDLAALLIRLADAQVSAGDKDAAQASLARALTLVPDHPTALAA 1959

Query: 143  LEMMLQIPATREFAVYSLYFESC---------------------RIGDLNSAQRYATKAL 181
               +++          +   E+                      R+ D+  A+      L
Sbjct: 1960 QARLVEDERDPRAFAEARLREAEDLEDIDAKVAALMDAGLALRDRLDDIEGARAAFEAVL 2019

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
             + P     T A+        +  +A   L  + +++       A +    +      G 
Sbjct: 2020 QVLPYQSEATWALAGLVEQGGDPVQAAQVLESRLEDSSLEPAEAARIHTQLAALARQAGV 2079

Query: 242  MIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVILE---KIWKVNP 291
              A+      +L+     + A I  A  L    +        R+A   LE          
Sbjct: 2080 EAAAESHLDGALRAVPGHLPAIIARADLLGEAERFEDLEAFLREALPRLEDAPAATLAEL 2139

Query: 292  HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +  +A    HL   +     L  A +L   ++  +   + + +         +A      
Sbjct: 2140 NRRLAVACEHLGRDDEAYQILLAADKL---HRGHLMVKLALGENRYRAKRWREAALHLSA 2196

Query: 351  AM 352
              
Sbjct: 2197 LA 2198



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 65/196 (33%), Gaps = 22/196 (11%)

Query: 190  VTEAVVQQYVLA-KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A + + + A   W+     L ++    +   +  AIL    SL     G        
Sbjct: 1801 SAYAALDRQLGALGRWAELADILRRRAALTRAPEKRAAILRRRASLLVDRLGAPEEGAAA 1860

Query: 249  AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-------IWKVNPHP-----EIA 296
               +  L  ++        ++LI+  + R+A  +L+          K  P P     ++A
Sbjct: 1861 LRHARSLTPDAPGLESELVQALIAAGRTREAASLLDTRVDALTRTAKGVPAPGSGVGDLA 1920

Query: 297  NIYTHLLS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
             +   L          +     L RAL L   +  ++ +   + +   +  +  +A  + 
Sbjct: 1921 ALLIRLADAQVSAGDKDAAQASLARALTLVPDHPTALAAQARLVEDERDPRAFAEARLRE 1980

Query: 349  MLAMKIAPRKEIFLLL 364
               ++     ++  L+
Sbjct: 1981 AEDLEDI-DAKVAALM 1995



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 52/194 (26%), Gaps = 20/194 (10%)

Query: 156  AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
             +Y       R      A+    +ALD+ P       A+ +  + +  + RA   L ++ 
Sbjct: 2213 GLYHAAQAEIRSLRPEKARPLYERALDLKPKFTPALHALAELAMESGAYERAAELLLRQA 2272

Query: 216  KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-IMASICAAKSLISQ- 273
            +  +E +    +      +      D   +      ++               K L  Q 
Sbjct: 2273 EATEEPSERMRLFEALGDMALETLSDEARALSCYQAAVDAASPLEAKHVALLEKLLRRQE 2332

Query: 274  --NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKESVESLV 329
                 R A                A +       +   +  R     E  +     +  +
Sbjct: 2333 AKGDHRGAART-------------AELMASF-GSDGPSRASRYTSAAENYLAVGEPDKAL 2378

Query: 330  IVSKIALEMGSIDQ 343
              ++ A++    D 
Sbjct: 2379 AAARNAVDADPYDL 2392



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 65/253 (25%), Gaps = 42/253 (16%)

Query: 171 NSAQRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNAKEW 221
            + +  A +    ALD  P        + + Y  A   + A           K +     
Sbjct: 81  ATQRERAEEDLGRALDADPAHEDAAGLLAELYGDAGRQAEAAELFENELAALKAQAEALP 140

Query: 222 NRNRAILLIAR--------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            R RA +   R        +L   + G +  +      +  L      A   A     S 
Sbjct: 141 ERKRAPINTRRGERHRHLAALWERELGRVDRALEHWQRAWHLEPERTDAIEAARNIYASL 200

Query: 274 NKKRKAEVILEKIW---------KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
                   + E            K     E+A                       +    
Sbjct: 201 GDDSMVARLYEAQLEVMRKGGDDKARGQLELALGRIRAREGRMDDAATHLEEALRLLPGL 260

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI------EQANSHNTDKI 378
            E+L  ++++     S ++A            R+    LL ++        +   + +  
Sbjct: 261 DEALEALAEVYTSAASAERAEH----------RERACTLLLELGKRRLASASEPADEEAG 310

Query: 379 LYWTQSALHAMPD 391
           + + + AL   P 
Sbjct: 311 IAYLRRALGVQPG 323



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 8/166 (4%)

Query: 96   AAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            A      A  +M   ++  H   +  L  L E +            E    + + P  + 
Sbjct: 948  APGEAIKALEEMIREIAPGHLDAHRALRRLYEARGDFEAAVRTAERELY--LSRDPDDKL 1005

Query: 155  FAVYSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                 L           D   A +   + L +  D      A V  Y   ++W   +  L
Sbjct: 1006 A--RGLEIGRLCRDQLHDPTRAIQAFERVLYLKGDHEVALVAAVDLYARVEDWPSHVRTL 1063

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                  A E      ++     +      D   ++     + +   
Sbjct: 1064 EALVAQASEGQTRADLMTRIAQVTAERLDDRAGAFSWYRRAHEQAP 1109


>gi|189346154|ref|YP_001942683.1| hypothetical protein Clim_0617 [Chlorobium limicola DSM 245]
 gi|189340301|gb|ACD89704.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
           245]
          Length = 579

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 61/198 (30%), Gaps = 8/198 (4%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
                 A+    + +   +   AR      +     +  YL  L    +A   + Y  A 
Sbjct: 91  EAARDHAISASFLELGVIDS--ARVYAEKAAAGEPENRYYLRML--AAVAHLMKDYPRAV 146

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           E    ++Q+       +  L  E    GD   A     + L + P        V+   + 
Sbjct: 147 EIYRQLVQLEPQNSDYLTLLALEHIAAGDPEQALGIFQRLLSLDPSNNSTRSQVLLLEIK 206

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            K +  AI  L+   +  +E  R +  L     +E    G    ++ + I +       +
Sbjct: 207 LKHYENAIETLSALIEEGEEKERLKLTLGELY-VETGQNGPASKTFREIIAANSR---FV 262

Query: 261 MASICAAKSLISQNKKRK 278
            A +   +  +      +
Sbjct: 263 PAWLALLELSVKSGDSGR 280


>gi|218896548|ref|YP_002444959.1| TPR domain protein [Bacillus cereus G9842]
 gi|228900199|ref|ZP_04064431.1| hypothetical protein bthur0014_14050 [Bacillus thuringiensis IBL
           4222]
 gi|218542739|gb|ACK95133.1| TPR domain protein [Bacillus cereus G9842]
 gi|228859469|gb|EEN03897.1| hypothetical protein bthur0014_14050 [Bacillus thuringiensis IBL
           4222]
          Length = 420

 Score = 51.1 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 294

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 295 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEDLIAIVERAIDSGE 336

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 337 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 367


>gi|320193957|gb|EFW68590.1| Cellulose synthase operon protein C [Escherichia coli WV_060327]
          Length = 1140

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L ++ +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 567 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721


>gi|284007508|emb|CBA72998.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 389

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 98/346 (28%), Gaps = 73/346 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             I  A ++H  + + ++   E    LL  Q       A   Y+ A      ++     R
Sbjct: 83  GEIERAIRIHQSLFESNSLSFEQ--KLLATQQLGRDYFAAGVYDRARNIFLQLVDEQDFR 140

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+                                  ++++  Y    +W +AI    +
Sbjct: 141 FSAL----------------------------------QSLLAIYQATSDWHKAIDVAEK 166

Query: 214 KKKNA-KEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKS 269
             K    +     A      +L      ++  +    + A ++ K        SI   + 
Sbjct: 167 LVKMGNPQLKEEIAHFYCELALMELSSDNLDGAFLLLNKAAQANKNGAR---VSIMKGRI 223

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            I++ +  KA  IL++++  +           L+S+      +    L   N        
Sbjct: 224 HIARGEYEKAISILKQVFDQD---------RDLVSDTLAMLYECYYHLATWNDWEAYIQQ 274

Query: 330 IV-----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIFLLLAQ--IEQANSHNT 375
            V     +   L +  I +       A       ++  P   +F  L    +  A     
Sbjct: 275 CVAGDCGATAQLYLAEIIEKRKGTEKAQIFIKQQLERHPTMRLFYKLIDYHLADAEEGRA 334

Query: 376 DKILYWTQSAL-HAMPD-PLWIS-DDGYLSSVWLPLSPISKTLCYF 418
            + L   ++ +   +   P +     G+ +       P  ++    
Sbjct: 335 KESLELLRNMVGEQIRSKPDYRCRKCGFTTHSLYWYCPSCRSWDTI 380


>gi|218462864|ref|ZP_03502955.1| TPR repeat-containing protein [Rhizobium etli Kim 5]
          Length = 848

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 10/200 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +    D+N A     +A++++P       ++            A     +  K A E + 
Sbjct: 11  AVYESDINGALADLNRAIELAPGGSSTLNSLGLLQSSR----DANGEAEKAFKKAIELDP 66

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +L    ++   D+  M  +  +   ++ L  +  +A +   +  +   ++ KA   L
Sbjct: 67  QDPLLHANLAILYLDQARMKEAKREIDTAIALDPSFDIALLARGRYYLQTGERDKALQDL 126

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESVESLVIVSKIALEMGS 340
                 NP    + +           ++     L   + ++K     ++   + A+++  
Sbjct: 127 LAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLDKNDP--VISAFRTAVDIDD 184

Query: 341 IDQAHAKAMLAMKIAPRKEI 360
            D A      A +   R   
Sbjct: 185 YD-ADGAIRNAQEYLRRSRA 203



 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 16/170 (9%)

Query: 228 LLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L AR+   A  + D+  +  D   +++L                S++   +AE   +K 
Sbjct: 2   ALSARASYKAVYESDINGALADLNRAIELAPGGSSTLNSLGLLQSSRDANGEAEKAFKKA 61

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALR----LEEINKESVESLVIVSKIALE 337
            +++P     H  +A +Y          ++K A R       ++     +L+   +  L+
Sbjct: 62  IELDPQDPLLHANLAILYLD------QARMKEAKREIDTAIALDPSFDIALLARGRYYLQ 115

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            G  D+A    + A    P      L+         +         +A  
Sbjct: 116 TGERDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADR 165


>gi|77919353|ref|YP_357168.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380]
 gi|77545436|gb|ABA88998.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380]
          Length = 321

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 77/241 (31%), Gaps = 52/241 (21%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G + +   N+ LAR   S   Q+       L  +   Q+         A E    +L+ 
Sbjct: 72  KGNVYLNQGNLELARLHFSAALQKQPEFLPPLAGM--GQVFFKRGNTARAREIFNTVLEK 129

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-------------------- 189
                 A+  L   +   GD  +A+    +   + P+ P                     
Sbjct: 130 DPQNMVAMLGLARLARSRGDYATAETLLERLYALHPENPLIMSELAITYDSIGQDRLIKA 189

Query: 190 --VTEAVVQQY--------------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             + + V++                +L   +S A+ F ++         R +  L  A  
Sbjct: 190 EPLHKQVLELQPDIPAGYNNLGFNYLLQGLYSEAVPFFSKALAIDPADVRAKNNLATAFL 249

Query: 234 LENADKGDMIASYHDAIESLKLCDNSI--MASI-CAAKSLISQNKKRKAEVILEKIWKVN 290
           L N +           I +L+L ++++   A+        ++Q    KAE    K  ++N
Sbjct: 250 LNNEE-----------IRALQLFEDTLGKPAAYNNIGYLYMTQGNWDKAERSFRKALELN 298

Query: 291 P 291
           P
Sbjct: 299 P 299


>gi|225023387|ref|ZP_03712579.1| hypothetical protein EIKCOROL_00245 [Eikenella corrodens ATCC
           23834]
 gi|224943865|gb|EEG25074.1| hypothetical protein EIKCOROL_00245 [Eikenella corrodens ATCC
           23834]
          Length = 406

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/381 (13%), Positives = 114/381 (29%), Gaps = 27/381 (7%)

Query: 5   IRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61
           + +  V+        IV+ +      + I         +  +    +  F+    LL  +
Sbjct: 4   LIWIIVLFAAAVGLTIVAQHYSGNVYIVIDQTQTQIAVNLHLFAGAMIVFVVLLYLLLRL 63

Query: 62  SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY 120
               ++ P  +      R       AL    ++        A +  + V +     HN  
Sbjct: 64  INGIINIPGRMRRFGRSRQAHHAETALNKAGLAYFEGKFQHAEQEAAKVLENKEAGHNRT 123

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYAT 178
           L  +L V  A            L+ + Q+P  +      L     +    D  +A+    
Sbjct: 124 LALMLAVHSADQMGDDAKREGYLKEIAQLPH-KAQLSRHLLEAESALNRQDYPAAEAALA 182

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A  I+P         +Q   + ++ +  +  L++  K  K    N A     R     +
Sbjct: 183 AAAAINPKL--TRLVRLQLRYMFEQ-NNPLEVLDRVAKLEKASALNAAEAAQYREWAWRE 239

Query: 239 KGDMIASYHDAIESLKLCDNSIM--------ASICAAKSLISQNKKRKAEVILEKIWKVN 290
               + +      +LK C   I          +  A K L    +  +    ++  +  +
Sbjct: 240 ----LLALATDYPALKACLGRIPKEMQEGELCAPIAEKML-QIGQYPRVVKWVKTHYPKH 294

Query: 291 PH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            +    P +     +L        +           +    L+ + ++A       +A  
Sbjct: 295 RNAQLLPPMIEAARYLSPREQQKIMDTVEGWLNDAPQDAALLLHLGQMAYAKQLWGKAQG 354

Query: 347 KAMLAMKIAPRKEIFLLLAQI 367
               +++     +  L+LA++
Sbjct: 355 YLEASLQAQATPQARLVLAKV 375


>gi|153207791|ref|ZP_01946391.1| tetratricopeptide repeat ptrotein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|120576343|gb|EAX32967.1| tetratricopeptide repeat ptrotein [Coxiella burnetii 'MSU Goat
           Q177']
          Length = 388

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +  R G L+ A+R   + +++  +   
Sbjct: 84  GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++  Y   K+W +AI    +     +  +   A      + +  D G    +    
Sbjct: 144 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAQQMIDTGRTSQAVQCL 203

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +  +  N + AS+   +        R+A    +++ + +P
Sbjct: 204 KRAQAIDSNCVRASLIQGRLESENTHYREAIRCYKRVVEQDP 245


>gi|118578955|ref|YP_900205.1| hypothetical protein Ppro_0516 [Pelobacter propionicus DSM 2379]
 gi|118501665|gb|ABK98147.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 673

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 4/185 (2%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
             Y        +   + L   +I   +++ ++A +  + +L+       A   +      
Sbjct: 396 EQYSEFLKLKPDSPDIQLKLARILAKKKETSLAIDAYDAVLKSAPDNPEANREIAALYKA 455

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G  + A  +  KAL++  D      A+V  YV  +++      L    K A E     A
Sbjct: 456 KGMNDRAVAHYRKALELRKDDADTRSALVSLYVKNRQYDEITELL----KGAVELFPEDA 511

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  L +  K +  ++     ++ +L  +   A     +  +  ++  +A   LE  
Sbjct: 512 NNHYKLGLIHEFKKEYGSAIACYQKAAELRPDHARALNALGRMYMKTDRISEAREALEAA 571

Query: 287 WKVNP 291
            K +P
Sbjct: 572 RKADP 576



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 83/231 (35%), Gaps = 15/231 (6%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              + A    +  +   P   +  +  L       G    A    ++ L + PD+P +  
Sbjct: 355 NNLDEAVVAYKQAIRVKPDNADARLR-LADIRYERGFYQEAVEQYSEFLKLKPDSPDIQL 413

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIE 251
            + +     KE S AI   +   K+A +    NR I  + ++    D+   +A Y  A+E
Sbjct: 414 KLARILAKKKETSLAIDAYDAVLKSAPDNPEANREIAALYKAKGMNDRA--VAHYRKALE 471

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
             K   ++  A +      +   +  +   +L+   ++ P     H ++  I+       
Sbjct: 472 LRKDDADTRSALV---SLYVKNRQYDEITELLKGAVELFPEDANNHYKLGLIHEFKKEYG 528

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   +    +  E+  +   +L  + ++ ++   I +A      A K  P 
Sbjct: 529 SA--IACYQKAAELRPDHARALNALGRMYMKTDRISEAREALEAARKADPT 577


>gi|229069171|ref|ZP_04202462.1| hypothetical protein bcere0025_13770 [Bacillus cereus F65185]
 gi|229109074|ref|ZP_04238674.1| hypothetical protein bcere0018_13460 [Bacillus cereus Rock1-15]
 gi|229149816|ref|ZP_04278045.1| hypothetical protein bcere0011_13740 [Bacillus cereus m1550]
 gi|229189700|ref|ZP_04316714.1| hypothetical protein bcere0002_13770 [Bacillus cereus ATCC 10876]
 gi|228593749|gb|EEK51554.1| hypothetical protein bcere0002_13770 [Bacillus cereus ATCC 10876]
 gi|228633680|gb|EEK90280.1| hypothetical protein bcere0011_13740 [Bacillus cereus m1550]
 gi|228674352|gb|EEL29596.1| hypothetical protein bcere0018_13460 [Bacillus cereus Rock1-15]
 gi|228713923|gb|EEL65807.1| hypothetical protein bcere0025_13770 [Bacillus cereus F65185]
          Length = 434

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|157154865|ref|YP_001465000.1| cellulose synthase subunit BcsC [Escherichia coli E24377A]
 gi|157076895|gb|ABV16603.1| cellulose synthase operon protein C [Escherichia coli E24377A]
          Length = 1140

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDHDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398


>gi|317407004|gb|EFV87038.1| hypothetical protein HMPREF0005_05860 [Achromobacter xylosoxidans
           C54]
          Length = 355

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 99/346 (28%), Gaps = 34/346 (9%)

Query: 24  YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           +  +V +         S  + + ++        +   +  + L+ P  +     KR   +
Sbjct: 24  HSGNVLLLVWPWRISMSLTLAVLLIVAAFVVLYVGLRLLAWLLAIPDRVRAWRGKRAQAR 83

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL---EVQIALAERQYNIAH 140
            ++ L  G + +       A K               L  LL   +VQ        + A 
Sbjct: 84  DHELLERGWIGLLEGRYSHAEK--------------DLTRLLDQTKVQTRRVLAALSAAR 129

Query: 141 EKLEMMLQIPATREFAVY--------SLYFE-SCRIGDLNSAQRYATKALD-ISP----- 185
               +       R  AV          L    +    D+   Q  A +AL  ++P     
Sbjct: 130 AAHGLGEFDRRDRLLAVAQEHAGAEPGLVEATATVSADMLLDQGRAERALAVLAPLADGG 189

Query: 186 -DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                    +++ +       +  T      +           L+ A        G    
Sbjct: 190 ARHLHTMRLLLRAHTALHHDEQVFTLARGLLRRNALARSEGDQLIDAAGAARLRAGAAND 249

Query: 245 SYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           ++    + LK  +  +   ++  A +  +  +  +A  +LE    V  +P +   Y    
Sbjct: 250 AWRAIWKDLKAEERLLPEIALAGASAFEAAGEANEAAKVLEAAIAVKFNPALVAAYARCD 309

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +     +L +A    +      + L  +  + L      QA    +
Sbjct: 310 AGQVSRRLAKAETWLQQRPTDPDLLTALGMLCLNGQLWGQAERYLL 355


>gi|228964593|ref|ZP_04125702.1| hypothetical protein bthur0004_14380 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795127|gb|EEM42624.1| hypothetical protein bthur0004_14380 [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 434

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIV----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEDLIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|254038709|ref|ZP_04872765.1| cellulose synthase subunit [Escherichia sp. 1_1_43]
 gi|226839215|gb|EEH71238.1| cellulose synthase subunit [Escherichia sp. 1_1_43]
 gi|309703936|emb|CBJ03277.1| cellulose synthase operon protein C (TPR-repeat-containing protein)
           [Escherichia coli ETEC H10407]
          Length = 1157

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 43.4 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|195175533|ref|XP_002028500.1| GL13214 [Drosophila persimilis]
 gi|194103718|gb|EDW25761.1| GL13214 [Drosophila persimilis]
          Length = 881

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 75/185 (40%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +       N A  L   +    
Sbjct: 131 RRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKR 186

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++  +   A    A  L  Q K ++A +  ++  ++ P    A+
Sbjct: 187 EQGFIEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FAD 244

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 245 AYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 304

Query: 353 KIAPR 357
           K+ P 
Sbjct: 305 KLKPD 309



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 155 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 212

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I P        +       ++ S A+    +  + 
Sbjct: 213 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 272

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 273 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 321


>gi|159900735|ref|YP_001546982.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159893774|gb|ABX06854.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 1757

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 27/179 (15%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A E  E +L+           L     R G+L +A R   +A +I PD P +   V
Sbjct: 55  DLAKAVEAFERVLRSDPENIPVHVGLGVTYERQGNLAAAIREFEQAFEIKPDLPELRSQV 114

Query: 195 VQQYVLA----------------------KEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           ++ Y  A                      + + +AI   N    +  +  R    + +A 
Sbjct: 115 LRLYTEAWGSENARILLKKAGLGRMYVRGRRFDKAIQEFNDVLAD--DPKRVDIAVALAE 172

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +L     G    +   A + L+   + + A++     L++     K   + +   +++P
Sbjct: 173 AL--WRNGQEAEAAEVASDILRDYPDMLKANLILGYHLLAAGDP-KGRKLWQHAQQLDP 228


>gi|144898330|emb|CAM75194.1| methyltransferase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 543

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 81/274 (29%), Gaps = 13/274 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+++       A       +       +  ++L   +      +   A      +L I 
Sbjct: 50  GLLALDQGQGKRAA--GHLATAIAITPGQSALHLAMGRALEMGNEVAEASLHFRTVLNIH 107

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A   L     + G ++ A  +   A+   P        +        +   A   
Sbjct: 108 PHHAEAHARLGHLLRQQGRVDEAISHCRHAVTADPGHAEAWNTLGALLQQQGDPREAAQC 167

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L +  +    W    A+     +L+  + G++  +      ++ +  +        A  L
Sbjct: 168 LRRALQLRPVWPT--ALNNFGLALK--ECGNLAEAAAILEGAVDIRPDHAGTRTNLASVL 223

Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            +  +  +A    EK  K+ P       E+  I      E+         R   I  + +
Sbjct: 224 RAMGQLDRAREQAEKAVKLAPRDSDSWVELGLIRQAQGHEDGAA--SAFDRATAIAPDQI 281

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           +    +++    +G  D+A       + + P   
Sbjct: 282 KPWFCLAESCRAIGQTDRAAQAYRHCLTLDPDDS 315



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 89/277 (32%), Gaps = 11/277 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           E   A  + +   A      +++   +   A Y L   +   G    A  +   A+ I+P
Sbjct: 15  EAMRAYEDGKPADARRLARQLVESAPSFGGAHYLLGLLALDQGQGKRAAGHLATAIAITP 74

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                    + + +       A   L+ +       +   A   +   L    +G +  +
Sbjct: 75  GQS-ALHLAMGRALEMGN-EVAEASLHFRTVLNIHPHHAEAHARLGHLLRQ--QGRVDEA 130

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304
                 ++        A       L  Q   R+A   L +  ++ P  P   N +   L 
Sbjct: 131 ISHCRHAVTADPGHAEAWNTLGALLQQQGDPREAAQCLRRALQLRPVWPTALNNFGLALK 190

Query: 305 E--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361
           E  N            +I  +   +   ++ +   MG +D+A  +A  A+K+APR    +
Sbjct: 191 ECGNLAEAAAILEGAVDIRPDHAGTRTNLASVLRAMGQLDRAREQAEKAVKLAPRDSDSW 250

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPDPL--WIS 396
           + L  I QA  H           A    PD +  W  
Sbjct: 251 VELGLIRQAQGHEDGAASA-FDRATAIAPDQIKPWFC 286



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 11/175 (6%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              +   ++   + G    +   A + ++   +   A        + Q + ++A   L  
Sbjct: 9   TATVFTEAMRAYEDGKPADARRLARQLVESAPSFGGAHYLLGLLALDQGQGKRAAGHLAT 68

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              + P     H  +A      +             +  I+    E+   +  +  + G 
Sbjct: 69  AIAITPGQSALH--LAMGRALEMGNEVAEASLHFRTVLNIHPHHAEAHARLGHLLRQQGR 126

Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
           +D+A +    A+   P   E +  L  + Q      +      + AL     P+W
Sbjct: 127 VDEAISHCRHAVTADPGHAEAWNTLGALLQQQGDPREAAQC-LRRALQ--LRPVW 178


>gi|77462323|ref|YP_351827.1| TPR domain-containing protein [Rhodobacter sphaeroides 2.4.1]
 gi|77386741|gb|ABA77926.1| TPR domain protein [Rhodobacter sphaeroides 2.4.1]
          Length = 425

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 7/238 (2%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L    +  +     +    +  H   +     LL  QI   + Q+ +A E    +     
Sbjct: 121 LAGALSGEVDDGSTLLYARTATHLRPDHTEALLLSAQILDNQGQHQLASETYARIPTADP 180

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A           G + ++           P+   V  A+       + ++ A+   
Sbjct: 181 MFFVAEIGRADALRADGKIEASLEVLQGLARSKPELMQVHLALGDALRREERYADAVKAY 240

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +          R    L  +R + +        +  D   +L+L  +          S +
Sbjct: 241 DAAIARVPAPERQHWPLFYSRGICHERLSHWKEAEADFRRALELNPDEPQVLNYLGYSFV 300

Query: 272 SQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTVGKLKRALRLEEINK 322
            +     +A  ++E+     P        +A  Y  L   ++ V  +++A  LE ++ 
Sbjct: 301 DRGQNLEEALSMIERAVAARPESGYIIDSLAWAYFRLGRYQDAVEPMEKASLLEPVDP 358


>gi|327271921|ref|XP_003220735.1| PREDICTED: pre-mRNA-processing factor 6-like [Anolis carolinensis]
          Length = 988

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 101/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 626 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 683

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 684 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 743

Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L + +                  +  +     + LK C  SI   +  ++     
Sbjct: 744 LCEEALRHYEDFPKLWMMKGQIEEQEELIEKARDAYNQGLKKCPGSIPLWLLLSRLEEKV 803

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIV 331
            +  +A  ILEK    NP  +  +++   +       LK      + +  +E   S ++ 
Sbjct: 804 GQLTRARAILEKSRLKNPKNQ--DLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 861

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 862 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 919

Query: 391 D 391
           D
Sbjct: 920 D 920



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 335 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 391

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 392 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 443

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 444 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 496

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 497 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 542


>gi|209364103|ref|YP_001424877.2| tetratricopeptide repeat protein [Coxiella burnetii Dugway
           5J108-111]
 gi|207082036|gb|ABS76658.2| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 389

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +  R G L+ A+R   + +++  +   
Sbjct: 85  GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 144

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++  Y   K+W +AI    +     +  +   A      + +  D G    +    
Sbjct: 145 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAEQMIDTGRTSQAVQCL 204

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +  +  N + AS+   +        R+A    +++ + +P
Sbjct: 205 KRAQAIDSNCVRASLIQGRLESENAHYREAIRCYKRVVEQDP 246


>gi|195122698|ref|XP_002005848.1| GI18858 [Drosophila mojavensis]
 gi|193910916|gb|EDW09783.1| GI18858 [Drosophila mojavensis]
          Length = 1052

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 263 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 322

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       N A  L   +    ++G +  +    +++L++ 
Sbjct: 323 ALKEKGQVKDAEECYNTALR----LCSNHADSLNNLANIKREQGFIEEATRLYLKALEVF 378

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
            +   A    A  L  Q K ++A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 379 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 436

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 437 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 482



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 96/306 (31%), Gaps = 37/306 (12%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY---- 120
             L +             GY  L   L++        AR M S V               
Sbjct: 128 EALDNYRRAVRLKPDFIDGYINLAAALVA--------ARDMESAVQAYITALQYNPDLYC 179

Query: 121 ----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L  LL+        +   A       ++       A  +L       G++  A  +
Sbjct: 180 VRSDLGNLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHH 234

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             KA+ + P+       +      A+ + RA+    +    +     N A++    +   
Sbjct: 235 FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 290

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEI 295
            ++G +  +      +++L  N   A    A +L  + + + AE       ++ + H + 
Sbjct: 291 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKDAEECYNTALRLCSNHADS 350

Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            N   ++  E        +L     LE    +   +   ++ +  + G + +A      A
Sbjct: 351 LNNLANIKREQGFIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEA 408

Query: 352 MKIAPR 357
           ++I P 
Sbjct: 409 IRIQPT 414



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 328 GQVKDAEECYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 385

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I P        +       ++ S A+    +  + 
Sbjct: 386 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 445

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 446 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 494


>gi|124515962|gb|EAY57471.1| probable TPR-domain containing protein [Leptospirillum rubarum]
          Length = 1076

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 108/384 (28%), Gaps = 95/384 (24%)

Query: 96  AAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           A   + LA K          S            L   +  +   Q   A  +L  +L+ P
Sbjct: 581 ALGEVLLAEKQRDAANKAFHSALIFNPENPAAILEVSKSEILSGQGQEALSRLSALLKSP 640

Query: 151 ATREFA-----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            T+E       ++ L  E  + GD   A++    A  + P  P    ++   +     W 
Sbjct: 641 LTKERKAEVEWLWGLANE--QAGDPAKAKKALVLATSLDPGNPGYHASLGDFWADHSRWE 698

Query: 206 RAITF--------------------LNQKKKNAKEWNRNRAILLIAR------------- 232
            A                       L+ +     +  R R ++ +A              
Sbjct: 699 DARNEYRKSLALQPDNPVLELKKTWLSVQSSRKPDPARIRKVIALAETYRATHPSDISAT 758

Query: 233 ---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +           +       L    ++  A +  A  L+SQ K  +A+ +   I  +
Sbjct: 759 MLEAQGELLLNKPEKALPLFDAILSSHPDNTGARLGKAGILLSQGKTEEAKNLGTTI--L 816

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKE-------------------SV 325
             HP+     +        + +   +  R  +L + + +                     
Sbjct: 817 ADHPDNLAANLLMARIDQKNNDFTDEADRLEKLHQKHPDWIQPSLTLVAVDLKLKRFREA 876

Query: 326 ES---------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL--AQI 367
           ES                 + ++  L+M     A        K   +   ++L++  A +
Sbjct: 877 ESIADSILSVKPGLYNARFLKAQAELDMADYRGALRNLSALAKANKKPAPLYLIMSVAAM 936

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
           ++ ++            A HA PD
Sbjct: 937 KEGDTQEEKHA---LDKAFHAAPD 957



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 87/262 (33%), Gaps = 13/262 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            LAE + N A  + + +L+I        Y L     + G +  +     +A  + P    
Sbjct: 46  YLAEGKLNEAVIEFQNLLKINPKSAIGHYDLGQAYHKKGWIIESVIQDREATKLDPLMLP 105

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+ +  + + +W+ A   +    K   +        L  + +     G    +  D 
Sbjct: 106 AHIALAEYAINSGQWNPAKDEIAAILK--IDPRNAEGYALAGQRMLGL--GREKEADQDL 161

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------L 303
             +L +      A +        Q + ++A    E+  + N  P +    T L       
Sbjct: 162 KHALSIKPGYARALVALGDLKRKQGQPKEARSYYEQALQAN--PSLGRALTGLGMLAQSE 219

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           + + + + +   +  +++  ++ S ++ +      G + +A +             I + 
Sbjct: 220 NNSVLAR-EEFRKSLKVDPYNLRSRIVYANFLASGGHLHKAISALEAIPAKKSDVRIPVK 278

Query: 364 LAQIEQANSHNTDKILYWTQSA 385
           +A+ E     N   I      A
Sbjct: 279 IAEYETLLGENQKAINLLLPLA 300



 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 101/349 (28%), Gaps = 79/349 (22%)

Query: 109 YVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
             ++ +   +       L    I L E + + A    + +L        AV SL   +  
Sbjct: 495 AAARGYLKDHPENTNVRLFLANIYLREGKLSEAKGTYKTILAADPKNLPAVLSLASIAMT 554

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE------ 220
             +   A+    +AL +SPD   +  A+ +  +  K+   A    +       E      
Sbjct: 555 QKNYTEAESNFRRALTLSPDNSGLYSALGEVLLAEKQRDAANKAFHSALIFNPENPAAIL 614

Query: 221 ---------------------------WNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                                          +A +     L N   GD   +    + + 
Sbjct: 615 EVSKSEILSGQGQEALSRLSALLKSPLTKERKAEVEWLWGLANEQAGDPAKAKKALVLAT 674

Query: 254 KLCDNSIMASICAAKSLI-------SQNKKRKAEVI--------LEKIW-------KVNP 291
            L   +                   ++N+ RK+  +        L+K W       K +P
Sbjct: 675 SLDPGNPGYHASLGDFWADHSRWEDARNEYRKSLALQPDNPVLELKKTWLSVQSSRKPDP 734

Query: 292 ----------------HP-EIANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVI 330
                           HP +I+        E         L     +   + ++  + + 
Sbjct: 735 ARIRKVIALAETYRATHPSDISATMLEAQGELLLNKPEKALPLFDAILSSHPDNTGARLG 794

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKI 378
            + I L  G  ++A       +   P      LL+A+I+Q N+  TD+ 
Sbjct: 795 KAGILLSQGKTEEAKNLGTTILADHPDNLAANLLMARIDQKNNDFTDEA 843



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 96/278 (34%), Gaps = 41/278 (14%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRY 176
             ++ +   +I L E +   A   L+ +  +P       Y L     +  +   + A   
Sbjct: 340 PPIIKIGAARIELFEGKPQEASTILQSLAPVPD--LPPTYPLTQSQVALALKRPDQAVSI 397

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILL--IA 231
            T AL   P    +  ++    + AK+W  A+T +N+   +  E     + +  LL   +
Sbjct: 398 LTHALSRYPGNIDLQLSLADARMSAKQWKPALTIINEVLSDHPENIPAIQRKGFLLGKTS 457

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI---MA-SICAAKSLISQNKKRKAEVILEKIW 287
            +          A+   ++E L L           ++ AA+  +                
Sbjct: 458 GASAQIGFLQREAASVPSVEPLYLQSLLANKRPGKALAAARGYLKD-------------- 503

Query: 288 KVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
               HPE       +ANIY  L              +   + +++ +++ ++ IA+   +
Sbjct: 504 ----HPENTNVRLFLANIY--LREGKLSEAKGTYKTILAADPKNLPAVLSLASIAMTQKN 557

Query: 341 IDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDK 377
             +A +    A+ ++P    ++  L ++  A       
Sbjct: 558 YTEAESNFRRALTLSPDNSGLYSALGEVLLAEKQRDAA 595



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 60/200 (30%), Gaps = 14/200 (7%)

Query: 92   LMSIAAHNIPLARKMHSYVSQQHTFH-NEYL--VYLLEVQIALAERQYNIAHEKLEMMLQ 148
            L+++   ++ L R   +             L     L+ Q  L    Y  A   L  + +
Sbjct: 863  LVAV---DLKLKRFREAESIADSILSVKPGLYNARFLKAQAELDMADYRGALRNLSALAK 919

Query: 149  IPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWV-TEAVVQQYVLAKEWSR 206
                +   +Y +    + + GD    +    KA   +PD P V              +++
Sbjct: 920  ANK-KPAPLYLIMSVAAMKEGDTQEEKHALDKAFHAAPDDPMVLNNMAFFLASHTTHYAK 978

Query: 207  AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            A+ +  +     K       +  +   +    +      +  A  +       +      
Sbjct: 979  ALEYAKKAASIDKHPYIQDTVGYVLFRMGRFSQAQSY--FESAWNAHFRDPEFL---YHM 1033

Query: 267  AKSLISQNKKRKAEVILEKI 286
              +     + +KA  IL++ 
Sbjct: 1034 GMNEWKIGQPQKARTILKRA 1053


>gi|113868873|ref|YP_727362.1| uncharacterized enzyme of heme biosynthesis [Ralstonia eutropha
           H16]
 gi|113527649|emb|CAJ93994.1| uncharacterized enzyme of heme biosynthesis [Ralstonia eutropha
           H16]
          Length = 396

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 127/390 (32%), Gaps = 19/390 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +RL+ +  V+        + + +   +V + +       S  + L++L    F    + +
Sbjct: 1   MRLLFWVAVLFGGAVGLALFTQFNHSNVVLFYPPYRVELSLNLALALLLLLFFVVWTVMS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P        +    K   AL   + ++ A     AR   +    Q       
Sbjct: 61  TVRHLADMPRRAAAYRERSRMSKAQAALRESIENLFA--GRFARAERAAREAQSWDDQAQ 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+  + A   ++     +     +  P   +  + S+        D + A     + 
Sbjct: 119 TAALIGARAAHRMQETER-RDAWMAQVTDPEREQARLVSMAELLVDARDADGALETIAQL 177

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                    V    ++ +   K W+     A +   +   +     R + + + A   E 
Sbjct: 178 QSQGARQIHVQRIALRAHQHLKNWTEVLRLARSLEKRNALHPVLALRLKQMAVEAMLEER 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               D +  +  ++ + +     I  +  AA+   +  ++ +A  I+E   KVN    + 
Sbjct: 238 RHDADALTEFWRSLSADERRATRI--AEPAARYFAALGRQNEARRIIEDALKVNWDSRLV 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +  + + ++++A +    +    +    +  + L      +A +    A+K A
Sbjct: 296 LRYADCAVPGHALPQIQQAEKWLAAHPADADLYYTLGVLCLGEKLWGKAQSSFERALKYA 355

Query: 356 P-------RKEIFLLLAQI-EQANSHNTDK 377
                   R    L LA++ E+    +  +
Sbjct: 356 EPDQQRRLRVRTHLALARLFEETERFDDAQ 385


>gi|115532690|ref|NP_001040860.1| O-Linked GlcNAc Transferase family member (ogt-1) [Caenorhabditis
           elegans]
 gi|33112401|sp|O18158|OGT1_CAEEL RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase; AltName: Full=O-GlcNAc;
           AltName: Full=OGT
 gi|20198852|gb|AAA62535.2| O-linked glcnac transferase protein 1, isoform a [Caenorhabditis
           elegans]
          Length = 1151

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+   +   N  +V+     +   +   ++A +  +  + +      A  +L   
Sbjct: 347 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANA 406

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A++   KAL++ P        +        +   A     +  +   E+  
Sbjct: 407 LKEKGSVVEAEQMYMKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 464

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  +     E++++      A      +L        A    
Sbjct: 465 --AAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACY 522

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  ++NP     H  +A+I+      N    ++      ++  +  ++   ++
Sbjct: 523 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYSTALKLKPDFPDAYCNLA 574


>gi|312972198|ref|ZP_07786372.1| cellulose synthase operon protein C [Escherichia coli 1827-70]
 gi|310334575|gb|EFQ00780.1| cellulose synthase operon protein C [Escherichia coli 1827-70]
 gi|323934688|gb|EGB31078.1| cellulose synthase operon protein C [Escherichia coli E1520]
          Length = 1140

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 675



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721



 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398


>gi|242023889|ref|XP_002432363.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
           putative [Pediculus humanus corporis]
 gi|212517786|gb|EEB19625.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
           putative [Pediculus humanus corporis]
          Length = 1041

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++  A ++  A + +    Q           L 
Sbjct: 113 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 170

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        + + A       ++  +    A  +L       G++  A  +  KA+ 
Sbjct: 171 NLLKA-----LGRLDEAKACYLKAIETYSDFAVAWSNLGCVFNATGEIWLAIHHFEKAVA 225

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 226 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 281

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +      +++L  N   A    A +L  + +  +AE       ++ P H +  N   +
Sbjct: 282 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVPEAEDCYNTALRLCPTHADSLNNLAN 341

Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E   G ++ A RL         E   +   ++ +  + G +  A      A++I P 
Sbjct: 342 IKRE--QGYVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPT 399



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +P A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 313 GQVPEAEDCYNTALRLCPTHADSLNNL--ANIKREQGYVEEATRLYLKALEVFPEF-AAA 369

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 370 HSNLASVLQQQGKLTDALLHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 429

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G+   +      +LKL  +   A    A  L
Sbjct: 430 INPGF----ADAHSNLASIHKDSGNTTEAIQSYRTALKLKPDFPDAYCNLAHCL 479



 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 80/226 (35%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 248 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 307

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +         A  L   +    ++G +  +    +++L++ 
Sbjct: 308 ALKEKGQVPEAEDCYNTALRLCPT----HADSLNNLANIKREQGYVEEATRLYLKALEVF 363

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K   A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 364 PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 421

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+  +A      A+K+ P 
Sbjct: 422 QCYTRAIQINPGFADAHSNLASIHKDSGNTTEAIQSYRTALKLKPD 467


>gi|158522636|ref|YP_001530506.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511462|gb|ABW68429.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 587

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 21/274 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSI-----LYFFLFAW 55
           + +++  F +I++V  + I        + + WG  L   +PF+ + +     L       
Sbjct: 309 LWQIMGAFTIITVVTLAVIRFRKKAPYLLVGWGWFLIGLAPFLPVCVGQHRFLLQRYAYL 368

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115
            +L  V      C A++  +   R            ++++ +H      +   +      
Sbjct: 369 PVLGLVLGIVWGCAALMRRLGLSRCIRAVAAVAVVAMLTVISH-----AQTRHWADSLSF 423

Query: 116 FHNEYLVYLLEVQI-------ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
           F +   V     Q             +   A  +LE  L +      A Y L       G
Sbjct: 424 FRHAVEVRPACSQTRANYGEVLFLHGRNAEAIGQLEAALAVDPNNALAHYHLGRAMESAG 483

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           +  +A R+  KA+ + PD      ++            AI                   L
Sbjct: 484 NSEAAMRHFEKAVYLQPDHVPARNSLGNLLCDTGRIDEAIVHYQNALAADPSAFMVYNNL 543

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             A +L    KGD  A+     ++L +      A
Sbjct: 544 ATALTL----KGDYEAAGDMLKKALAIHPGYATA 573



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 4/118 (3%)

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             +   A+++ P          +   L    + AI  L      A + N   A   + R+
Sbjct: 421 LSFFRHAVEVRPACSQTRANYGEVLFLHGRNAEAIGQLEAAL--AVDPNNALAHYHLGRA 478

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +E+A  G+  A+     +++ L  + + A       L    +  +A V  +     +P
Sbjct: 479 MESA--GNSEAAMRHFEKAVYLQPDHVPARNSLGNLLCDTGRIDEAIVHYQNALAADP 534


>gi|209523074|ref|ZP_03271631.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209496661|gb|EDZ96959.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 891

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 74/263 (28%), Gaps = 30/263 (11%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIG 168
            +      E +    +    L E +++ A    + ++Q       A     L  +     
Sbjct: 2   ERDFQLPGELVSLHQQAIAYLEEGKFDEAIANCQQVIQQQPEWVMAYKTLGLALQKSNR- 60

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            L +A+    KA+++ P+       +   Y   + W  A   L Q       +      L
Sbjct: 61  -LEAAENAYKKAINLDPNLVAAYGNLGSLYAQQERWEEAEVTLKQAISIDPNFRG----L 115

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK---------SLISQNKKRKA 279
               +      G    +     + LKL       +I   +         +L    K  +A
Sbjct: 116 YRNLARVLTKIGRPEEAQSYWQKGLKLD------AILKQRGQEELQIGNTLAESGKWSEA 169

Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
               +K   +  HP++   +  L             +    +   I  +   S   + + 
Sbjct: 170 VSAFQKA--IAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHHHLGEA 227

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
              +     A      A+ I P 
Sbjct: 228 FQVLNKPALAVEAFRKAIAINPD 250



 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 71/234 (30%), Gaps = 53/234 (22%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +++ A    +  +        A + L     ++     A     KA+ I PD  W   
Sbjct: 163 SGKWSEAVSAFQKAIAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHH 222

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKGDMI 243
            +            A   LN+     + + +  AI          L   + +     D+ 
Sbjct: 223 HL----------GEAFQVLNKPALAVEAFRKAIAINPDFCWSYYQLAKAATQLQQWEDVA 272

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +Y  AI+   L  + +   +  +K+L    +           W+     ++  +Y  +L
Sbjct: 273 DAYQKAIQ---LKSDFLEFYLGLSKALFELKR-----------WQ-----DLVKLYPSIL 313

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           S+                 + +++   +++  +     D A       ++  P 
Sbjct: 314 SQ---------------QPDFIKNYYSLAETLVAQECWDAAFVIYEAIIEQNPS 352


>gi|145629275|ref|ZP_01785074.1| hypothetical protein CGSHi22121_10745 [Haemophilus influenzae
           22.1-21]
 gi|145633317|ref|ZP_01789048.1| hypothetical protein CGSHi3655_03771 [Haemophilus influenzae 3655]
 gi|145636915|ref|ZP_01792580.1| hypothetical protein CGSHiHH_01502 [Haemophilus influenzae PittHH]
 gi|145639204|ref|ZP_01794811.1| hypothetical protein CGSHiII_04179 [Haemophilus influenzae PittII]
 gi|319896917|ref|YP_004135112.1| hypothetical protein HIBPF05990 [Haemophilus influenzae F3031]
 gi|144978778|gb|EDJ88501.1| hypothetical protein CGSHi22121_10745 [Haemophilus influenzae
           22.1-21]
 gi|144986163|gb|EDJ92753.1| hypothetical protein CGSHi3655_03771 [Haemophilus influenzae 3655]
 gi|145269996|gb|EDK09934.1| hypothetical protein CGSHiHH_01502 [Haemophilus influenzae PittHH]
 gi|145271766|gb|EDK11676.1| hypothetical protein CGSHiII_04179 [Haemophilus influenzae PittII]
 gi|309750780|gb|ADO80764.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
 gi|317432421|emb|CBY80776.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 396

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE + + NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + + K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339


>gi|325105573|ref|YP_004275227.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974421|gb|ADY53405.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 517

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 13/192 (6%)

Query: 95  IAAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
             A       K    ++              Y+   Q A     Y    E  +  L +  
Sbjct: 160 ARAGEYRRQGKYEKALADYETLIALRKSSSYYMSAAQCASQVGNYKKTLEYYKEYLTLNP 219

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKEWSRAIT 209
               A+ ++ +E  +IG    A+ Y  KA+D+SP    P V + ++    +  +  +A +
Sbjct: 220 NSSTALNNVGYELRKIGKFQDAEVYFKKAIDVSPKNVYPLVGQTLLAY--MQGDVDKAFS 277

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AK 268
            ++        ++    I  +AR   +A +GD+IA+  D  + L      +  +  A  K
Sbjct: 278 IIDAAL----LFDTKIKIAALARGSISAQEGDLIAAESDYKQVLS-DPQHVKYAYPALTK 332

Query: 269 SLISQNKKRKAE 280
             I + +  +A 
Sbjct: 333 VYIYKGEYARAV 344


>gi|326388364|ref|ZP_08209960.1| hypothetical protein Y88_3247 [Novosphingobium nitrogenifigens DSM
            19370]
 gi|326207096|gb|EGD57917.1| hypothetical protein Y88_3247 [Novosphingobium nitrogenifigens DSM
            19370]
          Length = 1075

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 17/209 (8%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            +   AR+     +           YLL  Q A+A  +  +A   L    +       AV 
Sbjct: 869  DNDTARREADIDAALKLDGKNAEAYLLRAQGAIATGRLALADTALGE-AEKRKANALAVT 927

Query: 159  SL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT--FLNQKK 215
            SL      + GD  +A + A + +   PD       V         W +A     L+   
Sbjct: 928  SLRLDLLAKRGDATAALKLANEVVSSHPDDASTRNMVC--------WFKATRNIALDTAL 979

Query: 216  KNAKEWNRNRA---ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             +     +  A     L +R+      GD   +  D   +L    + + +      +   
Sbjct: 980  ADCDAAVKLAANTPSYLDSRAFARLRGGDTKGAITDYSAALHQSPDLVASLYGRGIAYAR 1039

Query: 273  QNKKRKAEVILEKIWKVNPHPEIANIYTH 301
               + +A   L +       P+I  ++  
Sbjct: 1040 LGDRNRALADLSRARADK--PDIDTVWAD 1066



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 72/229 (31%), Gaps = 12/229 (5%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            G    A   A  A+  SPD        +       + + A+   +    +         +
Sbjct: 804  GRREEALDQADIAIARSPDDRQTRLLRIDVRYQTGDGAGALADADYLLAHKPTA--QDYL 861

Query: 228  LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L            D      D   +LKL   +  A +  A+  I+  +   A+  L +  
Sbjct: 862  LHA----HLLPDNDTARREADIDAALKLDGKNAEAYLLRAQGAIATGRLALADTALGEA- 916

Query: 288  KVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESL-VIVSKIALEMGSID 342
            +      +A     L       +    LK A  +   + +   +  ++    A    ++D
Sbjct: 917  EKRKANALAVTSLRLDLLAKRGDATAALKLANEVVSSHPDDASTRNMVCWFKATRNIALD 976

Query: 343  QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A A    A+K+A     +L      +    +T   +    +ALH  PD
Sbjct: 977  TALADCDAAVKLAANTPSYLDSRAFARLRGGDTKGAITDYSAALHQSPD 1025


>gi|186686063|ref|YP_001869259.1| tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
 gi|186468515|gb|ACC84316.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
          Length = 381

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 4/154 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + Q + A       L I  T+  A+Y+L         L  A     +A+++         
Sbjct: 153 QGQKDAAITAYRQSLVIDPTKVAALYNLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYF 212

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        +  +AI    Q  +     +   A      +   A +G    +     ++
Sbjct: 213 NLAIALQQQGQTEQAIATYRQALQ----LDPQNATAYNNMANLLAIQGQASEAISVYRQA 268

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           ++L   +  A      +L +Q   +KA  +L++ 
Sbjct: 269 IRLNPKNASAYYNLGVTLYNQGDIKKANGVLKRA 302



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 69/250 (27%), Gaps = 37/250 (14%)

Query: 114 HTFHNEYLVYLLEVQIALAER-------QYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
                  +   LE      +            A       LQ   +   A+  L      
Sbjct: 59  KLLAETAISQDLEAASFFQQGVTRYNRKDLQGAEYAFRQALQRDPSLGAALNYLGNIFME 118

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----------------- 209
              L+ A +  T+A+ I+P+       +        +   AIT                 
Sbjct: 119 QNRLDVALQEYTEAIRINPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAALY 178

Query: 210 -----FLNQKKKNAKEWNRNRAILLIAR--------SLENADKGDMIASYHDAIESLKLC 256
                   Q++         +AI L +         ++    +G    +     ++L+L 
Sbjct: 179 NLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQALQLD 238

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
             +  A    A  L  Q +  +A  +  +  ++NP    A     +   N     K    
Sbjct: 239 PQNATAYNNMANLLAIQGQASEAISVYRQAIRLNPKNASAYYNLGVTLYNQGDIKKANGV 298

Query: 317 LEEINKESVE 326
           L+  + E  E
Sbjct: 299 LKRAHTEYRE 308


>gi|297196365|ref|ZP_06913763.1| tetratricopeptide TPR_2 domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297153196|gb|EDY64746.2| tetratricopeptide TPR_2 domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 743

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 9/135 (6%)

Query: 170 LNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
              A     +A ++ P     W    VV      + +  A   L +  +           
Sbjct: 370 PEEALSCFGRAAELEPRDGLVWANRGVV--LAGLERYEEAEESLARAYQLRP----RDLY 423

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +L++RS     +G + A+  D  E+L++    I A +  A+ L +  +  +A   L+   
Sbjct: 424 VLVSRSNFRVRRGQLDAALDDIDEALRVAPRHIPALVNKAQLLNALGRPGEALACLDTAA 483

Query: 288 KVNP-HPEIANIYTH 301
           ++ P   ++ + Y H
Sbjct: 484 EIAPETRQVWSTYVH 498


>gi|195430888|ref|XP_002063480.1| GK21381 [Drosophila willistoni]
 gi|194159565|gb|EDW74466.1| GK21381 [Drosophila willistoni]
          Length = 1059

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 83/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 268 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 327

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       N A  L   +    ++G +  +    +++L++ 
Sbjct: 328 ALKEKGQVKEAEECYNTALR----LCSNHADSLNNLANIKREQGYIEEATRLYLKALEVF 383

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
            +   A    A  L  Q K + A    ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 384 PDFAAAHSNLASVLQQQGKLKDALNHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 441

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 442 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 487



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 97/300 (32%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +             GY  L   L++    ++  A + +    Q           L 
Sbjct: 133 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMEAAVQAYITALQYNPDLYCVRSDLG 190

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 191 NLLKA-----LGRLEEAKACYLKAIETCPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 245

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 246 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 301

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTH 301
             +      +++L  N   A    A +L  + + ++AE       ++ + H +  N   +
Sbjct: 302 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECYNTALRLCSNHADSLNNLAN 361

Query: 302 LLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E        +L     LE    +   +   ++ +  + G +  A      A++I P 
Sbjct: 362 IKREQGYIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKDALNHYKEAIRIQPT 419



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 333 GQVKEAEECYNTALRLCSNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPDFAAAH 390

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I P        +       ++ S A+    +  + 
Sbjct: 391 SNLASVLQQQGKLKDALNHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 450

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 451 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 499


>gi|154284670|ref|XP_001543130.1| hypothetical protein HCAG_00176 [Ajellomyces capsulatus NAm1]
 gi|150406771|gb|EDN02312.1| hypothetical protein HCAG_00176 [Ajellomyces capsulatus NAm1]
          Length = 430

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%)

Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+ V+  L          A   +  ML+          +          G+   A ++ 
Sbjct: 81  RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 138

Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225
             AL + PD+          + +++          ++++  AI    +  +   +     
Sbjct: 139 KLALSLDPDSTQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 198

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + LL  R+    +      +  D   +LKL    + A    AK+  +     +A    +K
Sbjct: 199 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 258

Query: 286 IWKVNP 291
           I + NP
Sbjct: 259 IAEANP 264


>gi|113474031|ref|YP_720092.1| group 1 glycosyl transferase [Trichodesmium erythraeum IMS101]
 gi|110165079|gb|ABG49619.1| glycosyl transferase, group 1 [Trichodesmium erythraeum IMS101]
          Length = 3301

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%)

Query: 130  ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            AL   +   A       L+I      A YSL         L  A     K ++I P+   
Sbjct: 1749 ALLPGKLEEAITYYYKALEIDPYLTEAYYSLANIFVNQNQLKKAVIIYKKLIEIQPNIWE 1808

Query: 190  VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                +    +  + +S  I+ L    K         +I  +  +   A  G +  + +  
Sbjct: 1809 NYHNLGNILIEQENFSEGISALYYAIKLNPSS----SISYLKLAEILAKSGKLSEAINAY 1864

Query: 250  IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304
             + + +  N   A       L ++ +K +A  +  K  ++ P     H ++ +++     
Sbjct: 1865 QKVIFIDPNLAEAYQYLGDILRNKGEKEEAIKVYRKAIEIQPQLWTVHHKLGSLFQETEK 1924

Query: 305  ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                    R  +  E+N +   S   +  + + +    +A      A+++ P 
Sbjct: 1925 LEAATNAYR--KSIELNPDFCWSYNNLGDVLVRLEKWSEAAGAYGRAIELNPD 1975


>gi|55980598|ref|YP_143895.1| TPR repeat-containing O-linked GlcNAc transferase [Thermus
           thermophilus HB8]
 gi|55772011|dbj|BAD70452.1| putative O-linked GlcNAc transferase (TPR repeat) [Thermus
           thermophilus HB8]
          Length = 355

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 89/242 (36%), Gaps = 17/242 (7%)

Query: 160 LYFESCRI----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           LY ++       G L  A      A  ++P    +       Y L  E  +A   L Q  
Sbjct: 110 LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQAL 169

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                     A+  +  S+   D+   +A Y  A+E      +     +  A +L+ + K
Sbjct: 170 ALEDTPEIRSALAELYLSMGRLDEA--LAQYAKALEQAPKDLDLR---VRYASALLLKGK 224

Query: 276 KRKAEVILEKIWKVNPHPE-----IANIYTHL-LSENTVGKLKRALRLEEINKESVESLV 329
             +A  +LE+  ++ P        +   Y  L  ++     L+ A+ L  +      +  
Sbjct: 225 AEEAARVLEEGHRIKPLNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLR--FPAAYY 282

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
            + ++ L +G   +A ++  +A+++ P++  +     +      + +   Y  Q AL   
Sbjct: 283 YLGQVYLALGDYPKAKSRLTVAVRLEPKRAEYRYSLCLANEKLGDKEGARYQCQEALKLR 342

Query: 390 PD 391
           PD
Sbjct: 343 PD 344



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 69/206 (33%), Gaps = 9/206 (4%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +   +G  ++A     +AL  +P  P     + +  +     + A+           
Sbjct: 35  LGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTP 94

Query: 220 EW-----NRNRAILLIARSLENADKGD--MIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            +       + A + + R  E+ ++G   +  +     ++ ++        +        
Sbjct: 95  RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL 154

Query: 273 QNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             ++ KAE  L++   +   PEI  A    +L        L +  +  E   + ++  V 
Sbjct: 155 LGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVR 214

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
            +   L  G  ++A        +I P
Sbjct: 215 YASALLLKGKAEEAARVLEEGHRIKP 240


>gi|148825817|ref|YP_001290570.1| hypothetical protein CGSHiEE_03850 [Haemophilus influenzae PittEE]
 gi|148715977|gb|ABQ98187.1| hypothetical protein CGSHiEE_03850 [Haemophilus influenzae PittEE]
 gi|301169964|emb|CBW29568.1| conserved protein [Haemophilus influenzae 10810]
 gi|309972961|gb|ADO96162.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 396

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE + + NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + + K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEEG 339


>gi|307718008|ref|YP_003873540.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306531733|gb|ADN01267.1| putative TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 482

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 97/337 (28%), Gaps = 53/337 (15%)

Query: 40  SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99
           +  ++L      +   IL    + + LS P        +R   +  + +           
Sbjct: 29  ALPLLLPAAIVLVGLVILTVYFNLYVLSDPEK----KAERKKRRDRQTI----------- 73

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATR---- 153
                 +     +      +    ++  +    ++++  A +  +++ +     T+    
Sbjct: 74  ------LKKAQRRLVQNPRDPEALVVLAEAYFEDQEWEKALKLYQVLAEGVTDRTKVDEY 127

Query: 154 -EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  +   + R+G    A +    A  + P+A  V   +     L   +  A+  L+
Sbjct: 128 EVQVRRGVC--AFRLGRHEEAYQAFAVAYSLKPEAFEVRFHMGALEYLRGAYEHAVKLLS 185

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  E    R  L    SL     G    +       L    +        A  L +
Sbjct: 186 AAAAQQPEHPETRRYL----SLALHRSGKYKEALPSIRAILNEMPDDKELLFAYADCLAN 241

Query: 273 QNKKRKAEVI-----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-- 325
             +K +A  I     +++ W           +   L    + + +RA++  EI       
Sbjct: 242 LGQKEQALSIFTHLRVDEQWGPQ------ACFRAGLINLGLHRYERAIKDLEIGVRHRGM 295

Query: 326 ------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 E    +++  +    I +A        +  P
Sbjct: 296 DNQLRLEMEYRLAQAYIHQKEIRKAVEHLRAVQRTNP 332


>gi|2266992|gb|AAB63465.1| O-linked GlcNAc transferase [Caenorhabditis elegans]
          Length = 1151

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+   +   N  +V+     +   +   ++A +  +  + +      A  +L   
Sbjct: 347 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANA 406

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A++   KAL++ P        +        +   A     +  +   E+  
Sbjct: 407 LKEKGSVVEAEQMYMKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 464

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  +     E++++      A      +L        A    
Sbjct: 465 --AAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACY 522

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  ++NP     H  +A+I+      N    ++      ++  +  ++   ++
Sbjct: 523 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYSTALKLKPDFPDAYCNLA 574


>gi|148358954|ref|YP_001250161.1| N- acetylglucosaminyl transferase [Legionella pneumophila str.
           Corby]
 gi|296107003|ref|YP_003618703.1| TPR domain protein (heat shock protein) [Legionella pneumophila
           2300/99 Alcoy]
 gi|148280727|gb|ABQ54815.1| TPR domain protein (heat shock protein) N- acetylglucosaminyl
           transferase [Legionella pneumophila str. Corby]
 gi|295648904|gb|ADG24751.1| TPR domain protein (heat shock protein) [Legionella pneumophila
           2300/99 Alcoy]
          Length = 389

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 68/204 (33%), Gaps = 45/204 (22%)

Query: 93  MSIAA-----HNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKL 143
           +++ +       +  A ++H  +  +         E L+ L   Q  ++   ++ A    
Sbjct: 73  LALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMAL--GQDYMSAGVFDRAERIF 130

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +++                   G  +++                  + ++  Y   K 
Sbjct: 131 LEVVE------LG-----------GSRDTS----------------SLQGLLAIYQQEKA 157

Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           W +A+  + + +      ++   A      + +      M  + +   +++ +   S+ A
Sbjct: 158 WEKALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRA 217

Query: 263 SICAAKSLISQNKKRKAEVILEKI 286
           S+  A   I + + ++A   L+++
Sbjct: 218 SLMNATIEIKEGRYKQAIRSLKRV 241


>gi|53719291|ref|YP_108277.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243]
 gi|52209705|emb|CAH35664.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243]
          Length = 1454

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 777 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 829

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 830 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 889

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 890 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 949

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 950 LERRDDAIAA--LQRALE 965



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             R  D   A + A +A+ ++PD         +  +   ++  A++   + ++   +   +
Sbjct: 880  RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 939

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A L+ A +     + D IA+   A+E          A     +  +   +  KA  + +
Sbjct: 940  YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 995

Query: 285  KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +   V  H E+A+        Y +L + +     L+RA    EI   + E+L  +  +  
Sbjct: 996  R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1050

Query: 337  EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             +  + ++      A+ I     + + LA
Sbjct: 1051 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1079


>gi|298492452|ref|YP_003722629.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
 gi|298234370|gb|ADI65506.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 280

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                     A     + +   P     +        S   GD  +A     +A+ ++ +
Sbjct: 102 AYFDVGNKEGAIADYNQALRLNPNDAETYNNRGNARASL--GDQQNAITDYNEAIRLANN 159

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                             + A+    Q  +  + +    A+    R    A +GD   + 
Sbjct: 160 YAQAYNNRGNARATQGHKNGALADYTQAIRIDQNY----AVAYNNRGNTYASQGDQQKAI 215

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            D  ++++L  N   A      +  +   KR A   L++ 
Sbjct: 216 ADYNQAIRLNPNFAPAFNNRGNAFAATGDKRSALQDLQRA 255


>gi|156384218|ref|XP_001633228.1| predicted protein [Nematostella vectensis]
 gi|156220295|gb|EDO41165.1| predicted protein [Nematostella vectensis]
          Length = 556

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 6/163 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
                 +K +  + +  +A++L A  L+  DK     +     E++KL  ++  A     
Sbjct: 325 RAVYFAQKAHTIDSHNVQALILKASLLQALDK--YQEALLHFREAVKLSPSNFEAVKGLV 382

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKR---ALRLEEINKE 323
           +  +S  + R A  I +   K              +++ +   + K      +   ++  
Sbjct: 383 ECYLSAERFRDAMAIAKNALKTLGTTTRTLTLCASVITHDPSTQEKAKSMLEKALSLDPG 442

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
             E++ ++++I       D+A       +       +  LL  
Sbjct: 443 HTEAVCLLAEILGHKQEYDKAIELLKKHLINHRTARLHQLLGD 485



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 5/125 (4%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             ++        A  +  +A+ +SP      + +V+ Y+ A+ +  A+       K    
Sbjct: 350 LLQALDK--YQEALLHFREAVKLSPSNFEAVKGLVECYLSAERFRDAMAIAKNALKTLGT 407

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             R   +     S+   D      +     ++L L      A    A+ L  + +  KA 
Sbjct: 408 TTRTLTLCA---SVITHDPSTQEKAKSMLEKALSLDPGHTEAVCLLAEILGHKQEYDKAI 464

Query: 281 VILEK 285
            +L+K
Sbjct: 465 ELLKK 469



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 46/172 (26%), Gaps = 40/172 (23%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGD--------- 169
             +L+  +  A  +Y  A       +++  +   AV  L   Y  + R  D         
Sbjct: 343 ALILKASLLQALDKYQEALLHFREAVKLSPSNFEAVKGLVECYLSAERFRDAMAIAKNAL 402

Query: 170 -----------------------LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                                     A+    KAL + P        + +     +E+ +
Sbjct: 403 KTLGTTTRTLTLCASVITHDPSTQEKAKSMLEKALSLDPGHTEAVCLLAEILGHKQEYDK 462

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           AI  L +        N   A L        A   +   +     +SL L   
Sbjct: 463 AIELLKKHLI-----NHRTARLHQLLGDFLATTNEYQDALDQYTKSLSLNPG 509


>gi|126451956|ref|YP_001066323.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a]
 gi|134277247|ref|ZP_01763962.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
 gi|126225598|gb|ABN89138.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
 gi|134250897|gb|EBA50976.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
          Length = 1454

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 777 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 829

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 830 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 889

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 890 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 949

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 950 LERRDDAIAA--LQRALE 965



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154
            H+  LA +      Q     ++    LL  ++AL    ++ A  + E + +         
Sbjct: 883  HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 940

Query: 155  FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
              +        R  D  +A +   +AL+++   P      VQ Y+  +++ +A+     +
Sbjct: 941  ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 995

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +          A  +      N    D   +      +L++  ++  A       L   +
Sbjct: 996  RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 1053

Query: 275  KKRKAEVILEKI 286
            +  ++E +L + 
Sbjct: 1054 RLAESEEVLRRA 1065



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%)

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             ++A+ Y  +A+ + PD               ++   A    +  +  A + + +   L 
Sbjct: 820  PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 875

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            +AR        D   +   A  +++L  +   A +  A+  +      +A    E+    
Sbjct: 876  LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 930

Query: 290  NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
               P+    Y +L          ++ +  L+RAL L   +  ++ + V   +  L     
Sbjct: 931  EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 987

Query: 342  DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            D+A   A   +           +  +   N    D+     + AL   P
Sbjct: 988  DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 1036


>gi|194365427|ref|YP_002028037.1| tetratricopeptide repeat-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194348231|gb|ACF51354.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 392

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 19/299 (6%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++       A R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVNRHDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             + ++  Y   ++W +AI    + +    +   +         +      G +  +   
Sbjct: 148 ALKHLIGIYQAERDWEKAIDNATRFEDVTGEPMGKLIGQFECELAERFRGAGKLEEARAA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306
              + +    S+ A I   +          A    E+  + +P   PE+      + +  
Sbjct: 208 IARAYQADAMSVRAGIIEGRLETDAGNAEAAVRAFERAARNDPEYLPELLPAL--MANYR 265

Query: 307 TVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            VG L  A        E    +   + ++++  E   +  A A     +K  P       
Sbjct: 266 KVGDLGGARAFLSEMTEHYRGIAPVLALTRLMEEQEGVAPARAYLGRQLKDRPSVRGESA 325

Query: 364 LAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTLCY 417
           L  +  A   ++   L+  +     +   +P +       G  +  W    P  K    
Sbjct: 326 LIDLTLAEGADSTATLHDLKHITDQLLVRNPAYRCTRCGFGARTHHWQ--CPSCKEWGT 382


>gi|222054003|ref|YP_002536365.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221563292|gb|ACM19264.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 627

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + +  Y +     +++   +L   ++ ++ + Y  A  +     ++      A   L   
Sbjct: 390 QAIEQYHALLKLKNDDAATHLKLARVYVSSKDYTTAISEYLATTKLEPDNIEAHRELAQL 449

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +      A +     L +  D      A+   YV  K++   I  L    K   E N 
Sbjct: 450 YRKKNQNEEAAKEYQAVLKVKKDDNDARTALTSIYVKNKKYDELIGLL----KEGVEQNP 505

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                     L    K D  A+     E+  L  +   A     ++ +      +A+  L
Sbjct: 506 KDPNSHYKLGLMYEFKKDYTAATDHYKEATALKADHAKALNALGRAYMKSGHITEAKEAL 565

Query: 284 EKIWKVNP 291
           E   K NP
Sbjct: 566 EAAKKANP 573



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 92/295 (31%), Gaps = 41/295 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148
           G+ +I+       + +      Q        ++ L  +    +     A    E +L   
Sbjct: 204 GVAAISFGRNEFDKAIDELKKAQSADPGNKEIHRLLAEAYEKKGDRKSAE--YESLLAGV 261

Query: 149 --IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                T     Y       R GD   A +   KA+          +A ++      +W  
Sbjct: 262 QVKSETASLPDY------LRQGDSFMATKEFEKAIA-------EYKAALK---EKPDWPE 305

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+  L          N +   +   +       GD I  Y   +   +     +  ++  
Sbjct: 306 ALQKLGDACMA---VNNDDDAITYYKEAVRLKAGDDIIHYKLGVLYERQA--LLDEAVVE 360

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
            +  +S      A   L+          +A+IYT     +    +++   L ++  +   
Sbjct: 361 YRQYLST-----AADNLDA------RRRLADIYT--QRGSYPQAIEQYHALLKLKNDDAA 407

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
           + + ++++ +       A ++ +   K+ P   E    LAQ+ +  + N +    
Sbjct: 408 THLKLARVYVSSKDYTTAISEYLATTKLEPDNIEAHRELAQLYRKKNQNEEAAKE 462


>gi|330917583|ref|XP_003297866.1| hypothetical protein PTT_08422 [Pyrenophora teres f. teres 0-1]
 gi|311329167|gb|EFQ93997.1| hypothetical protein PTT_08422 [Pyrenophora teres f. teres 0-1]
          Length = 669

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 80/247 (32%), Gaps = 24/247 (9%)

Query: 88  LYTGLMSIAAHNI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L  G   +   N   L    +  +S     + +    +L  +I  A+ + + A +     
Sbjct: 317 LMRGEAHLRMGNANALGEAQNVAMSLLRYNNQDPDALVLRGRILYAQGENDKAVQHFRQA 376

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L                     D  +A +Y      +         A       A  +  
Sbjct: 377 LNCDP-----------------DFKTAVKYLRMVQKLDRLKSEGNAAF-----KAGRYQE 414

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           AI   +Q            + +L  R+L ++ +     +  D  ++L+L  +   A    
Sbjct: 415 AIDTYSQALAVDPSNKSTNSKILQNRALCHSRQRSWKHAIADCEKALELDPSYTKARKTR 474

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           AK+L       +A   L+ I + NP  P IA        E    K K   ++  I K++ 
Sbjct: 475 AKALGENGNWEEAVRDLKAIAEENPSEPGIAKEIREAEMELKKSKRKDYYKILGIQKDAT 534

Query: 326 ESLVIVS 332
           E+ +  +
Sbjct: 535 ETEIKKA 541


>gi|221135423|ref|ZP_03561726.1| hypothetical protein GHTCC_10883 [Glaciecola sp. HTCC2999]
          Length = 389

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 79/275 (28%), Gaps = 50/275 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +           L    +  +       A      +L     R  
Sbjct: 83  GELDRAIRIHQNLVSRDELQGTPRENALSELGRDYMLAGFLERAENSYLKLLDSDKHR-- 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                           +AQRY                 + + Y   KEW +AI    +  
Sbjct: 141 ---------------AAAQRY-----------------LFEIYQTTKEWDKAIDLSQRML 168

Query: 216 K---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
               N K+     +     ++ +     D   +     E++ + ++++   +   +  I 
Sbjct: 169 SVDSNQKDVAHQLSHFYCEKAQQFVKAADYSNAIPFLHEAIDIDEHAVRPWLMLGRIYIE 228

Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
             + +KA   L ++      W     P +      L  +  +        L    +E   
Sbjct: 229 SQEYQKAADALNQVPNRDISWFSEAVPLLEQCSEALHDDELLE-----SSLAPYWQECAT 283

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           S +   K++ + G   +A    +  +K  P    F
Sbjct: 284 SYLAKVKLSAKRGEDTEATNILLEQLKQKPTMRGF 318


>gi|237812363|ref|YP_002896814.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
           MSHR346]
 gi|237506629|gb|ACQ98947.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
           MSHR346]
          Length = 1451

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 947 LERRDDAIAA--LQRALE 962



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             R  D   A + A +A+ ++PD         +  +   ++  A++   + ++   +   +
Sbjct: 877  RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A L+ A +     + D IA+   A+E          A     +  +   +  KA  + +
Sbjct: 937  YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992

Query: 285  KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +   V  H E+A+        Y +L + +     L+RA    EI   + E+L  +  +  
Sbjct: 993  R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047

Query: 337  EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             +  + ++      A+ I     + + LA
Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076


>gi|167910819|ref|ZP_02497910.1| hypothetical protein Bpse112_10010 [Burkholderia pseudomallei 112]
 gi|254188884|ref|ZP_04895395.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|157936563|gb|EDO92233.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
           52237]
          Length = 1451

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 947 LERRDDAIAA--LQRALE 962



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             R  D   A + A +A+ ++PD         +  +   ++  A++   + ++   +   +
Sbjct: 877  RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A L+ A +     + D IA+   A+E          A     +  +   +  KA  + +
Sbjct: 937  YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992

Query: 285  KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +   V  H E+A+        Y +L + +     L+RA    EI   + E+L  +  +  
Sbjct: 993  R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047

Query: 337  EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             +  + ++      A+ I     + + LA
Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076


>gi|310825510|ref|YP_003957868.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398582|gb|ADO76041.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 392

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A E    + + P     A+  +        + + A+    K L + P+ P     + +
Sbjct: 21  AAAREFQGALAKNPQ-DASALLGMARLHLAQQEADKARPLLEKLLALDPEHPEARGFLAR 79

Query: 197 QYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLI-------ARSLENADKGDMI- 243
                ++   A+  L    KN +      +N   A+LL+       A++   A K     
Sbjct: 80  LKAEGEKDEGALDELRALAKNPEAGFIEFYNLGHALLLLPGKEAEAAQAFVQALKVAPKN 139

Query: 244 --------------ASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILEK 285
                              A++  K               A+K L+   +  KA++ L+K
Sbjct: 140 PHATTYLGVAVWKQGQLPQALKCFKYAATLAPRESLPLQLASKVLVQLGQVGKAQLALQK 199

Query: 286 IWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             +  P  PE+   +    + +      LK  +   +++ ++     +   + L  G++ 
Sbjct: 200 ALQRAPQKPELHEDFIKLCIFANKPKLALKSVIDFRQLDPKNPNGPYLQGLVMLLSGNLS 259

Query: 343 QAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           +A      A+ +AP+       L   +         + L   + A+  A  +P
Sbjct: 260 EARRTFREAVALAPQAWEPKLGLARALLIGEQKEVAEALKLLEEAVALAPTEP 312


>gi|167815662|ref|ZP_02447342.1| hypothetical protein Bpse9_10994 [Burkholderia pseudomallei 91]
 gi|226197223|ref|ZP_03792800.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225930602|gb|EEH26612.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 1451

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 947 LERRDDAIAA--LQRALE 962



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             R  D   A + A +A+ ++PD         +  +   ++  A++   + ++   +   +
Sbjct: 877  RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A L+ A +     + D IA+   A+E          A     +  +   +  KA  + +
Sbjct: 937  YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992

Query: 285  KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +   V  H E+A+        Y +L + +     L+RA    EI   + E+L  +  +  
Sbjct: 993  R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047

Query: 337  EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             +  + ++      A+ I     + + LA
Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076


>gi|167034191|ref|YP_001669422.1| cellulose synthase subunit BcsC [Pseudomonas putida GB-1]
 gi|166860679|gb|ABY99086.1| cellulose synthase operon C domain protein [Pseudomonas putida
           GB-1]
          Length = 1186

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 115/359 (32%), Gaps = 68/359 (18%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++AA+++P AR  +    QQ       L+ L    + +AE     A  +   + ++    
Sbjct: 361 ALAANDLPTARSRYQQARQQRPNDEFALLGL--ADVLMAEGNTVAAERQFLQVRRMAPDN 418

Query: 154 EFAVYSLYF------------------------------------------ESCRIGDLN 171
             AV  L                                            E+ +  D +
Sbjct: 419 GIAVRGLMRVYQAQSPDKAQAFLDSLPARQQTQFASLRRSLALARLRQQGDEALQREDWS 478

Query: 172 SAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           +A +   +A  ++PD PW+   +   ++      E   A   + Q + +         + 
Sbjct: 479 TASQVLNQAASLAPDEPWLVYQLANSLRHQGRTAEADAAFARVVQHQPHDPATRYAHGLF 538

Query: 229 LIARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           L +   +      + A    A    + +L+      M ++ +A+ L +Q +   A  +LE
Sbjct: 539 LESSDRDALALDSLGAIPQPAWTPDMHALEQRIQRRM-TLASAQQLQAQGRNADATALLE 597

Query: 285 KIW-KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
               +    P+   +   +   L E    +     R+  +     ++ + V + A+  G+
Sbjct: 598 ASLARGEASPDDLMLLADWAAALGEPGKAR-GYYQRVLAVQPGRADARLGVMESAVAEGN 656

Query: 341 IDQAHAKAM-----LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS--ALHAMPDP 392
           + QA          LA   +  +     LA +  A   +            A    PDP
Sbjct: 657 LAQARHMLGVQVPQLAADDSNAQRR---LAAVWVALGEHQQAARQ-LDRVAAQQTRPDP 711


>gi|73670453|ref|YP_306468.1| hypothetical protein Mbar_A2994 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397615|gb|AAZ71888.1| hypothetical protein Mbar_A2994 [Methanosarcina barkeri str.
           Fusaro]
          Length = 417

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 8/147 (5%)

Query: 134 RQYNIAHEKLEMMLQI-PATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            ++  A E  + +LQ  P   E  A     F +        A    + AL I P+     
Sbjct: 273 GRFEEALEIYDKILQKFPEYAEAWAGKGSIFLALDRE--EEALEAYSSALRIRPEYLEAL 330

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            +          +  ++   ++  +   +  R    LL A+    ++ G    +  +   
Sbjct: 331 TSTGSLLSRLGRYEESLKIYDKALQLVPKDPR----LLAAKGFVLSEMGKQEEALENCNR 386

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRK 278
           +L+L    + A     + L    +++ 
Sbjct: 387 ALELQPGFVPALEIKVRILSEIGRQKN 413


>gi|21244240|ref|NP_643822.1| cellulose synthase subunit C [Xanthomonas axonopodis pv. citri str.
           306]
 gi|22001534|sp|P58938|BCSC_XANAC RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|21109883|gb|AAM38358.1| cellulose synthase subunit C [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 1508

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 92/309 (29%), Gaps = 45/309 (14%)

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           V R     P  L  +   R   + +      L   AA N     K  + +     +    
Sbjct: 306 VLRARARDPEALGGLGSVRLRQQRFAEAQELLRPAAAGNG----KWRNALESARYWQQ-- 359

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L + + A A      A + +E  +Q+         +L       GD  +A+    KA
Sbjct: 360 ---LQQAETARARGDLAQARQLIEQAVQLLPNEPAGHVALGDL-QAAGDPVAAEASYRKA 415

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----ARSLEN 236
           L    D     + +V  Y        A    ++     +  +  +A+L      AR+ + 
Sbjct: 416 LARDADNAGALQGLVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARARQF 475

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            D GD +++  +   ++          +  A+      +  +A  +++            
Sbjct: 476 LDAGDAVSAQTELEAAMVERPGDAWIRLDLARLYQQAGRPDQARSVMDG----------- 524

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                               L  ++ +  E+L   + +A E G    A+         A 
Sbjct: 525 --------------------LLAVHGDQPEALHANALLAQESGDWQGAYDSLDRIPAAAR 564

Query: 357 RKEIFLLLA 365
              +  L A
Sbjct: 565 TPAMTQLRA 573


>gi|323966049|gb|EGB61489.1| cellulose synthase operon protein C [Escherichia coli M863]
 gi|327251176|gb|EGE62869.1| cellulose synthase operon protein C [Escherichia coli STEC_7v]
          Length = 1157

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 89/255 (34%), Gaps = 14/255 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D ++A+RY  + L +  
Sbjct: 357 QGDAALKANNPDRAERLFQQARSVDNTDSYAVLGLGDVAMARKDYSAAERYYQQTLRMDS 416

Query: 186 DAPWVTEAVVQQYVLAK-EWSRA-ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                   +   Y     E + A I  L+  ++ + +      +   L  ++     +G 
Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALEKQGK 476

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ PE    Y 
Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLVQQKPNDPEQVYAYG 536

Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351
             LS +   +  L     L   + N    E  + +    V + A  +    +    A + 
Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAAAML 596

Query: 352 MKIAPRKEIFLLLAQ 366
            +  P   I L LA 
Sbjct: 597 RQQPPSSRIDLTLAD 611



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y+ A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARSVDNTDSYAVLGL--GDVAMARKDYSAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALEKQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLVQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +A  +L    +  P P    ++    +     +    +      L      + +++
Sbjct: 587 GKEAEAAAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPASDNASLNTQRRVALAQAQLGDTAAAQQ 692


>gi|229178026|ref|ZP_04305398.1| hypothetical protein bcere0005_13890 [Bacillus cereus 172560W]
 gi|228605514|gb|EEK62963.1| hypothetical protein bcere0005_13890 [Bacillus cereus 172560W]
          Length = 434

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 93/287 (32%), Gaps = 67/287 (23%)

Query: 122 VYLLEVQIALAERQYNIAHEKL---EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             LL   +   +   ++A +KL   + M+   +   F +  LY      G+   A  Y  
Sbjct: 116 SLLLVADLFQMQGFDDVAEQKLLKAKEMMPDESVITFGLAELYSSK---GEEQKAITYYE 172

Query: 179 KALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKN----------------AKE 220
             L        V  A+   +       W  AI++     +                  +E
Sbjct: 173 SLLAEHKVMGGVVIALRLAETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEE 232

Query: 221 WNR-------------NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           + R               A L +  +     +G +  SY    E +K+ + S+   +  A
Sbjct: 233 YQRAIGAWQELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELA 292

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKES 324
                  K  +AE +L+K  +++P H  +     Y ++L E                 E 
Sbjct: 293 NIAAKLGKIVEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EK 334

Query: 325 VESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362
            E L+ + + A++ G        D A+AK  L M        +  + 
Sbjct: 335 YEELIAIVERAIDSGEPDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|76809563|ref|YP_333589.1| TPR repeat-containing protein [Burkholderia pseudomallei 1710b]
 gi|167738470|ref|ZP_02411244.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
           14]
 gi|217421376|ref|ZP_03452880.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
 gi|242316339|ref|ZP_04815355.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
 gi|254258508|ref|ZP_04949562.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
 gi|254297570|ref|ZP_04965023.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
 gi|76579016|gb|ABA48491.1| Tetratricopeptide repeat family [Burkholderia pseudomallei 1710b]
 gi|157807326|gb|EDO84496.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
 gi|217395118|gb|EEC35136.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
 gi|242139578|gb|EES25980.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
 gi|254217197|gb|EET06581.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
          Length = 1451

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 947 LERRDDAIAA--LQRALE 962



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154
            H+  LA +      Q     ++    LL  ++AL    ++ A  + E + +         
Sbjct: 880  HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 937

Query: 155  FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
              +        R  D  +A +   +AL+++   P      VQ Y+  +++ +A+     +
Sbjct: 938  ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 992

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +          A  +      N    D   +      +L++  ++  A       L   +
Sbjct: 993  RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 1050

Query: 275  KKRKAEVILEKI 286
            +  ++E +L + 
Sbjct: 1051 RLAESEEVLRRA 1062



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%)

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             ++A+ Y  +A+ + PD               ++   A    +  +  A + + +   L 
Sbjct: 817  PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 872

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            +AR        D   +   A  +++L  +   A +  A+  +      +A    E+    
Sbjct: 873  LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 927

Query: 290  NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
               P+    Y +L          ++ +  L+RAL L   +  ++ + V   +  L     
Sbjct: 928  EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 984

Query: 342  DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            D+A   A   +           +  +   N    D+     + AL   P
Sbjct: 985  DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 1033


>gi|170078681|ref|YP_001735319.1| TPR domain-containing protein [Synechococcus sp. PCC 7002]
 gi|169886350|gb|ACB00064.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
          Length = 318

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 83/235 (35%), Gaps = 11/235 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L E    + +   + A  + +  + +      A Y+L     + GDL SA +   + +
Sbjct: 63  AKLSEGLALIQQGNLDGAIAQFQQAIALDPLLWQAHYNLGLALGQRGDLPSAAQAFLETI 122

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P+       +    + ++ W +A T+L +            AI      L    +G+
Sbjct: 123 ALQPNFAVAYGNLGGVLIDSQNWPQAETYLRRALSLDPNL----AIAHYNLGLIYRHQGN 178

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YT 300
             A+     ++ +L  N   A+I  A+  ++ ++   A+ +++++ K      +A + Y 
Sbjct: 179 RDAAIQAWQKARELAPNFPDATIQLAELYLAGDRPEAAQPLIQELLKSQL--NLAAVHYL 236

Query: 301 HLL----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                    +    L       E +     +    +++ ++      A      A
Sbjct: 237 QGRLLTQRGDFSEALAAFRASSERDPTYANAYFAAAQLLIKNNQRAAAMPLLDYA 291


>gi|325295224|ref|YP_004281738.1| hypothetical protein Dester_1041 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065672|gb|ADY73679.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 268

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 74/184 (40%), Gaps = 13/184 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G+L+ A++Y  KA+ + P+       +   Y    E  RA  +  +   N       
Sbjct: 93  IQRGELDRAEKYLRKAIKMKPNFSEGYLNLGIVYEKRGELKRARKYYEKALSNPLYLTPE 152

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-- 282
            A L +  ++ +  +  +  +    + +LK   + I A I  AK L ++ K  +A+ I  
Sbjct: 153 VAYLRL--AMLSLRENQVEKAKEYLVRALKNNLDYIPAYIELAKILENEGKIEEAQEIYL 210

Query: 283 -LEKIWKVNPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            L  ++    +P   +A IY           L    +  ++N +S   +    K  +++ 
Sbjct: 211 RLVSLYPKVQYPYYRLALIYLKKKKIQHAKAL--LKKCIKLNPDSDIGI----KAKIKLE 264

Query: 340 SIDQ 343
            +D+
Sbjct: 265 ELDE 268


>gi|75907401|ref|YP_321697.1| hypothetical protein Ava_1178 [Anabaena variabilis ATCC 29413]
 gi|75701126|gb|ABA20802.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 280

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                     A     E +   P     F        S   GD   A     +A+ +SP+
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASL--GDNAGAITDYNEAIRLSPN 159

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                        +  + S +I   NQ  +   ++    AI    R    A +GD   + 
Sbjct: 160 YAEAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKY----AIAYNNRGNARASQGDSQGAI 215

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            D  ++++L  N   A      +  +Q  K+ A   L+K 
Sbjct: 216 SDYNQAIRLNSNFGPAYNNRGNARAAQGDKQGALEDLQKA 255


>gi|21243030|ref|NP_642612.1| tetratricopeptide repeat protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|78048049|ref|YP_364224.1| tetratricopeptide repeat protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294624735|ref|ZP_06703401.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664333|ref|ZP_06729698.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325925938|ref|ZP_08187306.1| putative N-acetylglucosaminyl transferase [Xanthomonas perforans
           91-118]
 gi|21108539|gb|AAM37148.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|78036479|emb|CAJ24170.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|292600969|gb|EFF45040.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605899|gb|EFF49185.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325543661|gb|EGD15076.1| putative N-acetylglucosaminyl transferase [Xanthomonas perforans
           91-118]
          Length = 392

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 90/303 (29%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI    + ++   +   +  +      +      G    +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGLGKTDDALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +    +     A    E+  + +P       P +   Y  +
Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                   +  A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L  +  A   +    L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|114330536|ref|YP_746758.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
 gi|114307550|gb|ABI58793.1| Tetratricopeptide TPR_2 repeat protein [Nitrosomonas eutropha C91]
          Length = 569

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 87/278 (31%), Gaps = 37/278 (13%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL  GL+S    ++  A K       Q  F +   ++    +I    ++   A +  + +
Sbjct: 288 ALAIGLLSAELDDLENAEKYFKRAL-QLGFEDADTIHFNLGRIYEISQRDAQAMDAYQKV 346

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYAT----------------KA--------LD 182
                     V   Y  + R G + +A+ Y                  +A          
Sbjct: 347 ASGDRYIPAHVRYAYLLAKRDG-VVAARHYLKTIQVSDERQRTQLLISEAQLLRDNNDFR 405

Query: 183 ISPDAPWV-------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            + D              ++    L  +    +  L +  +   +   + A    A    
Sbjct: 406 GAYDLLDAYLRKYPEQIELLYDRALMADKIGKLDVLERDLRKLIQLKPDNAHAYNALGYS 465

Query: 236 NADKGDMI-ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            A++G+ +  +     ++++L  +                  RK    ++  +     PE
Sbjct: 466 LAERGEQLPEALALVQKAIELSPDDPYILDSLGWVYYRMGDPRKGIKYIKLAFDTRSDPE 525

Query: 295 IANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
           IA  Y  LL  +     + A ++ +   ++  E+ +++
Sbjct: 526 IAAHYGELLWISGAK--QDAEKIWQTALEDHPENELLL 561



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 14/148 (9%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKSLISQNKKRKAEVILEKIWK 288
           +    D       + DA E++ L       SI     A    ++  +  K    +E++  
Sbjct: 84  AEHATDIALRARRFDDAREAIDLWATLEPNSIQAHQAAVALFVATGQLNKVRPHIERLLV 143

Query: 289 VNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           + P   +   +  L        +    LK   +L     +  E+   VS+ A        
Sbjct: 144 LEPE-TVDKAFMQLNKLLSHHPDKEAVLKLIRQLAASYPDLPEAHFAVSQAAWVARQFKS 202

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           A      A+K+ P  E    +A + Q  
Sbjct: 203 ASEAMSQALKLRPEWE----MAAVHQGQ 226


>gi|332664957|ref|YP_004447745.1| hypothetical protein Halhy_3009 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333771|gb|AEE50872.1| Tetratricopeptide TPR_2 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 563

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 81/252 (32%), Gaps = 24/252 (9%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL   ++++ A N  +A K  +          E L+  +E        + + A E  + +
Sbjct: 8   ALLCAVVTLGAQNETVANKEVTR---------EALI--IEAGKEKMLGRLDKAKELYKQL 56

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L+     E A Y L            A  +A KA  ++P   W             ++  
Sbjct: 57  LKEYPNNELAAYELARILMVQNQPEEAIIWANKAAAVNPSNVWYAILKADAQQAMGQYKD 116

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A      +         N         ++  +    +  Y D    + + +  +      
Sbjct: 117 AAGVYE-QLTRQYPTQSNYFYKWAFYLVKANELNPALRVYDDLERRIGMNETLV---RLK 172

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEI 320
                +Q   +KA   L+++   +P      H  +A  YT +  E    +     ++  +
Sbjct: 173 HGLYHAQGDDKKAARELQRLADAHPNNIDYKH-NLAEFYTEI-GEKEQAR-ATYRKILSL 229

Query: 321 NKESVESLVIVS 332
           +    ++ + ++
Sbjct: 230 DPNDAKANLALA 241



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 11/222 (4%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +  +  E   + +   I   + +   A EK  + L I  T      +L+     +GD+ +
Sbjct: 302 EQLYPKEAKPFAISASILNKQGKKAEALEKARIALNIDDTDFAQWETLFLGLETLGDMPA 361

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
             +    ALD+ P+ P V        +     S A   +NQ    + ++   R  LL   
Sbjct: 362 LLKACENALDVFPNKPEVYAYAATAELAMHNLSNAQDLINQALPISAKFPVVRQHLLSLL 421

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL---ISQNKKRKAEVILEKIWKV 289
           ++    + +   +  +  E+LKL  NS  A+  A +SL   +      +A  + +K  + 
Sbjct: 422 AMVQTQQNNPSGADQNFAEALKLNANS--ATTLAWQSLSFSLRPTGAAQALQLAQKALQT 479

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALR-----LEEINKESVE 326
            P   +A IY    ++     L  A       L   N   +E
Sbjct: 480 EPQSRLA-IYALARAQFRNSNLAEAKNKIESLLPSANPLYLE 520


>gi|332706175|ref|ZP_08426244.1| hypothetical protein LYNGBM3L_15650 [Lyngbya majuscula 3L]
 gi|332355012|gb|EGJ34483.1| hypothetical protein LYNGBM3L_15650 [Lyngbya majuscula 3L]
          Length = 372

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 76/225 (33%), Gaps = 11/225 (4%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                   ++      A + L     R  D   A     K L+I PD   V + +   ++
Sbjct: 135 ATAYRRATRLNRDNINAYFGLAITLLRQKDYQRAIETYEKILEIEPDNLTVYQLIGAAWL 194

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             +    AI    +  + A    R +  L  A  +     GD +A      +++KL   +
Sbjct: 195 EQENSEEAIKVFQKAAEIAPNETRIQLSLGTAWLIH----GDEMAGLAAFEKAVKLAPRN 250

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTH---LLSENTVGKLKRA 314
               +   + L S+    KA     +    +  P++  A  Y     L  E  V  +   
Sbjct: 251 PEIHLQIGQILESRGNLSKALKAFRRA--ASAKPDLVEAQEYIGKILLAQEQYVPAVVTY 308

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            RL E+  ++ ++   +     +   + +A      A+++   + 
Sbjct: 309 RRLIELAPKNAQAHYNLGVALKKRSRVTEALTAIEKALELYQSQR 353



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 84/248 (33%), Gaps = 16/248 (6%)

Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQ 174
           N  L  LL + +  +    Y  A    E   ++     + F+    Y ++  +G    A 
Sbjct: 44  NPQLNDLLHQARELVDAGDYQGAVAVYEEAAKLEQGNPKIFSGIG-YLQA-SLGKFQEAA 101

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               KA+ + P+ P    A+      A +            + A   NR+        ++
Sbjct: 102 AAYKKAIALQPENPNFHYALGYSLANAGD----NAGAATAYRRATRLNRDNINAYFGLAI 157

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP- 293
               + D   +     + L++  +++        + + Q    +A  + +K  ++ P+  
Sbjct: 158 TLLRQKDYQRAIETYEKILEIEPDNLTVYQLIGAAWLEQENSEEAIKVFQKAAEIAPNET 217

Query: 294 ----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                +   +  L+  + +  L    +  ++   + E  + + +I    G++ +A     
Sbjct: 218 RIQLSLGTAW--LIHGDEMAGLAAFEKAVKLAPRNPEIHLQIGQILESRGNLSKALKAFR 275

Query: 350 LAMKIAPR 357
            A    P 
Sbjct: 276 RAASAKPD 283



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 82/236 (34%), Gaps = 13/236 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD   A     +A  +    P +   +        ++  A     +      E 
Sbjct: 55  RELVDAGDYQGAVAVYEEAAKLEQGNPKIFSGIGYLQASLGKFQEAAAAYKKAIALQPEN 114

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                    A     A+ GD   +      + +L  ++I A    A +L+ Q   ++A  
Sbjct: 115 PN----FHYALGYSLANAGDNAGAATAYRRATRLNRDNINAYFGLAITLLRQKDYQRAIE 170

Query: 282 ILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             EKI ++   P+   +Y       L  EN+   +K   +  EI        + +    L
Sbjct: 171 TYEKILEIE--PDNLTVYQLIGAAWLEQENSEEAIKVFQKAAEIAPNETRIQLSLGTAWL 228

Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             G      A    A+K+APR  EI L + QI ++   N  K L   + A  A PD
Sbjct: 229 IHGDEMAGLAAFEKAVKLAPRNPEIHLQIGQILES-RGNLSKALKAFRRAASAKPD 283


>gi|255076833|ref|XP_002502083.1| predicted protein [Micromonas sp. RCC299]
 gi|226517348|gb|ACO63341.1| predicted protein [Micromonas sp. RCC299]
          Length = 662

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 97/285 (34%), Gaps = 33/285 (11%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLE---VQIALAERQYNIAHEKLE-MMLQIPATREF 155
             +AR    Y     T   E  V  L     Q     ++   A    +  +  +P  +  
Sbjct: 238 GDVARCRAVYEDAVETMEREVDVDQLYVKFAQFEELVKEPERARAIYKYALDNLPKEKAQ 297

Query: 156 AVYSLYFESCRI-GDLNS--------AQRYATKALDISPDA--PWVTEAVVQQYVLAKEW 204
            VY  +    +  GD  +         +    + +  +P +   W     +++     + 
Sbjct: 298 EVYKAFTTFEKQYGDRGAIEDVIVGKQRVKYEEEVRANPTSYDSWFDYTRMEEQ--HGDI 355

Query: 205 SRAITFLNQKK-----KNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCD- 257
            +A     +       +N K + +    L I  +L E  D  D   +     E LKL   
Sbjct: 356 EKAREVYERAIANVPPQNEKRYWKRYIFLWINYALFEEIDAQDPERTREVYRECLKLIPH 415

Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              +     I A++  I Q +   A  IL     ++P  +I   Y  +  E  +G + R 
Sbjct: 416 KSFSFSKVWIMASQFEIRQKRLDAARKILGMAIGMHPKEKIFKTYIDM--EMQLGNIDRC 473

Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             L     E+N  +  S V  +++   +   ++A A   +A+ + 
Sbjct: 474 RTLYEKALELNPFNCSSWVKFAELEKSLAETERARAIFEIAVGMD 518


>gi|46198571|ref|YP_004238.1| hypothetical protein TTC0263 [Thermus thermophilus HB27]
 gi|46196193|gb|AAS80611.1| hypothetical conserved protein [Thermus thermophilus HB27]
          Length = 355

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 89/242 (36%), Gaps = 17/242 (7%)

Query: 160 LYFESCRI----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           LY ++       G L  A      A  ++P    +       Y L  E  +A   L Q  
Sbjct: 110 LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQAL 169

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                     A+  +  S+   D+   +A Y  A+E      +     +  A +L+ + K
Sbjct: 170 ALEDTPEIRSALAELYLSMGRLDEA--LAQYAKALEQAPKDLDLR---VRYASALLLKGK 224

Query: 276 KRKAEVILEKIWKVNPHPE-----IANIYTHL-LSENTVGKLKRALRLEEINKESVESLV 329
             +A  +LE+  ++ P        +   Y  L  ++     L+ A+ L  +      +  
Sbjct: 225 AEEAARVLEEGHRIKPLNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLR--FPAAYY 282

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
            + ++ L +G   +A ++  +A+++ P++  +     +      + +   Y  Q AL   
Sbjct: 283 YLGQVYLALGDYPKAKSRLTVAVRLEPKRAEYRYSLCLANEKLGDKEGARYQCQEALKLK 342

Query: 390 PD 391
           PD
Sbjct: 343 PD 344



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 69/206 (33%), Gaps = 9/206 (4%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +   +G  ++A     +AL  +P  P     + +  +     + A+           
Sbjct: 35  LGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTP 94

Query: 220 EW-----NRNRAILLIARSLENADKGD--MIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            +       + A + + R  E+ ++G   +  +     ++ ++        +        
Sbjct: 95  RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL 154

Query: 273 QNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             ++ KAE  L++   +   PEI  A    +L        L +  +  E   + ++  V 
Sbjct: 155 LGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVR 214

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
            +   L  G  ++A        +I P
Sbjct: 215 YASALLLKGKAEEAARVLEEGHRIKP 240


>gi|39996532|ref|NP_952483.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39983413|gb|AAR34806.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|298505548|gb|ADI84271.1| TPR domain protein [Geobacter sulfurreducens KN400]
          Length = 573

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 75/221 (33%), Gaps = 20/221 (9%)

Query: 149 IPATREFAVYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            P        +LY  +        GD++ A      A++  P + ++  AV + Y+    
Sbjct: 36  KPTVDIAGSRALYIFARARLQLLEGDVDGALTLLNGAIEADPGSAYLHTAVAEIYMKTGR 95

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A+       +    + + R +     +    D+ D +     AIE   L  +   A 
Sbjct: 96  AEDALKACENAIRLDPSYRQARLLAGAILASLKRDR-DAVPHLEKAIE---LDPSREEAY 151

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
           I  A S +   +  KA   L+ + KV P   +   Y          ++K         K+
Sbjct: 152 IHLAVSYLKLFEYEKAVNTLKSLVKVKPESSLGYYYL----GKAYDQMKLQKEAANYYKK 207

Query: 324 SVESLVIVSKIALE-------MGSIDQAHAKAMLAMKIAPR 357
           ++E      +  +E       MG  D+A A     + I P 
Sbjct: 208 AIELKPDFEQAIIELGIVQEGMGLHDEAVATYKSLLDINPY 248



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 56/159 (35%), Gaps = 5/159 (3%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+       K   +   +RA+ + AR+     +GD+  +      +++    S      
Sbjct: 26  GALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTLLNGAIEADPGSAYLHTA 85

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
            A+  +   +   A    E   +++P       +A      L  +    +    +  E++
Sbjct: 86  VAEIYMKTGRAEDALKACENAIRLDPSYRQARLLAGAILASLKRD-RDAVPHLEKAIELD 144

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
               E+ + ++   L++   ++A       +K+ P   +
Sbjct: 145 PSREEAYIHLAVSYLKLFEYEKAVNTLKSLVKVKPESSL 183


>gi|289665790|ref|ZP_06487371.1| tetratricopeptide repeat protein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289671203|ref|ZP_06492278.1| tetratricopeptide repeat protein [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 392

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI    + ++   +   +  +      +  N   G    +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRNRGLGKTDDALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +    +     A    E+  + +P       P + + Y  +
Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMSAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                   +  A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L  +  A   +    L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|312220618|emb|CBY00559.1| hypothetical protein [Leptosphaeria maculans]
          Length = 704

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 28/249 (11%)

Query: 88  LYTGLMSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-M 145
           L  G   +   N   L    +  +      + +    +L  +I  A+ + + A +     
Sbjct: 351 LMRGEAHLRMGNPNALGEAQNVAMGLLRYNNQDPDALVLRGRILYAQGENDKAIQHFRQA 410

Query: 146 MLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +   P  ++  V +L   +            +                        A  +
Sbjct: 411 LSCDPDFKDA-VRNLRMVQKLERMKQEGNAAF-----------------------KAGRY 446

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             AI   +Q            + +L  R+L +  +    A+  D   +L+L  N   A  
Sbjct: 447 QEAIDTYSQALDVDPSNRNTNSKILQNRALCHTRQKSWKAAIADCDRALELDPNYTKARK 506

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
             AK+L       +A   L+ I + NP  P IA        E    K K   ++  ++K+
Sbjct: 507 TRAKALGESGNWEEAVRDLKAIQEANPSEPGIAKEIREAEMELKKSKRKDYYKILGLSKD 566

Query: 324 SVESLVIVS 332
           + E+ +  +
Sbjct: 567 ATETEIKKA 575


>gi|119187631|ref|XP_001244422.1| hypothetical protein CIMG_03863 [Coccidioides immitis RS]
          Length = 729

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 16/166 (9%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------E 192
           A   L    Q P          Y +    GD   A ++  +AL + PD+          +
Sbjct: 417 AMSLLRENSQDPDALFLRGRLFYLQ----GDNEQAIKHFKRALSLDPDSTQTVKYLRMVQ 472

Query: 193 AVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            +++          A+ +  AI       +         + LL  R+  + +  +   + 
Sbjct: 473 KLLRHKDEGNAAFKARRYREAIKLYTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAI 532

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            D  ++L+L      A    AK+        KA   L+ I + NPH
Sbjct: 533 EDCTKALELDPTYSKAKRVRAKAYGGTGDWEKALNELKSIAESNPH 578


>gi|95928392|ref|ZP_01311140.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95135663|gb|EAT17314.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 884

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 105/356 (29%), Gaps = 48/356 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++S+   +I  A++    + Q   F        L   I   +  Y  A   L   L+  
Sbjct: 236 GMLSLDMGDIVGAQRYADALKQN--FPKHPAGKRLNGMILYVQGDYKAAAVALRESLKG- 292

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                  Y L     R+     A     +ALD+ P+       +    +  K     I  
Sbjct: 293 MADLAGYYFLGLTEFRLKHYELALNQFQQALDLQPNHVQARVMLGMTLLQQKRIDDCIYQ 352

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           + Q  +   +      +L  A       KGD   +      ++ L        +      
Sbjct: 353 VTQVLQEHDDLAIVHNVLGTAY----LSKGDFDLATRHFDRAIALDPLLADPHLKKGLLN 408

Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYT-------------HLLSENTVGKL- 311
           +SQ   +KAE  LEK  +V P        +A++Y                +  +    L 
Sbjct: 409 LSQQNSQKAEFELEKALEVAPESLKTRFLLASLYLKQENYQGVIDLLQESVGSSEQDALL 468

Query: 312 ---KRALRLEEIN---------------KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                A  L +                    +     ++   L     ++A  +    ++
Sbjct: 469 YNYMAAAYLAQKQDEEGLAALKKAKAIKPNYLAPYFNLANYYLIHQQREEALEEYRAVLE 528

Query: 354 IAPR-KEIFLLLAQIEQANSHNTDK-ILYWTQSALHAMPDPLWISDDGYLSSVWLP 407
           +AP      + +A +E+   +N      Y      +      +++  GY      P
Sbjct: 529 VAPDNLRALISMASLEEVGGNNAAAEAGYERARKTNEPRG--YMALAGYFQRSSAP 582



 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 82/281 (29%), Gaps = 44/281 (15%)

Query: 129 IALAERQYNIAHEKLEM------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
             L++  +++A    +       +L  P  +      L   S +      A+    KAL+
Sbjct: 373 AYLSKGDFDLATRHFDRAIALDPLLADPHLK----KGLLNLSQQN--SQKAEFELEKALE 426

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLE--- 235
           ++P++      +   Y+  + +   I  L +      ++A  +N   A  L  +  E   
Sbjct: 427 VAPESLKTRFLLASLYLKQENYQGVIDLLQESVGSSEQDALLYNYMAAAYLAQKQDEEGL 486

Query: 236 -----------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                                           +  +    L++  +++ A I  A     
Sbjct: 487 AALKKAKAIKPNYLAPYFNLANYYLIHQQREEALEEYRAVLEVAPDNLRALISMASLEEV 546

Query: 273 QNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
                 AE   E+  K N P   +A       S       +        + ++   L   
Sbjct: 547 GGNNAAAEAGYERARKTNEPRGYMALAGYFQRSSAPQKSAQVVEDAYHAHPQNPTILKAR 606

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQAN 371
            ++ LE      A         ++P   +  L A  IE   
Sbjct: 607 GRLKLEQKDFPAAIETFKALEAVSPTAGMPFLAAAWIEAGE 647



 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 92/280 (32%), Gaps = 25/280 (8%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           S    F  +   Y +   +   + + +      + ++ I      A Y     S  +GD+
Sbjct: 186 SALKKFPQQEKFYFMLASLKARQGRMDETLNAYQQVIAIDPGNIIARYWAGMLSLDMGDI 245

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             AQRYA       P  P           +  ++  A   L +  K   +      + L 
Sbjct: 246 VGAQRYADALKQNFPKHPAGKRLNGMILYVQGDYKAAAVALRESLKGMADLAGYYFLGLT 305

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR----KAEVILEKI 286
              L++ +      + +   ++L L  N + A +    +L+ Q +      +   +L++ 
Sbjct: 306 EFRLKHYE-----LALNQFQQALDLQPNHVQARVMLGMTLLQQKRIDDCIYQVTQVLQE- 359

Query: 287 WKVNPHPEIA-------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                H ++A         Y      +   +     R   ++    +  +    + L   
Sbjct: 360 -----HDDLAIVHNVLGTAYLSKGDFDLATR--HFDRAIALDPLLADPHLKKGLLNLSQQ 412

Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKI 378
           +  +A  +   A+++AP   +   LLA +     +    I
Sbjct: 413 NSQKAEFELEKALEVAPESLKTRFLLASLYLKQENYQGVI 452


>gi|325922082|ref|ZP_08183876.1| putative N-acetylglucosaminyl transferase [Xanthomonas gardneri
           ATCC 19865]
 gi|325547419|gb|EGD18479.1| putative N-acetylglucosaminyl transferase [Xanthomonas gardneri
           ATCC 19865]
          Length = 392

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI    + ++   +   +  +      +           +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGSSKTDEALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +    +     A    E+  + +P       P +   Y  +
Sbjct: 208 VARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                   +  A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L  +  A   +    L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|313886421|ref|ZP_07820141.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924137|gb|EFR34926.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 659

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 20/195 (10%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A     A      ++Q+H    E   Y L  +IAL  +    A  ++   L I +    
Sbjct: 142 GAEQYERADSAALALTQRH--PKEARGYFLAAEIALRRQDTVAAEGRIAEGLAIDSLSAA 199

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAI 208
               L   +   GD   A RY  K+++  P               + +     +++++A+
Sbjct: 200 PYRMLSTIAYLRGDYEGALRYHDKSIEQEPGQASDYINRGLTRYKLKEYRGAMEDYNQAL 259

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                          + A+    R+L   + GD+  +  D +E ++L   ++ A    A 
Sbjct: 260 LL-----------TPHDAVARHNRALLRIEVGDLQGAREDLLEVVRLQPTNLTAHFNLAL 308

Query: 269 SLISQNKKRKAEVIL 283
                 + R+A   L
Sbjct: 309 VQTQTGQYREAIETL 323


>gi|330873389|gb|EGH07538.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 1305

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 72/231 (31%), Gaps = 51/231 (22%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221
           + G L++AQ    + L      P     ++     + +   A+  L+     ++    + 
Sbjct: 399 QAGQLDAAQAGYRQVLATRRGNPQAIRGLINVLAQSGQADEALRLLDTLSPGEQAKLGDS 458

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R +A+     +     +GD+ A+     +++K   +++      A+  +  ++  KA  
Sbjct: 459 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 518

Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302
           +++++ K  P                                   P++  +   +     
Sbjct: 519 LIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFVRIPVDQRTPDMKALADEITMTVQ 578

Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                           L    RL+ +   S E  + ++   ++ G   +  
Sbjct: 579 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGEPARGR 629


>gi|218264397|ref|ZP_03478254.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222035|gb|EEC94685.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii
           DSM 18315]
          Length = 999

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 23/181 (12%)

Query: 122 VYLLE---VQIALAE---RQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNS 172
              LE    + A  E     Y  A E  + +    + P  ++ A   +   + + G    
Sbjct: 797 TKFLEESVARTAEIEYLGNDYPAALESFKRLQIVAENPENKQAARLGIMRCALQTGQQKD 856

Query: 173 AQRYATKAL---DISPDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-I 227
           A   A + L    +SP+          + Y+  K+ ++A+  L +  K+ +  +   A  
Sbjct: 857 ALLAADELLKEPKLSPELEAEARYVRAKAYIDQKQANKALADLKELSKDTRTVHGAEAKY 916

Query: 228 LLIARSLENADKGDMIASYHDAIESLK-----LCDNSIMASICAAKSLISQNKKRKAEVI 282
           LL     +  D  +      + IE+       L    I      A   I Q    +A   
Sbjct: 917 LLAQLYYDTNDDKNAEKVLMNFIENGTPHQYWLARGFI----LLADIYIRQGDDFQARQY 972

Query: 283 L 283
           L
Sbjct: 973 L 973


>gi|198284469|ref|YP_002220790.1| tetratricopeptide repeat-containing protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198248990|gb|ACH84583.1| Tetratricopeptide TPR_2 repeat protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 553

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 110/391 (28%), Gaps = 39/391 (9%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYA 177
           E L YLL  + A  +RQ  +A    +   ++             ++    GD   A + A
Sbjct: 33  EQLYYLLVAEFATVQRQPQLAIPAWQKAAKLAPEPNVLRR--ATQAIARFGDFQDALQLA 90

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +    +P +    +      +   +  +A+  L        +  +    + +  +    
Sbjct: 91  RRWRQAAPGSAEADQFEAALLLTTGQDEQALQLLQATLARFPDDPK----VTLQFAELLV 146

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292
             G    +             S  A     +  + + +   A   LEK   + P      
Sbjct: 147 THGRSGEARRLLSALADKDPKSAAAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAA 206

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +A     +        L+        + E+  +   ++ + L+MG + QA+       
Sbjct: 207 ISLAEALQAVQG--PAAALRSIQSFTASHPEATLARQYLAALYLQMGGLTQAYRLYQDMA 264

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYL---SSVWLPL 408
           +  P     LL   +   +  +  +       A + A   P+ +   G L      W   
Sbjct: 265 RQNPDDPDILLSLGLMDIDRKDWKRAESVLLRARNLAPQSPVPVYYLGRLYEAQDRWA-- 322

Query: 409 SPISKTLCYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
                     +W     S P Y + E  +  +E      D             P   ++ 
Sbjct: 323 -------EALQWYQRIHSGPLYPAVELRSARVEYLLGHHDKAIDKLRALAAAHPQDAQIP 375

Query: 468 SFEDSTIHPL-----------DPHIRQPDDP 487
             E   +              D   R P+ P
Sbjct: 376 LLEAGLLQDSGHLPQALQVINDALQRMPEQP 406



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 90/301 (29%), Gaps = 44/301 (14%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +       A ++      +  F ++  V L   ++ +   +   A   L  +        
Sbjct: 112 LTTGQDEQALQLLQATLAR--FPDDPKVTLQFAELLVTHGRSGEARRLLSALADKDPKSA 169

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A Y+L            A  +  KAL I PD      ++ +     +  + A+  +   
Sbjct: 170 AAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAAISLAEALQAVQGPAAALRSIQSF 229

Query: 215 KKNAKEWNRNRAIL------------------------------LIARSLENADKGDMIA 244
             +  E    R  L                              L++  L + D+ D   
Sbjct: 230 TASHPEATLARQYLAALYLQMGGLTQAYRLYQDMARQNPDDPDILLSLGLMDIDRKDWKR 289

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-------KVNPHPEIAN 297
           +    + +  L   S +      +   +Q++  +A       W        + P  E+ +
Sbjct: 290 AESVLLRARNLAPQSPVPVYYLGRLYEAQDRWAEALQ-----WYQRIHSGPLYPAVELRS 344

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                L  +    + +   L   + +  +  ++ + +  + G + QA      A++  P 
Sbjct: 345 ARVEYLLGHHDKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPE 404

Query: 358 K 358
           +
Sbjct: 405 Q 405



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 76/275 (27%), Gaps = 14/275 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L             A+   + M +             L        D   A+    +A +
Sbjct: 243 LAALYLQMGG-LTQAYRLYQDMARQNPDDPDILLSLGLMD--IDRKDWKRAESVLLRARN 299

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P +P     + + Y     W+ A+    Q+  +   +      + +  +      G  
Sbjct: 300 LAPQSPVPVYYLGRLYEAQDRWAEALQ-WYQRIHSGPLYP----AVELRSARVEYLLGHH 354

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301
             +                  +  A  L       +A  ++    +  P  P +      
Sbjct: 355 DKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPEQPSLWYAQGA 414

Query: 302 LLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAPRK 358
           +  +  +     K    +  +     ++   +    +E    + +A      A+ ++P  
Sbjct: 415 IYEQLKDYPAMEKAMRTVIHLAPNHAQAYNFIGYSLVERHSDLAEAQKLLTKALSLSPDN 474

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
              L           + D+ L + Q A  A+PD  
Sbjct: 475 PEILDSVGWLYHARGDNDRALGYLQRAHAALPDEA 509


>gi|171320227|ref|ZP_02909285.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
 gi|171094516|gb|EDT39572.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
          Length = 754

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 73/259 (28%), Gaps = 30/259 (11%)

Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +++ A    E + +        T    +      +C++G   +      +A+ +  D 
Sbjct: 18  AGRFDDARVLYEAIRRDEPEQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            ++   +            AI    +    A ++    A           D GD  A+  
Sbjct: 73  VYLNN-LGNMLRAHGRLDDAIGAYRRAIALAPDY----AEAHSNLGNALRDAGDADAAML 127

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---- 303
              ++L L  +   A      +L  + +   A    EK   ++P       Y        
Sbjct: 128 SCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP------GYAQARFNQG 181

Query: 304 -----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                       +        +  +   +   +  +  E   ++ A      A +     
Sbjct: 182 NVLRAQGRPDEAIACYRHTIALQPDLHAAHHALGALLFERDDLEAAIESLTRAAESGEAD 241

Query: 359 EIFLLLAQIEQANSHNTDK 377
            +F L A +E+A   +   
Sbjct: 242 CLFHLAAALERAGDLDGTV 260


>gi|60682719|ref|YP_212863.1| TPR repeat-containing protein [Bacteroides fragilis NCTC 9343]
 gi|60494153|emb|CAH08945.1| putative TPR repeat domain exported protein [Bacteroides fragilis
           NCTC 9343]
 gi|301164197|emb|CBW23755.1| putative TPR repeat domain exported protein [Bacteroides fragilis
           638R]
          Length = 289

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 8/167 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           + L    I L +   + A+    ++M +    T    + + Y    R  D   A+    +
Sbjct: 111 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 168

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L+I P        +        ++  A+  LNQ      E     A+L +AR+    D 
Sbjct: 169 LLEIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPE----DAVLYVARADVERDM 224

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +  D  E+++L  +SI A +      + Q KK  A+   EK 
Sbjct: 225 KHDDLALVDLDEAIRLAPDSIDAYLLRGDIYLDQKKKSLAKADFEKA 271



 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 16/194 (8%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  K  +  N + A+L     L     G    +      +L +   ++   +  
Sbjct: 57  AEDLLKQALK-LEPKNAHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILLNR 115

Query: 267 AKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLE 318
           A   + Q  + KA         + +K  +      +   Y + L  +    +L    RL 
Sbjct: 116 AAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQRLL 170

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377
           EI+ ++    + ++ +  +     +A       +   P    +++  A +E+   H+   
Sbjct: 171 EIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPEDAVLYVARADVERDMKHDDLA 230

Query: 378 ILYWTQSALHAMPD 391
           ++     A+   PD
Sbjct: 231 LVD-LDEAIRLAPD 243


>gi|297259331|ref|XP_001113447.2| PREDICTED: pre-mRNA-processing factor 6 [Macaca mulatta]
          Length = 824

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 462 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 519

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 520 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 579

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 580 LCEEALRHYEDFPKLWMMKGQIEEQKEMMENAREAYNQGLKKCPHSTPLWLLLSRLEEKI 639

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 640 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 697

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 698 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 755

Query: 391 D 391
           D
Sbjct: 756 D 756



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 24/176 (13%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---------AKSLISQN----KKR 277
            ++        +  S    +E+ +L       ++ A          +  I         R
Sbjct: 211 GQARNTLMDMRLSQSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIR 270

Query: 278 KAEVILEKIWKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             + +L K  +  P+   +      L   E+    L RA    E    SVE  + ++++ 
Sbjct: 271 AKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELXLALARL- 326

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               + + A      A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 327 ---ETYENARKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 378


>gi|220918656|ref|YP_002493960.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956510|gb|ACL66894.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 637

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 71/209 (33%), Gaps = 11/209 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+GD + A+R   +AL   P +  V  A+          + A+  L           R R
Sbjct: 150 RLGDRDGAERDLRRALAQRPSSGAVRIALGTLLRRRGAIAEAVALLEPAAAAGSNEERAR 209

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVIL 283
           A++ +  +   A +     +     +++      +   +  A++ +        +A  +L
Sbjct: 210 ALVALGAAHLAAGR--RAEAGRAFEQAVLYAPARVEIRLGVARAWLGGDAGDAERALSVL 267

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +   + P     H  +        + +  G  +   R   ++  +  +   V ++AL  
Sbjct: 268 ARAADLAPDVPAVHAALGRA--RERTGDDAGAAEAYERALRLDPSNRYARRRVLRLALAA 325

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               +A  +A   +   P       LA +
Sbjct: 326 RDFARARHEADRLVADGPEVAEHHFLAAL 354


>gi|108761603|ref|YP_629581.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108465483|gb|ABF90668.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 639

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 82/275 (29%), Gaps = 14/275 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL++       +A  +  Y         +  +     +      + + A E     L++
Sbjct: 116 RGLLARVLDERDVA--ISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKL 173

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            A    A  +L       G    A+    +A             +    +   +   AI 
Sbjct: 174 DAKLNVARVNLGKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIA 233

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +    A       A       +   +KGD   +    ++++        A      +
Sbjct: 234 EYQRTLAAAP----KHASAHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLA 289

Query: 270 LISQNKKRKAEVILEKIWKVNPHP------EIANIYT-HLLSENTVGKLKRA-LRLEEIN 321
                   +A    E+   + P        ++ ++Y      +  V   K A  +  E  
Sbjct: 290 YYQLGDFARATKAFERAVVLEPQRSSGPYTQLGHLYLTQGKKKQAVEAFKTAIAKSAEDG 349

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           K++ E+   +++  L +G  D+A A    A+   P
Sbjct: 350 KKTTEAYQGLARAWLSLGKADEAVATLKTAVGAFP 384



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 77/265 (29%), Gaps = 17/265 (6%)

Query: 105 KMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSL 160
           K      ++       L+   L   +      +   A   L+  +      +   A   L
Sbjct: 59  KKAVAPLKKLVAQEPDLIPPKLALARALRLSGEPEQARTVLDTAIAAFPEESTLRAERGL 118

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +  + + + A      A++++P    +   + +    A     AI    +  K   +
Sbjct: 119 L--ARVLDERDVAISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKLDAK 176

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            N  R  L        A+KG    +     E+ +       A       L+ +N    A 
Sbjct: 177 LNVARVNL----GKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAI 232

Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
              ++     P     H  +   +      +        L+    + +  E+   +    
Sbjct: 233 AEYQRTLAAAPKHASAHNNMGVAFNE--KGDPRKATDAFLKAIAADPKFAEAHFNLGLAY 290

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEI 360
            ++G   +A      A+ + P++  
Sbjct: 291 YQLGDFARATKAFERAVVLEPQRSS 315



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 74/282 (26%), Gaps = 32/282 (11%)

Query: 98  HNIPLARKMHSYVS----QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE----MMLQI 149
            +   A K          Q+ +     L +L      L + +   A E  +       + 
Sbjct: 294 GDFARATKAFERAVVLEPQRSSGPYTQLGHL-----YLTQGKKKQAVEAFKTAIAKSAED 348

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A   L      +G  + A      A+   P       A  +      +   AI 
Sbjct: 349 GKKTTEAYQGLARAWLSLGKADEAVATLKTAVGAFPKDASARAAYGEALRAKGDLDGAIA 408

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMI-ASYHDAIESLK------LCDNSIMA 262
              +  K A       A+  +        K   +  +  D   + +            M 
Sbjct: 409 EYEEGVKLAPTPENRLALADVYAQKRVGAKAQPLYKALLDEDPANRAAKLALADLLLAMG 468

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEIN 321
              AA+ L+      +A+              +A +   H         +     +   +
Sbjct: 469 DYVAAEGLLKPKDGEEADTA-----------ALARLGIVHSRRGRPDLAVSELEAVVAKD 517

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              +E+   +  I L  G   +A       + + PR  + LL
Sbjct: 518 PAQLEARAELGFIYLRGGDGAKARKVLTSVLSVDPRHSLGLL 559


>gi|312183651|gb|ADQ42395.1| conserved hypothetical protein [Methanosaeta harundinacea]
          Length = 673

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 101/299 (33%), Gaps = 48/299 (16%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVY 123
           L   + +   LH+            G+++ A  +I  AR+++    +  Q       +  
Sbjct: 283 LGDKSAVSRSLHQ-----------LGMLAQATGDITEARRLYGESLKILQDLGDKSGVAR 331

Query: 124 LLE--VQIALAERQYNIAHEKLEMMLQ------IPATREFAVYSLYFESCRIGDLNSAQR 175
            L     +A A      A    E  L+        +T   ++++L   +   GD+  A R
Sbjct: 332 SLHQLGMLAQATGDIVEARRFYEESLKISEELGDKSTISKSLHNLGAIAQATGDIVEAGR 391

Query: 176 YATKALDISPDAPWVTEAVVQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILL 229
           +  + L I+ +    +      + L        + S A     +  K  +E      I +
Sbjct: 392 FYNEGLKIASELGDKSGIASSLHQLGMLAYDTGDISEARRLYGESLKIKRELGDKSGIAI 451

Query: 230 IARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                    +  GD+  +     ESLK+ ++    S   A+SL       +A        
Sbjct: 452 SLHECGILAQRSGDLTEANRLFNESLKISEDLGDMSGI-ARSLHQLGVLAQARG------ 504

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                 +IA  Y HL  ++    LK    L ++      SL  +  +A   G I +A  
Sbjct: 505 ------DIAEAY-HLYGDS----LKILQDLGDM-SGISRSLHQLGLLAQLSGDIGEAKR 551



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 76/208 (36%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMM 146
           G+++  + ++  A ++ +   +  +       +   L     +A A      A+      
Sbjct: 457 GILAQRSGDLTEANRLFNESLKISEDLGDMSGIARSLHQLGVLAQARGDIAEAYHLYGDS 516

Query: 147 LQI--PATREFAV-YSLYFE---SCRIGDLNSAQRYATKALDISPDAPWVTEAV-----V 195
           L+I         +  SL+     +   GD+  A+R   ++L IS +    +  +     +
Sbjct: 517 LKILQDLGDMSGISRSLHQLGLLAQLSGDIGEAKRLYGESLKISKELGDKSTFLKSLFNL 576

Query: 196 QQYVL-AKEWSRAITFLNQKKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIES 252
                 + E  +A++      K A++ +     A  L   +L   ++G++  +     E+
Sbjct: 577 GVLAQNSGELKKALSLYGDSLKIAQDLDDKTGIAFALAQSALLEEEEGNLEQALDLIREA 636

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAE 280
             L       +   A+ +  + +K+ A 
Sbjct: 637 EALFMKLESPTAENARYVRERLEKKIAV 664


>gi|237746995|ref|ZP_04577475.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS]
 gi|229378346|gb|EEO28437.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS]
          Length = 391

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 15/174 (8%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L  P      R  A Y L  +  + G L+ A+    + L  +P +  
Sbjct: 84  GETERAIRMHQNLLLRPDLPPEQRMQAQYELGQDFLKAGLLDRAEEVFQE-LTETPYSIQ 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248
              A+++ +   KEW +AI      + +     N+  A      + +         +   
Sbjct: 143 ARRALLEIFQREKEWEQAIDAAKALQNSGTGSRNKQIAQFYCELAEDELVNTHPEKALPL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIAN 297
              ++ +   S+ A+I    +L++  K  +A       W+       PH  +A 
Sbjct: 203 LETAISIDRMSVRATILTGDALMALGKPEEAL----TAWRRVEKQSMPHTVLAA 252


>gi|296447238|ref|ZP_06889168.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
 gi|296255297|gb|EFH02394.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
          Length = 789

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 82/280 (29%), Gaps = 40/280 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + +      + + A      +L    +   A++ L       GD  +      +A+ ++P
Sbjct: 62  DARARHEAGRLDEAETLYRAILGAEPSHAEALHLLGLVRVERGDALTGAELIGRAMALTP 121

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---------------NRNRAILLI 230
            A     ++   +        A+                             R  AIL  
Sbjct: 122 GAAVHHNSLATAFRALGRHEDALREARAAVALRPRSGELRCNLATMLDELGQREEAILHY 181

Query: 231 ARSLE---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             + +                A+ G    +      +++L    + A     + L+ + +
Sbjct: 182 RSAADCAPERAEIWYNLANLLAEVGPAREAEEAFANAVRLAPGFVAAQGNYGRWLMRRGR 241

Query: 276 KRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             +A   L +  ++ P  P     +A     L   +    L    R   ++    ++   
Sbjct: 242 FAEAVERLAEAARLAPGEPSYWNNLAAALQEL--GSFADALACYQRALALDPRHADAFYN 299

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQI 367
           +  +    G  D+A A  + A    PR     I   +A++
Sbjct: 300 LGCLLHLAGDADKAVAHHVGAAAADPRHGAARIAACMAEL 339


>gi|238028665|ref|YP_002912896.1| TPR domain-containing protein [Burkholderia glumae BGR1]
 gi|237877859|gb|ACR30192.1| TPR domain protein [Burkholderia glumae BGR1]
          Length = 614

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 102/282 (36%), Gaps = 17/282 (6%)

Query: 94  SIAAHNIPLARKMHSYV--SQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMM 146
           +  A +  LA+   S     ++    N  L       +L  ++AL   Q   A++    +
Sbjct: 53  AAGASDA-LAQSAFSPAFPEEKKDLPNVPLTAQIVYQVLAAEVALQRSQPAPAYQTYLAL 111

Query: 147 LQIPATREFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +       A  +  +   +    D  +A          +PD+   ++      VLA + 
Sbjct: 112 ARDTKDPRMAQRATEIALAAQSPADALAAANLWR---QFAPDSNRASQVDSALLVLAGKP 168

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A   L ++   A   NR  A+L +   +      + +       + LK   +   A +
Sbjct: 169 AEAEPLLARELARANGENRGDALLALQALIS--RGPNRVEGLTVLQDLLKNDLDRPEAQL 226

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEINKE 323
             A+  ++ + +  A   L++  K+ P    A +    +  +     +    +  + N +
Sbjct: 227 AIARQQLATDDRAGAVASLKQALKLRPDYLPAALMLSQMGPDERAVGVASFEKFVQQNPK 286

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           S E  + ++++ L    ++ A  +     +  P++    L+A
Sbjct: 287 SREGRLALAQLYLADNRLEDAQKQFEAMRRNDPKE-PAPLMA 327



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 70/223 (31%), Gaps = 12/223 (5%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           + + Q P +RE    +L         L  AQ+         P  P    A+    +  K 
Sbjct: 279 KFVQQNPKSRE-GRLALAQLYLADNRLEDAQKQFEAMRRNDPKEPAPLMALALVKIQEKH 337

Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +  A   L Q  + A++          +  +    ++ D   +     +      + I A
Sbjct: 338 YDDAQADLKQYIELAQKRQGADVGQAYVYLAQIAIEQNDDAQASQWLDKIDASSPHYIPA 397

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGKLKRAL 315
            +  A+ L  Q K  +A  +L  I   +PH        + + ++          +L +A 
Sbjct: 398 QVTRAQLLAKQGKTDEARQVLAGIQVSDPHDAAVIARTDASLLFAAKRYREAADRLAQA- 456

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              E   +  +     +    ++G       +  L +   P  
Sbjct: 457 --VEQFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLISAQPDS 497


>gi|116622586|ref|YP_824742.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225748|gb|ABJ84457.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 907

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--P 188
           L +     A      + +          ++     + G+ ++A+ +  KAL++ P     
Sbjct: 714 LLQGDLKGAEYAFRRVTEAEPGYPDGWINVARALIQEGETDAAKPFLAKALELGPGLGRA 773

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           W  +A V       ++  A+  L + +    ++ R+R +L
Sbjct: 774 WFFQAAV--QKADGDYDGALHSLERAR---AQYPRDRVVL 808



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANS 372
             R+ E      +  + V++  ++ G  D A      A+++ P     +   A +++A+ 
Sbjct: 726 FRRVTEAEPGYPDGWINVARALIQEGETDAAKPFLAKALELGPGLGRAWFFQAAVQKADG 785

Query: 373 HNTDKILYWTQSALHA--MPD 391
                +    + A  A    D
Sbjct: 786 DYDGALHS-LERA-RAQYPRD 804


>gi|328544380|ref|YP_004304489.1| TPR repeat [polymorphum gilvum SL003B-26A1]
 gi|326414122|gb|ADZ71185.1| TPR repeat [Polymorphum gilvum SL003B-26A1]
          Length = 621

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 74/202 (36%), Gaps = 8/202 (3%)

Query: 161 YFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             ++    + G++  AQR     L  +P++P     +   Y       R + F+ +    
Sbjct: 15  MRQALALQQAGEVEKAQRIYKAVLKKAPNSPDANHLLGVSYRQLGFPRRGLDFIRKAIAL 74

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A +     A L  AR+L +            A +++ L      A    A +L    +  
Sbjct: 75  APDRAPYHANL--ARTLSDIPGTPAEEVLAAAEKAVALNPGLAEAHNMKAIALNRLGRDT 132

Query: 278 KAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKI 334
           +AE I   +   +P H +    Y  LL +  +    L+       ++ ++ E+LV  S+ 
Sbjct: 133 EAEEIFRFLIAAHPRHADAHRNYGVLLRDRGDHKEALRFFEAAALLDPDNPETLVQRSRA 192

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
             E+     +  +   A+   P
Sbjct: 193 RFELDDFAASQPELEAALARFP 214



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 42/153 (27%), Gaps = 4/153 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E    ++        A  +        GD   A R+   A  + PD P     
Sbjct: 129 GRDTEAEEIFRFLIAAHPRHADAHRNYGVLLRDRGDHKEALRFFEAAALLDPDNPETLVQ 188

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +      +++ +   L                L    +      GD       A  ++
Sbjct: 189 RSRARFELDDFAASQPELEAALARFPA----HGDLNHEMARLMFKIGDAYKGLPYAEAAV 244

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +++   +     L S  + R+A   L K 
Sbjct: 245 ADEPDNVHRQVTLGVILQSLGRSREAVAALRKA 277


>gi|77164576|ref|YP_343101.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
 gi|254434149|ref|ZP_05047657.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani
           AFC27]
 gi|76882890|gb|ABA57571.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
 gi|207090482|gb|EDZ67753.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani
           AFC27]
          Length = 1129

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 22/219 (10%)

Query: 185 PDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           P  P      V        +   A+  L Q            A     ++      G + 
Sbjct: 210 PSGPEAQGIHVALRAYRDGDLLTALGRLEQ-----VPIGAREASYFTLQAALLLVVGRID 264

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYT 300
            +  +   +L+L  +   A    A   ++QN+K  A  +  +  K++P    P+IA  Y 
Sbjct: 265 EARPNIQRALQLDPDHGTAYALQAIIALAQNRKEDALRLARQGAKLDPQSSIPQIALSYV 324

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---- 356
           +    N    L+ A +  E+      +   V+++ L +G +D A   A  A+ + P    
Sbjct: 325 YQGRFNIEQALQHAQQATELFPGEALAWARVAELQLSLGDLDGAAKAAQQAVALDPDLAR 384

Query: 357 --RKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDP 392
                 F  L  I      + ++     Q A+     DP
Sbjct: 385 TQTVRGFAELTAI------DIEEAKASFQRAIELDPADP 417



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 75/251 (29%), Gaps = 16/251 (6%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            +  Y  L   L+ +    I  AR       Q    H       L+  IALA+ +   A 
Sbjct: 245 REASYFTLQAALL-LVVGRIDEARPNIQRALQLDPDHGTAYA--LQAIIALAQNRKEDAL 301

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                  ++         +L +      ++  A ++A +A ++ P        V +  + 
Sbjct: 302 RLARQGAKLDPQSSIPQIALSYVYQGRFNIEQALQHAQQATELFPGEALAWARVAELQLS 361

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   A     Q      +  R + +    R        D+  +      +++L     
Sbjct: 362 LGDLDGAAKAAQQAVALDPDLARTQTV----RGFAELTAIDIEEAKASFQRAIELDPADP 417

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT------HLLSENTVGKLKRA 314
           ++ +    + I Q   +     +E    ++P+  +   Y           E    +L  A
Sbjct: 418 LSRLGLGLAKIRQGDLKAGTEEIEIAASLDPNNSLIRSYLGKAYYDQKRGEAAATELAIA 477

Query: 315 LRLEEINKESV 325
             L   +    
Sbjct: 478 KEL---DPNDP 485


>gi|30019667|ref|NP_831298.1| TPR repeat-containing protein [Bacillus cereus ATCC 14579]
 gi|206970613|ref|ZP_03231565.1| TPR domain protein [Bacillus cereus AH1134]
 gi|218235224|ref|YP_002366300.1| TPR domain protein [Bacillus cereus B4264]
 gi|228920329|ref|ZP_04083676.1| hypothetical protein bthur0011_13440 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228957894|ref|ZP_04119634.1| hypothetical protein bthur0005_14070 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229144217|ref|ZP_04272631.1| hypothetical protein bcere0012_13800 [Bacillus cereus BDRD-ST24]
 gi|296502188|ref|YP_003663888.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171]
 gi|29895211|gb|AAP08499.1| TPR-repeat-containing protein [Bacillus cereus ATCC 14579]
 gi|206734249|gb|EDZ51419.1| TPR domain protein [Bacillus cereus AH1134]
 gi|218163181|gb|ACK63173.1| tetratricopeptide repeat protein [Bacillus cereus B4264]
 gi|228639225|gb|EEK95641.1| hypothetical protein bcere0012_13800 [Bacillus cereus BDRD-ST24]
 gi|228801810|gb|EEM48687.1| hypothetical protein bthur0005_14070 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228839352|gb|EEM84646.1| hypothetical protein bthur0011_13440 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|296323240|gb|ADH06168.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171]
          Length = 420

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 294

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 295 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 336

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 337 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 367


>gi|332299919|ref|YP_004441840.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332176982|gb|AEE12672.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 659

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 20/195 (10%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A     A      ++Q+H    E   Y L  +IAL  +    A  ++   L I +    
Sbjct: 142 GAEQYERADSAALALTQRH--PKEARGYFLAAEIALRRQDTVAAEGRIAEGLAIDSLSAA 199

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAI 208
               L   +   GD   A RY  K+++  P               + +     +++++A+
Sbjct: 200 PYRMLSTIAYLRGDYEGALRYHDKSIEQEPGQASDYINRGLTRYKLKEYRGAMEDYNQAL 259

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                          + A+    R+L   + GD+  +  D +E ++L   ++ A    A 
Sbjct: 260 LL-----------TPHDAVARHNRALLRIEVGDLQGAREDLLEVVRLQPTNLTAHFNLAL 308

Query: 269 SLISQNKKRKAEVIL 283
                 + R+A   L
Sbjct: 309 VQTQTGQYREAIETL 323


>gi|82545894|ref|YP_409841.1| oxidoreductase subunit [Shigella boydii Sb227]
 gi|81247305|gb|ABB68013.1| putative oxidoreductase subunit [Shigella boydii Sb227]
 gi|320183460|gb|EFW58309.1| Cellulose synthase operon protein C [Shigella flexneri CDC 796-83]
 gi|332089547|gb|EGI94651.1| cellulose synthase operon protein C [Shigella boydii 3594-74]
          Length = 1053

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 248 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 305

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 306 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 365

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 366 ALENQGKWAPAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 425

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 426 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 482

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L  +   + +++
Sbjct: 483 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 536

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 537 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 588



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L +  T   A+  L
Sbjct: 480 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 539

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 540 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 599

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 600 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 634



 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 153 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 207

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 208 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 267

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 268 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 311


>gi|262193489|ref|YP_003264698.1| hypotheticalprotein [Haliangium ochraceum DSM 14365]
 gi|262076836|gb|ACY12805.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365]
          Length = 963

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +  L   +        A     +A+ I P       A     +    ++ A+   +  +
Sbjct: 197 GLLYLAQAARYRESFQEANDVFREAVGIDPQLLEANLAWGDMGLEK--YAVALAEQSYDE 254

Query: 216 KNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
               + N   A      +    ++  D+ A++    ++L      + + +  A   I QN
Sbjct: 255 VLKIDPNHPDA--HSGMARVKLEQSYDLAAAFDHLEKALASNPRHLRSLLVRASLEIDQN 312

Query: 275 KKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           +   A+  L +++ VNP       +      L  ++   + +R   L   N        I
Sbjct: 313 QWDAAQATLAEVFAVNPMNFEGRALLATVHWLRDDSAAYEAERERVLAA-NPGYAAFYHI 371

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--NSHNTDKILYWTQS 384
           V++ A+      +A A    A+++ P       +  +        + ++ L W + 
Sbjct: 372 VARSAVREHRYREAIALEEQAVELDPDYHEA--MQALGTGYLRLGDEERGLRWMRK 425



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVV 195
            +A +  + +L+I      A   +         DL +A  +  KAL  +P          
Sbjct: 246 ALAEQSYDEVLKIDPNHPDAHSGMARVKLEQSYDLAAAFDHLEKALASNPRHLRSLLVRA 305

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +   +W  A   L +           RA+L     L + D     A     + +   
Sbjct: 306 SLEIDQNQWDAAQATLAEVFAVNPMNFEGRALLATVHWLRD-DSAAYEAERERVLAAN-- 362

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIANIYTHLLSENTVGK 310
                      A+S + +++ R+A  + E+  +++P  H     +   Y  L  E    +
Sbjct: 363 -PGYAAFYHIVARSAVREHRYREAIALEEQAVELDPDYHEAMQALGTGYLRLGDEERGLR 421

Query: 311 LKR 313
             R
Sbjct: 422 WMR 424



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 51/141 (36%), Gaps = 12/141 (8%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A  L+  +     +     +     E++ +    + A++    +      ++ A  + 
Sbjct: 193 KDAPGLLYLAQAARYRESFQEANDVFREAVGIDPQLLEANL----AWGDMGLEKYAVALA 248

Query: 284 EKIW----KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSKIA 335
           E+ +    K++P HP+  +    +  E +         LE+    N   + SL++ + + 
Sbjct: 249 EQSYDEVLKIDPNHPDAHSGMARVKLEQSYDLAAAFDHLEKALASNPRHLRSLLVRASLE 308

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
           ++    D A A       + P
Sbjct: 309 IDQNQWDAAQATLAEVFAVNP 329



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 17/201 (8%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNR 225
            GD   A + A +AL++ P          +  +  ++   A+       +   + ++   
Sbjct: 725 QGDAPGALQAAGRALELMPAHHLALYVSAEVALRQRDVDTALEHFRALIRAGGDSFDVRG 784

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + +IAR  ++ D+     +      + +L                   +  +A   LE 
Sbjct: 785 RLGMIARLQDDLDE-----AIRQLCAAKRLDPERSYPYSELYDVYKEAGRMDEALAELET 839

Query: 286 -----IWKVNPHPEIANIYTHLLSENTVGKLKRA--LRLEEINKESVESLVIVSKIALEM 338
                  +  P  E+   Y      + V    R        IN    E  +++ +  LE 
Sbjct: 840 YVMLEQMQYGPLRELVGAYAERARWDKV----RVYGEMAVHINPSDAELFLMLGQAYLET 895

Query: 339 GSIDQAHAKAMLAMKIAPRKE 359
           G   QA      A+   P   
Sbjct: 896 GDPAQALFTFDSALLAKPALR 916


>gi|189426262|ref|YP_001953439.1| hypothetical protein Glov_3213 [Geobacter lovleyi SZ]
 gi|189422521|gb|ACD96919.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 639

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 6/197 (3%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +   N   A  +  YV           ++L   +I +  +  N+A E  + +L++     
Sbjct: 386 LGRGNTQEA--VEQYVEFLKLKPESADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNP 443

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A   L       G  + A  + TKAL++  +      A+V  YV  K++      L + 
Sbjct: 444 EANRELAAVYRAKGATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEA 503

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            + A +     A       L    K +   +     ++ +L  +   A     +  +   
Sbjct: 504 VELAPD----DANNHYKLGLIYDFKKEYDNAIASYKKAAELKPDHARALHALGRVYMKTG 559

Query: 275 KKRKAEVILEKIWKVNP 291
           +  +A   LE   K +P
Sbjct: 560 RLSEAREALEAARKADP 576



 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 27/271 (9%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATRE----FAV 157
           A +         +  +      ++   A      + A       + + P          +
Sbjct: 48  AARTKDEAQILSSCPDGAAAQFVQGLQAERSGNIDGAIAGYRRALQKEPGLAVASGNLGL 107

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             LY +     D   A     K +   P  P   +A+ +     K ++ A+    +    
Sbjct: 108 --LYLQKGLQDDAAVALT---KGIAGQP-LPAYHKALGKIMTDRKFYALALYHYGEASAK 161

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   A +L  ++   A +G    +  +   +L L  +   AS+  A   + QN++ 
Sbjct: 162 LPA----DAAVLAGQAEVYAAQGQTDRAVDEFRRALLLDPSHEQASLALAGIYLQQNQQE 217

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRAL-----RLEEINKESVES 327
            A  +L+K    NP     H  +A+IY     +    + +R L      + E      E 
Sbjct: 218 AALNLLKKASTANPRSSSLHLMLADIY-EKNGDAKQAEYERLLGGKKVVVTEELPARAEG 276

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +V+  ++A   G +D+A       +K  P  
Sbjct: 277 VVLGDQLA-AKGEVDKAAEAYRAVLKQQPDA 306



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 87/301 (28%), Gaps = 47/301 (15%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            A   +  A + +  V +Q     E L  L    +     +   A         + ++  
Sbjct: 284 AAKGEVDKAAEAYRAVLKQQPDAIEPLEKL--GALYFRAGRDGDALLAYRDATHLGSSNP 341

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
              Y+L     +   L+ A     +A++  P        +    +       A+    + 
Sbjct: 342 EVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKLADIRLGRGNTQEAVEQYVEF 401

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K   E     A + +  +       ++  +       LKL  ++  A+   A    ++ 
Sbjct: 402 LKLKPES----ADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNPEANRELAAVYRAKG 457

Query: 275 KKRKA----------------------------------EVILEKIWKVNP-----HPEI 295
              KA                                    +L++  ++ P     H ++
Sbjct: 458 ATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEAVELAPDDANNHYKL 517

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             IY      +    +    +  E+  +   +L  + ++ ++ G + +A      A K  
Sbjct: 518 GLIYDFKKEYDNA--IASYKKAAELKPDHARALHALGRVYMKTGRLSEAREALEAARKAD 575

Query: 356 P 356
           P
Sbjct: 576 P 576



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 114/368 (30%), Gaps = 67/368 (18%)

Query: 75  MLHKRNYDKGYKALYTGLM-------SIAAHNIPLARKMHSYVS---QQHTFHNEYLVYL 124
            L K   D    AL  G+          A   I   RK ++       + +        +
Sbjct: 109 YLQKGLQDDAAVALTKGIAGQPLPAYHKALGKIMTDRKFYALALYHYGEASAKLPADAAV 168

Query: 125 LEVQI--ALAERQYNIAHEKLE-MMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L  Q     A+ Q + A ++    +L  P       A+  +Y +        +A     K
Sbjct: 169 LAGQAEVYAAQGQTDRAVDEFRRALLLDPSHEQASLALAGIYLQ---QNQQEAALNLLKK 225

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAI--TFLNQKKKNAKEWNRNRAILLIARSLENA 237
           A   +P +  +   +   Y    +  +A     L  KK    E    RA  ++    + A
Sbjct: 226 ASTANPRSSSLHLMLADIYEKNGDAKQAEYERLLGGKKVVVTEELPARAEGVVLGD-QLA 284

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH----- 292
            KG++  +       LK   ++I                R  + +L   ++   H     
Sbjct: 285 AKGEVDKAAEAYRAVLKQQPDAIEPLEKLGALYFRAG--RDGDALL--AYRDATHLGSSN 340

Query: 293 PE----IANIY----------------THLLSENTVGKLKRAL----------------R 316
           PE    +  +Y                          +LK A                  
Sbjct: 341 PEVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKLADIRLGRGNTQEAVEQYVE 400

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375
             ++  ES +  + +++I ++  +++ A       +K+AP   E    LA + +A     
Sbjct: 401 FLKLKPESADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNPEANRELAAVYRAKGATD 460

Query: 376 DKILYWTQ 383
             + ++T+
Sbjct: 461 KAVEHYTK 468



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 81/232 (34%), Gaps = 17/232 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            + + A E    +L+           + +LYF + R GD   A      A  +    P V
Sbjct: 287 GEVDKAAEAYRAVLKQQPDAIEPLEKLGALYFRAGRDGDALLAY---RDATHLGSSNPEV 343

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   Y    +   A+    +  +    +   R    +  +     +G+   +    +
Sbjct: 344 YYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEAR----LKLADIRLGRGNTQEAVEQYV 399

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305
           E LKL   S    +  A+  +       AE   + + K+ P     + E+A +Y      
Sbjct: 400 EFLKLKPESADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNPEANRELAAVYRA--KG 457

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            T   ++   +  E+ +E  ES   +  I ++    D+       A+++AP 
Sbjct: 458 ATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEAVELAPD 509



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 69/219 (31%), Gaps = 43/219 (19%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V  L  ++ R G+++ A     +AL   P     +  +   Y+       A   L +   
Sbjct: 70  VQGL--QAERSGNIDGAIAGYRRALQKEPGLAVASGNLGLLYLQKGLQDDAAVALTKGIA 127

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQN 274
                  ++A+          D+     + +   E+         A++ A  A+   +Q 
Sbjct: 128 GQPLPAYHKAL-----GKIMTDRKFYALALYHYGEASAKLP--ADAAVLAGQAEVYAAQG 180

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +  +A                            V + +RAL L   +    ++ + ++ I
Sbjct: 181 QTDRA----------------------------VDEFRRALLL---DPSHEQASLALAGI 209

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANS 372
            L+    + A      A    PR     L+ A I + N 
Sbjct: 210 YLQQNQQEAALNLLKKASTANPRSSSLHLMLADIYEKNG 248


>gi|46201014|ref|ZP_00207931.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 540

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 84/274 (30%), Gaps = 12/274 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQI 149
           GL+++       A +  +         N+ +  L   +   A   +N A       +   
Sbjct: 51  GLIALGQGQARRAAEHLTQAVAAD--PNQAVPRLALGRALEALDNHNSAILHYRAILAAD 108

Query: 150 PATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           P   E     L     R+G +   A  YA +A+   P  P     +        E  +A 
Sbjct: 109 PNHAEANAR-LAELLGRLGRNRTEALEYAQRAVASDPRHPEALCTLGTLLHQTGEHVQAA 167

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +      +W    A+ L    L  +  G    +      +  L  +        A 
Sbjct: 168 HVLERSLALRPDW----AVALNNYGLVLSALGQYDRAVAVLSGAADLRRDHAGTRANLAA 223

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESV 325
           +L    +   A V  E+  K+N       +   L+               R    +  +V
Sbjct: 224 ALRGMGRLDDARVHAERATKLNSRDVSGWLELGLIRKALGMPEAAAAAFERAVTADPNAV 283

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +   +++  LE+G  D+A       +++ P   
Sbjct: 284 HAHYCLAEARLELGQKDRAAKNFRRCLELDPEDR 317



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 6/141 (4%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R+++  D G+   +   A   ++       A        + Q + R+A   L +   
Sbjct: 13  AFGRAMQAWDDGNAAEARRLARSIIETKPEFGGAHYLLGLIALGQGQARRAAEHLTQAVA 72

Query: 289 VNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG-SIDQA 344
            +P+   P +A        +N    +     +   +    E+   ++++   +G +  +A
Sbjct: 73  ADPNQAVPRLALGRALEALDNHNSAILHYRAILAADPNHAEANARLAELLGRLGRNRTEA 132

Query: 345 HAKAMLAMKIAPR--KEIFLL 363
              A  A+   PR  + +  L
Sbjct: 133 LEYAQRAVASDPRHPEALCTL 153


>gi|258592074|emb|CBE68379.1| TPR repeat protein precursor [NC10 bacterium 'Dutch sediment']
          Length = 1220

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 93/326 (28%), Gaps = 43/326 (13%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
            ++          A     +++            AR+               L  L    
Sbjct: 234 RLVDAERRAASRLADSESTVTLGEILFDLGKPVEARRGFEKALTLDPGSPRALTGL--GW 291

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           + L E +   A          P T   A+        R+   +  +    +A    P +P
Sbjct: 292 VYLVEGRTEEALRTFRQ--ATPPT-LSALMGQANALYRLNRFDEMEEVVAEAKSRFPSSP 348

Query: 189 WVTEAVVQQYVLAKEWSRAITFLN------------------------------QKKKNA 218
                    Y++     +A+  L                               Q    A
Sbjct: 349 QPPTQTALLYLIQGRVGKALQELEHAVALDPGYAPAHGLRSNIALVRNEKGVAQQAALQA 408

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              N + A   +  SL    +  +  +   A ++L+L  ++ +A I  ++ L    +  +
Sbjct: 409 ILANPSSASAYLDLSLVKQAEFRLEEALQAARKALELEPDNPVAMIQVSRLLFGLGRLSE 468

Query: 279 AEVILEKIWKVNPH-PEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A  ++E+  +  PH P I +   +  L        L    +  E +    E  +      
Sbjct: 469 ALSLVEEARQRAPHDPLITSTWGFLMLTQGKVQEALSAFGQAIEQDSTRGEPHLGRGLAL 528

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIF 361
                 ++A  +  +A  + P+  +F
Sbjct: 529 FRQNKTEEAVQEMWMATLLEPKVALF 554



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 90/268 (33%), Gaps = 32/268 (11%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           +        +    +T       L+     +G    A+R   KAL + P +P     +  
Sbjct: 237 DAERRAASRLADSESTVTLGEI-LF----DLGKPVEARRGFEKALTLDPGSPRALTGLGW 291

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y++      A+    Q            A++  A +L   ++ D +       E+    
Sbjct: 292 VYLVEGRTEEALRTFRQA-----TPPTLSALMGQANALYRLNRFDEME--EVVAEAKSRF 344

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE--IANIYTHLLSENTVGKLK 312
            +S       A   + Q +  KA   LE    ++P   P   + +    + +E  V +  
Sbjct: 345 PSSPQPPTQTALLYLIQGRVGKALQELEHAVALDPGYAPAHGLRSNIALVRNEKGVAQQA 404

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--------L 364
               +   N  S  + + +S +      +++A   A  A+++ P   + ++        L
Sbjct: 405 ALQAILA-NPSSASAYLDLSLVKQAEFRLEEALQAARKALELEPDNPVAMIQVSRLLFGL 463

Query: 365 AQIEQANSHNTDKILYWTQSALHAMPDP 392
            ++ +A S   ++          A  DP
Sbjct: 464 GRLSEALSL-VEEARQ------RAPHDP 484


>gi|322419153|ref|YP_004198376.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
 gi|320125540|gb|ADW13100.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
          Length = 881

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 91/283 (32%), Gaps = 12/283 (4%)

Query: 96  AAHNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           A   + +A+K +    +   + +  N     LL+V   LA +Q + A E+   ++    +
Sbjct: 602 AKGRLLMAQKNYKQALKVFDEVSALNPDRGALLKVGCYLAMKQGDKAVEQARRLIASHPS 661

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  L       GD  SA   A +A+ +   +      +   Y   K+ + A++   
Sbjct: 662 SVKGYLLLASIFQGGGDTTSAIAQANQAIRVDGKSVEARVLLGGLYRARKDNAAAMSAFQ 721

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              K   +    R  +          +            + K        +   A     
Sbjct: 722 DALKVQPDSVPARFAVATLLEGTGKKQEAAARYRSILDLNGKYLPALNNLAYLCADGY-- 779

Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLV 329
             +K +A  +    ++++P +P + +   Y    +  +   +K   R   +         
Sbjct: 780 -GRKEEALRLAISAFRLDPGNPSVTDTVGYALYKNGRSQEAVKVLERAATLLPGDPTVRY 838

Query: 330 IVSKIALEMGSIDQAHAKAM--LAMKIAPRKEIF-LLLAQIEQ 369
            +     + G   +A       LA+   P       LLAQ+++
Sbjct: 839 HLGLAYHQAGDKARAQQALQDSLALGEYPDSAAARTLLAQLKR 881



 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 38/291 (13%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           + I+  N   AR+  + ++     + + L  L    + LA    + A      +LQ    
Sbjct: 167 LHISMGNEDRARRALNELTGADPRNFKALYML--AMLELAAGNKDQAAAVYRKILQQDKN 224

Query: 153 REFA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL--AKEWSRA 207
           +  A   +  L  E     D + A+  A + +   P        +++  V    + ++ A
Sbjct: 225 QPAARFKLGGLLLEKK---DPDQAEAAADQLIKDYPQRGDGY--LLKGMVAYYRQNYTEA 279

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS---- 263
           IT L Q  K       ++ + L   S    +          A+   ++  + + AS    
Sbjct: 280 ITQLQQSIKLGPTLEAHQFLGLSYYSKGELE---------TALSQFRIILDRVPASRRAR 330

Query: 264 ICAAKSLISQ-------NKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRAL 315
           +  A+ L++Q       N+ RK   + E     + H  +   Y      +  + +L RA 
Sbjct: 331 LMTAQILLAQKRVDDAVNEVRKVLALDEA--DASAHHLLGTAYMAQGQFDEGMRELDRAT 388

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           RL   + + V + +         G   +  ++   A+K +P      LL  
Sbjct: 389 RL---DPKLVNAYLKKGAFYFSRGRETEGESELTTAVKASPDALNSRLLLA 436


>gi|168699185|ref|ZP_02731462.1| TPR repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 693

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 6/194 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            + P A ++          H +    L   +  L       A         +        
Sbjct: 18  GDHPEAERLAGQALAVDPGHADAHSLLGLAR--LQSGDRGAALPHWRAAAALRPDVAAHR 75

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L     R+ D  SA+     A +++P        +          S A+   ++    
Sbjct: 76  YNLAELCRRLNDPVSAEPEFRAAAELAPQWAEAHFGLGNVLGDLGRVSEALAAYDRAVAL 135

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              + R     L  R     ++G ++ +  D   +L    +   A +    +L   ++  
Sbjct: 136 QPSFAR----ALYNRGNLLREEGRVVPAERDYRAALAADPDLTDARVNLGAALGELHRWS 191

Query: 278 KAEVILEKIWKVNP 291
           +AE    +  +  P
Sbjct: 192 EAERCYREALERRP 205



 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 63/237 (26%), Gaps = 21/237 (8%)

Query: 134 RQYNIAHE-KLEMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +  A     + +   P      ++  L     + GD  +A  +   A  + PD     
Sbjct: 18  GDHPEAERLAGQALAVDPGHADAHSLLGLAR--LQSGDRGAALPHWRAAAALRPDVAAHR 75

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             + +      +   A        + A +W    A           D G +  +      
Sbjct: 76  YNLAELCRRLNDPVSAEPEFRAAAELAPQW----AEAHFGLGNVLGDLGRVSEALAAYDR 131

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           ++ L  +   A       L  + +   AE         +P             + T  ++
Sbjct: 132 AVALQPSFARALYNRGNLLREEGRVVPAERDYRAALAADP-------------DLTDARV 178

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
                L E+++ S         +    G  D   A A   +      E   L+   E
Sbjct: 179 NLGAALGELHRWSEAERCYREALERRPGDADLEAALAGAVLAQGRTAEAARLMEACE 235


>gi|58388836|ref|XP_316573.2| AGAP006535-PA [Anopheles gambiae str. PEST]
 gi|55239308|gb|EAA10847.3| AGAP006535-PA [Anopheles gambiae str. PEST]
          Length = 1170

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 71/249 (28%), Gaps = 53/249 (21%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q AL    Y +A +    +  +P      +     E  + G+ +     A         
Sbjct: 603 AQAALDALNYQVARDAYVKVRNLP---WLELIGDLKERQKRGETSKEVLLA--------- 650

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                      Y  A ++  A     +   N+K       + +   + E   +G      
Sbjct: 651 ---------DTYAFAGKYKEASRLYQKSGNNSKALAMYSDLRMFDLAQEFLKEGSAADRK 701

Query: 247 HDA-IESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHL-L 303
                 +   C      +  AA+ L+S  +  +A  I+ E+ W        A++   +  
Sbjct: 702 ELIRRRAEWACSVHEPRA--AAELLLSAGEPERAIEIVAEQGW--------ADVLLDIGR 751

Query: 304 SENTVGK---------LKRALRLEEINKESVESLVIVSK------IALEMGSIDQAHAKA 348
                 +         L+R   L      + E    + +      + +E     +A   A
Sbjct: 752 RLAASERVPLELIASHLRRLKAL----PLAAEIYRKLGEEEQVVQLHVEARDWPEAFRLA 807

Query: 349 MLAMKIAPR 357
               K+ P 
Sbjct: 808 EHLPKVLPS 816


>gi|225873374|ref|YP_002754833.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225791928|gb|ACO32018.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 402

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 90/298 (30%), Gaps = 23/298 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE----KLEMM 146
           G++     +   A +        H      L  LL             A +        +
Sbjct: 72  GVLLYFQGDYAGANQALGKALALH-PDIPKLQALL-GMSEERSGDPQHAVKDLAAAFPQL 129

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                  E  + SL         L  A     +   + P  P +     + Y        
Sbjct: 130 HDQKIQMEAGL-SLIHLYQAHDQLAEAAGIVRQLQALQPKNPQLIYVAYRLYS------- 181

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                 ++  +      + A +  A + E++ + +  A+     ++L +      A    
Sbjct: 182 --DLAGEQLLSLSLVAPDSAQMHAAMAYEDSMQNNNQAAIAQYRKALAIDPKLPGAEFSL 239

Query: 267 AKSLISQNKKRK---AEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEI 320
           A+ L + N  ++   A  I E+  + NP+ E   +A    +L   N         R  +I
Sbjct: 240 AQLLQNANDVKQQQEAASIYEQALRENPYDEPSALALGDMNLTQGNFKIAQTYYERALKI 299

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
           + E  E+   ++K  +      QA      ++++ P        LA + +      D 
Sbjct: 300 DPEDAEANFGLAKALIGNNESKQALPYLEKSIRLDPTNASAHFRLATLYRQEGREQDA 357



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 13/164 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS---RAITFLNQKKKNAKEWNR 223
             +  +A     KAL I P  P    ++ Q    A +      A +   Q  +    ++ 
Sbjct: 212 QNNNQAAIAQYRKALAIDPKLPGAEFSLAQLLQNANDVKQQQEAASIYEQALRENP-YDE 270

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+ L      N  +G+   +      +LK+      A+   AK+LI  N+ ++A   L
Sbjct: 271 PSALALGDM---NLTQGNFKIAQTYYERALKIDPEDAEANFGLAKALIGNNESKQALPYL 327

Query: 284 EKIWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEIN 321
           EK  +++P     H  +A +Y      ++   +L+   RL ++ 
Sbjct: 328 EKSIRLDPTNASAHFRLATLYRQEGREQDARQQLQIFQRLRKLK 371


>gi|224826392|ref|ZP_03699494.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
 gi|224601493|gb|EEG07674.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
          Length = 388

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 21/208 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
            GL ++   +   A K  + V++Q     E  L      ++     + + A    + ML+
Sbjct: 44  RGLDALVEEDSGAAVKALAEVARQQPAVQELPLTL---GKLYRKRGENDRAIRLHQRMLE 100

Query: 149 --------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                     A R      L  +  + G ++ A+    K L  +         ++  Y  
Sbjct: 101 STDLPSEQRDAVRFE----LAQDFRKAGLVDRAEEILLKLLSGNMGRS-ARRQLLDIYQQ 155

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            ++W +AI    + + +A  +    A      +     K +   +     E+L      +
Sbjct: 156 DRDWEKAIATAKELRSDAHSYQHEVAQYHCELAQGELYKSNYPEARRHVTEALAANRKCV 215

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWK 288
            AS+       ++ +  +A       W+
Sbjct: 216 RASLILGDIEFAEGRLEEA----IAAWQ 239



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 64/227 (28%), Gaps = 35/227 (15%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  ++    D  +A +   +     P    +   + + Y    E  RAI    +  ++
Sbjct: 44  RGL--DALVEEDSGAAVKALAEVARQQPAVQELPLTLGKLYRKRGENDRAIRLHQRMLES 101

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               +  R  +    + +    G +  +    ++                  L+S N  R
Sbjct: 102 TDLPSEQRDAVRFELAQDFRKAGLVDRAEEILLK------------------LLSGNMGR 143

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLE-EINKESVESLVIVSKIA 335
            A              ++ +IY      E  +   K           E  +    +++  
Sbjct: 144 SARR------------QLLDIYQQDRDWEKAIATAKELRSDAHSYQHEVAQYHCELAQGE 191

Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYW 381
           L   +  +A      A+          L+L  IE A     + I  W
Sbjct: 192 LYKSNYPEARRHVTEALAANRKCVRASLILGDIEFAEGRLEEAIAAW 238


>gi|21231630|ref|NP_637547.1| tetratricopeptide repeat protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|21113323|gb|AAM41471.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
          Length = 392

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 27/303 (8%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI    + ++   +   +  +      +           +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGLSKPDDALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +    +     A    E+  + +P       P +   Y  +
Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                   +  A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414
               L  +  A   +    L   +     +   +P +       G  +  W    P  K 
Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379

Query: 415 LCY 417
              
Sbjct: 380 WGT 382


>gi|307545459|ref|YP_003897938.1| hypothetical protein HELO_2869 [Halomonas elongata DSM 2581]
 gi|307217483|emb|CBV42753.1| hypothetical protein HELO_2869 [Halomonas elongata DSM 2581]
          Length = 393

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 31/192 (16%)

Query: 190 VTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +V       EW  A+   L    +  ++  R  A  L   + +       + +   
Sbjct: 148 AKRLLVDLLEREGEWQAALDVALPSLVRQHEDIRRAAAHWLCELADQERHSASPVLARRH 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             ++L      + A++  A+  +   + R A   L +I      P+    +   +    +
Sbjct: 208 LKQALSTDGRCVRANLLLAEMALDTGQYRPAIRFLSRI------PDQDKAFVPTM----L 257

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
             L RA RL        E+ +I                +    +  AP   + +LLA+  
Sbjct: 258 EPLSRAYRLL-----DDETGLI---------------RQLESLLDQAPYTSVIILLAESL 297

Query: 369 QANSHNTDKILY 380
           + +  +    L 
Sbjct: 298 RRHHGDAHAALE 309


>gi|330819860|ref|YP_004348722.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
 gi|327371855|gb|AEA63210.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
          Length = 426

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 84/274 (30%), Gaps = 39/274 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRN 224
            G L  A + +++AL++ P + W      +  +   +   A+    +     +AK     
Sbjct: 58  RGRLEVANQASSRALELDPHSGWAFVEKSRVLLAQGDVDGALGNFERAFDADHAKGKWMR 117

Query: 225 RAILLIARSLENADKGDMIASY------------------------HDAIESLK----LC 256
             ++L+ +  +    G++  +Y                          AIE+      L 
Sbjct: 118 EWVMLLLKQHDYERAGEVALAYCENQPKRAQAWFILGYSLERGGYLSAAIEAYNRCRMLD 177

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKL 311
                 ++  A+  +       A   +E+     P   I     A IY            
Sbjct: 178 SRFRFVNVSLARVFLMMGDIPSASFRIEEAIADEPADSIAWFTQARIYQSRRQTEAAEIA 237

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
               R   +  +  ESL++ ++I  E G   +A+     A+++             EQ +
Sbjct: 238 --IERALALAPDCPESLLLHAQILREAGRWSEANCLVERAIELVLTDGEIRFAQAWEQLS 295

Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVW 405
           + +      W      +         +   ++ W
Sbjct: 296 TGDFG--RGWLDCEWRSHAGASRQCIERLPTARW 327


>gi|331685187|ref|ZP_08385773.1| cellulose synthase operon protein C [Escherichia coli H299]
 gi|331077558|gb|EGI48770.1| cellulose synthase operon protein C [Escherichia coli H299]
          Length = 1157

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 106/353 (30%), Gaps = 69/353 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ ++   AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSSNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYV-------------------LAKEWSRAITFLNQKKKNAKEWN 222
            +     WV  A +Q+                      A + S+A   L +     K  +
Sbjct: 470 ALEKQGKWVQAAALQRQRLALAPGSVWITYRLSQDLWQAGQRSQA-DTLMRNLAQQKPND 528

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLIS 272
             +          +      +A  +    +           +L  + +   +  A  L  
Sbjct: 529 PEQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRE 585

Query: 273 QNKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVES 327
             K+ +AE +L    +  P P    ++    +     + T  +      L      + ++
Sbjct: 586 SGKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADA 639

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           ++ ++++ +  G    A ++                   + QA   +T     
Sbjct: 640 ILGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+      +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPLAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738


>gi|91976772|ref|YP_569431.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
 gi|91683228|gb|ABE39530.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
          Length = 664

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 1/104 (0%)

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
                P        +L     R+GD   A  +  +AL ++P  P    A+ Q Y+   EW
Sbjct: 307 AFADTPDLASQGHKNLGTSFERLGDEKRAVEHYREALRMNPHLPEAHNALAQFYIRKGEW 366

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             A+  L+Q            A +   R+    D G+  +++ +
Sbjct: 367 KDALAHLDQAV-FTDPIRAKAAGVAGWRANALFDMGEGSSAFRE 409


>gi|257457326|ref|ZP_05622497.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
 gi|257445248|gb|EEV20320.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
          Length = 247

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 3/163 (1%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                       +   A      +    +      +    +++ K   +   A    A+ 
Sbjct: 23  TAAAGLFAKGNIDSETAKTYFEIAEAYTEVSKYDKAEEFYLKAAKDPAHKNAAEYNLARV 82

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVE 326
              Q +  KA+ ILE+ +K  P   +   A  Y+   + +         +L + + E+ E
Sbjct: 83  YGLQGEWTKAKPILERQYKEAPGNILILKAYSYSLAATGDEERACAMYKKLYDEDSENPE 142

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           S +  ++I +     D+A A                +LA++E+
Sbjct: 143 SALNYARILILSKRYDEATALIEELKTRFTESTETRVLAELEE 185


>gi|240128947|ref|ZP_04741608.1| hypothetical protein NgonS_10057 [Neisseria gonorrhoeae SK-93-1035]
 gi|268687332|ref|ZP_06154194.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268627616|gb|EEZ60016.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 389

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 106/350 (30%), Gaps = 55/350 (15%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAK 268
                + + +    A      +     K +   +      A+E+ K C     A++    
Sbjct: 169 QLLSHDEQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKC---TRANMILGD 225

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANIYTH-LLSENTVGKL----KRALR 316
               Q     A        +   H        ++   Y      E  + +L    +    
Sbjct: 226 IEHRQGNFPAAVEAY-AAIEQQNHVYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPE 284

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQAN 371
           L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+ ++ A 
Sbjct: 285 LDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDPAW 336

Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
             + D +       L      ++   + +  S    W    P       F
Sbjct: 337 KADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|169622878|ref|XP_001804847.1| hypothetical protein SNOG_14664 [Phaeosphaeria nodorum SN15]
 gi|160704871|gb|EAT77856.2| hypothetical protein SNOG_14664 [Phaeosphaeria nodorum SN15]
          Length = 692

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 25/218 (11%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQYV--- 199
           Q P         LY +    G+ + A ++  +AL   PD     + +     +++     
Sbjct: 369 QDPDALVLRGRILYAQ----GENDKALQHFRQALSCDPDFKAAVKYLRMVQKLERMKSEG 424

Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                A  +  A+    +            + +L  R+L N+      A+  D  ++L+L
Sbjct: 425 NASFKAGRYQEAVNTYTEALAVDPLNKNTNSKILQNRALCNSRLKQWKAAVADCDKALEL 484

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRA 314
             +   A    AK+L       +A   L+ +++ NP  P +A        E    K K  
Sbjct: 485 DPSYTKARKTRAKALGESGNWEEAVRELKAMYEANPSEPGLAKEIRDAELELKKSKRKDY 544

Query: 315 LRLEEINKESVESLVIVS--KIALEM------GSIDQA 344
            ++  + K+  E+ V  +  K+A+        G  D A
Sbjct: 545 YKILGLEKDCTETEVKKAYRKLAIVHHPDKNPGDEDAA 582


>gi|319787164|ref|YP_004146639.1| transglutaminase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465676|gb|ADV27408.1| transglutaminase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 382

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 45/148 (30%), Gaps = 3/148 (2%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +  R  A     R  E    GD+  +      + +     + A        +     
Sbjct: 176 RRIDDTRALAHFRNNRGAELMAAGDLGGARAQLDAATEADPGFVPAWNNLGVLEMRAGNI 235

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVESLVIVSK 333
             A   L   W + P H    +    L   +   +       RLE++ +    +  +++ 
Sbjct: 236 EAATRALRTAWSLAPEHTATLSNLVKLYERSGQSREAADFVARLEQVRRNDPFAQFVLAL 295

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              E G+   A      A+++  R+  F
Sbjct: 296 GCEETGNYACAVTHYRNAIRLQARQHAF 323


>gi|108759512|ref|YP_630186.1| TPR domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108463392|gb|ABF88577.1| TPR domain protein [Myxococcus xanthus DK 1622]
          Length = 1426

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 102/376 (27%), Gaps = 83/376 (22%)

Query: 87   ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER------------ 134
            AL  G       +   AR   +       +  E + +L     A                
Sbjct: 1000 ALVRGAAYARLGDWKKARAELARTRVNDRYPPEAVSWLALADAAEGNGAQARELLEKALH 1059

Query: 135  ---------------------QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                                  Y+ A    E   + P   E A  SL       G  + A
Sbjct: 1060 AAKRPRNDMRLALGQLYWRERAYDKAQALFEEAQKDPRDYEAAC-SLGRLMLSRGLPDMA 1118

Query: 174  QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             +  T+A++ +       +A+ +  +       A+      +          A      +
Sbjct: 1119 LKPLTQAVERNGAHGEARDALGRTLLALGRTQDALKQFEAWQLENPGS----AAAHKGFA 1174

Query: 234  LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            L     G    +      S+KL  +   A    A  L      R     LE+  K++P  
Sbjct: 1175 LALFHSGRRKDAEGAVQRSVKLASDDAEAHKLRAAILFGAGDARGGFSALERANKLDPKD 1234

Query: 294  -----EIANIYTH----------------LLSENTVGKL---------------KRALRL 317
                 EIA  +                     ++T G++               +    L
Sbjct: 1235 AGTFCEIALAFMRQGNSGNAEAAFAAARREGPDDTCGRVGELYAQLPGGGRGAARTLEDL 1294

Query: 318  EEINK---ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQIEQAN 371
                    +   +   +++  L  G++  A   A  A+++AP   R ++ L +  + Q  
Sbjct: 1295 AARAPTVWDKAFARATMARALLGAGAVKDARTAADEAVRLAPFDGRAQLALGMVALRQKQ 1354

Query: 372  SHNTDKILYWTQSALH 387
                D      + A+ 
Sbjct: 1355 ---EDVARAALEKAVE 1367


>gi|40063048|gb|AAR37904.1| TPR domain protein [uncultured marine bacterium 560]
          Length = 732

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 82/250 (32%), Gaps = 13/250 (5%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNS 172
             F NE L+Y +         Q ++A +  E  +   P   E   Y+L      +G L++
Sbjct: 35  KDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVN-YNLGLTFQELGQLDA 93

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +     L ++P+       +       ++   A+    +      ++    A   +  
Sbjct: 94  AVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDY--AEAHNNLGN 151

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +L+    G +  +     +++ +  +          +L    +  +A    E+   + P 
Sbjct: 152 ALKEL--GQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKCYEQAIAIKPD 209

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
               H  +      L   +    +K   +   I  +  E+      +   +  +D+A   
Sbjct: 210 YAEAHNNLGISLRELGQVDAA--VKSYEKALAIKPDFAEAYYNRGNVLKGLKRLDEALVS 267

Query: 348 AMLAMKIAPR 357
              A+ + P 
Sbjct: 268 LNRAIVLKPD 277


>gi|228951996|ref|ZP_04114092.1| hypothetical protein bthur0006_14080 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807673|gb|EEM54196.1| hypothetical protein bthur0006_14080 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 434

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++        LK   +         E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYI--------LKGQEK--------YEELIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|89110483|ref|AP_004263.1| cellulose synthase subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170083040|ref|YP_001732360.1| cellulose synthase subunit [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188494263|ref|ZP_03001533.1| cellulose synthase operon protein C [Escherichia coli 53638]
 gi|226524756|ref|YP_026226.4| cellulose synthase subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|256025745|ref|ZP_05439610.1| cellulose synthase subunit BcsC [Escherichia sp. 4_1_40B]
 gi|300950867|ref|ZP_07164749.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|300955013|ref|ZP_07167423.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|301028212|ref|ZP_07191481.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
 gi|301646046|ref|ZP_07245951.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|307140219|ref|ZP_07499575.1| cellulose synthase subunit BcsC [Escherichia coli H736]
 gi|331644240|ref|ZP_08345369.1| cellulose synthase operon protein C [Escherichia coli H736]
 gi|269849703|sp|P37650|BCSC_ECOLI RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|85676514|dbj|BAE77764.1| cellulose synthase subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|169890875|gb|ACB04582.1| cellulose synthase subunit [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188489462|gb|EDU64565.1| cellulose synthase operon protein C [Escherichia coli 53638]
 gi|226510983|gb|AAT48188.4| cellulose synthase subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|260447455|gb|ACX37877.1| cellulose synthase operon C domain protein [Escherichia coli DH1]
 gi|299878698|gb|EFI86909.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
 gi|300318055|gb|EFJ67839.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|300449843|gb|EFK13463.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|301075717|gb|EFK90523.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|315138106|dbj|BAJ45265.1| cellulose synthase subunit [Escherichia coli DH1]
 gi|331036534|gb|EGI08760.1| cellulose synthase operon protein C [Escherichia coli H736]
          Length = 1157

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|331005630|ref|ZP_08328999.1| HemY protein [gamma proteobacterium IMCC1989]
 gi|330420555|gb|EGG94852.1| HemY protein [gamma proteobacterium IMCC1989]
          Length = 414

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 120/399 (30%), Gaps = 49/399 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M + +  F ++ + I  FI +         +  G+     + +  + +L   LF      
Sbjct: 1   MKKALIGFCIVLVAIAFFIYLIQQENSYFLLVLGDTSIEMNFWFAVGVLLLALFLVW--- 57

Query: 60  AVSRFFLSCPAMLFHMLHK---RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
                       ++ +  K   R+  K       GL++    +  LA K    V      
Sbjct: 58  LCVTMINRSAKKVYAVHQKIIGRSEKKAQLKTTQGLIAFIEGDWSLAHK--KLVLSARHV 115

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSA 173
            +  + YL   + A    +   A + L    + P   E A+     ++           A
Sbjct: 116 SSPIINYLAAARCAYEVGEEQEALKLLHKAEKAPGNNELAI--SLTQARMQLSNKQYEQA 173

Query: 174 QRYATKALDISPDAPWVTEAVVQQYV----LAKEWSRAITFL----NQKKKNAKEWNRNR 225
               ++A  I+P      + V+           +W      L     +     +E     
Sbjct: 174 LATLSRAEKINP----AHKVVLSLQKSVYYALSDWPALKKLLPILHEKNIGTLEERYYLE 229

Query: 226 AILLIARSLENADKGDMI--ASYHDAIES--LKLCDNS---IMASICAAKSLISQNKKRK 278
             L  A   +N +K   +        +E     L  +             +LI  N    
Sbjct: 230 QTLCQATVKDNIEKNSALSNEQRASLLEGCVNNLPAHFRKDSTILTLYINTLIELNAYDS 289

Query: 279 AEVILE--------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           A  +L         + W           Y  L   +    L +A    +  K S    + 
Sbjct: 290 AAKVLARNINREWNESWVKQ--------YGLLNYSDAQAALVQAESWLKQEKNSAVLHLT 341

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           + ++ L+     +A    + ++ I P  E +  LA++++
Sbjct: 342 LGRLCLQNKQWGRAKDFLLSSIAIKPLPESYAELARLQR 380


>gi|315618437|gb|EFU99024.1| cellulose synthase operon protein C [Escherichia coli 3431]
          Length = 1157

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|291567437|dbj|BAI89709.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 672

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 109/318 (34%), Gaps = 64/318 (20%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESCRIGDLNSAQRYATKALDIS 184
               + ++  A       L+I       VY     LY E     D   A      AL ++
Sbjct: 50  AYQKQGEFEPALIAYTKALEIKP-DFGEVYGNLGSLYAEHKLWEDAVQAYDV---ALRLN 105

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMI 243
           PD   +   + Q  ++  ++  AI+    ++  AK+ +  +A  L+  +L N +K     
Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAIS--YCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAE 163

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------N 297
           A+Y   +E    CD      +     L  Q   + A    +K  ++NP  E+A       
Sbjct: 164 AAYQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNA 220

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +     E  +   ++A+   +IN  +  S + + +  LE+G + +A A  + A+++ P 
Sbjct: 221 WFRLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNPN 277

Query: 358 K----------------------------------------EIFLLLA-QIEQANSHNTD 376
                                                     ++  L   + + +  + D
Sbjct: 278 SYWAHENLGDALSQNGCFSEAIPIYLQALQKVPEDKPGVSNSLYRQLGYAMREQSQADVD 337

Query: 377 KILYWTQSALHAMPDPLW 394
           K   W    +   PD  W
Sbjct: 338 KASQWLSEMISHPPDHNW 355



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 47/237 (19%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L ++    G+   A    TKAL+I PD   V   +   Y   K W  A+   +   +  
Sbjct: 48  GLAYQKQ--GEFEPALIAYTKALEIKPDFGEVYGNLGSLYAEHKLWEDAVQAYDVALRLN 105

Query: 219 KEW--------------------------------NRNRAILLIARSLENADK-GDMIAS 245
            +                                 +  +A  L+  +L N +K     A+
Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAEAA 165

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------NIY 299
           Y   +E    CD      +     L  Q   + A    +K  ++NP  E+A        +
Sbjct: 166 YQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNAWF 222

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                E  +   ++A+   +IN  +  S + + +  LE+G + +A A  + A+++ P
Sbjct: 223 RLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNP 276


>gi|291280328|ref|YP_003497163.1| tetratricopeptide repeat protein [Deferribacter desulfuricans SSM1]
 gi|290755030|dbj|BAI81407.1| tetratricopeptide repeat protein [Deferribacter desulfuricans SSM1]
          Length = 237

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 17/161 (10%)

Query: 131 LAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                Y  A + LE  L+                +Y+      DLN A  +  KA++++P
Sbjct: 17  FLAGDYEKARQYLEKFLKYKDNFADVYNFLGF--IYYI---SNDLNRAIDFYEKAIELNP 71

Query: 186 DAPWVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNR----AILLIARSLENAD 238
                   +   Y    E+ +A      L + K      +++     A +    + +   
Sbjct: 72  YYTEALMNITVIYHSIGEYEKAEKYFKMLKENKNIKGIADKHCIGKLANIHAELAKKYLS 131

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 +  +  ++LKL        +  A +L   NK  +A
Sbjct: 132 LFMYDEALEEYEKALKLAPEFPDIRLAYANALRDANKLEEA 172


>gi|296812797|ref|XP_002846736.1| bimA [Arthroderma otae CBS 113480]
 gi|238841992|gb|EEQ31654.1| bimA [Arthroderma otae CBS 113480]
          Length = 805

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 17/202 (8%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDA--P 188
            +  ++ A +  +   Q+   R    Y+L   E     + + A      A++  P     
Sbjct: 592 LQGDHDQALKCFKRATQLDP-RFAYGYTLQGHEYMSNEEYDKALDAYRHAINADPRHYSA 650

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W     V +          + F  Q  + A   N    +L+ +  L    + ++ A+   
Sbjct: 651 WYGLGKVYER------MGKLKFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQ 704

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLL 303
              +  L   S++A +  A++L+  N+   A     +L+ +    P  H  +  +Y  + 
Sbjct: 705 YSRASSLSPQSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMMQ 764

Query: 304 SENTVGKLKRALRLEEINKESV 325
            +     +K       ++ ++ 
Sbjct: 765 DKGNA--IKHFTTALNLDPKAA 784


>gi|254282132|ref|ZP_04957100.1| TPR domain protein [gamma proteobacterium NOR51-B]
 gi|219678335|gb|EED34684.1| TPR domain protein [gamma proteobacterium NOR51-B]
          Length = 750

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 5/121 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD + A++   KAL+I+P     +  + +          A   L  +   +     +
Sbjct: 590 RDRGDNSLAEQQLRKALEINPHLQAASLNLAELLRQTGRADEAQKLLEGQLDESAPAPFH 649

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+ L+A       +G    +      + +L  + +      A +L    +  KA   LE
Sbjct: 650 HALGLMA-----VRQGRTSEALEHLETAARLDSDDVNYRYVYAIALNDTGEPDKAIAELE 704

Query: 285 K 285
            
Sbjct: 705 S 705


>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 988

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 4/175 (2%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            ++ +Y+ A    +  LQ       A         R G+ + A     +AL + P +   
Sbjct: 547 QSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAA 606

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                       E+ RAI  L+Q  +    +          R +    KGD+  +  D  
Sbjct: 607 FNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYH----RGMAFRHKGDLDRALADLN 662

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
           E+++L      A      +  ++ +  +A   L +  ++ P  E    +  +  E
Sbjct: 663 EAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRGE 717



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 8/165 (4%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPD 186
              ++R+Y+ A     + +      +       L F+S   G+ + A     +AL + P 
Sbjct: 205 AFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSK--GEHDRAIADFDQALRLDPK 262

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             +        +    E+ RAI   +Q      ++         AR+     K D   + 
Sbjct: 263 YTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKY----TFAYTARAFAFQSKRDYDRAL 318

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D  ++L+L   S+ A         S+    +A    ++  +++P
Sbjct: 319 ADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDP 363


>gi|121715232|ref|XP_001275225.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus clavatus
           NRRL 1]
 gi|119403382|gb|EAW13799.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus clavatus
           NRRL 1]
          Length = 939

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G+++ A+R   +A + +
Sbjct: 579 AADLERNHGTKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQN 637

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240
           P+   +  A V+    A +  +A   L+  ++ A         +   R L N D+     
Sbjct: 638 PNNEDIWLAAVKLEADADQTDQARELLSTARREAGTDRVWIKSVAFERQLGNIDEALDLV 697

Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                                        +        + C  S+   + A++       
Sbjct: 698 NQGLQLYPKADKLWMMKGQIYEIQNKYPQAREAYSTGTRACPKSVPLWLLASRLEEKAGA 757

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     + +A  L     +E   S ++ S+
Sbjct: 758 VVKARSVLDRARLAV--PKSAELWTESVRVERRANNIGQAKVLMAKALQEVPNSGLLWSE 815

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +A +      K+     +F+ +A+I        +K + W + A+ +  D
Sbjct: 816 SIWYLEPRAQRKARS-LEAIKKVDNDPTLFITVARIFWGERR-LEKAMTWFEKAIVSDSD 873


>gi|289647679|ref|ZP_06479022.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 1298

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 60/295 (20%)

Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156
            A +       ++   N  L   L + +   A+ Q   A   L +   + P     R   
Sbjct: 334 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213
              L     + G L++AQ    + L      P     ++       +   A+  L+    
Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++    +  R +A+     +     +GD+ A+     +++K   +++      A+  + 
Sbjct: 450 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509

Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298
            ++  KA V+++++ K  P                                   P++  +
Sbjct: 510 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569

Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              +                     L    RL+ +   S E  + ++   ++   
Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDADE 624


>gi|209920990|ref|YP_002295074.1| cellulose synthase subunit BcsC [Escherichia coli SE11]
 gi|209914249|dbj|BAG79323.1| putative cellulose synthase [Escherichia coli SE11]
 gi|324021167|gb|EGB90386.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3]
          Length = 1157

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|86131164|ref|ZP_01049763.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85818575|gb|EAQ39735.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 460

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 21/193 (10%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A  +  K L++ P+   V EA+ + Y   +++  A   +        ++  + A +  
Sbjct: 100 EAALDF-NKFLELEPNNEDVLEALYEVYFQQRDYDAAEATVKNLINFDVQYKEDLARIYT 158

Query: 231 A-----RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +      +L+  D+ D         + LK             +  +      +    +EK
Sbjct: 159 STKRYNEALDLIDELDEEIGTDIYRDRLKN------------RLYLLSGDTSRQVKAIEK 206

Query: 286 IWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
               NP  E   +  I  +    NT    + AL L+++N  + E  + + K  L    ID
Sbjct: 207 NIASNPKSEAEYLKLILLYSEQGNTQKAYETALELQKVNPYADEVHLALYKFNLNDNKID 266

Query: 343 QAHAKAMLAMKIA 355
           +A +     ++  
Sbjct: 267 EAISSMQKVLEST 279


>gi|194335759|ref|YP_002017553.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308236|gb|ACF42936.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 4489

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 83/275 (30%), Gaps = 39/275 (14%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +  +  L        + + + A      +L     +  A   L   + +    + A    
Sbjct: 30  DAPVARLQAALTFHQQGRLDEAEAVYREILVTEPDQFDAFRLLAIIAAQRKQFHEAIALF 89

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR 232
            +A +I+ +               K ++ A+   ++      ++     NR   + ++ R
Sbjct: 90  ERAFEINSEHANSLNNYGIVLCEVKRYNDAVLSFDKAIALNPDYGEAALNREAVLKILKR 149

Query: 233 ----------------SLENADKGDMIASYHDAIE-------SLKLCDNSIMASICAAKS 269
                           +   +D G+++       E       +L L  + +  +    + 
Sbjct: 150 YDEVVLSCGLAFKGNNAAVCSDYGNVLQELSRYEESLLYYDRALALEPDYV--AAYFNRG 207

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEEINK 322
           L  +  KR  E +L     +   P+ A    H    N + +LKR         R   +  
Sbjct: 208 LALKKLKRYDEAVLSYDKAIALEPDYAEA--HSNRGNALTELKRYHDAVLSYDRALALKP 265

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  ++         E+   D+A      A+   P 
Sbjct: 266 DYAKAHANRGVALQELKQYDEAVLSYGRALACKPD 300



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 75/248 (30%), Gaps = 16/248 (6%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            + L        +   + A      +L+       A+  L   + +  +   A+    +AL
Sbjct: 3666 IRLHSALALHQQGCLDDAEVLYREILRANPEHFDALRLLATVAAQRKNFPEAEELFDQAL 3725

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
             I+P    V           K +  A+   +   +   ++    A     R L       
Sbjct: 3726 KINPAHATVWNNRGIALQELKRYDEALQCYDNALERKADY----AAAFFYRGLVLTKLHR 3781

Query: 242  MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
               +      +L L  +   A      +L   N+  +A V  +K+  + P     +    
Sbjct: 3782 YDEAVLSYNRALILKPDYAAACYNLGNTLQKLNRYDEALVCYDKVLVIKP----GDAEAC 3837

Query: 302  LLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                 T+ +L+R         +   +  +  ++   +  +  ++    +A       + I
Sbjct: 3838 SNRGITLKELQRYDEAVLSYEKALALRPDYADAYYNLGNVLQDLKRYREALDNYDKVLAI 3897

Query: 355  AP-RKEIF 361
             P    ++
Sbjct: 3898 RPGDAHVY 3905



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 59/199 (29%), Gaps = 15/199 (7%)

Query: 166  RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            + G L+ A+    + +  +PD     + +       + +  A+   +       +     
Sbjct: 1596 QQGCLDDAEVLYREVVHSNPDYFEAVQLLATVAAQKQSFHEALELFDHALAIKPD----H 1651

Query: 226  AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             I L  R            +      +  L  +   A    A +L    +  +A    EK
Sbjct: 1652 PITLNNRGNTLIALKRYGDALSSYERAFLLKPDYAEAFYNRALALQELERHEEAVSSYEK 1711

Query: 286  IWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEM 338
               +   P+ A  Y        + +L+R         ++  +  +  ++         E+
Sbjct: 1712 AICIK--PDYAEAY--YKRGVALQRLQRYDDALLCYDKVIALKPDYADAHYSRGLALQEL 1767

Query: 339  GSIDQAHAKAMLAMKIAPR 357
               D+A       + + P 
Sbjct: 1768 QRYDEALISYDAVIALKPD 1786



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 77/259 (29%), Gaps = 15/259 (5%)

Query: 93   MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
            M++A       + + +           Y   L        +   + A      ++     
Sbjct: 2876 MALALPKARSEQDVSAVAETAARSGPAYFATLQSALALHQQGCLDDAEVLYREVVHSNPD 2935

Query: 153  REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               AV  L   + +  + + A      AL I PD P          +  K +  A++   
Sbjct: 2936 YFEAVQLLATVAAQKQNFHEALELFDHALAIKPDHPITLNNRGNTLIALKRYGDALSSYE 2995

Query: 213  QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            +      ++    A     R+L   +      +     +++ +  + + A      +L  
Sbjct: 2996 RAFLLKPDY----AEACYNRALALQELERHEEALSGYEKAIGIKPDYVEALYKRGVALKR 3051

Query: 273  QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEI------NKESV 325
               +R  + +L     +   P+ A+   H      + +L+R    L         N +  
Sbjct: 3052 L--QRYDDALLCYDKVIALKPDYADA--HYSRGLALQELQRYDEALSNYGEAIARNPQFA 3107

Query: 326  ESLVIVSKIALEMGSIDQA 344
            E+ V       ++     A
Sbjct: 3108 EAYVNRGNALTDLKRYQDA 3126



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 43/151 (28%), Gaps = 11/151 (7%)

Query: 124  LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            L        +   + A      ++        AV  L   + +    + A      AL I
Sbjct: 1588 LQSALALHQQGCLDDAEVLYREVVHSNPDYFEAVQLLATVAAQKQSFHEALELFDHALAI 1647

Query: 184  SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             PD P          +  K +  A++   +      ++    A     R+L   +     
Sbjct: 1648 KPDHPITLNNRGNTLIALKRYGDALSSYERAFLLKPDY----AEAFYNRALALQELERHE 1703

Query: 244  ASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +     +++ +  +        A++   + 
Sbjct: 1704 EAVSSYEKAICIKPDY-------AEAYYKRG 1727


>gi|42524217|ref|NP_969597.1| hypothetical protein Bd2807 [Bdellovibrio bacteriovorus HD100]
 gi|39576425|emb|CAE80590.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 588

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 90/232 (38%), Gaps = 13/232 (5%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              +  LY  + +  D   AQ  A   L + P        +   Y   KE+ +A  + + 
Sbjct: 123 LLVLGGLYS-ADKSYDKAIAQYKA--VLHLEPKNSEAPIYIGSLYADKKEFKKAEQYFHS 179

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLIS 272
             K+      +     I  +  + +  +   S   A++ +L++      A I  A   + 
Sbjct: 180 LLKDPGYETPHEVYYYIGLTHLDQEGVNHQQSAEKALKKALEIKPGFEDALISLANLYLL 239

Query: 273 QNKKRKAEVI-LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES---- 327
           QN + KA  + LE   + N  P++A++   +  E+     K   +LE I   + ES    
Sbjct: 240 QNNRGKALALCLEYQKQENFSPKVADLIAQIYIEDG-DSEKAYSQLEMI-SGNSESSLDV 297

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKI 378
            + ++ + +E    +QA AK    +   P  +     LA +++  + + +  
Sbjct: 298 QMKMALLLIEQKRFNQAGAKLKDIVAQYPTADSARYYLAAVQE-ETGDMENA 348


>gi|186684910|ref|YP_001868106.1| hypothetical protein Npun_R4816 [Nostoc punctiforme PCC 73102]
 gi|186467362|gb|ACC83163.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 226

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 5/170 (2%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           N  L  LLE  +  +    Y+ A    +    +          + +   + G+  +A   
Sbjct: 36  NPQLKQLLEEGRRLVDSGDYSGAIAVYQQAASLDPKNAKIHSGIGYLYAQQGNYQAALTS 95

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A+ I+P+      AV        + + A     +  + A + NRN     +  ++  
Sbjct: 96  YRRAIAINPNNSDFYYAVGYIKANLGDTAGA----KEGYRRAIQLNRNNVNAYLGLAVTQ 151

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  GD  A+     +++ L  N+             + + ++A  +L+K 
Sbjct: 152 SRMGDYTAATWAYQQAIDLDKNNAQTYELMGSMYKQRRQTKQANSLLQKA 201


>gi|331665151|ref|ZP_08366052.1| cellulose synthase operon protein C [Escherichia coli TA143]
 gi|331057661|gb|EGI29647.1| cellulose synthase operon protein C [Escherichia coli TA143]
          Length = 1157

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  N +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSNQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|228938730|ref|ZP_04101334.1| hypothetical protein bthur0008_13930 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971612|ref|ZP_04132235.1| hypothetical protein bthur0003_13890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978222|ref|ZP_04138599.1| hypothetical protein bthur0002_14250 [Bacillus thuringiensis Bt407]
 gi|228781239|gb|EEM29440.1| hypothetical protein bthur0002_14250 [Bacillus thuringiensis Bt407]
 gi|228788135|gb|EEM36091.1| hypothetical protein bthur0003_13890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820971|gb|EEM66992.1| hypothetical protein bthur0008_13930 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 434

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++        LK   +         E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYI--------LKGQEK--------YEELIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M +      +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYLDALKHYESAYT 381


>gi|332526320|ref|ZP_08402448.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
 gi|332110458|gb|EGJ10781.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
          Length = 921

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 88/324 (27%), Gaps = 47/324 (14%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A               E L  L   +  LA R Y  A    + + Q+       + 
Sbjct: 585 DTRGALSAAREAVAALPSSRELLAAL--ARSELANRDYQQALTSFQKLAQLQPRSPAGLL 642

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                   + D   A+R    AL+++P       A++  Y  +  ++ A+    + +K  
Sbjct: 643 GQADAYLGLKDEAGAERSLKAALELAPRLLPAQRALLGLYAGSGRYAEAVALAREIQKQR 702

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                  AI  +A +     +    A+      +++    +  A    A +L +  +  +
Sbjct: 703 P----GEAIGYLAEADVETARRKPEAALALIRSAVQKAPGAESAIRLHA-TLRAAGQGDE 757

Query: 279 AEVILEKIWKVNPHPE------------IAN---IYTHLLSENTVGK------------- 310
           AE      W+   HP+            +A            + + +             
Sbjct: 758 AER-FAASWQKQ-HPDDIAFRFHLGDLALATKDWAAAEARYRDVLQRQPSNPMALNNVAW 815

Query: 311 ----------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                     L  A +   +          ++  A   G + +A       ++ +P    
Sbjct: 816 LMLQQHKPGALALAEKANTLAPGQPALRDTLALAAAAEGQLPRALQLQKETVQRSPDSPS 875

Query: 361 FLLLAQIEQANSHNTDKILYWTQS 384
             L        S +          
Sbjct: 876 LRLTLAKLMLQSGDKTGARAELDK 899



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 95/286 (33%), Gaps = 9/286 (3%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +AA ++  A      ++++    +     LL+ Q A     +       + ++Q      
Sbjct: 241 VAAGDVAGAEAHVQQLAKK--LPDLAGTRLLQAQTAYLRSDFEGVRRLTQPLVQAAPNNP 298

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +        ++  L  A+    +A+ + P  P  T  + + Y+   +  + +  L  +
Sbjct: 299 LVLQLAGAAEYQLRALPQAETLLAQAVKLQPGMPLATRLLAETYLRTGQADKTLALLQPE 358

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             + K   R   +LL  ++      G+   +     ++ K+   +  A    A   I + 
Sbjct: 359 LDSGKA--RAETLLLAGQA--YLQIGEARQAEAVFAQAAKVAPQNPRARTAVALGKIGRG 414

Query: 275 KKRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                   LE     +     ++A I ++L   +    LK    L+    +     ++  
Sbjct: 415 DTSAGLGELETLAAHESGVGADMALIASYLRQGDRAKALKAIDGLDAKRPQDPTPELMRG 474

Query: 333 KIALEMGSIDQAHAKAMLAM-KIAPRKEIFLLLAQIEQANSHNTDK 377
           ++ L       A A    A+ + A        LA ++ A       
Sbjct: 475 RVLLLGNDRAGARAAFGRALERDASYFPAVASLAALDLAEGKADAA 520



 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           AA     A +  +   +QH   ++         +ALA + +  A  +   +LQ   +   
Sbjct: 751 AAGQGDEAERFAASWQKQH--PDDIAFRFHLGDLALATKDWAAAEARYRDVLQRQPSNPM 808

Query: 156 AVYS---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           A+ +   L  +  + G    A   A KA  ++P  P + + +        +  RA+    
Sbjct: 809 ALNNVAWLMLQQHKPG----ALALAEKANTLAPGQPALRDTLALAAAAEGQLPRALQLQK 864

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
           +  + + +    R  L    +      GD   +  +  +  KL    
Sbjct: 865 ETVQRSPDSPSLRLTL----AKLMLQSGDKTGARAELDKLAKLGPGF 907



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 75/298 (25%), Gaps = 37/298 (12%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPATR 153
           +A  +   A                 +  L   +  LA        +      L  P   
Sbjct: 69  LAMGDAAGAVVELRKAEMLKLPEARVVPAL--ARATLAAGDERRVVQTWGATRLGQPEAD 126

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                +L     R+     A++    AL   P          +Q     +   A+   ++
Sbjct: 127 ADLSTTLAMAYLRLDQTPKAEQAVEAALQAQPGYAPAKLLKARQLAARADLDGALRLTDE 186

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 +     A LL  + LE   + D  A+     ++++     + A       L++ 
Sbjct: 187 --LTGADARNAEAWLLKGQ-LEQYGRQDRDAALAAYRKAVEADPRQMTAHQSLVALLVAA 243

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
                AE                                   +L +   +   + ++ ++
Sbjct: 244 GDVAGAEA-------------------------------HVQQLAKKLPDLAGTRLLQAQ 272

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            A      +         ++ AP   + L LA   +       +       A+   P 
Sbjct: 273 TAYLRSDFEGVRRLTQPLVQAAPNNPLVLQLAGAAEYQLRALPQAETLLAQAVKLQPG 330



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 77/260 (29%), Gaps = 36/260 (13%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A K    +  +     +    L+  ++ L       A       L+  A+   AV
Sbjct: 447 GDRAKALKAIDGLDAKR--PQDPTPELMRGRVLLLGNDRAGARAAFGRALERDASYFPAV 504

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            SL       G  ++A++     L   P       A+ + +      + A +        
Sbjct: 505 ASLAALDLAEGKADAARKRFDDELARDPKNWRAMLALAEWHERTGGGADAASTQYAAAVK 564

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A     N A+  +    +   + D   +   A E++    +S       A+S ++    +
Sbjct: 565 AAP---NEALPRLRLIDDRLARRDTRGALSAAREAVAALPSSRELLAALARSELANRDYQ 621

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           +A                               L    +L ++   S   L+  +   L 
Sbjct: 622 QA-------------------------------LTSFQKLAQLQPRSPAGLLGQADAYLG 650

Query: 338 MGSIDQAHAKAMLAMKIAPR 357
           +     A      A+++APR
Sbjct: 651 LKDEAGAERSLKAALELAPR 670


>gi|7429602|pir||E65151 hypothetical 126K protein (dctA-dppF intergenic region) -
           Escherichia coli (strain K-12)
          Length = 1166

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 361 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 418

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 419 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 478

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 479 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 538

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 539 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 595

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 596 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 649

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 650 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 701



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 593 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 652

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 653 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 712

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 713 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 747



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 266 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 320

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 321 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 380

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 381 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 424


>gi|237747684|ref|ZP_04578164.1| HemY protein [Oxalobacter formigenes OXCC13]
 gi|229379046|gb|EEO29137.1| HemY protein [Oxalobacter formigenes OXCC13]
          Length = 401

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 124/401 (30%), Gaps = 35/401 (8%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R+  +   +        ++      +V   W       S    L +L   +    L+F 
Sbjct: 1   MRIFLWILGLFATAVGLAVLVRFNAGNVVFFWPPYRVDISLNFFLLLLVLLIILLFLVFK 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                L  P+ +  +  ++   +  +AL   L ++       A+K  +         N  
Sbjct: 61  AIHMALRLPSRISQIREQKKEQESNQALRQSLKALFEGRFVQAQK--AAEKAWEWEKNRG 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+  + + A +QY+   E L+ +          + +           + A    +  
Sbjct: 119 YAALIGARASQAVQQYDKRDEYLKSIEDNEDYDTACLVTKAELYIDEHQPHKALDVISDL 178

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---LIARSLENA 237
                    V    ++       W   +  +    K+    +  RA+L   L   +  N 
Sbjct: 179 NANGTRHIHVQRLSLKANQQIGNWKEVLRLVQSLDKH----HSIRAVLSEKLKEAAYVNL 234

Query: 238 DKGDMIASYHDAI------ESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIW 287
                  +   A+      E  +        +I AAK+       +K+E     +L+K W
Sbjct: 235 FDTAAPDAESVALVWQDVPEQEREKPA---VAISAAKAFYHCMLPKKSEEILYRVLDKFW 291

Query: 288 KVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                  + N +         ++   +     R  E      + L+ +  +A      D+
Sbjct: 292 DDR----LVNAFVEFAESREPDDLTVQAGHCERWLEKYGRQPQLLLALGVLASRQKQFDK 347

Query: 344 AHAKAMLAMKIAPRKEIF----LLLAQIEQANSHNTDKILY 380
           + +    A+ +   +++     LLLAQ+     H    + +
Sbjct: 348 SASCFEEAISLTSDRKLLYQAHLLLAQLHDRLGHEEKAVRH 388


>gi|320539472|ref|ZP_08039141.1| putative conserved protein [Serratia symbiotica str. Tucson]
 gi|320030597|gb|EFW12607.1| putative conserved protein [Serratia symbiotica str. Tucson]
          Length = 390

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 81/258 (31%), Gaps = 28/258 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  AV  L  +    G  + A+         +   IS
Sbjct: 83  GEVDRAICIHQALMESSSLSFEQRLLAVQQLGRDYMSAGMYDRAEDMFSQLIDEEDFRIS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W +AI    +  K   +      A      +L+     D+ 
Sbjct: 143 -----ALQQLLVIHQATSDWMKAIDVAEKLVKLGMDKQHIEIAHFYCELALQAVSSDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVIL--EKIWKVNPHPEIAN 297
            +      +          SI   +  ++Q+   KA    + +L  +K       P +  
Sbjct: 198 KAMSLLKRAASADKQCARVSIMFGRIYMAQHDYAKAIESLQRVLSQDKELVSETLPMLHQ 257

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y H   +          R  E N  +  + +++++I  +    D   A     ++  P 
Sbjct: 258 CYQH-WPDQQQVWTGFLKRCVEENCGAT-AELMLAEIIEQYEGCDVVQAYINRQLQRHPT 315

Query: 358 KEI-FLLL----AQIEQA 370
             + + L+    A  E  
Sbjct: 316 MRVFYRLMDYHLADAEDG 333


>gi|66044282|ref|YP_234123.1| peptidase aspartic, active site [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254989|gb|AAY36085.1| Peptidase aspartic, active site [Pseudomonas syringae pv. syringae
           B728a]
          Length = 654

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 48/310 (15%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLVY---LLEVQIALAERQYNIA----------HE 141
            +   ARK  +   +         E L     L + Q A+       A           +
Sbjct: 116 GSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAI--NDAEQALGPQQVLTRRRQ 173

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            ++  + +              +   GD ++A   A +A+   P      + +V   +  
Sbjct: 174 AIQEQVAVDK-AATGYK-----ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQ 227

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +++ A +   +        N N A LL+ R       GD   +  D  ++  +   ++ 
Sbjct: 228 GQYAEARSAATEALA----LNGNDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLP 281

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRAL 315
                A    +  +  +A   L+K        P  E+   Y    + +    +   KR  
Sbjct: 282 LRE-QASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVD 340

Query: 316 RLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           R   +      ++  S +  S  A  +    +            P +++F          
Sbjct: 341 RQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLDYQQTGDLQMPAQQVF-------DTR 393

Query: 372 SHNTDKILYW 381
              +D    W
Sbjct: 394 RAVSDLSREW 403



 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 93/308 (30%), Gaps = 33/308 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
              M+    +  LA  +           +   +  L       + + +      +   + 
Sbjct: 40  EAYMAYNRKDYDLA--IAKANEALRQRGDAQQLRDLITLAERDKYRRDHPQRAYK--TRP 95

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                    +L   + R  D + +  +A KA+  +P        +++     +   +A  
Sbjct: 96  QPGYLEGNRALRAYANR--DYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQA 153

Query: 210 FL---NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD-------AIESLKLCDNS 259
            +    Q     +   R R  +    +++ A  G    +  D       A E+++     
Sbjct: 154 AINDAEQALGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQ 213

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
           +        +LI+Q +  +A                A     L   +    ++R    + 
Sbjct: 214 MAYRKLLVSALIAQGQYAEARSA-------------ATEALALNGNDATLLVQRGQMRQR 260

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           +  +   +    ++ A+ +G++      ++ A    P + +  L    +       D++ 
Sbjct: 261 LG-DQDGARQDFAQ-AMAVGNLPLREQASLYAAMGQPSEALQRLQKARDAGELQPGDEVQ 318

Query: 380 --YWTQSA 385
             Y+   A
Sbjct: 319 IAYFLSQA 326



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L    +L                 TG  ++A  +   A        +       Y   L+
Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
              IA    QY  A         +    AT          +  R+GD + A++   +A+ 
Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234
           +  + P   +A +  Y    + S A+  L + +   +         A  L        +L
Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGAL 333

Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264
           +   + D             A  +++  +++   + 
Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369


>gi|83309792|ref|YP_420056.1| methyltransferase [Magnetospirillum magneticum AMB-1]
 gi|82944633|dbj|BAE49497.1| Predicted methyltransferase [Magnetospirillum magneticum AMB-1]
          Length = 451

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 13/171 (7%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMML 147
            G++  +   +  AR   +   ++   H   L  L  LE            A      +L
Sbjct: 68  RGVILASLGRLDEARTAFAKCLERFPTHEPALTNLGGLE----HLAGNLAEAERCYRAVL 123

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                   A+++L       G  + A+ +A +A++I P  P     +      A   + A
Sbjct: 124 DFAPRSALALHNLAGLFLAQGRRDEAEAFARRAVEIEPG-PDTALRLADILGEAGRHAEA 182

Query: 208 ITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              L         +    RA+   A+      +G  + +      +L L  
Sbjct: 183 AAMLGPVLDAYPADVRLWRAVGHAAK-----KQGRTLDAVAAYRTALGLDP 228


>gi|330869318|gb|EGH04027.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 1298

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 60/295 (20%)

Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156
            A +       ++   N  L   L + +   A+ Q   A   L +   + P     R   
Sbjct: 334 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213
              L     + G L++AQ    + L      P     ++       +   A+  L+    
Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++    +  R +A+     +     +GD+ A+     +++K   +++      A+  + 
Sbjct: 450 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509

Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298
            ++  KA V+++++ K  P                                   P++  +
Sbjct: 510 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569

Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              +                     L    RL+ +   S E  + ++   ++   
Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDADE 624


>gi|251793293|ref|YP_003008021.1| HemY protein [Aggregatibacter aphrophilus NJ8700]
 gi|247534688|gb|ACS97934.1| HemY protein [Aggregatibacter aphrophilus NJ8700]
          Length = 423

 Score = 50.3 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 7/167 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R +    ++   + +   +S     V I   N +   S   ++      L     + A
Sbjct: 1   MIRALFLMLLLLAGLIAGPYLSGKQGYVRIETTNHIIEMSLTTLVIFFVISLAVVYSIEA 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
               F +     +    +R   K  K    GLM +   +   A K+    ++        
Sbjct: 61  AINRFCNLSNNTYSWFSRRKRVKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SDEPV 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
           L ++   + A        A+  L     I AT      SL  E  R 
Sbjct: 119 LNFIKAAEAAQQRGDEFSANRYL-----IQATEIAGTDSLILEIART 160


>gi|224369129|ref|YP_002603293.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223691846|gb|ACN15129.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 761

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 48/304 (15%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA-TREF 155
            N   A + ++ V      + + LV L      +  +    A EK+E +L+  P  T   
Sbjct: 76  GNPREAFQAYTKVETHDPDNKDALVKL--ASFFILGKDLEKAKEKIEHVLKLDPDNTDA- 132

Query: 156 AVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               L+ ++    +  D+++A     + +D  PD     +A+ +  +  +E+ +A   L 
Sbjct: 133 ----LFLKAQILTQEKDVDTASTLLERIIDKKPDHINALQALARIKMFKQEFEQAEALLV 188

Query: 213 QK-----------------KKNAKEWNRNRAILLIARSLENAD-------------KGDM 242
           +                      K +    A LL A    + +             K + 
Sbjct: 189 KAVDVDTAAIQPRLALVTFLIAKKRFKDAEAQLLAAVEKNSENSDVRIILGNFYFRKRNN 248

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
            ++    +++++L   ++   + AA      N + KA  + +K   + P   IA   T  
Sbjct: 249 PSAEAAYLKAVELAPKAMKPYMTAAGFYDITNSRDKALDMYQKALAIQPD-NIAVKTTLA 307

Query: 303 LSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357
             +    ++  A  L         +  ++ ++ S+I +      QA        K  P  
Sbjct: 308 RFQYKEQQVDAAEALVAEMLKQRPKFRQARMLKSEILVSKKQFSQALMLLQDLEKEDPKD 367

Query: 358 KEIF 361
             + 
Sbjct: 368 ARVL 371



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 97/261 (37%), Gaps = 10/261 (3%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           LA+   + V + +  +      ++  +  +   +   A    + ++ +        Y + 
Sbjct: 420 LAQAQAAEVLKLNPSNYRAA--MISAKSHMNTGKIQKAEAGFKTLIALDPENPAGYYQMG 477

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           F    +   + A+ Y  +A+D++     V   +++ Y    +   A     ++ + AK+ 
Sbjct: 478 FLKSALKQYDVAESYLNQAMDMNNMLLDVFTLLLKNYTNQNKLDTAHALCQKQLERAKDK 537

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE- 280
            +  AI+          + +   +      +++   + +      A+  +++  + KA  
Sbjct: 538 PQILAIINYLEGSLYLAQKETNKAKDAYYRAIEANPDYLEPYGAIARIALAEQDREKAVI 597

Query: 281 ---VILEKIWKV-NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS-KIA 335
               +LEK   +  PH  + +IY    S +         +  EIN E   +   ++  +A
Sbjct: 598 QYLTLLEKNPNLPAPHMMLGSIYETDKSFDKAE--AHYRKALEINPEYAPAANNLAYHLA 655

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
                 DQA A A +A K  P
Sbjct: 656 ERTDKFDQALALARIAKKKLP 676



 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 66/223 (29%), Gaps = 41/223 (18%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI-- 227
            + A     KAL I PD   V   + +     ++   A   + +  K   ++ + R +  
Sbjct: 282 RDKALDMYQKALAIQPDNIAVKTTLARFQYKEQQVDAAEALVAEMLKQRPKFRQARMLKS 341

Query: 228 ---------LLIARSLENADKGDMIASYHDAIESL-------------------KLCDNS 259
                          L++ +K D   +     + L                   +L    
Sbjct: 342 EILVSKKQFSQALMLLQDLEKEDPKDARVLYFQGLCQIGLQENDMARAAVARAVELNPGY 401

Query: 260 IMASICAAKSLISQNK----KRKAEVILE---KIWKVNPHPEIANIYTHLLSENTVGKLK 312
           + A +  A     +      + +A  +L+     ++      + +  +H+ +        
Sbjct: 402 LKAHLLLADIYFHERSFDLAQAQAAEVLKLNPSNYRAA----MISAKSHMNTGKIQKAEA 457

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               L  ++ E+      +  +   +   D A +    AM + 
Sbjct: 458 GFKTLIALDPENPAGYYQMGFLKSALKQYDVAESYLNQAMDMN 500



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 23/201 (11%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
              +   A+     AL +SPD P V   + +  +       A     + + +  +     
Sbjct: 40  SDKEYKKAEIEFRNALQLSPDDPQVWSLLGKTLMKLGNPREAFQAYTKVETHDPDNKD-- 97

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              L+  +       D+  +       LKL  ++  A    A+ L  +     A  +LE+
Sbjct: 98  --ALVKLASFFILGKDLEKAKEKIEHVLKLDPDNTDALFLKAQILTQEKDVDTASTLLER 155

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLK-------RALRLEEINKE----SVESLVIVSKI 334
           I    P         H+ +   + ++K       +A  L     +    +++  + +   
Sbjct: 156 IIDKKP--------DHINALQALARIKMFKQEFEQAEALLVKAVDVDTAAIQPRLALVTF 207

Query: 335 ALEMGSIDQAHAKAMLAMKIA 355
            +       A A+ + A++  
Sbjct: 208 LIAKKRFKDAEAQLLAAVEKN 228



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 9/176 (5%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y A+    +++A  +   A  +  Y++      N    +++   I   ++ ++ A     
Sbjct: 579 YGAIAR--IALAEQDREKA--VIQYLTLLEKNPNLPAPHMMLGSIYETDKSFDKAEAHYR 634

Query: 145 MMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             L+  P     A    Y  + R    + A   A  A    P+ P V + +   Y     
Sbjct: 635 KALEINPEYAPAANNLAYHLAERTDKFDQALALARIAKKKLPNDPGVMDTLGYVYYKKGL 694

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
           +  A++ L    +   +      ++     L    KGD   +     ++L+L  + 
Sbjct: 695 YGNAVSELLDSLEKIPDAP----VVHYHLGLTYLKKGDKALAVTQLEKALELNKDF 746


>gi|73537360|ref|YP_297727.1| TPR repeat-containing cellulose synthase operon C [Ralstonia
           eutropha JMP134]
 gi|72120697|gb|AAZ62883.1| TPR repeat:Cellulose synthase operon C,
           C-terminal:Tetratricopeptide TPR_4 [Ralstonia eutropha
           JMP134]
          Length = 1265

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 82/286 (28%), Gaps = 43/286 (15%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +A   G   +A  N+  A       +++     E L  L  V+  L + +++ A E    
Sbjct: 275 QARRRGEQQLARGNVREAETALESANRKRRNDGETLGNLGLVR--LRQGRHDEARELFAR 332

Query: 146 MLQ------------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Q                R +   +   E+   G     +  A +AL + P        
Sbjct: 333 AEQLDSGNRGKWHSLKDTARFWGTVAKAREANAQGKPAQGEALAREALALQPGNANARGV 392

Query: 194 VVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +    +   +   A   L +       +    R ++ +    + +D+   + +   +   
Sbjct: 393 LADALIAQNKLPEAEALLRETLAGPEPDIGTLRTLVKLLNDSQRSDEVGPLIASTGSR-- 450

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           LK   + + +    A  L  Q ++  A+       K +P                   L 
Sbjct: 451 LKGSADELRS--LRADLLSLQGEQLLAQR------KQSPA------------------LA 484

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           R      +      +   +++   ++             +  +P  
Sbjct: 485 RLEESIRLAPNDPWTRFTLARAYRDLALPALGRRVMEDGLAASPTS 530



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 63/202 (31%), Gaps = 22/202 (10%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            + +   +   A   L       +   R     L+  +     +GD   +   A E L  
Sbjct: 697 DRRIADGDLKGAERMLYAVPAAQQNDRRW----LLELADLREAQGDYDGAAQAAREVLTT 752

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVG 309
                 A +  A+ L  Q K  +A   +  +    P  +I      A  +T +  E+   
Sbjct: 753 HPQDADARLTVARMLERQGKDDQALEEVRAVLADTPEDDIDTRLAVARRFTAMRREDEA- 811

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            L     L E   E  +  +   +IA   G  + A      A     R+       +I +
Sbjct: 812 -LAVVTPLRERFPERSDVTMQAGRIAQSRGDFNGAAVLYREARVQEQREN------EIPR 864

Query: 370 ANSHNTDKILYWTQSALHAMPD 391
               + ++ L     AL A  +
Sbjct: 865 PQGTSAERALG----ALEARRE 882


>gi|238761231|ref|ZP_04622208.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638]
 gi|238761484|ref|ZP_04622460.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638]
 gi|238700458|gb|EEP93199.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638]
 gi|238700711|gb|EEP93451.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638]
          Length = 1146

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 37/230 (16%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL      +A +K +    I  +  +A+  L   +    D  SA+++  +AL + P    
Sbjct: 351 ALKAGDTALAQQKYQQARLIDGSDSYALIGLGDVAVARHDDKSAEQHYQQALRLDPTNSS 410

Query: 190 VTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
               +   Y       +A+ +LN     Q+ K     +  +  +L  ++   A +     
Sbjct: 411 AVRGLANIYQRESP-QKALDYLNNLPRSQQAKMRDTLDSLQLAMLKQQAEALAAQQQWHQ 469

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +     +  K   + +  +   A++L  +    +A+                        
Sbjct: 470 AAEKYQQVQKRAPDDVWITYRLAEALAQEGDSAQADA----------------------- 506

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                   +  +L     +  E +   +      G   QA A        
Sbjct: 507 --------QFHQLASRKPDDPEQVYAFALYLSSTGRDSQALAHLATLPTT 548



 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 86/315 (27%), Gaps = 51/315 (16%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++ A +  LA++ +          +  L+ L    +A+A      A +  +  L++  T 
Sbjct: 351 ALKAGDTALAQQKYQQARLIDGSDSYALIGL--GDVAVARHDDKSAEQHYQQALRLDPTN 408

Query: 154 EFAVYSLYFESCRIG--------------------DLNSAQRYA---------------- 177
             AV  L     R                      D   + + A                
Sbjct: 409 SSAVRGLANIYQRESPQKALDYLNNLPRSQQAKMRDTLDSLQLAMLKQQAEALAAQQQWH 468

Query: 178 ------TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILL- 229
                  +    +PD  W+T  + +      + ++A    +Q   +   +  +  A  L 
Sbjct: 469 QAAEKYQQVQKRAPDDVWITYRLAEALAQEGDSAQADAQFHQLASRKPDDPEQVYAFALY 528

Query: 230 ---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285
                R  +       + +        +L     +  +    + L +   +  A   L +
Sbjct: 529 LSSTGRDSQALAHLATLPTTQWNDNIHELDQRLKLGQVLTLTRQLRASGDEAGAITALRQ 588

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
               N   ++      L   +    L    R+     ++ ++ +   +  +  G +  A 
Sbjct: 589 Q-PANTQIDLTLADWALERGDYSEALAGYQRIRAREPQNPDARLGEIEAYIAEGRLSDAR 647

Query: 346 AKAMLAMKIAPRKEI 360
                         +
Sbjct: 648 QHLQTEPLTGEGASV 662


>gi|182413699|ref|YP_001818765.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177840913|gb|ACB75165.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 302

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 53/167 (31%), Gaps = 13/167 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L   +      +   A      + +  +     +  L + + R  D ++A R+  KA+ +
Sbjct: 30  LAAARALFEAHKDAEAQSAYAALTEKDSGNPEPLRCLGYLALRRNDGDAAVRWFEKAVGL 89

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----------NAKEWNRNRAILLIAR 232
           +P       A+   +    + +  ++     KK           +  +   ++ +    R
Sbjct: 90  APTHAETHRALGDAFGTKAQQAGVLSKFGLAKKCLASYQRAARLDPADARTHQCLFEYYR 149

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                  G    +  +A    +L       ++  A    ++ K  +A
Sbjct: 150 QAPAIAGGGTDKAAAEAAILKQLDPAR--GALAYATLYQAEKKFTEA 194


>gi|166364168|ref|YP_001656441.1| periplasmic protein [Microcystis aeruginosa NIES-843]
 gi|166086541|dbj|BAG01249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
          Length = 363

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 63/202 (31%), Gaps = 6/202 (2%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQI 149
           L+ + A     A    +          +  V  L  Q         Y  A    E    +
Sbjct: 10  LVGLLAGGCFSASIAIADNPAGAIVSKDSQVNELLRQARQLVKNGNYGEAIAIYERAAAL 69

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                     + F   R GD N+A +   KAL + P  P    A+        ++  A T
Sbjct: 70  DGNNAKIFSGIGFLQTRQGDYNAAAQAYQKALSLDPSNPDFFHALGYSLANIGDYDNAAT 129

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                 +   +  ++     +   +    + +   +       L L  N+  A     K+
Sbjct: 130 AYYYAIQIEPKNVQH----YLGLGVVLLRQKNYAKAGEVYQWVLALDPNNQQAHEIMGKA 185

Query: 270 LISQNKKRKAEVILEKIWKVNP 291
           LI QNK  +A   L+K  +  P
Sbjct: 186 LIEQNKSSEALDFLQKSLQRFP 207


>gi|238902619|ref|YP_002928415.1| cellulose synthase subunit [Escherichia coli BW2952]
 gi|238860134|gb|ACR62132.1| cellulose synthase subunit [Escherichia coli BW2952]
          Length = 1140

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 675



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398


>gi|293395960|ref|ZP_06640241.1| N-acetylglucosaminyl transferase [Serratia odorifera DSM 4582]
 gi|291421458|gb|EFE94706.1| N-acetylglucosaminyl transferase [Serratia odorifera DSM 4582]
          Length = 390

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 81/260 (31%), Gaps = 32/260 (12%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  AV  L  +    G  + A+             IS
Sbjct: 83  GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFSQLTDETDFRIS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W +AI    +  K  K+  R   A      +L+     D+ 
Sbjct: 143 -----ALQQLLVIHQATSDWQKAIDVAERLVKLGKDKQRIEIAHFYCELALQAMGSDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIAN 297
            +      +          SI   +  ++Q +  KA   L+      K       P +  
Sbjct: 198 KAMSLLKRAASADKQCARVSIMFGRIYMAQGEFGKAVESLKRVLDQDKELVSETLPMLHE 257

Query: 298 IYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            Y  L  L       LKR     E N  +  + +++++I  +    +         ++  
Sbjct: 258 CYEQLPQLQGAWAEFLKRC---VEENTGAT-AELMLAEIIEQHEGREVVQVYINRQLQRH 313

Query: 356 PRKEI-FLLL----AQIEQA 370
           P   + + L+    A  E  
Sbjct: 314 PTMRVFYHLMDYHLADAEDG 333


>gi|291439358|ref|ZP_06578748.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342253|gb|EFE69209.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 481

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 83/265 (31%), Gaps = 39/265 (14%)

Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           ++ A + L   L+  P     A+  L   +    D   A+R+  +A  + P        +
Sbjct: 122 WSRAEKALRTSLKVRPKGNARALRGLAALANARRDYAGARRWGEEARKLEPKRWTTYPLL 181

Query: 195 VQQYVLAKEWSRAITFLNQ--KKKNAKEWN------------RNRAILLIARSLENA--- 237
           ++      +   A   L++    ++  E              R  A + +A ++  A   
Sbjct: 182 IEACTGLGDHKAAGDMLDRLAALRSGPEVMARAAAVYRDRGWREDAAVQLADAVSAAGEP 241

Query: 238 ---------------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                          ++GD   +     E++++  +   A     ++L +  +  +A   
Sbjct: 242 AERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALTA 301

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL------RLEEINKESVESLVIVSKIAL 336
                   P PE A     L       K  RA       R+        +  +++ +   
Sbjct: 302 YRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLVLGRFEA 361

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361
           + G  + A  +     +  P  E+ 
Sbjct: 362 DHGDAEAAVRRLRAEWERQPSTEVA 386



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 78/298 (26%), Gaps = 40/298 (13%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------I 149
              +   A  M   ++   +         +  + A   R      +    +         
Sbjct: 187 GLGDHKAAGDMLDRLAALRSGPE------VMARAAAVYRDRGWREDAAVQLADAVSAAGE 240

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           PA R   +      +   GD   A R   +A+ I PD         +        + A+T
Sbjct: 241 PAERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALT 300

Query: 210 FLNQKK--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASIC 265
                   +   E+      L  +       +              +    ++ +     
Sbjct: 301 AYRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLV----- 355

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKES 324
             +          A   L   W+  P  E+A+          + +  R+   L    + +
Sbjct: 356 LGRFEADHGDAEAAVRRLRAEWERQPSTEVADAL-----GWALHRAGRSEEALPFALRAT 410

Query: 325 VESLVIVSKIAL----------EMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQ 369
            E      + AL          E+G    A      A++I P      + L  A +E+
Sbjct: 411 DEGRGGGVRSALYVFHRGMIEREVGRDGAARRHLRQALQINPYFSPLRVPLAKAALER 468


>gi|162454220|ref|YP_001616587.1| TPR domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161164802|emb|CAN96107.1| TPR domain protein [Sorangium cellulosum 'So ce 56']
          Length = 449

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 16/169 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWN 222
           D  SAQR A +AL I+PD       + + +   +    A+  L                +
Sbjct: 195 DTGSAQRIAQEALKINPDYRPAMVIIARDHYRNRRLDLALYALQAILDGFEPVSENPPRD 254

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           R+ A  L+ R L   ++G   A+  +   ++    + + A +  A  L+     ++A  +
Sbjct: 255 RDNAEALLLRGLIYREQGQRAAALEEFRRAVTRRPDLVEARVQLATYLLEAGNAQEALPL 314

Query: 283 LEKIWK-----VNPHPEIANIYTHLLSENTVGK-----LKRALRLEEIN 321
           LE   +     +  H  + + Y  L       +     L R   L +++
Sbjct: 315 LEGAVRFDSEHLAAHLNLGDAYRLLERYADAKREFDWVLARDPNLAQVH 363



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 84/279 (30%), Gaps = 28/279 (10%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A A      A  +     Q       A YSL     R+ D  +   Y  +A  I PD   
Sbjct: 89  AFATGDLVNARAQFGQATQADPRAHQAFYSLGVVQERLRDAGAGASY-RQAFTIVPDYEP 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A         +   A   LN+K+    +     A L   +SL+     D  ++   A
Sbjct: 148 AIIAYAMLLARKNQLGEAERLLNEKRGQMPKSAAVAATLAEVKSLQR----DTGSAQRIA 203

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPE-------IA 296
            E+LK+  +   A +  A+      +   A   L+ I         NP  +       + 
Sbjct: 204 QEALKINPDYRPAMVIIARDHYRNRRLDLALYALQAILDGFEPVSENPPRDRDNAEALLL 263

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +         L+   R      + VE+ V ++   LE G+  +A      A++   
Sbjct: 264 RGLIYREQGQRAAALEEFRRAVTRRPDLVEARVQLATYLLEAGNAQEALPLLEGAVRFDS 323

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395
                 L          N        +    A  +  W+
Sbjct: 324 EHLAAHL----------NLGDAYRLLERYADAKREFDWV 352


>gi|325107155|ref|YP_004268223.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324967423|gb|ADY58201.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 368

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 4/157 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q       Y +A  + +  +    T    +Y+L   + + GD  +A+ Y  +AL++ P
Sbjct: 38  SGQAYYKHGNYTLAKREFQKAVMDDPTNPHYMYNLATATQKNGDFATAEYYYRQALNLDP 97

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   +      A     A   L+    +        A   I  +     +GD + +
Sbjct: 98  SHQPSYHGLATMMADAGRGMEAEQLLSAWAGSQPYL----AEPHIELAWFQRTQGDYMGA 153

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                ++L++      A     +   SQ + ++A  +
Sbjct: 154 EQSLRQALQINPQHERAIAQLGQVYESQGRGQEAMSL 190


>gi|331655157|ref|ZP_08356156.1| cellulose synthase operon protein C [Escherichia coli M718]
 gi|331047172|gb|EGI19250.1| cellulose synthase operon protein C [Escherichia coli M718]
          Length = 1157

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++  +N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKTNNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKTNNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|284052245|ref|ZP_06382455.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 672

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 109/318 (34%), Gaps = 64/318 (20%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESCRIGDLNSAQRYATKALDIS 184
               + ++  A       L+I       VY     LY E     D   A      AL ++
Sbjct: 50  AYQKQGEFEPALIAYTKALEIKP-DFGEVYGNLGSLYAEHKLWEDAVQAYDV---ALRLN 105

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMI 243
           PD   +   + Q  ++  ++  AI+    ++  AK+ +  +A  L+  +L N +K     
Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAIS--YCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAE 163

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------N 297
           A+Y   +E    CD      +     L  Q   + A    +K  ++NP  E+A       
Sbjct: 164 AAYQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNA 220

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +     E  +   ++A+   +IN  +  S + + +  LE+G + +A A  + A+++ P 
Sbjct: 221 WFRLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNPN 277

Query: 358 K----------------------------------------EIFLLLA-QIEQANSHNTD 376
                                                     ++  L   + + +  + D
Sbjct: 278 SYWAHENLGDALSQNGCFSEAIPIYLQALQKVPEDKPGVSNSLYRQLGYAMREQSQADVD 337

Query: 377 KILYWTQSALHAMPDPLW 394
           K   W    +   PD  W
Sbjct: 338 KASQWLSEMISHPPDHNW 355



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 47/237 (19%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L ++    G+   A    TKAL+I PD   V   +   Y   K W  A+   +   +  
Sbjct: 48  GLAYQKQ--GEFEPALIAYTKALEIKPDFGEVYGNLGSLYAEHKLWEDAVQAYDVALRLN 105

Query: 219 KEW--------------------------------NRNRAILLIARSLENADK-GDMIAS 245
            +                                 +  +A  L+  +L N +K     A+
Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAEAA 165

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------NIY 299
           Y   +E    CD      +     L  Q   + A    +K  ++NP  E+A        +
Sbjct: 166 YQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNAWF 222

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                E  +   ++A+   +IN  +  S + + +  LE+G + +A A  + A+++ P
Sbjct: 223 RLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNP 276


>gi|53714714|ref|YP_100706.1| hypothetical protein BF3429 [Bacteroides fragilis YCH46]
 gi|265765822|ref|ZP_06093863.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16]
 gi|52217579|dbj|BAD50172.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|263253490|gb|EEZ24955.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16]
          Length = 283

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 8/167 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           + L    I L +   + A+    ++M +    T    + + Y    R  D   A+    +
Sbjct: 105 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 162

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L+I P        +        ++  A+  LNQ      E     A+L +AR+    D 
Sbjct: 163 LLEIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPE----DAVLYVARADVERDM 218

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +  D  E+++L  +SI A +      + Q KK  A+   EK 
Sbjct: 219 KHDDLALVDLDEAIRLAPDSIDAYLLRGDIYLDQKKKSLAKADFEKA 265



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 16/194 (8%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  K  +  N + A+L     L     G    +      +L +   ++   +  
Sbjct: 51  AEDLLKQALK-LEPKNAHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILLNR 109

Query: 267 AKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLE 318
           A   + Q  + KA         + +K  +      +   Y + L  +    +L    RL 
Sbjct: 110 AAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQRLL 164

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377
           EI+ ++    + ++ +  +     +A       +   P    +++  A +E+   H+   
Sbjct: 165 EIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPEDAVLYVARADVERDMKHDDLA 224

Query: 378 ILYWTQSALHAMPD 391
           ++     A+   PD
Sbjct: 225 LVD-LDEAIRLAPD 237


>gi|323189323|gb|EFZ74606.1| cellulose synthase operon protein C [Escherichia coli RN587/1]
          Length = 1157

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA    T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGETAAAQQ 692



 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        E + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGETAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|322434243|ref|YP_004216455.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9]
 gi|321161970|gb|ADW67675.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9]
          Length = 742

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 92/265 (34%), Gaps = 14/265 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A    +  L++ A    A  +L   S   G+ + A +   KAL++ P       A   
Sbjct: 414 DKAQAATKRALELDANCAPAYVTLARISTTGGNTSLALQQVAKALELEPLNAEAYAAKAD 473

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            +   +  + A   L+     A +  R   +L           G++  +        +L 
Sbjct: 474 VFAAERRDADAKEALSHAVDLAPDDWRFPVLLGNYE----FAAGNLQEAVTLYKRGAELA 529

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRA 314
            ++++A      +     +  +A+   EK  K+ P   I +    LLS        ++  
Sbjct: 530 PDNVIAFYNLGDTQEKLGQLGEAQASFEKALKIEPRFAIYSALGGLLSLEGKHAEAIRMG 589

Query: 315 LRLEEINKESVESLVIVSKIAL--------EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            +  E+N     +   +++  L         M +  +A   A  A   +PR    L+   
Sbjct: 590 QKAVELNPGDYNTRQNLAEAYLWSPGGREQAMATYREAIGLAEHARLTSPRDPALLISLA 649

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
              A + +  K L   + +L   PD
Sbjct: 650 YAYALTGDKGKSLPLIRQSLALSPD 674



 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 81/278 (29%), Gaps = 55/278 (19%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           + A     A    +         +++   +L      A      A    +   ++     
Sbjct: 474 VFAAERRDADAKEALSHAVDLAPDDWRFPVLLGNYEFAAGNLQEAVTLYKRGAELAPDNV 533

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A Y+L     ++G L  AQ    KAL I P    +  A+     L  + + AI    + 
Sbjct: 534 IAFYNLGDTQEKLGQLGEAQASFEKALKIEPRFA-IYSALGGLLSLEGKHAEAIRMGQKA 592

Query: 215 --------------------------------------KKNAKEWNRNRAILLIARSLEN 236
                                                  ++A+  +     LLI+ +   
Sbjct: 593 VELNPGDYNTRQNLAEAYLWSPGGREQAMATYREAIGLAEHARLTSPRDPALLISLAYAY 652

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           A  GD   S     +SL L  +    S+ A  +     ++ +A  ++ K         +A
Sbjct: 653 ALTGDKGKSLPLIRQSLALSPDDPDVSLRAGVTYEVLGQRAEALRLVAKA--------LA 704

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
             Y+ +  E+          L  +  +       ++K 
Sbjct: 705 GSYSPVWVEHNPE-------LAGLRSDPGFGA-ALAKA 734


>gi|299135117|ref|ZP_07028308.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
 gi|298590094|gb|EFI50298.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
          Length = 732

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A  + P AP     +       ++   A+    +    A       A LL AR LE  
Sbjct: 166 ERAATLHPSAPEAWIGLGDIACKNRDIKAALAHTQKALTLAP--KSAEACLLQARLLEMR 223

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                  +     ++L    + + A I  ++ L +  +  +   ILE+I + NP
Sbjct: 224 FL--HEEALIAIKQALAAAPDLVEADILRSRILFTAKRYSETIPILERIIRSNP 275



 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 88/263 (33%), Gaps = 37/263 (14%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A    Q +IA      +L     +    + L     + G+L    R  TKAL + P +P 
Sbjct: 16  AHRAGQLDIAASLYREVLTHDKKQFAPQHLLGVIEGQRGNLAEGIRQITKALRLDPKSPE 75

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               + +    A + S A     +  + +   N + A+     +           +   A
Sbjct: 76  AYLNLGRMQGEAGDLSNA----EKSLRKSISLNPSNALAYGNLAAVYRRMKRYEEAKTAA 131

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            ++L++  N  MA       LI++                            L       
Sbjct: 132 DQALRIDPNEWMA-------LINRGNA------------------------LLALNLLDD 160

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIE 368
                 R   ++  + E+ + +  IA +   I  A A    A+ +AP   E  LL A++ 
Sbjct: 161 AKADYERAATLHPSAPEAWIGLGDIACKNRDIKAALAHTQKALTLAPKSAEACLLQARLL 220

Query: 369 QANSHNTDKILYWTQSALHAMPD 391
           +    + + ++   + AL A PD
Sbjct: 221 EMRFLHEEALIA-IKQALAAAPD 242


>gi|115373252|ref|ZP_01460552.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310824551|ref|YP_003956909.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369698|gb|EAU68633.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309397623|gb|ADO75082.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 377

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 92/286 (32%), Gaps = 34/286 (11%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            A +    +S+  +   +  V LL    A+  + ++ A E  +++++ P+    A + L 
Sbjct: 46  RADQAEELLSRVKSEDTQGEVTLLRAAAAIQRKDFSRAREHYQVLIRQPSPPAEAWHGLG 105

Query: 162 FESCRIGDLNSAQRYATKALDISPD----------------------APWVTEAVVQQYV 199
                 G    A+    +A+ + P+                        +V    +    
Sbjct: 106 VALLAQGKAAEAREAHEQAVALKPNQSGFRFELGVALAMEKRPRAAVHQFVQGLRLDARD 165

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               W+ A   L Q+ K         A L      +   +G + A    ++++     + 
Sbjct: 166 ARAYWALA-QVLTQQGKVLLARRVLEAGLKQVPQSQLL-QGALSAGQDASVDAH-ATPDV 222

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIW----KVNPHPEI-ANIYTHLLSENTVGKLKRA 314
             A    A  L+++ + R+A  +L + W    +  P   + A     L   +  G  +  
Sbjct: 223 --ALFHQASMLLARKRGREALKLLREGWEHGTRSLPLKLLEAEACKDLQPPDMPGVFRAY 280

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAK--AMLAMKIAPRK 358
                   +  E    +    L+ G   +  A      A ++ P  
Sbjct: 281 EEAIAFAPDHWEPYTRLGVSLLKEGHRYEPRAIELLETARRLEPSM 326


>gi|294146975|ref|YP_003559641.1| cellulose synthase protein C precursor [Sphingobium japonicum
           UT26S]
 gi|292677392|dbj|BAI98909.1| cellulose synthase protein C precursor [Sphingobium japonicum
           UT26S]
          Length = 1125

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 34/228 (14%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-KEWNR 223
             +GD   A + A +ALD +P               A  +  A+  L Q  ++       
Sbjct: 426 LELGDARGAGQLAAQALD-APAND------------AGAYDAAVRVLAQTGQDGMAMSAV 472

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            +A  L   SL+       + +   A ++ ++                   +   A  +L
Sbjct: 473 QKASALAGPSLQGQRSLGNLKATLAAAQADRM---------------RQAGQFAPAFDLL 517

Query: 284 EKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +  W   P + EI +    L           +    L        +++V +   A   G 
Sbjct: 518 QAAWNDAPGNEEILSALARLYQSGGLNAQAAQTFRMLLAQKPADRDAMVGLIDTASASGD 577

Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYW-TQSAL 386
           ++ A A A  A++  P    +++  A++ Q    + D   Y  T  AL
Sbjct: 578 METARAVAQQAIQTHPADYRVYMAAARMAQTRGSDGDAARYLKTARAL 625



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 42/343 (12%), Positives = 89/343 (25%), Gaps = 44/343 (12%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-----VYLLEVQIALA-- 132
             D+G  A   G  ++ A  +  A          +    + L     V L + + A A  
Sbjct: 116 RTDRGGDARAAGFRALEAGQLDSAAARFRAALSANPNDADALGGMGIVRLRKSEFAQARD 175

Query: 133 ----------ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
                       ++  A +       + + R         ++ RI     A         
Sbjct: 176 LLTRASRIGGAGKWAEALQSARFYADLDSARTALDKGDLAQAERI-----ATALTQSDFR 230

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
               A  V  +V ++      ++ A     Q  K        +A      +    D GD 
Sbjct: 231 DKGPAVSVLASVYERQ---GRYNEAAELYRQLGKAGAGAATAQASATRNEARAALDAGDA 287

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYTH 301
             +      ++    +    +   A  L  Q +  + + ++ +  +     P    +Y  
Sbjct: 288 ARAEQLLRAAMGNAPDDPWVAYDLAGLLQQQGRVAEQDALVRQLSYSEKAEP----LYAA 343

Query: 302 LLSENTVGKLKRALRLEEINKE---SVESLVIVS----KIALEMGSIDQAHAKAMLA--- 351
            L  +  G+   A  +     E   + E    ++       +       A          
Sbjct: 344 ALILDRAGRTGDAQAVAARIPEGQRTAEMRNFIAGLGISATIAQAKAAGARGAQGQGLAM 403

Query: 352 MKIAPRKEIFLL--LAQIEQA--NSHNTDKILYWTQSALHAMP 390
           ++ A          +  + Q      +          AL A  
Sbjct: 404 LRQASEMRGLSADRMGALAQGMLELGDARGAGQLAAQALDAPA 446



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A     A  +          + E L  L   ++  +      A +   M+L        A
Sbjct: 507 AGQFAPAFDLLQAAWNDAPGNEEILSAL--ARLYQSGGLNAQAAQTFRMLLAQKPADRDA 564

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD 186
           +  L   +   GD+ +A+  A +A+   P 
Sbjct: 565 MVGLIDTASASGDMETARAVAQQAIQTHPA 594


>gi|262304953|gb|ACY45069.1| acetylglucosaminyl-transferase [Abacion magnum]
          Length = 288

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 74/185 (40%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   + +       A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLSPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++  +   A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYTEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIPGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYKTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +    H + L  L    I   +     A       L++      A 
Sbjct: 34  GQVAEAEECYNTALRLSPTHADSLNNL--ANIKREQGYTEEATRLYLKALEVFPDFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIPGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAITSYKTALKLKPDFPDAYCNLAHCL 200



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 52/176 (29%), Gaps = 6/176 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A E     L++  T   ++ +L       G    A R   KAL++ PD
Sbjct: 27  ANALKEKGQVAEAEECYNTALRLSPTHADSLNNLANIKREQGYTEEATRLYLKALEVFPD 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIPGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                ++++      A    A          +A    +   K+   P+  + Y +L
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYKTALKLK--PDFPDAYCNL 196



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G +  A+     AL +SP        +            A     +  +   
Sbjct: 26  LANALKEKGQVAEAEECYNTALRLSPTHADSLNNLANIKREQGYTEEATRLYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    A      +     +G +  +     E++++      A      +L        A
Sbjct: 86  DF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIPGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A+I  H  S N    +       ++  +  ++   ++
Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAITSYKTALKLKPDFPDAYCNLA 197


>gi|220934718|ref|YP_002513617.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996028|gb|ACL72630.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 397

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 36/306 (11%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P      R  A+  L  +  + G L+ A+    + ++       
Sbjct: 83  GEVDRAIRIHQNLIARPNLEPRQRANALLELGRDYMKAGVLDRAEGLFRELINTGYLEAE 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
               +   Y   KEW RAI      ++ + E      A        +    GD   +   
Sbjct: 143 AYGRLRALYEQEKEWERAIWAAEHLRRFSAEPQYEHIAHYHCELGEQAFRNGDPARAASH 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIA-------- 296
           A ++L    N   ASI      +++   R+A      +LE+      HP+ A        
Sbjct: 203 ARKALSSDRNCARASILLGDLAVAEQDDRQALKHFSRVLEQ------HPDFAILVLDRVR 256

Query: 297 NIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y  L       +      L  +   ++ ++ ++    AL     +    + +      
Sbjct: 257 AAYARLNDNTGYERF-----LARLREPDACQTTLLAHIDALHAEGREAEVDQLIDHELSR 311

Query: 356 PRKEIFLLLAQIE-QANSHNTDKILYWTQSALHAMPD-----PLWIS-DDGYLSSVWLPL 408
            +  +  L A ++ Q+              A HA+       PL+     G+ S      
Sbjct: 312 GKLTLPALQAYLKIQSGRAEDTAAGEVLNRAAHALEHYLQLRPLYRCNHCGFSSRSHFWC 371

Query: 409 SPISKT 414
            P    
Sbjct: 372 CPGCHQ 377


>gi|148264413|ref|YP_001231119.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146397913|gb|ABQ26546.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 860

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 18/264 (6%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L+ +I L E++Y  A +  + +  I P                + D + A   A + + I
Sbjct: 602 LKGRIYLQEKKYKDAIKVFDDIEAISPD---LGFRLKIDTCVVMKDFSKAVAQARRFITI 658

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P++ +    +   Y        A+  +    +   +    +AIL++      A KGD  
Sbjct: 659 KPNSAYGYMVLASVYERQNNVDHALDEVKNGLR--GDGKNVQAILMLGNL--YAKKGDNN 714

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILEKIWKVNPH-PEIANI 298
           ++     E++    +   A       L +   KR+A       LEK     P    +A +
Sbjct: 715 SAMKAFEEAVSKKPDFAPAYFAQGALLDAAGNKREAIKKYREALEKSEDFVPALNNLAYL 774

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y      +    ++ A+   +++  +   +  +  + L+ G   +A      A ++ P  
Sbjct: 775 YADGYG-SKQDAVRLAVTAFKLDSGNPAIMDTLGYVLLKNGRNAEALKLLERAARLLPAD 833

Query: 359 EIFL--LLAQIEQANSHNTDKILY 380
                 LLA  +   + +  K   
Sbjct: 834 ANVRNHLLAAFKA--NGDQSKTKQ 855



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 4/125 (3%)

Query: 127 VQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDI 183
            Q AL         A +K    L+       A+ +L Y  +   G    A R A  A  +
Sbjct: 736 AQGALLDAAGNKREAIKKYREALEKSEDFVPALNNLAYLYADGYGSKQDAVRLAVTAFKL 795

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDM 242
               P + + +    +     + A+  L +  +    + N    +L   ++  +  K   
Sbjct: 796 DSGNPAIMDTLGYVLLKNGRNAEALKLLERAARLLPADANVRNHLLAAFKANGDQSKTKQ 855

Query: 243 IASYH 247
             + H
Sbjct: 856 QQTLH 860


>gi|197123887|ref|YP_002135838.1| hypothetical protein AnaeK_3496 [Anaeromyxobacter sp. K]
 gi|196173736|gb|ACG74709.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
          Length = 638

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 70/209 (33%), Gaps = 11/209 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+GD   A+R   +AL   P +  V  A+          + A+  L           R R
Sbjct: 150 RLGDREGAERDLRRALAQRPSSGAVRIALGTLLRRRGAIAEAVALLEPAAAAGSNEERAR 209

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVIL 283
           A++ +  +   A +     +     +++      +   +  A++ +        +A  +L
Sbjct: 210 ALVALGAAHLAAGR--RAEAGRAFEQAVLYAPARVEIRLGVARAWLGGDAGDAERALSVL 267

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +   + P     H  +        + +  G  +   R   ++  +  +   V ++AL  
Sbjct: 268 ARAADLAPDVPAVHAALGRA--RERTGDDAGAAEAYERALRLDPSNRYARRRVLRLALAA 325

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               +A  +A   +   P       LA +
Sbjct: 326 RDFARARHEADRLVADGPEVAEHHFLAAL 354


>gi|167918851|ref|ZP_02505942.1| hypothetical protein BpseBC_09870 [Burkholderia pseudomallei
           BCC215]
          Length = 1451

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +          A+      
Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSAS-------PDAARAYLDR 826

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 947 LERRDDAIAA--LQRALE 962



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             R  D   A + A +A+ ++PD         +  +   ++  A++   + ++   +   +
Sbjct: 877  RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A L+ A +     + D IA+   A+E          A     +  +   +  KA  + +
Sbjct: 937  YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992

Query: 285  KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +   V  H E+A+        Y +L + +     L+RA    EI   + E+L  +  +  
Sbjct: 993  R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047

Query: 337  EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             +  + ++      A+ I     + + LA
Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076


>gi|224535852|ref|ZP_03676391.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522575|gb|EEF91680.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 317

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 10/231 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A    + + A +     L +       +  L     +   L+ A     +     PD   
Sbjct: 37  AQRMGRPDYAIKCFTEALALQE-DFETMSYLSQVYIQTNALSEAHELLERMAKQEPDHTS 95

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +     L +++   +    QK    +E N   A  L+ R+ +  D G  I S    
Sbjct: 96  TFLTLANVCYLQEDYQE-MADAAQKAIEIEEGNAM-AHYLLGRAKQGMDDG--IMSIAHL 151

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            +++ L D+   A +  A++LI   + ++A   ++ I   +P  E A +      +   G
Sbjct: 152 TKAIVLKDDFTEARLLRAEALIKMQQYKEATEDIDAILSQDPDEE-AALLLRGKVKEAAG 210

Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + + A      + E+N  + ++ + + ++ +      +A A    A+++ P
Sbjct: 211 QQEEAETDYRYVTELNPFNEQAFLCLGQLYIVQKKYPEAIALFDEAIELNP 261


>gi|167845602|ref|ZP_02471110.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
           B7210]
 gi|254197877|ref|ZP_04904299.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
 gi|169654618|gb|EDS87311.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
          Length = 1451

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +          A+      
Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSAS-------PDAARAYLDR 826

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 947 LERRDDAIAA--LQRALE 962



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154
            H+  LA +      Q     ++    LL  ++AL    ++ A  + E + +         
Sbjct: 880  HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 937

Query: 155  FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
              +        R  D  +A +   +AL+++   P      VQ Y+  +++ +A+     +
Sbjct: 938  ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 992

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +          A  +      N    D   +      +L++  ++  A       L   +
Sbjct: 993  RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 1050

Query: 275  KKRKAEVILEKI 286
            +  ++E +L + 
Sbjct: 1051 RLAESEEVLRRA 1062



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%)

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             ++A+ Y  +A+ + PD               ++   A    +  +  A + + +   L 
Sbjct: 817  PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 872

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            +AR        D   +   A  +++L  +   A +  A+  +      +A    E+    
Sbjct: 873  LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 927

Query: 290  NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
               P+    Y +L          ++ +  L+RAL L   +  ++ + V   +  L     
Sbjct: 928  EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 984

Query: 342  DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            D+A   A   +           +  +   N    D+     + AL   P
Sbjct: 985  DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 1033


>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
           bacterium 560]
          Length = 723

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 89/262 (33%), Gaps = 15/262 (5%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF 155
           +  I  A      +++   F NE L+Y +         Q ++A +  E  +   P   E 
Sbjct: 24  SGKINEAIDAIKVLTKD--FPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEV 81

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
             Y+L      +G L++A +     L ++P+       +       ++   A+    +  
Sbjct: 82  N-YNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAI 140

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               ++    A   +  +L+    G +  +     +++ +  +          +L    +
Sbjct: 141 AIKPDY--AEAHNNLGNALKEL--GQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQ 196

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVI 330
             +A    E+   +    + +N Y +L +           +K   +   I  +  E+   
Sbjct: 197 LDEAVKSYEQAIAIQS--DFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNN 254

Query: 331 VSKIALEMGSIDQAHAKAMLAM 352
           +      +G +D+A      A+
Sbjct: 255 LGNALQGLGQLDEAVKSYEQAI 276



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 25/236 (10%)

Query: 134 RQYNIAHEKLE-MMLQIPATREF------AVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q ++A +  E  +   P   E       A+  L       G L+ A +   +A+ I  D
Sbjct: 161 GQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGL-------GQLDEAVKSYEQAIAIQSD 213

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +      +++   A   +  +L+    G +  + 
Sbjct: 214 FSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYD--EAHNNLGNALQGL--GQLDEAV 269

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301
               +++ +  +   A       L    +   A    +K   + P     H  +      
Sbjct: 270 KSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAVRSYKKAIVIKPDYAKAHNNLGIALQD 329

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           L   +T   +K   +   I  +  E+   +     ++G ID A      A+ I P 
Sbjct: 330 LGQMDTA--VKNLEKAIAITPDFAEAHHNLGIALQDLGQIDAAVKGYEKAIAIKPD 383



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 11/229 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            Q + A +  E +L +      A  +L      +  L++A +   KA+ I PD       
Sbjct: 93  GQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDYAEAHNN 152

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +   A+    +      ++        +  +L+    G +  +     +++
Sbjct: 153 LGNALKELGQLDVAVKSYEKAIAIKPDF--AETHNNLGNALQGL--GQLDEAVKSYEQAI 208

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308
            +  +   A       L    +   A    EK   + P     H  + N    L   +  
Sbjct: 209 AIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEA 268

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +K   +   I  +   +   +  +  E+G +D A      A+ I P 
Sbjct: 269 --VKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAVRSYKKAIVIKPD 315


>gi|332980817|ref|YP_004462258.1| hypothetical protein Mahau_0218 [Mahella australiensis 50-1 BON]
 gi|332698495|gb|AEE95436.1| Tetratricopeptide TPR_1 repeat-containing protein [Mahella
           australiensis 50-1 BON]
          Length = 230

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 43/198 (21%)

Query: 61  VSRFFLSCPAMLFHMLHKRNYDK----GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
           + + F      L+   +K+         Y  L  G++ +   +   A ++   V ++   
Sbjct: 11  MLQAFFKRSEKLYTWFYKQAVKHHTTNAYALLSYGIIKLNEGDYQTADELFKQVLKKKKL 70

Query: 117 H---------NEYLVY-----------LLEV--QIAL-------------AERQYNIAHE 141
           +         +  L             +LE   Q                 +  Y  A  
Sbjct: 71  NWTIDKIARVDRALTQWKLGNLDRAIEILEAVCQEYERADSFATLAYFYILKGDYEKAAL 130

Query: 142 KLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
             E  L+       A+  Y   +   R GD   A+ Y  KALD  P+ P     +     
Sbjct: 131 YNEKALEEEEDHPPALDNYGQMY--YRQGDYEKAKEYFQKALDKKPNLPDSLYYMGCIAA 188

Query: 200 LAKEWSRAITFLNQKKKN 217
                  A+ +LN+  ++
Sbjct: 189 EQGRRDEALEYLNKALQS 206



 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 16/165 (9%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW-----SRAITFLNQKKKNA 218
               GD  +A     + L       W  + + +      +W      RAI  L    +  
Sbjct: 48  KLNEGDYQTADELFKQVLKKK-KLNWTIDKIARVDRALTQWKLGNLDRAIEILEAVCQ-- 104

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E+ R  +   +A       KGD   +     ++L+  ++   A     +    Q    K
Sbjct: 105 -EYERADSFATLAY--FYILKGDYEKAALYNEKALEEEEDHPPALDNYGQMYYRQGDYEK 161

Query: 279 AEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINK 322
           A+   +K     P+ P+      + +      + +R   LE +NK
Sbjct: 162 AKEYFQKALDKKPNLPDS----LYYMGCIAAEQGRRDEALEYLNK 202


>gi|90424611|ref|YP_532981.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisB18]
 gi|90106625|gb|ABD88662.1| TPR repeat [Rhodopseudomonas palustris BisB18]
          Length = 767

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 74/250 (29%), Gaps = 13/250 (5%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
            +    ++ L+ L    I   + +   A       + I  +      +L     +     
Sbjct: 170 ARDPTSHDALLNL--GNILQDQGKRAEAIGIYRRAVAIEPSFAAGHRNLALALAQHQQPE 227

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A +   +A+ + P+      A+ +        + A+         A +       +L  
Sbjct: 228 AALQACHRAIALQPEVVESHMALAEILEGLGRTAEALASYRDALALAPD----ETAVLCQ 283

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +          +   A  +L+   N   A      +L S ++  +A     ++  ++P
Sbjct: 284 IGIALHRLDQFAEAIDVATAALRSAPNHADAVKLLGLALYSSDRFAEALDAYRRLSALDP 343

Query: 292 -HP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            +P    +I      L   +    +        I  +    L  +  I    G  + + A
Sbjct: 344 ENPAVLNDIGACLFKLERYDAA--IAACESAIAIKPDHAPGLTNLGIIFEARGEFEASAA 401

Query: 347 KAMLAMKIAP 356
               A+   P
Sbjct: 402 MLRRAIAADP 411



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 71/237 (29%), Gaps = 48/237 (20%)

Query: 167 IGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            GD  +      ++   + P        +     L  E   A+    Q          N 
Sbjct: 52  AGDRAAQGAALLSRVFGLDPGNAHAYATLGDALALKGEREGAVAAFQQ----GAALRPNH 107

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI-------------- 271
           A L +  +    D G +  +      ++ L  ++  A    A+ L               
Sbjct: 108 AGLHLKLAAALQDLGRLDEAAATCRRAVALDPDATQARFRLARILTAQRDMAAAADAYRA 167

Query: 272 --------------------SQNKKRKAEVILEKIWKVNP-----HPEIANIYT-HLLSE 305
                                Q K+ +A  I  +   + P     H  +A     H   E
Sbjct: 168 LIARDPTSHDALLNLGNILQDQGKRAEAIGIYRRAVAIEPSFAAGHRNLALALAQHQQPE 227

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             +    RA+ L     E VES + +++I   +G   +A A    A+ +AP +   L
Sbjct: 228 AALQACHRAIAL---QPEVVESHMALAEILEGLGRTAEALASYRDALALAPDETAVL 281


>gi|291415216|ref|XP_002723850.1| PREDICTED: PRP6 pre-mRNA processing factor 6 homolog [Oryctolagus
           cuniculus]
          Length = 937

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 104/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 575 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 632

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILL------IARSLE 235
            +P++  +  A V+      E+ RA   L + + +A       +++ L       A + E
Sbjct: 633 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGDTAAAQE 692

Query: 236 NADK----------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +++                      G    +     + LK C +S    +  ++     
Sbjct: 693 LSEEALRHYEDFAKLWMMTGQMQEQQGLTEKARDAYTQGLKKCPHSTPLWLLLSRLEEKI 752

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S V+ 
Sbjct: 753 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 810

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 811 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 868

Query: 391 D 391
           D
Sbjct: 869 D 869



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 284 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 340

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 341 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 392

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 393 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 445

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 446 RKVLNKARENIPTDRHIWVTAAKLEEA-NGNTQMVEKIIDRAITSLR 491


>gi|87309637|ref|ZP_01091771.1| hypothetical protein DSM3645_02458 [Blastopirellula marina DSM
           3645]
 gi|87287401|gb|EAQ79301.1| hypothetical protein DSM3645_02458 [Blastopirellula marina DSM
           3645]
          Length = 840

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 91/305 (29%), Gaps = 57/305 (18%)

Query: 128 QIALA---ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           Q A           A      +L   +    A++ L       G    A  +  +A++I 
Sbjct: 19  QAAFQLHRAGDLAAAERTYRQILIDTSKDLNALHLLGLNLHEQGKDREAVVFLEQAVEIG 78

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLI----------- 230
           P    +  ++    +   +   A +   +        +E  RN A + +           
Sbjct: 79  PTIGVLYNSLGVARMALGDLRIAESCFRKAISLDSACEEARRNLAAVSLKLQGQTSVPKS 138

Query: 231 --ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
             A S      GD   +     + L    + + A I  A+  + + K R+   +L +  +
Sbjct: 139 PEASSRSTVAIGDSEQAEQILRQRLGEFPDDLNAYIKLARHWMERGKTREVIDLLSEPVE 198

Query: 289 VNPHP-EIANIYTHL-----LSENTVGKLKR----------------------------- 313
             P   E+AN +          E      KR                             
Sbjct: 199 RFPQSVELANCFGEAFGQENRHEEAEQIFKRLLERFPENVTAHVNYGVSQLAQERASEAV 258

Query: 314 --ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQA 370
               R  E+N E   + ++++    +    D A      A+++ P     L+ LA +E+ 
Sbjct: 259 TSFERALELNPEFFRAYLLIAVSRRQSQQFDAAEMALQRALELRPGSSEALVELAHLERL 318

Query: 371 NSHNT 375
             +  
Sbjct: 319 RGNPQ 323


>gi|124022005|ref|YP_001016312.1| hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962291|gb|ABM77047.1| Hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
           9303]
          Length = 1676

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 99/275 (36%), Gaps = 19/275 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148
           GL++    ++  A ++             Y + L    I       + A       L+  
Sbjct: 108 GLIAKRQGDLFAAEQLVKRACDLDQSFAPYHMNL--GGIYKDLGNLDQALASTLKSLELQ 165

Query: 149 -IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
               T    +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A
Sbjct: 166 PDNPTAHMNLGGIYK---DLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQA 222

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +    +  +   +        LI       D G++  +    ++SL+L  ++  A +   
Sbjct: 223 LASTLKSLELQPD----NPTALINLGGIYKDLGNLDQALASTLKSLELQPDNPTAHMNLG 278

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322
                     +A     K  ++ P     H  +  IY  L + +    L   L+  E+  
Sbjct: 279 GIYQDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQA--LASTLKSLELKP 336

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           ++  + + +  I  ++G++DQA A  + ++++ P 
Sbjct: 337 DNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPD 371



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 96/267 (35%), Gaps = 19/267 (7%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREF 155
             L + + S +       +    ++    I       + A       L+     P T   
Sbjct: 591 GNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPDT-LI 649

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A+    +  
Sbjct: 650 NLGGIYK---DLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSL 706

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +   +        LI       D G++  +    ++SL+L  ++  A +           
Sbjct: 707 ELKPD----NPTALINLGGIYQDLGNLDQALASTLKSLELKPDNPTAQMNLGGIYKDLGN 762

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             +A     K  ++ P     H  +  IY  L + +    L   L+  E+  ++  + + 
Sbjct: 763 LDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQA--LASTLKSLELKPDNPTAHMN 820

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  I  ++G++DQA A  + ++++ P 
Sbjct: 821 LGGIYKDLGNLDQALASTLKSLELKPD 847



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 107/304 (35%), Gaps = 47/304 (15%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---YLLEVQIALAERQYNIAHEKLEMMLQ 148
           L+++       A++  +   Q  T   E +     +        +     A    +  L 
Sbjct: 43  LLAL--GQPEKAQQCLAKAHQLDTTDPETIKDIGNIFNA----LQND-AEAIRLYKAALL 95

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTEAVVQQYVLAKEW 204
           I      A+ +L   + R GDL +A++   +A D+    +P    +         L +  
Sbjct: 96  INQNYAPAINNLGLIAKRQGDLFAAEQLVKRACDLDQSFAPYHMNLGGIYKDLGNLDQAL 155

Query: 205 SRAITFLNQK-----------KKNAKEWNRNRAILLIARSLENA---------------D 238
           +  +  L  +                  N ++A+    +SLE                 D
Sbjct: 156 ASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKD 215

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HP 293
            G++  +    ++SL+L  ++  A I             +A     K  ++ P     H 
Sbjct: 216 LGNLDQALASTLKSLELQPDNPTALINLGGIYKDLGNLDQALASTLKSLELQPDNPTAHM 275

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +  IY  L + +    L   L+  E+  ++  + + +  I  ++G++DQA A  + +++
Sbjct: 276 NLGGIYQDLGNLDQA--LASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLE 333

Query: 354 IAPR 357
           + P 
Sbjct: 334 LKPD 337



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 97/266 (36%), Gaps = 17/266 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156
             L + + S +       +     +    I       + A       L+      T    
Sbjct: 659 GNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTALIN 718

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A+    +  +
Sbjct: 719 LGGIY---QDLGNLDQALASTLKSLELKPDNPTAQMNLGGIYKDLGNLDQALASTLKSLE 775

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +       L         D G++  +    ++SL+L  ++  A +            
Sbjct: 776 LKPDNPTAHMNL----GGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNL 831

Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +A     K  ++ P +P+    +  IY  L + +    L   L+  E+  ++ ++L+ +
Sbjct: 832 DQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLINL 889

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
             I  ++G++DQA A  + ++++ P 
Sbjct: 890 GGIYKDLGNLDQALASTLKSLELKPD 915



 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 98/268 (36%), Gaps = 19/268 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154
            N+  A        +    +   L+ L    I       + A       L+      T +
Sbjct: 693 GNLDQALASTLKSLELKPDNPTALINL--GGIYQDLGNLDQALASTLKSLELKPDNPTAQ 750

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A+    + 
Sbjct: 751 MNLGGIYK---DLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKS 807

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +   +       L         D G++  +    ++SL+L  ++    I          
Sbjct: 808 LELKPDNPTAHMNL----GGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLG 863

Query: 275 KKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
              +A     K  ++ P +P+    +  IY  L + +    L   L+  E+  ++ ++L+
Sbjct: 864 NLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLI 921

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +  I  ++G++DQA A  + ++++ P 
Sbjct: 922 NLGGIYKDLGNLDQALASTLKSLELKPD 949



 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 83/218 (38%), Gaps = 14/218 (6%)

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +     T    +  +Y     +G+L+ A     K+L++ PD P     +   Y      
Sbjct: 265 ELQPDNPTAHMNLGGIY---QDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNL 321

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            +A+    +  +   +       L         D G++  +    ++SL+L  ++    I
Sbjct: 322 DQALASTLKSLELKPDNPTAHMNL----GGIYQDLGNLDQALASTLKSLELKPDNPDTLI 377

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319
                        +A     K  ++ P     H  +  IY  L  +N    L   L+  E
Sbjct: 378 NLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDL--DNLDQALASTLKSLE 435

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  ++ ++L+ +  I  ++G++DQA A  + ++++ P 
Sbjct: 436 LKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPD 473



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 101/272 (37%), Gaps = 17/272 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156
             L + + S +       +    ++    I       + A       L+      T    
Sbjct: 455 GNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 514

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A+    +  +
Sbjct: 515 LGGIY---QDLGNLDQALASTLKSLELQPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 571

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +        LI       D G++  +    ++SL+L  ++  A +            
Sbjct: 572 LKPDNPD----TLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNL 627

Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +A     K  ++ P +P+    +  IY  L + +    L   L+  E+  ++ ++L+ +
Sbjct: 628 DQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLINL 685

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             I  ++G++DQA A  + ++++ P     L+
Sbjct: 686 GGIYKDLGNLDQALASTLKSLELKPDNPTALI 717



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 100/267 (37%), Gaps = 19/267 (7%)

Query: 100  IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREF 155
              L + + S +       +     +    I       + A       L+     P T   
Sbjct: 829  GNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDT-LI 887

Query: 156  AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
             +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A+    +  
Sbjct: 888  NLGGIYK---DLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSL 944

Query: 216  KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +   +      ++ +    ++ D  D   +    ++SL+L  ++  A +           
Sbjct: 945  ELKPD--NPDTLINLGGIYKDLDNLD--QALASTLKSLELKPDNPTAHMNLGGIYKDLGN 1000

Query: 276  KRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              +A     K  ++ P +P+    +  IY  L + +    L   L+  E+  ++ ++L+ 
Sbjct: 1001 LDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLIN 1058

Query: 331  VSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +  I  ++G++DQA A  + ++++ P 
Sbjct: 1059 LGGIYKDLGNLDQALASTLKSLELKPD 1085



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 95/266 (35%), Gaps = 17/266 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156
             L + + S +       +     +    I       + A       L+      T    
Sbjct: 557 GNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 616

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A+    +  +
Sbjct: 617 LGGIY---QDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 673

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +        LI       D G++  +    ++SL+L  ++  A I            
Sbjct: 674 LKPDNPD----TLINLGGIYKDLGNLDQALASTLKSLELKPDNPTALINLGGIYQDLGNL 729

Query: 277 RKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +A     K  ++ P +P     +  IY  L + +    L   L+  E+  ++  + + +
Sbjct: 730 DQALASTLKSLELKPDNPTAQMNLGGIYKDLGNLDQA--LASTLKSLELKPDNPTAHMNL 787

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
             I  ++G++DQA A  + ++++ P 
Sbjct: 788 GGIYKDLGNLDQALASTLKSLELKPD 813



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 11/204 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G    AQ+   KA  +    P   + +   +   +  + AI          + +   
Sbjct: 44  LALGQPEKAQQCLAKAHQLDTTDPETIKDIGNIFNALQNDAEAIRLYKAALLINQNY--- 100

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A  +    L    +GD+ A+      +  L  +     +             +A     
Sbjct: 101 -APAINNLGLIAKRQGDLFAAEQLVKRACDLDQSFAPYHMNLGGIYKDLGNLDQALASTL 159

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K  ++ P     H  +  IY  L + +    L   L+  E+  ++  + + +  I  ++G
Sbjct: 160 KSLELQPDNPTAHMNLGGIYKDLGNLDQA--LASTLKSLELQPDNPTAHMNLGGIYKDLG 217

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363
           ++DQA A  + ++++ P     L+
Sbjct: 218 NLDQALASTLKSLELQPDNPTALI 241



 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 96/266 (36%), Gaps = 17/266 (6%)

Query: 100  IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156
              L + + S +       +    ++    I       + A       L+      T    
Sbjct: 761  GNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 820

Query: 157  VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            +  +Y     +G+L+ A     K+L++ PD P     +   Y       +A+    +  +
Sbjct: 821  LGGIYK---DLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 877

Query: 217  NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
               +        LI       D G++  +    ++SL+L  ++    I            
Sbjct: 878  LKPDNPD----TLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 933

Query: 277  RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
             +A     K  ++ P +P+    +  IY  L  +N    L   L+  E+  ++  + + +
Sbjct: 934  DQALASTLKSLELKPDNPDTLINLGGIYKDL--DNLDQALASTLKSLELKPDNPTAHMNL 991

Query: 332  SKIALEMGSIDQAHAKAMLAMKIAPR 357
              I  ++G++DQA A  + ++++ P 
Sbjct: 992  GGIYKDLGNLDQALASTLKSLELKPD 1017


>gi|71667321|ref|XP_820611.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi
           strain CL Brener]
 gi|70885962|gb|EAN98760.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma
           cruzi]
          Length = 472

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 13/105 (12%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A +A  +        +          +W  AI    +             ++L  R+   
Sbjct: 4   AEEADRLKNKGNEAFQ--------EGKWHHAIELYTEAL-----ALHKTPVILCNRAFAY 50

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                  A+  DA E+L+L    + A    A + +   K ++A  
Sbjct: 51  LKTELAGAALTDADEALRLDPGYVKAYYRKASAHLYLGKHKEALK 95


>gi|71660285|ref|XP_821860.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi
           strain CL Brener]
 gi|70887249|gb|EAO00009.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma
           cruzi]
          Length = 472

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 13/105 (12%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A +A  +        +          +W  AI    +             ++L  R+   
Sbjct: 4   AEEADRLKNKGNEAFQ--------EGKWHHAIELYTEAL-----ALHKTPVILCNRAFAY 50

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                  A+  DA E+L+L    + A    A + +   K ++A  
Sbjct: 51  LKTELAGAALTDADEALRLDPGYVKAYYRKASAHLYLGKHKEALK 95


>gi|21228903|ref|NP_634825.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1]
 gi|20907434|gb|AAM32497.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1]
          Length = 359

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 9/150 (6%)

Query: 134 RQYNIAHEKLEM-MLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +   A E  E  +L+ P   E  A       +        A    + AL I PD P   
Sbjct: 215 GRLEEALETYEKVLLRDPKYAEAWAGKGSVLSALDRK--EEALEAYSSALKIRPDYPEAL 272

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           +A          + +A++  +   + + E       L   R L  ++      +  +   
Sbjct: 273 KAAGNLLFKLGRYEKALSTYDMALQASPE----DPQLWAGRGLVLSELNKQEEALQNCNR 328

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +L+L      A     + L   +++ KAE 
Sbjct: 329 ALELKPGFNPALEIKVEILSRISRQ-KAEK 357



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 39/139 (28%), Gaps = 14/139 (10%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E+    D         +A+++ P    V +              A+    +      
Sbjct: 182 LLKEALDAYD---------RAIELEPSFEIVWDNKGVVLAGLGRLEEALETYEKVLLRDP 232

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    A     +    +       +      +LK+  +   A   A   L    +  KA
Sbjct: 233 KY----AEAWAGKGSVLSALDRKEEALEAYSSALKIRPDYPEALKAAGNLLFKLGRYEKA 288

Query: 280 EVILEKIWKVNPH-PEIAN 297
               +   + +P  P++  
Sbjct: 289 LSTYDMALQASPEDPQLWA 307


>gi|229160569|ref|ZP_04288564.1| hypothetical protein bcere0009_13610 [Bacillus cereus R309803]
 gi|228622979|gb|EEK79810.1| hypothetical protein bcere0009_13610 [Bacillus cereus R309803]
          Length = 434

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITHYESLLAEHKVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           + A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 DYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKVVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ V + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAVVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381


>gi|157812764|gb|ABV81127.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Narceus americanus]
          Length = 288

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   + +       A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLSPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++  +   A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGHTEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + GSI +A A    A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 53/178 (29%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G +  A+     AL +SP        +            A     +  +   
Sbjct: 26  LANALKEKGQVQEAEDCYNTALRLSPTHADSLNNLANIKREQGHTEEATRLYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    A      +     +G +  +     E++++      A      +L      + A
Sbjct: 86  DF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A+I  H  S +    +       ++  +  ++   ++
Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGSIPEAIASYRTALKLKPDFPDAYCNLA 197



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A +     L++  T   ++ +L       G    A R   KAL++ PD
Sbjct: 27  ANALKEKGQVQEAEDCYNTALRLSPTHADSLNNLANIKREQGHTEEATRLYLKALEVFPD 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYDQRMKKLVAIVADQLEKNRLPSVHPHH 236


>gi|194290488|ref|YP_002006395.1| protoheme ix synthesis protein [Cupriavidus taiwanensis LMG 19424]
 gi|193224323|emb|CAQ70334.1| protoheme IX synthesis protein [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 128/390 (32%), Gaps = 19/390 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +RL+ +  V+        + + +   +V + +       S  + L++L    F    + +
Sbjct: 1   MRLLFWVAVLFGGAVGLALFTQFNHSNVVLFYPPYRVELSLNLALALLLLIFFVVWTVMS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             R     P        +    K   AL   + ++ A     AR   +    Q       
Sbjct: 61  TIRHLAEMPRRAAAYRERSRMSKAQAALRESIENLFA--GRFARAERAAREAQSWDDQAQ 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+  + A   ++ +   +     +  P   +  + S+        D + A     + 
Sbjct: 119 TAALIGARAAHRMQETDR-RDAWMAQVTDPEREQARLVSMAELLVDARDADGALETIAQL 177

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                    V    ++ +   K WS     A +   +   +     R + + + A   E 
Sbjct: 178 QSQGARQIHVQRIALRAHQHLKNWSEVLRLARSLEKRNALHPVLALRLKQMAVEAMLEER 237

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               + ++ +  ++ + +     I  +  AA+   +  ++ +A  I+E   KVN    + 
Sbjct: 238 RHDAEALSEFWRSLSADERRATRI--AEPAARYFAALGRQNEARRIIEDALKVNWDSRLV 295

Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y    +  + + ++++A +    +    +    +  + L      +A +    A+K A
Sbjct: 296 LRYADCAVPGHALPQIQQAEKWLAAHPADADLYYTLGVLCLGEKLWGKAQSSFERALKYA 355

Query: 356 P-------RKEIFLLLAQI-EQANSHNTDK 377
                   R    L LA++ E+       +
Sbjct: 356 DPDQQRRLRVRTHLALARLFEETERFEDAQ 385


>gi|332307553|ref|YP_004435404.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174882|gb|AEE24136.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 918

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 2/108 (1%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +      + + A E  + +L++       + +    +   G+ + A   A KAL I P+
Sbjct: 779 AEYYAKNGEQDAASEYYQALLELIPEDFVTLNNYANLAIAQGNTSKAVELAQKALKIQPN 838

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           +P+  + +        ++S A+T++  KK +A+    N   L +   L
Sbjct: 839 SPYAMDTLGWALFHENKYSDALTYI--KKAHAELPKNNEVTLHLIELL 884



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 106/311 (34%), Gaps = 46/311 (14%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL+ +++ +      + S V   +T  NE    L   Q  +   +   A    +   
Sbjct: 400 LREGLVKLSSGDQSGIESLESAVELDNTL-NEAWSLL--AQAHMQANEPQKALAVAKRWQ 456

Query: 148 QIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +          L  ES    ++ D   A+    KAL + PD       ++      K +
Sbjct: 457 AVNEVD-----GLVLESYIYQQLNDDTQARGLLDKALSMEPDNFAAMRFLMLLNAREKRF 511

Query: 205 SRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261
           S A     +  K  +  +      + LI  ++   D   + + +   +   K  + S   
Sbjct: 512 SEARELAEKLIKTSDNLDGKYQLVLTLINIAIAQNDMASVESLFKSLLNEHKDEETSYTL 571

Query: 262 -ASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----------EIANIYTHLLSENTVG 309
              +  A     Q + +K+  +LE        P            +   Y+ +   N   
Sbjct: 572 QLKVGLATLYNYQGEYQKSLELLE--------PLDDSKDFFVLSALGETYSGMNDFNNAK 623

Query: 310 KLKRALRLEEINKESVESLV----IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                 RL ++      S V    +++K  L+  ++D A A+A LA+   PR  +  + A
Sbjct: 624 --ATFQRLIDVFPRDTRSWVQYVNLLNKFNLQRDAVDSA-ARAELAIPNDPRLTVLSIRA 680

Query: 366 -----QIEQAN 371
                 IE+A 
Sbjct: 681 LIRSKAIEKAQ 691


>gi|315186422|gb|EFU20182.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 305

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               +R + +Y        +   +     +  +   +Y+ A   LE +L+        + 
Sbjct: 42  EGDFSRAVGAYTQALRFSPHTPRIEYNLARTYIRTGEYDRAEALLEGLLERDPVNTMVLS 101

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L +     GD ++A+ +  +AL++SP    +   + +  +   + S A+ +  +  + +
Sbjct: 102 TLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARLRMEEGDVSAALAYAGEAYEIS 161

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E    + +LL+   L          +      +L                     K   
Sbjct: 162 PE---KKEVLLLYAILRLETAPTDEEAVTLGETALSSYP-----------------KDPY 201

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
               L + ++       A  Y           L     L  +N E  ++  + +++ L
Sbjct: 202 LLRALARAYEA------AQRYADA--------LTLLSTLTSVNPEDPDAFFLRARLRL 245



 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 66/237 (27%), Gaps = 41/237 (17%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----------------NAKEWN 222
           A    PD      ++   Y    ++SRA+    Q  +                    E++
Sbjct: 21  ASSPRPDLAEAYFSLGNAYYEEGDFSRAVGAYTQALRFSPHTPRIEYNLARTYIRTGEYD 80

Query: 223 RNRAIL-------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           R  A+L             L   +     KGD   +      +L+L    +      A+ 
Sbjct: 81  RAEALLEGLLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARL 140

Query: 270 LISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV---GKLKRALRLEEINKESV 325
            + +     A     + ++++P   E+  +Y  L  E        +           +  
Sbjct: 141 RMEEGDVSAALAYAGEAYEISPEKKEVLLLYAILRLETAPTDEEAVTLGETALSSYPKDP 200

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI------EQANSHNT 375
             L  +++          A         + P   + F L A++      E     + 
Sbjct: 201 YLLRALARAYEAAQRYADALTLLSTLTSVNPEDPDAFFLRARLRLLYAGEVKEGLDD 257



 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 9/158 (5%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    +      ++GD   +     ++L+   ++       A++ I   +  +AE +LE 
Sbjct: 29  AEAYFSLGNAYYEEGDFSRAVGAYTQALRFSPHTPRIEYNLARTYIRTGEYDRAEALLEG 88

Query: 286 IWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           + + +P        +A ++      +      +RAL L       V  L  ++++ +E G
Sbjct: 89  LLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELS---PGDVTILYNLARLRMEEG 145

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +  A A A  A +I+P K+  LLL  I +  +  TD+
Sbjct: 146 DVSAALAYAGEAYEISPEKKEVLLLYAILRLETAPTDE 183


>gi|294636812|ref|ZP_06715147.1| TPR domain protein [Edwardsiella tarda ATCC 23685]
 gi|291089955|gb|EFE22516.1| TPR domain protein [Edwardsiella tarda ATCC 23685]
          Length = 389

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 79/270 (29%), Gaps = 39/270 (14%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+   ++ +D +     
Sbjct: 83  GEVDRAIRIHQSLMESASLSFEQRLLAVQQLGRDYMAAGLYDRAEEMFSQLVDEADFRLS 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    EW +AI    +  +  KE  R   A      +L+     D+  + + 
Sbjct: 143 ALQQLLVIHQATSEWHKAIEVAEKLVRLGKEQQRGEIAHFYCELALQAMGSDDLDKAQNL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK--IWKVNPHPEIANIYTHL 302
             ++          SI   +   +  +  KA      +LE+   +     P +   Y   
Sbjct: 203 LKKAAAADKGCARVSIMQGRVYQALGEPAKAVTAFAQVLEQDRAFVSEVLPLMEACY--- 259

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351
                         L +           V     +   L +G + +A      A      
Sbjct: 260 ------------QTLGQAGPWHDFLRRCVEEDAGASAELMLGQVIEAEEGLEAAQIYVSR 307

Query: 352 -MKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            ++  P   +F  L     A      +   
Sbjct: 308 QLQRHPTMRVFHRLMDYHLAE-AEDGRARE 336


>gi|284923560|emb|CBG36655.1| cellulose synthase operon protein C (TPR-repeat-containing protein)
           [Escherichia coli 042]
          Length = 1140

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 99/348 (28%), Gaps = 59/348 (16%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-----NKKRK 278
            +          +    D   +    I SL     S        +   +Q     N+ R+
Sbjct: 513 EQVYAYGLYLSGH----DQDRAALAHINSLPRAQWSSNIQELVNRLQSNQVLETANRLRE 568

Query: 279 AEVILEKIWKVNPHP-----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +    E    +   P     ++    +     + T  +      L      + ++++ ++
Sbjct: 569 SGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAILGLT 627

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           ++ +  G    A ++                   + QA   +T     
Sbjct: 628 EVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398


>gi|115400781|ref|XP_001215979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191645|gb|EAU33345.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 936

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 91/265 (34%), Gaps = 37/265 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G+++ A+R   +A + +P+   +  A V+    A++  +A   L   ++ A 
Sbjct: 611 LAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADAQQTDQARELLATARREAG 670

Query: 220 EWNRNRAILLIARSLENADKG-----------------------------DMIASYHDAI 250
                   +   R L N D+                                  +     
Sbjct: 671 TDRVWIKSVAFERQLGNVDEALDLVNQGLQQFPKADKLWMMKGQIYEAQNKYPQAREAYG 730

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309
              + C  S+   + A++         KA  +L++     P  PE+      +  E    
Sbjct: 731 TGTRACPKSVPLWLLASRLEEKAGAVVKARSVLDRARLAVPKSPELWTESVRV--ERRAN 788

Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + +A  L     +E   S ++ S+    LE  +  +A +      K+     +F+ +A+
Sbjct: 789 NIGQAKVLMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDNDPILFITVAR 847

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
           I        +K + W + A+ +  D
Sbjct: 848 IFWGERR-LEKAMTWFEKAIVSDSD 871


>gi|228907251|ref|ZP_04071111.1| hypothetical protein bthur0013_14200 [Bacillus thuringiensis IBL
           200]
 gi|228852391|gb|EEM97185.1| hypothetical protein bthur0013_14200 [Bacillus thuringiensis IBL
           200]
          Length = 434

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAIIYYESLLAEHNVMGGVVIALR-LAET 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKVVEAEEVL 308

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ + + A++ G 
Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M        +  + 
Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381


>gi|169607899|ref|XP_001797369.1| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15]
 gi|160701516|gb|EAT85665.2| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15]
          Length = 1230

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 8/160 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y  A +  +  L+I       +  L    C+I D         K +   P       A
Sbjct: 471 KNYEEAIKAYKFALKIEPNSLNILRDLALLQCQIRDFEGYIESRRKMMQERPQLRQNWTA 530

Query: 194 VVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +   + LA  ++ A   L       K+   + +   +   + +++  A+ GD   +    
Sbjct: 531 LAIAHHLAGNYAEAENILKTYEETLKQTPPKSDLEHSEATLYKNMIIAESGDTERALAHL 590

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            E ++   +   A    A+ L+   +  +A    EK ++ 
Sbjct: 591 EEVVRNSLDRTSALEMKAQYLLQLGRNEEA----EKAYRT 626


>gi|42521762|ref|NP_967142.1| TPR domain-containing protein [Bdellovibrio bacteriovorus HD100]
 gi|39574292|emb|CAE77796.1| putative TPR domain protein [Bdellovibrio bacteriovorus HD100]
          Length = 240

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 19/228 (8%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALD 182
           L E +       Y +A   L  ML +  TR   VY  L       G  + A +   +AL+
Sbjct: 9   LSEARGYFINGNYKMAEPILNQML-LQNTRNPEVYQMLATIFYDKGQFSKAIKTFRRALE 67

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           I P     +  +        ++       L+ + +  K+  +    +    + ++ +  D
Sbjct: 68  IDPTYTDASVGLSIILNDLGKYDEGKQVFLDAQSQLEKKSGKQDPFVDEKIASKHEELAD 127

Query: 242 -------MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292
                     +    +++ KL       ++  A+  +   +  +A   L+ + +  PH  
Sbjct: 128 LYYQYKRYNEALEQLLKAQKLSSRKAEITMRIAEVHVQLGQGDRAIKDLKSLIREYPHLI 187

Query: 293 PE---IANIYTHLLSENTVGKLKRALRLEEINKESVES--LVIVSKIA 335
           P    +  IY +  S N     ++   +   + +  E+   + +++ A
Sbjct: 188 PARLKLGAIYYN--SNNIAEATEQWENILIRDPQHPEALRYLKMAQAA 233


>gi|289615913|emb|CBI57264.1| putative CDC27 protein [Sordaria macrospora]
          Length = 815

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 92/285 (32%), Gaps = 22/285 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-------FAVYS 159
            +Y+S   +  +   V     +    +  Y  A +  + +  I  TR          ++ 
Sbjct: 508 AAYISLPRSHQDTPWVLAQMGRTQYEQANYAEAEKYFKRLRVIAPTRLEDMEVYSTVLWH 567

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E+            A + +D   D+P    A+   + LA +  +A+    +  +   
Sbjct: 568 LKKETELS-------FLAHEMIDSVWDSPEAWCALGNAWSLAYDHEQALRCFKRATQLDP 620

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    A     +  E+ +  +   +      ++        A     +         KA
Sbjct: 621 KF----AYAYTLQGHEHVENEEYDKALTAYRHAIAADKRHYNAYYGIGRVYEKLGNYDKA 676

Query: 280 EVILEKIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
                    ++P H  +      +    +     L    R  E+   + +  +  ++  L
Sbjct: 677 LSHYHAASVIHPTHAVLICCMGSVLHKQKQIKQALPYFTRAAELAPRAPDVRLKKARALL 736

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
           +MG    A  + M+   +AP R ++  LL ++ +        + +
Sbjct: 737 QMGQTKAAQTELMILKDLAPDRAQVHFLLGKLSKTLHDKKSAVRH 781


>gi|237731704|ref|ZP_04562185.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907243|gb|EEH93161.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 389

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 92/282 (32%), Gaps = 57/282 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL VQ      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       R+G                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L+     DM  +     +      NS   SI   +  + 
Sbjct: 167 LVKLGKDKQRIEIAHFYCELALQQMGSDDMDRAMTLLKKGAAADKNSARVSIMMGRVYMV 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIA--------NIYTHL-LSENTVGKLKRALRLEEINKE 323
           +    KA   L+++  ++   E+         + Y HL  ++     L+RA    E N  
Sbjct: 227 KGDYAKAVESLQRV--ISQDKELVSETLEMLQSCYQHLGKNDEWAEFLRRA---VEENTG 281

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           +  + ++++ I       D A       ++  P   +F  L+
Sbjct: 282 AA-AELMLADILEAREGTDTAQVYITRQLQRHPTMRVFHKLM 322


>gi|319786990|ref|YP_004146465.1| hypothetical protein Psesu_1387 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465502|gb|ADV27234.1| tetratricopeptide repeat protein [Pseudoxanthomonas suwonensis
           11-1]
          Length = 392

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 94/302 (31%), Gaps = 25/302 (8%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T    I   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRSDLSDAQRVQALLALGEDYMKSGLLDRAETVFTDLARIDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W RAI    + ++   +   +  A      +      GD+ ++   
Sbjct: 148 ALRHLIGIYQAERDWERAIENAMRFEEATGEPMGKLVAQFECELAERLRGNGDLASARAA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +     + A I   +          A    E+  + +P       P +   Y  +
Sbjct: 208 IARAYQADATCVRAGILEGRIESDAGNPEGAIRAFERAARHDPDYLPEVLPGLLAAYAQV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID--QAHAKAMLAMKIAPRKEI 360
             + +  +      L E+++       +++   L        QA       +K  P    
Sbjct: 268 -GDTSGAR----AFLAEMSEHYRGIAPVLALTRLIEQQEGAVQARDYLGRQLKDRPSVRG 322

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTL 415
              L  +  A   ++   L+  +     +   +P +       G  +  W    P  K  
Sbjct: 323 EAALIDLTLAVGADSTATLHDLKHITDQLLVRNPSYRCTRCGFGARTHHWQ--CPSCKEW 380

Query: 416 CY 417
             
Sbjct: 381 GT 382


>gi|229845050|ref|ZP_04465186.1| hypothetical protein CGSHi6P18H1_00824 [Haemophilus influenzae
           6P18H1]
 gi|229812022|gb|EEP47715.1| hypothetical protein CGSHi6P18H1_00824 [Haemophilus influenzae
           6P18H1]
          Length = 396

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 94/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + LV     +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLVKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE + + NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVEILENVLEQNPDYTGEILSP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + + K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKNPSTLIFHRFMQYQIDDAEDG 339


>gi|303276312|ref|XP_003057450.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461802|gb|EEH59095.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 685

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 26/250 (10%)

Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYA-------- 177
            Q     ++   A    +  +  +P  +  AVY  +    +     +    A        
Sbjct: 268 AQFEELCKEPERARAIYKYALDNLPKEKAQAVYQNFMTFEKQYGNEAGIDDAVLGKKRVE 327

Query: 178 -TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIA 231
               +   P          +    A E  +A     +   N          R    L I 
Sbjct: 328 YEDEVRKDPTNYDAWFDYTRLEENAGEIEKAREVYERAIANVPPATAKQFWRRYIYLWIN 387

Query: 232 RSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKI 286
            +L E  + GD+  +     E LKL      +     + A++  I Q +   A  IL   
Sbjct: 388 YALFEELEAGDLERAREVYRECLKLIPHKVFSFSKIWVMASEFEIRQKRLDAARKILGLA 447

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSID 342
             + P  +I  +Y  +  E  +G + R   L + +      +  +    +++   +G  +
Sbjct: 448 IGLAPKDKIFKVYIDM--EMQLGNVDRCRTLYQKHLEIAPHNCFTWEKFAELENSLGETE 505

Query: 343 QAHAKAMLAM 352
           +A A   +A+
Sbjct: 506 RARAIFEIAI 515


>gi|225850059|ref|YP_002730293.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
 gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 559

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 15/206 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+   +A     A +++  V +    ++E L  L   ++     QY  A + L  +  + 
Sbjct: 307 GMAYESAQRYKKAEEIYLKVLKLEPENSEILERL--AEVYTRTGQYEKALDVLNRLYSLD 364

Query: 151 ATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                    L   +    + G+L++A  Y  +A  I+   P +       Y    +W +A
Sbjct: 365 PRD---YRVLLIMADIENKRGNLDAALSYIQEAKSINDKDPTIYFFEGIYYEKLDQWDKA 421

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-- 265
                +  +   ++    A+     SL      D+  +     ++L+L  +S  A+    
Sbjct: 422 EEAFKKALELRPDFP--DALNYYGYSL-IIRNRDIDRAMDMIRKALELVPDS--AAYLDS 476

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291
                  + +  KA   +++ ++  P
Sbjct: 477 LGWGYFKKGEYLKALKYIKQAYQKAP 502



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 96/299 (32%), Gaps = 67/299 (22%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYF----ES---------CRIGDLNSAQRYATKALDISP 185
           A +  + +  +    E A+  +      E+          +  D   A+    K   ISP
Sbjct: 102 ATKIYKNLGNLDKAEEVALKGIERFPDNEAILSQLVDVYLKKNDAEKAKEVLFKIAKISP 161

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             P V   + + Y+       AI  L +  +    +    A +L+              +
Sbjct: 162 KKPRVYYTLARIYLFQNNKEEAIKHLKKALEIEPLY--QPAYVLLGEL--YLQDRKFKEA 217

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------------- 291
               ++ L+   N + A     +  +  ++ +KAE I+ +I K++P              
Sbjct: 218 EKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRIVKIDPSNKDALLKKFLLYL 277

Query: 292 ------------------HPE-------IANIYTHLLSENTVGKLKRALRLE----EINK 322
                              P+       +   Y       +  + K+A  +     ++  
Sbjct: 278 RENKGEEIIRELEELAKEEPDNPTVLSILGMAY------ESAQRYKKAEEIYLKVLKLEP 331

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILY 380
           E+ E L  ++++    G  ++A         + PR   + L++A IE    +    + Y
Sbjct: 332 ENSEILERLAEVYTRTGQYEKALDVLNRLYSLDPRDYRVLLIMADIENKRGNLDAALSY 390



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 11/207 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +      + A +     +   PD P       + Y       +A     +  +   + 
Sbjct: 70  LLALHAKKKDEAVKILEDFVKRFPDKPETYSFATKIYKNLGNLDKAEEVALKGIERFPDN 129

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                 +L         K D   +     +  K+           A+  + QN K +A  
Sbjct: 130 E----AILSQLVDVYLKKNDAEKAKEVLFKIAKISPKKPRVYYTLARIYLFQNNKEEAIK 185

Query: 282 ILEKIWKVNP--HPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            L+K  ++ P   P    +  +Y          K+   L++ E +   +E+L  + ++ +
Sbjct: 186 HLKKALEIEPLYQPAYVLLGELYLQDRKFKEAEKV--YLKVLEKDPNDLEALNRLFQVYV 243

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           +     +A       +KI P  +  LL
Sbjct: 244 QADQFKKAEEIINRIVKIDPSNKDALL 270



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 8/157 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA-TREF 155
            N+  A               +  +Y  E        Q++ A E  +  L+  P      
Sbjct: 382 GNLDAALSYIQEAKS--INDKDPTIYFFEGIYYEKLDQWDKAEEAFKKALELRPDFPDAL 439

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK- 214
             Y  Y    R  D++ A     KAL++ PD+    +++   Y    E+ +A+ ++ Q  
Sbjct: 440 NYYG-YSLIIRNRDIDRAMDMIRKALELVPDSAAYLDSLGWGYFKKGEYLKALKYIKQAY 498

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           +K   +      +  +  +L N ++   +  Y  A+E
Sbjct: 499 QKAPDDPVVTEHLAEVEEALGNKEEA--LKLYRKALE 533


>gi|149923188|ref|ZP_01911601.1| hypothetical protein PPSIR1_34173 [Plesiocystis pacifica SIR-1]
 gi|149815962|gb|EDM75478.1| hypothetical protein PPSIR1_34173 [Plesiocystis pacifica SIR-1]
          Length = 962

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 101/326 (30%), Gaps = 33/326 (10%)

Query: 77  HKRNYDKGYKALYT--GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
             R  +K          L++ A  N   A    S   +      E    L   +      
Sbjct: 76  EARKREKPADPKTRDAALVAAAHGNPEGAATFLSEHLKSKPGDTEAAFAL--ARAQRLLG 133

Query: 135 QYNIAHEKLEMML------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           + + A E LE         +  A     +  L       GD+  A++     L + P   
Sbjct: 134 RLDAAQETLEAARAQAKKSKDKAVEAQVLRRLAALREVHGDIAGAEKLIVDGLGLDPTNL 193

Query: 189 WVTE-----AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            +       A++   V  ++    I  L     +       + +     +L    +    
Sbjct: 194 LLQGERVRLALISGKVQERDIRGLIDGLYDAYGDGTAQTAEQILGASYAAL---AERAFK 250

Query: 244 ASYHDAIESLKLCDNSI------MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296
           ++     E+  L   S         ++  A+  + + K  +A   + ++ + +P +PE  
Sbjct: 251 STNRLMQEAENLAPASEGSELGDEIAVRYAELFLEKYKPSEAAQTVAQVLERDPWNPEAL 310

Query: 297 NIYTHLLSEN----TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   +  ++       +   A    ++N  + E+  +++ +AL  G  D+A  +    +
Sbjct: 311 ALMARIALDDFRLGPASRA--AEEALQVNPSNAEAHTVLAWVALIEGRRDEARERVTDHV 368

Query: 353 KIAPRKEI--FLLLAQIEQANSHNTD 376
                  +    ++A +         
Sbjct: 369 LTLNPAHVDGQAVMAALAIYERDEAA 394



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 83/280 (29%), Gaps = 60/280 (21%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A    +     EK       P TR+ A+      +   G+   A  + ++ L   P   
Sbjct: 69  TAEMATEEARKREK----PADPKTRDAALV-----AAAHGNPEGAATFLSEHLKSKPGDT 119

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENADKGDMIASY 246
               A+ +   L      A   L   +  AK+       A +L   +      GD+  + 
Sbjct: 120 EAAFALARAQRLLGRLDAAQETLEAARAQAKKSKDKAVEAQVLRRLAALREVHGDIAGAE 179

Query: 247 HDAIESLKLCDN-------SIMASICAAKSLIS--------------QNKKRKAEVILEK 285
              ++ L L           +  ++ + K                      + AE IL  
Sbjct: 180 KLIVDGLGLDPTNLLLQGERVRLALISGKVQERDIRGLIDGLYDAYGDGTAQTAEQILGA 239

Query: 286 IWKV-------------------NPHP-------EIANIYTH--LLSENTVGKLKRALRL 317
            +                      P         EIA  Y    L         +   ++
Sbjct: 240 SYAALAERAFKSTNRLMQEAENLAPASEGSELGDEIAVRYAELFLEKYKPSEAAQTVAQV 299

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            E +  + E+L ++++IAL+   +  A   A  A+++ P 
Sbjct: 300 LERDPWNPEALALMARIALDDFRLGPASRAAEEALQVNPS 339



 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 77/238 (32%), Gaps = 23/238 (9%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169
               +  +  L+EV  A  E  +  A + LE ++Q       TR      L     ++GD
Sbjct: 740 KAQDDPRVQTLMEVMKAGQEGDFESARKGLEALVQGKGDGAQTRLMLGNVL----EQLGD 795

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A +   KA   S +A     A+        +    +  L +            ++  
Sbjct: 796 DKQAAKQYEKAASFSVEALEPLMALAALARKQADVKGELDVLERVLAIDGM-----SLEP 850

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             R+L  A       +   +  +  +      A   A+        K++A+V+L++    
Sbjct: 851 ALRALVLAVASGDKRAEAFSDRASAIAPLHPTALAGASVVAFDAKDKKRAQVLLDESMVT 910

Query: 290 NPHPEIANIYTHLLSENTVGKLK--RALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
              P+ A +   + +     +L   R   L      ++ES     ++        +A 
Sbjct: 911 ALRPD-AGLDVVVSAAVAADRLDDPRVKDLA---PRALESK----ELPKAARKRLEAR 960


>gi|325185760|emb|CCA20240.1| Mitochondrial Protein Translocase (MPT) Family puta [Albugo laibachii
            Nc14]
          Length = 1050

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 16/194 (8%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATR 153
             +   A K+  Y             YL + Q AL +  Y+ A       +   + IP   
Sbjct: 827  GDFEEAYKL--YDEALILDCRSPDAYLHKGQTALLQGSYSKAVEWLRRTMARSVAIPIIH 884

Query: 154  EFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  +Y  +  R G +  A     +A  + PD+  +     +      ++++A+    
Sbjct: 885  V-----IYATALYRSGSILQANDTFREACVLFPDSAEIHLFYGEILADQGDYAKAMQHFV 939

Query: 213  QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                   E      +  +          +  ++     ++LK+      A +  A+ L +
Sbjct: 940  LAHDILPE----CPLPFLNAGRVYVATNNPSSAIEHFNQALKVDPRCSSAHLDIAQVLFA 995

Query: 273  QNKKRKAEVILEKI 286
            Q +  +A    +  
Sbjct: 996  QGRTSEAFRHFDAA 1009


>gi|301780654|ref|XP_002925730.1| PREDICTED: pre-mRNA-processing factor 6-like [Ailuropoda
           melanoleuca]
          Length = 951

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 589 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 646

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 647 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 706

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++                 +  M  +     + LK C +S    +  ++     
Sbjct: 707 LCEEALKHYEDFPKLWMMKGQIEEQEELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 766

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S V+ 
Sbjct: 767 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 824

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 825 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 882

Query: 391 D 391
           D
Sbjct: 883 D 883



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 298 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 354

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 355 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 406

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 407 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 459

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 460 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 505


>gi|85710265|ref|ZP_01041330.1| TPR repeat protein [Erythrobacter sp. NAP1]
 gi|85688975|gb|EAQ28979.1| TPR repeat protein [Erythrobacter sp. NAP1]
          Length = 694

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 55/196 (28%), Gaps = 4/196 (2%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  + S  +    F +    + L    A    Q  IA E    +  +      A Y+L  
Sbjct: 56  ADALGSAQAMLREFPDTMAAWNLAGACARVLGQTAIAEESFRRLEALSPNFAGAAYNLGL 115

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                GD   A+    +A+ I P        +    +       AI  L Q      E  
Sbjct: 116 VLEDKGDPAGAEAAYKRAIAIDPSLAQARNNLGGVLIAQGRLDEAIAQLEQACALRPEL- 174

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A +    +      G +  +      +L+   + + A            +  +A   
Sbjct: 175 ---AEVHNTHANALKKAGRLEEARKAYKRALEAQPDFVTARFNLGSLEQEHGEITQAVEE 231

Query: 283 LEKIWKVNPHPEIANI 298
              + K  P   +A  
Sbjct: 232 YRAVLKAQPGHSLARA 247


>gi|326560831|gb|EGE11197.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 46P47B1]
          Length = 671

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +      +  RA+           E  +  A  +  R+L    +      S   A     
Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I A        +   +  +A  ++  I   +P  ++  I T ++      K    
Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373
             L+ + + +    V+ + I + +     A      A+ I P    F  L   I +A + 
Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330

Query: 374 NTD 376
             +
Sbjct: 331 LDE 333



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314
            +    ++  A+    +   R+A  I +   +K N            +  E     L  A
Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              ++ N + + +   V+ +AL+ G  +QA A     +   PR ++  +L  I
Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258


>gi|149175512|ref|ZP_01854133.1| TPR repeat [Planctomyces maris DSM 8797]
 gi|148845780|gb|EDL60122.1| TPR repeat [Planctomyces maris DSM 8797]
          Length = 317

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 4/138 (2%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
             +    Y+   Q+       + A    E+ L        AV  L       G    A++
Sbjct: 53  LKDPDKFYVTHGQLQEKMGDMDSARNSYEVALGENPKSVEAVLGLARLDQVAGRKIEAEK 112

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              KAL++SP  P V  ++ Q Y   K+W +AI  L +  K A      R  L IA +  
Sbjct: 113 GFQKALEMSPKDPQVRASIGQFYAAEKKWDQAIALLGEASKAAPADKNIRYQLGIAMAS- 171

Query: 236 NADKGDMIASYHDAIESL 253
               GD  A+    I ++
Sbjct: 172 ---AGDYQAAMPHLIRAV 186


>gi|326939236|gb|AEA15132.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 420

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 294

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++        LK   +         E L+ + + A++ G 
Sbjct: 295 QKALELDPGH--LGATLKYAYI--------LKGQEK--------YEELIAIVERAIDSGE 336

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A+AK  L M +      +  + 
Sbjct: 337 PDTQLLWDLAYAKKQLEMYLDALKHYESAYT 367


>gi|323137815|ref|ZP_08072890.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
 gi|322396818|gb|EFX99344.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
          Length = 290

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 14/242 (5%)

Query: 158 YSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +   +       +A     T+ +  +P +          Y     ++ AI    Q  K
Sbjct: 47  RGIAEIADTDSKAAAANIDSLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAIK 106

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                    A     R+L     G   A+ +D   ++++  N   A +  A  L +Q   
Sbjct: 107 LDPNS----AAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNL 162

Query: 277 RKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +A   L+   ++N  PE A  +      H    +    +       + +  +       
Sbjct: 163 DQALSDLDTAIRLN--PESAQAFHARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQAR 220

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +  + +G  D+A      A+ +  +  +      +    + N  K     Q AL    D
Sbjct: 221 GESLVALGKYDKAVEDFNAALNVDNKSALAWAWLGLAYEKNGNRQKAQESYQRALQ--LD 278

Query: 392 PL 393
           P 
Sbjct: 279 PQ 280



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 4/184 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 ++N A       +++      A  +      +IG   +A+     A+ ++P+  
Sbjct: 87  AYARVGRFNEAIADFTQAIKLDPNSAAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHA 146

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                            +A++ L+   +   E     A    AR L +  +GD   +  D
Sbjct: 147 PAYVGRANLLRAQGNLDQALSDLDTAIRLNPES----AQAFHARGLIHQKRGDNARAVTD 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
              ++     +        +SL++  K  KA         V+    +A  +  L  E   
Sbjct: 203 FDNAIDRDPFAAAPYQARGESLVALGKYDKAVEDFNAALNVDNKSALAWAWLGLAYEKNG 262

Query: 309 GKLK 312
            + K
Sbjct: 263 NRQK 266


>gi|300868250|ref|ZP_07112881.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
 gi|300333774|emb|CBN58065.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
          Length = 728

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 73/226 (32%), Gaps = 16/226 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G L  A  +  +AL+  PD       +        +   AI F ++      ++    
Sbjct: 29  AQGKLTEAIAFCRRALEAKPDWAPAYVTMGNVQQAQGQIEEAIRFYSEALAFNPDYAEAY 88

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A L          +G  + +  +  +++ L  +   A      +L  Q K  +A+   +K
Sbjct: 89  ANL----GSMLYKQGRFVEAIVNYEKAIGLKPDLAAAYWNLGNALKQQGKLEEAKSYQQK 144

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI------NKESVESLVIVSKIALEMG 339
             K+NP       Y     +    + K +  +           +SV++   +  +    G
Sbjct: 145 AIKINPQLGGVEFYLD-RGDELANQGKLSEAVAAWKRAITIKPDSVDAYCQIGIVLRYQG 203

Query: 340 SIDQAHAKAMLAMKIAPR-----KEIFLLLAQIEQANSHNTDKILY 380
            + +A      A++I P      + +  +L       +       Y
Sbjct: 204 KLKEAIPYLQKALEIKPDFAIAHQHLCGILRDATNLEAARQAVSKY 249



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 61/182 (33%), Gaps = 11/182 (6%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           ++E     A  L   +     +G +  +      +L+   +   A +       +Q +  
Sbjct: 9   SQETKPEDAQALTQAAEVYYAQGKLTEAIAFCRRALEAKPDWAPAYVTMGNVQQAQGQIE 68

Query: 278 KAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A     +    N  P+ A  Y +L          V  +    +   +  +   +   + 
Sbjct: 69  EAIRFYSEALAFN--PDYAEAYANLGSMLYKQGRFVEAIVNYEKAIGLKPDLAAAYWNLG 126

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
               + G +++A +    A+KI P+    E +L            ++ +  W + A+   
Sbjct: 127 NALKQQGKLEEAKSYQQKAIKINPQLGGVEFYLDRGDELANQGKLSEAVAAW-KRAITIK 185

Query: 390 PD 391
           PD
Sbjct: 186 PD 187



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 22/181 (12%)

Query: 131 LAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESC--------RIGDLNSAQRYATKAL 181
            A+ Q   A     E +   P          Y E+         + G    A     KA+
Sbjct: 62  QAQGQIEEAIRFYSEALAFNPD---------YAEAYANLGSMLYKQGRFVEAIVNYEKAI 112

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + PD       +        +   A ++  +  K   +         + R  E A++G 
Sbjct: 113 GLKPDLAAAYWNLGNALKQQGKLEEAKSYQQKAIKINPQLGGVE--FYLDRGDELANQGK 170

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +      ++ +  +S+ A       L  Q K ++A   L+K  ++   P+ A  + H
Sbjct: 171 LSEAVAAWKRAITIKPDSVDAYCQIGIVLRYQGKLKEAIPYLQKALEIK--PDFAIAHQH 228

Query: 302 L 302
           L
Sbjct: 229 L 229


>gi|302819239|ref|XP_002991290.1| hypothetical protein SELMODRAFT_185963 [Selaginella moellendorffii]
 gi|300140870|gb|EFJ07588.1| hypothetical protein SELMODRAFT_185963 [Selaginella moellendorffii]
          Length = 819

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQ 213
            +L+  +      + A     +A+++ P                  +  A+      L  
Sbjct: 224 RTLFDHAF----FDEALARFKRAIELRPTDVRPYFRSGNSLCSTARFHDAVESYSLALEA 279

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
              N   W      + +   +    +G ++ +     E+  L      A      +L+  
Sbjct: 280 AHSNGPLWCALLPQIHVNLGIALEGQGMLLGACEHYREAAILSPAHYRALKLLGSALLGV 339

Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            + R AE  L +   + P     H ++ ++  H   ++    +       ++     ++L
Sbjct: 340 GEYRAAEKALREAISIKPDYADAHCDLGSV-LHAAGDSDKA-VAEFHAAIQLQPSHTDAL 397

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370
             +     + GS  QA       + + P             L +A +E A
Sbjct: 398 YNLGGCLRDSGSFSQAAEAYSSVIALDPTHWQAHLNKAVSLLGMADVEHA 447


>gi|152993966|ref|YP_001359687.1| hypothetical protein SUN_2394 [Sulfurovum sp. NBC37-1]
 gi|151425827|dbj|BAF73330.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 731

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 8/119 (6%)

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIA 296
              +     E+L+L    +   I  +  L+ Q K R+A  IL+K   + P     H  + 
Sbjct: 577 PGKAEKAYKEALRLQPQFVPGYINYSNFLLQQGKNREAFDILKKGLALLPKMGVLHHALG 636

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             Y  + ++ +   L+   +  E++ ++     + + +AL      +A      A K  
Sbjct: 637 LWY--VRNKESGKALEELRKALELSPDNARFAYVYA-VALAENDPKKAIEVLEKAYKRH 692


>gi|300114549|ref|YP_003761124.1| TonB-dependent receptor [Nitrosococcus watsonii C-113]
 gi|299540486|gb|ADJ28803.1| TonB-dependent receptor [Nitrosococcus watsonii C-113]
          Length = 1125

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 18/200 (9%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P A  +  A+        +   A+  L Q            A     ++      G +  
Sbjct: 213 PAAREIHAALHDYRA--GDLPAALARLEQ-----VPIEVREASYFTLQAALLLVVGRVDE 265

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTH 301
           +      +L+L  +   A    A   + QN+K KA  + ++  K++P    P+IA  Y +
Sbjct: 266 ARSKIQHALQLDPDQGTAYALQAIIALVQNQKEKALSLAQQAAKLDPRSPIPQIALSYVY 325

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---- 357
               N    L  A +  E+   +  +   V+++ L +G+ ++A   A  A+ + P     
Sbjct: 326 QGMFNIERALAHAQQAIELFPGAPLAWARVAELQLSLGNSEKAAKAAQQAVALDPDLART 385

Query: 358 ---KEIFLLLA-QIEQANSH 373
              +    L A  IE+A   
Sbjct: 386 QTVQGFADLTAIDIEEAKGA 405


>gi|225871857|ref|YP_002753311.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225793226|gb|ACO33316.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 436

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 78/254 (30%), Gaps = 9/254 (3%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            + V             +L  +IA      +IA ++   +L        A+  L      
Sbjct: 167 AALVQALKLTPETASDTMLAARIAENAGSPDIAEQEYRHVLANSPEDSAAIAGLTHILMV 226

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
               + A+     AL   PD P +            + + AI  L +   +    +    
Sbjct: 227 EKKYDQAEPLVKSALTRDPDDPTLNAEYAAILSAEGKLTEAIASLEK--LHQLHPHNPTV 284

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             ++A +      GDM  +     + +     +  A     + LI Q +  +A    ++ 
Sbjct: 285 ANMLADA--YLQSGDMDKAAALYPQVIAAQPGNTDALDSYGQVLIRQKRFPEAVSTFQQA 342

Query: 287 WKVNPHPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            K  P  +I       +    +     ++    +  ++   +  +L +++     +    
Sbjct: 343 LKAQPG-DIDALSGVAFASNETGQYQQEIAALEQRAQLTPNTPATLFLLATAYDHLRQYK 401

Query: 343 QAHAKAMLAMKIAP 356
           QA +     +   P
Sbjct: 402 QAASYYHQFLASNP 415


>gi|197106191|ref|YP_002131568.1| TPR domain protein [Phenylobacterium zucineum HLK1]
 gi|196479611|gb|ACG79139.1| TPR domain protein [Phenylobacterium zucineum HLK1]
          Length = 498

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 20/147 (13%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP 150
           ++    ++  A +      Q            L+  +   AE+Q++ A +   E +   P
Sbjct: 77  LAATLGDLGHADEAARAARQAIGLGIAAPETRLVLARALQAEQQFDEAEQAFAEALRLRP 136

Query: 151 ATREFAVYSLYFES---------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
                     Y ++          R GD ++A +   +A+  +P  P +  A+       
Sbjct: 137 D---------YVDANNELAQLMWMRTGDRDTALKPLERAVASAPGHPGLAYALAMAQEFT 187

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAIL 228
            +   A     Q    + +  R  ++ 
Sbjct: 188 GQKEAARATAEQALARSPQDRRLLSLA 214



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 6/139 (4%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +    D G    +   A +++ L   +    +  A++L ++ +  +AE    +  ++ P
Sbjct: 77  LAATLGDLGHADEAARAARQAIGLGIAAPETRLVLARALQAEQQFDEAEQAFAEALRLRP 136

Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                + E+A +   + + +    LK   R              ++      G  + A A
Sbjct: 137 DYVDANNELAQLMW-MRTGDRDTALKPLERAVASAPGHPGLAYALAMAQEFTGQKEAARA 195

Query: 347 KAMLAMKIAPRKEIFLLLA 365
            A  A+  +P+    L LA
Sbjct: 196 TAEQALARSPQDRRLLSLA 214


>gi|321470550|gb|EFX81526.1| hypothetical protein DAPPUDRAFT_303463 [Daphnia pulex]
          Length = 611

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 9/188 (4%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRY 176
           L  LL         ++  A +    +   P T    R  A+        ++G    +   
Sbjct: 331 LARLLRGTFLSLLGEHEKALDDFSAVFNDPETDPKVRVNALVKRATLRMQLGSPEESLHD 390

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLIARS 233
              A ++ P+   V     Q Y+L  + S A++   +      ++      +       +
Sbjct: 391 LLMAAELGPENADVFHHRGQVYMLLDQASEAMSDFAKAVSLNGDFPIALVQKLYTDYRAA 450

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +  ++ G+++AS     ++++         +  A+ L  Q +  KA+ +  K  +V+PH 
Sbjct: 451 VAMSNAGEVVASLAAFEDAIRRFPTCPECFLLYAQVLSDQQEFVKADELFMKALEVDPHN 510

Query: 294 EIANIYTH 301
             A  Y H
Sbjct: 511 --ATAYVH 516



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 6/142 (4%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP--ATREFA 156
             +   + ++      F      +LL  Q+   ++++  A E   + +   P  AT    
Sbjct: 457 GEVVASLAAFEDAIRRFPTCPECFLLYAQVLSDQQEFVKADELFMKALEVDPHNATAYV- 515

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK- 215
              L  +    G++  A ++  +A+ +     +  E +    V      RAI   ++   
Sbjct: 516 HRGLL-QLQSTGNVELATKHIEEAIRMDDKCEFAYETLGTIEVQRGNLRRAIELFDKAIP 574

Query: 216 KNAKEWNRNRAILLIARSLENA 237
            +  E   +    L   +L   
Sbjct: 575 LSKTEAEVSHLFSLKDAALAQL 596


>gi|320102797|ref|YP_004178388.1| Serine/threonine-protein kinase-like domain-containing protein
           [Isosphaera pallida ATCC 43644]
 gi|319750079|gb|ADV61839.1| Serine/threonine-protein kinase-like domain protein [Isosphaera
           pallida ATCC 43644]
          Length = 979

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/369 (11%), Positives = 100/369 (27%), Gaps = 33/369 (8%)

Query: 14  VICSFIIVSHYPEDVSITWGNRLY------RTSPFVILSI----LYFFLFAWILLFAVSR 63
                + ++  P+ + +   ++        +    V L++    L   L     L A  R
Sbjct: 381 ASLGVVALARMPDAIQLVLASQRIRHSDNRQMGSPVALALRPDSLSVQLNHAGSLLAHQR 440

Query: 64  FFLSCPAMLFHMLHKR--NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
           F  +        + +R     +G+  L   +         +   + +  +      + + 
Sbjct: 441 F--NDVEAFSRAILERHPKESRGWLMLAQAI----EGRGRVTEALDAARAAVECDGDSWG 494

Query: 122 VYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
                 ++ L       A   L    E +   P   +  +  L     R+G+   A    
Sbjct: 495 ARYTLARLQLQAGDPETARRTLDRIEERLEGRPEMMDVQLIRLAELLRRLGEPERAVALC 554

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            + L+   D      ++            A               R    L + R     
Sbjct: 555 RRVLESHSDHALGFTSLGMALAQLGRIDEAEASWRHALALNPNEPRASGQLALLR-FRQG 613

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSL------ISQNKKRKA-EVILEKIWKVN 290
             G+ I  +  A  +     + I     AA             +   A   +L       
Sbjct: 614 RLGEAIELFERAFTNAASSQD-IPLEETAAYLYNLGMAQARAGRFGDAETSLLRLSTFKP 672

Query: 291 PHPEIANIYTH-LLSENTVGKLKRALR-LEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           PHP++ +     L +++ + +     R L +         + ++ + +      +A   A
Sbjct: 673 PHPKVRSALLEVLANDDDLNRAIHVTRGLMKNQPHDPSLRLTLAVLLMRSQQTAEAVDLA 732

Query: 349 MLAMKIAPR 357
                  P 
Sbjct: 733 AQVQADHPD 741



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 95/307 (30%), Gaps = 48/307 (15%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA---ERQYNIAH 140
           G+ +L   L  +   +   A   H+         NE        Q+AL    + +   A 
Sbjct: 567 GFTSLGMALAQLGRIDEAEASWRHALA----LNPNEPRA---SGQLALLRFRQGRLGEAI 619

Query: 141 EKLEMMLQI---------PATREFAVYSL-YFESC--RIGDLNSAQRYATKALDISPDAP 188
           E  E                T  + +Y+L   ++   R GD  ++     +     P  P
Sbjct: 620 ELFERAFTNAASSQDIPLEETAAY-LYNLGMAQARAGRFGDAETSLL---RLSTFKPPHP 675

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            V  A+++      + +RAI       KN       R  L    ++          +   
Sbjct: 676 KVRSALLEVLANDDDLNRAIHVTRGLMKNQPHDPSLRLTL----AVLLMRSQQTAEAVDL 731

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---------NP--HPEIAN 297
           A +      +    ++     L +  +  +A  +LE   K+         +P    ++  
Sbjct: 732 AAQVQADHPDWFEPALVYGDLLGTVGRFAEAAQMLECALKLIGEREGPRQSPRNQRQLMG 791

Query: 298 IYTHLLSENTVGK---LKRALRLEEINKES-VESLVIVSKIALEMGSIDQA---HAKAML 350
              H     T  +   +     L   + +   E  +++ + AL  G I  A     +   
Sbjct: 792 AIEHARQLETACRWVEVWSRGELCGFDPQHNPEFSMLMIQAALARGWIVPALTLAQRLND 851

Query: 351 AMKIAPR 357
           A ++ P 
Sbjct: 852 ADQLTPT 858


>gi|296112414|ref|YP_003626352.1| tetratricopeptide TPR_2 [Moraxella catarrhalis RH4]
 gi|295920108|gb|ADG60459.1| tetratricopeptide TPR_2 [Moraxella catarrhalis RH4]
 gi|326561921|gb|EGE12256.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 7169]
 gi|326570335|gb|EGE20379.1| tetratricopeptide TPR_2 [Moraxella catarrhalis BC1]
          Length = 671

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +      +  RA+           E  +  A  +  R+L    +      S   A     
Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I A        +   +  +A  ++  I   +P  ++  I T ++      K    
Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373
             L+ + + +    V+ + I + +     A      A+ I P    F  L   I +A + 
Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330

Query: 374 NTD 376
             +
Sbjct: 331 LDE 333



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314
            +    ++  A+    +   R+A  I +   +K N            +  E     L  A
Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              ++ N + + +   V+ +AL+ G  +QA A     +   PR ++  +L  I
Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258


>gi|268317305|ref|YP_003291024.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334839|gb|ACY48636.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 409

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 11/181 (6%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           ++L   + R G    A     + L + P+A      + + Y        A   L    + 
Sbjct: 108 HNLANNAARRGQFREAIALFRRELALRPNAL-SWRGIGRAYAELGRPDSARLALETALR- 165

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              ++   A   +  +  N ++G    +   A  + +L   S++A       L+   +  
Sbjct: 166 ---YDSTYAEAWLDLAELNENEGRYDEALRAARRAWELAPKSLVARYRLGNLLLLTGQPA 222

Query: 278 KAEVILEKI-----WKVNPHPEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIV 331
           +A  +LE +     W    H  +  +   L       + L+RA  L  +  +  ++ ++V
Sbjct: 223 QARPLLESVVQEAPWHQAAHYSLGRVLQQLGETEAARRMLERAEALRALQAKVEQAELLV 282

Query: 332 S 332
           +
Sbjct: 283 A 283


>gi|222081532|ref|YP_002540896.1| adenylate cyclase protein [Agrobacterium radiobacter K84]
 gi|221726211|gb|ACM29300.1| adenylate cyclase protein [Agrobacterium radiobacter K84]
          Length = 736

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 5/163 (3%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
               A   A +AL + P+       +    ++    + A    N+            A  
Sbjct: 438 ARKIAYDAAGQALKLDPNNARAHTVLALLQLVDGREAEARESANRAVAAQPNS----AEA 493

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIW 287
               +L  +  G+   +  +   +L+L  +   +  + A   L +     +A  ++E   
Sbjct: 494 AGNLALILSHTGNHDEAIAEIDRALRLDPSPSPSFQLLAGIVLYTARDNGRAVPLIEAAR 553

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              P+ E A  Y          +++ A    ++ +   ES + 
Sbjct: 554 DALPNVEPAREYLTAAYGFDGDRVRSAAEKTKLLELFPESNLA 596



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 8/128 (6%)

Query: 174 QRYATKALDISPDAPWVT--EAVVQQYVLAKE----WSRA--ITFLNQKKKNAKEWNRNR 225
             Y  KA+D+ P+        A V   V   +    WS A            A + + N 
Sbjct: 397 LSYYQKAIDLDPNFADAHAGIARVAVDVWRNDYNFLWSAAVARKIAYDAAGQALKLDPNN 456

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A      +L     G    +   A  ++    NS  A+   A  L       +A   +++
Sbjct: 457 ARAHTVLALLQLVDGREAEARESANRAVAAQPNSAEAAGNLALILSHTGNHDEAIAEIDR 516

Query: 286 IWKVNPHP 293
             +++P P
Sbjct: 517 ALRLDPSP 524


>gi|22298738|ref|NP_681985.1| hypothetical protein tll1195 [Thermosynechococcus elongatus BP-1]
 gi|22294919|dbj|BAC08747.1| tll1195 [Thermosynechococcus elongatus BP-1]
          Length = 281

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 58/176 (32%), Gaps = 16/176 (9%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L+ +    I         +S Q     +Y + L   Q          A +  + +L    
Sbjct: 84  LIQLGKGEIASVIDPLRRLSAQRPEQTDYAILL--GQAQQQTGDREGAAQTFQGVLAKSP 141

Query: 152 TREFAVYSLYFESCRIGDLNSA-------QRYATKALDISPDAPWVTEAVV---QQYVLA 201
               A+ +L     +     +A        + A +A  + P +  VT   +     Y+  
Sbjct: 142 GNLNALRALVDLYLKENRPQAAIGLIQDTLQGAEQANKVQPGSVDVTAVQLLLGDVYMTQ 201

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           K +  A+T      K      R     ++A+++   ++G    +     ++++L  
Sbjct: 202 KRYDEALTLFQNLGKENPNDFRP----VLAQAMALTEQGKKTQAAALYAKAVELAP 253


>gi|325268008|ref|ZP_08134655.1| tetratricopeptide (TPR) domain protein [Kingella denitrificans ATCC
           33394]
 gi|324980549|gb|EGC16214.1| tetratricopeptide (TPR) domain protein [Kingella denitrificans ATCC
           33394]
          Length = 390

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 9/154 (5%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIG--DLNSAQRYATKALDISPDA 187
            + + A    + +L  P T    RE  +Y L       G  D           L  S  A
Sbjct: 89  GENDKAIAMHKALLDSPDTVGAKRERVLYELGLNYQNAGLVDRAEQILLG---LQHSNMA 145

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               E ++  Y   ++W +AI        + + +    A      +     +G+  A+  
Sbjct: 146 QSANEILLNIYQQDRDWEKAIATAQLLAHDEQTYQFEIAQFYCEMAQAELFRGNDDAAQQ 205

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               +L+       A++ A    + Q + + A  
Sbjct: 206 KVQAALQANPKCARANMIAGDIAVKQGRFQDAVA 239


>gi|194224664|ref|XP_001493255.2| PREDICTED: similar to U5 snRNP-associated 102 kDa protein [Equus
           caballus]
          Length = 915

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 97/300 (32%), Gaps = 41/300 (13%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 554 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 611

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 612 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 671

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++                 +     +     + LK C +S    +  ++     
Sbjct: 672 LCEEALKHYEDFPKLWMMKGQIEEQEELTEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 731

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  +A  ILEK    NP +P +      L     +  +  A  L     +   S  ++ 
Sbjct: 732 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPSSGVLW 789

Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    D
Sbjct: 790 SEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIDSD 848



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 263 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 319

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 320 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 371

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 372 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 424

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 425 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 470


>gi|268572137|ref|XP_002641244.1| Hypothetical protein CBG09112 [Caenorhabditis briggsae]
          Length = 1717

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 22/205 (10%)

Query: 160  LYFESCRIGDLNSAQRYATKAL-DISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQK 214
            L+ E     DL +A++ A +AL  I+P        +  A +   V   + +       + 
Sbjct: 1469 LFVEK---SDLKAARKTAEEALSAINPTESEELLKMWTAYLNMEVAYGDSTTVDEVFKRA 1525

Query: 215  KKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             KNA  +   R +  I +   ++A+   ++        + KL           A+ L++Q
Sbjct: 1526 CKNANSYTIYRTLAKIYQKFNKHAEAKHILEQMVSKFRANKLE-----VWTLLAEHLMNQ 1580

Query: 274  NKKRKAEVILEKIWKVNP----HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVE 326
             +++ A  +L +  K  P    H ++ + +  L     +   G+      L   + +  +
Sbjct: 1581 KEQKGARDLLPRALKSAPKAQQHIQLISKFAQLEFKLGDAERGR-TLLEGLVTAHPKKTD 1639

Query: 327  SLVIVSKIALEMGSIDQAHAKAMLA 351
              ++ +  AL+   I+ A      A
Sbjct: 1640 LWLVYADAALKHLGIEHARKILERA 1664


>gi|302812416|ref|XP_002987895.1| hypothetical protein SELMODRAFT_183465 [Selaginella moellendorffii]
 gi|300144284|gb|EFJ10969.1| hypothetical protein SELMODRAFT_183465 [Selaginella moellendorffii]
          Length = 809

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQ 213
            +L+  +      + A     +A+++ P                  +  A+      L  
Sbjct: 214 RTLFDHAF----FDEALARFKRAIELRPTDVRPYFRSGNSLCSTARFHDAVESYSLALEA 269

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
              N   W      + +   +    +G ++ +     E+  L      A      +L+  
Sbjct: 270 AHSNGPLWCALLPQIHVNLGIALEGQGMLLGACEHYREAAILSPAHYRALKLLGSALLGV 329

Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            + R AE  L +   + P     H ++ ++  H   ++    +       ++     ++L
Sbjct: 330 GEYRAAEKALREAISIKPDYADAHCDLGSV-LHAAGDSDKA-VAEFHAAIQLQPSHTDAL 387

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370
             +     + GS   A       + + P             L +A +E A
Sbjct: 388 YNLGGCLRDSGSFSLAAEAYSSVIALDPTHWQAHLNKAVSLLGMADVEHA 437


>gi|281343242|gb|EFB18826.1| hypothetical protein PANDA_015282 [Ailuropoda melanoleuca]
          Length = 922

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 560 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 617

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 618 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 677

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++                 +  M  +     + LK C +S    +  ++     
Sbjct: 678 LCEEALKHYEDFPKLWMMKGQIEEQEELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 737

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S V+ 
Sbjct: 738 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 795

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 796 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 853

Query: 391 D 391
           D
Sbjct: 854 D 854



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 269 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 325

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 326 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 377

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 378 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 430

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 431 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 476


>gi|86608732|ref|YP_477494.1| TPR domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557274|gb|ABD02231.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 653

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 7/172 (4%)

Query: 119 EYLVYLLEVQIAL--AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           E+L  LL  Q        Q+  A    + +LQ   T   A++ L     + G L+ A   
Sbjct: 19  EHLQRLL-AQAVRHHQAGQWPQAVSLCQQVLQAQPTHPEALHLLGVCRQQQGSLDDAIAL 77

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +AL   P  P     +      A + + A T L    +         A +L    L  
Sbjct: 78  IRQALAHQPWFPDAHFNLGIVLKQAGQLAEAKTHLQLALEQGGP----DAEVLYQLGLVL 133

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
             +GD+ A+     ++L+L  +   A+   A  L    ++ +A  +  ++W+
Sbjct: 134 RQQGDLEAALVPLGQALELQPDFADAAYTLAILLRDCGREEEAAELFYQLWQ 185


>gi|326573645|gb|EGE23604.1| tetratricopeptide TPR_2 [Moraxella catarrhalis CO72]
          Length = 671

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +      +  RA+           E  +  A  +  R+L    +      S   A     
Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I A        +   +  +A  ++  I   +P  ++  I T ++      K    
Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373
             L+ + + +    V+ + I + +     A      A+ I P    F  L   I +A + 
Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330

Query: 374 NTD 376
             +
Sbjct: 331 LDE 333



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314
            +    ++  A+    +   R+A  I +   +K N            +  E     L  A
Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              ++ N + + +   V+ +AL+ G  +QA A     +   PR ++  +L  I
Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258


>gi|196001065|ref|XP_002110400.1| hypothetical protein TRIADDRAFT_54351 [Trichoplax adhaerens]
 gi|190586351|gb|EDV26404.1| hypothetical protein TRIADDRAFT_54351 [Trichoplax adhaerens]
          Length = 1584

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 8/181 (4%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT--R 153
           A +I  ARK           H+E  + L              A +  + + +  P    +
Sbjct: 514 AKDIHRARKCFEKAYDLDKNHDEAAMML--ADTCTITGDNEAAVKIYKSVTEWRPILSCK 571

Query: 154 EFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              +   LY       D+  A      A+   P  PW  E +   Y     ++ AI    
Sbjct: 572 WAWLRLGLYQ--MDHMDIIEACISFQNAIRADPVDPWSWECLGDAYKERGSYTAAIKAYA 629

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  + A E +      L   +      G +  +  D  + L+   + +   I  AKSL +
Sbjct: 630 RCVQLAGEEDTKVIYPLFQVASIKHLLGLLDEAIADYKKILEFHADYVPVLIGIAKSLFA 689

Query: 273 Q 273
           +
Sbjct: 690 K 690


>gi|163798112|ref|ZP_02192049.1| TPR repeat [alpha proteobacterium BAL199]
 gi|159176603|gb|EDP61180.1| TPR repeat [alpha proteobacterium BAL199]
          Length = 618

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 81/234 (34%), Gaps = 15/234 (6%)

Query: 95  IAAHNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           +A  +   A K  S     +         L  LL         Q   A E     L I  
Sbjct: 116 LARGDRATALKAQSRAVELAPDSAVQRYNLGNLLAA-----TGQTAKAAEAYGATLDIDP 170

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+ +L     + G+L+ A+    +AL   P  P +        +   +  RA+  +
Sbjct: 171 GHVGALNNLSVLHKQAGNLDEAEALLDEALLHDPMNPELLANHADILLQRGQGERALETM 230

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +    A      +A L +A      + G +  +  +   +++    +   ++  ++ L 
Sbjct: 231 RRAAGLAP----GQATLRLALGSMLLELGRLSEAGQELAAAMRGAPENADIALALSRLLR 286

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINK 322
            QN+   A+   ++  K++  P  A +      L+    V   ++   LE ++ 
Sbjct: 287 RQNQLDGAQAAADRAVKLSGKPSAAEVLAIELLLMRGRYVDAWEKLDALEALSP 340



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 87/306 (28%), Gaps = 49/306 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +++       A ++  +         + +  L      LA+ +   A +     L + 
Sbjct: 44  GTIALGGGETARALELIGHAVAIAPTDGKTVGNL--GVAYLAQNKLAEAEDCFRRALDLE 101

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISP--------------------DAPWV 190
             +     +        GD  +A +  ++A++++P                     A   
Sbjct: 102 PGQPALHANFATALLARGDRATALKAQSRAVELAPDSAVQRYNLGNLLAATGQTAKAAEA 161

Query: 191 TEAVVQ--------------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             A +                +  A     A   L++   +          LL   +   
Sbjct: 162 YGATLDIDPGHVGALNNLSVLHKQAGNLDEAEALLDEALLHDP----MNPELLANHADIL 217

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
             +G    +      +  L        +     L+   +  +A   L    +  P + +I
Sbjct: 218 LQRGQGERALETMRRAAGLAPGQATLRLALGSMLLELGRLSEAGQELAAAMRGAPENADI 277

Query: 296 ANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           A   + LL      +       RA++L      + E  V+  ++ L  G    A  K   
Sbjct: 278 ALALSRLLRRQNQLDGAQAAADRAVKLSG-KPSAAE--VLAIELLLMRGRYVDAWEKLDA 334

Query: 351 AMKIAP 356
              ++P
Sbjct: 335 LEALSP 340


>gi|332293024|ref|YP_004431633.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332171110|gb|AEE20365.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 673

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 101/317 (31%), Gaps = 44/317 (13%)

Query: 94  SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++  + +   AR + + +   +    E  V L   +  L +  +  A +  E ++   +T
Sbjct: 60  ALGLSGDSAEARLLFTTLKADYPTDFE--VGLNYAESLLWDSDFGAAKDFYETLVAKDST 117

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA-------VVQQYVLAKEWS 205
              A+         + + ++A  Y  KAL + P       +          Q   A ++ 
Sbjct: 118 SFSALLGYANTLSNLKEYDAAITYVNKALTVQPGNANAAVSKKFMRLGKANQLTTAFQYD 177

Query: 206 RAITFLNQKKKNAKEWNRNRAILL--------------------------IARSLENADK 239
            AI  L    ++     +  + L                           + +SL    +
Sbjct: 178 AAIQLLKSALEDMPNDEQIISALANTYIAKKDYENANTMYSQLSDTLTSQVGKSLVAHLQ 237

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ----NK---KRKAEVILEKIWKVNPH 292
            D   +   A ES+          I A +  I       K    R A   L+  +  N  
Sbjct: 238 KDDKLALSLAQESIAFAKADTTKIITANERYIQALIWNGKYATARTAIADLKVTFPTNQR 297

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                    + +      ++    + E +  S +  + ++      G++D+A+A A   +
Sbjct: 298 VAALKATLGMYTGTFKKSIEVYNGILEKDSASFDGNLGIANAYRAQGNLDEAYAFAKNTL 357

Query: 353 KIAPRKEIFL-LLAQIE 368
              P ++    L+  IE
Sbjct: 358 TFYPNQKDATGLMKTIE 374


>gi|330873196|gb|EGH07345.1| hypothetical protein PSYMP_02761 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 654

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 29/214 (13%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD  +A   A  A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC------AAKSLISQNKKR 277
           N A LL  R       GD   +  D  ++L         ++C       A    +  + +
Sbjct: 246 NDATLLAQRGQLRQRLGDRDGARQDFAQAL---------AVCNLPLREQASLYAAMGQPK 296

Query: 278 KAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVES 327
           +A   L+K        P  E+   Y    + +  G L   KR  R   +      ++  S
Sbjct: 297 EALQRLQKARDAGELQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYS 356

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            +  S  A  +    +            P +++F
Sbjct: 357 AMRTSDDAQAIAYFKRVLDYQQTGDLQMPDQQVF 390


>gi|309787507|ref|ZP_07682119.1| cellulose synthase operon C domain protein [Shigella dysenteriae
           1617]
 gi|308925085|gb|EFP70580.1| cellulose synthase operon C domain protein [Shigella dysenteriae
           1617]
          Length = 640

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +   H +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 67  RESGKEAEAEAMLHQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 126

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 127 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 186

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 187 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 221


>gi|170680722|ref|YP_001745805.1| cellulose synthase subunit BcsC [Escherichia coli SMS-3-5]
 gi|170518440|gb|ACB16618.1| cellulose synthase operon protein C, truncated [Escherichia coli
           SMS-3-5]
          Length = 1157

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|326563052|gb|EGE13326.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 103P14B1]
 gi|326577281|gb|EGE27169.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 101P30B1]
          Length = 671

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +      +  RA+           E  +  A  +  R+L    +      S   A     
Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I A        +   +  +A  ++  I   +P  ++  I T ++      K    
Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373
             L+ + + +    V+ + I + +     A      A+ I P    F  L   I +A + 
Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330

Query: 374 NTD 376
             +
Sbjct: 331 LDE 333



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314
            +    ++  A+    +   R+A  I +   +K N            +  E     L  A
Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              ++ N + + +   V+ +AL+ G  +QA A     +   PR ++  +L  I
Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258


>gi|256810580|ref|YP_003127949.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
 gi|256793780|gb|ACV24449.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
          Length = 290

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 70/243 (28%), Gaps = 44/243 (18%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNS 172
            N  +    +  I      +  + E     L+     P  +     +L            
Sbjct: 50  PNHPMANFFKGFIQALHGDFEKSLEFFNRGLKSSDGNPIVKFA--RALAKLHLNK--PEE 105

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
             +   + +  +P   +    +        ++  A+    +  + A              
Sbjct: 106 CLKDLEEVVKANPKFAFAYSFIGGILEDFGKYEDALKAYKKMAEIAPNP-----YAYYKI 160

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +    + G    S     E+LK+    + A I  A+ L+S NK  +A + L+K       
Sbjct: 161 ASLLYNLGKHEESLRYLDEALKIDSKFVSALILKAEILLSLNKISEALLTLKKA------ 214

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                                     +I  ++ ++L ++  I L +G  D+A       +
Sbjct: 215 -------------------------LDIRPDNTQALFVLGLIHLRIGEFDEAINAFNKVL 249

Query: 353 KIA 355
           +  
Sbjct: 250 EKN 252



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 16/193 (8%)

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           K L+  P+ P           L  ++ +++ F N+  K++        I+  AR+L    
Sbjct: 44  KVLEAHPNHPMANFFKGFIQALHGDFEKSLEFFNRGLKSSD----GNPIVKFARALAKLH 99

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----E 294
                    D  E +K       A       L    K   A    +K+ ++ P+P    +
Sbjct: 100 LNKPEECLKDLEEVVKANPKFAFAYSFIGGILEDFGKYEDALKAYKKMAEIAPNPYAYYK 159

Query: 295 IAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAM 352
           IA+ +Y     E ++  L  AL+++        S +I+ ++I L +  I +A      A+
Sbjct: 160 IASLLYNLGKHEESLRYLDEALKIDSK----FVSALILKAEILLSLNKISEALLTLKKAL 215

Query: 353 KIAP--RKEIFLL 363
            I P   + +F+L
Sbjct: 216 DIRPDNTQALFVL 228


>gi|163760770|ref|ZP_02167850.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
 gi|162282092|gb|EDQ32383.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
          Length = 623

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 12/156 (7%)

Query: 239 KGDMIASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKV-NPHP 293
           K +++ +      +++L      A    ++C ++ +        A  IL+   K     P
Sbjct: 357 KANLLMARQSFTRAVELDPTYARAYASMAVCESRLMSQFGVTISAGDILKTADKALAIDP 416

Query: 294 EIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           ++A       +   + +N V       R  +++  S E+   +++  +   + + A    
Sbjct: 417 DLAEAHAARGFALAVGDNRVEASPAFKRAIDLDPNSNEAHRFLAEFCVTDSNFEAAATHF 476

Query: 349 MLAMKIAPRK--EIFLLLAQIEQANSHNTDKILYWT 382
           + A++  P       +L+  +         K   W 
Sbjct: 477 IRALETKPDDCNSALMLVNVLRSLEREEEAKEYGWL 512


>gi|16125584|ref|NP_420148.1| TPR domain-containing protein [Caulobacter crescentus CB15]
 gi|221234333|ref|YP_002516769.1| tetratricopeptide repeat family protein [Caulobacter crescentus
           NA1000]
 gi|13422682|gb|AAK23316.1| TPR domain protein [Caulobacter crescentus CB15]
 gi|220963505|gb|ACL94861.1| tetratricopeptide repeat family protein [Caulobacter crescentus
           NA1000]
          Length = 576

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 10/229 (4%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            +  A E    +         A   + +    +GD   A   A  AL  +P+      A+
Sbjct: 323 DHQAAIEAYGRVPAGAPLYASAQSKIAWAWSALGDKTKALDVARAALTAAPNDRDAAVAL 382

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                 +  W  ++  L+       E    R  LL  R++     G    +  D   +LK
Sbjct: 383 ADLLRASSRWDESVAVLDLLLAREAEAPDWR--LLYMRAIALEQGGRWPEAEKDLQTALK 440

Query: 255 LCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTV 308
           +  +          S I +N +  +A  ++EK     P        +   Y  L    T 
Sbjct: 441 VNPDEPDLLNFLGYSWIDRNERLPEALAMVEKAVAARPQSGAMMDSLGWAYFRLGDYKTA 500

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +++     E+     +    +     + G   +A  +    + + P 
Sbjct: 501 --IEKLEAAVELEPGDPDINGHLGDAYWKAGRTIEARFQWQRVLSLEPT 547


>gi|127512885|ref|YP_001094082.1| hypothetical protein Shew_1957 [Shewanella loihica PV-4]
 gi|126638180|gb|ABO23823.1| conserved hypothetical protein [Shewanella loihica PV-4]
          Length = 386

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 100/310 (32%), Gaps = 40/310 (12%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + +    + ++  P      R+ A+  L  +    G  + A+      +     +  
Sbjct: 83  GEVDRSIRIHQNLIARPTLTTEQRDIAMMELGKDYLAAGFYDRAEEIFLNLVRQEDHSEE 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             + ++  Y + K+W +AI  +   K+K  +     +A L    +    +  D       
Sbjct: 143 AEDQLIAIYQVTKDWQKAIDIIKSLKRKRQQSLKHLQAHLYCELA---DEASDSELKLKH 199

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-- 306
             +++K       A + +AK  ++Q +  +A+ +L +         + +    L  E   
Sbjct: 200 LAQAIKQDPQCGRAMLTSAKLFLAQQEFGRAKEMLCR---------LKDADIELFPEALA 250

Query: 307 -TVGKLKRALRLEEINKESVES---------LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 +    L    +   E+          + +++  +  G    A    +  +   P
Sbjct: 251 IAKEVYQSTEDLGAYRELLREALEQGAGASVAITLAQQMIIQGETQDAEKLILDGLYRHP 310

Query: 357 RKEIFL-LL-AQIEQANSHNTDKILYWTQSALHAM---PDPLWIS-DDGYLSSV--WLPL 408
             + F  L+  QI+ A      + L      +        P +   + G+ S    W   
Sbjct: 311 TMKSFQHLMKMQIQHAEDGQAKQSLNMLAELVEQQIKFR-PSYRCIECGFPSHTLYWH-- 367

Query: 409 SPISKTLCYF 418
            P  K+    
Sbjct: 368 CPSCKSWGTI 377


>gi|99078715|ref|YP_611973.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
 gi|99035853|gb|ABF62711.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
          Length = 572

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 85/266 (31%), Gaps = 35/266 (13%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA-QRYATKALD 182
           LL+    + +   + A ++ + + Q    R FA+Y        +GD   A Q +A     
Sbjct: 132 LLDAWAYMGKGAVSQALDQFDAVAQQDGLRFFALYHKALALASVGDYEGADQLFAANEGQ 191

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFL---------------------NQKKKNAKEW 221
           +   +     A +Q         +A+  L                      +  + +   
Sbjct: 192 LGRSSRRAAIARIQVLSQLGRNDQALEVLVDSFGEGFDPALTEFADQLAMGETLRFSITP 251

Query: 222 NRNRAILLIARSLENADKGDMIASYHD--AIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                +  +  SL  A  G+  + Y    A  + KL    + A + +A  L    +    
Sbjct: 252 TARDGMAEVFYSLGQALSGEAASDYVLMYARMAAKLSPGHVDAVLLSAGLLDQMGRY--- 308

Query: 280 EVILEKIWKVNP--HPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             +    +K  P  HP+     +        S N     +   +L     + V   + + 
Sbjct: 309 -ELSIATYKQVPRDHPDFHAAELGRAEALRRSANPQAAAEVLEQLARDFPQHVAVYIDLG 367

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358
            +  +  +  +A      A++++P +
Sbjct: 368 DLMRQQENYAEAAKAYTRALELSPDE 393


>gi|113476447|ref|YP_722508.1| hypothetical protein Tery_2862 [Trichodesmium erythraeum IMS101]
 gi|110167495|gb|ABG52035.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 448

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 13/264 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +I + + + + A +  + + ++       ++ L       G LN A     +A++I+P 
Sbjct: 189 AEILVNQGELDAAIDCYQSLSKLLPENWLILHKLGKIFRETGKLNDAVEVFKRAIEINPK 248

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            PW  + +        + ++A+    +K     + N   A   I   L    +G +  + 
Sbjct: 249 FPWSYKNLADILYEQGKLNQAL-TCYRKLI-KNDPNIWDAYCKIGEIL--VKQGKINQAV 304

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301
               + +KL  +         ++L  Q K   A  +  K  ++       H  +AN    
Sbjct: 305 VVYRKGIKLNPHLAKFHYLLGEALGKQKKWGSAIKVYSKAIELKANNHLFHRSLANALQE 364

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEI 360
           L   +    +    +  EIN  S      + K+ ++  +   A      A++I P   + 
Sbjct: 365 LGKLDEA--IISYRKAIEINSNSCWLYASLGKVYIQQKNWSDAIECFREAIQIKPDYDKA 422

Query: 361 FLLLAQIEQANSHNTDKILYWTQS 384
           +  +A I +    +++    W   
Sbjct: 423 YEKIAYIFE-QLGDSEAAEKWRNK 445



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 48/110 (43%), Gaps = 2/110 (1%)

Query: 118 NEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           N +L     L  +    ++++  A +     +++ A       SL      +G L+ A  
Sbjct: 314 NPHLAKFHYLLGEALGKQKKWGSAIKVYSKAIELKANNHLFHRSLANALQELGKLDEAII 373

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
              KA++I+ ++ W+  ++ + Y+  K WS AI    +  +   ++++  
Sbjct: 374 SYRKAIEINSNSCWLYASLGKVYIQQKNWSDAIECFREAIQIKPDYDKAY 423


>gi|296159990|ref|ZP_06842810.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1]
 gi|295889736|gb|EFG69534.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1]
          Length = 615

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 60/220 (27%), Gaps = 11/220 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A  ++  A +  E  L++      +  +L      +G    A     + L++ P   
Sbjct: 112 AYAAAGRHEDAADAFEKSLRLQPNDASSHNNLGNALHALGRHTEAIAAFRRTLELRPGHA 171

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +          + AI            +           +      G    +   
Sbjct: 172 GALNNMGMSLNALGRAAEAIPCFQTALAAEPRF----VAAHFNLANTFDATGRHADAVAS 227

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303
              +L L  N   A      +L +  +  +A   LE+   ++P   +A       +  L 
Sbjct: 228 FRAALSLQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALG 287

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +     +     +   +  +   + +  +   L +    +
Sbjct: 288 AHGPAVRA--FDQALRLRPDLASAHMNRALAWLALRDFAR 325


>gi|253565220|ref|ZP_04842676.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5]
 gi|251946685|gb|EES87062.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5]
          Length = 283

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 8/167 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           + L    I L +   + A+    ++M +    T    + + Y    R  D   A+    +
Sbjct: 105 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 162

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L+I P        +        ++  A+  LNQ      E     A+L +AR+    D 
Sbjct: 163 LLEIDPKNYNGRLGLGTLEQKENKFREALDILNQLLVEFPE----DAVLYVARADVERDM 218

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +  D  E+++L  +SI A +      + Q KK  A+   EK 
Sbjct: 219 KHDDLALVDLDEAIRLAPDSIDAYLLRGDIYLDQKKKSLAKADFEKA 265



 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 66/194 (34%), Gaps = 16/194 (8%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  K  +  N + A+L     L     G    +      +L +   ++   +  
Sbjct: 51  AEDLLKQALK-LEPKNAHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILLNR 109

Query: 267 AKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLE 318
           A   + Q  + KA         + +K  +      +   Y + L  +    +L    RL 
Sbjct: 110 AAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQRLL 164

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377
           EI+ ++    + +  +  +     +A       +   P    +++  A +E+   H+   
Sbjct: 165 EIDPKNYNGRLGLGTLEQKENKFREALDILNQLLVEFPEDAVLYVARADVERDMKHDDLA 224

Query: 378 ILYWTQSALHAMPD 391
           ++     A+   PD
Sbjct: 225 LVD-LDEAIRLAPD 237


>gi|238014474|gb|ACR38272.1| unknown [Zea mays]
          Length = 489

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 54/155 (34%), Gaps = 7/155 (4%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-----KVN 290
              +G ++ +     E+  LC +   A      +L    + R AE  LE+         +
Sbjct: 1   MEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLKEDYAD 60

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            H ++ +   H + E+    ++      ++    V++L  +  + ++ G   +A      
Sbjct: 61  AHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTR 118

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            + I P      L   +       +++     + A
Sbjct: 119 VLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 153



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 57/197 (28%), Gaps = 35/197 (17%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G +  A  +  +A  + P      + +        E+  A   L +     +++   
Sbjct: 2   EAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLKEDY--A 59

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A   +  +L     G+   +  +   ++ L    + A        +   +  +A     
Sbjct: 60  DAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRA----- 112

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                      A +YT +L                I      + +  +   L  G  ++A
Sbjct: 113 -----------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQGESEEA 146

Query: 345 HAKAMLAMKIAPRKEIF 361
                 A K+  R E++
Sbjct: 147 KKALKEAFKMTQRVEVY 163


>gi|32475228|ref|NP_868222.1| hypothetical protein RB8167 [Rhodopirellula baltica SH 1]
 gi|32445769|emb|CAD78500.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 922

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 7/218 (3%)

Query: 165 CRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
              GD   A +   +AL   P      ++   V++   L  E   A   L  + + A   
Sbjct: 125 LTQGDYADALQTYREALQRYPTSIALRYMGLDVLRFNGLHDEVGTAEADLFAQMQRAFAG 184

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQNKKRKAE 280
              R  L+ A         D         + ++    + + A +  A+  I +   + A 
Sbjct: 185 YITRDNLIAAGRFLTGRGEDARKVLEMFYDRVRDRDPDYLDAYLATAELAIRKGDFQVAA 244

Query: 281 VILEKIWKVNP-HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             L++  K+    P++ ++      S +     ++      IN + + SL  +++ A++ 
Sbjct: 245 NTLQQALKLEEETPDLHHLLAKAMESSDGQAAAEQIAIALRINPQHLPSLQWLAERAIDR 304

Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375
              D+A   A   ++I P +   + L+A I        
Sbjct: 305 ERYDEAKDVANQMLQINPHEPSAWALMAVISHLRGEYD 342



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 106/342 (30%), Gaps = 86/342 (25%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---------- 152
           A    +    +    +E    LL  Q  L +  Y  A +     LQ   T          
Sbjct: 98  AAATTAASEVERGVWSERWPRLLI-QCQLTQGDYADALQTYREALQRYPTSIALRYMGLD 156

Query: 153 --REFAVYS--------LYFESCR-------IGDLNSAQRY-------ATKALDIS---- 184
             R   ++         L+ +  R         +L +A R+       A K L++     
Sbjct: 157 VLRFNGLHDEVGTAEADLFAQMQRAFAGYITRDNLIAAGRFLTGRGEDARKVLEMFYDRV 216

Query: 185 ----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               PD      A  +  +   ++  A   L Q  K   E        L+A+++E++D  
Sbjct: 217 RDRDPDYLDAYLATAELAIRKGDFQVAANTLQQALK--LEEETPDLHHLLAKAMESSDGQ 274

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299
                   A+   ++    + +    A+  I + +  +A+ +  ++ ++NPH P    + 
Sbjct: 275 AAAEQIAIAL---RINPQHLPSLQWLAERAIDRERYDEAKDVANQMLQINPHEPSAWALM 331

Query: 300 T---HLLSENTVGKLKRALRLEEI---------------------------------NKE 323
               HL  E  V KL RA  L                                    +  
Sbjct: 332 AVISHLRGEYDVEKLMRAAALSTWEQNPNVDHLIGRKLSEKYRFAEGAAYQNLALDADPL 391

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL 364
            + +   +++  L +G  +     A    K  P   + + L+
Sbjct: 392 HLAASFQLAQDMLRLGEEEIGWEIAGEVAKSDPYNVVAYNLM 433


>gi|157812766|gb|ABV81128.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Nebalia hessleri]
          Length = 289

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A +   + +   P     A
Sbjct: 34  GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGHTEEATKLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGHTEEATKLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 54/178 (30%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G ++ A+     AL + P        +            A     +  +   
Sbjct: 26  LANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGHTEEATKLYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E+    A      +     +G +  +     E++++      A      +L      + A
Sbjct: 86  EF----AAAHSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197



 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 52/176 (29%), Gaps = 6/176 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q + A E     L++  T   ++ +L       G    A +   KAL++ P+
Sbjct: 27  ANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGHTEEATKLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                ++++      A    A          +A        K+   P+  + Y +L
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNL 196


>gi|296840828|ref|ZP_06863542.2| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC
           43768]
 gi|296839835|gb|EFH23773.1| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC
           43768]
          Length = 402

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 111/349 (31%), Gaps = 53/349 (15%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   + QQ   ++  L      ++     + + A      +L  P T       
Sbjct: 70  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRTLLDSPDT--VGEKR 124

Query: 157 VYSLYFESC---RIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +AI   
Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LSLQDGEMAREARQHLLNIYQQDRDWEKAIETA 181

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAK 268
                + + +    A      +  +  K +   +      A+E+ K C     A++    
Sbjct: 182 QLLSHDEQTYQFEIAQFYCELAQASLFKSNFDIARFNVGKALEANKRC---TRANMILGD 238

Query: 269 SLISQNK---KRKAEVILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRALRL 317
               Q       +A   +E+    +      ++ + Y      E  + +L    +    L
Sbjct: 239 IEYRQGNFPASVEAYAAIEQQNHAYLSMVGEKLYDAYAEQGKPEEGLNRLIGYMQTFPEL 298

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL-AQIEQANS--- 372
           + IN    +SL++  +         +A   A+  ++  P    ++ LL  +I   +    
Sbjct: 299 DLINVVYEKSLLLRGE--------KEAAQTAIELVRRKPDLNGVYRLLGLRISDMDPTWK 350

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            + D +       L      ++   + +  S    W    P       F
Sbjct: 351 ADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395


>gi|134288421|ref|YP_001110584.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4]
 gi|134133071|gb|ABO59781.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4]
          Length = 273

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 6/124 (4%)

Query: 160 LYFESCRIG--DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           L++E+  +   D ++A+    +AL ++PD    T  +    V ++ ++ AI       K 
Sbjct: 144 LFYEARDLEEVDSDAAEAMYREALLLAPDYINATLNLGCILVDSERFNDAIDVYRAALKY 203

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +     A L     +   D G +  +     E ++   N   A   AA+      +  
Sbjct: 204 QPD----DATLQFNIGVALEDSGQLREALDAYQECIRRSPNFADAHFNAARIHEELGEAT 259

Query: 278 KAEV 281
           KA  
Sbjct: 260 KAIR 263


>gi|7670028|dbj|BAA94982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 744

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 84/278 (30%), Gaps = 24/278 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMML---QIPA 151
            NI  AR + +   +     NEY+     LLE +      +Y  A    +          
Sbjct: 285 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKA----GRYEQARYLFKQATICNSRSC 339

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A   L  +  R     +A++   KA+  SP   +                R    L
Sbjct: 340 ASWLAWAQLEIQQER---YPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL 396

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
               K     N    +LL +  L          +      + +L        I       
Sbjct: 397 ----KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEW 452

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESV 325
            +     A  + ++   ++ + E A+         E   G L  A RL      IN +S 
Sbjct: 453 KEGNTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSY 512

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            + +  +++  + G  ++A     L  + +    ++ +
Sbjct: 513 VTWMTWAQLEEDQGDTERAEEIRNLYFQQSLYINLYFI 550



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 26/233 (11%), Positives = 66/233 (28%), Gaps = 37/233 (15%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+G++  A+     A                  +     S+A   L +  K         
Sbjct: 249 RLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIY 308

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L +  +      G    + +   ++          +IC ++S                
Sbjct: 309 QTLALLEAK----AGRYEQARYLFKQA----------TICNSRSC--------------A 340

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            W       +A     +  E      K   +  + + ++  +  +       +G++++  
Sbjct: 341 SW-------LAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGR 393

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA--LHAMPDPLWIS 396
               +   + PR  + L    + +    + +      + A  L     P+WI+
Sbjct: 394 KLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIA 446


>gi|91202455|emb|CAJ72094.1| similar to Tpr region of human peroxisomal targeting signal-1
           receptor Pex5 [Candidatus Kuenenia stuttgartiensis]
          Length = 312

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 13/219 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   +   ++ +    E LV L   ++   + + + A    E  L I      A 
Sbjct: 88  GMLDEAVDAYKKATELNPSSEEALVGL--GKVLNKKAKSDEAITAFEKALAININNAEAY 145

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKK 216
             L       G  + A R   +A+ I+PD       +   Y    ++  AI   L   K 
Sbjct: 146 EGLGLVHVHKGGPDEAIRLFNRAVAINPDLVESRYNLGILYAKNGQFEEAIAEWLKAIKI 205

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           N K    +  + +    L   +  D IA + +A+E+ +   + +          I +   
Sbjct: 206 NPKRTEFHYNLGIAYTKLGKLE--DAIAVWQNALENTEEISSFL---YLIGLVYIEKGDA 260

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310
           + AE  L K  +V+P     H  +  +Y      +   +
Sbjct: 261 KSAESFLNKALEVDPEFYDVHKVLEELYRSQGMHSEADR 299



 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 79/227 (34%), Gaps = 19/227 (8%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A   +E     PA      Y+L   S + G L+ A     KA +++P +      + +
Sbjct: 61  EAAKAAVEANPNDPAV----YYNLAVLSDKKGMLDEAVDAYKKATELNPSSEEALVGLGK 116

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   AIT   +        N N A       L +  KG    +      ++ + 
Sbjct: 117 VLNKKAKSDEAITAFEKALA----ININNAEAYEGLGLVHVHKGGPDEAIRLFNRAVAIN 172

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGK 310
            + + +            +  +A     K  K+NP     H  +   YT L   E+ +  
Sbjct: 173 PDLVESRYNLGILYAKNGQFEEAIAEWLKAIKINPKRTEFHYNLGIAYTKLGKLEDAIAV 232

Query: 311 LKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + AL     N E + S + ++  + +E G    A +    A+++ P
Sbjct: 233 WQNALE----NTEEISSFLYLIGLVYIEKGDAKSAESFLNKALEVDP 275


>gi|189426649|ref|YP_001953826.1| hypothetical protein Glov_3605 [Geobacter lovleyi SZ]
 gi|189422908|gb|ACD97306.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 248

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 35/196 (17%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  DL   +    +AL + P        +   Y+    W  AI    +  K+   + R+
Sbjct: 76  KRRLDLAEQRYL--RALALRPKYSEARNDLGVLYLETGRWDNAIQQF-RAVKDDLFYPRH 132

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               LI   L    KGD  A+  +   +      + +  +   + L +Q K ++A     
Sbjct: 133 D-HALINLGLAYLGKGDYSAALEELYTARSADPRNPIVKVAIGRVLFAQGKTQQA----- 186

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                      A+ Y   +               EI  +  ++   +    ++   +  A
Sbjct: 187 -----------ADEYRRAI---------------EIAPDYAQAHFQLGLALMKQSQLAAA 220

Query: 345 HAKAMLAMKIAPRKEI 360
            A     ++IAP  EI
Sbjct: 221 RAAFKEVVRIAPDSEI 236


>gi|108759093|ref|YP_633470.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108462973|gb|ABF88158.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 841

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 72/228 (31%), Gaps = 16/228 (7%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE- 141
           KG + L  G    AA  I  A +M +  +Q +      L   L  +      + + A   
Sbjct: 625 KGRRLLAEGNFDAAAEEIRKAIRMDASRAQFYV----ELAKSLMGK---QGGEKDAAEAL 677

Query: 142 --KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQY 198
              L+ M   P  +   +        R G L+ A     +A+       P    A+   Y
Sbjct: 678 QTALKTMGDSP--KLVVMLG--NAYRRQGKLDEALAQYQRAVKDPKAKNPEARLAMGAIY 733

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
               +W  A   L +  +     +   AI L         KGD   +      +L   + 
Sbjct: 734 RERSKWDLAQEQLEKASQEFLGQSDRAAIALTELGRVFQSKGDTAKADETYQRALNADEA 793

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLLSE 305
              A    A  L   +K+     +L + + K  P  E A+    L   
Sbjct: 794 YSPAYYFYATLLSKDSKQGAKAKMLAQEYLKREPSGEHASAARSLAGG 841



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 115/344 (33%), Gaps = 50/344 (14%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL+ + A ++   R   S    Q    ++   Y     +     Q   A    +  L
Sbjct: 454 LTLGLIQMNAGDLERGR--DSLDRAQLLSPDDPRTYASLGAVYRRLGQDAAAWRNYDSAL 511

Query: 148 ---QIPATREFAVYSLYFE--------------SCRIGDL------NSAQRYATK----- 179
              +           L  E                   D        +A   A       
Sbjct: 512 RYGKDHPESLLGRSLLMLEQDSPNFELAHTMLKKLLESDPPPSPRQLAAAHMARSLLISR 571

Query: 180 ----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
                +D+ PD     + + +   + ++  +A T + + ++     ++    L + +   
Sbjct: 572 VSTAMVDLKPDM---QQKLAEATAVPQDKDKARTEMLKSEETGFSLDKQNPELHLIKGRR 628

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI-SQNKKRKAEVILEKIWKV-NPHP 293
              +G+  A+  +  +++++  +     +  AKSL+  Q  ++ A   L+   K     P
Sbjct: 629 LLAEGNFDAAAEEIRKAIRMDASRAQFYVELAKSLMGKQGGEKDAAEALQTALKTMGDSP 688

Query: 294 EI----ANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           ++     N Y      +  + + +RA++  +   ++ E+ + +  I  E    D A  + 
Sbjct: 689 KLVVMLGNAYRRQGKLDEALAQYQRAVK--DPKAKNPEARLAMGAIYRERSKWDLAQEQL 746

Query: 349 MLAMKI--APRKEIFLLLAQIEQA--NSHNTDKILYWTQSALHA 388
             A +          + L ++ +   +  +T K     Q AL+A
Sbjct: 747 EKASQEFLGQSDRAAIALTELGRVFQSKGDTAKADETYQRALNA 790


>gi|118395433|ref|XP_001030066.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284354|gb|EAR82403.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2397

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 99/260 (38%), Gaps = 22/260 (8%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDIS 184
                +   A +  +  ++I            +  LY+E  +    + A  Y  KA++I+
Sbjct: 218 YQNTSKKEEAIKHYKKAIEIDPKYFNAQFNLGL--LYYEEQKD---DEALTYFQKAIEIN 272

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P +P     +   Y      + A+ +  +      ++++      +A   +N  +     
Sbjct: 273 PKSPDSYNNIGLVYYHKNMITEALEYYKKALDVDPQYHKAYHNSALAYEKQNLIQN---- 328

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299
           +     +S+++    + +        I QN   +     +KI +++P     H ++A +Y
Sbjct: 329 AIESYKKSIEMNPKFLKSLTNLGDLCIEQNLADEGIECFKKIIQIDPYSHYDHFQLAFLY 388

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RK 358
                +     +K   ++ E+N E   + + +  I  +    D+A +    A+++ P   
Sbjct: 389 QD--KDMNEEAVKTYKKVIELNPEYTNAYLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYY 446

Query: 359 EIFLLLAQIEQANSHNTDKI 378
           + +   A++ +   + T+ I
Sbjct: 447 KAYYRSAEVYELQGNTTEAI 466


>gi|86130600|ref|ZP_01049200.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85819275|gb|EAQ40434.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 673

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 100/317 (31%), Gaps = 44/317 (13%)

Query: 94  SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++  +     AR + + +   +    E  V L   +  L +  +  A +  E ++   +T
Sbjct: 60  ALGLSGESGKARTLFTNLKADYPTDFE--VGLNYAESLLWDSDFGAAKDFYETLVAKDST 117

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA-------VVQQYVLAKEWS 205
              A+         + + ++A  Y  KAL + P       +          Q   A ++ 
Sbjct: 118 SFSALLGYANTLSNLKEYDAAIAYVNKALTVQPGNANAAVSKKFMRLGKANQLTTAFQYD 177

Query: 206 RAITFLNQKKKN-AKEWNRNRAILLIARSLENADKG------------------------ 240
            AI  L    ++  K+     A+     + ++ +                          
Sbjct: 178 AAIQLLKSALEDMPKDQQIISALANTYIAKKDYENANTMYSKLSDTLTSQVGKSLVAHLQ 237

Query: 241 -DMIASYHDAIESLKLCDNSIMASICAAKSLISQ----NK---KRKAEVILEKIWKVNPH 292
            D   +   A ES+          I A +  I       K    R A   L+  +  N  
Sbjct: 238 KDDKLALSLAQESIAFAKADTTKIITANERYIQALIWNGKYATARTAITDLKSTFPTNAR 297

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                    + +      ++    + E +  S +  + ++      G++D+A+A A   +
Sbjct: 298 VAALKATLGMYTGTFKKSIEVYNGILEKDSASFDGNLGIANAYRAQGNLDEAYAFAKNTL 357

Query: 353 KIAPRKEIFL-LLAQIE 368
              P ++    L+  IE
Sbjct: 358 TFYPNQKDATGLMKTIE 374


>gi|197102006|ref|NP_001125315.1| pre-mRNA-processing factor 6 [Pongo abelii]
 gi|55727663|emb|CAH90585.1| hypothetical protein [Pongo abelii]
          Length = 941

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 96/295 (32%), Gaps = 42/295 (14%)

Query: 134 RQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            + +   E LE +LQ      P      +          GD+ +A+     A   +P++ 
Sbjct: 584 GKNHGTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLTGDVPAARSILALAFQANPNSE 642

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAILLIARSL 234
            +  A V+      E+ RA   L + + +A                     A  L   +L
Sbjct: 643 EIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEAL 702

Query: 235 EN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +                 K  M  +     + LK C +S    +  ++      +  + 
Sbjct: 703 RHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRT 762

Query: 280 EVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALE 337
             ILEK    NP +P +      L     +  +  A  L     +E   S ++ S+ A+ 
Sbjct: 763 RAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIF 819

Query: 338 MGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           + +  Q   K++ A+K       + L +A++  +      K   W    +    D
Sbjct: 820 LEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 873



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++     +   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQFVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|70989773|ref|XP_749736.1| mRNA splicing factor (Prp1/Zer1) [Aspergillus fumigatus Af293]
 gi|66847367|gb|EAL87698.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus fumigatus
           Af293]
          Length = 926

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 104/300 (34%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G+++ A+R   +A + +
Sbjct: 578 AADLERNHGSKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQN 636

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240
           P+   +  A V+    A +  +A   L   ++ A         +   R L N D+     
Sbjct: 637 PNNEDIWLAAVKLEADADQTDQARELLATARREAGTDRVWIKSVAFERQLGNIDEALDLV 696

Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                                        +        + C  S+   + A++       
Sbjct: 697 NQGLQLYPKADKLWMMKGQIYEYQNKYPQAREAYSTGTRACPKSVPLWLLASRLEEKSGA 756

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     + +A  L     +E   S ++ S+
Sbjct: 757 VVKARSVLDRARLAV--PKSAELWTESVRVERRANNIGQAKVLMAKALQEVPTSGLLWSE 814

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +A +      K+     +F+ +A+I        +K + W + A+ +  D
Sbjct: 815 SIWHLEPRAQRKARS-LEAIKKLENDPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 872


>gi|197120873|ref|YP_002132824.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K]
 gi|196170722|gb|ACG71695.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K]
          Length = 1144

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 7/248 (2%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                     + + +     A  +   A       L   A       +L   +   GDL 
Sbjct: 712 ALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEALARDAAAVEPRVALGRLALARGDLP 771

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A+    +A++  P  P    A+ +                   + A   +   A  ++ 
Sbjct: 772 AAREALAQAVEKGPRDPAAHAALGELRAAD----GDAAGAEAAYRAALALDAEHAAAVLG 827

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +     +GD+ A+    + +L L   S  A +       S     KAE  L     + P
Sbjct: 828 LARLAQARGDVAAAREGLVRALALEPRSAEAQLALGTLEWSARDLAKAEAALAIAVDLQP 887

Query: 292 HPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               A        L   +    +K           + E+ +   +  L  G    A  + 
Sbjct: 888 RNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRALLARGETPAALVRL 947

Query: 349 MLAMKIAP 356
             A++++P
Sbjct: 948 RKAVELSP 955



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 6/201 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +++A  ++P AR   +          +   +    ++  A+     A       L + 
Sbjct: 761 GRLALARGDLPAAR--EALAQAVEKGPRDPAAHAALGELRAADGDAAGAEAAYRAALALD 818

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           A    AV  L   +   GD+ +A+    +AL + P +     A+      A++    +  
Sbjct: 819 AEHAAAVLGLARLAQARGDVAAAREGLVRALALEPRSAEAQLALGTLEWSARD----LAK 874

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                  A +     A  L        ++GD  A+      +      +  A +   ++L
Sbjct: 875 AEAALAIAVDLQPRNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRAL 934

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
           +++ +   A V L K  +++P
Sbjct: 935 LARGETPAALVRLRKAVELSP 955



 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 81/280 (28%), Gaps = 22/280 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  ++A  +   A      +          +      + AL   + + A   LE +    
Sbjct: 516 GDAALARGDAVKAAAAFQRLGSLEQGPRAPMGL---ARAALLRGKPDEARPTLEKLAAAD 572

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           A    A   L   +   GD+  A+ +      ++P      +  +      +        
Sbjct: 573 AAYLPARLELAALAEAAGDVEGARTH------LAPVLADAAQPRLAPLERGRARMVEAAL 626

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI------ 264
           L++    A +  +     L A     A +  ++       ++      S   +       
Sbjct: 627 LDRSAATAADAEKALLAALDADPRLAAARAALVRQRLRRGDAAGAVAASDPVAAEAASDP 686

Query: 265 ----CAAKSLISQNKKRKAEVILEKIWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRL 317
                  ++L    +   A  + ++  +  P  P +  A       +             
Sbjct: 687 ALAAARVRALALAGRALDAAQLADQALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEA 746

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +  +VE  V + ++AL  G +  A      A++  PR
Sbjct: 747 LARDAAAVEPRVALGRLALARGDLPAAREALAQAVEKGPR 786


>gi|291613155|ref|YP_003523312.1| hypothetical protein Slit_0686 [Sideroxydans lithotrophicus ES-1]
 gi|291583267|gb|ADE10925.1| Tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 374

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 60/201 (29%), Gaps = 18/201 (8%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL    A     Y  A +    +L   A    A+  L   + + G  ++AQ Y  + L +
Sbjct: 192 LLGAYQAYQRGDYTTATQAYREVLAKDARNRDALLGLAAIAQQQGQEDAAQHYYRQLLVL 251

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P  P    A++     A            + K+          L  +     AD     
Sbjct: 252 DPKDPIAESALMAYAPDAGN-------TESRLKSLLAEQPRSGTLNFSLGNYYADISSWG 304

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +      +  L   +   +   A SL    K++ A    ++            +   + 
Sbjct: 305 DAQQYYFNAHTLEPTNAQFTFNLAVSLDHLGKRKLAAQYYQQA-----------LQLDVS 353

Query: 304 SENTVGKLKRALRLEEINKES 324
             +     +   RL+E+N   
Sbjct: 354 GHSGFDHAQAQQRLDELNPAH 374



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 13/172 (7%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL     +    +   A + +  V  +   + + L+ L    IA  + Q + A      +
Sbjct: 191 ALLGAYQAYQRGDYTTATQAYREVLAKDARNRDALLGL--AAIAQQQGQEDAAQHYYRQL 248

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQR--YATKALDISPDAPWVTEAVVQQYVLAKEW 204
           L +      A  +L   +   G+  S  +   A       P +  +  ++   Y     W
Sbjct: 249 LVLDPKDPIAESALMAYAPDAGNTESRLKSLLAE-----QPRSGTLNFSLGNYYADISSW 303

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             A  +      +  E    +    +A SL++   G    +     ++L+L 
Sbjct: 304 GDAQQYYFNA--HTLEPTNAQFTFNLAVSLDHL--GKRKLAAQYYQQALQLD 351


>gi|149923909|ref|ZP_01912297.1| putative lipoprotein [Plesiocystis pacifica SIR-1]
 gi|149815252|gb|EDM74799.1| putative lipoprotein [Plesiocystis pacifica SIR-1]
          Length = 1338

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 101/308 (32%), Gaps = 30/308 (9%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A    L R   +   +        L   L +  AL     + A    + +          
Sbjct: 403 AGWTELGRGGRARAMKLDGPVYAPLRAYLALDEALILDDTDAAEGFAQALSDRD---FEG 459

Query: 157 VY----SLYFESCRIGDLNS--------AQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +      L        D +          Q    +AL++ P        +++Q +   E 
Sbjct: 460 LAFPDAHLLLAQFERRDPSRGKSSSGVRQQTQLERALELDPGLKRAHLQLLEQRLNRGES 519

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           +  +      +    +      +L + R      +G  + S      +      +    +
Sbjct: 520 AEVVEAFEALEHTGNDS----LLLALLRYEAYRAEGSDVQSQAALEVAAAYHPTNCE--V 573

Query: 265 CAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-- 321
            AA+   ++++ + +AE  L ++ +  P     ++           +++ A  L      
Sbjct: 574 LAAQREQARDRGQIEAEDALVEVLERCP----GSLAMRARQATARQRIEAAKALWSEQLD 629

Query: 322 --KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
              + +E++  ++++A+  G+  +A A     +++AP + + ++      A     ++  
Sbjct: 630 RVPDDMEAMEALAQLAVTAGNYAEAIAWHDRILRLAPYRAVSMVALADLHAQLDAPEQAR 689

Query: 380 YWTQSALH 387
            +  +A+ 
Sbjct: 690 AFVLAAIE 697


>gi|326572372|gb|EGE22365.1| tetratricopeptide TPR_2 [Moraxella catarrhalis BC7]
          Length = 671

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 8/180 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +      +  RA+           E  +  A  +  R+L    +      S   A     
Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I A        +   +  +A  ++  I   +P  ++  I T ++      K    
Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373
             L+ + + +    V+ + I + +     A      A+ I P    F  L   I +A + 
Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314
            +    ++  A+    +   R+A  I +   +K N            +  E     L  A
Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              ++ N + + +   V+ +AL+ G  +QA A     +   PR ++  +L  I
Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258


>gi|326567034|gb|EGE17157.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 12P80B1]
 gi|326569561|gb|EGE19615.1| tetratricopeptide TPR_2 [Moraxella catarrhalis BC8]
          Length = 671

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 8/180 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +      +  RA+           E  +  A  +  R+L    +      S   A     
Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I A        +   +  +A  ++  I   +P  ++  I T ++      K    
Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373
             L+ + + +    V+ + I + +     A      A+ I P    F  L   I +A + 
Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314
            +    ++  A+    +   R+A  I +   +K N            +  E     L  A
Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              ++ N + + +   V+ +AL+ G  +QA A     +   PR ++  +L  I
Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258


>gi|192292805|ref|YP_001993410.1| Tetratricopeptide TPR_4 [Rhodopseudomonas palustris TIE-1]
 gi|192286554|gb|ACF02935.1| Tetratricopeptide TPR_4 [Rhodopseudomonas palustris TIE-1]
          Length = 715

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 96/289 (33%), Gaps = 13/289 (4%)

Query: 106 MHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
               +S ++      E  V L+  ++   + Q + A    + +L+       A++     
Sbjct: 5   RSKAISSRNASDKAYEPAVLLMRARVLHQQGQLDEARSAYKKVLKKAPDNFMALHFYALA 64

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             + G+     +   +AL   P +      +    +    ++ ++   ++          
Sbjct: 65  EYQSGNAELGIKTLKRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTL-- 122

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +    R L  +       +     ++++L  +          +L    +  +A    
Sbjct: 123 --MLAYANRGLALSALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGRYTEALESY 180

Query: 284 EKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +K  +++P  ++     A  Y  L   +    L    R   I K  V++ +  ++  L M
Sbjct: 181 DKAIEIDPLSDVAFMNRAGTYKDLKQLDKA--LASYDRALSIGKRPVQAGLARAETLLFM 238

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            ++  A A     +K+ P   I L L     A+  + +  +     AL 
Sbjct: 239 RNVKDAMATCTAVLKVEPNSAIALTLLGNCMASLGDAETAIALHSRALE 287


>gi|148654219|ref|YP_001274424.1| hypothetical protein RoseRS_0031 [Roseiflexus sp. RS-1]
 gi|148566329|gb|ABQ88474.1| TPR repeat-containing protein [Roseiflexus sp. RS-1]
          Length = 522

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 200 LAKEWSRAITFLNQKKK--------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           L  +++ AI                 A+ ++R RAI+ +      A + D   +  + +E
Sbjct: 41  LRADYANAIEHFKAALIAAYIEGEERAQIYDRERAIIYLYIGNALAYQEDWEGALREYLE 100

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
           +++       A      +  +Q +  +A    ++  + NP     H  +   Y  L  ++
Sbjct: 101 AVQTDPQLAEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNPRLYEAHFSLGRCYQRL--DD 158

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                    +  +   ++ E    +  +    G+ + A      A+++ P 
Sbjct: 159 AGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209



 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 94/280 (33%), Gaps = 27/280 (9%)

Query: 106 MHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY-SLY 161
                 ++   HN  L   +    +          A+    +     P   E   Y  L 
Sbjct: 127 RAIAAFKEAIEHNPRLYEAHFSLGRCYQRLDDAGRAYIHYDQACQARPQAAEPRYYMGLM 186

Query: 162 FESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAK--EWSRAITFLNQKKKN 217
            +    G    AQR   +AL + P   +P + + V+      +  +W   ++   +++  
Sbjct: 187 HQ--SHGAHELAQRCFAEALRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGY 244

Query: 218 AKEWNRNRAILLIARSLENADK------GDMIASYHDAIESLKLCDN----SIMASICAA 267
            +E  R    LL  R  E+  +              +A+E+           + A I  +
Sbjct: 245 EEEAERIYRALLQWRPEEHYARYLLGNLLARARRLDEALEAYAQIPPQDRYYVDARIRIS 304

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINK 322
             L  QNK R+A   L +  K+  HP    ++ ++           G +K   R  ++  
Sbjct: 305 AILKLQNKMREAYDTLFECAKL--HPTNGQLFLNMGKLLYDMNKHAGAVKAFERAVQLLP 362

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
              ++  ++  +   MG    A A    A+++AP      
Sbjct: 363 NDPQAHYLLGFMYNLMGREGWALAAWRKAVELAPDAHSLR 402



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 62/218 (28%), Gaps = 32/218 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             D   A R   +A+   P        +   +       RAI    +  ++        A
Sbjct: 88  QEDWEGALREYLEAVQTDPQLAEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNP--RLYEA 145

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              + R  +  D  D   +Y    ++ +    +            S      A+    + 
Sbjct: 146 HFSLGRCYQRLD--DAGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEA 203

Query: 287 WKVNPH---PEI-------------ANIYTHLLS-------ENTVGKLKRALRLEEINKE 323
            +V P    PE+             A  Y  L +       E    ++ RA  L +   E
Sbjct: 204 LRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGYEEEAERIYRA--LLQWRPE 261

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              +  ++  +      +D+A        +I P+   +
Sbjct: 262 EHYARYLLGNLLARARRLDEA---LEAYAQIPPQDRYY 296


>gi|91784833|ref|YP_560039.1| hypothetical protein Bxe_A0959 [Burkholderia xenovorans LB400]
 gi|91688787|gb|ABE31987.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 620

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 60/220 (27%), Gaps = 11/220 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A  ++  A +  E  L++      +  +L      +G    A     + L++ P   
Sbjct: 117 AYAAAGRHEDAADAFEKSLRLQPNDASSHNNLGNALHALGRHTEAIAAFRRTLELRPGHA 176

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +          + AI            +           +      G    +   
Sbjct: 177 GALNNMGMSLNALGRAAEAIPCFQTALAAEPRF----VAAHFNLANTFDATGRHADAVAS 232

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303
              +L L  N   A      +L +  +  +A   LE+   ++P   +A       +  L 
Sbjct: 233 FRAALSLQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALG 292

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +     +     +   +  +   + +  +   L +    +
Sbjct: 293 AHGPAVRA--FDQALRLRPDLASAHMNRALAWLALRDFAR 330


>gi|28868406|ref|NP_791025.1| hypothetical protein PSPTO_1193 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28851644|gb|AAO54720.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|331015315|gb|EGH95371.1| hypothetical protein PLA106_05102 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 654

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 17/208 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD  +A   A  A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL  R       GD   +  D  ++  L   ++      A    +  + ++A   L
Sbjct: 246 NDATLLAQRGQLRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPKEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVESLVIVSK 333
           +K        P  E+   Y    + +  G L   KR  R   +      ++  S +  S 
Sbjct: 303 QKARDAGQLQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYSAMRSSD 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            A  +    +            P +++F
Sbjct: 363 DAQAITYFKRVLEYQQAGDLQMPDQQVF 390



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 41/248 (16%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--- 220
           +    D + A   A +AL    DA  + + +            A+   ++ +++  +   
Sbjct: 44  AYNRKDYDLAIAKAREALRQRGDAEQLHDLI------------ALAERDKYRRDHPQRFP 91

Query: 221 -WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                   +   ++L    + D   S + A +++     ++   +   ++L  Q +  +A
Sbjct: 92  KARVKPGYVEGNQALRAYARRDYDGSANHARKAIAQAPKNLDYRMMLIEALQRQQRLDQA 151

Query: 280 EVILEKIWKV-NPHPEI----------------ANIYTHLLSENTVGKLKRALRLEEINK 322
           +V +    +   P P +                A  Y  L   +    +  A        
Sbjct: 152 QVAINDAEQAVGPQPVLTRRRQAIQEQVAVNKAAAGYKALARGDNETAVSEARDAVRSFP 211

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN----SHNTDKI 378
           + +    ++    +  G   +A + A  A+ +        LLAQ  +        + D  
Sbjct: 212 KQMAYRKLLVSALIAQGQYAEARSAATEALALNGND--ATLLAQ--RGQLRQRLGDQDGA 267

Query: 379 LYWTQSAL 386
                 AL
Sbjct: 268 RQDFAQAL 275


>gi|330862164|emb|CBX72327.1| cellulose synthase operon protein C [Yersinia enterocolitica
           W22703]
          Length = 687

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138
           GL    A +   A ++     +       +     L+      LL  E   AL      +
Sbjct: 300 GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTAL 359

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   QI  +  +A+  L   +    D  +A+++  +AL + P        +   Y
Sbjct: 360 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 419

Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  +A+ +LN     Q+ K     N  +  +L  ++   A +     +     ++ 
Sbjct: 420 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAETLAAQQQWHQAAEKYRQAQ 478

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           K+  N +  +   A++L       +A+ 
Sbjct: 479 KMAPNDVWITYRLAQALAQDGHLAQADA 506


>gi|298244613|ref|ZP_06968419.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552094|gb|EFH85959.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 853

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 76/213 (35%), Gaps = 35/213 (16%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
             + + Q      ++ +AIT   +            A+    ++    + G+   +  + 
Sbjct: 410 AYQRLEQFQAALADFQQAITLFPR-----------FALAYANQAGVYRELGEFQKAQDNI 458

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS----- 304
            ++L+L    ++A    A  L    +  +A   +    ++NPH    + +  L       
Sbjct: 459 QQALELEPTLVLAYNEQAMLLHKLGRHEEALACIRHAQEINPHD--THTWVALGGISYDL 516

Query: 305 -ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR------ 357
            E    ++     L E+   S +   ++  I++++G   +A  +   A K+ P       
Sbjct: 517 EEYEQARIAFTRAL-ELEPASADGWYLLGCISIKLGDYSRALEELSQAAKVRPTYTRAYH 575

Query: 358 KEIFLL---------LAQIEQANSHNTDKILYW 381
           +   LL         L + E+A + +     YW
Sbjct: 576 ERALLLYTLQQYEQALVEFEKAFALDPTNAKYW 608



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 86/251 (34%), Gaps = 23/251 (9%)

Query: 118 NEYLVYLLEVQIALA--ERQYNIAHEK-LEMMLQIPA-TREFAVYSLYFESCRIGDLNSA 173
            E    L   Q  +    ++Y  A E     +   P     +A  +L      + D  +A
Sbjct: 295 QEASAQLWADQALVLHDAKRYEEAKETCSRALALNPRFYEAYAHRALI--KYELKDYAAA 352

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                  ++ +PD     +     Y   +++ +AI      + +  E +   A++   R 
Sbjct: 353 LEDLNHVVEFAPDLQVAYKYRALVYHKLEQFEQAI----ANQTHILERDDADAVMYNNRG 408

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                     A+  D  +++ L     +A    A       + +KA+  +++  ++ P  
Sbjct: 409 YAYQRLEQFQAALADFQQAITLFPRFALAYANQAGVYRELGEFQKAQDNIQQALELEPT- 467

Query: 294 EIANIYTH--------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            +   Y             E  +  ++ A    EIN     + V +  I+ ++   +QA 
Sbjct: 468 -LVLAYNEQAMLLHKLGRHEEALACIRHAQ---EINPHDTHTWVALGGISYDLEEYEQAR 523

Query: 346 AKAMLAMKIAP 356
                A+++ P
Sbjct: 524 IAFTRALELEP 534



 Score = 36.5 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            +   A+   T+AL++ P +      +    +   ++SRA+  L+Q  K    + R    
Sbjct: 517 EEYEQARIAFTRALELEPASADGWYLLGCISIKLGDYSRALEELSQAAKVRPTYTR---- 572

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               R+L          +  +  ++  L   +          L+          +L ++ 
Sbjct: 573 AYHERALLLYTLQQYEQALVEFEKAFALDPTNAKYWSEFTSLLLKLGGNDLVRDMLLRV- 631

Query: 288 KVNPHPEIANIYTHLLSENTV-GKLKRALRLEE----INKESVESLVIVSKIALEMGSID 342
            +  HP ++  +  L S +    +   A +        N  +  +  + +   LEM   +
Sbjct: 632 -IQRHPTLSEAWFQLASCSAYNDRFVSAHQQYSRALKFNPHNAFAYAMRALCNLEMKHYN 690

Query: 343 QA-----HAKAMLAMKIAP 356
            A      A A+      P
Sbjct: 691 SALVDCRRASALDPEHYLP 709


>gi|68250245|ref|YP_249357.1| tetratricopeptide repeat protein [Haemophilus influenzae 86-028NP]
 gi|145630848|ref|ZP_01786625.1| hypothetical protein CGSHi22421_02601 [Haemophilus influenzae
           R3021]
 gi|229846874|ref|ZP_04466981.1| hypothetical protein CGSHi7P49H1_02598 [Haemophilus influenzae
           7P49H1]
 gi|68058444|gb|AAX88697.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae
           86-028NP]
 gi|144983508|gb|EDJ90976.1| hypothetical protein CGSHi22421_02601 [Haemophilus influenzae
           R3021]
 gi|229810363|gb|EEP46082.1| hypothetical protein CGSHi7P49H1_02598 [Haemophilus influenzae
           7P49H1]
          Length = 396

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE + + NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVEILENVLEQNPDYTGEILSP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + + K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKNPSTLIFHRFMQYQIDDAEDG 339


>gi|149919865|ref|ZP_01908341.1| hypothetical protein PPSIR1_12208 [Plesiocystis pacifica SIR-1]
 gi|149819312|gb|EDM78745.1| hypothetical protein PPSIR1_12208 [Plesiocystis pacifica SIR-1]
          Length = 375

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 115/348 (33%), Gaps = 40/348 (11%)

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIP- 101
            ++  L   L  + + +         P         R     Y+        +A  +   
Sbjct: 3   FVIIALVCLLVGFGVGWWYV-----APQRAAVEHLARRKRVLYE--------LAEGDREN 49

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATREFAV 157
           +A+++      +     +  V+L    +     +   A      +L         R  A+
Sbjct: 50  VAQELERICETE---PGDPTVFLALAALDRRRGRIERAKAVHRTVLASADLPAEQRVAAL 106

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
             L  +     +  +A     +A+ ++P +    E +   +++    +  + A   L ++
Sbjct: 107 VGLGRDLLAENNERAAVGALVRAVSLAPRSVATLETLARALERAGAWERAAAAWERLEKQ 166

Query: 215 K--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              + A +    R   +  ++ E  + G    +   A  ++ L  +S       A+   +
Sbjct: 167 VEGRRALDARVGRGHAVAGQASEALEDGVDKKARKLAERAVDLAPDSGHCWAVRARVESA 226

Query: 273 QNKKRKAEVILEKIWKVNPH------PEIANIYTHLLS-ENTVGKLKRALRLEEINKESV 325
                +A    ++ W+++P       PE     +      + + ++  +LR+        
Sbjct: 227 LGDPGEALESWQRAWELSPAGARSIVPEAWEWASENRRHGDLMERMLSSLRIAR------ 280

Query: 326 ESLVIVSKIALEMGSI-DQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           E L++V+          DQA A      + +P  ++ L+  ++ +   
Sbjct: 281 EPLLVVALAEKVARQHPDQAAAALDRVAERSPAAQLSLVRLRLSRGQR 328


>gi|242015374|ref|XP_002428334.1| pre-mRNA splicing factor, putative [Pediculus humanus corporis]
 gi|212512930|gb|EEB15596.1| pre-mRNA splicing factor, putative [Pediculus humanus corporis]
          Length = 935

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 106/310 (34%), Gaps = 46/310 (14%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            D+ +  L    M  +      AR    Y     TF +E  ++L   + A  E + +   
Sbjct: 531 EDRKHAWLEDAEMCASQGAFECAR--AIYAHALSTFPSEKSIWL---RAAYFE-KAHGTR 584

Query: 141 EKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           E LE +LQ      P +    +          G++++A+     A   +P++  +  A V
Sbjct: 585 ESLEALLQRAVAHCPKSEVLWLMG-AKSKWLAGNVSAARSILALAFQANPNSEEIWLAAV 643

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-------------- 241
           +      E+ RA   L   + +A           +  +L + DK                
Sbjct: 644 KLESENSEYERARRLLANARASAPSPRVLMKSAKLEWALNDLDKAHKLLEEAIKMFPDYP 703

Query: 242 ---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                          +  +       +K C +S+      A     +    +A  +LEK 
Sbjct: 704 KLWLMKGQIEEQQNMVDKALETYNLGIKKCPSSVPIWRLLANLEERRGLLTRARSVLEKG 763

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIVSKIALEMGSIDQA 344
              N  P+ A ++   +   +   LK      + +  +E   S ++ ++ A+ M S  Q 
Sbjct: 764 RLRN--PKNAELWLEAIRIESRAGLKDIANNLMAKALQECPNSGILWAE-AIFMESRPQR 820

Query: 345 HAKAMLAMKI 354
             K++ A+K 
Sbjct: 821 KTKSVDALKK 830



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 66/193 (34%), Gaps = 15/193 (7%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              W+ +A  +       +  A                     +  R+           S
Sbjct: 534 KHAWLEDA--EMCASQGAFECARAIYAHALSTFPSEKS-----IWLRAAYFEKAHGTRES 586

Query: 246 YHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLL 303
               ++ ++  C  S +  +  AKS         A  IL   ++ NP+ E I      L 
Sbjct: 587 LEALLQRAVAHCPKSEVLWLMGAKSKWLAGNVSAARSILALAFQANPNSEEIWLAAVKLE 646

Query: 304 SENTV-GKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           SEN+   + +R   L      +    V++  +K+   +  +D+AH     A+K+ P    
Sbjct: 647 SENSEYERARRL--LANARASAPSPRVLMKSAKLEWALNDLDKAHKLLEEAIKMFPDYPK 704

Query: 361 FLLL-AQIEQANS 372
             L+  QIE+  +
Sbjct: 705 LWLMKGQIEEQQN 717



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 72/210 (34%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 282 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPKSEDLW- 340

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++++    S+   I AA      N KR    +  K 
Sbjct: 341 -------LEAARLQPPDTARAVIAQAVRHIPTSVRIWIRAADLEAETNAKR---RVYRKA 390

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    +V+  + ++++     + + A
Sbjct: 391 LEHIPNSVRLWKAAVELEDPEDARILLSRA---VECCPTNVDLWLALARL----ETYENA 443

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 444 RKVLNKARENIPTDRQIWTTAAKLEEANGN 473


>gi|159129145|gb|EDP54259.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus fumigatus
           A1163]
          Length = 926

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 104/300 (34%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G+++ A+R   +A + +
Sbjct: 578 AADLERNHGSKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQN 636

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240
           P+   +  A V+    A +  +A   L   ++ A         +   R L N D+     
Sbjct: 637 PNNEDIWLAAVKLEADADQTDQARELLATARREAGTDRVWIKSVAFERQLGNIDEALDLV 696

Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                                        +        + C  S+   + A++       
Sbjct: 697 NQGLQLYPKADKLWMMKGQIYEYQNKYPQAREAYSTGTRACPKSVPLWLLASRLEEKSGA 756

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     + +A  L     +E   S ++ S+
Sbjct: 757 VVKARSVLDRARLAV--PKSAELWTESVRVERRANNIGQAKVLMAKALQEVPTSGLLWSE 814

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +A +      K+     +F+ +A+I        +K + W + A+ +  D
Sbjct: 815 SIWHLEPRAQRKARS-LEAIKKVENDPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 872


>gi|323699303|ref|ZP_08111215.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           sp. ND132]
 gi|323459235|gb|EGB15100.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 486

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 13/159 (8%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           ++ I  L        E  R              D  + +A+   +   L L  +S     
Sbjct: 132 NKVIEELAAAISPPMELRRQMEHC-----RSLLDAHNYVAALAASDRILSLRPDSARGLA 186

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP---HPE--IANIYTHLLSENTVGKLKRALRLEE 319
               +L+   +   A        + NP    P   +A  +  +  E  +  LK    L  
Sbjct: 187 MRGDALMGTGRVDAAVQAYMAAHEANPIFMAPLAKLAEAFRDMEDERALAYLKELDTLSP 246

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +N    E  + +++  L  G  +QA      +++ A R+
Sbjct: 247 LNP---ERKIDIAEQHLRQGQHEQAERYLDQSVQAAERE 282


>gi|217967766|ref|YP_002353272.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724]
 gi|217336865|gb|ACK42658.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724]
          Length = 870

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 13/126 (10%)

Query: 140 HEKLEMMLQIPATREFAV-------YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
               + + +    +E  +         L  E+ +  D NSA  Y  KAL++ P++P +  
Sbjct: 731 RVIYKQLGKEDKLKEIKIDERVYIQRGL--EAYKNKDYNSAFDYFKKALELKPNSPEIMN 788

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +     ++  +  AI +  +  +  K++ +    L+ A       KGD+ ++     E 
Sbjct: 789 NIGAVLFMSGRYDEAILWFKKALETKKDYVQAYGNLVYAY----LQKGDLFSAEVVLNEG 844

Query: 253 LKLCDN 258
           LK   N
Sbjct: 845 LKYAPN 850


>gi|159899986|ref|YP_001546233.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893025|gb|ABX06105.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1161

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 96/321 (29%), Gaps = 58/321 (18%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                 AR+       +          L   +    ER+++ A      +L   +T   A 
Sbjct: 839  GRFEAAREQERAAIARDADGVYIEAQLGIAESFRRERRFDEAITAYNEILDNDSTIIPAY 898

Query: 158  YSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQ----------------- 196
              L   +   G+   A  Y  +AL   P+      W+ +A+V+                 
Sbjct: 899  IGLGRTAADRGEWQVAIGYYNQALAREPNSTNAHFWLGQALVEQGFYERALDEFNLVLAT 958

Query: 197  ---------------------------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
                                             + + A   L++       +  N A  L
Sbjct: 959  DPNNAEALFGAGRAYCNMAINSYAYDPAQAAEYD-AEARRLLDRAL----NYRPNDARAL 1013

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              R   N  +  M A+  D   + +L   +  A     K  +SQN  + AE  L++  + 
Sbjct: 1014 FERGKLNERQNQMAAAISDYGRAAQLDAQNSEALYLQGKLYLSQNNLQAAEEALDQSVRR 1073

Query: 290  NPHPEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            N + +   +Y    +     +    +K   R   +N    E+       A E   ID A 
Sbjct: 1074 NQN-DPTALYWLGRTYRAQNRTNDAIKSFERALSLNGNFHEARYYQGLTAEEANQIDLAR 1132

Query: 346  AKAMLAMKIAPRKEIFLLLAQ 366
                L  + A   + + L A+
Sbjct: 1133 EAYHLISQQASPDDRWRLQAE 1153



 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 53/192 (27%), Gaps = 34/192 (17%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G   SA+    +AL++          + +      +++ A        +    +    
Sbjct: 700 QAGQDQSAEDIFLRALNVDSSNASAAYEIGRLRQNRGDYAGAEKAYQVATEINTSYVEAH 759

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L    +       + +A+Y  AI++      +        +  +   +  +A   LE+
Sbjct: 760 LALGQLYARYLDQPDNAVAAYQRAIDAGGEDPRNFED---MGREFLEIGRYSEAADALEQ 816

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                                             +N    ES   +++  LE G  + A 
Sbjct: 817 S-------------------------------VRLNPNVPESRHYLAQAYLEQGRFEAAR 845

Query: 346 AKAMLAMKIAPR 357
            +   A+     
Sbjct: 846 EQERAAIARDAD 857



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 65/218 (29%), Gaps = 19/218 (8%)

Query: 162  FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             E   IG  + A     +++ ++P+ P     + Q Y+    +  A            + 
Sbjct: 799  REFLEIGRYSEAADALEQSVRLNPNVPESRHYLAQAYLEQGRFEAAREQERAAIARDADG 858

Query: 222  NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                A L IA S     + D   +     E L      I A I   ++   + + + A  
Sbjct: 859  VYIEAQLGIAESFRRERRFD--EAITAYNEILDNDSTIIPAYIGLGRTAADRGEWQVAIG 916

Query: 282  ILEKIWKVNPHPEIANIYT--HLLSENTVGK-LKRALRLEEINKESVESLVIVSKI---- 334
               +     P+   A+ +    L+ +    + L     +   +  + E+L    +     
Sbjct: 917  YYNQALAREPNSTNAHFWLGQALVEQGFYERALDEFNLVLATDPNNAEALFGAGRAYCNM 976

Query: 335  ALE--------MGSID-QAHAKAMLAMKIAP-RKEIFL 362
            A+             D +A      A+   P       
Sbjct: 977  AINSYAYDPAQAAEYDAEARRLLDRALNYRPNDARALF 1014


>gi|114052114|ref|NP_001039840.1| pre-mRNA-processing factor 6 [Bos taurus]
 gi|86820928|gb|AAI05319.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Bos
           taurus]
 gi|296481160|gb|DAA23275.1| PRP6 pre-mRNA processing factor 6 homolog [Bos taurus]
          Length = 941

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNLVAAQE 696

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L++                 +  +  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S V+ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ASTLMAKALQECPNSGVLW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|300868210|ref|ZP_07112842.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506]
 gi|300333834|emb|CBN58026.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506]
          Length = 539

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 75/255 (29%), Gaps = 19/255 (7%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVT 191
             ++  A       L++        +    E   + G L  A     +A +++P++ W  
Sbjct: 25  SGKWEEAAAAYRRCLELNP-DFSWYHHNLGEVLAQQGKLEEAGDCYQRACELNPNSAWSW 83

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             + +       W  A+    +  +   ++         +       +G +  +     +
Sbjct: 84  HGLGEMLERQGNWDGAVAAYRRAVEIYPDFYE----FHNSLGKALCFQGQLEEALGCLRQ 139

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----EN 306
           +++L   S +      + L    +  +    L +   +N  P    +Y  L         
Sbjct: 140 AIELDAESALPYENLWEVLARLGQVDEGIECLRQAIALN--PGSWELYMKLAEALQGKNE 197

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               L    +  ++N +       +       G  ++A A    A ++ P        A 
Sbjct: 198 LQEALAGYGKAIQLNPDFYWLRYKLGTALAATGQWEEAIASYKQAAELEPGA------AI 251

Query: 367 IEQANSHNTDKILYW 381
           +     H    +  W
Sbjct: 252 VHHYLGHTLAIVQRW 266



 Score = 40.3 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 78/252 (30%), Gaps = 26/252 (10%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDA 187
              A  Q+  A    +   ++        + L +  +       +   Y  K L++SP++
Sbjct: 225 ALAATGQWEEAIASYKQAAELEPGAAIVHHYLGHTLAIVQRWEEAIVSY-KKTLELSPES 283

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             V + +       + WS A+    +  K   E N       +  +L    + D   +  
Sbjct: 284 AVVYQHLGDALARLQRWSEAVASYRKSVK--LEPNSLEGQDHLGFALTQLQQWD--EAIG 339

Query: 248 DAIESLKLCDNSIMASICAAKSLISQN---KKRKAEVILEKIWKVNPHP-EIANIYTHLL 303
              ++L+L  NS +       +L  +       +A     K  ++ P+  EI      + 
Sbjct: 340 CYRKALELSPNSDVVYCHLGDALRQRGTEQDLDEAASCYHKAIELTPNNLEICQKVLEMK 399

Query: 304 SENTVGKLKRALRLEE----------------INKESVESLVIVSKIALEMGSIDQAHAK 347
             +   + +    L                  I  ++ E   ++ +     G   QA   
Sbjct: 400 PIDHEAQFQLGQALAAQGQWQQAIEAYVLYIDIKPDNYEVHHLLGEALAARGQWQQAIEA 459

Query: 348 AMLAMKIAPRKE 359
              A+ + P   
Sbjct: 460 YRRAVDLDPNSS 471


>gi|302903061|ref|XP_003048776.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729710|gb|EEU43063.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 821

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 105/312 (33%), Gaps = 24/312 (7%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY +L              A  + + +S      N   V     +    +  Y  A +  
Sbjct: 500 GYYSLSQ---------FQCAESVQALMSLPLAHQNTPWVLAQMGRAHYEQASYADAEKFF 550

Query: 144 EMMLQIPATRE--FAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
             M     +R     VYS + +   R  DL+     A + +D +  +P    A+   + L
Sbjct: 551 RKMRVQAPSRLEDMEVYSTILWHLKRETDLS---FLAHELVDSAWLSPQAWCALGNAWSL 607

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A+++ +A+    +  +   ++    A     +  E+    +   +     +++       
Sbjct: 608 ARDYEQALKCFKRATQLDPKF----AYAFTLQGHEHVANEEYDKALTAYRQAISADRRHY 663

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRL 317
            A     K         KA         +NP+  +       + E        L+   + 
Sbjct: 664 NAYYGIGKVQERLGALDKAYAHFHAAQMINPNNAVLICCIGTVLEKQKQIMPALQAYSKA 723

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTD 376
            E+   + ++    ++  L +G +D A  + M+   +AP    +  LL ++ ++      
Sbjct: 724 VELAPRAAQTRYKKARALLAVGQLDAAQKELMVLKDLAPDEATVHFLLGKLYRSMGEKQL 783

Query: 377 KILYWT-QSALH 387
            + ++T   AL 
Sbjct: 784 SVRHFTIALALD 795


>gi|303249434|ref|ZP_07335654.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ]
 gi|302489159|gb|EFL49131.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ]
          Length = 209

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 6/168 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +A+ +   A  +    ++   +       L   +   GDL+    +  KA    P   
Sbjct: 35  AYVAKGRLIEAEAEFHQAVECSPSLAEGFVQLGGLAMNKGDLDGCLEWNEKACQARPLFA 94

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                    ++   E  +A   L +  K   ++ +  A L  A       KGD+  + + 
Sbjct: 95  VPYGNTGFVHLQRGEVDKAEKALRRAIKIDPKYVQAMATLGSA----LFMKGDLEGAEYH 150

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV--NPHPE 294
           + ++L++      A    A   + + +  KA+ ++E+  K    PHP+
Sbjct: 151 STKALEIEPMFGPAINNLALVAMERGEFAKAKELVERARKTGYEPHPD 198


>gi|218510672|ref|ZP_03508550.1| hypothetical protein RetlB5_26548 [Rhizobium etli Brasil 5]
          Length = 460

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 66/228 (28%), Gaps = 37/228 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149
           G++  AA +   A+    Y+     +      +     +       + A       +   
Sbjct: 232 GVILKAAGDRTAAQ--ARYLDAIRLWPQYPEAHYNFAILLEETGHPDEAAAHYRQALKCR 289

Query: 150 PA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQ----QYVL 200
           P        +  L+ E    GD   A  +  +AL + P            ++        
Sbjct: 290 PDHVDALLRLAGLFDE---WGDQFEAHHHFREALRLRPGFAEAHNNFGVFLEKNGDAQAA 346

Query: 201 AKEWSRAIT--------------FLNQKKKNAKEWNRNRAILLIARSLE--------NAD 238
              + +A+                L  +   A E +   A+  +    E          +
Sbjct: 347 ESHYRQALQLRPDYAEAHYNYAMLLEGRDVEAAELHYRAALSSLPMYAEAHNNLGVLLHE 406

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           KG +I +    + +++L  +        A  L +  ++ +A+    K 
Sbjct: 407 KGALIEARSHYLTAIRLRPDDPQIYRNLALLLAAMGEEEQADRYARKA 454



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 56/184 (30%), Gaps = 12/184 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            KAL++  D P     +      A +     T    +  +A              ++   
Sbjct: 215 EKALELRADYPEAHNNLGVILKAAGD----RTAAQARYLDAIRLWPQYPEAHYNFAILLE 270

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292
           + G    +     ++LK   + + A +  A        + +A     +  ++ P     H
Sbjct: 271 ETGHPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHHFREALRLRPGFAEAH 330

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                ++     +    +      L ++  +  E+    + + LE   ++ A      A+
Sbjct: 331 NNFG-VFLEKNGDAQAAESHYRQAL-QLRPDYAEAHYNYAML-LEGRDVEAAELHYRAAL 387

Query: 353 KIAP 356
              P
Sbjct: 388 SSLP 391


>gi|254179720|ref|ZP_04886319.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
 gi|184210260|gb|EDU07303.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
          Length = 1454

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 777 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAAQAYLDR 829

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 830 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 889

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 890 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 949

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 950 LERRDDAIAA--LQRALE 965



 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             R  D   A + A +A+ ++PD         +  +   ++  A++   + ++   +   +
Sbjct: 880  RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 939

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A L+ A +     + D IA+   A+E          A     +  +   +  KA  + +
Sbjct: 940  YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 995

Query: 285  KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +   V  H E+A+        Y +L + +     L+RA    EI   + E+L  +  +  
Sbjct: 996  R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1050

Query: 337  EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             +  + ++      A+ I     + + LA
Sbjct: 1051 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1079


>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1979

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 92/262 (35%), Gaps = 43/262 (16%)

Query: 133 ERQYNIAHEKLEMMLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--P 188
           E +Y  A +  + ML+  P   +   +          G +  A     ++L+  P+    
Sbjct: 392 EGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKL--GRIEEALDSLAQSLEKEPENYGL 449

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIAR---SLENADK- 239
           W+ + ++   +   ++  A+  L +  +   +      N+  A+  + R   +LE+ ++ 
Sbjct: 450 WLQQGLI--LLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEG 507

Query: 240 ---------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                                G    +     +++ L  +   A       L++ +   K
Sbjct: 508 LRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEK 567

Query: 279 AEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           A    +++ K NP  ++ +IY      L    T   L+   ++  +N +  + L  ++  
Sbjct: 568 ASEAFDEVLKTNPE-DLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVA 626

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
             ++G  ++A           P
Sbjct: 627 QAKLGKQEEALETFEKLAAKNP 648



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 13/196 (6%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRA 226
              A     + L ++P                     A+    +      ++    +NR 
Sbjct: 497 YEEALEDFEEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRG 556

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           ++L+A         D   +     E LK     + +      +L+   K   A    EKI
Sbjct: 557 LILLA-------VDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKI 609

Query: 287 WKVNP-HPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             +NP +P++  +              L+   +L   N E ++      K A+E+G  D 
Sbjct: 610 LSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDT 669

Query: 344 AHAKAMLAMKIAPRKE 359
           A       +   P   
Sbjct: 670 ALQAFDQVLSEKPESR 685



 Score = 43.4 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 83/261 (31%), Gaps = 43/261 (16%)

Query: 135 QYNIAHEKLEMMLQ-IPATREFAVY-SL-YFESCRIGDLNSAQRYATKALDISPD----- 186
           +Y  A +    +L+  P  +E  +   L   +  R+ D   A +   +A+ + P      
Sbjct: 258 RYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLND---AIKAFEEAIKLDPTYFEAW 314

Query: 187 ---------------APWVTEAVVQQYVLAKE-W-SRAITFL------NQKKKNAKEWNR 223
                          A    ++V++ Y   KE W +RA+  +         K  ++    
Sbjct: 315 NYKCLALMKLEVYEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSFSRTAEL 374

Query: 224 NRAI--LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           + A    L  +    A +G    +       L+     I A       LI   +  +A  
Sbjct: 375 DPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALD 434

Query: 282 ILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            L +  +    PE     +      L +      LK   ++ E+  ++    +       
Sbjct: 435 SLAQSLEKE--PENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALY 492

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
            M   ++A       +++ P 
Sbjct: 493 SMDRYEEALEDFEEGLRLNPY 513


>gi|312212753|emb|CBX92836.1| similar to N-alpha-acetyltransferase 15 [Leptosphaeria maculans]
          Length = 836

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 57/162 (35%), Gaps = 12/162 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y  A +  +  L+I       +  L    C+I D         K +   P       A
Sbjct: 91  KNYEEAIKAYKFALRIEPNSLNILRDLALLQCQIRDYEGYIESRRKMMQERPQLRQNWTA 150

Query: 194 VVQQYVLAKEWSRAITFLN------QKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           +   Y LA  ++ A   LN      ++     +   + A L   ++   A+ GD+  +  
Sbjct: 151 LAVAYHLAGNYAEAENILNTYEGTLKQTPPKSDLEHSEATL--YKNTVIAESGDVERALK 208

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              E L+   +   A    A  L+   +K +A    EK ++ 
Sbjct: 209 HLEEVLRHSLDRTSALELRATYLLQLGRKEEA----EKAYRT 246


>gi|302338865|ref|YP_003804071.1| hypothetical protein Spirs_2362 [Spirochaeta smaragdinae DSM 11293]
 gi|301636050|gb|ADK81477.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 647

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 96/297 (32%), Gaps = 48/297 (16%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
              +  Y +    L  GL+ I   +   A+ +   +  +                  AE+
Sbjct: 65  YFKEGEYQRALDLL-DGLL-IENGDDQDAKDLRDQIIAERK---------------QAEK 107

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-----DAPW 189
           +   A  + +  L+   +          +S +  + ++A++   + L+            
Sbjct: 108 KAADAERQSQEALKDTLSDL-------GQSLKSSETSAAEQERDRQLEAKRQEELRKLED 160

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
             +A  ++     +   A+    ++K    +        L+ +  E  D+ D I +    
Sbjct: 161 QRKAAEERQRQEADRLAALDKAEREKAEKLK-------NLVRQGEEAMDQKDYIGARGFF 213

Query: 250 IESLKLCDNSIMASICAAKSLISQN-----KKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
            E+L +  +S  A     ++   ++       +KA     +  + +  P +   Y  L  
Sbjct: 214 SEALDIDPSSAPALANTGETFFREDENSDSNIKKAVDYANRAIQSD--PNLWVPYNTLGK 271

Query: 305 ENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +  +     +    +   +N E+ + L  + K     G  D A      A+ I P
Sbjct: 272 VYSKQRQWNNAIDSYKQAARLNPENADLLFELGKAQYRAGKYDDARQSFEAAIHIDP 328



 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 85/297 (28%), Gaps = 41/297 (13%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A     AR+           H +  + L   Q  L     N A        QI    + A
Sbjct: 310 AGKYDDARQSFEAAIHIDPQHEKAYLNLGVTQRRL--GNVNAAINAFGKAAQINKESDVA 367

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD-------APWVTEAVVQQYVLAKEWSRAI- 208
            Y L     + GD+  A     KA  + PD             A+ +       + RAI 
Sbjct: 368 FYQLGELYKQKGDMKQASENYQKAAALQPDRNIYQGSYAVALTALGKYQEAEAAYKRAIA 427

Query: 209 -----------------------TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                                         K A + + + A+ L    L +   G+   +
Sbjct: 428 ADSEDPVARYNIALVQLQLGKDNDAFENAAK-AVQLDSSSAVYLYTLGLTSEAVGNSDGA 486

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300
                 S+      +   I   K    Q K  +A   L   + ++P     +  + N+Y 
Sbjct: 487 VSAYRASIAKDRGYLPPKINLGKLYDDQGKYDEALDQLLAAYAIDPKSLEVNNNLGNVYL 546

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           H   E     +K      E    +      +S   +E G  D A A     +K+ P 
Sbjct: 547 H--KELYQDSIKHYKAAIEKKPNATLMRYNLSLAYIETGDQDDAIASLQELIKVDPS 601


>gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 792

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 13/204 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +  +  + G L  A+    + L + P        +            AI F+ Q      
Sbjct: 9   IALQHHQAGRLVEAESLYRQILAVQPGHAETLHLLGALAQQVGRTEMAIEFMRQAIAADP 68

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
               N A  L   +      G    +   A  ++++      A       L    +  +A
Sbjct: 69  ----NHAAALSNLAATLLAGGRAGEAAEYARRAVEVAPGFADAHYNLGAVLAELGQMEEA 124

Query: 280 EVILEKIWKVNPHPEIAN-----IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSK 333
                +  ++ P   +A      I   L   +  +   +RA++L        ++   +  
Sbjct: 125 LASYRRALEIQPTHAVAENNLGNILRELRRLDEAIAAYRRAIQL---QPAYADAHNNLGV 181

Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357
              E G  D+A A    A+++ P 
Sbjct: 182 ALSEQGKSDEAIAAYGRALELKPD 205



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 98/319 (30%), Gaps = 41/319 (12%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A  +  A  ++  +      H E L +LL   +A    +  +A E +   +        A
Sbjct: 16  AGRLVEAESLYRQILAVQPGHAETL-HLLGA-LAQQVGRTEMAIEFMRQAIAADPNHAAA 73

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + +L       G    A  YA +A++++P        +        +   A+    +  +
Sbjct: 74  LSNLAATLLAGGRAGEAAEYARRAVEVAPGFADAHYNLGAVLAELGQMEEALASYRRALE 133

Query: 217 NAK--------------EWNRNRAILLIAR----------------SLENADKGDMIASY 246
                            E  R    +   R                 +  +++G    + 
Sbjct: 134 IQPTHAVAENNLGNILRELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAI 193

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTH 301
                +L+L  +          +L +  +  +A V   +  + +P        +      
Sbjct: 194 AAYGRALELKPDGNAVHANLGNALRASGRYAEAVVAYRRSLQSSPARLDICQGLGEALVL 253

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--E 359
           L   +  G++     +   N +  E+   ++ +      +D A A    A+++ P +   
Sbjct: 254 LGRFDEAGEV--FRLIVRCNPDDPEAWASLANVLQRGEKLDDAIACYRQALRLDPEEPFR 311

Query: 360 IFLLLAQIEQANSHNTDKI 378
           +  L A +++    +    
Sbjct: 312 LCRLAALLQRQRRLDDAAA 330



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 71/260 (27%), Gaps = 11/260 (4%)

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R        +            Y   +  L    +        + +Y        +  
Sbjct: 148 ILRELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAIAAYGRALELKPDGN 207

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            V+        A  +Y  A       LQ    R      L      +G  + A       
Sbjct: 208 AVHANLGNALRASGRYAEAVVAYRRSLQSSPARLDICQGLGEALVLLGRFDEAGEVFRLI 267

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +  +PD P    ++       ++   AI    Q  +   E        L   +     + 
Sbjct: 268 VRCNPDDPEAWASLANVLQRGEKLDDAIACYRQALRLDPEEPFR----LCRLAALLQRQR 323

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEI 295
            +  +    ++ L+L  N   A    A+    Q +   A  ++ ++  + P     H ++
Sbjct: 324 RLDDAAAALLQVLELQPNQTEALYRLAEIYKDQGRSELALELMRRLHGLAPEVPRIHSDL 383

Query: 296 ANIYTHLLSENTVGKLKRAL 315
             +   L S     +  RA 
Sbjct: 384 ILMM--LASPEVDERAVRAE 401


>gi|167719468|ref|ZP_02402704.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
           DM98]
          Length = 965

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 288 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 340

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 341 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 400

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 401 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 460

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 461 LERRDDAIAA--LQRALE 476



 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154
           H+  LA +      Q     ++    LL  ++AL    ++ A  + E + +         
Sbjct: 394 HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 451

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +        R  D  +A +   +AL+++   P      VQ Y+  +++ +A+     +
Sbjct: 452 ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 506

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +          A  +      N    D   +      +L++  ++  A       L   +
Sbjct: 507 RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 564

Query: 275 KKRKAEVILEKI 286
           +  ++E +L + 
Sbjct: 565 RLAESEEVLRRA 576



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            ++A+ Y  +A+ + PD               ++   A    +  +  A + + +   L 
Sbjct: 331 PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 386

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +AR        D   +   A  +++L  +   A +  A+  +      +A    E+    
Sbjct: 387 LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 441

Query: 290 NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
              P+    Y +L          ++ +  L+RAL L   +  ++ + V   +  L     
Sbjct: 442 EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 498

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           D+A   A   +           +  +   N    D+     + AL   P
Sbjct: 499 DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 547


>gi|78045755|ref|YP_361930.1| putative porphyrin biosynthesis protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034185|emb|CAJ21830.1| putative porphyrin biosynthesis protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 421

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 107/361 (29%), Gaps = 31/361 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   Y  +    L IL   L    LL+
Sbjct: 7   VLILLIAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K   +KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYFE----SCRIGDLNS 172
            L     V++A A      A    + + +   T          L  +    +    D  +
Sbjct: 120 ALAS--AVRVADARGDEAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINALDSAN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +   A                   A   L   ++ A       + L    
Sbjct: 178 AQPLPARGLLLRTRA----------LAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATL 227

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291
           + +   +     +  +  E+L     +  A + A A+     +    A   LE+      
Sbjct: 228 AEQTLLQASDANALAERWEALPKTLRTTPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQW 287

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +Y  L  E    +   A R      +S   L+ ++++A       QA      A
Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347

Query: 352 M 352
           +
Sbjct: 348 I 348


>gi|332140114|ref|YP_004425852.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550136|gb|AEA96854.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 924

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                 + A E  E +L         + +L + +    DL  A+  A KA+ +  +    
Sbjct: 787 QIRNDRDSAIETYEQVLTQTPDNFVVLNNLAYLAFEDNDLARAETLAKKAVSLQRENADA 846

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN---ADKGDMIASYH 247
            + + Q ++   E   A+  L ++       N    +  +A  LE    A     +AS  
Sbjct: 847 VDTLAQIHIAKGEKEAALA-LYEQISAGPIANDEVYLNHVALLLELDKDALAKRRLASRE 905

Query: 248 DAIESLK 254
              E+ K
Sbjct: 906 FTTEAAK 912



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 60/159 (37%), Gaps = 7/159 (4%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A++ +P++      +++ Y+   +  +A        K+  E +   A  LI       
Sbjct: 429 EEAVEKAPESVTSQATLLRAYIATNQLDKA----KTAAKDWHEQSPETAAPLIYLGNIAT 484

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEI 295
            +G    +     ++ +L D     +   AK L+++ KK  A   +      NP     +
Sbjct: 485 AEGAYQDAAQYLDKASELSDAGNEVTYSRAKLLVAEGKKDNAMAFIRAFVDKNPADVQAL 544

Query: 296 ANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A  +   +   N    +  A      NK+ +   +++++
Sbjct: 545 ALWFALAVEKGNGDEVIAHAQTQFNGNKDQLNLRLLLAR 583


>gi|307354733|ref|YP_003895784.1| tetratricopeptide repeat-containing protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307157966|gb|ADN37346.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 1070

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 80/272 (29%), Gaps = 36/272 (13%)

Query: 106 MHSYVSQQHTFHNEYLV---YLLEVQIA----LAERQYNIAHEKLEM-MLQIPATR---- 153
           +  Y   +             +L  Q           Y  A +  +  +   P+ +    
Sbjct: 61  LSKYQDAERYLKRAVAASPENILAWQALGNSLYESGDYQGALQCFDAILKADPSIKDILN 120

Query: 154 ----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAI 208
                  +   Y ++       +  +     L+I P    + E       +   +W RA+
Sbjct: 121 KKVDLLELQGNYEQA-----AETCLKL----LEIEPANIRIKE-RFGILCMRGSDWGRAL 170

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              +    +A + N    +      LE    G    +      +LK   + I A    A 
Sbjct: 171 EAFS-GVISADQANTRSMV-YTGEILEII--GKNEEALEIYETALKHDPSCIPALYNRAY 226

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKES 324
            L    +  +A     +I   NP+ ++   +        +            + +   + 
Sbjct: 227 LLEKVGRYSEAAEAFREINTNNPN-DLIAAFRRATDLFWTGAYGECAHTIEMILKKTPDD 285

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +++  ++      +G  ++A A     +K AP
Sbjct: 286 IKAWQMMGVALELLGEYERAVACYDNVLKAAP 317



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 86/294 (29%), Gaps = 49/294 (16%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
               +I  + + +  +   H    +  + L+         ++  A    E  ++      
Sbjct: 600 ANIGDIEGSAREYEEIIGAH--PEQSGLALILGHELEILGRHEEAAAAFEHFVRANREDA 657

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLA-KEWSRAITFL 211
                      +IG+   A +   KA    P        +A++   +   K+ +     L
Sbjct: 658 GGWREFGRSLGKIGEYVKAAKSFEKAAAFRPEDKGILFDQAMLLLEIGEYKQSADIFDAL 717

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                      R RA  L      +A K      +  A ES                   
Sbjct: 718 RGNDPENPAVRRGRAFALAGAKKYSAAKEAFEEYFEKAKES------------------- 758

Query: 272 SQNKKRKA-EVILEKIWKVNPHPEIANI-YTHLLSENTVG-----KLKRALRLEEINKES 324
           S N+ RKA   + EK        ++A   Y  +L EN        +L   LR     ++ 
Sbjct: 759 SDNEARKALAEVCEKTGDF----DLAAGNYAAVLEENKEDIDTWLRLTNLLRYMSRYEDV 814

Query: 325 VESLVIVSKIA--------------LEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +E+   +++                  +G  +QA       +++     +  ++
Sbjct: 815 IEATDNIAEFEPENIPALKIRGDVLYRLGRYEQASETFQKVLELDDSNRLCRMM 868


>gi|226486964|emb|CAX75347.1| O-glycosyltransferase [Schistosoma japonicum]
          Length = 1045

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+       N  +V+     +   +   ++A +  +  +++      A  +L   
Sbjct: 235 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 294

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G ++ A+ Y   AL + P        +        +   AI    +  +   E+  
Sbjct: 295 LKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 352

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+     +     +G +  +     E++++      A      +L      + A    
Sbjct: 353 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 410

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           ++  ++NP     H  +A+I     S N    +       ++     ++   ++
Sbjct: 411 QRAIQINPAFADAHSNLASILKD--SGNLSEAITSYKTALKLKPNFPDAFCNLA 462



 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 11/206 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + + + A E     L++  T   ++ +L       G    A R   +AL+I P+
Sbjct: 292 ANALKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPE 351

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +     L  +   A+    +  + +  +    A           +  D+  + 
Sbjct: 352 FAVAHSNLASMLQLQGKLQEALLHYREAIRISPTF----ADAYSNMGNTLKELQDVQGAM 407

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301
                ++++      A    A  L       +A    +   K+ P+ P+    +A+    
Sbjct: 408 QCYQRAIQINPAFADAHSNLASILKDSGNLSEAITSYKTALKLKPNFPDAFCNLAH-CLQ 466

Query: 302 LLSENTVGKLKRALRLEEINKESVES 327
           ++ + +     R  +L  + ++ +ES
Sbjct: 467 IVCDWS-DYKHRMKKLVSMVQDQLES 491


>gi|119897287|ref|YP_932500.1| HemY protein [Azoarcus sp. BH72]
 gi|119669700|emb|CAL93613.1| HemY protein [Azoarcus sp. BH72]
          Length = 399

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 117/384 (30%), Gaps = 52/384 (13%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +   I        +++   +   +        + S  +++ +L     A  L+  
Sbjct: 1   MRALFWLIGIFATAVGLAMLARLNDGYVLVVLPPWRVQLSLNLLVVLLLLGFAAGYLVLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112
           +    L  PA +     +R  +K  +AL   L ++       A K  S            
Sbjct: 61  LVGRTLELPARVSSWRERRRREKAGRALREALRALFEGRFAQAVKHASGAFASGESPAMA 120

Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
                   H   ++    +     A        A    E  L +   R            
Sbjct: 121 ALVAARAAHAMRDDTRYRIWIGHAADQGEDARAARLMTEAELAVEGRRF----------- 169

Query: 166 RIGDLNSAQRYATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
                 +A+R   + L +S           ++     ++W   +    Q  K+    +  
Sbjct: 170 ----EEAAERL--EMLRLSGHRHIAALRLSLRVASALQQWDEVLRLTRQLYKHKALSDEQ 223

Query: 225 RAILL-IARSLENADKGDMIASYHDA--------IESLKLCDNSIMASICAAKSLISQNK 275
            A LL  A +    + G   A+  D         +   +  + ++     A +  +++  
Sbjct: 224 AAPLLRRAHAERLKELGGDAAALADYWNGIPADELRDRRFVERAVPMLSAAGRGALAR-- 281

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSK 333
            R  E +L++ W       +A +Y H      + V  L R     + +      L  + +
Sbjct: 282 -RTLERLLDEEWDSG----LARLYAHCGDGEGDAVACLARGEAWLKKHPRDAGLLFALGR 336

Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357
           + L      +A +    ++ +AP 
Sbjct: 337 LCLAAQLWGKAQSYLEASLNLAPT 360


>gi|291566886|dbj|BAI89158.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 294

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 16/176 (9%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L+S     +    +    ++Q H         +L  Q          A +    +L+   
Sbjct: 89  LISQGQGQVRDVVEPLQRLAQLH--PETPEYGILLAQAQEYTGDPEAAAQSYRRILEQRP 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLA 201
               A+  L           +A       L  +P         +            Y   
Sbjct: 147 GEVQALQGLVSLLISQDRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQ 206

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           + +  AI   ++  KN++   R     ++A+++    +G+   +     E++ L  
Sbjct: 207 QRYQEAIAVYDEAIKNSESDFRP----VLAKAIILRQQGNPDDAELLFAEAIDLAP 258


>gi|226486968|emb|CAX75349.1| O-glycosyltransferase [Schistosoma japonicum]
          Length = 1045

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+       N  +V+     +   +   ++A +  +  +++      A  +L   
Sbjct: 235 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 294

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G ++ A+ Y   AL + P        +        +   AI    +  +   E+  
Sbjct: 295 LKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 352

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+     +     +G +  +     E++++      A      +L      + A    
Sbjct: 353 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 410

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           ++  ++NP     H  +A+I     S N    +       ++     ++   ++
Sbjct: 411 QRAIQINPAFADAHSNLASILKD--SGNLSEAITSYKTALKLKPNFPDAFCNLA 462



 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 11/206 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + + + A E     L++  T   ++ +L       G    A R   +AL+I P+
Sbjct: 292 ANALKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPE 351

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +     L  +   A+    +  + +  +    A           +  D+  + 
Sbjct: 352 FAVAHSNLASMLQLQGKLQEALLHYREAIRISPTF----ADAYSNMGNTLKELQDVQGAM 407

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301
                ++++      A    A  L       +A    +   K+ P+ P+    +A+    
Sbjct: 408 QCYQRAIQINPAFADAHSNLASILKDSGNLSEAITSYKTALKLKPNFPDAFCNLAH-CLQ 466

Query: 302 LLSENTVGKLKRALRLEEINKESVES 327
           ++ + +     R  +L  + ++ +ES
Sbjct: 467 IVCDWS-DYKHRMKKLVSMVQDQLES 491


>gi|148262768|ref|YP_001229474.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146396268|gb|ABQ24901.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 632

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 4/178 (2%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
               +  L++    ++ +  + Y  A  +     ++      A   L     +      A
Sbjct: 400 KLRKDNPLIHFKLAKVYVNSKDYPAAISEYLETTKLDPDNIEAHRDLAALFRKKNQNEEA 459

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           ++     L +  D      A+   YV  K +   I  L    K   E N           
Sbjct: 460 EKEYRSILRMKKDDVEARTALTSIYVKNKNYDELINLL----KEGVELNPKDPNSHYKLG 515

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           L    K D  A+     ES+ L  +   A     ++ +   +  +A+  LE   K +P
Sbjct: 516 LIYEFKKDYDAAISQYKESVALKSDHAKALNAMGRAYMKSGRISEAKEALETAKKADP 573



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 44/306 (14%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL ++ +      + +      Q        ++ L  +    +     +  +  ++  IP
Sbjct: 204 GLAALFSSRNQFDKAIGELKKAQVIDPGNKNIHRLLAEAYDKKGDKKSSEYEY-ILAGIP 262

Query: 151 -ATREFAVYSLYF---ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             T E A  +      E  +  +   A      AL   P+ P   + +    + A     
Sbjct: 263 VKTEEVAQSNHLRQGDEFVKNKEYEKAATEYKAALKDKPEWPEALQKLGDAQMAAGHDDE 322

Query: 207 AITFLNQKKKNAKE-----------WNRN----RAILLIARSLEN-ADKGDMI------- 243
           AI    +  +   E           + R      A++   ++L   AD GD         
Sbjct: 323 AIASYREAIRLKAENGNLHYNLGILYERKALLDEAVVEYRQALNYTADNGDTRRRLADIY 382

Query: 244 -------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNP---- 291
                   +     E +KL  ++ +     AK  ++      A    LE   K++P    
Sbjct: 383 TLRGSFPQAIEQYRELIKLRKDNPLIHFKLAKVYVNSKDYPAAISEYLETT-KLDPDNIE 441

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            H ++A ++            K    +  + K+ VE+   ++ I ++  + D+       
Sbjct: 442 AHRDLAALFRKKNQNEEAE--KEYRSILRMKKDDVEARTALTSIYVKNKNYDELINLLKE 499

Query: 351 AMKIAP 356
            +++ P
Sbjct: 500 GVELNP 505


>gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413]
 gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 311

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 58/198 (29%), Gaps = 18/198 (9%)

Query: 88  LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           L  GL +I A    +   A +    +       +  L   L  Q    +     A     
Sbjct: 49  LNQGLQAIQAGRIQDAIAAFQSAIQLDPNLAAAHYNLGLALR-QTGQLQ---PAADAFYR 104

Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                P        +     E     +L  A  Y  +AL++ P   +    +       +
Sbjct: 105 ATQSDPNFALAFANLGGSLLE---GNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQ 161

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            W  AI    +  + +K        L L    L   D+     + +   +++K+      
Sbjct: 162 NWEGAIASFQKAVELSKNAPEPHYYLGLCYLQLGKLDE-----AKNAFNQAIKINPRYSE 216

Query: 262 ASICAAKSLISQNKKRKA 279
           A       L +Q   ++A
Sbjct: 217 AHYNLGVILFNQGNSQEA 234



 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 22/171 (12%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS---------------LENADKGDMIASYHDAIE 251
           A T LNQ  +  +      AI     +               L     G +  +      
Sbjct: 45  APTLLNQGLQAIQAGRIQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYR 104

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
           + +   N  +A      SL+  N  ++A   L++  ++ P     H  +  +      +N
Sbjct: 105 ATQSDPNFALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLV--RQQQQN 162

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             G +    +  E++K + E    +    L++G +D+A      A+KI PR
Sbjct: 163 WEGAIASFQKAVELSKNAPEPHYYLGLCYLQLGKLDEAKNAFNQAIKINPR 213


>gi|253998598|ref|YP_003050661.1| hypothetical protein Msip34_0886 [Methylovorus sp. SIP3-4]
 gi|253985277|gb|ACT50134.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 463

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 17/170 (10%)

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W  +A+   Y+  + W  A   L Q  +   ++    A  L         +G   A+  
Sbjct: 19  AWFAQAL--AYMRIQHWQEAEQALRQALEIDPDY----AEALCNLGYVLEQRGYPDAAEE 72

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYT 300
               S+ L  + + A++     L SQ++  + E I ++   +  HP+       +  +YT
Sbjct: 73  AYRRSMALAPSLLNAALNLGVMLQSQSRFDEVEAIYQQT--IRQHPDQPAPWTNLGILYT 130

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +  ++   +  R   L  +N +  ++   +S + L  G  ++  A    
Sbjct: 131 AMQRDHEAERCHR-QALM-LNPDYRKARFNLSYLLLRQGRFEEGWACIEA 178


>gi|283785422|ref|YP_003365287.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168]
 gi|282948876|emb|CBG88478.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168]
          Length = 389

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 57/282 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL VQ      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       R+G                       + ++Q Y    +W +AI    +
Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSDWQKAIEVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  KE  R   A      +L+     D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKEKQRVEIAHFYCELALQQMAGDDLDRAMTLLKKGAAADKNSARVSIMMGRVWMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKE 323
           +    KA   L+++  ++   E+ +    +          +E  V  L+RA    E N  
Sbjct: 227 KGDYAKAVESLQRV--ISQDKELVSETLEMLQTCYQQLGKNEEWVEFLRRA---VEENTG 281

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           +  + ++++ I       D A       ++  P   +F  L+
Sbjct: 282 AA-AELMLADILEAREGHDTAQVYITRQLQRHPTMRVFHKLM 322


>gi|302878377|ref|YP_003846941.1| tetratricopeptide TPR_2 repeat protein [Gallionella
           capsiferriformans ES-2]
 gi|302581166|gb|ADL55177.1| tetratricopeptide TPR_2 repeat protein [Gallionella
           capsiferriformans ES-2]
          Length = 391

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 38/188 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNE--YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A +MH  +  +    ++          Q  L     + A      + +       
Sbjct: 84  GEVDRALRMHHNLVDRADLDDDKRQQAVFELAQDYLKAGILDRAERLFGELKKT------ 137

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-K 214
                               YA  AL+           +++ +    +W +AIT   Q  
Sbjct: 138 -------------------SYAKPALE----------FLLELFQKEHDWLKAITAAQQLS 168

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +   +++  A      + +    G++ A+      +L++C  S+ A+I     + ++ 
Sbjct: 169 VVSGTSYSKLSAFFYCELANDEITAGNLTAARDHLRLALEVCPVSVRATIMLGDMVSAEG 228

Query: 275 KKRKAEVI 282
              +A  I
Sbjct: 229 HVEQAIAI 236


>gi|113476025|ref|YP_722086.1| hypothetical protein Tery_2395 [Trichodesmium erythraeum IMS101]
 gi|110167073|gb|ABG51613.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 300

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 49/146 (33%), Gaps = 16/146 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +L  Q          A +    +L I      A+  L           +A       L 
Sbjct: 127 NVLLAQAKAYTGDREGAAQIYRSLLAIKPGDIKALQGLVSLLLEQERPEAAIGLLQDTLK 186

Query: 183 ISP--DAPWV--------TEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIA 231
            +P  +               + Q Y   K +  AI   ++  K ++K++       ++A
Sbjct: 187 AAPVKNQVEAGSIDIVSVQLILGQVYAQQKRYEEAIAVYDEAIKLSSKDFRP-----ILA 241

Query: 232 RSLENADKGDMIASYHDAIESLKLCD 257
           +++   ++G+  AS     +++++  
Sbjct: 242 KAIILQEQGNTEASQELFNKAIEIAP 267


>gi|320334271|ref|YP_004170982.1| tetratricopeptide repeat-containing protein [Deinococcus
           maricopensis DSM 21211]
 gi|319755560|gb|ADV67317.1| Tetratricopeptide TPR_1 repeat-containing protein [Deinococcus
           maricopensis DSM 21211]
          Length = 496

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 93/326 (28%), Gaps = 50/326 (15%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIP------------------------------- 150
             L   Q AL E +Y  A    E ++                                  
Sbjct: 41  ADLSAAQRALQEGRYRDAQTAFEALIARDYNNAEAHFGLGLTLYALGDLTGARFEFTQLT 100

Query: 151 ---ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLA 201
                R    Y+L   + R G  + A     KAL ++           V +A+  +    
Sbjct: 101 ALAPDRFEGFYNLGVLAARQGQYDEALANYQKALTLAQGKASPTSVRQVLDALAGEQTRR 160

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            ++   IT L      A     N A L +  +      G+   +       L+    +  
Sbjct: 161 GDYPGLITTLTATLALAP----NDAALQLRLADAQYRAGNGTQALPALYALLQANPANAD 216

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHP------EIANIYTHLLSENTVGKLKRAL 315
           A+   A    +QN   +A   L+K     P+        +           T   +    
Sbjct: 217 AAQLLADVYTAQNLPDRAIRELDKAVAATPNGTVQARLLLRKADLLARQNRTRDAVLAVQ 276

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
              + +  +  +   + ++ L       A      A ++ P+   +     + + N    
Sbjct: 277 DAVKADSRNAAAQARLGELLLARNDRTGARTAYQNAARLDPQNASYRASLALVELNLAQY 336

Query: 376 DKILYWTQSALHAMPDPLWISDDGYL 401
           D      Q A+ A PD L ++   ++
Sbjct: 337 DAARRDAQLAVQAAPDQLTLARAQFV 362



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 89/314 (28%), Gaps = 46/314 (14%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L     ++       A+     +  +   + E    L       A      A  +   + 
Sbjct: 43  LSAAQRALQEGRYRDAQTAFEALIARDYNNAEAHFGL--GLTLYALGDLTGARFEFTQLT 100

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLA 201
            +   R    Y+L   + R G  + A     KAL ++           V +A+  +    
Sbjct: 101 ALAPDRFEGFYNLGVLAARQGQYDEALANYQKALTLAQGKASPTSVRQVLDALAGEQTRR 160

Query: 202 KEWSR------------------AITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-- 241
            ++                     +   + + +         A+  + ++          
Sbjct: 161 GDYPGLITTLTATLALAPNDAALQLRLADAQYRAGNGTQALPALYALLQANPANADAAQL 220

Query: 242 ----------MIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKIWK 288
                        +  +  +++    N  + +      A  L  QN+ R A + ++   K
Sbjct: 221 LADVYTAQNLPDRAIRELDKAVAATPNGTVQARLLLRKADLLARQNRTRDAVLAVQDAVK 280

Query: 289 VNPHPEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +     A           ++ T  +         ++ ++      ++ + L +   D A
Sbjct: 281 ADSRNAAAQARLGELLLARNDRTGARTA-YQNAARLDPQNASYRASLALVELNLAQYDAA 339

Query: 345 HAKAMLAMKIAPRK 358
              A LA++ AP +
Sbjct: 340 RRDAQLAVQAAPDQ 353


>gi|320013204|gb|ADW08052.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 1261

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 90/306 (29%), Gaps = 31/306 (10%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY-----LVYLLE-------- 126
             D+  +AL     +I AHN   A        +     NE      L   LE        
Sbjct: 554 RSDQDEEALTEFDRAI-AHNARNALAWARRGEEHRLLGNEDQAVADLTAALELEPTNAWA 612

Query: 127 ----VQIALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRYATKA 180
                +      +   A   L   L++  T               + G  + A    T A
Sbjct: 613 LGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARG--DTHRQAGRYDEAVTDYTAA 670

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L++ P   W   A  + +  A  +  A+T      +    +    A  L AR   +   G
Sbjct: 671 LELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTY----ATALGARGQAHQQAG 726

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +  D   +L+L      A      +     +  +A   L    +++P    A +  
Sbjct: 727 RHEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYA-AALGA 785

Query: 301 HLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +    G+    +       E++     +L    +   + G  D+A       +++ P
Sbjct: 786 RGDTHRQAGRYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDP 845

Query: 357 RKEIFL 362
                L
Sbjct: 846 TYAAAL 851



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 19/234 (8%)

Query: 133  ERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
              +Y+ A       L++  T               + G  + A    T AL++ P   W 
Sbjct: 861  ASRYDEAVTDYTAALELDPTYATALGSRG--DAHRQAGRYDEAVTDLTAALELDPTNAWA 918

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +  Q +  A  +  A+T L        E +      L AR   +   G    +  D  
Sbjct: 919  IGSRGQAHQQAGRYDEAVTDLTAAL----ELDPTLTWALGARGETHQQAGRYEQAVADYT 974

Query: 251  ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
             +L+L   +  A     ++     +  +A   L    +++P       +       T  +
Sbjct: 975  AALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPT----LTWALGARGETHQQ 1030

Query: 311  LKRALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              R  +          ++     +L    +   + G  +QA      A+++ P 
Sbjct: 1031 AGRYEQAVADYTAALELDPTDDWALAQRGETHRQAGRYEQAITDYTAALELDPT 1084


>gi|257457415|ref|ZP_05622585.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
 gi|257445144|gb|EEV20217.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
          Length = 580

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 90/263 (34%), Gaps = 27/263 (10%)

Query: 131 LAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             + + + A      M   Q  +     +  L + + R  + + A   A K     P+A 
Sbjct: 200 EQQGRLSDAEASYR-MAWGQDESCYPAGMR-LAYLALRNNNNDIAYEIAEKLYSRYPNAA 257

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIAS 245
            +   + + Y+   +  +A   +    K   ++ R    R  L     +   +     A 
Sbjct: 258 AIQLLLAETYLEKGDLEKAEEIVYALLKTGNDFGRPFFLRVRLH----IVKKEYLTANAL 313

Query: 246 YHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIWKVNP-HPEIANIYTH-- 301
             +  +  ++  + +   +   + L+       +A+  LEK   + P   E+     +  
Sbjct: 314 LDEFAKQNRVDKDYL---LLRGRVLLEWSKNVTEAKQCLEKAVTLYPGDSEVMLACANFC 370

Query: 302 ------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                 +  +NT   +     L + N  ++ ++ ++ K  +     + A  +A       
Sbjct: 371 FETKNTVNGKNTNDFI---ETLLKQNPRNILAIRLLVKDDIAEKRWESAFERAQYLYDNN 427

Query: 356 PRKEIFLLLAQIEQANSHNTDKI 378
           P +E  +L A++    ++    +
Sbjct: 428 PSEEDVVLYARVCAGMNNWEAAV 450


>gi|226486966|emb|CAX75348.1| O-glycosyltransferase [Schistosoma japonicum]
          Length = 1063

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+       N  +V+     +   +   ++A +  +  +++      A  +L   
Sbjct: 253 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 312

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G ++ A+ Y   AL + P        +        +   AI    +  +   E+  
Sbjct: 313 LKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 370

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+     +     +G +  +     E++++      A      +L      + A    
Sbjct: 371 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 428

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           ++  ++NP     H  +A+I     S N    +       ++     ++   ++
Sbjct: 429 QRAIQINPAFADAHSNLASILKD--SGNLSEAITSYKTALKLKPNFPDAFCNLA 480



 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 11/206 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + + + A E     L++  T   ++ +L       G    A R   +AL+I P+
Sbjct: 310 ANALKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPE 369

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +     L  +   A+    +  + +  +    A           +  D+  + 
Sbjct: 370 FAVAHSNLASMLQLQGKLQEALLHYREAIRISPTF----ADAYSNMGNTLKELQDVQGAM 425

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301
                ++++      A    A  L       +A    +   K+ P+ P+    +A+    
Sbjct: 426 QCYQRAIQINPAFADAHSNLASILKDSGNLSEAITSYKTALKLKPNFPDAFCNLAH-CLQ 484

Query: 302 LLSENTVGKLKRALRLEEINKESVES 327
           ++ + +     R  +L  + ++ +ES
Sbjct: 485 IVCDWS-DYKHRMKKLVSMVQDQLES 509


>gi|256079484|ref|XP_002576017.1| o-linked n-acetylglucosamine transferase ogt [Schistosoma mansoni]
 gi|238661274|emb|CAZ32252.1| o-linked n-acetylglucosamine transferase, ogt, putative
           [Schistosoma mansoni]
          Length = 1063

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 76/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+       N  +V+     +   +   ++A +  +  +++      A  +L   
Sbjct: 253 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 312

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A+ Y   AL + P        +        +   AI    +  +   E+  
Sbjct: 313 LKEKGKVLEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 370

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+     +     +G +  +     E++++      A      +L      + A    
Sbjct: 371 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 428

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           ++  ++NP     H  +A+I     S N    +       ++     ++   ++
Sbjct: 429 QRAIQINPAFADAHSNLASILKD--SGNLADAITSYKTALKLKPNFPDAFCNLA 480



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +    H + L  L    I   + +   A       L+I      A 
Sbjct: 317 GKVLEAEEYYNTALRLCPTHADSLNNL--ANIKREQGKAEEAIRLYVRALEIYPEFAVAH 374

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L       G L  A  +  +A+ ISP        +       ++   A+    +  + 
Sbjct: 375 SNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCYQRAIQI 434

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +    D G++  +      +LKL  N   A    A  L
Sbjct: 435 NPAF----ADAHSNLASILKDSGNLADAITSYKTALKLKPNFPDAFCNLAHCL 483


>gi|227820344|ref|YP_002824315.1| TonB-dependent receptor [Sinorhizobium fredii NGR234]
 gi|227339343|gb|ACP23562.1| putative exported protein, TonB-dependent receptor protein
           [Sinorhizobium fredii NGR234]
          Length = 1198

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 78/282 (27%), Gaps = 45/282 (15%)

Query: 80  NYDKG-YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
               G Y AL     +    +I  A +      +QH   +  L      Q A        
Sbjct: 334 RQATGAYGALAEAWTAGFRIDIRAAIETIKKAERQH-PDDPSLPAF-RAQFASLLDDRAE 391

Query: 139 AHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             + ++  L I      A+   + Y  +    DL  A     +AL+ +P +P +  A+  
Sbjct: 392 IRDGIKRALTIDPGDPTALEARAHYR-ADIENDLEGALADLQRALETAPGSPTIWNAIGI 450

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A     +  K A E +          +++   +  +  +  +   +L + 
Sbjct: 451 VQGDRGDNRAA----ERAFKKAIELDPADPNYHANLAIQYLGELRVAEAKREIDAALAVD 506

Query: 257 DNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
            +     +  A+           KA   L      NP       +               
Sbjct: 507 PSFD--IVLVARGWYQLQNGDVEKAVEDLLAGSTANP------AFAGA------------ 546

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                         ++++    E G    A      A ++ P
Sbjct: 547 -------------QMLLAAAYYEKGDHGPAAQALDSADRLDP 575


>gi|297617492|ref|YP_003702651.1| hypothetical protein Slip_1319 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145329|gb|ADI02086.1| Tetratricopeptide TPR_4 [Syntrophothermus lipocalidus DSM 12680]
          Length = 722

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 76/244 (31%), Gaps = 36/244 (14%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L    + + +     A +  + ++    T   A   L     R G+   A     + + 
Sbjct: 109 KLSLAGMYMDKGDPVQAEKAYKEIIDEDKTAVEAYQGLAMIYERNGEGEQALAVLEQGIL 168

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADK 239
            +        A+   Y    E  +A+  + Q      N  E  R    +      E  DK
Sbjct: 169 ANQQDYRAHNALASYYARNGEKDKAVESIVQSLALDVNQAEAYRILKDMYSEDWSELIDK 228

Query: 240 ---------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                                G    +     E LK  + +  A++ AA  +     ++K
Sbjct: 229 AGSIEDQGIGNIMRFYALYESGQYQEALSLYEEELKQDEANQKAAVLAAACMFRSGDEQK 288

Query: 279 AEVILEK-------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           A  +++K        W +    +IA  Y  L  +           L   N++++++L IV
Sbjct: 289 AGELVQKIAEKPANEWIMA---DIAGYYL-LTGDKDKALAWAGRSLAA-NEQNLDALKIV 343

Query: 332 SKIA 335
              A
Sbjct: 344 VSAA 347


>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
 gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
          Length = 345

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 3/126 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y  A E  +  ++I         +L      +GD   A +   KAL I   +      
Sbjct: 209 KDYKKAVECYKKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMD 268

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +         +  A+    + ++   +    +A+ L  ++   A KGD   +     ES 
Sbjct: 269 MGIALKELGRYDEALKAYEKAEQINPD---LKALSLYNKACLYASKGDKEKALKLLKESF 325

Query: 254 KLCDNS 259
            +  + 
Sbjct: 326 SIDPSL 331



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 13/202 (6%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRA 226
           GD   A +  TKA++I PD           +    ++  A+   N+    N ++ +    
Sbjct: 107 GDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYN 166

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + ++ R      KGD+  + +   +++++   +                 +KA    +K 
Sbjct: 167 LGIVYR-----IKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYKKA 221

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            ++NP        + N Y  +   +    +K   +  +I+K S E  + +     E+G  
Sbjct: 222 VEINPLFFLGWQNLGNTYLDM--GDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRY 279

Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363
           D+A      A +I P  +   L
Sbjct: 280 DEALKAYEKAEQINPDLKALSL 301


>gi|196234524|ref|ZP_03133347.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
            Ellin428]
 gi|196221404|gb|EDY15951.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
            Ellin428]
          Length = 1765

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 63/310 (20%), Positives = 111/310 (35%), Gaps = 35/310 (11%)

Query: 93   MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA---HEKLEMMLQI 149
            +++ A  +P A++      +    +   +  LL       E++  IA    E +  ++  
Sbjct: 881  VALQAGRLPEAQEFARSALRLSIDYQMSVRDLLAASATFEEKRAAIAFLREELIRQVVFG 940

Query: 150  PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  A  S  FE     DL ++ R A +A    PD      AVV Q V   +   A+T
Sbjct: 941  EG--LLAYRSAAFEVSEPADLLASLRQAHEA---RPDLWHAWSAVVLQLVDMHQLDEALT 995

Query: 210  FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               Q  +      R    L +  +  +  + D  +       +L++      AS   A +
Sbjct: 996  LAQQATERFPLLPR----LWVDLAQVHRARRDRESEIAPLKRALQISPAWGRASQLLADT 1051

Query: 270  LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKE 323
                    +A  ILE+     P     H  +AN+  HL   E  + +L+ AL+L      
Sbjct: 1052 YERMGNYAEAARILEQAIAATPLDATNHGTLANVLHHLGRKEEAIQRLEHALKL------ 1105

Query: 324  SVESLVIVSKIALEMGSIDQAH--AKAMLAMKIAPR-----KEIFLLLAQIEQANSHNTD 376
              E     +  ALE  S  +A    +A +  +            +L+LA++  +      
Sbjct: 1106 --EPNYNFAWDALESWSRGKAANGNRAAVLARELTTLRPGEASSWLVLARV--SVGAPLA 1161

Query: 377  KILYWTQSAL 386
            + L     AL
Sbjct: 1162 ERLDALDRAL 1171



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 10/248 (4%)

Query: 125  LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            L          Y  A   LE  +           +L      +G    A +    AL + 
Sbjct: 1047 LLADTYERMGNYAEAARILEQAIAATPLDATNHGTLANVLHHLGRKEEAIQRLEHALKLE 1106

Query: 185  PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
            P+  +  +A ++ +   K  +     +  ++          + L++AR       G  +A
Sbjct: 1107 PNYNFAWDA-LESWSRGKAANGNRAAVLARELTTLRPGEASSWLVLAR----VSVGAPLA 1161

Query: 245  SYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW--KVNPHPEIA-NIYT 300
               DA++ +L L      A       L    +  +A           V P P      + 
Sbjct: 1162 ERLDALDRALALDPRLADAHDLRVTLLTGARRFDEAIAACSPTVFGGVIPTPLRGRAAWV 1221

Query: 301  HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                  T   + +  ++ E +        ++++      +  +A   A    ++APR  I
Sbjct: 1222 DAQQGRTRAAIAQMRQVVEASPNYYWGWNMLAEWYCADNNFTEAQEAARKMARLAPRSAI 1281

Query: 361  -FLLLAQI 367
                LA I
Sbjct: 1282 PLGYLADI 1289


>gi|146283511|ref|YP_001173664.1| TPR domain-containing protein [Pseudomonas stutzeri A1501]
 gi|145571716|gb|ABP80822.1| TPR domain protein [Pseudomonas stutzeri A1501]
          Length = 594

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 87/284 (30%), Gaps = 39/284 (13%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
             S  ++  +F  + L  LL  ++A    +++IA                A    +  + 
Sbjct: 57  AASDAAEYGSFSRQSLYALLVAELAGQRNRFDIALGNYVQQAHATQDAGVAERG-FRIAE 115

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            +G   +A   A      +P++     A   Q   A  +  ++ F+ +  +   +     
Sbjct: 116 YLGADQAALDTALIWARNAPESLDAQRAAAVQLARAGRYEESLEFMEKVLQGQGD-THFD 174

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNS-------------------------- 259
            + L A   +   +  ++ S+   +                                   
Sbjct: 175 FLALSASETDPDTRAGLLQSFDKLLLKHPNNPQLSFGKAVLLQQDDRSEEALALLQEQPN 234

Query: 260 ----IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHL--LSENTVGK 310
               I + +  A+ L S  +  +A  +LEK   +  HPE   +   Y  L    E     
Sbjct: 235 KQRQIPSILLEARLLHSLQRSDQALPLLEK--SLRQHPEDKRLRLTYARLLVEQERLEDA 292

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +     L + +    +    ++ + +E  +  +A       ++ 
Sbjct: 293 MGEFATLVQQHPADDDLRFSMALVCMEAEAWREATVYLEELIER 336


>gi|145634448|ref|ZP_01790158.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae
           PittAA]
 gi|145268428|gb|EDK08422.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae
           PittAA]
          Length = 396

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%)

Query: 98  HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     +TF  + L      +  +    ++ A     +++  P     
Sbjct: 91  GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                               +A  AL          + ++  Y   KEW +A+    +  
Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   + N            ++ +    +       ++L +    + AS+  A   +   +
Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236

Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327
            ++A  ILE + + NP        P + + Y  L   +     L RA ++      + E 
Sbjct: 237 YQQAVEILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373
            + + K+  E      A AK    +   P   IF   +  QI+ A   
Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKNPSTLIFHRFMQYQIDDAEDG 339


>gi|67458702|ref|YP_246326.1| TPR repeat-containing protein [Rickettsia felis URRWXCal2]
 gi|67004235|gb|AAY61161.1| Tetratricopeptide repeat domain containing protein [Rickettsia
           felis URRWXCal2]
          Length = 706

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 78/207 (37%), Gaps = 27/207 (13%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNAKE- 220
                  +A +Y  K L+  P            ++Q    +    A+  L+   K   + 
Sbjct: 19  LEEEKYETAIKYFDKVLNQDPFLSSAYSNKAFALKQLCRIE---EALEVLDTAIKINPKI 75

Query: 221 --WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             +  NR I+L    L          +     ++LKL    ++  I    +L +  K RK
Sbjct: 76  SGYYDNRGIVLSILGL-------YEEAIKSYDQALKLDSLDVLTFINKGWTLNNWGKYRK 128

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-------EINKESVESLVIV 331
           A  +L+K  +++P  +I   Y +     ++ KL +   +        EIN    E     
Sbjct: 129 ALSVLDKAIELDPT-DI-KAYAN--KAISLEKLGKFDEMVHMYNKALEINPNYSELYFDR 184

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +K  +++G  ++A      A++I P +
Sbjct: 185 AKALIDIGEKEKALIDINKAIEINPNE 211


>gi|300940851|ref|ZP_07155381.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
 gi|300454409|gb|EFK17902.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
          Length = 944

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATNNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K    +  +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATNNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738


>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus sp. SIP3-4]
 gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 927

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 14/205 (6%)

Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L   +    + G+L  AQ Y ++ L+ SP+ P     +   Y+ +++++R I  + +   
Sbjct: 8   LMQRAVACHQTGNLMEAQNYYSQVLEESPENPDALHLLGVTYMQSRDYARCIPVIQKAL- 66

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E+N   A       +          +    ++++ L  +   A      S  +  + 
Sbjct: 67  ---EYNPRHADAHYNLGIAFGAVRQYPQAIASYMQAIALKPDRAEAYYNLGVSHAALGQL 123

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331
             A    ++  ++N  P     Y +L                   L +   +  E+   +
Sbjct: 124 EPATASYKEAIRLN--PAYIKAYRNLGVVLEAQGKHTEATAAYQSLLKFRPDDAEAHHQL 181

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356
           +         D+A      A++I P
Sbjct: 182 AINFSTQKKFDEAIIHYSRAIEINP 206



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 37/188 (19%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILL 229
             A  +  KAL+I PD      ++   Y     ++ AI    +       +      + +
Sbjct: 294 EEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALMPNYAEAICNLGI 353

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +    +    +     AI      DN I A +  A++     +  +A          
Sbjct: 354 TLCATLEVEAAIPLLKQSLAI----YADNLI-AHVHLAETYAVLGRFEEAA--------- 399

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            PH E A                   +L E N + +     ++ I ++ G  D A     
Sbjct: 400 -PHYEYAL------------------KLSEKNPQLIN---ALANIYVKTGQHDLAKEYFE 437

Query: 350 LAMKIAPR 357
            A++I PR
Sbjct: 438 RALEIDPR 445



 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 99/305 (32%), Gaps = 66/305 (21%)

Query: 69  PAMLFHMLH----KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYL 121
           P  +   +     K +  + Y  L  G+   A   +  A   +    +    +      L
Sbjct: 90  PQAIASYMQAIALKPDRAEAYYNL--GVSHAALGQLEPATASYKEAIRLNPAYIKAYRNL 147

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             +LE Q      ++  A    + +L+       A + L          + A  + ++A+
Sbjct: 148 GVVLEAQ-----GKHTEATAAYQSLLKFRPDDAEAHHQLAINFSTQKKFDEAIIHYSRAI 202

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           +I+P+        V  Y      ++AI          K      AIL+   ++E      
Sbjct: 203 EINPE-------FVDAYC-----NKAIAL-------GKLNKLEDAILMYKAAIELVPDEA 243

Query: 242 MI-----------ASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            I             + +A+     +++L    + A   A  +LI   +  +A    +K 
Sbjct: 244 SIYNNLGNIFSRKRQFEEALSCFENAIRLQPTYLKAHCNAGNALIDLERVEEAIHHYKKA 303

Query: 287 WKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLV---------IV 331
            +++P     H  +   Y+ L      +   +RA+ L        E++          + 
Sbjct: 304 LEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALM---PNYAEAICNLGITLCATLE 360

Query: 332 SKIAL 336
            + A+
Sbjct: 361 VEAAI 365



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 78/271 (28%), Gaps = 24/271 (8%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
            P A   +           E    L     AL   Q   A    +  +++      A  +
Sbjct: 89  YPQAIASYMQAIALKPDRAEAYYNLGVSHAAL--GQLEPATASYKEAIRLNPAYIKAYRN 146

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G    A       L   PD       +   +   K++  AI   ++  +   
Sbjct: 147 LGVVLEAQGKHTEATAAYQSLLKFRPDDAEAHHQLAINFSTQKKFDEAIIHYSRAIEINP 206

Query: 220 EWNRNRAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           E+    A    A +L   +K  D I  Y  AIE   L  +              + +  +
Sbjct: 207 EF--VDAYCNKAIALGKLNKLEDAILMYKAAIE---LVPDEASIYNNLGNIFSRKRQFEE 261

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A    E   ++ P     H    N    L  E     +    +  EI+ +  E+   +  
Sbjct: 262 ALSCFENAIRLQPTYLKAHCNAGNALIDL--ERVEEAIHHYKKALEIHPDHAEAHNSLGI 319

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
              ++   ++A         IA  +    L+
Sbjct: 320 AYSKLSRYNEA---------IASYQRAIALM 341


>gi|268316984|ref|YP_003290703.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334518|gb|ACY48315.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 1138

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 1/128 (0%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            E +        AL   +   A   LE + ++      A  +L   + R  DL +A+RY 
Sbjct: 36  QETVTAFYTGLAALQAGEDRGARTLLERVTELAPGEPAAWANLGLLALRRNDLEAARRYL 95

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A  ++P++  +   + +  +  ++   A   L    ++    +   A LL      + 
Sbjct: 96  GEAARLAPESARIQVLLARLALAEEQPDAARRHLLAALQH-DPADLEAAYLLFQLLEAHP 154

Query: 238 DKGDMIAS 245
             GD + +
Sbjct: 155 TPGDTLTA 162



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 1/93 (1%)

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RK 358
             L +    G      R+ E+      +   +  +AL    ++ A      A ++AP   
Sbjct: 47  AALQAGEDRGARTLLERVTELAPGEPAAWANLGLLALRRNDLEAARRYLGEAARLAPESA 106

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            I +LLA++  A         +   +  H   D
Sbjct: 107 RIQVLLARLALAEEQPDAARRHLLAALQHDPAD 139



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 6/131 (4%)

Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPEIAN--IYTHLLSENTVGKLKRALRLEEINKESV 325
           + +   + R A  +LE++ ++ P  P          L   +     +       +  ES 
Sbjct: 47  AALQAGEDRGARTLLERVTELAPGEPAAWANLGLLALRRNDLEAARRYLGEAARLAPESA 106

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANS-HNTDKILYWT 382
              V+++++AL     D A    + A++  P   +  +LL   +E   +  +T       
Sbjct: 107 RIQVLLARLALAEEQPDAARRHLLAALQHDPADLEAAYLLFQLLEAHPTPGDTLTADTLL 166

Query: 383 QSALHAMPDPL 393
              L    D  
Sbjct: 167 ARMLRHRSDNQ 177



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 52/171 (30%), Gaps = 19/171 (11%)

Query: 200 LAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            A E   A T L +  +    +              L    + D+ A+     E+ +L  
Sbjct: 50  QAGEDRGARTLLERVTELAPGEPA------AWANLGLLALRRNDLEAARRYLGEAARLAP 103

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-------THLLSENTVGK 310
            S    +  A+  +++ +   A   L    + +P  ++   Y        H    +T+  
Sbjct: 104 ESARIQVLLARLALAEEQPDAARRHLLAALQHDPA-DLEAAYLLFQLLEAHPTPGDTLTA 162

Query: 311 LKRALRLEEINKESVE---SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                R+     ++       +  +    +  ++ +  A     +   P +
Sbjct: 163 DTLLARMLRHRSDNQALWLERLRRAIATQDARTLQETIAHLQALVDTWPDE 213


>gi|146280674|ref|YP_001170827.1| cellulose synthase subunit BcsC [Pseudomonas stutzeri A1501]
 gi|145568879|gb|ABP77985.1| cellulose synthase operon C protein, putative [Pseudomonas stutzeri
           A1501]
          Length = 1152

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 84/325 (25%), Gaps = 65/325 (20%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + AL     ++       A  +  Y        +     L   Q+A AE + + A     
Sbjct: 353 WLALEQADQALEQQRPREAAAL--YTRALRQQPDSLFAALGLAQVAEAEGRTDEAEAAYR 410

Query: 145 MMLQIPATREFAVYSLYF------------------------------------------ 162
            +L        A+  L                                            
Sbjct: 411 RLLARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLARYQLQAD 470

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++   GD  +A     +A  + P+ PW+T  +         +  A +  +          
Sbjct: 471 QALERGDQAAASEALRQARRLDPNDPWLTYRLANSLRTQGAFYEADSTFDDLLARKPADP 530

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-----NKKR 277
             R    +  +    D   + +     I++    D+       A +    +      K R
Sbjct: 531 TTRYAHALYLAAAERDAQALTSLQQ--IQASDWNDD---IRALATRVERREFMSRVAKLR 585

Query: 278 KAEVILEKI----WKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVES 327
            A            ++  H +      +   +     E    +   A  L  I+ E   +
Sbjct: 586 AAGRETAAADLMQQRLRSHGDSVDDLLLLADWAVERGEPAAAQSYLARAL-RIDPEHAAA 644

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAM 352
            +   ++ L  G +++A      A 
Sbjct: 645 RLAQIELLLAAGQVNEASQALHDAP 669



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 86/286 (30%), Gaps = 28/286 (9%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q    +R    A      + Q P +   A+  L   +   G  + A+    + L   P  
Sbjct: 361 QALEQQRPREAAALYTRALRQQPDSLFAAL-GLAQVAEAEGRTDEAEAAYRRLLARDPAN 419

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIAR----SLENADKGDM 242
                 +V+ Y       RA+ F+        +E+N  R  LL+AR    + +  ++GD 
Sbjct: 420 GGAIRGLVRLYRAESA-ERALAFIETLAAPQRQEFNELRNALLLARYQLQADQALERGDQ 478

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---------- 292
            A+     ++ +L  N    +   A SL +Q    +A+   + +    P           
Sbjct: 479 AAASEALRQARRLDPNDPWLTYRLANSLRTQGAFYEADSTFDDLLARKPADPTTRYAHAL 538

Query: 293 ------PEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAH 345
                  + A   T L              L   + +    S V   + A   G    A 
Sbjct: 539 YLAAAERD-AQALTSLQQIQASDWNDDIRALATRVERREFMSRVAKLRAA---GRETAAA 594

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                 ++        LLL                +   AL   P+
Sbjct: 595 DLMQQRLRSHGDSVDDLLLLADWAVERGEPAAAQSYLARALRIDPE 640



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 84/274 (30%), Gaps = 40/274 (14%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
                   E+ + +L  P  R      L       G   +A+    +AL   P  P +  
Sbjct: 252 AGDARQHLERQQRLLADPLWR-AGQEGLRL--LDQGQDEAAEAKLRQALRGYPKDPELLG 308

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWN----------RNRAILLIARSLENADKGDM 242
            +    +       A+ +  + K N  + +            R  L + ++ +  ++   
Sbjct: 309 GLGLALMRPGHRPEALVYFQRAKDNEADIDNLSKWSDLIDSTRYWLALEQADQALEQQRP 368

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +      +L+   +S+ A++  A+   ++ +  +AE                  Y  L
Sbjct: 369 REAAALYTRALRQQPDSLFAALGLAQVAEAEGRTDEAE----------------AAYRRL 412

Query: 303 LSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           L+ +    G ++  +RL            I +  A +    ++     +LA         
Sbjct: 413 LARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLA--------R 464

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
           + L A  +     +        + A    P+  W
Sbjct: 465 YQLQAD-QALERGDQAAASEALRQARRLDPNDPW 497



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 16/120 (13%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--------- 214
           +   G+  +AQ Y  +AL I P+      A ++  + A + + A   L+           
Sbjct: 618 AVERGEPAAAQSYLARALRIDPEHAAARLAQIELLLAAGQVNEASQALHDAPPQFGNDEP 677

Query: 215 KKNAKEWNRNRAILLIARSLENA-------DKGDMIASYHDAIESLKLCDNSIMASICAA 267
               +  N   A+  +A++ +         ++ D +     A    +   +  MA    A
Sbjct: 678 NAIRRLANSWAAVGEVAKARQMLEQLEAQVEEPDPLLRRDTARLLARTEPDRAMAYYRKA 737


>gi|298248828|ref|ZP_06972633.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297551487|gb|EFH85353.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 635

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 68/251 (27%), Gaps = 22/251 (8%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             +L         +   A    E    +  T   A+        ++G L  A     +A 
Sbjct: 361 TLVLRAFSLRELGKLEEALAVYEQAANLDPTEARALRGKGDVLLQLGRLEEALAVYEQAA 420

Query: 182 DISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           ++ P        + ++Q          A+    Q      + +        ++     + 
Sbjct: 421 NLDPIGSLCGKGDVLLQL----GRLEEALAVYEQAI----DLDPTDVSTYWSKGDVLDNL 472

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G    +      +  L    +         L    +  +A    EK   + P     + Y
Sbjct: 473 GRREEALAVYERATNLDPTDVHTHWLRGDMLRKLGRLEEALAAFEKAVNLEPT----HFY 528

Query: 300 THLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             L     +  L R         +   +    + + +   ++   +G +++A A     +
Sbjct: 529 ALLGKGRVLDNLGRLEEALVVFEKAINLEPIHILTRLEKGRVLDNLGRLEEALAVYEQII 588

Query: 353 KIAPR-KEIFL 362
            + P     + 
Sbjct: 589 NLDPTDASAYT 599



 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +   A    E    +  T      +          G L  A     KA+++ P   +  
Sbjct: 473 GRREEALAVYERATNLDPTDVHTHWLRGDMLRKL--GRLEEALAAFEKAVNLEPTHFYAL 530

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
               +          A+    +      E       L   R L+N   G +  +     +
Sbjct: 531 LGKGRVLDNLGRLEEALVVFEKAI--NLEPIHILTRLEKGRVLDNL--GRLEEALAVYEQ 586

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            + L      A    + +L+   ++ +A  + E+I + +P P
Sbjct: 587 IINLDPTDASAYTFKSSALLKLGRREEALAVYEQIKEKSPGP 628


>gi|297569516|ref|YP_003690860.1| response regulator receiver protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925431|gb|ADH86241.1| response regulator receiver protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 387

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 68/229 (29%), Gaps = 21/229 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A       +  +   +     L   ++   +     A    E  +Q       + 
Sbjct: 153 GDLAGAIAEAKKAASLNAHSSRPFREL--GRLFAKKGDIQKAQACFEQAIQRNRLDVTSY 210

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           ++L   + R  +   A  Y ++A++ISP          +      +   A   L    ++
Sbjct: 211 HALGQIAFRRNNSEKAIGYFSRAMEISPRHTDRALQFAKLLFKKNQLQEAEKVLKLVLRH 270

Query: 218 A---KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                ++    A + +   L N        +     E +K              ++I+  
Sbjct: 271 KTNDTDFKEEVAEIALQAGLSNL-------ALKAFREVIKADPQRTYLHKRIGTAMINAG 323

Query: 275 KKRKAEVILEKIWKVNPHPE-----IANIYTH----LLSENTVGKLKRA 314
           +  +   +LE   +  P        +A  Y      + ++N   +  R 
Sbjct: 324 EYAEGTRMLETALEKTPQDIQTMLRLARAYLEMKMPMRADNWASRALRI 372


>gi|16265215|ref|NP_438007.1| TonB-dependent receptor protein [Sinorhizobium meliloti 1021]
 gi|15141355|emb|CAC49867.1| hypothetical exported protein, TonB-dependent receptor protein
           [Sinorhizobium meliloti 1021]
          Length = 1200

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 7/162 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             DL  A     +AL  +P +  +  ++        +   A        K A   +    
Sbjct: 421 DNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAA----EAAFKQAIALDPLDP 476

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     +++  D+  M  +  +   +L +  +  +A +   +  +   +  KA   L   
Sbjct: 477 VSHANLAIQYMDEMRMAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAG 536

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESV 325
              NP    A +           ++  A  L   + ++    
Sbjct: 537 STANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPNDP 578


>gi|288817575|ref|YP_003431922.1| hypothetical protein HTH_0254 [Hydrogenobacter thermophilus TK-6]
 gi|288786974|dbj|BAI68721.1| hypothetical protein HTH_0254 [Hydrogenobacter thermophilus TK-6]
 gi|308751175|gb|ADO44658.1| TPR repeat-containing protein [Hydrogenobacter thermophilus TK-6]
          Length = 159

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 5/150 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDIS 184
                        A E  +  ++I  T     Y+    +   +G+   A     +A+ + 
Sbjct: 14  RAYTYHMMGDIEKAIEFYKQSIEIYPTALA--YTFLGWAYSMLGEYEKAIEMCEQAIKLD 71

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           PD       +    +    +  A+ +L +         R+   + +AR+      G    
Sbjct: 72  PDLGNPYNDIGSYLIALGRYEEAVPWLKRAIVAKNYEPRHYPHMNLARA--YLAMGRFKD 129

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +  +A  ++KL  +   A I   + L   N
Sbjct: 130 ALKEAENAIKLAPDYKPAHILKHQILGMLN 159



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 12/143 (8%)

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           R  A  L  R+      GD+  +     +S+++   ++ A      +     +  KA  +
Sbjct: 5   RKDAQELFNRAYTYHMMGDIEKAIEFYKQSIEIYPTAL-AYTFLGWAYSMLGEYEKAIEM 63

Query: 283 LEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            E+  K++  P++ N Y  +          E  V  LKRA+  +          + +++ 
Sbjct: 64  CEQAIKLD--PDLGNPYNDIGSYLIALGRYEEAVPWLKRAIVAKNYEPRHY-PHMNLARA 120

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
            L MG    A  +A  A+K+AP 
Sbjct: 121 YLAMGRFKDALKEAENAIKLAPD 143


>gi|213649587|ref|ZP_03379640.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
          Length = 221

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 4/129 (3%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 22  IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81

Query: 81  YDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             +  K     L+ +A  +     K M              + YLL  + A        A
Sbjct: 82  RRRARKQTEQALLKLAEGDYQQVEKLMSKNADH---AEQPVVNYLLAAEAAQQRGDEARA 138

Query: 140 HEKLEMMLQ 148
           ++ LE   +
Sbjct: 139 NQHLERAAE 147


>gi|145234446|ref|XP_001400594.1| pre-mRNA-splicing factor prp1 [Aspergillus niger CBS 513.88]
 gi|134057540|emb|CAK48894.1| unnamed protein product [Aspergillus niger]
          Length = 939

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 115/334 (34%), Gaps = 45/334 (13%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SIA      AR +++Y  +         +       A  ER +       +++ +     
Sbjct: 550 SIARGKYETARAIYAYALRVFVNRRSIWIA-----AAELERNHGSKEALWQVLEKAVEAC 604

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P + E  +  L  E  + G+++ A+R   +A + +P+   +  A V+    A + S A  
Sbjct: 605 PQSEELWLQ-LAKEKWQSGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADANQTSEARE 663

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240
            L   ++ A         +   R L N D+                              
Sbjct: 664 LLATARREAGTDRVWIKSVAFERQLGNIDEALDLVNQGLQIYPKADKLWMMKGQIYEAQN 723

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
               +        + C+ SI   + A++         KA  +L++     P  PE+    
Sbjct: 724 KYPQAREAYGTGTRACNKSIPLWLLASRLEEKAGAVVKARSVLDRARLAVPKSPELWTES 783

Query: 300 THLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             +  E     + +A  L     +E   S ++ S+    +    Q  A+++ A+K A   
Sbjct: 784 VRV--ERRANNIAQAKVLMAKALQEVPTSGLLWSESIWHLEPRAQRKARSLEAIKKADND 841

Query: 359 EIFLL-LAQIEQANSHNTDKILYWTQSALHAMPD 391
            I  + +A+I        +K L W + A+ +  D
Sbjct: 842 PILFITVARIFWGERR-LEKALTWFEKAIVSDSD 874


>gi|328868476|gb|EGG16854.1| RNA polymerase II complex component [Dictyostelium fasciculatum]
          Length = 1047

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 59/158 (37%), Gaps = 1/158 (0%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A +  + +L+I      A+ +L       GD+++  +   +A +++P+ P V   
Sbjct: 253 GKIEAAKKAFQRVLEIDLDNVDALVALATIHTNQGDIDTGMKLIVQAYELAPNNPIVLNQ 312

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +    ++++ +  L Q   +  + N+ +A      +           +  +  ++ 
Sbjct: 313 LANHFFYKGDYTK-VHALAQAAMSNTDINQIKAEASYIIAKAYHATDKWNEALQNYHQAT 371

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               +  +A     +  +  N   KA    E + +  P
Sbjct: 372 LKSPDFYLAQFGLGQVYLHNNDYEKAVGCFEAVLEKQP 409


>gi|324503304|gb|ADY41438.1| Pre-mRNA-processing factor 6 [Ascaris suum]
          Length = 970

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 93/255 (36%), Gaps = 34/255 (13%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----------- 216
           GD+ S++    +A   +P++  +  A V+      E+ RA   L + ++           
Sbjct: 651 GDVKSSREILARAFQNNPNSEEIWMAAVKLESENNEYQRARKLLEKAREIAPSPRIFLKS 710

Query: 217 ------------------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                             +A +   + A L +      + + +   +     E +K C +
Sbjct: 711 VRLEWCLGDLKAAKKLLLDALDRYPDTAKLYLMMGQILSQEDNFNEARRYYCEGVKRCPS 770

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317
           SI   I  ++   SQ +  KA   LE+    NP +PE+      + +   + +L    RL
Sbjct: 771 SIPLWIWLSRLEESQKQIIKARSDLERARLQNPKNPELWLESIRIEARAGLRELAH-ERL 829

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTD 376
                E   S  + ++ A+ M        K++ A+K      ++ L ++++         
Sbjct: 830 ARALHECEHSGRLWAE-AIFMEERHGRRTKSVDALKKCEHDADVLLAVSKLFWTERK-VK 887

Query: 377 KILYWTQSALHAMPD 391
           K   W Q  +   PD
Sbjct: 888 KAREWFQRTVKIDPD 902



 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 85/228 (37%), Gaps = 23/228 (10%)

Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222
                  A+     AL + P   + W   A  ++ +  A+ +      L    +   +  
Sbjct: 581 AQEAFECARAVYRHALSVYPTKKSIWFAAADFERNHGTAESYD---DLLQSAVEKCPKAE 637

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L +  +     KGD+ +S      + +   NS    + A K     N+ ++A  +
Sbjct: 638 ----TLWLMYAKSKWMKGDVKSSREILARAFQNNPNSEEIWMAAVKLESENNEYQRARKL 693

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL----EEINKESVESLVIVSKIALEM 338
           LEK  ++ P P I      +  E  +G LK A +L     +   ++ +  +++ +I  + 
Sbjct: 694 LEKAREIAPSPRI--FLKSVRLEWCLGDLKAAKKLLLDALDRYPDTAKLYLMMGQILSQE 751

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN------SHNTDKIL 379
            + ++A       +K  P      + L+++E++         + ++  
Sbjct: 752 DNFNEARRYYCEGVKRCPSSIPLWIWLSRLEESQKQIIKARSDLERAR 799


>gi|301609916|ref|XP_002934497.1| PREDICTED: tetratricopeptide repeat protein 13 [Xenopus (Silurana)
           tropicalis]
          Length = 839

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
               + A +    MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 136 SGLQDEAIKHFSSMLQEEPDLVSAIYGRGIAYARKGLQDIKNAELALFELSRVISLEPDH 195

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        S A++ L +  +        R+R  L            D +A+
Sbjct: 196 PEVFEQRAEILSPLGRISEALSDLTRAIQLQPSARLYRHRGTLHFISE-------DYLAA 248

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
             D   SL L  N    ++         +   ++A    ++  K     +  +  +   Y
Sbjct: 249 QEDFQRSLGLNQN-QPIAVLYKGLTFFHRGLLKEAIDSFKEALKQKSNFIEAYKSLGQAY 307

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +      ++   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 308 RELGNFEAA--MENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNFKRCLQLEPYNE 365

Query: 360 IFLLL 364
           +   +
Sbjct: 366 VCQYM 370


>gi|238020698|ref|ZP_04601124.1| hypothetical protein GCWU000324_00588 [Kingella oralis ATCC 51147]
 gi|237867678|gb|EEP68684.1| hypothetical protein GCWU000324_00588 [Kingella oralis ATCC 51147]
          Length = 390

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 98/311 (31%), Gaps = 42/311 (13%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L  P T    R   +Y L       G ++ A++   + L     A  
Sbjct: 89  GENDKAIAMHKALLDSPDTVGDKRTRVLYELGLNYQSAGLVDRAEQIFLE-LQQGNMAKQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY--- 246
             E ++  Y   ++W +AI        + + +    A      +     K     +    
Sbjct: 148 ANEVLLNIYQQDRDWEQAIATAQLLAHDEQTYQFEMAQFYCEIAQSELFKSQFEQARAHI 207

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE- 305
             A+ + K C     A++        Q   + A      I K N      + Y  ++ E 
Sbjct: 208 QAALSANKKC---TRANMILGDIEQKQGNFQAAIDAYTAIEKQN------HAYLSMIGEK 258

Query: 306 --NTVGKLKRA----LRLEEINKESVESLV--IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +    L +A      L    K   +  +  ++ + +L +   ++A+   +  ++I P 
Sbjct: 259 LYDAYDALGKAQDGLEVLIGYAKMFPQLDLNSVIYEKSLLLWGEEKANQTMVELVRIKPD 318

Query: 358 K-EIFLL----LAQIEQANSHNTDKILYWTQSALHAMPDPLWI--SDDGYLSSV---WLP 407
              ++ L    ++ +      + D +       +       W+    + +  S    W  
Sbjct: 319 LNGMYRLLGLQMSDLNPQWKADADMMRTVIGRQVQRS----WMYRCRNCHFKSQVFFWH- 373

Query: 408 LSPISKTLCYF 418
             P       F
Sbjct: 374 -CPACNKWETF 383


>gi|73540408|ref|YP_294928.1| HemY, N-terminal:tetratricopeptide TPR_4 [Ralstonia eutropha
           JMP134]
 gi|72117821|gb|AAZ60084.1| HemY, N-terminal:Tetratricopeptide TPR_4 [Ralstonia eutropha
           JMP134]
          Length = 396

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/399 (12%), Positives = 129/399 (32%), Gaps = 16/399 (4%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +RL+ +  ++        + + +   +V + +       S  + L++L    F    + +
Sbjct: 1   MRLLFWVAILFGGAVGLALFTQFNHSNVVLFYPPYRVELSLNLALALLLLVFFVVWTVLS 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
            +R     P        +   +K   AL   + ++ A     A +               
Sbjct: 61  TARHLSEMPRRAAAYRERSRMNKAQAALRESIENLFAGRFARAERAAREAQSWDAQVQTA 120

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+  + A   ++ +   +     +  P   +  + S+        D + A     + 
Sbjct: 121 A--LVGARAAHRMQETDR-RDAWMAQVTDPEREQARLVSMAELLMDARDADGALETIAQL 177

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                    V    ++ +   K WS  +  L +  +     +   A+ L   + E     
Sbjct: 178 QAQGARQIHVQRIALRAHQHLKNWSEVLR-LARSLEKRNALHPVLALRLKQMACEAMLDE 236

Query: 241 DMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
               +   +     L  +   A+     AA+   +  ++ +A  I+E   KV+    +  
Sbjct: 237 RRHDAEALSSFWRTLSADERRAARIAEPAARYFAALGRQDEARRIIEDALKVHWDSRLVL 296

Query: 298 IYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            Y     + + +  +++A +    +    +    +  + L      +A +    A+K A 
Sbjct: 297 RYADCARAGHALPLIQQAEKWINEHPADPDLYFTLGVLCLGEQLWGKAQSSFERALKYAD 356

Query: 357 -------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                  R    L LA++ +      +   ++ +SA+ A
Sbjct: 357 RHQQTRLRVRTHLALARLFEETERPEEAQRHYRESAMLA 395


>gi|32474237|ref|NP_867231.1| PKR inhibitor (translation regulation) [Rhodopirellula baltica SH
           1]
 gi|32444775|emb|CAD74776.1| probable PKR inhibitor (translation regulation) [Rhodopirellula
           baltica SH 1]
          Length = 778

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 88/267 (32%), Gaps = 16/267 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            +     K  S   +      + L   YLL       +    +A    + +   P+  E 
Sbjct: 352 GDEERIAKATSAAIKLLQDDPKELSTAYLLRAMT-QDKTDDQLADLT-KAIELDPSNAEA 409

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            V        + GD + A     K L++ P    +  A VQQ V       A+  L++  
Sbjct: 410 -VRQRAGLRMQEGDFDKAVEDLQKVLELDPTNEQIAAATVQQLVELDRADDALELLSKTI 468

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +        R   L+  +++  D      +  D  ++L +     +A +  A+  + ++ 
Sbjct: 469 QARPSEGLYRLRALLYTNMDREDD-----ALADLNKALAMQPKDPIALLQRAEISLRRDD 523

Query: 276 KRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            + A+  L+    + P  E      +   +  +        +     L + + + V   +
Sbjct: 524 VKDAKRDLDAAIDLAPQVEQLDQAIVVRCFIAVEEGRMADAINDMKILIDRSPDDVYRQL 583

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
            ++ + L+     QA       +   P
Sbjct: 584 QLANLYLQDDRPRQAIDMLSGVLDRDP 610



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 55/138 (39%), Gaps = 11/138 (7%)

Query: 230 IARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLI----SQNKKRKAEV 281
           +A ++        +    +A+    ++++       A +  A+  +     + +  KA  
Sbjct: 303 LAGAMTRMRGRRALQVRDEALRVLDQAIENDPELAEAHMLIARLNLLPDGDEERIAKATS 362

Query: 282 ILEKIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              K+ + +P  E++  Y    +  + T  +L    +  E++  + E++   + + ++ G
Sbjct: 363 AAIKLLQDDPK-ELSTAYLLRAMTQDKTDDQLADLTKAIELDPSNAEAVRQRAGLRMQEG 421

Query: 340 SIDQAHAKAMLAMKIAPR 357
             D+A       +++ P 
Sbjct: 422 DFDKAVEDLQKVLELDPT 439


>gi|115350209|ref|YP_772048.1| hypothetical protein Bamb_0153 [Burkholderia ambifaria AMMD]
 gi|115280197|gb|ABI85714.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           AMMD]
          Length = 754

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 81/261 (31%), Gaps = 34/261 (13%)

Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +++ A    E + +        T    +      +C++G   +      +A+ +  D 
Sbjct: 18  AGRFDDARMLYEAIRRDEPDQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72

Query: 188 PWVTEA--VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            ++     +++ +    +   AI    +    A ++    A           D GD  A+
Sbjct: 73  VYLNNFGNMLRAHGRLGD---AIGAYRRAIALAPDY----AEAHSNLGNALRDAGDADAA 125

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-S 304
                ++L L  +   A      +L  + +   A    EK   ++P       Y     +
Sbjct: 126 MLSCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP------GYAQARFN 179

Query: 305 ENTVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  V + +R              +      +   +  +  E    + A A    A +   
Sbjct: 180 QGNVLRAQRRPDEAIACYREAIALQPHLHAAHHALGVLLFERDDREAAIASLTRAAESGE 239

Query: 357 RKEIFLLLAQIEQANSHNTDK 377
              +F L A +E+A   +   
Sbjct: 240 ADCLFHLAAALERAGDLDGTV 260


>gi|119480403|ref|XP_001260230.1| mRNA splicing factor (Prp1/Zer1), putative [Neosartorya fischeri
           NRRL 181]
 gi|119408384|gb|EAW18333.1| mRNA splicing factor (Prp1/Zer1), putative [Neosartorya fischeri
           NRRL 181]
          Length = 938

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 115/335 (34%), Gaps = 47/335 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SIA      AR +++Y  +            L    A  ER +       +++ +     
Sbjct: 548 SIARGKYETARAIYAYALRVFVNRR---SIWLAA--ADLERNHGSKEALWQVLEKAVEAC 602

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P + E  +  L  E  + G+++ A+R   +A + +P+   +  A V+    A +  +A  
Sbjct: 603 PQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADADQTDQARE 661

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240
            L   ++ A         +   R L N D+                              
Sbjct: 662 LLATARREAGTDRVWIKSVAFERQLGNIDEALDLVNQGLQLYPKADKLWMMKGQIYEYQN 721

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +        + C  S+   + A++         KA  +L++       P+ A ++T
Sbjct: 722 KYPQAREAYSTGTRACPKSVPLWLLASRLEEKSGAVVKARSVLDRARLAV--PKSAELWT 779

Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356
             +  E     + +A  L     +E   S ++ S+    LE  +  +A +      K+  
Sbjct: 780 ESVRVERRANNIGQAKVLMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDN 838

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +F+ +A+I        +K + W + A+ +  D
Sbjct: 839 DPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 872



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 9/151 (5%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  +  +G    +      +L++  N     + AA    +   K     +LEK  +  P 
Sbjct: 545 AKGSIARGKYETARAIYAYALRVFVNRRSIWLAAADLERNHGSKEALWQVLEKAVEACPQ 604

Query: 293 PE-----IA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            E     +A   +     ++    L RA      N  + +  +   K+  +    DQA  
Sbjct: 605 SEELWLQLAKEKWQAGEIDDARRVLGRA---FNQNPNNEDIWLAAVKLEADADQTDQARE 661

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
               A + A    +++     E+   +  + 
Sbjct: 662 LLATARREAGTDRVWIKSVAFERQLGNIDEA 692


>gi|332703109|ref|ZP_08423197.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio africanus str. Walvis Bay]
 gi|332553258|gb|EGJ50302.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio africanus str. Walvis Bay]
          Length = 814

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 5/165 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  S+       AR       +    H   L+ L   Q+A  +     A E      +  
Sbjct: 655 GTTSLRLGEFERARAAFERCLKLKPGHVYSLIRL--GQLAERDNDLPTAGEYYLRASETK 712

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R   +  L       G    A+    +AL ++P        + + Y+ A E       
Sbjct: 713 IGRILTMRHLARLDLAEGRFEEARENLHQALILNPYDAMAVHLMAKLYLEAGEDPEIAET 772

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           L ++    K        LL   +      G    +      +  L
Sbjct: 773 LARQSVTLKPDKAQYWRLL---AQALEACGKPDEARKAMERAESL 814



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 34/218 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A    E++         A Y+L   S R+G+   A+    + L + P   +    
Sbjct: 628 GRPEQALTLFEIVAAKHPEDLMAAYNLGTTSLRLGEFERARAAFERCLKLKPGHVYSLIR 687

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +    +  ++    +    +    A E    R + +   +  +  +G    +  +  ++L
Sbjct: 688 L--GQLAERD--NDLPTAGEYYLRASETKIGRILTMRHLARLDLAEGRFEEARENLHQAL 743

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
            L     MA    AK  +   +                 PEIA                 
Sbjct: 744 ILNPYDAMAVHLMAKLYLEAGED----------------PEIAETL-------------- 773

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           A +   +  +  +   ++++     G  D+A      A
Sbjct: 774 ARQSVTLKPDKAQYWRLLAQALEACGKPDEARKAMERA 811


>gi|325087689|gb|EGC40999.1| DnaJ domain-containing protein [Ajellomyces capsulatus H88]
          Length = 744

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%)

Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+ V+  L          A   +  ML+          +          G+   A ++ 
Sbjct: 395 RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 452

Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225
             AL + PD+          + +++          ++++  AI    +  +   +     
Sbjct: 453 KLALSLDPDSAQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 512

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + LL  R+    +      +  D   +LKL    + A    AK+  +     +A    +K
Sbjct: 513 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 572

Query: 286 IWKVNP 291
           I + NP
Sbjct: 573 IAEANP 578


>gi|320536427|ref|ZP_08036464.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320146737|gb|EFW38316.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 865

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 8/165 (4%)

Query: 123 YLLEVQIALAERQYNIAHE-KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           +L  +Q    E++  +A E   + +L  P       ++L     + G L +A     +A+
Sbjct: 151 HLGTIQA--LEKKTELAIETYYKGLLLDPNHPFL-HFNLANIFYKQGKLTAALESYLEAV 207

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              P      + +   Y+   +   A+       +   E ++N   L    +     KG 
Sbjct: 208 KTMPGFIEAQKNIADIYLKIGKTDLALHSYKTLIQIEGESDKNLTALGTLYA----QKGF 263

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              S     ++LK+ +    A++  A+ LI++ K  +A   LE  
Sbjct: 264 KKESKIYYTQALKINNKFAPAAVGIAEILIAEKKYLEALHALEVA 308


>gi|296425124|ref|XP_002842093.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638351|emb|CAZ86284.1| unnamed protein product [Tuber melanosporum]
          Length = 837

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 67/205 (32%), Gaps = 7/205 (3%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + GD++ A+    KA + +P+   +  A V+      + + A   L   ++ A 
Sbjct: 568 LAKEKWQAGDIDGARIVLGKAFNQNPNNEDIWLAAVKLEAENTQHAAARELLATARREAG 627

Query: 220 EWNRNRAILLIAR-------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                   +   R       +L+    G ++ +      +      S      + +    
Sbjct: 628 TDRVWIKSVAFERQQGNTDAALDLEKAGVLVRARSVLDRARLAVPKSAQLWCESVRVERR 687

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            N   +A+ ++ K  +  PH  +    +    E    +  R +   E         V V+
Sbjct: 688 ANNISQAKTLMAKALQECPHSGLLWAESIWYLEQRTHRRPRLVEAIEKVGNDPLLYVAVA 747

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
           +       + +A      A+ + P 
Sbjct: 748 RNFWVERKLPKAINWFEKAILVDPD 772


>gi|198462498|ref|XP_001352454.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
 gi|198150850|gb|EAL29950.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
          Length = 1193

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 95/296 (32%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S++     K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   + +E+ + +++I LE   +  + A    A KI   K  + + A+I
Sbjct: 399 THLKKVTEQFPDDIEAWIELAQI-LEQNDLAASLAAYGTASKILKDKAKYEIPAEI 453


>gi|296161531|ref|ZP_06844336.1| Tetratricopeptide TPR_4 [Burkholderia sp. Ch1-1]
 gi|295888175|gb|EFG67988.1| Tetratricopeptide TPR_4 [Burkholderia sp. Ch1-1]
          Length = 613

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 102/325 (31%), Gaps = 54/325 (16%)

Query: 108 SYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--L 160
           +    Q +     L       +L  ++AL   Q   A++    + +       A  +  +
Sbjct: 67  ASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEI 126

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +    D  +A +        +P++    +      VL+     A   L ++      
Sbjct: 127 ALAAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGRPDDAEQILARELARVPA 183

Query: 221 WNRNRAILLI--------------------------------ARSLENADKGDMIASYHD 248
            NR  AIL +                                A + +     D   +   
Sbjct: 184 DNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDMNRPEAQLALARQQLVSDDAPGARKS 243

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSE 305
             ++L L  + + A++  ++      ++++    LEK  + NP  H   +A    +L S+
Sbjct: 244 LEQALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASD 301

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---E 359
                 K+   +   N   +  L+ ++ I ++  + ++A           +  P     +
Sbjct: 302 RLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPGQ 361

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384
            ++ LAQ+      N      W   
Sbjct: 362 AYIYLAQL-SLEQKNDAAASDWLNK 385



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 85/253 (33%), Gaps = 30/253 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY----- 176
             L   Q+ LA  + + A ++ E+M +  A     + +L     +  + N AQ Y     
Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYA 348

Query: 177 --ATKALDISPDAPWVTEAVVQQY----VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             A K     P   ++  A +         A +W   I+            ++      I
Sbjct: 349 QQAEKTPGADPGQAYIYLAQLSLEQKNDAAASDWLNKIS----------PSSQQYVPAQI 398

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIW 287
            R+   A +G    +    + +     +    ++ A   A  L    +  +AE  L++  
Sbjct: 399 TRAQLLAKQGKADDARK--LLANLSAPDPRDQALIARTDAAILFDARRYPEAETRLQQAT 456

Query: 288 KVNP-HPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVS-KIALEMGSIDQ 343
              P  P++   Y     +     +   +  +L +   ++ ++   +   +A     + +
Sbjct: 457 AQFPDDPDLTYDYAMSAEKTGHYDVMEAQLRKLIQTQPDNPQAYNALGYSLADRNQRLAE 516

Query: 344 AHAKAMLAMKIAP 356
           A      A  +AP
Sbjct: 517 ADKLVEKASSLAP 529


>gi|167824071|ref|ZP_02455542.1| hypothetical protein Bpseu9_10360 [Burkholderia pseudomallei 9]
          Length = 1240

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++Q +   +   A   +     +  ++ +   +  +L +  +       +  A+      
Sbjct: 563 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 615

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++L  +  +A    A +    + +R+ ++I       + H    N+       +    L
Sbjct: 616 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 675

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369
           + A R  ++  +  +++++ +++AL+ G  D+A ++     +  P        L+  +  
Sbjct: 676 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 735

Query: 370 ANSHNTDKILYWTQSALH 387
               +        Q AL 
Sbjct: 736 LERRDDAIAA--LQRALE 751



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 15/208 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  D   A + A +A+ ++PD         +  +   ++  A++   + ++   +   +
Sbjct: 666 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 725

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L+ A +     + D IA+   A+E          A     +  +   +  KA  + +
Sbjct: 726 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 781

Query: 285 KIWKVNPHPEIANI-------YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           +   V  H E+A+        Y +L + +         R  EI   + E+L  +  +   
Sbjct: 782 R--YVGAHGELASAHTMCGLVYHNLKAYDRAE--ASLRRALEIEPHNAEALFALGTVLER 837

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           +  + ++      A+ I     + + LA
Sbjct: 838 VDRLAESEEVLRRALTIRRDYRVLVNLA 865


>gi|46202065|ref|ZP_00053827.2| COG3914: Predicted O-linked N-acetylglucosamine transferase,
           SPINDLY family [Magnetospirillum magnetotacticum MS-1]
          Length = 722

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 7/127 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  D   A     +AL   PD       + +          A     +  +        
Sbjct: 146 KRESDAEKAM---REALRCKPDLVPAHMGLGEFLAAMGRHDDAAAHFRRAVEIQPA---- 198

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A    A   E      + A+      +L +  + + A +   +  +   +  +A  +LE
Sbjct: 199 NADAACALGAELQAAFRIEAATEAYRHALAVDPDLVAALVGLGRVHLEAGRDHEAVPLLE 258

Query: 285 KIWKVNP 291
           + ++++P
Sbjct: 259 RAYRLSP 265



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 13/228 (5%)

Query: 152 TREFAV-YSLYFE--SCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           TR      +L     + R +   + A       +   P        +      A+ +  A
Sbjct: 58  TRFAGHARALSVLGPALRNLKKYDEAVECGKATVAAVPQFAPAHAELGAALAGAERYEEA 117

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +    +    A ++    A    A+            +     E+L+   + + A +   
Sbjct: 118 LGCYERALALAPDF----AEAWCAKGRVLFALKRESDAEKAMREALRCKPDLVPAHMGLG 173

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KE 323
           + L +  +   A     +  ++ P    A             +++ A            +
Sbjct: 174 EFLAAMGRHDDAAAHFRRAVEIQPANADA-ACALGAELQAAFRIEAATEAYRHALAVDPD 232

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
            V +LV + ++ LE G   +A      A +++P +   L +  + +  
Sbjct: 233 LVAALVGLGRVHLEAGRDHEAVPLLERAYRLSPDEGGILDMLVLARLQ 280



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 5/163 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L   L ++  H+   A      V  Q    +       E+Q A    +   A E     L
Sbjct: 172 LGEFLAAMGRHDDAAAH-FRRAVEIQPANADAACALGAELQAAF---RIEAATEAYRHAL 227

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            +      A+  L       G  + A     +A  +SPD   + + +V   +    W   
Sbjct: 228 AVDPDLVAALVGLGRVHLEAGRDHEAVPLLERAYRLSPDEGGILDMLVLARLQLCAWDG- 286

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           +  L          +R      +A   +       +A+   A 
Sbjct: 287 LEPLRAALLERIRADRMVVNPFVAILADADSAHQDLAARQWAR 329



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 60/220 (27%), Gaps = 21/220 (9%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-------------NRAILLIARSLEN 236
                +     A   +RA++ L    +N K+++                A          
Sbjct: 50  AANTRLVLTRFAGH-ARALSVLGPALRNLKKYDEAVECGKATVAAVPQFAPAHAELGAAL 108

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291
           A       +      +L L  +   A     + L +  ++  AE  + +  +  P     
Sbjct: 109 AGAERYEEALGCYERALALAPDFAEAWCAKGRVLFALKRESDAEKAMREALRCKPDLVPA 168

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           H  +      +   +         R  EI   + ++   +         I+ A      A
Sbjct: 169 HMGLGEFLAAMGRHDDAA--AHFRRAVEIQPANADAACALGAELQAAFRIEAATEAYRHA 226

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           + + P     L+        +    + +   + A    PD
Sbjct: 227 LAVDPDLVAALVGLGRVHLEAGRDHEAVPLLERAYRLSPD 266


>gi|283832922|ref|ZP_06352663.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220]
 gi|291071527|gb|EFE09636.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220]
          Length = 389

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 91/282 (32%), Gaps = 57/282 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL VQ      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       R+G                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L+     DM  +     +      NS   SI   +  + 
Sbjct: 167 LVKLGKDKQRIEIAHFYCELALQQMANDDMDRAMTLLKKGAAADKNSARVSIMMGRVYML 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIA--------NIYTHL-LSENTVGKLKRALRLEEINKE 323
                KA   L+++  ++   E+         + Y HL  ++     L+RA    E N  
Sbjct: 227 NGDYAKAVESLQRV--ISQDKELVSETLEMLQSCYQHLGKNDEWAEFLRRA---VEENTG 281

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           +  + ++++ I       D A       ++  P   +F  L+
Sbjct: 282 AA-AELMLADILEAREGSDTAQVYITRQLQRHPTMRVFHKLM 322


>gi|262197145|ref|YP_003268354.1| hypothetical protein Hoch_3962 [Haliangium ochraceum DSM 14365]
 gi|262080492|gb|ACY16461.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 395

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 85/266 (31%), Gaps = 18/266 (6%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++ A +  +     +   ++     E L               + A   L   ++I  T 
Sbjct: 54  ALTAFDEGMRWMRAAQKRKRTKPRREAL---------------DKARTALRRAVEIDGTV 98

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A ++L       GD   A      AL ++P          + +  A     A T    
Sbjct: 99  WEAWHNLGAIQFAEGDDEGATAAFGSALAVNPVHVGSLFGRAEAHRRAGRTDEARTDYEA 158

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
               + E +  R       +    +      +     ++L+    +    +      ++Q
Sbjct: 159 AVAQSAEDSPQRRNATARLASLLREAKRYDDAVAVIRDTLRTSGANAQVYVELGMIYMAQ 218

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI 330
            +   A ++L K  +++P  P I N Y    L S       +R      ++   +++   
Sbjct: 219 GRDDLATLVLGKAAELDPELPSIYNAYALLALSSGRAQEAFERFDYATSLDPSYLDARFN 278

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
            + + L+ G   +A+ +  + +   P
Sbjct: 279 KASVLLDAGDYARANEELAVVVAQRP 304



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 84/297 (28%), Gaps = 26/297 (8%)

Query: 71  MLFHMLHKRNYDK-GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
                  KR   K   +AL              AR       +      E    L  +Q 
Sbjct: 63  RWMRAAQKRKRTKPRREALDK------------ARTALRRAVEIDGTVWEAWHNLGAIQF 110

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS----P 185
           A        A       L +      +++       R G  + A+     A+  S    P
Sbjct: 111 AE--GDDEGATAAFGSALAVNPVHVGSLFGRAEAHRRAGRTDEARTDYEAAVAQSAEDSP 168

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                T  +      AK +  A+  +    + +       A + +   +    +G    +
Sbjct: 169 QRRNATARLASLLREAKRYDDAVAVIRDTLRTSGA----NAQVYVELGMIYMAQGRDDLA 224

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                ++ +L           A   +S  + ++A    +    ++P    A      +  
Sbjct: 225 TLVLGKAAELDPELPSIYNAYALLALSSGRAQEAFERFDYATSLDPSYLDARFNKASVLL 284

Query: 306 NTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           +     +    L        E +++ V +      MG  DQA ++    ++ AP + 
Sbjct: 285 DAGDYARANEELAVVVAQRPEDMDAQVALGVALRGMGEYDQAKSQWEKVVQEAPTRS 341


>gi|238785127|ref|ZP_04629121.1| Cellulose synthase operon protein C [Yersinia bercovieri ATCC
           43970]
 gi|238713942|gb|EEQ05960.1| Cellulose synthase operon protein C [Yersinia bercovieri ATCC
           43970]
          Length = 1325

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 90/266 (33%), Gaps = 40/266 (15%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD--I 183
             +  LA      A   L  + Q P +    V +L  +    GD  +A     K +   I
Sbjct: 565 SAEAYLANGDSASAAAILRGLAQNPPSAPADVGNLAKDLMAAGDSTTAVSLVRKNISGGI 624

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLENADK 239
              A     A +     +     A   L+    Q   +  E +R R    I ++ E  ++
Sbjct: 625 QGKAGDYA-AQIGVLTQSGLTQEAEALLSNPAIQSSSSPIEISRLRMGSAINQADELREQ 683

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G   A+Y   I +L+    +I   +   +   S     +A  +                Y
Sbjct: 684 GQYAAAYDKLIVALQSDPQNIDLMLAMGRLYQSGKMNDEAGRV----------------Y 727

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +L        LKR       +  +  + V    +AL  G +  A    ML M+     E
Sbjct: 728 AYL--------LKR-------DPTNEGARVGAVNVALAKGDVQSARQ-LMLGMRGPRTPE 771

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSA 385
             LL A++ +A   + ++ L   +SA
Sbjct: 772 RLLLAARVAEAE-GDHEQALALLRSA 796


>gi|189466851|ref|ZP_03015636.1| hypothetical protein BACINT_03227 [Bacteroides intestinalis DSM
           17393]
 gi|189435115|gb|EDV04100.1| hypothetical protein BACINT_03227 [Bacteroides intestinalis DSM
           17393]
          Length = 274

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 80/201 (39%), Gaps = 16/201 (7%)

Query: 173 AQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           A+ Y  +AL + P  P    A++           +++ +A+         A      RA+
Sbjct: 42  AENYIRQALKLEPANP--HNALLFSNLGTIQRRQRDYDQALESYTYALNIAP-----RAV 94

Query: 228 -LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +L+ R+  N + G    +  D    L L  ++  A +  A   ++Q   + A    E++
Sbjct: 95  PILLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQRDLKFARADYERL 154

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL--EMGSIDQ 343
            K++P    A +    L +      K    L ++  E  + + + V++  +  +M  +D 
Sbjct: 155 LKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAGIEQDMQHVDL 214

Query: 344 AHAKAMLAMKIAPRKEIFLLL 364
           A      A+K+ P +    L+
Sbjct: 215 AMIDLEEALKLNPSQTEAYLM 235



 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 7/165 (4%)

Query: 124 LLEVQIALAE-RQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL       E  +   A     ++L      RE  +   Y    +  DL  A+    + L
Sbjct: 97  LLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQR-DLKFARADYERLL 155

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P        +           +A+  LN+            A L +AR+    D   
Sbjct: 156 KLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDP----QDAALYVARAGIEQDMQH 211

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  +  D  E+LKL  +   A +   +  +SQ KK  A+   EK 
Sbjct: 212 VDLAMIDLEEALKLNPSQTEAYLMRGQIYLSQKKKNLAKQDFEKA 256



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 63/172 (36%), Gaps = 13/172 (7%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           ++A  ++ Q  K  +  N + A+L          + D   +      +L +   ++   +
Sbjct: 40  AQAENYIRQALK-LEPANPHNALLFSNLGTIQRRQRDYDQALESYTYALNIAPRAVPILL 98

Query: 265 CAAKSLISQNKKRKAEVI-------LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
             A   +   +  +A  +       LEK  +      +   Y ++   +         RL
Sbjct: 99  NRAALNLEMGRNEQA-RVDYSLVLDLEKDNREA---LLMRAYIYVTQRDLKFARADYERL 154

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIE 368
            +++ ++  + + ++ +  + G++ +A       +   P    +++  A IE
Sbjct: 155 LKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAGIE 206


>gi|170090642|ref|XP_001876543.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164648036|gb|EDR12279.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 918

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 98/284 (34%), Gaps = 10/284 (3%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIG 168
               H      +++L+  +          A   LE   +  P + +  + ++  E+   G
Sbjct: 578 SRAVHHCPQAEVLWLMAAKEKWLAGDVPGARRVLEQAFVANPESEQIWLAAVKLEAEN-G 636

Query: 169 DLNSAQRYATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           +L  A+    +A  ++     W+  AV ++     + S A+  L    +   ++ +   +
Sbjct: 637 ELGVARELLVRARTVADTERIWMKSAVFERQ--QNQLSMALETLAAALQKFPKFAKLYMV 694

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               +      + +   +       +K C       I A++      K  KA  +LEK  
Sbjct: 695 ----QGQILQSQNNYPGARASFSAGVKACPKEATLWILASRLEELDGKSIKARALLEKAR 750

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            VNP  +        + E + G  +    L    +E   S ++ S +A+         A+
Sbjct: 751 LVNPANDTLWAEAVGVEERSGGTAQAKAMLARGLQECPTSGLLWS-MAIWAEPRPMRKAR 809

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           ++ A+K +    I +             +K   W   A+   PD
Sbjct: 810 SVDALKKSADNPIIICTVARLFWQERKIEKARQWFGRAVATDPD 853


>gi|158339139|ref|YP_001520316.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158309380|gb|ABW30997.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 712

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 105/325 (32%), Gaps = 33/325 (10%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
            AL    +   + +   AR + S      T   E  +YL     A+A  Q   A + L+ 
Sbjct: 393 DALINAAIKAQSGDYAGARAVLSQAIG--TSPREARLYLARANYAIASGQTQAALQDLDR 450

Query: 146 MLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +++     E A  +   Y  + R  D   A    ++ ++++P+           Y+   +
Sbjct: 451 VIEFDPKAEQAYWLRGAYRNASR--DAAGAISDFSRVIELNPNRLQAYLWRATLYMAQTD 508

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  AI    Q        +    +    R      +GD   +  D  + +KL   ++ A 
Sbjct: 509 YQSAI----QDYSAIIRLDPKNVLAFSQRGSTRFIQGDQQGALKDYDQLIKLNPKNVEAY 564

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG---KLKRALRLEEI 320
              A         + A      I K+NP    A      LSE+       +    +L+ +
Sbjct: 565 DRRAHVRRYSGNPQGALQDYRMITKINPRNSRAYEQIASLSEDQNDLEGAIAAYGQLQTL 624

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQA-------- 370
                   +   ++  +     +A A     +++ P +  + ++  +  E+A        
Sbjct: 625 KPNDTSVYMSRGQLYEKQKRYVEAIADYTKMIELQPFQTSWFIMRGSAREKAGQRAGAKA 684

Query: 371 ----------NSHNTDKILYWTQSA 385
                        ++     W + A
Sbjct: 685 DYRQVAKLYQQQGDSSSAKDWLERA 709



 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKKNA 218
             ++  +G    A   A      +P    V +A++       + +++ A   L+Q    +
Sbjct: 367 LKQAKSLGMTFKAHLPA-----NAPPPSPVDDALINAAIKAQSGDYAGARAVLSQAIGTS 421

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                  A L +AR+      G   A+  D    ++           A ++   +   R 
Sbjct: 422 P----REARLYLARANYAIASGQTQAALQDLDRVIEFDPK-------AEQAYWLRGAYRN 470

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A                          +  G +    R+ E+N   +++ +  + + +  
Sbjct: 471 ASR------------------------DAAGAISDFSRVIELNPNRLQAYLWRATLYMAQ 506

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 507 TDYQSAIQDYSAIIRLDP 524


>gi|325203452|gb|ADY98905.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
          Length = 389

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   + QQ   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +   +      A+E+ K C            
Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 331 DLDPAWKADADMMRSVIARQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|239930985|ref|ZP_04687938.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 469

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 83/265 (31%), Gaps = 39/265 (14%)

Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           ++ A + L   L+  P     A+  L   +    D   A+R+  +A  + P        +
Sbjct: 110 WSRAEKALRTSLKVRPKGNARALRGLAALANARRDYAGARRWGEEARKLEPKRWTTYPLL 169

Query: 195 VQQYVLAKEWSRAITFLNQ--KKKNAKEWN------------RNRAILLIARSLENA--- 237
           ++      +   A   L++    ++  E              R  A + +A ++  A   
Sbjct: 170 IEACTGLGDHKAAGDMLDRLAALRSGPEVMARAAAVYRDRGWREDAAVQLADAVSAAGEP 229

Query: 238 ---------------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                          ++GD   +     E++++  +   A     ++L +  +  +A   
Sbjct: 230 AERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALTA 289

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL------RLEEINKESVESLVIVSKIAL 336
                   P PE A     L       K  RA       R+        +  +++ +   
Sbjct: 290 YRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLVLGRFEA 349

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361
           + G  + A  +     +  P  E+ 
Sbjct: 350 DHGDAEAAVRRLRAEWERQPSTEVA 374



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 78/298 (26%), Gaps = 40/298 (13%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------I 149
              +   A  M   ++   +         +  + A   R      +    +         
Sbjct: 175 GLGDHKAAGDMLDRLAALRSGPE------VMARAAAVYRDRGWREDAAVQLADAVSAAGE 228

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           PA R   +      +   GD   A R   +A+ I PD         +        + A+T
Sbjct: 229 PAERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALT 288

Query: 210 FLNQKK--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASIC 265
                   +   E+      L  +       +              +    ++ +     
Sbjct: 289 AYRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLV----- 343

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKES 324
             +          A   L   W+  P  E+A+          + +  R+   L    + +
Sbjct: 344 LGRFEADHGDAEAAVRRLRAEWERQPSTEVADAL-----GWALHRAGRSEEALPFALRAT 398

Query: 325 VESLVIVSKIAL----------EMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQ 369
            E      + AL          E+G    A      A++I P      + L  A +E+
Sbjct: 399 DEGRGGGVRSALYVFHRGMIEREVGRDGAARRHLRQALQINPYFSPLRVPLAKAALER 456


>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
 gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 361

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 82/243 (33%), Gaps = 28/243 (11%)

Query: 160 LYFE---SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L+ +     + G+ ++A +  T+ + ++P+ P              +   AI   +  + 
Sbjct: 49  LFNQGVAKIKAGNFSAAIKDFTEVIRLNPNLPEAYNNRGNARSKLGDNKGAIE--DYNQA 106

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                   +A     ++      GD   +  D  ++L L  NS       A++  ++   
Sbjct: 107 INLNPKSEQAYYNRGKARSEL--GDNKGAIEDYNQALNLNPNS-------AEAYNNRGIS 157

Query: 277 RK-------AEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKES 324
           R        A   L +  ++N  P++A  Y++  +      +T G  K       ++  S
Sbjct: 158 RHELKDHVGAMQDLNQAIRLN--PKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNS 215

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
            E+          +G   +A      A+ + P+  +      + +    +    +     
Sbjct: 216 AEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRREFGDHAGAIQDLNQ 275

Query: 385 ALH 387
           AL 
Sbjct: 276 ALR 278



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 4/93 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+GD   A +   +A+ + P                 + + AI  LNQ  +    ++   
Sbjct: 228 RVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRREFGDHAGAIQDLNQALR----FDPKL 283

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           A     R   + + G+   +  D  ++++L  +
Sbjct: 284 AKAYNNRGDTHRELGNHREAIQDYDQAVRLIPD 316


>gi|209519646|ref|ZP_03268436.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
 gi|209499932|gb|EDZ99997.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
          Length = 613

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 106/325 (32%), Gaps = 54/325 (16%)

Query: 113 QHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESC 165
           + +  +  L       +L  +IAL   Q   A++    + +       A  +  +   + 
Sbjct: 72  EKSLPHVPLSSQIVFQVLAAEIALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQ 131

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
              D  +A +        +P +    +      VL+ +   A   L+Q+     + NR  
Sbjct: 132 SPSDALAAAQLWQ---QYAPSSERAAQLDASLLVLSGKPDDASPILSQELAKIPDENRGS 188

Query: 226 AILL--------------------------------IARSLENADKGDMIASYHDAIESL 253
           A+L                                 +A + +     D   +     ++L
Sbjct: 189 AVLALQLLLSHGPNRVGGLHVLQDLLKNDMNRPEAQLAIARQQLLADDAPGARKSLEQAL 248

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENTVGK 310
            +  + + A++  ++      ++++A   LEK  + NP  H   +A    +L S+     
Sbjct: 249 TIKPDYLPAALMLSQMGPE--ERKEAIATLEKYVQQNPKSHDARLALAQMYLASDRLDDA 306

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---EIFLLL 364
            K+   + + N   +  L+ ++ I ++  +  +A           +  P     + ++ L
Sbjct: 307 QKQFEIMRKANSNDLTPLMALALIKIQQKNFAEAQTYLTQYAQQAEKTPGADAGQAYIYL 366

Query: 365 AQIEQANSHNTDKILYWTQSALHAM 389
           AQ+      N      W      A 
Sbjct: 367 AQL-SLEQKNEAAASDWLNKISPAS 390



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 85/253 (33%), Gaps = 30/253 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ----RYA 177
             L   Q+ LA  + + A ++ E+M +  +     + +L     +  +   AQ    +YA
Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMRKANSNDLTPLMALALIKIQQKNFAEAQTYLTQYA 348

Query: 178 TKALDISPDAPWVTEAVVQQ---------YVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            +A + +P A    +A +              A +W   I+            ++     
Sbjct: 349 QQA-EKTPGAD-AGQAYIYLAQLSLEQKNEAAASDWLNKIS----------PASQQYMAA 396

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIW 287
            I R+   A +G    +             +  + +   A  L    +  +AE  L++  
Sbjct: 397 QITRAQLLAKRGKTDEARQLLANLQTSDPRDVALVTRTDAAILFDAKRYSEAEERLQQAT 456

Query: 288 KVNP-HPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVS-KIALEMGSIDQ 343
              P  P++   Y     +     +   +  +L +   ++ ++   +   +A     + +
Sbjct: 457 ANFPDDPDLTYDYAMAAEKTGHYDVMEAQLRKLIQTQPDNPQAYNALGYSLADRNQRLPE 516

Query: 344 AHAKAMLAMKIAP 356
           A      A  +AP
Sbjct: 517 ADQLVEKASSLAP 529


>gi|327478940|gb|AEA82250.1| cellulose synthase subunit BcsC [Pseudomonas stutzeri DSM 4166]
          Length = 1164

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 89/322 (27%), Gaps = 59/322 (18%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + AL     ++       A  +  Y        +     L   Q+A AE + + A     
Sbjct: 353 WLALEQADQALEQQRPREAAAL--YTRALRQQPDSLFAALGLAQVAEAEGRTDEAEAAYR 410

Query: 145 MMLQIPATREFAVYSLYF------------------------------------------ 162
            +L        A+  L                                            
Sbjct: 411 RLLARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLARYQLQAD 470

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++   GD  +A     +A  + P+ PW+T  +         +  A +  +          
Sbjct: 471 QALERGDQAAASEALRQARRLDPNDPWLTYRLANSLRTQGAFYEADSTFDDLLARKPADP 530

Query: 223 RNRAILLIARSLENADKGDMIASYH----DAIESLKLCDNSIMASICAAKS--LISQNKK 276
             R    +  +    D   + +       D  + ++     +      ++   L +  ++
Sbjct: 531 TTRYAHALYLAAAERDTQALTSLRQVPASDWNDDIRALATRVERREFMSRVAKLRAAGRE 590

Query: 277 RKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             A  ++++  ++  H +      +   +     E    +   A  L  I+ E   + + 
Sbjct: 591 TAAADLMQQ--RLRSHGDSVDDLLLLADWAVERGEPAAAQSYLARAL-RIDPEHAAARLA 647

Query: 331 VSKIALEMGSIDQAHAKAMLAM 352
             ++ L  G +++A      A 
Sbjct: 648 QIELLLAAGQVNEASQALHDAP 669



 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 84/274 (30%), Gaps = 40/274 (14%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
                   E+ + +L  P  R      L       G   +A+    +AL   P  P +  
Sbjct: 252 AGDARQHLERQQRLLADPLWR-AGQEGLRL--LDQGQDEAAEAKLRQALRGYPKDPELLG 308

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWN----------RNRAILLIARSLENADKGDM 242
            +    +       A+ +  + K N  + +            R  L + ++ +  ++   
Sbjct: 309 GLGLALMRPGHRPEALVYFQRAKDNEADIDNLSKWSDLIDSTRYWLALEQADQALEQQRP 368

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +      +L+   +S+ A++  A+   ++ +  +AE                  Y  L
Sbjct: 369 REAAALYTRALRQQPDSLFAALGLAQVAEAEGRTDEAE----------------AAYRRL 412

Query: 303 LSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           L+ +    G ++  +RL            I +  A +    ++     +LA         
Sbjct: 413 LARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLA--------R 464

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
           + L A  +     +        + A    P+  W
Sbjct: 465 YQLQAD-QALERGDQAAASEALRQARRLDPNDPW 497



 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 92/327 (28%), Gaps = 48/327 (14%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
            R   +  +AL  G  + A+  +  AR++          ++ +L Y L       +  + 
Sbjct: 463 ARYQLQADQALERGDQAAASEALRQARRLD--------PNDPWLTYRL-ANSLRTQGAFY 513

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQ 196
            A    + +L             +       + ++    A  +L   P + W  +   + 
Sbjct: 514 EADSTFDDLLARKPADPT-TRYAHALYLAAAERDTQ---ALTSLRQVPASDWNDDIRALA 569

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKGDMIASYH 247
             V  +E+   +  L    +     +  +  L         L+  +    ++G+  A+  
Sbjct: 570 TRVERREFMSRVAKLRAAGRETAAADLMQQRLRSHGDSVDDLLLLADWAVERGEPAAAQS 629

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
               +L++      A +   + L++  +  +A   L                     + +
Sbjct: 630 YLARALRIDPEHAAARLAQIELLLAAGQVNEASQALHDA----------------PPQFS 673

Query: 308 VGKLKRALRLEEINKESVESLVIVS-------KIALEMGSIDQAHAKAMLAMKIAPRKEI 360
             +     RL   N  +    V  +       +  +E          A L  +  P + +
Sbjct: 674 NDESNAIRRLA--NSWAAVGEVAKARQMLEQLEAQVEAPDPLLRRDTARLLARTEPDRAM 731

Query: 361 FLLLAQIEQANSHNTDKILYWTQSALH 387
                 +  A              A  
Sbjct: 732 AYYRKAMVDAELVPEGASDADLTQATR 758


>gi|326578043|gb|EGE27907.1| tetratricopeptide TPR_2 [Moraxella catarrhalis O35E]
          Length = 669

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +      +  RA+           E  +  A  +  R+L    +      S   A     
Sbjct: 155 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 208

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + I A        +   +  +A  ++  I   +P  ++  I T ++      K    
Sbjct: 209 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 268

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373
             L+ + + +    V+ + I + +     A      A+ I P    F  L   I +A + 
Sbjct: 269 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 328

Query: 374 NTD 376
             +
Sbjct: 329 LDE 331


>gi|195028406|ref|XP_001987067.1| GH21711 [Drosophila grimshawi]
 gi|193903067|gb|EDW01934.1| GH21711 [Drosophila grimshawi]
          Length = 1053

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 98/300 (32%), Gaps = 25/300 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +             GY  L   L++    ++  A + +    Q           L 
Sbjct: 130 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMEAAVQAYITALQYNPDLYCVRSDLG 187

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 188 NLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 242

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 243 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 298

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTH 301
             +      +++L  N   A    A +L  + + ++AE       ++ + H +  N   +
Sbjct: 299 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLAN 358

Query: 302 LLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +  E        +L     LE    +   +   ++ +  + G + +A      A++I P 
Sbjct: 359 IKREQGFIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT 416



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P+ P     +  
Sbjct: 265 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 324

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       N A  L   +    ++G +  +    +++L++ 
Sbjct: 325 ALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKREQGFIEEATRLYLKALEVF 380

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
            +   A    A  L  Q K ++A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 381 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 438

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 439 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAILSYRTALKLKPD 484



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 330 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 387

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I P        +       ++ S A+    +  + 
Sbjct: 388 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 447

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 448 NPAF----ADAHSNLASIHKDSGNIPEAILSYRTALKLKPDFPDAYCNLAHCL 496


>gi|58584117|ref|YP_203133.1| hypothetical protein XOO4494 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428711|gb|AAW77748.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 690

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A +    +PD       +        +   A+  ++       E 
Sbjct: 6   LQALRRNAADDAVALAREWATAAPDDVAAHRWLAVALQQQGQPGLALGSIDTALMLTPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      +  L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +    +   L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLVPEHPQLLAVDGVVEMRRSQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 182 EHFAFAERAFERVIELNP 199



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 14/280 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           +       +  ++LL     LA R  + A   L     +   +  A       +   GDL
Sbjct: 57  TALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDL 116

Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + A+R +  A  + P+ P     + VV+      +  RA++ L +  +   +     A +
Sbjct: 117 DEAERLSRTAARLVPEHPQLLAVDGVVEMRRSQSD--RALSLLTRAAEQLPD----DARV 170

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284
           L +       K     +       ++L           A+    Q +   A      +LE
Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +     P          L +                      +L  +    + +G++D A
Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWVRLGAVDDA 290

Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
                 A+  +       L  LA            I  W 
Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330


>gi|297568709|ref|YP_003690053.1| Methyltransferase type 12 [Desulfurivibrio alkaliphilus AHT2]
 gi|296924624|gb|ADH85434.1| Methyltransferase type 12 [Desulfurivibrio alkaliphilus AHT2]
          Length = 469

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 53/169 (31%), Gaps = 4/169 (2%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL    A  +  +  A +    +L+       A  +L       G+ +  +R   +   
Sbjct: 14  KLLAAAEAQEQGDFQRAKDLYRDILKNCPDHLDARVALCLLYQVAGEADKGRRCFAETRR 73

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P    +   +        E   AI F  Q      E +R    L  AR      +G+ 
Sbjct: 74  LAPPHADLHLQLGTLCHDRGEDELAIDFYRQALALKPEHHRAWYNLGTAR----LQRGEE 129

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +     E+L L  N +      A +L    K   A  I  +     P
Sbjct: 130 ALAVEAYQEALHLAPNDVDTLYNLALALTRLEKFSAAAHIYHRALAAAP 178


>gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
          Length = 462

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 15/231 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
              Y  A       +++       +          ++ D   A     KA++I+P     
Sbjct: 160 SGDYQGAIADYNKSIEVNPQYADAYNNRG--RAKYKLKDTQGAIDDFNKAIEINPQLAIA 217

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                      K++  AI+  N+  +         A     R     +  D   +  D  
Sbjct: 218 YSNRGNAKDELKDYQGAISDFNKAIEIIP----QDAAAYYNRGNAKDELKDYQGAISDFN 273

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSE 305
           +++++      A              ++A     K  ++N  P++A  Y         S 
Sbjct: 274 KAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEIN--PQLAIAYSNRGIVKRESG 331

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +T   +    R  EIN E   +          +G+  +A A    A++I P
Sbjct: 332 DTQEAIADFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADYNKAIEINP 382



 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 6/166 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y  A       ++I      A Y+        GD   A     KA++I+P        
Sbjct: 263 KDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLAIAYSN 322

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  + +   AI   N+  +   E+    A     R +   + G+   +  D  +++
Sbjct: 323 RGIVKRESGDTQEAIADFNRAIEINPEY----AAAYNNRGIAKKNLGNYQEAIADYNKAI 378

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           ++      A      +       + A   L K  ++N  P+ A  Y
Sbjct: 379 EINPQYAAAYYNRGIAKYKLKDTQGAIAELNKAIEIN--PQYAAAY 422



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     + GD   A     KA++I+P               + +   AI   N+  + 
Sbjct: 85  RGLA--KRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEI 142

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             ++    A     R       GD   +  D  +S+++      A     ++       +
Sbjct: 143 NPQY----ADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQ 198

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-------RALRLEEINKESVESLVI 330
            A     K  ++N  P++A  Y++    N   +LK          +  EI  +   +   
Sbjct: 199 GAIDDFNKAIEIN--PQLAIAYSN--RGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYN 254

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
                 E+     A +    A++I P+         I +  S +T + +     A+ 
Sbjct: 255 RGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIE 311


>gi|82702040|ref|YP_411606.1| tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
 gi|82410105|gb|ABB74214.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
          Length = 875

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 86/293 (29%), Gaps = 16/293 (5%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALA---ERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R   +  +      +     L  +Q A+        + A    + +LQ+      A++ L
Sbjct: 24  RNAEANPAASLADTSPRQSILQYLQAAVEHHKRGNLSQAEAIYQHILQLDPNHPDALHFL 83

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +   G ++       +AL   P+       +        + + AI       K    
Sbjct: 84  GLLARDAGRIDIGIELIKRALRFKPNYVEAHNNLGNTLRQQGKLNDAIASYRTAVKLEPR 143

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +    A   +  +L   ++G +  +  +  ++L +                 Q     A 
Sbjct: 144 F--AEAYGNLGNAL--REQGRLDDAMINYRKALGIQPQLAEMHCNIGIVHREQGDLENAV 199

Query: 281 VILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
               K   +   P+ A  + +L             +    +      +  E+   +    
Sbjct: 200 SSFRKALLLK--PDSAEAFNNLGNVLVEQGKFEEAVSSFGKAILYKPQFPEAFNNLGNAL 257

Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS-HNTDKILYWTQSAL 386
            E+G +D+A      A+++ P     +   A +       +   I YW    L
Sbjct: 258 RELGRLDEAAVAYGRAIELNPGYARAYSNRAYVLWQQHKADNAVIDYWDALEL 310


>gi|289669851|ref|ZP_06490926.1| hypothetical protein XcampmN_15482 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 268

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A +    +PD       +        + +RA+  ++       E 
Sbjct: 6   LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPARALDSIDTALMLTPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      +  L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +    +   L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 182 EHFAFAERAFERVIELNP 199



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 8/182 (4%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              AR + S  +       +  ++LL     LA R  + A   L     +   +  A   
Sbjct: 46  GQPARALDSIDTALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVM 105

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217
               +   GDL+ A+R +  A  ++P+ P     + VV+      +  RA++ L +  + 
Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLALDGVVEMRRGQSD--RALSLLTRAAEQ 163

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +     A +L +       K     +       ++L    I      A+    Q +  
Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGIALRAFIAQLAQRQGRLD 219

Query: 278 KA 279
            A
Sbjct: 220 DA 221



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 7/163 (4%)

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291
           L+   +     +   A E      + + A    A +L  Q +  +A   ++    + P  
Sbjct: 6   LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPARALDSIDTALMLTPED 65

Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
              H   A         +         R   ++     + V+ + +A+  G +D+A   +
Sbjct: 66  ADLHLLRAGALLATRDLSAAD--AALSRTTALDPNQFNAYVMQAHLAVARGDLDEAERLS 123

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A ++AP     L L  + +     +D+ L     A   +PD
Sbjct: 124 RTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPD 166


>gi|73992767|ref|XP_534481.2| PREDICTED: similar to U5 snRNP-associated 102 kDa protein [Canis
           familiaris]
          Length = 1000

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 638 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 695

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 696 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 755

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 +  M  +     + LK C +S    +  ++     
Sbjct: 756 LCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKV 815

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S V+ 
Sbjct: 816 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 873

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 874 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 931

Query: 391 D 391
           D
Sbjct: 932 D 932



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 347 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 403

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 404 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 455

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 456 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 508

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 509 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 554


>gi|322421648|ref|YP_004200871.1| glycosyl transferase family 9 [Geobacter sp. M18]
 gi|320128035|gb|ADW15595.1| glycosyl transferase family 9 [Geobacter sp. M18]
          Length = 991

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 62/234 (26%), Gaps = 37/234 (15%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSA 173
              ++  +   E      E     A      +L   P + E    +L       G    A
Sbjct: 516 AAQDDPNLLFREANRLRVEGDLAGAVRLYRTLLIRLPESAEV-HNNLGLALQDQGLAADA 574

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           +    +AL++ P        +    V   E   A     +  + A +     A + +   
Sbjct: 575 EASFRRALELKPGLADAYNNLGTLLVSRGEHEAAEPQFRRAIELAPDC--LPAYVNLGSC 632

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L+  ++     +      ++ L  +        A+                         
Sbjct: 633 LQVLEE--PAQAVELYRHAIDLNPD-----YLEARI------------------------ 661

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            +   Y  L+       ++    L  +  E  E    ++   L +G  ++   +
Sbjct: 662 NLGTAYQDLMQ--PQKAIETYEELLRLAPEHPEGHWNLALSLLSVGEFERGWRE 713



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 8/148 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           AL E +   A E  + +LQ    +     +  +   +   G+L  A    ++A+ + P  
Sbjct: 11  ALEENRVERARELCQALLQSEPDSVDLLTLSGVL--ARLTGELEVALHSLSRAVALDPSQ 68

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             +   +            A     +  +  K +    A+  +  +L     G    +  
Sbjct: 69  AELHNNLGVILEDLGRHEEAAACYRRALEKRKLYP--EALGNLGNALLKL--GHPQEAIA 124

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNK 275
              +++ L      A      +L  Q +
Sbjct: 125 RFCDAIALDPGYTNAYYHLGHALRGQGE 152



 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 66/216 (30%), Gaps = 49/216 (22%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA------------KEWNRNR------ 225
            PD+PW     + +     EW   I  + ++                +E NR R      
Sbjct: 479 RPDSPWYPSVRLHRQEATGEWEPVIAAIAREIVPPSGAAQDDPNLLFREANRLRVEGDLA 538

Query: 226 ----------------AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                           A +     L   D+G    +      +L+L      A       
Sbjct: 539 GAVRLYRTLLIRLPESAEVHNNLGLALQDQGLAADAEASFRRALELKPGLADAYNNLGTL 598

Query: 270 LISQNKKRKAE----VILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEI 320
           L+S+ +   AE      +E        P+    Y +L S     E     ++      ++
Sbjct: 599 LVSRGEHEAAEPQFRRAIELA------PDCLPAYVNLGSCLQVLEEPAQAVELYRHAIDL 652

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           N + +E+ + +     ++    +A       +++AP
Sbjct: 653 NPDYLEARINLGTAYQDLMQPQKAIETYEELLRLAP 688


>gi|188997334|ref|YP_001931585.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932401|gb|ACD67031.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 668

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 31/230 (13%)

Query: 165 CRIGDLNSAQRYATKALDIS-----------------PDAPWVTEAVVQQYVLAKEWSRA 207
             I D + A      A   S                 P        +   Y L  E+ +A
Sbjct: 104 LAIKDYDKAIHLLEIAAKESKENPSEPLWQGFYSRFVPKKSEALSLLGSAYYLKGEYQKA 163

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  LN+  K   + N +     +A S     +     +   A  +++L   +        
Sbjct: 164 VEALNESIK--LDPNLSDPFFFLAMSYGKLKE--YGKAVEAAKRAIELDPKAPTYYAVLG 219

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322
                Q K ++AE  L+K  +++P        +A++Y     E+    +    ++ EIN 
Sbjct: 220 LIYKDQKKYKEAEENLKKSIELDPKSIVSYLKLADLYYE--KESYKEAVNTLTKVLEINP 277

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
            ++E+   +    + MG  D+A   A  A+K         +  +I++A  
Sbjct: 278 SNMEANYSLIYTYMAMGQFDKAIESANKAIK-HNTITEAGI--RIKKAEG 324


>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
 gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
          Length = 400

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 105/291 (36%), Gaps = 28/291 (9%)

Query: 118 NEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           +   +YLL  + A  E   ++  A +  +  ++I +       ++ F   ++G+   A  
Sbjct: 83  DPKNIYLLNNKAAALESFGRFEEALKLYQKAVEINSEDADLWNNMAFSYSQVGEYERAVE 142

Query: 176 YATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
              KAL++ PD P  W  +A+      A  +  A+    +  + + ++    A     + 
Sbjct: 143 AYGKALELRPDYPNAWYGKAL--NLSQAGSYEEAVEAYEKVLEESPDYKEAWA----GKG 196

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +     G    +     +++++    + A       L S    R+A    EK  +++P  
Sbjct: 197 IALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELDPEN 256

Query: 294 EIA--NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           + A  N+   L + E     +    +   IN E+ +          +M   ++A      
Sbjct: 257 DDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYRK 316

Query: 351 AMKIAP-----RKEIFLLLAQI----------EQANSHNTDKILYWTQSAL 386
           A ++ P        +  +LAQ+          E+A   +      W   A+
Sbjct: 317 ATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGAADSWFGKAV 367


>gi|84625891|ref|YP_453263.1| hypothetical protein XOO_4234 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188574553|ref|YP_001911482.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|84369831|dbj|BAE70989.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519005|gb|ACD56950.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 690

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A +    +PD       +        +   A+  ++       E 
Sbjct: 6   LQALRRNAADDAVALAREWATAAPDDVAAHRWLAVALQQQGQPGLALGSIDTALMLTPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      +  L  N   A +  A   +++    +AE 
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +    +   L    R  E   +    L  +    L+ 
Sbjct: 122 LSRTAARLVPEHPQLLAVDGVVEMRRSQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 182 EHFAFAERAFERVIELNP 199



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 14/280 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           +       +  ++LL     LA R  + A   L     +   +  A       +   GDL
Sbjct: 57  TALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDL 116

Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + A+R +  A  + P+ P     + VV+      +  RA++ L +  +   +     A +
Sbjct: 117 DEAERLSRTAARLVPEHPQLLAVDGVVEMRRSQSD--RALSLLTRAAEQLPD----DARV 170

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284
           L +       K     +       ++L           A+    Q +   A      +LE
Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +     P          L +                      +L  +    + +G++D A
Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWVRLGAVDDA 290

Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
                 A+  +       L  LA            I  W 
Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330


>gi|166710157|ref|ZP_02241364.1| hypothetical protein Xoryp_01410 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 695

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 60/203 (29%), Gaps = 12/203 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A +     PD       +        +   A+  ++       E 
Sbjct: 6   LQALRRNAADDAVALAREWATAVPDDVAAHRWLAVALQQQGQPGLALDSIDTALMLTPE- 64

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      +  L  N   A +  A   +++    +A  
Sbjct: 65  ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAAR 121

Query: 282 ILEKIWKVNP------HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           +     ++ P      HP++  +     +    +   L    R  E   +    L  +  
Sbjct: 122 LSRTAARLAPEHPQLEHPQLLAVDGVVEMRRGQSDRALSLLTRAAEQLPDDARVLFSLGF 181

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
             L+      A       +++ P
Sbjct: 182 AYLQKEHFAFAERAFERVIELNP 204



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 80/285 (28%), Gaps = 19/285 (6%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           +       +  ++LL     LA R  + A   L     +   +  A       +   GDL
Sbjct: 57  TALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDL 116

Query: 171 NSAQRYATKALDISPDAPW-------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + A R +  A  ++P+ P          + VV+      +  RA++ L +  +   +   
Sbjct: 117 DEAARLSRTAARLAPEHPQLEHPQLLAVDGVVEMRRGQSD--RALSLLTRAAEQLPD--- 171

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-- 281
             A +L +       K     +       ++L           A+    Q +   A    
Sbjct: 172 -DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAM 230

Query: 282 --ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +LE+     P          L +                      +L  +      +G
Sbjct: 231 QGVLEQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLG 290

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
           ++D A      A+  +       L  LA            I  W 
Sbjct: 291 AVDDARDTLDAALATSATAHDLWLARLAVEPVGGLQAQAVIERWL 335


>gi|108761475|ref|YP_630180.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108465355|gb|ABF90540.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
            [Myxococcus xanthus DK 1622]
          Length = 1628

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 12/235 (5%)

Query: 130  ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            ALAE    +A ++ E  +++      A   L   +    DL +A+  A +AL++ P    
Sbjct: 1283 ALAENNTLLAQQEFERSVKLDPILADAHLGLSRVALLTDDLETAKAEANRALELDPHL-- 1340

Query: 190  VTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            + +  +Q+        +   A+  L + K       R+  I +   ++   ++GD+  + 
Sbjct: 1341 LKDGRLQRGLVLWRLGQLEEAVAELEKAKAEDP---RSTTIPITLGAV-LLERGDLPGAE 1396

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSE 305
             +   +L    ++  A    A     + +  +A   + K  +  P+ P+    Y  +L +
Sbjct: 1397 SNLGLALSNEPSNHEALYYLALVKARRLEFTQALDNMRKAVERAPNRPDYHYAYGVILRD 1456

Query: 306  --NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              N    +    +  E++    ++   +    LE G  D+A A    ++K  PR+
Sbjct: 1457 AKNLPDAMSAWRKTVELDGSHADAHEALGHALLEGGQFDEAIASFEASLKADPRR 1511



 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 89/283 (31%), Gaps = 31/283 (10%)

Query: 82   DKGYKALYTGL---MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
             KG +A+   L   +  A     LAR            H        E +  L       
Sbjct: 1079 AKGTEAVERALAEDVQSALGPAELARARGLKGVAMFQKHQPK-----EAEAELKAALEMD 1133

Query: 139  AHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A                 +   L        +   A           P+     +  +  
Sbjct: 1134 AKSTF-------------LRGQLARVLRAQRNFEGALPIYKALATEEPNNLEFADGHITA 1180

Query: 198  YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMIASYHDAIESLKLC 256
             V+  +   A+  +  KK N    N  R   L  R  +  D   D    Y  AI +    
Sbjct: 1181 LVMTGKMQDALEAV--KKANGVFPNEARIAYLYGRIEDALDNLSDTEGHYKRAIAA---D 1235

Query: 257  DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKR 313
            D  + A +   +  ++Q +  +A   LE+  K  P             L   NT+   + 
Sbjct: 1236 DTLVEARLYLGRFYLAQRRNAEARPQLEEAAKKAPENAGVRAGLGELALAENNTLLAQQE 1295

Query: 314  ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              R  +++    ++ + +S++AL    ++ A A+A  A+++ P
Sbjct: 1296 FERSVKLDPILADAHLGLSRVALLTDDLETAKAEANRALELDP 1338



 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 88   LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEM 145
            +  G + +   ++P A             ++E L YL  ++ +     +  +   + +E 
Sbjct: 1380 ITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYLALVKARRLEFTQALDNMRKAVER 1439

Query: 146  MLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
                P       Y  +  ++  + D  SA     K +++        EA+    +   ++
Sbjct: 1440 APNRPDYHYA--YGVILRDAKNLPDAMSAW---RKTVELDGSHADAHEALGHALLEGGQF 1494

Query: 205  SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
              AI       K      R    +L +             +      +LK          
Sbjct: 1495 DEAIASFEASLKADPRRTR----VLGSIGDAYFAAARWNDAIKRYQSALKADPKLTYVYY 1550

Query: 265  CAAKSLISQNKKRKA 279
              A++   Q +  KA
Sbjct: 1551 KVARAFTEQAQHAKA 1565


>gi|311279809|ref|YP_003942040.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter
           cloacae SCF1]
 gi|308749004|gb|ADO48756.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter
           cloacae SCF1]
          Length = 389

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 95/280 (33%), Gaps = 53/280 (18%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +    ++    T   
Sbjct: 83  GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLV--DETDF- 139

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                     RIG                       + ++Q Y    +W +AI    +  
Sbjct: 140 ----------RIG---------------------ALQQLLQIYQATSDWQKAIEVAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE +R   A      +L+     DM  +     +      NS   SI   + L++Q 
Sbjct: 169 KLGKEKHRPEIAHFWCELALQQMGNNDMDKAISLLKKGAAADRNSARISIMMGRVLMAQG 228

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKESV 325
           +  KA   L+++  +    E+ +    +          ++     L+RA    E N  + 
Sbjct: 229 EYDKAVESLQRV--IEQDRELVSETLEMLQTCYQQLGKNDEWAAFLRRA---VEENTGAT 283

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
            + +++++I  +   ++ A       ++  P   +F  L+
Sbjct: 284 -AELMLAQILEQQEGVESAQTYVTRQLQRHPTMRVFHKLM 322


>gi|195170683|ref|XP_002026141.1| GL16176 [Drosophila persimilis]
 gi|194111021|gb|EDW33064.1| GL16176 [Drosophila persimilis]
          Length = 1180

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 95/296 (32%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S++     K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   + +E+ + +++I LE   +  + A    A KI   K  + + A+I
Sbjct: 399 THLKKVTEQFPDDIEAWIELAQI-LEQNDLAASLAAYGTASKILKDKAKYEIPAEI 453


>gi|124024110|ref|YP_001018417.1| hypothetical protein P9303_24191 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964396|gb|ABM79152.1| Hypothetical protein P9303_24191 [Prochlorococcus marinus str. MIT
           9303]
          Length = 545

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 56/184 (30%), Gaps = 16/184 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR 153
             +  A ++     ++   +      L   +I     Q+  A    +  L+     P T 
Sbjct: 48  GQLQQAVELIQASIREDESNPIPFFNL--GKILAIAGQHENAVGVFQESLKRNQQIPETW 105

Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                  +  + R  G    A+R    AL ++P        +        E   A   L 
Sbjct: 106 FC-----FANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR 160

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +   +  E        L+   +   ++G+   +     +++++  + + A +     L  
Sbjct: 161 RALASNPE----DINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKD 216

Query: 273 QNKK 276
             + 
Sbjct: 217 VGRM 220



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 5/164 (3%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q     R  + A    + +L +      A++ L       G L  A      ++      
Sbjct: 9   QAYQ-GRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESN 67

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P     + +   +A +   A+    +  K  ++          A +L   + G    +  
Sbjct: 68  PIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIP--ETWFCFANAL--REIGKTEEAKR 123

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               +L+L      A+      L    +  +AE +L +    NP
Sbjct: 124 AYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNP 167


>gi|330899588|gb|EGH31007.1| peptidase aspartic, active site [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 654

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 99/335 (29%), Gaps = 52/335 (15%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQ---QHTFHNEYLVY---LLE 126
           +K     GY      L + A H+       ARK  +   +         E L     L E
Sbjct: 91  YKTRPKPGYLEGNQALRAYARHDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDE 150

Query: 127 VQIALAERQYNIA----------HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            Q A+       A           + ++  + +              +   GD ++A   
Sbjct: 151 AQAAI--NDAEQALGPQQVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDNDTAVSE 202

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A +A+   P      + +V   +   +++ A +   +        N N A LL+ R    
Sbjct: 203 AREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMR 258

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHP 293
              GD   +  D  ++  +   ++      A    +  +  +A   L++        P  
Sbjct: 259 QRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRLQQARDAGQLQPGD 315

Query: 294 EIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHA 346
           E+   Y    + +    +   KR  R   +      ++  S +  S  A  +    +   
Sbjct: 316 EVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLD 375

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
                    P +++F             +D    W
Sbjct: 376 YQQTGDLQMPAQQVF-------DTRRAVSDLSREW 403



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L    +L                 TG  ++A  +   A        +       Y   L+
Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
              IA    QY  A         +    AT          +  R+GD + A++   +A+ 
Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234
           +  + P   +A +  Y    + S A+  L Q +   +         A  L        +L
Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGQLQPGDEVQIAYFLSQAGDDQGAL 333

Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264
           +   + D             A  +++  +++   + 
Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369


>gi|239947347|ref|ZP_04699100.1| tetratricopeptide repeat family protein [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|239921623|gb|EER21647.1| tetratricopeptide repeat family protein [Rickettsia endosymbiont of
           Ixodes scapularis]
          Length = 323

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 100/302 (33%), Gaps = 24/302 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M RL+       L+   F ++  +   V I+  +     + F  L +    L +  ++  
Sbjct: 1   MFRLLLICATFLLLYFGFTLIESFDSKVFISLYDYNIEITLFFSLILGLLLLISCFIIIR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116
                +  P+ + ++ +KR  +    AL   +++ A     +    A  +   +S +   
Sbjct: 61  FLILIIDLPSKIHNIFNKRKINHDRYAL---ILAFAEYIMNNKAKSASIVRKNLSSEDLK 117

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++    L+           +      + ++       +   +L            A+ Y
Sbjct: 118 DSQEFHNLILAITEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSLYEKAENY 174

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235
           ATKA + +         +++ Y     W++ I   N+  K +  E     A   +  + +
Sbjct: 175 ATKAYNFNELDSDNLITLMRCYAKLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234

Query: 236 NADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWKV 289
             +  +   +      A++     D  +       +   + N K    K   IL+  + +
Sbjct: 235 EVEGNNTANAIDYLETAVDLNFYNDELL-------EFYFNLNDKLNVNKKIKILKDAFCI 287

Query: 290 NP 291
            P
Sbjct: 288 IP 289


>gi|242065108|ref|XP_002453843.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
 gi|241933674|gb|EES06819.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
          Length = 1011

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 75/243 (30%), Gaps = 20/243 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181
            LL               +  E +   P  +    Y     +    GD++ A RY   A+
Sbjct: 125 LLLGAIYYQIRNYDMCIAKNEEALAIDP--QFAECYGNMANAWKEKGDIDLAIRYYLTAI 182

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P+       +   Y      + A     Q                         +G 
Sbjct: 183 QLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINP----RLVDAHSNLGNLMKAQGF 238

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +Y   IE+L++  +  +A    A   +      KA +  ++  K+   P  A+ Y +
Sbjct: 239 IQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLK--PSFADAYLN 296

Query: 302 --------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                    + ++ +   +RA    +   +   +   ++ I  E G +D A      A+ 
Sbjct: 297 QGNVYKALGMPQDAIMCYQRA---LQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 353

Query: 354 IAP 356
             P
Sbjct: 354 YDP 356



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 57/188 (30%), Gaps = 18/188 (9%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP--A 151
             +  A +          +    +  L  L++ Q          A+    E +   P  A
Sbjct: 203 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYSCYIEALRIDPHFA 257

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                +  L+ E+   GDL+ A  Y  +A+ + P            Y        AI   
Sbjct: 258 IAWSNLAGLFMEA---GDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCY 314

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +   ++    A+     +    ++G +  +     +++      + A      +L 
Sbjct: 315 QRALQARPDY----AMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNNMGNALK 370

Query: 272 SQNKKRKA 279
              +  +A
Sbjct: 371 DAGRVEEA 378


>gi|240281542|gb|EER45045.1| DnaJ domain-containing protein [Ajellomyces capsulatus H143]
          Length = 730

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%)

Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+ V+  L          A   +  ML+          +          G+   A ++ 
Sbjct: 395 RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 452

Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225
             AL + PD+          + +++          ++++  AI    +  +   +     
Sbjct: 453 KLALSLDPDSAQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 512

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + LL  R+    +      +  D   +LKL    + A    AK+  +     +A    +K
Sbjct: 513 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 572

Query: 286 IWKVNP 291
           I + NP
Sbjct: 573 IAEANP 578


>gi|19264088|gb|AAH25030.1| Prpf6 protein [Mus musculus]
          Length = 570

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 88/229 (38%), Gaps = 26/229 (11%)

Query: 167 IGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
           I D+  A+       + +P  P  W+  A +++  +  +   A   +    K  +   ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEE--VTGKLQVARNLI---MKGTEMCPKS 342

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             + L A  L+  D    + +     ++++    S+   I AA+        R  + +L 
Sbjct: 343 EDVWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLR 394

Query: 285 KIWKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K  +  P+   +      L   E+    L RA    E    SVE  + ++++     + +
Sbjct: 395 KALEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYE 447

Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            A      A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 448 NARKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|56751829|ref|YP_172530.1| hypothetical protein syc1820_d [Synechococcus elongatus PCC 6301]
 gi|81301089|ref|YP_401297.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
 gi|56686788|dbj|BAD80010.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169970|gb|ABB58310.1| TPR repeat [Synechococcus elongatus PCC 7942]
          Length = 310

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 12/162 (7%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                +    +L  Q          A +    +L+   T   A+              +A
Sbjct: 130 RLQPQQPAYRVLLAQTQAQLGDREAAAQTYRQILETAPTNLEALRGFTQLLLTQKQPTAA 189

Query: 174 QRYATKAL---DISPDAPWVTEAVV-QQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAIL 228
                KA     I+P      + ++ Q Y    +   AI   ++  + N +++    A  
Sbjct: 190 VDLLQKARQTDKITPADQVSIDLMLAQVYANQGQIDDAIALYDRSAQNNGRDFRPLLAKA 249

Query: 229 LIARSLENADKGDMIASYHDAI-------ESLKLCDNSIMAS 263
           L+ +   +  K   I     AI       +  +L   S+ A+
Sbjct: 250 LLLKQQGDLQKATPIFQEAIAIAPAQYRDQIRQLSPASMPAT 291


>gi|296446900|ref|ZP_06888836.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
 gi|296255575|gb|EFH02666.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
          Length = 346

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 60/173 (34%), Gaps = 6/173 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                 +    + A    +  LQ+      A+ +        GDL+ A      A+ + P
Sbjct: 159 RADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHALADFDAAVKLEP 218

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            +          Y    +   A+   +         +  +A+    R L    KGD   +
Sbjct: 219 KSARALLDRAAFYQAKGDLDHALADYDAAIAR----DGKQAVSYNNRGLALHAKGDYDKA 274

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             D  ++++L      A +  A +L  +++   A+  LE+  +++  P +A  
Sbjct: 275 LADFSKAIELDPKYARAYLNRANALRGKHELEPAKADLEQALRLD--PNLAAA 325


>gi|213967147|ref|ZP_03395296.1| hypothetical protein PSPTOT1_1843 [Pseudomonas syringae pv. tomato
           T1]
 gi|301381119|ref|ZP_07229537.1| hypothetical protein PsyrptM_00719 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060543|ref|ZP_07252084.1| hypothetical protein PsyrptK_11190 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133188|ref|ZP_07259178.1| hypothetical protein PsyrptN_17449 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213927989|gb|EEB61535.1| hypothetical protein PSPTOT1_1843 [Pseudomonas syringae pv. tomato
           T1]
          Length = 654

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 24/228 (10%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD  +A   A  A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL  R       GD   +  D  ++  L   ++      A    +  + ++A   L
Sbjct: 246 NDATLLAQRGQLRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPKEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVESLVIVSK 333
           +K        P  E+   Y    + +  G L   KR  R   +      ++  S +  S 
Sbjct: 303 QKARDAGQLQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYSAMRSSD 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
            A  +    +            P +++F             +D    W
Sbjct: 363 DAQAITYFKRVLDYQQTGDLQMPDQQVF-------DTRRAVSDLSREW 403



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 41/248 (16%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--- 220
           +    D + A   A +AL    DA  + + +            A+   ++ +++  +   
Sbjct: 44  AYNRKDYDLAIAKAREALRQRGDAEQLHDLI------------ALAERDKYRRDHPQQFP 91

Query: 221 -WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                   +   ++L    + D   S + A +++     ++   +   ++L  Q +  +A
Sbjct: 92  KARVKPGYVEGNQALRAYARRDYDGSANHARKAIAQAPKNLDYRMMLIEALQRQQRLDQA 151

Query: 280 EVILEKIWKV-NPHPEI----------------ANIYTHLLSENTVGKLKRALRLEEINK 322
           +V +    +   P P +                A  Y  L   +    +  A        
Sbjct: 152 QVAINDAEQAVGPQPVLTRRRQAIQEQVAVNKAAAGYKALARGDNETAVSEARDAVRSFP 211

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN----SHNTDKI 378
           + +    ++    +  G   +A + A  A+ +        LLAQ  +        + D  
Sbjct: 212 KQMAYRKLLVSALIAQGQYAEARSAATEALALNGND--ATLLAQ--RGQLRQRLGDQDGA 267

Query: 379 LYWTQSAL 386
                 AL
Sbjct: 268 RQDFAQAL 275


>gi|304386520|ref|ZP_07368808.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC
           13091]
 gi|304339349|gb|EFM05421.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC
           13091]
          Length = 402

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 112/356 (31%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   + QQ   ++  L      ++     + + A      ML  P T       
Sbjct: 70  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 181

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +  A+      A+E+ K C            
Sbjct: 182 RLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIEH 241

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 292 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395


>gi|209524105|ref|ZP_03272656.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209495480|gb|EDZ95784.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 1676

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 17/202 (8%)

Query: 171  NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            + A     KA+ ++P    +   +   Y   + W +A+    +                 
Sbjct: 961  SEAVAAFEKAVQLNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNL----VAAHR 1016

Query: 231  ARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILEKIWK 288
                     G    +     ++L L  +   AS  +    SL+   + ++AEV   ++ +
Sbjct: 1017 NLGKVWQKLGQPQQALSCRYQALILQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVR 1076

Query: 289  VNPHPEIANIYTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             +PH      Y +L    +   L         R  E+  +S ES   + +  +     D 
Sbjct: 1077 RSPHDS--QAYHNLGEVLSAQGLWSQAEAAYRRAVELQPDSFESRNSLGQALVAQEKWDD 1134

Query: 344  AHAKAMLAMKIAPRKEIFLLLA 365
            A A    A++  PR    LL+A
Sbjct: 1135 AIACYGRALEQNPR----LLMA 1152



 Score = 39.9 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 66/202 (32%), Gaps = 15/202 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L   L+     +    R + +++       +  ++     +    +  +  A E  + +L
Sbjct: 157 LGRSLLGKQDGD----RAIAAFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALECFQKVL 212

Query: 148 QIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +       ++S L +    + D   A  +  +A+              +   +      
Sbjct: 213 SLAP-EFPGIHSDLAWSLMELADFPEAIAHLKEAIKGQEFLLTAYITQSENQSVDGSLGE 271

Query: 207 A-------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
           A       +  LNQ   +       +    + ++L  A+  +  A+     ++LKL  + 
Sbjct: 272 AQKACAQLLQALNQNDISVSVIKLAQTYFHLGQAL--AEYQNFGAAEQYYQKTLKLQPDF 329

Query: 260 IMASICAAKSLISQNKKRKAEV 281
             A +     L  Q + ++A+ 
Sbjct: 330 TGAHLAWGDILREQGRIKEAQK 351



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 92/289 (31%), Gaps = 27/289 (9%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                 A               E   +L      L   +   A      +++       A 
Sbjct: 1026 GQPQQALSCRYQALILQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAY 1085

Query: 158  YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            ++L       G  + A+    +A+++ PD+     ++ Q  V  ++W  AI    +  + 
Sbjct: 1086 HNLGEVLSAQGLWSQAEAAYRRAVELQPDSFESRNSLGQALVAQEKWDDAIACYGRALEQ 1145

Query: 218  AKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIM-------------AS 263
                    A+  ++++L +++K          ++ + +     +               +
Sbjct: 1146 NP--RLLMALENLSKALRHSNKTLPPSQGRWLSLIAGRQIPEELPPPGGGAFAPPDVDVA 1203

Query: 264  ICAAKSLISQNK--KRKAEVILEKIWKVNPHPEIANIYT----HLLSENTVGKLKR-ALR 316
            +  A  L  Q +      +      W+    P  A  Y+     L+     GK  R   +
Sbjct: 1204 LERATELYQQKRYQACVQQCQQVVQWR----PREARAYSLWGKALVGLAAYGKALRCYQQ 1259

Query: 317  LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
               +  ++      + ++ L++    +A      A+K+ P   I+  LA
Sbjct: 1260 AIALEPKNGLWHQELGELCLQVRRYPEAIVSLQEAVKLKPHPRIYRSLA 1308


>gi|220915573|ref|YP_002490877.1| MJ0042 family finger-like protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953427|gb|ACL63811.1| MJ0042 family finger-like protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 1163

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 84/280 (30%), Gaps = 22/280 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  ++A  +   A      +          +      + AL   + + A   LE +    
Sbjct: 535 GEAALARGDAVKAAAAFQRLGGLEQGPRAPMGL---ARAALLRGKPDEARPTLEKLAAAD 591

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           A    A   L   +   GD+  A+ +      ++P      +  +      +        
Sbjct: 592 AAYLPARLELAVLAEAAGDVGGARTH------LAPVLADAAQPRLAPLERGRARMVEAAL 645

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--- 267
           L++    A +  +     L A     A +  ++       ++      S   +  AA   
Sbjct: 646 LDRSAATAADAEKALLAALDADPRLAAARAALVRQRLRRGDAAGAVAASDPVAAEAASDP 705

Query: 268 -------KSLISQNKKRKAEVILEKIWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRL 317
                  ++L    +   A  + ++  +  P  P +  A       +             
Sbjct: 706 ELAAARVRALALAGRALDAAQLADQALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEA 765

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              + E+VE  V + ++AL  G +  A      A++  PR
Sbjct: 766 LARDAEAVEPRVALGRLALARGDLPAAREALAQAVEKGPR 805



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 7/248 (2%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                     + + +     A  +   A       L   A       +L   +   GDL 
Sbjct: 731 ALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEALARDAEAVEPRVALGRLALARGDLP 790

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A+    +A++  P  P    A+ +                   + A   +   A  ++ 
Sbjct: 791 AAREALAQAVEKGPRDPAAHAALGELRAAD----GDAAGAEAAYRAALALDAEHAAAVLG 846

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +     +GD+ A+    + +L L   S  A +       S     KAE  L     + P
Sbjct: 847 LARLAQARGDVAAARDGLVRALALEPRSAEAQLALGTLEWSARDLAKAEAALAIAVDLQP 906

Query: 292 HPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               A        L   +    +K           + E+ +   +  L  G    A  + 
Sbjct: 907 RNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRALLARGETPAALVRL 966

Query: 349 MLAMKIAP 356
             A++++P
Sbjct: 967 RKAVELSP 974



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 6/201 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +++A  ++P AR   +          +   +    ++  A+     A       L + 
Sbjct: 780 GRLALARGDLPAAR--EALAQAVEKGPRDPAAHAALGELRAADGDAAGAEAAYRAALALD 837

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           A    AV  L   +   GD+ +A+    +AL + P +     A+      A++    +  
Sbjct: 838 AEHAAAVLGLARLAQARGDVAAARDGLVRALALEPRSAEAQLALGTLEWSARD----LAK 893

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                  A +     A  L        ++GD  A+      +      +  A +   ++L
Sbjct: 894 AEAALAIAVDLQPRNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRAL 953

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
           +++ +   A V L K  +++P
Sbjct: 954 LARGETPAALVRLRKAVELSP 974


>gi|186475087|ref|YP_001856557.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184191546|gb|ACC69511.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum
           STM815]
          Length = 613

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 103/305 (33%), Gaps = 49/305 (16%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180
            +L  ++AL   Q   A++    + +       A  +  +   +    D  +A +   + 
Sbjct: 87  QVLAAEVALQRNQPAPAYQTYLSLARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQE- 145

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI---------- 230
              +P +    +      VL+ +   A   L ++       NR   IL +          
Sbjct: 146 --YAPQSERAAQLDASLLVLSGKPDDAKPMLAKELAKIPPENRGNGILALQLLISRGPNR 203

Query: 231 ----------------------ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                                 A + +     D   +     ++LKL  + + A++  ++
Sbjct: 204 VGGLHVLQDLLANDMNRPEAQFAIARQQLIADDAPGARKSLEQALKLKPDYLPAALMLSQ 263

Query: 269 SLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRLEEINKESV 325
                 ++++    LEK  + NP  H   +A    +L S+      K+   +++ N   +
Sbjct: 264 MGPE--ERKEGIASLEKYVQANPKSHEARLALAQMYLASDRLDDAQKQFEFMQKDNPNDL 321

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKIL 379
             L+ ++ I ++  ++ +A        + A +       + ++ LAQ+      +T    
Sbjct: 322 TPLMALALIKIQQKNLPEAQNYLQQYAQKAEKTPGADAGQAYIYLAQL-SLEQKDTAGAS 380

Query: 380 YWTQS 384
            W   
Sbjct: 381 RWLDK 385



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 74/247 (29%), Gaps = 51/247 (20%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA----QRYA 177
             L   Q+ LA  + + A ++ E M +        + +L     +  +L  A    Q+YA
Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEFMQKDNPNDLTPLMALALIKIQQKNLPEAQNYLQQYA 348

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            KA + +P A    +A                                    I  +  + 
Sbjct: 349 QKA-EKTPGAD-AGQA-----------------------------------YIYLAQLSL 371

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP---- 293
           ++ D   +     +        I A I  A+ L  Q K   A  +L  I   +P      
Sbjct: 372 EQKDTAGASRWLDKISATSTQYIPAQITRAQLLQRQGKVDDARKLLAGIRAQDPREQALI 431

Query: 294 ---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              + A ++     +    +L +A        +  +     +  A + G  D    +   
Sbjct: 432 ARTDAAILFDAKRYQEAETRLAQA---TGDFPDDPDLTYDYAMAAEKNGHYDVMETQLRK 488

Query: 351 AMKIAPR 357
            M+  P 
Sbjct: 489 LMRTQPD 495



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 8/179 (4%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            ++   A     +   A     A    +  +      +  L Y      A     Y++  
Sbjct: 426 REQALIARTDAAILFDAKRYQEAETRLAQATGD-FPDDPDLTYD-YAMAAEKNGHYDVME 483

Query: 141 EKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            +L  +++       A  +L Y  + R   L  A +   KAL +SP+  ++ ++V     
Sbjct: 484 TQLRKLMRTQPDNAQAYNALGYSLADRGQRLQEADKLVEKALSLSPNDAFIMDSVGWVKY 543

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              + S AI  L +              +           GD   +     ++ KL  +
Sbjct: 544 RLGDTSDAIRVLRKAYDLQPNAE-----IGAHLGEVLWKSGDQDQARAAWRDARKLEPD 597


>gi|317154918|ref|YP_004122966.1| tetratricopeptide domain-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316945169|gb|ADU64220.1| Tetratricopeptide repeat protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 1039

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 43/300 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++ L   + + A +    + Q        +   +F S R+ +  +A + A  A    PD
Sbjct: 98  AEVLLRLGREDEAQKLYHTLDQNDPRVAGGLGDAFFASGRMAEAATAYQRARDAGSQRPD 157

Query: 187 A--------PWVTEA---------------------VV--QQYVLAKEWSRAITFLNQKK 215
                     W  +A                     ++  +    A +  RA   L+Q  
Sbjct: 158 LSLRLAQAMAWSGQAERAAPLLAELHAAHPADVEIALLYSRALAQAGDTRRARAVLDQLA 217

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             A +     A LL   +   A  G   A+   A++++K  D    A +  A+ +     
Sbjct: 218 AAAPD----NATLLFELADLEAALGHASAARKYAMQAVKADDTRQ-ARLRLAQVMTLWGA 272

Query: 276 KRKAEVIL-EKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            +++  I  E +    P P+    +A              + R   +E  N +  ++ + 
Sbjct: 273 FQQSVAIRREHVATQGPEPQVALALAETLASAQRYEEAEGVLRVELME--NPDDTQARLA 330

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++++ L+  + + A A      K      +  L AQ         + +  W + A     
Sbjct: 331 LARVKLQEKNGEAALAVLAPLTKTGSDPRVEALRAQALTLLGRYAEAVAIWRRLAHDDPA 390



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 55/232 (23%), Gaps = 43/232 (18%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  Q      +Y  A      +             L     R GD  +A+    +A  + 
Sbjct: 363 LRAQALTLLGRYAEAVAIWRRLAHDDPAMLVE---LGRALERAGDELAAKDVFDRAYGLD 419

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           PD P          +   +   A                  A  L   +   +  G    
Sbjct: 420 PDFPPAH---YYAVMCRPDCDPA------ALSRELVHTEKDAADLTLWADLFSRDGHHAE 470

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +      +L        A +  A++L                            Y     
Sbjct: 471 AIACLEAALGHDPQFFPAHMALAENL---------------------------AYARRFD 503

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           E+    L R   L     +S + L+  +++       D+A A         P
Sbjct: 504 ES----LNRLDGLATDFPDSSKVLLTRARVLAWAKRYDEAIAAFEALHAADP 551


>gi|258406366|ref|YP_003199108.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
           retbaense DSM 5692]
 gi|257798593|gb|ACV69530.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 252

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 5/168 (2%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A ++  +A+ I P+       + Q YV      +A              +  RA L +A
Sbjct: 86  AAAKHLRQAVAIDPEFAQAWNNLGQVYVAQSRPDKAEQAFQTALDTLTYLSPERAALNLA 145

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288
           R  +  D+     +   A+ +++  D    A +   + L+SQ +  +A   LE       
Sbjct: 146 RLYQQTDR--PQKAADLALRAIEENDRFEPAYLVLNEVLVSQGQIEEALTRLETAQAKLP 203

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             P   +A    HL   NT        R+     +S E+ V    +AL
Sbjct: 204 KRPAMLLALAENHLRVGNTAYARTWFQRIIAAAPQSEEAEVARDYLAL 251


>gi|238796092|ref|ZP_04639603.1| Cellulose synthase operon protein C [Yersinia mollaretii ATCC
           43969]
 gi|238720037|gb|EEQ11842.1| Cellulose synthase operon protein C [Yersinia mollaretii ATCC
           43969]
          Length = 1317

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 91/266 (34%), Gaps = 40/266 (15%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--ALDI 183
             +  LA      A   L  + Q P +    V +L  +    GD ++A     K  +  I
Sbjct: 556 SAEAYLANGDSASAAVILRGLAQNPPSAPSDVGNLAKDLMTAGDSSTAVSLVRKNISSGI 615

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLENADK 239
              A     A +     +     A   L+    Q   +  E +R R    I ++ E  ++
Sbjct: 616 HGKAGDYA-AQIGVLTQSGLTQEAEALLSNPAIQSSSSPIEISRLRMGSAINQADELREQ 674

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G   A+Y   I +L+    +I   +   +   S     +A  +                Y
Sbjct: 675 GQYAAAYDKLIVALQSDPQNIDLMLAMGRLYQSGKMNDEAGKV----------------Y 718

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +L        LKR       +  +  + V    +AL  G +  A    ML M+     E
Sbjct: 719 AYL--------LKR-------DPANEGARVGAVNVALAKGDVQSARQ-LMLGMRGPRTPE 762

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSA 385
             LL A++ +A   + ++ L   +SA
Sbjct: 763 RLLLAARVAEAE-GDHEQALALLRSA 787



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++A  ++  AR++   +    T        LL  ++A AE  +  A      +L+    
Sbjct: 738 VALAKGDVQSARQLMLGMRGPRTPER----LLLAARVAEAEGDHEQAL----ALLRSAKG 789

Query: 153 REFAVYS 159
           +   +  
Sbjct: 790 KMIGLEG 796


>gi|225556678|gb|EEH04966.1| DnaJ domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 745

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%)

Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177
            L+ V+  L          A   +  ML+          +          G+   A ++ 
Sbjct: 396 RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 453

Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225
             AL + PD+          + +++          ++++  AI    +  +   +     
Sbjct: 454 KLALSLDPDSTQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 513

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + LL  R+    +      +  D   +LKL    + A    AK+  +     +A    +K
Sbjct: 514 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 573

Query: 286 IWKVNP 291
           I + NP
Sbjct: 574 IAEANP 579


>gi|261868285|ref|YP_003256207.1| hypothetical protein D11S_1624 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413617|gb|ACX82988.1| tetratricopeptide domain protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 396

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 88/290 (30%), Gaps = 55/290 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151
             +  A ++H  +     +  E    LL  Q     + +      + A     +M+  P 
Sbjct: 91  GEVDRALRIHQALDNSPHYSFEQ--KLLAKQ--QLAKDFMTVGFFDRAENLYILMVDEPE 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                                   +A  AL            V+ Q      W +AI   
Sbjct: 147 ------------------------FAEGALQ--------QLTVIYQKTKE--WKKAINVA 172

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K A + N           +++             +++LK+  N + AS+  A   I
Sbjct: 173 EKLAKIAPKANNVELAQYYCEYVQHLPADSKENRQQILLQALKVSPNCVRASMMLADLAI 232

Query: 272 SQNKKRKAEVILEK------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            Q   + A   LE+       +     P + + Y  L   N +   +  L        + 
Sbjct: 233 QQENYKSAVGFLEEILNQSPAYISEALPALKHCYQKL---NLLDNFELFLIKASRQNNNS 289

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSH 373
             +++++++  E      A  K    ++  P   IF   +  QI+ A   
Sbjct: 290 AVVLMLAELIEEKDGYSAAQLKLYQQLQQNPSTPIFHRFIQYQIDDAEQG 339


>gi|209527262|ref|ZP_03275773.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492329|gb|EDZ92673.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 501

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 61/201 (30%), Gaps = 12/201 (5%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G+   A     +AL   PD      +         ++ +A++  +Q  K   + ++   
Sbjct: 207 SGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHK--- 263

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                R    +D G+   +     E+LK   +          +L    + ++A    ++ 
Sbjct: 264 -AWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQA 322

Query: 287 WKVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            K    P++   +       + L E           L+    +  E           +G 
Sbjct: 323 LKYK--PDLHKAWFSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHLGE 380

Query: 341 IDQAHAKAMLAMKIAPRKEIF 361
             QA +    A+   P   + 
Sbjct: 381 YKQAISSYDQALTYKPDDHVA 401


>gi|110677907|ref|YP_680914.1| hypothetical protein RD1_0522 [Roseobacter denitrificans OCh 114]
 gi|109454023|gb|ABG30228.1| hypothetical protein RD1_0522 [Roseobacter denitrificans OCh 114]
          Length = 645

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             L A         D +     A  +          +  AA    + +  R+   I    
Sbjct: 473 ATLGAELSSMLTDTDPLV-RAAAASAH----GLFPPAERAAALEPALDDPRRMVRI--AA 525

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSID 342
            K      + ++    L+ +   +L  ALR  +       +  E+ +I++  AL M + +
Sbjct: 526 GKT-----LLDVPRSALTPSASERLGAALREWQAGLLNRADFPETHIILAGTALTMRNFE 580

Query: 343 QAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            A       + + P R+E +++L +I  A              AL A+P 
Sbjct: 581 GAERAFREVVLMDPQREEAWVMLVRIADAMRGPQAAAQV-LDEALQAVPG 629


>gi|323174181|gb|EFZ59809.1| cellulose synthase operon protein C [Escherichia coli LT-68]
          Length = 932

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721


>gi|91213036|ref|YP_543022.1| cellulose synthase subunit BcsC [Escherichia coli UTI89]
 gi|117625813|ref|YP_859136.1| cellulose synthase subunit BcsC [Escherichia coli APEC O1]
 gi|218560606|ref|YP_002393519.1| cellulose synthase subunit BcsC [Escherichia coli S88]
 gi|218691814|ref|YP_002400026.1| cellulose synthase subunit BcsC [Escherichia coli ED1a]
 gi|237703300|ref|ZP_04533781.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA]
 gi|91074610|gb|ABE09491.1| cellulose synthase operon protein C [Escherichia coli UTI89]
 gi|115514937|gb|ABJ03012.1| cellulose synthase operon protein C [Escherichia coli APEC O1]
 gi|218367375|emb|CAR05154.1| cellulose synthase subunit [Escherichia coli S88]
 gi|218429378|emb|CAR10196.1| cellulose synthase subunit [Escherichia coli ED1a]
 gi|222035240|emb|CAP77985.1| Cellulose synthase operon protein C [Escherichia coli LF82]
 gi|226902564|gb|EEH88823.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA]
 gi|307628609|gb|ADN72913.1| cellulose synthase subunit BcsC [Escherichia coli UM146]
 gi|312948089|gb|ADR28916.1| cellulose synthase subunit BcsC [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315286199|gb|EFU45635.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3]
 gi|323949771|gb|EGB45655.1| cellulose synthase operon protein C [Escherichia coli H252]
 gi|323954928|gb|EGB50708.1| cellulose synthase operon protein C [Escherichia coli H263]
          Length = 1157

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273
            +                +L + +         +  E   +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++      I            + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K   I   +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738


>gi|301118749|ref|XP_002907102.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262105614|gb|EEY63666.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 5122

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 78/266 (29%), Gaps = 54/266 (20%)

Query: 153  REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            R  A+  L+ E+  + D  +A+  A +            +A++ Q V A +W        
Sbjct: 4853 RALALRWLW-EARDLRD-AAARNVAAE-------LRDKLQALIDQIVEADDWFFGRELRE 4903

Query: 213  QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI------CA 266
                   +     A L   ++  + D    I +    +E+      S  A+         
Sbjct: 4904 AGLALRDDG----AQLAEEQARVDEDLAQKIRATERDVEAFVEDKRSTNATEEKAFNELV 4959

Query: 267  AKSLISQNKKRKAEVILE--KIWKVNPH----------------PEIAN---IYTHLLSE 305
            AK      K R A   LE  + +K                    P +      Y   ++E
Sbjct: 4960 AK-EREDTKARLAARELELLEAYKQKETEFAAAQRQAREAEELVPALVAEHRTYLAKIAE 5018

Query: 306  NTVGKLKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            +   +L+          +  E      + +++ A+       A    +LA++   R  + 
Sbjct: 5019 DRRTELESMEETASAKTQQKEDAFARKLALAEAAV-ASRRALA-QHRILALRKEARGVV- 5075

Query: 362  LLLAQIEQANSHNTDKILYWTQSALH 387
                      S    K   W   A  
Sbjct: 5076 ------RARESAWQSKARSWIDRASR 5095


>gi|253566350|ref|ZP_04843804.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945454|gb|EES85892.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301164672|emb|CBW24231.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 320

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A    + + A +     L I       +  L     + G+   A     + + + P+   
Sbjct: 38  AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQLYIQTGEFGKAHELLERMIALEPELTS 96

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +     + +++         +K  A E     A  L+ ++    D G M  ++   
Sbjct: 97  TYLTLANLCFMQEDYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            +++ L D+   A +  A++L    +  +A   +E I   NP  E A +      +   G
Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211

Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           K + A      + EIN  + ++ + + ++ +    +  A      A+++ P
Sbjct: 212 KEEEAETDYLHVTEINPFNEQAYLYLGQLFITQKKLTAAIELFDEAIELNP 262


>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 818

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 4/177 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + +Y+ A    +  L++      A  +      R G+ + A     +AL + P + 
Sbjct: 375 AFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSA 434

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                         ++ RAI  L+Q  +    +          R +    KGD+  +  D
Sbjct: 435 AAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYH----RGMAFRHKGDLDRALAD 490

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
             E+++L      A      +  ++ +  +A   L +  ++ P  E    +  +  E
Sbjct: 491 LNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRGE 547



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 74/228 (32%), Gaps = 11/228 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +YN A    +  L++      A           G+ + A     +AL  +P   +    
Sbjct: 278 GEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRN 337

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +    E+ RAI    Q  +     +   A     R L   DKG+   +  D  ++L
Sbjct: 338 RGDAFRNKGEYDRAIADYTQALR----LDPQSATAYNNRGLAFQDKGEYDRAIADYDQAL 393

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVG 309
           +L      A      +   + +  +A    E+  +++  P+ A  Y      L  +    
Sbjct: 394 RLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLD--PKSAAAYNGRGAALNKKGDYD 451

Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + +    +   +                  G +D+A A    A+++ P
Sbjct: 452 RAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNP 499



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 11/233 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y+ A    +  L++         +        G+ + A     +AL  +P  P+    
Sbjct: 142 GEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRN 201

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +    E+ RAI   +Q  +   E     A     R L    K +   +  D  ++L
Sbjct: 202 RGDTFQSKGEYDRAIADYDQALRLNPE----DAAAYTHRGLAFQSKSEYDRAIADYDQAL 257

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTV 308
           +L        I    +  S+ +  +A    ++  +++P   IA     + +     EN  
Sbjct: 258 RLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRS-KGENDR 316

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                   L   N +   +           G  D+A A    A+++ P+    
Sbjct: 317 AIADYDQAL-RFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATA 368



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 6/170 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL          A  +  Y         +   Y         + +++ A    E  L++
Sbjct: 372 RGLAFQDKGEYDRA--IADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRL 429

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A         + GD + A     +AL + P            +    +  RA+ 
Sbjct: 430 DPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALA 489

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            LN+  +   ++    A     R +    +G+   +  D  E+++L    
Sbjct: 490 DLNEAVRLNPKY----ADAYQERGVTFQARGESDRALADLAEAVRLKPEL 535



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%)

Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +Y+ A     + +   P +        L F   R G+ + A     +AL + P    + 
Sbjct: 74  GEYDRAIADYDQALRLDPKSAVAYTHRGLAF--YRKGEYDRAIADYDQALRLDPKYANIY 131

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                 +    E+ RAI   +Q  +     +   A++   R      KG+   +  D  +
Sbjct: 132 INRGLAFYRKGEYDRAIADYDQALR----LDLRDAVVYTNRGDAFRSKGEYDRAIADYDQ 187

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENT 307
           +L+       A      +  S+ +  +A    ++  ++N  PE A  YTH      S++ 
Sbjct: 188 ALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLN--PEDAAAYTHRGLAFQSKSE 245

Query: 308 VGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             + +    +   ++ +     +         G  ++A A    A+++ P
Sbjct: 246 YDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 295


>gi|20090723|ref|NP_616798.1| hypothetical protein MA1873 [Methanosarcina acetivorans C2A]
 gi|19915778|gb|AAM05278.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 306

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 74/235 (31%), Gaps = 19/235 (8%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + +  +A +  + +L+       A+Y       ++     A     +A +I P+  
Sbjct: 57  ALYRQGRLRLALKAFDRVLEENPRDFPALYHKGNSLLKLKRYEEALEIFERAAEIKPENA 116

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIA 244
            +   +       + +  A+    +           W    ++L +    E     + ++
Sbjct: 117 GLWTNMGFALKKLERFRDALEAFEKSISLNPVQKNAWEGKDSVLSLISLCE-----EKLS 171

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299
            Y   +E      +   A     K  +   ++ KA    +   +V   PE A  +     
Sbjct: 172 EYEKILERNPGDPD---ALFKTGKLWLRFGEQEKAMQAFKNALEVK--PENAEAWKLRGK 226

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               + +    L        +  +  E+     K+ L++G++  A     +A  +
Sbjct: 227 ILFKAGSEKEALHAFENATRLKPDHPEAWYERGKVFLKLGNLRAAENAFKIAADL 281


>gi|21539655|ref|NP_598462.1| pre-mRNA-processing factor 6 [Mus musculus]
 gi|24212090|sp|Q91YR7|PRP6_MOUSE RecName: Full=Pre-mRNA-processing factor 6; AltName: Full=PRP6
           homolog; AltName: Full=U5 snRNP-associated 102 kDa
           protein; Short=U5-102 kDa protein
 gi|15928820|gb|AAH14869.1| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus]
 gi|26349501|dbj|BAC38390.1| unnamed protein product [Mus musculus]
 gi|37537235|gb|AAH23691.2| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus]
 gi|148675491|gb|EDL07438.1| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus]
 gi|220941571|emb|CAX15563.1| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus]
          Length = 941

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 104/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                   + A  
Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQE 696

Query: 229 LIARSL--------------ENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L              +  ++G+ M  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|330975658|gb|EGH75724.1| peptidase aspartic, active site protein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 654

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 99/335 (29%), Gaps = 52/335 (15%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQ---QHTFHNEYLVY---LLE 126
           +K     GY      L + A H+       ARK  +   +         E L     L E
Sbjct: 91  YKTRPKPGYLEGNQALRAYARHDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDE 150

Query: 127 VQIALAERQYNIA----------HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            Q A+       A           + ++  + +              +   GD ++A   
Sbjct: 151 AQAAI--NDAEQALGPQQVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDNDTAVSE 202

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A +A+   P      + +V   +   +++ A +   +        N N A LL+ R    
Sbjct: 203 AREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMR 258

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHP 293
              GD   +  D  ++  +   ++      A    +  +  +A   L++        P  
Sbjct: 259 QRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRLQQARDAGQLQPGD 315

Query: 294 EIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHA 346
           E+   Y    + +    +   KR  R   +      ++  S +  S  A  +    +   
Sbjct: 316 EVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLD 375

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
                    P +++F             +D    W
Sbjct: 376 YQQTGDLQMPAQQVF-------DTRRAVSDLSREW 403



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 25/216 (11%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L    +L                 TG  ++A  +   A  +        +F  +     L
Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTA--VSEAREAVRSFPKQMAYRKL 219

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            V   +A+ QY  A         +    AT          +  R+GD + A++   +A+ 
Sbjct: 220 LVSALIAQGQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234
           +  + P   +A +  Y    + S A+  L Q +   +         A  L        +L
Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGQLQPGDEVQIAYFLSQAGDDQGAL 333

Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264
           +   + D             A  +++  +++   + 
Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369


>gi|218190772|gb|EEC73199.1| hypothetical protein OsI_07263 [Oryza sativa Indica Group]
          Length = 1004

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 71/240 (29%), Gaps = 14/240 (5%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181
            LL               +  E +   P       Y     +    GD++ A RY   A+
Sbjct: 116 LLLGAIYYQIRNYDMCIAKNEEALAIDPN--FAECYGNMANAWKEKGDVDLAIRYYLTAI 173

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P+       +   Y      + A     Q                         +G 
Sbjct: 174 QLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINP----RLVDAHSNLGNLMKAQGF 229

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +Y+  IE+L++     +A    A   +      KA +  ++  K+   P  A+ Y +
Sbjct: 230 IQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLK--PSFADAYLN 287

Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +       +   +    R  +   +   +   ++ I  E G +D A      A+   P
Sbjct: 288 QGNVYKTMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347



 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 56/188 (29%), Gaps = 18/188 (9%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-- 151
             +  A +          +    +  L  L++ Q          A+    E +   P   
Sbjct: 194 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYNCYIEALRIDPQFA 248

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                +  L+ E+   GDL+ A  Y  +A+ + P            Y        AI   
Sbjct: 249 IAWSNLAGLFMEA---GDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISY 305

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +   ++    A+     +    ++G +  +     +++      + A      +L 
Sbjct: 306 QRAVQARPDY----AMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALK 361

Query: 272 SQNKKRKA 279
              +  +A
Sbjct: 362 DAGRVEEA 369


>gi|196232945|ref|ZP_03131794.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196222923|gb|EDY17444.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 808

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 87/281 (30%), Gaps = 21/281 (7%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE- 144
           +A    L    A  +  A  ++  +      H + L +LL V       Q+  A   L  
Sbjct: 14  QAFDLALQHHQAGRLAEAEGLYRQILAVQPDHAQAL-HLLGVIALQM-GQHEAAENLLRR 71

Query: 145 --MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
              M        + + +      R+ D  +A     +A+++ PD       +      + 
Sbjct: 72  SIAMAPDNPAAHYDLGNALRSRKRLEDAIAAY---RRAIELRPDYVEALHNLGVACKESG 128

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               AI       +          +          ++     +     +++ L  + + A
Sbjct: 129 RLDEAIAAFQGALRLQP----QLMVAHYNLGNALRERKRYGEAIAAYRQAIALGPDYVDA 184

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALR 316
                 +     +  +A    ++  ++ P     H  +   +    + +  +   +RA+ 
Sbjct: 185 HNNLGVACKEAGRFEEAVAAYQRAIELQPDHAAAHNNLGAAWRERGALDEAIVAQRRAIE 244

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           L     +  E+   +     E G  D+A A    ++++ P 
Sbjct: 245 L---RPDFAEAYNNLGVACKERGRTDEAVAAFRRSIELQPD 282



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 19/233 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPW 189
             + + A    +  L++      A Y+L     E  R G+  +A     +A+ + PD   
Sbjct: 127 SGRLDEAIAAFQGALRLQPQLMVAHYNLGNALRERKRYGEAIAAY---RQAIALGPDYVD 183

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +      A  +  A+       + A E   + A           ++G +  +    
Sbjct: 184 AHNNLGVACKEAGRFEEAV----AAYQRAIELQPDHAAAHNNLGAAWRERGALDEAIVAQ 239

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LL 303
             +++L  +   A      +   + +  +A     +  ++ P     H  + N       
Sbjct: 240 RRAIELRPDFAEAYNNLGVACKERGRTDEAVAAFRRSIELQPDFAETHNNLGNTLQECGR 299

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++  +   +RAL L     E   +   ++     +G +D+A A    A+++ P
Sbjct: 300 ADEAIAAYRRALAL---QPEYAAAANNLASTLRSVGLLDEATAAIRRALELQP 349


>gi|60683152|ref|YP_213296.1| hypothetical protein BF3707 [Bacteroides fragilis NCTC 9343]
 gi|265767048|ref|ZP_06094877.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|60494586|emb|CAH09387.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|263253425|gb|EEZ24901.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 320

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A    + + A +     L I       +  L     + G+   A     + + + P+   
Sbjct: 38  AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQLYIQTGEFGKAHELLERMIALEPELTS 96

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +     + +++         +K  A E     A  L+ ++    D G M  ++   
Sbjct: 97  TYLTLANLCFMQEDYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            +++ L D+   A +  A++L    +  +A   +E I   NP  E A +      +   G
Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211

Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           K + A      + EIN  + ++ + + ++ +    +  A      A+++ P
Sbjct: 212 KEEEAETDYLHVTEINPFNEQAYLYLGQLFITQKKLTAAIELFDEAIELNP 262


>gi|291569288|dbj|BAI91560.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 917

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 30/223 (13%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           N      M +Y        N+ + Y    Q+      ++ A    +  + +        Y
Sbjct: 51  NGQFIAAMGAYTKAFELAPNQPISYAYLAQVYRNMGWFDEAISFYQQAIDLSPNWADLHY 110

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L       G++  A     KA+ ++P        +  +     + + AI  L Q + N 
Sbjct: 111 HLGMTWHWQGNIEGAIGCYQKAIALNPKLGEAYLDMALRLNERGDINTAIKVLQQGRINC 170

Query: 219 KEWNRN---------------RAILLIARSLEN---------------ADKGDMIASYHD 248
             +                   AI +   +L                 A +G +  +   
Sbjct: 171 PNFKEIFNTLGYLQLQQNQIDEAIAIFQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAA 230

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +++ L  +  +A     K    +N  R+A    +K   + P
Sbjct: 231 YHKAISLKPDLAIAYSNLGKLWQHKNNHRQAITYFQKAIAIEP 273


>gi|114683099|ref|XP_001151733.1| PREDICTED: PRP6 pre-mRNA processing factor 6 homolog isoform 1 [Pan
           troglodytes]
 gi|119595581|gb|EAW75175.1| chromosome 20 open reading frame 14, isoform CRA_b [Homo sapiens]
          Length = 520

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 158 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 215

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 216 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 275

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 276 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 335

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 336 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 393

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 394 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 451

Query: 391 D 391
           D
Sbjct: 452 D 452


>gi|229016876|ref|ZP_04173804.1| hypothetical protein bcere0030_14440 [Bacillus cereus AH1273]
 gi|229023082|ref|ZP_04179596.1| hypothetical protein bcere0029_14260 [Bacillus cereus AH1272]
 gi|228738228|gb|EEL88710.1| hypothetical protein bcere0029_14260 [Bacillus cereus AH1272]
 gi|228744437|gb|EEL94511.1| hypothetical protein bcere0030_14440 [Bacillus cereus AH1273]
          Length = 420

 Score = 49.2 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 92/271 (33%), Gaps = 39/271 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +    +E ++     ++  ++ +   A    E +L           A+  L   
Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              IG+   A  Y    L+   D   +       Y   +E+ RAI       +  KE + 
Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANISAKLGKITEAEEVL 294

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +     Y ++L E                 E  E L+ V +  ++ G 
Sbjct: 295 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAVVERTIDSGE 336

Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362
                  D A AK  L M        +  + 
Sbjct: 337 PDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367


>gi|301106837|ref|XP_002902501.1| pre-mRNA-processing factor, putative [Phytophthora infestans T30-4]
 gi|262098375|gb|EEY56427.1| pre-mRNA-processing factor, putative [Phytophthora infestans T30-4]
          Length = 961

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 65/212 (30%), Gaps = 10/212 (4%)

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             W+   ++++             + +  K   ++ +     +  +  E  D  +   + 
Sbjct: 691 HVWMKSVLLERECAENR-KDEEDLVQEGIKLYPDFPKLYM--MAGQFYEALDPPNFEKAK 747

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               E ++ C  SI     +++     N   KA  +LE     NP  ++  ++       
Sbjct: 748 KMYREGVQHCPKSIALWTLSSRLEEKMNGVTKARSVLEMARLKNPKNDM--LWLEAARLE 805

Query: 307 TV-GKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
                 K    L     +E  ES +++++         Q  A      K      + L +
Sbjct: 806 ARWDNSKGQEMLMAKALQECPESGILLAESIDIAPRAQQKRASFTALKKKDNDPSVCLSV 865

Query: 365 AQIEQANSHNTDKILYWTQSA--LHAMPDPLW 394
           A++         K   W +    L +     W
Sbjct: 866 AKLFWQERK-YSKARKWMERTIQLDSDLGDAW 896


>gi|223939617|ref|ZP_03631491.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223891668|gb|EEF58155.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 502

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 43/224 (19%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  E  RIG   +A++Y ++A  I+P +P   E +        +   AI FL Q   + 
Sbjct: 305 HLGNELLRIGRGETAEKYFSQAHKIAPASPLPYEGLGLLAAHEHKSEAAIDFLKQAFDHG 364

Query: 219 KEW---------NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                        + R            +K    A   +  +S+ +  +   A       
Sbjct: 365 STSFLAHYVYAQEKFRQTADSRERYTKLEKDAASAIREELEKSIAVMPSFGPAQHLLGFF 424

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            I Q                    ++A         +    L+RA++LE  N+  + S  
Sbjct: 425 EIVQGD------------------DLA---------SAEQHLQRAIQLEPENQSYLFS-- 455

Query: 330 IVSKIALEMGSIDQAHAKAMLA----MKIAPRKEIFLLLAQIEQ 369
            +++  +     D A           +    R++   +LA+I +
Sbjct: 456 -LAQAQIARNEPDAARQTLDPLRLPNVDKKLRQQAEQILAEIPR 498


>gi|237836913|ref|XP_002367754.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii
           ME49]
 gi|211965418|gb|EEB00614.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii
           ME49]
          Length = 985

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 110/353 (31%), Gaps = 60/353 (16%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL  G ++ A        +     + +     + L   L    A  E ++    +  ++
Sbjct: 615 EALSRGSVATA--------RALYTCAIERLKTKKSLWLAL----ADLETKHGTTQDLEKL 662

Query: 146 MLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           + +     P      +  L  +    GD+ +A++   +A   + +   ++ A V+     
Sbjct: 663 LAKAVVCCPQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLEREN 721

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-- 259
            E++RA   L + + +          + + R + + D    IA   +A++S   C     
Sbjct: 722 HEFARARKILKRTRAHVNTQKVWIQSVQLERQVGDYDAA--IALCEEALKSHAECPKLWM 779

Query: 260 --------------------------------IMASICAAKSLISQNKKRKAEVILEKIW 287
                                           +   +CA      Q K   A  ILEK  
Sbjct: 780 IGGQLHREHPTKKDEEKAAEVFQRGTVVCCRSVPLWLCAVDCQREQGKWSVARAILEKAK 839

Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAH 345
             NP +P++ +    +  E   G  + A  +      E   S ++ ++         Q H
Sbjct: 840 LRNPKNPDLWHAAIRIEVE--AGNKQMAQHVASKAVQECPNSGLVWAEAIFLEEKSAQTH 897

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396
                  K      + L +A +         K   W   ++   A     W +
Sbjct: 898 KAVDALTKCENDVHLVLAVACLFWKEGK-ISKARKWLNRSVTLDASFGDAWAA 949


>gi|206603244|gb|EDZ39724.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 468

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 90/306 (29%), Gaps = 29/306 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPW 189
                 A                 V +L   Y ++ R+ D  +                 
Sbjct: 131 TGDATGAIRLHRRARVFDEEDVRLVIALCEDYRQAGRLDDEIAILS--EYFHKKEGRNID 188

Query: 190 VTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIAR---SLENADKGDMI 243
           V      + V  ++W  A+     L++     +  +   + L+  R      + +  +  
Sbjct: 189 VLGRYRDRLVSRQKWEEALAVQSVLSRSFGKGERRDLEVSYLVGIRYETGRHHLEHAETE 248

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +      +LK+      A I  A++   + +  +A   LE+ ++ +  P    +Y +LL
Sbjct: 249 LARRSFRGALKIDPLFSPARIGLAEAQSREGRVSEALTTLEEGFQRDRDP----VYLYLL 304

Query: 304 SE------NTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIA 355
            E      +    L    R    + ++  S ++ ++  L   +  +D A  +        
Sbjct: 305 EEMALEAGSPERILTPFERAVLSDPQN--SSLLYAQARLYDRLMMVDLALDRLESLEGRE 362

Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDDGYLSSVWLPLSPIS 412
             +   + LL  +    + +    L   Q    A   P  L+    G     W       
Sbjct: 363 NWEGEFYRLLGDL-YLRNKDRVNALEAFQKGARAENHPGRLYCRFCGQRYLQWAGKCLSC 421

Query: 413 KTLCYF 418
                 
Sbjct: 422 HRWGAL 427


>gi|119946471|ref|YP_944151.1| sulfotransferase [Psychromonas ingrahamii 37]
 gi|119865075|gb|ABM04552.1| sulfotransferase containing TPR domain [Psychromonas ingrahamii 37]
          Length = 889

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 12/170 (7%)

Query: 101 PLARKMHSYVSQQHTFHNEYL--VYLLEVQI----ALAERQY---NIAHEKLEMMLQIPA 151
             A K  +          + L  +  L  Q     A  E Q    +++ +    +L   A
Sbjct: 312 KAAEKAVALAQALTETPEQPLAEIKWLRAQASNVLAQVESQEQNFDLSEKLYRDILTEHA 371

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+  L  +  + G ++ A     +   I P       A++      ++    +  +
Sbjct: 372 HFLPALQGLAQQLMQQGHIDEALELFERVKQIDPIKG--HSALINARRFPED-VETLDKM 428

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
               K        +A +L   +     + +   ++  A ++       + 
Sbjct: 429 AAAAKQPSIEGSLKAGILFQLASAWEKRKEFDKAFGFANQANAASKQFLP 478


>gi|326471293|gb|EGD95302.1| pre-mRNA splicing factor prp1 [Trichophyton tonsurans CBS 112818]
          Length = 937

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G++++ +R   +A   +
Sbjct: 578 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 636

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230
           P+   +  A V+      +  +A   L+  ++ A                 NR+ A+ L+
Sbjct: 637 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 696

Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            + L+                   G +  +        + C  S+   + A++       
Sbjct: 697 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 756

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     L +A  L     +E   S ++ S+
Sbjct: 757 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 814

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +  +      K+     +F+ +A+I        +K + W + A+ A  D
Sbjct: 815 SIWHLESRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 872


>gi|182415050|ref|YP_001820116.1| tetratricopeptide TPR_4 [Opitutus terrae PB90-1]
 gi|177842264|gb|ACB76516.1| Tetratricopeptide TPR_4 [Opitutus terrae PB90-1]
          Length = 514

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 11/197 (5%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
               + A+    +A+ ++P A    + +   Y   ++ ++A   L Q +      N    
Sbjct: 197 REHRDRARALFERAIQVNPAAFDAYQLLSALYFKQEQPAQARDLLEQARPRLAPANPTAW 256

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              + R+      G    +   A E L L  +S         +L    +   A    E  
Sbjct: 257 FTYLCRAYRLL--GQPAEAERVAREGLALKSDSPELLEALGLALADLGRHTDAVPAYETA 314

Query: 287 WKVNPHPE-----IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              NP+       +A     L   ++ +  L R+L L         +L++ ++I +    
Sbjct: 315 LGRNPNDASINYNLAVSLLALRRLDDVLAALDRSLTL---QPAFPPTLLLRARIEMAAAH 371

Query: 341 IDQAHAKAMLAMKIAPR 357
             +A       ++  P 
Sbjct: 372 WPEAETYLRPLIESHPD 388


>gi|110761280|ref|XP_623891.2| PREDICTED: pre-mRNA-processing factor 6-like [Apis mellifera]
          Length = 931

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 29/149 (19%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GD+ +A+   + A   +P++  +  A V+      E+ RA   L + + +A        
Sbjct: 610 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMK 669

Query: 227 I-----------------------------LLIARSLENADKGDMIASYHDAIESLKLCD 257
                                         L + +      +G++  +     +++K C 
Sbjct: 670 SAKLEWALNNLDAALLLLKEALEAFDDFPKLWLMKGQIEEQQGNLDKALETYNQAIKKCP 729

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
           NSI      A+    + +  KA  +LEK 
Sbjct: 730 NSIPLWRLLAQLEHRKGQVTKARSVLEKA 758



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +          
Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 335

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     +S++    S+   I AA        KR    +  K 
Sbjct: 336 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETETKAKR---RVYRKA 385

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SV+  + ++++     + D A
Sbjct: 386 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 12/225 (5%)

Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + G L  A+     AL   P   + W+  A  ++             L    + A     
Sbjct: 541 QQGALECARAVYAYALSTFPSKKSIWLRAAYFEKT------YGTRESLESLLQRAVAHCP 594

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +L +  +      GD+ A+      + +   NS    + A K     ++  +A  +L
Sbjct: 595 KSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLL 654

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE--MGSI 341
            K     P P +      L            L  E +        + + K  +E   G++
Sbjct: 655 AKARASAPTPRVMMKSAKLEWALNNLDAALLLLKEALEAFDDFPKLWLMKGQIEEQQGNL 714

Query: 342 DQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           D+A      A+K  P    ++ LLAQ+E        K     + A
Sbjct: 715 DKALETYNQAIKKCPNSIPLWRLLAQLEHRKGQ-VTKARSVLEKA 758


>gi|190890790|ref|YP_001977332.1| hypothetical protein RHECIAT_CH0001173 [Rhizobium etli CIAT 652]
 gi|190696069|gb|ACE90154.1| hypothetical protein RHECIAT_CH0001173 [Rhizobium etli CIAT 652]
          Length = 479

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 67/228 (29%), Gaps = 37/228 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149
           G++  AA +   A+    Y+     +      +     +     + + A       +   
Sbjct: 251 GVILKAAGDRTAAQ--ARYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCR 308

Query: 150 PA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQ----QYVL 200
           P        +  L+ E    GD   A  +  +AL + P            ++        
Sbjct: 309 PDHVDALLRLAGLFDE---WGDQFEAHHHFREALRLRPGFAEAHNNFGVFLEKNGDAQAA 365

Query: 201 AKEWSRAIT--------------FLNQKKKNAKEWNRNRAILLIARSLE--------NAD 238
              + +A+                L  +   A E +   A+  +    E          +
Sbjct: 366 ESHYRQALQLRSDYAEAHYNYAMLLEGRDVEAAESHYRAALSSLPMYAEAHNNLGVLLHE 425

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           KG +I +    + +++L  +        A  L +  ++ +A+    K 
Sbjct: 426 KGALIEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQADRYARKA 473



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 72/221 (32%), Gaps = 19/221 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD  +AQ     A+ + P  P                  A     Q  K   +    
Sbjct: 255 KAAGDRTAAQARYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCRPD--HV 312

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+L +A   +  + GD   ++H   E+L+L      A       L      + AE    
Sbjct: 313 DALLRLAGLFD--EWGDQFEAHHHFREALRLRPGFAEAHNNFGVFLEKNGDAQAAESHYR 370

Query: 285 KIWKVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +  ++    + A  +                   RA  L  +     E+   +  +  E 
Sbjct: 371 QALQLRS--DYAEAHYNYAMLLEGRDVEAAESHYRA-ALSSL-PMYAEAHNNLGVLLHEK 426

Query: 339 GSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHN 374
           G++ +A +  + A+++ P      + + LLLA + +    +
Sbjct: 427 GALIEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQAD 467



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/242 (10%), Positives = 66/242 (27%), Gaps = 23/242 (9%)

Query: 131 LAERQYNIAHEKLE-------MMLQIPATREFA----VYSLYFESCRIGDLNSAQRYATK 179
             +  +                +      R  A    +           +L   +    K
Sbjct: 176 ELKGDFLPRRHLYRVVSVDRTALAARSEERMTAEDWFLKGAGMAGADEKELAEERHCYEK 235

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL++  + P     +      A +     T    +  +A              ++   + 
Sbjct: 236 ALELRANYPEANNNLGVILKAAGD----RTAAQARYLDAIRLWPQYPEAHYNFAILLEET 291

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
           G    +     ++LK   + + A +  A        + +A     +  ++ P     H  
Sbjct: 292 GRPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHHFREALRLRPGFAEAHNN 351

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              ++     +    +      L ++  +  E+    + + LE   ++ A +    A+  
Sbjct: 352 FG-VFLEKNGDAQAAESHYRQAL-QLRSDYAEAHYNYAML-LEGRDVEAAESHYRAALSS 408

Query: 355 AP 356
            P
Sbjct: 409 LP 410


>gi|24212838|ref|NP_710319.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24193495|gb|AAN47337.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 1197

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 67/179 (37%), Gaps = 5/179 (2%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +Y G   +   +  +A+  +    +   F  E  VY    ++     +   + E  +  L
Sbjct: 419 IYEGDRHLRKGDTKIAKTFYEKAKK--AFEQEPSVYNAFGRLHFISGELKASEENFKKAL 476

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            I      A+  L        +   A +Y  +  +++ + P     + + Y   KE+ +A
Sbjct: 477 SIDKQNIPALQGLIRLYSSQKNQTLANQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536

Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
                 L +K  N +  N   A+L    SLE  +K +  ++ +   ++ KL  +    +
Sbjct: 537 ENVYKNLQKKFPNNEAINFRLAMLYYKISLEENEKNNHDSALNWISKAEKLSKDIPEIA 595



 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 57/204 (27%), Gaps = 41/204 (20%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-----------TREFAVYSLYFESCRI 167
              + +     A+  ++Y  A    E   +              TR  +      ++ R 
Sbjct: 192 PAQLNMQLGDAAVQLKKYEEAEVYFEEARKNDPELLSAKKSASVTRVASALENGNQAMRK 251

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW------ 221
            +   A  +   A+   P  P     +    +L+ E+  A+           ++      
Sbjct: 252 KNYKEAASHFQTAIQNDPKNPTPYIFLGNARILSGEYEAALKAFESSLALKSDYQEAISG 311

Query: 222 ---------NRNRAILLIARS---------------LENADKGDMIASYHDAIESLKLCD 257
                    N  +++ ++ ++               L     G+   +      + +L  
Sbjct: 312 IAAVYYKTGNYRKSVAVLEKATSQFPNNAVYQNQMGLNMKALGEPAKALVYFTRAKELDP 371

Query: 258 NSIMASICAAKSLISQNKKRKAEV 281
             +         LIS+N+ + A  
Sbjct: 372 TFVEPVTNLVFLLISENRYKTARK 395


>gi|228469977|ref|ZP_04054893.1| TPR domain protein [Porphyromonas uenonis 60-3]
 gi|228308358|gb|EEK17196.1| TPR domain protein [Porphyromonas uenonis 60-3]
          Length = 659

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 69/195 (35%), Gaps = 20/195 (10%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A     A      ++Q+H    E   Y L  +IAL  +    A E++   L I +    
Sbjct: 142 GAEQYERADSAALALTQRH--PKEARGYFLAAEIALRRQDTVAAEERIAEGLAIDSLSAA 199

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAI 208
               L   +   GD   A RY  K+++  P+              + +     +++++A+
Sbjct: 200 PYRMLSAIAYLRGDNKGALRYHDKSIEQDPNQASDYINRGLTRYKLKEYRGAMEDYNQAL 259

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                          + A+    R+L   + GD+  +  D +E ++L   ++ A    A 
Sbjct: 260 LL-----------TPHDAVARHNRALLRIEVGDLQGAREDLLEVVRLQPTNLTAHFNLAL 308

Query: 269 SLISQNKKRKAEVIL 283
                 + R A   L
Sbjct: 309 VQTQTGRYRDAIETL 323


>gi|293390070|ref|ZP_06634404.1| tetratricopeptide domain protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950604|gb|EFE00723.1| tetratricopeptide domain protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 396

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 88/290 (30%), Gaps = 55/290 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151
             +  A ++H  +     +  E    LL  Q     + +      + A     +M+  P 
Sbjct: 91  GEVDRALRIHQALDNSPHYSFEQ--KLLAKQ--QLAKDFMTVGFFDRAENLYILMVDEPE 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                                   +A  AL            V+ Q      W +AI   
Sbjct: 147 ------------------------FAEGALQ--------QLTVIYQKTKE--WKKAINVA 172

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K A + N           +++             +++LK+  + + AS+  A   I
Sbjct: 173 EKLAKIAPKANNVELAQYYCEYVQHLPADSKENRQQILLQALKVSPSCVRASMMLADLAI 232

Query: 272 SQNKKRKAEVILEK------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            Q   + A   LE+       +     P + + Y  L   N +   +  L        + 
Sbjct: 233 QQENYKSAVGFLEEILNQSPAYISEALPALKHCYQKL---NLLDNFELFLIKASRQNNNS 289

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSH 373
             +++++++  E      A  K    ++  P   IF   +  QI+ A   
Sbjct: 290 SVVLMLAELIEEKDGYSAAQLKLYQQLQQNPSTPIFHRFIQYQIDDAEQG 339


>gi|212528810|ref|XP_002144562.1| mRNA splicing factor (Prp1/Zer1), putative [Penicillium marneffei
           ATCC 18224]
 gi|210073960|gb|EEA28047.1| mRNA splicing factor (Prp1/Zer1), putative [Penicillium marneffei
           ATCC 18224]
          Length = 942

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 112/334 (33%), Gaps = 47/334 (14%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----P 150
           IA      AR +++Y  +            L    A  ER +       +++ +     P
Sbjct: 553 IARGKYETARAIYAYALRVFVTSK---TLWLAA--ADLERNHGTKEALWQVLEKAVEACP 607

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            +    +  L  E  + G++++A+    +A   +P+   +  A V+    A+E   A   
Sbjct: 608 QSEVLWMQ-LAKEKWQAGEIDNARLVLKRAFARNPNNEDIWLAAVKLETDAQETEHAREL 666

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKG-----------------------------D 241
           L+  ++ A         +   R L N D+                               
Sbjct: 667 LSTARREAGTDRVWIKSVAFERQLGNMDEALDLVNQGLQLYPKADKLWMMKGQIYESQKK 726

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +        + C  S+   + A++         KA  IL++       P+ A ++T 
Sbjct: 727 YPQAREAYGTGTRACPQSVPLWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWTE 784

Query: 302 -LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPR 357
            +  E     + +A  L     +E   S ++ ++    LE  +  +  +      K+   
Sbjct: 785 SVRVERRASNISQAKVLMAKALQEVPNSGLLWAESIWHLEPRTHRKPRS-LEAIKKVEND 843

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             +F+ +A+I        +K + W + ++ A  D
Sbjct: 844 PILFVTVARIFWDERR-LEKAMTWFEKSILADSD 876


>gi|156744127|ref|YP_001434256.1| hypothetical protein Rcas_4211 [Roseiflexus castenholzii DSM 13941]
 gi|156235455|gb|ABU60238.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 522

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 200 LAKEWSRAITFLNQKKK--------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           L  +++ AI                 A+ ++R RAI+ +      A + D   +  + +E
Sbjct: 41  LRADYANAIEHFKAALIAAYIEGEERAQIYDRERAIIYLYIGNALAYQEDWEGALREYLE 100

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
           +++       A      +  +Q +  +A    ++  + NP     H  +   Y  L  ++
Sbjct: 101 AVQTDPQLSEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNPRLYEAHFSLGRCYQRL--DD 158

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                    +  +   ++ E    +  +    G+ + A      A+++ P 
Sbjct: 159 AGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209



 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 95/280 (33%), Gaps = 27/280 (9%)

Query: 106 MHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY-SLY 161
                 ++   HN  L   +    +          A+    +     P   E   Y  L 
Sbjct: 127 RAIAAFKEAIEHNPRLYEAHFSLGRCYQRLDDAGRAYIHYDQACQARPQAAEPRYYMGLM 186

Query: 162 FESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAK--EWSRAITFLNQKKKN 217
            +    G    AQR   +AL + P   +P + + V+      +  +W   ++   +++  
Sbjct: 187 HQ--SHGAHELAQRCFAEALRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGY 244

Query: 218 AKEWNRNRAILLIARSLENADK---GDMIASYHDAIESLKLCDNSIM-------ASICAA 267
            +E  R    LL  R  E+  +   G+++A      E+L+              A I  +
Sbjct: 245 EEEAERIYRALLQWRPEEHYARYLLGNLLARARRLDEALEEYAQIPPQDKYYVDARIRIS 304

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINK 322
             L  QNK R+A   L +      HP    ++ ++           G +K   R  ++  
Sbjct: 305 AILKLQNKTREAYDTLFEC--ARLHPANGQLFLNMGKLLYDMNKHAGAIKAFERAVQLLP 362

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
              ++  ++  +   MG    A A    A+++AP      
Sbjct: 363 NDPQAHYLLGFMYNLMGREGWALAAWRKAVELAPDAHSLR 402



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 57/201 (28%), Gaps = 29/201 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             D   A R   +A+   P        +   +       RAI    +  ++        A
Sbjct: 88  QEDWEGALREYLEAVQTDPQLSEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNP--RLYEA 145

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              + R  +  D  D   +Y    ++ +    +            S      A+    + 
Sbjct: 146 HFSLGRCYQRLD--DAGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEA 203

Query: 287 WKVNPH---PEI-------------ANIYTHLLS-------ENTVGKLKRALRLEEINKE 323
            +V P    PE+             A  Y  L +       E    ++ RA  L +   E
Sbjct: 204 LRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGYEEEAERIYRA--LLQWRPE 261

Query: 324 SVESLVIVSKIALEMGSIDQA 344
              +  ++  +      +D+A
Sbjct: 262 EHYARYLLGNLLARARRLDEA 282


>gi|67920836|ref|ZP_00514355.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856953|gb|EAM52193.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 380

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 21/273 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +     N   A K +       +  N    Y L   +A      N A      +   P
Sbjct: 100 GYLHSKQGNHSAAVKYYQKALSLDSS-NPNFYYALGDSLANVGDNNNAASAYYYAIQLNP 158

Query: 151 ATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             +   +   L     R  D   A     + + + P+ P     +    +  K+  +A+ 
Sbjct: 159 --KFVKSYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQ 216

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +L    +        R +L  A       +G +         + ++   +I   +  A+ 
Sbjct: 217 YLGNAVQRFPRDVDLRLLLATAY----LQQGQLELGKEHLKRAERVDPRNIKVQLKIARI 272

Query: 270 LISQNKKRKAEVILEKIW---KVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEIN 321
              Q+   +A  I   +    + NP       +       L  ++ +G       L EI 
Sbjct: 273 YEVQDNLDEALNIYRSVSFFNRKNP-----EAFAGVGRIQLAQKDYLGATITYQDLIEII 327

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            ++ E    +     E     +A      A K+
Sbjct: 328 PQNPEPYYYLGMAFKERNRNGEAKKALDYAKKL 360



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 40/246 (16%)

Query: 135 QYNIAHEKLE--MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            Y  A    +    L     + F+    Y  S + G+ ++A +Y  KAL +    P    
Sbjct: 74  DYQRAIAIYQQAASLDTDNAKIFSGIG-YLHS-KQGNHSAAVKYYQKALSLDSSNPNFYY 131

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+        + + A +      +   ++ ++     I   +    + D   +       
Sbjct: 132 ALGDSLANVGDNNNAASAYYYAIQLNPKFVKS----YIGLGVVLLRQEDYEGAAEAYKRV 187

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           + L  N+  A      SL+ Q +  +A   L                      N V +  
Sbjct: 188 IALDPNNPEAFAIMGSSLLQQKQLDQALQYL---------------------GNAVQRFP 226

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQAN 371
           R + L           ++++   L+ G ++        A ++ PR  ++ L +A+I +  
Sbjct: 227 RDVDL----------RLLLATAYLQQGQLELGKEHLKRAERVDPRNIKVQLKIARIYEVQ 276

Query: 372 SHNTDK 377
            +  + 
Sbjct: 277 DNLDEA 282



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 28/205 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLE---------------NADKGDMIASYHDAIESL 253
             L + + +  + +  RAI +  ++                 ++ +G+  A+     ++L
Sbjct: 61  DLLRRGRDHVDKRDYQRAIAIYQQAASLDTDNAKIFSGIGYLHSKQGNHSAAVKYYQKAL 120

Query: 254 KLC---DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSE 305
            L     N   A      SL +      A        ++N  P+    Y  L       E
Sbjct: 121 SLDSSNPNFYYA---LGDSLANVGDNNNAASAYYYAIQLN--PKFVKSYIGLGVVLLRQE 175

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           +  G  +   R+  ++  + E+  I+    L+   +DQA      A++  PR     LL 
Sbjct: 176 DYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVQRFPRDVDLRLLL 235

Query: 366 QIEQANSHNTDKILYWTQSALHAMP 390
                     +      + A    P
Sbjct: 236 ATAYLQQGQLELGKEHLKRAERVDP 260


>gi|170726662|ref|YP_001760688.1| tetratricopeptide repeat-containing protein [Shewanella woodyi ATCC
           51908]
 gi|169812009|gb|ACA86593.1| Tetratricopeptide domain protein [Shewanella woodyi ATCC 51908]
          Length = 386

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 32/217 (14%)

Query: 168 GDLNSAQRY--ATKALDI---SPDAPWVTEA-VVQQYVLAKEWSRAITFLNQ-KKKNAKE 220
            D  +A  Y  A +         D   V E  ++  Y + K+W +AI  +   K+K  + 
Sbjct: 115 KDYQAAGFYDRAEEIFLNLVKQEDHSEVAEEHLIDIYQITKDWQKAINIIKTLKRKRQQC 174

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +  N A      + E  +  + +     AI   KL  N   A +  A+  +   +  K  
Sbjct: 175 FKHNTAHFYCELADEETESSEQVKLLQSAI---KLDSNCARALLTLARQYLELGEFAKCI 231

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA----- 335
            +L K         + +    L+ +      +  ++  +         + +S+ A     
Sbjct: 232 EMLTK---------LIDADIDLVPDALSTAKQAFIKKGDQVGYCEYLRLALSEGAGASVA 282

Query: 336 -------LEMGSIDQAHAKAMLAMKIAPRKEIFL-LL 364
                  +E G   +A    +  +   P  + F  L+
Sbjct: 283 VNLAHNLIEQGEHKEAEKLILDGLYRNPTMKSFQHLM 319


>gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102]
 gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 409

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 84/259 (32%), Gaps = 14/259 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A    +  + +      A ++L     R+  L  A     KAL + P+
Sbjct: 90  ANTLDDQGKPQEAIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLEPN 149

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+T      +    +    A           D+G++  + 
Sbjct: 150 YADAHYNLGNALYTQGKLTEAVTEYTAAIRLKPSY----APTYTRLGNALYDRGELAEAV 205

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANI-YT 300
               +S+        A      +L +Q K  +A        +++P +P     + N  Y 
Sbjct: 206 TQYKKSISFDPKYADAHYYLGNALYAQGKSAEAIAEYTAAIRLSPKNPAGYNALGNTLYA 265

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KE 359
               E  + + K+AL LE       ++   ++      G + +A      A++I P+  +
Sbjct: 266 QGKLEEAIAQYKQALNLE---PNYADAHYNLASAFYAQGKLTEAITDYTEAIRIDPKHAQ 322

Query: 360 IFLLLAQIEQANSHNTDKI 378
            +  LA          + I
Sbjct: 323 AYTGLANAMDDQGKPQEAI 341



 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 11/196 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + GD   A+    KA+++ P+      A+        +   AI   + KK  + + + + 
Sbjct: 61  KQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIA--HYKKAISLDPHDSG 118

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A   +  +L   ++ +   + +   ++L L  N   A      +L +Q K  +A      
Sbjct: 119 AYFNLGLTLARLNQLEPAIAQYK--KALSLEPNYADAHYNLGNALYTQGKLTEAVTEYTA 176

Query: 286 IWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             ++   P  A  YT L +           + +  +    + +  ++   +       G 
Sbjct: 177 AIRLK--PSYAPTYTRLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNALYAQGK 234

Query: 341 IDQAHAKAMLAMKIAP 356
             +A A+   A++++P
Sbjct: 235 SAEAIAEYTAAIRLSP 250



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 70/227 (30%), Gaps = 7/227 (3%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +  +  A       +++      A  +L       G    A  +  KA+ + P       
Sbjct: 62  QGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIAHYKKAISLDPHDSGAYF 121

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        +   AI    +    + E N   A   +  +L    +G +  +  +   +
Sbjct: 122 NLGLTLARLNQLEPAIAQYKKAL--SLEPNYADAHYNLGNALYT--QGKLTEAVTEYTAA 177

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVG 309
           ++L  +          +L  + +  +A    +K    +P    A+ Y          +  
Sbjct: 178 IRLKPSYAPTYTRLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNALYAQGKSAE 237

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +        ++ ++      +       G +++A A+   A+ + P
Sbjct: 238 AIAEYTAAIRLSPKNPAGYNALGNTLYAQGKLEEAIAQYKQALNLEP 284



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 9/138 (6%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+           +GD   +     ++++L  N + A I  A +L  Q K ++A    +K
Sbjct: 49  AVANFEEGSNLYKQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIAHYKK 108

Query: 286 IWKVNPHP-----EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              ++PH       +      L   E  + + K+AL LE       ++   +       G
Sbjct: 109 AISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLE---PNYADAHYNLGNALYTQG 165

Query: 340 SIDQAHAKAMLAMKIAPR 357
            + +A  +   A+++ P 
Sbjct: 166 KLTEAVTEYTAAIRLKPS 183



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 6/189 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   +    +      L          +   A  + +  +        A 
Sbjct: 165 GKLTEAVTEYTAAIRLKPSYAPTYTRL--GNALYDRGELAEAVTQYKKSISFDPKYADAH 222

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y L       G    A    T A+ +SP  P    A+        +   AI     + K 
Sbjct: 223 YYLGNALYAQGKSAEAIAEYTAAIRLSPKNPAGYNALGNTLYAQGKLEEAI----AQYKQ 278

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A     N A      +     +G +  +  D  E++++      A    A ++  Q K +
Sbjct: 279 ALNLEPNYADAHYNLASAFYAQGKLTEAITDYTEAIRIDPKHAQAYTGLANAMDDQGKPQ 338

Query: 278 KAEVILEKI 286
           +A    +K 
Sbjct: 339 EAIAHYKKA 347


>gi|269838348|ref|YP_003320576.1| hypothetical protein Sthe_2333 [Sphaerobacter thermophilus DSM
           20745]
 gi|269787611|gb|ACZ39754.1| Tetratricopeptide TPR_2 repeat protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 826

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/331 (13%), Positives = 106/331 (32%), Gaps = 52/331 (15%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL ++       +A     + A ++ RA+    Q   +  +      +L  A      ++
Sbjct: 3   ALLLAEAVQQAQDA-----IGAGDYRRAVETCRQVLHSYPDCVTAHRLLGEAY----LEQ 53

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANI 298
            D  ++      +L+     + A +       ++ +  KA    +  W++ P   ++   
Sbjct: 54  RDEASAERAFTAALQRDPQCVGAYVGLGLIAETRREPEKALAFFQAAWEIAPTRNDLRER 113

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVES-----------------------LVIVSKIA 335
              L S+    + +  L    +     ++                        + +++  
Sbjct: 114 VVRLASDTYGPEGRLQLTRAALGSIHYQAGRWGRAVNECAAVLAEYPGRVDVRLRLAEAL 173

Query: 336 LEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
              G  ++A A     ++ +P      +LLA IE+   ++ +      +  + A  DP  
Sbjct: 174 WRRGEWERAAANCRAVLEQSPGAFGALVLLADIERRLGNDEEAAK--LRERVRA-ADP-- 228

Query: 395 ISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454
              DG  ++  L   P    + +F    P    E ++   ++       PA D  +    
Sbjct: 229 ---DGSRAAEMLAAVPD--RVDFFLPAEPPVVEE-LAEPAVDVERPRIGPAPDFTAP--- 279

Query: 455 GKKNHLPSIKKVSSFEDSTIHPLDPHIRQPD 485
                +      + +E     P  P    PD
Sbjct: 280 ----EIDETPPAAMWESVAPEPAIPVEDAPD 306



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 70/241 (29%), Gaps = 27/241 (11%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +A+     +I A +   A +    V   H++ +    + L  +  L +R    A      
Sbjct: 8   EAVQQAQDAIGAGDYRRAVETCRQV--LHSYPDCVTAHRLLGEAYLEQRDEASAERAFTA 65

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-------------------- 185
            LQ       A   L   +    +   A  +   A +I+P                    
Sbjct: 66  ALQRDPQCVGAYVGLGLIAETRREPEKALAFFQAAWEIAPTRNDLRERVVRLASDTYGPE 125

Query: 186 -DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                   A+   +  A  W RA+              R    L +A +L    +G+   
Sbjct: 126 GRLQLTRAALGSIHYQAGRWGRAVNECAAVLAEYP--GRVDVRLRLAEAL--WRRGEWER 181

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +  +    L+    +  A +  A          +A  + E++   +P    A      + 
Sbjct: 182 AAANCRAVLEQSPGAFGALVLLADIERRLGNDEEAAKLRERVRAADPDGSRAAEMLAAVP 241

Query: 305 E 305
           +
Sbjct: 242 D 242


>gi|262195270|ref|YP_003266479.1| serine/threonine protein kinase with TPR repeats [Haliangium
           ochraceum DSM 14365]
 gi|262078617|gb|ACY14586.1| serine/threonine protein kinase with TPR repeats [Haliangium
           ochraceum DSM 14365]
          Length = 884

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 63/236 (26%), Gaps = 47/236 (19%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA----------QRYATKALDISPD 186
           + A    + ML+           L            A          +  A +A+ + P 
Sbjct: 519 DAAEALFQRMLRRDPDSAAGHAGLARAYWHRYAYADASRDPAFLQQTRALAERAVALDPL 578

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                 ++ +  +   +  +A + L    +         A      +   A +     + 
Sbjct: 579 LADAHLSLGRVLLELGQLDQAESELRSALQ----LEPGNADAYYGMAHLYAHREQPAEAE 634

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSE 305
                +++             + L                       ++  +Y  L   +
Sbjct: 635 TAYRAAIERAPER--------RYLYD---------------------DLGALYVQLGRLD 665

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            T  + +RA+ L     +S+     +  + L  G    A      A+KI P   ++
Sbjct: 666 ETAAQFERAIELA---PDSIYGYSNLGVVHLLAGRYQAAAEALQDALKIQPSASLY 718


>gi|238501958|ref|XP_002382213.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus flavus
           NRRL3357]
 gi|220692450|gb|EED48797.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus flavus
           NRRL3357]
          Length = 938

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 120/335 (35%), Gaps = 47/335 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SIA      AR +++Y      F N   ++L     A  ER +       +++ +     
Sbjct: 549 SIARGKYETARAIYAYA--LRVFVNRRSIWL---AAADLERNHGTKEALWQVLEKAVEAC 603

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P + E  +  L  E  + G+++ A+R   +A + +P+   +  A V+    A++  +A  
Sbjct: 604 PQSEELWLL-LAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADARQTDQARE 662

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240
            L   ++ A         +   R L NAD+                              
Sbjct: 663 LLATARREAGTDRVWVKSVAFERQLGNADEALDLVNQGLQLYPKADKLWMMKGQIYESQN 722

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +        + C  S+   + A++         KA  +L++       P+ A ++T
Sbjct: 723 KYPQAREAYGTGTRACSRSVPLWLLASRLEEKAGAVVKARSVLDRARLAV--PKSAELWT 780

Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356
             +  E     + +A  L     +E   S ++ S+    LE  +  +A +      K+  
Sbjct: 781 ESVRVERRANNIAQAKILMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDN 839

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +F+ +A+I        +K + W + A+ +  D
Sbjct: 840 DPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 873



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 51/150 (34%), Gaps = 7/150 (4%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  +  +G    +      +L++  N     + AA    +   K     +LEK  +  P 
Sbjct: 546 AKASIARGKYETARAIYAYALRVFVNRRSIWLAAADLERNHGTKEALWQVLEKAVEACPQ 605

Query: 293 PEIANIYTHLLSE----NTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAK 347
            E   ++  L  E      + + +R L      N  + +  +   K+  +    DQA   
Sbjct: 606 SE--ELWLLLAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADARQTDQAREL 663

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
              A + A    +++     E+   +  + 
Sbjct: 664 LATARREAGTDRVWVKSVAFERQLGNADEA 693


>gi|39936977|ref|NP_949253.1| TPR repeat-containing protein [Rhodopseudomonas palustris CGA009]
 gi|39650834|emb|CAE29357.1| TPR repeat [Rhodopseudomonas palustris CGA009]
          Length = 715

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 92/275 (33%), Gaps = 11/275 (4%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            E  V L+  ++   + Q + A    + +L+       A++       + G+     +  
Sbjct: 19  YEPAVLLMRARVLHQQGQLDEARSAYKKVLKKAPDNFMALHFYALAEYQSGNAELGIKTL 78

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL   P +      +    +    ++ ++   ++             +    R L  +
Sbjct: 79  KRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTL----MLAYANRGLALS 134

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-- 295
                  +     ++++L  +          +L    +  +A    +K  +++P  ++  
Sbjct: 135 ALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGRYTEALESYDKAIEIDPLSDVAF 194

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              A  Y  L   +    L    R   I K  V++ +  ++  L M ++  A A     +
Sbjct: 195 MNRAGTYKDLKQLDKA--LASYDRALSIGKRPVQAGLARAETLLFMRNVKDAMATCTAVL 252

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           K+ P   I L L     A+  + +  +     AL 
Sbjct: 253 KVEPNSAIALTLLGNCMASLGDAETAIALHSRALE 287


>gi|91203185|emb|CAJ72824.1| hypothetical protein kustd2079 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 319

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 76/201 (37%), Gaps = 20/201 (9%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y L+ E+              K+L   PD      ++ + Y   +  S AI    +  K 
Sbjct: 58  YGLHNEAI---------ELFRKSLATDPDNIDTCISLGEVYADKRMDSEAIELFQKVLKI 108

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               N+ +A   I     + ++ +   +     +++++  +  +A      S     K  
Sbjct: 109 NP--NQPQAYFKIGTVYFDMEEYEP--AIEYLKKTIEMNPDYKVAYSLLGISYAKSGKYD 164

Query: 278 KAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A  +L+K  ++   P +A  Y++L     +  +    L    +   IN    E+L  ++
Sbjct: 165 EAVKVLKK--RIELDPNLAITYSNLGLVYTMKGSNKEALVEYNKALGINPYHEETLFNIA 222

Query: 333 KIALEMGSIDQAHAKAMLAMK 353
            +   MG ID+A A     ++
Sbjct: 223 FLYENMGQIDEALAYYNKTVE 243


>gi|326478910|gb|EGE02920.1| bimA protein [Trichophyton equinum CBS 127.97]
          Length = 801

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 70/198 (35%), Gaps = 15/198 (7%)

Query: 135 QYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            ++ A +      Q+     +   +     E     + + AQ     A+  +P       
Sbjct: 591 DHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYSAWY 648

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + Y    +    + F  +  + A   N    +L+ +  L    + ++ A+      +
Sbjct: 649 GLGKVYERMGK----LKFAERHLRTASNINSANVVLICSIGLVLERQNNLKAALLQYSRA 704

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLSENT 307
             L  +S++A +  A++L+  N+   A     +L+ +    P  H  +  +Y  +  +  
Sbjct: 705 SSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQDKGN 764

Query: 308 VGKLKRALRLEEINKESV 325
              +K       ++ ++ 
Sbjct: 765 A--IKHFTTALNLDPKAA 780


>gi|258592527|emb|CBE68836.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 622

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 94/302 (31%), Gaps = 23/302 (7%)

Query: 99  NIPLARKMHSYVSQQHTFHNE--YLVYLLEVQIALAERQYNIAHEKLEMMLQI----PAT 152
           ++P  R+ +  + ++    +           ++   E +   A       L +    PA 
Sbjct: 170 DLPAKRQRNIRLLKRQLTDHPEDPSAQFHLGEVYALEGKVGEAIACYRTALSLRGLPPAN 229

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           R  A  SL       G    A +    AL+                     +  AI  ++
Sbjct: 230 RSVARRSLAACLLNRGRFEEAWQECVAALEEDQGYAMPHLTGALALGRLGRYEAAIRQID 289

Query: 213 QKK-KNAKEWNRNRAIL------LIARSLE---NADKGDMIASYHDAIESLKLCDNSIMA 262
               K +++      +L        ARSL+       G +  +      +L    +S  A
Sbjct: 290 LYLDKVSRQGRGIHGVLGHISNPAYARSLKGNYLFALGQVDRAADCYTAALADDPDSPEA 349

Query: 263 SICAAKSLISQNKKRKAEVILEKI---WKVNPHP--EIANIYTHLLSENTVGKLKRALRL 317
            +   K    + + + A   LEK    ++  PH    +A  Y  L        L    + 
Sbjct: 350 HLGMGKVHKLRGQAQDAAASLEKAATLFERIPHGRLTLAECYAEL--GKWTEVLAACEQF 407

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +   +    L + ++  L++  + +A       +  AP    +  LA +    S+  + 
Sbjct: 408 LQACPDDKGGLELQAQALLKLNRLTEAEVTYRRLVTEAPSAMAYFALACLADGKSNRKEA 467

Query: 378 IL 379
             
Sbjct: 468 AR 469



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 71/265 (26%), Gaps = 44/265 (16%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           N      L+     A  Q + A +     +   P + E  +        R    ++A   
Sbjct: 311 NPAYARSLKGNYLFALGQVDRAADCYTAALADDPDSPEAHLGMGKVHKLRGQAQDAAASL 370

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             KA  +    P     + + Y    +W+  +    Q  +   +      +   A    N
Sbjct: 371 -EKAATLFERIPHGRLTLAECYAELGKWTEVLAACEQFLQACPDDKGGLELQAQALLKLN 429

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNPHPEI 295
                 +       E+          +  A   L      RK A     K W++      
Sbjct: 430 RLTEAEVTYRRLVTEAPSAM------AYFALACLADGKSNRKEAARFCRKAWEL------ 477

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                    E +  ++                  ++    +E G   +A    + A ++A
Sbjct: 478 ---------ERSDARI----------------PFLLGCCLIEAGEYREALDALLEAERLA 512

Query: 356 P----RKEIFLLLAQIEQANSHNTD 376
           P     +    LLA+  Q   H   
Sbjct: 513 PGTPEIERRLRLLARFVQRERHEVG 537


>gi|239995106|ref|ZP_04715630.1| TPR domain protein [Alteromonas macleodii ATCC 27126]
          Length = 604

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 79/205 (38%), Gaps = 16/205 (7%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
               +  R+ +   A++Y  K L    + P ++ A+   Y+  +    A++   QK    
Sbjct: 52  GSLRQVQRVKE---AEKYLVKGLKKFKNHPELSNALGNLYLSTRRIDLAVSTF-QKSSEL 107

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              N +    L   +    +K  +  +   A + L L  N +   +  A     Q+   +
Sbjct: 108 APNNVDLNYNL---ARALIEKNALKQARIAAEKVLALVPNHVQTKLIMADIFSKQSDFNE 164

Query: 279 AEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVS 332
           A ++L+ +  ++P        IAN+Y  +  E+    LK     L + N          +
Sbjct: 165 AIIVLKDVLAISPENIVALNNIANLYRKI--EDYEQALKHFELALSKTNANPTILRNYAA 222

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
            +AL     ++A    + A+K+AP 
Sbjct: 223 VLALSNQ-RERAEMVYLKALKVAPS 246



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 91/297 (30%), Gaps = 20/297 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQ------HTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
            + +   ++   +++     +          ++  L   L   + L+ R+ ++A    + 
Sbjct: 46  FIQLFCGSLRQVQRV-KEAEKYLVKGLKKFKNHPELSNAL-GNLYLSTRRIDLAVSTFQK 103

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
             ++        Y+L         L  A+  A K L + P+       +   +    +++
Sbjct: 104 SSELAPNNVDLNYNLARALIEKNALKQARIAAEKVLALVPNHVQTKLIMADIFSKQSDFN 163

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--AS 263
            AI  L      + E N      +     +  D    +  +  A+         +   A+
Sbjct: 164 EAIIVLKDVLAISPE-NIVALNNIANLYRKIEDYEQALKHFELALSKTNANPTILRNYAA 222

Query: 264 ICAAKSLISQNKK--RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           + A  +   + +    KA  +    W++    E+A     L  E             +  
Sbjct: 223 VLALSNQRERAEMVYLKALKVAPSDWELQE--ELAKF---LWEEGVDAPFVHIESYIKRQ 277

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDK 377
            E         ++ ++      A  +  L    A    EI  L A++ +    + + 
Sbjct: 278 PEDDSFRFRFIQLLIQADEYHAAKEQLDLLTTEAIKTHEIAPLRARVLR-ELGDYEA 333


>gi|315295811|gb|EFU55128.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3]
          Length = 1157

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273
            +                +L + +         +  E   +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++      I            + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K   I   +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738


>gi|163848374|ref|YP_001636418.1| hypothetical protein Caur_2828 [Chloroflexus aurantiacus J-10-fl]
 gi|222526297|ref|YP_002570768.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163669663|gb|ABY36029.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450176|gb|ACM54442.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 1113

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 47/281 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++++A ++   A++       ++        +LL  Q+A     ++ A      ++   
Sbjct: 553 GMVALARNDRESAQQWLRQALDRNNRFFPA--HLLLAQVAEDTGDWSSAINHWRALVNWQ 610

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T    V  L     R G    A  +A     + P A    EA ++              
Sbjct: 611 ETPYT-VVHLARALRRSG----ASGFAEAERLLVPLATEHVEATIEL------------- 652

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                                 +    D G    +     ++L L   S +A+    ++ 
Sbjct: 653 ----------------------ARLYNDAGYPNEAASVYRDALVLDPRSTVAAFELGETY 690

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVE 326
           I       AE +L      +     A +    L E  + +  RA+    I        ++
Sbjct: 691 IRLGDVATAERMLRDALTFDERNLDARLRLAELYEGPLNQPDRAIEQYRIALGQGVNDLD 750

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQ 366
            L+ + + AL   +   A      A+   P    +  LLA+
Sbjct: 751 QLIRIGQAALAGNATTVAIQALERALTGNPESATVNQLLAR 791



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 82/291 (28%), Gaps = 50/291 (17%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT--- 178
             +L   +IA        A +  +  +        A   L   +   G+   A  Y     
Sbjct: 828  AFLALAEIARRRNDLAAAEQAYQQAIATDPQSIPAHIGLGELAGGQGNWGVALAYFETAA 887

Query: 179  ---------------------------------KALDISPDAPWVTEAVVQQYVLAKEWS 205
                                             +AL++ P  P     + Q         
Sbjct: 888  ALPGGDTNAAAQFWLGEALLRNDNLVRALAAYQRALELQPQYPEALLGLAQTQYALGRAE 947

Query: 206  RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
             A+  + +  +    +    A   + R     + G    +      ++   D    +   
Sbjct: 948  EALQTVERAIQQKSNY----AEAHLFRGKLLQEAGRFAEARAAYDAAIGANDRIAESFYR 1003

Query: 266  AAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANI-YTHLLSENTVGKLKRALRLEE 319
             A   I   +  +A   L +   +  + PE    +    Y    SE+ +  +++A+ L  
Sbjct: 1004 RALLAIRNGEYDQAIRDLNRATALQANFPEAYYWLGRAYYAQGRSESALQAIQQAITL-- 1061

Query: 320  INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369
             N    E++     IA +  +   A       +   P  E     LAQIE+
Sbjct: 1062 -NPNYSEAIFYSGLIAEDQANFAAARDAYQTLISREPTSEWGQRALAQIER 1111


>gi|119331064|ref|NP_001073234.1| pre-mRNA-processing factor 6 [Rattus norvegicus]
 gi|118764149|gb|AAI28780.1| PRP6 pre-mRNA splicing factor 6 homolog (S. cerevisiae) [Rattus
           norvegicus]
 gi|149033912|gb|EDL88695.1| similar to RIKEN cDNA 1190003A07 (predicted) [Rattus norvegicus]
          Length = 941

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNITAAQE 696

Query: 229 LIARSL--------------ENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L              +  ++G+ M  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|190337484|gb|AAI63421.1| Prkri protein [Danio rerio]
 gi|190339858|gb|AAI63418.1| Prkri protein [Danio rerio]
          Length = 502

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 61/179 (34%), Gaps = 19/179 (10%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A + + A++  +       E +    +    R+      G   ++  D  ++++L  + 
Sbjct: 54  AAGQLAEALSHYHSAV----EGDSKNYLTYYKRATVFLAMGKSKSALPDLTQAIQLKPDF 109

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI-YTHLLSENTVGKLKR 313
           + A +     L+ Q   ++A    + +   +P     H ++        L E      +R
Sbjct: 110 LAARLQRGNILLKQGSTQEAREDFQAVLNHSPDHEEAHDQLLKADKLESLQEEAHEAHRR 169

Query: 314 ---------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                       + E++    ES  + ++  +++G   +A      A ++        L
Sbjct: 170 GDCRIAVQVLEHVIELSPWDPESRELRAECYIQLGEPRKAIMDLTPASRLRADNRAAFL 228


>gi|284050424|ref|ZP_06380634.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
 gi|291571117|dbj|BAI93389.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 730

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 6/205 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A  + +         N   VY+    ++    Q   A       L+       A 
Sbjct: 31  GDYDQA--IAACQKALELKPNWPPVYVTMGNVSQGRGQIQEAIRYYAKALEFDPNLPQAH 88

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L SA     KA+ + PD   V   + +        S A+    ++K +
Sbjct: 89  ANLGSMFYKQGQLESAIASYQKAIALKPDLTAVYVNLARALRQLGRESEALIV--EQKAH 146

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               +   AI L  +  +  ++G +  +     +++    N   A          Q + +
Sbjct: 147 QINSSTGGAIHLYNQGNQLVNEGKLEEAIALWKQAIVADPNLAEAYCQIGIIHRHQGQPK 206

Query: 278 KAEVILEKIWKVNPHPEIANIYTHL 302
           +A   LEK  ++   P     Y ++
Sbjct: 207 EAIPFLEKAIELK--PNFIAAYQNI 229



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 9/195 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GD + A     KAL++ P+ P V   +        +   AI +  +  +      +  A
Sbjct: 30  QGDYDQAIAACQKALELKPNWPPVYVTMGNVSQGRGQIQEAIRYYAKALEFDPNLPQAHA 89

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L          +G + ++     +++ L  +     +  A++L    ++ +A ++ +K 
Sbjct: 90  NL----GSMFYKQGQLESAIASYQKAIALKPDLTAVYVNLARALRQLGRESEALIVEQKA 145

Query: 287 WKVNPHPEIA-NIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSI 341
            ++N     A ++Y         GKL+ A+ L +          E+   +  I    G  
Sbjct: 146 HQINSSTGGAIHLYNQGNQLVNEGKLEEAIALWKQAIVADPNLAEAYCQIGIIHRHQGQP 205

Query: 342 DQAHAKAMLAMKIAP 356
            +A      A+++ P
Sbjct: 206 KEAIPFLEKAIELKP 220


>gi|224047792|ref|XP_002190494.1| PREDICTED: tetratricopeptide repeat domain 13 [Taeniopygia guttata]
          Length = 840

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 133 NGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEPDH 192

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        S A++ L +  +        R+R  L            D   +
Sbjct: 193 PEVFEQRAEILSPLGRISEALSDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 245

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D   SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 246 HEDFQRSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAY 304

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L + +     +   +   +N+  V++L +   +    GS+D+A       +++ P  E
Sbjct: 305 RELGNFDAAT--ESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNE 362

Query: 360 IFLLL 364
           +   +
Sbjct: 363 VCQYM 367


>gi|222099856|ref|YP_002534424.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
           4359]
 gi|221572245|gb|ACM23057.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
           4359]
          Length = 367

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 7/152 (4%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L ++  + K++       L   +LE AD+     ++      L +  N   A       L
Sbjct: 92  LEEEDISVKDFKNVSLKGLYDLALEYADRNLYDVAHDIIKFMLDIDSNYAPAYELKGSLL 151

Query: 271 ISQNKKRKAEVILEKI-----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           + Q K  +    L+K      W V  +  +   Y +L   +    +    R  E   +  
Sbjct: 152 VEQGKIEEGIKYLDKAVEIDPWLVQAYASLGEAYYNL--GDYEKAVHYWERELEYAPDDK 209

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +  ++++   EM   D A       ++  P 
Sbjct: 210 LTYFVLAEAYQEMNRKDLAARTLERLLERDPS 241


>gi|126741355|ref|ZP_01757031.1| Tetratricopeptide TPR_2 [Roseobacter sp. SK209-2-6]
 gi|126717560|gb|EBA14286.1| Tetratricopeptide TPR_2 [Roseobacter sp. SK209-2-6]
          Length = 831

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 79/222 (35%), Gaps = 8/222 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD  + + +  +      +      AVV      +    A+  L Q  K  +  +  
Sbjct: 270 QSRGDFETLEAFLRERAGPVEENFEGHMAVVALLAQTQGQEAALAELVQLAKANEASDLG 329

Query: 225 RAILLIARSLENADKGDMIASYH-DAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVI 282
           R  LL    L         +      I +     + +  A +  ++   +   + +A  +
Sbjct: 330 RQYLLQQMQLRFQAGEHEASMAEVTEIVAQGKDPDLVNEARMLLSRMKAATGDQEEARRL 389

Query: 283 LEKIWKVNPH--PEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +  + + +    P + A    H+  +     +       +    +  +L+++++   +MG
Sbjct: 390 VAAVLESDASNVPALSAQAAWHIREDKLSEAITGLRHALDQEPRNANTLLLLAEAQQKMG 449

Query: 340 SIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNTDKI 378
           +++ A  +   A++I   APR+ +     QI +      D++
Sbjct: 450 NVELAEQRLAQAVEITNGAPREALVYARFQIARGQLAAADRV 491



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALRLEEINKE 323
           A +L+ +    +A V L  ++  N  H E   +Y  L+    +      + LRL E   +
Sbjct: 55  ALALLEEGDTDRALVELRNVFDNNGLHREARQLYADLVLARGDAQEAYGQYLRLVEQYPD 114

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +VE  + ++++AL++G+ ++       A+++AP
Sbjct: 115 AVEVRLQLAELALDLGNWEEVKRHGGAAIELAP 147


>gi|58337268|ref|YP_193853.1| O-linked transferase [Lactobacillus acidophilus NCFM]
 gi|227903853|ref|ZP_04021658.1| tetratricopeptide repeat family protein [Lactobacillus acidophilus
           ATCC 4796]
 gi|58254585|gb|AAV42822.1| putative O-linked transferase [Lactobacillus acidophilus NCFM]
 gi|227868740|gb|EEJ76161.1| tetratricopeptide repeat family protein [Lactobacillus acidophilus
           ATCC 4796]
          Length = 415

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 97/263 (36%), Gaps = 30/263 (11%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172
           F +E L  +   +I L + + +     L ++  +P      + SL  ++      G + +
Sbjct: 62  FPHEDLFKVYLAEILLNDGEEDD---GLSLLYSVPEGSSAYLDSLLVQADYYQTSGLIET 118

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAIL 228
           A+    +AL I+P+   V   + +   L+ ++ +A+       +    +       R   
Sbjct: 119 AKDKLLQALKIAPEEDAVKFGLAELDYLSGDYEQALALYEDLIQRQNVFGEIDLNQRLFA 178

Query: 229 LIARSLENADKGDMIASYHDAIESL--KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             A+        D+I    D+I  +  K     +M S+             +A   L+++
Sbjct: 179 TNAKLGNYEKAADIIKKRGDSILDIDSKYEAGLVMLSV---------GDDDRAIKFLDEV 229

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGS 340
            + +P     +P +A  Y H    +    L+ A      N E  E+L  + ++ A  +  
Sbjct: 230 IQQSPDYVNAYPLLAQAYEH--KHDYTKVLRTAQAGLAYN-ELDETLYSMGARAAANLDE 286

Query: 341 IDQAHAKAMLAMKIAPRKEIFLL 363
           +  A       +K+AP      L
Sbjct: 287 LSTARELLEKGLKVAPDNSDLRL 309


>gi|53715218|ref|YP_101210.1| hypothetical protein BF3934 [Bacteroides fragilis YCH46]
 gi|52218083|dbj|BAD50676.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 320

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A    + + A +     L I       +  L     + G+   A     + + + P+   
Sbjct: 38  AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQLYIQTGEFGKAHELLERMIALEPELTS 96

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +     + +++         +K  A E     A  L+ ++    D G M  ++   
Sbjct: 97  TYLTLANLCFMQEDYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            +++ L D+   A +  A++L    +  +A   +E I   NP  E A +      +   G
Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211

Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           K + A      + EIN  + ++ + + ++ +    +  A      A+++ P
Sbjct: 212 KEEEAETDYLHVTEINPFNEQAYLYLGQLFITQKKLTAAIELFDEAIELNP 262


>gi|327303364|ref|XP_003236374.1| 20S cyclosome subunit BimA/Nuc2/Cdc27 [Trichophyton rubrum CBS
           118892]
 gi|326461716|gb|EGD87169.1| 20S cyclosome subunit BimA/Nuc2/Cdc27 [Trichophyton rubrum CBS
           118892]
          Length = 802

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +  ++ A +      Q+     +   +     E     + + AQ     A+  +P    
Sbjct: 589 LQSDHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYS 646

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               + + Y    +    + F  Q  + A   N    +L+ +  L    + ++ A+    
Sbjct: 647 AWYGLGKVYERMGK----LKFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQY 702

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLS 304
             +  L  +S++A +  A++L+  N+   A     +L+ +    P  H  +  +Y  +  
Sbjct: 703 SRASSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQD 762

Query: 305 ENTVGKLKRALRLEEINKESV 325
           +     +K       ++ ++ 
Sbjct: 763 KGNA--IKHFTTALNLDPKAA 781


>gi|262378887|ref|ZP_06072044.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|262300172|gb|EEY88084.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 570

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 97/315 (30%), Gaps = 37/315 (11%)

Query: 100 IPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
             +A   H   S      N     L   +  + ALA      A     ++     +    
Sbjct: 24  GSIASTAHLRASGDIYHENPNYNALKQSMIAEFALAYGDIPTALHNYTVLAIKSNSTTIK 83

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L   +    DL +A   AT  +   P        +    + A E+  A   LN+   
Sbjct: 84  QRAL-NVALEQNDLKAALDIATHWVVQEPQDVPALFYLAHISLKAHEYELAADTLNKILN 142

Query: 217 NAKEWNRNRAI----------------------------LLIARSLENADKGDMIASYHD 248
                +  + +                            +L+  +   A  G +  +   
Sbjct: 143 IDPNADLEQILAGIAPELPEDREILLNALRSSKEKNNPSILVLIAGLEAQNGQLEQALVT 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSE 305
             ++L+         +  A  L++QN +  A+  LEK  +   +     +A +   + S 
Sbjct: 203 INQALRKRPKVTGFILMKANLLMAQNDQLAAQQWLEKSSRKQKYNLDIRLAEVRFLVKSN 262

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLL 363
                LK+   + +   ++ E+L I    ++++   +QA    +        +    + L
Sbjct: 263 QAESALKKLQGILKQWPDAEEALFIAGLTSIDLKQYEQAEKYLVELRYSDQYQNEAYYYL 322

Query: 364 LAQIEQANSHNTDKI 378
               E+   + T K 
Sbjct: 323 AVNAERKQHYETAKA 337



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 11/123 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPA--- 151
             N   A  +     +     +  L+Y    Q+ L +  +      + L+ +L+I     
Sbjct: 396 TGNKKAALALLDEAVKN-LPDDPELIY---AQVLLLDPFQDREKLDQTLKHLLEIEPNSP 451

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           T   A    Y  + +   LN A++YA  AL+ +P+   + + +    +L  ++  A+  L
Sbjct: 452 TYLNAY--AYTLALQNRRLNEARQYAEHALEYAPEQASILDTLGYVCILQNDYDTAVRVL 509

Query: 212 NQK 214
            + 
Sbjct: 510 AKA 512


>gi|326387903|ref|ZP_08209509.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207949|gb|EGD58760.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 510

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 35/265 (13%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +    +   + A + L      P +    +      +   GDL  A     +AL I PD
Sbjct: 50  AEALFFQGDRDGARKVLAEGGFTPDSAGLGLRVKGQVALADGDLGGAGAAFDQALRIVPD 109

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P +  A+        E  +AI    +      +  R     L  R L   ++  + AS 
Sbjct: 110 DPDLWVAIASLRFTGGEQEQAIEASEKAVVLDPKNPR----ALALRGLLIREQYGLAASL 165

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
                +LK   +        A +L    + R A +I+                       
Sbjct: 166 PWFEAALKNHPDDPPLLDAYASTLGDLGQYR-AMLIV----------------------- 201

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
                    +L E++ ++    ++ + +A   G  + A +               +LL+ 
Sbjct: 202 -------CRKLAEVDPKNPRPFLLQAVLAARAGQTNLARSILQRTGTTYRDMPAAMLLSG 254

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
           + +  + N D  +   +  +   PD
Sbjct: 255 VLEYQAGNYDSSVGVLERLVRIQPD 279


>gi|196229049|ref|ZP_03127915.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196227330|gb|EDY21834.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 725

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 11/225 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             Q   A      +L +        + L   + +    + A  +  +AL++   +     
Sbjct: 19  AGQLREAEGIYRQILTVDPNHAEVHHLLGVIAHQCERESEAVNWIRRALELGLVSASAWS 78

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + Y     ++ AI       ++  ++    A L     L     G +  +     + 
Sbjct: 79  NLGEAYRALGRFAEAIEAYRAALRHNPQFGAAYANL----GLALRQNGQIGEAIEALRQG 134

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENT 307
           + L  + + A    A  L  Q +  +A      + +    P+ A+ +  L       E  
Sbjct: 135 IHLLPDHLDAHRNLAACLAEQGRLDEANAHYRLVLRRR--PDAADSWFDLGVVLTQQEKL 192

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              +    R  EI+ +  ++   +    ++ G  D A A    A+
Sbjct: 193 DEAIAAYRRAIEIDPQFAQAHHNLGAALVDRGDWDAAMAALRQAL 237


>gi|331659838|ref|ZP_08360776.1| cellulose synthase operon protein C [Escherichia coli TA206]
 gi|331053053|gb|EGI25086.1| cellulose synthase operon protein C [Escherichia coli TA206]
          Length = 1157

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 89/269 (33%), Gaps = 15/269 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++    I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ PE    Y 
Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536

Query: 301 HLLSENTVGK--LKRALRLEE--INKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351
             LS +   +  L     L     N    E  + +    V + A  +    +      + 
Sbjct: 537 LYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQVLETANRLRENGKEAEAEAML 596

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            +  P   I L LA   Q    +      
Sbjct: 597 RQQPPSSRIDLTLADWAQ-QRRDYTAARA 624



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/352 (13%), Positives = 106/352 (30%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273
            +                +L + +         +  E   +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++      I            + QA   NT     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGNTAAAQQ 692



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K   I   +      V          + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGNTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738


>gi|298244298|ref|ZP_06968104.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551779|gb|EFH85644.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
          Length = 517

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 86/274 (31%), Gaps = 38/274 (13%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
             A +I  A  + ++        ++ + Y              +A       +++  +  
Sbjct: 232 AEAGDIQKA--LSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIELNPSYF 289

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           +A+Y L      IGD   A     +A+++ P    +       Y    +W  AI    Q 
Sbjct: 290 WAIYKLADAYQEIGDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQS 349

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +    + R     +   ++   + GD   +     +++KL           A    ++ 
Sbjct: 350 IELNPSYFR----AIYNLAVAYQEIGDFEQALISYNQAIKLEP-------LKADIYNNRG 398

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
                            H ++  +Y  ++  +            ++N     +       
Sbjct: 399 NVY--------------H-KLGIVYQAIVDYSQS---------IKLNPSHPITYFNRGGS 434

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
             ++G+I+QA      A+++ P     +   AQI
Sbjct: 435 HAKLGNIEQAIEDYSRAIELDPSFANAYFSRAQI 468



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 58/166 (34%), Gaps = 10/166 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                  + +A       +++  +   A+Y+L      IGD   A     +A+ + P   
Sbjct: 332 AYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALISYNQAIKLEPLKA 391

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAILLIARSLENADKGDMIAS 245
                    Y         +  + Q   +   + + N +  I    R   +A  G++  +
Sbjct: 392 -------DIYNNRGNVYHKLGIVYQAIVDYSQSIKLNPSHPITYFNRGGSHAKLGNIEQA 444

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             D   +++L  +   A    A+   +  + ++A    +K +K+ P
Sbjct: 445 IEDYSRAIELDPSFANAYFSRAQIYDAIGELQQAIGDYDKAFKLKP 490


>gi|197120080|ref|YP_002140507.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197089440|gb|ACH40711.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 405

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 22/213 (10%)

Query: 77  HKRNYDKGYKALYTGL-------MSIAAHNIPLARKMH-SYVSQQHTFHNEYLVYLLEVQ 128
             +       AL +GL        + A   +  A  M  +                    
Sbjct: 22  DSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFL----------AS 71

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A+ + + A +  +  L +  T++    +L     +    N A+R    A  ++P   
Sbjct: 72  AYQAQGKTDEAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAEREFKDAAKLNPTDT 131

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                + Q YV  + +  A T   +  + A         L    + E    G    +   
Sbjct: 132 LAPYTLGQLYVQTERYGEAETQFKKVSRMAPTDPNPYYSLGAVYNKE----GKYADAVKQ 187

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +++KL      A      +  +      A+ 
Sbjct: 188 LTQAVKLRPKMEAAHFELGVAYAALGDTTNAQK 220



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 55/179 (30%), Gaps = 9/179 (5%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +        A   ++  L    K D   +  +   ++ +   +  A    A +  +Q 
Sbjct: 18  LASQDSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFLASAYQAQG 77

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           K  +A    +    ++P     H  + NIY      N   +        ++N     +  
Sbjct: 78  KTDEAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAER--EFKDAAKLNPTDTLAPY 135

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALH 387
            + ++ ++     +A  +     ++AP     +  L  +        D +      A+ 
Sbjct: 136 TLGQLYVQTERYGEAETQFKKVSRMAPTDPNPYYSLGAVYNKEGKYADAVKQ-LTQAVK 193


>gi|194335763|ref|YP_002017557.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308240|gb|ACF42940.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 1094

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 75/254 (29%), Gaps = 42/254 (16%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            +LL  Q      +   A      ++Q       A+  L   + +      +      AL
Sbjct: 31  AFLLHQQ-----GRLEEAEALYREIVQSDPEHFEALRLLAIIAVQKKRFEDSLVLFDHAL 85

Query: 182 DISPDAPWVTEAVVQQYV----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            I+P       A +            +  A+           ++    A   + R +   
Sbjct: 86  KINPRHA----ATLNNQGVVYEELHRFDEALCSYEHALAVKPDY----AEASLNRGVMLQ 137

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-----KRKAEVI--LEKIWKVN 290
           + G    +      +L    +        A+    +       KR  E +   EK   +N
Sbjct: 138 ELGRFDEAVLSYDHALTNDAD-------NARIWFHRGNVLQDLKRYGEAVFSFEKALAIN 190

Query: 291 PHPEIANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVSKIALEMGSIDQ 343
             P+ A  Y +L   N +  LKR         R   +N +SV + V       E+   ++
Sbjct: 191 --PDYAIAYANL--GNVLQDLKRYEEAVLSYDRAIAVNPDSVRAYVNRGIALQELKRYEE 246

Query: 344 AHAKAMLAMKIAPR 357
           A      A  I P 
Sbjct: 247 AVFSFEKACAINPD 260


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 70/204 (34%), Gaps = 13/204 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---PATRE 154
            ++  A ++++ + +     ++    +L    A     +  A    E M+     P    
Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIA-GACKAGNFEQASALFEEMVAKNLQPDVMT 604

Query: 155 FA--VYSLYFESCRIGDLNSAQRYATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITFL 211
           F   +  L    C+ G + +A+       ++  P       A+V     +     A  FL
Sbjct: 605 FGALIDGL----CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +   +    +       +  +L  A + D        ++S     +++  +I     L 
Sbjct: 661 EEMVSSGCVPDSI-TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV-DGLW 718

Query: 272 SQNKKRKAEVILEKIWKVNPHPEI 295
              +  +A  +LE++     HP++
Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDV 742


>gi|242278768|ref|YP_002990897.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638]
 gi|242121662|gb|ACS79358.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638]
          Length = 206

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 10/161 (6%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-- 185
             L++R +  A  +    + + P   E  V  L   + + GDL    RY   A    P  
Sbjct: 34  AYLSKRDFMEAEREFLVAIDESPKMAEAYVQ-LGGIAMQRGDLEGCLRYNITATQQRPFF 92

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             PW     V  Y+   E  +AI  L +  K    + +  + L  A      ++G++   
Sbjct: 93  AVPWGNIGYV--YMEQGETDKAIKALKRAIKYDPNFVQALSTLGAAY----FNEGELDDC 146

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                ++LKL DN   A    A     +   +KA   ++K 
Sbjct: 147 IEVCEKALKLADNFGPAWNNLALCYTEKEDYKKAIECVDKA 187


>gi|196228531|ref|ZP_03127398.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196227934|gb|EDY22437.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 630

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/277 (10%), Positives = 79/277 (28%), Gaps = 47/277 (16%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +   A      +L        A++ L   + ++G    A     KA+ ++P+      
Sbjct: 19  AGRLAEAEGLYRQILGAQPNHAGALHLLGVIADQVGRHEVAVELIQKAIALAPNVADFHS 78

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +         +  A+    +  +   +     A   +  +L    +G +  +      +
Sbjct: 79  NLGAAQRNLGRFDEAMAEFRRAIQLQPD--HADAHNNLGSAL--IAQGVLGEAVTVLRRT 134

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------------------- 291
           ++L      A      +L  + +  +A     +  ++ P                     
Sbjct: 135 IELRPTLAEAHNNLGIALGGEGRGEEAVAACRRAVELQPGYANGYNSLGVALVNQRELAE 194

Query: 292 -----------HPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
                      +P+    Y       +   +    +    R  EI     E+   +    
Sbjct: 195 AIAAFRRAIAVYPDYVEAYCNLGNALVDEGSLDEAVATCRRAIEIRPNHAEAHNNLGVAL 254

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKE------IFLLLAQ 366
           +  G++ +A      A+++ P +          L+A+
Sbjct: 255 IAQGALQEAGDAFRRALELQPNQAESHSNLSVTLMAE 291


>gi|116623755|ref|YP_825911.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226917|gb|ABJ85626.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 770

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 87/312 (27%), Gaps = 14/312 (4%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEM 145
           A    L  +                +      E  L +L   Q   A++         + 
Sbjct: 454 ARSRALSGLGRGAEARQELSRLAADRPRLLDAEVELAFLDLAQG-QAKKAETALRRFYQP 512

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            L    T E     L       G    A       L  + D P V  A+    V A+ W 
Sbjct: 513 GLPSSRTAE----GLARAIAAQGQPGKALELLQTELKQTHDRPSVLSALGDMAVAARNWD 568

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            AI    +  ++  +   + A L    +     KGD+  +      +  L   +      
Sbjct: 569 VAI----KAYEDLAQSRGSSAALEGRIAEVYEAKGDIDTALVRVRSARGLEPKNANLIAY 624

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYT---HLLSENTVGKLKRALRLEEIN 321
               L    ++ +A     +  + +P+  ++AN        +  N    L+ A       
Sbjct: 625 TGYLLEKSGRREEAIKEYRECLRTDPNRTDVANNLAFQLAEMGGNGAEALRLAEDCVRRQ 684

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
             +      +  +  + G  ++A +     +   P          +     ++  +    
Sbjct: 685 PRNTAYQDTLGWVYYKSGDFNRAASLLQQVVTADPGLAGSRYRLALAFVAKNDKTRARDE 744

Query: 382 TQSALHAMPDPL 393
            Q AL A   P 
Sbjct: 745 LQRALAANATPT 756



 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 65/227 (28%), Gaps = 17/227 (7%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            ++ + Y   A      +    + +        +   A     +  K            +
Sbjct: 292 TDAERHYREGAAKAPKQSADYEKKLATVLASQGKRDDAFAIAERLVKQNP----KDLSAI 347

Query: 230 IARSLENADKGDMIASYHDAIESLKLC---DNSIMASICAAKSLISQNKKRKAEVILEKI 286
             R+    + GD I           L      +    +   ++ I     + A+  LE+ 
Sbjct: 348 KLRAFLFLESGDKIKVRKALEVYQGLAVQQPGNAEIYLEEGRAYIGLEDLKSAKAALEQA 407

Query: 287 WKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            K+ P   +   Y    +L  ++    L  A  +         + +  S+    +G   +
Sbjct: 408 RKLAPGSPLILGYLVNVYLQMDSFTNALAAADEILISAPADPGAHIARSRALSGLGRGAE 467

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           A  +        PR    LL A++E       D      + A  A+ 
Sbjct: 468 ARQELSRLAADRPR----LLDAEVE---LAFLDLAQGQAKKAETALR 507


>gi|74211402|dbj|BAE26451.1| unnamed protein product [Mus musculus]
          Length = 941

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 104/301 (34%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                   + A  
Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQE 696

Query: 229 LIARSL--------------ENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L              +  ++G+ M  +     + LK C +S    +  ++     
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 815 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872

Query: 391 D 391
           D
Sbjct: 873 D 873



 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 83/227 (36%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R    +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKRRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495


>gi|189499558|ref|YP_001959028.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
 gi|189494999|gb|ACE03547.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
          Length = 571

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 86/237 (36%), Gaps = 11/237 (4%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  ++    +      A     +AL+I     +  E     Y+  +++ + ++ ++Q +K
Sbjct: 325 LRGMFLRVQKRYRDAGADFL--RALEIDSHNIFAWEEYASAYMSQEDYEQVVSTVSQARK 382

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES-LKLCDN--SIMASICAAKSLISQ 273
                +    +        + +    +     A+ S ++   +   + A I  A +    
Sbjct: 383 RTGRSSLRLDVFEGYALFRSENLRKSVDVLEKALSSEIEDKPSWLLVQAHITLAMAYDRL 442

Query: 274 NKKRKAEVILEKIWKVNPHPEIAN---IYTHL-LSENTVGKLKRALRLEEINKESVESLV 329
             + K+    + +  ++P   +A     Y +    EN    ++ A    E + ++   L 
Sbjct: 443 QDQLKSISAYKDVLSLDPENALALNNLAYLYAERGENLNEAIEYAKTAVESDPDNPVYLD 502

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSA 385
            +  +  + G   +A      A+   P + EI+  LA+I +A      +   + + A
Sbjct: 503 TLGWLYYKTGEYGKAREYLEKALAKDPDEPEIYDHLAEIYRALGK-ETRAKEFREKA 558



 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 4/127 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISP 185
                  +    +    + +L +      A+ +L Y  + R  +LN A  YA  A++  P
Sbjct: 436 AMAYDRLQDQLKSISAYKDVLSLDPENALALNNLAYLYAERGENLNEAIEYAKTAVESDP 495

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIA 244
           D P   + +   Y    E+ +A  +L +   K+  E      +  I R+L    +     
Sbjct: 496 DNPVYLDTLGWLYYKTGEYGKAREYLEKALAKDPDEPEIYDHLAEIYRALGK--ETRAKE 553

Query: 245 SYHDAIE 251
               A E
Sbjct: 554 FREKADE 560



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 20/138 (14%)

Query: 269 SLISQNKKRKAEVILEKI----------WK-VNPHPEIANIYTHLLSENTVGKLKRALRL 317
           +L      RK+  +LEK           W  V  H  +A  Y  L       +LK     
Sbjct: 398 ALFRSENLRKSVDVLEKALSSEIEDKPSWLLVQAHITLAMAYDRL-----QDQLKSISAY 452

Query: 318 EEINKESVESLVIVSKIALEMGSIDQ----AHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
           +++     E+ + ++ +A       +    A   A  A++  P   ++L         + 
Sbjct: 453 KDVLSLDPENALALNNLAYLYAERGENLNEAIEYAKTAVESDPDNPVYLDTLGWLYYKTG 512

Query: 374 NTDKILYWTQSALHAMPD 391
              K   + + AL   PD
Sbjct: 513 EYGKAREYLEKALAKDPD 530


>gi|294494031|gb|ADE92787.1| cellulose synthase operon protein C [Escherichia coli IHE3034]
          Length = 1140

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 452

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512

Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273
            +                +L + +         +  E   +L ++ +   +  A  L   
Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 569

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 570 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++      I            + QA   +T     
Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 675



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 567 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K   I   +      V        + + A    N+   +  +
Sbjct: 627 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 687 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 721


>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1337

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 21/199 (10%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---R 225
           D   A     KA++  PD                E+ +AI+  +Q  K   +++     R
Sbjct: 158 DWRGAIFSLEKAIEFKPDYHEAWLVRGSALGNLGEYEKAISSCDQAIKFKPDYHEAWANR 217

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + L          G+   +     +++K   +   A +    +L +  +  KA    ++
Sbjct: 218 GVALSYL-------GEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQ 270

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE-------INKESVESLVIVSKIALEM 338
             K    P++   + +    N +  L    +             +  E+ ++       +
Sbjct: 271 AIKFK--PDLHEAWNN--RGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYL 326

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  ++A +    A+K  P 
Sbjct: 327 GEYEKAISSYDQAIKFKPD 345



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 63/195 (32%), Gaps = 11/195 (5%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+   A     +A+   PD                E+ +AI+  +Q  K   +++   A 
Sbjct: 259 GEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPDYH--EAW 316

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+   +L     G+   +     +++K   +   A      +L +  +  KA    ++  
Sbjct: 317 LVRGVALSYL--GEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAI 374

Query: 288 KVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K    P+    +                +    +  +   +  E+         ++G  +
Sbjct: 375 KFK--PDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYE 432

Query: 343 QAHAKAMLAMKIAPR 357
           +A +    A+K  P 
Sbjct: 433 KAISSYDQAIKFKPD 447



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 63/197 (31%), Gaps = 15/197 (7%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+   A     +A+   PD                E+ +AI+  +Q  K   + +   A 
Sbjct: 225 GEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFKPDLH--EAW 282

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                +L N   G+   +     +++K   +   A +    +L    +  KA    ++  
Sbjct: 283 NNRGNALANL--GEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISSYDQAI 340

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEE-------INKESVESLVIVSKIALEMGS 340
           K    P++   + +    N +  L    +             +  E+          +G 
Sbjct: 341 KFK--PDLHEAWNN--RGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGE 396

Query: 341 IDQAHAKAMLAMKIAPR 357
            ++A +    A+K  P 
Sbjct: 397 YEKAISSYDQAIKFKPD 413



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 15/169 (8%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q+ ++ ++W  AI  L +  +   +++   A L+   +L N   G+   +     +++K 
Sbjct: 151 QRLLVNRDWRGAIFSLEKAIEFKPDYH--EAWLVRGSALGNL--GEYEKAISSCDQAIKF 206

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             +   A      +L    +  KA    ++  K    P++   +  L+  + +G L    
Sbjct: 207 KPDYHEAWANRGVALSYLGEYEKAISSCDQAIKFK--PDLHEAW--LVRGSALGNLGEYE 262

Query: 316 RLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +             +  E+          +G  ++A +    A+K  P 
Sbjct: 263 KAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPD 311



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 68/227 (29%), Gaps = 41/227 (18%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RN 224
           G+   A     +A+   PD                E+ +AI+  +Q  K   +++    N
Sbjct: 327 GEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYN 386

Query: 225 RAILL---------------------------IARSLENADKGDMIASYHDAIESLKLCD 257
           R + L                             R L   D G+   +     +++K   
Sbjct: 387 RGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKP 446

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
           +   A      +L    +  KA    ++  K+   P++   +++    + +  L    + 
Sbjct: 447 DYHEAWFVRGVALSYLGEHEKAISSYDQAIKIK--PDLHEAWSN--RGSALSHLGEYEKA 502

Query: 318 EE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                       +  E+          +G  ++A +    A+K  P 
Sbjct: 503 ISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPD 549



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 14/163 (8%)

Query: 134 RQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +Y  A     + +   P   E      L       G+   A     +A+   PD     
Sbjct: 497 GEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYL--GEYEKAISSYDQAIKFKPDYHEAW 554

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLIARSLENADKGDMIASYHD 248
                      E+ +AI+  +Q  K   + +    NR + L          G+   +   
Sbjct: 555 SNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYL-------GEYEKAISS 607

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +++K   +   A      +L    +  KA    ++  K  P
Sbjct: 608 YDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKP 650


>gi|260220727|emb|CBA28578.1| hypothetical protein Csp_A07860 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 425

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/408 (12%), Positives = 113/408 (27%), Gaps = 40/408 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   +    +  + + S +   +    V++ W       S  ++L  L        L   
Sbjct: 1   MRFALWLMALFGMAVASALFAGNNQGTVTLYWPPYRVDVSLNLVLLGLALAFVTLHLALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMH--------SYVSQ 112
                 S P               Y  L   +  + A     ARK          + +S 
Sbjct: 61  GISGLFSIPQQARRWRLSYKERTIYSGLLDTISHLVAGRFVRARKAAEVVVAVEDAMLSS 120

Query: 113 QHTFHNEY----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-------FAVYSLY 161
                +      L +LL  + A A +         +  L+   +++         + +  
Sbjct: 121 GDALPDAARLRTLAHLLAAESAHALQDRGTRETHFQRALEEAGSKDASDLRDGVQLRA-A 179

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +    D   A ++  +    +           +    A+    A+       K+    
Sbjct: 180 RWALEDRDSTGAVQWLEQLPVGTARRTIALRLRFKAARQARNTRVALDSARVLTKHRAFS 239

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--ASICAAKSLISQNKKRKA 279
               A ++   +LE        A    A  +L   +  +   A   A + L+ Q     A
Sbjct: 240 EVAGAGIVRGLALELLRGAHDAAQLEQAWGALDDVERLLPDVALEAAERLLLLQGDVATA 299

Query: 280 EVILEKIWKVNPHPEIANIY-----------THLLSENTVGK---LKRALRLEEINKESV 325
            + +  +W+       A  Y              +SE T      L R    +       
Sbjct: 300 RLWVLPLWQGQNPQASALSYEQRVRLVRLLERSFMSEETQPDGVWLSRIEAAQMAQPGDP 359

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAM----KIAPRKEIFLLLAQIEQ 369
               +   + + +    +A A    A+        ++  +L +A++ +
Sbjct: 360 LLQYLAGVLCVRLSLWGKAQALLRQAIPMLKDADMKRRAWLAMAELAE 407


>gi|182413817|ref|YP_001818883.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177841031|gb|ACB75283.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 776

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A +    +   +   +  L  LL  +      +   A       L+       A  
Sbjct: 609 DAITAHRNALRLRADYPEAHTELGLLLLSR-----GEPAEAETHFRAALRSAPELATAHL 663

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G  + A    T+A++++PD+P V     Q +   ++++ A+       + A
Sbjct: 664 GLARAAEQLGRADEATASFTRAVELAPDSPLVQRTAAQAFARRQQFAAAVE----HYQRA 719

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            E     A L           G           +L L     
Sbjct: 720 IELQPQDAALRAELGYALILSGRRADGIAAWKAALALDPTLP 761



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 39/357 (10%), Positives = 87/357 (24%), Gaps = 54/357 (15%)

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMS---IAAHN 99
                    L    +     +     P  LF              +   L++        
Sbjct: 415 TAAVTAVAVLLGGAIRTWEQQAVWRDPTTLFRHALAVTER---NEVGHALLAYTLATQSE 471

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATR-- 153
           +  A        + +  +   L  L    +   +     A E    +L+       T   
Sbjct: 472 LEEAAIHSRRALELNPRNRTALFTL--ASVLERQGHAGDAAELYRRVLELNPKDSDTEYR 529

Query: 154 ------------------EFAVYS--LYFESCRIGDLNSAQRYA-------TKALDISPD 186
                                     L  +    G  ++    A         AL ++PD
Sbjct: 530 LGLLLLRQRDPGAQQHLHAVGQRHPELVQQRIAEGMDHTLHGRAHLGLAQFEVALALNPD 589

Query: 187 APWVT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            P     A +    L ++   AIT      +   ++            L    +G+   +
Sbjct: 590 EPAAHFGAGLALAQLDRD-DDAITAHRNALRLRADYPE----AHTELGLLLLSRGEPAEA 644

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYT 300
                 +L+       A +  A++     +  +A     +  ++ P   +     A  + 
Sbjct: 645 ETHFRAALRSAPELATAHLGLARAAEQLGRADEATASFTRAVELAPDSPLVQRTAAQAFA 704

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +     ++   R  E+  +       +    +  G      A    A+ + P 
Sbjct: 705 --RRQQFAAAVEHYQRAIELQPQDAALRAELGYALILSGRRADGIAAWKAALALDPT 759


>gi|124267434|ref|YP_001021438.1| tetratricopeptide repeat-containing protein [Methylibium
           petroleiphilum PM1]
 gi|124260209|gb|ABM95203.1| putative membrane protein [Methylibium petroleiphilum PM1]
          Length = 389

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 78/256 (30%), Gaps = 20/256 (7%)

Query: 177 ATKALDISPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232
           A  A        + T+A +        +++W  AI    + +      +    A      
Sbjct: 132 AEAAFRALEGTAFATDARLDLLTLHERSRDWHAAIETARKLEAAGAGSFANRMAHYGCEI 191

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +LE   +     +     ++ +    +    + A + L    + R+A    +++    P 
Sbjct: 192 ALEADARRRPDEAEEALRKAREAAPQAPRPRVIAGQRLARAGQHREALSAWDELLATQPS 251

Query: 293 --PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH-AK 347
               IA+ Y +  L   +      R   + +         + +     ++     A   +
Sbjct: 252 AFALIASDYANSALACGDAADARGRLEAVYDRVPS-----LDIVTALQQLEPDPAARHER 306

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANS-----HNTDKILYWTQSALHAMPDPLWISDDGYLS 402
               ++  P       L + +QA        + +++   T +A   +      +  G+ +
Sbjct: 307 LRRHLQAHPTLSAASALLKEQQAQGLAPTSTDAEQLQQITAAAARPIRRFR-CAACGFEA 365

Query: 403 SVWLPLSPISKTLCYF 418
             +    P   +   +
Sbjct: 366 QHYFWQCPGCHSWDSY 381


>gi|194016938|ref|ZP_03055551.1| TPR repeat-containing protein YpiA [Bacillus pumilus ATCC 7061]
 gi|194011544|gb|EDW21113.1| TPR repeat-containing protein YpiA [Bacillus pumilus ATCC 7061]
          Length = 432

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 74/197 (37%), Gaps = 8/197 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  ++ A     A +  S + +        L   L  +    E  Y+ A E ++  ++I 
Sbjct: 220 GFTAMRAGRTKTAIQQLSEL-KDIDPSYSSLYMPL-AKSYEEEGLYHEALEVVKEGIKID 277

Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
              +E  +Y       + GD   A++   +AL + P      + ++  Y+  + +   + 
Sbjct: 278 EYNKELYLYG-AKIDLKNGDSEDAKKLLQEALALDPGYIEAVQTLLAIYLNEELFDEILD 336

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            + + K   ++  +       A S+   +  +    +  A+       + +      A  
Sbjct: 337 VIKEVKSFGEDDPKWNWYAASA-SVGREEYKEAAEYFKLALPDFDEERDFL---YEYASF 392

Query: 270 LISQNKKRKAEVILEKI 286
           L+ + ++++A  +L K+
Sbjct: 393 LLEEGRQKEALPLLRKV 409


>gi|293393855|ref|ZP_06638162.1| cellulose synthase subunit BcsC [Serratia odorifera DSM 4582]
 gi|291423682|gb|EFE96904.1| cellulose synthase subunit BcsC [Serratia odorifera DSM 4582]
          Length = 1157

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 99/319 (31%), Gaps = 59/319 (18%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N+ LA++ +    Q      + L+ L    +A+A      A    +
Sbjct: 355 WLAIDEGDKALKANNLSLAQQKYQQARQIDNADADALIGL--GDVAVARHDDAAAERYYQ 412

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRY------------------------ATKA 180
             L++      AV  L     R      A  Y                          +A
Sbjct: 413 QALRLDRGSGSAVRGLTNIYQRQS-PQKALAYLNGLPPAQRNKMRDTLDGLQLDMLKQQA 471

Query: 181 LDISPDAPWVTEAVVQQYVLAKE----W-----------------SRAI-TFLNQKKKNA 218
             ++    W   A + +    ++    W                 + A+   L QK+++ 
Sbjct: 472 EALAQRQQWHQAAEIYRQARLRDPDDVWLTYRYAQVLRQAGQPQQADALFNALVQKQRHD 531

Query: 219 KEWNRNRAILLIARSLENADKGDMIAS-YHDAIESLK-LCDNSIMASICA-AKSLISQNK 275
            +     A+ L +   ++     +         ++++ L     + +  A A+ L +   
Sbjct: 532 PQQVYAYALYLSSSDRDSQALAHLATLPRAQWNDNMRELAQRLQLQATLAQAERLRAGGD 591

Query: 276 KRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
              A   L    +  P     ++      L   +  G L    R+      + ++ +   
Sbjct: 592 SAAAVTYL----QRQPADTRIDLTLADWALADGDYAGALADYQRVRGREPNNPDARLGEI 647

Query: 333 KIALEMGSIDQAHAKAMLA 351
           +  +  G++  A  +   A
Sbjct: 648 EAYVAQGNMSAARQRLQTA 666



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 96/273 (35%), Gaps = 24/273 (8%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL     ++A +K +   QI      A+  L   +    D  +A+RY  +AL +   +  
Sbjct: 364 ALKANNLSLAQQKYQQARQIDNADADALIGLGDVAVARHDDAAAERYYQQALRLDRGSGS 423

Query: 190 VTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
               +   Y       +A+ +LN     Q+ K     +  +  +L  ++   A +     
Sbjct: 424 AVRGLTNIYQRQSP-QKALAYLNGLPPAQRNKMRDTLDGLQLDMLKQQAEALAQRQQWHQ 482

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +     ++     + +  +   A+ L    + ++A+ +   + +   H +   +Y + L 
Sbjct: 483 AAEIYRQARLRDPDDVWLTYRYAQVLRQAGQPQQADALFNALVQKQRH-DPQQVYAYALY 541

Query: 305 ENTVGK----LKRALRL--EEINKESVE-SLVIVSKIALEMGSIDQA---HAKAMLAMKI 354
            ++  +    L     L   + N    E +  +  +  L      +A    A A+  ++ 
Sbjct: 542 LSSSDRDSQALAHLATLPRAQWNDNMRELAQRLQLQATLAQAERLRAGGDSAAAVTYLQR 601

Query: 355 AP-RKEIFLLLAQIEQANS------HNTDKILY 380
            P    I L LA    A+        +  ++  
Sbjct: 602 QPADTRIDLTLADWALADGDYAGALADYQRVRG 634


>gi|156543124|ref|XP_001605583.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Nasonia
           vitripennis]
          Length = 1215

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 79/251 (31%), Gaps = 23/251 (9%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYAT-------KALDISPD 186
               A    +  LQ+      A+  L         D                +    + +
Sbjct: 213 NREKARCAYKRALQLDEKSVGALVGLAILKLNEFNDTQDQNSEYENSIKDGIQMFATAYN 272

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENADKGDMI 243
                  V+        + +      +   +A    E    RA      +     +GD  
Sbjct: 273 IDQTNPMVLNHLANHYFFKKDYKTTQRLALHAFHNTENESMRAESCYQLARSFQVQGDYD 332

Query: 244 ASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIAN 297
            ++    ++ +      ++      +  I +     A    EK+ K  P+       + +
Sbjct: 333 QAFQYYYQATQFASPVFVLPHYGLGQMYIYRGDNENAAQCFEKVLKAQPNNYETMKILGS 392

Query: 298 IYTHLLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +Y + ++++     K    ++ E + + VE+ + +++I LE   +      ++ A + A 
Sbjct: 393 LYANSVTQSKRDMAKTFLQKVTEDHPDDVEAWIELAQI-LEQSDL----QASLKAYETAT 447

Query: 357 RKEIFLLLAQI 367
           R     + A+I
Sbjct: 448 RILNEKIQAEI 458



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 96/259 (37%), Gaps = 31/259 (11%)

Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            ++  A+  ++ A +  + ++ + P   +  +  L   +   G +  A  +   AL I  
Sbjct: 513 ARVYEAQCMFDKAEKLYKNVLKEHPNYIDCYLR-LGCMARDKGQIYEASDWFKDALRIDN 571

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADK 239
           + P     +   ++  +EW        +  +N    N   +++ +             DK
Sbjct: 572 EHPDAWSLLGNLHLAKQEWGPGQKKFERILRNPSTNNDAYSLIALGNIWLQTMHQSGKDK 631

Query: 240 GDMIASYHDAIESLKL----CDNSIMAS-----ICAAKSLISQNK-----KRKAEVILEK 285
                    A+ + KL       +I A+     + A K  +++ +      R+A   L  
Sbjct: 632 DKEKRHQDRAMANYKLVLRNDPKNIWATNGVGCLLAHKGYMNEARDIFAQVREATSELPD 691

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +W       IA++Y       +  ++      +  + +   VE L  +++  L+ G + +
Sbjct: 692 VWLN-----IAHVYVEQKQYVSAIQMYENCLRKFYKYH--HVEILGYLARAYLKAGKLKE 744

Query: 344 AHAKAMLAMKIAPRKEIFL 362
           A    + A ++AP+  + L
Sbjct: 745 AKLTLLTARRVAPQDPVLL 763



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 29/262 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +    +  Y+ A +      Q  +       Y L       GD  +A +   K L   P
Sbjct: 322 ARSFQVQGDYDQAFQYYYQATQFASPVFVLPHYGLGQMYIYRGDNENAAQCFEKVLKAQP 381

Query: 186 DAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +     + +   Y       +   A TFL +  ++  +     A + +A+ LE +D    
Sbjct: 382 NNYETMKILGSLYANSVTQSKRDMAKTFLQKVTEDHPD--DVEAWIELAQILEQSDLQAS 439

Query: 243 IASYHDAIESL--KLCDNSIM-----ASICAAKSLISQNKKRKAEVILE--KIWKVNPHP 293
           + +Y  A   L  K+            +    +       + K    LE  K      HP
Sbjct: 440 LKAYETATRILNEKIQAEIPPEILNNIAAIQYRLECLDEARNKLTESLERSKA-DAEHHP 498

Query: 294 ------EIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQ 343
                  +   Y             +A +L     + +   ++  + +  +A + G I +
Sbjct: 499 SYYNSIAVTTTYNLARVYEAQCMFDKAEKLYKNVLKEHPNYIDCYLRLGCMARDKGQIYE 558

Query: 344 AHAKAMLAMK---IAPRKEIFL 362
           A      A++     P     L
Sbjct: 559 ASDWFKDALRIDNEHPDAWSLL 580


>gi|306816118|ref|ZP_07450256.1| cellulose synthase subunit BcsC [Escherichia coli NC101]
 gi|305850514|gb|EFM50971.1| cellulose synthase subunit BcsC [Escherichia coli NC101]
          Length = 1157

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273
            +                +L + +         +  E   +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++      I            + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K   I   +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738



 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|157692758|ref|YP_001487220.1| hypothetical protein BPUM_1990 [Bacillus pumilus SAFR-032]
 gi|157681516|gb|ABV62660.1| hypothetical protein BPUM_1990 [Bacillus pumilus SAFR-032]
          Length = 432

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 8/197 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  ++ A     A +  S + +        L   L  +    E  Y+ A E ++  ++I 
Sbjct: 220 GFTAMRAGRTKTAIQQLSEL-KDIDPSYSSLYMPL-AKSYEEEGLYHEALEVVKEGIKID 277

Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
              +E  +Y       + GD   A++   +AL + P      + ++  Y+  + +   + 
Sbjct: 278 EYNKELYLYG-AKIDLKNGDSEDAKKLLQEALALDPGYIEAIQTLLAIYLNEELFDEILD 336

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            + + K   +E  +       A S+   +  +    +  A+       + +      A  
Sbjct: 337 VIKEVKSFGEEDPKWNWYAASA-SVGREEYKEAAEYFKLALPDFDEERDFL---YEYATF 392

Query: 270 LISQNKKRKAEVILEKI 286
           L+ + ++++A  +L K+
Sbjct: 393 LLEEGRQKEALPLLRKV 409


>gi|308811592|ref|XP_003083104.1| putative pre-mRNA splicing factor (ISS) [Ostreococcus tauri]
 gi|116054982|emb|CAL57059.1| putative pre-mRNA splicing factor (ISS) [Ostreococcus tauri]
          Length = 1642

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 91/230 (39%), Gaps = 26/230 (11%)

Query: 164  SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +  I D+  A+      ++ +P     W+  A +++     +  +A TF    +K   E 
Sbjct: 977  AAEISDIKKARLLLKSVINTNPKHAPGWIAAARLEELA--GKLQQARTF---AQKGCDEC 1031

Query: 222  NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +N  + L A  L   +    I +       ++   NS+   I AA+  +   +KR    
Sbjct: 1032 PKNEDVWLEAARLNTPENAKAILAR-----GVQSLPNSVTIWIAAAQLEVEDERKR---R 1083

Query: 282  ILEKIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +L +  +  P+   +      L   ++    L RA    E   + VE  + ++++     
Sbjct: 1084 VLRRALENVPNSVRLWKALVDLSAEDDARVLLARA---TECCPQHVELWLALARLETA-- 1138

Query: 340  SIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388
              + A      A +  PR+ +I++  A++E+A + N   +      A+ +
Sbjct: 1139 --ENARKVLNKARETLPREPQIWITAAKLEEA-NGNGKMVEKIIARAVKS 1185



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 93/290 (32%), Gaps = 63/290 (21%)

Query: 160  LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            L     R   GD+  A+     A D +PD+  +  A  +      E +RA   L + ++ 
Sbjct: 1307 LMNAKERWLSGDVPRAREILQAAFDANPDSEEIWLAAFKLEFENGESARARILLAKARER 1366

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS------------------ 259
              +  R    + +  +L   + GD  A      E +++                      
Sbjct: 1367 LTDSER----VWMKSALVEHEAGDAKAERALLNEGIEMFPTFWKLWIMLGQLEEREGRAE 1422

Query: 260  ------------IMASICAAKSLIS-----QNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                          ++I    SL       Q    KA +ILE     NP  E       +
Sbjct: 1423 EAEQAYEKGTKKCPSAIALWISLSEFELRVQGNASKARIILETARTKNPANE-RLWLAAV 1481

Query: 303  LSENTVGKLKRALR-LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---APRK 358
              E   G ++ A   L    +E   S +++++ ++ M    Q  +K++ A+K     P  
Sbjct: 1482 RQERESGNVQIAESYLARAIQECPTSGLLLAE-SVRMAPRPQRKSKSVDALKRCDNDPYV 1540

Query: 359  EIFLLLAQIEQANSHNT--DKILYWTQSALHAMPDPLWISDDGYLSSVWL 406
                 +A +      +   DK   W   A+   PD         +   W 
Sbjct: 1541 -----IAAVAILFWSDRKLDKARSWWNRAVTIAPD---------IGDHWA 1576



 Score = 36.8 bits (84), Expect = 9.1,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 89/289 (30%), Gaps = 50/289 (17%)

Query: 129  IALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             A  E             +  +P +    V  L+     +   + A+    +A +  P  
Sbjct: 1071 AAQLEVEDERKRRVLRRALENVPNS----VR-LWKALVDLSAEDDARVLLARATECCPQH 1125

Query: 188  PWVTEAVVQQYVLAKE---WSRAITFL--------NQKKKNAKEWNRNRAILLIARSLEN 236
              +  A+ +           ++A   L           K      N      +IAR++++
Sbjct: 1126 VELWLALARLETAENARKVLNKARETLPREPQIWITAAKLEEANGNGKMVEKIIARAVKS 1185

Query: 237  ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI---------SQNKKRKAEVILEKIW 287
                 +       I   ++ +NS   S+   ++++          ++KKR         W
Sbjct: 1186 LKSHGVTIHRESWIREAEVAENSDPPSVATCRAIVKATIGEGVEEEDKKR--------TW 1237

Query: 288  KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-----VIVSKIALEMGSID 342
            K       A+    +  E+       A  +     +S  S      +  + +    G+ D
Sbjct: 1238 K-------ADAEECMKRESAET----ARAIYAHALDSGFSHKKGLWMKAAMLEKRFGTPD 1286

Query: 343  QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                    A+   P  EI  L+   E+  S +  +     Q+A  A PD
Sbjct: 1287 SVDEVLRKAVTFCPNAEILWLMNAKERWLSGDVPRAREILQAAFDANPD 1335


>gi|147921574|ref|YP_684609.1| hypothetical protein LRC308 [uncultured methanogenic archaeon RC-I]
 gi|56295578|emb|CAH04820.1| hypothetical protein orf20 [uncultured archaeon]
 gi|110620005|emb|CAJ35283.1| hypothetical protein LRC308 [uncultured methanogenic archaeon RC-I]
          Length = 423

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               +A+ ++PD       +        +   AI  L +       +    A        
Sbjct: 50  SLCREAVRLNPDYAEAYCLLGAALAGMGQSGDAIQALEKAITLQPGY----AEAHYYLGK 105

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                G+   + +    S +L  N  MA      +L  +   R++ V L +   V+  P 
Sbjct: 106 AVLATGNPDQALNLFTASKQLGMNESMACCGIGSALAEKGLYRESIVELSRAIAVD--PG 163

Query: 295 IANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
               Y  L      + +    +    +  E+N  ++E+ + +++  L     D A A+  
Sbjct: 164 NVEAYVRLGMACCETGSYAEAMAWLKKAVELNPGNIEAHLCLARAYLRGQMYDAALAEYD 223

Query: 350 LAMKIAPR 357
           + + + PR
Sbjct: 224 VVLGLRPR 231


>gi|239908595|ref|YP_002955337.1| hypothetical protein DMR_39600 [Desulfovibrio magneticus RS-1]
 gi|239798462|dbj|BAH77451.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 209

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 6/168 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +A+ +   A  +    ++   +       L   +   GDL++   +  KA    P   
Sbjct: 35  AYVAKGRLIEAEAEFHQAVECSPSLAEGYVQLGGLAMNKGDLDACLEWNEKACRARPLFA 94

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   ++   E  +A   L +  K  +++ +  A L  A  ++    G + A+ + 
Sbjct: 95  VPYGNIGFVHLQRGEIDKAEKALRRAIKIDEKYVQALATLGSALFMQ----GKLEAAENF 150

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV--NPHPE 294
           + ++L +      A    A   + +    KA+ ++ +       PHP+
Sbjct: 151 SQKALAIEPQFGPAINNLALVAMERGDFAKAQELVTQARATGYEPHPD 198


>gi|162448522|ref|YP_001610889.1| hypothetical protein sce0252 [Sorangium cellulosum 'So ce 56']
 gi|161159104|emb|CAN90409.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
            cellulosum 'So ce 56']
          Length = 3746

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 104/337 (30%), Gaps = 60/337 (17%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ----------YNIA---HEKLE 144
             +    R+    ++++     E +  +L   IA  E               A    E   
Sbjct: 3179 GSAGELRREAKELAERALGDRELVEAILREMIAADEGDTWALAELTKVREEAGDHKEVFR 3238

Query: 145  MMLQIPATREFAVYSLYFESCRI---------------GDLNSAQRYATKALDISPDAPW 189
            ++++           LY E+ RI               GD  +A        +  P    
Sbjct: 3239 LLVRQSE--------LYAEAERIRDARHAAAAVARERLGDDAAAIELYETLFEADPGDAR 3290

Query: 190  VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               A+ + Y  A +    +  L +    A+      A+ L +  +  +    +  +    
Sbjct: 3291 AATALRELYAKAGKHKELLALLERLTDLAESPEARSALRLESAEICLSRLDAVSEATEHL 3350

Query: 250  IESLKLCDNSIMASICAAKSLISQNK---------------KRKAEVILEKIWKVNPHPE 294
               L    ++  A++  A+ L    +               K + +V  E  + V     
Sbjct: 3351 RAVLDEQPDNEKATVLLAQLLEKTGRDQELSDLFVTQIERAKDRGDVAAELSYSVR---- 3406

Query: 295  IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            +  +Y      +T   ++    + E       +L+ ++++  + G   +A  +  + ++ 
Sbjct: 3407 LGEVY-EARLNDTARAIETYRAVLEREPRHHGALLALARLHEQRGEKAEAAQRLEVILED 3465

Query: 355  APRK---EIFLLLAQIEQANSHNTDKILYWTQSALHA 388
            A         L LA + ++   +   +    +  L A
Sbjct: 3466 ARAAEAVGTALRLADLHRS-LGDEGAVRRVLERGLAA 3501



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 12/234 (5%)

Query: 134  RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                 A E    +L+       A+ +L     + G+   A +     L+ +  A  V  A
Sbjct: 3416 NDTARAIETYRAVLEREPRHHGALLALARLHEQRGEKAEAAQRLEVILEDARAAEAVGTA 3475

Query: 194  V--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            +     +    +       L +           R  LL     + A          DA  
Sbjct: 3476 LRLADLHRSLGDEGAVRRVLERGLAADGSAQEIRKQLLALYEKQQAFTELADLITGDAEA 3535

Query: 252  SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310
            + +  +   +    A   L  +N   +A  +L K  ++ P   E+        S +  G+
Sbjct: 3536 AAQPAEKVALYRKAAGIHLAKRNDPGRAADLLVKATELVPGDRELLLALCDAYSASGRGQ 3595

Query: 311  LKRALRLEEI--------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             K A  L++I        +K+       ++K  L  G  ++A A+  +A KI P
Sbjct: 3596 -KAAEALQQIVESYGGRRSKDLAAIHHRLAKAYLAEGQRERALAELDIAFKIDP 3648



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 63/203 (31%), Gaps = 13/203 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             R+ D   A     + LD+SP        + + Y  A +W R +     + ++      
Sbjct: 237 KARLSDPARAVAAYEELLDLSPGQAEALSFLTEAYSAAGDWDRLVALYEDQLRSGGVKPG 296

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS----QNKKRKA 279
               +L+  ++ +        +     + ++  D    A              +  K + 
Sbjct: 297 EELGMLVQIAMVHWRMRGQPQAAEPYFDRVRRAD---PAHAGMLNFYREVLEQRGDKPRL 353

Query: 280 EVILEKIWKVNP----HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333
             IL    +  P       IA     L    EN    +++   +   + E+ ++   + +
Sbjct: 354 TTILTDAQRAVPDGPEKRAIATELARLAESQENAAKAIEQYKSVLRTDPENRQARDALKR 413

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
           + L+    +         ++  P
Sbjct: 414 LYLQTEGYNALVELHRQDLERTP 436



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 69/227 (30%), Gaps = 8/227 (3%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             ++GD   A+ Y  + L + P+     E + Q    A+ W       ++  K   + +  
Sbjct: 1211 EQLGDPEGAKPYLERVLSLDPNNHRAFERLKQILTAAERWGELEELYDRAAKGTTDQSER 1270

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              +L     +     GD   +       L+L      A     K    + + R    +LE
Sbjct: 1271 IELLNEVALIAEEIIGDAAKAIGYYERILELDPFYTAALDSLEKLYEREGRFRDLAALLE 1330

Query: 285  KIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            +  K     E       + +IY         G L     +  I +   ++  +V ++   
Sbjct: 1331 QRLKTATEAESVEIKLSLGSIYLD-RLHEPEGSLGHLEDVLRIRQNDPKARELVERLLDI 1389

Query: 338  MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
                 +A        +        + + +I +  +    +     + 
Sbjct: 1390 GALRLRAARVLEAVYEARDEIRQLVRVLEIRRQGAETESERRELLRR 1436



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 8/171 (4%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            GD+  A R+  +A +  PD+  + +A+    V     +  I          K+ +R  A 
Sbjct: 2207 GDVADALRWYRRAHEFEPDSRELFDAIDGLLVKEGRHAERIQLYRAALDYRKDEDRLDA- 2265

Query: 228  LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKI 286
            L     LE  +  +   +      +L + +N   A     +     ++ R  A++ L + 
Sbjct: 2266 LHTIARLERTELREPALAIETYRAALDVDENDARALDALTELYRELDRPRDLADLYLRRA 2325

Query: 287  ------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
                   +  P+            E+T G + +   +        E++  +
Sbjct: 2326 EAAPNGERAAPYRLALAALLRTRLEDTSGAIDQLEAIVGEVPSHAEAIRAL 2376


>gi|325915998|ref|ZP_08178291.1| putative N-acetylglucosaminyl transferase [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537808|gb|EGD09511.1| putative N-acetylglucosaminyl transferase [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 392

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 92/305 (30%), Gaps = 31/305 (10%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++Q        R  A+ +L  +  + G L+ A+   T+   +   AP 
Sbjct: 88  GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147

Query: 190 VTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y   ++W +AI      ++   +   +  +      +      G    +   
Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATCYEEVTGEPMGKLISQFECELADRYRGLGKADEALQA 207

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302
              + +    S+ A I   +    +     A    E+  + +P       P +   Y  +
Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267

Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                   +  A        E    +   + ++++      +  A A     +K  P   
Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321

Query: 360 IFLLLAQIEQANSHNT----DKILYWTQSALHAMPDPLWISDD---GYLSSVWLPLSPIS 412
               L  +  A   +     + + + T   L  + +P +       G  +  W    P  
Sbjct: 322 GESALIDLTLAEGSDPVGTLNDLKHITDQLL--VRNPSYRCTRCGFGAKTHHWQ--CPSC 377

Query: 413 KTLCY 417
           K    
Sbjct: 378 KEWGT 382


>gi|260913656|ref|ZP_05920132.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632195|gb|EEX50370.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 396

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 106/348 (30%), Gaps = 78/348 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151
             +  A ++H  + +   +  E    LL  Q     +       Y+ A     +++  P 
Sbjct: 91  GEVDRALRIHQALDRNPDYSFEQ--KLLAKQ--QLAKDFMAIGFYDRAENLYILLVDEPD 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                                   +A  AL          + + Q Y   KEW +AI   
Sbjct: 147 ------------------------FAEHAL----------QQLAQLYQKTKEWKKAINVT 172

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K A + +           ++     +   S     ++LK+    + ASI   + LI
Sbjct: 173 EKLAKIAPKDDNVELAQYYCEYVKTLAINNKENSQTLLEQALKVSPKCVRASIQLGELLI 232

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            + + + A  ILE +                + E  V   K   +L ++  E+ E  +I 
Sbjct: 233 EKGEYQSAVNILENVLVQK---------ADYVGEILVPLRKCYHKLNQL--ENFEIFLIK 281

Query: 332 S---------KIALE--MGSID---QAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNT 375
           +         ++AL   +  ID    A AK    +   P   +F   +  QI+ A     
Sbjct: 282 ASQLVNNSAVELALVDLIQEIDGKTAAQAKLYQQLNRHPTALLFHRFIQFQIDDAEVGRG 341

Query: 376 DKILYWTQSAL--HAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            + L      +  H      +        +    W    P  ++    
Sbjct: 342 KESLELLHKMVGEHIKQGTGYRCVKCGYHAHKLIW--CCPSCRSWETI 387


>gi|167910011|ref|ZP_02497102.1| hypothetical protein Bpse112_05926 [Burkholderia pseudomallei 112]
          Length = 105

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 1/103 (0%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V I +       S    +  +         L  
Sbjct: 3   LRGIIWLAVLFAIAAALATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA 103
           + R     P  +     +   ++   AL   L ++ A     A
Sbjct: 63  IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRA 105


>gi|56460460|ref|YP_155741.1| tetratricopeptide repeat protein [Idiomarina loihiensis L2TR]
 gi|56179470|gb|AAV82192.1| Predicted N-acetylglucosaminyl transferase [Idiomarina loihiensis
           L2TR]
          Length = 385

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 37/304 (12%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-- 187
            + + A +  + +  +P      R  A+Y L  +    G  + A++    A   S     
Sbjct: 83  GEVDRAIKIHKNLTSLPNLSEHDRLTAMYELGKDYLSAGIYDRAEQMF--AGLQSYKLFR 140

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               + +++ Y    EW +AI       + AK+ +  R +L            ++ +   
Sbjct: 141 EKSQKHLLELYESTHEWDKAIKI---ALRLAKQSSHARVVLAQLYCELAELDDNVPSKIK 197

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNK----KRKAEVILE--KIWKVNPHPEIANIYTH 301
              ++LK   N + A +   K  + + +          + E  K +     P +   Y  
Sbjct: 198 HYSKALKHDSNCVRAVLSLGKIHMKEGEYGESINYLTRVFEQDKSFVCETIPLLEEAY-- 255

Query: 302 LLSENTVGKLKRALRLEEINKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
              E T         L    + +    + + +S+   E  SI+ A       ++  P   
Sbjct: 256 ---EKTSDTHTFIEFLHSCVEHNAGITAAITLSEKICESQSIEDAEHFMTHVLEQHPTMR 312

Query: 360 IF-LLLAQIEQANSHNTDKILYWTQSALHAMPD-----PLWISDDGYLSSV---WLPLSP 410
            F  L+    +A   +        +     + +     P +       S     W    P
Sbjct: 313 GFHHLMGLHIRA--ADVGNARDSLRRLRKMVHEHIVQRPNYKCRHCGFSGHTLYWR--CP 368

Query: 411 ISKT 414
             K+
Sbjct: 369 SCKS 372


>gi|323529611|ref|YP_004231763.1| cellulose synthase operon C domain-containing protein [Burkholderia
           sp. CCGE1001]
 gi|323386613|gb|ADX58703.1| cellulose synthase operon C domain protein [Burkholderia sp.
           CCGE1001]
          Length = 1616

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 73/215 (33%), Gaps = 26/215 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G M +A H+   A + +    ++   + + +  L+    A        A +    +    
Sbjct: 407 GEMLLANHDAAGAEQAYRMALRRQADNPDAIRGLVGALAAQGRGD--EALQFANQLNAEQ 464

Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            ++      +      +        GDL SA+     AL  +PD PW+   + + YV   
Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-----------MIASYHDAIE 251
             + A + ++       +        L A +L +A+  D             A   DA+ 
Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQLERIPAAQRTDAMA 580

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           SL+        +  AA+      + ++A  +L   
Sbjct: 581 SLQHRLWVHQQAELAARM-AKSGQLQQALAMLRAA 614



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 4/134 (2%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL SA       L   PD P +  A+ + Y  A +   A+       +   +    
Sbjct: 711 RQRGDLASAYDVIAPWLAAMPDNPDLQAALGRLYATAGDDRNALESYRVALRRKPD---- 766

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              LL A     +       +   A E+L    N         +   +Q K   A   L+
Sbjct: 767 DLNLLQAAISAASGARQFSYAESLAKEALNAAPNDPGVLATVGRMYRAQGKLSLASTYLQ 826

Query: 285 KIWKVNPHPEIANI 298
           +       P +AN 
Sbjct: 827 RSLVAANTPLMANA 840



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 59/225 (26%), Gaps = 32/225 (14%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE-WSRAITFLNQKKKNAKE---- 220
           + G   SA +   +AL   P  P +     Q      + W  A   L Q  ++  +    
Sbjct: 133 QSGQSASAVQEYQRALSGKPATPELQLEYYQALSATPQGWDEARRGLEQLARDNPDDPRY 192

Query: 221 ------------WNRNRAIL----LIARSLENADKGDMIASYHDAIESLKLCDNSIMA-- 262
                         R   I     L   S   A            +++         A  
Sbjct: 193 ALAYAQHLTYRDVTRRDGIARLQKLAGDSTVGASAKKSWRQALLWLDARPSDSALYQAYL 252

Query: 263 ------SICAAKS--LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
                 +   A+   ++ Q++  +             H  IA+ +  L   +      + 
Sbjct: 253 QSAGDDAAVKARFDSMVQQDRSTRERAQENAAVDARGH-LIADGFAALDRNDPTAARAKF 311

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +   +    ++L  +   AL+     +A      A +      
Sbjct: 312 SSVLASSPNDTDALGGMGIAALKQEHFAEARNYLERASRNGNPAR 356



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 90/324 (27%), Gaps = 46/324 (14%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-------LEVQ--IALAERQYN 137
           ALY   +  A  +  +  +  S V Q  +                L      AL      
Sbjct: 246 ALYQAYLQSAGDDAAVKARFDSMVQQDRSTRERAQENAAVDARGHLIADGFAALDRNDPT 305

Query: 138 IAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW------ 189
            A  K   +L      T       +   + +      A+ Y  +A      A W      
Sbjct: 306 AARAKFSSVLASSPNDTDALGGMGIA--ALKQEHFAEARNYLERASRNGNPARWKTALDS 363

Query: 190 ------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                  ++A +       E ++A +   +        +    +LL    L N D     
Sbjct: 364 ATYWTYTSDA-IGARS-NGELAKAKSLFERAIAMNP-SDVTAQVLLGEMLLANHDAAGAE 420

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +Y  A+       ++I   + A  +    ++  +    L    +       A     L 
Sbjct: 421 QAYRMALRRQADNPDAIRGLVGALAAQGRGDEALQFANQLNAEQQSK-----AGGINRLR 475

Query: 304 SENTVGK---------LKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAML 350
            E    +         L  A  L E       +     + +++I +  G++  A +    
Sbjct: 476 GEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQGAVANARSMMDG 535

Query: 351 AMKIAPRKEIFLLLAQIEQANSHN 374
            +   P     L  + +  A + +
Sbjct: 536 LLAAHPDMTDALYASALLSAETQD 559


>gi|251789345|ref|YP_003004066.1| tetratricopeptide repeat-containing protein [Dickeya zeae Ech1591]
 gi|247537966|gb|ACT06587.1| Tetratricopeptide domain protein [Dickeya zeae Ech1591]
          Length = 389

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 91/291 (31%), Gaps = 56/291 (19%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  +++  +   E    LL VQ      +    Y+ A E  + ++     R
Sbjct: 83  GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMVAGLYDRAEEIFKQLVDEEDFR 140

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+                                  + ++Q +    +W  AI    +
Sbjct: 141 VSAL----------------------------------QQLLQIHQSTSDWPNAIDTAEK 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K   R+  A     ++L+     D+  +     ++          SI   +  ++
Sbjct: 167 LVKLGKTQLRSEIAHFYCEQALQAMGSDDLDKAVAMLKKASATDSQCARVSIMLGRIYMA 226

Query: 273 QNKKRKAEVILEKIWK------VNPHPEIANIYTHL-LSENTVGKLKR-ALRLEEINKES 324
           Q    +A  +L+++            P +   Y +L   E     L+R        + + 
Sbjct: 227 QQNYPQAVAMLQQVLDQDTELVSETLPLLQECYRYLQQPEGWAAFLRRCVEEKSGSSAD- 285

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373
               ++++ +  +  S + A       ++  P   +F  L    + +A   
Sbjct: 286 ----LMMADVLEQYESTESAQTYVTRQLQRHPTMRVFHRLIDYHLREAEDG 332


>gi|224540741|ref|ZP_03681280.1| hypothetical protein BACCELL_05655 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517640|gb|EEF86745.1| hypothetical protein BACCELL_05655 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 274

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 17/211 (8%)

Query: 164 SCRIGDLNS-AQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKN 217
           +C   D  + A+ Y  +AL + P  P    A++           +++ +A+         
Sbjct: 32  ACTEQDSLAQAENYIRQALKLEPANP--HNALLFSNLGTIQRRQRDYDQALESYTYALNI 89

Query: 218 AKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           A      RA+ +L+ R+  N + G    +  D    L L  ++  A +  A   ++Q   
Sbjct: 90  AP-----RAVPILLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQRDL 144

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIA 335
           + A    E++ K++P    A +    L +      K    L ++  E  + + + V++  
Sbjct: 145 KFARADYERLLKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAG 204

Query: 336 L--EMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +  +M  +D A      A+K+ P +    L+
Sbjct: 205 IEQDMQHVDLAMIDLEEALKLNPSQTEAYLM 235



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 7/165 (4%)

Query: 124 LLEVQIALAE-RQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL       E  +   A     ++L      RE  +   Y    +  DL  A+    + L
Sbjct: 97  LLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQR-DLKFARADYERLL 155

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P        +           +A+  LN+            A L +AR+    D   
Sbjct: 156 KLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDP----QDAALYVARAGIEQDMQH 211

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  +  D  E+LKL  +   A +   +  +SQ KK  A+   EK 
Sbjct: 212 VDLAMIDLEEALKLNPSQTEAYLMRGQIYLSQKKKNLAKQDFEKA 256



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 63/172 (36%), Gaps = 13/172 (7%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           ++A  ++ Q  K  +  N + A+L          + D   +      +L +   ++   +
Sbjct: 40  AQAENYIRQALK-LEPANPHNALLFSNLGTIQRRQRDYDQALESYTYALNIAPRAVPILL 98

Query: 265 CAAKSLISQNKKRKAEVI-------LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
             A   +   +  +A  +       LEK  +      +   Y ++   +         RL
Sbjct: 99  NRAALNLEMGRNEQA-RVDYSLVLDLEKDNREA---LLMRAYIYVTQRDLKFARADYERL 154

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIE 368
            +++ ++  + + ++ +  + G++ +A       +   P    +++  A IE
Sbjct: 155 LKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAGIE 206


>gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
 gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
          Length = 357

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 85/221 (38%), Gaps = 13/221 (5%)

Query: 136 YNIAHEKLEMMLQIPATREFA--VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           Y+IAH+ ++ ML I      A  +   L  E    G +    ++  KA++I P       
Sbjct: 113 YDIAHDIIKFMLDIDENYAPAYELKGSLLVE---QGKIEEGIKFLDKAVEIDPWLVQAYA 169

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++ + Y    ++ +AI +  ++     E+N +  I     +    +      +       
Sbjct: 170 SLGEAYYNLGDYEKAIHYWEREL----EYNPSDKITYFMITEAYHEMNRKDLAVKALERL 225

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVG 309
           L++  ++I A    ++       + KA  + EKI    P +P     +    L       
Sbjct: 226 LEIDPDNIPALYQLSQLYRELGSEEKAREMEEKIMNCKPKYPTELEPWARVMLKHGRYKE 285

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            ++   ++ E +  +  + +++    +++G ID+A      
Sbjct: 286 VVEELEKIVESSPLNTLARLLLVVPYVKLGQIDKAREILDD 326



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286
           L   +LE AD+     ++      L + +N   A       L+ Q K  +    L+K   
Sbjct: 100 LYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLDKAVE 159

Query: 287 ---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
              W V  +  +   Y +L   +    +    R  E N     +  ++++   EM   D 
Sbjct: 160 IDPWLVQAYASLGEAYYNL--GDYEKAIHYWERELEYNPSDKITYFMITEAYHEMNRKDL 217

Query: 344 AHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
           A       ++I P        L+Q+ +    + +K   
Sbjct: 218 AVKALERLLEIDPDNIPALYQLSQLYR-ELGSEEKARE 254



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 65/172 (37%), Gaps = 17/172 (9%)

Query: 199 VLAKEWSRAITFLNQKKKNAK--------EWNRNRAILLIARSLENADKGDMIASYHDAI 250
            L   +  A+ + ++   +          + + N A     +     ++G +        
Sbjct: 96  SLKGLYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLD 155

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLS 304
           +++++    + A     ++  +     KA    E+  + NP  +      I   Y  +  
Sbjct: 156 KAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPS-DKITYFMITEAYHEMNR 214

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++    +K   RL EI+ +++ +L  +S++  E+GS ++A       M   P
Sbjct: 215 KDLA--VKALERLLEIDPDNIPALYQLSQLYRELGSEEKAREMEEKIMNCKP 264


>gi|118365236|ref|XP_001015839.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89297606|gb|EAR95594.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 430

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 75/248 (30%), Gaps = 27/248 (10%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYA 177
            YL    I       N A +  +  ++       T       +      + +        
Sbjct: 141 SYLFLADINEQMNNLNQAKKCYQEAIKINPKDDQTYLKL--GILNLKMELFEDTKQCYL- 197

Query: 178 TKALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            +AL I+         +      +        +     +   A E +   AI  +     
Sbjct: 198 -EALKINTLNTQAHNYLGLFYLQIKK------LKEAKNQILKALEIDPQLAITYVNLGKV 250

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
             ++  +  +    +++LK+      A I   K    Q +   A     K  +++P    
Sbjct: 251 YEEQDQLNDAVSSFLDALKIDPQLAPAYISLGKVQTKQGQLNNAVSNFLKALEIDPSMTY 310

Query: 292 -HPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            + E+A +Y  +   +E     L           ++   L  +  I L+M  +  A    
Sbjct: 311 IYFELAYLYHEMNMLNEAKENYLNTLK----YYPDNFFGLFNLGIINLDMKMLSDAKRYL 366

Query: 349 MLAMKIAP 356
           + A+KI P
Sbjct: 367 LQALKIDP 374



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 13/155 (8%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I  L    KN           L +  L    +     S    IE  K+   +  A    A
Sbjct: 23  IELLKNSLKNNP----QDIDTLSSLGLCYQIQKQYNESIQCLIECQKIAPQNYGAYFNLA 78

Query: 268 KSLISQNKKRKAEVILEKIWKVNP---HP--EIANIY-THLLSENTVGKLKRALRLEEIN 321
           +  ISQ K  +A+  L +  ++ P   HP  +++ IY    + E     ++  L+    N
Sbjct: 79  QVYISQGKLEEAKKQLLRSLEIEPKYSHPYFQLSQIYYQQGMLEEAKQNIQNYLK---FN 135

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +  ES + ++ I  +M +++QA      A+KI P
Sbjct: 136 PQHAESYLFLADINEQMNNLNQAKKCYQEAIKINP 170


>gi|67078506|ref|NP_001019924.1| interferon-induced protein with tetratricopeptide repeats 2 [Rattus
           norvegicus]
 gi|66910585|gb|AAH97384.1| Interferon-induced protein with tetratricopeptide repeats 2 [Rattus
           norvegicus]
          Length = 464

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 12/120 (10%)

Query: 177 ATKALDISPDAPWVTE--AVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRAILLIA 231
             KAL+  P  P  T   A+    +   +W   +  I  L Q    + +    + +L + 
Sbjct: 161 FEKALEKDPKNPESTSGWAIANYRLD--DWPASNDYIDSLEQAISLSPDNTYVKVLLAM- 217

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 ++     +     E+LK   ++I   + AAK  +  +   +A  +L+K  +  P
Sbjct: 218 ----KLEEVHENRAKELVEEALKKDPSAIDTMLGAAKFYVKVHDTDRAIQLLKKALESMP 273


>gi|330722420|gb|EGH00263.1| TPR repeat protein [gamma proteobacterium IMCC2047]
          Length = 850

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 88/256 (34%), Gaps = 19/256 (7%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            +  L   L+  +AL       A+   E  L + ++   ++ SL   +        A++Y
Sbjct: 464 PDSPLPLSLKGSVALLMGDNVSANAAFESALVLNSSYVPSLRSLALLATFDEKYELAKQY 523

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +AL  SP+   +            E+ +A   L + ++           L    +   
Sbjct: 524 YEEALIASPNNVNIYHDYAGLLFKLGEFEQAEPILQKARELGNNVQGTAVTL----ARMY 579

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI- 295
             + +   +  + + +L    + I A +    + +   +   A    +K  +     ++ 
Sbjct: 580 LQQNNPSQALAE-LRALNASPS-IEALLEIGNAQMLLKEYSSALASYQKALEKGARDDLG 637

Query: 296 ----ANIYTHLLSENTVGKLKRALRLEEINKESVE---SLVIVSKIALEMGSIDQAHAKA 348
               A     L  +++  +      L    +++     SL+  S++AL    +D+A    
Sbjct: 638 YYLIATAQIALGDQDSAER-----SLAVSMEDNEVFLPSLIAASELALANRQLDKARGLI 692

Query: 349 MLAMKIAPRKEIFLLL 364
                +AP  +   LL
Sbjct: 693 NKLEAVAPEHQALKLL 708



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 89/282 (31%), Gaps = 22/282 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PAT 152
             +  A K+ +   +  + +    V+LL   I  A+     A E  +   ++        
Sbjct: 164 GELARALKLANASLEVDSSN--PKVWLLLADIRRAQGLSKKAIEAYQRTTEVAHSNQDYL 221

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-----LAKEWSRA 207
            + A+  +  E+ +  + + A     K             A +           +++  +
Sbjct: 222 YQVAMRQILNENLKANETSKADETLAKLKASFYKQKMPKNAQLTHLRSVLAFQKQDYEAS 281

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
               N         +RN A  L+      A +G    +       LKL    I A    A
Sbjct: 282 AELANNVLA----IDRNHAGALLLVGTIAAIEGKYEQAEVSLERFLKLVPQHIQARKVLA 337

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322
            + ++ N++ +A   L  I +    P+     +         E     L     LE  + 
Sbjct: 338 YAQLNNNRQEQALETLHPIAEQEGAPDTQLLALIARAALRSGEAEQSSLYLRQALES-DP 396

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            + E  + +++  +     DQA A+       A  +    LL
Sbjct: 397 ANDEVRLALARSYILQRHFDQAIAELKSIKGSADSELSAQLL 438



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 46/169 (27%), Gaps = 13/169 (7%)

Query: 95  IAAHNIPLARKMHSYVSQQH------TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
           IAA  + LA +                  ++ L  LL+ + A+  +    A +  + +  
Sbjct: 673 IAASELALANRQLDKARGLINKLEAVAPEHQAL-KLLKAEQAMHLKDTQTAIKLYQQLYD 731

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                   +  L       G  + A      A    P+   V       Y       +AI
Sbjct: 732 KNPNLSV-LQKLVQAHWLAGQQDKALALLEVASQRYPNLAHVAYLQGTAYQAQGNTPKAI 790

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               +  +  +       +L +              +   A ++ KL  
Sbjct: 791 GAYRRAIQLNEGH-----VLALNNLAWLLKDSTPREALDLAKKAAKLAP 834


>gi|95929509|ref|ZP_01312252.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134625|gb|EAT16281.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 259

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 6/157 (3%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A +  E +         A+  L        D  +A+ +  +AL++ P       ++  
Sbjct: 89  AEARQTYERLADSADHAAEALVRLGLLCFSEQDYAAAKSHFDQALEVDPSCVAALNSLGD 148

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 + + A  +  +        +          +    + G +  +   A +++ L 
Sbjct: 149 LCQEHNDSAAAKKWYLKALS----VDDEDVEAAGNLAELFYETGQLEEAERYARQAVSLD 204

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEK--IWKVNP 291
                A +      + Q++++ A    E    W+ +P
Sbjct: 205 PGYAPAWLTLGYLYLDQDREKDAARCFETFLRWEKSP 241



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 3/162 (1%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           +I ++ +  ++G    +      + +   ++    +  A++     + RKA  +LE+   
Sbjct: 7   IIEQATDKLEQGQGRQAVDLLTRAHRQFSDNEEVIVLLAEAYAENRQPRKALQLLERFGS 66

Query: 289 VNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                    +A    +   +      +   RL +    + E+LV +  +         A 
Sbjct: 67  EAAAGAELVLALGDEYYAQDQVAEARQTYERLADSADHAAEALVRLGLLCFSEQDYAAAK 126

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           +    A+++ P     L          +++     W   AL 
Sbjct: 127 SHFDQALEVDPSCVAALNSLGDLCQEHNDSAAAKKWYLKALS 168


>gi|323975061|gb|EGB70170.1| cellulose synthase operon protein C [Escherichia coli TW10509]
          Length = 1157

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 14/255 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++    I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ PE    Y 
Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536

Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351
             LS +   +  L     L   + N    E  + +    V + A  +    +      + 
Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAML 596

Query: 352 MKIAPRKEIFLLLAQ 366
            +  P   I L LA 
Sbjct: 597 RQQPPSSRIDLTLAD 611



 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     +    +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|158522424|ref|YP_001530294.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511250|gb|ABW68217.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 593

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 60/213 (28%), Gaps = 7/213 (3%)

Query: 28  VSITWGNRLY----RTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83
           V + WG        R      ++ L   +   + L           A L+  L K  +  
Sbjct: 379 VILVWGGHDIFKHNRHLLSFFVATLLVLVLGSMTLSWRQTAIWKNTATLYESLLKSGHRP 438

Query: 84  GYKALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
                   G + +       A   +      H+  +  L + L +  A  +   + A   
Sbjct: 439 AEDVYTDLGNIMLGRGATDQAIVYYQKALA-HSPADPRLYHCLGLAHAR-KGAVSAALAA 496

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
               L +      A  +L       G ++ A  +   AL   P  P     +      + 
Sbjct: 497 YHRALALNPDFALAHNNLANLLADTGQIDEAIDHYRAALAADPGQPEFYNNLATTLAQSG 556

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
               AI  L +      E+   R  L   R +E
Sbjct: 557 RIPEAIQHLEKALAIDPEYQTARKNLARLRVME 589


>gi|170726211|ref|YP_001760237.1| serine/threonine protein kinase [Shewanella woodyi ATCC 51908]
 gi|169811558|gb|ACA86142.1| serine/threonine protein kinase [Shewanella woodyi ATCC 51908]
          Length = 922

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 97/315 (30%), Gaps = 49/315 (15%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL--AERQYNIAHEKL 143
           +A+    ++I  +    A K  +   Q+          L+E+Q  L  A  Q   A    
Sbjct: 620 QAIDQFAIAITTNEFEQAEKQLTIAKQRGADE----TVLIELQAYLFLASNQLKQAINTY 675

Query: 144 -EMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            + +   P+T+      LY  +       D    ++     L I+P   +  + +    +
Sbjct: 676 QKALSLRPSTKL-----LYNLALSYWWQSDSIHTKKTLKTLLSINPKHYFANQLLADISL 730

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
           +  +  +AI       K       N++I +    L  A  G    +   A  ++    N 
Sbjct: 731 IEGDLEQAIALYVPLVKTN-----NQSIDISNLGLSYALSGKYQQALKMAQLAVDSSPNH 785

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
               +  A   +   K  +                            +    ++ L L +
Sbjct: 786 PNWVLNLADIQLILGKTSQ----------------------------STTNYRQVLALTQ 817

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
              +   SL++ ++    +   + A     +A K+ P      L+A I           L
Sbjct: 818 GQSD-RVSLLLSAQAYAHLKEYNSAIKVINMAKKLNPDDGEVSLVAAIVYTRIGEHISAL 876

Query: 380 YWTQSALHAMPDPLW 394
              + AL++     W
Sbjct: 877 SQVEEALNSNIGAAW 891



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 19/187 (10%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAV-YSLYFESCRIGDLNSAQRY 176
              L   I+L E     A      +++            + Y+L       G    A + 
Sbjct: 721 ANQLLADISLIEGDLEQAIALYVPLVKTNNQSIDISNLGLSYAL------SGKYQQALKM 774

Query: 177 ATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           A  A+D SP+ P WV   +    ++  + S++ T   Q     +  +   ++LL A++  
Sbjct: 775 AQLAVDSSPNHPNWVLN-LADIQLILGKTSQSTTNYRQVLALTQGQSDRVSLLLSAQAYA 833

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           +  + +   +      + KL  +    S+ AA       +   A   +E+    N    I
Sbjct: 834 HLKEYNS--AIKVINMAKKLNPDDGEVSLVAAIVYTRIGEHISALSQVEEALNSN----I 887

Query: 296 ANIYTHL 302
              + +L
Sbjct: 888 GAAWFNL 894


>gi|332212284|ref|XP_003255249.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 2 isoform 2 [Nomascus leucogenys]
          Length = 483

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 37/220 (16%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 165 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 224

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +     + +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 225 LLALKLHKMHEEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 284

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLE--EINKESVESLVIVSKIALEMG 339
            +  P     H +I   Y             RA  L+   + +  +     + ++     
Sbjct: 285 LEYIPNNAYLHCQIGCCY-------------RAKVLQVMNLRENGMHGKRKLLEL----- 326

Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
            I  A A    A +       +  +LA +       E+A 
Sbjct: 327 -IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 365


>gi|260553979|ref|ZP_05826244.1| tetratricopeptide repeat family protein [Acinetobacter sp. RUH2624]
 gi|260404865|gb|EEW98370.1| tetratricopeptide repeat family protein [Acinetobacter sp. RUH2624]
          Length = 569

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 68/167 (40%), Gaps = 2/167 (1%)

Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R+ +  +  R+L+   +  D+ A+ + AI  +      + A    +   +  ++ + A  
Sbjct: 75  RSNSTTIKQRALDVALEYNDLQAALNIAIHWVVQEPKDVPALFYLSHIALKTHEYQLAAE 134

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340
            L+KI K++P  ++  I   +  EN   +      L     KE+   L +++ +  + G 
Sbjct: 135 TLDKILKIDPTADLEQILASIAPENAQDREVLLTALRSSAEKENPSILALIANLEAQNGQ 194

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           ++ A      A++  P+   F+L+         + +  L W   +  
Sbjct: 195 LEPALNTINRALRRRPKVTSFILMKANLLIALSDQEGALKWYAKSSR 241



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 389 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 446

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 447 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 488


>gi|192360667|ref|YP_001983749.1| putative serine/threonine protein kinase [Cellvibrio japonicus
           Ueda107]
 gi|190686832|gb|ACE84510.1| putative serine/threonine protein kinase [Cellvibrio japonicus
           Ueda107]
          Length = 892

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 6/163 (3%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   L+  +  A+  Y  A E   +++++  T      +L       G L+SA+   
Sbjct: 620 DDALQLFLKANLYQAKNDYQKAIETYRILVKLKPT-AINYQNLAIAYWYSGKLDSAKTNL 678

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           TKAL +SP +    +      +   +   AI    +         R     +    + + 
Sbjct: 679 TKALSLSPLSYKANQIRGAIALSEGDTQSAIVSFGK-----ITDKRKNPTDISNLGIAHL 733

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             G++ A+     ++ +L  N+I+  +  A +   + +K++A 
Sbjct: 734 LAGNLDAAALYLAQAHQLAPNNIVILLNWADAENLRGEKQQAT 776


>gi|39996268|ref|NP_952219.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39983148|gb|AAR34542.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|298505281|gb|ADI84004.1| TPR domain protein [Geobacter sulfurreducens KN400]
          Length = 266

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 67/233 (28%), Gaps = 40/233 (17%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           + L  G+      +   A  M      +    +    + L  +  + E +   A ++ E 
Sbjct: 7   ELLAKGISLAEGGDFTAAEAMFRTCV-ERAPDDPEGYFYL-GEALVEEGKLAEARQQYEK 64

Query: 146 MLQIPATREFAVYSL----------------YFESCRI------------------GDLN 171
            L +         +L                Y  +  +                   + +
Sbjct: 65  GLALAPGDVDGQIALGDICLELAEHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETS 124

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A     KAL+I P   +    +   +    E  +AI    +      E +   A     
Sbjct: 125 KAIEAFEKALEIDPANVFAYNGLGDAWYGLGEREKAIDAFRK----GIELDPTDAAAHFN 180

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                 D G+   +  + +E+++L  +  M+ +      +   + + A   LE
Sbjct: 181 LGELYYDLGETEEAEKECLEAVRLDPDFTMSYLTLGSLYMDDERVKDAIRYLE 233



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 15/204 (7%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD  +A+      ++ +PD P     + +  V   + + A     +        + +  I
Sbjct: 19  GDFTAAEAMFRTCVERAPDDPEGYFYLGEALVEEGKLAEARQQYEKGL-ALAPGDVDGQI 77

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L    LE A+    +A+Y  A+E   L   +    +       S  +  KA    EK  
Sbjct: 78  ALGDICLELAEHEAALAAYRRAVE---LDPRNADGYVNIGLVYNSLEETSKAIEAFEKAL 134

Query: 288 KVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +++P    A        Y     E  +       +  E++     +   + ++  ++G  
Sbjct: 135 EIDPANVFAYNGLGDAWYGLGEREKAID---AFRKGIELDPTDAAAHFNLGELYYDLGET 191

Query: 342 DQAHAKAMLAMKIAP--RKEIFLL 363
           ++A  + + A+++ P        L
Sbjct: 192 EEAEKECLEAVRLDPDFTMSYLTL 215


>gi|307301551|ref|ZP_07581311.1| FecR protein [Sinorhizobium meliloti BL225C]
 gi|306903608|gb|EFN34196.1| FecR protein [Sinorhizobium meliloti BL225C]
          Length = 1202

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 7/162 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             DL  A     +AL  +P +  +  ++        +   A        K A   +    
Sbjct: 421 DNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAA----EAAFKQAIALDPLDP 476

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     +++  D+  M  +  +   +L +  +  +A +   +  +   +  KA   L   
Sbjct: 477 VSHANLAIQYMDEMRMAEAKREIDTALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAG 536

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESV 325
              NP    A +           ++  A  L   + ++    
Sbjct: 537 STANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPNDP 578


>gi|293334567|ref|NP_001167956.1| hypothetical protein LOC100381672 [Zea mays]
 gi|223945123|gb|ACN26645.1| unknown [Zea mays]
          Length = 1009

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 74/243 (30%), Gaps = 20/243 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181
            LL               +  E +   P       Y     +    GD++ A RY   A+
Sbjct: 123 LLLGAIYYQIRNYDMCIAKNEEALAIDPH--FAECYGNMANAWKEKGDIDLAIRYYLTAI 180

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P+       +   Y      + A     Q                         +G 
Sbjct: 181 QLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINP----RLVDAHSNLGNLMKAQGF 236

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +Y   IE+L++  +  +A    A   +      KA +  ++  K+   P  A+ Y +
Sbjct: 237 IQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLK--PSFADAYLN 294

Query: 302 --------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                    + ++ +   +RA    +   +   +   ++ I  E G +D A      A+ 
Sbjct: 295 QGNVYKALGMPQDAIMCYQRA---LQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 351

Query: 354 IAP 356
             P
Sbjct: 352 YDP 354



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 18/188 (9%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP--A 151
             +  A +          +    +  L  L++ Q          A+    E +   P  A
Sbjct: 201 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYSCYIEALRIDPHFA 255

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                +  L+ E+   GDL+ A  Y  +A+ + P            Y        AI   
Sbjct: 256 IAWSNLAGLFMEA---GDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCY 312

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +   ++    A+     +    ++G +  +     +++      I A      +L 
Sbjct: 313 QRALQARPDY----AMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALK 368

Query: 272 SQNKKRKA 279
              +  +A
Sbjct: 369 DAGRVEEA 376


>gi|218782228|ref|YP_002433546.1| hypothetical protein Dalk_4399 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763612|gb|ACL06078.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 268

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 4/138 (2%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G    A  +  +A+D++P        +   Y+   EW +AI        N       
Sbjct: 91  LTLGRPQEAVEHFQRAVDLNPGYLNAQNNLGCAYLELAEWDKAIEVFKDLLANLTYPTPW 150

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +    +  +    +KGDM A+    + S+    N  +      +  +     +KA + LE
Sbjct: 151 KPAANLGWA--YFNKGDMDAALEYYLMSVDQSPNYAIGWRGLGQVYMETGNPQKAVISLE 208

Query: 285 KIWKVNPHPEIANIYTHL 302
           K       P+ A  Y  L
Sbjct: 209 KALVAA--PQFAEAYYDL 224


>gi|157145618|ref|YP_001452937.1| tetratricopeptide repeat protein [Citrobacter koseri ATCC BAA-895]
 gi|157082823|gb|ABV12501.1| hypothetical protein CKO_01364 [Citrobacter koseri ATCC BAA-895]
          Length = 389

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 92/282 (32%), Gaps = 57/282 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL VQ      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       R+G                       + ++Q Y    +W +AI    +
Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSDWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L+     DM  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRIEIAHFYCELALQQMGCDDMDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKE 323
           + +  KA   L+++  ++   E+ +    +          ++     L+RA    E N  
Sbjct: 227 KGEYAKAVESLQRV--ISQDKELVSETLEMLQTCYQQLGKNDEWAEFLRRA---VEENTG 281

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           +  + ++++ I       D A       ++  P   +F  L+
Sbjct: 282 AA-AELMLADILEAREGHDTAQVYITRQLQRHPTMRVFHKLM 322


>gi|224369058|ref|YP_002603222.1| tetratricopeptide repeat protein (TPR family protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223691775|gb|ACN15058.1| tetratricopeptide repeat protein (TPR family protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 787

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 78/230 (33%), Gaps = 43/230 (18%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYN 137
             KGY     G ++++  +I  A++  +   +   + T   E L  L     A  E    
Sbjct: 568 RAKGYIYFLLGKIAVSDKSIDQAKQYFNKSIKTYGKTTPSYEALAKL-----AEIENNNF 622

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           +A +  E++L   +    A  +L        D N A+ Y T AL++  D P     +   
Sbjct: 623 MAIKYYELILSYDSRYFPAYMNLSRLYQSKNDTNKAKEYLTTALEMKDDLPTAANDLAYI 682

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM------------IAS 245
                                   N  +  L +A+  E+    D               +
Sbjct: 683 LAEEG-------------------NELQKALHLAQIAESQTPNDPNILDTLGWVYYKQRA 723

Query: 246 YHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           Y  AI    ES+KL  +S  + +    +     +  KA   ++   K+NP
Sbjct: 724 YDLAIFKLTESIKLNPDSAFSHLHIGWAYYDTGRYEKAREHMKIALKLNP 773



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 8/142 (5%)

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKA 279
           ++       +  S     K D   +      +L++ D+   A+   A  L  +    +KA
Sbjct: 634 YDSRYFPAYMNLSRLYQSKNDTNKAKEYLTTALEMKDDLPTAANDLAYILAEEGNELQKA 693

Query: 280 EVILEKIWKVNPH-PEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
             + +      P+ P I +     Y    + + +   K    + ++N +S  S + +   
Sbjct: 694 LHLAQIAESQTPNDPNILDTLGWVYYKQRAYD-LAIFKLTESI-KLNPDSAFSHLHIGWA 751

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
             + G  ++A     +A+K+ P
Sbjct: 752 YYDTGRYEKAREHMKIALKLNP 773


>gi|24985101|gb|AAN69052.1|AE016538_1 hypothetical protein PP_3450 [Pseudomonas putida KT2440]
          Length = 801

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 15/143 (10%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQR 175
           +    L       A      A      +         R  A       +   GD ++A+R
Sbjct: 291 DPGNRLPLAYALEAAGDSETAQPIWRSLPDSAFTDNARLTAARG----ALNAGDADAARR 346

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           Y   A   S    W   A + +     +   A+ F  Q   ++   +   A    A+   
Sbjct: 347 YWDAAAHQS-ADDWALGAAIAER--QGDPQAALGFQRQALAHSPRPDHYYAASSTAQL-- 401

Query: 236 NADKGDMIASYHDAIESLKLCDN 258
               GD   S     E+++L  +
Sbjct: 402 ---AGDSAQSTAWLAEAVRLAPD 421



 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 13/134 (9%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATRE 154
           AA +   A+ +   +       N  L      + AL     + A    +    Q      
Sbjct: 304 AAGDSETAQPIWRSLPDSAFTDNARLT---AARGALNAGDADAARRYWDAAAHQSADDWA 360

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLN 212
                    + R GD  +A  +  +AL  SP     +   +  Q    A + +++  +L 
Sbjct: 361 LG----AAIAERQGDPQAALGFQRQALAHSPRPDHYYAASSTAQL---AGDSAQSTAWLA 413

Query: 213 QKKKNAKEWNRNRA 226
           +  + A +  R RA
Sbjct: 414 EAVRLAPDQPRYRA 427


>gi|88809832|ref|ZP_01125338.1| TPR domain protein [Synechococcus sp. WH 7805]
 gi|88786216|gb|EAR17377.1| TPR domain protein [Synechococcus sp. WH 7805]
          Length = 890

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 79/236 (33%), Gaps = 22/236 (9%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           ++ + +        P T   +  +L     +      A++   + L ++P+       + 
Sbjct: 218 WDRSVQAYLGKWSEPQTLFRSARAL----EKAQAWPEAEQLYRQLLQLTPNHGPAQLQLA 273

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENADKGDMIASYHDAIESL 253
                      AI  L+   +       N  RA     R      +GD+  +  D  E+L
Sbjct: 274 NVLHRQNRPLEAIRSLDALLQTTDSSCSNGLRARAQTNRGALRQLQGDLDGAVADHSEAL 333

Query: 254 KLCDNSIMA--SICA-AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVG 309
           +L  +  +A  ++ A A  L S    R+A   L  I +  P  P++      L   +T+ 
Sbjct: 334 RLEPSLTIAGDNLLALALQLRSLGFTRQALEALRVILRATPQRPDLL-----LQLGSTLM 388

Query: 310 KLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +L R         RL     E  E    + +    +G  +        A  +AP  
Sbjct: 389 ELGRVEAAVPCFRRLLRQRPELPEGHYQLGQALAALGHTEAGLHALNTAHTLAPEA 444


>gi|300865160|ref|ZP_07109984.1| hypothetical protein OSCI_1490020 [Oscillatoria sp. PCC 6506]
 gi|300336850|emb|CBN55134.1| hypothetical protein OSCI_1490020 [Oscillatoria sp. PCC 6506]
          Length = 939

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 13/201 (6%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E+ ++ D  +A     + L+++ +  W    + +       W+ AI           +
Sbjct: 16  LQEAEKLEDKIAAY---RRGLELNSNDSWTHHHLGENLAKLGRWNEAIVAFCDAITLKPD 72

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           ++ +   L  A + +   + D IA++  A+E   L        +    SL    +  +A 
Sbjct: 73  FSWSYHHLGDALAQQQQWE-DSIAAFRKALE---LNPEHYGTYVGLGNSLAKLGQWDEAI 128

Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
               +  ++NP     H  +AN             +  + ++ E N +  ES   + +I 
Sbjct: 129 AAYSRASELNPDADWIHFALANAVQQRNQFYLAKDIPSSSQIIECNPD-EESFQRLGEIY 187

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
            ++G  D A A    A+++ P
Sbjct: 188 FQLGQWDDAIATYRRAVELNP 208


>gi|161378127|ref|NP_745588.2| hypothetical protein PP_3450 [Pseudomonas putida KT2440]
          Length = 879

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 15/143 (10%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQR 175
           +    L       A      A      +         R  A       +   GD ++A+R
Sbjct: 369 DPGNRLPLAYALEAAGDSETAQPIWRSLPDSAFTDNARLTAARG----ALNAGDADAARR 424

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           Y   A   S    W   A + +     +   A+ F  Q   ++   +   A    A+   
Sbjct: 425 YWDAAAHQS-ADDWALGAAIAER--QGDPQAALGFQRQALAHSPRPDHYYAASSTAQL-- 479

Query: 236 NADKGDMIASYHDAIESLKLCDN 258
               GD   S     E+++L  +
Sbjct: 480 ---AGDSAQSTAWLAEAVRLAPD 499



 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 13/134 (9%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATRE 154
           AA +   A+ +   +       N  L      + AL     + A    +    Q      
Sbjct: 382 AAGDSETAQPIWRSLPDSAFTDNARLT---AARGALNAGDADAARRYWDAAAHQSADDWA 438

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLN 212
                    + R GD  +A  +  +AL  SP     +   +  Q    A + +++  +L 
Sbjct: 439 LG----AAIAERQGDPQAALGFQRQALAHSPRPDHYYAASSTAQL---AGDSAQSTAWLA 491

Query: 213 QKKKNAKEWNRNRA 226
           +  + A +  R RA
Sbjct: 492 EAVRLAPDQPRYRA 505


>gi|88704012|ref|ZP_01101727.1| TPR domain protein [Congregibacter litoralis KT71]
 gi|88701839|gb|EAQ98943.1| TPR domain protein [Congregibacter litoralis KT71]
          Length = 925

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 71/219 (32%), Gaps = 9/219 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G  N+A      A   +P++      + +  +  +  + AI    +  +       
Sbjct: 41  ALAEGRDNAALIDVRAAQQQAPNSREARRLLSEIEMWRQNPTAAIEEAERALQGGAPTPA 100

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               L  +                    S+K     +      A++  S     KA   +
Sbjct: 101 ILITLAKSLIKGRRYSDFDALVADGTFTSIKDDPRYLS---LLARAQASWGDSAKARATI 157

Query: 284 EKIWKVNPH-PEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +  +  P  P++A+ Y  L  EN +     + R       +  + E    +  + + + 
Sbjct: 158 NQALEKAPSDPDVASAYALLTIENNMTLKEAMGRLEESVTKHPLAYEVWSALGILQITLK 217

Query: 340 SIDQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTD 376
           + D      M ++KI P +    +LL   + ++  ++  
Sbjct: 218 NYDAGADAFMESLKINPYRLTDRYLLADALIRSQRYDEA 256



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 71/207 (34%), Gaps = 9/207 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  +A+ +   A++I P       A+ +  +    +  A+       +     + N    
Sbjct: 489 DEPNAEAHYEHAIEIEPGNKPANSALAEMRLKDGNYREALAL----YRTILASHENDLDT 544

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL---EK 285
           LI  +   +  GD  +     +++ +    S    +  A+  ++  +      ++   E 
Sbjct: 545 LIRIAAVQSAMGDPKSMESTLLQAYEAHPASARPPLSLARYYVANKRYNDTVRLISSFEG 604

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
               +P        +H+    T   +  A R++++   +    ++ ++  +    +  A 
Sbjct: 605 NGAADPRLYALLAQSHMAMGETSSAVAAAKRMQKVEPTNALGFILEARALVGGEKLAAAT 664

Query: 346 AKAMLAMKIA--PRKEIFLLLAQIEQA 370
                A+KI   P     L+ A +   
Sbjct: 665 DALREALKINNSPAIRSELITALLLDG 691



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 90/309 (29%), Gaps = 53/309 (17%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L     +A+ +   + +  E +L I       +        + G  + A      A 
Sbjct: 375 AKQLLATALIAQGRNAESTKLYEELLSINPKSTANIVQYSSVLNKSGKRDQAIEQLKTAR 434

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P +  V   +V   +     + A   +     +  +  +  A +L  R     D+ +
Sbjct: 435 KLAPGSAEVRARLVSFLLSDGREAEAEQEVASYLDDYSD--KAVAHVLAGRFAYVIDEPN 492

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI------------------- 282
             A Y  AIE   +   +  A+   A+  +     R+A  +                   
Sbjct: 493 AEAHYEHAIE---IEPGNKPANSALAEMRLKDGNYREALALYRTILASHENDLDTLIRIA 549

Query: 283 ---------------LEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322
                          L + ++ +P        +A  Y      N   +L      E    
Sbjct: 550 AVQSAMGDPKSMESTLLQAYEAHPASARPPLSLARYYVANKRYNDTVRL--ISSFEGNGA 607

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
                  ++++  + MG    A A A    K+ P   +  +L    +A            
Sbjct: 608 ADPRLYALLAQSHMAMGETSSAVAAAKRMQKVEPTNALGFILEA--RALVGGEK-----L 660

Query: 383 QSALHAMPD 391
            +A  A+ +
Sbjct: 661 AAATDALRE 669


>gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 1107

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 10/183 (5%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A     KAL+I P        +   Y   K++  AI       +           L + 
Sbjct: 450 AAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQINP--KNLDLYLNMG 507

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +L   +      + +     L +  ++  A         +  + ++A    E+  K+  
Sbjct: 508 FALVKLN--HHQEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAIENYEQAIKIK- 564

Query: 292 HPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            P+ A IY  L      +     +    +  E+N   +E+   +  +     ++ +A   
Sbjct: 565 -PDWAEIYCRLAHIQKQDQPQVAIANLEKSIELNPNYIEAHQQLCDLLSHSTNLTKARKA 623

Query: 348 AML 350
           A  
Sbjct: 624 ADQ 626



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 4/125 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    G   SA     +AL I+P    + + + + +VL  +    I  +         +
Sbjct: 14  IEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQTAVNLKPNF 73

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A+  ++       +  +  +     E+L +      A            +  +A  
Sbjct: 74  ----AVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRFSEAIQ 129

Query: 282 ILEKI 286
             +K 
Sbjct: 130 CYQKA 134


>gi|121998312|ref|YP_001003099.1| hypothetical protein Hhal_1530 [Halorhodospira halophila SL1]
 gi|121589717|gb|ABM62297.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila
           SL1]
          Length = 873

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/356 (12%), Positives = 97/356 (27%), Gaps = 69/356 (19%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----------------ALAERQYNIAHE 141
                    +  V+  H   +E    LL   +                AL       A  
Sbjct: 108 GEAKARVFAYRAVAAYHRGDDEAGSELLTAAVSEAADLPELELAKAFGALVAGDRAQAAS 167

Query: 142 KLEMMLQIPA------------TREFAVYSLYFES----------------------CRI 167
            LE  + +                         E+                       R 
Sbjct: 168 HLEAAVALDEDYYPAWTLRGSLAEVVGERQSAREAFDRAVDLRPDYVSDRFSRAMVRLRE 227

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW-SRAITFLNQKKKNAKEWNRNRA 226
            D   A+  A + ++ +P        ++    L  +    A T   +     +E+   R 
Sbjct: 228 EDFEGARADAEQLVEGAPGFA-GGYFLMGLVELEGDSPDEARTQFEEALARQREYRPARP 286

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L    +    ++G++  + H           S+ +    A+  ++Q++  +A  +L + 
Sbjct: 287 YL----AGLELERGNLAQAEHHLNRYHASGPGSVTSYTLRARLYMAQDQPEEAREVLSEA 342

Query: 287 ------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                 W       +  +Y    + +    ++   R+ +   +++E+  ++    L  G 
Sbjct: 343 LAERPEWVSELGDRLGALYLD--TGDVESGIQTLRRVLDAQPDALETREVLGTALLLAGD 400

Query: 341 IDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            ++   +                 L+ A IE             TQ    A  DP+
Sbjct: 401 EEKGLEELEAVASADGALRAADLTLVQAYIEAGRFEAAAVAAERTQD--KAPEDPV 454



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 82/256 (32%), Gaps = 19/256 (7%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDI--SPDAPW 189
             +Y  A       LQ   T E         +    GD ++A  + T+AL+    P    
Sbjct: 25  AGEYRAAVLDYRNALQKVETPET--RGQLGLAYAGDGDTDAAINHLTRALEQGAEPKRYA 82

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
            T A +            +     +    +     +A +   R++    +GD  A     
Sbjct: 83  PTLARLYHETRQH---GELVDFEYEALEGEA----KARVFAYRAVAAYHRGDDEAGSELL 135

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN----PHPEIANIYTHLLSE 305
             ++    +     +  A   +    + +A   LE    ++    P   +      ++ E
Sbjct: 136 TAAVSEAADLPELELAKAFGALVAGDRAQAASHLEAAVALDEDYYPAWTLRGSLAEVVGE 195

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL 364
               + +   R  ++  + V      + + L     + A A A   ++ AP     + L+
Sbjct: 196 RQSAR-EAFDRAVDLRPDYVSDRFSRAMVRLREEDFEGARADAEQLVEGAPGFAGGYFLM 254

Query: 365 AQIE-QANSHNTDKIL 379
             +E + +S +  +  
Sbjct: 255 GLVELEGDSPDEARTQ 270



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 91/297 (30%), Gaps = 16/297 (5%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFA 156
             AR++ S    +       L   L   + L         + L  +L        TRE  
Sbjct: 333 EEAREVLSEALAERPEWVSELGDRLGA-LYLDTGDVESGIQTLRRVLDAQPDALETREVL 391

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L       GD                        +VQ Y+ A  +  A     + + 
Sbjct: 392 GTALLL----AGDEEKGLEELEAVASADGALRAADLTLVQAYIEAGRFEAAAVAAERTQD 447

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A E      +    R+     +GD   +     E L+   +S   ++  +    ++ + 
Sbjct: 448 KAPE----DPVGYNLRAAVLLGQGDRPGARRVLREGLEAVPDSADLAMNLSSLERARGEA 503

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSK 333
                +L  + +  P  P +A       +  ++    L    +  E   E  + L   ++
Sbjct: 504 EAGIEVLRGVHQAVPDEPRVAMRLAEWLIQMDSAAEGLSVLEQTLEERPEDAQFLGEAAR 563

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           I    G   +A      A ++ P       L  + +A + +    +   +SAL A P
Sbjct: 564 IYGMAGEDREARRLLERATELDPDAADLHYLLALARAAAGDEQGSVEALESALSADP 620



 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 76/251 (30%), Gaps = 8/251 (3%)

Query: 131 LAERQY-NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
             E    + A  + E  L        A   L       G+L  A+ +  +     P +  
Sbjct: 258 ELEGDSPDEARTQFEEALARQREYRPARPYLAGLELERGNLAQAEHHLNRYHASGPGSVT 317

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                 + Y+   +   A   L++      EW       L A  L+  D    I +    
Sbjct: 318 SYTLRARLYMAQDQPEEAREVLSEALAERPEWVSELGDRLGALYLDTGDVESGIQTLRRV 377

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSEN 306
           +++     +++        +L+    + K    LE +   +      ++  +  ++ +  
Sbjct: 378 LDAQ---PDALETREVLGTALLLAGDEEKGLEELEAVASADGALRAADLTLVQAYIEAGR 434

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LA 365
                  A R ++   E      + + + L  G    A       ++  P      + L+
Sbjct: 435 FEAAAVAAERTQDKAPEDPVGYNLRAAVLLGQGDRPGARRVLREGLEAVPDSADLAMNLS 494

Query: 366 QIEQANSHNTD 376
            +E+A      
Sbjct: 495 SLERARGEAEA 505



 Score = 39.9 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 76/258 (29%), Gaps = 14/258 (5%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           + +  S         L  +   Q  +   ++  A    E                     
Sbjct: 408 LEAVASADGALRAADLTLV---QAYIEAGRFEAAAVAAERTQDKAPEDPVGYNLRAAVLL 464

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD   A+R   + L+  PD+  +   +        E    I  L    +   +  R  
Sbjct: 465 GQGDRPGARRVLREGLEAVPDSADLAMNLSSLERARGEAEAGIEVLRGVHQAVPDEPRV- 523

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+ L    ++     + ++     +E        +     AA+      + R+A  +LE+
Sbjct: 524 AMRLAEWLIQMDSAAEGLSVLEQTLEERPEDAQFL---GEAARIYGMAGEDREARRLLER 580

Query: 286 IWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             +++  P+ A+++         + +  G ++        +     +    S+     G 
Sbjct: 581 ATELD--PDAADLHYLLALARAAAGDEQGSVEALESALSADPSHYSAAHARSRQLARQGQ 638

Query: 341 IDQAHAKAMLAMKIAPRK 358
            ++A        +  P  
Sbjct: 639 REEAEEVFAPVAEANPDA 656



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 51/370 (13%), Positives = 107/370 (28%), Gaps = 44/370 (11%)

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            E +      R FA       +   GD  +     T A+  + D P +  A     ++A 
Sbjct: 103 YEALEGEAKARVFAYR--AVAAYHRGDDEAGSELLTAAVSEAADLPELELAKAFGALVAG 160

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261
           + ++A + L       +++          R       G+  ++      ++ L  + +  
Sbjct: 161 DRAQAASHLEAAVALDEDYYP----AWTLRGSLAEVVGERQSAREAFDRAVDLRPDYVSD 216

Query: 262 ---ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKR 313
               ++   +    +  +  AE ++E        P  A  Y       L  ++      +
Sbjct: 217 RFSRAMVRLREEDFEGARADAEQLVEGA------PGFAGGYFLMGLVELEGDSPDEARTQ 270

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372
                   +E   +   ++ + LE G++ QA           P     + L A++  A  
Sbjct: 271 FEEALARQREYRPARPYLAGLELERGNLAQAEHHLNRYHASGPGSVTSYTLRARLYMAQD 330

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK---------------TLCY 417
              +        AL A   P W+S+ G        L   +                    
Sbjct: 331 QPEE-AREVLSEAL-AER-PEWVSELG---DRLGALYLDTGDVESGIQTLRRVLDAQPDA 384

Query: 418 FEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPL 477
            E          + + +    LE           L       + +  +   FE + +   
Sbjct: 385 LE-TREVLGTALLLAGDEEKGLEELEAVASADGALRAADLTLVQAYIEAGRFEAAAVAAE 443

Query: 478 DPHIRQPDDP 487
               + P+DP
Sbjct: 444 RTQDKAPEDP 453


>gi|328951923|ref|YP_004369257.1| FecR protein [Desulfobacca acetoxidans DSM 11109]
 gi|328452247|gb|AEB08076.1| FecR protein [Desulfobacca acetoxidans DSM 11109]
          Length = 1207

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 86/267 (32%), Gaps = 48/267 (17%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G L+ AQ+ A   L   P+ P     +    +       A     +   ++ +W  
Sbjct: 271 AYDQGRLSEAQQLAEHVLQQVPEQPLALTLLGWINLQNHRPQEAAALFEK--VSSPDWR- 327

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                LI +SL    +GD + +Y    +  +    S   ++ +    +   K  +A+  L
Sbjct: 328 ----CLIGQSLARYRRGDPVGAYKLFDQGRRGLPPSPFLAVMSGYFTLMVGKASEAQREL 383

Query: 284 EKIWKVNPHPE---------------------IANIYTHLLS------------------ 304
             +  + P P                      +A     L                    
Sbjct: 384 AAVANLPPSPAVVLARSLLAQIHIVQNRKDAALAEACQALAQAPGSPLAHLTMGLVKISF 443

Query: 305 -ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            + T  +L    +   ++   V+  + ++++ L    + +A      A+++APR+   L 
Sbjct: 444 FDQTAARLH-FEKALALDPGLVDGYLYLARLWLGADHLARAWQTVSQALRLAPREGEVLS 502

Query: 364 LAQIEQANSHNTDKILYWTQSALHAMP 390
           LA   +    +      +   A+ A P
Sbjct: 503 LAGFIRLAYRDYAGACQFFHQAIAANP 529



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/340 (11%), Positives = 106/340 (31%), Gaps = 22/340 (6%)

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYD---KGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112
           ++  +++R+    P   + +  +         + A+ +G  ++       A++  + V+ 
Sbjct: 329 LIGQSLARYRRGDPVGAYKLFDQGRRGLPPSPFLAVMSGYFTLMVGKASEAQRELAAVAN 388

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAV-YSLYFESCRIGDL 170
                   L   L  QI + + + + A  E  + + Q P +    +   L        D 
Sbjct: 389 LPPSPAVVLARSLLAQIHIVQNRKDAALAEACQALAQAPGSPLAHLTMGLV--KISFFDQ 446

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A+ +  KAL + P        + + ++ A   +RA   ++Q  + A         +L 
Sbjct: 447 TAARLHFEKALALDPGLVDGYLYLARLWLGADHLARAWQTVSQALRLAP----REGEVLS 502

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                     D   +     +++          +          K  +A   +     ++
Sbjct: 503 LAGFIRLAYRDYAGACQFFHQAIAANPRFGEPHLGLGIYYFRHRKNPQALTEMLTATLLD 562

Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P       E+   +  + + +    L+       ++       +       ++    +A 
Sbjct: 563 PRVSSYQSELGKAFYQVRAFDKA--LEVYDYAAALDPRDPTPHLYKGIALSDLYRPGEAI 620

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            +   ++ +     IF     +++    +     Y    A
Sbjct: 621 QEINRSIALNDNAAIFRTRLALDR----DLAVRNYNLARA 656


>gi|313219488|emb|CBY30412.1| unnamed protein product [Oikopleura dioica]
          Length = 870

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 98/292 (33%), Gaps = 39/292 (13%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNI----AHEKLEMMLQIPATRE 154
              A K++         +   LV L    Q        +     A +  E  L+I  T E
Sbjct: 596 YEEAIKVYEQAIALEPLNPNPLVNLAWVKQTLGISSGSSRMVRDAEQLYEQSLRIKPTSE 655

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFL 211
             +  L     + G+ + A     +A  + P        V++     V A E  RA+  L
Sbjct: 656 AFMR-LGSLKYQRGETSEANLEYEEARKLDP---ENHMIVLEYSIVLVSAGETERALEIL 711

Query: 212 NQKKKNAKEWNRNRAILLIA-----RSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                  K+       + +A     R  +      ++ + H  IE  K  D        A
Sbjct: 712 QVAVSKDKDCKLANLHITLAKIYGPRKHQFMKAASVLENCHREIEENKHEDE------IA 765

Query: 267 AKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A+             R  + +       NP       +     + T+  L+ A++L    
Sbjct: 766 AEIKFQLGAMYHEIVRNNQNV------SNPTKN-EEAFLAKAKQKTLELLQEAIKL---K 815

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANS 372
              VE  V+++++ L  G++          +K+ P  E+  +L  ++++A S
Sbjct: 816 PGDVEYRVLLAQVHLRSGNLKDGTHVLKTILKLKPDHEVATILLNRVKEAES 867


>gi|302657677|ref|XP_003020555.1| hypothetical protein TRV_05342 [Trichophyton verrucosum HKI 0517]
 gi|291184400|gb|EFE39937.1| hypothetical protein TRV_05342 [Trichophyton verrucosum HKI 0517]
          Length = 824

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +  ++ A +      Q+     +   +     E     + + AQ     A+  +P    
Sbjct: 611 LQSDHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYS 668

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               + + Y    +    + F  Q  + A   N    +L+ +  L    + ++ A+    
Sbjct: 669 AWYGLGKVYERMGK----LRFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQY 724

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLS 304
             +  L  +S++A +  A++L+  N+   A     +L+ +    P  H  +  +Y  +  
Sbjct: 725 SRASSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQD 784

Query: 305 ENTVGKLKRALRLEEINKESV 325
           +     +K       ++ ++ 
Sbjct: 785 KGNA--IKHFTTALNLDPKAA 803


>gi|6807810|emb|CAB70695.1| hypothetical protein [Homo sapiens]
          Length = 540

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 178 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 235

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 236 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 295

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 296 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 355

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 356 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 413

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 414 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 471

Query: 391 D 391
           D
Sbjct: 472 D 472


>gi|163783489|ref|ZP_02178480.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881253|gb|EDP74766.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 850

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 80/261 (30%), Gaps = 66/261 (25%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +I+  N  LARK  +  S +  +        L       E +Y  A    + +L     +
Sbjct: 475 AISIGNGALARKFLTEESGEEIY--------LMGMSFFIEGKYREAIAYFKRLLDRGEFK 526

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+  +      +G+   A+    + L   PD+    +A +                  
Sbjct: 527 SKALLRIADSYYNLGNYERAKELYKEILTFYPDSTEAFDATL------------------ 568

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICA---AKS 269
                              +L   +           +    +    S M +      A  
Sbjct: 569 -------------------ALAQIELQKPTKDLEKLVRDFERKFPGSPMITDLKYQLANL 609

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            I + ++ +A  ILE                 LL++ T  + K  ++L EI ++      
Sbjct: 610 YIKEGRRSEARRILE----------------ELLTKETY-RAKALIKLAEIEEDPRRKEE 652

Query: 330 IVSKIALEMGSIDQAHAKAML 350
           ++ +  ++    D+  A A+L
Sbjct: 653 LLKEALMKGSGEDKERATALL 673


>gi|169172639|ref|XP_001713896.1| PREDICTED: pre-mRNA-processing factor 6-like [Homo sapiens]
          Length = 406

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 44  RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 101

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 102 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 161

Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L +                 K  M  +     + LK C +S    +  ++     
Sbjct: 162 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 221

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 222 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 279

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 280 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 337

Query: 391 D 391
           D
Sbjct: 338 D 338


>gi|72382930|ref|YP_292285.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002780|gb|AAZ58582.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 612

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 11/197 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G L  ++ Y  KA++++P+       +            A ++  +  +    +   
Sbjct: 137 KDLGKLKESETYTRKAIELNPNYAEAHSILGLILRDLGNLQEAESYTRKAIEIKPNY--- 193

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A       L   D G +  +     +++++  N   A       L    K ++AE+   
Sbjct: 194 -AEACSNLGLILKDSGQLQEAELSCRKAIEINPNFADAYSNLGGILSDLGKLKEAELSAR 252

Query: 285 KIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEE----INKESVESLVIVSKIALEMG 339
           K   +   P  A   ++L      +G L+ A         I     E+L  +  + +++ 
Sbjct: 253 KAIAIK--PNYAEACSNLGIILKDLGNLQEAESYTRKAIEIKPNFAEALYSLGSLLIDLD 310

Query: 340 SIDQAHAKAMLAMKIAP 356
             ++A    + A+++ P
Sbjct: 311 KREEAMKSLLKAVELKP 327



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 4/132 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G L  A+    KA++I+P+       +        +   A     +       +   
Sbjct: 205 KDSGQLQEAELSCRKAIEINPNFADAYSNLGGILSDLGKLKEAELSARKAIAIKPNY--- 261

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A       +   D G++  +     +++++  N   A       LI  +K+ +A   L 
Sbjct: 262 -AEACSNLGIILKDLGNLQEAESYTRKAIEIKPNFAEALYSLGSLLIDLDKREEAMKSLL 320

Query: 285 KIWKVNPHPEIA 296
           K  ++ P  + A
Sbjct: 321 KAVELKPALDKA 332


>gi|325916195|ref|ZP_08178479.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537615|gb|EGD09327.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 421

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 104/354 (29%), Gaps = 17/354 (4%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   YR +    + IL   L    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQSSYDLGNVVVSVGGNDYRAAMPQAVLILIIALLVVWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K    KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVTASEDDEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L     V++A A      A    + + +   T    +      + +      A   A  
Sbjct: 120 ALAS--AVRVADARGDEAAATALAQQLAERDPTAHALLQGERHLARQR--PVEAIN-ALD 174

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A +  P                     A   L   ++ A       + L    + +   +
Sbjct: 175 AANAQPLPARGLLLRTHALTQIGRADEAYGQLGALRQQAVLAPEAYSALEATLAEQTLLQ 234

Query: 240 GDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
                +  +  E+L     +  A + A A+     +    A   LE+         +  +
Sbjct: 235 AGDANALAERWEALPKPLRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQWDESLVRL 294

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           Y  L  E    +   A R      +S   L+ ++++A       QA      A+
Sbjct: 295 YGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRAL 348


>gi|307321312|ref|ZP_07600712.1| FecR protein [Sinorhizobium meliloti AK83]
 gi|306893040|gb|EFN23826.1| FecR protein [Sinorhizobium meliloti AK83]
          Length = 1197

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 49/162 (30%), Gaps = 7/162 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             DL  A     +AL  +P +  +  ++        +   A        K A   +    
Sbjct: 421 DNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAA----EAAFKQAIALDPLDP 476

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     +++  D+  M  +  +   +L +  +  +A +   +  +   +   A   L   
Sbjct: 477 VAHANLAIQYMDEMRMAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADNAVEDLLAG 536

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESV 325
              NP    A +           ++  A  L   + ++    
Sbjct: 537 STANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPNDP 578



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 70/193 (36%), Gaps = 8/193 (4%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRA 226
            D +  +    +AL I P+ P   EA       +  +   A+  L +  K A   +    
Sbjct: 387 DDRDELRDGVERALSIDPEDPTALEARAHYRYHIDNDLEGALADLERALKTAPGSSS--- 443

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +  +  L    +GD  A+     +++ L     +A    A   + + +  +A+  ++  
Sbjct: 444 -IWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVAHANLAIQYMDEMRMAEAKREIDAA 502

Query: 287 WKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             V+P  ++A +     H+ +      ++  L     N     + ++++    E G    
Sbjct: 503 LSVDPSFDVALVARGRYHMQNGEADNAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIP 562

Query: 344 AHAKAMLAMKIAP 356
           A      A ++ P
Sbjct: 563 AAQALDNADRLDP 575


>gi|302509350|ref|XP_003016635.1| hypothetical protein ARB_04926 [Arthroderma benhamiae CBS 112371]
 gi|291180205|gb|EFE35990.1| hypothetical protein ARB_04926 [Arthroderma benhamiae CBS 112371]
          Length = 805

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +  ++ A +      Q+     +   +     E     + + AQ     A+  +P    
Sbjct: 592 LQSDHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYS 649

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               + + Y    +    + F  Q  + A   N    +L+ +  L    + ++ A+    
Sbjct: 650 AWYGLGKVYERMGK----LRFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQY 705

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLS 304
             +  L  +S++A +  A++L+  N+   A     +L+ +    P  H  +  +Y  +  
Sbjct: 706 SRASSLSPHSVLARLRKARTLLKLNEVNLAHVELKVLKDVAPDEPNVHYLLGKLYKMIQD 765

Query: 305 ENTVGKLKRALRLEEINKESV 325
           +     +K       ++ ++ 
Sbjct: 766 KGNA--IKHFTTALNLDPKAA 784


>gi|116749962|ref|YP_846649.1| TPR repeat-containing serine/threonin protein kinase
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699026|gb|ABK18214.1| serine/threonine protein kinase with TPR repeats [Syntrophobacter
           fumaroxidans MPOB]
          Length = 747

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 6/140 (4%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E L  L+E Q   +      A + LE  L++   R   + ++        D ++A +Y  
Sbjct: 482 EPL--LVEAQN-QSASNPAEAQKLLEEALRLDPNRFETILTMARLQASRKDYSAAVQYYR 538

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A+ ++ +AP     +        +++ AI                   LL   +  +  
Sbjct: 539 DAVRVNGNAPEAYSEMGALQQAQGDYASAIRSYEAGLALRPSHPDE---LLANVAFCHDK 595

Query: 239 KGDMIASYHDAIESLKLCDN 258
             +   +     ++L++  N
Sbjct: 596 LNNPDQARRYYEQALEINPN 615



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 14/138 (10%)

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN--- 290
            +N    +   +     E+L+L  N     +  A+   S+     A        +VN   
Sbjct: 488 AQNQSASNPAEAQKLLEEALRLDPNRFETILTMARLQASRKDYSAAVQYYRDAVRVNGNA 547

Query: 291 PHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQA 344
           P       Y+ +        +    ++       +     + L+  V+    ++ + DQA
Sbjct: 548 P-----EAYSEMGALQQAQGDYASAIRSYEAGLALRPSHPDELLANVAFCHDKLNNPDQA 602

Query: 345 HAKAMLAMKIAPRKEIFL 362
                 A++I P     L
Sbjct: 603 RRYYEQALEINPNNRAAL 620


>gi|257487463|ref|ZP_05641504.1| hypothetical protein PsyrptA_29588 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331008946|gb|EGH89002.1| hypothetical protein PSYTB_04455 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL+ R       GD   +  D  ++  L   ++      A    +  +  +A   L
Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333
           +K        P  E+   Y    + +    + + KR  R   +      ++  S +    
Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            A  +    +            P +++F
Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390


>gi|227356456|ref|ZP_03840844.1| cellulose synthase protein [Proteus mirabilis ATCC 29906]
 gi|227163566|gb|EEI48487.1| cellulose synthase protein [Proteus mirabilis ATCC 29906]
          Length = 1090

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/380 (15%), Positives = 114/380 (30%), Gaps = 59/380 (15%)

Query: 55  WILLFAVSRFFLSCPAMLF-HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           W LL       L+    +      +      YK      +     +I LA+       + 
Sbjct: 277 WHLLAKADEALLNQEYSVAKRYFTQVRQLSPYK--SEAYI--GLGDIELAQHQLEQAERY 332

Query: 114 --HTFHNEY--------LVYLLEVQIALAERQYNI--AHEKLEMMLQIPATREFAVYSLY 161
                  +         L  L   Q      Q+      ++ + + Q         Y   
Sbjct: 333 YQQALQYQPNDAATLHSLTKLYRQQSHQKAAQFMANLTSQQYKNLAQD--------YGYI 384

Query: 162 FESCRIG---DLNSAQRY-----ATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               +     D    Q Y       KA+  + PD  W    +    ++ ++   A  + N
Sbjct: 385 ISGIQQDLAADDEQQQHYLSAIEKRKAIAKAYPDEVWNIYRLADDLLITQQPQLAEDYFN 444

Query: 213 Q-KKKNAKEWNRNRAILL----IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA- 266
           Q  ++   + +R  A  L      R+ +  +    I     +     L        I A 
Sbjct: 445 QLNQRRPNDPSRRYAYALYLNKTGRAQQALNTLKTIPLSQRSESMNALDSQLRFGQIMAH 504

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEE 319
           A+SL   N++++A   L   +   P PE       +   +     +     L     +  
Sbjct: 505 AQSLREHNQQQQAVEYL---FTHIP-PEQKIESYLLLAQWAE-EDDQLNQALNYYHTVLN 559

Query: 320 INKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQANSHNT 375
           +   + E+ ++ + +I+L    IDQA        +++P K        LA  E+   +  
Sbjct: 560 LAPNN-ETALLGATEISLAQHQIDQARYYLAQIEQLSPEKFNHYSLRRLANAEKTAGNID 618

Query: 376 DKILY--WTQSALHAMPDPL 393
               Y  +    +   PD  
Sbjct: 619 KAKHYFIYLARQVDKEPDSA 638



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 81/290 (27%), Gaps = 43/290 (14%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALA 132
                         L   L         LA K +     +    +    +LL +   AL 
Sbjct: 237 RYSRANQRAPAIYYLSQAL--------TLAPKHNDSDLWRTLLQSNQYWHLLAKADEALL 288

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            ++Y++A      + Q+   +  A   L         L  A+RY  +AL   P+      
Sbjct: 289 NQEYSVAKRYFTQVRQLSPYKSEAYIGLGDIELAQHQLEQAERYYQQALQYQPNDAATLH 348

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++ + Y        A    N   +  K   ++   ++     + A   +    Y  AIE 
Sbjct: 349 SLTKLYRQQSHQKAAQFMANLTSQQYKNLAQDYGYIISGIQQDLAADDEQQQHYLSAIEK 408

Query: 253 LKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            K            AK+   +  N  R A+ +L         P++A  Y           
Sbjct: 409 RKA----------IAKAYPDEVWNIYRLADDLLIT-----QQPQLAEDY----------- 442

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                +L +            +   L +    +A         I   +  
Sbjct: 443 ---FNQLNQRRPNDPSRRYAYA---LYLNKTGRAQQALNTLKTIPLSQRS 486


>gi|148222496|ref|NP_001087374.1| PRP6 pre-mRNA processing factor 6 homolog [Xenopus laevis]
 gi|50927247|gb|AAH79686.1| MGC80263 protein [Xenopus laevis]
          Length = 948

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 99/301 (32%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 586 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 643

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 644 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAQD 703

Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L + +                     +     + LK C +S    +  ++     
Sbjct: 704 LCEEALRHYEDFPKLWMMKGQIEEQMEQTEKARDAYNQGLKKCIHSTSLWLLLSRLEEKV 763

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP  PE+      L  E   G    A  L     +E   S ++ 
Sbjct: 764 GQLTRARAILEKSRLKNPKTPELWLESVRL--EFRAGLKNIANTLMAKALQECPNSGILW 821

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 822 AE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 879

Query: 391 D 391
           D
Sbjct: 880 D 880



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 295 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 351

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 352 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DLRAKKRVLRKA 403

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    +VE  + ++++     + + A
Sbjct: 404 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTNVELWLALARL----ETYENA 456

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 457 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 502


>gi|148252196|ref|YP_001236781.1| hypothetical protein BBta_0602 [Bradyrhizobium sp. BTAi1]
 gi|146404369|gb|ABQ32875.1| hypothetical protein BBta_0602 [Bradyrhizobium sp. BTAi1]
          Length = 817

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 7/173 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +      A+     AL +SP        +   Y    +       L      +      
Sbjct: 640 LQRDRPQEAEAEYRAALRLSPHYATAAINLADLYRQRGQDGEGEAVLRTALVASP----R 695

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L  +  L          + +    + +L             +L S  ++  A  +L+
Sbjct: 696 DAALFYSLGLTLTRLRRPDDALNALARAAELEPERQRYVYVYGIALHSSGRREAAVSVLK 755

Query: 285 KIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
              + +P+      A I    +S +    L+ A +L  I     E   ++ ++
Sbjct: 756 DALRAHPNDSQILQALISFSRMSGDATSALRYAEQLAAIAPSDKELAALIQEL 808



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 18/202 (8%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                +  A       +++  E    R     A       +     +  +   +L+L  +
Sbjct: 606 ADRARFDLAAAEFIAAQRSNAERPEAR----TALGNFLLQRDRPQEAEAEYRAALRLSPH 661

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-------LSENTVGKL 311
              A+I  A     + +  + E +L      +P  + A  Y+           ++ +  L
Sbjct: 662 YATAAINLADLYRQRGQDGEGEAVLRTALVASP-RDAALFYSLGLTLTRLRRPDDALNAL 720

Query: 312 KRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
            RA  LE   +      V V  IAL   G  + A +    A++  P   +I   L    +
Sbjct: 721 ARAAELEPERQRY----VYVYGIALHSSGRREAAVSVLKDALRAHPNDSQILQALISFSR 776

Query: 370 ANSHNTDKILYWTQSALHAMPD 391
            +   T  + Y  Q A  A  D
Sbjct: 777 MSGDATSALRYAEQLAAIAPSD 798


>gi|289627881|ref|ZP_06460835.1| hypothetical protein PsyrpaN_22556 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289648310|ref|ZP_06479653.1| hypothetical protein Psyrpa2_11259 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330868419|gb|EGH03128.1| hypothetical protein PSYAE_14460 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL+ R       GD   +  D  ++  L   ++      A    +  +  +A   L
Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333
           +K        P  E+   Y    + +    + + KR  R   +      ++  S +    
Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            A  +    +            P +++F
Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 70/245 (28%), Gaps = 36/245 (14%)

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
            L                 +G  ++A  +   A        +       Y   L+   IA
Sbjct: 167 ALTRRRQAIQEQAAVDKAASGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIA 226

Query: 131 LAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
               QY  A         +    AT          +  R+GD + A++   +AL +  + 
Sbjct: 227 Q--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQALAVG-NL 280

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SLENADK 239
           P   +A +  Y    + S A+  L + +   +         A  L        +L+   +
Sbjct: 281 PLREQASL--YAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKR 338

Query: 240 GD------MIASYHDAIESLKLCDNSIMASIC--------AAKSLISQN---KKRKAEVI 282
            D             A  +++  D++   +          A    +        R+A   
Sbjct: 339 VDRSSGLKPREVQDAAYSAMRTPDDAQAIAYFKRVLDYQKAGDLQMPAQQVFDTRRAVSD 398

Query: 283 LEKIW 287
           L + W
Sbjct: 399 LSREW 403


>gi|330988366|gb|EGH86469.1| hypothetical protein PLA107_25305 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL+ R       GD   +  D  ++  L   ++      A    +  +  +A   L
Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333
           +K        P  E+   Y    + +    + + KR  R   +      ++  S +    
Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            A  +    +            P +++F
Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390


>gi|323453736|gb|EGB09607.1| hypothetical protein AURANDRAFT_63300 [Aureococcus anophagefferens]
          Length = 1652

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 107/374 (28%), Gaps = 68/374 (18%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             +   L+ R   +           + +     A  +           +     L     
Sbjct: 530 RRMSRSLYVRGERR-----------LGSGRYEDAADLFRECVALTPKDSYAWRALATALA 578

Query: 130 ALAERQYNIAHEKLE---------------MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           A    + + A +                     +    R  A   LY  +  +   ++  
Sbjct: 579 ADPGGRASDARDAFARGAAHCGSVHLVHAWASFEAAEQRHDAARGLYERALALDPASAYV 638

Query: 175 RYA------------TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AK 219
           R+A             KAL +  DA     A++        +   +  L         A+
Sbjct: 639 RHAWGVLERDVFHDDAKALALFEDASAAKSALLDVAAAETRYGGDVRRLRAHLLELLGAR 698

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRK 278
              R+ A++  A +       + +A+   A+E+      S  A++  A++        R+
Sbjct: 699 SPRRDDAVVYRAFARCAMSGDERVAALQRALEA---EPRSGAAAVELAEAYEDDLGDARR 755

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVES---- 327
           A   L       P       +         +   + +L+R     L++  +    +    
Sbjct: 756 ARAFLRSFLDGGPRNGTKARDPRGASQRRCAAKALARLERDAFGNLDQAARWYARALRED 815

Query: 328 ----------LVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376
                      +  ++ A+E G    A      A K  P R   ++ LA+++ A   + D
Sbjct: 816 SASGKPDCGVAIAAAECAVERGHHALARELLGRAAKAHPKRASPWIALAKLDVA-RGDRD 874

Query: 377 KILYWTQSALHAMP 390
                   AL A P
Sbjct: 875 AAERCFGVALKAEP 888



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 55/202 (27%), Gaps = 9/202 (4%)

Query: 63  RFFLSCPAMLFHMLHKR---NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            F    P         R         KAL   L   A  N+  A + ++   ++ +   +
Sbjct: 762 SFLDGGPRNGTKARDPRGASQRRCAAKALAR-LERDAFGNLDQAARWYARALREDSASGK 820

Query: 120 Y--LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
               V +   + A+    + +A E L    +    R     +L       GD ++A+R  
Sbjct: 821 PDCGVAIAAAECAVERGHHALARELLGRAAKAHPKRASPWIALAKLDVARGDRDAAERCF 880

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             AL   P     + A+       + W  A        K              A +    
Sbjct: 881 GVALKAEPTHGAASLAL--GKCRHEVWRDAEGA-KDAYKGGLATLHRDRETSRAYAQWAP 937

Query: 238 DKGDMIASYHDAIESLKLCDNS 259
                 A    A ++       
Sbjct: 938 ALWHAWAQVELAQDAHGRAATL 959


>gi|20090818|ref|NP_616893.1| hypothetical protein MA1970 [Methanosarcina acetivorans C2A]
 gi|19915884|gb|AAM05373.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 389

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 8/146 (5%)

Query: 134 RQYNIAHEKLEM-MLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            ++  A E  E  +L+ P   E  A       +        A      AL I PD     
Sbjct: 245 GRFEEALETYEKVLLRNPKYAEAWAGKGSVLSALDRK--EEALEAYLSALKIRPDYLEAL 302

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++V   +     +  A+   +   + A E       L   R L  ++      +      
Sbjct: 303 KSVGSLFSRLGRYEEALAAYDTALQAAPEAPE----LWAGRGLVLSELDRQEEALQSCSR 358

Query: 252 SLKLCDNSIMASICAAKSLISQNKKR 277
           +L+L      A     K L    +++
Sbjct: 359 ALELKPGFAPALEVKVKILSEIGRQK 384


>gi|326430118|gb|EGD75688.1| hypothetical protein PTSG_12640 [Salpingoeca sp. ATCC 50818]
          Length = 1330

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 115/335 (34%), Gaps = 48/335 (14%)

Query: 92  LMS---IAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           LM+   +A  N   A + + + +S      +  L ++L+ +I LAE +   A + ++  +
Sbjct: 544 LMAEIQLAMGNYGTALQALQNGLSYNFEIRDLPLYHVLQARIHLAEDKTTDALKSMQAAM 603

Query: 148 QIPATR------------------------EFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +IP  R                           +  ++  + R+ D       A      
Sbjct: 604 KIPGVRKVVQNTKTSRPVKRSAPVTDRVTVFLTLADVHIAANRLNDAAKVLTEAENQFRD 663

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           + +A  VT A  +  +   +   A+  L    +    + + +  +         DK    
Sbjct: 664 TAEAVRVTLAQSELALKRGDVEGALDLLRGVGREEPYYIQAKEKMAHIYLHHRKDKRVYA 723

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IAN--IY 299
           A Y + +E      +     +    + ++  +  KA  + E   K NP  +  +A+    
Sbjct: 724 ACYKELVEQNPTSHSY----LLLGDAYMAIQEPDKAINVYETALKQNP-RDGTLASKIGA 778

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--- 356
             + + +    +K        N E       ++++ L++ + D+A      A+  +    
Sbjct: 779 ALVRTHDFNRAIKYYEA-AVKNGEQPHLRSALAELHLKLKNFDKAKRVLEDALASSNQDT 837

Query: 357 ------RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
                   + + +LA++    S +    +   Q A
Sbjct: 838 IEGMVQTVKDYEMLARV-HKQSTDISAAIDTLQRA 871



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 33/230 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GDL +AQ  A   L ++         + +  +    +  A+  L        E  R+  
Sbjct: 518 SGDLVAAQSGAQHCLKMNTGFTEAHLLMAEIQLAMGNYGTALQALQNGLSYNFEI-RDLP 576

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKL-------------------CD--NSIMASIC 265
           +  + ++  +  +     +      ++K+                       + +   + 
Sbjct: 577 LYHVLQARIHLAEDKTTDALKSMQAAMKIPGVRKVVQNTKTSRPVKRSAPVTDRVTVFLT 636

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRL 317
            A   I+ N+   A  +L +    N   +        +A     L   +  G L     +
Sbjct: 637 LADVHIAANRLNDAAKVLTEA--ENQFRDTAEAVRVTLAQSELALKRGDVEGALDLLRGV 694

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKA-MLAMKIAPRKEIFLLLAQ 366
                  +++   ++ I L      + +A      ++  P    +LLL  
Sbjct: 695 GREEPYYIQAKEKMAHIYLHHRKDKRVYAACYKELVEQNPTSHSYLLLGD 744


>gi|308188821|ref|YP_003932952.1| Cellulose synthase operon protein C [Pantoea vagans C9-1]
 gi|308059331|gb|ADO11503.1| Cellulose synthase operon protein C [Pantoea vagans C9-1]
          Length = 1157

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 85/268 (31%), Gaps = 21/268 (7%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           ALA+   + A           ++  +A+  L   +    +  +A+++  +A  +      
Sbjct: 369 ALAQHDIDAAETHYRAAQTYDSSDSYALIGLGDVAMARKETAAAEQFWQRARRLDGTNIT 428

Query: 190 VTEAVVQQY--VLAKEWSRAITFLNQKKKN--AKEWNRNRAILLIARSLENADKGDMIAS 245
               +   Y  V        I  L   ++   A      R+  L A +   A +     +
Sbjct: 429 AVRRLAGLYQTVSPAREMEFINTLPAAQQRALADTIRTLRSDSLRAEADALAQQARWSQA 488

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-- 303
                ++ +L  + +  S   A +L +    ++A+ ++  + + +P    A   T L   
Sbjct: 489 VEKYRQARELSPDDVWLSYRLAGALRNSGAGQQADAVMRALPQQHPQDATALYATALWFS 548

Query: 304 -SENTVGKLKRALRL--EEINKESVESL--------VIVSKIALEMGSIDQAHAKAMLAM 352
            ++N    +    RL   + + +  E             ++     G        A+  +
Sbjct: 549 GNDNNSEAMATLHRLPDAQWSSDMRELADRLKQDQIFAQAEALRAAGQE----QAAVTLL 604

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILY 380
           +  P      L+         +  + L 
Sbjct: 605 EQQPVSTRRDLMLADWALERGDAQQALA 632



 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 101/314 (32%), Gaps = 51/314 (16%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++A H+I  A   +       +  +  L+ L    +A+A ++   A +  +
Sbjct: 360 WLAIEQGDKALAQHDIDAAETHYRAAQTYDSSDSYALIGL--GDVAMARKETAAAEQFWQ 417

Query: 145 MMLQIPATREFAVY---SLY------FESCRIGDLNSAQRYA--------------TKAL 181
              ++  T   AV     LY       E   I  L +AQ+ A               +A 
Sbjct: 418 RARRLDGTNITAVRRLAGLYQTVSPAREMEFINTLPAAQQRALADTIRTLRSDSLRAEAD 477

Query: 182 DISPDAPWVTEAVVQQYVLAKE----W-----------SRAITFLNQKKKNAKEWNRNRA 226
            ++  A W       +          W           S A    +   +   + +   A
Sbjct: 478 ALAQQARWSQAVEKYRQARELSPDDVWLSYRLAGALRNSGAGQQADAVMRALPQQHPQDA 537

Query: 227 ILLIARSL---------ENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKK 276
             L A +L         E       +     + +  +L D      I A A++L +  ++
Sbjct: 538 TALYATALWFSGNDNNSEAMATLHRLPDAQWSSDMRELADRLKQDQIFAQAEALRAAGQE 597

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           + A  +LE+   V+   ++      L   +    L    ++     ++ ++ +   +  +
Sbjct: 598 QAAVTLLEQQ-PVSTRRDLMLADWALERGDAQQALAGYQQVLSRQPDNGDAALGRIEALV 656

Query: 337 EMGSIDQAHAKAML 350
            +    +A      
Sbjct: 657 ALQRNSEARQALAQ 670


>gi|88706362|ref|ZP_01104067.1| TPR domain protein [Congregibacter litoralis KT71]
 gi|88699298|gb|EAQ96412.1| TPR domain protein [Congregibacter litoralis KT71]
          Length = 576

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 13/196 (6%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GDL  A      A+  SP  P    A          ++ A   L Q    A        
Sbjct: 18  SGDLVGADGSFRAAIAASPGQPQAMLAYATFLRNQGRFAEAQDQLQQALAGAPNSPEVWQ 77

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L    +  +  +     +     ++ +L   +      AA     Q    +A  +  + 
Sbjct: 78  AL----ARLHYQQESWQEAQRCITKATELAPQAPPLWELAAAIAQKQGDVAQALALCRQG 133

Query: 287 WKVNP-----HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              NP     H  +A +   L  E + V       +  ++  +  +     ++  L+ G 
Sbjct: 134 IGHNPKASRLHYSLAQL---LRQECDFVEAAAAYEQALKLGFDQPDLYRNRAEALLDAGD 190

Query: 341 IDQAHAKAMLAMKIAP 356
           I+ A A A   ++  P
Sbjct: 191 IEAALACANTGVERFP 206



 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 79/261 (30%), Gaps = 34/261 (13%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----------- 213
              G    AQ    +AL  +P++P V +A+ + +   + W  A   + +           
Sbjct: 50  RNQGRFAEAQDQLQQALAGAPNSPEVWQALARLHYQQESWQEAQRCITKATELAPQAPPL 109

Query: 214 -------KKKNAKEW------------NRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                   +K                 N   + L  + +     + D + +     ++LK
Sbjct: 110 WELAAAIAQKQGDVAQALALCRQGIGHNPKASRLHYSLAQLLRQECDFVEAAAAYEQALK 169

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK--L 311
           L  +        A++L+       A        +  P HP +      L   +   +  L
Sbjct: 170 LGFDQPDLYRNRAEALLDAGDIEAALACANTGVERFPGHPLLQRTAAQLSFSSGAQRDHL 229

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQA 370
           ++     +    +      + ++   +G   +       A ++  P      +L  ++ A
Sbjct: 230 EKLRAAVKREPRNPALWQTLVQLMKRLGEESRVEETLRDAQRLGCPETPSLQVLGALDMA 289

Query: 371 NSHNTDKILYWTQSALHAMPD 391
                 + L   +    A PD
Sbjct: 290 QRGEKSEALNRLEQISLANPD 310


>gi|330887779|gb|EGH20440.1| hypothetical protein PSYMO_02654 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL+ R       GD   +  D  ++  L   ++      A    +  +  +A   L
Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333
           +K        P  E+   Y    + +    + + KR  R   +      ++  S +    
Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            A  +    +            P +++F
Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390


>gi|320353060|ref|YP_004194399.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320121562|gb|ADW17108.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 711

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 8/170 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +   A  +  A   +      H   +  L+  L +  A        A +  + ++   
Sbjct: 535 GELHFMAGKVDAAADYYRQAVNVH--KDPGLLIKLGLH-AEQTGNNEDAAKYYQEVIDTF 591

Query: 151 ATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            T       L +   + G +L++A R A KA ++ P    + + +   +   K++  A +
Sbjct: 592 PTFFVGYNQLAWLYAKRGVELDTAMRLAQKADELQPGNASILDTIGWIHFQKKKFDAAAS 651

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            L +  ++      N   +L         +G   A+      +L+L    
Sbjct: 652 HLEKALESNP----NNPTILYHLGRTLLAQGKSDAAMGHLRRALELSPKF 697



 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 15/163 (9%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
               Y  +       +++      A Y L      +G    A +   K+L++ P      
Sbjct: 223 LTGDYERSIASFSKAIELNRNAYAAHYGLGVVYETLGKNKEAMQALQKSLELRPGNASAL 282

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           E + +  +       A+   N+      +     A +L+  +L  A K D       AI 
Sbjct: 283 ETLGKLQLKEGLIEAALQTGNEMASKNMDG----AFVLLGDALLQAGKTDE------AIA 332

Query: 252 SLKLCDN---SIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           SLK        +          + Q +   AE ++E + K++P
Sbjct: 333 SLKKAPQGGAEVP--YLLGYCEMVQGRYEAAERLMEDVLKIDP 373



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 67/202 (33%), Gaps = 11/202 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G+++SA  +A + + + P    V            + + A   LN  K+   
Sbjct: 81  LMKQEFARGNIDSAGYFAEQLVPLRPQEADVHAIYSISLAATGKNAEAREQLNAAKRLGP 140

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +        L A ++    + +   +     +++ L            +         KA
Sbjct: 141 D----TLFTLAAEAIILQREKNYTEAIKKCEQAIALNATHPYPRNILGRVYADMGHHAKA 196

Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
               +K  ++    +    Y +L     L+ +    +    +  E+N+ +  +   +  +
Sbjct: 197 LDCFQKAVELKV--DFLLGYINLGAVSYLTGDYERSIASFSKAIELNRNAYAAHYGLGVV 254

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
              +G   +A      ++++ P
Sbjct: 255 YETLGKNKEAMQALQKSLELRP 276



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 65/196 (33%), Gaps = 9/196 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +  D   A ++ T A+  +P       A+ + + +A +   A  +  Q     K+    
Sbjct: 505 LQKKDRAQAMQFFTSAVQEAPKFFAALYALGELHFMAGKVDAAADYYRQAVNVHKDPG-- 562

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVIL 283
              LLI   L     G+   +     E +       +     A     +  +   A  + 
Sbjct: 563 ---LLIKLGLHAEQTGNNEDAAKYYQEVIDTFPTFFVGYNQLAWLYAKRGVELDTAMRLA 619

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  ++ P +  I +   + H   +          +  E N  +   L  + +  L  G 
Sbjct: 620 QKADELQPGNASILDTIGWIHFQKKKFDAAASHLEKALESNPNNPTILYHLGRTLLAQGK 679

Query: 341 IDQAHAKAMLAMKIAP 356
            D A      A++++P
Sbjct: 680 SDAAMGHLRRALELSP 695


>gi|283779986|ref|YP_003370741.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283438439|gb|ADB16881.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
          Length = 556

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 124/322 (38%), Gaps = 24/322 (7%)

Query: 87  ALYTGL---MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV--QIALAERQYNIAHE 141
           AL TG+    +       L +     +S +     E ++ L E   +  L + Q   A E
Sbjct: 24  ALATGIPHAFAAGEGQAELDQATELQLSAETLADLEKIITLTESALKKGLDDGQAGFAKE 83

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALDISPDAPWVTEAVVQQ 197
            L       A R  A  +++ ++         ++YA     KAL  +P  P     + + 
Sbjct: 84  MLAATAYQHAERLAA--AIFEQTPPSPKWPLIRQYALRDLEKALANNPKLPDAHVLLAKL 141

Query: 198 YVL-AKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            VL   +   A+  L++  K    ++  R  + +L+ R+  + D+   +A    A+++  
Sbjct: 142 NVLPGGDTKIAMDSLDEAIKLLKKEDNVRELSKILVLRAALSEDEEKKLADLSAAVDA-- 199

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHP--EIANIYTHLLSENTVG 309
               ++ A    A   + + +  KA   L+K+ + N   P     ++  +T+L   +   
Sbjct: 200 -DPENVEAWQGRALIYLEKGENDKAVEDLKKLVEKNGDNPTAIAALSEAFTNLKKYDEA- 257

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            L +A +L E+  +      + S+I +    +  A      A++I+P     LLL     
Sbjct: 258 -LAQANKLIEVAPKLSLGYTLRSRIYVLKDDLKSALKDLDEALEISPDDLGALLLRSRLH 316

Query: 370 ANSHNTDKILYWTQSALHAMPD 391
           A   N        + AL   PD
Sbjct: 317 AAEGNDAAAKADVEKALAVRPD 338



 Score = 43.4 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 85/244 (34%), Gaps = 18/244 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNE----YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
            +  +A  M S          E     L  +L ++ AL+E +     +    +   P   
Sbjct: 147 GDTKIA--MDSLDEAIKLLKKEDNVRELSKILVLRAALSEDEEKKLADLSAAVDADPENV 204

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           E             G+ + A     K ++ + D P    A+ + +   K++  A+   N+
Sbjct: 205 EA-WQGRALIYLEKGENDKAVEDLKKLVEKNGDNPTAIAALSEAFTNLKKYDEALAQANK 263

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             + A       ++    RS     K D+ ++  D  E+L++  + + A +  ++   ++
Sbjct: 264 LIEVAP----KLSLGYTLRSRIYVLKDDLKSALKDLDEALEISPDDLGALLLRSRLHAAE 319

Query: 274 NKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESL 328
                A+  +EK   V   P++                    +     L + + ++ E  
Sbjct: 320 GNDAAAKADVEKALAVR--PDLPQAIMLRSLLAAQKGKIAEAVADLQLLLQADPQNAEYR 377

Query: 329 VIVS 332
           + ++
Sbjct: 378 LQLA 381


>gi|300897293|ref|ZP_07115729.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
 gi|300358941|gb|EFJ74811.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
          Length = 744

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 171 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 230

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K    +  +      V        + + A    NQ      +
Sbjct: 231 TEVDIAAGDKAAARSQLAKLPATNNASLNTQRRVALAQAQLGDTAAAQQTFNQLIPLAKS 290

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 291 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 325



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 82/273 (30%), Gaps = 36/273 (13%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALD 182
           E  IA        + + +E  LQ           L  ++      G    A     + L 
Sbjct: 25  EAFIASLSASQRRSIDDIERSLQNDR--------LAQQAEALENQGKWTQAAALQRQRLA 76

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P + W+T  + Q    A + S+A   L +     K  +  +          +      
Sbjct: 77  LDPGSVWITYRLSQDLWQAGQRSQA-DTLMRNLAQQKPNDPEQVYAYGLYLSGHGQDRAA 135

Query: 243 IASYHDAIES----------LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +A  +    +           +L  + +   +  A  L    K+ +AE +L    +  P 
Sbjct: 136 LAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRESGKEAEAEAML----RQQP- 187

Query: 293 P----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P    ++    +     + T  +      L      + ++++ ++++ +  G    A ++
Sbjct: 188 PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAILGLTEVDIAAGDKAAARSQ 246

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
                              + QA   +T     
Sbjct: 247 LAKLPATNNASLNTQRRVALAQAQLGDTAAAQQ 279


>gi|254498044|ref|ZP_05110805.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254352744|gb|EET11518.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 389

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/204 (9%), Positives = 67/204 (32%), Gaps = 45/204 (22%)

Query: 93  MSIAA-----HNIPLARKMHSYVSQQ----HTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           +++ +       +  A ++H  +  +         E L+ L   Q  ++   ++ A    
Sbjct: 73  LALGSLFRRRGEVDRAIRIHQNLIARPQLSILQRKESLMAL--GQDYMSAGVFDRAERIF 130

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +++                   G   ++                    ++  Y   K 
Sbjct: 131 LEVVE------LG-----------GSKETS----------------SLHGLLAIYQQEKA 157

Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           W +A+  + + +      ++   A      + +     ++  + +   +++ +   S+ A
Sbjct: 158 WEKALDVIKKLEITTGTSFHTQAAHYYCEMATQALKANNVDKAAYCIKQAINVDAESVRA 217

Query: 263 SICAAKSLISQNKKRKAEVILEKI 286
           S+  A   + + + ++A   L+++
Sbjct: 218 SLMHASIEMKEGRYKQAIRSLKRV 241


>gi|114051830|ref|NP_001040185.1| DnaJ (Hsp40) homolog 9 [Bombyx mori]
 gi|87248313|gb|ABD36209.1| DnaJ-like protein isoform A [Bombyx mori]
 gi|253721959|gb|ACT34043.1| DnaJ-9 [Bombyx mori]
 gi|257122608|gb|ACV41273.1| DNAJ9 [Bombyx mori]
          Length = 515

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 16/181 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            L + +      +   A E    +L++    T    V  L        +   A ++  + 
Sbjct: 196 KLTKAECLALLGRCQEAQEIANDLLRLDSQDTEAIYVRGLCLYFEDRDEQ--AFKHFQQV 253

Query: 181 LDISPDAPWVTEA-----VVQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD     E      +++Q             W +A+   N+     K      A L
Sbjct: 254 LRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTVNAKL 313

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              ++   A    +  +      +L+L +N + A +  AK      +  +A    E+++K
Sbjct: 314 HFNKATVCAKLNMLNETAEACTAALELDENYVKALLRRAKCYTELGEYEEAVKDYERLYK 373

Query: 289 V 289
           +
Sbjct: 374 I 374


>gi|260430855|ref|ZP_05784827.1| transcriptional regulator domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418296|gb|EEX11554.1| transcriptional regulator domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 452

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 20/226 (8%)

Query: 157 VYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAV---VQQYVLAK-----EWSRA 207
           +  L       G    +A     +A+++          +   +  ++        +   A
Sbjct: 206 LRGLPELYRFEGQSYETAMSLFRRAVELDSGYAQAHSYLAWCLNFWIAEGKSSNVDRDSA 265

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICA 266
               + +K    E +   A+ L  R  + +  +     +     ++L L  N  +A   +
Sbjct: 266 TAVFHARK--GVELDPEDALNLSIRGHILSLLEHRPHEAVDIMDQALSLNPNLPLAWGIS 323

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEI 320
           A +         A   +  +W++ P   +      A      +  +    ++   R    
Sbjct: 324 ATAHAYLGNGAIAREHMLNVWRLTPFGPLNFFFWTAVGLAEFVDGDYPEAIRALQRARRT 383

Query: 321 NKESVES-LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
               + +  ++ +  AL+ G I+QA A A   ++  P   I   +A
Sbjct: 384 KPRFMAALRLLAASYALD-GQIEQARATAEKLLEKDPGFSISRFMA 428


>gi|291613082|ref|YP_003523239.1| hypothetical protein Slit_0612 [Sideroxydans lithotrophicus ES-1]
 gi|291583194|gb|ADE10852.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
          Length = 834

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 41/266 (15%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + +Y    +    M     +  F   +L      +G    A +   +A++++P   
Sbjct: 157 ALFNQGRYQDVADSARAMTMQFPSHSFGWATLGVVLQHLGRNEEALQPMQRAVELAPKDA 216

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA----------- 237
                +            A T   +  K  K++    A L +  +L +            
Sbjct: 217 QAHSNLGNTLSYLGRLDEAETSFRRALKINKDF--AEAHLNLGATLHDLGRFGEAEVSYR 274

Query: 238 ---------------------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                 +G +  +     ++L++    + AS     +L +Q K 
Sbjct: 275 CAIQLKPGLAEAHYNLGNTLKSQGKLEEAVASYRKALQIAPGLVGASSNLGAALQAQGKL 334

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRA----LRLEEINKESVESLVIV 331
            +AE IL  + + N  P+    Y++L S  + +G+L+ A     +   I  +  E L  +
Sbjct: 335 AEAETILRNVLQSN--PDSLEAYSNLGSTLHDMGRLEEARSEYEKALRIKPDHAEILSNL 392

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
               + MG  ++A      A++  P 
Sbjct: 393 GNTLMTMGLQEEAVRCFRDALEYKPD 418


>gi|206891179|ref|YP_002248164.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206743117|gb|ACI22174.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 437

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/343 (12%), Positives = 112/343 (32%), Gaps = 44/343 (12%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A++    + ++   H + L+ L    +++ E  Y  A +  +   ++       ++S+  
Sbjct: 103 AKEALQEILKEEPEHIDALIRL--GDLSMKEEDYKTALKYYKKAYELDPKNIVPLFSIEN 160

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              ++ +   A +Y  +  ++ PD+P     +       ++W   I    +  K   E+ 
Sbjct: 161 VMEKMNENELALKYIEQITNLEPDSPLAHYKMRNILERLEKWEDLIVLQKKILKLVPEYK 220

Query: 223 R----NRAILLIA-RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           +     R +         + + G++  +       +K   + I A +  A+ +IS+    
Sbjct: 221 KSEEERRLVGYTYEYGRVSLESGEIEQAERIFSNLVKTSSDFIPAYLGLAEVIISKEGVE 280

Query: 278 KAEVILEKIWKVNPHPEI-------ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           +A   L+K ++     ++             +   +    ++  L+      + +E   +
Sbjct: 281 EAIDFLKKCYE-----DLKSKLLLIRLEDLLISIGDPKRLIQFYLKAINEKPDDIELKFL 335

Query: 331 VSKIALEMGSIDQAHAKA---MLAMKIAPR----------KEIFLLLAQIEQANSHNTDK 377
           + ++   +  ID A         A+   P+          +      A  E        K
Sbjct: 336 LGRLYYRLEMIDDAIETLSSIDPAICSTPKLHCIKGYLYLRRNQTTKAVSEFKQLCPETK 395

Query: 378 ILYWTQSALHAMPDPLWISDDGY-LSSVWLPLSPISKTLCYFE 419
           +               ++  + +     W     +  T   FE
Sbjct: 396 VSNL-----------SYLCRECHSTFEEWTGRCSVCGTWNSFE 427


>gi|83309807|ref|YP_420071.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
           magneticum AMB-1]
 gi|82944648|dbj|BAE49512.1| Predicted O-linked N-acetylglucosamine transferase
           [Magnetospirillum magneticum AMB-1]
          Length = 758

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 67/222 (30%), Gaps = 21/222 (9%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              + R+   A       L +      A++ L     + G L  +  +   AL + P+  
Sbjct: 107 ALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQSALALRPNFV 166

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +          + A+  L +            A L           G  I +   
Sbjct: 167 EALANMAGVLSRLGRPAEAVEKLRRAVAERP----GEASLQADLGRALLASGHRIEADVA 222

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
              +L+L  +S    + AA  + ++ +  +A   LE   +             L      
Sbjct: 223 VCRALRLAPDSPPILVAAADVIRARGRMEEA---LEHAARA----------AELAPNYPP 269

Query: 309 GKLKRALRLEEINKES--VESLVIVS--KIALEMGSIDQAHA 346
             L  A +L  + +     E+ + ++  + A      D A+A
Sbjct: 270 AVLMLARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANA 311



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 29/222 (13%)

Query: 154 EFAVYSLYFESC--------RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
             A+   + E+         R+G    A     +A+   P    +   + +  + +    
Sbjct: 158 ALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASGHRI 217

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A   + +  + A +       +L+A +     +G M  +   A  + +L  N   A + 
Sbjct: 218 EADVAVCRALRLAPDSPP----ILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLM 273

Query: 266 AAKSLISQNKKRKAEVI------LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
            A+ L +  ++  +         +E          +A+++    + N + +L  A+ L +
Sbjct: 274 LARQLRAMGRRDLSAETYLRLAGIEGA-------GVAHLFDAANALNEMSRLPEAVALYQ 326

Query: 320 --INKESVESLV--IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             + +E   S V   +     E+G +D+A      A +++P 
Sbjct: 327 ALLAREHDHSEVWNNLGNALRELGELDRAAECYETAERLSPD 368


>gi|17229191|ref|NP_485739.1| hypothetical protein all1699 [Nostoc sp. PCC 7120]
 gi|17135519|dbj|BAB78065.1| all1699 [Nostoc sp. PCC 7120]
          Length = 293

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 47/145 (32%), Gaps = 16/145 (11%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------- 176
           +L  Q          A      +L        A+  +           +A          
Sbjct: 121 VLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGMVVLLLDQQRPEAAVGLLQDTLTN 180

Query: 177 ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIAR 232
           A +A  I P +      + ++   +   K + +AI+  +Q  +K+ K++       ++A+
Sbjct: 181 AAQANTIQPGSVDVVAVQVLLGNVHAAQKRYPQAISAFDQAIQKDTKDFRP-----VLAK 235

Query: 233 SLENADKGDMIASYHDAIESLKLCD 257
           ++    +G    +      +L L  
Sbjct: 236 AMLLKQQGKATEAKPLFDSALALAP 260


>gi|298530387|ref|ZP_07017789.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509761|gb|EFI33665.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 205

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 37/118 (31%), Gaps = 6/118 (5%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +++ + R  D  +A++Y  +A+  SPD       +    +   +     ++     K  
Sbjct: 31  GVHYMALR--DFETARQYLQEAIRKSPDLAEAYVQLGGIAMNEGDLDGCFSYNEMASK-- 86

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                  A+        +  +GD+  +      ++      + A      +   Q   
Sbjct: 87  --IRHRFAVPHGNMGFVHLQRGDVDKAIASLKRAISFDPQFVQAHATLGNAYYMQGDL 142


>gi|209527318|ref|ZP_03275827.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209492244|gb|EDZ92590.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 300

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 14/168 (8%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             +A  +                 +L  Q          A +    +L+       A+  
Sbjct: 95  GQVADVVEPLQRLAQLHPETPEYGILLAQAQEYTGNPEGAAQSYRRILEQRPGEVQALQG 154

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLAKEWSRAIT 209
           L           +A       L  +P         +            Y   + +  AI 
Sbjct: 155 LVSLLISQNRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQQRYQEAIA 214

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             ++  KN++   R     ++A+++    +G+   +     E++ L  
Sbjct: 215 VYDEAIKNSESDFRP----VLAKAIILRQQGNPEDAELLFAEAIDLAP 258


>gi|91781716|ref|YP_556922.1| hypothetical protein Bxe_A4130 [Burkholderia xenovorans LB400]
 gi|91685670|gb|ABE28870.1| Putative membrane protein [Burkholderia xenovorans LB400]
          Length = 613

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 102/325 (31%), Gaps = 54/325 (16%)

Query: 108 SYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--L 160
           +    Q +     L       +L  ++AL   Q   A++    + +       A  +  +
Sbjct: 67  ASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEI 126

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +    D  +A +        +P++    +      VL+     A   L ++      
Sbjct: 127 ALAAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGRPDDAEPILARELARVPA 183

Query: 221 WNRNRAILLI--------------------------------ARSLENADKGDMIASYHD 248
            NR  AIL +                                A + +     D   +   
Sbjct: 184 DNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDLNRPEAQLALARQQLVSDDAPGARKS 243

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSE 305
             ++L L  + + A++  ++      ++++    LEK  + NP  H   +A    +L S+
Sbjct: 244 LEQALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASD 301

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---E 359
                 K+   +   N   +  L+ ++ I ++  + ++A           +  P     +
Sbjct: 302 RLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPGQ 361

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384
            ++ LAQ+      N      W   
Sbjct: 362 AYIYLAQL-SLEQKNDAAASDWLNK 385


>gi|15669131|ref|NP_247936.1| hypothetical protein MJ_0941 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3915952|sp|Q57711|Y941_METJA RecName: Full=TPR repeat-containing protein MJ0941
 gi|2826352|gb|AAB98947.1| hypothetical protein MJ_0941 [Methanocaldococcus jannaschii DSM
           2661]
          Length = 338

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 60/198 (30%), Gaps = 15/198 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREF 155
            ++ + RK    V        E +  +L     L E     A      + +   P     
Sbjct: 12  GDMRMNRKRTPRVDTL-----EAVANVLRAYRELFEGNLIKAL-YYVDKALELEPDFYLA 65

Query: 156 A-VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +  L   +   G++  A     + L      P     V Q Y ++     A+   N+ 
Sbjct: 66  LFLKGLALSAK--GEIKEAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALKCYNKA 123

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                E     A LL    LE    G+         E L    N +   +  A+ L    
Sbjct: 124 L--GIENRFLSAFLLKTICLEFL--GEYDELLKCYNEVLTYTPNFVPMWVKKAEILRKLG 179

Query: 275 KKRKAEVILEKIWKVNPH 292
           +   A + L +  ++ PH
Sbjct: 180 RYEDALLCLNRALELKPH 197


>gi|311693601|gb|ADP96474.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15]
          Length = 592

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 86/304 (28%), Gaps = 44/304 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEY----------LVYLLEVQIALAERQYNIAHEKL 143
           +          K  +  + + T               L  LL  +IA    +Y+I     
Sbjct: 31  ASLTGTEEAPAKSETVAAGEKTEPQPPVEYADFEPETLYLLLSAEIAAQRGRYDITLVNY 90

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
               +    +     +    +  +   N+ ++ A   LDI PD          Q V   +
Sbjct: 91  LKAAKQSRDQVVIERA-MRIAQSLNGDNAQKQLAELWLDIDPDNLQAHRISAIQAVKGND 149

Query: 204 WSRAITFLNQKKKNAKEW--------------NRNRAILLIARSLENADKGDMIASYHDA 249
              AI  + +      +                + + +L +   + +         Y  A
Sbjct: 150 LQTAIHHMERIMDQGGDADFDSLAAIAANLPPEQQQELLALYNEMSDRHPDTPELEYSIA 209

Query: 250 I---------ESL-KLCD------NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292
           +         ++L +L        N   A I     L    +K  A   L    +  P +
Sbjct: 210 LLLKVTGQPQQALDRLEPLLQENANFQPAIILKGDLLYQTGQKSSALDYLLTNTRRFPGN 269

Query: 293 PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            ++  +Y    +             RL +   ++    +  + +ALE G  D A  +   
Sbjct: 270 RQMGTLYGRMLINEGELQAAQDEFNRLVKRYPDTPGLRLSHALVALENGQTDLARQELTQ 329

Query: 351 AMKI 354
             + 
Sbjct: 330 LAEQ 333



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 5/127 (3%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           AT+AL+  PD   +  A    Y    + + A        K   E     A+ L A     
Sbjct: 429 ATEALEEHPDNIEIRYARAMLYDGIGQPADA----EADLKRIIEQEPENAVALNALGYIL 484

Query: 237 ADKGDMI-ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             + D +  +     ++L+L  N+          L  + +   A   L + W   P PE+
Sbjct: 485 TTRTDRLREARGYIEKALRLDPNNPAILDSMGWVLFLEGQLEPALEYLSRAWAAFPDPEV 544

Query: 296 ANIYTHL 302
           A  Y   
Sbjct: 545 AAHYGEA 551


>gi|313498608|gb|ADR59974.1| Bacteriophage N4 receptor, outer membrane subunit [Pseudomonas
           putida BIRD-1]
          Length = 1001

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 15/143 (10%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQR 175
           +    L       A      A      +         R  A       +   GD ++A+R
Sbjct: 491 DPGNRLPLAYALEAAGDSETAQPIWRSLPDSAFTDNARLTAARG----ALNAGDADAARR 546

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           Y   A   S    W   A + Q     +   A+ F  Q   ++   +   A    A+   
Sbjct: 547 YWDAAAHQS-ADDWALGAAIAQR--QGDPQAALGFQRQALAHSPRADHYYAASSTAQL-- 601

Query: 236 NADKGDMIASYHDAIESLKLCDN 258
               GD   S     E+++L  N
Sbjct: 602 ---AGDSAQSTAWLAEAVRLAPN 621



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 8/93 (8%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATRE 154
           AA +   A+ +   +       N  L      + AL     + A    +    Q      
Sbjct: 504 AAGDSETAQPIWRSLPDSAFTDNARLT---AARGALNAGDADAARRYWDAAAHQSADDWA 560

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                    + R GD  +A  +  +AL  SP A
Sbjct: 561 LG----AAIAQRQGDPQAALGFQRQALAHSPRA 589


>gi|224085786|ref|XP_002307696.1| predicted protein [Populus trichocarpa]
 gi|222857145|gb|EEE94692.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 11/195 (5%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257
             +  A        + A+        LL        +    +G ++++     E+  LC 
Sbjct: 278 GRYKEAKEEFLLALEAAEAGGNQWGYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCP 337

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
               A      +L    + + A   LE+   + P     H ++A+   H + E+    ++
Sbjct: 338 THFRALKLLGSALFGVGEYKAAVKALEEAIFMKPDYADAHCDLASA-LHAMGEDEKA-IE 395

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              +  ++    V++L  +  + +++G   +A       + + P      L   +    +
Sbjct: 396 VFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGA 455

Query: 373 HNTDKILYWTQSALH 387
             T++     + AL 
Sbjct: 456 GETEEAKKALKEALK 470



 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 54/186 (29%), Gaps = 35/186 (18%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           SA  Y  +A  + P      + +        E+  A+  L +      ++    A   +A
Sbjct: 324 SACEYYREAAILCPTHFRALKLLGSALFGVGEYKAAVKALEEAIFMKPDY--ADAHCDLA 381

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +L     G+   +     +++ L    + A        +   + ++A            
Sbjct: 382 SALHAM--GEDEKAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRAS----------- 428

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                 +YT +              L         + +  +   L  G  ++A      A
Sbjct: 429 -----EMYTRV--------------LAVW-PNHWRAQLNKAVSLLGAGETEEAKKALKEA 468

Query: 352 MKIAPR 357
           +K+  R
Sbjct: 469 LKLTNR 474


>gi|194363907|ref|YP_002026517.1| HemY domain-containing protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194346711|gb|ACF49834.1| HemY domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 431

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 129/394 (32%), Gaps = 20/394 (5%)

Query: 4   LIRYFFVISLVICSFIIVS----HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           L+     +++ + +   +     +   +V++ +G   Y ++   +  +    +    LL+
Sbjct: 7   LVVLLLAVAIGVVAAQWLGADDLNRFGEVTLRYGGYDYHSNLPKVALLSVVAVLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           ++                +    +G   L  GL +        A K+    ++       
Sbjct: 67  SLIAAPF-------RAWGRYRRKQGRVRLIDGLQAYEHGQWQRAEKLLDGAAKDPEVSAV 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178
            L     V+ A A          L+ + +  AT +  + +    +  +  D  +A   A 
Sbjct: 120 ALAN--AVRSAQARADGAAGEALLQRLGESDATLQALLRAEQLLARDLPVDAINALDVAA 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
               + P   W+    + Q   A E    +  L Q K    + N      L A++L  A 
Sbjct: 178 -IQPLPPRGLWLRTEALAQAGRAHEAYGQLGALRQSKVLPADANSELEARLAAQALLEAA 236

Query: 239 KGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             + +A+  +A  ++L+   + + A    A +L        A + LE         E+  
Sbjct: 237 DVNALAAQWEATPKALRPTPDVVGAYASRAVALSWDE---PALLALEHALDQRWDDELVA 293

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +Y  L +E    +     R   ++  S    +   ++AL     D A A    A+     
Sbjct: 294 LYGRLPAERLATRQANLARWRNVHDSSAALRLAQGRVALGQQQWDAADAFLHEAIAAGAG 353

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +  L ++  A   +         +AL     
Sbjct: 354 APAWEALGEL-FAQRGDHALAAQCLANALRLQRG 386


>gi|146313559|ref|YP_001178633.1| cellulose synthase subunit BcsC [Enterobacter sp. 638]
 gi|145320435|gb|ABP62582.1| cellulose synthase operon C domain protein [Enterobacter sp. 638]
          Length = 1160

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 61/168 (36%), Gaps = 6/168 (3%)

Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL  Q   AL     + A    +    I  T  +AV  L   +    D  +A+R+  +AL
Sbjct: 354 LLIQQGDAALKANNISQAERHYQQARNIDNTDSYAVLGLGDAAVARKDNAAAERFYRQAL 413

Query: 182 DISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENA 237
            +          +   Y     ++  + I  L   ++ + +          L  ++ +  
Sbjct: 414 RMDSGNSNAVRGLANIYRAQSPEKADQFIQSLTASQRRSIDDIQRSLDNDRLAQQAEQLE 473

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           ++G    +       L L   ++  +   ++ L S  ++ +A+ ++ +
Sbjct: 474 NQGSFAQAAEIQRRRLALDPGNVWITYRLSRDLYSAGQRSQADTLMRQ 521



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 108/337 (32%), Gaps = 28/337 (8%)

Query: 66  LSCPAMLFHMLHKRNYDK--GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY--- 120
            +      H    RN D    Y  L  G  ++A  +   A + +    +  + ++     
Sbjct: 366 NNISQAERHYQQARNIDNTDSYAVLGLGDAAVARKDNAAAERFYRQALRMDSGNSNAVRG 425

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYA 177
           L  +   Q      Q+  +    +        R      L  ++ +    G    A    
Sbjct: 426 LANIYRAQSPEKADQFIQSLTASQRRSIDDIQRSLDNDRLAQQAEQLENQGSFAQAAEIQ 485

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARS 233
            + L + P   W+T  + +    A + S+A   L ++  + K  +  +       L   +
Sbjct: 486 RRRLALDPGNVWITYRLSRDLYSAGQRSQA-DTLMRQLASQKPGDPEQVYANGLYLSGNN 544

Query: 234 LENADKGDMIASYHDAIESL--KLCDNSIMASIC-AAKSLISQNKKRKAEVILEKIWKVN 290
            + A    +     D       +L D      +   A  L    ++R+AE +L    +  
Sbjct: 545 QDRAALAHLNTLSRDKWNGNIQELADRLQGDQVLETANRLRDSGQEREAETLL----RQQ 600

Query: 291 PHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           P     ++    +     +    K   +  L +   ++ ++++ ++++ L  G  D A A
Sbjct: 601 PQSTRIDLTLADWAQQRGDRASAKAAYSTVL-QHEPQNTDAILGLTEVYLSEGDKDAARA 659

Query: 347 KAMLAMKIAPRKEIFLLL---AQIEQANSHNTDKILY 380
           +          +   + +     + QA   +T     
Sbjct: 660 QLATLPAGQNSEPPSVNMQRRVALAQAELGDTAAAEQ 696



 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 12/160 (7%)

Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R        +     +     + L     A        A      +LQ       A+  L
Sbjct: 585 RDSGQEREAETLLRQQPQSTRIDLTLADWAQQRGDRASAKAAYSTVLQHEPQNTDAILGL 644

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-----YVLAKEWSRAITFLNQ-- 213
                  GD ++A+  A  A   +          +Q+          + + A    ++  
Sbjct: 645 TEVYLSEGDKDAAR--AQLATLPAGQNSEPPSVNMQRRVALAQAELGDTAAAEQTFSKLV 702

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +  ++  + + A++L   +   A  G    +     +++
Sbjct: 703 PQAKSQPPSMDSALVLRDAARFQASNGQPQQALESYKDAM 742


>gi|300112905|ref|YP_003759480.1| tetratricopeptide repeat-containing protein [Nitrosococcus watsonii
           C-113]
 gi|299538842|gb|ADJ27159.1| tetratricopeptide repeat protein [Nitrosococcus watsonii C-113]
          Length = 387

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 84/222 (37%), Gaps = 21/222 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNR 223
            R G L+ A+    +AL            ++  Y   K W +AI    + ++++ +    
Sbjct: 118 MRAGMLDRAESSFLEALKRRSHIGITLRQLLDLYQQEKNWYQAIAMAQKLREESGEATES 177

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      + +   +     +     ++L      + A++  ++  I +   ++A   L
Sbjct: 178 MIAHFYCELAEQRWVQRQAAETTWFIKQALASDWRCVRATLLQSRLAIEKGDYKRAIRCL 237

Query: 284 EKIWKVNPH--PE----IANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL 336
            ++ + +P   PE    ++  Y HL  ++          L E ++     + +I++K A 
Sbjct: 238 RQVERQDPDYLPEILKPLSECYRHLEGQDEF-----FFWLTEASERHPGCTSLILAKAAY 292

Query: 337 --EMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-----QIEQA 370
             + G   +A    +  +++ P  E    LLA      IE A
Sbjct: 293 LQQRGKQKEARYFLIEQLRVYPSVEALQQLLALGVPEDIEAA 334


>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 374

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 19/220 (8%)

Query: 146 MLQIPATREF---AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           M    A +      +  L     + GD ++A      A+ ++P+       +       +
Sbjct: 1   MTDPKAVKFIIQQGMRCL-----QGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQ 55

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            +  AI   +Q        N   A + + R +  +D G   A+     + ++       A
Sbjct: 56  RYEEAIASFDQA----GVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEA 111

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRL 317
                 SL+   + ++A    ++    NP+ + A     N+ T+L        LK   + 
Sbjct: 112 WNSRGTSLMILGRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAA--LKSFDKA 169

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             I+    E       + +++   D A A    A+++ P 
Sbjct: 170 LHISPNHPEIWYNQGCLLMQLQKRDDAIASFNKALELKPD 209



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 77/219 (35%)

Query: 168 GDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---- 221
           G   +A +   KAL ISP+ P  W  +  +   +  ++   AI   N+  +   +     
Sbjct: 157 GRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRD--DAIASFNKALELKPDHIGSW 214

Query: 222 -----------NRNRAILLIARSLE------------------NADKGDMIASYHDAIE- 251
                          A+L   ++LE                       D +ASY  A+E 
Sbjct: 215 INKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRLGRLQDAVASYDRALEC 274

Query: 252 ------------------------------SLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                                         +L++  + + A         +Q K   A  
Sbjct: 275 MPENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNAVYNKGYCYAAQGKVTLAVN 334

Query: 282 ILEKIWKVNPHPEIANIYTHL-LSENTVGKL---KRALR 316
            +E+  KVNP       Y  +  ++  + +L   KR  +
Sbjct: 335 YIEQAIKVNP-----QKYLPVAKTDPDLERLRKNKRFQK 368


>gi|146311840|ref|YP_001176914.1| tetratricopeptide repeat protein [Enterobacter sp. 638]
 gi|145318716|gb|ABP60863.1| Tetratricopeptide domain protein [Enterobacter sp. 638]
          Length = 389

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 37/189 (19%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +    ++     R  
Sbjct: 83  GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLVDETEFRVS 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + ++Q Y    +W +AI    +  
Sbjct: 143 AL----------------------------------QQLLQIYQSTSDWQKAIDTAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  K+  R   A      +L+     DM  +     +      NS   SI   +  +++ 
Sbjct: 169 KLGKDKQRVEIAHFYCELALQQMASDDMEKAMTLLKKGASADRNSARISIMMGRVFMAKG 228

Query: 275 KKRKAEVIL 283
           +  KA   L
Sbjct: 229 EFAKAVECL 237


>gi|332212282|ref|XP_003255248.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 2 isoform 1 [Nomascus leucogenys]
          Length = 472

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 37/220 (16%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +     + +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMHEEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLE--EINKESVESLVIVSKIALEMG 339
            +  P     H +I   Y             RA  L+   + +  +     + ++     
Sbjct: 274 LEYIPNNAYLHCQIGCCY-------------RAKVLQVMNLRENGMHGKRKLLEL----- 315

Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
            I  A A    A +       +  +LA +       E+A 
Sbjct: 316 -IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354


>gi|262305003|gb|ACY45094.1| acetylglucosaminyl-transferase [Libinia emarginata]
          Length = 289

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGYTEDATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYTEDATRLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q + A E     L++  T   ++ +L       G    A R   KAL++ P+
Sbjct: 27  ANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYTEDATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYDARMKKLVAIVGEQLERNRLPSVHPHH 236


>gi|66823629|ref|XP_645169.1| TPR repeat-containing protein [Dictyostelium discoideum AX4]
 gi|60473393|gb|EAL71339.1| TPR repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 1014

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 79/213 (37%), Gaps = 21/213 (9%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD+  A+     A   +P       A  +  VLA +   A   + Q  K           
Sbjct: 284 GDIKKARLLFKSATTSNPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVW-- 341

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                 +ENA+      +     +++++  +S+   + AA     Q K +K   +L +  
Sbjct: 342 ------IENANLQTPDNAKIVLAQAVRVIPHSVKIWLYAANLE-KQLKMKK--RVLRRAL 392

Query: 288 KVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           +  P   ++      L   E+    L RA    E   ++++  + ++     + + ++A 
Sbjct: 393 EFIPTSVKLWKEAVELEEPEDARILLGRA---VECVPDNIDLWLALA----NLETYEKAR 445

Query: 346 AKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDK 377
                A +  P    I++  AQ+E++   N + 
Sbjct: 446 EVLNKARQALPSSSEIWISAAQLEESQGKNDNV 478



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 163 ESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           E    G + +A       L I P   + W+  A +++             L+Q  + A +
Sbjct: 545 ECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEKQ------HGTKETLDQTLEKATQ 598

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                  L +  + E    GD+  +     ++ K    S    + A K     N+ R A 
Sbjct: 599 KCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVAAVKIESEMNELRAAR 658

Query: 281 VILEKI 286
            +L+K 
Sbjct: 659 NLLKKA 664


>gi|313200670|ref|YP_004039328.1| hypothetical protein MPQ_0923 [Methylovorus sp. MP688]
 gi|312439986|gb|ADQ84092.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
          Length = 467

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 14/178 (7%)

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W ++A+   Y+  ++W+ A   L Q  + A ++    A   +   LE    G   A+  
Sbjct: 20  AWFSQAL--AYMRIEQWAEAEKALRQALQLAPDY--AEAHCNLGYVLEQC--GHWDAAED 73

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN----IYTHL 302
               S +     + A++     L   ++  +AE I ++  + +   P +      +YT L
Sbjct: 74  AYRSSFQHAPALLNAALNLGVLLQRMSRFDEAESIYQQAMRHHSEQPALWTNLGILYTAL 133

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
             E+   +  R   L  +  +  ++   +S + L  G  ++       A  + P   I
Sbjct: 134 QREHEAERAHR-HAL-NMAPDYRKARFNLSYLLLRQGRFEEGWRCLE-ARTLTPHASI 188


>gi|161870730|ref|YP_001599903.1| tetratricopeptide repeat protein [Neisseria meningitidis 053442]
 gi|161596283|gb|ABX73943.1| periplasmic hypothetical protein [Neisseria meningitidis 053442]
          Length = 402

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 70  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 181

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +   +      A+E+ K C            
Sbjct: 182 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 241

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 292 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395


>gi|326479388|gb|EGE03398.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
          Length = 851

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G++++ +R   +A   +
Sbjct: 492 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 550

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230
           P+   +  A V+      +  +A   L+  ++ A                 NR+ A+ L+
Sbjct: 551 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 610

Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            + L+                   G +  +        + C  S+   + A++       
Sbjct: 611 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 670

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     L +A  L     +E   S ++ S+
Sbjct: 671 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 728

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +  +      K+     +F+ +A+I        +K + W + A+ A  D
Sbjct: 729 SIWHLESRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 786


>gi|325145134|gb|EGC67416.1| hypothetical protein NMBM01240013_0360 [Neisseria meningitidis
           M01-240013]
          Length = 389

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +   +      A+E+ K C            
Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 331 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|318042950|ref|ZP_07974906.1| hypothetical protein SCB01_14654 [Synechococcus sp. CB0101]
          Length = 526

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 64/186 (34%), Gaps = 15/186 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G  + A+ +A  ++    + P     +       + W  AI  L +  +    +   
Sbjct: 40  LALGQSSEAEHHARLSVQNDAELPEAFLNLGNALHAQERWDDAIQALQEAIRLRPLF--- 96

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A  L +       K  ++ +      S++   +   A    A +  +  +  +A     
Sbjct: 97  -APALSSLGNALRAKDQLLEAEEMFRRSMEAEPSYFQAYSNLAITQRALGQLDQALDTAL 155

Query: 285 KIWKVNP-----HPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           K  ++ P     H  +  I  H   E       L+R+L L     +  ES   ++ I L+
Sbjct: 156 KALELAPDHADVHSNLGVIC-HERGEWGEAEAALRRSLELA---PDHAESHFSLASILLQ 211

Query: 338 MGSIDQ 343
            G  +Q
Sbjct: 212 QGDYEQ 217



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 6/142 (4%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +      +        L  L       A+ Q   A E     ++   +   A  +L  
Sbjct: 82  AIQALQEAIRLRPLFAPALSSL--GNALRAKDQLLEAEEMFRRSMEAEPSYFQAYSNLAI 139

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
               +G L+ A   A KAL+++PD   V   +        EW  A   L +  + A +  
Sbjct: 140 TQRALGQLDQALDTALKALELAPDHADVHSNLGVICHERGEWGEAEAALRRSLELAPD-- 197

Query: 223 RNRAILLIARSLENADKGDMIA 244
              A    + +     +GD   
Sbjct: 198 --HAESHFSLASILLQQGDYEQ 217



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 80/222 (36%), Gaps = 15/222 (6%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G    A + +T+ALD+  D+           +   + S A    + +     +     A
Sbjct: 8   QGSYLEAIKASTRALDLQSDSAAAHANHSMILLALGQSSEAEH--HARLSVQNDAELPEA 65

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L +  +L   ++ D   +     E+++L      A      +L ++++  +AE +  + 
Sbjct: 66  FLNLGNALHAQERWD--DAIQALQEAIRLRPLFAPALSSLGNALRAKDQLLEAEEMFRRS 123

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     +  +A     L   +    L  AL+  E+  +  +    +  I  E G  
Sbjct: 124 MEAEPSYFQAYSNLAITQRALGQLDQA--LDTALKALELAPDHADVHSNLGVICHERGEW 181

Query: 342 DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWT 382
            +A A    ++++AP   E    LA I      + +    W 
Sbjct: 182 GEAEAALRRSLELAPDHAESHFSLASIL-LQQGDYE--QGWL 220


>gi|170571769|ref|XP_001891856.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Brugia malayi]
 gi|158603386|gb|EDP39326.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
           putative [Brugia malayi]
          Length = 1136

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 108/331 (32%), Gaps = 39/331 (11%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEV----------- 127
           GY  L   L++    ++  A  +++YVS      +       L  LL+            
Sbjct: 186 GYINLAAALVA--TGDLDQA--VNAYVSALQYNPDLYCVRSDLGNLLKAMGRLEDAKVPL 241

Query: 128 ----QIALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
               Q    +               ++       A  +L       G++  A  +  KA+
Sbjct: 242 YIDVQARFVQGIVNSTELLGCYLKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAV 301

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P+       +      A+ + RA+    +    A     N A++    +    ++G 
Sbjct: 302 QLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLAG----NHAVVHGNLACVYYEQGL 357

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IA 296
           +  +     +++ L  N   A    A +L  +    +AE    K  ++ P H +    +A
Sbjct: 358 IDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLA 417

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           NI           +L     L EI  E   +   ++ I  + G +  A      A++IAP
Sbjct: 418 NIKREQGKIEDATRLY-LKAL-EIYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAP 475

Query: 357 R-KEIFLLLAQIEQANSHNTDKILYWTQSAL 386
              + +  +    +    +    L     A+
Sbjct: 476 TFADAYSNMGNTLK-EMGDVGGALQCYTRAI 505



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 55/179 (30%), Gaps = 20/179 (11%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  E+       +A     KAL + P        +        +   A     +  +  
Sbjct: 390 GLVSEA------EAAYN---KALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIY 440

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E+    A      +     +G +  + +   E++++      A      +L        
Sbjct: 441 PEF----AAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGG 496

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           A     +  ++NP     H  +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 497 ALQCYTRAIQINPGFADAHSNLASI--HKDSGNVPEAIQSYSTALKLKPDFPDAFCNLA 553



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     KA+D+ P+ P     +  
Sbjct: 325 DRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLAN 384

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                   S A    N+  +       ++  L    +    ++G +  +    +++L++ 
Sbjct: 385 ALKEKGLVSEAEAAYNKALQLCPTHADSQNNL----ANIKREQGKIEDATRLYLKALEIY 440

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K + A    ++  ++ P    A+ Y+++ +      +  G L
Sbjct: 441 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT--FADAYSNMGNTLKEMGDVGGAL 498

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G++ +A      A+K+ P 
Sbjct: 499 QCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQSYSTALKLKPD 544



 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   Q    H +    L    I   + +   A       L+I      A 
Sbjct: 390 GLVSEAEAAYNKALQLCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 447

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I+P        +        +   A+    +  + 
Sbjct: 448 SNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGGALQCYTRAIQI 507

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 508 NPGF----ADAHSNLASIHKDSGNVPEAIQSYSTALKLKPDFPDAFCNLAHCL 556



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +   + A       LQ+  T   +  +L       G +  A R   KAL+I P+
Sbjct: 383 ANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPE 442

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   AI    +  + A  +    A           + GD+  + 
Sbjct: 443 FAAAHSNLASILQQQGKLQDAINHYKEAIRIAPTF----ADAYSNMGNTLKEMGDVGGAL 498

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + + +L    
Sbjct: 499 QCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQSYSTALKLK--PDFPDAFCNLAHCL 556

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 557 QIICDWNDYDNRMKKLIAIVDDQLQKKRLPSVHPHH 592


>gi|149062743|gb|EDM13166.1| rCG47217 [Rattus norvegicus]
          Length = 412

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 12/120 (10%)

Query: 177 ATKALDISPDAPWVTE--AVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRAILLIA 231
             KAL+  P  P  T   A+    +   +W   +  I  L Q    + +    + +L + 
Sbjct: 109 FEKALEKDPKNPESTSGWAIANYRLD--DWPASNDYIDSLEQAISLSPDNTYVKVLLAM- 165

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 ++     +     E+LK   ++I   + AAK  +  +   +A  +L+K  +  P
Sbjct: 166 ----KLEEVHENRAKELVEEALKKDPSAIDTMLGAAKFYVKVHDTDRAIQLLKKALESMP 221


>gi|71906424|ref|YP_284011.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71846045|gb|AAZ45541.1| TPR repeat [Dechloromonas aromatica RCB]
          Length = 796

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 86/279 (30%), Gaps = 13/279 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L E +   AE +Y  +   L+ ++        A   L   +  I DL +A+ +  +A+ 
Sbjct: 10  RLQEGRRLFAEGRYGESAAVLQALVGDAPGNAAAWLELGRLALTIPDLPAARDFLNEAVA 69

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             P        + +       W  A  +L +    A +      +L    +      G++
Sbjct: 70  HDPGNIGALSLLGEVLRRDGAWLEAQAYLQRALAVAPD----DLLLACRLANCYVGSGEL 125

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIAN 297
             +       L    +     +     L       +AE  L     + P+       + +
Sbjct: 126 FKANELLSGLLARYPSVGELYLLRGLVLYQLRHDAQAEADLHLCLGLAPNSAQALAALGD 185

Query: 298 IYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           IY      E     + RA +L     + +      + ++L +    +A       ++ AP
Sbjct: 186 IYRDRELYEEAADFVDRAYQLA---PDDIHVARARAYLSLALRDWGKAADILAEVLQQAP 242

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395
              +  +        S N    +   + AL       W+
Sbjct: 243 SDVVAAVNRVAALIESGNALAAIDALEDALRVGASEPWV 281



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 6/138 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+  +A      AL +    PWV E +   +    +W  A+  L             
Sbjct: 256 IESGNALAAIDALEDALRVGASEPWVHEMLGAMFAQRGDWKIAVENLEASVAREPTSTTG 315

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             IL++A S      G+M  +   A + L++  + + A I      I      +   + +
Sbjct: 316 WNILIVAYSKL----GEMEKAEAAAKKILEIDPHHVNALINLGGLKIDLGFHDEGIQLFQ 371

Query: 285 KIWKVNPHPEIANIYTHL 302
           +   +   PE    Y+ L
Sbjct: 372 RA--LAQAPESPAAYSGL 387


>gi|332141359|ref|YP_004427097.1| Response regulator with TPR repeat [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551381|gb|AEA98099.1| Response regulator with TPR repeat [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 546

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 16/141 (11%)

Query: 128 QIALA--ERQYNIAHEKLEMMLQIPATREFAVYS----LYFESC-RIGDLNSAQRYATKA 180
           Q      + + N A + +E +L  P+            L  E   RIG    A    +  
Sbjct: 135 QAYSLIEQGECNSAIDHIESLLDSPSH----YKGHCEQLLVELYWRIGQPEKALDVLSDY 190

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +D  P   W   A+ + Y+   E+ +AIT   +  K  +      A  ++A++ +  D G
Sbjct: 191 IDGKPVL-WAQIAIAKTYLQLNEFDKAITTAKRTLKRNRF--NADAYDILAQAQQKLDDG 247

Query: 241 DMIASYHDAIESLKLCDNSIM 261
           +   +     E++KL   S+ 
Sbjct: 248 E--KALDAIKEAIKLSPYSLP 266


>gi|260825694|ref|XP_002607801.1| hypothetical protein BRAFLDRAFT_199459 [Branchiostoma floridae]
 gi|229293150|gb|EEN63811.1| hypothetical protein BRAFLDRAFT_199459 [Branchiostoma floridae]
          Length = 827

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 79/214 (36%), Gaps = 22/214 (10%)

Query: 163 ESCRIGDLNS-AQRYATKALDISP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQ- 213
            +    D ++ A  Y  +A  + P       +     + + +     + + +A+  +   
Sbjct: 455 HALENQDRHAEALEYFLRAAGVQPDDIGAHMNVGRAYKNLERFQDSEEAYRKAMALMPSV 514

Query: 214 ---KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              KK   +    + ++ +   +L   D   ++ +     +++ +  +   A I   + L
Sbjct: 515 IPGKKYATRVAPSHLSVYVNLANLIREDDTRLMEADSLYRQAISMRPDFTQAYINRGEVL 574

Query: 271 ISQNKKRKAEVILEKIWKV---NP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           +  N+ ++A+   E   ++   NP  H  +  +   L        LK   +  +++    
Sbjct: 575 MRLNRSKEAQQSYETALQLDSDNPDIHYNLGIVL--LEQGERSQALKCLTKALQLDPHHK 632

Query: 326 ESLV---IVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +SL    ++ + + +     +A+ +    ++  P
Sbjct: 633 QSLFNSAVMMQESGDPALRPEAYRRLYEVLEQEP 666


>gi|186477739|ref|YP_001859209.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184194198|gb|ACC72163.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum
           STM815]
          Length = 789

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 61/202 (30%), Gaps = 17/202 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD N+A      A+++ P        +        +   A+    +      ++   
Sbjct: 116 REAGDANAAMMSCATAIELRPGYAEAYNNLGNALKDLGDLGNAVLAYQKAVSFRPDY--- 172

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A      +   A +GD  AS      +L L  +   +    AK L ++ +   A   L+
Sbjct: 173 -ADAFGNLARAEAGRGDADASIAAFRRALALDPDRADSYDSLAKLLHARGEIDAAIDTLQ 231

Query: 285 KIWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +  + +P     H  +A         +     L  A+ L           V +       
Sbjct: 232 QATRRDPADAARHRLLAQWLLGRQRWDEAAHALTSAVELA---PNDAAGYVELGDAYQHA 288

Query: 339 GSIDQA----HAKAMLAMKIAP 356
             +D A         LA + AP
Sbjct: 289 DKLDAAILCYRTATELAPRDAP 310



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 88/296 (29%), Gaps = 33/296 (11%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A +   A    +   +    + E    L              A    +  +        A
Sbjct: 118 AGDANAAMMSCATAIELRPGYAEAYNNL--GNALKDLGDLGNAVLAYQKAVSFRPDYADA 175

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-K 215
             +L       GD +++     +AL + PD     +++ +      E   AI  L Q  +
Sbjct: 176 FGNLARAEAGRGDADASIAAFRRALALDPDRADSYDSLAKLLHARGEIDAAIDTLQQATR 235

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           ++  +  R+R  LL    L      +   +   A+E   L  N     +    +    +K
Sbjct: 236 RDPADAARHR--LLAQWLLGRQRWDEAAHALTSAVE---LAPNDAAGYVELGDAYQHADK 290

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              A +      ++ P     H  +A         +    L+ A +   +   S    V 
Sbjct: 291 LDAAILCYRTATELAPRDAPAHHRLAVALLKQRRADEA--LESAQKAVSLEPHSAVPHVN 348

Query: 331 V---------SKIALEM--------GSIDQAHAKAM-LAMKIAPRKEIFLLLAQIE 368
           +         +  A+          G ++ AH + +      AP      L+A  E
Sbjct: 349 LGDVLSVLGDADGAIASYRRGIALDGEMELAHNRLLFDLATHAPTPPAVTLVAARE 404


>gi|330502031|ref|YP_004378900.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
 gi|328916317|gb|AEB57148.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
          Length = 569

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 93/278 (33%), Gaps = 43/278 (15%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           +F  E L  LL  ++A    +++IA        QI      A  + +  +  +G   +A 
Sbjct: 41  SFSQESLFALLTAELAGQRNRFDIALGNYVQQAQITGDAGVAERA-FRIAEYLGAEQAAL 99

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-------------- 220
             A      +P       A   Q   A  +  ++T++ Q  +   +              
Sbjct: 100 DSALIWASNAPGNIDAQRAAAVQLARAGRYDESMTYMEQVLQRQGDTHFDFLALSAAETD 159

Query: 221 ----------------WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
                            N + + LL  +++     G    +    +E      + +   +
Sbjct: 160 PDTRAGLLQGFDRLLSKNPDNSQLLFGKAILLQQDGRAEEALEL-LEDSPASADQVSPIL 218

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRAL----RL 317
             A+ L S  +  +A  +L+K  + N  P+   +   Y  LL E    +L  A     +L
Sbjct: 219 LRARLLQSLGRGDEALPLLQKGIRKN--PDDKRLRLTYARLLVE--QDRLDDAKGEFSKL 274

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            + N    +    ++ + LE  + ++A       ++  
Sbjct: 275 VQENPNDDDLRFSLALVCLEAEAWEEAIVYLEELVERR 312


>gi|256376883|ref|YP_003100543.1| hypothetical protein Amir_2764 [Actinosynnema mirum DSM 43827]
 gi|255921186|gb|ACU36697.1| TPR repeat-containing protein [Actinosynnema mirum DSM 43827]
          Length = 683

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 4/146 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  E +L +        Y+L      +GD   A    TK L++ P       +
Sbjct: 482 GRDEEALEAFERVLPLSPPFPEVHYNLGDTRLALGDAEGALAEFTKVLELDPAHQEARLS 541

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +      + + A+  +      + +    R +   A +    D G    +        
Sbjct: 542 RAELRCDLGDHAGALADVEAGLALSPDNPMLRCVQATALA----DAGAPDQARTLIESLT 597

Query: 254 KLCDNSIMASICAAKSLISQNKKRKA 279
                   A    A+      +  +A
Sbjct: 598 TTHPTCAQAWAIRARLEYESGELPQA 623



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAK------EWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           V     + A+  L +            E   +R++L   R+  NA  G +  +  D    
Sbjct: 401 VRQGRPAEALRLLEEGMARLDADLAPGEHPLHRSVLRYNRAQVNAMTGKVEEALADYQAV 460

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307
             L  +        A  L    +  +A    E++  ++P     H  + +    L   + 
Sbjct: 461 AALDPDFPEHHFHVASMLRKLGRDEEALEAFERVLPLSPPFPEVHYNLGDT--RLALGDA 518

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            G L    ++ E++    E+ +  +++  ++G    A A     + ++P   +   +   
Sbjct: 519 EGALAEFTKVLELDPAHQEARLSRAELRCDLGDHAGALADVEAGLALSPDNPMLRCVQAT 578

Query: 368 EQANSHNTDKIL 379
             A++   D+  
Sbjct: 579 ALADAGAPDQAR 590



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 77/268 (28%), Gaps = 15/268 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
              +AR        +H  H   L      Q+     +   A    + +  +        +
Sbjct: 414 EEGMARLDADLAPGEHPLHRSVL-RYNRAQVNAMTGKVEEALADYQAVAALDPDFPEHHF 472

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +     ++G    A     + L +SP  P V   +    +   +   A+    +  +  
Sbjct: 473 HVASMLRKLGRDEEALEAFERVLPLSPPFPEVHYNLGDTRLALGDAEGALAEFTKVLELD 532

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                 R    ++R+    D GD   +  D    L L  ++ M     A +L       +
Sbjct: 533 PAHQEAR----LSRAELRCDLGDHAGALADVEAGLALSPDNPMLRCVQATALADAGAPDQ 588

Query: 279 AEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A  ++E       HP  A  +         S      L        +  ++ E     + 
Sbjct: 589 ARTLIES--LTTTHPTCAQAWAIRARLEYESGELPQALADFDESVRLL-DAPEVRYNRAL 645

Query: 334 IALEMGSIDQAHA--KAMLAMKIAPRKE 359
           +  E G   +A    + +LA        
Sbjct: 646 VLEETGDYTRAAQDYREVLARTEDEDAR 673


>gi|40063714|gb|AAR38495.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 697

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             IG+L+ A +   KAL I PD   V   + +    L  +   A+    +      ++  
Sbjct: 52  KTIGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQDL-GQLDAAVKSYEKAIAIKPDY-- 108

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A       +   + G +  +     +++ +  + + A      +L    +   A    
Sbjct: 109 --ANACNNLGVTLQELGQLDTAVKSYEQAIAIKPDFVEAYYNLGVTLQELGQLDAAVECY 166

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +K   + P     H  + N    L   +    +K   +   I  E   +      +   +
Sbjct: 167 KKALAIKPDYAEAHYNLGNALKDLGQLDAA--VKSYEQALAIKPEYANAYFNRGHVLKNL 224

Query: 339 GSIDQAHAKAMLAMKIAPR 357
             +D+A      A+ I P 
Sbjct: 225 KRLDEALVSYESAIAIKPD 243


>gi|116621058|ref|YP_823214.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224220|gb|ABJ82929.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 670

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 76/266 (28%), Gaps = 43/266 (16%)

Query: 167 IGDLNSAQRYATKAL---DISPDAPWVT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            GDL +A+  A       +++P  P    + +       ++ +     + + ++  +   
Sbjct: 395 SGDLLAARAEAADPGYRGEVAPYYPDAGVDGLYLAVAQVRDGANLDGGIPRLREAIERLK 454

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +    +  +   +  GD   +     E+L++      A      +LI      +A   
Sbjct: 455 PRQPEFYLELAKAYSKTGDSGQAVRWCEEALRVRPGFNPAIRELGATLIQAGDFSRAAET 514

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKR----------------------------A 314
           L +    +    + N Y  L   +      R                             
Sbjct: 515 LRQARGPSAQTNLGNAYLRLGRIDLAESALRTQSEDPDANNLLGVAESARNNYGSAEQFF 574

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEI-----FLLLA--Q 366
            +  E+  +  E+   ++ +        +A      A+   P   E       LLLA   
Sbjct: 575 RKAIELQTDHAEAHHNLANLLASRRDYAEAAYHFRQAIAANPGYAEAHHRFGLLLLATGA 634

Query: 367 IEQANSHNTDKILYWTQSAL-HAMPD 391
           I+ A       +      AL  A  D
Sbjct: 635 IDHAQREIEAAVR--LDPALAEARRD 658



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 21/219 (9%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     + GD   A R+  +AL + P        +    + A ++SRA   L Q +  + 
Sbjct: 464 LAKAYSKTGDSGQAVRWCEEALRVRPGFNPAIRELGATLIQAGDFSRAAETLRQARGPSA 523

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           + N   A L + R          I     A+ +     +   A+     +  ++N    A
Sbjct: 524 QTNLGNAYLRLGR----------IDLAESALRTQSEDPD---ANNLLGVAESARNNYGSA 570

Query: 280 EVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           E    K  +        H  +AN+       +         +    N    E+      +
Sbjct: 571 EQFFRKAIELQTDHAEAHHNLANLLASRR--DYAEAAYHFRQAIAANPGYAEAHHRFGLL 628

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANS 372
            L  G+ID A  +   A+++ P   E    LA I  A  
Sbjct: 629 LLATGAIDHAQREIEAAVRLDPALAEARRDLADIIAAKG 667



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 23/184 (12%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-EF 155
           A +   A +                  L      L   + ++A   L    + P      
Sbjct: 505 AGDFSRAAETLRQARGPS-----AQTNL--GNAYLRLGRIDLAESALRTQSEDPDANNLL 557

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            V           +  SA+++  KA+++  D       +       ++++ A     Q  
Sbjct: 558 GV-----AESARNNYGSAEQFFRKAIELQTDHAEAHHNLANLLASRRDYAEAAYHFRQAI 612

Query: 216 KNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  E +    +LL+A        G +  +  +   +++L      A    A  + +
Sbjct: 613 AANPGYAEAHHRFGLLLLA-------TGAIDHAQREIEAAVRLDPALAEARRDLADIIAA 665

Query: 273 QNKK 276
           + ++
Sbjct: 666 KGRR 669


>gi|300311388|ref|YP_003775480.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
 gi|300074173|gb|ADJ63572.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
          Length = 658

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 99/291 (34%), Gaps = 48/291 (16%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             GL+++       A        +    + EY+  L      L++ + + A    E  ++
Sbjct: 63  ARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNL--AGTVLSQDRIDEAIALYEHAIR 120

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           I      +   L        D  ++  Y   A+   P+AP                   +
Sbjct: 121 IDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAP-----------------GPL 163

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA---------DKGDMIASYHDAIESLK----L 255
           + L +     K +N   A++L +  L+ +         +    +  Y +AIES K    L
Sbjct: 164 SHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILL 223

Query: 256 CDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSE--NTVG 309
                 A    A S +  N+  +A      ++E        P+  N Y  L S   +T  
Sbjct: 224 DPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIA------PKDPNAYVKLGSSYFSTSD 277

Query: 310 K----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +    ++   +  E++ +   +   +  I  + G ++ A      A+++ P
Sbjct: 278 RFDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRP 328



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 55/152 (36%), Gaps = 7/152 (4%)

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           + K       +  + +L + ++L+  D      +    +  L      + A+       +
Sbjct: 10  HGKPATPPPKHPLQDLLDVRKALDLLDSRKTDEAKALCMAVLSRNPTLVFANHARGLVAM 69

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-TVGKLKRALRLE----EINKESVE 326
            + K   AE  L K  + +  PE A   ++L     +  ++  A+ L      I+++   
Sbjct: 70  HEGKFADAEAYLRKAIEAD--PENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRA 127

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           S + ++    E    + + A    A+K  P  
Sbjct: 128 SRIGLANALHEKNDPEASVAYFEDAVKREPNA 159


>gi|182412312|ref|YP_001817378.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177839526|gb|ACB73778.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
          Length = 485

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 85/307 (27%), Gaps = 26/307 (8%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF- 162
           +    Y   +    ++    L   +I     ++  A EKLE ++    T     Y L   
Sbjct: 155 KAAAEYAEVRKIRPDDRYALLGLARIDYDASRWEQAREKLEALVA--QTNFELGYDLIVS 212

Query: 163 --ESCRIGDLNSAQRYATKALDIS--PDAPWVTEAVVQQY------------VLAKEWSR 206
             E     +   + R A KA      P  PWV E + + Y              +    +
Sbjct: 213 VYEKLGQHERAESIRGAAKAFGTYRDPPDPWVDELMAECYDPYRLSLTAGVLARSGGQDK 272

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+  L +  + A     +R          + + G+  A         +L           
Sbjct: 273 ALQLLERAVELAPADISSR----FQLGNLHVEMGNFSAGREALETCTRLAPEFSDGWARL 328

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKE 323
           +       +   AE  L    +  P  P +  +       +  T   +   +    +   
Sbjct: 329 SALQAQLGEMSAAERTLATGLQNCPQSPALHLMRARNLRQAGRTDEAINEYMISIRLRPN 388

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
             E  + +    +  G  ++   +   A+   P   + L +         +  +   W  
Sbjct: 389 EPEPYMELGNTLIAAGREEEGVEQIRAALVAEPADPMALSVLAFRAIQLRDEAEAQQWMT 448

Query: 384 SALHAMP 390
              +   
Sbjct: 449 RVENQPR 455



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 45/155 (29%), Gaps = 34/155 (21%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G++  +         L  + I A +  A   +  ++  KA                A  Y
Sbjct: 117 GEVDRALTLWRRVEALAPDYIPARLRIADCELKADRPTKA----------------AAEY 160

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +                +I  +   +L+ +++I  +    +QA  K    +     + 
Sbjct: 161 AEVR---------------KIRPDDRYALLGLARIDYDASRWEQAREKLEALVAQTNFEL 205

Query: 360 IFLLLAQIEQ--ANSHNTDKILYWTQSALHAMPDP 392
            + L+  + +        + I      A     DP
Sbjct: 206 GYDLIVSVYEKLGQHERAESIRG-AAKAFGTYRDP 239


>gi|320109109|ref|YP_004184699.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319927630|gb|ADV84705.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
           saanensis SP1PR4]
          Length = 620

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 72/207 (34%), Gaps = 11/207 (5%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            ++      +  L+         Y+L F     GDL+ A     +A  + P       ++
Sbjct: 415 DWDSPVSLYQSSLEATPRSSVLWYNLGFSLRERGDLDKAIESYREAARLRPKYQRAFASI 474

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            + YV     + AI       +       +    ++  ++     G    +      +++
Sbjct: 475 GEIYVQQDRPAAAIKEYEHALQ----LQSSDTKTVVNYAVALEAVGKNQLAEEQFKRAIR 530

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVG 309
              N   A I      + ++++ +A    +K    NP  P    ++  ++     ++   
Sbjct: 531 QLPNQSAAYIDLGNLYVQEDREDEAIQCFQKAIDNNPDDPLSYFDMGVLFQRKGQDDLA- 589

Query: 310 KLKRALRLEEINKESVESLVIVSKIAL 336
            L    ++  +  +  E+L+ +S++ +
Sbjct: 590 -LPFYKKVLRLKPDDPETLLYMSQLHV 615



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 29/98 (29%), Gaps = 4/98 (4%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W    V +      +W   ++          E     ++L         ++GD+  +   
Sbjct: 401 WTAWGVWRVRARVADWDSPVSLYQSSL----EATPRSSVLWYNLGFSLRERGDLDKAIES 456

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             E+ +L      A     +  + Q++   A    E  
Sbjct: 457 YREAARLRPKYQRAFASIGEIYVQQDRPAAAIKEYEHA 494


>gi|218549026|ref|YP_002382817.1| hypothetical protein EFER_1674 [Escherichia fergusonii ATCC 35469]
 gi|218356567|emb|CAQ89190.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
 gi|324113153|gb|EGC07128.1| hypothetical protein ERIG_01571 [Escherichia fergusonii B253]
 gi|325497446|gb|EGC95305.1| tetratricopeptide repeat protein [Escherichia fergusonii ECD227]
          Length = 389

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 92/282 (32%), Gaps = 57/282 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL VQ      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       R+G                       + ++Q Y    +W +AI    +
Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSDWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  KE +R   A      +L+     D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKEKHRIEIAHFYCELALQLMASDDLDRAMALLKKGAAADKNSARVSIMMGRIFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKE 323
           + +  KA   L+++  +    E+ +    +          ++     L+RA    E N  
Sbjct: 227 KGEFAKAVESLQRV--IAQDKELVSETLEMLQTCYQQLGKNDEWEEFLRRA---VEENTG 281

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
           +  + ++++ I       D A       ++  P   +F  L+
Sbjct: 282 AA-AELMLADILETREGRDTAQVYITRQLQRHPTMRVFHKLM 322


>gi|119472559|ref|ZP_01614607.1| hypothetical protein ATW7_06193 [Alteromonadales bacterium TW-7]
 gi|119444883|gb|EAW26183.1| hypothetical protein ATW7_06193 [Alteromonadales bacterium TW-7]
          Length = 545

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 78/227 (34%), Gaps = 42/227 (18%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ------------------------IALAER 134
           +  L RK ++Y         + L+ L   Q                          +A  
Sbjct: 155 DAALERKDNNYSPILLRLKGDALLRLKRAQEAKDFFKSVLDIQKFAWAKVGLVEALIANN 214

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           ++ +A   L+ ML+   TR  A+  L     ++     AQ + ++A  I+P      +++
Sbjct: 215 EHILAQRMLKTMLERQETRLVALDLLGRLEIKLNQFELAQDFLSQAATIAPRNISRQKSL 274

Query: 195 VQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENAD--KGDMIASYHD 248
               ++  ++ +   +L QK          ++     L  AR+  +              
Sbjct: 275 STVSLINHDYEK--NYLTQKDIANFAKHSIYDHPDIYLNAARAGIDFALTTDQTDQVQRI 332

Query: 249 AIESLKLCDNS---IM-------ASICAAKSLISQNKKRKAEVILEK 285
           + ++ K  ++               +  A+    +++ +KA+ ++E+
Sbjct: 333 SRQTNKYINDLKTQFPNSTNQSQIDVLNARLHYLKDEHQKAKKLIEQ 379


>gi|94970143|ref|YP_592191.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94552193|gb|ABF42117.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 878

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 95/300 (31%), Gaps = 36/300 (12%)

Query: 99  NIPLARKMHS-YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           +  LA   H+  ++ +    +  L +L   Q AL   Q+++A ++ +  L I      AV
Sbjct: 558 DQALANLQHAMQLNDRVAAPHVSLAWL---QSAL--GQHDLALQEYQKALAINPRDPEAV 612

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  E  R G    A+    +A+ + PD      A+   YV  + +  AI    +    
Sbjct: 613 KGLSREYERAGRTADAEAGFKQAILLRPDYWDSYNALGSFYVRQQRYPEAIAQFRRVLDL 672

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA---KSLISQN 274
             +     +      +      GD  AS  +A  +L+   +   +    A   +  +SQ 
Sbjct: 673 TPD----NSAAYSNVAGVLLLIGDP-ASQKEAETALRRSLDLSPSYAAYANLGRLYMSQK 727

Query: 275 KKRKAEVILEKI----------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-- 322
           +  +   I  K           W          +    + ++      RA     +    
Sbjct: 728 RYAEGVDITRKALSMNDQNYEVWAN------LTVMLQWMHDDVGAADSRAHTFALLKPYV 781

Query: 323 -ESVESLVIVSKIALE---MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
               E     S +A      G    A  +   A+ + P     L  A     +  +  + 
Sbjct: 782 VAHPEDANAHSSLATHYAKAGDRTNAMREIDAALGLQPHDSTVLADAAEVYEDFGDRKRA 841


>gi|94967941|ref|YP_589989.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549991|gb|ABF39915.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 748

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 72/275 (26%), Gaps = 43/275 (15%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q          A  +    + +   R              G+  SA     KA+   P
Sbjct: 50  SAQTFQIASDLTRAAAEYRKGISVALER-VG-----NLKVAKGEFTSALDLLRKAVATDP 103

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR---------------AILLI 230
           +       +   Y  A  +  A T L    K+     R R               A   +
Sbjct: 104 ENTDGQIDLSIAYFRAGNYEGARTVLLPLVKSDPGSARGRNLMGKILFMQGDFEGASTEL 163

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMAS--------------ICAAKSLISQNKK 276
             +L      D+  S   A   LK                       +   ++       
Sbjct: 164 QAALSITPDFDVAYSLALAYLQLKKLPQVTPLVDEMKASMAKSPELYMLLGQAYRQTGYY 223

Query: 277 RKAEVILEKIW---KVNP--HPEIANIYTHLLSENTVGKLKRALRLEEI--NKESVESLV 329
            +A    +         P  H  +   Y  L  +     L RA   +E+  N +   S  
Sbjct: 224 DQAVSEFKTALALDAARPRLHNLLGTTYVALGGKQNYE-LARAEFQQELAKNPKDYSSHY 282

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            +  I LE G   +A A    A  +AP     +LL
Sbjct: 283 YLGLIELEDGQYAKAEAALKTAHALAPDDPAAMLL 317



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 20/206 (9%)

Query: 123 YLLEVQIALA-ERQ----YNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRY 176
            LL   +A            +     E+    P         +  ++     D + A   
Sbjct: 542 LLLSAGVAFVKSGDIPTGQRLFTRAFEVGKATPEIHL-----IIGQAYAEQSDNDEALAE 596

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +AL+++P  P     +        E+  A     Q+     E N      +   +   
Sbjct: 597 FKQALELNPKLPDAHFYIGMVRFKRGEFDDAAKEFQQEL----EVNPQSVQAMYQLAYIR 652

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--- 293
             +     +     E +K   N+  A     K+L+ Q     A   LE   K++P     
Sbjct: 653 MQQHQAPEASSLLSEVIKQQPNNSDAHYQLGKALLEQGDAGGATRELETSVKLHPTDYAY 712

Query: 294 -EIANIYTHLLSE-NTVGKLKRALRL 317
            ++++ Y     E ++   L+   +L
Sbjct: 713 FQLSHAYARTGREADSKQALEEFEKL 738



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 82/277 (29%), Gaps = 56/277 (20%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY- 158
              A +  +Y           L  LL+   + +  + ++       M          +  
Sbjct: 479 GLAAFRAQAYADAI-----PPLERLLKKSPSDSNLRESLGLSYY--MTDKFKESAATLRP 531

Query: 159 ---------SLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
                     L   +     + GD+ + QR  T+A ++    P +   + Q Y    +  
Sbjct: 532 IVDTMSNNPGLLLSAGVAFVKSGDIPTGQRLFTRAFEVGKATPEIHLIIGQAYAEQSDND 591

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+    Q      E N           +    +G+   +  +  + L++   S+ A   
Sbjct: 592 EALAEFKQAL----ELNPKLPDAHFYIGMVRFKRGEFDDAAKEFQQELEVNPQSVQAMYQ 647

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            A   + Q++  +A  +L ++ K  P                                + 
Sbjct: 648 LAYIRMQQHQAPEASSLLSEVIKQQP-------------------------------NNS 676

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           ++   + K  LE G    A  +   ++K+ P    + 
Sbjct: 677 DAHYQLGKALLEQGDAGGATRELETSVKLHPTDYAYF 713



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 15/146 (10%)

Query: 146 MLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDI---SPDAPWVTEAVVQQYVLA 201
           M + P      +Y L  ++ R  G  + A      AL +    P    +           
Sbjct: 203 MAKSPE-----LYMLLGQAYRQTGYYDQAVSEFKTALALDAARPRLHNLLGTTYVALGGK 257

Query: 202 KEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           + +  A     Q+  KN K+++ +         L   + G    +      +  L  +  
Sbjct: 258 QNYELARAEFQQELAKNPKDYSSHY-----YLGLIELEDGQYAKAEAALKTAHALAPDDP 312

Query: 261 MASICAAKSLISQNKKRKAEVILEKI 286
            A +   +    Q     A  +L ++
Sbjct: 313 AAMLLLGRLYDQQKNWNAAIEVLRQV 338



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 12/160 (7%)

Query: 118 NEYLVYLLEVQIALAERQ--YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
              L  LL         +  Y +A  + +  L        + Y L       G    A+ 
Sbjct: 240 RPRLHNLLGTTYVALGGKQNYELARAEFQQELAKNPKDYSSHYYLGLIELEDGQYAKAEA 299

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------WNRNRAI 227
               A  ++PD P     + + Y   K W+ AI  L Q    +             +  +
Sbjct: 300 ALKTAHALAPDDPAAMLLLGRLYDQQKNWNAAIEVLRQVLARSSAQGASPVQLATTHEML 359

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSI--MASIC 265
                      + +   +  +A++S     ++    A   
Sbjct: 360 SKAYAGAGQIPESEKELAAANALKSQDASKSATSDPAVAI 399


>gi|187923650|ref|YP_001895292.1| hypothetical protein Bphyt_1658 [Burkholderia phytofirmans PsJN]
 gi|187714844|gb|ACD16068.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phytofirmans
           PsJN]
          Length = 284

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 24/193 (12%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           LL         Q   A      +L+ P ATR      L   +   GD   A +   +A+ 
Sbjct: 99  LLRADALRMTDQPGAAANAYGQLLKTPLATR--GYRGLGLIAGAAGDFARAAQELQQAVQ 156

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P        +    +   +   A   L +      E ++    ++   +L     G+ 
Sbjct: 157 LAPTDATTLSDLGYARLRDGDVDGARVPLMKA----AELDQTNPKIISNVALYLLANGNQ 212

Query: 243 IASYHDAIESLKLCDNSIMASICA---------------AKSLISQNKKRKAEVILEKIW 287
             +    +   KL  + + A+IC+               A +             +    
Sbjct: 213 AQAL-AIMNQQKLAPD-VRAAICSDAAKVAAAGRAQTRGAPAQQESGALGTGARTVASAQ 270

Query: 288 KVNPHPEIANIYT 300
            + P P +   + 
Sbjct: 271 GIEPAPRLLQRFA 283


>gi|262304957|gb|ACY45071.1| acetylglucosaminyl-transferase [Argulus sp. Arg2]
          Length = 288

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVNEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYTEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +        +   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDVQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 13/200 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G +N A+     AL + P        +            A     +  +   
Sbjct: 26  LANALKEKGQVNEAEDCYNTALRLCPSHADSLNNLANIKREQGYTEEATRLYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E+    A      +     +G +  +     E++++      A      +L      + A
Sbjct: 86  EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDVQGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
                +  ++NP     H  +A+I  H  S N    ++      ++  +  ++   ++  
Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHC 199

Query: 335 ALEMGSID--QAHAKAMLAM 352
              +      +A  K ++A+
Sbjct: 200 LQIVADWTDYEARMKKLVAI 219


>gi|168010329|ref|XP_001757857.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691133|gb|EDQ77497.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1673

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 29/190 (15%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                    A    +  + +      A  +L     + G +        +A   SP A W
Sbjct: 588 YQIAGDMRRAARSYQKAINLDPEDLEAGEALCNLLEKGGQIVLEGAICREASQHSPRAYW 647

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKG-------- 240
               +    V AK+WS A++ L    +  + +     A+ L  + L              
Sbjct: 648 AWRRLGYIQVQAKQWSEAVSNLQHALRGYSSDGCLWEALGLAYQQLGMLTAALKAYERVV 707

Query: 241 ------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ--NKKRKAE 280
                               +ASY  AI+  +   + +  ++ A   L +    + R+  
Sbjct: 708 SLGNTSPIFALLQSGIILQSLASYTQAIDIFRNALDKVPGNVVAQCGLAAALLGRARQCT 767

Query: 281 VILEKIWKVN 290
            +    W   
Sbjct: 768 SVGALAWAAR 777


>gi|88861267|ref|ZP_01135899.1| putative HemY (Uncharacterized enzyme of heme biosynthesis)
           [Pseudoalteromonas tunicata D2]
 gi|88816748|gb|EAR26571.1| putative HemY (Uncharacterized enzyme of heme biosynthesis)
           [Pseudoalteromonas tunicata D2]
          Length = 373

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 110/367 (29%), Gaps = 28/367 (7%)

Query: 20  IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79
            V      V I + N     S      +         LLF +  +  +        + +R
Sbjct: 20  WVIGEKGYVLIAFNNWTIEGSIVSFAVMTIIASIGLYLLFKLVWYVWAIYGNTRFRISQR 79

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
              K    L  GL S   ++  L  K     +       + + Y      AL   Q   A
Sbjct: 80  TEQKQLANLQDGLWSALNNDHSLVLK--KLANANLPVSWQGISYAFAADAALKSNQSAKA 137

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
              LE++ ++P  ++  V  LY  +       +A   +  A    PD        +  Y 
Sbjct: 138 ---LELLAKVPDEQQNYVAHLY--AQTGEHQLAADLLSVAAQQKKPDVLQ-----LHLYC 187

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL------ 253
                      L  ++ +         +       +   +G     +  A  ++      
Sbjct: 188 ---------QLLVAQQDDTALLEVIPKLAKFGDLTDEQWQGVWQVVFKHADNAVIEQRYE 238

Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           +L  N    +  A  ++L++     KAE IL K+ K   +  +     +    + +   K
Sbjct: 239 QLARNLKPLAEVAYCRALLNNGVTEKAEAILIKLLKKGHYDTVTASLKNSSRLSLLSLQK 298

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
               L +   ES   L  ++ +AL     + A       +        + + A+   A  
Sbjct: 299 TVQELLKKQPESESLLFCLAYVALAQTDTELASKVFKKVLNEQNAHAHWRIAARCFAAQG 358

Query: 373 HNTDKIL 379
              + + 
Sbjct: 359 LEHEALQ 365


>gi|301059207|ref|ZP_07200145.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300446697|gb|EFK10524.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 578

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 77/240 (32%), Gaps = 25/240 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPA-----TR-EFAVYSLYFESCRIGDLNSAQR 175
             L   +AL + ++  A   LE  +   P      T+    +  L            A  
Sbjct: 52  NFLLASVALNQGRFRDARVHLEQAIRNDPDSVYLNTKMAILLKGLKK-------YPEALA 104

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           YA K++++ P        +   Y L  +   AI       K      R R +L+     +
Sbjct: 105 YAQKSVNMDPQNTRTLTLLGDLYALTGKDELAIAEYQNILKQDPGNKRVRLLLITILVRQ 164

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--P 293
              +   +      I   K     I+A     +  +     + AE  L +  K N    P
Sbjct: 165 KQFE-KSLVQLDTLI---KQDPELIIAYYYKGRINLETGNYKAAEKALNEALKRNQTLEP 220

Query: 294 EI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +   A +Y   ++E          RL  +  +++ +   + ++ L +     A  +  L
Sbjct: 221 ALFDKATLYQ--ITERDKEAAGAYERLLSLYPDNIPARERLVEVYLNLDQKKDAAHQVEL 278


>gi|126726744|ref|ZP_01742584.1| probable tpr domain protein [Rhodobacterales bacterium HTCC2150]
 gi|126704073|gb|EBA03166.1| probable tpr domain protein [Rhodobacterales bacterium HTCC2150]
          Length = 556

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 13/197 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           ++G+  +      +AL+  P+ P     +        +   AI F     + A  +   +
Sbjct: 63  QMGEKEAGHTMMREALEKDPEDPIQLCDIGTFLAQDGKIEDAIPFFRTATEVAPNYGIAQ 122

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + L  A  +E         +     ++ +L    + A    + + +  N   KA  IL K
Sbjct: 123 SNLGGALVIEK----KYGEAIKHLEKACELEPGLMDAHTNLSTAYMQTNNFGKAVDILFK 178

Query: 286 IWKVNP-----HPEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              ++P     H ++ A +Y     E+     +RA+ L     ++ E+ + +       G
Sbjct: 179 ALSIDPQSIGGHIQLSAALYRKERYESAEHHARRAIELA---PQAAEAYLHLGNALASAG 235

Query: 340 SIDQAHAKAMLAMKIAP 356
            I++A A  +      P
Sbjct: 236 KIEEAAAALLPIAGRPP 252



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A ++  KA ++ P        +   Y+    + +A+  L +    + +       + ++ 
Sbjct: 138 AIKHLEKACELEPGLMDAHTNLSTAYMQTNNFGKAVDILFKAL--SIDPQSIGGHIQLSA 195

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +L    K    ++ H A  +++L          AA++ +       +   +E+       
Sbjct: 196 AL--YRKERYESAEHHARRAIELAPQ-------AAEAYLHLGNALASAGKIEEA------ 240

Query: 293 PEIANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVS 332
              A     +     VG   L R + L +   +S E  ++ +
Sbjct: 241 ---AAALLPIAGRPPVGIPALSRLIHLRKTKADSPEMEILTA 279


>gi|124021994|ref|YP_001016301.1| hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962280|gb|ABM77036.1| Hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
           9303]
          Length = 837

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 29/271 (10%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           K  +   ++     + L+Y  +   + A+     A       +            L  ES
Sbjct: 7   KSEAGKQKKINNEKKGLLYFNKAVKSHAQGDIQQAKLLYLKSIAN---------GLENES 57

Query: 165 C---------RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                       GD   + R    AL I+P +      +    +   E++ A+   N+  
Sbjct: 58  LYTNLGVIYKNEGDFKESGRCYRSALRINPFSCDAYTNLSSLAIAENEFTSALDLANKAI 117

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K     +    +  +       + GD+  +    ++SL+L  ++  A +          +
Sbjct: 118 KLNPNCD----VANLNAGKALLELGDLEQALASTLKSLELQPDNHTAHMNLGSIYQDLGE 173

Query: 276 KRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             +A     K  ++ P +P+    +  IY  L  +           L EI  ++  + + 
Sbjct: 174 LDQALASTIKYLELKPDNPDALMNLGGIYKDL-GQLDQALASTLKNL-EIKPDNPTAHMN 231

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +  I  ++G++DQA    + ++++ P     
Sbjct: 232 LGVIYKDLGNLDQALTSTLKSLELQPDNHTA 262



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 30/295 (10%)

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYN 137
            N  KG       + S A  +I  A+ ++          NE L   L    I   E  + 
Sbjct: 17  NNEKKGLLYFNKAVKSHAQGDIQQAKLLYLKSIAN-GLENESLYTNL--GVIYKNEGDFK 73

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEA 193
            +       L+I      A  +L   +    +  SA   A KA+ ++P+         +A
Sbjct: 74  ESGRCYRSALRINPFSCDAYTNLSSLAIAENEFTSALDLANKAIKLNPNCDVANLNAGKA 133

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++      +  +A+    +  +   + +     L         D G++  +    I+ L
Sbjct: 134 LLEL----GDLEQALASTLKSLELQPDNHTAHMNLGSIY----QDLGELDQALASTIKYL 185

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308
           +L  ++  A +          +  +A     K  ++ P     H  +  IY  L + +  
Sbjct: 186 ELKPDNPDALMNLGGIYKDLGQLDQALASTLKNLEIKPDNPTAHMNLGVIYKDLGNLDQA 245

Query: 309 --GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM---KIAPRK 358
               LK       +  ++  + + +  I  ++G++DQA    + ++   +  P  
Sbjct: 246 LTSTLKSLE----LQPDNHTAHMNLGSIYQDLGNLDQALTSTLKSLELKRDNPDA 296


>gi|159045925|ref|YP_001534719.1| tetratricopeptide [Dinoroseobacter shibae DFL 12]
 gi|157913685|gb|ABV95118.1| tetratricopeptide [Dinoroseobacter shibae DFL 12]
          Length = 811

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 91/291 (31%), Gaps = 14/291 (4%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           KM + V   +   +     +   Q+ LA      A + +E  L    T   A+       
Sbjct: 330 KMQAIVDAANESSDTNRFKVALAQMLLATGNEVGARQLVEETLVEDPTNVDAIKMQASWL 389

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               +   A      ALD +PD P +   +   ++   +   A   L+   + +      
Sbjct: 390 IDRDETERAISLLRTALDQTPDDPQLMTLIANAHMRNGDRELARDLLSLAVETSSYAPEE 449

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                +  +       + + +    + +L+   ++    +  A+  +      +AE + E
Sbjct: 450 S----LRYARLLVSTEEFLTAEDVLVNALRRAPSNTQLLLALAEVYLQLEDWARAEHV-E 504

Query: 285 KIWKVNPHPEIANIYTHLL------SENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
              +    P +      +        +     L     L   +  +  +L    +  L  
Sbjct: 505 TTLRGLDQPGVREAADSIRVAILNGQQRQGEALDLLSNLATQDGGNFTALTATVQSLLNA 564

Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           G  ++A A    A+   P   ++ +L A ++ +          +   AL A
Sbjct: 565 GEAERARAMVDEALAQDPDSFQVLVLDAALKNSVGDFEGAAKSY--RALSA 613



 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 71/256 (27%), Gaps = 26/256 (10%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR- 153
           + A     AR M      Q    + + V +L+  +  +   +  A +    +        
Sbjct: 562 LNAGEAERARAMVDEALAQD--PDSFQVLVLDAALKNSVGDFEGAAKSYRALSARQEAGE 619

Query: 154 ---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 V +L     R G+  +A     +      +  W   + ++    A +   AI  
Sbjct: 620 RIWLELVRTLNRL-QRPGEARAALAEGLERFPQGANLLWAQASTLE---QAGDIDGAIEI 675

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKS 269
             +  + +         L    S    D+  +  +Y  A    +L      A        
Sbjct: 676 YERLYEQSSGSIVVSNNLASLLSTHRTDEASIERAYRIAR---RLRGTENPAFQDTYGWL 732

Query: 270 LISQNKKRKAEVILE-------KIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEIN 321
              +    +A   LE           V  H  +A  Y     +E+   + +    L  + 
Sbjct: 733 AYLRGDYAEAVEYLEPAAAALSSDALVQYH--LAMAYLAAERTEDAAEQFR--KSLALVG 788

Query: 322 KESVESLVIVSKIALE 337
            +        ++  L 
Sbjct: 789 PDETRPQFATAREELN 804


>gi|284054256|ref|ZP_06384466.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca]
          Length = 228

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 16/176 (9%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L+S     +    +    ++Q H         +L  Q          A +    +L+   
Sbjct: 23  LISQGQGQVRDVVEPLQRLAQLH--PETPEYGILLAQAQEYTGDPEAAAQSYRRILEQRP 80

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLA 201
               A+  L           +A       L  +P         +            Y   
Sbjct: 81  GEVQALQGLVSLLISQDRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQ 140

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           + +  AI   ++  KN++   R     ++A+++    +G+   +     E++ L  
Sbjct: 141 QRYQEAIAVYDEAIKNSESDFRP----VLAKAIILRQQGNPDDAELLFAEAIDLAP 192


>gi|149607993|ref|XP_001521471.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 801

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 97  SGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDR 156

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        S A++ L +  +        R+R  L            D  A+
Sbjct: 157 PDVLEQRAEILSPLGRVSEALSDLTKAIQLQPSARLYRHRGTLHFISE-------DYAAA 209

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYT 300
           + D  +SL L  N  +A +    +   +   ++A    ++  K     ++ +  +   Y 
Sbjct: 210 HEDFQQSLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYR 269

Query: 301 HLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            L + E      +RAL L   N   V++L +   +    GS+ +A       +++ P  E
Sbjct: 270 ELGNFEAATESFQRALLL---NHNHVQTLQLRGVMLYHHGSLQEALKSFKRCLQLEPYNE 326

Query: 360 IFLLL 364
           +   +
Sbjct: 327 VCQHM 331


>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
 gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
          Length = 734

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 93/285 (32%), Gaps = 39/285 (13%)

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
           F+     +  M   R  +   +++Y  L++   +N  +   + +    Q  F    L+ L
Sbjct: 32  FIKEEEAVALMDQGRLQEA--ESIYRELIAAGTNNHIVYGNLAALCGMQGRFS--ELIKL 87

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  +    +  Y  AH                 Y+L       GDL +A     KAL + 
Sbjct: 88  LR-RTLEIKPNYPEAH-----------------YNLGLALKEQGDLTAAIASYNKALQLR 129

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGD 241
           P+ P     +   Y    + + AI   N   +   N  E + N  ++L         +GD
Sbjct: 130 PNYPEAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNNLGVVL-------KKQGD 182

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
             A+     ++L+L  N   A      +   Q     A     K  ++   P  A+ Y +
Sbjct: 183 PTAAITSYHQALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLK--PNDADTYNN 240

Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           L        +    +    +  ++     ++    +   L  G  
Sbjct: 241 LGNALKEQGDLTAAIDSFNKALQLKPNFPDAQWNSALTMLLGGDY 285



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 11/165 (6%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              +   +S  I  L +  +    +    A   +  +L+  ++GD+ A+     ++L+L 
Sbjct: 74  LCGMQGRFSELIKLLRRTLEIKPNYP--EAHYNLGLALK--EQGDLTAAIASYNKALQLR 129

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKL 311
            N   A      +   Q     A        ++NP     H  +  +       +    +
Sbjct: 130 PNYPEAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNNLGVVLK--KQGDPTAAI 187

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +  ++     E+   +     E G +  A A    A+++ P
Sbjct: 188 TSYHQALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKP 232


>gi|222053755|ref|YP_002536117.1| glycosyl transferase family 2 [Geobacter sp. FRC-32]
 gi|221563044|gb|ACM19016.1| glycosyl transferase family 2 [Geobacter sp. FRC-32]
          Length = 3011

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 92/276 (33%), Gaps = 24/276 (8%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQI 149
            G++         A       +Q    +  +   L           +   A +    +L +
Sbjct: 1142 GVLYSNLGETEKALAHFEQATQLEPTNATFQKNL--ADFYQVVLGRTEDALQIYVKLLAM 1199

Query: 150  PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                   +  L      +G  + A+ + T+AL+I P    + +++            A+ 
Sbjct: 1200 HPKDLEVLAGLGKICVSVGKHDDARHFFTRALEIEPWNLEIRKSL-----------EALE 1248

Query: 210  FLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               ++ ++               ++++ A +     +       L+      +A      
Sbjct: 1249 EFRRQPEQIGPAATVEEMY---GKAVDLAGRNLTAEAIAALENLLQHFPQFALAHNDLGV 1305

Query: 269  SLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKE 323
                Q ++ +A    E+  ++ P        +A+ Y H++   T   L+  ++L  +  +
Sbjct: 1306 LYGQQGQQDQAVAHHEEAARLEPGNGTFLKNLADFY-HMVMGRTEQALQIYVKLLAVQPK 1364

Query: 324  SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +E L+ +  + + +G +D        AM+I P   
Sbjct: 1365 DLEVLMALGNLCVAIGKLDDGECFFTRAMEIEPWNR 1400



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 55/164 (33%), Gaps = 7/164 (4%)

Query: 195  VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            + +  L  +W        +K       +      L   +++ A+ G    +     + ++
Sbjct: 2800 LDKEKLRGKWEFYYQLGKKKLAE----HPRDVQALTELAIQAAELGKHDEALELWGQVVE 2855

Query: 255  LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKL 311
               +S  A      + + Q +  +A    ++   ++PH + A        L S   V   
Sbjct: 2856 QEPDSANAHFNMGHAYLCQGRYGEALCSSKRAVALDPHAKEAVFNYGCCELYSGEIVSVA 2915

Query: 312  KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                 L   + +   ++ +++ I   +G  D+   +     ++ 
Sbjct: 2916 TLLENLLVNHPDYPPAIALLASIHFCLGEQDKGRQRLQQVREMN 2959



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 26/213 (12%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE----------------WS-RAITF 210
            G    A +   K L + P    V  A+    V   +                W+      
Sbjct: 1346 GRTEQALQIYVKLLAVQPKDLEVLMALGNLCVAIGKLDDGECFFTRAMEIEPWNREVRES 1405

Query: 211  LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC--DNSIMASICAAK 268
            L   K+  +    +  +   A +   A   D +     A+E L LC   N   A      
Sbjct: 1406 LAAVKEYRETAQADMGVAESAYAEIQALPEDQVEQKIAALEKL-LCRHPNFATAHNDLGV 1464

Query: 269  SLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
               +Q    KA    E+  ++ P        +A+ Y H++   T   L+  ++L  +  +
Sbjct: 1465 LYTNQGAMEKALEHQEEATRLEPTNAVFQKNLADFY-HIVLGRTEEALQIYVKLLAVKPK 1523

Query: 324  SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +E L  +  + L +  +D A      A+++ P
Sbjct: 1524 DLEVLTALGNLCLSLDRLDDAACFFTRALEVEP 1556



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 31/198 (15%)

Query: 127  VQI-------ALAERQYNIAHEKL-EMMLQIPA-----TREFAVYSLYFESCRIGDLNSA 173
             Q        A      + A E     M   P      T    +    + +   G+   A
Sbjct: 2453 AQALNLKGVLAFRAGDRSRAEELFTSAMAADPGFGEACTNLGVLR---WSAQAHGE---A 2506

Query: 174  QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                 K   ++P      E        ++++SR      ++ +     +R     LI   
Sbjct: 2507 LELLEKGFMLNPTVSDAMERYHSAISASEQFSRGEAVF-REARAIFPHSRLITFKLIDLL 2565

Query: 234  LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-------ILEKI 286
            L      + +A    A+      D  I A++   K+L  Q ++ +A         ++ K 
Sbjct: 2566 LNQQKYEEAMAEIEQAMVGFGADDGIIDAALHVRKTLDGQKERPQAGAPGSISLCMIAK- 2624

Query: 287  WKVNPHPEIANIYTHLLS 304
                PH  +A     +  
Sbjct: 2625 -DEAPH--LARALASVKP 2639


>gi|119357636|ref|YP_912280.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 3560

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 44/169 (26%), Gaps = 4/169 (2%)

Query: 118  NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            NE  V L        E + + A      +L        A+      + +  D   A    
Sbjct: 2901 NEESVKLQRALKLHQEGRLDEAEALYREILSSSPEHFDALRLSATIAAQRHDSEKALALF 2960

Query: 178  TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             +AL I PD               K +  A+    +      ++    A     R     
Sbjct: 2961 DQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIVLKPDY----ADAYSNRGNTLM 3016

Query: 238  DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                   +      ++ L   +  A      +L    +  ++    EK 
Sbjct: 3017 KMNQYKEALESYERAIALKPENADACFHQGNALQELKRYNESLASYEKA 3065



 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 58/208 (27%), Gaps = 38/208 (18%)

Query: 118  NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
             E  V L        E + + A    + +L I      A+  L   + R      A    
Sbjct: 2222 KEESVKLQRALKLHQEGRLDEAEVIYQEILSIQPLHIEALQFLASMATRRKKYTDAVSLF 2281

Query: 178  TKALDISPDAPWVTEAV---------------------------VQQYVLAK-------E 203
             +AL+I PD P     +                           V+ Y            
Sbjct: 2282 ERALEIDPDHPVSWCTLGIALHELGRYEEALASYEKAIVLYPGFVEVYSNRGNTFLILKR 2341

Query: 204  WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            +  A++   +      E+ R        R     +      +  D  +   L  + I+A 
Sbjct: 2342 YQEALSSYEKALAINPEYTR----AYFNRGSALLELKRYEEALADYDKVTALKPDYIVAY 2397

Query: 264  ICAAKSLISQNKKRKAEVILEKIWKVNP 291
            I  A  L    + R+A    EK   + P
Sbjct: 2398 INCAVVLQELKRYREAIGSYEKALALKP 2425



 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 60/209 (28%), Gaps = 19/209 (9%)

Query: 118  NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
             E  V L        E + + A      +L        A+      + +  D   A    
Sbjct: 1474 KEESVKLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQLSATIAAQRHDSEKALVLF 1533

Query: 178  TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR 232
             +AL I PD               K +  A+    +      ++     NR   +  + R
Sbjct: 1534 DQALAIKPDHARSLNNRGIALQELKRYDEALESYERAIAVKPDFIEPYSNRGNTLQELKR 1593

Query: 233  SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
              E     D   +     E                ++++  N KR  E +L     +   
Sbjct: 1594 YEEALACYDSAIALKPENEQFYYH-----------RAVVLHNMKRYEEALLNYDHVLALK 1642

Query: 293  PEIANIYTHLLSENTVGKLKRA-LRLEEI 320
            P+ A  Y++    N +  LKR    L   
Sbjct: 1643 PDCAEAYSN--RGNILTGLKRYEEALASY 1669


>gi|87307492|ref|ZP_01089636.1| TPR domain protein [Blastopirellula marina DSM 3645]
 gi|87289662|gb|EAQ81552.1| TPR domain protein [Blastopirellula marina DSM 3645]
          Length = 1429

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 96/282 (34%), Gaps = 59/282 (20%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E+  +G+L  A  + ++ LD++P+     E + +  V  + W+ A + L Q  +   +  
Sbjct: 44  EAKEMGNLPEAIDHLSRYLDVAPENTEAMEQLGELLVQTRRWNEAFSVLEQTLRREPDRV 103

Query: 223 RNRAILL--------IARSLENADKGDMIASYHD---------------AIESLKLCDNS 259
            +R  L          + + E  ++    ++                     +   C+++
Sbjct: 104 ESRLRLAEVSLALGRFSDAKEQLEQIIASSAADAETYLLLAACHSANGQWRSAADACEDA 163

Query: 260 I-----------------------MASICAAKSLISQNKKRKAEV-ILEKIWKVNPHPEI 295
           I                        A+  A    +       AE  +L   W++      
Sbjct: 164 IKKDSANIAAYQQLAALQRSRLDDPAASEATIDQVVSANPTNAEAWVLRGAWRLQYRDSA 223

Query: 296 ANIYTHLLSENTVGKLKRALRLEE----------INKESVESLVIVSKIALEMGSIDQAH 345
           A       S+    ++     L +          ++  + +++ + + I L       A 
Sbjct: 224 ATQSAIAKSQEVSPRVGSIEVLSQASDDAEKAIQLDPMNADAVRLAASILLVEKDYAAAR 283

Query: 346 AKAMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSAL 386
             A  A++IAP     ++L AQIE A  +  ++  +W +  +
Sbjct: 284 KLADKAIEIAPEASASYVLRAQIEAAAENP-ERASHWLKKGI 324


>gi|324111859|gb|EGC05839.1| cellulose synthase operon protein C [Escherichia fergusonii B253]
          Length = 1157

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 14/255 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++    I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ PE    Y 
Sbjct: 477 WGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536

Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351
             LS +   +  L     L   + N    E  + +    V + A  +    +      + 
Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAML 596

Query: 352 MKIAPRKEIFLLLAQ 366
            +  P   I L LA 
Sbjct: 597 RQQPPSSRIDLTLAD 611



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     +    +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692


>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
          Length = 125

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               +  Y  A E  +  L++      A Y+L     + GD   A  Y  KAL++ P+  
Sbjct: 18  AYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNA 77

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKK 215
                    Y    ++ +AI    +  
Sbjct: 78  KAWYRRGNAYYKQGDYQKAIEDYQKAL 104


>gi|256843087|ref|ZP_05548575.1| TPR repeat-containing protein [Lactobacillus crispatus 125-2-CHN]
 gi|256614507|gb|EEU19708.1| TPR repeat-containing protein [Lactobacillus crispatus 125-2-CHN]
          Length = 415

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 21/230 (9%)

Query: 146 MLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           +  +P +    + SL  ++      G + +A+    +AL ++P+   +   + +   L+ 
Sbjct: 89  LYNVPESSSAYLDSLLVQADYYQTNGLIETAKDKLIRALQLAPEEDAIKFGLAEIEYLSG 148

Query: 203 EWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + +A+     L +++    E N  + +      L N ++   +     A   L +    
Sbjct: 149 NYEQALELYQDLIKRQSTFSEVNLYQRLFATFAKLGNYEEAAEVI-REHANSILDIDSK- 206

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314
                 A   L+S    ++A   L+++ + +P     +P +A  Y H    +    L+ A
Sbjct: 207 ----YEAGLVLLSVGDDKQAIKFLDEVIEQSPDYVNAYPLLAQAYDH--QHDNEQVLRTA 260

Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 N E  E+L  + ++ A  +  +D A       +K+AP      +
Sbjct: 261 QAGLAYN-ELDETLYSMGARAAANLNELDTARDLLEKGLKVAPDNSDLRM 309


>gi|225851488|ref|YP_002731722.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
 gi|225645952|gb|ACO04138.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 934

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 66/200 (33%), Gaps = 12/200 (6%)

Query: 91  GLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           G +   + +   A K +  Y+              L  +I   +   + A   ++ +   
Sbjct: 714 GYLKYISGDKDQAVKILTRYIKIYPRGEFNVQAKELLAKIFEEQGDLDKAIAVMKKLPAT 773

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-PWVTEAVVQQYVLAKEWSRAI 208
              +      L     + G    A+ Y  +     P     +   + +       +  A+
Sbjct: 774 DENKFK----LAMLLYKAGRYTEAKSYFEEIYTRFPKYRADIAFYLGKIQFENGYFQNAL 829

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-- 266
            +L +   ++   N   +  LI    E  +  D+  + +  I  + L  ++    I A  
Sbjct: 830 RYLEEALNSSDYNNVAESYYLIGLIYEKLE--DIENALNSFINVIYLYPDATEQVIKARL 887

Query: 267 --AKSLISQNKKRKAEVILE 284
             A+ +  Q ++ +A  IL+
Sbjct: 888 KVAEIMKKQGRRSEASCILK 907



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 126/368 (34%), Gaps = 66/368 (17%)

Query: 75  MLHKRNYDKGYKALYTGLM----SIAAHNIPLARKMHSYVS------------------- 111
              KRNY K Y+A     M    +  A ++  A  +                        
Sbjct: 485 FFKKRNYQKAYEAFTDEYMKAVSAFNAGDLDKAYSLVKGKKDRKSRFLLAYIFMRKGDID 544

Query: 112 ------QQHTFHNEYLVYL---LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
                 ++ +  ++ +      L      +E +Y  A +      +     E    ++  
Sbjct: 545 KARDILRELSKGDDKIAQQAGYLYAYSYFSEGKYIEAIKAFRDYAEKYRGTELGNLAVLR 604

Query: 163 ES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            +      G    A++   + ++   + P   +A  Q  VL  E S A    +Q +K  +
Sbjct: 605 MADSYYNAGQKEKARKIYQQFIEEHANTPEAIDAAYQLTVLEMEESGA-DVASQIEKFIE 663

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK-SLISQNKKRK 278
           ++ +   + L+   L     GD+     +  ++ K+    I A I  ++ +L      + 
Sbjct: 664 KYPQYPFVSLLKLQL-----GDLYTEKQEYDKAEKIYRELIEADIKESEYALYKLGYLKY 718

Query: 279 -------AEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEINKE 323
                  A  IL +  K+ P  E        +A I+         G L +A+ + +    
Sbjct: 719 ISGDKDQAVKILTRYIKIYPRGEFNVQAKELLAKIF------EEQGDLDKAIAVMKKLPA 772

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYW 381
           + E+   ++ +  + G   +A +         P  R +I   L +I+  N +  + + Y 
Sbjct: 773 TDENKFKLAMLLYKAGRYTEAKSYFEEIYTRFPKYRADIAFYLGKIQFENGYFQNALRY- 831

Query: 382 TQSALHAM 389
            + AL++ 
Sbjct: 832 LEEALNSS 839


>gi|167585808|ref|ZP_02378196.1| HemY domain protein [Burkholderia ubonensis Bu]
          Length = 395

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/403 (12%), Positives = 121/403 (30%), Gaps = 33/403 (8%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAVLFAIAAALATVGRFDTGQVLLVYPPYRVDLSLNLFVVGIVVLFIVVYALMR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARARNEKAQASLRDAIANLYAGRFSRAEKAARDALSIDANQGAA 122

Query: 121 LVYLLEVQ-------------IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            +                     +   ++  A       ++  A       +   E    
Sbjct: 123 SLVAATAAHRMHEYARRDDWLSKVGAPEWQDARLLAAADMRADARDADGALAALAEMQAG 182

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    AQ+ A +A     +  W     +         ++A+         A    R +A 
Sbjct: 183 GKRIHAQQVALRAQQQLKN--WAEVLKL---------AKALEKREALHPAAAVRLRQQAA 231

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
             + R   + D   ++  +     + +        +  AA  L+S  ++ +A  I+E   
Sbjct: 232 ENLLRERRH-DPDALLEVWQSLSTAERQSPRL---ADLAADLLVSLERRPEARRIVEDAL 287

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
             N    +   Y      + +  +++A   ++ + +  + L  + ++  +     +A + 
Sbjct: 288 AHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLWGKAQSF 347

Query: 348 AMLAMKIAP----RKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
              A+K+A     R      LA++ +          ++ +SAL
Sbjct: 348 LESALKLADNEALRVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|301631945|ref|XP_002945052.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 5-like [Xenopus (Silurana) tropicalis]
          Length = 462

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 35/201 (17%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220
              A+    +A+  +PD P     +       +E+           +   L +  K    
Sbjct: 166 YERAKGCFEEAVKGNPDDPEWNTGLATVVCRLEEFRGRNCPAFKSVSFQLLERAVKLNP- 224

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                +++ +  +L+  +      +    +++L+L  +        AK      K  +A 
Sbjct: 225 ---KDSVIKVLLALKLQELKRQEEAMKHIMDALELTPDLPYVLRYVAKFYRRAGKFEEAI 281

Query: 281 VILEKIWKVNP-----HPEIANIYTHL------------LSENTVGKLKRALRLEEINKE 323
            +L K   + P     H ++   Y  +              ++T         L E    
Sbjct: 282 RVLTKALSMTPNSGFLHHQLGLCYRQMIIQRKGTGNGNCRGQDTQE----IKDLTEKAIF 337

Query: 324 SVESLVIVSKIALEMGSIDQA 344
             E +V + K  L     D A
Sbjct: 338 HFEKVVELKKTFLHAH-FDLA 357



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 18/145 (12%)

Query: 160 LYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           L     +       A ++   AL+++PD P+V   V + Y  A ++  AI  L +     
Sbjct: 232 LLALKLQELKRQEEAMKHIMDALELTPDLPYVLRYVAKFYRRAGKFEEAIRVLTKALSMT 291

Query: 219 KEWN-RNRAILLIARSLENADKG---------DMIASYHDAIES-------LKLCDNSIM 261
                 +  + L  R +    KG         D         ++       ++L    + 
Sbjct: 292 PNSGFLHHQLGLCYRQMIIQRKGTGNGNCRGQDTQEIKDLTEKAIFHFEKVVELKKTFLH 351

Query: 262 ASICAAKSLISQNKKRKAEVILEKI 286
           A    A   +  N+ +KAE   +K 
Sbjct: 352 AHFDLADMYVRSNQYQKAEETYKKA 376


>gi|16329708|ref|NP_440436.1| hypothetical protein slr2048 [Synechocystis sp. PCC 6803]
 gi|1652192|dbj|BAA17116.1| slr2048 [Synechocystis sp. PCC 6803]
          Length = 398

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 63/226 (27%), Gaps = 43/226 (19%)

Query: 133 ERQYNIAHEKL---EMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAP 188
           +  YN   +       +             +   +  +  +      +  +AL + P+  
Sbjct: 192 QGDYNRVRQLYNEIHSLQSDNEEAAV----MMGAALLQSSEYEQLITFNNQALRLFPNRS 247

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +T  + + Y+   +   A   L  +     +W      L  A  LE   +G+   +   
Sbjct: 248 ELTLQLGKAYLAQGDLVAARRALEPRL--NPDWRSFSLYLTWAELLE--REGNFAGALDA 303

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             ++L+    +I A I   +  +  +         E +W                     
Sbjct: 304 YKQALRNEPTAIAAKIGTGRMYLELDNPA------EAVWV-------------------- 337

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                   L  +   + +   ++ +       ID A      A K+
Sbjct: 338 -----FRDLTRLQPSNADFYYLLGEAYAVDEKIDLAKKSFGEAKKL 378


>gi|148264943|ref|YP_001231649.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146398443|gb|ABQ27076.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 265

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 71/222 (31%), Gaps = 12/222 (5%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY  L   L    +     A K  +   +      E L  L    +     ++  A    
Sbjct: 41  GYFCLGEAL--AESGKQDEAIKTITAGLELAPDDVEALTAL--GDLYFEGGRHKDAIACY 96

Query: 144 EMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           + +  +            L + S    D   AQ+    AL++ P   +   A+   Y   
Sbjct: 97  KKVTDLRPKEADGYVSIGLVYNSLERVDD--AQKAFNSALEVDPHNVFALNALGDLYYGL 154

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +   A+       +   E + + A           D GD+ A+  + +E+++L  N  M
Sbjct: 155 GKNDEAV----AAYRKGIEIDPDDATAYFNLGDLYYDLGDLDAAEKETLEAIRLDPNFTM 210

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           + +      I Q +   A    E   K    P+ A +   + 
Sbjct: 211 SYLTLGNVCIDQERLTDAVKYFELYLKKEKSPQAAEMIAEVK 252



 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 91/265 (34%), Gaps = 17/265 (6%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L E    L   +Y  A  +    ++I        + L       G  + A +  T  L+
Sbjct: 8   RLAEGISLLETGEYGKAATEFSACIEIEPDNPEGYFCLGEALAESGKQDEAIKTITAGLE 67

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241
           ++PD      A+   Y        AI    +      KE +   +I L+  SLE  D  D
Sbjct: 68  LAPDDVEALTALGDLYFEGGRHKDAIACYKKVTDLRPKEADGYVSIGLVYNSLERVD--D 125

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IA 296
              +++ A+E   +  +++ A            K  +A     K  +++P        + 
Sbjct: 126 AQKAFNSALE---VDPHNVFALNALGDLYYGLGKNDEAVAAYRKGIEIDPDDATAYFNLG 182

Query: 297 NIYTHLLSENTVGKLKRALRLEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           ++Y  L   +   K      LE I        S + +  + ++   +  A     L +K 
Sbjct: 183 DLYYDLGDLDAAEK----ETLEAIRLDPNFTMSYLTLGNVCIDQERLTDAVKYFELYLKK 238

Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379
               +   ++A+++       +++ 
Sbjct: 239 EKSPQAAEMIAEVKAVVEGLKEEMR 263


>gi|254293095|ref|YP_003059118.1| hypothetical protein Hbal_0727 [Hirschia baltica ATCC 49814]
 gi|254041626|gb|ACT58421.1| TPR repeat-containing protein [Hirschia baltica ATCC 49814]
          Length = 660

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 105/297 (35%), Gaps = 20/297 (6%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQ 174
            +    L   + A+   Q+  A  +LE +L  P    +A  +LY  +         + AQ
Sbjct: 5   QQAAEQLKRAKAAMYANQFAQACIELEPLLDNPE---YAQEALYMHAVCGRYQNKFDVAQ 61

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            +  K L I+P+     +      +   +   A+       +    +N         ++ 
Sbjct: 62  SFLDKLLAIAPEFGRAHQEAGYLALAQGQKEIALKQFIAACR----FNPALTASWEKQAG 117

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292
              + G    + +   ++ +L   S    + AA + +++ K  KAE +     K +P   
Sbjct: 118 LLRETGQKEQAINAQAQADRLKSLSKP--LYAATNFLAEGKLLKAEDLCRIHLKSSPKDV 175

Query: 293 ---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                +A+I + L        L    +  E   ++++  +   +I  +     +A  +A 
Sbjct: 176 EAMRLLADIGSRLGVLEDAEIL--LEKAVEFEPDNIQLRLDYIQILRKRQKFSRALEEAK 233

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPLWISDDGYLSSVW 405
               + P   IF     IE+  + + +  +    + L     DP  ++  G+    W
Sbjct: 234 RLYDLDPENAIFRSHYAIEKMQTGDYEGAVELMDAVLETLPHDPATLTSRGHALKTW 290



 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 37/261 (14%)

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG--------LMSI--------------- 95
           F V++ FL     +     + + + GY AL  G         ++                
Sbjct: 57  FDVAQSFLDKLLAIAPEFGRAHQEAGYLALAQGQKEIALKQFIAACRFNPALTASWEKQA 116

Query: 96  ----AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
                      A    +   +  +        L      LAE +   A +   + L+   
Sbjct: 117 GLLRETGQKEQAINAQAQADRLKSLSKP----LYAATNFLAEGKLLKAEDLCRIHLKSSP 172

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+  L     R+G L  A+    KA++  PD   +    +Q     +++SRA+   
Sbjct: 173 KDVEAMRLLADIGSRLGVLEDAEILLEKAVEFEPDNIQLRLDYIQILRKRQKFSRALEE- 231

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKSL 270
               K   + +   AI     ++E    GD   +    ++++        A++     +L
Sbjct: 232 ---AKRLYDLDPENAIFRSHYAIEKMQTGDYEGAVEL-MDAVLETLPHDPATLTSRGHAL 287

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
            +  K+++A        +  P
Sbjct: 288 KTWGKQKEAIASYNAACRARP 308


>gi|311747575|ref|ZP_07721360.1| adenylate/guanylate cyclase [Algoriphagus sp. PR1]
 gi|126575557|gb|EAZ79867.1| adenylate/guanylate cyclase [Algoriphagus sp. PR1]
          Length = 597

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 19/201 (9%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNA-KEWNRNRAIL 228
           +SA ++  KA+   P      + +     L  ++++A    L  K  +      R     
Sbjct: 251 SSAMKFIQKAVVARPTYAEAHQFLSFFNTLKGDFNKAKEHILYAKSVDPLNPETRFFQAN 310

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            + R+ E  +   ++ +  +  E        + A I +    I +N+ ++A+ +++K   
Sbjct: 311 YLYRTNELDEAIKILNALLEENEKN------LPALIVSTYIHIKENRLKEAKALIKKTPN 364

Query: 289 VNPHPE----IANIYTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKIALEMGSID 342
               P+    +  +   L        LK        +       S + +    L  G  D
Sbjct: 365 EVFTPDEKLGLNTLVDVLTGNQDTELLKELEEHAN-DPLAHHAHSYLFIIYANL--GRFD 421

Query: 343 QAHAKAMLAMKIAPRKEIFLL 363
           +A A      K      I LL
Sbjct: 422 EAFAVLEKIFKDK--SSILLL 440


>gi|87310163|ref|ZP_01092295.1| probable PKR inhibitor (translation regulation) [Blastopirellula
           marina DSM 3645]
 gi|87287153|gb|EAQ79055.1| probable PKR inhibitor (translation regulation) [Blastopirellula
           marina DSM 3645]
          Length = 556

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            + A   A +AL +      +     +  +L   + + A   L+   +N  E ++  +  
Sbjct: 102 RDKALADANRALKVDAKLGDMQLLKSRLLMLPDGDKAEAKKALDAAIENLTEDDQQLSKA 161

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           ++  +     + D         +++K   +++ A        + Q    KA   L+++ +
Sbjct: 162 IMMSA---TLEEDPALQIEKLTKAIKTDPDNVDALKLRGVLYMQQENFEKASADLKQVME 218

Query: 289 VNPHPEIA--NIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            NP+ ++A    Y   L+        +    +    +  S    ++ +++ +     + A
Sbjct: 219 KNPN-DVAVLQAYADTLAGMKKFDEAIALLDKTVAEHPGSPVGYLLRARLKVLAEDSEGA 277

Query: 345 HAKAMLAMKIAPRKEIFLLL 364
                  +   PR    L++
Sbjct: 278 IQDLDQVLAFIPRSIPALMM 297



 Score = 43.8 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L+ +   +   A+K      +  T  ++ L   + +   L E       +  + +   P 
Sbjct: 129 LLMLPDGDKAEAKKALDAAIENLTEDDQQLSKAIMMSATLEEDPALQIEKLTKAIKTDPD 188

Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 +  + +   +  +   A     + ++ +P+   V +A        K++  AI  
Sbjct: 189 NVDALKLRGVLY--MQQENFEKASADLKQVMEKNPNDVAVLQAYADTLAGMKKFDEAIAL 246

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L++             +  + R+       D   +  D  + L     SI A +  A+  
Sbjct: 247 LDKTVAEHPGSP----VGYLLRARLKVLAEDSEGAIQDLDQVLAFIPRSIPALMMRARLY 302

Query: 271 ISQNKKRKAEVIL 283
           I  ++   AE  L
Sbjct: 303 IDLDRPADAEQDL 315


>gi|254510924|ref|ZP_05122991.1| putative TPR/sulfotransferase domain protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221534635|gb|EEE37623.1| putative TPR/sulfotransferase domain protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 550

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 43/239 (17%)

Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            +  LL+  +   A ++   A +K   M   P  R   +      + +      AQ Y  
Sbjct: 13  SVTDLLKKGRADRAFKRATKAAKKWPKMAAFP--RLAGL-----CAVQQQKPKLAQTYFE 65

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +A  + P  P + +      V   E   A+ F+ +           R I     ++    
Sbjct: 66  RAWRMDPANPELIQNYGLSLVQGGESEAALRFIARIAARGPLTPAQRFI----HAMALLR 121

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +     +  +  E ++    ++ A    A  L  Q++   A  +L               
Sbjct: 122 EHQGAQALTEIDEVIRHQPTNLEAHCLKADILDEQHRWNDAIDVLVA------------- 168

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                             L E + +     + ++K  + +G +D+A   A +A ++AP 
Sbjct: 169 ------------------LVETHPKFHFGQLRLAKSLVGVGRLDEALTHARMAFELAPT 209



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 4/146 (2%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A   +   KG    ++  A ++ K           A    + Q K + A+   E+ W+++
Sbjct: 12  ASVTDLLKKGRADRAFKRATKAAKKWPKMAAFPRLAGLCAVQQQKPKLAQTYFERAWRMD 71

Query: 291 PH-PEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P  PE+   Y  + +    +   L+   R+      +     I +   L      QA  +
Sbjct: 72  PANPELIQNYGLSLVQGGESEAALRFIARIAARGPLTPAQRFIHAMALLREHQGAQALTE 131

Query: 348 AMLAMKIAPR-KEIFLLLAQIEQANS 372
               ++  P   E   L A I     
Sbjct: 132 IDEVIRHQPTNLEAHCLKADILDEQH 157


>gi|56751461|ref|YP_172162.1| hypothetical protein syc1452_c [Synechococcus elongatus PCC 6301]
 gi|56686420|dbj|BAD79642.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 788

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 9/197 (4%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           + +  +   T        L + ++AL ++Q   A   L+ M+  P   +   Y+L   + 
Sbjct: 342 LEAAATYLATLPRSPARILEQARLALTQQQPKAALALLDSMVM-PEAEQGEHYNLLGVAQ 400

Query: 166 RI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+ ++A     + L   P  P +   +       ++W  A+       +        
Sbjct: 401 TQLGEWDTAIAIYRQGLQAQPHHPKLRTNLCVALRQQEQWEEALALSQALLEEVPAAIDR 460

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               L+ ++      G    +     + +        A +  A+ L+ Q K  +   I E
Sbjct: 461 ----LLLQADTLNLAGRYDQALSLYQQVVAREPERANAQLAIAEILLRQGKA-EGWDIYE 515

Query: 285 KIWKVNPHPEIANIYTH 301
             +     P +A +  H
Sbjct: 516 ARFAAE--PSLAALAAH 530


>gi|218886558|ref|YP_002435879.1| response regulator receiver protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757512|gb|ACL08411.1| response regulator receiver protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 454

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 20/283 (7%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
              ++   +H    A K+   +       N     L+      A  + + A E  E   +
Sbjct: 163 ARAMVQQGSHES--ALKVCRKI--LELKPNSAAGLLVMGDAYQALGKMDRARECFEEASR 218

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                   +  L   + +IGD  +   Y  K   +SP        + + +V      +A 
Sbjct: 219 NADLYLEPLKKLADLNKQIGDSEAQLGYLEKLDRLSPLNVERKVDMGEIHVEMGNQEKAE 278

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-- 266
                    A          +  R      + D   +     ++L    + +        
Sbjct: 279 ELFELAVTQATREAMAYIGDISERIATIYSERDPERAERFLRKALDAKGDMLDRGDLGTF 338

Query: 267 ---AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGKLKRALRL--E 318
                +L  Q K R A +  +K  ++   P+  N+Y ++    +E    +  R+  L   
Sbjct: 339 NRLGIALRKQGKWRDATIEYQKALRIA--PDDENLYYNMSMAFAEGKEFRDARSNMLKAM 396

Query: 319 EINKESVESLVIVS----KIALEMGSIDQAHAKAMLAMKIAPR 357
            IN +       ++     + +  G  D A     +A+++ P 
Sbjct: 397 AINPDLPRRDKTIAFNMGLVFMRAGGRDYAERCLQVALELDPD 439



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 72/172 (41%), Gaps = 19/172 (11%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-- 290
           +     +G   ++     + L+L  NS    +    +  +  K  +A    E+  +    
Sbjct: 163 ARAMVQQGSHESALKVCRKILELKPNSAAGLLVMGDAYQALGKMDRARECFEEASRNADL 222

Query: 291 ---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
              P  ++A++   +   ++  +L    +L+ ++  +VE  V + +I +EMG+ ++A   
Sbjct: 223 YLEPLKKLADLNKQI--GDSEAQLGYLEKLDRLSPLNVERKVDMGEIHVEMGNQEKAEEL 280

Query: 348 AMLAMKIAPRKEIFLLLAQI----EQANS----HNTDKILYWTQSALHAMPD 391
             LA+  A R+     +A I    E+  +     + ++   + + AL A  D
Sbjct: 281 FELAVTQATREA----MAYIGDISERIATIYSERDPERAERFLRKALDAKGD 328


>gi|325107986|ref|YP_004269054.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324968254|gb|ADY59032.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 361

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 17/189 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + + G+L  A+    +A  +  D       + +  +   ++  A+  L    K   E   
Sbjct: 59  AQQAGNLEEARELLNEAAKLQSDHAETWWNLAELSIQQDDYPAAVDEL----KRYVELQS 114

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +     +  +     +    A+     E ++   N+  A + +A+    Q   +KA    
Sbjct: 115 SDPQGYLRLAQLYYLQNRYDAAEEWLDEVIRRTPNNFDAVMLSARLARKQADHQKAISEY 174

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
               +V PH             +    L+ +  L   ++    S ++       +   DQ
Sbjct: 175 YHALQVMPH-------------HAEATLELSELLIARHEPYRASSLLRDLSRRALMEEDQ 221

Query: 344 AHAKAMLAM 352
           A     L +
Sbjct: 222 ARTHLNLGI 230


>gi|188591112|ref|YP_001795712.1| hypothetical protein RALTA_A0320 [Cupriavidus taiwanensis LMG
           19424]
 gi|170938006|emb|CAP62990.1| conserved hypothetical protein; putative exported protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 647

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 109/376 (28%), Gaps = 69/376 (18%)

Query: 72  LFHMLHKRNYDKGYK--------------------ALYTGLMSIAAHNIPLARKMHSYVS 111
           L                                  A    ++ +AA + P A+     + 
Sbjct: 39  LARWWRAPRRHARALAAGALLAAAAGAAHAAPPVGAGSLPMLQLAAADTPAAKPARPALP 98

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 +  +  +L  +I++       A+     + +      FA  +    +       
Sbjct: 99  SLELTDD-IVYMVLAAEISIQRGLVGPAYRTYLELARQTRDPRFAQRATEI-AFNARIPQ 156

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--- 228
            A   A    +I+P +P   + +    VL   W  A   L Q+        R  AIL   
Sbjct: 157 QALDAARLWKEITPTSPAAGQVLSTLLVLNGRWDDARPLLQQQLATVPASQRGDAILQLQ 216

Query: 229 -----------------------------LIARSLENADKGDMIASYHDAIESLKLCDNS 259
                                         +A +      GD   +     ++L+L    
Sbjct: 217 QQLSRTSDPAGAARLLQDLTRNEAKLPETQLALARARELAGDEPGALAALDQALRLRPAY 276

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314
             A+   A  L ++ +  +A  +L++  + +P     H  +A +Y  L ++    + +  
Sbjct: 277 E-AAALMAAELRAEKQPDEAVAVLKRFLEKSPESVNGHITLARLYL-LKNDMPAAR-QEF 333

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKE---IFLLLAQIE 368
             L ++        + +   +L+  +  +A          ++  P       +  LAQI 
Sbjct: 334 ETLRKVAPADPRVPLALGLTSLQAKNFGEAEQYLQEYLQLVEKQPSANPDIAYQYLAQIA 393

Query: 369 QANSHNTDKILYWTQS 384
           +    +    + W   
Sbjct: 394 E-ERKDYAGAIRWLDR 408


>gi|45656035|ref|YP_000121.1| hypothetical protein LIC10125 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599268|gb|AAS68758.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 1197

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 66/179 (36%), Gaps = 5/179 (2%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +Y G   +   +  +A+  +    +      E  VY    ++     +   + E  +  L
Sbjct: 419 IYEGDRHLRKGDTKIAKTFYEKAKK--ASEQEPSVYNAFGRLHFISGELKASEENFKKAL 476

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            I      A+  L        +   A +Y  +  +++ + P     + + Y   KE+ +A
Sbjct: 477 SIDKQNIPALQGLIRLYSSQKNQTLANQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536

Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
                 L +K  N +  N   A+L    SLE  +K +  ++ +   ++ KL  +    +
Sbjct: 537 ENVYKNLQKKFPNNEAINFRLAMLYYKISLEENEKNNHDSALNWISKAEKLSKDIPEIA 595



 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 57/204 (27%), Gaps = 41/204 (20%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-----------TREFAVYSLYFESCRI 167
              + +     A+  ++Y  A    E   +              TR  +      ++ R 
Sbjct: 192 PAQLNMQLGDAAVQLKKYEEAEVYFEEARKNDPELLSAKKSASVTRVASALENGNQAMRK 251

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW------ 221
            +   A  +   A+   P  P     +    +L+ E+  A+           ++      
Sbjct: 252 KNYKEAASHFQTAIQNDPKNPTPYIFLGNARILSGEYEVALKAFESSLALKSDYQEAISG 311

Query: 222 ---------NRNRAILLIARS---------------LENADKGDMIASYHDAIESLKLCD 257
                    N  +++ ++ ++               L     G+   +      + +L  
Sbjct: 312 IAAVYYKTGNYRKSVAVLEKATSQFPNNAVYQNQMGLNMKALGEPAKALVYFTRAKELDP 371

Query: 258 NSIMASICAAKSLISQNKKRKAEV 281
             +         LIS+N+ + A  
Sbjct: 372 TFVEPVTNLVFLLISENRYKTARK 395



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 92/269 (34%), Gaps = 38/269 (14%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL   A      A    +   +      E +  L+   + ++E +Y  A ++ E +    
Sbjct: 347 GLNMKALGEPAKALVYFTRAKELDPTFVEPVTNLVF--LLISENRYKTARKEAESLKSES 404

Query: 151 ATREF------------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
             ++                 L     R GD   A+ +  KA   S   P V  A  + +
Sbjct: 405 EKKQIISFIDVSEQIYEGDRHL-----RKGDTKIAKTFYEKAKKASEQEPSVYNAFGRLH 459

Query: 199 VLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            ++ E   +     +    + +     + ++ +  S +N    +      + +       
Sbjct: 460 FISGELKASEENFKKALSIDKQNIPALQGLIRLYSSQKNQTLANQYTKELENLTGN--DP 517

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL--------LS 304
           +   A+I   ++   + +  KAE + + + K  P+ E     +A +Y  +          
Sbjct: 518 S---AAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAINFRLAMLYYKISLEENEKNNH 574

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK 333
           ++ +  + +A +L +   E  E+   + +
Sbjct: 575 DSALNWISKAEKLSKDIPEIAETRKTIQE 603


>gi|124516404|gb|EAY57912.1| protein of unknown function [Leptospirillum rubarum]
          Length = 468

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 87/306 (28%), Gaps = 29/306 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPW 189
                 A                 V +L   Y ++ R+ D  +                 
Sbjct: 131 TGDATGAIRLHRRARVFDEEDVRLVIALCEDYRQAGRLDDEMAILS--EYFHKKEGRNID 188

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR------AILLIARSLENADKGDMI 243
           V      + V  ++W  A+   +   ++  +  R          +       + D  +  
Sbjct: 189 VLGRYRDRLVSRQKWEEALAVQSALSRSFGKGERRDLEVSNLVGIRYETGRLHLDHAETE 248

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +      +LK+      A I  A++   + +  +A   LE+ ++ +  P    IY +LL
Sbjct: 249 LARRSFRGALKIDPLFSPARIGLAEAQSREGRVSEALTTLEEGFQKDRDP----IYLYLL 304

Query: 304 SE------NTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIA 355
            E      +    L    R    + ++  S ++ ++  L   +  +D A  +        
Sbjct: 305 EEMALEAGSPERILTPFERAVLSDPQN--SSLLYAQARLYDRLMMVDLALDRLESLEGRE 362

Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDDGYLSSVWLPLSPIS 412
             +   + LL  +    + +    L   Q    A   P  L+    G     W       
Sbjct: 363 NWEGEFYRLLGDL-YLRNKDRVNALEAFQKGARAENHPGRLYCRFCGQRYLQWTGKCFSC 421

Query: 413 KTLCYF 418
                 
Sbjct: 422 HRWGAL 427


>gi|168014093|ref|XP_001759590.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689129|gb|EDQ75502.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 817

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 17/217 (7%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNR 225
              A      A+ + P        V   +    ++  A       L   ++NA+EW    
Sbjct: 261 YEDALVSFQLAVQLKPQDVRAHFLVGNAFYSLGDFVEARTSYQKALEAGEENAQEWEGIL 320

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             + +   +    +G ++ +     E+  L      A      +L    + R A+  LE+
Sbjct: 321 PQVHVNLGIALEGEGMLLCACDHYREAAILNPRHYRALKLLGSALYGLGEYRAAQKCLEE 380

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              + P     H ++ +    L   +    +    +  ++N   V++L  +  +  +   
Sbjct: 381 ALVLKPDYADAHCDLGSALHSL--HDVEQAISEFQKAIDLNPNHVDALYNLGGLLKDSLR 438

Query: 341 IDQAHAKAMLAMKIAPRK------EIFLLLAQIEQAN 371
            ++A       +++ PR           LL   EQ  
Sbjct: 439 YERAAEMYQKVIQLKPRDWRAQLNRAVSLLGAGEQEE 475


>gi|302654959|ref|XP_003019275.1| hypothetical protein TRV_06679 [Trichophyton verrucosum HKI 0517]
 gi|291182989|gb|EFE38630.1| hypothetical protein TRV_06679 [Trichophyton verrucosum HKI 0517]
          Length = 938

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G++++ +R   +A   +
Sbjct: 579 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 637

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230
           P+   +  A V+      +  +A   L+  ++ A                 NR+ A+ L+
Sbjct: 638 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 697

Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            + L+                   G +  +        + C  S+   + A++       
Sbjct: 698 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 757

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     L +A  L     +E   S ++ S+
Sbjct: 758 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 815

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +  +      K+     +F+ +A+I        +K + W + A+ A  D
Sbjct: 816 SIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 873


>gi|308048847|ref|YP_003912413.1| sulfotransferase [Ferrimonas balearica DSM 9799]
 gi|307631037|gb|ADN75339.1| sulfotransferase [Ferrimonas balearica DSM 9799]
          Length = 656

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 71/208 (34%), Gaps = 14/208 (6%)

Query: 159 SLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQ 213
            L  ++      GD+ +A  +  + L  +P+        +        K+W  A   L +
Sbjct: 7   GLIQQAEAALKGGDIPTALTHTQQVLSEAPEHR--QGLYLAAVCHRYLKQWKPAERHLTR 64

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +    + R        +      +G +  +      ++      + +    A+     
Sbjct: 65  LLQLDPHYGRAHQ----EQGHTLLAQGKLQPAADAYRHAVSQNPALVASWAALARLAQHA 120

Query: 274 NKKRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
                A+  L   + +K  P P +  + + L     +   +      + +   +E++ ++
Sbjct: 121 GDGELAQRALAHHQHFKALP-PTLVTVNSLLHEGKLLKAEQLCRSFLQQHPSHIEAMRLL 179

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           +++A ++  +D A      A+++ P   
Sbjct: 180 AQLAAKLNVLDDAEVLLDSALQLEPGNR 207



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 16/210 (7%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + AL    ++  A +  LA++  +    QH         L+ V   L E +   A +   
Sbjct: 110 WAALAR--LAQHAGDGELAQR--ALAHHQHFKALPP--TLVTVNSLLHEGKLLKAEQLCR 163

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             LQ   +   A+  L   + ++  L+ A+     AL + P    V   +VQ     +++
Sbjct: 164 SFLQQHPSHIEAMRLLAQLAAKLNVLDDAEVLLDSALQLEPGNRQVRFDLVQVLHRRQKY 223

Query: 205 SRAI---TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           + ++     L   +     ++        A + +    G    +     + L    ++  
Sbjct: 224 AESLLQAETLRDSEPGNPSFD-------TAYANQLVAVGRFDEALALYDQVLAKLPDNAN 276

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +    +L +  ++ +A    +  ++  P
Sbjct: 277 LHLVKGHALKTLGRQPEAIEAYQASYRHRP 306


>gi|186477743|ref|YP_001859213.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184194202|gb|ACC72167.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
          Length = 708

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 6/187 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIAL-AERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           M +         +     +L+   A     +   A E  + +LQ       A++ L   +
Sbjct: 17  MDATAHAPAPLPDFDASAMLQAAFAHHQAGRTGEAAECYKQILQHDGMHPDAMHFLGVLA 76

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
           C +G+L +      K++ + P+A ++   +      A++   AI         A ++   
Sbjct: 77  CDVGNLPAGIDLIEKSIQLHPNAIYLNN-LGNMRGRARDLQGAIAAYRAALSLAPDY--- 132

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A           + GD  A+      + +L  +   A      +L+       A     
Sbjct: 133 -AQAHSNLGHTLREAGDPAAAIDSCTVATRLKPDLPQAWTHLGNALLELGSDEGALDSYM 191

Query: 285 KIWKVNP 291
           K   + P
Sbjct: 192 KALALQP 198


>gi|262304961|gb|ACY45073.1| acetylglucosaminyl-transferase [Armadillidium vulgare]
          Length = 289

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A +   + +   P     A
Sbjct: 34  GQVNEAEECYNTALRLCPTHADSLNNL--ANIKREQGFTEEATKLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVNEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFTEEATKLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q N A E     L++  T   ++ +L       G    A +   KAL++ P+
Sbjct: 27  ANALKEKGQVNEAEECYNTALRLCPTHADSLNNLANIKREQGFTEEATKLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYDARMKKLVTIVGEQLERNRLPSVHPHH 236


>gi|81298858|ref|YP_399066.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
 gi|81167739|gb|ABB56079.1| TPR repeat [Synechococcus elongatus PCC 7942]
          Length = 788

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 9/197 (4%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           + +  +   T        L + ++AL ++Q   A   L+ M+  P   +   Y+L   + 
Sbjct: 342 LEAAATYLATLPRSPARILEQARLALTQQQPKAALALLDSMVM-PEAEQGEHYNLLGVAQ 400

Query: 166 RI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+ ++A     + L   P  P +   +       ++W  A+       +        
Sbjct: 401 TQLGEWDTAIAIYRQGLQAQPHHPKLRTNLCVALRQQEQWEEALALSQALLEEVPAAIDR 460

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               L+ ++      G    +     + +        A +  A+ L+ Q K  +   I E
Sbjct: 461 ----LLLQADTLNLAGRYDQALSLYQQVVAREPERANAQLAIAEILLRQGKA-EGWDIYE 515

Query: 285 KIWKVNPHPEIANIYTH 301
             +     P +A +  H
Sbjct: 516 ARFAAE--PSLAALAAH 530


>gi|189467054|ref|ZP_03015839.1| hypothetical protein BACINT_03437 [Bacteroides intestinalis DSM
           17393]
 gi|189435318|gb|EDV04303.1| hypothetical protein BACINT_03437 [Bacteroides intestinalis DSM
           17393]
          Length = 474

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRN 224
           ++G+ ++A  Y  KA ++   AP      +    V   EW      L +     +     
Sbjct: 247 QLGNEDAALEYYQKAEELHGLAPEFIYTYIGLCKVSKGEWKEGYENLEKAILENETDEIA 306

Query: 225 RAILLIARS---LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             IL    +   L  +  G    ++    ++ KL      + +   +  I +    K   
Sbjct: 307 SPILPSLYANAGLCLSKMGKKRKAHQYCKKAHKLSPEEPESLLIEGRIYIEEGDYDKGIK 366

Query: 282 ILEKIWKVNPHPEIANIYTHL 302
              K    +P    A+ +  +
Sbjct: 367 QWAKALNCSPT---ADTWNEI 384


>gi|254787650|ref|YP_003075079.1| sulfotransferase domain containing protein [Teredinibacter turnerae
           T7901]
 gi|237685640|gb|ACR12904.1| sulfotransferase domain containing protein [Teredinibacter turnerae
           T7901]
          Length = 662

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 96/284 (33%), Gaps = 15/284 (5%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL     ++ A +   A      V Q++  H + L   L+            A + L  
Sbjct: 8   RALEQSECALKAGDHATALSAADAVLQENPQHRDGLY--LKAVCQRYLGNTKGALQTLTA 65

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           +             L      +GDL  A +   KA  ++P      +  ++Q     +  
Sbjct: 66  LQSAAPGYGRGFQELGHCQLMMGDLKQAFKAYKKATQLNPGLIASWQ-RLEQLAKQMD-- 122

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                  Q       +NR   +L+   S+    +G +  + +   + L+   +   A   
Sbjct: 123 -LRKEHTQASAQLAYFNRLPPLLVSITSM--LSEGKLYKAENLCRQFLQEHKHHPEAMRL 179

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEI 320
            AK     +    AE +LE    V  +PE A     L++     +     L +A +L E 
Sbjct: 180 LAKIGTQLHILDDAEFLLESC--VQLYPEFAQARLDLVNVLQKRQKYGKALTQATQLYEE 237

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           N    +     +  A+ +G  D A       ++  P+  +  L+
Sbjct: 238 NPVDRQIKSTYANAAMAVGDFDTALTTYDALLEQEPKNSVTWLM 281


>gi|221505095|gb|EEE30749.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii
           VEG]
          Length = 985

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 110/353 (31%), Gaps = 60/353 (16%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL  G ++ A        +     + +     + L   L    A  E ++    +  ++
Sbjct: 615 EALSRGSVATA--------RALYTCAIERLKTKKSLWLAL----ADLETKHGTTQDLEKL 662

Query: 146 MLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           + +     P      +  L  +    GD+ +A++   +A   + +   ++ A V+     
Sbjct: 663 LAKAVVCCPQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLEREN 721

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-- 259
            E++RA   L + + +          + + R + + D    IA   +A++S   C     
Sbjct: 722 HEFARARKILKRTRAHVNTQKVWIQSVQLERQVGDYDAA--IALCEEALKSHAECPKLWM 779

Query: 260 --------------------------------IMASICAAKSLISQNKKRKAEVILEKIW 287
                                           +   +CA      Q K   A  ILEK  
Sbjct: 780 IGGQLHREHPTKKDEEKAAEVFQRGTVVCCRSVPLWLCAVDCQREQGKWSVARAILEKAK 839

Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAH 345
             NP +PE+ +    +  E   G  + A  +      E   S ++ ++         Q H
Sbjct: 840 LRNPKNPELWHAAIRIEVE--AGNKQMAQHVASKAVQECPNSGLVWAEAIFLEEKSAQTH 897

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396
                  K      + L +A +         K   W   ++   A     W +
Sbjct: 898 KAVDALTKCENDVHLVLAVACLFWKEGK-ISKARKWLNRSVTLDASFGDAWAA 949


>gi|158337864|ref|YP_001519040.1| hypothetical protein AM1_4750 [Acaryochloris marina MBIC11017]
 gi|158308105|gb|ABW29722.1| tetratricopeptide repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 659

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 70/219 (31%), Gaps = 32/219 (14%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAER---------------QYNIAHEKLEMML----- 147
           +    +H   ++ L  L + Q                      +  A + L+ +      
Sbjct: 433 ADTLAKHGRPHDALRILRQAQANSLTGPLTITTLSKVLSQVGHHQEARKILQSVYPTKTQ 492

Query: 148 ---QIP----ATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                P      R  A +  +YFE  +    + A ++  +AL + P  P           
Sbjct: 493 FEYADPPISNEARLIAKHGEIYFELQQ---YDKALQHYDEALQLEPKFPLAHYHRGDVLR 549

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               + +AI       +                     ++  +  +     ++++L   +
Sbjct: 550 QLGHFDQAIEAYQTSLRLRSYSLDVTHKTYNGLGWSLFERKQVETAISAFKQAIRLNPQN 609

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN 297
             A     K+L++Q +  KA   L+  +++NP HP ++ 
Sbjct: 610 SAAHYGLGKALLTQQQSAKAIQHLQTAFELNPRHPGLSE 648


>gi|328700632|ref|XP_003241333.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Acyrthosiphon pisum]
          Length = 1090

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 35/304 (11%)

Query: 71  MLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVY 123
            L +  H          GY  L   L++  A ++  A + +    Q   +       L  
Sbjct: 155 ALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPELYCVRSDLGN 212

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKA 180
           LL+        + + A       L+   TR     A  +L      + ++  A  +  KA
Sbjct: 213 LLKA-----LGRLDEAKSCY---LKAIETRPDFAVAWSNLGCVFNSLNEIWLAIHHFEKA 264

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P+       +      ++ + R+++   +    +       A++    +    ++G
Sbjct: 265 VALDPNFLDAYINLGNVLKESRIFDRSVSAYLRALALSPT----NAVVHGNLACVYYEQG 320

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
            +  +      +++L  N   A    A +L  + +   AE       K+ P H +  N  
Sbjct: 321 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALKLCPTHADSLNNL 380

Query: 300 THLL------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            ++        E T   LK      E           ++ +  + G + +A      A++
Sbjct: 381 ANIKREQGYIEEATGLYLKALEVFPEFAAAHSN----LASVLQQQGKLTEALNHYQEAIR 436

Query: 354 IAPR 357
           I P 
Sbjct: 437 IQPT 440



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + +       L +  T      +L       G ++ A     +A+++ P+ P     +  
Sbjct: 289 DRSVSAYLRALALSPTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 348

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   K         A  L   +    ++G +  +    +++L++ 
Sbjct: 349 ALKEKGQVVDAEECYNTALKLCPT----HADSLNNLANIKREQGYIEEATGLYLKALEVF 404

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A    ++  ++ P    A+ Y+++ +     ++    L
Sbjct: 405 PEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQPT--FADAYSNMGNTLKEMQDIQNAL 462

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A A    A+++ P 
Sbjct: 463 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALRLKPD 508



 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 354 GQVVDAEECYNTALKLCPTHADSLNNL--ANIKREQGYIEEATGLYLKALEVFPEF-AAA 410

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I P        +       ++   A+   ++  +
Sbjct: 411 HSNLASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQ 470

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +L+L  +   A    A  L
Sbjct: 471 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALRLKPDFPDAYCNLAHCL 520



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%)

Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +    AL + P        +            A     +  +   E+    A      
Sbjct: 359 AEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGLYLKALEVFPEF----AAAHSNL 414

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +     +G +  + +   E++++      A      +L      + A     +  ++NP 
Sbjct: 415 ASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQINPA 474

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               H  +A+I  H  S N    +        +  +  ++   ++
Sbjct: 475 FADAHSNLASI--HKDSGNIPEAIASYRTALRLKPDFPDAYCNLA 517


>gi|301058980|ref|ZP_07199949.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300446976|gb|EFK10772.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 824

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 21/238 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               DL  +     KA+  SP      E +   +    ++  A++   +  +        
Sbjct: 458 QAKKDLGGSLIAGKKAVQYSPFTVSAYENLGFIHFEMGQFHEAVSMYRKAIRIKP----G 513

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A L           G +  +      +LK+  N + A +  A+++ ++ +  +A     
Sbjct: 514 KAELYQDLGTVFLMHGQLDNAVSQFSRALKIRPNFVAAHLGLARAMGAKGRNEEAIAHFR 573

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-----IVSKI 334
           ++ K+NP       ++A ++     +        A+RL ++  E+ E  +      ++  
Sbjct: 574 EVLKINPGNLEAANDLAWVFA-TYPDAKFRNGPEAVRLAKMVCEATEYKLPLPLDTLAAA 632

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
             E G  D+A   A  A  +A       L A IE+       K       A  +  +P
Sbjct: 633 YAESGLFDKAQETAKKAGILAKSTGQERLWADIERRLQSYRSK------RAFCSPRNP 684


>gi|218550804|ref|YP_002384595.1| cellulose synthase subunit BcsC [Escherichia fergusonii ATCC 35469]
 gi|218358345|emb|CAQ90992.1| cellulose synthase subunit [Escherichia fergusonii ATCC 35469]
          Length = 1157

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 14/255 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++    I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ PE    Y 
Sbjct: 477 WGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536

Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351
             LS +   +  L     L   + N    E  + +    V + A  +    +      + 
Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAML 596

Query: 352 MKIAPRKEIFLLLAQ 366
            +  P   I L LA 
Sbjct: 597 RQQPPSSRIDLTLAD 611



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     +    +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692


>gi|302509640|ref|XP_003016780.1| hypothetical protein ARB_05073 [Arthroderma benhamiae CBS 112371]
 gi|291180350|gb|EFE36135.1| hypothetical protein ARB_05073 [Arthroderma benhamiae CBS 112371]
          Length = 938

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G++++ +R   +A   +
Sbjct: 579 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 637

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230
           P+   +  A V+      +  +A   L+  ++ A                 NR+ A+ L+
Sbjct: 638 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 697

Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            + L+                   G +  +        + C  S+   + A++       
Sbjct: 698 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 757

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     L +A  L     +E   S ++ S+
Sbjct: 758 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 815

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +  +      K+     +F+ +A+I        +K + W + A+ A  D
Sbjct: 816 SIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 873


>gi|260463350|ref|ZP_05811551.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259030940|gb|EEW32215.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 289

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 11/244 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A     ++ A E  E+ L          + L        DL  A+     +L   P
Sbjct: 15  RAVAAFNSGNHDQALELCELGLTQHPGDPALCHLLAAVLFAKADLLEARARIEASLAARP 74

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D         +       +  A+  L +  +       + A +L+ R+      GD  A+
Sbjct: 75  DNVPALILACRIARAEGRFEAALRQLERAAR-----LSSHAEILVERARTLDQAGDSSAA 129

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTH 301
                  L+    S  A+    +    +    +AE +LE+      HP    ++  +   
Sbjct: 130 GVSWTLVLQQDPKSEEAAARLGRLAWERGASLEAEALLERAVAGGGHPTAWFDLGLVRQD 189

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           L    +    +   R+ E++ ++ E+ V +  +  E G +D A A   LA  ++P     
Sbjct: 190 LRKFGSAA--QAYRRVLEMSPDAPEAAVNLGVVLQETGDLDGAMAAYSLAYGLSPSTFGV 247

Query: 362 LLLA 365
           + +A
Sbjct: 248 IAMA 251


>gi|254785517|ref|YP_003072946.1| tetratricopeptide repeat protein [Teredinibacter turnerae T7901]
 gi|237686027|gb|ACR13291.1| Conserved Hypothetical protein [Teredinibacter turnerae T7901]
          Length = 394

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 75/287 (26%), Gaps = 76/287 (26%)

Query: 39  TSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKAL---------- 88
            S  ++  +L+  L     L  +SR     P        KRNY  G   L          
Sbjct: 1   MSDPIVFVLLFAALAIGFSLGRLSRGPGRLPQQQSSSWLKRNYYVGLNQLLNDEPDAAVD 60

Query: 89  ---------YTGL---MSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
                       L   +++ A          A ++H  +  + +     L      Q+A 
Sbjct: 61  TFISSLEVNSETLETHLALGALLRRRGETARAIRVHQNLLARPSLPRPQL------QLAQ 114

Query: 132 AE--------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            E           + A    + +              Y E               KAL  
Sbjct: 115 LELGVDFLKAGLLDRAETLFKELADAK----------YTEKKVR----------EKAL-- 152

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-----KEWNRNRAILLIARSLENAD 238
                     +V+ Y    +W  AI   ++            W   +A      + +   
Sbjct: 153 --------IYLVELYRETSDWLDAIDVADRLTSRKFSSTADNWREMQAHFSCELAEKALA 204

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              ++ +      + +       A +  A+  ++      A  IL+K
Sbjct: 205 NNQVLEARRLLRNAQRFDKQCARAQLMQAQIELNDGAAAAALGILKK 251


>gi|221482020|gb|EEE20386.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii
           GT1]
          Length = 985

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 110/353 (31%), Gaps = 60/353 (16%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL  G ++ A        +     + +     + L   L    A  E ++    +  ++
Sbjct: 615 EALSRGSVATA--------RALYTCAIERLKTKKSLWLAL----ADLETKHGTTQDLEKL 662

Query: 146 MLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           + +     P      +  L  +    GD+ +A++   +A   + +   ++ A V+     
Sbjct: 663 LAKAVVCCPQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLEREN 721

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-- 259
            E++RA   L + + +          + + R + + D    IA   +A++S   C     
Sbjct: 722 HEFARARKILKRTRAHVNTQKVWIQSVQLERQVGDYDAA--IALCEEALKSHAECPKLWM 779

Query: 260 --------------------------------IMASICAAKSLISQNKKRKAEVILEKIW 287
                                           +   +CA      Q K   A  ILEK  
Sbjct: 780 IGGQLHREHPTKKDEEKAAEVFQRGTVVCCRSVPLWLCAVDCQREQGKWSVARAILEKAK 839

Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAH 345
             NP +PE+ +    +  E   G  + A  +      E   S ++ ++         Q H
Sbjct: 840 LRNPKNPELWHAAIRIEVE--AGNKQMAQHVASKAVQECPNSGLVWAEAIFLEEKSAQTH 897

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396
                  K      + L +A +         K   W   ++   A     W +
Sbjct: 898 KAVDALTKCENDVHLVLAVACLFWKEGK-ISKARKWLNRSVTLDASFGDAWAA 949


>gi|262197000|ref|YP_003268209.1| hypotheticalprotein [Haliangium ochraceum DSM 14365]
 gi|262080347|gb|ACY16316.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365]
          Length = 3936

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 56/170 (32%), Gaps = 4/170 (2%)

Query: 92   LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER--QYNIAHEKLEMMLQI 149
            + ++  H    AR     V    +  +   +  LE                 +   +   
Sbjct: 941  MAAVRLHEPERARAYQREVL-VLSPDDPEAMDALEELATQLSDWPDLLTVQRRRVALADA 999

Query: 150  PATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               +   ++ + + E  R+ DL++A       L + P++     A+ +      +W   +
Sbjct: 1000 DDAKIALLFKIAFVEEERLEDLDAAVATYESLLALVPESQRAMRALARLQEERGDWEGLV 1059

Query: 209  TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              L ++  ++ + +   A+L+    L   +      +     E+L +   
Sbjct: 1060 DALGRELSHSDDTDTKVALLMRIGGLYERNLERPSEALGAYCEALSVAPG 1109



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 89/315 (28%), Gaps = 45/315 (14%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATR 153
              +  A +    V        + L  L    I      +    + L    +        R
Sbjct: 3387 GELDAAVEAWREVLALDEGDRDALARL--AIIHEQRGDWYALIDILGQSARYAANSDEER 3444

Query: 154  EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             F       +S  + DL++A       LD++PDA     A+   +   ++W      + +
Sbjct: 3445 RFRSRIAQLQSDTLEDLDAAVEAWQSVLDVAPDAEDALTALEGIHTRREDWGAVQDTMAR 3504

Query: 214  KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +           A+L     L    +     +     ++L L D  +       + L   
Sbjct: 3505 RLDLLDAPADRVAVLHRLADLAADKRDANEDAIVYLFQALDLDDTHLPTYEKLDELLGKA 3564

Query: 274  NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------------------- 313
             +      +LE+          A +Y  L      G+ +R                    
Sbjct: 3565 ERWHDLVDLLERA---------AGVYARLAGMGAAGQPQRKEIDCLARAADIWEGPLANP 3615

Query: 314  ------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE----IFLL 363
                    ++       V +L  +SKI    G  D+       A+ + P       ++  
Sbjct: 3616 DAAAEILEKILAREPAYVPALTRLSKIYESAGDWDRCAEVLDRALALGPTGRDAAELYFR 3675

Query: 364  LAQIEQANSHNTDKI 378
            + ++ +  S +    
Sbjct: 3676 MGEVAREQSGDAAAA 3690



 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 64/226 (28%), Gaps = 8/226 (3%)

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             ++A     K L   P        + + Y  A +W R    L++             +  
Sbjct: 3615 PDAAAEILEKILAREPAYVPALTRLSKIYESAGDWDRCAEVLDRALALGPTGRDAAELYF 3674

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----K 285
                +     GD  A+     ++L    + + A      +            +L     +
Sbjct: 3675 RMGEVAREQSGDAAAAMSRWQQALASDPSYLPAIASIEAAAREAEDWPVVADMLTRRHNQ 3734

Query: 286  IWKVNPHPEIANIYTHLLSENTVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSID 342
            + K     E+A     +L +    + +       L    ++  E L  ++ +       D
Sbjct: 3735 VQKPAEQRELALALVDILRKKLGQRAQAIPLLEGLVSEGEDDPEVLRPLADLYCAAQQHD 3794

Query: 343  QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
            +A          A +      +A + +    +  +       AL A
Sbjct: 3795 RAVPIYERLADAAKKARQLRDVA-VYRQRLASILEARGQMDEALAA 3839



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 8/173 (4%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148
             L++ A  +      + +   ++ T      V     ++   E+ Y+      E  L   
Sbjct: 2928 ALLAYAPGHGGTRAALDALAQREETAERASAVL---ERLYEDEQNYDALAALYEQRLSMP 2984

Query: 149  --IPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
               P  R      L      R+GDL+ A      AL     +  V + + +       W 
Sbjct: 2985 TPNPERRFELYRMLAQVCEERLGDLDRAFEVWALALSEYSSSEEVQDHLERLAASRGAWE 3044

Query: 206  RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              +  L Q+     +     A  L   SL     GD+  +      +L +  +
Sbjct: 3045 DLVALLEQRLAELLDAELEYAYALKLASLYEDALGDLEGAAEKYRRALDVAAD 3097



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 75/219 (34%), Gaps = 15/219 (6%)

Query: 173  AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
            A+ Y  + L ++P+      A+V  Y   ++W+R +        +A + +    + L  R
Sbjct: 808  ARAY-ERVLAVAPEHLEAARALVPIYEATEKWARLLGTYEVLLGHAADDDERLDLELKIR 866

Query: 233  SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             L  A  G    ++  A  + +L            +     ++  +   IL+   +    
Sbjct: 867  DLCEARLGSKALAFQWAARAYRLAPGREDLRADLIRLGADADQWNEVAEILDARARDRAT 926

Query: 293  ---------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID- 342
                      E+  +    L E    +  +   L  ++ +  E++  + ++A ++     
Sbjct: 927  GTDEKLALLRELGRMAAVRLHEPERARAYQREVLV-LSPDDPEAMDALEELATQLSDWPD 985

Query: 343  ---QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
                   +  LA     +  +   +A +E+    + D  
Sbjct: 986  LLTVQRRRVALADADDAKIALLFKIAFVEEERLEDLDAA 1024


>gi|118088252|ref|XP_419586.2| PREDICTED: similar to tetratricopeptide repeat domain 13 [Gallus
           gallus]
          Length = 847

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 84/244 (34%), Gaps = 21/244 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A  +   MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 140 NGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVISLEPDH 199

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        S A++ L +  +        R+R  L         D       
Sbjct: 200 PEVFEQRAEILSPLGRISEALSDLTKAIQLQPSARLYRHRGTLYFIS----EDYATAHED 255

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYT 300
           +  ++E  K       A +    +   +   ++A    ++  K     ++ +  +   Y 
Sbjct: 256 FQHSLELNKNQPI---AMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYR 312

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            L + +     +   +   +N+  V++L +   +    GS+D+A       +++ P  E+
Sbjct: 313 ELGNFDAAT--ESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNEV 370

Query: 361 FLLL 364
              +
Sbjct: 371 CQYM 374


>gi|325128925|gb|EGC51779.1| hypothetical protein NMXN1568_0301 [Neisseria meningitidis N1568]
 gi|325130918|gb|EGC53647.1| hypothetical protein NMBOX9930304_0322 [Neisseria meningitidis
           OX99.30304]
 gi|325136914|gb|EGC59511.1| hypothetical protein NMBM0579_0312 [Neisseria meningitidis M0579]
 gi|325205416|gb|ADZ00869.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
          Length = 389

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   + QQ   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +   +      A+E+ K C            
Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 331 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|224062053|ref|XP_002300731.1| predicted protein [Populus trichocarpa]
 gi|222842457|gb|EEE80004.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 19/146 (13%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              RA+ L+  +L     G+  A+     E++ +  +   A    A +L +     KA  
Sbjct: 338 THFRALKLLGSAL--FGVGEYKAAVKALEEAIFMKPDFADAHCDLASALHAMGDDEKAIE 395

Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331
           + +K   + P H +    +  +Y  L      G+ +RA       L         + +  
Sbjct: 396 VFQKAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNR 448

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   L  G  ++A      A+K+  R
Sbjct: 449 AVSLLGAGETEEAKKALKEALKLTNR 474



 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 68/195 (34%), Gaps = 11/195 (5%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257
            ++  A        + A+        LL        +    +G ++++     E+  LC 
Sbjct: 278 GKYKEAKEEFLLALEAAEAGGNQWGYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCP 337

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
               A      +L    + + A   LE+   + P     H ++A+   H + ++    ++
Sbjct: 338 THFRALKLLGSALFGVGEYKAAVKALEEAIFMKPDFADAHCDLASA-LHAMGDDEKA-IE 395

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              +  ++    V++L  +  + +++G   +A       + + P      L   +    +
Sbjct: 396 VFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNRAVSLLGA 455

Query: 373 HNTDKILYWTQSALH 387
             T++     + AL 
Sbjct: 456 GETEEAKKALKEALK 470



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            +GD   A     KA+D+ P        +   Y+    + RA     +        N  R
Sbjct: 386 AMGDDEKAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWP--NHWR 443

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKL 255
           A L   R++     G+   +     E+LKL
Sbjct: 444 AQL--NRAVSLLGAGETEEAKKALKEALKL 471


>gi|326469564|gb|EGD93573.1| 20S cyclosome subunit BimA/Nuc2/Cdc27 [Trichophyton tonsurans CBS
           112818]
          Length = 801

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 70/198 (35%), Gaps = 15/198 (7%)

Query: 135 QYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            ++ A +      Q+     +   +     E     + + AQ     A+  +P       
Sbjct: 591 DHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYSAWY 648

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + Y    +    + F  +  + A   N    +L+ +  L    + ++ A+      +
Sbjct: 649 GLGKVYERMGK----LKFAERHLRTASNINPANVVLICSIGLVLERQNNLKAALLQYSRA 704

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLSENT 307
             L  +S++A +  A++L+  N+   A     +L+ +    P  H  +  +Y  +  +  
Sbjct: 705 SSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQDKGN 764

Query: 308 VGKLKRALRLEEINKESV 325
              +K       ++ ++ 
Sbjct: 765 A--IKHFTTALNLDPKAA 780


>gi|302853740|ref|XP_002958383.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
 gi|300256263|gb|EFJ40533.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
          Length = 1179

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 20/251 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             ++  A  +Y  A +  + +L    T       L   +   G    A RYA  ALD+  
Sbjct: 559 RARLMEASGEYKAAAQLYKDVLSEHGTYIDCYLRLACIARAKGSHKEALRYAQSALDVEG 618

Query: 186 DAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNR---NRAILLIARSLENAD 238
                   + Q ++  +++  A    I  L         + R       L  A      D
Sbjct: 619 GHADALALMSQLHMERRDYEAAGRTLIQLLQDDGSKRDVYGRIGYANTYLYTAPRDRRED 678

Query: 239 KGDMIASY-----HDAIESLKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEKIWK 288
                 +       +    L+    ++ A+       A    +   +   A + L   + 
Sbjct: 679 SAKKAEARFSKALDEYRSVLEADPRNVWAANGCGAALAELGYLDAAQV-YASMALSDGFL 737

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALR-LEEI-NKESVESLVIVSKIALEMGSIDQAHA 346
             P   I     HL   +    +      L+++ +K   + L+ +++   +   +++A +
Sbjct: 738 TIPDVLINLANVHLARCDYQDAVHLYRTALDKLEHKHHPQVLLYLARALYDSNKLNEAQS 797

Query: 347 KAMLAMKIAPR 357
               A+ +AP 
Sbjct: 798 CLKRAIHLAPT 808


>gi|296419827|ref|XP_002839493.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635654|emb|CAZ83684.1| unnamed protein product [Tuber melanosporum]
          Length = 521

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 75/255 (29%), Gaps = 43/255 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNS 172
           +F+      +      LA+   + A +  E  ++   T    +      + S    +  S
Sbjct: 25  SFNQPVQSLIESANALLAKGDMHGALDHFEAAIKKDPTNYLTIFKRGATYLSLGRSNQAS 84

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A       L + PD         +      +W+ A    + KK          A L  A 
Sbjct: 85  AD--FDAVLSLKPDFEAALLQRAKLKSRTGDWNAARR--DYKKAGGVTGKERIAELEEAE 140

Query: 233 -----SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                ++E   KGD  A    A  ++ +           A+  + + +  +A        
Sbjct: 141 RAVKTAMEAEKKGDYEACVTHAGTAIMVASGLHSLRSLRARCRLKRGEVHEAVG------ 194

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL-EMGSIDQAHA 346
                 ++ +                   L ++   +++  + ++ +    +   D+A A
Sbjct: 195 ------DLTH-------------------LVQLLPGNIDPHLQIANLLYFSVNDYDRAVA 229

Query: 347 KAMLAMKIAPRKEIF 361
           +    +   P  +  
Sbjct: 230 QLRKCLHSDPDSKPC 244


>gi|126659115|ref|ZP_01730255.1| hypothetical protein CY0110_04878 [Cyanothece sp. CCY0110]
 gi|126619643|gb|EAZ90372.1| hypothetical protein CY0110_04878 [Cyanothece sp. CCY0110]
          Length = 380

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 68/228 (29%), Gaps = 13/228 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
               N A       +Q+      +   L     R  D   A     + + + P+ P    
Sbjct: 140 TGDNNNAASAYYYAIQLNPQSVKSYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEAFA 199

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +    +  K+  +A+ +L    +        R +L  A       +G +         +
Sbjct: 200 IMGSSLLQQKQLDQAVQYLGNAVERFSGDVDLRLLLATAY----LQQGQLELGKEQLTRA 255

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYT-----HLLSEN 306
            +L  ++    +  A+    Q    +A  I  +  +     PE    Y       L   +
Sbjct: 256 ERLDPSNTKIQLKIARIYEVQENLDEALKIYRRISYLNRKSPE---AYAGVGRIQLAQND 312

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            +G +     L E+  ++ E    +     E     +A      A K+
Sbjct: 313 YLGAIITYKDLIELIPQNPEPYYYLGVAFKERQRTSEAKKALERAKKL 360



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 11/195 (5%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           YV   ++ RAI    Q        + + A +    +  ++ +G+  A+     ++L +  
Sbjct: 69  YVDKGDYQRAIATYEQA----ASLDNDNAKIFSGIAYLHSQQGNYQAAVKYYQQALSIDS 124

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLK 312
           ++         SL +      A        ++N  P+    Y  L       E+  G  +
Sbjct: 125 SNANFYYALGDSLANTGDNNNAASAYYYAIQLN--PQSVKSYIGLGVVLLRQEDYEGAAE 182

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              R+  ++  + E+  I+    L+   +DQA      A++         LL        
Sbjct: 183 AYKRVIALDPNNPEAFAIMGSSLLQQKQLDQAVQYLGNAVERFSGDVDLRLLLATAYLQQ 242

Query: 373 HNTDKILYWTQSALH 387
              +        A  
Sbjct: 243 GQLELGKEQLTRAER 257


>gi|26250164|ref|NP_756204.1| cellulose synthase subunit BcsC [Escherichia coli CFT073]
 gi|227883691|ref|ZP_04001496.1| cellulose synthase subunit BcsC [Escherichia coli 83972]
 gi|300971350|ref|ZP_07171419.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|301046599|ref|ZP_07193739.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|26110593|gb|AAN82778.1|AE016768_196 Cellulose synthase operon protein C [Escherichia coli CFT073]
 gi|227839271|gb|EEJ49737.1| cellulose synthase subunit BcsC [Escherichia coli 83972]
 gi|300301437|gb|EFJ57822.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|300411274|gb|EFJ94812.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|307555633|gb|ADN48408.1| cellulose synthase subunit [Escherichia coli ABU 83972]
 gi|315295429|gb|EFU54759.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1]
          Length = 1157

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDPAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273
            +                +L + +         +  E   +L ++ +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++      I            + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K   I   +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738


>gi|229587866|ref|YP_002869985.1| cellulose synthase operon protein C [Pseudomonas fluorescens SBW25]
 gi|22001533|sp|P58937|BCSC_PSEFS RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|18535635|gb|AAL71845.1| WssE [Pseudomonas fluorescens]
 gi|229359732|emb|CAY46581.1| cellulose synthase operon protein C precursor [Pseudomonas
           fluorescens SBW25]
          Length = 1279

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 108/344 (31%), Gaps = 66/344 (19%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE- 141
           K +KAL  G +  A     LA ++    +         ++   + + + AE     A   
Sbjct: 278 KAFKALDDGDLKTA--EPLLAARLAQKSNDVDALGGMGVLRQQQERYSEAENYLVQATRL 335

Query: 142 ----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
                 +  L     R + + S   ++ R G    A+    +A  ++P  P    A+   
Sbjct: 336 PGGAAWQSALND--VRYWNLISQSRDAQRAGRSAQARDLVAQAERLNPGQPGAAIALAGF 393

Query: 198 YVLAKEWSRA----ITFLNQ----------------------------------KKKNAK 219
                ++  A       L +                                  ++    
Sbjct: 394 QAQDNQFDDAEAGYRKVLARHPGDPDALSGLINVLSQSGQPDEALKLIDSVSPAQRAKFA 453

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              +  A+           +GD+ A+     ++L     +       A+  +   + R A
Sbjct: 454 PSVKINALRATQVGKLAEQRGDLKAAQAAYRQALDADPENPWTRFALARMYLRDGQIRNA 513

Query: 280 EVILEKIWKVNP-HPE--------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             +++ + K  P  P+         A +     +E T+G++  A R  ++N+ +  + + 
Sbjct: 514 RALIDGLLKSQPNQPDALYTSTLLSAQLSEWKQAEATLGRIPTAQRTADMNELA--TDIA 571

Query: 331 VSK---IALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQ 366
           + +   IA+E     Q      L  +  P      + + +L A 
Sbjct: 572 LHQQTDIAIETARRGQRPEALALLGRSEPLTRNKPERVAVLAAA 615



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 14/174 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRI-----GDLNS 172
            LL   + L   +Y+ A E L  +   P T     R   +  LY            DL +
Sbjct: 644 KLLYANVLLKANKYSEAGEILREVQGQPLTETGRQRYDDLIYLYRVKQADALREKNDLVA 703

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A    + AL   P+      A+ + Y  +    +A+       +      R    L +  
Sbjct: 704 AYDMLSPALAQRPNDALGVGALARMYAASGNGKKAMELYAPLIQQNPNNAR----LQLGL 759

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +       D   +   + ++L L   +      AA+      K  +A  +L K 
Sbjct: 760 ADIALKGNDRGLAQSASDKALALEPGNPEILTSAARIYQGLGKNSEAAELLRKA 813



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 26/218 (11%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             + + GDL +AQ    +ALD  P+ PW   A+ + Y+   +   A   ++   K+    
Sbjct: 468 KLAEQRGDLKAAQAAYRQALDADPENPWTRFALARMYLRDGQIRNARALIDGLLKSQPN- 526

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL-------ISQN 274
             +        S + ++     A+      + +  D + +A+  A             + 
Sbjct: 527 QPDALYTSTLLSAQLSEWKQAEATLGRIPTAQRTADMNELATDIALHQQTDIAIETARRG 586

Query: 275 KKRKAEVILEKIWKVNP----HPE----IANIYTHLLSENTVGKLKRALRLEEINKE-SV 325
           ++ +A  +L    +  P     PE    +A  Y  +        L    ++ E N   +V
Sbjct: 587 QRPEALALLG---RSEPLTRNKPERVAVLAAAYVEV--GAAQYGLDMMQKVVENNPNPTV 641

Query: 326 ESLVIVSKIALEMGSIDQA----HAKAMLAMKIAPRKE 359
           +  ++ + + L+     +A           +    R+ 
Sbjct: 642 DQKLLYANVLLKANKYSEAGEILREVQGQPLTETGRQR 679


>gi|310793643|gb|EFQ29104.1| PRP1 splicing factor [Glomerella graminicola M1.001]
          Length = 925

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 37/260 (14%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+    +A   +PD   +  A V+      E  RA   L + +  A 
Sbjct: 599 LAKEKWQAGEVDNARLVLARAFKSNPDNEDIWLAAVKLEAENGETERARKLLEEARDQAP 658

Query: 220 EWNRN--------------RAILLIARSLE---------------NADKGDMIASYHDAI 250
                               A+ L+ ++L+                 D G +  +     
Sbjct: 659 TDRVWMKSVVFERVLGNGDAALDLVQQALQYFPATAKLWMLKGQIYEDLGKVGQAREAYS 718

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309
             +K    S+   +  ++         KA  +L++     P  PE+      +  E   G
Sbjct: 719 TGVKAVPKSVPLWLLYSRLEEKAGLVVKARSVLDRARLAVPKSPELW--CESVRIERRAG 776

Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + +A  L     +E  +S ++ S+    LE  +  +  +      K+     +F+ +A+
Sbjct: 777 NVNQAKSLMAKALQEVPKSGLLWSEQIWHLEPRTQRKPRS-LEAIKKVDNDPILFVAVAR 835

Query: 367 IEQANSHNTDKILYWTQSAL 386
           I        +K   W + AL
Sbjct: 836 IFWGERK-LEKAQNWFEKAL 854



 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 82/232 (35%), Gaps = 14/232 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              G   +A+   + AL +  ++   W+  A +++             L Q  + A E  
Sbjct: 536 INRGMYETARAIYSYALRVFVNSRTLWMAAADLERN------HGTKESLAQVLEKAVEAC 589

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               +L +  + E    G++  +      + K   ++    + A K      +  +A  +
Sbjct: 590 PKSEVLWMMLAKEKWQAGEVDNARLVLARAFKSNPDNEDIWLAAVKLEAENGETERARKL 649

Query: 283 LEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           LE+     P   +     ++  +L       L    +  +    + +  ++  +I  ++G
Sbjct: 650 LEEARDQAPTDRVWMKSVVFERVLGNGDAA-LDLVQQALQYFPATAKLWMLKGQIYEDLG 708

Query: 340 SIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            + QA       +K  P    ++LL +++E+       K       A  A+P
Sbjct: 709 KVGQAREAYSTGVKAVPKSVPLWLLYSRLEEKAGL-VVKARSVLDRARLAVP 759


>gi|227354843|ref|ZP_03839260.1| cellulose biosynthesis protein C [Proteus mirabilis ATCC 29906]
 gi|227165161|gb|EEI49992.1| cellulose biosynthesis protein C [Proteus mirabilis ATCC 29906]
          Length = 1236

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 85/283 (30%), Gaps = 44/283 (15%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL       A    +  L + +    A+  L + + R GDL + Q+     L+ +  +  
Sbjct: 280 ALNTGNLKQATTYFKQALTVDSQDAQALAGLGYVALRSGDLATGQKL----LNQASQSGG 335

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                 +Q      +   +  + ++ K          +L +  S                
Sbjct: 336 EQGQKWKQQAEDAGFYSQLREVQRQAKQGNTQQALDKLLPLTHSSG-----------EKG 384

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306
           + +           +  A  L  Q     A  +L ++++ +   E    A  Y  +    
Sbjct: 385 LSAH----------LLQADLLRKQGNLPAAYQLLSELYQQHSQNEKVISAYYYLLIQQGK 434

Query: 307 TVGKLKRALRLEEINKESVESLVIV-----------SKIALEMGSIDQAHAKAMLAMKIA 355
                  A +L      S+   +             ++ ALE G   QA      A +  
Sbjct: 435 NSQ----AEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQARQLLTQAQRKN 490

Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
           P+   ++L LA++  A    T       Q       D  +I+ 
Sbjct: 491 PQNNWVYLDLARLMIAEGDKTQADQLILQLERRQTRDANYIAA 533



 Score = 43.4 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 79/218 (36%), Gaps = 25/218 (11%)

Query: 86  KALY-TGLMSIAAHNIPLARKMHSYVS----------QQHTFHNEYLVYLLEVQIALAER 134
           +AL   G +++ + ++   +K+ +  S          +Q      +   L EVQ    + 
Sbjct: 305 QALAGLGYVALRSGDLATGQKLLNQASQSGGEQGQKWKQQAEDAGFYSQLREVQRQAKQG 364

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFES---CRIGDLNSAQRYATKALDISPDAP 188
               A +KL     +P T       L     ++    + G+L +A +  ++         
Sbjct: 365 NTQQALDKL-----LPLTHSSGEKGLSAHLLQADLLRKQGNLPAAYQLLSELYQQHSQNE 419

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            V  A     +   + S+A   + ++    +     N + +  L   + +  + G    +
Sbjct: 420 KVISAYYYLLIQQGKNSQAEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQA 479

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                ++ +    +    +  A+ +I++  K +A+ ++
Sbjct: 480 RQLLTQAQRKNPQNNWVYLDLARLMIAEGDKTQADQLI 517


>gi|169625057|ref|XP_001805933.1| hypothetical protein SNOG_15795 [Phaeosphaeria nodorum SN15]
 gi|160705593|gb|EAT76890.2| hypothetical protein SNOG_15795 [Phaeosphaeria nodorum SN15]
          Length = 481

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 75/281 (26%), Gaps = 37/281 (13%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREFAVY-S 159
           A  +   +S      +  +  L++   + LA      A    +  + + P          
Sbjct: 15  AAPLTCALSAADIPADIPVSQLIKDASVKLASGDTQDALTYFDVAIARDPQNYLTFFRRG 74

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
                  +G    AQ    K L++ P          +      +W+ A        K  +
Sbjct: 75  --AAYLSLGRAQQAQHDFDKVLELKPGFEGALVQRAKIRARKADWAAARKDYEAAGKTDE 132

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
               + A      +    ++GD  A    A  +           I  A +     K R  
Sbjct: 133 IAQLDEAEGAAMLAQVAVNQGDWDACIQHAGTA-----------IMVAGTAYDIRKTR-- 179

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEM 338
                                       V  +     L +INK  +E  +   +     +
Sbjct: 180 ------------------ARCRFEKGEVVEGISDLQHLLQINKGDIEPHLQSSAMAFYSL 221

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           G  ++        ++  P  ++ + L + E+       K+ 
Sbjct: 222 GETEKGIKHIAQCLQSDPDSKVCMKLRRREKNLEKTLKKVR 262


>gi|108757417|ref|YP_633022.1| adventurous gliding motility protein AgmK [Myxococcus xanthus DK
           1622]
 gi|108461297|gb|ABF86482.1| adventurous gliding motility protein AgmK [Myxococcus xanthus DK
           1622]
          Length = 3822

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 8/185 (4%)

Query: 99  NIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154
           +   A K+   + +           + L+E     +   +  A E++E M       T +
Sbjct: 9   DPGAAAKVKEALDRCFLLWPGMPEGLSLIEKLTLRSGGDFAPAIEQIEAMAGEVKDRTAQ 68

Query: 155 FAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             +           R+ D + A     KA+   P          +Q +       A+  L
Sbjct: 69  VDLWLRVGTLRLG-RMNDADGALAAFEKAVAADPSRADAASLAAEQLLEKGRAPEAVAVL 127

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +     K+ +    + L    L      D  A+      +LKL     +A+   A+ L 
Sbjct: 128 ERYLGTVKDRSTQAGMRLRLADLFLTQLKDADAAREHLEAALKLDPTQALAAFQLARLLA 187

Query: 272 SQNKK 276
             ++ 
Sbjct: 188 EDDEL 192



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 94   SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
            +  A +      +H+  +      N      +  + A    Q   A E    + +I    
Sbjct: 2911 AALAVDAECRPALHALGTMYERSGNWPFALEMLSKEAELAGQSKDAVELYYRLGKINEDM 2970

Query: 154  EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                           D  SA+    +AL + P       A+       K+WS     L Q
Sbjct: 2971 LM-------------DTGSARTAYQQALAVDPGHLPSIRALKGIQEQEKDWSGYEQTLRQ 3017

Query: 214  KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            + +  ++       LL         + D   +     E+LK   +S+ A+   +   I+ 
Sbjct: 3018 EAEQTEDPAAKGRALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAH 3077

Query: 274  NKKRKAEVIL 283
                  E +L
Sbjct: 3078 EDWASGERML 3087



 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 35/322 (10%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            +   AR  +         H   +  L  +Q    E+ ++   + L    +          
Sbjct: 2973 DTGSARTAYQQALAVDPGHLPSIRALKGIQ--EQEKDWSGYEQTLRQEAEQTEDPAAKGR 3030

Query: 159  SLYF----ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFL 211
            +L       +    D ++A  Y  +AL   PD+      +   Y+  ++W+     +  +
Sbjct: 3031 ALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAHEDWASGERMLDIV 3090

Query: 212  NQKKKNAKEWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASIC 265
             +K       +++          + R    A+K G    +     ++ +L    + A   
Sbjct: 3091 TRKMAEMAVADKDSVSAADLCRQLYRLGYVAEKLGKRDKALGCYEKAYELDATYLPALEG 3150

Query: 266  AAKSLISQNKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLK 312
                L+   +   A  + + I  +  H E             + +I+  L   +      
Sbjct: 3151 YGNLLVQTRRYEGALKVFQTI--LIHHREELTDLEVVEVYWQLGDIHAALNQTDRAQ--N 3206

Query: 313  RALRLEEINKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQ 369
               +   I+     +L  +  +  + G  +++     + +  ++   R ++ L L +I +
Sbjct: 3207 HFEKALAIDPGHEPTLRALVALLEKQGQYEKSAELRQQLVGVLEGEARAKVCLELGRIAR 3266

Query: 370  ANSHNTDKILYWTQSALHAMPD 391
               H+    +    +AL + PD
Sbjct: 3267 DELHDPYMAIDAFTNALKSQPD 3288



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 4/152 (2%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLY-FESCRIGDLNSAQRYATKALDI 183
           Q A      +   E +  + +       R   +  L   +  ++ D   A +     L I
Sbjct: 848 QAAEDADSLDSYAEIIAELAEEGDVGSARLALLRELAEVQEKKLDDKAGAVKALRDLLAI 907

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P       A+ + +   +EW+     L +    + E     A L  A  L      D  
Sbjct: 908 EPGNLDCLRALQRLHRAGEEWAALAEVLEKLAAASPEPAEQLAFLREAALLHETKLMDKE 967

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           ++        +    S  A+    +      +
Sbjct: 968 SAADAWRVIAERDPASREAAATLDRLYTESGR 999


>gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293]
 gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 820

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 35/250 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              ++  Y  A  + +  L+        + +L     + G L  A+R     + I+P + 
Sbjct: 182 SLESQGDYEAAIREYKRSLKSRPGWPSGINNLGVALQKAGKLEEAERMFRDLVRIAPGSV 241

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   A     +    + +    +A L ++      +  +       
Sbjct: 242 KGNNNLGTVLAEQGKAEEAERCYRKAL--SLDAGYGKAALNLSSLKRETESPEEALKSIQ 299

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           A+ +     + +   +   ++ I   K  KA VIL       P                 
Sbjct: 300 ALAAE--FPDDVALQLRFVQAYIDAGKVHKAGVIL------AP----------------- 334

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
                   L + + ++ E+  ++ +I  + G  + A     LA+K  P      L     
Sbjct: 335 --------LLKNDPDNGEAHCLMGRIRRQQGKKELAEQHFKLALKKDPPAIEAWLHLAYM 386

Query: 369 QANSHNTDKI 378
             +    ++ 
Sbjct: 387 AKDGGEVEQA 396



 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 81/277 (29%), Gaps = 34/277 (12%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD---ISPDAPWVTE 192
           Y+ A       + +  +  FA  +L          + A     + L      P   +   
Sbjct: 121 YDEAIRYYRNAISLNPSFSFAYNNLGTIYESQDQTDRAITTYEEGLQYDTNHPTLRYNLG 180

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             ++      ++  AI    +  K+   W     I  +  +L+ A  G +  +     + 
Sbjct: 181 ISLESQ---GDYEAAIREYKRSLKSRPGWPS--GINNLGVALQKA--GKLEEAERMFRDL 233

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEV------ILEKIWKVNPHPEIANIYTHLLSEN 306
           +++   S+  +      L  Q K  +AE        L+  +       +        +E+
Sbjct: 234 VRIAPGSVKGNNNLGTVLAEQGKAEEAERCYRKALSLDAGYGKA---ALNLSSLKRETES 290

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLA 365
               LK    L     + V   +   +  ++ G + +A       +K  P       L+ 
Sbjct: 291 PEEALKSIQALAAEFPDDVALQLRFVQAYIDAGKVHKAGVILAPLLKNDPDNGEAHCLMG 350

Query: 366 QIEQANS--------------HNTDKILYWTQSALHA 388
           +I +                  +   I  W   A  A
Sbjct: 351 RIRRQQGKKELAEQHFKLALKKDPPAIEAWLHLAYMA 387


>gi|186684862|ref|YP_001868058.1| hypothetical protein Npun_F4764 [Nostoc punctiforme PCC 73102]
 gi|186467314|gb|ACC83115.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 630

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 67/228 (29%), Gaps = 37/228 (16%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEA 193
            Y  A    +  LQ   T    VY     + R  GD   A   + + L ++P        
Sbjct: 323 DYEGAIADYDRALQENPT-LALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCD 381

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    +   AI   ++  +         A     R +      D+  +  D  +++
Sbjct: 382 RAAARRSLGDHKGAIKDYDRALQIND----QLAAAYYGRGIAREALKDLQGAIDDNTQAI 437

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L           +++  ++   R+                       LL +        
Sbjct: 438 ELVPEF-------SQAYCNRGNTRR-----------------------LLGDEQGAIADY 467

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              L +IN + +E+          + + + A A    A++I P+   F
Sbjct: 468 NQAL-KINPDLIEAYYNRGSTHYALEAYESAIADYTQALQINPQSAAF 514


>gi|242035181|ref|XP_002464985.1| hypothetical protein SORBIDRAFT_01g029925 [Sorghum bicolor]
 gi|241918839|gb|EER91983.1| hypothetical protein SORBIDRAFT_01g029925 [Sorghum bicolor]
          Length = 1195

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 77/273 (28%), Gaps = 42/273 (15%)

Query: 98  HNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA 151
            +   ARK+ +       +      N+ + +               A +     +   P 
Sbjct: 45  GDGEEARKLRAAASEHFLAAAKLNPNDGVPFRFLGHHYAHGGDNQRAAKCYQRAVTLNPD 104

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             E    +L       G  +       +A   SP A W    +    V  ++WS AI  L
Sbjct: 105 DAEAG-ETLCDLLDVEGKESLELAVCKEAAGKSPRAFWAFRRLGYLQVHQRKWSEAIQSL 163

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
               +         A L  A  L     G   A+      +++L  + + A I +    +
Sbjct: 164 QNAIRGYPT----CADLWEALGLAYHRLGMFTAAVKSYGRAIELDSSRVFALIESGNIQL 219

Query: 272 SQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
                RK         ++ P  H    + Y  L S                      +L+
Sbjct: 220 MLGYFRKGVEQFRSALEMAPCNH----SAYFGLAS----------------------ALL 253

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             ++  + +G+   A +    A +      I  
Sbjct: 254 AWARNCITIGAFGWAASLLKEASEA---SRICT 283


>gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium
           castaneum]
 gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum]
          Length = 1187

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 103/332 (31%), Gaps = 34/332 (10%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +   +    V L      +       A    E  L
Sbjct: 166 LGKACIAYNKKDFRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQ---RYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           Q+      A+  L      +    S +   +  +KA  I    P V   +   +   K++
Sbjct: 225 QLDPQCVGALVGLAILKLNLQQPESIRSGVQMLSKAYTIDSSNPMVLNHLANHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263
           S+ +  L     +  E    RA      +     +GD   ++    ++ +      ++  
Sbjct: 285 SK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPTAFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317
               +  I +     A    EK+ K  P        + ++Y +  S++     K    ++
Sbjct: 344 FGLGQMYIYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLKKV 403

Query: 318 EEINKESVESLVIVSKIALEMGS-------IDQAHAKAMLAMKIA-PRKEI-------FL 362
            E   + +E+ + +++I LE             A       ++   P + +       + 
Sbjct: 404 TEQFPDDIEAWIELAQI-LEQSDLQGSLNAYGTAIQILNKDVQADIPTEILNNVGALHYR 462

Query: 363 LLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393
           L   +E+A  +  +        A   A  DP 
Sbjct: 463 L-NNLEEAKKNLEEA----LTRAKTEAEHDPQ 489



 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 44/276 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +    +  Y+ A +      Q   T      + L       GD  +A +   K L   P
Sbjct: 312 ARAFHVQGDYDQAFQYYYQATQFAPTAFVLPHFGLGQMYIYRGDAENAAQCFEKVLKAQP 371

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMI 243
                 + +   Y  +   S+         K    +  +   A + +A+ LE +D    +
Sbjct: 372 GNYETMKILGSLYANSSSQSK-RDIAKNHLKKVTEQFPDDIEAWIELAQILEQSDLQGSL 430

Query: 244 ASYHDAIES-LKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
            +Y  AI+   K     I   I           N   +A+  LE+               
Sbjct: 431 NAYGTAIQILNKDVQADIPTEILNNVGALHYRLNNLEEAKKNLEEA-------------- 476

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVI-----VSKIALEMGSIDQAHAKAMLAMKIA 355
                     L RA    E + +   S+ +     ++++   +   D++       +K  
Sbjct: 477 ----------LTRAKTEAEHDPQYYNSISVTITYNLARLNEALCLFDKSEKLYKDILKER 526

Query: 356 PRKEIFLL----LAQIEQANSHNTDKILYWTQSALH 387
           P      L    +A+    +  +  +   W + AL 
Sbjct: 527 PNYVDCYLRLGCMAR----DKGHIYEASDWFKEALR 558


>gi|168016027|ref|XP_001760551.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688248|gb|EDQ74626.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 503

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 14/272 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A +  +       T   A +       R G+   A+    K L       ++ + 
Sbjct: 105 GNTGKARKLFDAATAADRTHPAAWHGWAVLELREGNTKKARALLKKGLKFHGPNEYLLQT 164

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +    V    + +A     +  ++  +     A   +A +L  A +     + +     +
Sbjct: 165 LALLDVKMGRYDQARILFGKATRSNPKS----AASWLAWALMEASQERKTTARNLFKNGI 220

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLK 312
           +    +       A     +  K +A  + ++  ++NP  P I   Y     +     + 
Sbjct: 221 EASPKNRYVWQAWALFEAKEGNKERARQLFQRGQQLNPLDPVIYQSYGLFEYDCGHIAIA 280

Query: 313 R--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK----EIFLLLAQ 366
           +    R   +  +   + +  + +  + G++D A      A+ + PR       F     
Sbjct: 281 KQLFKRGVSVGPQHQPAWIAWAWVEWKEGNLDAARELFQRAIAVDPRSMDAVRAFQAWGI 340

Query: 367 IEQANSHNTDKILYWTQSALHAMPD--PLWIS 396
           +E     N        + AL       P W+S
Sbjct: 341 LEDRE-GNVGVARVLFKRALRVDSQNVPTWMS 371


>gi|302037836|ref|YP_003798158.1| hypothetical protein NIDE2523 [Candidatus Nitrospira defluvii]
 gi|300605900|emb|CBK42233.1| conserved protein of unknown function, contains TPR repeats
           [Candidatus Nitrospira defluvii]
          Length = 567

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 42/294 (14%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           R+    +  +     +    LL E Q+     + + A      +L+    +  A++ L  
Sbjct: 6   RRRDEKLHGRQAGGADVSTALLREAQLHHQAGRLDEAERAYRSLLERAPAQPDALHGLGL 65

Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--W---------VTEAV--VQQYVLAKEWS---- 205
            + R G+L  A  +  KA    P  P  W             V  V+ Y  A +W+    
Sbjct: 66  LTYRRGNLKDALGWLAKACAAGPRNPVYWFNHGVVLQRAGRTVDAVEAYGQAIQWNPRYI 125

Query: 206 RAITFLNQKKKN-AKEWNRNRAI------------LLIARSLENADKGDMIASYHDAIES 252
            A T L    K   +  +   A                   +   ++G +  +      +
Sbjct: 126 EARTNLGNAYKELGRLADAQAAYEQVLTLNPDHAEAHNNLGVVLKEQGRLDEAAESYRRA 185

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307
           + L  +   A       L+ Q +   A    E+  ++ P        +   +  +  E+ 
Sbjct: 186 IALKPSHAEAQNNLGLVLLEQGRLDDAIRCFERALQIVPGYGTALYNLGIAW--IWREDM 243

Query: 308 VGKLKRALRLEEINKES----VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              L+      +          E+ V  S++  +   +    A  +L  +  P 
Sbjct: 244 PRALRCFAETAQAKHAHGRPVTETAVFRSRLKHDAEQLQYLRACGLLGDEWNPY 297


>gi|149926302|ref|ZP_01914564.1| cellulose synthase operon protein C [Limnobacter sp. MED105]
 gi|149825120|gb|EDM84332.1| cellulose synthase operon protein C [Limnobacter sp. MED105]
          Length = 1322

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 78/235 (33%), Gaps = 27/235 (11%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K++  + Q++  + +  V L+      A  + + A   ++ M   P +    V 
Sbjct: 407 DFQTAEKLYRALLQKNPNNADARVGLVL--TLSASGRADEAQRLIDSM---PESMVTGVG 461

Query: 159 SL--YFES---------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            L     +          R+G+  +A++Y    +  +P  PW    + + Y        A
Sbjct: 462 GLDKLRSAIAYENGKRELRLGNEAAARQYFEDTVAFNPAYPWARVELARLYHAQGRKDEA 521

Query: 208 ITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASY--HDAIESLKLCDNSIM--- 261
              ++     +        A  +    + +      + +    D + + +L         
Sbjct: 522 RALIDPLTSIDNVPEESLYAAAVFYSEIGDNAGAAAVLARIPKDELTTDQLALTQRTEFR 581

Query: 262 ASICAAKSLISQNKKRKAEVILEK-IWKVNPHPE----IANIYTHLLSENTVGKL 311
           A +  A +L    +K  A+ +L          P+    +A+ Y      +   +L
Sbjct: 582 AVLDQAATLNKLGRKSDAQRLLSSLERDAADKPDLMLQLASEYAEGGDIDNATRL 636


>gi|124024786|ref|YP_001013902.1| hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
           NATL1A]
 gi|123959854|gb|ABM74637.1| Hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
           NATL1A]
          Length = 816

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 94/269 (34%), Gaps = 19/269 (7%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           A  NI  A K + Y   Q       L     +L+            A       +++   
Sbjct: 56  AQGNIQKAAKYYQYFIDQGFKDPRVLANYGVILKG-----FGNSQEAELLYRKAIELNPN 110

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A Y+L      +G L  A+    KA++ISP+       +     +  +    +    
Sbjct: 111 FADAHYNLGNTLRDLGKLKEAELSYRKAIEISPNY---ANTLYNLGTILSD-LGKLQDAE 166

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              + A   N N             D G +  +     +++K+  N           L  
Sbjct: 167 FSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIKISPNYAKVHCNLGTILRD 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRAL----RLEEINKESVES 327
             K + AE+   K  ++N  P+ A  Y++L +  + +G LK A     +  E+  +  E+
Sbjct: 227 LGKLKDAELYTRKAIQLN--PDFAEAYSNLGNILSDLGNLKEAEISQKKTIELKPDCAEA 284

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +  I  ++G +  A      A++I+P
Sbjct: 285 HSNLGNILRDLGKLKDAELSYRKAIEISP 313


>gi|113476446|ref|YP_722507.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110167494|gb|ABG52034.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 681

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 93/247 (37%), Gaps = 23/247 (9%)

Query: 127 VQIALAERQYNIAHEK-LEMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDIS 184
            + +LA+ + + A+   L+ +   P      A  ++       GD+ +A+ Y  KA+ I 
Sbjct: 18  AESSLAQGKLDEAYAACLKALNSQPE--FAPAYKTIGNILQVKGDIEAAKNYYFKAITIF 75

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           PD       +   Y   ++W +A  F  QK  + K    N AI+    +           
Sbjct: 76  PDFAEAHANIGSMYAKQRDWEKAF-FYYQKAIHIKP---NLAIVYRNLAKVCECTEKEEL 131

Query: 245 SYHDAIESLKLCDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           +     ++L L   S  A       K L+  NK   A        K+N  P ++  Y +L
Sbjct: 132 ATEYTYKALILEPESATAIEHLNIGKKLLELNKIEAAIKCYRNAVKIN--PNLSAGYQNL 189

Query: 303 LS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                     E+ +  L+  ++++  N        ++ ++  + G    A +    A+++
Sbjct: 190 GELLVKNGELESALIALREGIKIDAKNPRCY---YLLGEVWQKQGQYKLAISDYSRAIEL 246

Query: 355 APRKEIF 361
            P   +F
Sbjct: 247 KPENHLF 253



 Score = 43.4 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 67/203 (33%), Gaps = 24/203 (11%)

Query: 65  FLSCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                A +    +    +     GY+ L  G + +    +  A  +      +    N  
Sbjct: 162 LNKIEAAIKCYRNAVKINPNLSAGYQNL--GELLVKNGELESAL-IALREGIKIDAKNPR 218

Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESC-----RIGDLNSAQ 174
             YLL  ++   + QY +A       +   P         L+ +       ++G L+ A 
Sbjct: 219 CYYLL-GEVWQKQGQYKLAISDYSRAIELKPEN------HLFHKKLGDVWEKMGKLDVAI 271

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               KA++I+P+  W   ++   Y   ++W +AI   ++       ++          + 
Sbjct: 272 SCYEKAIEINPNFFWSYHSLGNVYTKQQKWDKAIAAYDKATIINPNFSN----TYYNLAD 327

Query: 235 ENADKGDMIASYHDAIESLKLCD 257
                     +    +E+++L  
Sbjct: 328 AFLHNSQKEEAIITYLEAIRLRP 350


>gi|325499086|gb|EGC96945.1| cellulose synthase subunit BcsC [Escherichia fergusonii ECD227]
          Length = 1157

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 16/256 (6%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416

Query: 186 DAPWVTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                   +   Y       A+ +  +++   ++  +  E +     L   ++    ++G
Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSVSQRRSIDDIERSLQNDRLA-QQAEALENQG 475

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299
               +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ PE    Y
Sbjct: 476 KWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAY 535

Query: 300 THLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAML 350
              LS +   +  L     L   + N    E  + +    V + A  +    +      +
Sbjct: 536 GLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAM 595

Query: 351 AMKIAPRKEIFLLLAQ 366
             +  P   I L LA 
Sbjct: 596 LRQQPPSSRIDLTLAD 611



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415


>gi|313230744|emb|CBY08142.1| unnamed protein product [Oikopleura dioica]
          Length = 885

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 98/292 (33%), Gaps = 39/292 (13%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNI----AHEKLEMMLQIPATRE 154
              A K++         +   LV L    Q        +     A +  E  L+I  T E
Sbjct: 611 YEEAIKVYEQAIALEPLNPNPLVNLAWVKQTLGISSGSSRMVRDAEQLYEQSLRIKPTSE 670

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFL 211
             +  L     + G+ + A     +A  + P        V++Q    V A E  RA+  L
Sbjct: 671 AFMR-LGSLKYQRGETSEANLEYEEARKLDP---ENHMIVLEQSIVLVSAGETERALEIL 726

Query: 212 NQKKKNAKEWNRNRAILLIA-----RSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                  K+       + +A     R  +      ++ + H  IE  K  D        A
Sbjct: 727 QVAVSKDKDCKLANLHITLAKIYGPRKHQFMKAASVLENCHREIEENKHEDE------IA 780

Query: 267 AKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A              R  + +       NP       +     + T+  L+ A++L    
Sbjct: 781 ADIKFQLGAMYHEIVRNNQNV------SNPTKN-EEAFLAKAKQKTLELLQEAIKL---K 830

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANS 372
              VE  V+++++ L  G++          +K+ P  E+  +L  ++++A S
Sbjct: 831 PGDVEYRVLLAQVHLRSGNLKDGTHVLKTILKLKPDHEVATILLNRVKEAES 882


>gi|325110736|ref|YP_004271804.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM
           5305]
 gi|324971004|gb|ADY61782.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM
           5305]
          Length = 526

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 5/136 (3%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL-YFESCRIG-DLNSAQR 175
             +V+ +    A        A    +    +        + +L    + +   DL+ A  
Sbjct: 379 PEMVHFVLGSAAYRRSDLKAAERHWDLAFAKSGKLTPLLLNNLAMVYAEQAEPDLDHALE 438

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            A +A+++ P      +   Q +    +W  AI  L+ +       NR + + L+A++ E
Sbjct: 439 LANQAVEVVPQLAEFRDTRGQIHAKRGDWKSAI--LDLQIVVRHFPNRKQVLELLAKAYE 496

Query: 236 NADKGDMIASYHDAIE 251
                D+ A+Y   +E
Sbjct: 497 ELGDNDVAAAYRRRVE 512


>gi|171057178|ref|YP_001789527.1| TPR repeat-containing protein [Leptothrix cholodnii SP-6]
 gi|170774623|gb|ACB32762.1| Tetratricopeptide TPR_2 repeat protein [Leptothrix cholodnii SP-6]
          Length = 566

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 10/236 (4%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             ++ R  +  SA     KAL I P      E +    +       A   L    K   +
Sbjct: 5   LLQAGRHDEAESAY---RKALQIKPLHARAQEGLGLVLLRIGRLEEAFLHLEAAHKVEPD 61

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                A +L    L + + G++  +      +++    +  A        + Q +   + 
Sbjct: 62  ----NAEILTHWGLVDLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSI 117

Query: 281 VILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            +L K  ++ P   +A          +E     L  A +  E   ++    V+++ + + 
Sbjct: 118 ELLRKAIEIRPQHGLAYSNLAMALRRAERLDDALDAARKATEYKADNARVWVVLADVQMN 177

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
           +G  D A      A  I P+     +      A + +  +       AL   PD  
Sbjct: 178 LGDFDAAGQSLERATAIDPQHVGTFVGLGKRHAATGDPTRSREAYTRALQLNPDSA 233



 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 54/165 (32%), Gaps = 6/165 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A  K    ++       A ++L   + + G ++++     KA++I P        
Sbjct: 77  GNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSIELLRKAIEIRPQHGLAYSN 136

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +      A+    A+    +  +   +  R   +L    +    + GD  A+      + 
Sbjct: 137 LAMALRRAERLDDALDAARKATEYKADNARVWVVL----ADVQMNLGDFDAAGQSLERAT 192

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
            +    +   +   K   +     ++     +  ++N  P+ A+ 
Sbjct: 193 AIDPQHVGTFVGLGKRHAATGDPTRSREAYTRALQLN--PDSADA 235



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 91  GLMSIAAHN-IPLARKMHSYVSQQ----HTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           GL+ +   N    A K H  + +     H +HN  LV       AL + Q + + E L  
Sbjct: 70  GLVDLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLV-------ALKQGQVDTSIELLRK 122

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            ++I      A  +L     R   L+ A   A KA +   D   V   +    +   ++ 
Sbjct: 123 AIEIRPQHGLAYSNLAMALRRAERLDDALDAARKATEYKADNARVWVVLADVQMNLGDFD 182

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            A   L +                +     +A  GD   S      +L+L  +S  A
Sbjct: 183 AAGQSLERATAIDP----QHVGTFVGLGKRHAATGDPTRSREAYTRALQLNPDSADA 235


>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 1270

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 96/312 (30%), Gaps = 49/312 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAP--- 188
                A      +++       A     +     ++ DL  A    T+AL + P      
Sbjct: 444 GDAQGAAADFSEVIKRDPQDGEAYFNRGVAR--VQLSDLQGAVEDYTQALQLDPRHGKAY 501

Query: 189 ----WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKGDMI 243
                  +A+       +++S+A++  + +     E     +A L + R++       + 
Sbjct: 502 YHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMAYLSSNTLE 561

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +  D  ++L+L  N        +++ + +   R+                         
Sbjct: 562 PALADCEQALRLDPNL-------SRAYLCRGLARQGL----------------------- 591

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFL 362
             +  G L    R  E++ +  ++ +      L++G+I+ A +    A+ + P     + 
Sbjct: 592 -GDPGGALADFNRALELDPQMAKAYLNRGIAHLDLGNIEAALSDLNQAIALDPQDASAYS 650

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYFE 419
              +I          +  +T +      +P    + G L +    W         +   +
Sbjct: 651 SRGRIHWLLGDPLAALRDYTAALERDPQNPQLYFNRGQLHAEREDWPAACEDFSQV--LQ 708

Query: 420 WKIPTKSPEYIS 431
           W      P    
Sbjct: 709 WAARPGIPRGPE 720



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 95/297 (31%), Gaps = 26/297 (8%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             G +     +   A + ++   ++        +Y    Q+      +  A E    +LQ
Sbjct: 651 SRGRIHWLLGDPLAALRDYTAALERD--PQNPQLYFNRGQLHAEREDWPAACEDFSQVLQ 708

Query: 149 ------IPATREFAV-----YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
                 IP   E  +       +  +  R+GD   A     +AL   P +        Q 
Sbjct: 709 WAARPGIPRGPELLLNAHLRRGMARQ--RLGDWQGALADFDQALQGDPQSGLAYFHRGQV 766

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                +   AI   +Q                +AR+      GD+ A+     E+++L  
Sbjct: 767 RAALGDGLGAIQDYHQALALGVAVAEADIRRDLARA--QIQTGDLQAALEQLNEAVRLQP 824

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKR 313
                    A+      +  +A    +++ + +P  +    +     H    N    ++ 
Sbjct: 825 ERRDLRQERAELCRQLGRWPEAIADYDEVLRQDPQ-DWTAWLGRGMAHGQVGNWDSAIQD 883

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
             R+ + + +  E+L    +   ++G  + A       ++  P+      +A++ + 
Sbjct: 884 LSRVLQQDPDHREALWHRGQALQQLGQTEAALQDLNRLLQRDPQHR----MARLARG 936



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 51/167 (30%), Gaps = 11/167 (6%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQ-----IPA---TREFAVYSLYFESCRIGDLNSA 173
             +L   Q+         A    + +L+      P    T       L  +    GDL  A
Sbjct: 998  AHLKRAQVRRLRHNLEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQ--ERGDLAGA 1055

Query: 174  QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                T  +   P A          ++   +   A+  L+Q     ++W    A L   + 
Sbjct: 1056 LADFTALIQQQPQASQAFALRATVHLALGDQEMALADLDQALSLDRDWGVANAALAYRQR 1115

Query: 234  LENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             +   + +    +  D  ++L L      A +  A     + +  KA
Sbjct: 1116 GDLHRQANCPELAIADYTQALALNPQEHSALLHRALLWDGEGQTDKA 1162



 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 56/198 (28%), Gaps = 16/198 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G+      +   A  +  +           L Y    Q+  A      A +     L
Sbjct: 727 LRRGMARQRLGDWQGA--LADFDQALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQAL 784

Query: 148 Q------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
                      R      L     + GDL +A     +A+ + P+   + +   +     
Sbjct: 785 ALGVAVAEADIR----RDLARAQIQTGDLQAALEQLNEAVRLQPERRDLRQERAELCRQL 840

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             W  AI   ++  +             + R + +   G+  ++  D    L+   +   
Sbjct: 841 GRWPEAIADYDEVLRQDP----QDWTAWLGRGMAHGQVGNWDSAIQDLSRVLQQDPDHRE 896

Query: 262 ASICAAKSLISQNKKRKA 279
           A     ++L    +   A
Sbjct: 897 ALWHRGQALQQLGQTEAA 914


>gi|317048291|ref|YP_004115939.1| tetratricopeptide repeat-containing protein [Pantoea sp. At-9b]
 gi|316949908|gb|ADU69383.1| tetratricopeptide repeat protein [Pantoea sp. At-9b]
          Length = 389

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 79/254 (31%), Gaps = 37/254 (14%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  AV  L  +    G  + A+             IS
Sbjct: 83  GEVDRAIRIHQSLMESASLSYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLVDETDFRIS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W +AI    +  K  K+  +   A      +L+     D+ 
Sbjct: 143 -----ALQQLLLIHQATSDWQQAIEVAEKLVKLGKDKQKGEIAHFYCELALQALSSDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297
            +     +       S   SI   +  + Q +  KA    + +LE  K       P +  
Sbjct: 198 RAMTLLKKGEAADRQSARVSIMTGRIFMEQGEYTKAVERLQRVLEQDKELVSEALPMLET 257

Query: 298 IYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLA 351
            Y  L   E     L+R +          E+   V+++ L          + A       
Sbjct: 258 CYQRLNQPEQWAQFLQRCV---------DENTGAVAELYLADILEQQQGPEAAQLYINRQ 308

Query: 352 MKIAPRKEIF-LLL 364
           ++  P   +F  L+
Sbjct: 309 LQRHPTMRVFHRLM 322


>gi|224002959|ref|XP_002291151.1| RNA splicing factor [Thalassiosira pseudonana CCMP1335]
 gi|220972927|gb|EED91258.1| RNA splicing factor [Thalassiosira pseudonana CCMP1335]
          Length = 935

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 120/350 (34%), Gaps = 61/350 (17%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNE----YLVYLLEVQIALAERQYNIAHEKLEMML----Q 148
           A +   A   ++  + +    +          L +Q    ER++  A    E++     +
Sbjct: 520 ADDANAALSRNAVATARAILAHSLAAFPTKRGLWLQAVDLERKHGTASSLDEVLAAASER 579

Query: 149 IPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +P T   + V     E    GD++S++   T+A   +PD+  V  A V+      E  RA
Sbjct: 580 LPRTEIFWLVR--AKEKWLAGDVDSSRNILTEAFKANPDSEPVWLAAVKLEWETGEIERA 637

Query: 208 ITFLNQKKKNAKEWNRNRAILLIAR-------SLENADKG-------------------- 240
              L + ++ A          L+ R       +L+  ++G                    
Sbjct: 638 QKLLERARERAPTARIFMKSALLERECGNFDGALDLLEQGILRYPTFAKMYMMGGQICSE 697

Query: 241 -------DMIASYHDAIESLKLCDNSIMASICAAKSL---------ISQNKKRKAEVILE 284
                   +  +       L+ C  S++    A++            +     KA  +LE
Sbjct: 698 DLKKDRESLDRARKFYQRGLQNCPKSVVLWCLASRLEEKVADYGAGSASAGVTKARSLLE 757

Query: 285 KIWKVNPHPEIANIYTH-LLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSID 342
                N  P+ A ++   +  E   G  K A+ L     +E   S +++++  +      
Sbjct: 758 LARLKN--PKNAELWVEAIRLERRAGNDKLAVSLMARALQECPSSGLLLAE-NISTSPRV 814

Query: 343 QAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +  +K+  A+K  P    +   +A +        DK   W + A+   PD
Sbjct: 815 EQKSKSADAIKRCPDDPRVITAVADLFAGERK-HDKARKWFERAVILDPD 863



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 24/229 (10%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +  +GD+N A+       D +P     W+  A V++   A +  +A   + +  +   + 
Sbjct: 261 AAEVGDVNKARLLLKSVRDTNPKHGPGWIAAARVEE--AAGKTVQARKLIMEGCETCPDS 318

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                + L A  L   D+   I +      + +    S+   + AA    + +  +KA  
Sbjct: 319 ED---VWLEAARLHPQDQAKTILA-----AAARRLPTSVKVFLRAADLE-AHDSSKKA-- 367

Query: 282 ILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +L K  + NP    +      L   +    L       E    SVE  + ++++     S
Sbjct: 368 VLRKALEANPTSVTLWKAAVDLEDADDARIL--LSVAVEKVPHSVEMWLALARL----ES 421

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQANSHNTDKILYWTQSALHA 388
            + A      A K  P +    + A  +E++ +H           A+ +
Sbjct: 422 YENARKVLNQARKQLPTERAVWIAAAKLEESQNHGDMVDRI-VDKAVRS 469



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 68/186 (36%), Gaps = 17/186 (9%)

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           +   +       + ++A   L    K+ ++ N       IA +      G  + +    +
Sbjct: 254 SNTKIASAAEVGDVNKARLLL----KSVRDTNPKHGPGWIAAARVEEAAGKTVQARKLIM 309

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           E  + C +S    + AA+         +A+ IL    +  P      ++           
Sbjct: 310 EGCETCPDSEDVWLEAARLHPQD----QAKTILAAAARRLPT--SVKVFLRAADLEAHDS 363

Query: 311 LKRA--LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
            K+A   +  E N     + V + K A+++   D A     +A++  P   E++L LA++
Sbjct: 364 SKKAVLRKALEANP----TSVTLWKAAVDLEDADDARILLSVAVEKVPHSVEMWLALARL 419

Query: 368 EQANSH 373
           E   + 
Sbjct: 420 ESYENA 425


>gi|158522757|ref|YP_001530627.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511583|gb|ABW68550.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 248

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 54/139 (38%), Gaps = 7/139 (5%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             + + A     KA+ + PD       +   Y+  +EW +AI  L    ++      +  
Sbjct: 75  RKEFDMAIESYKKAIALKPDFATAINNLGVLYMEKEEWDKAIITLTPISESFIYATPHFP 134

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             L+ ++  +  K +   +     ++L+L  + + A     K+ ++  +  +A  ILE  
Sbjct: 135 NFLLGQAYYH--KKEYAKAVEKFQKALELQPDYVFAGHWLGKTYMAMGQAPRAVKILENT 192

Query: 287 WKVNP-----HPEIANIYT 300
            +  P     H ++   Y 
Sbjct: 193 VEKGPAVAVFHLDLGRAYR 211


>gi|108756867|ref|YP_632729.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108460747|gb|ABF85932.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 838

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 90/296 (30%), Gaps = 32/296 (10%)

Query: 98  HNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF 155
            +    R K +  +  Q    N++ ++ L  +  +       A    +      P +   
Sbjct: 173 GDAAATRLKRYLALRPQALAPNDFQIHELLGRAHVLRGDAAAARASFQQAQAGRPESPSV 232

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +  L       G    A+          P A    E + + Y+ A + ++A T      
Sbjct: 233 QL-GLAQVLELEGRAVEARTLLEGVTTRFPQAGDAREKLARLYLGAGDVAKADTQAQAVM 291

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K             +        + +  A+  +  + L+L    ++  +   K+L +Q +
Sbjct: 292 KLGSSP-----AAHLLLGDVRFAQKNAAAAEAEYRKVLQLQPGLVLGQMAVGKALQAQGR 346

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRA----LRLEEINKESVESLVI 330
             +A   LE   +         ++ +L S     G+ +RA     R+ E+        V+
Sbjct: 347 HEEAIQFLEGAVRAGA--NSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQALGYVL 404

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +       G  DQA      A+++ P                        W   AL
Sbjct: 405 LGADHFATGQWDQAIEDYANALQVEP-----------------EHAGAKQWLARAL 443



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 15/243 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A+ ++  A + LE  ++  A       +L   + R G    A     + ++++P   
Sbjct: 340 ALQAQGRHEEAIQFLEGAVRAGANSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQA 399

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   +    +W +AI       +   E    +  L  A +    D+        D
Sbjct: 400 LGYVLLGADHFATGQWDQAIEDYANALQVEPEHAGAKQWLARALAHRARDRAGTGR-LED 458

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRK---AEVILE-------KIWKVNPHPEIANI 298
           A+  L+   +    +  A +   S  + R    A  ++E         W+ +    +   
Sbjct: 459 AVRDLRRAYDLDRGAPMARRLGASLLETRAYADARKVMEQGVMLPGAAWRDS----LLLG 514

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           Y  L + +    L+   R     +E  E        AL    + Q  A       + P +
Sbjct: 515 YARLATNDAQAALEAFNRAAAQTEEPDEQAEASVGAALAEVELGQVDAAVQRLTAVGPSR 574

Query: 359 EIF 361
              
Sbjct: 575 AAA 577


>gi|85373893|ref|YP_457955.1| TPR repeat-containing protein [Erythrobacter litoralis HTCC2594]
 gi|84786976|gb|ABC63158.1| TPR repeat-containing protein [Erythrobacter litoralis HTCC2594]
          Length = 594

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 73/274 (26%), Gaps = 12/274 (4%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
               ++T     L        AL +     A   L  ML     R      L       G
Sbjct: 22  AACSENTPEQPPLER---AIAALEDGDGFGAELILRKMLADGVERSAISAFLGEAELIQG 78

Query: 169 DLNSAQR-YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
               A+R  A  A   +  A      + +  +       A    ++      +  R    
Sbjct: 79  QPAEARRWLAEGAFTDA-TAGRGFHMLGRLEMREGNLPAAGQAFDRAIAFIPDDPR---- 133

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L           G+   +   A  ++KL   +  A +  A+     +    A    E+  
Sbjct: 134 LWTDIGRLRYRGGEQGLAVDAAEHAVKLGPENSEALLFMAQLTRDSHGMAAALPWFERAI 193

Query: 288 KVNP-HPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P   ++   Y   L +       L     +   N   + S  + + +A   G  D A
Sbjct: 194 AAKPDQLDLMAEYAATLGDAGEAQEALAVIRDIASRNPGYLRSYYLQAVLAARAGQYDLA 253

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
                 +          +LL+ I    + N    
Sbjct: 254 RKLLFRSGGFVNDTPAGILLSGIIDLETGNFASA 287


>gi|308388548|gb|ADO30868.1| hypothetical protein NMBB_0379 [Neisseria meningitidis alpha710]
          Length = 402

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   + QQ   ++  L      ++     + + A      ML  P T       
Sbjct: 70  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 181

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +   +      A+E+ K C            
Sbjct: 182 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 241

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 292 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            ++ A   + D +       L      ++   + +  S    W    P       F
Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395


>gi|261340022|ref|ZP_05967880.1| tetratricopeptide repeat protein [Enterobacter cancerogenus ATCC
           35316]
 gi|288317942|gb|EFC56880.1| tetratricopeptide repeat protein [Enterobacter cancerogenus ATCC
           35316]
          Length = 389

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  AV  L  +    G  + A+             IS
Sbjct: 83  GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFMQLVDETDFRIS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++Q Y    +W +AI    +  K  K+  R   A      +L+     DM 
Sbjct: 143 -----ALQQLLQIYQATSDWQKAIDTAERLVKLGKDKQRVEIAHFYCELALQQMGNDDMD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            +     +      NS   SI   +  ++     KA   L
Sbjct: 198 KAMALLKKGAAADRNSARISIMMGRVFMASGDYTKAVESL 237


>gi|242765435|ref|XP_002340974.1| mRNA splicing factor (Prp1/Zer1), putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218724170|gb|EED23587.1| mRNA splicing factor (Prp1/Zer1), putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 941

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 113/335 (33%), Gaps = 47/335 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SIA      AR +++Y  +            L    A  ER +       +++ +     
Sbjct: 551 SIAHGKYETARAIYAYALRVFVTSK---TLWLAA--ADLERNHGTKEALWQVLEKAVEAC 605

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P +    +  L  E  +  ++++A+    +A + +P+   +  A V+    AKE   A  
Sbjct: 606 PQSEVLWMQ-LAKEKWQASEIDNARLVLKRAFERNPNNEDIWLAAVKLETDAKETEHARE 664

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240
            L+  ++ A         +   R L N D+                              
Sbjct: 665 LLSTARREAGTDRVWIKSVAFERQLGNMDEALDLVNQGLQLYPKADKLWMMKGQIYESQK 724

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +        + C  S+   + A++         K+  IL++       P+ A ++T
Sbjct: 725 KYPQAREAYGTGTRACPQSVPLWLLASRLEEKAGVVVKSRSILDRARLAV--PKNAELWT 782

Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356
             +  E     + +A  L     +E   S ++ ++    LE  +  +  +      K+  
Sbjct: 783 ESVRVERRANNISQAKVLMAKALQEVPNSGLLWAESIWHLEPRTHRKPRS-LEAIKKVDN 841

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +F+ +A+I        +K + W + A+ A  D
Sbjct: 842 DPILFVTVARIFWDERR-LEKAMTWFEKAILADSD 875


>gi|158521589|ref|YP_001529459.1| TPR repeat-containing serine/threonin protein kinase [Desulfococcus
           oleovorans Hxd3]
 gi|158510415|gb|ABW67382.1| serine/threonine protein kinase with TPR repeats [Desulfococcus
           oleovorans Hxd3]
          Length = 602

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 78/270 (28%), Gaps = 12/270 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL    A   P+A +M +   +        L    + +  L   + + A      ML   
Sbjct: 259 GLEHFIAALAPIASRMQARPPEPPVMDAGTLTRA-DAEKFLRAGRPDRAIAVYRDMLTRN 317

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                  + L     R G   +A R+   A+ ++     + + + +      +   A+  
Sbjct: 318 PADFQCHHRLGGILYRQGRFQAAIRHLQAAIAVNNQQAELHKDLGRALSRTGQNENAVAA 377

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +      +       +L+    +   +    A+      +L     S+ A    A + 
Sbjct: 378 FQKALALNPD----NLSILLDLGRQYNRQKQPEAAEPYFARALAAHPTSLAAYNGLAHTK 433

Query: 271 ISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
               K  +A  + +K   + P     H  +   +  +  + T            +     
Sbjct: 434 QVLGKTAEAITLFQKALALAPDQPELHYNLGTAHLAI--QETAAAESCFAAALRLKPGFA 491

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +   +  I L   +  QA      A+   
Sbjct: 492 AAHHAMGNICLAAKNPVQAAVHLKAALAAD 521



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 54/197 (27%), Gaps = 11/197 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G  + A       L  +P        +         +  AI  L          N  
Sbjct: 298 LRAGRPDRAIAVYRDMLTRNPADFQCHHRLGGILYRQGRFQAAIRHLQAAIA----VNNQ 353

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A L        +  G    +     ++L L  +++   +   +    Q +   AE    
Sbjct: 354 QAELHKDLGRALSRTGQNENAVAAFQKALALNPDNLSILLDLGRQYNRQKQPEAAEPYFA 413

Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +   +  HP     Y  L         T   +    +   +  +  E    +    L + 
Sbjct: 414 RA--LAAHPTSLAAYNGLAHTKQVLGKTAEAITLFQKALALAPDQPELHYNLGTAHLAIQ 471

Query: 340 SIDQAHAKAMLAMKIAP 356
               A +    A+++ P
Sbjct: 472 ETAAAESCFAAALRLKP 488



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 70/234 (29%), Gaps = 11/234 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +      Q   A    +  L +       +  L  +  R     +A+ Y  +AL   P 
Sbjct: 362 GRALSRTGQNENAVAAFQKALALNPDNLSILLDLGRQYNRQKQPEAAEPYFARALAAHPT 421

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           +      +     +  + + AIT   +    A +       L  A    +    +  A+ 
Sbjct: 422 SLAAYNGLAHTKQVLGKTAEAITLFQKALALAPDQPELHYNLGTA----HLAIQETAAAE 477

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIYTH 301
                +L+L      A        ++     +A V L+          +   ++      
Sbjct: 478 SCFAAALRLKPGFAAAHHAMGNICLAAKNPVQAAVHLKAALAADGSGVSALYDLGRACR- 536

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +  +  G +    R  +   +   + + ++++    G  + A     +A ++ 
Sbjct: 537 -MQNDLDGAVSAFGRYLKFAAKDTTAYLALAEVLEAQGKQEAAGKYRRMAEELN 589


>gi|147919208|ref|YP_687057.1| hypothetical protein RCIX2687 [uncultured methanogenic archaeon
           RC-I]
 gi|110622453|emb|CAJ37731.1| hypothetical protein RCIX2687 [uncultured methanogenic archaeon
           RC-I]
          Length = 348

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 75/191 (39%), Gaps = 21/191 (10%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+   P       A+   Y +   +S A+  L +  K   +     A +  +  +   
Sbjct: 16  EQAVKTRPGDADARRALGLAYGIKGRYSDAVRELEEAAKLRPDS----AEIHYSLGIAYD 71

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE-- 294
             G+   +  +  ++++L D+ + A +  A +L        A  +  ++ K  P+ PE  
Sbjct: 72  ALGETKKASQEFRKAVELKDDYVEARLSLAITLNELGLVDDALPVFTELVKQAPNLPEAR 131

Query: 295 -------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                  +A  Y     ++ +  L+ A++L   N E  ++ ++++    + G + +A   
Sbjct: 132 VGFAISLMAAGYL----DDAIEMLQEAVKL---NPEYFDAYMLLAGAYADKGDLREAENA 184

Query: 348 AMLAMKIAPRK 358
              A+K  P  
Sbjct: 185 YKQAVKANPSS 195



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 84/235 (35%), Gaps = 13/235 (5%)

Query: 129 IALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
               + +Y+ A  E  E     P + E   YSL      +G+   A +   KA+++  D 
Sbjct: 35  AYGIKGRYSDAVRELEEAAKLRPDSAEI-HYSLGIAYDALGETKKASQEFRKAVELKDDY 93

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                ++            A+    +  K A      R       ++     G +  +  
Sbjct: 94  VEARLSLAITLNELGLVDDALPVFTELVKQAPNLPEARV----GFAISLMAAGYLDDAIE 149

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSEN 306
              E++KL      A +  A +   +   R+AE   ++  K NP  P+    Y   ++++
Sbjct: 150 MLQEAVKLNPEYFDAYMLLAGAYADKGDLREAENAYKQAVKANPSSPD--AYYNLAVTQS 207

Query: 307 TVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               L  A++   I      + +E+   +  +  + G +D+A  +    + + P 
Sbjct: 208 ERNLLTEAIQNYRIAIQHSPDFLEAHYNLGLLLDDKGLVDEAIREYETTLDLDPD 262


>gi|75906889|ref|YP_321185.1| hypothetical protein Ava_0666 [Anabaena variabilis ATCC 29413]
 gi|75700614|gb|ABA20290.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 293

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 47/145 (32%), Gaps = 16/145 (11%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------- 176
           +L  Q          A      +L        A+  +           +A          
Sbjct: 121 VLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGMVVLLLDQQRPEAAVGLLQDTLTN 180

Query: 177 ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIAR 232
           A +A  I P +      + ++   +   K + +AI+  +Q  +K+ K++       ++A+
Sbjct: 181 ANQANTIQPGSVDVVAVQVLLGNVHAAQKRYPQAISAFDQAIQKDTKDFRP-----VLAK 235

Query: 233 SLENADKGDMIASYHDAIESLKLCD 257
           ++    +G    +      +L L  
Sbjct: 236 AMLLKQQGKASEAKPLFDSALALAP 260


>gi|20090792|ref|NP_616867.1| hypothetical protein MA1943 [Methanosarcina acetivorans C2A]
 gi|19915855|gb|AAM05347.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 429

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 51/170 (30%), Gaps = 15/170 (8%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+G    A   + KAL  +P       A          +  +I   +   K   +  R  
Sbjct: 152 RLGQHEKALEASEKALTSNPKLAGAWHAKGTVLADLGRYEESIRAYDSALKINPKLAR-- 209

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                 ++         + +      +L++  ++    +  A   +   K +KA     K
Sbjct: 210 --AWEGKAFALCSLDRPVEAIIAYDSALQINPDNAKTWVGKALVHLKLGKYKKALEPCNK 267

Query: 286 IWKVNPHPEIANIY-------THLLSENTVGKLKRALRLEEINKESVESL 328
              +   P++A  +         L  ++    L    R   I  +  ++ 
Sbjct: 268 AISIK--PDLAEAWYCKGMILAGLEKDDEA--LGAFERALRIRPDYPDAR 313


>gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 847

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 9/202 (4%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     R G+  +A     +A++I+P+           +     +  AI   N+  + 
Sbjct: 429 RGL--THRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEI 486

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +    A+    R   +  +G+  A+  D   ++++  N  +A      +   Q    
Sbjct: 487 NPNY----ALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYE 542

Query: 278 KAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            A     +  ++NP+  +A     + H    N    +    R  EIN     +       
Sbjct: 543 AAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFA 602

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
               G+   A A    A++I P
Sbjct: 603 HRSQGNYKAAIADYNRAIEINP 624



 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 82/270 (30%), Gaps = 9/270 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G       N   A  +  Y        N  L Y         +  Y  A       ++I
Sbjct: 463 RGFAHRRQGNYEAA--IADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEI 520

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A         R G+  +A     +A++I+P+           +     +  AI 
Sbjct: 521 NPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIA 580

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
             N+  +    +    A+    R   +  +G+  A+  D   ++++  N   A      +
Sbjct: 581 DYNRAIEINPNY----ALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFA 636

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVE 326
             SQ     A     +  ++NP+   A     + H    N    +    R  EIN     
Sbjct: 637 HRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHN 696

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +           G+ + A A    A++I P
Sbjct: 697 AYNNRGFAHRSQGNYEAAIADYNRAIEINP 726


>gi|40063713|gb|AAR38494.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 1120

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 11/162 (6%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G L++A +   KAL I PD   V   +        +   A+    Q      ++    A 
Sbjct: 626 GQLDTAIKRYEKALVIKPDYAEVHNNLGIALKDLGQRDTAVKSFEQALAIKPDY----AE 681

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                 +   + G    +     +++ +  +   A      +L   ++   A    E+  
Sbjct: 682 AHNNLGVTLQELGQHDTAVKSYEQAIAIKPDYAEAHNNLGNALRELDQLDAALKSYEQAI 741

Query: 288 KVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
            +NP     H  +  +   L   +T   +K   +   I  + 
Sbjct: 742 VINPEYAVAHYNLGIVLKELGQRDTA--VKSFEKALAIKPDY 781



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 81/278 (29%), Gaps = 39/278 (14%)

Query: 92  LMSIAA-HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           ++++ +   I  A      + +     +E L++ +     +   Q + +  + E      
Sbjct: 16  VIALYSNGQIHEALDAVEALIKDD--PHEPLLFNISGACYVGLGQLDESVTRYE------ 67

Query: 151 ATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
             R  A+   Y E+          +G  ++A +   +AL I PD       +        
Sbjct: 68  --RAIAIKPDYVEAHNNLGNVLKELGQRDTAVKSFEQALAIKPDYAEAHNNLGVTLQELG 125

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +   A+    Q      ++    A       +   D G +  S     ++L +  +   A
Sbjct: 126 QLDAAVKCYEQALAIKPDY----AEAHNNLGVTLQDLGQVDRSIKSLNKALAIKPDYAQA 181

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
                 S   + +   A    E+   +   P+ A         +    L    +    + 
Sbjct: 182 RNNLGVSFQERGQIDGAVKQYEQAVAIK--PDYA---------SAHHNLSVLKKYTASDP 230

Query: 323 ESVESLVIVSKIALEMGS-----IDQAHAKAMLAMKIA 355
           +  +   ++S   L            A     L  +  
Sbjct: 231 QITQMQSLLSTSNLSQSDRIHLCFALARVYENLGKQDE 268



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 4/127 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            Q + A +  E  L I      A  +L      +G  ++A +   +A+ I PD       
Sbjct: 660 GQRDTAVKSFEQALAIKPDYAEAHNNLGVTLQELGQHDTAVKSYEQAIAIKPDYAEAHNN 719

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +   A+    Q      E+    A+      +   + G    +     ++L
Sbjct: 720 LGNALRELDQLDAALKSYEQAIVINPEY----AVAHYNLGIVLKELGQRDTAVKSFEKAL 775

Query: 254 KLCDNSI 260
            +  + +
Sbjct: 776 AIKPDYV 782


>gi|225025183|ref|ZP_03714375.1| hypothetical protein EIKCOROL_02077 [Eikenella corrodens ATCC
           23834]
 gi|224942042|gb|EEG23251.1| hypothetical protein EIKCOROL_02077 [Eikenella corrodens ATCC
           23834]
          Length = 392

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 62/219 (28%), Gaps = 21/219 (9%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              AR +           N Y ++L   ++     + + A    + +L+ P T       
Sbjct: 57  GSAARHLADMTDLLPAGDNTYELHLTLGKLYRQRGENDKAIRLHQALLEAPET--VGEKR 114

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDA------PWVTEAVVQQYVLAKEWSRAITFLNQ 213
                    D  SA     +A  I              + ++  Y   ++W++AI     
Sbjct: 115 NQVLFELGQDYQSA-GLVDRAEQIFLGLQQGNMAAQARQVLLNIYQQDRDWAKAIDTAQL 173

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSL 270
              + + +    A      +     K D   +      A+++ + C     A++      
Sbjct: 174 LSHDEQTYRFEIAQFHCELAQAALFKSDFEQARTNIAKALDANRKCAR---ANMILGDLE 230

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
                   A      I K N      + Y  ++ E    
Sbjct: 231 QKLGNYPAAVAAYTAIEKQN------HAYLSMVGEKLYD 263


>gi|307110542|gb|EFN58778.1| hypothetical protein CHLNCDRAFT_34097 [Chlorella variabilis]
          Length = 932

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 98/306 (32%), Gaps = 51/306 (16%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E +   + E L+ +L+      P      + +   E    GD+  A+    +A  
Sbjct: 568 RAAQLE-KAAGSRESLDALLRKAVQYCPQAEVLWLMA-AKEKWLSGDVAGARSVLEEAFV 625

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +PD+  +  A  +      E  RA   L + +++          + +  ++   + G  
Sbjct: 626 RNPDSEEIWLAAFKVEFENAELDRARLILAKAREHPPASTAR---VWMKSAMVEREAGAA 682

Query: 243 IASYHDAIESLKLCDNS----------------------------------IMASICAAK 268
            A      E ++                                       I   + AA+
Sbjct: 683 GAERELLQEGIRRFPYFWKLHIMLGQLEERLGNADAARLAYAAGIKRCLDCIPLWVSAAR 742

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEIN-KESVE 326
                    KA  +LE+    N  P+ A ++   + +E      K    L     ++  +
Sbjct: 743 LEERAGNVAKARALLEQARLKN--PKNAQLWLAAVRTELRAQNQKAGEALMAKALQDCPD 800

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           S  + ++  + M    Q  ++++ A+K       +   +A +   +    DK   W   A
Sbjct: 801 SGPLWAET-INMAPRPQRKSRSVDALKKCNDDPHVVAAVAALFWLDRK-VDKARSWFNRA 858

Query: 386 LHAMPD 391
           +   PD
Sbjct: 859 VTLNPD 864



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 9/131 (6%)

Query: 163 ESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           E  R G + +A+     AL + P   + W   A +++         +   L+   + A +
Sbjct: 538 ECMRRGSVETARAIYAHALSVFPGKKSIWRRAAQLEKAA------GSRESLDALLRKAVQ 591

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +     +L +  + E    GD+  +     E+     +S    + A K      +  +A 
Sbjct: 592 YCPQAEVLWLMAAKEKWLSGDVAGARSVLEEAFVRNPDSEEIWLAAFKVEFENAELDRAR 651

Query: 281 VILEKIWKVNP 291
           +IL K  + +P
Sbjct: 652 LILAKA-REHP 661


>gi|151554489|gb|AAI49783.1| OGT protein [Bos taurus]
          Length = 908

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P  P     +  
Sbjct: 104 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLAN 163

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                   + A    N   +         A  L   +    ++G++  +     ++L++ 
Sbjct: 164 ALKEKGSVAEAEDCYNTALRLCPT----HADSLNNLANIKREQGNIEEAVRLYRKALEVF 219

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K ++A +  ++  +++P    A+ Y+++ +     ++  G L
Sbjct: 220 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FADAYSNMGNTLKEMQDVQGAL 277

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A A    A+K+ P 
Sbjct: 278 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 323



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G++  A  +  KA+ + P+       +      A+ + RA+    +    +     N 
Sbjct: 65  AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NH 120

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A++    +    ++G +  +      +++L  +   A    A +L  +    +AE     
Sbjct: 121 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNT 180

Query: 286 IWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS 340
             ++ P H +  N   ++  E   G ++ A+RL         E   +   ++ +  + G 
Sbjct: 181 ALRLCPTHADSLNNLANIKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 238

Query: 341 IDQAHAKAMLAMKIAPR 357
           + +A      A++I+P 
Sbjct: 239 LQEALMHYKEAIRISPT 255



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 162 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 221

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 222 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 277

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 278 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 335

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 336 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 371


>gi|2266994|gb|AAB63466.1| O-linked GlcNAc transferase [Homo sapiens]
 gi|6911265|gb|AAF31458.1| HRNT1 [Homo sapiens]
 gi|18250916|emb|CAC86129.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl
           transferase [Homo sapiens]
 gi|119625690|gb|EAX05285.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Homo
           sapiens]
          Length = 920

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+++ P  P     +  
Sbjct: 116 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLAN 175

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                   + A    N   +         A  L   +    ++G++  +     ++L++ 
Sbjct: 176 ALKEKGSVAEAEDCYNTALRLCPT----HADSLNNLANIKREQGNIEEAVRLYRKALEVF 231

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K ++A +  ++  +++P    A+ Y+++ +     ++  G L
Sbjct: 232 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FADAYSNMGNTLKEMQDVQGAL 289

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A A    A+K+ P 
Sbjct: 290 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 335



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G++  A  +  KA+ + P+       +      A+ + RA+    +    +     N 
Sbjct: 77  AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NH 132

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A++    +    ++G +  +      +++L  +   A    A +L  +    +AE     
Sbjct: 133 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNT 192

Query: 286 IWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS 340
             ++ P H +  N   ++  E   G ++ A+RL         E   +   ++ +  + G 
Sbjct: 193 ALRLCPTHADSLNNLANIKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 250

Query: 341 IDQAHAKAMLAMKIAPR 357
           + +A      A++I+P 
Sbjct: 251 LQEALMHYKEAIRISPT 267



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A +     L++  T   ++ +L       G++  A R   KAL++ P+
Sbjct: 174 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 233

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        +   A+    +  + +  +    A           +  D+  + 
Sbjct: 234 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 289

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 290 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 347

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 348 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 383


>gi|295692883|ref|YP_003601493.1| o-linked transferase [Lactobacillus crispatus ST1]
 gi|295030989|emb|CBL50468.1| O-linked transferase [Lactobacillus crispatus ST1]
          Length = 415

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 21/230 (9%)

Query: 146 MLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           +  +P +    + SL  ++      G + +A+    +AL ++P+   +   + +   L+ 
Sbjct: 89  LYNVPESSSAYLDSLLVQADYYQTNGLIETAKDKLIRALQLAPEEDAIKFGLAEIEYLSG 148

Query: 203 EWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + +A+     L +++    E N  + +      L N ++   +     A   L +    
Sbjct: 149 NYEQALELYQDLIKRQSTFSEVNLYQRLFATFAKLGNYEEAAKVI-REHANSILDIDSK- 206

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314
                 A   L+S    ++A   L+++ + +P     +P +A  Y H    +    L+ A
Sbjct: 207 ----YEAGLVLLSVGDDKQAIKFLDEVIEQSPDYVNAYPLLAQAYDH--QHDNEQVLRTA 260

Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 N E  E+L  + ++ A  +  +D A       +K+AP      +
Sbjct: 261 QAGLAYN-ELDETLYSMGARAAANLNELDTARDLLEKGLKVAPDNSDLRM 309


>gi|171915159|ref|ZP_02930629.1| putative outer membrane protein (ComQ) [Verrucomicrobium spinosum
           DSM 4136]
          Length = 809

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A    +Q+    +      A  L+  +  + DKGD  ++     ++  L  ++ +++   
Sbjct: 47  ARNLADQELVR-RNARVAEAQALLVEANSHNDKGDYESALRLYRQAWDLLPDAPLSAAVR 105

Query: 267 --AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL------- 317
             A+   S+    +A  + E+         ++++     +      L    RL       
Sbjct: 106 NQARDGYSRVAVAQAAKLAEQAKYAEARTLLSSVLADDFNPGYTDALTLQKRLDDPARYE 165

Query: 318 EEINKESV------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQA 370
             +  E +      E  + + +  + +G  D A+ +    +++ P        + + EQ 
Sbjct: 166 PALTPEHIAKVTEVEEKLRLGQGLMSLGDFDAANERFRDVLRLDPYNGAARRGMERAEQH 225

Query: 371 NSHNTDKIL 379
            +   D   
Sbjct: 226 KAQYYDVAR 234


>gi|149923428|ref|ZP_01911833.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149815735|gb|EDM75261.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 3491

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 81/257 (31%), Gaps = 49/257 (19%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE------------------------ 203
            GD + A+    +A+ I P      +A+   Y L ++                        
Sbjct: 822  GDPDLARSAYERAVRIRPKHRGALDALADLYRLEEDSEPLAKVLGTLRLIADSDEEAFSF 881

Query: 204  -WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             W +A   L   +K  +       IL   R  +      ++ +Y  A +  KL  +    
Sbjct: 882  AWEQAQLLLLDVEKPGEAAEVLAWILEGPRRGDPEVNRSLLEAYRGASDREKLVAH---- 937

Query: 263  SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +           ++ +   ++   W+V               +N    ++   R  E   
Sbjct: 938  AELMLIGTADTAERAELFQLIVDAWQVL--------------DNKPAAMQAIRRRLEEFP 983

Query: 323  ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---APRKEIFLL--LAQIEQANSHNTDK 377
            E  E    + ++  E+G  + A       +++    P ++I  L  +A++      +  +
Sbjct: 984  EDPEGHAKLGELQAELGEFELALRSLARKLELVARDPDEQIDTLKRMAELADQGLGDARR 1043

Query: 378  ILYWTQSALHA-MPDPL 393
             L   + A      DP 
Sbjct: 1044 ALELLRRASGIDPTDPA 1060



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 65/214 (30%), Gaps = 37/214 (17%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D+++A+     AL   PD       + +  V + ++  A   L Q  +          ++
Sbjct: 2399 DVDAARSRFDAALAEDPDHAEARLGLGEVLVESGDFEGAEKQLEQAVEALGLVRAQEQLV 2458

Query: 229  --LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              L+  +           +Y     +L+   +         +  +  N+ R         
Sbjct: 2459 EGLVLLARVLEATDRAGEAYRRLTAALRHDPD-----NMGIRLAVVDNRVR--------- 2504

Query: 287  WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                 H ++ ++   L         KR   L E      + ++  +  AL         A
Sbjct: 2505 --ARRHRDVVSVVDQLE--------KRLTALRE-----ADGVLSKADAALVAQM-QAEAA 2548

Query: 347  KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
             A L ++           A++E A  H+   +  
Sbjct: 2549 AAELELRRHEEAR-----ARLEAALGHDASNVRA 2577



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 10/127 (7%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------ 215
            +  R   +  A  +  +AL + P     +EA++  ++    W RA   +  +       
Sbjct: 161 IQRRRFHAMGEAVAHYEQALRVDPGLTGASEALITLHLGGGAWERAFQLMETELGVLEGD 220

Query: 216 ----KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
               ++     R   + L    L      D+ ++      ++K+  NS+ A        +
Sbjct: 221 PRFAQDPAVAARISELHLRLARLATEHYDDLASAARHLQAAIKMAPNSLAALRAFGNLYL 280

Query: 272 SQNKKRK 278
              K  +
Sbjct: 281 GSGKASE 287


>gi|88603309|ref|YP_503487.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88188771|gb|ABD41768.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 984

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 65/211 (30%), Gaps = 18/211 (8%)

Query: 84  GYKALYTGLMSIA---AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
           G+ A    L ++A      +  A ++ + V ++       LV  ++  +A      + A 
Sbjct: 154 GFMATIHALKALALIHTGEMSAAAEIMAAVGEE--GDKMPLVPYVKGILAWRSGDISAAE 211

Query: 141 EKLEMMLQIPATRE---FAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVT-EAVV 195
             L    +           +  L  E  R    + A           +P  P        
Sbjct: 212 TFLRASCEDQPQDMQSKVDLAHLLTECGRE---DEALVIRRDISGFYAPPHPEAAPVFRA 268

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           ++ + +  +  A  FL   +K++ +       L I         G        A    K 
Sbjct: 269 EELLKSGRYEEAEVFLESAQKSSPD----DMDLFIPYLSSLYFTGRYDDLIRLAETGEKA 324

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             ++  A    A +L S  K R+A  +L   
Sbjct: 325 S-DAWKAIYLKASALYSSGKIREAIRVLITA 354


>gi|58258167|ref|XP_566496.1| pre-mRNA splicing factor prp1 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57222633|gb|AAW40677.1| pre-mRNA splicing factor prp1, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 946

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 32/268 (11%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD+  AQ    +A   + D+  +  A  +      E   AI  L + K  A   
Sbjct: 624 KEKWVGGDIPGAQAILAEAFKQNEDSESIFLAAAKLAAETGEMEAAIQILEKAKAQADTE 683

Query: 222 NRNRAILLIARSLENADKG-----------------------------DMIASYHDAIES 252
                  ++ R L   D+                              ++  + +   + 
Sbjct: 684 RVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRGQIYESRNEVALARNAYAQG 743

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            + C  SI   I +A+         KA  +LEK    NP  +     +  + E T    +
Sbjct: 744 CRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKNDELWAESIKIEERTGSPQQ 803

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
               L    +E   S ++ S +A+ M +  Q   +++ A+K A      +L       + 
Sbjct: 804 AKSVLARAMQECPASPLLWS-MAIFMETPQQRKGRSVDAIKKAGEHPAVILAVARNFWSE 862

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGY 400
              +K   W  +A+ A  D  W    GY
Sbjct: 863 RKIEKTRQWMANAITA--DEDWGDAWGY 888


>gi|224094184|ref|XP_002196319.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 3
           [Taeniopygia guttata]
          Length = 914

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 5/149 (3%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195
            A E     L++  T     Y+L      + D   A +   +AL+++P         A++
Sbjct: 581 KAKEAYLRALELDRTNADLWYNLAIVYIELKDPTEALKNFNRALELNPTHKLALFNSALL 640

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            Q   + + +R      Q+  +  +     +       +   D    + +     ++++L
Sbjct: 641 MQ--ESGD-ARLRPEAKQRLLHYVKEEPQDSNGYFNLGMLAMDDKKDLEAEAWMKKAIRL 697

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILE 284
             N   A    A       K+  A  +LE
Sbjct: 698 QPNFRSALFNLALLYSQTGKELMALPVLE 726


>gi|108758609|ref|YP_629452.1| hypothetical protein MXAN_1193 [Myxococcus xanthus DK 1622]
 gi|108462489|gb|ABF87674.1| conserved domain protein [Myxococcus xanthus DK 1622]
          Length = 1219

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 72/203 (35%), Gaps = 9/203 (4%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++  +    + +    FL             R  L    +    D+G         
Sbjct: 343 ARLQLLAAHAQRDDLNERRRFLEAAIAADPAMPEARVAL----ADHELDRGHPERVQPLV 398

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV 308
              L+   + + A +  A++  +  ++ KA  ++E+ +++ P  P        +  +   
Sbjct: 399 APVLEKTPDDVNARLVLARAHEALGERPKAHALVEETFRLQPRVPRAVRAAAQVSRQLDR 458

Query: 309 GK--LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365
           G+  + R   +  +  +   +  +++ +  E G ++ A  +    +K+ P      + LA
Sbjct: 459 GREAMDRMRVVLALRFDDTTTRHMLATMLAEAGQVESAQREYAQLVKLNPFDNGSRVRLA 518

Query: 366 QIEQANSH-NTDKILYWTQSALH 387
           +++ +N        L+    AL 
Sbjct: 519 ELKASNGAVEEAVALFAEARALS 541



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 86/265 (32%), Gaps = 33/265 (12%)

Query: 119 EYLVYLLEVQI------ALAERQYNIAHEKLEMMLQIPAT-------------REFAVYS 159
             L   L   +      A     Y           +   T             ++  +  
Sbjct: 288 PTLTSALRAMVEKNPDDAALRGDYARVLGFFRAYDEREHTASAEAARAAEAAPKDARLQL 347

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L   + R  DLN  +R+   A+   P  P    A+    +      R    +    +   
Sbjct: 348 LAAHAQR-DDLNERRRFLEAAIAADPAMPEARVALADHELDRGHPERVQPLVAPVLEKTP 406

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRK 278
           +    R +L    +  +   G+   ++    E+ +L    +  ++ AA  +  Q ++ R+
Sbjct: 407 DDVNARLVL----ARAHEALGERPKAHALVEETFRLQPR-VPRAVRAAAQVSRQLDRGRE 461

Query: 279 AEV----ILEKIWKVNPHPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A      +L   +        +A +        +  +     +L ++N     S V +++
Sbjct: 462 AMDRMRVVLALRFDDTTTRHMLATMLAEAGQVESAQR--EYAQLVKLNPFDNGSRVRLAE 519

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358
           +    G++++A A    A  ++P +
Sbjct: 520 LKASNGAVEEAVALFAEARALSPDE 544



 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 19/164 (11%)

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNY-DKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112
           A  L+    R     P  +          D+G +A+    + +A                
Sbjct: 428 AHALVEETFRLQPRVPRAVRAAAQVSRQLDRGREAMDRMRVVLA---------------- 471

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
              F +    ++L   +A    Q   A  +   ++++      +   L       G +  
Sbjct: 472 -LRFDDTTTRHMLATMLAE-AGQVESAQREYAQLVKLNPFDNGSRVRLAELKASNGAVEE 529

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           A     +A  +SPD P V E   +  + A     A+    +   
Sbjct: 530 AVALFAEARALSPDEPEVYEREGRALLAAGRREPALASFERSLA 573


>gi|154248048|ref|YP_001419006.1| TPR repeat-containing protein [Xanthobacter autotrophicus Py2]
 gi|154162133|gb|ABS69349.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus
           Py2]
          Length = 655

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 13/242 (5%)

Query: 127 VQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            + A       +  A      + +  +        L FE  ++G    A   A +  D  
Sbjct: 10  ARAADLHRMGHFEQALAIYRRLAKAHSASFDIQRLLIFELLQVGRPKEAVIAARRLGDAH 69

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P  P     +   +     W +A+         + E     A  L   +     +     
Sbjct: 70  PRNPHAAILLGASHQGLGNWEKALAAFQVAL--SLEGAPLEARFLAGNAFCALGRYAEGV 127

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIY 299
           + +DA+ +      SI A    A +L    +  +A    E +  + P  P     +A   
Sbjct: 128 ACYDAVLAA--DARSIEALSNRAGALARLGRLEEALRDSEALVALQPWQPLHLVNLAGTL 185

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L    +   +  A     +     ++  +  +  L +G   +A      A+ +AP+  
Sbjct: 186 LELQR--SRDVIAAADAALRLAPGLADAEYLRGQALLGLGKWAEARVSLEKAVDLAPQNT 243

Query: 360 IF 361
            F
Sbjct: 244 AF 245


>gi|332532510|ref|ZP_08408388.1| hypothetical protein PH505_af01250 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038153|gb|EGI74600.1| hypothetical protein PH505_af01250 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 557

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 56/262 (21%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ------------------------IALAER 134
           +  L +K ++Y         + L+ L   Q                          +A  
Sbjct: 164 DTALDKKNNNYSPILLRLKGDALLRLKRAQDAKDFFKSVLDIQKFAWAKVGLVEALIANN 223

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           ++ +A   L+ ML+   TR  A+  L     ++     AQ + ++A DI+P      +++
Sbjct: 224 EHILAQRMLKTMLERQETRLVALDLLGRLEIKLNQFELAQSFLSQAADIAPRNITRQKSL 283

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRN------RAILLIARS----LENADKGDMIA 244
               ++  ++ ++       +K+   + ++         L  AR+        D+ D I 
Sbjct: 284 SNVSLINHDYEKSYLT----QKDIATFAKHSIHDHPDVYLNAARAGIDFALTTDQTDQIQ 339

Query: 245 --SYHDAIESLKLCDNSIMAS------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             S         L       +      +  A+    +++ +KA+ ++E         ++ 
Sbjct: 340 RISRQTNQYINDLKKQFPNNANQAQIDVLNARLHYLKDEHQKAKKLIE---------QLD 390

Query: 297 NIYTHLLS-ENTVGKLKRALRL 317
           +  TH+ S +  + K K    L
Sbjct: 391 DDDTHIRSVDGALDKAKAFHEL 412


>gi|322419109|ref|YP_004198332.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320125496|gb|ADW13056.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 660

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 67/232 (28%), Gaps = 11/232 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A  +   +             L     +  +   A      AL + P A  V  A
Sbjct: 386 GDAAGAVNEFRTVATERPQFMEGHIRLAEAYLQKKEPALALDALMTALKLDPSAREVQFA 445

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + + +    E  +A   L +     +  +    + L   +   A  GD   +     E  
Sbjct: 446 LSRYHEAQGEAKQARALLVR-MVAKEPGDLEARVELGDFA---ARSGDARGAEAQYAEVK 501

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGK 310
           K      +         + Q K ++A    EK ++ N    +      +    S ++  +
Sbjct: 502 KRAPGLPIGYARTGALYVRQGKLQRALAEYEKAYRQNEDSWLLANDLAFLLAQSASSPRE 561

Query: 311 LKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           L RAL L      +N +    L  +  +    G   +A      A    P  
Sbjct: 562 LDRALALAEKARALNPQGANVLDTMGWLHYRRGDAVKATELLRQAHARNPDA 613



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 98/341 (28%), Gaps = 40/341 (11%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146
           L  G + +A      AR+    V  +         +LL     L         E L   +
Sbjct: 135 LLKGAVLVAGQEHGQARQFLEGVIARGVAK--PDAFLLLANACLQAGDRKAGEEMLRRGL 192

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
              P + E  + SL   +   G  +       +A  + PD P     +   Y  A +  R
Sbjct: 193 KANPRSVELVL-SLAGITANSGRGDETATLLEQAAVLEPDNPGHRINLAALYWAAGKEPR 251

Query: 207 AITFL-----------NQKKKNAKEWNRNRAILLIARSLENADKGDMI------------ 243
           A   L            ++ + A  ++  R      R L+     +              
Sbjct: 252 AAEILHKLVQAQPADQERRLRVASFYSERRRFADFERELKEGLAANPKSTELRFALADLY 311

Query: 244 ---ASYHDAIESLKLC-------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                   A+E+LK C          I A    AK  + + +  +A   +E++ K +P  
Sbjct: 312 LGREQADRAVETLKGCLSGKAGDPEVIRAKTALAKVCLQRAELDRASAYIEEVLKESPKN 371

Query: 294 EIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             A        L   +  G +     +     + +E  + +++  L+      A    M 
Sbjct: 372 VDARYLKGGVQLKKGDAAGAVNEFRTVATERPQFMEGHIRLAEAYLQKKEPALALDALMT 431

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           A+K+ P                    +        +   P 
Sbjct: 432 ALKLDPSAREVQFALSRYHEAQGEAKQARALLVRMVAKEPG 472



 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 55/189 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  + + ++      +   V     +   A+ +   A   L  M+        A   L  
Sbjct: 423 ALALDALMTALKLDPSAREVQFALSRYHEAQGEAKQARALLVRMVAKEPGDLEARVELGD 482

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            + R GD   A+    +    +P  P         YV   +  RA+    +  +  ++  
Sbjct: 483 FAARSGDARGAEAQYAEVKKRAPGLPIGYARTGALYVRQGKLQRALAEYEKAYRQNEDSW 542

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L    +   +   ++  +   A ++  L                 +    KA  +
Sbjct: 543 LLANDLAFLLAQSASSPRELDRALALAEKARALNPQGANVLDTMGWLHYRRGDAVKATEL 602

Query: 283 LEKIWKVNP 291
           L +    NP
Sbjct: 603 LRQAHARNP 611


>gi|282164262|ref|YP_003356647.1| hypothetical protein MCP_1592 [Methanocella paludicola SANAE]
 gi|282156576|dbj|BAI61664.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 383

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 12/133 (9%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK- 288
           +A  L+  D  D I       E+L++    + A     +   +      A  + +K  K 
Sbjct: 235 LAYILDLNDDPDTIEELR---EALRIRPKYLDAMFLLGEHYGNHGMIDDAVRMFKKAMKT 291

Query: 289 ----VNPHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                 PH  I   Y    + +    +LKRAL+L   +  + E+   ++++  E    D+
Sbjct: 292 YPDNALPHYYIGATYADEGMFKEARKELKRALKL---DPGNFEARRRLAQLYAEDELYDE 348

Query: 344 AHAKAMLAMKIAP 356
           A  +    +   P
Sbjct: 349 AIEEYEKLIATEP 361


>gi|91088509|ref|XP_971592.1| PREDICTED: similar to pre-mRNA-splicing factor prp1 [Tribolium
           castaneum]
 gi|270011722|gb|EFA08170.1| hypothetical protein TcasGA2_TC005794 [Tribolium castaneum]
          Length = 933

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 36/198 (18%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+     A  
Sbjct: 571 RAAHLEKNH-GTRESLEGLLQRAVAHCPKSEILWLMG-AKSKWLAGDVPAARGILALAFQ 628

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+     +E+ RA   L + + +A                     A  
Sbjct: 629 ANPNSEEIWLAAVKLESENREYERARRLLAKARGSAPTPRVMMKSAKLEWSLNDLKAAQN 688

Query: 229 LIARSLE---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L+  +L+               +  +G++  ++     ++K C NSI   I  ++    +
Sbjct: 689 LLDEALKVFPDFAKLWMMMGQIHEQEGELSKAFDVYYGAIKKCPNSIPLWILLSRLEEKR 748

Query: 274 NKKRKAEVILEKIWKVNP 291
               KA  +LEK    NP
Sbjct: 749 GLLIKARSMLEKARLKNP 766



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 77/225 (34%), Gaps = 22/225 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 280 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPQSEDLW- 338

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 339 -------LEAARINPQDTAKAVIAQAARHIPTSVRIWIKAADVETETKAKR---RVYRKA 388

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    +VE  + ++++     + + A
Sbjct: 389 LEHIPNSVRLWKAAVELENPEDARILLSRA---VECCPTAVELWLALARL----ETYENA 441

Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                 A +  P  K+I+   A++E+A + N   +    + A+ +
Sbjct: 442 RKVLNKARENIPTDKQIWTTAAKLEEA-NGNHAMVEKIIERAITS 485



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 76/214 (35%), Gaps = 15/214 (7%)

Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             G    A+     AL   P   + W+  A +++             L    + A     
Sbjct: 544 SQGAYECARTVYNHALATFPGKKSIWLRAAHLEKN------HGTRESLEGLLQRAVAHCP 597

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              IL +  +      GD+ A+      + +   NS    + A K      +  +A  +L
Sbjct: 598 KSEILWLMGAKSKWLAGDVPAARGILALAFQANPNSEEIWLAAVKLESENREYERARRLL 657

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMG 339
            K     P P +      L  E ++  LK A  L +       +  +  +++ +I  + G
Sbjct: 658 AKARGSAPTPRVMMKSAKL--EWSLNDLKAAQNLLDEALKVFPDFAKLWMMMGQIHEQEG 715

Query: 340 SIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372
            + +A      A+K  P    +++LL+++E+   
Sbjct: 716 ELSKAFDVYYGAIKKCPNSIPLWILLSRLEEKRG 749



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 27/163 (16%)

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIA 296
           D  D+  +        +   N   A I +A+      K + A  ++ K  +VNP   ++ 
Sbjct: 279 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPQSEDLW 338

Query: 297 NIYTHLLSENTVGKL-------------------------KRALRLEEINKESVESLVIV 331
                +  ++T   +                         K   R+     E + + V +
Sbjct: 339 LEAARINPQDTAKAVIAQAARHIPTSVRIWIKAADVETETKAKRRVYRKALEHIPNSVRL 398

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSH 373
            K A+E+ + + A      A++  P   E++L LA++E   + 
Sbjct: 399 WKAAVELENPEDARILLSRAVECCPTAVELWLALARLETYENA 441



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 8/164 (4%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     +G    +      +L          + AA    +   +   E +L++     P 
Sbjct: 539 AENCVSQGAYECARTVYNHALATFPGKKSIWLRAAHLEKNHGTRESLEGLLQRAVAHCPK 598

Query: 293 PEIANIYTH----LLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAK 347
            EI  +       L  +    +    L L  + N  S E  +   K+  E    ++A   
Sbjct: 599 SEILWLMGAKSKWLAGDVPAAR--GILALAFQANPNSEEIWLAAVKLESENREYERARRL 656

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              A   AP   + +  A++E +  ++          AL   PD
Sbjct: 657 LAKARGSAPTPRVMMKSAKLEWS-LNDLKAAQNLLDEALKVFPD 699


>gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
 gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
          Length = 973

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 5/126 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +   ++  Y+ A       +Q    P       Y L     ++ DL SA     K LD+
Sbjct: 283 ARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDV 342

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+     + V   ++      +A+    +  K +       A + I   L + D    +
Sbjct: 343 HPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSP--RDVDAWIEIGELLVSTDFSAAL 400

Query: 244 ASYHDA 249
            ++  A
Sbjct: 401 DAFKTA 406


>gi|302913221|ref|XP_003050871.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731809|gb|EEU45158.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 927

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 78/209 (37%), Gaps = 16/209 (7%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+    +A + +P+   +  A V+         +A   L   ++ A 
Sbjct: 602 LAKEKWQAGEVDNARLVLKRAFNQNPNNEDIWLAAVKLESENGNAEQARKLLEIAREQAP 661

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                   ++  R L     G++ A+    +++L+L   +    +   +      K  +A
Sbjct: 662 TDRVWMKSVVFERVL-----GNVEAALDLVLQALQLFPAAAKLWMLKGQIYGDLGKLGQA 716

Query: 280 ----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN---KESVESLVIVS 332
                  ++ + K  P   +  +Y  L  EN    +K    L+       ++ +      
Sbjct: 717 REAYATGVKAVPKSVP---LWLLYARLE-ENAGLTVKARSVLDRARLAVPKNAQLWCESV 772

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           ++    G++ QA +    A +  P+  + 
Sbjct: 773 RLERRAGNLAQAKSMMAKAQQEVPKSGLL 801



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 20/238 (8%)

Query: 162 FESCRIGDLNSAQRYATKALDIS--PDAPWVTEAVVQQY--VLAKEWSRAITFLNQKKKN 217
             S   G   +A+     AL +       W+  A +++        W      L +  + 
Sbjct: 536 RASINRGKYETARAIYAYALRVFVNSKTMWMAAADLERNHGSRESLW----QVLEKAVEA 591

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +      +L    + E    G++  +      +     N+    + A K         
Sbjct: 592 CPKSEDLWMML----AKEKWQAGEVDNARLVLKRAFNQNPNNEDIWLAAVKLESENGNAE 647

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSK 333
           +A  +LE   +  P   +      ++ E  +G ++ AL L     ++   + +  ++  +
Sbjct: 648 QARKLLEIAREQAPTDRVW--MKSVVFERVLGNVEAALDLVLQALQLFPAAAKLWMLKGQ 705

Query: 334 IALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           I  ++G + QA       +K  P    ++LL A++E+ N+  T K       A  A+P
Sbjct: 706 IYGDLGKLGQAREAYATGVKAVPKSVPLWLLYARLEE-NAGLTVKARSVLDRARLAVP 762


>gi|322421485|ref|YP_004200708.1| CheR-type MCP methyltransferase [Geobacter sp. M18]
 gi|320127872|gb|ADW15432.1| MCP methyltransferase, CheR-type [Geobacter sp. M18]
          Length = 497

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G    A    T+ L +  +       + + +    + + A+   ++        +R  
Sbjct: 346 ERGAYGEAVEMVTEQLALDQNDTDALALLCRIHANEGKLAAALDASDRALA----ADRLS 401

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A L   R++   ++G    +     ++L L  + ++A    A     Q K R+++     
Sbjct: 402 AGLHYLRAVILQEQGVDDEAAASLKKALYLDQDLVLAHFTLANLEKRQGKVRESQR---- 457

Query: 286 IWKVNPHPEIANI--YT--HLLSEN---TVGKLKRALRLEEINK 322
               + H  +A +  Y+   ++  +   + G+LK  +R      
Sbjct: 458 ----HFHNALALLDKYSPDEVIPGSDGMSAGRLKEIIRAANARP 497


>gi|212635296|ref|YP_002311821.1| tetratricopeptide repeat-containing protein [Shewanella
           piezotolerans WP3]
 gi|212556780|gb|ACJ29234.1| N-acetylglucosaminyl transferase, putative [Shewanella
           piezotolerans WP3]
          Length = 386

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 85/250 (34%), Gaps = 32/250 (12%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + +    + ++  P      R+ A+  L  +    G  + A+      ++    +  
Sbjct: 83  GEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVNQEDHSEE 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y + K+W +AI  + + K+K  +    + A      + E+AD          
Sbjct: 143 AETQLIAIYQVTKDWQKAIDIIKKLKRKRQQVLKHDSAHFYCELAAESADDA---IKLKR 199

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
            + + K+  +   A +  A+  +     +  +  +EK         + N    L  ++ +
Sbjct: 200 LLSANKIDPSCGRALLTLAELYLKLEDFKSCKQYIEK---------LLNTDIDLFPDS-L 249

Query: 309 GKLKRALRLEEINKESVE-------------SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
              K+   L + N    E               V +++  +  G+   A    +  +   
Sbjct: 250 PIAKQVYLLTDDNFGYQELLREAIEKGAGASIAVTLAQHMISQGNEKDAEKLILEGLIRH 309

Query: 356 PRKEIFL-LL 364
           P  + F  L+
Sbjct: 310 PTMKSFQHLM 319


>gi|170730497|ref|YP_001775930.1| hypothetical protein Xfasm12_1370 [Xylella fastidiosa M12]
 gi|167965290|gb|ACA12300.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 690

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 12/227 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G L+ A++ +  A  I  D P +        +   +  +A+  L+Q  +   E   
Sbjct: 110 AIARGALDEAEQLSRTAARIISDHPQLLAVNATIALRRGQVDQALAMLSQAVELLPE--- 166

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               +L +       KG +  +       ++L  + I      A+    Q +   A  IL
Sbjct: 167 -EPAVLFSLGFAYLQKGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRIL 225

Query: 284 EKIWKVNP--HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           E+   +     P +  +     LL+ N    L    ++     E   +L  +     ++ 
Sbjct: 226 EEALSLTEGDTPALHRLTGEFELLAGNPDRALPHLRQVLATWPEDPRTLEALLTAWKQLD 285

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD---KILYWTQ 383
             D A      A+ I PR     L A++  A   + +    I  W  
Sbjct: 286 MDDDARVTLDAALDIKPRNHDLWL-ARLAVAPVGSDEARIVIERWLS 331



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 32/296 (10%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++    +  A  M S          E  V        L +     A    + ++++   
Sbjct: 143 IALRRGQVDQALAMLSQAV--ELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVIELNP- 199

Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITF 210
               V +L  + + R G L+ A R   +AL +   D P +     +  +LA    RA+  
Sbjct: 200 HVIPVRALIAQLAQRQGRLDDALRILEEALSLTEGDTPALHRLTGEFELLAGNPDRALPH 259

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L Q      E  R    LL A    + D  D   +   A++      +        A+  
Sbjct: 260 LRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKPRNHDL-----WLARLA 313

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESL 328
           ++     +A +++E+             +   + E+          L  ++  + + E+ 
Sbjct: 314 VAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQNNPEAA 356

Query: 329 VIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++  +A+E G +          ++  P   +  L   IE    H    +  W 
Sbjct: 357 ETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVTCLQQLIESVPEHERTILRPWL 412


>gi|220904712|ref|YP_002480024.1| hypothetical protein Ddes_1444 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869011|gb|ACL49346.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 581

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 78/241 (32%), Gaps = 18/241 (7%)

Query: 160 LYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           LY E+    G            L   PD+      +    V +KE++ A + LN      
Sbjct: 136 LYAEALMEQGTPERGVELMRTYLAKHPDSLDARLELALLLVKSKEYTEAESLLNS----- 190

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                   ++    +           +     +++K   + + A    A     + + + 
Sbjct: 191 VTAKERTPLVDYYHARALIGMDKQAEAIPYLQKAIKEMPDFVEAMAELAFIHEQRAELKS 250

Query: 279 AEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A  + EK+ K N  P+   +  I   L        LK   +      +++   + V+ + 
Sbjct: 251 ARNLYEKLLKFNFSPQDVLLRLINLSLRMNQPEKALKYMRQ----GPDTIPFKLTVAGLF 306

Query: 336 LEMGSIDQAHAKAML-AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS----ALHAMP 390
           ++     QA +     A K     +++LLLA +     H+    L W       +  A  
Sbjct: 307 IDSRHYLQAESLLKQIAAKDDAPVDVYLLLADLTYEQRHDLPLALSWLDRIPPQSKAAPR 366

Query: 391 D 391
            
Sbjct: 367 G 367


>gi|149173184|ref|ZP_01851815.1| hypothetical protein PM8797T_28379 [Planctomyces maris DSM 8797]
 gi|148847990|gb|EDL62322.1| hypothetical protein PM8797T_28379 [Planctomyces maris DSM 8797]
          Length = 339

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 49/134 (36%), Gaps = 17/134 (12%)

Query: 200 LAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              E+++A     +   +     ++  N A+++         +G++  +      +L+L 
Sbjct: 45  QRGEYAKARESFTRAIADNPGNPDYVHNLAVVM-------EKEGNLAGAEQTYQNALRLD 97

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTHLLSENTVGKL 311
            +   +    A+ +ISQ ++++A   +   W+    P IA       +    S +  G  
Sbjct: 98  PSHQPSHHGLAELMISQGRQQEAVQHI-TAWRDT-QPYIAESHLEMAWLLEQSGDINGAE 155

Query: 312 KRALRLEEINKESV 325
           +       ++    
Sbjct: 156 QSLKAAANVDPNHP 169



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 47/148 (31%), Gaps = 4/148 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                AR+  +     +  + +Y+  L    +   E     A +  +  L++  + + + 
Sbjct: 47  GEYAKARESFTRAIADNPGNPDYVHNL--AVVMEKEGNLAGAEQTYQNALRLDPSHQPSH 104

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           + L       G    A ++ T   D  P        +      + + + A   L  K   
Sbjct: 105 HGLAELMISQGRQQEAVQHITAWRDTQPYIAESHLEMAWLLEQSGDINGAEQSL--KAAA 162

Query: 218 AKEWNRNRAILLIARSLENADKGDMIAS 245
             + N  + +  + +  +   + +   +
Sbjct: 163 NVDPNHPKVLAHLGQVYQQTGRSEEAIA 190


>gi|307329776|ref|ZP_07608932.1| Tetratricopeptide TPR_2 repeat protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306884616|gb|EFN15646.1| Tetratricopeptide TPR_2 repeat protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 441

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 79/227 (34%), Gaps = 13/227 (5%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A + A KA  + P  P V   +     L  + + A   L + + ++     + A 
Sbjct: 161 GRYQDAYKAAKKADSLRPGIP-VFTRLGYVLELRGDPAGARRVLLRAQ-DSATSPSDIAY 218

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +  A      ++G+   +      +L+     + A     ++ ++  +++     LE + 
Sbjct: 219 VSAALGQLAWNQGEYDTARRAYSTALRAVPGYLPALEGRGRTSVADGRQKAGIRDLEAVV 278

Query: 288 KVNPHP----EIANIYTHLLSENTVGKLKRALR---LEEINKESVESLVIVSKIALEMGS 340
           +  P P     +   Y     + ++ + + ++    +       V + +  + +A + G 
Sbjct: 279 RRYPLPAELAALGEAY-EARGDRSLARRQYSVVGTWITLARANGVATDLDSALVAADHGE 337

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKILYWTQSAL 386
           + +A   A               LA  + +  +   +K   + + A 
Sbjct: 338 VKEALEAARAEWDRRRTVHTADALAWALHR--NGEDEKAREYAERAA 382


>gi|297823015|ref|XP_002879390.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325229|gb|EFH55649.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 800

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  L   +    +W      + +   +    +G ++++     E+  LC     A     
Sbjct: 289 LLALEAAESGGNQWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLG 348

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +L    + R A   LE+   + P     H ++A+   H + E+    ++   R  ++  
Sbjct: 349 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHAMGEDERA-IEVFQRAIDLKP 406

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++L  +  + +++G   +A       + + P      L   +    +  T++     
Sbjct: 407 GHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRAL 466

Query: 383 QSALH 387
           + AL 
Sbjct: 467 KEALK 471



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              RA+ L+  +L     G+  A+     E++ L  +   A    A SL +  +  +A  
Sbjct: 339 THYRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIE 396

Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331
           + ++   + P H +    +  +Y  L      G+ +RA       L         + +  
Sbjct: 397 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNK 449

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   L  G  ++A      A+K+  R
Sbjct: 450 AVSLLGAGETEEAKRALKEALKMTNR 475


>gi|912469|gb|AAB18507.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
          Length = 1165

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/352 (11%), Positives = 99/352 (28%), Gaps = 68/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 361 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 418

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 419 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 478

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 479 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 538

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +         L + 
Sbjct: 539 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---------LETA 589

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
           N+ R++    E        P    ++    +     + T  +      L      + +++
Sbjct: 590 NRLRESGKEAEAEVLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 648

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 649 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 700



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 4/154 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           R+       +            L     A   R Y  A    + +L        A+  L 
Sbjct: 593 RESGKEAEAEVLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGLT 652

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAK 219
                 GD  +A+    K       +      V        + + A    N+   +  ++
Sbjct: 653 EVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKSQ 712

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +   A++L   +   A  GD   +     +++
Sbjct: 713 PPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 746



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               Q+K+ A    R RA     + L   D G    +  +  ++++       A     +
Sbjct: 266 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 320

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315
           +   +  +  A   LEK   ++PH         +  +   +  +   +   K     RA 
Sbjct: 321 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 380

Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           RL  +  N ++ +S   + +  +A+       A       +++ 
Sbjct: 381 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 424


>gi|134106111|ref|XP_778066.1| hypothetical protein CNBA0690 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260769|gb|EAL23419.1| hypothetical protein CNBA0690 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 942

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 32/268 (11%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD+  AQ    +A   + D+  +  A  +      E   AI  L + K  A   
Sbjct: 620 KEKWVGGDIPGAQAILAEAFKQNEDSESIFLAAAKLAAETGEMEAAIQILEKAKAQADTE 679

Query: 222 NRNRAILLIARSLENADKG-----------------------------DMIASYHDAIES 252
                  ++ R L   D+                              ++  + +   + 
Sbjct: 680 RVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRGQIYESRNEVALARNAYAQG 739

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            + C  SI   I +A+         KA  +LEK    NP  +     +  + E T    +
Sbjct: 740 CRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKNDELWAESIKIEERTGSPQQ 799

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
               L    +E   S ++ S +A+ M +  Q   +++ A+K A      +L       + 
Sbjct: 800 AKSVLARAMQECPASPLLWS-MAIFMETPQQRKGRSVDAIKKAGEHPAVILAVARNFWSE 858

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGY 400
              +K   W  +A+ A  D  W    GY
Sbjct: 859 RKIEKTRQWMANAITA--DEDWGDAWGY 884


>gi|168022875|ref|XP_001763964.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684703|gb|EDQ71103.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 684

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 102/340 (30%), Gaps = 48/340 (14%)

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115
           ++     RF L    +L          + +     G++     + P A  +         
Sbjct: 129 VVSLYCWRFKLKAKKLL-RAPAGCKNIRAFSLRSRGVIKFMMKDYPGA--LADLNKADSL 185

Query: 116 FHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
             N   +  L   +      Y  A ++        P      + +L      +GD   A 
Sbjct: 186 DPNNSFILQLRGDVKCWMNDYEGALNDLSRANRLRPDDTFT-LRALGAAKSALGDRRGAL 244

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIA 231
           +    A  + P+  W      +      +++ A+  L+   +      +  R R ++   
Sbjct: 245 QVLNAANRLQPNDMWTLRLRGRVKRYLHDYAGALVDLDAADRIEPNDLDVLRVRGVV--- 301

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 +  D   +  D  ++ ++   S       A   +   K  +A + ++K      
Sbjct: 302 ----KFNLCDFEGALIDLNKAHRMEPKSSSILRYRADVQLRAGKLDQALIDVKKA----- 352

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                     +  ++T G L R                   ++  +M     A A    A
Sbjct: 353 ----------MELDSTSGSLYRIR----------------GEVKFQMKEFPAALADLNKA 386

Query: 352 MKIAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMP 390
           +++ P   +  L A+ E      + ++ L   Q+A  AM 
Sbjct: 387 LEMQPDD-VCGLRARGELLYEMGDYEEALTDLQAADRAMR 425


>gi|217969861|ref|YP_002355095.1| HemY domain protein [Thauera sp. MZ1T]
 gi|217507188|gb|ACK54199.1| HemY domain protein [Thauera sp. MZ1T]
          Length = 397

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 52/412 (12%), Positives = 122/412 (29%), Gaps = 52/412 (12%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           +R + +   I  +     +++      V +       + S  + + +L   +    LL  
Sbjct: 1   MRALIWLIGIFALAVGVTMLAGVNDGYVLVVLSPWRAQVSLNLFIVVLVVGVALIHLLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +    +  P  +     +R  DK  +AL+  + ++       A K  S  +         
Sbjct: 61  MVTRTVQLPGRVARWRERRRRDKADRALHGSVTALFEGRYSEALK--SASTAYSASDGSP 118

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATK 179
           +                 A     +      TR          +   G +   A+     
Sbjct: 119 MAA------------LVAARAAYGL---QDDTR---YREWLDHAAEQGKESEVARLMTEA 160

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----------KKNAKEWNRNRAILL 229
            L I      +  A + Q     +   A+  L  K            N     R    L 
Sbjct: 161 ELAIDARQFELAAARLAQLRETGQKHIAMLRLESKVAYELGRWEELVNNVRQLRKHKALT 220

Query: 230 IARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQ------------NK 275
             ++     +  +        ++  L      I +   A + LI +            + 
Sbjct: 221 AEQAAPALRRAHVERMRQLVGDASALLGYWQEIPSEELADRGLIKEVLPLMARAGQAMHM 280

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333
           + + E +L++ W      ++A +Y    +  ++T   L +A    E        L  + +
Sbjct: 281 RAQTETLLDEQWDS----DLARLYASCANTMDDTNACLHKAEAWLEKQPRDAGLLFALGQ 336

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +   +    +A +    ++ + P+    L LA + +      +   ++  +A
Sbjct: 337 LCRRVELWGKAQSYLEASLSVDPQVGTHLALAHLFETLERRDESQRHYRAAA 388


>gi|209529687|ref|NP_001129330.1| transmembrane and TPR repeat-containing protein 3 [Rattus
           norvegicus]
 gi|149067073|gb|EDM16806.1| transmembrane and tetratricopeptide repeat containing 3
           (predicted), isoform CRA_a [Rattus norvegicus]
 gi|149067074|gb|EDM16807.1| transmembrane and tetratricopeptide repeat containing 3
           (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 920

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 18/195 (9%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 517 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 576

Query: 269 SLISQNKKRKAEVILEKI----------WKVNPHPEIANIYTHL-LSENTVGKLKRALRL 317
            L+  NK  KA+    K           W       +A +Y  L   +  +    RAL L
Sbjct: 577 LLLKMNKPLKAKEAYLKALELDRNNADLWYN-----LAIVYIELKEPDEALKNFNRALEL 631

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376
              +K ++ +  I+ + + E+    +A  + +  +   P     +  L  +   +  +++
Sbjct: 632 NSRHKLALFNSAILMQESGEVKLRPEARKRLLNYINEEPQDANGYFNLGMLAMDDKKDSE 691

Query: 377 KILYWTQSALHAMPD 391
               W + A+   PD
Sbjct: 692 -AETWMKRAIKLQPD 705


>gi|302142595|emb|CBI19798.3| unnamed protein product [Vitis vinifera]
          Length = 778

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 11/191 (5%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCDNSIM 261
            A        + A+      A LL        +    +G ++++     E+  LC     
Sbjct: 227 EAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGMVMSACEHYREAAILCPTHFR 286

Query: 262 ASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           A      +L    + R A   LE     K    + H ++A+   H + E     +    +
Sbjct: 287 ALKLLGSALFGVGEYRAAVKALEEAIFMKADYADAHCDLASA-LHAMGEGEKA-IPVFQK 344

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
             ++    V++L  +  + ++MG   +A       + + P      L   +    +   +
Sbjct: 345 AIDLKPGHVDALYNLGGLYMDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAE 404

Query: 377 KILYWTQSALH 387
           +     + AL 
Sbjct: 405 EAKKALKEALK 415


>gi|255075899|ref|XP_002501624.1| predicted protein [Micromonas sp. RCC299]
 gi|226516888|gb|ACO62882.1| predicted protein [Micromonas sp. RCC299]
          Length = 329

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 15/224 (6%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
           H+R   +G + L  G + +A      A +  +          E          A  + + 
Sbjct: 55  HRRATQRGDQMLKLGRLEVAEACYLGALRQKNDFPMALYGLGEVHTR------AEDDDRV 108

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           ++A    ++ L+       A  +L     R    + A    TKAL+++P      EA+ +
Sbjct: 109 DLAESAYKLALENWPQYVDAYIALGDLHERRERNDDAVAAYTKALEVAPGDVMAWEALGR 168

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL--------IARSLENADKGDM-IASYH 247
            ++   ++ +A     +    A     +  ++L            LE A+     +    
Sbjct: 169 HHLATSDFDKAKESYEKALTTATNGESSPGLILGLAKAAWGAGSKLEGAEATKKFVECVS 228

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            A ++  L  +   A+    K      + +KA  +L +  +++P
Sbjct: 229 HAEKATNLAPDFGQAAHWNGKCRTHLKQTKKATELLFRAVELDP 272


>gi|242784767|ref|XP_002480459.1| DnaJ and TPR domain protein [Talaromyces stipitatus ATCC 10500]
 gi|218720606|gb|EED20025.1| DnaJ and TPR domain protein [Talaromyces stipitatus ATCC 10500]
          Length = 691

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 28/182 (15%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATR--EFAVYSLYFESCRIGD 169
               + +    LL  +    +   + A +   M LQ  P  +     +  +        +
Sbjct: 377 LRENNQDPDALLLRAKAYYGQGDNDQAVKYTRMSLQLDPDNKKAFTLLRLVQRLVRTKEE 436

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            N+A +                         AK++ RA+    Q  +         + LL
Sbjct: 437 GNAAFK-------------------------AKDYKRAVELYTQGLEIDPTNKDTNSKLL 471

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             R+  +    D   +  D  E+L+L    I A    AK+  +     +A    + + + 
Sbjct: 472 QNRAQAHIALKDYEKAIEDCTEALRLDPGYIKAQKIRAKAHGAAGNWEEAIKDYKNVAET 531

Query: 290 NP 291
           NP
Sbjct: 532 NP 533



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 29/237 (12%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +  Y  A ++    L++       + +             A   A +AL++ P+   +  
Sbjct: 212 QGDYQRAIQEYNKALEVNPNSSIFLSNRAAAFLSANRFIEALDDAQRALELDPENSKIMH 271

Query: 193 AVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
            + +        + A+  L++ +         N    +  I ++ ++ + G   +    A
Sbjct: 272 RLARILTSLGRPADALDVLSKVQPPASAKDRANAEAMLRHITQAEDSLNNGKGGSLVVFA 331

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
           IE  K                      RK        W++     +      + +EN  G
Sbjct: 332 IEQAKQM--LGPGV----------KTPRK--------WQLM----LGEAQLKIGNENGFG 367

Query: 310 KLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364
           K    A+ L   N +  ++L++ +K     G  DQA     +++++ P  K+ F LL
Sbjct: 368 KAHDVAISLLRENNQDPDALLLRAKAYYGQGDNDQAVKYTRMSLQLDPDNKKAFTLL 424


>gi|119493196|ref|ZP_01624071.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119452761|gb|EAW33938.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 867

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 92/266 (34%), Gaps = 19/266 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA 156
            +   A        +          +L      L + Q   A       +   P  +   
Sbjct: 398 GDHQKASHCLEKAYELEPEKATPEDHLKLGNTRLQQGQLQAAMSCYRHALRLNP--QLAG 455

Query: 157 VYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y    E  R  GD  +A +   KA ++ P  P   +++ Q     +E   A+       
Sbjct: 456 AYHGIGEIQRLQGDAVNALQSYRKATELEPKQPHFYQSLAQLLAQQEETQEALEI----Y 511

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQ 273
           K   E N N A+           +  +  +     ++++L  N   A+      K L  Q
Sbjct: 512 KKLLELNPNNALAYHQVGEIFKQQWQLKEAVVAYQKAIQLNPN---AASYYSLGKVLAKQ 568

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESL 328
            + ++A  IL +  +++ + + A  Y       L + +T   ++   +  E++  S E+ 
Sbjct: 569 EQWQEAGSILRQAMQLDGNAD-AEAYKCLADALLQTGDTEAAIQAYQKATELDSNSEEAY 627

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++ +  +    + A +    A+++
Sbjct: 628 QKLADLLRDKEQFEDAISAYHRAVEL 653



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 70/199 (35%), Gaps = 19/199 (9%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G++++A R   KAL I P+ P V   +   Y   +   +AI++  Q      ++    A 
Sbjct: 330 GEISAAIRSYEKALAIQPNYPEVHANLGSLYAQQERLEKAISYYQQAITQKPDF----AG 385

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                +    D GD   + H   ++ +L            +  +     R  +  L+   
Sbjct: 386 AYRNVAKIFTDMGDHQKASHCLEKAYELEPEKATP-----EDHLKLGNTRLQQGQLQAAM 440

Query: 288 KVNPH-----PEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
               H     P++A  Y  +     L  + V  L+   +  E+  +       ++++  +
Sbjct: 441 SCYRHALRLNPQLAGAYHGIGEIQRLQGDAVNALQSYRKATELEPKQPHFYQSLAQLLAQ 500

Query: 338 MGSIDQAHAKAMLAMKIAP 356
                +A       +++ P
Sbjct: 501 QEETQEALEIYKKLLELNP 519



 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 75/220 (34%), Gaps = 11/220 (5%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           + M         A   L     + GD  +A +   KA ++  ++    + +       ++
Sbjct: 580 QAMQLDGNADAEAYKCLADALLQTGDTEAAIQAYQKATELDSNSEEAYQKLADLLRDKEQ 639

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  AI+  ++  +   +       +    +           +     ++++L      + 
Sbjct: 640 FEDAISAYHRAVELKADVW----WVHNGLAEVLFKLERWSEAIESYQKAIELNPEFSWSH 695

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRL 317
              A +L+   +  +A +   K  ++NP     H  +  +   L + E  V   + A +L
Sbjct: 696 NSLADALVKLERWEEAVIPYRKATELNPEFPWSHYNLGEVLAKLENWEEAVVAYRNAQKL 755

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +     ++E  +  +     M  +++A       ++  P 
Sbjct: 756 QSDLP-AIEEKLADALRERAMIDLNEALGYYRQVIQQNPD 794



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 9/203 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
               L       A +  +   ++ +  E A   L            A     +A+++  D
Sbjct: 597 ADALLQTGDTEAAIQAYQKATELDSNSEEAYQKLADLLRDKEQFEDAISAYHRAVELKAD 656

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             WV   + +     + WS AI    +  +   E++ +   L  A +L   ++ +   + 
Sbjct: 657 VWWVHNGLAEVLFKLERWSEAIESYQKAIELNPEFSWSHNSL--ADALVKLERWE--EAV 712

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPE--IANIYTH 301
               ++ +L      +     + L       +A V      K+    P  E  +A+    
Sbjct: 713 IPYRKATELNPEFPWSHYNLGEVLAKLENWEEAVVAYRNAQKLQSDLPAIEEKLADALRE 772

Query: 302 LLSENTVGKLKRALRLEEINKES 324
               +    L    ++ + N + 
Sbjct: 773 RAMIDLNEALGYYRQVIQQNPDH 795



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 51/137 (37%), Gaps = 15/137 (10%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           LIA++          A+ +   ++LK+  +  +A      +L    +   A    EK   
Sbjct: 285 LIAKATAFCAIHKWEAAINTCQQALKIQPDLAVAYKIQGNALHLLGEISAAIRSYEKALA 344

Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMG 339
           + P     H  + ++Y          +L++A+   +       +   +   V+KI  +MG
Sbjct: 345 IQPNYPEVHANLGSLYAQ------QERLEKAISYYQQAITQKPDFAGAYRNVAKIFTDMG 398

Query: 340 SIDQAHAKAMLAMKIAP 356
              +A      A ++ P
Sbjct: 399 DHQKASHCLEKAYELEP 415


>gi|321250666|ref|XP_003191883.1| pre-mRNA splicing factor prp1 [Cryptococcus gattii WM276]
 gi|317458351|gb|ADV20096.1| Pre-mRNA splicing factor prp1, putative [Cryptococcus gattii WM276]
          Length = 946

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 32/268 (11%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD+  AQ    +A   + D+  +  A  +      E   AI  L + K  A   
Sbjct: 624 KEKWVGGDIPGAQAILAEAFKANEDSESIFLAAAKLAAETGEMEAAIQILEKAKAQADTE 683

Query: 222 NRNRAILLIARSLENADKG-----------------------------DMIASYHDAIES 252
                  ++ R L   D+                              ++  + +   + 
Sbjct: 684 RVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRGQIYESRNEVALARNAYAQG 743

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            + C  SI   I +A+         KA  +LEK    NP  +     +  + E T    +
Sbjct: 744 CRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKNDELWAESIKIEERTGSTQQ 803

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
               L    +E   S ++ S +A+ M +  Q   +++ A+K A      +L       + 
Sbjct: 804 AKSVLARAMQECPASPLLWS-MAIFMEAPQQRKGRSVDAIKKAGEHPAVILAVARNFWSE 862

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGY 400
              +K   W  +A+ A  D  W    GY
Sbjct: 863 RKIEKTRQWMANAITA--DEDWGDAWGY 888


>gi|146313570|ref|YP_001178644.1| cellulose synthase domain-containing protein [Enterobacter sp. 638]
 gi|145320446|gb|ABP62593.1| cellulose synthase operon C domain protein [Enterobacter sp. 638]
          Length = 1324

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 92/256 (35%), Gaps = 23/256 (8%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL     + A  + E +LQ       A+  + + + R GD  +A +Y  +A     DA 
Sbjct: 269 TALNSGNTDAAKRQFEQVLQTNPQDADALAGMGYIAQRSGDYQAAAQYLGRAASQGGDAS 328

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              +          +       L Q ++  KE N ++A+ L A  ++ + +    A    
Sbjct: 329 TARQTQADDAAFYGQ-------LAQAQQALKEGNVSQALALSAPLVQQSGERGTAAKLFR 381

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV-----ILEKIWKVNPHPEIANIYTHLL 303
           A + L+   +    +    + LI+Q  +  A       +L++  K     E A      L
Sbjct: 382 A-DVLRHNKDY-PQAEQTLRELINQQPQNGAARENLYYVLKEQNKT----EDAQAMLRTL 435

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            E+   KL+   R+              ++ A   G+ +QA       +   P      L
Sbjct: 436 PESLQAKLQ--PRVVAGLPGDPIRR--QAQQAAANGNTEQAIGILRQGIARLPDDPWLRL 491

Query: 364 -LAQIEQANSHNTDKI 378
            LA++ Q +  + +  
Sbjct: 492 DLARLLQKSGADGEAA 507



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 103/347 (29%), Gaps = 36/347 (10%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             + G  A   G  ++ + N   A++    V Q +    + L  +    IA     Y  A
Sbjct: 256 RKNIGGAAKGEGYTALNSGNTDAAKRQFEQVLQTNPQDADALAGM--GYIAQRSGDYQAA 313

Query: 140 HEKLE------------MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
            + L                Q      +   +   ++ + G+++ A   +   +  S + 
Sbjct: 314 AQYLGRAASQGGDASTARQTQADDAAFYGQLAQAQQALKEGNVSQALALSAPLVQQSGER 373

Query: 188 PWVTE-AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIA 244
               +          K++ +A   L +   ++      R     ++    +  D   M+ 
Sbjct: 374 GTAAKLFRADVLRHNKDYPQAEQTLRELINQQPQNGAARENLYYVLKEQNKTEDAQAMLR 433

Query: 245 SYHDAIESLKLCDNSI---MASICA--AKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           +  +++++ KL    +           A+   +     +A  IL +     P  P +   
Sbjct: 434 TLPESLQA-KLQPRVVAGLPGDPIRRQAQQAAANGNTEQAIGILRQGIARLPDDPWLRLD 492

Query: 299 YTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAML--AMKIA 355
              LL ++       A+        +   SL   +  A E G+  Q+             
Sbjct: 493 LARLLQKSGADGEAAAVMQPASRPGAGASSLYAAALFASESGAWQQSQTLLSRVSPASQT 552

Query: 356 PRKEIFLL-------LAQIEQ--ANSHNTDKILYWTQSALHAMPDPL 393
           P+     L       +A  E+  A  ++          +      P 
Sbjct: 553 PQMRELALRVNTNLQMATAERYLAQGNSVAAANTLKTLSARPPESPA 599


>gi|114331039|ref|YP_747261.1| HemY domain-containing protein [Nitrosomonas eutropha C91]
 gi|114308053|gb|ABI59296.1| HemY domain protein [Nitrosomonas eutropha C91]
          Length = 393

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/394 (12%), Positives = 121/394 (30%), Gaps = 31/394 (7%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           ++L+ +   +     + ++ ++Y    V  T        +    + ++      + +L  
Sbjct: 1   MKLVLWVLALFASATAIVLAAYYNTGSVLFTVPPYKIELAFNTFIIMVLSVFTVFYMLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE- 119
           +          +          K  +  ++G+ +         + M            + 
Sbjct: 61  ILSGLSGINRRI-------RAKKAEQLTWSGVRAFF--EARYDQAMEFSEKAFKLADTQT 111

Query: 120 --YLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRY 176
              L  ++  + A  +R Y      L    +  P  R   + +        G  + A   
Sbjct: 112 TKVLNAVVAARSAHQQRNYLRRDHLLTAAREQAPVGRVLTLITEAELFLDEGRYHDALT- 170

Query: 177 ATKALDISPDAPWVTEAVVQQYVL--AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           A +++            +++      A  W   +  L +   N    +R          L
Sbjct: 171 ALQSIYSFGGLQSTAVLLLELKAQQMAGNWDAVLE-LTEVLSNRSSVDRAHV-----DEL 224

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIM--------ASICAAKSLISQNKKRKAEVILEKI 286
            +    + I      I  LK    ++          ++ AA++L++Q     A+ I+E  
Sbjct: 225 RHQAHLENIKKNTKDIVLLKKYWGTLPWQEKTDGRIAVAAARALMAQGDNAAAQKIIENG 284

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                +PE+  +Y    S     +++RA         + + L+ + ++        +A  
Sbjct: 285 LDAGLYPELVALYADCQSGIVSWQIQRAESWLVKYPNNADLLLALGRLCTYGELWGKAQN 344

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
               ++ I P     L LAQ+ +          +
Sbjct: 345 YLEASLSIDPGYPAHLALAQLFEKLGKQEAASEH 378


>gi|300916741|ref|ZP_07133452.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
 gi|300415963|gb|EFJ99273.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
          Length = 1157

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+     ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQSDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738


>gi|223995619|ref|XP_002287483.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana
           CCMP1335]
 gi|220976599|gb|EED94926.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana
           CCMP1335]
          Length = 891

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 103/295 (34%), Gaps = 34/295 (11%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A         IP  +  ++Y L       G++  A ++  KA   SP+       + Q  
Sbjct: 176 AKGAYNA-TNIPEMQAESLYMLARVYHARGEMELANKFYDKACKHSPELSPARFGLAQTL 234

Query: 199 VLAKEWSRA--ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           +    W  A      + +       N   A+  +   LE     D   ++    +++ L 
Sbjct: 235 I----WDEAYDEAAAHLRLLLGTCSNATDALAALGL-LEVKGGKDRREAFIYLKKAIDLD 289

Query: 257 D---NSIMASICA-----AKSLISQNKKRKAEVILEKIWKVNP----------HPEIANI 298
               + ++    A     +  L+S ++ RKA  +LE   K+ P          H  + ++
Sbjct: 290 PFNADLVLIEALALQQNESDYLLSLDRYRKAVRLLEAQQKIVPADVLTNMGALHIHLKSV 349

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357
                 E+ +   K   RL   +  SV     ++++    G I  A       +K  P  
Sbjct: 350 VALNEGESAISVKKSNGRLRNASSISV--AFNLARLHEAAGRIVPAVELHKAIVKRHPSY 407

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYLSS---VWLPL 408
              +L LA I + +  +      W +SA+  A  +P  ++  G L      W P 
Sbjct: 408 VNSYLRLACIAR-DCGSLKDCSEWLKSAVAVAPGNPEVLTLVGNLHLSLCDWAPA 461


>gi|307153350|ref|YP_003888734.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306983578|gb|ADN15459.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 367

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 83/247 (33%), Gaps = 14/247 (5%)

Query: 117 HNEYLVYLL-EVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNS 172
           HNE L  LL + +  +    Y  A    +    + Q        +  LY      G+  +
Sbjct: 39  HNEQLGDLLRQGRQYVDNGNYTEALNLYQQAATLAQDNPKIFSGIGYLYSL---QGNYQA 95

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A R   +AL + P  P    A+      A ++S A T      +   +  ++     I  
Sbjct: 96  AVRAYQQALTLEPSNPEFYYALGYNLAYAGDYSNAATAYYYAMQLEPKNVKH----YIGL 151

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +    + +   +       L L  N+  A      +L+ Q +  +A   L+   +  P 
Sbjct: 152 GVVLLRQKNYDKAIEVYQWVLALDPNNQEAHEIMGVALLEQKRTSEAMSFLQNATEKFPS 211

Query: 293 P---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
               ++      L   N    L     ++ ++  + +  + +  +  +    D+A     
Sbjct: 212 STELKLQLASASLAQGNLDQGLSLLQDVQRLDPNNYKIQLKIGILLEKKERYDEALTAYR 271

Query: 350 LAMKIAP 356
            A  +AP
Sbjct: 272 RASYLAP 278



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 38/257 (14%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQH---TFHNEYLVYLLEVQIALAERQYNIAHE 141
           Y AL  G     A +   A   + Y  Q       H   L  +L  Q     + Y+ A E
Sbjct: 114 YYAL--GYNLAYAGDYSNAATAYYYAMQLEPKNVKHYIGLGVVLLRQ-----KNYDKAIE 166

Query: 142 KLE-MMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             + ++   P  +E      V +L  +       + A  +   A +  P +  +   +  
Sbjct: 167 VYQWVLALDPNNQEAHEIMGV-ALLEQKR----TSEAMSFLQNATEKFPSSTELKLQLAS 221

Query: 197 QYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             +      + ++ L   ++ +   +     I ++    E  D+     +      +  L
Sbjct: 222 ASLAQGNLDQGLSLLQDVQRLDPNNYKIQLKIGILLEKKERYDE-----ALTAYRRASYL 276

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL--------LSEN 306
              SI A+    +  ++Q     A V+ +++ +V P +P+I   Y +L          + 
Sbjct: 277 APKSIEANAGIGRVYLAQKDYLGAIVVYKELAEVAPNNPDI---YYNLGFALKQRERKQE 333

Query: 307 TVGKLKRALRLEEINKE 323
               L++A +L +   +
Sbjct: 334 AKEALEKARQLYQSRND 350


>gi|325106717|ref|YP_004267785.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
 gi|324966985|gb|ADY57763.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
          Length = 1391

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 77/258 (29%), Gaps = 26/258 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---- 153
                A  +           +  L        A +  Q   A +  E +L          
Sbjct: 56  GEHLAA--VEKIERALKLKPDAVLFRKNLASAARSAGQLEKARKSCENVLAAEPNEPVMF 113

Query: 154 -EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAIT 209
                     E        +A+ Y  ++L I  +     E ++     Y      + A  
Sbjct: 114 TLLGRICETEEKW----TEAARHY-EESLRIGLNNSETLETLLHLGDCYSKVGRSTDA-- 166

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  ++  + +      +   + E    G + A+     ++L +  N   A       
Sbjct: 167 --ERCYRDIIDRDPWHLFAVHNLARELQFAGKLAAAESFYEQTLDIDPNCASAWNNLGVV 224

Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
             ++    +A   +EK  ++ P     H  +AN+   L    +  ++    +  ++  + 
Sbjct: 225 YQTRGNFSEARRCMEKARQLLPSLPDVHNNLANVLEALGEAGSCKEM--FEKAIQLRPDY 282

Query: 325 VESLVIVSKIALEMGSID 342
            E+   +S++ L     +
Sbjct: 283 PEAYHSLSQVYLRERDFE 300


>gi|296122109|ref|YP_003629887.1| hypothetical protein Plim_1858 [Planctomyces limnophilus DSM 3776]
 gi|296014449|gb|ADG67688.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
           DSM 3776]
          Length = 326

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 58/204 (28%), Gaps = 12/204 (5%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
             +   +++   Q          A    +  ++       A+  L       G    A+ 
Sbjct: 73  LRDPVRMHVAYGQWNERSGNSKEARASYDEAIEKNPKSVDALLGLARLDILGGRHADAET 132

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              KA   +P    V     Q +    EW+ AI       K A E   +R  L  A +  
Sbjct: 133 LIAKAAKQAPQNAQVRATRGQLFESRGEWALAIEEYRAAVKLAPEETNHRFQLGTALAK- 191

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--P 293
                     Y   +  L     + +A       L  + ++  AE    K  + NP   P
Sbjct: 192 -------SGDYEAGLAELTRVQGAAIAHYNVGYILHEKGERGAAERYFAKALQFNPELKP 244

Query: 294 E--IANIYTHLLSENTVGKLKRAL 315
              I   Y     + +   L R  
Sbjct: 245 AGTILAQYREARGQISADALARME 268


>gi|115660714|ref|XP_784504.2| PREDICTED: similar to UDP-N-acetylglucosaminyltransferase
           [Strongylocentrotus purpuratus]
 gi|115936542|ref|XP_001177116.1| PREDICTED: similar to UDP-N-acetylglucosaminyltransferase
           [Strongylocentrotus purpuratus]
          Length = 1032

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 89/242 (36%), Gaps = 16/242 (6%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL+        + + A       ++       A  +L       G++  A  +  KA
Sbjct: 153 LGNLLKA-----LGRLDEAKACYLKAIETQPNFAVAWSNLGCVFNSQGEIWLAIHHFEKA 207

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P+       +      A+ + RA+    +  + +     N A++    +    ++G
Sbjct: 208 VTLDPNFLDAYINLGNVLKEARIFDRAVGAYLRALQLSP----NHAVVHGNLACVYYEQG 263

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
            +  +      +++L  +   A    A +L  Q K  +AE       ++ P H +  N  
Sbjct: 264 LIDLAIDTYKRAIELQPHFPDAYCNLANALKEQGKVAEAEDCYNTALRLCPTHADSLNNL 323

Query: 300 THLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++  E   G ++ +++L         E   +   ++ +  + G + +A      A++I+
Sbjct: 324 ANIKRE--QGNVEGSIQLYCKALEIFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIS 381

Query: 356 PR 357
           P 
Sbjct: 382 PT 383



 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 76/252 (30%), Gaps = 31/252 (12%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+ +A         + +Y        +    Y         + +   A +     L++
Sbjct: 262 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEQGKVAEAEDCYNTALRL 312

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   ++ +L       G++  + +   KAL+I P+       +        +   A+ 
Sbjct: 313 CPTHADSLNNLANIKREQGNVEGSIQLYCKALEIFPEFAAAHSNLASVLQQQGKLQEALL 372

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  + +  +    A           +  D+  +      ++++      A    A  
Sbjct: 373 HYKEAIRISPTF----ADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASV 428

Query: 270 LISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSE--NTVGKLKRA-------- 314
                   +A        K+ P+ P+    +A+    ++ +  +   ++KR         
Sbjct: 429 HKDSGNIPEAIESYRTALKLKPNFPDAYCNLAH-CLQIVCDWTDYESRMKRLVSIVADQL 487

Query: 315 --LRLEEINKES 324
              RL  ++   
Sbjct: 488 EKNRLPSVHPHH 499


>gi|120610676|ref|YP_970354.1| HemY domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120589140|gb|ABM32580.1| HemY domain protein [Acidovorax citrulli AAC00-1]
          Length = 425

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 51/416 (12%), Positives = 112/416 (26%), Gaps = 44/416 (10%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   + +  +    + + +   +    V++ W       S   +L + +           
Sbjct: 1   MRAALWFLVLFGTAVAAALFAGNNQGTVTLFWPPYRVDLSLNFVLLLFFGGFAILYAALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                L  P        ++     + AL   L  + A     +RK       Q       
Sbjct: 61  ALSALLELPGQARRWRVQQKERSMHAALLDALSQLLAGRFLRSRKAAMAALAQENALEAA 120

Query: 121 ------------LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVY-SLYFE 163
                       L +L+  + + A +        L   L     R    E  +       
Sbjct: 121 GEAVPHGRQLRTLAHLVAAESSHALQDRATREAHLRNALDNIPARAPVSELELREGAQLR 180

Query: 164 SCR----IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           + R      D  +A  +       +        A ++   L+ +   A+       K+  
Sbjct: 181 AARWSLDERDAATALEHLAALPQGAARRTLALRARLKATRLSHQTQEALETARLLGKHRA 240

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNK 275
                   ++   ++E  +     A           + +        +I AA+ L +   
Sbjct: 241 FSPAAAQSIVRGLAIELLNGAHDPAQLQQTWMSFEAAERAMPEL---AIHAAQRLTALGG 297

Query: 276 KRKAEVI-LEKIWK-----VNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKES 324
                   L   W+      NP P+   +    + E+ +       L R    ++ N   
Sbjct: 298 DHGQVRTWLLPAWERMVDAANPLPDAHALKLVRVLESNLDALDAAWLARIESAQQANPRD 357

Query: 325 VESLVIVSKIALEMGSIDQAHA---KAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376
                +     L      +A     +A   +   P R   +  LA++ +    +T+
Sbjct: 358 ARLQYLSGMACLRRQLWGKAQQLFTQAAQQLDEGPLRCRAWRHLAELAE-QRGDTE 412


>gi|159903982|ref|YP_001551326.1| Flp pilus assembly protein TadD [Prochlorococcus marinus str. MIT
           9211]
 gi|159889158|gb|ABX09372.1| Flp pilus assembly protein TadD [Prochlorococcus marinus str. MIT
           9211]
          Length = 594

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 30/157 (19%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----------- 208
           L       G+L  A+ YA KA+ + P+       +        +  +AI           
Sbjct: 98  LALILKEKGELKEAELYARKAISLKPNLCDAYLILGGILQDQGDLDQAILCTRKAIILDP 157

Query: 209 ----------TFLNQK--KKNAKEWNRNRAILLIARSLENA-------DKGDMIASYHDA 249
                       L +K   K A++  R    L    +  +        +KG++  +    
Sbjct: 158 NLASSHLNLGVLLKEKGNLKEAEDATRKAISLQSNLANAHLNLGVLLKEKGNLKEAEDAT 217

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +++ L  N   A +     L    K ++AE  L K 
Sbjct: 218 RKAISLQSNLANAHLNLGILLKDLGKLKEAEKTLIKA 254


>gi|297183434|gb|ADI19566.1| FOG: tpr repeat-protein [uncultured Acidobacteria bacterium
           HF0770_27F21]
          Length = 333

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 54/191 (28%), Gaps = 22/191 (11%)

Query: 126 EVQIALAERQYNIAHEKLEM-MLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDI 183
           E         Y  A  K E  M+  P                  GD+  A+    K L  
Sbjct: 144 EAIALSDAGDYAGAVAKYEEFMVANPHLDAVHGNIG--NAYRDAGDVEKAREAYEKLLAA 201

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDM 242
            PD       + + +V A +   A+ +     +    +      +  +  S +     + 
Sbjct: 202 EPDNVMANYNMGEMFVEAGDMEEALPYFESVLQQNPDDPAVYYNVAELYFSQQVLGCLEP 261

Query: 243 IASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +     AI     +L+   N + A +    +L+       A +  EK             
Sbjct: 262 VPECQGAISYYNRALETDPNYLPAHMQIGFALVRLGDIDNAVLAFEK------------- 308

Query: 299 YTHLLSENTVG 309
           Y  L  E+   
Sbjct: 309 YVELAPEDDAQ 319


>gi|197120101|ref|YP_002140528.1| bifunctional SAM-dependent methyltransferase, type
            11,/glycosyltransferase, family 2, TPR domain-containing
            protein [Geobacter bemidjiensis Bem]
 gi|197089461|gb|ACH40732.1| SAM-dependent methyltransferase, type 11, and glycosyltransferase,
            family 2, TPR domain-containing protein [Geobacter
            bemidjiensis Bem]
          Length = 1523

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 9/136 (6%)

Query: 157  VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            +      + R    ++ +    + +  SP +P    A+      A  W  A+  L Q   
Sbjct: 882  LRG-AKLARRGKLNDAVELMLQEGIRFSPASPAPYLALAGILCEAGNWREALEVLEQ--- 937

Query: 217  NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNK 275
                     A L+  R+ +  + G+   +   A ++  +       ++       +SQ +
Sbjct: 938  -VPAGCELDAALMRGRAFK--ESGEPAQAVEAAKQAEGIDPE-APGTLHLNGVLALSQGE 993

Query: 276  KRKAEVILEKIWKVNP 291
              K E +L +    +P
Sbjct: 994  AEKGEELLRRAITADP 1009



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 294  EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            E+A   T L       +L    RL +++ E+ E+ + +  + L  G   +A   A+   +
Sbjct: 1357 ELARQATELDRGEEAQRL--WHRLLQVHPENAEAYLNLGYLQLNAGEYPKARESALKGAQ 1414

Query: 354  IAP 356
            +AP
Sbjct: 1415 LAP 1417


>gi|302665320|ref|XP_003024272.1| hypothetical protein TRV_01623 [Trichophyton verrucosum HKI 0517]
 gi|291188319|gb|EFE43661.1| hypothetical protein TRV_01623 [Trichophyton verrucosum HKI 0517]
          Length = 739

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183
           ++Y  A    +  L   P ++  A+ S Y    +  GD         +  +    + L  
Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQLKE 316

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237
           +P    +   + +    + +  R      +        +  + W R   + +     E  
Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376

Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +  D   +     E LKL            +  A+  I Q     A   L +   + P  
Sbjct: 377 ENEDAERARQIYTECLKLIPHKKFTFAKIWLLKAEFEIRQLDLVLARKTLGQAIGMCPKD 436

Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           ++   Y  +     E +  + K   +  + N    ES +  +++   +  +++A A   L
Sbjct: 437 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 495

Query: 351 AM 352
            +
Sbjct: 496 GI 497


>gi|317154776|ref|YP_004122824.1| tetratricopeptide domain-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316945027|gb|ADU64078.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 506

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 53/134 (39%), Gaps = 8/134 (5%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           R     D G+  A+       L L  +     +    +L+   +  KA        +  P
Sbjct: 152 RCASLLDAGEYDAALEVTDRILLLKPDCAPGLVMRGDALMGIGEADKAVQAYMAAHESRP 211

Query: 292 ---HP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               P  ++A  +  +  E  +  +K    L+EI+  + E  + +++  L+    ++A A
Sbjct: 212 IFMAPLIKLAAAFDRMEDERALAYMK---ELDEISPLNPERKIELARQHLQRDETEKAEA 268

Query: 347 KAMLAMKIAPRKEI 360
               ++++A R+ +
Sbjct: 269 YLTESVELAEREHL 282


>gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
          Length = 788

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 7/165 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +   ++  Y  A       ++    P       Y L     ++GD  S+     K L++
Sbjct: 312 ARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEV 371

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+     +A+   YV   +  +A  +L +  K   +    +A L +   L  +D G  +
Sbjct: 372 YPENCEALKALGHIYVQLGQTEKAQEYLRKATK--IDPRDAQAFLDLGELLITSDTGAAL 429

Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286
            ++  A   LK     +   +          + +   AE   ++ 
Sbjct: 430 DAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEA 474



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 88/302 (29%), Gaps = 51/302 (16%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
           Y        +E   ++ + Q+ LA+     A    +++L        A+          G
Sbjct: 117 YNKASRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRG 176

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKNAKEWNRNRAI 227
             + +     +AL + PD P      +        ++ +A     +  +   E N    +
Sbjct: 177 RYSDSLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPE-NVEALV 235

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----------------------SIC 265
            L    L   D   +         + ++     MA                      +  
Sbjct: 236 ALGIMDLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295

Query: 266 A---------------AKSLISQNKKRKA-----EVILEKIWKVNPH----PEIANIYTH 301
           A               A+S  S+    KA       + E      PH    P        
Sbjct: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKES---NKPHDFVLPYYGLGQVQ 352

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           L   +    L    ++ E+  E+ E+L  +  I +++G  ++A      A KI PR    
Sbjct: 353 LKLGDFRSSLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQA 412

Query: 362 LL 363
            L
Sbjct: 413 FL 414


>gi|15228944|ref|NP_188329.1| HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107); binding [Arabidopsis
           thaliana]
 gi|20260426|gb|AAM13111.1| unknown protein [Arabidopsis thaliana]
 gi|30725484|gb|AAP37764.1| At3g17040 [Arabidopsis thaliana]
 gi|332642376|gb|AEE75897.1| protein high chlorophyll fluorescent 107 [Arabidopsis thaliana]
          Length = 652

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 18/267 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            NI  AR + +   +     NEY+     LLE +      +Y  A    +      +   
Sbjct: 285 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKA----GRYEQARYLFKQATICNSRSC 339

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +  +      +     +A++   KA+  SP   +                R    L   
Sbjct: 340 ASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL--- 396

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K     N    +LL +  L          +      + +L        I        + 
Sbjct: 397 -KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWKEG 455

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328
               A  + ++   ++ + E A+         E   G L  A RL      IN +S  + 
Sbjct: 456 NTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTW 515

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +  +++  + G  ++A     L  +  
Sbjct: 516 MTWAQLEEDQGDTERAEEIRNLYFQQR 542


>gi|325181098|emb|CCA15510.1| anaphasepromoting complex subunit putative [Albugo laibachii Nc14]
          Length = 307

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 78/212 (36%), Gaps = 8/212 (3%)

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            A KA D++  AP    A    + L  E   A++F  +  +    +             E
Sbjct: 69  LAQKATDLNKLAPEAWCAAGNCFSLHGEHDIALSFFQRAIQLNSAF----VYAYTLSGHE 124

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
                D   + +    ++++      A          Q K   A    E+  ++NP+  +
Sbjct: 125 YVANEDYEKAANCYRHAIRVDPRHYNAWYGLGTICYRQEKYEFARYHFERALQINPNSSM 184

Query: 296 ANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +    ++  +       L++     ++   ++++ +  + + +       A    +   
Sbjct: 185 LHYLVGVVMHSMKRYNEALQKLKVAIDLQPLNLQARIQRANVLISQEQFHAARDDLLDVR 244

Query: 353 KIAPRK-EIFLLLAQIEQANSHNTDKILYWTQ 383
            +AP++  I+ LL Q+ +  ++  + + Y+T+
Sbjct: 245 DLAPQESSIYYLLGQVSKKLNNMDEAMQYYTK 276



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 50/162 (30%), Gaps = 4/162 (2%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L     +A   Y  A       +++      A Y L     R      A+ +  +AL I+
Sbjct: 120 LSGHEYVANEDYEKAANCYRHAIRVDPRHYNAWYGLGTICYRQEKYEFARYHFERALQIN 179

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P++  +   V       K ++ A+    QK K A +         I R+     +    A
Sbjct: 180 PNSSMLHYLVGVVMHSMKRYNEAL----QKLKVAIDLQPLNLQARIQRANVLISQEQFHA 235

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  D ++   L            +     N   +A     K 
Sbjct: 236 ARDDLLDVRDLAPQESSIYYLLGQVSKKLNNMDEAMQYYTKA 277


>gi|226226818|ref|YP_002760924.1| hypothetical protein GAU_1412 [Gemmatimonas aurantiaca T-27]
 gi|226090009|dbj|BAH38454.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 561

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 56/205 (27%), Gaps = 9/205 (4%)

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKG-----YKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
            A     L         L +     G       AL     ++   ++  A    +    Q
Sbjct: 323 LAFCTARLGDIGQAKRHLDEATRRAGAQPDPRIALTAAQFALTDGDMAEAEVQLARARAQ 382

Query: 114 HTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
                    +  L    A    +   A   LE  L           +L     R G   +
Sbjct: 383 WGARQPSAAWFHLAGLAAAIGGESARAQALLEEGLTAHPHAAPLHNNLAVVQERRGSYEA 442

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A R A  AL    ++  + + +       + +  A   L +  + A     +   + +  
Sbjct: 443 AARTAEHALLEDANSAHLHKNLGDYLYRGQRYDEAFDALTRVVRLAPNHGPD---VYLKL 499

Query: 233 SLENADKGDMIASYHDAIESLKLCD 257
              +  +G +  +     ++L L  
Sbjct: 500 GNVHYRRGALDDARAAWEQALALDP 524



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 11/203 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+GD+  A+R+  +A   +   P    A+        +   A   +   +  A+   R  
Sbjct: 329 RLGDIGQAKRHLDEATRRAGAQPDPRIALTAAQFALTDGDMAEAEVQLARARAQWGARQP 388

Query: 226 AILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV--- 281
           +      + L  A  G+   +     E L    ++       A     +     A     
Sbjct: 389 SAAWFHLAGLAAAIGGESARAQALLEEGLTAHPHAAPLHNNLAVVQERRGSYEAAARTAE 448

Query: 282 --ILEKIWKVNPHPEIAN-IYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALE 337
             +LE     + H  + + +Y     +     L R +RL         +  + +  +   
Sbjct: 449 HALLEDANSAHLHKNLGDYLYRGQRYDEAFDALTRVVRLA---PNHGPDVYLKLGNVHYR 505

Query: 338 MGSIDQAHAKAMLAMKIAPRKEI 360
            G++D A A    A+ + P   I
Sbjct: 506 RGALDDARAAWEQALALDPENRI 528



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 56/212 (26%), Gaps = 17/212 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-----LQIPAT 152
            +I  A++     +++     +  + L   Q AL +     A  +L         + P+ 
Sbjct: 331 GDIGQAKRHLDEATRRAGAQPDPRIALTAAQFALTDGDMAEAEVQLARARAQWGARQPSA 390

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             F +  L   +   G+   AQ    + L   P A  +   +         +  A     
Sbjct: 391 AWFHLAGLA--AAIGGESARAQALLEEGLTAHPHAAPLHNNLAVVQERRGSYEAAARTAE 448

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLI 271
                        A L                ++      ++L  N              
Sbjct: 449 HALLEDANS----AHLHKNLGDYLYRGQRYDEAFDALTRVVRLAPNHGPDVYLKLGNVHY 504

Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANI 298
            +     A    E+   ++P     H  +A +
Sbjct: 505 RRGALDDARAAWEQALALDPENRIVHANLAAL 536


>gi|168702395|ref|ZP_02734672.1| TPR domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 1992

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 53/340 (15%)

Query: 95   IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATR 153
            +A  +   A + H   + Q   H      LL+ +           A   L  +L +    
Sbjct: 823  LAETDGRGAARAHLTQACQRFPHYYP---LLKFRAEFLSGDPEGDAERALRDLLDVCPDD 879

Query: 154  EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             +A+            L+ A  +A +A ++ P+  W    + Q +  A   + A   +  
Sbjct: 880  AWALRQRALVCADRKRLDEALAHAVRAGELEPNHVWYHSVLAQVHKRADRTAEAAEAIRA 939

Query: 214  KKK---------------NAKEWNRNRAILLIARSL----------------------EN 236
              +                     +  A+  I   L                       N
Sbjct: 940  GLRLNIDQEPQIAELVQLARGRREKRDALEFIEAELRRQPHTGEGLIAFVGVSHHVFQGN 999

Query: 237  ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +D  D         + L    +   A    A+ L    +  +A  +  +   V+  P + 
Sbjct: 1000 SDPEDHTRLLETLEQILDDRPDLWHAWSAVAQQLTGLGRLDEAHALAREA--VDRFPLLG 1057

Query: 297  NIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             ++  L        N  G+L    +   ++     +   +++   +    D A A    A
Sbjct: 1058 KLWLDLAQVCHALGNADGRLDALRQAVAVSPGWSLAARELAEALDDADQRDDAIAVLERA 1117

Query: 352  MKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                P        LA+       +  +       A  A+ 
Sbjct: 1118 TVRNPTDALAHGFLAE----RLWDEGRSREALDRAKTAVR 1153



 Score = 39.9 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 91/299 (30%), Gaps = 17/299 (5%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA------T 152
            +             +     E  +  L  Q+A   R+   A E +E  L+          
Sbjct: 928  DRTAEAAEAIRAGLRLNIDQEPQIAELV-QLARGRREKRDALEFIEAELRRQPHTGEGLI 986

Query: 153  REFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                V + ++  +    D         + LD  PD      AV QQ         A    
Sbjct: 987  AFVGVSHHVFQGNSDPEDHTRLLETLEQILDDRPDLWHAWSAVAQQLTGLGRLDEAHALA 1046

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
             +         +    L +  +      G+         +++ +     +A+   A++L 
Sbjct: 1047 REAVDRFPLLGK----LWLDLAQVCHALGNADGRLDALRQAVAVSPGWSLAARELAEALD 1102

Query: 272  SQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESL 328
              +++  A  +LE+    NP   +A+ +          +   L RA     +      + 
Sbjct: 1103 DADQRDDAIAVLERATVRNPTDALAHGFLAERLWDEGRSREALDRAKTAVRLEPGYDWAW 1162

Query: 329  VIVSKIALEMGSIDQ-AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
              V   A  M   D+ A     LA   A    ++L LA+       N + +L     A+
Sbjct: 1163 HAVQLWADRMELPDEPAELTRELARDRAGDPRVWLRLARTLHHPRFNDE-VLAALDRAI 1220


>gi|332707120|ref|ZP_08427178.1| glycosyltransferase [Lyngbya majuscula 3L]
 gi|332354145|gb|EGJ33627.1| glycosyltransferase [Lyngbya majuscula 3L]
          Length = 1933

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 46/127 (36%), Gaps = 4/127 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            ++     A     KA+++ PD PW  + +       ++W  AI       ++  E   +
Sbjct: 781 LKLERWQDAADVFRKAIELKPDFPWSYQNLGDALQALEQWDEAI----IAYRHGIEVKSD 836

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                       A  G  + +     ++++L  N   A     ++L    +  +A +  E
Sbjct: 837 WPWSYYNLGQALAKTGQWLDAIACYQKAIELDPNFAKAYSHLGEALARIGEWDEAIISYE 896

Query: 285 KIWKVNP 291
           +   ++P
Sbjct: 897 QAIDIDP 903



 Score = 44.2 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 20/229 (8%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D +       KA   +PD+  V   +   Y   ++W  AI    +       +    A  
Sbjct: 545 DQDQELESFIKAAQQNPDSAKVQANLGSAYAQRQQWLDAIACYQKAIAINPSF----AGA 600

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286
               +          A+     ++L L  N++ A        +L S  K  +      + 
Sbjct: 601 YRNLAKVLTQTNQPEAAADYWYQALTLEPNTVSAEEHLNLGNTLTSLGKLTQGIACYRQA 660

Query: 287 WKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            ++   P ++  Y  L             L    +  + N +  ++   +  +  E  + 
Sbjct: 661 IQLK--PNLSEAYHRLGALLKNQGEEQELLSLYQQAVQNNPQDAKAYFYLGNLFTEEEAW 718

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++A+   + A ++ P       LAQ          K   W + A+ A  
Sbjct: 719 EEAYPSYLKATQLQPN------LAQAHHNLGDTLVKQQRW-EEAVTAYR 760



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 74/238 (31%), Gaps = 32/238 (13%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR----- 175
           L  +L  Q    E     A    + +   P T          E   +G+  ++       
Sbjct: 604 LAKVLT-QTNQPE---AAADYWYQALTLEPNTVSA------EEHLNLGNTLTSLGKLTQG 653

Query: 176 YA--TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
            A   +A+ + P+       +        E    ++   Q  +N        A       
Sbjct: 654 IACYRQAIQLKPNLSEAYHRLGALLKNQGEEQELLSLYQQAVQNNP----QDAKAYFYLG 709

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
               ++     +Y   +++ +L  N   A      +L+ Q +  +A     +  ++   P
Sbjct: 710 NLFTEEEAWEEAYPSYLKATQLQPNLAQAHHNLGDTLVKQQRWEEAVTAYRRAIEIQ--P 767

Query: 294 EIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           E +  Y ++   + + KL+R         +  E+  +   S   +      +   D+A
Sbjct: 768 EFSWSYNNM--GDALLKLERWQDAADVFRKAIELKPDFPWSYQNLGDALQALEQWDEA 823



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCR-IGDLNSAQRYATK 179
           VYL + Q  L +RQ+  A    E  ++I P T +   Y ++  + + +G    A  Y  +
Sbjct: 173 VYLQQAQTYLKQRQWQQAIAACERAIKIAPDTAQV--YKIWGNALQFMGQTTEAMGYYGQ 230

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           AL+I PD   V   +   Y   ++W  AI +  +  +   +
Sbjct: 231 ALEIEPDFAEVYANLGSLYAGQQDWQHAIAYYQKAIELKPD 271


>gi|262197085|ref|YP_003268294.1| hypothetical protein Hoch_3902 [Haliangium ochraceum DSM 14365]
 gi|262080432|gb|ACY16401.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 1921

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 68/231 (29%), Gaps = 38/231 (16%)

Query: 168 GDLNSAQRYATKALDISPDAP---WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
           GD   A     +A DI P      W  + ++Q+     +W+  +  ++     A +  + 
Sbjct: 277 GDEEGALAAHRRAFDIDPTHRANLWALQRLLQRR---GDWASFVDVIDTAALAASDDPQR 333

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             + L    +  A   D  ++      +      SI A     +  ++      A   + 
Sbjct: 334 AQLYLEKAHVFEAHLRDAESARDAYERAAAFDPRSIAALRGLERLCLAAGDLAGAVHAIT 393

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +      P  A  Y                             + ++++A + G +D A
Sbjct: 394 ALAAAVDDPAQAMAYL----------------------------LDLARLAADSGDLDTA 425

Query: 345 HAKAMLAMKIA----PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                 A + A          L LA+ E         +  W ++   A  D
Sbjct: 426 RDALERAAESAFDAVAVARERLHLAEREGDAEAQIAALDAWLEADARAPED 476


>gi|198463697|ref|XP_001352910.2| GA19898 [Drosophila pseudoobscura pseudoobscura]
 gi|198151372|gb|EAL30411.2| GA19898 [Drosophila pseudoobscura pseudoobscura]
          Length = 931

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 686

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          + +   + LK C  SI   + +A     +
Sbjct: 687 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAANTYTQGLKKCPTSIPLWVLSANLEERK 746

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               KA  ILE+    N  P++A ++   +       LK
Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEINAQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|15225686|ref|NP_180804.1| calcium-binding EF hand family protein [Arabidopsis thaliana]
 gi|75160474|sp|Q8S8L9|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein
           At2g32450
 gi|20197430|gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
 gi|28393656|gb|AAO42246.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
 gi|28973559|gb|AAO64104.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
 gi|330253593|gb|AEC08687.1| Calcium-binding tetratricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 802

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  L   +    +W      + +   +    +G ++++     E+  LC     A     
Sbjct: 287 LLALEAAESGGNQWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLG 346

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +L    + R A   LE+   + P     H ++A+   H + E+    ++   R  ++  
Sbjct: 347 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHAMGEDERA-IEVFQRAIDLKP 404

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++L  +  + +++G   +A       + + P      L   +    +  T++     
Sbjct: 405 GHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRAL 464

Query: 383 QSALH 387
           + AL 
Sbjct: 465 KEALK 469



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              RA+ L+  +L     G+  A+     E++ L  +   A    A SL +  +  +A  
Sbjct: 337 THYRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIE 394

Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331
           + ++   + P H +    +  +Y  L      G+ +RA       L         + +  
Sbjct: 395 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNK 447

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   L  G  ++A      A+K+  R
Sbjct: 448 AVSLLGAGETEEAKRALKEALKMTNR 473


>gi|329903034|ref|ZP_08273346.1| putative signal peptide containing protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548512|gb|EGF33178.1| putative signal peptide containing protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 596

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 80/242 (33%), Gaps = 5/242 (2%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQ 174
              E +  LL  +IA     +  A   + M+     TR+  A       +        A 
Sbjct: 64  LTEELMFKLLSAEIAFQRGDWQPA--YINMISVAQQTRDPRAARRAAEMAIAAKQPEEAM 121

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
                   ++P +   T+  V   +L  + S        + ++ +  +R   IL + R L
Sbjct: 122 VAVRFWRALAPKSDEATQYYVGMILLGDDLSEFQEVFALRLRDVRPPSRPLLILQVQRLL 181

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
             A       +  + + +     +     I  A++  S N   +A        K+ P  E
Sbjct: 182 LRAKDKKEAFAVMENLVAPY--PDLAETHIALAQAAFSNNDPARARSEAMLALKIKPDSE 239

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           IA +    +  +     +        + +S E  +   ++ +E    DQA  +    +K 
Sbjct: 240 IAALTLAQVIPDKKESAQSLQSYLSAHPDSREIRIAYGRMLIEQNLYDQARKEFETLLKD 299

Query: 355 AP 356
            P
Sbjct: 300 QP 301



 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%)

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           L +++          L     +  E+ + +++ A       +A ++AMLA+KI P  EI 
Sbjct: 182 LRAKDKKEAFAVMENLVAPYPDLAETHIALAQAAFSNNDPARARSEAMLALKIKPDSEIA 241

Query: 362 LL 363
            L
Sbjct: 242 AL 243


>gi|195496397|ref|XP_002095677.1| GE19580 [Drosophila yakuba]
 gi|194181778|gb|EDW95389.1| GE19580 [Drosophila yakuba]
          Length = 931

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDEALR 686

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          +     + LK C  SI   I +A     +
Sbjct: 687 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTQGLKKCPTSIPLWILSANLEERK 746

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               KA  ILE+    N  P++A ++   +       LK
Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|219849276|ref|YP_002463709.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219543535|gb|ACL25273.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
          Length = 520

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 15/171 (8%)

Query: 200 LAKEWSRAITFLNQKKKNA--------KEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           L   ++ AI         A        + + R RAI+ +      A +     +  + +E
Sbjct: 41  LRAAYADAIEHFKAALIAAYVDGEEQAQIYERERAIIYLYIGNSLAFQDHWEEALREYLE 100

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
           +++       A      +  +  +  +A    ++  + NP     H  +   Y  +  ++
Sbjct: 101 AVQTDPQLAEAHYNLGVAFAALGQIDRAIAAFKETLEHNPNLYEAHFALGRCYQRI--DD 158

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                           ++ E    +  +    G+ + A      A+++ P 
Sbjct: 159 AGRAYIHFSSACNARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 83/298 (27%), Gaps = 46/298 (15%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ-------QHTFHNEYLVYLLE----------VQIALAE 133
           GLM  +     LA++  +   +            +E LV   E           Q    +
Sbjct: 184 GLMHQSHGAHELAQRCFAEALRVEPTFVSPEPLPDEPLVNRSEEEVAQWYYRLSQALKQQ 243

Query: 134 RQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                A      +LQ       A Y         R  D   A     +   I P      
Sbjct: 244 GYEEEAERIYRALLQWRPQEYAARYLLGNLLARQRRFDEAYA-----EYEQIPPQHRHYV 298

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIA 244
           +A ++          AI  L +K K A          N +   L +       D G    
Sbjct: 299 DARLR--------MSAILRLQKKPKQAYEILFACARLNPHHGQLFLQMGKLLYDMGMTRQ 350

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIANIY 299
           +      +++L      A         +  +   A     K  ++ P  H    ++  +Y
Sbjct: 351 AVRAFERAVQLLPTDAQAHYLLGFVYNTMGRDTWALAAWRKAVQLAPDAHSLRFDLGYMY 410

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                 +     K   ++ E   + +E+  ++     E+    +A       ++  PR
Sbjct: 411 IRRGRYDLAA--KEFQQVLEQWPDDIETQFMLGLCYKELLEPSRAIPLFEKVLRRNPR 466


>gi|121605693|ref|YP_983022.1| hypothetical protein Pnap_2799 [Polaromonas naphthalenivorans CJ2]
 gi|120594662|gb|ABM38101.1| Tetratricopeptide domain protein [Polaromonas naphthalenivorans
           CJ2]
          Length = 381

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 84/266 (31%), Gaps = 53/266 (19%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +Y  A    E ++         RE A ++L  +  + G L+ A+  A + L+ +P    
Sbjct: 85  GEYERAVRVHEHLMSRGDLTQHERERAQHALALDFLKAGLLDRAEA-ALRKLEGTPFEEE 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y  +++W+ A     +    +   ++  +A  L  ++  +A  GD   + + 
Sbjct: 144 ARLALLSIYERSRDWANATEIAARLGSSSQGSFSTRQAHYLCEQASASAATGDAAKALNT 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----------------------------- 279
            ++++ +        I  AK          A                             
Sbjct: 204 LMQAVAMAPALARPLIDLAKLQYQLGNAHDALHTLLKLTTAAPQALPLAAGLLANIAQNS 263

Query: 280 ------EVILEKIWKVNPHPEIANIYTHLLSENTVGK------LKRALRLEEINKESV-- 325
                   +L+  +   P  ++      L  +    +      L+R + L   +K     
Sbjct: 264 DEQQTTLALLKASYAQAPSIDLIEAIVKLEKDPATARQWYVQHLEREVSLVAASKWIAGE 323

Query: 326 ----ESLVIVSKIALEMGSIDQAHAK 347
               E    + + A++  +      +
Sbjct: 324 KLEDERHHALVQRAMDQATKPLMRYR 349


>gi|321465641|gb|EFX76641.1| hypothetical protein DAPPUDRAFT_54951 [Daphnia pulex]
          Length = 825

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/381 (12%), Positives = 107/381 (28%), Gaps = 68/381 (17%)

Query: 13  LVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFF-----LS 67
           LV   F ++             +  +      L +L+ + F  +L+   +R         
Sbjct: 411 LVALGFHLIDDL--------LRQKQQMQASNSLRLLFRWAFVLLLVVYSARTIQRNRDWH 462

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
               L+      N  K Y  L    +  +      A + +           +    L   
Sbjct: 463 TEETLYRSGISVNPPKAYGNLAN--ILSSTGRKDEAEQAYKKALSYRNNMADVHYNL--G 518

Query: 128 QIALAERQYNIAHEKLE---------MMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            +   +++Y  A +             M  +      A+  +  E+  +       +   
Sbjct: 519 ILYQEQKRYEEAIQSYRSAVHYRPRMAMAHLNMGLVLALMGMKDEAIEV--YRRCSQLDG 576

Query: 179 KALDISPDAPWVTEAVV----QQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARS 233
             L           + +    + +    ++++AI   N+  +     +       ++  +
Sbjct: 577 SGLKDPRTHETTKISALFNLGRLHADDGQYTKAIDVYNEAIQRMPTHYQPQSLYNMLGEA 636

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291
               D+     + H   E+L+   + I A +   K L   N+  +AE +  +   ++P  
Sbjct: 637 YFKLDRLK--EAEHWYREALRAKADHIPAHLTYGKLLTKMNRLSEAEDMFLRAKSLSPND 694

Query: 292 ----------------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
                           H E A  Y                    +     E++   +   
Sbjct: 695 STVYQHYGQYLSECERHTEAAEQYVRA---------------ASLAPTEYETVFNAANTL 739

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
            + G   +A      A+KI P
Sbjct: 740 RQAGRHSEAEQYYRSAVKIRP 760


>gi|307300108|ref|ZP_07579893.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
 gi|306904997|gb|EFN35580.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
          Length = 637

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 15/192 (7%)

Query: 206 RAITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDN 258
            A   L++  +    +   RA L        +      A   D      +A ++++L  N
Sbjct: 395 AARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATTTDAETGLSEARQAVRLDPN 454

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLK 312
                   +  L +      A    ++  ++NP+ P+    +A       S +  V   +
Sbjct: 455 LAAGYQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAE 514

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           RA RL  +  E      +  +     G +D+A       +  AP++   LL+     +  
Sbjct: 515 RARRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPQEADCLLIRTAVLSQR 572

Query: 373 HNTDKILYWTQS 384
            + +        
Sbjct: 573 GDVEGAQRTMAR 584



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 17/155 (10%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266
            L  + +         A++     L  A + D   +   A   +    + +         
Sbjct: 376 VLQARDRYKHGSKDAEALIAARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATT 435

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321
             +    ++ R+A  +          P +A  Y  L      + +  G ++ A R  E+N
Sbjct: 436 TDAETGLSEARQAVRL---------DPNLAAGYQVLSFGLSATGDYPGAMQAAQRAVELN 486

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +SL+ ++K  +  GS D+A   A  A ++ P
Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  +    A +A+ + P+     + +        ++  A+    Q  + A E N N    
Sbjct: 437 DAETGLSEARQAVRLDPNLAAGYQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEK 285
           L+A +      G    +  +A  + +L         +    ++L +  +  +A+ +L +
Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLRE 550



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD   A + A +A++++P+ P    A+ +  V    +  A+    + ++         
Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527

Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             +      +    D+ D +       E L          +     L  +     A+  +
Sbjct: 528 TYVYGQALYAAGRLDEADEVL-----RECLIRAPQEADCLLIRTAVLSQRGDVEGAQRTM 582

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++ +V+P   +A+  +     ++    +   RL E N   V S  +
Sbjct: 583 ARLTEVDPEFSLASERSMRRFGDSALMEQFLSRLAEANAPDVTSGFL 629


>gi|170768083|ref|ZP_02902536.1| tetratricopeptide repeat protein [Escherichia albertii TW07627]
 gi|170122849|gb|EDS91780.1| tetratricopeptide repeat protein [Escherichia albertii TW07627]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       R+G                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQSTSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + K  K+  R   A      +L++    D   +     +      NS   SI   +  ++
Sbjct: 167 QVKLGKDKQRVEIAHFYCELALQHMASDDFDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|308272099|emb|CBX28707.1| hypothetical protein N47_G40310 [uncultured Desulfobacterium sp.]
          Length = 255

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 9/153 (5%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L + +     L  A  +  KA+++ PD       +   Y+  K+W+ AI+   +  KN 
Sbjct: 72  GLVYMAKDR--LQLAVDHFKKAIELKPDYAPAINNLGTAYLALKDWNSAISCFEKVYKNL 129

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                +  +  +  +    +K D   +     ++LK+  N  +A      + +      +
Sbjct: 130 LYATPHYPLTNLGWA--YYNKNDFALAEKYYKQALKIEPNYSIALHGLGLTYLKMGNAPE 187

Query: 279 AEVILEKIWKVNPH-P----EIANIYTHLLSEN 306
           A + LEK  K +P  P    ++A  Y  L   +
Sbjct: 188 AVIYLEKAMKYSPWVPERYFDLAKAYEKLEQYD 220



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 13/199 (6%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                   V + Y+   +++ A+   L  +K    + + +  + L+  + +         
Sbjct: 29  RQGEARRDVGEAYMNQNDYTAALNELLEAEKLYPNDHHLHNDLGLVYMAKDRLQ-----L 83

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK----VNPH-PEIANIY 299
           +     ++++L  +   A      + ++      A    EK++K      PH P     +
Sbjct: 84  AVDHFKKAIELKPDYAPAINNLGTAYLALKDWNSAISCFEKVYKNLLYATPHYPLTNLGW 143

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--R 357
            +    +     K   +  +I      +L  +    L+MG+  +A      AMK +P   
Sbjct: 144 AYYNKNDFALAEKYYKQALKIEPNYSIALHGLGLTYLKMGNAPEAVIYLEKAMKYSPWVP 203

Query: 358 KEIFLLLAQIEQANSHNTD 376
           +  F L    E+   ++  
Sbjct: 204 ERYFDLAKAYEKLEQYDKA 222



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            +  L  L        +  + +A +  +  L+I      A++ L     ++G+   A  Y
Sbjct: 134 PHYPLTNL--GWAYYNKNDFALAEKYYKQALKIEPNYSIALHGLGLTYLKMGNAPEAVIY 191

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             KA+  SP  P     + + Y   +++ +AI 
Sbjct: 192 LEKAMKYSPWVPERYFDLAKAYEKLEQYDKAIE 224


>gi|269960670|ref|ZP_06175042.1| hypothetical protein VME_14260 [Vibrio harveyi 1DA3]
 gi|269834747|gb|EEZ88834.1| hypothetical protein VME_14260 [Vibrio harveyi 1DA3]
          Length = 1253

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 7/185 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL +      + Q+  A       +Q   T+ +A  SL        +  +A +   +AL
Sbjct: 389 AYLDQGDALAEKGQFKQAESLYRKAIQSDKTQPYAFTSLGALYLAQKNYAAADKAYIQAL 448

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNAKEWNRNRAILLIARSLEN 236
            +           +   +  ++W+ A +   +     K+  +++ N  ++ +++AR    
Sbjct: 449 QLEALNGSALRGRLDVRIEQQDWAGAASLAQRFSPAQKQVVSEKINGIQSEIILARLRIA 508

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI 295
             K D         E ++L   S    +  A  + S   KR+A+ ++   W  N   PE+
Sbjct: 509 IAKDDQAGMQSAVEELIELKPTSPWLRLDIADVVRSMGDKRRADKLM-SEWATNSTDPEM 567

Query: 296 ANIYT 300
              Y 
Sbjct: 568 KFAYA 572


>gi|208779645|ref|ZP_03246990.1| hypothetical protein FTG_0897 [Francisella novicida FTG]
 gi|208744606|gb|EDZ90905.1| hypothetical protein FTG_0897 [Francisella novicida FTG]
          Length = 385

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+++ +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|254373300|ref|ZP_04988788.1| conserved hypothetical protein [Francisella tularensis subsp.
          novicida GA99-3549]
 gi|151571026|gb|EDN36680.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 385

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+++ +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|134301553|ref|YP_001121521.1| hypothetical protein FTW_0482 [Francisella tularensis subsp.
          tularensis WY96-3418]
 gi|134049330|gb|ABO46401.1| hypothetical membrane protein [Francisella tularensis subsp.
          tularensis WY96-3418]
          Length = 385

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+++ +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|121635525|ref|YP_975770.1| hypothetical protein NMC1831 [Neisseria meningitidis FAM18]
 gi|120867231|emb|CAM11000.1| putative periplasmic hypothetical protein [Neisseria meningitidis
           FAM18]
 gi|325202841|gb|ADY98295.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 109/356 (30%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +   +      A+E+ K C            
Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 279 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            +  A   + D +       L      ++   + +  S    W    P       F
Sbjct: 331 DMNPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|118497947|ref|YP_898997.1| hypothetical protein FTN_1371 [Francisella tularensis subsp.
          novicida U112]
 gi|194323169|ref|ZP_03056953.1| hypothetical protein FTE_0759 [Francisella tularensis subsp.
          novicida FTE]
 gi|118423853|gb|ABK90243.1| conserved protein of unknown function [Francisella novicida U112]
 gi|194322533|gb|EDX20013.1| hypothetical protein FTE_0759 [Francisella tularensis subsp.
          novicida FTE]
 gi|332678663|gb|AEE87792.1| hypothetical protein FNFX1_1406 [Francisella cf. novicida Fx1]
          Length = 385

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+++ +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|56708454|ref|YP_170350.1| hypothetical protein FTT_1406c [Francisella tularensis subsp.
          tularensis SCHU S4]
 gi|110670925|ref|YP_667482.1| hypothetical protein FTF1406c [Francisella tularensis subsp.
          tularensis FSC198]
 gi|224457605|ref|ZP_03666078.1| hypothetical protein FtultM_08179 [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|254371078|ref|ZP_04987080.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis FSC033]
 gi|254875298|ref|ZP_05248008.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|56604946|emb|CAG46039.1| hypothetical membrane protein [Francisella tularensis subsp.
          tularensis SCHU S4]
 gi|110321258|emb|CAL09422.1| hypothetical membrane protein [Francisella tularensis subsp.
          tularensis FSC198]
 gi|151569318|gb|EDN34972.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis FSC033]
 gi|254841297|gb|EET19733.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|282159647|gb|ADA79038.1| hypothetical membrane protein [Francisella tularensis subsp.
          tularensis NE061598]
          Length = 385

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+++ +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|16264038|ref|NP_436830.1| putative adenylate cyclase protein [Sinorhizobium meliloti 1021]
 gi|15140162|emb|CAC48690.1| putative adenylate cyclase protein [Sinorhizobium meliloti 1021]
          Length = 637

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 15/192 (7%)

Query: 206 RAITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDN 258
            A   L++  +    +   RA L        +      A   D+     +A ++++L  N
Sbjct: 395 AARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATTTDVETGLSEARQAVRLDPN 454

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLK 312
                   +  L +      A    ++  ++NP+ P+    +A       S +  V   +
Sbjct: 455 LAAGFQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAE 514

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           RA RL  +  E      +  +     G +D+A       +  AP++   LL+     +  
Sbjct: 515 RARRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPQEADCLLIRTAVLSQR 572

Query: 373 HNTDKILYWTQS 384
            + +        
Sbjct: 573 GDVEGAQRTMAR 584



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 17/155 (10%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266
            L  + +         A++     L  A + D   +   A   +    + +         
Sbjct: 376 VLKARDRYKHGSKDAEALIAARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATT 435

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321
                  ++ R+A  +          P +A  +  L      + +  G ++ A R  E+N
Sbjct: 436 TDVETGLSEARQAVRL---------DPNLAAGFQVLSFGLSATGDYPGAMQAAQRAVELN 486

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +SL+ ++K  +  GS D+A   A  A ++ P
Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521



 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+ +    A +A+ + P+     + +        ++  A+    Q  + A E N N    
Sbjct: 437 DVETGLSEARQAVRLDPNLAAGFQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEK 285
           L+A +      G    +  +A  + +L         +    ++L +  +  +A+ +L +
Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLRE 550



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD   A + A +A++++P+ P    A+ +  V    +  A+    + ++         
Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527

Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             +      +    D+ D +       E L          +     L  +     A+  +
Sbjct: 528 TYVYGQALYAAGRLDEADEVL-----RECLIRAPQEADCLLIRTAVLSQRGDVEGAQRTM 582

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++ +V+P   +A+  +     ++    +   RL E N   V S  +
Sbjct: 583 ARLTEVDPEFSLASERSMRRFGDSALMEQFLSRLAEANAPDVTSGFL 629


>gi|46137453|ref|XP_390418.1| hypothetical protein FG10242.1 [Gibberella zeae PH-1]
          Length = 931

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 80/235 (34%), Gaps = 26/235 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  R G+L+ A+    +A + +P+   +  + V+    +    +A   L   ++ A 
Sbjct: 605 LAKEKWRAGELDGARLVLKRAFNQNPNNEDIWLSAVKLESESGNEEQARKLLEIAREQAP 664

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                   ++  R L     G++ A+    +++L+L   S    +   +      K   A
Sbjct: 665 TDRVWMKSIVYERVL-----GNIEAALDLVLQALQLFPASPKLWMLKGQIYEDLGKIGPA 719

Query: 280 EVILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIA 335
                   K  P    +  +Y+ L  E+ +  +K    L+        + ++     ++ 
Sbjct: 720 REAYATGVKAVPKSVALWLLYSKLEEESGLT-VKARSVLDRARLAVPNNALLWRESVRLE 778

Query: 336 LEMGSIDQAHAKAMLAMKIAP----------------RKEIFLLLAQIEQANSHN 374
              G++ QA A    A +  P                 +    +L  I+  +   
Sbjct: 779 RRAGNMAQAKAMMARAHREVPKSDVLWAEQVWHLEARTQRKARILEAIKTVDGSP 833



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 11/190 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            NI  A  +   +     F     +++L+ QI     +   A E     ++    +  A+
Sbjct: 680 GNIEAA--LDLVLQALQLFPASPKLWMLKGQIYEDLGKIGPAREAYATGVKAVP-KSVAL 736

Query: 158 YSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + LY       G    A+    +A    P+   +    V+    A   ++A   + +  +
Sbjct: 737 WLLYSKLEEESGLTVKARSVLDRARLAVPNNALLWRESVRLERRAGNMAQAKAMMARAHR 796

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              + +     +L A  + + +      +    +E++K  D S +  + AA+      K 
Sbjct: 797 EVPKSD-----VLWAEQVWHLEARTQRKAR--ILEAIKTVDGSPIIFVVAARIFWGDRKL 849

Query: 277 RKAEVILEKI 286
            +A+   EK 
Sbjct: 850 EQAQKWFEKA 859


>gi|302189081|ref|ZP_07265754.1| peptidase aspartic, active site [Pseudomonas syringae pv. syringae
           642]
          Length = 654

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 24/228 (10%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL+ R       GD   +  D  ++  +   ++      A    +  +  +A   L
Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333
           ++        P  E+   Y    + +    +   KR  R   +      ++  S +  S 
Sbjct: 303 QQARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSN 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
            A  +    +            P +++F             +D    W
Sbjct: 363 DAQAIAYFKRVLDYQQTGDLQMPAQQVF-------DTRRAVSDLSREW 403



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 25/216 (11%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L    +L                 TG  ++A  +   A  +        +F  +     L
Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTA--VSEAREAVRSFPKQMAYRKL 219

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            V   +A+ QY  A         +    AT          +  R+GD + A++   +A+ 
Sbjct: 220 LVSALIAQGQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234
           +  + P   +A +  Y    + S A+  L Q +   +         A  L        +L
Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGAL 333

Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264
           +   + D             A  +++  +++   + 
Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369


>gi|270160089|ref|ZP_06188745.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|289165132|ref|YP_003455270.1| TPR repeat protein [Legionella longbeachae NSW150]
 gi|269988428|gb|EEZ94683.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|288858305|emb|CBJ12173.1| TPR repeat protein [Legionella longbeachae NSW150]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/159 (11%), Positives = 61/159 (38%), Gaps = 6/159 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ++  P         ++ +L  +    G  + A+R   + +++      
Sbjct: 83  GEVDRAIRIHQNLIARPQLSLVQKKESLMALGQDYMSAGLFDRAERIFLEVVELGGSKET 142

Query: 190 VT-EAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +   ++  Y   K W +A+  + + +      ++   A      + +      +  + +
Sbjct: 143 SSLHGLLAIYQQEKAWEKALDVIKKLEITTGTSFHHQAAHYYCEMAGQALKTNSLDKAAY 202

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              +++ +   S+ AS+  A   + + + ++A   L+K+
Sbjct: 203 CIKQAINVDAASVRASLMHASLEMKEGRYKQAIRSLKKV 241


>gi|162452186|ref|YP_001614553.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161162768|emb|CAN94073.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1765

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 65/208 (31%), Gaps = 7/208 (3%)

Query: 81   YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             D+    L  G   +AA +   A    +  +         L  L   ++  A+  +    
Sbjct: 1152 RDRAEALLGLGEARLAAGDPDGAVAALNGAADLLPESPTPLALL--SRVFEAKGDWEEVV 1209

Query: 141  EKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
                  L        +           +       +A+ Y   ALD  PD   +   ++Q
Sbjct: 1210 RLKHRRLDVVTGEERSALLLEIGDLLAAHLHDRARAAKSYVA-ALDERPDDRKILTKLMQ 1268

Query: 197  QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             Y   K+WS+ +  + +      +  +    L  A  +     GD+  +     E L L 
Sbjct: 1269 LYSEEKDWSKLVDIVLKLAAKIDDSRQKAKYLHTAAIVSARQLGDLDRAATFYDEVLALD 1328

Query: 257  DNSIMASICAAKSLISQNKKRKAEVILE 284
             +   A   A +    +    + E +L+
Sbjct: 1329 PSLTRALAEAIELRGEKGDHEEVERLLK 1356



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               GD + A      ALD  P     + A+   Y+   + + A+  +  ++    E N  
Sbjct: 947  EEKGDRDGAIERYKMALDAQPQNAGASSALRAAYLARGDATSAVELI-AREAEVAEGNLA 1005

Query: 225  RAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-- 281
            +  L    +L   ++  D   +   A  ++ L     +  + +        +  +A    
Sbjct: 1006 KGRLYGEMALLLRERLKDDGRAAEAATRAVDLDPTGALGLMISGDLAFEAGRFLEAARHY 1065

Query: 282  -ILEKIWKVNPHPE---IANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             +L     V P  +   +   Y   L    ++   +     L  +  +   +L   +++ 
Sbjct: 1066 ELLASRVDVLPKEQGLKLLLRYVDALGKSGSSGKAIGTVKALLALAPDDPAALSRAARVN 1125

Query: 336  LEMGSIDQAHA 346
            L+ G   +A  
Sbjct: 1126 LDAGKAKEAAE 1136



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 92/310 (29%), Gaps = 37/310 (11%)

Query: 81   YDKGYKALYTGLMSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             ++G K L   + ++  + +   A      +          L      ++ L   +   A
Sbjct: 1077 KEQGLKLLLRYVDALGKSGSSGKAIGTVKALLALAPDDPAALSR--AARVNLDAGKAKEA 1134

Query: 140  HEKLEMMLQI------PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             E    ++           R  A+  L       GD + A      A D+ P++P     
Sbjct: 1135 AELYGRLVDRFGAGLPERDRAEALLGLGEARLAAGDPDGAVAALNGAADLLPESPTPLAL 1194

Query: 194  VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            + + +    +W   +   +++  +        A+LL    L  A   D   +    + +L
Sbjct: 1195 LSRVFEAKGDWEEVVRLKHRRL-DVVTGEERSALLLEIGDLLAAHLHDRARAAKSYVAAL 1253

Query: 254  KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                +         +    +    K   I+ K                   +++  K K 
Sbjct: 1254 DERPDDRKILTKLMQLYSEEKDWSKLVDIVLK--------------LAAKIDDSRQKAKY 1299

Query: 314  ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
                         + ++ ++   ++G +D+A       + + P     L  A   +    
Sbjct: 1300 LHT----------AAIVSAR---QLGDLDRAATFYDEVLALDPSLTRALAEAIELRGEKG 1346

Query: 374  NTDKILYWTQ 383
            + +++    +
Sbjct: 1347 DHEEVERLLK 1356



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 48/302 (15%)

Query: 134  RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR-YAT-------------- 178
                 A  + E  L++      A+  L     R G   +  +  A               
Sbjct: 735  GDLGEATRRYEAALELDPASLTALRGLDRIHSRAGSYAALLQNLARQIDVSATPRQKINL 794

Query: 179  ---------KALDISPDAPWVTEAVVQQYVLA--------------KEWSRAITFLNQKK 215
                     +       A    EA++                    + W   ++   ++ 
Sbjct: 795  YERIAGIHDEEFLDHAKAAEALEAILGIDSAHEGSLAALGRHYRALERWEDVVSLYERQL 854

Query: 216  KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                +  R   +LL    +     G    +       L +  +   A    A    +   
Sbjct: 855  GIVPDDKRREELLLAMGRVLLDQIGSPERARKAYERVLAIDPHHAGALESLAHVRAATGD 914

Query: 276  KRKAEVILE----KIWKVNPHPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLV 329
               A   +E             ++      LL E  +  G ++R     +   ++  +  
Sbjct: 915  AAAALSAIESLAATAKTAESKADLWIRAARLLEEKGDRDGAIERYKMALDAQPQNAGASS 974

Query: 330  IVSKIALEMGSIDQA----HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
             +    L  G    A      +A +A     +  ++  +A + +    +  +       A
Sbjct: 975  ALRAAYLARGDATSAVELIAREAEVAEGNLAKGRLYGEMALLLRERLKDDGRAAEAATRA 1034

Query: 386  LH 387
            + 
Sbjct: 1035 VD 1036



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 11/189 (5%)

Query: 92   LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIP 150
            L++   H+   A K +     +     + L  L+  Q+   E+ ++   + +  +  +I 
Sbjct: 1234 LLAAHLHDRARAAKSYVAALDERPDDRKILTKLM--QLYSEEKDWSKLVDIVLKLAAKID 1291

Query: 151  ATREFAVYSLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             +R+ A Y L+  +     ++GDL+ A  +  + L + P         ++      +   
Sbjct: 1292 DSRQKAKY-LHTAAIVSARQLGDLDRAATFYDEVLALDPSLTRALAEAIELRGEKGDHEE 1350

Query: 207  AITFLNQKKKNAKEWNRNRAILLIARSLENADKGD---MIASYHDAIESLKLCDNSIMAS 263
                L  +   A E N    +L     L    K     M  +      +  L  +S   +
Sbjct: 1351 VERLLKVELDRATEENDTAKMLETFDRLGAVYKDKLGWMSEAIDAYEAAQTLDPDSEARN 1410

Query: 264  ICAAKSLIS 272
               A    S
Sbjct: 1411 ELLANLYAS 1419


>gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
 gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
          Length = 608

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 80/286 (27%), Gaps = 48/286 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTE 192
            +Y  A E     LQ   T    VY L     R+ GD   A   + ++L + P       
Sbjct: 298 GEYYQALEDYSQALQKNPT-LALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYC 356

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                  +  ++  A+       +     N N A     R++      D  A+  D  ++
Sbjct: 357 DRATTRRIQGDYQGAVQDYTMALQI----NCNLAEAYYGRAIAYEFLQDFAAAVADNTQA 412

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------------- 299
           +++  +   A      +      +++A     +   +N  P++   Y             
Sbjct: 413 IQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAIN--PDLVEAYYNRACLRYTLKDY 470

Query: 300 ----------THLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSI----- 341
                          ++      +      L++ +    +    ++  +           
Sbjct: 471 QSAVADYTEALQRNPQSATFYSDRANARYALQDYHGAIADYHQALAIDSSRAEDWYNRGR 530

Query: 342 --------DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKI 378
                     A A    A++  P     ++L A I +        I
Sbjct: 531 SLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLEDYQGAI 576



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 79/278 (28%), Gaps = 62/278 (22%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---------RIGDLNSAQRYATKALD 182
            +  Y  A            T+   +Y  Y E+           + D + A     +AL+
Sbjct: 15  LQGDYQEAIANY--------TQAIQLYPDYAEAYYNLGIILSAELQDYHGAIANFDQALE 66

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI------- 230
           I+P                 ++  AI   +Q  +    +      R  A L +       
Sbjct: 67  INPQFAEAYCNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRGNAYLALEKYDQAI 126

Query: 231 ---------------------ARSLENA-----DKGDMIASYHDAIESLKLCDNSIMASI 264
                                A++L N      + GD   +  D  ++L+       A  
Sbjct: 127 ANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIADFQQALQWHPYFAPAYS 186

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEE 319
                     + ++A    ++  +++  P +A +Y           +  G +K      +
Sbjct: 187 SRGNIYQILGEYQQAIAEHDRALQLD--PNLAEVYHNRGNARYALGDNQGAIKDYNYALK 244

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           I     E+      +   +    QA A    A+ + P 
Sbjct: 245 IKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPD 282



 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 77/275 (28%), Gaps = 17/275 (6%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH-EKLEMMLQ 148
            G+      +   A        Q H +            I     +Y  A  E    +  
Sbjct: 154 RGVARCNYGDYQGAIADFQQALQWHPYFAPAYSS--RGNIYQILGEYQQAIAEHDRALQL 211

Query: 149 IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            P   E          +   GD   A +    AL I P            Y   K++ +A
Sbjct: 212 DPNLAEVYHNRGNARYAL--GDNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQA 269

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I   NQ      +           R L     G+   +  D  ++L+      +     A
Sbjct: 270 IADFNQALILNPD----DVQAYSERGLIRETLGEYYQALEDYSQALQKNPTLALVYGLRA 325

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINK 322
                    + A     +  K++PH  +A  Y     T  +  +  G ++      +IN 
Sbjct: 326 NVRRLLGDYQGAIDDSNQSLKLHPH--LAQGYCDRATTRRIQGDYQGAVQDYTMALQINC 383

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              E+    +     +     A A    A+++ P 
Sbjct: 384 NLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPD 418


>gi|262305037|gb|ACY45111.1| acetylglucosaminyl-transferase [Skogsbergia lerneri]
          Length = 289

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A +   + +   P     A
Sbjct: 34  GQVGEAEECYNTALKLCPSHADSLNNL--ANIKREQGFIEDATKLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +        +   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 44.2 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   K       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVGEAEECYNTALKLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFIEDATKLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 53/177 (29%), Gaps = 14/177 (7%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E  ++G+          AL + P        +            A     +  +   E
Sbjct: 30  LKEKGQVGEAEECYN---TALKLCPSHADSLNNLANIKREQGFIEDATKLYLKALEVFPE 86

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +    A      +     +G +  +     E++++      A      +L      + A 
Sbjct: 87  F----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDIQGAL 142

Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               +  ++NP     H  +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 143 QCYSRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197


>gi|307316539|ref|ZP_07595982.1| adenylate/guanylate cyclase [Sinorhizobium meliloti AK83]
 gi|306897737|gb|EFN28480.1| adenylate/guanylate cyclase [Sinorhizobium meliloti AK83]
          Length = 637

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 15/192 (7%)

Query: 206 RAITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDN 258
            A   L++  +    +   RA L        +      A   D+     +A ++++L  N
Sbjct: 395 AARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATTTDVETGLSEARQAVRLDPN 454

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLK 312
                   +  L +      A    ++  ++NP+ P+    +A       S +  V   +
Sbjct: 455 LAAGFQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAE 514

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           RA RL  +  E      +  +     G +D+A       +  AP++   LL+     +  
Sbjct: 515 RARRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPQEADCLLIRTAVLSQR 572

Query: 373 HNTDKILYWTQS 384
            + +        
Sbjct: 573 GDVEGAQRTMAR 584



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 17/155 (10%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266
            L  + +         A++     L  A + D   +   A   +    + +         
Sbjct: 376 VLKARDRYKHGSKDAEALIAARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATT 435

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321
                  ++ R+A  +          P +A  +  L      + +  G ++ A R  E+N
Sbjct: 436 TDVETGLSEARQAVRL---------DPNLAAGFQVLSFGLSATGDYPGAMQAAQRAVELN 486

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +SL+ ++K  +  GS D+A   A  A ++ P
Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521



 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+ +    A +A+ + P+     + +        ++  A+    Q  + A E N N    
Sbjct: 437 DVETGLSEARQAVRLDPNLAAGFQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEK 285
           L+A +      G    +  +A  + +L         +    ++L +  +  +A+ +L +
Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLRE 550



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD   A + A +A++++P+ P    A+ +  V    +  A+    + ++         
Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527

Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             +      +    D+ D +       E L          +     L  +     A+  +
Sbjct: 528 TYVYGQALYAAGRLDEADEVL-----RECLIRAPQEADCLLIRTAVLSQRGDVEGAQRTM 582

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            ++ +V+P   +A+  +     ++    +   RL E N   V S  +
Sbjct: 583 ARLTEVDPEFSLASERSMRRFGDSALMEQFLSRLAEANAPDVTSGFL 629


>gi|218296681|ref|ZP_03497399.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23]
 gi|218242994|gb|EED09527.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23]
          Length = 357

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 9/204 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +   +G   +A     +A+  +P  P     + +  +     + A+            +
Sbjct: 39  VQLYALGRYEAALSLFERAVKENPGNPDALYWLARAQLKMGLLNPALENAKGLVARNPRY 98

Query: 222 -----NRNRAILLIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                  + A + + R+ E+ +KG      +     ++ ++                   
Sbjct: 99  IGGYMVLSEAYVALYRASEDKEKGKAYLEQALSVLRDAERINPRYAPIFAQRGLVYALLG 158

Query: 275 KKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +  KAE   +K   +   PE+  A    +L S      L +  +   +  ++ +  V  +
Sbjct: 159 QMDKAEEAFKKALALEDTPEVRSALAEVYLASGKLDEALDQYAKAVALAPKNQDLRVRYA 218

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
              L  G  + A        K+ P
Sbjct: 219 SALLLKGRPEAAAQVLEEGHKLKP 242



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 73/281 (25%), Gaps = 44/281 (15%)

Query: 84  GYKALYTGLMSI-------AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
           GY  L    +++             L + +      +        ++     +     Q 
Sbjct: 101 GYMVLSEAYVALYRASEDKEKGKAYLEQALSVLRDAERINPRYAPIFAQRGLVYALLGQM 160

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A E  +  L +  T E    +L       G L+ A     KA+ ++P    +      
Sbjct: 161 DKAEEAFKKALALEDTPEV-RSALAEVYLASGKLDEALDQYAKAVALAPKNQDLRVRYAS 219

Query: 197 QYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             +L      A   L +  K    +      +     SL     G    +      ++ L
Sbjct: 220 ALLLKGRPEAAAQVLEEGHKLKPLDAEGWYTLGQAYLSL-----GRPKEAGVALENAVAL 274

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                 A+                               +  +Y  L   +      R  
Sbjct: 275 APLRFPAAYYY----------------------------LGQVYLAL--GDAAKAKSRLT 304

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +  +  E   ++      +G  + A  +   A+K+ P
Sbjct: 305 VAARLEPKKPEYRYLLCLANERLGDKEGARYQCQEALKLKP 345


>gi|321453432|gb|EFX64668.1| hypothetical protein DAPPUDRAFT_204585 [Daphnia pulex]
          Length = 1195

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 21/264 (7%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKA 180
             L +  I+  ++ Y  A    +  L+  AT    V   +     ++G+ + A+    +A
Sbjct: 163 SLLGKACISFNKKDYKAALAYYKKALRTNATCPAGVRLGMGHCFLKLGNADKARLAFERA 222

Query: 181 LDISPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           LD+ P      V  A+++  +   +   +I    Q    A   + +  ++L   +     
Sbjct: 223 LDLDPKCVGALVGMAILELNLQESD---SIRNGVQLLSRAYAVDSSNPMVLNHLANHFFF 279

Query: 239 KGDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVN----- 290
           K D     H A+ +    +N  M +      A++   Q    +A     +  +       
Sbjct: 280 KKDYSKVQHLALHAFHNTENEAMRAESCYQMARAFHVQGDYDQAFQYYYQATQFASTNFI 339

Query: 291 -PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK---IALEMGSIDQAHA 346
            PH  +  +Y  +   +T    +   R+ +    + E++ I+      +      D A  
Sbjct: 340 LPHFGLGQMY--IYRGDTENAAQCFERVLKAQPGNYETMKILGSLYAASSSQSKRDIAKT 397

Query: 347 KAMLAMKIAP-RKEIFLLLAQIEQ 369
                 +  P   E ++ LAQI +
Sbjct: 398 HLKKVTEQFPDDVEAWIELAQILE 421



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 56/165 (33%), Gaps = 5/165 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             +    +  Y+ A +      Q  +T      + L       GD  +A +   + L   
Sbjct: 310 MARAFHVQGDYDQAFQYYYQATQFASTNFILPHFGLGQMYIYRGDTENAAQCFERVLKAQ 369

Query: 185 PDAPWVTEAVVQQYVLAKEWSRA-ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           P      + +   Y  +   S+  I   + KK   +  +   A + +A+ LE +D    +
Sbjct: 370 PGNYETMKILGSLYAASSSQSKRDIAKTHLKKVTEQFPDDVEAWIELAQILEQSDLQGSL 429

Query: 244 ASYHDAIESL--KLCDNSIMASI-CAAKSLISQNKKRKAEVILEK 285
           ++Y  A++ L  K+  +     +              ++    E+
Sbjct: 430 SAYSTAMKILKEKVQADIPPEILNNVGALYYRLGNLEESRKYFEQ 474


>gi|262305015|gb|ACY45100.1| acetylglucosaminyl-transferase [Neogonodactylus oerstedii]
          Length = 289

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVADAEECYNTALQLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++     +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQAQTEEATKLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   Q    H + L  L    I   + Q   A +   + +   P     A
Sbjct: 34  GQVADAEECYNTALQLCPTHADSLNNL--ANIKREQAQTEEATKLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 59/216 (27%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A E     LQ+  T   ++ +L            A +   KAL++ P+
Sbjct: 27  ANALKEKGQVADAEECYNTALQLCPTHADSLNNLANIKREQAQTEEATKLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYDARMKKLVAIVGDQLEKNRLPSVHPHH 236


>gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase
           [Acaryochloris marina MBIC11017]
 gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris
           marina MBIC11017]
          Length = 699

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 90/268 (33%), Gaps = 17/268 (6%)

Query: 38  RTSPFVILSILYFFLFAWILLFAVSRFFLS--CPAMLFHMLHKRNYDKGYKALYTGLMSI 95
           R S  V+ S L+       + + V++   S   P  +          +G+  L  G    
Sbjct: 366 RMSRKVVGSALFTLTLLGGIGYVVAQGLQSAVSPKAITVA-EVNRQVQGH--LQQGDQKF 422

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           A  +   A + ++   Q+   + E   +               A       +++  T   
Sbjct: 423 AQGDYQRALREYAAAIQKDPENAEA--HFNSGITKRRLNDLKGAIAHYTTAIRLKPTSVD 480

Query: 156 AV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           A     L      +GD  +A    T+A+ ++P            Y    +   AI   +Q
Sbjct: 481 AYNNRGLVR--SELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQ 538

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +   ++          R +  +D G+  A+  D  + ++L  N   A      + ++ 
Sbjct: 539 AVQIDAQYYE----AYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNL 594

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +KA     +  +V+  P+ A  YT+
Sbjct: 595 GNLKKAIADYTQAIRVD--PKYARAYTN 620


>gi|296102108|ref|YP_003612254.1| tetratricopeptide repeat protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295056567|gb|ADF61305.1| tetratricopeptide repeat protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 37/189 (19%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +    ++    T   
Sbjct: 83  GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLV--DETDF- 139

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                     RIG                       + ++Q Y    +W +AI    +  
Sbjct: 140 ----------RIG---------------------ALQQLLQIYQATSDWQKAIDTAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  K+  R   A      +L+     DM  +     +      NS   SI   +  ++  
Sbjct: 169 KLGKDKQRVEIAHFYCELALQQMGNDDMDKAMALLKKGAAADRNSARISIMMGRVFMASG 228

Query: 275 KKRKAEVIL 283
              KA   L
Sbjct: 229 DYAKAVESL 237


>gi|197286918|ref|YP_002152790.1| cellulose biosynthesis protein C [Proteus mirabilis HI4320]
 gi|194684405|emb|CAR46089.1| putative cellulose biosynthesis protein C [Proteus mirabilis
           HI4320]
          Length = 1228

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 87/283 (30%), Gaps = 44/283 (15%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL       A    +  L + +    A+  L + + R GDL + Q+     L+ +  +  
Sbjct: 272 ALNTGNLKQATTYFKQALTVDSQDAQALAGLGYVALRSGDLATGQKL----LNQASQSGG 327

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                 +Q      +   +  + ++ K               ++L+        +S    
Sbjct: 328 EQGQKWKQQAEDAGFYSQLREVQRQAKQGN----------TQQALDKL-SPLTYSSGEKG 376

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306
           + +           +  A  L  Q     A  +L ++++ +   E    A  Y  +    
Sbjct: 377 LSAH----------LLQADLLRKQGNLPAAYQLLSELYQQHSQNEKVISAYYYLLIQQGK 426

Query: 307 TVGKLKRALRLEEINKESVESLVIV-----------SKIALEMGSIDQAHAKAMLAMKIA 355
                  A +L      S+   +             ++ ALE G   QA      A +  
Sbjct: 427 NSQ----AEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQARQLLTQAQRKN 482

Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
           P+   ++L LA++  A    T       Q       D  +I+ 
Sbjct: 483 PQNNWVYLDLARLMIAEGDKTQADQLILQLERRQTRDANYIAA 525



 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 78/218 (35%), Gaps = 25/218 (11%)

Query: 86  KALY-TGLMSIAAHNIPLARKMHSYVS----------QQHTFHNEYLVYLLEVQIALAER 134
           +AL   G +++ + ++   +K+ +  S          +Q      +   L EVQ    + 
Sbjct: 297 QALAGLGYVALRSGDLATGQKLLNQASQSGGEQGQKWKQQAEDAGFYSQLREVQRQAKQG 356

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFES---CRIGDLNSAQRYATKALDISPDAP 188
               A +KL      P T       L     ++    + G+L +A +  ++         
Sbjct: 357 NTQQALDKLS-----PLTYSSGEKGLSAHLLQADLLRKQGNLPAAYQLLSELYQQHSQNE 411

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            V  A     +   + S+A   + ++    +     N + +  L   + +  + G    +
Sbjct: 412 KVISAYYYLLIQQGKNSQAEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQA 471

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                ++ +    +    +  A+ +I++  K +A+ ++
Sbjct: 472 RQLLTQAQRKNPQNNWVYLDLARLMIAEGDKTQADQLI 509


>gi|288935896|ref|YP_003439955.1| hypothetical protein Kvar_3037 [Klebsiella variicola At-22]
 gi|288890605|gb|ADC58923.1| TPR repeat-containing protein [Klebsiella variicola At-22]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 37/192 (19%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +  + ++     R  
Sbjct: 83  GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLS 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + ++Q Y    +W  AI    +  
Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE +R   A      +L+     D+  +     +      NS   SI   +  + + 
Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLKKGAAADRNSARVSIMMGRVWMEKG 228

Query: 275 KKRKAEVILEKI 286
              KA   LE++
Sbjct: 229 DYAKAVESLERV 240


>gi|206579869|ref|YP_002238984.1| tetratricopeptide repeat protein [Klebsiella pneumoniae 342]
 gi|290512960|ref|ZP_06552324.1| yciM [Klebsiella sp. 1_1_55]
 gi|206568927|gb|ACI10703.1| tetratricopeptide repeat protein [Klebsiella pneumoniae 342]
 gi|289774573|gb|EFD82577.1| yciM [Klebsiella sp. 1_1_55]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 37/192 (19%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +  + ++     R  
Sbjct: 83  GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLS 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + ++Q Y    +W  AI    +  
Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE +R   A      +L+     D+  +     +      NS   SI   +  + + 
Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLKKGAAADRNSARVSIMMGRVWMEKG 228

Query: 275 KKRKAEVILEKI 286
              KA   LE++
Sbjct: 229 DYAKAVESLERV 240


>gi|148981566|ref|ZP_01816453.1| hypothetical protein VSWAT3_04666 [Vibrionales bacterium SWAT-3]
 gi|145960809|gb|EDK26143.1| hypothetical protein VSWAT3_04666 [Vibrionales bacterium SWAT-3]
          Length = 284

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 23/233 (9%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFLNQ 213
            A+  L  +    G L+ A++   + L   PD      + +V  Y   +EW++AI + N 
Sbjct: 1   LALQQLAKDYMVSGFLDRAEKIFEQ-LVDEPDHKEGALQQLVAIYQQTREWNKAIHYGNI 59

Query: 214 KKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             K  K+  + RA +       +++    G+   +     ++L      + ASI   K  
Sbjct: 60  LVKLGKKKMKMRATVAHFWCELAMQEQADGNRSKALAHFKKALSEDPKCVRASIALGKFH 119

Query: 271 ISQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INK 322
           ++    +K    LE +      +     P ++  Y  L  E      +    L+     K
Sbjct: 120 LANEDYQKTIDCLEAVLEQDIDFISEVLPTLSECYHKLGHE-----AQLVEFLKACIQKK 174

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQA 370
             V + ++++++      I  A       +   P     + L    LA+ E+ 
Sbjct: 175 AGVSAELMLAQLVAHHEDIGSAQELLTKQLVKNPTMKGFYRLIDYHLAEAEEG 227


>gi|83749848|ref|ZP_00946817.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
           UW551]
 gi|207744708|ref|YP_002261100.1| tpr domain protein [Ralstonia solanacearum IPO1609]
 gi|83723485|gb|EAP70694.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
           UW551]
 gi|206596115|emb|CAQ63042.1| tpr domain protein [Ralstonia solanacearum IPO1609]
          Length = 700

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 65/230 (28%), Gaps = 43/230 (18%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            RI   + A   A +A+ ++P +     A+        +   A+    Q  +       +
Sbjct: 262 RRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQTDEALPHFEQAARLPGAVAED 321

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               L+ R++   + G   A+     ++L+    S+      A++  +  +  KA     
Sbjct: 322 ---ALVGRAILLMEAGRRDAALAAFDQALEQFPGSV-----QARAGRADARTFKAGD--- 370

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                   P+IA +   L       +  R                 + K  L++    QA
Sbjct: 371 --------PDIAALEACLADGERRSQRDRISA-----------HFALGKAYLDLQDPAQA 411

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393
                   +       +            +      W      A  P+P 
Sbjct: 412 FHHLDAGNRQKRSTFTY------------DGAASSRWMARIADAFPPEPH 449



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 3/150 (2%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +       + A E +   A      +   + +G    +   A  +++L    + A +  A
Sbjct: 165 LERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLA 224

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKES 324
           ++ I +++   A  +L+++    P HP    A        E     L  A +   +   S
Sbjct: 225 EAEIGRHRHEAALRVLDRLSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALAPHS 284

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            E+   ++     +G  D+A      A ++
Sbjct: 285 AETHHALAMALQALGQTDEALPHFEQAARL 314



 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 4/150 (2%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A       L++      A  +L F     G  + A   A  A+++SP        + +
Sbjct: 166 ERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAE 225

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +       A+  L++       +       L AR+           +   A +++ L 
Sbjct: 226 AEIGRHRHEAALRVLDR----LSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALA 281

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +S       A +L +  +  +A    E+ 
Sbjct: 282 PHSAETHHALAMALQALGQTDEALPHFEQA 311


>gi|295690833|ref|YP_003594526.1| cellulose synthase operon C domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295432736|gb|ADG11908.1| cellulose synthase operon C domain protein [Caulobacter segnis ATCC
           21756]
          Length = 1274

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 49/246 (19%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-------K 215
           E+    DL  A+R   +AL    +       +    +    ++ A T L +        +
Sbjct: 184 EALERKDLAGAERLFNQALRERSNDLDAAGGLGIIRLQQGRFADAETLLKRASGGASGEQ 243

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQN 274
           +  +     +    ++R+    + G    +  DA   +     + I A +   +SL +  
Sbjct: 244 RWGEALRSAQFFSTLSRARAAYEGGRFAQAEQDARPLANGQNPDRIEAQVLWGQSLAALG 303

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +   A    E  ++      +A                          +  E++  +++ 
Sbjct: 304 RPTDA----ETAFRAA----LATA-----------------------PQRPEAVAGLAQA 332

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA------NSHNTDKILYWTQSALHA 388
             +    D+A   A       P        A IE+A         +T        +AL A
Sbjct: 333 LADQARYDEASEIAANL--TGPTAGQTR--AAIERARANELQKRGDTFGSGAALSAALTA 388

Query: 389 MPDPLW 394
            P+  W
Sbjct: 389 NPNNPW 394



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 2/94 (2%)

Query: 124 LLEVQIAL-AERQYN-IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL     L         A +  + +L I      A+      + R GD + A     +A+
Sbjct: 615 LLSALARLYDTGDLAPQAAQTYDALLSINPNDYEALAGSARVAVRTGDYDRANDLLRRAI 674

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            I P+   +   + Q          A+    + +
Sbjct: 675 AIQPNNADLYYQLGQMEQARGRERAALKAFERAQ 708


>gi|282165368|ref|YP_003357753.1| protein kinase [Methanocella paludicola SANAE]
 gi|282157682|dbj|BAI62770.1| protein kinase [Methanocella paludicola SANAE]
          Length = 624

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 26/225 (11%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G +++A     +AL + P        +    +   +   AI    +      E+    
Sbjct: 400 ARGQVDAAIGEYREALRLDPGLADAHNNLGTALMAKGQSDGAIQEYREALATRPEY---- 455

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+      L  A +G++  +  +  E+L+L    + A I    +L       +A     K
Sbjct: 456 AMAHHNLGLSYACRGELGDAMGEYREALRLKPAFVEARINLGLALAISGCFDRAIEEYRK 515

Query: 286 IWKVNP-----HPEIANIY-THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              ++P     H  +A+         + V + + A     I+  +  +   +     EMG
Sbjct: 516 AAVLSPDDAVLHFNLASALRATGRIGDAVDEYRIA---TGIDPMNARAHYQLGLSLDEMG 572

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
            +  A ++ M A+++ P                    K     + 
Sbjct: 573 DLQGAISEYMSALRLNP-------------GEPGAAGKFRNALER 604


>gi|213982999|ref|NP_001135660.1| interferon-induced protein with tetratricopeptide repeats 5
           [Xenopus (Silurana) tropicalis]
 gi|197245770|gb|AAI68560.1| Unknown (protein for MGC:184922) [Xenopus (Silurana) tropicalis]
          Length = 473

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 35/201 (17%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220
              A+    +A+  +PD P     +       +E+           +   L +  K    
Sbjct: 153 YERAKGCFEEAVKGNPDDPEWNTGLATVVCRLEEFRGRNCPAFKSVSFQLLERAVKLNP- 211

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                +++ +  +L+  +      +     ++L+L  +        AK      K  +  
Sbjct: 212 ---KDSVIKVLLALKLQELKRQEEAMKHIKDALELTPDLPYVLRYVAKFYRRAGKFEETI 268

Query: 281 VILEKIWKVNP-----HPEIANIY------------THLLSENTVGKLKRALRLEEINKE 323
            +L+K   + P     H ++   Y             +   ++T         L E    
Sbjct: 269 RVLKKAVSITPNSGFLHHQLGLCYRQMIIQRKRTGKANYRGQDTQE----IKDLTEKAIF 324

Query: 324 SVESLVIVSKIALEMGSIDQA 344
             E  + + K  L     D A
Sbjct: 325 HFEMALEMKKTFLHAH-FDLA 344


>gi|54295320|ref|YP_127735.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
 gi|53755152|emb|CAH16645.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
          Length = 577

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 74/235 (31%), Gaps = 41/235 (17%)

Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  Q      E     A    E  + Q P  T       L +   ++GD+ +A  Y  +A
Sbjct: 8   LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             I+P+   +   +   Y  A +   AI +  Q  +   E+ +    L    +L N    
Sbjct: 66  RKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           +   + H  + ++    +   A+      L+ +N++  A                     
Sbjct: 122 NYQKALHHYVIAVNTEPDF-SAAHFNLGLLLLKNQQLSAAK------------------- 161

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                       +   +  +N +  E+   +  + LE   + +A       ++  
Sbjct: 162 -----------TQFNNVIALNPQHREAQFYLGILHLEDNLLSEAEQAFQKVLEQD 205


>gi|320580866|gb|EFW95088.1| hypothetical protein HPODL_3460 [Pichia angusta DL-1]
          Length = 595

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 4/198 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL++    +   A +      +      +  +Y    Q+       + A +  E      
Sbjct: 351 GLVNADKGDFASADEEIGKAIK--MNPEDPDIYYHYGQLFYLMGDLDKAKDNFEKSKLYN 408

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
               F    L   + R G+  +      +A    P +P V     +     ++++ A   
Sbjct: 409 PENVFGHIQLACIAYRKGESATCDELFREAKRKFPTSPEVPNYYGEILFDRQDYAAAAKQ 468

Query: 211 LN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
            +   + +         A+ LI +S       D+         + +L   S +A I   +
Sbjct: 469 FDTAARLQEVLPTFNIGALPLINKSAIFQVNKDIAGCEQLLKTACELDPKSEVARINLGQ 528

Query: 269 SLISQNKKRKAEVILEKI 286
             +   K + A  + E+ 
Sbjct: 529 IYLQAQKVKDAIELFEEA 546


>gi|295673180|ref|XP_002797136.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb01]
 gi|226282508|gb|EEH38074.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb01]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 91/260 (35%), Gaps = 37/260 (14%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   +A + +P+   +  A V+    AK+   A   L+  ++ A 
Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADAKQTEHARELLSTARREAG 675

Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250
                   +   R L N                              ++     +     
Sbjct: 676 TDRVWIKSVAFERQLGNTDQALDLVNQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
              + C  S+   + A++         KA  IL++       P+ A ++T  +  E    
Sbjct: 736 TGTRACPKSVPIWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 793

Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + +A  L     +E   S ++ S+    LE  +  +  +      K+     +F+ +A+
Sbjct: 794 NISQAKVLMAKALQEVPNSGLLWSESIWNLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 852

Query: 367 IEQANSHNTDKILYWTQSAL 386
           I        DK + W + A+
Sbjct: 853 IFWGERK-LDKAMTWFEKAI 871


>gi|194873813|ref|XP_001973282.1| GG16015 [Drosophila erecta]
 gi|190655065|gb|EDV52308.1| GG16015 [Drosophila erecta]
          Length = 931

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDEALR 686

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          +     + LK C  SI   I +A     +
Sbjct: 687 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTQGLKKCPTSIPLWILSANLEERK 746

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               KA  ILE+    N  P++A ++   +       LK
Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|124007529|ref|ZP_01692234.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
 gi|123987012|gb|EAY26768.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
          Length = 1434

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 48/275 (17%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE--------FAVYSLYFESCRIGDLNSAQRYAT 178
            ++ L  ++   A +    ML+   T            +Y+L   +  +G    A++Y T
Sbjct: 111 ARLYLQTKKMAKAEKIYAQMLESQKTALGEKSPEYALTLYNLANLNRDLGKPAEAKKYYT 170

Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ------KKKNAKEWNRN 224
           +AL I         PD     E +   Y    ++ +A+    +                 
Sbjct: 171 QALAIQKASRGEQHPDYLNTLEGLAFLYNQEGDYKKAMPLFEKIWQTYKATVKNSNPQYI 230

Query: 225 RAILLIAR---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK--A 279
           RA+  +A    ++   +K D +  Y++ ++ LK   + +     A+ +++ + + R   A
Sbjct: 231 RAVGNLAEIYFAVGKYNKADPL--YNETVQLLKATKSPLYGRYLASMAVLKEVQDRYDEA 288

Query: 280 EVILEKIWKV------NPHPEIANIY------THLLSE--NTVGKLKRALRLEEIN---- 321
           E + ++            HP+ A           L +E       +K+A  +        
Sbjct: 289 EKLYQEAITELKKDVGEQHPDYAQAMHDFGKLYELKNELNKAEQMMKKAQTIRAQAYGKN 348

Query: 322 -KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +  ESL  ++K+  +MG   QA A A  A++I 
Sbjct: 349 SPKYAESLNDLAKLYFKMGKHQQALAHAKQALEIR 383


>gi|224369177|ref|YP_002603341.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223691894|gb|ACN15177.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 760

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 70/247 (28%), Gaps = 44/247 (17%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPAT--REFAVYSLYFESCRIG 168
              N Y  +LL   I +A++    A      ++      P+   R   +  L  E     
Sbjct: 433 ALPNHYPAHLLLGNIHMAQKHEPEAETIFTKLITLAPDNPSAYYRMGVLRKLQKEKIE-- 490

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
               A +Y    L+I+P        ++  YV  ++ + AI       K   +   +++I+
Sbjct: 491 ----ALQYFNTILEINPGRMDAFGQIISIYVTDQQDAIAIKTCLSHLK-KLDAAIHKSIV 545

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                           +     +++K     I +    A    +Q K             
Sbjct: 546 HTILGQLYQSNNKTDLAEEAYKKAIKENPAYIPSYTALAAMYKAQGKIN----------- 594

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                                 +++   L   N     S  ++ ++       D A    
Sbjct: 595 --------------------DSIEQYEALIGENPGHASSHNLLGQLYEGRQQYDLAENHY 634

Query: 349 MLAMKIA 355
             A++I 
Sbjct: 635 KKALEIN 641



 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 80/262 (30%), Gaps = 9/262 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++  A  M   +  ++    +   YL+  +     ++   A +     ++       A  
Sbjct: 215 DLESAEGMLKIIRDKN--PEDPEAYLMLGKFYSGRKENRKAEQAFLSAIEKDPENLNAHL 272

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L      IG  + A+++  KAL I P+      A  +      +  +A   +++  K+ 
Sbjct: 273 MLARFYTHIGKNSQAEKFIRKALLIDPENFEAKMAYSEFLFAHNKNEQAEKIIDEVLKDR 332

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            ++       L  +      K +   +       L    +S   +     ++    K  +
Sbjct: 333 PKF----LTALTVKGKILISKKEFKPAIEIFQSLLNEEPDSSDINFLLGTAMFETGKIER 388

Query: 279 AEVILEKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A   L K  +  P  H         +    +         ++         + +++  I 
Sbjct: 389 ALPYLSKALERKPSFHQARFLRAQIYFRDMDFFSAKTETEKIINALPNHYPAHLLLGNIH 448

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
           +      +A       + +AP 
Sbjct: 449 MAQKHEPEAETIFTKLITLAPD 470



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 90/272 (33%), Gaps = 16/272 (5%)

Query: 125 LEVQIALAERQYNIAHEK---LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L +Q  +  RQ           E +L I + +  A+  L          ++AQ+    A+
Sbjct: 134 LYLQAGILARQNKGIEHTKLLYEKILDIDSRQIPALLVLSKIYIAEKKWDAAQKALKTAI 193

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           D  PD   + +++   YV   +   A   L  K    K      A L++ +      +  
Sbjct: 194 DFDPDNMALQKSLYLLYVDKNDLESAEGML--KIIRDKNPEDPEAYLMLGKFYSGRKEN- 250

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---- 297
              +    + +++    ++ A +  A+      K  +AE  + K   ++P    A     
Sbjct: 251 -RKAEQAFLSAIEKDPENLNAHLMLARFYTHIGKNSQAEKFIRKALLIDPENFEAKMAYS 309

Query: 298 --IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             ++ H  +E      K    + +   + + +L +  KI +       A       +   
Sbjct: 310 EFLFAHNKNEQAE---KIIDEVLKDRPKFLTALTVKGKILISKKEFKPAIEIFQSLLNEE 366

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           P       L       +   ++ L +   AL 
Sbjct: 367 PDSSDINFLLGTAMFETGKIERALPYLSKALE 398


>gi|154495172|ref|ZP_02034177.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC
           43184]
 gi|154085722|gb|EDN84767.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC
           43184]
          Length = 667

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 50/149 (33%), Gaps = 12/149 (8%)

Query: 213 QKKKNAKEWNR--NRAILLIARSLENA---DKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +K +      R   +        + N       D  A+     ++LKL    + A +   
Sbjct: 512 KKLREEIHAQREIQKEYAHEYYLMGNECITKAHDPNAAIRSFDKALKLYPEFVDAWVRKG 571

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINK 322
            +L+      +A   L +  ++NP    A       Y  L   +    +   ++  ++  
Sbjct: 572 VTLLDMGDGFQAVTCLNEAVRLNPKSFKARYNRGKSYLQLKYYDEA--VSDFMKAVDLKP 629

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           +   +   +++  L +G  + A     +A
Sbjct: 630 KHAAAHEYLAEAFLHIGEEELARQHQDIA 658


>gi|312381341|gb|EFR27109.1| hypothetical protein AND_06385 [Anopheles darlingi]
          Length = 833

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 107 GQVKEAEECYNIALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 163

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ + A+    +  +
Sbjct: 164 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 223

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 224 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 273



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+D+ P+ P     +        +   A    N   +       N A  L   +    
Sbjct: 83  RRAIDLQPNFPDAYCNLANALKEKGQVKEAEECYNIALRLCP----NHADSLNNLANIKR 138

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 139 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 196

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 197 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 256

Query: 353 KIAPR 357
           K+ P 
Sbjct: 257 KLKPD 261


>gi|302785157|ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
 gi|300157948|gb|EFJ24572.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
          Length = 1041

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 5/126 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +   ++  Y+ A       +Q    P       Y L     ++ DL SA     K LD+
Sbjct: 310 ARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDV 369

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+     + V   ++      +A+    +  K +       A + I   L + D    +
Sbjct: 370 HPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSP--RDVDAWIEIGELLVSTDFSAAL 427

Query: 244 ASYHDA 249
            ++  A
Sbjct: 428 DAFKTA 433



 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 13/221 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDISPDAPWV 190
            Q + A +  + +LQ+      A+ +L        D  S Q       +A +I P     
Sbjct: 209 GQLSKARQAFQRVLQLDPENLDALVALGIMDINANDAESVQEGTKKMLEAFEIYPYCATA 268

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDA 249
              +   Y   ++       +     +      ++++   +ARS  +    D  A+Y+ A
Sbjct: 269 LNHLANHYFYTEQHGVVEQLMETALASTDNALIKSQSYFNLARSYHSKGDYDKAAAYYRA 328

Query: 250 -IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLL 303
            ++ LK   + I+      +  +  N  + A    EK+  V  HPE         Y HL 
Sbjct: 329 SVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDV--HPENCETLKVVGYIHLQ 386

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                  L+   +  +++   V++ + + ++ L       A
Sbjct: 387 QGRNDKALESFRKAAKVSPRDVDAWIEIGEL-LVSTDFSAA 426


>gi|227879098|ref|ZP_03996987.1| tetratricopeptide repeat family protein [Lactobacillus crispatus
           JV-V01]
 gi|256850261|ref|ZP_05555690.1| TPR repeat-containing protein [Lactobacillus crispatus MV-1A-US]
 gi|262046347|ref|ZP_06019309.1| TPR repeat-containing protein [Lactobacillus crispatus MV-3A-US]
 gi|293379770|ref|ZP_06625902.1| tetratricopeptide repeat protein [Lactobacillus crispatus 214-1]
 gi|227861339|gb|EEJ68969.1| tetratricopeptide repeat family protein [Lactobacillus crispatus
           JV-V01]
 gi|256712898|gb|EEU27890.1| TPR repeat-containing protein [Lactobacillus crispatus MV-1A-US]
 gi|260573218|gb|EEX29776.1| TPR repeat-containing protein [Lactobacillus crispatus MV-3A-US]
 gi|290923679|gb|EFE00550.1| tetratricopeptide repeat protein [Lactobacillus crispatus 214-1]
          Length = 415

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 21/230 (9%)

Query: 146 MLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           +  +P +    + SL  ++      G + +A+    +AL ++P+   +   + +   L+ 
Sbjct: 89  LYNVPESSSAYLDSLLVQADYYQTNGLIETAKDKLIRALQLAPEEDAIKFGLAEIEYLSG 148

Query: 203 EWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + +A+     L +++    E N  + +      L N ++   +     A   L +    
Sbjct: 149 NYEQALELYQDLIKRQSTFSEVNLYQRLFATFAKLGNYEEAAKVI-REHANSILDIDSK- 206

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314
                 A   L+S    ++A   L+++ + +P     +P +A  Y H    +    L+ A
Sbjct: 207 ----YEAGLVLLSVGDDKQAIKFLDEVIEQSPDYVNAYPLLAQAYDH--QHDNEQVLRTA 260

Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 N E  E+L  + ++ A  +  +D A       +K+AP      +
Sbjct: 261 QAGLAYN-ELDETLYSMGARAAANLNELDTARDLLEKGLKVAPDNSDLRM 309


>gi|307153280|ref|YP_003888664.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306983508|gb|ADN15389.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 1048

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 92/297 (30%), Gaps = 47/297 (15%)

Query: 91  GLMSIAAHNIPLARKMHSY----VSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLE 144
           G       +   A K          +   F    E L  L    I      Y  A +  E
Sbjct: 375 GQAHFNLGDYAAAIKYQKNRLELARKIEDFSQQIEALNGL--GDIYYQLDDYEQAVKFYE 432

Query: 145 MMLQIPATR------EFAVYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPW-VTE 192
             L I   +         + +L   + +  D + A  YA ++LD++     P   W    
Sbjct: 433 QGLAISKNQEKYEKVLETLNNLGNVARQKNDYDKAIDYAQQSLDLARKIVNPYEEWKALI 492

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-----DKGDMIASYH 247
           ++   Y    +  +AI +L Q     K++       L    +  A     +    I  Y 
Sbjct: 493 SLGGTYKYLGD-KKAIEYLQQSLAITKKFPTRGQEFLTLEYMGLAYRALGENEKAIEVYQ 551

Query: 248 DAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEV-------ILEKIWKVNPHPEIAN 297
            A+    ++               +       ++AE        ILE IWKV    +I  
Sbjct: 552 KALVQARAINDRPAKGTILSHLGSAYFESGNLQEAEKILRESINILESIWKVLKKEDIYK 611

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           I      ++T  +L+    L   NK +          ALE+    +A A A    + 
Sbjct: 612 ISLFERQKDTYLELQ--QVLIAENKPNE---------ALEISERGRARAYAERLAER 657


>gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310819976|ref|YP_003952334.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
            DW4/3-1]
 gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1369

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 102/284 (35%), Gaps = 21/284 (7%)

Query: 76   LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
            L K +  KG +A+   L         LA    + +++  +     L  L   + A  E +
Sbjct: 815  LRKGDAAKGLQAVEQAL-----DEKALAGLGPAEIARARSLKGVALAGLFRFKEAETELK 869

Query: 136  YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
             +        + + P +       L        D   A     +A           E  +
Sbjct: 870  DS--------LKKDPDSIFIKAQ-LAMVLRANRDFAGALPLYEEASKEEAGVIEYAEGYI 920

Query: 196  QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
               V+  + S A+  +     NA+  N  R  LL  R  ++ D   ++++    + ++K 
Sbjct: 921  TSLVMLGKMSDALKAVEAA--NARFTNDARIALLFGRIDDSRD--QLVSAEGHYLRAIKE 976

Query: 256  CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRA 314
                  A++   +  +   +   A V LE+  K  P+          L       +L   
Sbjct: 977  DPKLFEANLYLGRFYLRLRRTGDARVQLEEAAKKAPNDAGVRAGMGELALAENNVRLAEE 1036

Query: 315  LRL--EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              L   E+N    ++ + +S++AL  G ++ A AK+  A+++ P
Sbjct: 1037 EFLRAAELNPSLADAQLGLSRVALLTGDLETARAKSTRALELDP 1080



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 95/269 (35%), Gaps = 17/269 (6%)

Query: 130  ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            ALAE    +A E+     ++  +   A   L   +   GDL +A+  +T+AL++ P    
Sbjct: 1025 ALAENNVRLAEEEFLRAAELNPSLADAQLGLSRVALLTGDLETARAKSTRALELDPFL-- 1082

Query: 190  VTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            + +  +Q+        +   AI  L + K+           L         +KG++  + 
Sbjct: 1083 LKDGRLQRGTVLWRLGQLDEAIVELEKAKEEDPRSVNIPITL----GAVLYEKGELAGAE 1138

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTH 301
             + + +L    ++  A    A     + +   A   ++   +  PH       +  IY  
Sbjct: 1139 KNLMLALNREPSNHEALYYVAMVKAKRAEYTGAIDQMKSAVEKAPHRADYHYALGVIYRD 1198

Query: 302  LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEI 360
               E     +       + +    ++   + K  LE   +D+A      A+   P RK +
Sbjct: 1199 A--ERLPEAIAEWKETIKRDPNHADTYEQLGKAYLETNKMDEAIPAFESALAADPKRKRV 1256

Query: 361  FLLLAQIEQANSHNTDKILYWTQSALHAM 389
               +  +  +     + I  + ++   A 
Sbjct: 1257 LGAIGDVFFSEGRWDEAIRRYEKALKEAP 1285


>gi|110805283|ref|YP_688803.1| tetratricopeptide repeat-containing protein [Shigella flexneri 5
           str. 8401]
 gi|110614831|gb|ABF03498.1| putative heat shock protein [Shigella flexneri 5 str. 8401]
          Length = 371

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 65  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 120

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 121 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 148

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 149 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 208

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 209 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 259

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 260 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 304


>gi|320354473|ref|YP_004195812.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320122975|gb|ADW18521.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 581

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 102/283 (36%), Gaps = 21/283 (7%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  M  Y        ++  + LL  ++ L   Q   A   LE +L        A   +  
Sbjct: 138 AEAMRQYQLISDRHPDDPAILLLLAEMYLNANQPERARPLLERILAQDPAAYLAHVLMAR 197

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                     A  + TKAL+ +  +  +   + + YV A +   A+       +  ++  
Sbjct: 198 LCQLQALPEEAIEHYTKALERN-WSSELQMELGELYVKAGQHDEAVRLYRDIIERDEQNE 256

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             R  L+    L+  D   +       ++S       +  +I  A+    Q K  KA  I
Sbjct: 257 GARVALIHVYLLQKKDDQALEELNR--LKSYAEQPQRVDLTI--ARLYAKQKKYDKAVAI 312

Query: 283 LEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +EKI     H E        +A ++  +  E     L++  +++    E +++L +  +I
Sbjct: 313 VEKIL----HKENLSEARYFLAVLF--VQQEKYGRALRQVRQIDREAPEYLDALFLQVRI 366

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANSHNT 375
             E   + +A       +  A     E+++LLA + Q    + 
Sbjct: 367 LREQNKLAEAKQLLEEHIAAADTRNAEMYILLAALYQDLGRDD 409


>gi|331092952|ref|ZP_04588186.2| TPR domain-containing protein [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022580|gb|EGI02637.1| TPR domain-containing protein [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 548

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 82/232 (35%), Gaps = 12/232 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L    D 
Sbjct: 66  QIAEYMGADQSALETALVWAKNAPTSLEAQRAAAIQLARAGRYDDSLAYMERVLQGQGDT 125

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +   A+      +   +  +   ++     K  N ++  L+  ++L     GD   S  
Sbjct: 126 HFDFLALSAAETDSDTRNGLLKSFDRLL--GKYPNNSQ--LIFGKALLLQQNGDAEQSLK 181

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  +   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 182 L-LEDNPPKEGEVAPILLRARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 238

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           E         +   L +   +  E    ++ + LE  + D+A       ++ 
Sbjct: 239 EQNRMEDAKVQFSSLLKQYPDDDELRFSLALVCLEAKAWDEAAGYLEELIER 290


>gi|327404890|ref|YP_004345728.1| hypothetical protein Fluta_2911 [Fluviicola taffensis DSM 16823]
 gi|327320398|gb|AEA44890.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 364

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 20/178 (11%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAV--YSL---YFE--SCRIGDLNSAQRYATKALDI 183
             ++ YN A +     +++  +   A           E     I D  +       AL  
Sbjct: 162 FLQQDYNAAIKYFTKSIELDPSSPMAYNDRGSCYRMQENYPKAIEDYEA-------ALRK 214

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P+  +V   V       K++S A+   N+        + N  +    R +   +KG + 
Sbjct: 215 NPNLAFVLNNVGTTKKKMKDYSGALIAFNRAIS----VDVNFFLAYNNRGVALLEKGSLD 270

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
            +  D  +++++      A+   A     +   +KAE +  K   ++  P  A+ Y +
Sbjct: 271 DAIKDFEKAMQINPKYAPAASNLAGIYFKRKDFKKAEELASKAIAID--PNYASAYVN 326


>gi|322707980|gb|EFY99557.1| DnaJ and TPR domain protein [Metarhizium anisopliae ARSEF 23]
          Length = 520

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 94/306 (30%), Gaps = 39/306 (12%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A+   L++ A           + V+Q           L   Q  LA  + + A    +  
Sbjct: 9   AVTASLLASA----------TNLVAQDIPVDLPVSTLLTSAQSHLARGETSEALAYYDAA 58

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           +    +    ++        +G  N A     + L++ P        + +      +W  
Sbjct: 59  IAKDPSNYITLFKRATTYLSLGRSNQASEDFGRVLELKPGFEGAHIQLAKIKAKVADWEG 118

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A +     K++ +       ++ +A +   AD  +      +  E +       +A + A
Sbjct: 119 ARSEYMAAKRSDESTE----LVELAEAQGAADLAEAAERDKNWEECISHA---GVAILVA 171

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           +++   + ++ +                    +     E  +G L   L+L      + +
Sbjct: 172 SRAPSLRERRSRCR------------------FQRGEIEEGMGDLHHVLQL---RPGNTD 210

Query: 327 SLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
             +++ +     +   D A A+A   +   P  +I   L + E+       K+       
Sbjct: 211 PHILISATTVYALADFDNAIAQAKKCLHSDPDSKICQTLHRQERRLQKAFQKVESQLNRG 270

Query: 386 LHAMPD 391
              +  
Sbjct: 271 QTTLAG 276



 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 47/138 (34%), Gaps = 21/138 (15%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +  ++    +   A +Y  +A+++ P++ W      +  +  +E+  AI  L +  +   
Sbjct: 320 MLCQAYSESNHKDASKYCEEAIELDPESFWGLIYKGKSLLKREEYDAAIQTLEKAAEIRP 379

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +   ++   ++ ++     +      Y     +    +  I A+             RKA
Sbjct: 380 D-KSDKVHPILQKAQIALKRSKTKDYYKILGVANDADERQIKAAY------------RKA 426

Query: 280 EVILEKIWKVNPHPEIAN 297
                       HP+ A 
Sbjct: 427 SK--------QYHPDKAE 436


>gi|296200947|ref|XP_002747829.1| PREDICTED: pre-mRNA-splicing factor prp1-like [Callithrix jacchus]
          Length = 1022

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 660 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 717

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                     A  
Sbjct: 718 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIKAAQD 777

Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L + +                  M  +     + LK C +S    +  ++     
Sbjct: 778 LCEEALRHYEDFPKLWMMKGQIEEQKELMEKAREAYNQGLKKCPHSTALWLLLSRLEEKI 837

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331
            +  +A  ILEK    NP +P +      L     +  +  A  L     +E   S ++ 
Sbjct: 838 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 895

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           S+ A+ + +  Q   K++ A+K       + L +A++  +      K   W    +    
Sbjct: 896 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 953

Query: 391 D 391
           D
Sbjct: 954 D 954


>gi|261401625|ref|ZP_05987750.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970]
 gi|313667745|ref|YP_004048029.1| periplasmic hypothetical protein [Neisseria lactamica ST-640]
 gi|269208261|gb|EEZ74716.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970]
 gi|309378649|emb|CBX22720.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313005207|emb|CBN86640.1| putative periplasmic hypothetical protein [Neisseria lactamica
           020-06]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 107/349 (30%), Gaps = 53/349 (15%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELARNYQSAGLVDRAEQIF---LGLQDGEMAHEARQHLLHIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAK 268
                + + +    A      +  +  K +  A+      A+E+ K C     A++    
Sbjct: 169 RLLSHDEQTYQFEIAQFYCELAQASLFKSNFDAARFHIGKALEANKKC---TRANMILGD 225

Query: 269 SLISQNKKRKAE---VILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRALRL 317
                     A      +E+    +      ++   Y      E  + +L    +    L
Sbjct: 226 LEYRLGNFPAAVDAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLDRLTGYMQTFPEL 285

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQANS 372
           + I     +SL++  +         +A   A+  ++  P    ++ L    L+ +  A  
Sbjct: 286 DLIQVVYEKSLLLKGE--------KEAAQTAVELVRRRPDLNGVYRLLGLKLSDLNPAWK 337

Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            + D +       L      ++   + +  S    W    P       F
Sbjct: 338 ADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQAFFWH--CPACNKWQTF 382


>gi|291278873|ref|YP_003495708.1| hypothetical protein DEFDS_0458 [Deferribacter desulfuricans SSM1]
 gi|290753575|dbj|BAI79952.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 530

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 84/224 (37%), Gaps = 33/224 (14%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
             N   A K+   +     + N+  + L + +  +  ++Y+ A +     L+        
Sbjct: 41  TGNYDKALKL---IDDLLNYDNDPYLVLKKGEYLIRLKRYDEARDLYLKFLEKED--YPG 95

Query: 157 VYSLYFESC----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           +  LY  +        D +SA +Y +K + I     ++ E +++ Y L  ++++AI  L+
Sbjct: 96  I--LYNLANIYKTYYKDYDSAIKYLSKLIKIEKREGYLLE-LMKLYELKGDYAKAIGVLD 152

Query: 213 Q--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKS 269
           +      +  +   R  L +   LE            D  ++ K   +    ++   A  
Sbjct: 153 ELIGLNPSSAYYYQRGTLYLKLGLE-------KKGLKDLEQAYKN--DKYPLALYKLADY 203

Query: 270 LISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSEN 306
            + +  K KA   L  +  VN HPE       +  +Y  L   +
Sbjct: 204 YLKKGDKEKAVKYLSSV--VNKHPEQASLKFQLGRLYMDLKEYD 245


>gi|147806293|emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]
          Length = 799

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 11/191 (5%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCDNSIM 261
            A        + A+      A LL        +    +G ++++     E+  LC     
Sbjct: 280 EAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGMVMSACEHYREAAILCPTHFR 339

Query: 262 ASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           A      +L    + R A   LE     K    + H ++A+   H + E     +    +
Sbjct: 340 ALKLLGSALFGVGEYRAAVKALEEAIFMKADYADAHCDLASA-LHAMGEGEKA-IPVFQK 397

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
             ++    V++L  +  + ++MG   +A       + + P      L   +    +   +
Sbjct: 398 AIDLKPGHVDALYNLGGLYMDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAE 457

Query: 377 KILYWTQSALH 387
           +     + AL 
Sbjct: 458 EAKKALKEALK 468


>gi|46201785|ref|ZP_00054372.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 720

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 81/269 (30%), Gaps = 47/269 (17%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              + R+ + A       L + A    A++ L     + G L  A  +   AL + P+  
Sbjct: 70  ALFSVRRLDEAEAAYRRALALNAEIPEALFGLGNTLAQTGQLEEALAFHRNALALRPNFV 129

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----EWNRNRAILLIARSLE-------- 235
                +            A+  L +             +  RA+L      E        
Sbjct: 130 EALANMAGVLGRLGRRDEAVEKLRRAVAERPGEASLHADLGRALLASGHGAEADVEVCRA 189

Query: 236 -----------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                               +G M  +   A  +++L  N   A +  A+ L    ++ +
Sbjct: 190 LRLAPDSPPVLVAASDVIRARGRMEEALEYADRAVELAPNYPPAVLVLARQLRVLGRRDQ 249

Query: 279 AEVI------LEKIWKVNPHPEIANIYTHLLSENTVGKL----KRALRLEEINKESVESL 328
           A         +E          +A+++    + N + +L        RL     +  E  
Sbjct: 250 AAETYLRLAGIEGA-------GVAHLFDAANALNEMSRLPEAVALYQRLLAREHDHSEVW 302

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +     E+G +++A      A +++P 
Sbjct: 303 NNLGNALRELGELERAAECYEAAERLSPD 331


>gi|237808311|ref|YP_002892751.1| Tetratricopeptide domain-containing protein [Tolumonas auensis DSM
           9187]
 gi|237500572|gb|ACQ93165.1| Tetratricopeptide domain protein [Tolumonas auensis DSM 9187]
          Length = 385

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 106/340 (31%), Gaps = 63/340 (18%)

Query: 98  HNIPLARKMHSY--VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H         +   + L  L   +  +A    + A   L  +L        
Sbjct: 83  GEVDRAIRIHQNLVARCLDSTEQQNLSMLELARDFVAAGLLDRAENVLISLLNDDE---- 138

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                                A  A  +          ++Q Y    EW +AI   ++  
Sbjct: 139 --------------------LADDARKM----------LLQIYEQLNEWQKAIDIADK-- 166

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            ++K+ +R  A      +  +A + D   +      +LK     + A +  A+  I Q +
Sbjct: 167 LSSKKHHRVVAHYYCQLAENDASQSDFKTAASRLKRALKSDPQCVRAQMLLAQLYIKQQQ 226

Query: 276 KRKAEVILEKIWKVNPHPEIANIYT-HLLS-----ENTVGKLKRALRLEEI--NKESVES 327
             +A   +++I      PE+++ +           ++ +     A  L     + ++   
Sbjct: 227 YDQAIKHIDQI------PELSSAFASEAWKLLQQCKSHLDDRSFAAILVRWLESTQNTTV 280

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILYWTQSAL 386
            + +++       +  A A  +  +K  P  + F  L+    +A   +          +L
Sbjct: 281 ALALAESIQAQQGVRDAEAFILRHIKRNPTMKGFHRLMTYQLEAMHDDKAAESISLLRSL 340

Query: 387 H----AMPDPLWISDDGYLSSV---WLPLSPISKTLCYFE 419
                A+  P++  +    SS    W    P  K      
Sbjct: 341 VEKQMAVK-PIYRCEHCGFSSKVIFWH--CPSCKQWGSIS 377



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 17/199 (8%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
               + A       L +  D      A+   +    E  RAI           +    + 
Sbjct: 48  SEQPDKAVDLFIDLLQVDTDTIDTHLALGNLFRQRGEVDRAIRIHQNLVARCLDSTEQQN 107

Query: 227 ILLIARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           + ++  + +    G +  +       +   +L D+   A     +     N+ +KA  I 
Sbjct: 108 LSMLELARDFVAAGLLDRAENVLISLLNDDELADD---ARKMLLQIYEQLNEWQKAIDIA 164

Query: 284 EKIWKVNPHPEIANIYTHLLSENT--------VGKLKRALRLEEINKESVESLVIVSKIA 335
           +K+     H  +A+ Y  L   +           +LKRAL+    + + V + ++++++ 
Sbjct: 165 DKLSSKKHHRVVAHYYCQLAENDASQSDFKTAASRLKRALK---SDPQCVRAQMLLAQLY 221

Query: 336 LEMGSIDQAHAKAMLAMKI 354
           ++    DQA        ++
Sbjct: 222 IKQQQYDQAIKHIDQIPEL 240


>gi|83645522|ref|YP_433957.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83633565|gb|ABC29532.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 884

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 93/311 (29%), Gaps = 26/311 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYL---------LEVQIALAERQ-------YNIAHE 141
             +  A    +         +E +  L         L  +               ++A  
Sbjct: 109 GELNEAHVGLAKSLLLLGKVDEAMTELNKIEEPNATLSARADNVRGDIELSKRNTDVART 168

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
                LQ       A+  L   S    D + A     KA +++P+   V     +   L 
Sbjct: 169 LYNKALQSDPKSFQALLGLSKASFLQNDKDGAAAELKKAEELAPNDSDVWLWKAKMAALE 228

Query: 202 KEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           K +  A     +  ++  +++     +   +         +G    ++       K    
Sbjct: 229 KNFPAAEDAYVRALEDIGQYDLMTLQKYQTISELIEVLRAQGKHAEAFTYQEVLDKSGPG 288

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317
           SI  S  +A   +      KAE  L+ I +  P H E A +   ++             L
Sbjct: 289 SIKNSYVSALEAVKNKDYAKAEEYLKGILEKAPGHRE-AGVLLGMVKYQQGDWEAADKYL 347

Query: 318 EEINKESVESLVIVSKIA--LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
            +   E V S V  +  A  L++   + A        K  P       +A++E  N  + 
Sbjct: 348 SQFATEDVNSAVTKALAATKLKLQQPEAAARLVEKLPKEDPDSLSIYGVAELESGNLASG 407

Query: 376 DKILYWTQSAL 386
            +     + AL
Sbjct: 408 VEA---LEKAL 415



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 44/272 (16%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L+ +L  Q      ++  A    E++ +         Y    E+ +  D   A+ Y   
Sbjct: 261 ELIEVLRAQ-----GKHAEAFTYQEVLDKSGPGSIKNSYVSALEAVKNKDYAKAEEYLKG 315

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI--------- 230
            L+ +P        +        +W  A  +L+Q           +A+            
Sbjct: 316 ILEKAPGHREAGVLLGMVKYQQGDWEAADKYLSQFATEDVNSAVTKALAATKLKLQQPEA 375

Query: 231 -ARSLENADKGDMIAS------------YHDAIESLK--LCDNSIMASIC--AAKSLISQ 273
            AR +E   K D  +                 +E+L+  L  +S  A +     K+ ++ 
Sbjct: 376 AARLVEKLPKEDPDSLSIYGVAELESGNLASGVEALEKALALDSSNAVLVDKLGKAYLAN 435

Query: 274 NKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            +  KA  +L      NP  E     + + Y      +          +E+  K    S 
Sbjct: 436 GQADKAITLLSDSKDKNPKSEGIRALLVSAYAKAGKGDQAK-----TEIEDWKKAIPNSA 490

Query: 329 VIV-SKIAL--EMGSIDQAHAKAMLAMKIAPR 357
           +   ++ A    +   D+A      A KI+P 
Sbjct: 491 LAFNAEGAYYSSLDQFDKAEKAFEQAKKISPD 522



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 105/319 (32%), Gaps = 51/319 (15%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++     +   A K  S  + +    N  +   L       ++    A    ++  + P
Sbjct: 331 GMVKYQQGDWEAADKYLSQFATEDV--NSAVTKALAATKLKLQQPEAAARLVEKLPKEDP 388

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            +   ++Y +       G+L S      KAL +      + + + + Y+   +  +AIT 
Sbjct: 389 DS--LSIYGVAE--LESGNLASGVEALEKALALDSSNAVLVDKLGKAYLANGQADKAITL 444

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L+  K    +    RA+L+ A +      G    +  +  +  K   NS +A        
Sbjct: 445 LSDSKDKNPKSEGIRALLVSAYAK----AGKGDQAKTEIEDWKKAIPNSALAFNAEGAYY 500

Query: 271 ISQNKKRKAEVILEKIWKVNP---HP------------------------------EIAN 297
            S ++  KAE   E+  K++P    P                              ++A 
Sbjct: 501 SSLDQFDKAEKAFEQAKKISPDLKTPYRNSILLFAKTQSWNKLLDETKSAVKQFPEDLAL 560

Query: 298 IYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           I     + N + KL  A      +      +    + +++     G  D+A      A  
Sbjct: 561 IRALFEAANKLDKLGEATSYLEEIANNVTTTAAPSLTLAEFYARTGEFDKARQFLNKAKG 620

Query: 354 IAPR----KEIFLLLAQIE 368
           +       +   LL+A +E
Sbjct: 621 LDSAGSQLESTTLLVATLE 639



 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 3/134 (2%)

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               + +L+  + ++  L  A  Y  +  +        +  + + Y    E+ +A  FLN
Sbjct: 557 DLALIRALFEAANKLDKLGEATSYLEEIANNVTTTAAPSLTLAEFYARTGEFDKARQFLN 616

Query: 213 QKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           + K       +      ++                +   A E  K   + I A +   K+
Sbjct: 617 KAKGLDSAGSQLESTTLLVATLEIPSLIKAQKNEDARKLATEVAKTLPDRIEARLLPVKT 676

Query: 270 LISQNKKRKAEVIL 283
               + +     +L
Sbjct: 677 EFLTDNEAAGVKLL 690



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 1/98 (1%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            N      L      A    + A E+ E + QI      A+ +L +     GD   A   
Sbjct: 765 PNSPQTITLLAMGYQANNMPDKAIEQYERLRQIRPNDAVALNNLSWLYFEKGD-ARALEL 823

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           A  A  + P++  + +          +   A+  L + 
Sbjct: 824 AENAYKLQPESAAIADTYGWIVYKNGDAKSALPILKKA 861


>gi|332975534|gb|EGK12424.1| hypothetical protein HMPREF9374_1491 [Desmospora sp. 8437]
          Length = 482

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 7/124 (5%)

Query: 137 NIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             AH      L+  P      + Y  Y +S +  D + A+ +  KAL++ P+  +    +
Sbjct: 90  EEAHAAFRRALELDPNLSIAHLWYGYYCQSVKE-DWDRAEVHLRKALELEPENEYYMTTL 148

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            +       ++ A T   +  + A    R   +     +           +     E+L+
Sbjct: 149 AEFEEAQGNFTEAETLFRRALEIAPTEARVFRV----YAEYLHRNHRYDEARPLLREALR 204

Query: 255 LCDN 258
           L  +
Sbjct: 205 LEPD 208



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 59/156 (37%), Gaps = 6/156 (3%)

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +     E L++  +   +     +  +  ++  +A     +  +++P+  IA+++ 
Sbjct: 54  QYAKALELIREFLRVNPDHAWSVAFEGRVFVMLDQVEEAHAAFRRALELDPNLSIAHLWY 113

Query: 301 HLLSENTVGKLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               ++      RA     +  E+  E+   +  +++     G+  +A      A++IAP
Sbjct: 114 GYYCQSVKEDWDRAEVHLRKALELEPENEYYMTTLAEFEEAQGNFTEAETLFRRALEIAP 173

Query: 357 R-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               +F + A+    N    +      + AL   PD
Sbjct: 174 TEARVFRVYAEYLHRNHRYDE-ARPLLREALRLEPD 208



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 39/106 (36%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            ++ A   L   L++    E+ + +L       G+   A+    +AL+I+P    V    
Sbjct: 123 DWDRAEVHLRKALELEPENEYYMTTLAEFEEAQGNFTEAETLFRRALEIAPTEARVFRVY 182

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            +       +  A   L +  +   +    R +     SL+ +D+ 
Sbjct: 183 AEYLHRNHRYDEARPLLREALRLEPDNESIRGLYFSNYSLQESDQA 228


>gi|330951014|gb|EGH51274.1| peptidase aspartic, active site protein [Pseudomonas syringae Cit
           7]
          Length = 654

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 95/315 (30%), Gaps = 41/315 (13%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAA----HNIPLARKMHSYVSQ---QHTFHNEYLVY---L 124
              K     GY      L + A      +   ARK  +   +         E L     L
Sbjct: 89  RFPKARPKPGYLEGNQALRAYANRDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRL 148

Query: 125 LEVQIALAERQYN--------IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            E Q A+ E +             + ++  + +              +   GD ++A   
Sbjct: 149 DEAQAAINEAEQALGPQQVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDNDTAVSE 202

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A +A+   P      + +V   +   +++ A +   +        N N A LL+ R    
Sbjct: 203 AREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMR 258

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHP 293
              GD   +  D  ++  +   ++      A    +  +  +A   L++        P  
Sbjct: 259 QRLGDQDGARQDFAQA--MAGGNLPLRE-QASLYAAMGQPSEALQRLQQARDAGELQPGD 315

Query: 294 EIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHA 346
           E+   Y    + +    +   KR  R   +      ++  S +  S  A  +    +   
Sbjct: 316 EVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSDDAQAIAYFKRVLD 375

Query: 347 KAMLAMKIAPRKEIF 361
                    P +++F
Sbjct: 376 YQQTGDLQMPAQQVF 390



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 63/216 (29%), Gaps = 25/216 (11%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L    +L                 TG  ++A  +   A        +       Y   L+
Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
              IA    QY  A         +    AT          +  R+GD + A++   +A+ 
Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234
              + P   +A +  Y    + S A+  L Q +   +         A  L        +L
Sbjct: 277 -GGNLPLREQASL--YAAMGQPSEALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGAL 333

Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264
           +   + D             A  +++  D++   + 
Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSDDAQAIAY 369


>gi|315038201|ref|YP_004031769.1| O-linked transferase [Lactobacillus amylovorus GRL 1112]
 gi|325956654|ref|YP_004292066.1| O-linked transferase [Lactobacillus acidophilus 30SC]
 gi|312276334|gb|ADQ58974.1| putative O-linked transferase [Lactobacillus amylovorus GRL 1112]
 gi|325333219|gb|ADZ07127.1| O-linked transferase [Lactobacillus acidophilus 30SC]
 gi|327183478|gb|AEA31925.1| O-linked transferase [Lactobacillus amylovorus GRL 1118]
          Length = 415

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 101/263 (38%), Gaps = 30/263 (11%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172
           F  E L  +   +I L +   +     L  +    +     + SL  ++      G + +
Sbjct: 62  FPKEDLFKVYLAEILLNDGDEDDGLSLLYSVSHDSS---AYLDSLLVQADYYQTSGLIET 118

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229
           A+    +AL I+P+   V   + +   L+ ++ +A+     L Q+++   E N N+ +  
Sbjct: 119 AKDKLLQALKIAPEEDAVKFGLAELDYLSGDYEQALALYKDLVQRQETFGEVNLNQRLFA 178

Query: 230 IARSLENADKGDMI-ASYHDAIESL--KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               + N ++   I     D+I  +  K     +M S+             KA   L+++
Sbjct: 179 TNAKMGNYEQAAEIIRKRSDSIFDIDSKYEAGLVMLSV---------GDDDKAIKFLDEV 229

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGS 340
            + +P     +P +A  Y H    +    L+ A      N E  E+L  + ++ A  +  
Sbjct: 230 IEQSPDYVNAYPLLAQAYEH--KHDNEQVLRTAQAGLAYN-ELDETLYSLGARAAANLNE 286

Query: 341 IDQAHAKAMLAMKIAPRKEIFLL 363
           +D A       +KIAP      +
Sbjct: 287 MDTARDLLEKGLKIAPDNSDLRM 309



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 76/226 (33%), Gaps = 30/226 (13%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +  I  A+     +        E  V     ++      Y  A    + ++Q   T    
Sbjct: 113 SGLIETAK--DKLLQALKIAPEEDAVKFGLAELDYLSGDYEQALALYKDLVQRQET---- 166

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAP----------WVTEAVVQQYVLAKEWSR 206
            +     + R+   N+      +A +I                    ++       +  +
Sbjct: 167 -FGEVNLNQRLFATNAKMGNYEQAAEIIRKRSDSIFDIDSKYEAGLVMLSV----GDDDK 221

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           AI FL++  + + ++     +L  A      D   ++ +    +   +L +         
Sbjct: 222 AIKFLDEVIEQSPDYVNAYPLLAQAYE-HKHDNEQVLRTAQAGLAYNELDETLYS---LG 277

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307
           A++  + N+   A  +LEK  K+ P       +++N+Y H+  +++
Sbjct: 278 ARAAANLNEMDTARDLLEKGLKIAPDNSDLRMQLSNLYLHMHQDSS 323


>gi|255611944|ref|XP_002539362.1| conserved hypothetical protein [Ricinus communis]
 gi|223506840|gb|EEF23021.1| conserved hypothetical protein [Ricinus communis]
          Length = 327

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 78/214 (36%), Gaps = 18/214 (8%)

Query: 160 LYFESCRIGDLNSAQRYATKAL----------------DISPDAPWVTEAVVQQYVLAKE 203
           +   + +  D   A+R A  AL                 ++PD+    +  +   V A +
Sbjct: 71  MMALAQQTRDPRLARRAAEMALTAKQTAEAVSAIRLWRSLAPDSDEAMQFFLGFAVTADD 130

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            S A      + K AK     R +++           D  A++      L   D+++ A 
Sbjct: 131 LSEAEAVFEARLKKAKPA--ARPLMMFQMQQYLLRAKDKAAAFSLMERVLLPYDDTLEAH 188

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
           +  +++    N   +A     +   + P  E+A + T  +S +    +K      +   +
Sbjct: 189 LILSQAAAGNNDPERARAEAARALAIKPDSELAILSTAQVSGDIDAAIKVLTGFLDKYPK 248

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + E     ++I ++    D+A  + ++ +K  P 
Sbjct: 249 ANEVRAAYARILVDNKQYDEARKQFLMLLKDQPD 282


>gi|18859261|ref|NP_571705.1| protein-kinase, interferon-inducible double stranded RNA dependent
           inhibitor [Danio rerio]
 gi|11545427|gb|AAG37839.1|AF295376_1 interferon-inducible double stranded RNA dependent protein-kinase
           inhibitor [Danio rerio]
          Length = 502

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 61/179 (34%), Gaps = 19/179 (10%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A + + A++  +       E +    +    R+      G   ++  D  ++++L  + 
Sbjct: 54  AAGQLAEALSHYHSAV----EGDSKSYLTYYKRATVFLAMGKSKSALPDLTQAIQLKPDF 109

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI-YTHLLSENTVGKLKR 313
           + A +     L+ Q   ++A    + +   +P     H ++        L E      +R
Sbjct: 110 LAARLQRGNILLKQGSTQEAREDFQAVLNHSPDHKEAHDQLLKADKLESLQEEVHEAHRR 169

Query: 314 ---------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                       + E++    ES  + ++  +++G   +A      A ++        L
Sbjct: 170 GDCRIAVQVLEHVIELSPWDPESRELRAECYIQLGEPRKAIMDLTPASRLRADNRAAFL 228


>gi|330002534|ref|ZP_08304358.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
 gi|328537296|gb|EGF63553.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 37/192 (19%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +  + ++     R  
Sbjct: 83  GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLG 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + ++Q Y    +W  AI    +  
Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE +R   A      +L+     D+  +     +       S   SI   +  + + 
Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLRKGAAADRTSARVSIMMGRVWMEKG 228

Query: 275 KKRKAEVILEKI 286
              KA   LE++
Sbjct: 229 DYAKAVESLERV 240


>gi|172038545|ref|YP_001805046.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
 gi|171699999|gb|ACB52980.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
          Length = 383

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 83/264 (31%), Gaps = 42/264 (15%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLE--MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
            E L  LL   +  + +  Y  A    E    L     R F+   + +   + G+  +A 
Sbjct: 59  KEQLDELLRRGRDYVDKGDYQRAIATYEQAASLDKDNARIFS--GIAYLHSQQGNYQAAV 116

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           +Y  +AL +         A+        + + A +      +   ++ ++     I   +
Sbjct: 117 KYYQQALSLDSSNANFYYALGDSLANIGDNNNAASAYYYAIQLNPQFVKS----YIGLGV 172

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
               + +   +       + L  N+  A      SL+ Q +  +A   L           
Sbjct: 173 VLLRQENYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYL----------- 221

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                      N V +              V+  ++++   L+ G ++    +   A +I
Sbjct: 222 ----------GNAVERF----------SGDVDLRLLLATAYLQQGQLELGKEQLQRAERI 261

Query: 355 APRKEIFLL-LAQI-EQANSHNTD 376
            P      L +A+I E   + +  
Sbjct: 262 DPSNTKIQLKIARIYEVQENLDEA 285



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 79/274 (28%), Gaps = 23/274 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALAERQYNIAHEKLEMML 147
             +     N   A K +       + +      L   L    A      N A      + 
Sbjct: 103 AYLHSQQGNYQAAVKYYQQALSLDSSNANFYYALGDSL----ANIGDNNNAASAYYYAIQ 158

Query: 148 QIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             P  +   +   L     R  +   A     + + + P+ P     +    +  K+  +
Sbjct: 159 LNP--QFVKSYIGLGVVLLRQENYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQ 216

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+ +L    +        R +L  A       +G +         + ++  ++    +  
Sbjct: 217 ALQYLGNAVERFSGDVDLRLLLATAY----LQQGQLELGKEQLQRAERIDPSNTKIQLKI 272

Query: 267 AKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEI 320
           A+    Q    +A  I  +  +     PE    Y       L  ++ +G +     L EI
Sbjct: 273 ARIYEVQENLDEALKIYRRISYLNRKSPE---AYAGVGRIQLAQKDYLGAIITYKDLIEI 329

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++ E    +     E     +A      A K+
Sbjct: 330 IPQNPEPYYYLGVAFKERQRNSEAKKALQYAKKL 363



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 64/195 (32%), Gaps = 11/195 (5%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           YV   ++ RAI    Q     K+  R    +    +  ++ +G+  A+     ++L L  
Sbjct: 72  YVDKGDYQRAIATYEQAASLDKDNAR----IFSGIAYLHSQQGNYQAAVKYYQQALSLDS 127

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLK 312
           ++         SL +      A        ++N  P+    Y  L       EN  G  +
Sbjct: 128 SNANFYYALGDSLANIGDNNNAASAYYYAIQLN--PQFVKSYIGLGVVLLRQENYEGAAE 185

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              R+  ++  + E+  I+    L+   +DQA      A++         LL        
Sbjct: 186 AYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVERFSGDVDLRLLLATAYLQQ 245

Query: 373 HNTDKILYWTQSALH 387
              +      Q A  
Sbjct: 246 GQLELGKEQLQRAER 260


>gi|183221520|ref|YP_001839516.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
           (TPR) domains [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 700

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y+ A      ++++      A Y+L     +      A +Y  KALD + + P V   +
Sbjct: 301 DYDRAEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYI 360

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              ++   + + AIT L +          +    L A +     KG+++ +       ++
Sbjct: 361 ADAFLSMGQTNMAITALKKALLLKP----SDVDSLFALAELYYKKGELVEAESLFRRIIR 416

Query: 255 LCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
           L         A +     L    +  ++    E    +NP     +  +   Y H     
Sbjct: 417 LTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHA--GK 474

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LA 365
               ++   + + ++   V S + ++   LE    ++A ++   A+   P      L LA
Sbjct: 475 PTMAIESLRKSQALDPNHVPSRLAIADYYLENRFYNEAISEYEEAIAWKPELYEARLKLA 534

Query: 366 QI 367
            +
Sbjct: 535 DV 536



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 55/306 (17%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A     AR+            N+Y V LL+  +         A E  +    +  +    
Sbjct: 194 AGKFEEARRAAQRAK--EIAPNDYRVALLQGNLFQEIGDPQSAIEAYKEGQSLAPSDVTL 251

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ------YVLAKEWSRA--- 207
            Y+L     + G+L  A     K +  +P+      AV+        +   +++ RA   
Sbjct: 252 TYNLAISYLKQGNLAEAISEFQKVVQTAPN---SQTAVLSYGHLGTIFYQREDYDRAEYY 308

Query: 208 -ITFLNQKKKNAKEWNR-----------NRAILLIARSLEN---------------ADKG 240
               +  K  +AK +               A     ++L+                   G
Sbjct: 309 FREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYIADAFLSMG 368

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +     ++L L  + + +    A+    + +  +AE +  +I ++ P     + Y+
Sbjct: 369 QTNMAITALKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTP----GDTYS 424

Query: 301 HL----------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                         E     +        +N ++  +   +    L  G    A      
Sbjct: 425 ETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRK 484

Query: 351 AMKIAP 356
           +  + P
Sbjct: 485 SQALDP 490



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 71/226 (31%), Gaps = 12/226 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A +  +  L   A        +      +G  N A     KAL + P       A+ +
Sbjct: 337 EEAAKYFQKALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALAE 396

Query: 197 QYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            Y    E   A +   +  +      ++    + L     E     + IA++  A+    
Sbjct: 397 LYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALS--- 453

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H-P---EIANIYTHLLSENTVG 309
           L   +  A      S +   K   A   L K   ++P H P    IA+ Y      N   
Sbjct: 454 LNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLAIADYYLENRFYNEA- 512

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +           E  E+ + ++ + ++  +   A    +  ++ A
Sbjct: 513 -ISEYEEAIAWKPELYEARLKLADVYIQTKNYQAAEKMLVYVLENA 557


>gi|71748398|ref|XP_823254.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70832922|gb|EAN78426.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|261333167|emb|CBH16162.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 557

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 85/263 (32%), Gaps = 13/263 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDIS 184
                 +     A ++   + QI   R     +        +  D  +    +   ++  
Sbjct: 271 AMAYFHDGDVENAVKEFARLRQIAPWRLADPLLVHYSTALWQRKDTGALGSLSQTLINEM 330

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P +P         Y L KE   A+  L++  +   E+    A     R  E         
Sbjct: 331 PVSPVTLCVAANAYSLLKESKEALCMLDRAVQLDSEF----AYAHTLRGYELLHLDRKHD 386

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-- 302
           +Y     ++ +  N   A     +         +A+   ++  ++NP P I N Y     
Sbjct: 387 AYESFQNAVLIDSNHYNAYAGLGELYFRSENIPQAQYYFKQAIQINPLPSIMNRYAATYH 446

Query: 303 LSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             + +   L  ALR+     + +  ++ +    +++ + +    +A    +   K  P +
Sbjct: 447 RRDTSKENLSEALRIYDSAIKRHPTNLGARHQRAEVLIRLRRYPEAREALLEMTKACPDE 506

Query: 359 EI-FLLLAQIEQANSHNTDKILY 380
            + ++ LA+           + Y
Sbjct: 507 AMLYVTLAKCVHFMGMPGKAVQY 529


>gi|298713360|emb|CBJ33577.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 700

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 52/134 (38%), Gaps = 7/134 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+A +    ++     +     ++L    ++  A +   +   +  K  +AE +     +
Sbjct: 36  LVAAAAGLFERRKFDEAESVLRQALSESPSNPPALVLLGRVRATTGKLDEAERLYRVALE 95

Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            +P     H  +A ++     +      +   R  E + ++ E+ + + ++++  G+ + 
Sbjct: 96  ASPRNAPAHHALAKVFA--FQQRWAEAKESFERSLEADADNAEAWLGLGRVSMATGNEEA 153

Query: 344 AHAKAMLAMKIAPR 357
           A      ++ + P 
Sbjct: 154 AERHYARSLSLDPS 167



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 78/235 (33%), Gaps = 7/235 (2%)

Query: 125 LEVQIALAERQY--NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L    A    +   + A   L   L    +   A+  L       G L+ A+R    AL+
Sbjct: 36  LVAAAAGLFERRKFDEAESVLRQALSESPSNPPALVLLGRVRATTGKLDEAERLYRVALE 95

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            SP       A+ + +   + W+ A     +  +   +     A   +     +   G+ 
Sbjct: 96  ASPRNAPAHHALAKVFAFQQRWAEAKESFERSLEADAD----NAEAWLGLGRVSMATGNE 151

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
            A+      SL L  ++ +           + +   A+    +  ++NP  ++  +    
Sbjct: 152 EAAERHYARSLSLDPSNALLHFDMGVLSCKRGQVIAADEAFARAGELNPKLDLTVVAQMF 211

Query: 303 LSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + + + + +    RL + +       +   ++   +   + A      A+++ P
Sbjct: 212 TAYDMLEQARDTYKRLLQKDPNDAVHQLAYGELCEALNDEEGARDAYDEALRVDP 266



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 8/155 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++++A      A       L +  +     + +   SC+ G + +A     +A +++P 
Sbjct: 142 GRVSMATGNEEAAERHYARSLSLDPSNALLHFDMGVLSCKRGQVIAADEAFARAGELNPK 201

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                 A  Q +       +A     +  +K+  +     A   +  +L      D   +
Sbjct: 202 LDLTVVA--QMFTAYDMLEQARDTYKRLLQKDPNDAVHQLAYGELCEAL-----NDEEGA 254

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                E+L++      A    A  L       +A 
Sbjct: 255 RDAYDEALRVDPGMGKAHFRKALLLTGTGVTNQAA 289


>gi|260768937|ref|ZP_05877871.1| hypothetical protein VFA_001994 [Vibrio furnissii CIP 102972]
 gi|260616967|gb|EEX42152.1| hypothetical protein VFA_001994 [Vibrio furnissii CIP 102972]
          Length = 389

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 99/339 (29%), Gaps = 59/339 (17%)

Query: 98  HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +       + L      +  +     + A    E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIEQKNLALQQLAKDYMVSGFLDRAERIFEQLVDEPEHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +   Y   +EW +AI   +   
Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIDCAHALV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  ++  +   A      +++    G    +     ++L+     + ASI   K  +   
Sbjct: 169 KMGRKRMKASIAHFWCELAMQEKADGHDNKAIQLFKKALQEDPKCVRASISLGKLYLESE 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
             +K    +E +      +     P +A  Y HL  E  + +  R   + +    S E  
Sbjct: 229 DYKKTIQYMEMVLDQDIDFIGEVLPTLAECYHHLGQEQELVQFLR-QCISDKAGVSAE-- 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS-- 384
           ++++++  +   +  A       +   P  + F  L    I +A        L   Q   
Sbjct: 286 LMLAQLVAQHEGVASAQELLTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQKLV 345

Query: 385 --ALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
              L A   P +       S+    W    P  K     
Sbjct: 346 GEQLKAK--PHYRCRRCGFSTHSLYWH--CPSCKGWGSI 380


>gi|254445221|ref|ZP_05058697.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259529|gb|EDY83837.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 501

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 81/243 (33%), Gaps = 19/243 (7%)

Query: 134 RQYNIAHEKLEMMLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             Y  A   L+ M +  P   R +      F     G  + A  +  K +++  D     
Sbjct: 187 GDYKRALSYLDRMQEIDPENARFYRYRGTVF--MEEGQFDQASIHFRKGIELGGDNAESY 244

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +VQ          A     +  ++++          +  +    D+     +     E
Sbjct: 245 PLLVQSLSRGGAPDEAEAVARKGLQDSEPSAVLL----LELARLLVDRKAYADARETLSE 300

Query: 252 SLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           + ++    +   +  A+    L S+ + +++  ++ ++   +P   +     H+ + + V
Sbjct: 301 AHEIQPYDVEVLLLRARVSMWLDSREEAKRSLAMVRQLAPSDPEKLVRAALVHMEAGSFV 360

Query: 309 GKLKRALRLEEINKESVESLVIVSKIA-------LEMGSIDQAHAKAMLAMKIAPRKEIF 361
             L    R  ++     + + ++           L  G  + A A    ++++ P   I 
Sbjct: 361 DALPLLERAVKVKPGYKDGVELLVDAHLQIGGKLLAAGDREAALASFDRSLEVMP-ISIE 419

Query: 362 LLL 364
            L+
Sbjct: 420 TLM 422


>gi|195171564|ref|XP_002026575.1| GL21701 [Drosophila persimilis]
 gi|194111491|gb|EDW33534.1| GL21701 [Drosophila persimilis]
          Length = 915

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 553 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 610

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 611 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 670

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          + +   + LK C  SI   + +A     +
Sbjct: 671 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAANTYTQGLKKCPTSIPLWVLSANLEERK 730

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               KA  ILE+    N  P++A ++   +       LK
Sbjct: 731 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 767



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 262 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEINAQSEDLW- 320

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 321 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 370

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 371 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 423

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 424 RKVLNKARENIPTDRQIWTTAAKLEEANGN 453


>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 1056

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 6/216 (2%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+         A  +  Y           + Y        ++ +Y+ A    +  LQ 
Sbjct: 576 RGLVFQNKGEYDRA--IVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQH 633

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A         R G+ + A     +AL + P +               E+ RAIT
Sbjct: 634 NPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAIT 693

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L+Q  +    +    A     R      KGD+  +  D  E+++L      A      +
Sbjct: 694 DLDQALRLKPGF----ANPHYHRGTAFRHKGDLDRALADLNEAVRLNPKYADAYQERGVT 749

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
             ++ +  +A     +  ++ P  E    +  +  E
Sbjct: 750 FQARGEPDRALADFAEAVRLKPELEADATFLKVRGE 785


>gi|71905787|ref|YP_283374.1| response regulator receiver:tetratricopeptide TPR_4 [Dechloromonas
           aromatica RCB]
 gi|71845408|gb|AAZ44904.1| Response regulator receiver:Tetratricopeptide TPR_4 [Dechloromonas
           aromatica RCB]
          Length = 449

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 32/257 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + ++ LA      + +    +L+    P  R     SL+ ++     L  A+    K +D
Sbjct: 172 QAEVLLASGDAEASEKAYRSILENYEFPWARAGVARSLHKQNR----LTEARAEIDKVVD 227

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241
            +P     ++      +   E + A   L++  KK  + + R R +   A +       +
Sbjct: 228 STPHFFDASDLKASICMAQGEHAEAQKVLDEVAKKTPRNYLRKRML---AEAATLNGDSE 284

Query: 242 MIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVIL-------EKIWKVNPH 292
              +    + +      +I     +  A+S +  N K  AE +L        +   +   
Sbjct: 285 TARATMADVIANDTMPGAISPEDRLTMARSHLDGNDKISAEKVLVGLRDVEIQAMNLAEQ 344

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              A +      E    +          ++    + + V + AL +   + A   A    
Sbjct: 345 ASFAALLAISSPEKGKARFAGLRPALLASELGPTTSLDVMRAALSVSDHELADLHAEQ-- 402

Query: 353 KIAPRKEIFLLLAQIEQ 369
                     L+A IE 
Sbjct: 403 ----------LMAGIEA 409



 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 71/222 (31%), Gaps = 23/222 (10%)

Query: 161 YFESCRIG-DLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           Y E  +       A   A +  +   P    +     +  + + + + A     +     
Sbjct: 137 YQEKRKQEYARALAILEAQRTSETGRPYRFEIQRQQAEVLLASGD-AEASEKAYRSILEN 195

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E+   RA      +     +  +  +  +  + +    +   AS   A   ++Q +  +
Sbjct: 196 YEFPWARA----GVARSLHKQNRLTEARAEIDKVVDSTPHFFDASDLKASICMAQGEHAE 251

Query: 279 AEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEE-INKES--VESLVI 330
           A+ +L+++ K  P        +A     L  ++   +   A  +       +   E  + 
Sbjct: 252 AQKVLDEVAKKTPRNYLRKRMLAEA-ATLNGDSETARATMADVIANDTMPGAISPEDRLT 310

Query: 331 VSKIALEMGSIDQA-------HAKAMLAMKIAPRKEIFLLLA 365
           +++  L+      A           + AM +A +     LLA
Sbjct: 311 MARSHLDGNDKISAEKVLVGLRDVEIQAMNLAEQASFAALLA 352


>gi|328700630|ref|XP_001950113.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Acyrthosiphon pisum]
          Length = 1045

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 35/304 (11%)

Query: 71  MLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVY 123
            L +  H          GY  L   L++  A ++  A + +    Q   +       L  
Sbjct: 110 ALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPELYCVRSDLGN 167

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKA 180
           LL+        + + A       L+   TR     A  +L      + ++  A  +  KA
Sbjct: 168 LLKA-----LGRLDEAKSCY---LKAIETRPDFAVAWSNLGCVFNSLNEIWLAIHHFEKA 219

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P+       +      ++ + R+++   +    +       A++    +    ++G
Sbjct: 220 VALDPNFLDAYINLGNVLKESRIFDRSVSAYLRALALSPT----NAVVHGNLACVYYEQG 275

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
            +  +      +++L  N   A    A +L  + +   AE       K+ P H +  N  
Sbjct: 276 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALKLCPTHADSLNNL 335

Query: 300 THLL------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            ++        E T   LK      E           ++ +  + G + +A      A++
Sbjct: 336 ANIKREQGYIEEATGLYLKALEVFPEFAAAHSN----LASVLQQQGKLTEALNHYQEAIR 391

Query: 354 IAPR 357
           I P 
Sbjct: 392 IQPT 395



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + +       L +  T      +L       G ++ A     +A+++ P+ P     +  
Sbjct: 244 DRSVSAYLRALALSPTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 303

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   K         A  L   +    ++G +  +    +++L++ 
Sbjct: 304 ALKEKGQVVDAEECYNTALKLCPT----HADSLNNLANIKREQGYIEEATGLYLKALEVF 359

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A    ++  ++ P    A+ Y+++ +     ++    L
Sbjct: 360 PEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQPT--FADAYSNMGNTLKEMQDIQNAL 417

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A A    A+++ P 
Sbjct: 418 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALRLKPD 463



 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 309 GQVVDAEECYNTALKLCPTHADSLNNL--ANIKREQGYIEEATGLYLKALEVFPEF-AAA 365

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I P        +       ++   A+   ++  +
Sbjct: 366 HSNLASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQ 425

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +L+L  +   A    A  L
Sbjct: 426 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALRLKPDFPDAYCNLAHCL 475



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%)

Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +    AL + P        +            A     +  +   E+    A      
Sbjct: 314 AEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGLYLKALEVFPEF----AAAHSNL 369

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +     +G +  + +   E++++      A      +L      + A     +  ++NP 
Sbjct: 370 ASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQINPA 429

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               H  +A+I  H  S N    +        +  +  ++   ++
Sbjct: 430 FADAHSNLASI--HKDSGNIPEAIASYRTALRLKPDFPDAYCNLA 472


>gi|322433067|ref|YP_004210316.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9]
 gi|321165294|gb|ADW70998.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 373

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 18/193 (9%)

Query: 135 QYNIAHEKLEM---MLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           +Y+ A         M          A   L     R   L  AQ +A KAL + P  P  
Sbjct: 177 KYDDARHAFAAQFGMEPDGAGAYLLAARML----LRREYLPVAQGFAEKALALQPGLPLA 232

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              + +  +       AI    ++K +          L  A             +     
Sbjct: 233 HALLGEIALAGNHLEEAIAQFEKEKISNPLEPSVYDRLGDAYGR----AARYTDAQASLQ 288

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LS 304
           E++ L  NS    I   K+++ Q     A   LE+  K++P     H  +   Y  +  +
Sbjct: 289 EAVLLEPNSTGPYILLGKTMLKQGDALGATTYLERAVKMDPANYMTHSLLGQAYRTMGRT 348

Query: 305 ENTVGKLKRALRL 317
           E+   +   A +L
Sbjct: 349 EDASRETSTAQKL 361


>gi|320103411|ref|YP_004179002.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319750693|gb|ADV62453.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 315

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 7/229 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +     L+ A +   +    +P +P V       Y  A     A   LNQ       +
Sbjct: 73  QAALETDRLDEAAQILNRLAAQNPHSPMVHYRRGVLYRKAGRPEEARACLNQALAIDPNY 132

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                  L+  ++ +AD G    +   A+ + +L   +  A     + L    +  +A  
Sbjct: 133 GE----ALVELAMLDADLGRTQIALERALTATRLDPTNGKAHAARGRLLADLGRDEEALA 188

Query: 282 ILEKIWKVNP-HPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
              +  +  P  PEI                 L R  ++ E++ +  E+  +   I LE 
Sbjct: 189 AFHRALEWEPDDPEIQWRVAAIQRRRGRLEQSLARLAKVLELDPDHGEAHHLRGVIRLER 248

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           G I +A     LA +  P +        + +  +H  D+       A  
Sbjct: 249 GRIAEAVEDLTLAAQRLPHRPEVHYHLALARQANHQLDQAREAVTQARR 297



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 80/247 (32%), Gaps = 13/247 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q AL   + + A + L  +           Y       + G    A+    +AL I P
Sbjct: 71  AAQAALETDRLDEAAQILNRLAAQNPHSPMVHYRRGVLYRKAGRPEEARACLNQALAIDP 130

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +       +V+  +L  +  R    L +    A   +        AR    AD G    +
Sbjct: 131 NYGEA---LVELAMLDADLGRTQIALERAL-TATRLDPTNGKAHAARGRLLADLGRDEEA 186

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                 +L+   +        A     + +  ++   L K+ +++  P+    + HL   
Sbjct: 187 LAAFHRALEWEPDDPEIQWRVAAIQRRRGRLEQSLARLAKVLELD--PDHGEAH-HLRGV 243

Query: 306 NTVGKLKRALRLEEIN------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             + + + A  +E++           E    ++        +DQA      A ++ P  +
Sbjct: 244 IRLERGRIAEAVEDLTLAAQRLPHRPEVHYHLALARQANHQLDQAREAVTQARRLDPTFQ 303

Query: 360 IFLLLAQ 366
              +L +
Sbjct: 304 AAAILEE 310


>gi|209523077|ref|ZP_03271634.1| sulfotransferase [Arthrospira maxima CS-328]
 gi|209496664|gb|EDZ96962.1| sulfotransferase [Arthrospira maxima CS-328]
          Length = 714

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 14/229 (6%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     KA+ I P+   ++  + + +V  ++W  AI    Q  +   +       +    
Sbjct: 166 AIAIYAKAMAIYPNVAEISYNLGETFVNCEQWESAINAYKQALEIDPDLY----YVYSRL 221

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                ++ +   +     E LKL  +    ++   +    Q   ++A    +K   + P 
Sbjct: 222 GDVFTEQKNYQDAIAAYQECLKLKPDIDWINLKLGEICQKQGDIKQAIAAYQKGITIQPK 281

Query: 293 ---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHA 346
              P +  +      E+          L   + +  +S +I   +++ A+     +QA  
Sbjct: 282 LTWPYLKLLELLNHLESWQEIFSNYKELLNNHPD--KSAIIHQKLAEAAVRFKKWNQAIK 339

Query: 347 KAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
               A++I P   +  L LAQI          I  +   A++  P   W
Sbjct: 340 NFQKALEIDPECFDACLQLAQIFLRQGKPIKAIEAYI-KAVNIRPHFYW 387



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 5/161 (3%)

Query: 133 ERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           ++ Y  A    +  +   P      +  L     + GD+  A     K + I P   W  
Sbjct: 228 QKNYQDAIAAYQECLKLKPDIDWINLK-LGEICQKQGDIKQAIAAYQKGITIQPKLTWPY 286

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +++     + W    +   +   N  +     AI+    +           +  +  +
Sbjct: 287 LKLLELLNHLESWQEIFSNYKELLNNHPD---KSAIIHQKLAEAAVRFKKWNQAIKNFQK 343

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +L++      A +  A+  + Q K  KA     K   + PH
Sbjct: 344 ALEIDPECFDACLQLAQIFLRQGKPIKAIEAYIKAVNIRPH 384



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 6/127 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G+ + A+    KAL+I P+   V   +   +    +W  AI    +  +   ++     
Sbjct: 56  QGEFDQAEASYKKALEIEPNFAEVYANLGSLFAQKNDWQSAINCYEKAIEIKPDFGGVYR 115

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSI--MASICAAKSLISQNKKRKAEVILE 284
            L    +           + +  ++++ +   ++     +  AK+L +Q K  +A  I  
Sbjct: 116 NL----AKVFGQINQQDKANYCWLKAINIEPQNVNLPEYLEVAKALDNQGKFPQAIAIYA 171

Query: 285 KIWKVNP 291
           K   + P
Sbjct: 172 KAMAIYP 178


>gi|268317307|ref|YP_003291026.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334841|gb|ACY48638.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 906

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFL 362
             NT   L    ++  +  ++ E  + ++++ +  G +D+A      A +  P   +   
Sbjct: 700 EGNTRRALDAFEQVSRLAPDNPEGPINLARVLIAEGQLDRAMEALAEAERRRPGYLKTAY 759

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402
              +I Q        +  W +       D + + + G + 
Sbjct: 760 FRGKIYQRQGEYDRALDEWMKVVARYPRDRVLLQEIGRIH 799


>gi|149924835|ref|ZP_01913174.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149814295|gb|EDM73898.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 2568

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 77/260 (29%), Gaps = 30/260 (11%)

Query: 113  QHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
             H    + L  +LEVQ A  L       A        Q+  +R              GD 
Sbjct: 1115 DHRGRYDELAEVLEVQAAKVLDAGDTEAASGLFLRTAQLAESRL-------------GDK 1161

Query: 171  NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
              A R   + ++++P      +A+ + Y        A T+L ++ ++  +  R   +L +
Sbjct: 1162 EQATRAYLRVVELAPSNA-ALDALARLYASQDRPDTAATYLERRLEDTPDSERVAILLKL 1220

Query: 231  ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            AR+   A+      +      +      +        +    ++        L       
Sbjct: 1221 ARARIAAE--QREKAVQALETAFAEAPRNGEVRKLLIRLHRERDDIASLARTLATAAGAV 1278

Query: 291  PHPEIANIYTH---------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
              P     Y              E  V  L+RA        +  +  ++++      G +
Sbjct: 1279 GDPNTVVAYAREAAELYDTLGTPEAAVPVLERAHEFA---PDDRDLRLMLADGLRGAGRL 1335

Query: 342  DQAHAKAMLAMKIAPRKEIF 361
            D+A       +    R+   
Sbjct: 1336 DEARELLEALIASFGRRRSA 1355



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 63/223 (28%), Gaps = 9/223 (4%)

Query: 70   AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
              L     +R   K        L  +A+    +   +            + L+     Q 
Sbjct: 1343 EALIASFGRRRSAKRAVVHSR-LARVASAQGKVEEAIDQLERASKMAAGDVLILRDLAQT 1401

Query: 130  ALAERQYNIAHEKLEMML--------QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            A +  Q++ A      +L          P        +L   +   G  + A       L
Sbjct: 1402 AQSAGQHDRAERAYRTLLLSLRRAGKDAPIGAGEVYLALAAIADERGQADKAAELRESVL 1461

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            +   +       +       ++++     L  ++   K   R   +L     +   D GD
Sbjct: 1462 EAVTEDDSQAPRIQAALREREDFAFLRRVLEARRDGVKSARRKAKVLAALGDVLENDLGD 1521

Query: 242  MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              A+    +++++   +S           +   +  +   +LE
Sbjct: 1522 KDAALEARLQAVEADPSSPPLHDAVQPLAVELGRTERYAKLLE 1564



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 35/216 (16%)

Query: 181  LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENA 237
            L+  P  P    A+ +       +      L     K  +A +      + L    L  +
Sbjct: 1097 LEERPGHPESIAALSELLDHRGRYDELAEVLEVQAAKVLDAGDTEAASGLFLRTAQLAES 1156

Query: 238  DKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              GD   +    +  ++L  ++  A++ A A+   SQ++                 P+ A
Sbjct: 1157 RLGDKEQATRAYLRVVELAPSN--AALDALARLYASQDR-----------------PDTA 1197

Query: 297  NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              Y     E+T    +R   L           + +++  +     ++A      A   AP
Sbjct: 1198 ATYLERRLEDTPD-SERVAIL-----------LKLARARIAAEQREKAVQALETAFAEAP 1245

Query: 357  RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
            R      L         +   +     +A  A+ DP
Sbjct: 1246 RNGEVRKLLIRLHRERDDIASLARTLATAAGAVGDP 1281



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 44/332 (13%)

Query: 99   NIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +      +      +      E  V  LE   A A R   +    + +  +       A 
Sbjct: 1210 DSERVAILLKLARARIAAEQREKAVQALETAFAEAPRNGEVRKLLIRLHRERDDIASLA- 1268

Query: 158  YSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQ------------------ 197
             +L   +  +GD N+   YA +A ++      P     V+++                  
Sbjct: 1269 RTLATAAGAVGDPNTVVAYAREAAELYDTLGTPEAAVPVLERAHEFAPDDRDLRLMLADG 1328

Query: 198  YVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
               A     A   L     +  +  +  RA++    +   + +G +  +      + K+ 
Sbjct: 1329 LRGAGRLDEARELLEALIASFGRRRSAKRAVVHSRLARVASAQGKVEEAIDQLERASKMA 1388

Query: 257  DNSIMASICAAKSLISQNKKRKAEVI-------LEKIWKVNP------HPEIANIYTHLL 303
               ++     A++  S  +  +AE         L +  K  P      +  +A I     
Sbjct: 1389 AGDVLILRDLAQTAQSAGQHDRAERAYRTLLLSLRRAGKDAPIGAGEVYLALAAIADERG 1448

Query: 304  SENTVGKLKRALRLEEINKESVESLVIVSKIAL-EMGSIDQAHAKAMLAMKIAPRKE--- 359
              +   +L R   LE + ++   S     + AL E                         
Sbjct: 1449 QADKAAEL-RESVLEAVTEDD--SQAPRIQAALREREDFAFLRRVLEARRDGVKSARRKA 1505

Query: 360  -IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             +   L  + + +  + D  L     A+ A P
Sbjct: 1506 KVLAALGDVLENDLGDKDAALEARLQAVEADP 1537


>gi|109089878|ref|XP_001086302.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 2 [Macaca mulatta]
          Length = 472

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 68/220 (30%), Gaps = 37/220 (16%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVQEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLE--EINKESVESLVIVSKIALEMG 339
            +  P     H +I   Y             RA  L+   + +  +     + ++     
Sbjct: 274 LEYLPNNAYLHCQIGCCY-------------RAKVLQVMNLRENGIYGKRKLLEL----- 315

Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
            I  A A    A +       +  +LA +       E+A 
Sbjct: 316 -IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354


>gi|319443727|pdb|3PE3|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
           With A Peptide Substrate
 gi|319443728|pdb|3PE3|B Chain B, Structure Of Human O-Glcnac Transferase And Its Complex
           With A Peptide Substrate
 gi|319443729|pdb|3PE3|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
           With A Peptide Substrate
 gi|319443730|pdb|3PE3|D Chain D, Structure Of Human O-Glcnac Transferase And Its Complex
           With A Peptide Substrate
 gi|319443731|pdb|3PE4|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
           With A Peptide Substrate
 gi|319443733|pdb|3PE4|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
           With A Peptide Substrate
          Length = 723

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 6/154 (3%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           H + L  L    I   +     A       L++      A  +L     + G L  A  +
Sbjct: 8   HADSLNNL--ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 65

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A+ ISP        +       ++   A+    +  +    +    A      +  +
Sbjct: 66  YKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF----ADAHSNLASIH 121

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            D G++  +      +LKL  +   A    A  L
Sbjct: 122 KDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 155



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 45/153 (29%), Gaps = 11/153 (7%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P        +            A+    +  +   E+    A      +     +G +  
Sbjct: 6   PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF----AAAHSNLASVLQQQGKLQE 61

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299
           +     E++++      A      +L      + A     +  ++NP     H  +A+I 
Sbjct: 62  ALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI- 120

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            H  S N    +       ++  +  ++   ++
Sbjct: 121 -HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 152



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 59/125 (47%), Gaps = 7/125 (5%)

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G++  +     ++L++      A    A  L  Q K ++A +  ++  +++P    A+
Sbjct: 21  EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FAD 78

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 79  AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 138

Query: 353 KIAPR 357
           K+ P 
Sbjct: 139 KLKPD 143


>gi|322420317|ref|YP_004199540.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320126704|gb|ADW14264.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 406

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 76/216 (35%), Gaps = 13/216 (6%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPW 189
               + + A    E  +++  T      + +  +  R   ++ A  +   AL++ P+AP 
Sbjct: 197 QDLGRNDEAITYYEKAVKLVPTH-VGCQNNFGAALLRANRIDEALEHCNTALELDPNAPL 255

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           V   +   ++L ++++ A            +       L  A   E A  GD+       
Sbjct: 256 VKINLGYIHLLKQDYTAARNNFRDALALNDKLAPAYYGLASA---EQALGGDVKRIQELY 312

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKR----KAEVILEKIWKVNPHPEIANIYTHL-LS 304
            ++++   +   A    A  L SQN ++     A  +       N   +       L   
Sbjct: 313 EKAVETNPSIAEAHYALANILASQNDQQALSHYATALQLNSSLPNLRRDFGYTCLQLGRR 372

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           E  + +LK A+ L   N +   +  ++++     G 
Sbjct: 373 EEALEQLKLAVML---NPDDPVARDLLAQAQGASGE 405



 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 14/238 (5%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           Y+ A   L+  L+       A+Y+       +G  + A  Y  KA+ + P          
Sbjct: 168 YDYAESVLQEALKHAPYHFGALYTYAVLLQDLGRNDEAITYYEKAVKLVPTHVGCQNNFG 227

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              + A     A+   N   +          ++ I     +  K D  A+ ++  ++L L
Sbjct: 228 AALLRANRIDEALEHCNTALELDPNAP----LVKINLGYIHLLKQDYTAARNNFRDALAL 283

Query: 256 CDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVG 309
            D    A    A +  +     ++ + + EK  + NP     H  +ANI   L S+N   
Sbjct: 284 NDKLAPAYYGLASAEQALGGDVKRIQELYEKAVETNPSIAEAHYALANI---LASQNDQQ 340

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQ 366
            L       ++N              L++G  ++A  +  LA+ + P   +   LLAQ
Sbjct: 341 ALSHYATALQLNSSLPNLRRDFGYTCLQLGRREEALEQLKLAVMLNPDDPVARDLLAQ 398



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 14/171 (8%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GD 169
           +      N  LV +    I L ++ Y  A       L +      A Y L      + GD
Sbjct: 245 TALELDPNAPLVKINLGYIHLLKQDYTAARNNFRDALALNDKLAPAYYGLASAEQALGGD 304

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           +   Q    KA++ +P       A+        +  +A++      +        R    
Sbjct: 305 VKRIQELYEKAVETNPSIAEAHYALANILASQND-QQALSHYATALQLNSSLPNLR---- 359

Query: 230 IARSLENADKGDMIASYHDAIESLKLC----DNSIMASICAAKSLISQNKK 276
                +       +    +A+E LKL      +  +A    A++  +  + 
Sbjct: 360 ----RDFGYTCLQLGRREEALEQLKLAVMLNPDDPVARDLLAQAQGASGEA 406


>gi|164658385|ref|XP_001730318.1| hypothetical protein MGL_2700 [Malassezia globosa CBS 7966]
 gi|159104213|gb|EDP43104.1| hypothetical protein MGL_2700 [Malassezia globosa CBS 7966]
          Length = 917

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 87/277 (31%), Gaps = 26/277 (9%)

Query: 124 LLEVQIALAERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           LL           + A        +  L   +    A          +GD+++A +   +
Sbjct: 585 LLYADDRRRAGDVSGARTILARAFDANLGSESISLAA----ATLESDLGDMHAAAKLLMR 640

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A +       V    VQ       +  A+T      +           +   ++     K
Sbjct: 641 AREEVRTER-VWITSVQVAWRQGAYDDALTLAKNALERFPALE----AVYTMQARLYETK 695

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           GD+ A+        + C  SIM  + +++         +A  +LEK  + +P  +     
Sbjct: 696 GDLGAAREALAAGRRACPTSIMLWLLSSRLEERTGALIRARALLEKGRQAHPTSD----- 750

Query: 300 THLLSENTVGKLKR-----ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             L +E+   +L+      A  L     ++  S   +   A+ +       ++A  A++ 
Sbjct: 751 -ELWAESAAVELRANSAAQAKTLLSRGLQACPSSGRLLSAAIWLEPRPARKSRAADALRR 809

Query: 355 APRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           +     +   +A++         +   W    + A  
Sbjct: 810 SADSPYVICTVARLFWDEGR-YTQARDWFTKTVQAAR 845


>gi|195127943|ref|XP_002008426.1| GI13491 [Drosophila mojavensis]
 gi|193920035|gb|EDW18902.1| GI13491 [Drosophila mojavensis]
          Length = 899

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 537 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 594

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 595 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALERLDEALR 654

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          +      +LK C  SI   I +A     +
Sbjct: 655 LLAEAVEVFPDFPKLWMMKGQIEEQQQRTDDAAATYTLALKKCPTSIPLWILSANLEERK 714

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               KA  ILE+    N  P++A ++   +       LK
Sbjct: 715 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 751


>gi|32471678|ref|NP_864671.1| DNA-directed RNA polymerase alpha chain [Rhodopirellula baltica SH
           1]
 gi|32397049|emb|CAD72353.1| probable DNA-directed RNA polymerase alpha chain [Rhodopirellula
           baltica SH 1]
 gi|327539093|gb|EGF25725.1| RNA polymerase alpha subunit domain protein [Rhodopirellula baltica
           WH47]
          Length = 500

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 40/134 (29%), Gaps = 5/134 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A    +   A    +  +        A++ L  E+ R+G+ + A R   +A    P
Sbjct: 220 AATAAQIGGRMEEAINLYQRAVSTDENHAGALFGLALENDRLGNDDEALRLYERAAKAFP 279

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   +   Y    ++ +A     +      +  R +  +  A +  N    +    
Sbjct: 280 TGIGALINLGVMYEDNGQYDKAQLCYKRILDCHPDHPRTQLYMKDASATGNMLYDEEAQR 339

Query: 246 YHDAIESLKLCDNS 259
            +D     +L    
Sbjct: 340 RND-----RLAQTL 348


>gi|332859018|ref|XP_514793.3| PREDICTED: pre-mRNA-processing factor 6 isoform 4 [Pan troglodytes]
          Length = 899

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 286 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 342

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 343 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 394

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 395 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 447

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 448 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 493



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 577 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 634

Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           +   S    WV + +            A     +  ++ +++ +    L + +      K
Sbjct: 635 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 680

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
             M  +     + LK C +S    +  ++      +  +A  ILEK    NP +P +   
Sbjct: 681 EMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 740

Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356
              L     +  +  A  L     +E   S ++ S+ A+ + +  Q   K++ A+K    
Sbjct: 741 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 797

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              + L +A++  +      K   W    +    D
Sbjct: 798 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 831


>gi|313675474|ref|YP_004053470.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312942172|gb|ADR21362.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
            tractuosa DSM 4126]
          Length = 1579

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 85/283 (30%), Gaps = 40/283 (14%)

Query: 129  IALAERQYNIAHEKLEMMLQIP-------ATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
                      A E  +  +            R  A Y L   +  I D+   +    +A 
Sbjct: 1307 AKQLNGNLEQAIEDYDQAIATDGEYARAYENRASARYELENYAGVIEDVEKLEDL-EEA- 1364

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
               P+         + Y   ++W  AI++  +  +        +A     R     +  D
Sbjct: 1365 --GPN---AFYIKAESYYAVEDWVGAISYFERSIQ----GEVVKADSYFKRGRSYLEVED 1415

Query: 242  MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299
              A+  D   + +   ++    +  A+  +     R A     K   +   PE  + Y  
Sbjct: 1416 YQAALDDFNRAAEADPSNASIYLYRAQCYLYLGDVRYAAEDYSKAITLE--PENTDAYYN 1473

Query: 300  ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA- 355
                   +EN  G L+   ++ ++N E   +      +   + +   A      A+++  
Sbjct: 1474 RAILREETENWEGALQDYDKVVQLNPEDASAYYYRGNVKAVLENYQPALKDLNKAIELNS 1533

Query: 356  PRKEIFLLLAQI--------------EQANSHNTDKILYWTQS 384
                 + L   I              E+A +   D + Y+ + 
Sbjct: 1534 EDASYYKLRGNIHYQLEDDLKACEDWERAKNMGDDSVNYYLRQ 1576


>gi|288939973|ref|YP_003442213.1| family 2 glycosyl transferase [Allochromatium vinosum DSM 180]
 gi|288895345|gb|ADC61181.1| glycosyl transferase family 2 [Allochromatium vinosum DSM 180]
          Length = 981

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 14/108 (12%)

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             W       +   Y  +       ++ KR  ++ +     +   ++    A+ +G   Q
Sbjct: 171 AAWS------LGRWYAWMDQWPEAARVMKRFSQIADPVPGHLAPHLLDIDAAMRVGEFGQ 224

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQ----IEQANSHNTDKILY---WTQS 384
           AH +    ++  P      LLA      E  +  +   I     W   
Sbjct: 225 AHDRLKPLLERRPDHADLCLLAANLIQAEAQDDRDDTAIRQRLAWINR 272


>gi|212638951|ref|YP_002315471.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1]
 gi|212560431|gb|ACJ33486.1| TPR repeat protein [Anoxybacillus flavithermus WK1]
          Length = 427

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 67/196 (34%), Gaps = 25/196 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--------REFAVY 158
              +       NE LV     ++     QY  +    E ++    T        R    Y
Sbjct: 131 QKLLKAYEKMPNEPLVQFALAELYFTNGQYQKSLLYYEQIITKTKTIAGTVIAQRIAEAY 190

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           SL       G+   A  Y  +AL+   DA      + Q    A + + A      K    
Sbjct: 191 SLL------GEFEQALSYYEQALNERFDA----HTLFQYGFTAYQ-AEAYKTAIAKLSEL 239

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC---DNSIMASICAAKSLISQNK 275
           K  +R    L +  +     +GD+  SY  A E L +       +   + A K  +   K
Sbjct: 240 KALDREYVPLYLFLAKSYEQEGDIQQSYEIAKEGLTIDEWNKQLL---VYAGKIALKIGK 296

Query: 276 KRKAEVILEKIWKVNP 291
           + +A + +EK   ++P
Sbjct: 297 REEALMYIEKALDIDP 312


>gi|119595582|gb|EAW75176.1| chromosome 20 open reading frame 14, isoform CRA_c [Homo sapiens]
          Length = 901

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           +   S    WV + +            A     +  ++ +++ +    L + +      K
Sbjct: 637 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 682

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
             M  +     + LK C +S    +  ++      +  +A  ILEK    NP +P +   
Sbjct: 683 EMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 742

Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356
              L     +  +  A  L     +E   S ++ S+ A+ + +  Q   K++ A+K    
Sbjct: 743 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 799

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              + L +A++  +      K   W    +    D
Sbjct: 800 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 833


>gi|23014824|ref|ZP_00054622.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 569

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 74/251 (29%), Gaps = 7/251 (2%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 +  L  LL     +A+ +   A+     M +      FA   L      +   +
Sbjct: 297 ALSLRPDFPLAQLLLADAMMAQGRLEDANTLYRSMNRASQPGAFARLKLAVNLDELKQTD 356

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLI 230
           +A           PD+P     +       K +S A                 R   L  
Sbjct: 357 AAIAELKSLAAEWPDSPEAMMTLGDILRRHKRYSEAADAYGTALARNNGAKEPRNWALYY 416

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKV 289
           AR +          +  D +E+L+L  +          + + Q     K   ++E+  ++
Sbjct: 417 ARGIAYERAKQWSKAEPDMLEALRLSPDQPDVLNYLGYTWVDQGINVEKGRKLIERAVEL 476

Query: 290 NPHPEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            P+ + A +    +           +K   R  E+  E       +      +G   +A 
Sbjct: 477 RPN-DGAIVDSLGWALYRMGEFQAAVKYLERASELKPEDATVNEHLGDAFWRVGRETEAR 535

Query: 346 AKAMLAMKIAP 356
            +   AM + P
Sbjct: 536 YQWKRAMGLDP 546


>gi|330507412|ref|YP_004383840.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328928220|gb|AEB68022.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 1286

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 14/147 (9%)

Query: 127 VQIALAERQYNIAHEKLEMM------LQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
             + L   +   A E  +        L        ++Y L       GDL  A     K 
Sbjct: 598 AGVYLQSGEEERAEELYQQSIDGFRELGDARGEARSLYGLARSMAERGDLEGALECYRKC 657

Query: 181 LDI------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           LD+      S       E++V   +    W  A+T   Q  +  +  +   A+  +  +L
Sbjct: 658 LDLQIVGGDSRSMIEALESMVNLLLRRGRWQEALTRYAQVLEALRSRDDLSAVAAVQCAL 717

Query: 235 E--NADKGDMIASYHDAIESLKLCDNS 259
              +AD G    +  D  ESL + +  
Sbjct: 718 GNLHADLGQWDEALEDYNESLAIMEGL 744


>gi|319942688|ref|ZP_08016995.1| hypothetical protein HMPREF9464_02214 [Sutterella wadsworthensis
           3_1_45B]
 gi|319803771|gb|EFW00706.1| hypothetical protein HMPREF9464_02214 [Sutterella wadsworthensis
           3_1_45B]
          Length = 419

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 89/291 (30%), Gaps = 49/291 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREF 155
                A ++H ++  +    +E     L+   Q  LA   ++ A      +  +P+   +
Sbjct: 117 GEFERAVRLHRHLYNRADLSDEERALALKELAQDFLAAGFFDRAEAAYRKLSSVPSEHLY 176

Query: 156 AVYSLY----FESCRIGDLNSAQRYATKALDISPDAPWVTEA---VVQQYVLAKEWSRAI 208
           A+  L      E        +A+   T+A +    +  +       + Q + AK    A 
Sbjct: 177 ALRQLLSIYVIEHEWAAATETARLLETQAGETH--SLEIAHFYCERIDQALRAKRSEDAR 234

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-A 267
             + Q  K A    R +  +    +      G    +       ++   +     I   A
Sbjct: 235 LLVEQLMKYADATPRAQMTI----AKVAEAAGATTEAVRWWRRVIEKNPDYAPLVIGKLA 290

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
            ++  Q  +  A  +L                      +T  +L  A  +E         
Sbjct: 291 DAMNEQGDRAGALKLLL---------------------DTTERLSTADVMEA-------- 321

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
              +S+IA     I  A   A   ++  P    +  L QI +   +  D +
Sbjct: 322 --TLSRIA-AWQGIGAAETLAQSLLEKHPTLSAYNALLQI-RLKGNPDDPM 368


>gi|183221154|ref|YP_001839150.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911245|ref|YP_001962800.1| serine phosphatase RsbU [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775921|gb|ABZ94222.1| Serine phosphatase RsbU, regulator of sigma subunit [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779576|gb|ABZ97874.1| Hypothetical protein with TRP repeats [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 606

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 3/132 (2%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +S     +  A   A KA  I      +   + + Y    ++  AI +L +  + + 
Sbjct: 458 LAKQSNSKMKMEEAYAQALKAFSIDSSLKEILVFLGKMYYRDGKYKEAIRYLEEYLRTSG 517

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +   N A             G +  +      +L    +   ASI  A+  + +N K KA
Sbjct: 518 D---NTAASHFTMGRAYYKAGMISEAKRALKMALSSDHSFAKASILLAQCYLKENAKPKA 574

Query: 280 EVILEKIWKVNP 291
             +L++  K  P
Sbjct: 575 IKVLQQGVKNTP 586


>gi|154300308|ref|XP_001550570.1| hypothetical protein BC1G_11343 [Botryotinia fuckeliana B05.10]
 gi|150856666|gb|EDN31858.1| hypothetical protein BC1G_11343 [Botryotinia fuckeliana B05.10]
          Length = 530

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 59/191 (30%), Gaps = 9/191 (4%)

Query: 108 SYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFES 164
           S +S      +  +  LL      LA+ + N A    ++ +    +   +          
Sbjct: 24  SALSANDIPSDTPISSLLASANAHLAKGETNDALTYYDIAIARDPSNYLSHFRRG--AAY 81

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-ITFLNQKKKNAKE--- 220
             +G +  A +   K L I P          +      +W  A   +L+    +  E   
Sbjct: 82  LSLGRMAQAAQDFDKVLTIKPGHEPALSQRAKIRAKNGDWENAKQDYLSLGASHGAEEEL 141

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            N   A    + +++     +       A  ++ +    +      A     + + ++  
Sbjct: 142 ANLVEAQGAASLAMDAEKDQNWEECVTQAGAAIMVASKVVSLRKTRAHCRFERGEVQEGM 201

Query: 281 VILEKIWKVNP 291
             L+ + ++ P
Sbjct: 202 SDLKHVLQMQP 212


>gi|332262341|ref|XP_003280219.1| PREDICTED: pre-mRNA-processing factor 6 isoform 2 [Nomascus
           leucogenys]
          Length = 901

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495



 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           +   S    WV + +            A     +  ++ +++ +    L + +      K
Sbjct: 637 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 682

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
             M  +     + LK C +S    +  ++      +  +A  ILEK    NP +P +   
Sbjct: 683 EMMERAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 742

Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356
              L     +  +  A  L     +E   S ++ S+ A+ + +  Q   K++ A+K    
Sbjct: 743 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 799

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              + L +A++  +      K   W    +    D
Sbjct: 800 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 833


>gi|322706857|gb|EFY98436.1| mitochondrial outer membrane 72K protein [Metarhizium anisopliae
           ARSEF 23]
          Length = 622

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 5/197 (2%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +S+       A     +        ++  VY    Q +  +     A +  +  + +   
Sbjct: 378 ISLELGEPDKAD--AEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKD 435

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             F+   L     ++G + S+     + +   P  P V     +  +    +S A+   +
Sbjct: 436 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQSNFSEAVEKFD 495

Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  K+        + LI ++L     K D   +     ++L +     +A    A+ 
Sbjct: 496 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEQLCQKALIIDPECDIAVATMAQL 555

Query: 270 LISQNKKRKAEVILEKI 286
           L+ QNK  +A    E+ 
Sbjct: 556 LLQQNKVTEALKYFERA 572


>gi|170034036|ref|XP_001844881.1| Oseg1 [Culex quinquefasciatus]
 gi|167875289|gb|EDS38672.1| Oseg1 [Culex quinquefasciatus]
          Length = 1166

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 73/245 (29%), Gaps = 45/245 (18%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q AL    Y+IA E    +  +P      + +   E  + GD +     A         
Sbjct: 602 AQAALEALNYHIAREAYVKVRNLP---WLELINDLKERQKRGDNSKEVLLA--------- 649

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                      Y    ++  A     +   N+K       + +   + E   +G      
Sbjct: 650 ---------DTYAFTGKFKEAARLYQKSGNNSKALAMYSDLRMFDLAQEFLKEGSAADKK 700

Query: 247 HDA-IESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHLLS 304
                 +   C      +  AA+ L+S  + ++A  I+ E+ W       + +I   L +
Sbjct: 701 ELIRRRAEWACSVHEPRA--AAELLLSAGESQRAIEIVAEQGWTDV----LLDIGRRLNA 754

Query: 305 ENT------VGKLKRALRLEEINKESVESLVIVSK------IALEMGSIDQAHAKAMLAM 352
                       L+R   L      + E    + +      + +E     +A   A    
Sbjct: 755 SEKEPLELIATHLRRLKAL----PLAAEIYRKLGEEEQVVQLHVEARDWPEAFRLAEHLP 810

Query: 353 KIAPR 357
           KI P 
Sbjct: 811 KILPS 815


>gi|110738736|dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
          Length = 808

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  L   +    +W      + +   +    +G ++++     E+  LC     A     
Sbjct: 292 LLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLG 351

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +L    + R A   LE+   + P     H ++A+   H + E+    ++   R  ++  
Sbjct: 352 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHSMGEDERA-IEVFQRAIDLKP 409

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++L  +  + +++G   +A       + + P      L   +    +  T++     
Sbjct: 410 GHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLNKAVSLLGAGETEEAKRAL 469

Query: 383 QSALH 387
           + AL 
Sbjct: 470 KEALK 474



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              RA+ L+  +L     G+  A+     E++ L  +   A    A SL S  +  +A  
Sbjct: 342 THFRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIE 399

Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331
           + ++   + P H +    +  +Y  L      G+ +RA       L         + +  
Sbjct: 400 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLTVW-PNHWRAQLNK 452

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   L  G  ++A      A+K+  R
Sbjct: 453 AVSLLGAGETEEAKRALKEALKLTNR 478


>gi|313224512|emb|CBY20302.1| unnamed protein product [Oikopleura dioica]
          Length = 929

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 105/301 (34%), Gaps = 41/301 (13%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+QY    E  + ML+      P   +  +        + GD+ SA+    +A +
Sbjct: 565 RAAFLEKQY-GTKESYDNMLERAVKACPREEKLWLMG-AKSKWQQGDIRSARGILEQAFE 622

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------LIARSLE 235
            +  +  +  A V+      E  RA   L + + +A                  +  +++
Sbjct: 623 SNQQSEEIWLAAVKLESENNELLRARQILARARTSASSPRVMMKSAKLEWCLGELKNAIK 682

Query: 236 NADKG----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +D+G                      D  ++     + ++ C +S    I  A    S+
Sbjct: 683 LSDEGLAKYPKFDKLWMMKGTIFLQMKDANSARKAFAKGIENCKDSKPLWILLADLEESE 742

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIV 331
             + KA  +LE+    NP  PE+      L    +      R L      +E   S  + 
Sbjct: 743 GNQVKARSVLERARLKNPASPELWKRAIELEKRVSGNEIADRLLSRAGAMQECAASGSLW 802

Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++ A+E  S      K++ A+K      ++ L +A++  +     +K   W +      P
Sbjct: 803 AE-AIECASRPARKTKSIDALKKCEHDPQVLLAVARMFWSERR-INKAREWFKKCTKIDP 860

Query: 391 D 391
           D
Sbjct: 861 D 861



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 32/230 (13%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A+       + +P  P  W+  A +++  +    + A   +    +   +  ++  
Sbjct: 276 DVRKARLLLKSVRETNPKQPQAWIGSARLEE--VVGRLAEARVLI---MQGTDKCPKSED 330

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEK 285
           + L A  L  AD+   I +      ++    NS+     AA     +  KR+  +  LE 
Sbjct: 331 VWLEASRLAPADQAKKIFA-----AAVAEIPNSVRIWCAAANLEKEKKAKRRVYQRALEN 385

Query: 286 IWKVNPHPE---IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +      P    +      L   ++    L RA    E    S E  + ++K+     + 
Sbjct: 386 V------PNAVRLWKAAVELEEIDDAKELLTRA---VECCPSSAELWLALAKL----ETY 432

Query: 342 DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           D A      A    P  K +++  A++E+AN  +    +   + AL A+ 
Sbjct: 433 DNARKVLNKARATIPTDKSVWITAAKLEEANGKSERCAIV-IKRALEALR 481


>gi|167623974|ref|YP_001674268.1| tetratricopeptide repeat-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167353996|gb|ABZ76609.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
          Length = 386

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 92/247 (37%), Gaps = 26/247 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + +    + ++  P      R+ A+  L  +    G  + A+      ++    +  
Sbjct: 83  GEVDRSIRIHQNLIARPSLTTEQRDLAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEE 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y + K+W +AI  + + K+K  +E   + A      + E  D+   + +   
Sbjct: 143 AETQLIAIYQVTKDWQKAIDIIKKLKRKRQQELKHDTAHFYCELADETEDETLKLKNLQL 202

Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK--IWKVNPHPE-IA---NIYTH 301
           AI+    C      ++ A A+  + Q + +  +  +EK     ++  P+ +A     Y  
Sbjct: 203 AIKQDSQCPR----ALLALAEQYLRQEEFKACKQAIEKLLTTDIDFLPDALAIAKQAYL- 257

Query: 302 LLSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           + +++T         L     E+       + +++  +E G    A    M  +   P  
Sbjct: 258 ITNDSTG-----YQELLREAIENGAGASITITLAQHMIEQGHPKDAEKLIMEGLIRHPTM 312

Query: 359 EIFL-LL 364
           + F  L+
Sbjct: 313 KSFQHLM 319


>gi|47848089|dbj|BAD21873.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
           Japonica Group]
 gi|47848095|dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
           Japonica Group]
          Length = 953

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 14/240 (5%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181
            LL               +  E +   P       Y     +    GD++ A RY   A+
Sbjct: 116 LLLGAIYYQIRNYDMCIAKNEEALAIDPN--FAECYGNMANAWKEKGDVDLAIRYYLTAI 173

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P+       +   Y     W   +    Q  + A   N                +G 
Sbjct: 174 QLRPNFCDAWSNLASAYT----WKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGF 229

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +Y+  IE+L++     +A    A   +      KA +  ++  K+   P  A+ Y +
Sbjct: 230 IQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLK--PSFADAYLN 287

Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +       +   +    R  +   +   +   ++ I  E G +D A      A+   P
Sbjct: 288 QGNVYKTMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 56/188 (29%), Gaps = 18/188 (9%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-- 151
             +  A +          +    +  L  L++ Q          A+    E +   P   
Sbjct: 194 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYNCYIEALRIDPQFA 248

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                +  L+ E+   GDL+ A  Y  +A+ + P            Y        AI   
Sbjct: 249 IAWSNLAGLFMEA---GDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISY 305

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +   ++    A+     +    ++G +  +     +++      + A      +L 
Sbjct: 306 QRAVQARPDY----AMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALK 361

Query: 272 SQNKKRKA 279
              +  +A
Sbjct: 362 DAGRVEEA 369


>gi|315180633|gb|ADT87547.1| tetratricopeptide repeat family protein [Vibrio furnissii NCTC
           11218]
          Length = 389

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 99/339 (29%), Gaps = 59/339 (17%)

Query: 98  HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +       + L      +  +     + A    E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIEQKNLALQQLAKDYMVSGFLDRAERIFEQLVDEPEHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +   Y   +EW +AI   +   
Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIDCAHALI 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  ++  +   A      +++    G    +     ++L+     + ASI   K  +   
Sbjct: 169 KMGRKRMKASIAHFWCELAMQEKADGHDNKAIQLFKKALQEDPKCVRASISLGKLYLESE 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
             +K    +E +      +     P +A  Y HL  E  + +  R   + +    S E  
Sbjct: 229 DYKKTIQYMEMVLDQDIDFIGEVLPTLAECYHHLGQEQELVQFLR-QCISDKAGVSAE-- 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS-- 384
           ++++++  +   +  A       +   P  + F  L    I +A        L   Q   
Sbjct: 286 LMLAQLVAQHEGVASAQELLTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQKLV 345

Query: 385 --ALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
              L A   P +       S+    W    P  K     
Sbjct: 346 GEQLKAK--PHYRCRRCGFSTHSLYWH--CPSCKGWGSI 380


>gi|289548649|ref|YP_003473637.1| hypothetical protein Thal_0878 [Thermocrinis albus DSM 14484]
 gi|289182266|gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
           14484]
          Length = 850

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 20/175 (11%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSL--YFESCRIGDLNSA 173
            +     LL+ +  L       A   L      P T RE  +  L  + E     D N A
Sbjct: 457 DDRLQARLLKAEAYLLLGNPAKARSYL-----TPQTDRELYLLGLSYFME----EDYNKA 507

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIA 231
             + ++  + SP  P     +   +    + S+A     +  +   +  + R   + L+ 
Sbjct: 508 VEFFSRVPESSPLRPQALLKMGDAFYNMGDLSKAQETYRKVIEEYPDTPYARQATLALLE 567

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVIL 283
               N +         D +   K   +S  A       AK  I QN+   A+ +L
Sbjct: 568 AKPTNMNIEQETKLIEDYL---KKDPDSPTAQHLKLQLAKLYIQQNRLSDAQRLL 619


>gi|254670171|emb|CBA05243.1| putative membrane protein [Neisseria meningitidis alpha153]
          Length = 402

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 112/347 (32%), Gaps = 49/347 (14%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155
              AR++   + QQ   ++  L      ++     + + A    + +L  P T    R  
Sbjct: 70  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQTLLDSPDTTGAKRAR 126

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213
            ++ L       G ++ A++     L +     A    + ++  Y   ++W +AI     
Sbjct: 127 VLFELAQNYQSAGLVDRAEQIF---LSLQDGEMAREARQHLLNIYQQDRDWEKAIETAQL 183

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAKSL 270
              + + +    A      +     K +   +      A+E+ K C     A++      
Sbjct: 184 LSHDEQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKC---TRANMILGDIE 240

Query: 271 ISQNK---KRKAEVILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRALRLEE 319
             Q       +A   +E+    +      ++ + Y      E  + +L    +    L+ 
Sbjct: 241 YRQGNFPASVEAYAAIEQQNHAYLSMVGEKLYDAYAAQGKPEEGLNRLIGYMQTFPELDL 300

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL-AQIEQANS---HN 374
           IN    +SL++  +         +A   A+  ++  P    ++ LL  +I   +     +
Sbjct: 301 INVVYEKSLLLRGE--------KEAAQTAIELVRRKPDLNGVYRLLGLRISDMDPTWKAD 352

Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            D +       L      ++   + +  S    W    P       F
Sbjct: 353 ADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395


>gi|317504510|ref|ZP_07962486.1| tetratricopeptide (TPR) domain protein [Prevotella salivae DSM
           15606]
 gi|315664371|gb|EFV04062.1| tetratricopeptide (TPR) domain protein [Prevotella salivae DSM
           15606]
          Length = 557

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 71/248 (28%), Gaps = 31/248 (12%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAH------------NIPLARKMHSYVSQQHTFHNE 119
           L      +  +K  + +  G   +A              N     +    + QQ+     
Sbjct: 296 LSMYKDPQEREKQIRNMSEGFRELADGILPELRRSRLIINYQTIGRSDDQIQQQYAADPT 355

Query: 120 YLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            L    LL    A      N      +   ++      A  +L   +   GD  +AQ Y 
Sbjct: 356 KLSLEELLYA--ASLTNDKNAKKAIYKKTTELYDRDYRAYNNLAALALNDGDEQTAQSYL 413

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR----- 232
            KAL ++  AP          +     + A   L+   +    +N     L IAR     
Sbjct: 414 EKALQVNRKAPEAFANKAYIDLTHGRIADAERHLSDATEANG-FNEVLGNLHIARGNYAN 472

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI---------CAAKSLISQNKKRKAEVIL 283
           + +     +  A+    +    +     + +I           A     Q K   A   L
Sbjct: 473 ASDELFNNNNSAALAQLMNKNYVAAEQTLKAIQQPNGLTYYLFAVLNARQGKNDAAGTYL 532

Query: 284 EKIWKVNP 291
           +   + +P
Sbjct: 533 KDALQKDP 540


>gi|325107574|ref|YP_004268642.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324967842|gb|ADY58620.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 471

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 66/206 (32%), Gaps = 21/206 (10%)

Query: 160 LYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           L+ +           +  A       P  P+      Q          A++ + +   N 
Sbjct: 11  LFSQKRYQEALAEVGRHLAE-----QPHEPYGLALRGQILAELDRKDEALSSVYEAIANG 65

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            + +     +  A        G    +    +E+++L  +        A + + Q++ + 
Sbjct: 66  PDND----YVHFAHGYVLLKSGKSKDAEAALLEAIRLAPDHAEHYSLLAATYLDQSRWKD 121

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI-------NKESVESLVIV 331
           A    +   +++P  E    +  +     + +L+R    +++       N E   +    
Sbjct: 122 ALKTCDAALELDPDDERVLNFKSM----ALRRLRRKEESQQLSEEALRRNPEDPMTHANR 177

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
               LE G  +QA      A+++ P 
Sbjct: 178 GWQLLEAGKHEQALEHFKEALRLDPD 203


>gi|300312352|ref|YP_003776444.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
 gi|300075137|gb|ADJ64536.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
          Length = 570

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 10/195 (5%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQ 148
           G ++ A      A        +     +E  + L     +    E ++  A      +++
Sbjct: 44  GSVAAAQGRFAEAALAWQQALRLLPPDSEEALALRYRLGRAFYEEGRFEDAFLLYRELIE 103

Query: 149 I----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
                P     A  +L   S    +   A     +AL   P            +  A++W
Sbjct: 104 SGWQLPELFVAAAAALQGMSPSGKNDPQALALLEEALQRDPGQADTWHRKAALHERARQW 163

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A   ++Q  +     +  RA   +A  L    +G    +     ++L L    + A +
Sbjct: 164 DAARQCIHQALR----LDDQRAQYWLAAGLVEHAQGQFEEALRYYDQALILAPELVDAHV 219

Query: 265 CAAKSLISQNKKRKA 279
               +L    +  +A
Sbjct: 220 SRGTTLARLRQHEEA 234


>gi|262305009|gb|ACY45097.1| acetylglucosaminyl-transferase [Lynceus sp. 'Lyn']
          Length = 288

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 6/165 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   +    H + L  L    I   +     A       L +      A 
Sbjct: 34  GQVQDAEDCYNTALKLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++ + A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDINGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
              +    A      +  + D G++  +      +LKL  +   A
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDA 192



 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   K       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVQDAEDCYNTALKLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|209527528|ref|ZP_03276030.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492016|gb|EDZ92369.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 530

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 82/254 (32%), Gaps = 14/254 (5%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y +L   L ++       A   +    + +   +E L  L    +  ++ ++        
Sbjct: 175 YMSLGQTLEAL--GETEEAIASYRRAYELNPNLSEALPKLQT--VLESQGRWEELATLYR 230

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
               +      +   L       G L+ A     KAL++ P+   + + + Q      +W
Sbjct: 231 RCCIVDPNSATSHKYLGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQW 290

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A+    +  +   + N       + ++L   D+  +  +     ++ +L   S     
Sbjct: 291 EAAVDIFRKATQ--VDPNSASFYHQLGQALTKCDR--LSEALAAYQKASELHPTSTPVLF 346

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEE 319
              + L       +A    +K   +NP P  A I THL       +     +       E
Sbjct: 347 DLGQVLTKLYHWSEAIATYQKALYLNP-PNQAEIQTHLQEVQDKQRHLDEEIAAYSESHE 405

Query: 320 INKESVESLVIVSK 333
            +  S ES    ++
Sbjct: 406 FHPNSSESYEKFAQ 419



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 92/268 (34%), Gaps = 14/268 (5%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPAT 152
             +  +  A + +    +     +  LV +L+   Q+     Q+  A +      Q+   
Sbjct: 251 ANSGKLSEAAESYQKALEL----DPNLVEILQPLGQVLTQLNQWEAAVDIFRKATQVDP- 305

Query: 153 REFAVYSLYFESCRIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
              + Y    ++    D  + A     KA ++ P +  V   + Q       WS AI   
Sbjct: 306 NSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQVLTKLYHWSEAIATY 365

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +        N+      +    +     D   + +   ES +   NS  +    A+ L 
Sbjct: 366 QKALYLNPP-NQAEIQTHLQEVQDKQRHLDEEIAAYS--ESHEFHPNSSESYEKFAQFLR 422

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESL 328
           S+ K   A +   +   +NP   +A+    YT    +     +    +  E+N  S    
Sbjct: 423 SKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYQKAGELNPYSPHVQ 482

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             + +  +E G +++A A    ++ I P
Sbjct: 483 YHLGQALVEEGRLEEAIAHFKQSITIDP 510



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 11/200 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +  R G L+ A     +A+  SP + W    + +      +   AI       + A E 
Sbjct: 10  NQLLRKGQLDEAIASYNQAIAASPKSAWYYHNLGEALSQQGKIDEAI----AAYRQATEL 65

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N N A            +G++  +     ++++L           A  LI Q    +A  
Sbjct: 66  NPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEEAVS 125

Query: 282 ILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +L+K  ++    + A +Y  L       +     +    +  E+N    +  + + +   
Sbjct: 126 LLQKAIELTA--DDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLGQTLE 183

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
            +G  ++A A    A ++ P
Sbjct: 184 ALGETEEAIASYRRAYELNP 203


>gi|193786049|dbj|BAG50938.1| unnamed protein product [Homo sapiens]
          Length = 901

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495



 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636

Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           +   S    WV + +            A     +  ++ +++ +    L + +      K
Sbjct: 637 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 682

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
             M  +     + LK C +S    +  ++      +  +A  ILEK    NP +P +   
Sbjct: 683 EMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 742

Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356
              L     +  +  A  L     +E   S ++ S+ A+ + +  Q   K++ A+K    
Sbjct: 743 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 799

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              + L +A++  +      K   W    +    D
Sbjct: 800 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 833


>gi|27804872|gb|AAO22907.1| adventurous gliding motility protein K [Myxococcus xanthus]
          Length = 2516

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 94   SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
            +  A +      +H+  +      N      +  + A    Q   A E    + +I    
Sbjct: 1605 AALAVDAECRPALHALGTMYERSGNWPFALEMLSKEAELAGQSKDAVELYYRLGKINEDM 1664

Query: 154  EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                           D  SA+    +AL + P       A+       K+WS     L Q
Sbjct: 1665 LM-------------DTGSARTAYQQALAVDPGHLPSIRALKGIQEQEKDWSGYEQTLRQ 1711

Query: 214  KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            + +  ++       LL         + D   +     E+LK   +S+ A+   +   I+ 
Sbjct: 1712 EAEQTEDPAAKGRALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAH 1771

Query: 274  NKKRKAEVIL 283
                  E +L
Sbjct: 1772 EDWASGERML 1781



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 35/322 (10%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            +   AR  +         H   +  L  +Q    E+ ++   + L    +          
Sbjct: 1667 DTGSARTAYQQALAVDPGHLPSIRALKGIQ--EQEKDWSGYEQTLRQEAEQTEDPAAKGR 1724

Query: 159  SLYF----ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFL 211
            +L       +    D ++A  Y  +AL   PD+      +   Y+  ++W+     +  +
Sbjct: 1725 ALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAHEDWASGERMLDIV 1784

Query: 212  NQKKKNAKEWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASIC 265
             +K       +++          + R    A+K G    +     ++ +L    + A   
Sbjct: 1785 TRKMAEMAVADKDSVSAADLCRQLYRLGYVAEKLGKRDKALGCYEKAYELDATYLPALEG 1844

Query: 266  AAKSLISQNKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLK 312
                L+   +   A  + + I  +  H E             + +I+  L   +      
Sbjct: 1845 YGNLLVQTRRYEGALKVFQTI--LIHHREELTDLEVVEVYWQLGDIHAALNQTDRAQ--N 1900

Query: 313  RALRLEEINKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQ 369
               +   I+     +L  +  +  + G  +++     + +  ++   R ++ L L +I +
Sbjct: 1901 HFEKALAIDPGHEPTLRALVALLEKQGQYEKSAELRQQLVGVLEGEARAKVCLELGRIAR 1960

Query: 370  ANSHNTDKILYWTQSALHAMPD 391
               H+    +    +AL + PD
Sbjct: 1961 DELHDPYMAIDAFTNALKSQPD 1982


>gi|239993639|ref|ZP_04714163.1| serine/threonine-protein kinase PksC [Alteromonas macleodii ATCC
           27126]
          Length = 1052

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 77/251 (30%), Gaps = 37/251 (14%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
           E+    D   A       +  +PD P  WV +A         ++  A   +    +  + 
Sbjct: 467 EALNSADTVEAI------IATTPDYPGGWVAKARNDLNT--GDYDGARQAVETLFQLSDL 518

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             + R +  LL  R+  N D      S    +       + +      A       +  K
Sbjct: 519 AVYWRLQGELL--RAELNEDLSLAQQSIDALVSQFPDRPDLLS---MRADIYQWAGEDAK 573

Query: 279 AEVILEKIWKVNPHP-----EIANIYTHLLSEN----TVGKLKRALRLEEINKESV-ESL 328
           A    +    + P+      E+A     +++ +    T   L RAL      K+   ESL
Sbjct: 574 AMSDYKAALALRPNNGQLWFELAR--LQIINGDIETATSDSLTRALVAFRQAKDPRGESL 631

Query: 329 VIVS--KIALEMGSIDQAHAKAMLAM-----KIAPRKEIFLLL-AQIEQANSHNTDKILY 380
           V+ +     L       A      A+     K  P +    L    I  + + +      
Sbjct: 632 VLNAFGIAYLRTADNVAAAQYFKDALALRDAKTQPSQRAKTLANLAIATSLTGDYATAEA 691

Query: 381 WTQSALHAMPD 391
             + A+  + D
Sbjct: 692 SLEEAVKLLHD 702


>gi|167647902|ref|YP_001685565.1| sulfotransferase [Caulobacter sp. K31]
 gi|167350332|gb|ABZ73067.1| sulfotransferase [Caulobacter sp. K31]
          Length = 673

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 23/266 (8%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVY 158
           A       +            L+           + A E +      ++Q P  +    +
Sbjct: 28  AMAAEQARAILEAVPRHAGATLMLAAALRLSGDLDQALEVVDPLARALVQSPEVQL--EH 85

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     R+G   +A     +A  + PD       + +   LA + + A     ++ K  
Sbjct: 86  GLVLA--RLGQTQAAIAAFKRATALDPDLAEGWRGLAEALDLAGDAAGAQAAQARQIKAG 143

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                    L+ A +      G +  +     + L++  +   A    A+      +   
Sbjct: 144 ----VRDPALMSAAAA--LVDGKLGVAEQILRDVLRVRPDEPAAIRMLAEVAARLGRHDD 197

Query: 279 AEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           AE +L +  ++ P      H     +Y    SE+ + +L    +L      +   L + +
Sbjct: 198 AETLLVRCLELAPGFTAARHNLATVLYRQGRSEDALVELA---QLLAGAPRNPAYLNLKA 254

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358
                +G   QA       +   P++
Sbjct: 255 AALARIGEYAQAIELLEDVLARFPQQ 280


>gi|145612561|ref|XP_367288.2| hypothetical protein MGG_07213 [Magnaporthe oryzae 70-15]
 gi|145019705|gb|EDK03933.1| hypothetical protein MGG_07213 [Magnaporthe oryzae 70-15]
          Length = 933

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 12/207 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E    G LN A+    +A   +P+   +  A V+      E   A   L   ++NA 
Sbjct: 606 LAKERLLAGQLNEARLVLGRAFQQNPNNEDIWLAAVKLEADHNEIDEARRLLTVARQNAP 665

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                   +   R L+N D     A+     E+L+L   +    +   +      +  +A
Sbjct: 666 TDRVWMRSVAFERQLDNKD-----AALELVQEALQLFPAAPKLWMMKGQIYEDMGQVPQA 720

Query: 280 EVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEIN---KESVESLVIVSKI 334
                   K  P   P +  +Y+ L  E     +K    L+       +S E    + ++
Sbjct: 721 REAYGTGVKAVPSSVP-LWLLYSRLE-ERNKNVVKARSVLDRARQAVPKSPELWCELIRV 778

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               G+  QA      A++  PR  + 
Sbjct: 779 ERRAGNTTQAKNLMATALRQMPRSGLL 805


>gi|110597763|ref|ZP_01386047.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
           13031]
 gi|110340670|gb|EAT59150.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
           13031]
          Length = 537

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               E Q     E     +++ +      ++L     + G+ + A     +A+ I+P   
Sbjct: 325 AYGREGQKQKKIEAYRQAVRLNSEYAVGWFNLAMAYVQNGETDKAIAAYQQAVRITPRDA 384

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   +    ++ +A+    Q  +   E     A  L++ +           +Y  
Sbjct: 385 SAWYRLGLVFSDGGQFDKAVKAYLQAVRITPE----NANYLLSLARAYGHAAQPSEAYEA 440

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              +L++  +   A +    S  + ++K +A     +  ++NP
Sbjct: 441 YKSALRINPDYTDAWVYLGISYENDHRKEEALHAYTEALRINP 483



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 14/225 (6%)

Query: 78  KRNYDKGYKALYTGLMSIAAH-NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
           +R  D     +  G   +A        +K+ +Y           + +       +   + 
Sbjct: 310 RRRPDYAQYWVDLG---VAYGREGQKQKKIEAYRQAVRLNSEYAVGWFNLAMAYVQNGET 366

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A    +  ++I      A Y L       G  + A +   +A+ I+P+      ++ +
Sbjct: 367 DKAIAAYQQAVRITPRDASAWYRLGLVFSDGGQFDKAVKAYLQAVRITPENANYLLSLAR 426

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y  A + S A        +   ++      L I+   ++  +     + H   E+L++ 
Sbjct: 427 AYGHAAQPSEAYEAYKSALRINPDYTDAWVYLGISYENDHRKE----EALHAYTEALRIN 482

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIY 299
            +   A     +  +      K   +    +    H  PE+A ++
Sbjct: 483 PDHNTALFNLGRFYLETGSVEKGMAV----YGRLKHLNPEMAQLF 523


>gi|119944202|ref|YP_941882.1| TPR repeat-containing protein [Psychromonas ingrahamii 37]
 gi|119862806|gb|ABM02283.1| Tetratricopeptide TPR_2 repeat protein [Psychromonas ingrahamii 37]
          Length = 880

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 38/243 (15%)

Query: 123 YLLEVQIALAERQYNIAHE-KLEMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180
            LL+   A AE  Y  A E  +  + Q P      ++  L     R      A++   K 
Sbjct: 636 NLLKASKAFAENDYPKAKEILIAALKQEPENITLLSL--LTDIEIRSEQYIEARKITDKI 693

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAIL--------- 228
             I P +   T      +V  ++  +AI  L    QK K+ +  ++   +L         
Sbjct: 694 AKILPKSSLATRLYAGIFVAQEKPQQAINLLTAYWQKTKDEQVADQLYLLLGNNNSEKAA 753

Query: 229 ----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                           +  +++   + G    +       LK   N +++   +A     
Sbjct: 754 AFLNEWQQAFPKSLTAIRYQAIYLQNNGKKEQALQVYQAQLKQTPNDVVSLNNSAWLYFE 813

Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEINKESVE--S 327
           Q     A  + EK +K+ P +  I + Y  +   +       K       ++    E  S
Sbjct: 814 QGNP-IAITLAEKAYKLMPENAAILDTYGWILYKNGERQQGKKLIEEAMRLSPNEPEIKS 872

Query: 328 LVI 330
            ++
Sbjct: 873 HLL 875


>gi|119193220|ref|XP_001247216.1| pre-mRNA splicing factor [Coccidioides immitis RS]
          Length = 940

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 37/265 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   KA + +P+   +  A V+    AK+  +A   L   ++ A 
Sbjct: 615 LAKEKWQAGEIDNARRVLAKAFNQNPNNEDIWLAAVKLEADAKQTDQARELLATARREAG 674

Query: 220 EWNRNRAILLIARSLENAD-----------------------------KGDMIASYHDAI 250
                   +   R L N+D                             +     +     
Sbjct: 675 TDRVWIKSVAFERQLGNSDTALDLVNQGLQLYPKADKLWMMKGQIYEVEKRYPQAREAYG 734

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
              + C  S+   + A++         KA  IL++       P+ A ++T  +  E    
Sbjct: 735 TGTRACPKSVPLWLLASRLEEKLGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 792

Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + +A  L     +E   S ++ S+    LE  +  +  +      K+     +F+ +A+
Sbjct: 793 NISQAKVLMAKGLQEVPTSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 851

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
           I        +K + W + A+ A  D
Sbjct: 852 IFWGERR-LEKAMTWFEKAIVANSD 875


>gi|89889650|ref|ZP_01201161.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89517923|gb|EAS20579.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 459

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 79/238 (33%), Gaps = 18/238 (7%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                A+  ++ A   LE       T     + L        D   A+    K +++S D
Sbjct: 50  ALAEKAKGNHDRAIVLLENCAAQEPTSGAVQFELAKNHLANKDFVKAELSVKKGIELSGD 109

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL--IARSLENADKGDMIA 244
             W+ + +   Y   KE+ +A+  + Q  K    +      L     +  +     + I 
Sbjct: 110 NEWMLDMLFDIYDEQKEYDKAVPVMEQLVKINDNYEEFLPTLYYRTGQYDKALKSLNDID 169

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVI--LEKIWKVNPHPEIA---N 297
           +   A ++ +             +SL+   Q + R    I  LE   + NP  E A    
Sbjct: 170 ARQGANDARRNALR---------RSLVNRQQQEVRNENNIESLEAEIERNPTNEQAYINL 220

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           IY H  + +     + A   E     S  + + + KI +E   ID   A     +   
Sbjct: 221 IYMHGRNGDKEALFEVAQDFERNVPNSDAAHLALYKIFIENDRIDDGVASLEKILTSD 278


>gi|15220436|ref|NP_172007.1| calcium-binding EF hand family protein [Arabidopsis thaliana]
 gi|75318061|sp|O23052|Y1515_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein
           At1g05150
 gi|2388582|gb|AAB71463.1| Contains similarity to Rattus O-GlcNAc transferase (gb|U76557)
           [Arabidopsis thaliana]
 gi|332189674|gb|AEE27795.1| Calcium-binding tetratricopeptide family protein [Arabidopsis
           thaliana]
          Length = 808

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  L   +    +W      + +   +    +G ++++     E+  LC     A     
Sbjct: 292 LLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLG 351

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +L    + R A   LE+   + P     H ++A+   H + E+    ++   R  ++  
Sbjct: 352 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHSMGEDERA-IEVFQRAIDLKP 409

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++L  +  + +++G   +A       + + P      L   +    +  T++     
Sbjct: 410 GHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLNKAVSLLGAGETEEAKRAL 469

Query: 383 QSALH 387
           + AL 
Sbjct: 470 KEALK 474



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              RA+ L+  +L     G+  A+     E++ L  +   A    A SL S  +  +A  
Sbjct: 342 THFRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIE 399

Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331
           + ++   + P H +    +  +Y  L      G+ +RA       L         + +  
Sbjct: 400 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLTVW-PNHWRAQLNK 452

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   L  G  ++A      A+K+  R
Sbjct: 453 AVSLLGAGETEEAKRALKEALKLTNR 478


>gi|326389037|ref|ZP_08210619.1| tetratricopeptide repeat-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206637|gb|EGD57472.1| tetratricopeptide repeat-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 650

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 11/206 (5%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V  L        D   A     +++  SPD      A+ +Q VL  +   A     Q+ +
Sbjct: 67  VRGLALAGMHRLDE--AVTALRESVRRSPDNYEAWRALGEQLVLLGDSGGADFAFAQQLR 124

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +  + +A      +     + D+  +     + LK     I A    A+      + 
Sbjct: 125 CQAKDPQLQA------AAVAMVRNDVPVAERLLKQFLKQHPTDIAALRMLAEVAGRIGRY 178

Query: 277 RKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           R A  +LE   ++ P  + A                 L++   L            + + 
Sbjct: 179 RDAIYLLEHALELAPSFDTARFNLATALYRFGENAKALEQLDLLLAKQPRHSSYRNLAAA 238

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKE 359
               +G +D A A     ++  P   
Sbjct: 239 ALGRIGDLDAAIAHYEYLVERHPAAS 264



 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 13/213 (6%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIA 231
           A+  A + L + P +                   A+T L +  + + + +   RA  L  
Sbjct: 47  AEEQAREILAVVPASGEAHLVRGLALAGMHRLDEAVTALRESVRRSPDNYEAWRA--LGE 104

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           + +   D G    ++   +           A++   +     N    AE +L++  K +P
Sbjct: 105 QLVLLGDSGGADFAFAQQLRCQAKDPQLQAAAVAMVR-----NDVPVAERLLKQFLKQHP 159

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAK 347
             +IA +         +G+ + A+ L E    +      +   ++      G   +A  +
Sbjct: 160 T-DIAALRMLAEVAGRIGRYRDAIYLLEHALELAPSFDTARFNLATALYRFGENAKALEQ 218

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
             L +   PR   +  LA        + D  + 
Sbjct: 219 LDLLLAKQPRHSSYRNLAAAALGRIGDLDAAIA 251



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 7/173 (4%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
            ++AL   L+ +   +   A    ++  Q      +    L    +A+      +A   L
Sbjct: 98  AWRALGEQLVLL--GDSGGAD--FAFAQQLRCQAKDP--QLQAAAVAMVRNDVPVAERLL 151

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +  L+   T   A+  L   + RIG    A      AL+++P        +        E
Sbjct: 152 KQFLKQHPTDIAALRMLAEVAGRIGRYRDAIYLLEHALELAPSFDTARFNLATALYRFGE 211

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            ++A+  L+      +  + +   L  A      D    IA Y   +E     
Sbjct: 212 NAKALEQLDL-LLAKQPRHSSYRNLAAAALGRIGDLDAAIAHYEYLVERHPAA 263


>gi|158335728|ref|YP_001516900.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158305969|gb|ABW27586.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 454

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 24/234 (10%)

Query: 116 FHNEYLVYLLEVQIALAERQ---YNIAHEKLEMML-----QIPATREFAVYSLYFESCRI 167
                L  L   Q+A +      Y+ A E     L       P  +      L   +   
Sbjct: 81  LDRASLATLYL-QLASSTGNTHWYHEAEETARQSLANLPFNNPEAQLA----LAKVAQAE 135

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
                A ++A   L  +P        VV   +   +  +A    +Q  + A        +
Sbjct: 136 HQFAEALQFAETVLQENPTNQQALSIVVTSKLAQGQLDQAQPVADQLVEQAPTL-----V 190

Query: 228 LLIARSLENADKGDMIASYHDAIESLKL-CDNSIM----ASICAAKSLISQNKKRKAEVI 282
               R+L    +G+  A+  D  ++L L   + +     A     +    + +   A+  
Sbjct: 191 SHTLRALVLVAQGEDQAALQDFQQALALEQPDQLSQSAWARTLLGRYYAHRGQLPLAKQY 250

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            ++  ++ PH   A +      E   G    A  L +   +  ES   +  +AL
Sbjct: 251 YQEALQLQPHSSFARVKL-AELETRQGNYGAAETLYQQLLQHPESSHGLDHVAL 303



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 68/220 (30%), Gaps = 24/220 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G L  A++Y  +AL + P + +    + +       +  A T   Q  ++ +  +    
Sbjct: 241 RGQLPLAKQYYQEALQLQPHSSFARVKLAELETRQGNYGAAETLYQQLLQHPESSHGLDH 300

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L   +     +G +  +     E+     +         + L     +R    +L   
Sbjct: 301 VALQGLAQLKVLEGKLTEASQLWDEAEHEFRDH--------QDLDHFGHRRDLAKLL--- 349

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                              +    L        + ++  E+L  ++     +    +A +
Sbjct: 350 ------------LARGHQADLPEALTLMQAEANLRQD-PETLKTLAWALSRLNRYGEAQS 396

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
               A+ +  +       A + +A+  N  +   + Q AL
Sbjct: 397 VLQDAIALGIQDASLFYRASLVEASLGNKAQAKVYVQKAL 436


>gi|116283326|gb|AAH05987.1| IFIT2 protein [Homo sapiens]
          Length = 412

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     H +I   Y          + K    +  + +  +     + ++      I
Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
             A A    A +       +  +LA +       E+A 
Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354


>gi|15673165|ref|NP_267339.1| hypothetical protein L198787 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724149|gb|AAK05281.1|AE006350_8 hypothetical protein L198787 [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 418

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 23/198 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154
            +   A  +      +    +  + + L  +    +  Y+ A  +   + +      T+ 
Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAI 208
               S+Y    RIGD  +       A   L+ S +     E + +    Y      +RAI
Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAI 223

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               + +K   E+        +A +       +  A+   A + +K   N++     A+K
Sbjct: 224 ANFKRLEKMDVEFLNYE----LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASK 279

Query: 269 SLISQNKKRKAEVILEKI 286
                  K  AE  L   
Sbjct: 280 ICFKLKDKAAAERYLVDA 297



 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 75/242 (30%), Gaps = 44/242 (18%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ L   +IA      + A   L  +         A+  +       GD  +A     +A
Sbjct: 69  LINL--AEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEA 126

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            ++S D+P +T A+ + Y    ++S AIT    K          R IL   +       G
Sbjct: 127 RELS-DSPLITFALAESYFEQGDYSAAITE-YAKL-------SERKILHETKISIYQRIG 177

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA 296
           D                                     A   LEK  + +  PE    IA
Sbjct: 178 DS---------------------------YAQLGNFENAISFLEKSLEFDEKPETLYKIA 210

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +Y    +E     +    RLE+++ E +   +  ++          A   A   MK  P
Sbjct: 211 LLYGETHNETRA--IANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNP 268

Query: 357 RK 358
             
Sbjct: 269 NA 270


>gi|327403299|ref|YP_004344137.1| hypothetical protein Fluta_1304 [Fluviicola taffensis DSM 16823]
 gi|327318807|gb|AEA43299.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 329

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 9/195 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-- 226
           D + +     KA  I P        +    +  +    A   ++ ++      N+     
Sbjct: 56  DFDKSLHDGAKAYRIQPWNTEA-RFLYANALNNRAERTASDVMSAQQHFKFVINKQPKNL 114

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             L+A +   A +GD   +++ + E+L++      A I      +S    + A+   +  
Sbjct: 115 AALVAIATTYAQQGDNEKAFYYSNEALRINKKYRDAYILKGSIYLSLGNTKLAKSSYQTA 174

Query: 287 WKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             ++  P+    Y  L     +E     ++  +   +I   ++E L  ++    E   I 
Sbjct: 175 --IDQDPDFFEAYVKLGLMYQAEQDPLCIEYFITASQIRPNNIEVLYNLAYAYQEFDKIP 232

Query: 343 QAHAKAMLAMKIAPR 357
           +A       +K  P 
Sbjct: 233 EAQQTYREMLKKDPS 247


>gi|237745406|ref|ZP_04575886.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
 gi|229376757|gb|EEO26848.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
          Length = 608

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 63/299 (21%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q     ++Y  A ++ E +L   +    A+YSL   S +  D  +A++Y   
Sbjct: 284 SLARLLVGQ-----KKYEQAKQEFEKLLSSDSQDLMALYSLGLLSVQQNDYRAAEKYLQS 338

Query: 180 ----ALDISPDAPWVTEAVV---------------------------------------Q 196
               A     + P  T+ +                                        Q
Sbjct: 339 YLVAAAAQEKEKPESTQVLFLLSQIAEEQRHYDKALQWLSQINPDADDEVALGVDIKKAQ 398

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y    +  +A   +    ++   + R R  LL+  +    D      + +     +   
Sbjct: 399 IYARKGKVDKARKII-ADMESKNPYERER--LLLTEAQILRDAKKTREALNILQAGMAEF 455

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRA- 314
             +       A +  +  +  + E  L++I K++P HP     Y + L  +   +  R  
Sbjct: 456 PENTNILYDYALTAENLGQYAEMEKALKRIIKIDPNHP---QAY-NALGYSLADRQLRLD 511

Query: 315 ------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
                  +  ++  +       +  +    G +D A      A ++ P  EI + LA++
Sbjct: 512 EAFTLIEKALQLAPDDPFITDSLGWVLYRQGKLDLAEKNLRQAYQLRPDNEIAIHLAEV 570



 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 71/219 (32%), Gaps = 19/219 (8%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L   +    D   A+  A KAL + PD+     AV+     +   S A+  L+   +   
Sbjct: 220 LAISALLKNDSARAREEAQKALALKPDSE---MAVLTFAQASASPSVAVEVLSGFLEKYP 276

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                R  L    +     +     +  +  + L      +MA        + QN  R A
Sbjct: 277 ASREVRVSL----ARLLVGQKKYEQAKQEFEKLLSSDSQDLMALYSLGLLSVQQNDYRAA 332

Query: 280 EVILE-----KIWKVNPHPEIANIYTHLLSENTVGKL--KRALRLEEINKE-SVESLVIV 331
           E  L+        +    PE   +   L       +   K    L +IN +   E  + V
Sbjct: 333 EKYLQSYLVAAAAQEKEKPESTQVLFLLSQIAEEQRHYDKALQWLSQINPDADDEVALGV 392

Query: 332 ----SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               ++I    G +D+A           P +   LLL +
Sbjct: 393 DIKKAQIYARKGKVDKARKIIADMESKNPYERERLLLTE 431



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 100/334 (29%), Gaps = 86/334 (25%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           Q    N+ L  +L   IA        A    E ML +              +   GD   
Sbjct: 70  QLLLTNDLLYQILSADIAEQRGLDIYA---YETMLDV--------------AKETGDPRL 112

Query: 173 AQRYATKA----------------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           A+R A  A                  ++P +      +V   VL           + K  
Sbjct: 113 ARRAAEIAVKNRNVKDALQAVRLWYRLAPQSGEAERYLVGFLVLDNRLDEVKDMFSSKLA 172

Query: 217 NAKEWNRNR-------------------AIL-------------LIARSLENADKGDMIA 244
            A    R                     A+L              ++ ++    K D   
Sbjct: 173 AASPEQRVSLFYQLQQILAGTKDKSDAFAVLEEVLVPYQNMPEAHVSLAISALLKNDSAR 232

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIY 299
           +  +A ++L L  +S MA +  A++  S      A  +L    +  P        +A + 
Sbjct: 233 AREEAQKALALKPDSEMAVLTFAQASAS---PSVAVEVLSGFLEKYPASREVRVSLARL- 288

Query: 300 THLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             L+ +    + K+   +L   + + + +L  +  ++++      A       +  A  +
Sbjct: 289 --LVGQKKYEQAKQEFEKLLSSDSQDLMALYSLGLLSVQQNDYRAAEKYLQSYLVAAAAQ 346

Query: 359 --------EIFLLLAQIEQANSHNTDKILYWTQS 384
                   ++  LL+QI +   H   K L W   
Sbjct: 347 EKEKPESTQVLFLLSQIAEEQRHYD-KALQWLSQ 379


>gi|222622881|gb|EEE57013.1| hypothetical protein OsJ_06783 [Oryza sativa Japonica Group]
          Length = 1004

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 14/240 (5%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181
            LL               +  E +   P       Y     +    GD++ A RY   A+
Sbjct: 116 LLLGAIYYQIRNYDMCIAKNEEALAIDPN--FAECYGNMANAWKEKGDVDLAIRYYLTAI 173

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P+       +   Y     W   +    Q  + A   N                +G 
Sbjct: 174 QLRPNFCDAWSNLASAYT----WKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGF 229

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +Y+  IE+L++     +A    A   +      KA +  ++  K+   P  A+ Y +
Sbjct: 230 IQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLK--PSFADAYLN 287

Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +       +   +    R  +   +   +   ++ I  E G +D A      A+   P
Sbjct: 288 QGNVYKTMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 18/188 (9%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-- 151
             +  A +          +    +  L  L++ Q          A+    E +   P   
Sbjct: 194 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYNCYIEALRIDPQFA 248

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                +  L+ E+   GDL+ A  Y  +A+ + P            Y        AI   
Sbjct: 249 IAWSNLAGLFMEA---GDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISY 305

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +   ++    A+     +    ++G +  +     +++      + A      +L 
Sbjct: 306 QRAVQARPDY----AMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALK 361

Query: 272 SQNKKRKA 279
              + ++A
Sbjct: 362 DAGRVKEA 369


>gi|158424856|ref|YP_001526148.1| putative Flp pilus assembly protein [Azorhizobium caulinodans ORS
           571]
 gi|158331745|dbj|BAF89230.1| putative Flp pilus assembly protein [Azorhizobium caulinodans ORS
           571]
          Length = 608

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 104/324 (32%), Gaps = 48/324 (14%)

Query: 86  KALYTGLMSIAAHNIPL------ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
            AL+  L +  +    L      A  +    + +H      LV   E     A+  Y  A
Sbjct: 2   NALHPSLCACGSGLRALRCCQLEASALGPAAASRHLL---PLVD--EAIACHAKGAYGEA 56

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                 +L++   +  A+  LY      G   +A+    + + + P+  W T+ +     
Sbjct: 57  ERLCLEVLELAPGQGGALAVLYQIRKMQGAGAAAEALVRRLVMLDPNNVWATQELALLLF 116

Query: 200 LAKEWSR----AITFL------------------NQKKKNAKEWNRNRAI---------L 228
              + +     A   +                     +    E++  RA+         L
Sbjct: 117 GKGDLAEGEIHARNAVRIAPTDPQSHNLMGMIMTEMNRPQVGEFHYRRALDLLGQRQPIL 176

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L   +    ++G M  S     ES  L    +   +  A+   +     +A+ +L++   
Sbjct: 177 LANLAWNLKNQGKMAESRALYEESFALAPTILQTVLGWARMEETDRNFARADELLDQAQA 236

Query: 289 VNP-HPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSID 342
           + P HP I          ++     L    R+ + N         L+   ++  +MG  D
Sbjct: 237 LAPGHPSILLHRAVVRGRTKQYDAALAILDRMAQQNPGGGLGTNDLLEKGRLLDKMGRYD 296

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQ 366
           +A A      ++   +     +A+
Sbjct: 297 EAFAAFAAGKRLNVEQSGVTYMAE 320


>gi|34558195|ref|NP_908010.1| hypothetical protein WS1901 [Wolinella succinogenes DSM 1740]
 gi|34483914|emb|CAE10910.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 351

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 22/188 (11%)

Query: 58  LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
           +  +  +F +          +R  ++  K            +     K    + ++    
Sbjct: 24  VIFLVTYFWNL-------RAQRRREQSLKKFSQLF------DHSSVDKDAKALFERGADF 70

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-----RIGDLNS 172
              L +L   +      +Y+ A +    ML+   T+E     L  ES      + G L  
Sbjct: 71  GATLGFL--AETYSKAGEYDKAIKIYLAMLE--QTQESGEKLLLLESLGETYFKAGFLER 126

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A++   + L  +P  P     ++Q      ++  A+  L+   +  ++  R +       
Sbjct: 127 AKKIFLEVLKNAPRNPKALFWLMQACENLGQFDEALEALDCLLELGEKSERVKFNHAYLS 186

Query: 233 SLENADKG 240
           +       
Sbjct: 187 AKRVLADP 194


>gi|309791088|ref|ZP_07685623.1| serine/threonine protein kinase with TPR repeats [Oscillochloris
           trichoides DG6]
 gi|308226872|gb|EFO80565.1| serine/threonine protein kinase with TPR repeats [Oscillochloris
           trichoides DG6]
          Length = 858

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 14/235 (5%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y  A    E  L I      A   + +   R      A      AL ++P+ P    A 
Sbjct: 613 DYEQARSAFETALDIDPNYSEAQLGIGWGYYRQDQGTKADEAFDTALSMNPNNPNTHYAK 672

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA----- 249
            +      E+  AI +  +  +         A L  A   E     +             
Sbjct: 673 GRIAFDNDEYRNAINYFERANQLNPRSTYTLAWLARAYQFEGFFADNDATRKDLYAKAES 732

Query: 250 --IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSEN 306
              ++L +  N   A+      L  Q K  ++  I E+  ++NP+ +    Y  L  S  
Sbjct: 733 IYRQALDIRPNFAFATSGLGWVLQYQEKYEESISIFERAIELNPNDD--EAYNGLGWSLF 790

Query: 307 TVGKL----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            + +L        +  ++          + +   E+G +D+A A     ++I P 
Sbjct: 791 NLDRLGDAETAFRQSTQLAPNYASPQYGLGRTLEELGRLDEARAAFKTTLEIDPT 845


>gi|291302798|ref|YP_003514076.1| LuxR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572018|gb|ADD44983.1| transcriptional regulator, LuxR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 900

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 84/245 (34%), Gaps = 21/245 (8%)

Query: 137 NIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           +      E++   P       +  L   +   GD ++A   A  AL I  +    T  V 
Sbjct: 475 DDLRRAHELLASEPDDNARGRLLGLMAMATYRGDADTALELARDALRIGRETGDPTVTVR 534

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--ILLIARSLENADKGDMIASYHDAIESL 253
              V+    S  +  L +     +E   +     +L+  ++ +A +GD   S   A   +
Sbjct: 535 GLLVVGGVTSN-LDMLTEALSITEELRDHDLEITVLMYLAMHHARQGDHGESARAARGGV 593

Query: 254 KLCDNSIMA-------SICAAKSLISQNKKRKAEVILEKIWKVNPHP---EIANI---YT 300
                  +A       +   AK+L+      +A  +++      P P   +I      + 
Sbjct: 594 DRAQRLGLARSRGTHLAGHLAKALLLSGHWDEAASVVDSALAEGPPPMSRDILRAVAGHL 653

Query: 301 HLLSENTVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +L  +T    + A+ L    E +    +   V +   AL  G ID+A      A+    
Sbjct: 654 AVLRGDTDTAAELAVDLESGDERLGTHLLHRHVFLCLAALSEGDIDRAEEFLSRALSNPA 713

Query: 357 RKEIF 361
            + + 
Sbjct: 714 LRRVA 718


>gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 12/158 (7%)

Query: 133 ERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
              +  A     + +   P          +  +   +GD   A     KA++I P     
Sbjct: 533 SGDHQGAIADYNKAIELDPQHAFAFNNRGIAKD--NLGDHQGAIADYNKAIEIDPKYASA 590

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                      K++  AI   N+      ++    A+    R      +GD   +  DA 
Sbjct: 591 YNNRGYAKSDLKDYQGAIADFNKAIAINPQY----ALAYTNRGWFKYLQGDFQDALKDAN 646

Query: 251 ESLKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKI 286
           ++L +  N    +    + L      + R A   L++ 
Sbjct: 647 KALAITPN--DGATLDTRGLAKHALGQDRSACKDLKRA 682


>gi|71022665|ref|XP_761562.1| hypothetical protein UM05415.1 [Ustilago maydis 521]
 gi|46101431|gb|EAK86664.1| hypothetical protein UM05415.1 [Ustilago maydis 521]
          Length = 558

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 80/253 (31%), Gaps = 31/253 (12%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIG 168
                   +     L+  +I LA+     A    +  +   P                  
Sbjct: 234 ADALRADSSNPEALLVRARILLAKGDTAKAIAHCQAALRSDPE----------------- 276

Query: 169 DLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             + A+    K   +         +          + ++ A+       +        +A
Sbjct: 277 -QSGARDLLKKCRRLEAKKEEGNTSFKKGDNLAAVRSYTEALEIAGDNSQRDGPAQGFKA 335

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           IL   R+  N+ KGD  A+  D   +L+L    + A    A++L++  K   A    +  
Sbjct: 336 ILYSNRATANSKKGDHKAAIADCDAALQLDPGYVKALRTRARALLATEKYEDAVRDFKSA 395

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVSKIALEMGSIDQAH 345
            +       A++     +E    +L+ A   L+   K+    ++ V+K   +    D   
Sbjct: 396 LQE------ASVSGGREAEQLQRELRSAEIDLKRSKKKDYYKILNVAK---DASDSDIKK 446

Query: 346 AKAMLAMKIAPRK 358
           A    ++K  P K
Sbjct: 447 AYRKESLKHHPDK 459


>gi|302036314|ref|YP_003796636.1| hypothetical protein NIDE0948 [Candidatus Nitrospira defluvii]
 gi|300604378|emb|CBK40710.1| protein of unknown function, TPR-like [Candidatus Nitrospira
           defluvii]
          Length = 424

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 8/150 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A + L +       R     +L+    ++GD + A      AL   P        +  
Sbjct: 73  TQARQALHLEPDAQEPRLTLGRTLF----QLGDTDGAIDEYRTALRFHPTVAQAHLDLGT 128

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +  ++W  A+T L +  +      +       +    +  +G++ ++     E+L+L 
Sbjct: 129 ALMAKQDWRNAMTELQEAVRLDPTLVQ----AHYSMGTIHYTRGNVQSAIKAYQEALRLK 184

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +   A       L    + + A   LE  
Sbjct: 185 ADFAEAHYRLGLVLKVAGRDKDAAQELESA 214


>gi|262304993|gb|ACY45089.1| acetylglucosaminyl-transferase [Hanseniella sp. 'Han2']
          Length = 290

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +          + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVAEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L +      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYTEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 56/181 (30%), Gaps = 13/181 (7%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL++        A + ++   +    H + L  L    I   +     A       L +
Sbjct: 33  KGLVA-------EAEECYNTALRLCPTHADSLNNL--ANIKREQGYTEEATRLYLKALDV 83

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A  +L     + G LN A  +  +A+ I P        +       ++   A+ 
Sbjct: 84  FPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQ 143

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  +    +    A      +  + D G++  +      +LKL  +   A    A  
Sbjct: 144 CYTRAIQINPGF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHC 199

Query: 270 L 270
           L
Sbjct: 200 L 200


>gi|152969830|ref|YP_001334939.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238894338|ref|YP_002919072.1| tetratricopeptide repeat protein [Klebsiella pneumoniae NTUH-K2044]
 gi|262042993|ref|ZP_06016137.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150954679|gb|ABR76709.1| putative heat shock protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546654|dbj|BAH63005.1| putative heat shock protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259039710|gb|EEW40837.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 389

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 37/192 (19%)

Query: 98  HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  S   T+    L      +  +A   Y+ A +  + ++     R  
Sbjct: 83  GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLG 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + ++Q Y    +W  AI    +  
Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE +R   A      +L+     D+  +     +      NS   SI   +  + + 
Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLRKGAAADRNSARVSIMMGRVWMEKG 228

Query: 275 KKRKAEVILEKI 286
              KA   LE++
Sbjct: 229 DYAKAVESLERV 240


>gi|283779948|ref|YP_003370703.1| hypothetical protein Psta_2170 [Pirellula staleyi DSM 6068]
 gi|283438401|gb|ADB16843.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 438

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 11/165 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           + +A +    ++G    +     ++LK+    +   +  A+    Q +  KA  +  K  
Sbjct: 126 VYVAAARLLENQGKFEEAQAQYDKALKVSPKDLNTLVSLARMYDRQGQSAKAVELYRKA- 184

Query: 288 KVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            +  HPE    Y  L       ++    +    +  E+   +V+    ++ + +E G  D
Sbjct: 185 -IAAHPESGMAYNDLGLCYARQKDLPQSMANLHKAVELQPANVKYRNNLATVQVEAGRAD 243

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           +A           P+      +  + +   +      +    A+ 
Sbjct: 244 EAIKTLSAV---NPQAVAHYNVGYLLEQKGNAQGAAQH-MARAVE 284


>gi|239907744|ref|YP_002954485.1| hypothetical protein DMR_31080 [Desulfovibrio magneticus RS-1]
 gi|239797610|dbj|BAH76599.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 785

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 9/191 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTE 192
            +   A    +  L I         +    +    G L  A +    +L I+PD P    
Sbjct: 96  GRTEEAMACFDRALDIDP-EAVGARNNRGNALESQGQLEEACQEYEASLAIAPDQPRTLY 154

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +          + A+           ++    A  L    +     G    +   A  +
Sbjct: 155 NLANTLYALGRPAEAVPRYQAALALCPDY----AYALANCGVALTALGRAAEAEDYARRA 210

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVG 309
           L+L    + A I  A +LI++     A  ++E    + P PE+  ++            G
Sbjct: 211 LRLEPGLVEARILLANTLIARGYPADALTVVEAGLDLTPGPELRRLFVACLRGQPAPAAG 270

Query: 310 KLKRALRLEEI 320
             +R   L  +
Sbjct: 271 TPRRERLLAAL 281


>gi|189424871|ref|YP_001952048.1| hypothetical protein Glov_1812 [Geobacter lovleyi SZ]
 gi|189421130|gb|ACD95528.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 406

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 17/149 (11%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            A         +   +L    T               GD ++A     +AL +SPD   V
Sbjct: 34  QAAGDR---IVRYNQLLLKADTAYL-----------SGDYSTAISAYQEALRLSPDNQLV 79

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            + + + Y  A E   A+       K   +     A +     +    +G++ A+  +  
Sbjct: 80  YQKLGEAYFSAGEDEEALATFKTYLK---KSTSTSARIHYVSGVLLERQGNIDAALDEYN 136

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKA 279
            ++ +      A    A   I + + +KA
Sbjct: 137 AAMAIDPIHSGARRRRADIYIIRGEFKKA 165


>gi|86159730|ref|YP_466515.1| hypothetical protein Adeh_3311 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776241|gb|ABC83078.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 4074

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 14/159 (8%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R GD  SA     +ALD+ P          +    A  ++ A+  L +    A     + 
Sbjct: 330 RFGDAESALAALRRALDLDPACETAALQAFEHEFDAGRFAEALEVLERHLAAAPAKPAHA 389

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + + A +L     GD   +      +L+       A++  A  L    + +    +LE 
Sbjct: 390 PLRVRAAALAREKLGDPARARRHLEAALRADPGHAAAAVALAPLLAEAGEWQPLARVLE- 448

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
                         +     +   +++   RL EI +E 
Sbjct: 449 -------------LSARRERSPGERVRLLERLAEIQQEH 474



 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 1/131 (0%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    + L + P  P    A+V+      +W+     L ++     E     A+ L   
Sbjct: 48  AEDLYRQLLQLEPAHPVALRALVELLEERGDWAGIAAALEREATATAEPVAAAAVTLRLA 107

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            ++    G    +      + +L  +   A   A +   +  +  +A+ +L+        
Sbjct: 108 KVQEERLGRRDRAALLYARAHRLDPSLEEARARALECFGALRRFAQAKRLLDGARDAGAE 167

Query: 293 P-EIANIYTHL 302
           P  +A  Y  L
Sbjct: 168 PRALAAEYARL 178



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 8/235 (3%)

Query: 95   IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATR 153
            +A      A      V        E LV L++   A A+ +    A  +   + ++P  R
Sbjct: 2080 LAHGEPARAAAAWQKVLDLAPDDREALVGLIDALEAGADPEALAQALRRGLAVEELPEGR 2139

Query: 154  EFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               +  L   +  R+GD   A +   + L++SPD       + +  V A+ W      L 
Sbjct: 2140 AHLLRRLAAVQDERLGDAAGAIQSLKRLLELSPDDREALARLDRLCVKAERWVDLGDVLA 2199

Query: 213  QKKKNAKEWNRNRAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAAKS 269
            ++   A E      + ++ + L    +    D   +     E L+   +   A       
Sbjct: 2200 REIAAAAEAGDANVLGVLRQRLAELKEHRLLDREGALELYEEVLRARPDHPEALARLEAM 2259

Query: 270  LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLEEIN 321
            L       +A V LE+ +     P          +    +   +    L L E+ 
Sbjct: 2260 LQKDPGNARAAVALERAYAAAGDPLRQAAVLEQRAGERPDPQERKALYLALAELR 2314



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 41/134 (30%), Gaps = 7/134 (5%)

Query: 160  LYFESCR-----IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            LY E+ R       D  SA RY  +AL  +P        +   YV    W+ A   L   
Sbjct: 3312 LYTEAARVYQEERDDRESAVRYYEEALKRTPGHLDAARPLSDIYVAQARWADAERVLAVI 3371

Query: 215  KKNAKEWNRNRAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                      R +           +  G +  +      + +L    + A       L+ 
Sbjct: 3372 VGVLDSAGDARELCRQCYRQGYVAEKLGRLDKALASYRRAYELDATYLPALEGLGNLLVR 3431

Query: 273  QNKKRKAEVILEKI 286
            + +  +A  I   +
Sbjct: 3432 REEWDEALRIFTAV 3445


>gi|113474024|ref|YP_720085.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110165072|gb|ABG49612.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 892

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 19/189 (10%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL   +    E ++  A    + + ++         +L      I     A      A+
Sbjct: 6   TYLKHGKNYSDEGKWEEAIFYYKKLTELQPNNWEVYQNLGNALLEIESWQDAVTAYRHAI 65

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-----------KKNAKEWNRN----RA 226
            ++P+  +    + +  +  ++W  AI    +            +K    + +     R 
Sbjct: 66  QLNPNLDFSHYQLGEALIKLEQWQEAIAAYQRALELNSNLPNIYQKLGDAFQQKITTDRI 125

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +L     E     D I  Y+ A+E   L  N +      A +L  + +  +A    +++
Sbjct: 126 AILNTYRQEIQQNPDNIQIYNRALE---LQPNDVEFCFGLANALAKKGEINQAINTYKRV 182

Query: 287 WKVNP-HPE 294
            ++ P HPE
Sbjct: 183 LRLQPTHPE 191


>gi|289627640|ref|ZP_06460594.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
          Length = 1104

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 60/295 (20%)

Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156
            A +       ++   N  L   L + +   A+ Q   A   L +   + P     R   
Sbjct: 334 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213
              L     + G L++AQ    + L      P     ++       +   A+  L+    
Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++    +  R +A+     +     +GD+ A+     +++K   +++      A+  + 
Sbjct: 450 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509

Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298
            ++  KA V+++++ K  P                                   P++  +
Sbjct: 510 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569

Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              +                     L    RL+ +   S E  + ++   ++   
Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDADE 624


>gi|239814618|ref|YP_002943528.1| tetratricopeptide repeat protein [Variovorax paradoxus S110]
 gi|239801195|gb|ACS18262.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 392

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 6/157 (3%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +Y  A    E +L         RE A ++L  +  R G L+ A+    K L+ +     
Sbjct: 85  GEYQRAVRVHEHLLGRGDLSRSDRERAQHALAQDFLRAGLLDRAEAALQK-LEGTRYENE 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              +++  Y  ++EW++A     +  + +   ++  RA  L  ++ E    GD+ A+   
Sbjct: 144 ARLSLLAIYERSREWAQAAAVAQKLDESDQASYSTRRAHHLCEQASEQVAAGDLAAAGRL 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             E++ L   +   +I +A   +      KA   L  
Sbjct: 204 LSEAVALAPQAPRPAIDSATLQLRNGDGAKAFDTLVA 240


>gi|90022461|ref|YP_528288.1| hypothetical protein Sde_2819 [Saccharophagus degradans 2-40]
 gi|89952061|gb|ABD82076.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
          Length = 471

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 82/236 (34%), Gaps = 25/236 (10%)

Query: 137 NIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           + A   LE MLQ     T  +        + +      A      AL +  +       +
Sbjct: 225 DQAQALLEGMLQANPKDTNLWLQRG--QIALKQQRPQQALSSLETALVLGENNADNIATL 282

Query: 195 VQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            Q ++ +   +RA+T L     K     N+   I  +   L    +   +A+   A++  
Sbjct: 283 AQLHIQSGSANRAVTLLANNITKMVANNNKIEVIDQVCAWLAYQQQWQQLANLTQALQKN 342

Query: 254 KLCDNSIMA------SICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSE 305
                 I A      ++ AA+   S  K + A  +LE+    +P     +  +   L S+
Sbjct: 343 TNN---IPAHYRSRFAVYAAQVAQSNGKTKHATKLLEEAVNNDPSNGEALLTLANILRSQ 399

Query: 306 NTVGKLK----RALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIAP 356
               +      RA  L     +  E  ++  +++ ++  +  +A     L  ++ P
Sbjct: 400 QRTQRANLYYIRAEALA----DYKERALLGRAQLEIDANNYPEALRLLRLVAQLNP 451


>gi|303312257|ref|XP_003066140.1| pre-mRNA-splicing factor prp1, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240105802|gb|EER23995.1| pre-mRNA-splicing factor prp1, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|320040137|gb|EFW22071.1| pre-mRNA splicing factor [Coccidioides posadasii str. Silveira]
          Length = 940

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 37/265 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   KA + +P+   +  A V+    AK+  +A   L   ++ A 
Sbjct: 615 LAREKWQAGEIDNARRVLAKAFNQNPNNEDIWLAAVKLEADAKQTDQARELLATARREAG 674

Query: 220 EWNRNRAILLIARSLENAD-----------------------------KGDMIASYHDAI 250
                   +   R L N+D                             +     +     
Sbjct: 675 TDRVWIKSVAFERQLGNSDTALDLVNQGLQLYPKADKLWMMKGQIYEVEKRYPQAREAYG 734

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
              + C  S+   + A++         KA  IL++       P+ A ++T  +  E    
Sbjct: 735 TGTRACPKSVPLWLLASRLEEKLGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 792

Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + +A  L     +E   S ++ S+    LE  +  +  +      K+     +F+ +A+
Sbjct: 793 NISQAKVLMAKGLQEVPTSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 851

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
           I        +K + W + A+ A  D
Sbjct: 852 IFWGERR-LEKAMTWFEKAIVANSD 875


>gi|242776072|ref|XP_002478770.1| heat shock protein (Sti1), putative [Talaromyces stipitatus ATCC
           10500]
 gi|218722389|gb|EED21807.1| heat shock protein (Sti1), putative [Talaromyces stipitatus ATCC
           10500]
          Length = 577

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 12/158 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A E     L    T +           ++  +  A+  A K   ISP+  
Sbjct: 337 AYEKLGDLTQAIEYYNRSLTEHRTADVL--------TKLRAVEKAKIKAEKDAYISPEEA 388

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                + Q+     +W  A+    +  K A +  R        R+           +  D
Sbjct: 389 EKARELGQKKFQEADWPGAVDAFTEMTKRAPDDPRG----FSNRAAALIKLMAFPQAVQD 444

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             E++K   + I A I  A++L +  +  KA   L + 
Sbjct: 445 CDEAIKRDASFIRAYIRKAQALQAMKEYSKALDALTEA 482


>gi|197285948|ref|YP_002151820.1| cellulose synthase protein [Proteus mirabilis HI4320]
 gi|194683435|emb|CAR44197.1| cellulose synthase protein [Proteus mirabilis HI4320]
          Length = 1091

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 63/382 (16%)

Query: 55  WILLFAVSRFFLSCP-AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           W LL       L+   +       +      YK      +     +I LA  +H     +
Sbjct: 278 WHLLAKADEALLNQEYSTAKRYFTQVRQLSPYK--SEAYI--GLGDIELA--LHQLEQAE 331

Query: 114 HTFHNE------------YLVYLLEVQIALAERQYNI--AHEKLEMMLQIPATREFAVYS 159
             +                L  L   Q      Q+      ++ + + Q         Y 
Sbjct: 332 RYYQQALQYQPNDAATLHSLTKLYRQQSHQKAAQFMANLTSQQYKNLAQD--------YG 383

Query: 160 LYFESCRIG---DLNSAQRY-----ATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITF 210
                 +     D    Q Y       KA+  + PD  W    +    ++ ++   A  +
Sbjct: 384 YIISGIQQDLAADDEQQQHYLSAIEKRKAIAKAYPDEVWNIYRLADDLLITQQPQLAEDY 443

Query: 211 LNQ-KKKNAKEWNRNRAILL----IARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            NQ  ++   + +R  A  L      R+ +  +    I     +     L        I 
Sbjct: 444 FNQLNQRRPNDPSRRYAYALYLNKTGRAQQALNTLKTIPLSQRSESMNALDSQLRFGQIM 503

Query: 266 A-AKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRL 317
           A A+SL   N++++A   L   +   P PE       +   +     +     L     +
Sbjct: 504 AHAQSLREHNQQQQAVEYL---FTHIP-PEQKIESYLLLAQWAE-EDDQLNQALNYYHTV 558

Query: 318 EEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQANSH 373
             +   + E+ ++ + +I+L    IDQA        +++P K        LA  E+   +
Sbjct: 559 LNLAPNN-ETALLGATEISLAQHQIDQARYYLAQIEQLSPEKFNHYSLRRLANAEKTAGN 617

Query: 374 NTDKILY--WTQSALHAMPDPL 393
                 Y  +    +   PD  
Sbjct: 618 IDKAKHYFIYLARQVDKEPDSA 639



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 81/290 (27%), Gaps = 43/290 (14%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALA 132
                         L   L         LA K +     +    +    +LL +   AL 
Sbjct: 238 RYSRANQRAPAIYYLSQAL--------TLAPKHNDSDLWRTLLQSNQYWHLLAKADEALL 289

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            ++Y+ A      + Q+   +  A   L      +  L  A+RY  +AL   P+      
Sbjct: 290 NQEYSTAKRYFTQVRQLSPYKSEAYIGLGDIELALHQLEQAERYYQQALQYQPNDAATLH 349

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++ + Y        A    N   +  K   ++   ++     + A   +    Y  AIE 
Sbjct: 350 SLTKLYRQQSHQKAAQFMANLTSQQYKNLAQDYGYIISGIQQDLAADDEQQQHYLSAIEK 409

Query: 253 LKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            K            AK+   +  N  R A+ +L         P++A  Y           
Sbjct: 410 RKA----------IAKAYPDEVWNIYRLADDLLIT-----QQPQLAEDY----------- 443

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                +L +            +   L +    +A         I   +  
Sbjct: 444 ---FNQLNQRRPNDPSRRYAYA---LYLNKTGRAQQALNTLKTIPLSQRS 487


>gi|323527669|ref|YP_004229822.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323384671|gb|ADX56762.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 602

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 68/203 (33%), Gaps = 15/203 (7%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             + + G L++A     + L + P            +    + + A T ++Q  K+    
Sbjct: 28  LHAHQAGRLDTADSLYREILALDPANARALHYFGVLHYQRGQHATAATLMSQALKH---- 83

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R+ A     R L  A  G +  +     ++L+L  +   A      +L +Q     A  
Sbjct: 84  DRHDAACWSNRGLAAAALGRLDEATICYDQALQLQPDFADARNNFGVALQAQGALDDAIE 143

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVESLVIVSKI 334
                   NP    A +  HL     +GKL R    L        ++  S E+       
Sbjct: 144 QYRLAIASNP----ALVDAHLNLGTALGKLGRFAEALACYRDALRLDPTSAEAHFNAGNA 199

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
               G  + A A    A+ + P 
Sbjct: 200 HNAQGEHEAAVASFERALALRPD 222



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 71/244 (29%), Gaps = 21/244 (8%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--A 187
           A    + + A      +L +      A++       + G   +A    ++AL       A
Sbjct: 30  AHQAGRLDTADSLYREILALDPANARALHYFGVLHYQRGQHATAATLMSQALKHDRHDAA 89

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W    +            A    +Q  +   ++   R    +A   +         +  
Sbjct: 90  CWSNRGL--AAAALGRLDEATICYDQALQLQPDFADARNNFGVALQAQ--------GALD 139

Query: 248 DAIESLKLC----DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYT 300
           DAIE  +L        + A +    +L    +  +A        +++P    A       
Sbjct: 140 DAIEQYRLAIASNPALVDAHLNLGTALGKLGRFAEALACYRDALRLDPTSAEAHFNAGNA 199

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK--AMLAMKIAPRK 358
           H         +    R   +  +  E+ V +     + G    A A     +A+K  P  
Sbjct: 200 HNAQGEHEAAVASFERALALRPDYAEAHVNLGSAIGKRGDYAGAEAHYRRAVALKANPTN 259

Query: 359 EIFL 362
            + L
Sbjct: 260 LVCL 263



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 47/176 (26%), Gaps = 5/176 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            ++  A       L++  T   A ++        G+  +A     +AL + PD       
Sbjct: 170 GRFAEALACYRDALRLDPTSAEAHFNAGNAHNAQGEHEAAVASFERALALRPDYAEAHVN 229

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +++ A     +             +     +    D+ +         E+L
Sbjct: 230 LGSAIGKRGDYAGAEAHYRRAVALKANPTNLVCLGGSLGAQGRLDEEE-----KFYREAL 284

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
                   A    A  L+ +    +        W+ + +  +A           + 
Sbjct: 285 AQDPGYADAHQNLAWLLLKRGDYTEGWAEFALRWRKSDYDALAVAGVAEWRGEPLD 340


>gi|194390796|dbj|BAG62157.1| unnamed protein product [Homo sapiens]
          Length = 472

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     H +I   Y          + K    +  + +  +     + ++      I
Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
             A A    A +       +  +LA +       E+A 
Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354


>gi|149925768|ref|ZP_01914032.1| hypothetical protein LMED105_06072 [Limnobacter sp. MED105]
 gi|149825885|gb|EDM85093.1| hypothetical protein LMED105_06072 [Limnobacter sp. MED105]
          Length = 592

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 94/299 (31%), Gaps = 68/299 (22%)

Query: 88  LYTGLMSIAAHNIPLARKMHS------YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
           L TG  ++ A     A++  S                + L  LL  +IA        A  
Sbjct: 19  LTTGCATVPADQGEPAQQQMSDEQKAYEARVADMVKQDPLFALLTAEIASQRGDTYSATL 78

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
                 +     E A  ++   S   G L+ A   A    ++SP     + +++   +  
Sbjct: 79  AYTEAAKQQRNPELAKRAVEI-SLAEGQLDLALNAAQVWSELSPGDKQASRSIMLLQLGT 137

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
                A+  L             +A L   ++ E A+ G   +S                
Sbjct: 138 NRVDEAMPAL-------------KAFLADVQAAETANPGLGGSSTEKV------------ 172

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
                            A  +L++I      P+    Y   +             L   N
Sbjct: 173 -----------------ALDMLQRI------PDKNKAYQTGIE------------LFGNN 197

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQANSHNTDKIL 379
            + +E+  +++++A       QA       ++ +P++  ++L+AQ +E+ + +    + 
Sbjct: 198 ADDLETQTLLAQLANNSELYPQAVGHMENVLRKSPQERFYVLMAQFMEKRDGNLDAAMQ 256


>gi|83644566|ref|YP_433001.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83632609|gb|ABC28576.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 592

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 77/211 (36%), Gaps = 23/211 (10%)

Query: 127 VQIALA---ERQYNIAHEKLEMMLQIPATREFAV----YSLYFESCRIGDLNSAQRYATK 179
            + A       + + A        +   ++   +     +L  E   + DL++A +++ +
Sbjct: 378 ARSAYLLIRSGRQSEAEAAFTEARENLPSQASQLWELQINLMLE---LDDLDAALKFSNQ 434

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A++  P+       ++    + K+    +  +    ++    + + A+ L A     AD+
Sbjct: 435 AVEEYPEDL----QLLYARAMLKDRMGLLQGMEDDLRHIIALDPDNAVALNALGYTLADR 490

Query: 240 GD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN- 297
            +    +Y+   ++L+L   +          L    K  +A   L++ +   P PE+A+ 
Sbjct: 491 TERTQEAYNLINKALELDPGNPAILDSMGWVLFRLGKSGEAVGFLQEAYSKFPDPEVASH 550

Query: 298 ----IYTHLLSENTVGKLKRALRLEEINKES 324
               +++    ++     +    L     + 
Sbjct: 551 LGEVLWSLGRQDDAKNIWR--EAL-NTKPDH 578



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 94/321 (29%), Gaps = 45/321 (14%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV- 157
           +  LA    +       F    L+ LL  +IA    Q ++  +    + +   TR+  V 
Sbjct: 49  DTELAPAPDAQSPYPQQFSRSTLLDLLTAEIAGQRGQVDMLLQNYLKVAR--ETRDIGVI 106

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-- 215
                 +  I D  +         ++ PD     +    Q +  K++  A++ + Q    
Sbjct: 107 RRALNAAQYIKDDAAMTEMTLLWTEVEPDNVDAHQLAAFQLIKQKQYPEALSHMEQVLEL 166

Query: 216 ----------------------------KNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                                       K   E +     L+   ++     G   A+  
Sbjct: 167 EGPTTFDRLAVHAKNLTDEEKKELLNLYKKILERHPENGELMYGYAVLQEINGMEEAALA 226

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTH--L 302
                LK   ++       A+ L S      +   L+K +    HP+   +  +Y    +
Sbjct: 227 STDPLLKTSPDNPAVIALRARLLKSVKGVDVSLAYLKKQYAK--HPDEVQVGALYARTQI 284

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE 359
            + N          L      +    +  + ++LE   I +A       +K         
Sbjct: 285 EAHNFDAAQSIYKELMNRFPNTPHLKLSYALVSLENQHIQEARKHLEELVKQGQHLNEAH 344

Query: 360 IFLLLAQIEQANSHNTDKILY 380
            +  LA+I        D I +
Sbjct: 345 FY--LARIADQEDRVEDAIQH 363


>gi|332526321|ref|ZP_08402449.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
 gi|332110459|gb|EGJ10782.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
          Length = 925

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 81/270 (30%), Gaps = 10/270 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             +   + +    +     + L +LL  +I         A        ++      AV  
Sbjct: 452 GQVDAALAATGRLEKKMQGQPLPHLLRGRILGQRGDAPGARAAYTRAAELDPAYFPAVAG 511

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L            A +      +  P       A+          + A   +      A 
Sbjct: 512 LAAIDFAENKPQEAIKRFEALREQDPRDYRALLAIADLKQRTG--AGA-AEVGGLLAAAV 568

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           + N   A   +         GD  A+   A E++    + +        + ++    ++A
Sbjct: 569 KANPGEAAPRLVLVEHFLGLGDHKAALTAANEAVAAVPDDVRLLDALGVAQLAVGDTQQA 628

Query: 280 EVILEKIWKVNPH---PE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
                K+    P    P+  +A+ Y  + + +    ++   R  +   E + +   + ++
Sbjct: 629 LATFGKVAAAQPELPGPQMRMADTYVAMKNPDAA--MQALRRALKAAPEHLPAQQRLVQV 686

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           AL     D+A   A    +  PR+    LL
Sbjct: 687 ALASQHYDEALQVAREVGRQRPREAAGPLL 716



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 78/244 (31%), Gaps = 11/244 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              + A       L+       A  +L        D+   +        + P  P     
Sbjct: 215 GDNDGAMAAFRSALEAEPRHLPAYAALVPLLLERSDVEGLRAMVAAMKKVLPQHPDTRYY 274

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             Q  +L  +  RA   + Q  K A    R   +L +A ++E   +G ++ +      ++
Sbjct: 275 DAQVALLDGDVKRARDGVQQLLKLAPTSVR---LLQLAGAIE-FREGRLLLAESFLNRAI 330

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVG 309
           +       A    A++ +   +  KA   ++ +    P P+     A    +L S +   
Sbjct: 331 QQEPRLGTARRLLAQTHLRAGQPAKALQAIKPV-LEGPRPDAPSLAAAAEAYLQSGDMAT 389

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQI 367
             +   R   I+    +    ++   +  G  D   A+        P    ++ L+ A++
Sbjct: 390 AERYFKRAAAIDPRDPKVSTALALTQIAKGQTDDGFAQLEHIATQDPGNYADLALISARL 449

Query: 368 EQAN 371
               
Sbjct: 450 RVGQ 453



 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 87/268 (32%), Gaps = 60/268 (22%)

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R     +L+      GD+ +AQ    KA D+     W   AV+          +A+  
Sbjct: 64  EARFLLGRTLF----ESGDMAAAQIELGKAHDLR----WDDNAVLPLLA------KAMVA 109

Query: 211 LNQKKKNAKEWNRNR-------AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
             + K+ A  + R         A L    +L +A  GD   S     ++L+L   +I A 
Sbjct: 110 RGEAKQVADLYGRFELGDRVAGAELRAQVALAHAALGDSDRSQAAVDQALRLDPKNITAR 169

Query: 264 ICAAKSLISQNKKRK-----------------------------------AEVILEKIWK 288
           +  A+ L      R+                                   A        +
Sbjct: 170 LQEARLLTRTESPRQTLERVDGILADAPGNANAWLLKGNVLRWSLGDNDGAMAAFRSALE 229

Query: 289 VNPH--PEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             P   P  A +   LL  + V  L+     ++++  +  ++    +++AL  G + +A 
Sbjct: 230 AEPRHLPAYAALVPLLLERSDVEGLRAMVAAMKKVLPQHPDTRYYDAQVALLDGDVKRAR 289

Query: 346 AKAMLAMKIAPRK-EIFLLLAQIEQANS 372
                 +K+AP    +  L   IE    
Sbjct: 290 DGVQQLLKLAPTSVRLLQLAGAIEFREG 317



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 87/302 (28%), Gaps = 37/302 (12%)

Query: 91  GLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           G+  +A  +   A        + Q       +         +A +  + A + L   L+ 
Sbjct: 616 GVAQLAVGDTQQALATFGKVAAAQPELPGPQMR---MADTYVAMKNPDAAMQALRRALKA 672

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A   L   +      + A + A +     P          +     K+W  A+ 
Sbjct: 673 APEHLPAQQRLVQVALASQHYDEALQVAREVGRQRPREAAGPLLESEVLSAQKQWPAALA 732

Query: 210 ---FLNQKKKNAKEWNRNRAILLIA--------------------------RSLENADKG 240
                 Q++       R  A+L +A                                D+G
Sbjct: 733 ATRVALQRQPATAVAVRQHALLSLAGRQAEAERFAAAWETEHPKDADFQNHLGGAALDRG 792

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANI 298
               +     + + L  N  +A    A  ++ Q K   A  + E+  ++ P     +  +
Sbjct: 793 QFAQAEARFRKVIALRPNDAVAHNNVAWLMVRQGKPG-AVAVAERALQLAPGNASVLDTL 851

Query: 299 YTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              L ++  + + ++          E     + ++++ +  G    A A+     K+ P 
Sbjct: 852 AGALAADKQLPRAVQTQREAVAKAPEVPNYRLGLARLLMANGDKAAARAELESLAKLGPS 911

Query: 358 KE 359
             
Sbjct: 912 FR 913


>gi|307197750|gb|EFN78899.1| RNA polymerase-associated protein CTR9-like protein [Harpegnathos
           saltator]
          Length = 1015

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 87/267 (32%), Gaps = 13/267 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +   +    V L      +       A    E  L
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224

Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           Q+      A+  L          +   +  +  +KA  I    P V   +   +   K++
Sbjct: 225 QLDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263
           ++ +  L     +  E    RA      +     +GD   ++    ++ +      ++  
Sbjct: 285 NK-VQHLALHAFHNTENESMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317
               +  + +     A    EK+ K  P        + ++Y +  S++     K    ++
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344
            E   + VE+ + +++I LE   ++ A
Sbjct: 404 TEQFPDDVEAWIELAQI-LEQSDLNAA 429



 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 86/249 (34%), Gaps = 31/249 (12%)

Query: 137 NIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           + A +  + +L+  P   +  +  L   +   G +  A  +   AL I+ + P     + 
Sbjct: 513 DRAEKLYKDILKEHPNYMDCYLR-LGCMARDKGQIYEASDWFKDALRINNEHPDAWSLLG 571

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA---------RSLENA-DKGDMIAS 245
             ++   EW        +  KN        +++ +             +   +K     +
Sbjct: 572 NLHLAKMEWGPGQKKFERILKNPSTSTDAYSLIALGNIWLQTLHQSGKDKEREKRHQDRA 631

Query: 246 YHDAIESLKLCDNSIMA-----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEI 295
                + L+    +I A     ++ A K  +++ +      R+A      +W       I
Sbjct: 632 LAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATAEFCDVWLN-----I 686

Query: 296 ANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           A+IY       +  ++      +    +   VE L  + +   + G + +A    + A +
Sbjct: 687 AHIYVEQKQFVSAIQMYENCLRKFYRYH--HVEVLQYLGRAYFKAGKLKEAKLTLLKARR 744

Query: 354 IAPRKEIFL 362
           +AP+  + L
Sbjct: 745 VAPQDTVLL 753


>gi|299135312|ref|ZP_07028503.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
 gi|298590289|gb|EFI50493.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
          Length = 700

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 80/235 (34%), Gaps = 12/235 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A       L+I      ++ +L       G     +  A +A+ + P +  V   
Sbjct: 21  GDLANADRYFRATLKIVPAHGPSLANLAAVLVHQGHFEEGRERAEQAVAVGPPSADVLNT 80

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +         +S AI   +   K   + +   A L    +L    + D   + +D +  L
Sbjct: 81  LGFALGRLGRYSEAIKVTDDALK--IDPSSIDAQLTRGNALRRLCRFDEALAVYDRL--L 136

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS------ENT 307
                S  A++  A +L    +  +A  I E++   N  P++A+ +  L +      ++ 
Sbjct: 137 SADPQSEDAALGRATALAQAQRFDEAFPIFERLLSQN--PKLASAWAGLGNALVSSHKSY 194

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
              +    R  EI+    ++        L M   ++A      A+ + P +    
Sbjct: 195 AEAVSAFDRAIEISPGLADAWAGRGGAFLAMKDFERALPNFERALSLDPHQRFLR 249



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 16/218 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GDL +A RY    L I P        +    V    +        Q           
Sbjct: 18  LDRGDLANADRYFRATLKIVPAHGPSLANLAAVLVHQGHFEEGRERAEQAVAVGPP--SA 75

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +  +  +L     G    +     ++LK+  +SI A +    +L    +  +A  + +
Sbjct: 76  DVLNTLGFALGRL--GRYSEAIKVTDDALKIDPSSIDAQLTRGNALRRLCRFDEALAVYD 133

Query: 285 KIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS- 340
           ++   +P  E   +        ++          RL   N +   +   +    +     
Sbjct: 134 RLLSADPQSEDAALGRATALAQAQRFDEAFPIFERLLSQNPKLASAWAGLGNALVSSHKS 193

Query: 341 IDQAHAKAMLAMKIAP--------RKEIFLLLAQIEQA 370
             +A +    A++I+P        R   FL +   E+A
Sbjct: 194 YAEAVSAFDRAIEISPGLADAWAGRGGAFLAMKDFERA 231


>gi|221235845|ref|YP_002518282.1| tetratricopeptide repeat (TPR) protein [Caulobacter crescentus
           NA1000]
 gi|220965018|gb|ACL96374.1| tetratricopeptide repeat (TPR) protein [Caulobacter crescentus
           NA1000]
          Length = 549

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 77/275 (28%), Gaps = 17/275 (6%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEK-LEMMLQIPATREF 155
           +   A       +            LL    A  +   + + A       + + P  R  
Sbjct: 66  DNGRAADALRLTTGPVALPQAS-AGLLMAHAAALKALGRTDEALTFNRRAVARAPGDRF- 123

Query: 156 AVYSLYFESCRIGDL---NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              S Y  +  +GDL   + A+  A K + +  D P V   + +       +  A     
Sbjct: 124 ---SWYNLAATLGDLALDDEAEGAARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFV 180

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +          +  + L    L     G    +      ++      +      +  L  
Sbjct: 181 RALAARP---SDATVHLNLAQLRWMRSGRSDEALAPLDAAIARHPADVTLRTIRSNVLTF 237

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINKESVESLV 329
                 A+  LE      P      I     +     +   L  A     +   ++ES  
Sbjct: 238 AGDHAGADATLEDALTRAPGDLAVRIAAARAAGAVGDRARMLAHAREAARLAPGALESQT 297

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           ++ +  L  G  D A   A   +  AP  +  L+L
Sbjct: 298 VLCEALLAAGQADVAARTAEALVAAAPDDQYALVL 332


>gi|255948108|ref|XP_002564821.1| Pc22g08050 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591838|emb|CAP98093.1| Pc22g08050 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 937

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 40/245 (16%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SIA  N   AR +++Y      F N   ++L     A  ER +       +++ +     
Sbjct: 548 SIARGNYETARAIYAYA--LRVFVNRRSIWL---AAADLERNHGTKEALWQVLEKAVEAC 602

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P + E  +  L  E  + GD++ A+R   +A + +P+   +  A V+    AK+  +A  
Sbjct: 603 PQSEELWLL-LAKEKWQSGDIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAKKTDQARE 661

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240
            L   ++ A         +   R L N D                               
Sbjct: 662 LLATARREAGTDRVWTKSVAFERQLGNIDDALDLVNQGLQLFPKADKLWMIKGQIYEAQN 721

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
            +  +        + C  S+   + A++         +A  +L++     P +PE+    
Sbjct: 722 KLPQAREAYGTGTRACPKSVALWLLASRLEEKAGAVVRARSVLDRARLAVPKNPELWTES 781

Query: 300 THLLS 304
             +  
Sbjct: 782 VRVER 786



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 7/150 (4%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  +  +G+   +      +L++  N     + AA    +   K     +LEK  +  P 
Sbjct: 545 AKASIARGNYETARAIYAYALRVFVNRRSIWLAAADLERNHGTKEALWQVLEKAVEACPQ 604

Query: 293 PEIANIYTHLLSE----NTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAK 347
            E   ++  L  E      +   +R L      N  + +  +   K+  +    DQA   
Sbjct: 605 SE--ELWLLLAKEKWQSGDIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAKKTDQAREL 662

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
              A + A    ++      E+   +  D 
Sbjct: 663 LATARREAGTDRVWTKSVAFERQLGNIDDA 692


>gi|116754673|ref|YP_843791.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
 gi|116666124|gb|ABK15151.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila PT]
          Length = 1261

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 101/303 (33%), Gaps = 61/303 (20%)

Query: 125  LEVQIALAERQYNIAHEKLEM---MLQ----IPATREFAVYSLYFESCRIGDLNSAQ--- 174
            L  + A+    +  A E       M++      +           E  R GD+  A    
Sbjct: 833  LAAECAMRAGDHEAATE-FRANIDMVRSCRGEASVDIDGYLKKLEEIERAGDVEMAAEMH 891

Query: 175  -----RYA-----TKALDISPDAPWVTEAVVQQYVLA-------------KEWSRAITFL 211
                  YA      +ALD    +  + E    +Y  A              EWS A   L
Sbjct: 892  GILANAYADIFRWEEALDHYQKSLELFERTGDRYSAAETMFNMALIYRDRGEWSIAEDLL 951

Query: 212  NQ------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            ++        K +  ++ +R  L + + +  AD  + I S     ES+    +   A + 
Sbjct: 952  SRSMSEFRALKASPCYSMSRLNLGLLKEIRGADPEEDILSAITTFESIGAIPDLCEAYLA 1011

Query: 266  AAKSLISQNKKRKA--------EVILEKIW---KVNPHPEIANIYTHLLSENTVGKLKRA 314
             A+  +++ +  +A         +IL+  +   K+  + E  + Y            ++A
Sbjct: 1012 MARVKLNRGEMSEARFYLSEAETLILKTGYDSMKIRLYIEWGDFYLSQAPFEARSSYQKA 1071

Query: 315  LRLEE---INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-------EIFLLL 364
            L L     + ++   +L  +   +L  G  D+A      A+ +             + L+
Sbjct: 1072 LALARKMGLTRDEGVALRSLGAASLNAGDYDEAEEHLQKALTLFKSINSMYDLLSTYALM 1131

Query: 365  AQI 367
            A +
Sbjct: 1132 ATL 1134


>gi|262305039|gb|ACY45112.1| acetylglucosaminyl-transferase [Scolopendra polymorpha]
          Length = 290

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALQLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   Q    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVAEAEECYNTALQLCPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A E     LQ+  T   ++ +L       G    A R   KAL++ P+
Sbjct: 27  ANALKEKGQVAEAEECYNTALQLCPTHADSLNNLANIKREQGFTEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 XIVCDWTDYESRMKKLVAIVADQLDKNRLPSVHPHH 236


>gi|187251561|ref|YP_001876043.1| Tetratricopeptide domain-containing protein [Elusimicrobium minutum
           Pei191]
 gi|186971721|gb|ACC98706.1| Tetratricopeptide repeat protein [Elusimicrobium minutum Pei191]
          Length = 511

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 9/189 (4%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A++Y  K L   P +    + +       K ++ A+ +L          ++     L+  
Sbjct: 248 ARKYFEKILSYDPSSILANQFMAAISEDEKNYAAALKYLQAAGDYKTNASK-----LLQA 302

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           S   A  G+   +      + K+ D S+      A SL    K ++A  I ++I    P 
Sbjct: 303 SFYAARMGNAEEASSILDNAYKVSDKSVEVGYFYAVSLQDLGKHKEAVKIFKEILSQTPQ 362

Query: 293 PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVIVSKIALEM-GSIDQAHAKA 348
            E A +   +  +   +     K+   +   N  + E+L  ++   LE    + +A    
Sbjct: 363 YEKARMMYGVSLDALGDNAELEKQMRIVVGQNPANSEALNSLAYALLEQNKKLKEAKKHI 422

Query: 349 MLAMKIAPR 357
             ++++ P 
Sbjct: 423 DRSLQLKPD 431



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 73/254 (28%), Gaps = 54/254 (21%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A  +  K L   P++ ++   ++Q  + A +               +         L
Sbjct: 43  YDKALDHFEKNLKEFPESEFLKTLILQTAIAAGKEDNYEEI------AKEVSQYKDKNSL 96

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN--KKRKAEVILEKIW 287
           IA +  +  KG +  +      +L L       +   A+ L   N     +A   LE+  
Sbjct: 97  IASAAYSWSKGHLKDALSYYESALALDPE---NTAILAQYLTLLNGMDSERAVAFLEE-- 151

Query: 288 KVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSK-------- 333
                PE+A +        +L    T   L    +  + N    E+ +  ++        
Sbjct: 152 YAEKVPELAAVIFQEAGNVNLKRGRTEDALTMYFKATKANPRYAEAYISRAEIYQKQSKL 211

Query: 334 --------------------------IALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQ 366
                                     + + + +I +A       +   P   +    +A 
Sbjct: 212 QESLKEYKKLEDMGLADTYVYLRIGTLHVLLKNIPEARKYFEKILSYDPSSILANQFMAA 271

Query: 367 IEQANSHNTDKILY 380
           I +   +    + Y
Sbjct: 272 ISEDEKNYAAALKY 285


>gi|16124374|ref|NP_418938.1| TPR domain-containing protein [Caulobacter crescentus CB15]
 gi|221233057|ref|YP_002515493.1| porphyrin biosynthesis protein [Caulobacter crescentus NA1000]
 gi|13421226|gb|AAK22106.1| TPR domain protein [Caulobacter crescentus CB15]
 gi|220962229|gb|ACL93585.1| porphyrin biosynthesis protein [Caulobacter crescentus NA1000]
          Length = 747

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 83/254 (32%), Gaps = 25/254 (9%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L +   A    Q   A      +L        A ++L   +  +G   +   +   AL+I
Sbjct: 9   LAQAIAAHRSGQLQDAERLYRAILDAAPGHADANHNLGVLAVGVGKPQAGLSFLKAALEI 68

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P       + +   + A   + A   L Q K+         A+  + + L+ A      
Sbjct: 69  NPAQGQFWVSYIDALIAAGLPAAARDHLEQAKRRGLTG---DAVERLEKRLDPA--SQPP 123

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IANI--Y 299
            +  D++ +     N   A   A    +S         +L  ++ V    E  +A++   
Sbjct: 124 QALLDSVVAQYRSGNLAAAESQAHALTLSFPNHELGWKVLGAVFSVTGRSEESLASMRQA 183

Query: 300 THLLSENTVG---------KLKRALRLE-------EINKESVESLVIVSKIALEMGSIDQ 343
             L  ++            KLKRA   E        +  +  +  + +    +++    +
Sbjct: 184 LSLNPQDAETFKNLAILLLKLKRAEEAEAACRSALALAPDYPQVHLTLGNALIDLARAAE 243

Query: 344 AHAKAMLAMKIAPR 357
           A      A+++ P 
Sbjct: 244 AEESFRQAIRLKPD 257



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 72/253 (28%), Gaps = 18/253 (7%)

Query: 88  LYTGLMSIAAHNIPLARKM-------HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
           +  GL + A  ++  A++             +           L  V           A 
Sbjct: 84  IAAGLPAAARDHLEQAKRRGLTGDAVERLEKRLDPASQPPQALLDSVVAQYRSGNLAAAE 143

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            +   +       E     L       G    +     +AL ++P      + +    + 
Sbjct: 144 SQAHALTLSFPNHELGWKVLGAVFSVTGRSEESLASMRQALSLNPQDAETFKNLAILLLK 203

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            K    A          A ++   +  L +  +L   D      +     ++++L  +  
Sbjct: 204 LKRAEEAEAACRSALALAPDYP--QVHLTLGNAL--IDLARAAEAEESFRQAIRLKPDYS 259

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRAL 315
            A      +L    +  +AE    +  ++NP     H  + +++  L          RA 
Sbjct: 260 EAHCNLGCALKLSGRLTEAETCFRRAIQLNPADAQAHNNLGDVFKDLGRFADAEAFYRAA 319

Query: 316 RLEEINKESVESL 328
               +  E +E+ 
Sbjct: 320 --IGLKPEYLEAH 330


>gi|302343834|ref|YP_003808363.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075]
 gi|301640447|gb|ADK85769.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075]
          Length = 503

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 7/169 (4%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L  ++L +  K D   +     E  +       A       L+   +  +A+ +L+    
Sbjct: 296 LYGQALLSMRKRDYDQALRILDEMERKWPGDQDALKERGLCLVRVGRLDEAKSVLDAALT 355

Query: 289 VNP-HPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            +P +P+I       Y H   ++         R+ +   E++E+  ++       G++ +
Sbjct: 356 KDPGNPQILFAIGEAYAHSGQDDVAA--SAFRRVVQAQPENLEARRMLGTSLGRAGNLGE 413

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           A  +  L  K    + +     +   +   +  ++    Q AL+ + DP
Sbjct: 414 AALQLGLTFKQENNERLARYHLERAVSQLADRPELRQEAQKALNELNDP 462


>gi|297537340|ref|YP_003673109.1| hypothetical protein M301_0144 [Methylotenera sp. 301]
 gi|297256687|gb|ADI28532.1| TPR repeat-containing protein [Methylotenera sp. 301]
          Length = 510

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 5/158 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL    A    +   A ++   +LQ       A+  +   + R G    AQ +  K L+I
Sbjct: 328 LLAAYQAFMRGEDANAQQQYRQVLQRDVRNVDALLGMAAIAQRQGRDADAQGWYQKVLEI 387

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P       A+V       + + A      + K+        A L  A     A++    
Sbjct: 388 EPRNSIAQTAIVSPQANT-DAAGA----ESRIKSMIAQQPEGANLHAALGNLYAEQSQWP 442

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           ++      + +L  N+   +   A SL    K   A  
Sbjct: 443 SAQEAYFNASRLAPNNADYAFNLAISLDQMGKSSLALK 480


>gi|163748943|ref|ZP_02156194.1| hypothetical protein KT99_12594 [Shewanella benthica KT99]
 gi|161331319|gb|EDQ02207.1| hypothetical protein KT99_12594 [Shewanella benthica KT99]
          Length = 386

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 96/310 (30%), Gaps = 44/310 (14%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + +    + ++  P      R+ A+  L  +    G  + A+      +     +  
Sbjct: 83  GEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVKQDDHSED 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y + K+W +AI  +   K+K  +    N A      + E  D    +     
Sbjct: 143 AETHLIDIYQVTKDWQKAINIIKSLKRKRQQSLKHNTAHFYCELANEQTDVAPQLKLLQA 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-T 307
           A+   K   +   A +  A+  +  ++  K + +L K         + +    L  +  +
Sbjct: 203 AL---KQDSDCGRALLTLAEKYLDSHEHAKCKALLAK---------LLDADIELFPDALS 250

Query: 308 VGK--------LKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + +        L     L     ++       + ++K  +E G   +A    +  +   P
Sbjct: 251 IARQVFHDSHDLAGYSDLLRQALQNGAGASVAITLAKNMIEQGETQEAEQLVLDGLYRHP 310

Query: 357 RKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMPD------PLWIS-DDGYLSSV--WL 406
             + F  L+            +        L  + D      P +     G+ S    W 
Sbjct: 311 TMKSFQHLMKM--HVQQAEDGQAKESLTM-LEKLVDQQIKFRPGYRCSGCGFPSHRLYWH 367

Query: 407 PLSPISKTLC 416
              P  K+  
Sbjct: 368 --CPSCKSWG 375


>gi|147919289|ref|YP_686975.1| hypothetical protein RCIX2597 [uncultured methanogenic archaeon
           RC-I]
 gi|110622371|emb|CAJ37649.1| hypothetical protein RCIX2597 [uncultured methanogenic archaeon
           RC-I]
          Length = 292

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 11/135 (8%)

Query: 133 ERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-- 187
             +Y+ A E  E    ++   A     + SL     R G+   A    ++AL +S D   
Sbjct: 89  NGKYDEAIEAFEDAMKLVSTEADTISILNSLGNAYLRAGNTQRALELYSEALQLSYDHDL 148

Query: 188 -PWVTEAVVQQYVLA---KEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLENADKGD 241
             W    +    V      ++  ++ F         A +  R   I L   +    + G 
Sbjct: 149 DEWTQITLSNIGVAHVNMGDYKGSLKFFEDALDLARALDDARGERICLNNLAGVLNNMGQ 208

Query: 242 MIASYHDAIESLKLC 256
              +    +E+LK  
Sbjct: 209 REDALELFMEALKKA 223


>gi|17545117|ref|NP_518519.1| hypothetical protein RSc0398 [Ralstonia solanacearum GMI1000]
 gi|17427408|emb|CAD13926.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 642

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 4/190 (2%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A   A   ++++P +    +      V   +WS     L  +        R  AIL 
Sbjct: 139 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 198

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           + + +      D   +                  +  A++ +       A   L+   K+
Sbjct: 199 LQQQMSK--SNDPAGAVSALQRLTTHDAQRPETHLALARAKVVAKDNTGALSELDTALKL 256

Query: 290 NP-HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            P + + A +   L +++     +       +    S++  + ++++ L     DQA A+
Sbjct: 257 RPGYEDAAILAAELRADSDPDAAISGLRTFLKAAPASIDGHLALARMYLVRNQNDQARAE 316

Query: 348 AMLAMKIAPR 357
                KIAP 
Sbjct: 317 FEALRKIAPT 326



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +   A   ++L   S+ A       +++  +  + E +L+         + A     
Sbjct: 139 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 198

Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           L      S +  G +    RL   + +  E+ + +++  +       A ++   A+K+ P
Sbjct: 199 LQQQMSKSNDPAGAVSALQRLTTHDAQRPETHLALARAKVVAKDNTGALSELDTALKLRP 258

Query: 357 RKEIFLLLAQIEQANSHNTDKILY 380
             E   +LA   +A+S     I  
Sbjct: 259 GYEDAAILAAELRADSDPDAAISG 282


>gi|319778147|ref|YP_004134577.1| tetratricopeptide tpr_1 repeat-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171866|gb|ADV15403.1| Tetratricopeptide TPR_1 repeat-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 580

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 88/307 (28%), Gaps = 8/307 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQI 149
           G+ +  A     A  +          + + LV L     A         A E     L +
Sbjct: 36  GVKARQAQRFEAAAGLFRRALALRPDNADALVQL---GFAELGRNNLPAAREAFSKALSL 92

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   A + +     R G+ ++A   A +     PD    +  V       +  S    
Sbjct: 93  APTYRDASFGMAEVEFRSGNPDAALPLAEEVSRAEPDNADASTLVANIRKAQRAGSSKAK 152

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               +K          A L+      +   G +  + +    +L+L   +    +     
Sbjct: 153 PATARKIPRPPRPDPVAGLM-EEGRRSRAAGQLPEAENAYRRALRLAPKNTDILVAIGLV 211

Query: 270 LISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
             SQ K  +A    ++   + P      +  +   +   +          +     ++VE
Sbjct: 212 AGSQQKFDQAGQFFDQALAIRPRLLGARLGKVRLAIWQGDVPRARAMIDDVLGTAPDNVE 271

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           ++ + ++I+L      +A       + +       L+     +    +        + AL
Sbjct: 272 AMALDARISLLEQDYTRAEQSFQRVLAVDSHNAEALVGIGDLRRARGDDFAAREAYRQAL 331

Query: 387 HAMPDPL 393
              P   
Sbjct: 332 AIEPGSA 338


>gi|195081785|ref|XP_001997359.1| GH23803 [Drosophila grimshawi]
 gi|193905926|gb|EDW04793.1| GH23803 [Drosophila grimshawi]
          Length = 900

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 538 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 595

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 596 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 655

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          +      +LK C  SI   I +A     +
Sbjct: 656 LLAEAVEVFPEFPKLWMMKGQIEEQQRRTDDAAATYTLALKKCPTSIPLWILSANLEERK 715

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               KA  ILE+    N  P+IA ++   +       LK
Sbjct: 716 GVLTKARSILERGRLRN--PKIAVLWMEAIRVELRAGLK 752



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 70/217 (32%), Gaps = 16/217 (7%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              W+ +A          +  A        +            +  R+           S
Sbjct: 499 KQTWIDDA--DFCAKENAFECARAVYAHALQMFPSKKS-----IWLRAAYFEKNHGTRES 551

Query: 246 YHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLL 303
               ++ ++  C  S +  +  AKS         A  IL   ++ NP+  +I      L 
Sbjct: 552 LEALLQRAVAHCPKSEILWLMGAKSKWMAGDVPAARGILSLAFQANPNSEDIWLAAVKLE 611

Query: 304 SENTV-GKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           SEN+   + +R   L +    +    V++  +++   +   D+A      A+++ P    
Sbjct: 612 SENSEYERARRL--LAKARGSAPTPRVMMKSARLEWALERFDEALRLLAEAVEVFPEFPK 669

Query: 361 FLLL-AQIEQANSH-NTDKILYWTQSALHAMPDPLWI 395
             ++  QIE+     +     Y           PLWI
Sbjct: 670 LWMMKGQIEEQQRRTDDAAATYTLALKKCPTSIPLWI 706



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 247 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 305

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 306 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 355

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 356 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 408

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 409 RKVLNKARENIPTDRQIWTTAAKLEEANGN 438


>gi|152975043|ref|YP_001374560.1| TPR repeat-containing protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023795|gb|ABS21565.1| Tetratricopeptide TPR_2 repeat protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 420

 Score = 46.9 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 96/265 (36%), Gaps = 27/265 (10%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163
              +  +     E ++     ++  ++ +   A +  + +L           A+  L   
Sbjct: 121 QKLLKAKEIMPEEPVIIFGLAELYSSKGEEKKAIQYYQSLLAEHKVMGGVIIALR-LAET 179

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              +G+   A  Y  + L+   D   +       Y   +E+ RAI+      +  KE + 
Sbjct: 180 LSAVGNWEEAIPYYEEGLEEQKDIHSLFGYAFTLY-QGEEYPRAISVW----QELKELDP 234

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +  +     +G +  SY    + +K+ + S+   +  A       K  +AE +L
Sbjct: 235 EYASLYMYLAKCYEKEGMLQESYETLHDGIKVDELSVPLYVELANIAAKLGKMAEAEEVL 294

Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +K  +++P H  +  I  Y ++L        ++   L  + + + ES    +++      
Sbjct: 295 QKALRLDPGH--LGAILKYVYILKGQ-----EKYEELIRVVENARESGEQDAQL-----L 342

Query: 341 IDQAHAKAMLAMKIAP---RKEIFL 362
            D A AK  L M        +  + 
Sbjct: 343 WDLAFAKKQLEMYSDALKHYESAYT 367


>gi|302502632|ref|XP_003013277.1| hypothetical protein ARB_00462 [Arthroderma benhamiae CBS 112371]
 gi|291176840|gb|EFE32637.1| hypothetical protein ARB_00462 [Arthroderma benhamiae CBS 112371]
          Length = 727

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 79/242 (32%), Gaps = 24/242 (9%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183
           ++Y  A    +  L   P ++  A+ S Y    +  GD         +  +    + +  
Sbjct: 306 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 365

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237
           +P    +   + +    + +  R      +        +  + W R   + +     E  
Sbjct: 366 NPKNYDLWFDLTRLEETSGDVDRIRDTYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 425

Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           + GD   +     E LKL            +  A+  I Q     A   L +   + P  
Sbjct: 426 ENGDAERARQIYTECLKLIPHKKFTFAKIWLLKAEFEIRQLDLVLARKTLGQAIGMCPKD 485

Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           ++   Y  +     E +  + K   +  + N    ES +  +++   +  +++A A   L
Sbjct: 486 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 544

Query: 351 AM 352
            +
Sbjct: 545 GI 546


>gi|227818389|ref|YP_002822360.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|227337388|gb|ACP21607.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 594

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 86/280 (30%), Gaps = 19/280 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA-ERQYNIAHEKLEMMLQIP 150
           L+   +     A +    ++      ++    +++       E        +    L+  
Sbjct: 285 LIDATSGGHLWAERFDRDLTDIFAVQDDVTQQIVDALALNLREGDQQRLAAEQTESLEAY 344

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKEWS--- 205
                    ++           A+    +A+++       +   AV        +WS   
Sbjct: 345 DCFLRGREHMWR--LTREQNTQARELLQRAIELDAKFVPAYAFLAVTHGLAYINQWSQSP 402

Query: 206 -RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            ++     +    A   +        A  +          +  +A   + L  N +    
Sbjct: 403 SKSRELAIEAATRAVALDDQYPYAHWALGVVKLHLRQHDVAIAEAERVIALAPNLVEGYE 462

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-PEI-----ANIYTHL-LSENTVGKLKRALRL 317
               +L    +  +A    E+   +NP+ P++     A     L   E  V  LKR  RL
Sbjct: 463 NLGNALHYAGRSAEALAYFERAMALNPYYPDLFLHFYAQAMFQLGRYEEAVVILKR--RL 520

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              N ++  S V+++     +G  ++A  + +   +I P 
Sbjct: 521 VR-NPDTDVSRVLLAASYGHLGRFEEARGEWVEVFRINPD 559


>gi|171913931|ref|ZP_02929401.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
          Length = 468

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 7/190 (3%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A +    AL I P          +      ++ +A+   N     + E +       
Sbjct: 146 WDLALQDFDNALKIQPRYAHALAGRGEARRNLGQYEKALEDFNA----SIELDPKNPGAY 201

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             R L  A  G    +  D  +++ L  N   A      +  S  + + A+    +  K+
Sbjct: 202 NNRGLTQASLGKREEAQADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKI 261

Query: 290 NP--HPEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +P   P +       +   +    +     +  +  ++V +    +    + G  ++A A
Sbjct: 262 DPAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALA 321

Query: 347 KAMLAMKIAP 356
               A+K+AP
Sbjct: 322 DLDTAIKLAP 331



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            QY  A E     +++      A     L   S   G    AQ    KA+D+ P+     
Sbjct: 178 GQYEKALEDFNASIELDPKNPGAYNNRGLTQASL--GKREEAQADFNKAIDLLPNFAPAY 235

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                 Y        A T  NQ  K    +       L  R++    +G +  +  D  E
Sbjct: 236 NNRGFNYASLGRTKDAQTDYNQALKIDPAYTP----ALNNRAMLRVAEGSLKDAIADFSE 291

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
            ++L  +++ A    A +     +  KA   L+   K+ P     H  +A  Y +    +
Sbjct: 292 IIRLRPDNVHAYNNRAAAYDKAGQPEKALADLDTAIKLAPQDGQTHKNLAIAYVNRGRWD 351

Query: 307 TVGKLKRALRLEEINKESVES 327
               LK       +  E VE+
Sbjct: 352 EA--LKEFTTASSLLPEDVET 370


>gi|197124020|ref|YP_002135971.1| hypothetical protein AnaeK_3630 [Anaeromyxobacter sp. K]
 gi|196173869|gb|ACG74842.1| protein of unknown function DUF124 [Anaeromyxobacter sp. K]
          Length = 428

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 48/173 (27%), Gaps = 31/173 (17%)

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++ +  +   +     +AR  E   +GD   +      +L+L            ++   
Sbjct: 2   ARRADGGDGVDDELAFHLARGTELLAQGDADRARAALERALELGPKDAKVLALLGQACYR 61

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           Q +   A       W                            RL + N     + V + 
Sbjct: 62  QGQFDDAA----IAW---------------------------QRLVDENPVEPAARVNLG 90

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
              L+    ++A  +  +A+ + P     +    +    S +      W + A
Sbjct: 91  LAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGAREWFRKA 143



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 2/135 (1%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G   +A  +   AR   +          +  V  L  Q    + Q++ A    + ++
Sbjct: 19  LARGTELLAQGDADRAR--AALERALELGPKDAKVLALLGQACYRQGQFDDAAIAWQRLV 76

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                   A  +L     +      A+R    ALD++PD       +    + + + + A
Sbjct: 77  DENPVEPAARVNLGLAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGA 136

Query: 208 ITFLNQKKKNAKEWN 222
             +  +   +     
Sbjct: 137 REWFRKAGSDHMVAR 151


>gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379]
 gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 568

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 13/191 (6%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +   L  E++ A+  L    + A E + + A L  A +      G +  +  +   ++K 
Sbjct: 49  RLASLEGEYALALNCL----REAIEQDPSSAFLYSAMAENKLKIGQVQEALENINRAIKQ 104

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV-----GK 310
             +     + A   + S  K  +A   L    +++P  E  + Y HL    T        
Sbjct: 105 DPSFREPYVMAGVLMASAGKDTEAVGYLRTAIQLDPSKE--DAYLHLAVSLTRMFEYEEA 162

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQ 369
           +     L + N ESV     + +   +M     A      ++++ P      + +A   +
Sbjct: 163 VTTLKSLVKQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYE 222

Query: 370 ANSHNTDKILY 380
           A   +  K + 
Sbjct: 223 A-LGDYTKAIE 232



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 99/334 (29%), Gaps = 70/334 (20%)

Query: 84  GYKALYTGL-------MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAER 134
            Y A    L       ++       LA        ++    +    +L        L   
Sbjct: 34  AYDAYSRALYLYSRSRLASLEGEYALALNC----LREAIEQDPSSAFLYSAMAENKLKIG 89

Query: 135 QYNIAHEKL-EMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           Q   A E +   + Q P+ RE      V  L   +    D   A  Y   A+ + P    
Sbjct: 90  QVQEALENINRAIKQDPSFREPYVMAGV--LM--ASAGKDTE-AVGYLRTAIQLDPSKED 144

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +        E+  A+T L    K   E       L  + S         +  Y DA
Sbjct: 145 AYLHLAVSLTRMFEYEEAVTTLKSLVKQNPESVLGYYYLGRSYS--------QMKLYRDA 196

Query: 250 I----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
           +    +S++L      A+I  A S  +     KA  I                Y  LL E
Sbjct: 197 VGYFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEI----------------YHDLLDE 240

Query: 306 NTV-----GKL-------KRA-LRLEEINKES------VESLVIVSKIALEMGSIDQAHA 346
           +        +L       +R    LE +N+ +       E++  +  I LE+   D+A A
Sbjct: 241 DESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLIHLELEQYDEAIA 300

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
                ++  P      L   +      + D+   
Sbjct: 301 VFNDLLEKDPSAHHVRLYLGVAYEEKGDLDRAKA 334


>gi|297530896|ref|YP_003672171.1| two component transcriptional regulator, winged helix family
           [Geobacillus sp. C56-T3]
 gi|297254148|gb|ADI27594.1| putative two component transcriptional regulator, winged helix
           family [Geobacillus sp. C56-T3]
          Length = 329

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 16/100 (16%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAP-----WVTEAVVQQYVLAKEWSRAIT----FLNQK 214
             R  +   A++   +AL   P  P     W    +         W  AI      L   
Sbjct: 66  KLRKENYRKARKLFEQALRFDPGDPVCRYHWGHLELYD-----GRWKEAIRQFQLVLQST 120

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            K+ + ++  RA+   A +      GD   +     E+ K
Sbjct: 121 SKHLEPYHYIRALCSSAIAYNQL--GDPETALRLLDEAKK 158


>gi|256810816|ref|YP_003128185.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86]
 gi|256794016|gb|ACV24685.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86]
          Length = 318

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 25/247 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +I  + K    +++      + + Y L  Q       ++ A E  E  L I   +   V
Sbjct: 65  GDIQRSTKYLEEIAKD---SKDPITYTLLGQCYELSGNFDKALECYEKSLGIDE-KFALV 120

Query: 158 YSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             ++F+S  +G   + +    Y  K +  SPD                 +  A+  LN+ 
Sbjct: 121 --VFFKSLCVGISDECDKTLTYCDKLIANSPDFVPAYIIKADLLRRLGRYEEALHCLNRA 178

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLIS 272
                +   N    +  ++L     G    S        KL D        +      +S
Sbjct: 179 L----DLKSNDKNAMYLKALILKKMGKYDESLKYYE---KLIDELNITCIEVIREGIYLS 231

Query: 273 --QNKKRKAEVILEKIWKVNPHPEIANIYTHLL----SENTVGKLKRALRLEEINKESVE 326
              NK  +AE  +E   K  P  + +  Y               LK   +  +I     +
Sbjct: 232 FLFNKLDQAEKYIEMGLKSIPG-DASLWYFKGRLYEKQGKAEEALKYYNKALQIMPNHTK 290

Query: 327 SLVIVSK 333
           +L+  ++
Sbjct: 291 ALLAKAR 297


>gi|312966789|ref|ZP_07781007.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
 gi|312288253|gb|EFR16155.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
          Length = 389

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSACVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|225458091|ref|XP_002280691.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 788

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 11/191 (5%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCDNSIM 261
            A        + A+      A LL        +    +G ++++     E+  LC     
Sbjct: 280 EAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGMVMSACEHYREAAILCPTHFR 339

Query: 262 ASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           A      +L    + R A   LE     K    + H ++A+   H + E     +    +
Sbjct: 340 ALKLLGSALFGVGEYRAAVKALEEAIFMKADYADAHCDLASA-LHAMGEGEKA-IPVFQK 397

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
             ++    V++L  +  + ++MG   +A       + + P      L   +    +   +
Sbjct: 398 AIDLKPGHVDALYNLGGLYMDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAE 457

Query: 377 KILYWTQSALH 387
           +     + AL 
Sbjct: 458 EAKKALKEALK 468


>gi|170727983|ref|YP_001762009.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908]
 gi|169813330|gb|ACA87914.1| Tetratricopeptide TPR_2 repeat protein [Shewanella woodyi ATCC
           51908]
          Length = 729

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 4/132 (3%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           +G   L   L  +A      A            + +   + L    I  A  Q + A+  
Sbjct: 563 RGEGRLNLALQHLAIGQWEKAETQLIASIATDPYFDPSYINL--ADIYRATGQTSKANNT 620

Query: 143 LEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            +  +L  P +     Y L     R  D  +A++Y   A  ++P         +      
Sbjct: 621 FKEGLLHNPNSSGL-HYGLGLHLIRAKDYLAAEKYLENAATLAPQNVQYQYVYLVALDHN 679

Query: 202 KEWSRAITFLNQ 213
            + + A+ +L +
Sbjct: 680 GKTTDALDYLKR 691


>gi|301615544|ref|XP_002937238.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 5-like [Xenopus (Silurana) tropicalis]
          Length = 498

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE--AVVQQYVLAKEWS------ 205
              +Y  Y E         A+    KAL + PD P +    A V   +  ++        
Sbjct: 182 LLTLYGKYCE--------RAKECFEKALVLDPDNPELNSGYATVMYRLENQDLILYETSK 233

Query: 206 -RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            ++I  L +  K  +     +A+L    +L+    G          E+L+   +S     
Sbjct: 234 YKSIELLKRAVKLNENDTVIKALL----ALKYVYLGQAEEGGKIMEEALRQTPDSPYLLR 289

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV-GKLKRALRLE 318
            A K      K   A  IL+K     P     H +I   Y   +  + +   +    +  
Sbjct: 290 HAGKFYRIVGKTDVAITILKKALNQTPTSGSLHHQIGLCYREKMKFDAMSSAIFHFEKAV 349

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E+    VE+ + ++++       D+A       +
Sbjct: 350 ELKIFFVEAYIDLARMYGRANQFDKAEDTFQKVL 383


>gi|134296605|ref|YP_001120340.1| HemY domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134139762|gb|ABO55505.1| HemY domain protein [Burkholderia vietnamiensis G4]
          Length = 395

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 50/369 (13%), Positives = 116/369 (31%), Gaps = 14/369 (3%)

Query: 26  EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85
             V + +       S  + +  +         L  + R     P  +     +   +K  
Sbjct: 28  GQVLLVYPPYRVDVSLNLFVIGIVVLFIVVYALMRIVRNIWLMPRRVAAYRARARNEKAQ 87

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
            +L   + ++ A     A K                +       A A  + +    + + 
Sbjct: 88  SSLRDAIANLYAGRFSRAEKAARDAMAVDANQGAASLV-----AATAAHRMHEYTRRDDW 142

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEW 204
           + ++ A        L     R    ++    A  A   +       + V ++     K W
Sbjct: 143 LSKVDAPEWQDARLLATADMRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNW 202

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENA---DKGDMIASYHDAIESLKLCDNSIM 261
           +  +  L +  +     +   A+ L  ++ EN     + D  A          L   S  
Sbjct: 203 AEVLK-LAKALEKRDALHPAAAVRLRQQAAENLLRERRHDADALLEVWQSLSALERQSPR 261

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
            +  AA+ L+S  ++ +A  I+E     N    +   Y      + +  ++RA   ++ +
Sbjct: 262 LADLAAELLVSLERRTEARRIVEDALAHNWDARLLRRYPDTAGNDALPLIQRAEGWKKDH 321

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANSHNTDK 377
            +  + L  + ++  +     +A +    A+K A            LA++ +        
Sbjct: 322 PDDADLLFALGRLCQQQQLWGKAQSFLEAALKQADNDALKVRTHRALARLFEHLGETDKA 381

Query: 378 ILYWTQSAL 386
             ++ +SAL
Sbjct: 382 AKHYRESAL 390


>gi|291617602|ref|YP_003520344.1| YciM [Pantoea ananatis LMG 20103]
 gi|291152632|gb|ADD77216.1| YciM [Pantoea ananatis LMG 20103]
 gi|327394031|dbj|BAK11453.1| N-acetylglucosaminyl transferase YciM [Pantoea ananatis AJ13355]
          Length = 389

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 84/281 (29%), Gaps = 55/281 (19%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +  + +     T 
Sbjct: 83  GEVDRAIRIHQSLMESASLSYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFKQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++  +    +W +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLLIHQATSDWVQAIEVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  +   A      +L+     D+  +     +       S   SI   + L+ 
Sbjct: 167 LVKLGKDKQKGEIAHFYCELALQAMSSDDLDRAMTLLKKGESADRQSARVSIMMGRILME 226

Query: 273 QNKKRKA----EVIL--EKIWKVNPHPEIANIYTHLLSENT-VGKLKR-ALRLEEINKES 324
           + +  KA    + +L  +K       P +   +  L   +     LKR          E 
Sbjct: 227 KGEHAKAIEHLQRVLDQDKELVSETLPMLETCFQRLNQPDAWAAFLKRCVEENTGAAAEL 286

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364
             S ++  +   E      A       ++  P   +F  L+
Sbjct: 287 YLSAILEQEQGAEA-----AQNYINNQLQRHPNMRVFHRLM 322


>gi|254877001|ref|ZP_05249711.1| type IV pili lipoprotein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843022|gb|EET21436.1| type IV pili lipoprotein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 300

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L++ Q    E    +A                     Y++S   G  + A++Y  KAL
Sbjct: 90  TKLIKAQELANEHNQKLAIVDY-----------AG--GYYYQSI--GANSIAEKYYQKAL 134

Query: 182 DISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           D  P          Q      +++SRA     +        +  + + L ++ +    K 
Sbjct: 135 DNHPKNYEAMNFYAQFLCTEKEDYSRAQELFEKALFMPNNNDMAQTLFLYSQCMYKQGKK 194

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           D   +Y     + K   +   A +  A+    + + ++   ++
Sbjct: 195 DDALAYMQ--RADKFRLDYKAAKLRLAQMYFERGEYKECYKVI 235


>gi|241668467|ref|ZP_04756045.1| type IV pili, pilus assembly protein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 297

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L++ Q    E    +A                     Y++S   G  + A++Y  KAL
Sbjct: 87  TKLIKAQELANEHNQKLAIVDY-----------AG--GYYYQSI--GANSIAEKYYQKAL 131

Query: 182 DISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           D  P          Q      +++SRA     +        +  + + L ++ +    K 
Sbjct: 132 DNHPKNYEAMNFYAQFLCTEKEDYSRAQELFEKALFMPNNNDMAQTLFLYSQCMYKQGKK 191

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           D   +Y     + K   +   A +  A+    + + ++   ++
Sbjct: 192 DDALAYMQ--RADKFRLDYKAAKLRLAQMYFERGEYKECYKVI 232


>gi|261379043|ref|ZP_05983616.1| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685]
 gi|269144495|gb|EEZ70913.1| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685]
          Length = 616

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 99/315 (31%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 74  LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132

Query: 184 SPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            P      + +      L  E ++ +  L +    A +    R  LL+A++    D    
Sbjct: 133 EPIPGEAQKRMTWLRSVLRGEENQRLDGLEEVLAQADDGQNRRVFLLLAQAAVQQDGLAK 192

Query: 243 IAS-----------------------------YHDAIESL----KLCDNSIMASICAAKS 269
            AS                                AI +L    KL    +  ++   + 
Sbjct: 193 KASEAVHRAAMKYGHMSEAAIADVVFNVQVREKDKAIAALQRLAKLDTEILPPTLVTLRL 252

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEI 320
           +      R+   IL   ++      ++ ++  +           ++   +LK    L + 
Sbjct: 253 VA-----RRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLRRPDDAYERLK---VLMDA 304

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     ++ A       ++    L A +  A+  +
Sbjct: 305 NPNAD----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRD 360

Query: 375 TDKILYWTQSALHAM 389
             K+  W    + A 
Sbjct: 361 YAKVRQWLTK-VSAP 374


>gi|159027098|emb|CAO89283.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 363

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 67/205 (32%), Gaps = 13/205 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLE--MM 146
           GL++    +  +A    +          +  V  L  Q         Y  A    E    
Sbjct: 12  GLLAGGCFSPSIA---IADNPAGAIVSKDSQVNELLRQARQLVKNGNYGEAIAIYEQAAA 68

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L     R F+         R GD N+A +   KAL + P  P    A+        +++ 
Sbjct: 69  LDGNNARIFSGIGFLQ--TRQGDYNAAAQAYQKALSLDPSNPDFFHALGYSLANIGDYNN 126

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A T      +   +  ++     +   +    + +   +       L L  N+  A    
Sbjct: 127 AATAYYYAIQIEPKNVQH----YLGLGVVLLRQKNYAKAGEVYQWILALDPNNQQAHEIM 182

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
            K+LI QNK  +A   L+K  +  P
Sbjct: 183 GKALIEQNKSSEAFDFLQKSLQRFP 207


>gi|149376328|ref|ZP_01894091.1| TPR repeat protein [Marinobacter algicola DG893]
 gi|149359342|gb|EDM47803.1| TPR repeat protein [Marinobacter algicola DG893]
          Length = 187

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 2/137 (1%)

Query: 51  FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110
            L A +L+   +    + PA       +    +  +     +  +   +   AR +   +
Sbjct: 3   LLLAVVLVAGCASSPKTDPADAAEAERQAREAELTQDFSEAVALLRGGDSGNARDLFEQI 62

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
            Q        L  L    IAL E   + A      +L+       A+  L   +   G+ 
Sbjct: 63  HQADPERTGPLANL--GIIALQEGNADEAEAYFRQVLERDPEHSAALTHLGVMAREQGEF 120

Query: 171 NSAQRYATKALDISPDA 187
             A+    +AL+  P  
Sbjct: 121 EQAETLYRQALEADPGH 137


>gi|186472115|ref|YP_001859457.1| cellulose synthase domain-containing protein [Burkholderia phymatum
           STM815]
 gi|184194447|gb|ACC72411.1| cellulose synthase operon C domain protein [Burkholderia phymatum
           STM815]
          Length = 1542

 Score = 46.9 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 99/336 (29%), Gaps = 37/336 (11%)

Query: 73  FHMLHKRNYDKGYKA----LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL----VYL 124
                +   + G  A    +  G  ++   ++  A+   S V        + L    V L
Sbjct: 269 RRASERAQQNAGADARGRTVAEGFAALDRGDLVTAKARFSSVLASSPNDGDALGGMGVAL 328

Query: 125 LE----VQI------ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           L+     Q       A  +       E L        T E     L  +    G+L  A+
Sbjct: 329 LKQEQFAQAREYLLRASQQGGAARWREALNSATYWMYTSE----GLGEQ--SNGNLAHAK 382

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIA 231
               KA+ +SP       A+    + + +   A        +++ +  +  R     L A
Sbjct: 383 ALFEKAIAVSPGDVTAQTALGDLLMQSGDPRGAEAAFRMALRRQADNPDAIRGLVGALAA 442

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKIWKVN 290
           +   +              + +   D     A    A++  ++     A  + E     N
Sbjct: 443 QGRGDDALSFANQLTEAQRKKVGGADRLRGEAQAAQARAAEARGDLGNARSLFEDALLSN 502

Query: 291 P-HP----EIANIYTHLLSENTVGKLKRALR-LEEINKESVESLVIVSKIALEMGSIDQA 344
           P  P    ++A IY     +      K  +  L  ++ +  ++    + +A +M      
Sbjct: 503 PDDPWLRLDLARIYAK---QGAYANAKSIMDGLIALHPDMPDAFYASALLAADMQDWRYG 559

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            ++            + LL  ++      +    L 
Sbjct: 560 LSQLERIPVNKRTDAMALLQHRLWVHQQCDEAVALA 595



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 90/286 (31%), Gaps = 30/286 (10%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL   LM   + +   A        ++   + + +  L+    A        A      +
Sbjct: 401 ALGDLLM--QSGDPRGAEAAFRMALRRQADNPDAIRGLVGALAAQGRGD--DALSFANQL 456

Query: 147 LQIPATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
            +    +      +      +        GDL +A+     AL  +PD PW+   + + Y
Sbjct: 457 TEAQRKKVGGADRLRGEAQAAQARAAEARGDLGNARSLFEDALLSNPDDPWLRLDLARIY 516

Query: 199 VLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE------NADKGDMIASYHDAIE 251
                ++ A + ++     +    +   A  L+A  ++      +  +   +    DA+ 
Sbjct: 517 AKQGAYANAKSIMDGLIALHPDMPDAFYASALLAADMQDWRYGLSQLERIPVNKRTDAMA 576

Query: 252 --SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI--ANIYTHLLSEN 306
               +L    +      A +L    +  +A  +L     V   H E+  A    ++ + +
Sbjct: 577 LLQHRL---WVHQQCDEAVALAKSGRVAQARGVLNNAEPVAGNHAELIGAIASAYVNTGD 633

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMG---SIDQAHAKAM 349
           T   L         +      L+  + I L  G    + +   +  
Sbjct: 634 TARALMMVRGAVARSPNDAGLLLTDAGILLNAGQDAELGEVMRRLA 679



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 16/237 (6%)

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRAL-RL 317
           +   +    +L   N    A  +L       P+ P+I      L + N       A  RL
Sbjct: 696 VAIVVRRTDALRQANDLASAFDVLSPWLAARPNDPDILAALARLYTANNDNANALATYRL 755

Query: 318 E-EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375
               N   +  L+  +  A ++   D A +    A++IAP   +    + ++ +A   N+
Sbjct: 756 ALAQNPNDLGLLLNAAGAATQIRKFDFAESSLRHALRIAPNNADALAAMGRMYRAQGRNS 815

Query: 376 DKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKI--PTKSPEYISSE 433
               Y  Q AL A   P  ++  G   +       ++ T     W +  P + P  +   
Sbjct: 816 LAAQY-FQRALIAQNAP--LARQGTQPA------GVNGTPVPSGWDVPLPPRGPIPLPGT 866

Query: 434 NINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS-TIHPLDPHIRQPDDPGI 489
           N   +   A  ++ +     N +   +P        + +  I P      Q D  G+
Sbjct: 867 NPFANRTSADASNSVPFPAQNTQPYLMPMPAYTPPTQPAPYIAPQTQPASQIDSLGV 923



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 23/204 (11%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE----WSRAITFLNQKKKN 217
             +      ++AQ Y  +AL   P  P   +  ++ Y         W  A   L Q  + 
Sbjct: 126 RLAQSGQQASAAQAY-RQALGTKPANP---QLALEYYQALGSSPQGWEEARRGLEQLARE 181

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA---KSLISQN 274
            ++  R       A +                 +  +L  +SI+ +   A   ++L+   
Sbjct: 182 HRDDPR------FALAYARHLTYREANRREGIEQLAQLSKDSIVGAQAKAAWRQALLWLG 235

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK- 333
             R ++  L + +     P+ A +     S +   +  RA    + N  +      V++ 
Sbjct: 236 -VRASDAPLFQAYLSV-APDDAAVKARADSISEQDR--RASERAQQNAGADARGRTVAEG 291

Query: 334 -IALEMGSIDQAHAKAMLAMKIAP 356
             AL+ G +  A A+    +  +P
Sbjct: 292 FAALDRGDLVTAKARFSSVLASSP 315


>gi|226292328|gb|EEH47748.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb18]
          Length = 938

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 90/260 (34%), Gaps = 37/260 (14%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   +A + +P+   +  A V+    AK+   A   L+  ++ A 
Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADAKQTEHARELLSTARREAG 675

Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250
                   +   R L N                              ++     +     
Sbjct: 676 TDRVWIKSVAFERQLGNTDRALDLVNQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
              + C  S+   + A++         KA  IL++       P+ A ++T  +  E    
Sbjct: 736 TGTRACPKSVPIWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 793

Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + +A  L     +E   S  + S+    LE  +  +  +      K+     +F+ +A+
Sbjct: 794 NISQAKVLMAKALQEVPNSGFLWSESIWNLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 852

Query: 367 IEQANSHNTDKILYWTQSAL 386
           I        DK + W + A+
Sbjct: 853 IFWGERK-LDKAMTWFEKAI 871


>gi|322710253|gb|EFZ01828.1| pre-mRNA-splicing factor prp1, putative [Metarhizium anisopliae
           ARSEF 23]
          Length = 925

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 54/329 (16%), Positives = 113/329 (34%), Gaps = 45/329 (13%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-- 151
           SI       AR +++Y  +            L +  A  ER +       E++ Q     
Sbjct: 535 SINRGKYDTARAIYAYAIRIFYNSRT-----LRMAAADLERNHGTKESLWEVLEQAVDAC 589

Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T E     L  E  + G++++A+    +A + +P+   +  A V+         +A   
Sbjct: 590 PTSEDLWMMLAKEKWQAGEVDNARLVLKRAFNKNPNNEDIWLAAVKLESENDNAEQARKL 649

Query: 211 LNQKKKNAKE--------------WNRNRAILLIARSLEN---------------ADKGD 241
           L   ++ A                     A+ L+ ++L+                 D G 
Sbjct: 650 LEIAREQAPTDRVWMKSVVFERVQGQVETALDLVLQALQLFPAAAKLWMLKGQIYEDLGK 709

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300
              +       +K+   S+   +  A+         KA  +L++     P  P++     
Sbjct: 710 TAQAREAYAAGVKVVPKSVPLWLLYARLEEKSGMTIKARSVLDRARLAVPKSPQLW--CE 767

Query: 301 HLLSENTVGKLKRALRL-EEINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPR 357
            +  E   G L +A  +  +  +E  +S ++  +    LE  +  +  +      K+   
Sbjct: 768 SVRLERRAGNLSQAKSIMAKAQQEIPKSGLLWVEQIWHLEPRTQRKPRS-LEAIKKVDND 826

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSAL 386
             +F+ +A+I  A+    +K   W + AL
Sbjct: 827 PLLFVGVARIFWADRK-LEKAQNWFEKAL 854


>gi|297622686|ref|YP_003704120.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix
           DSM 17093]
 gi|297163866|gb|ADI13577.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
           17093]
          Length = 740

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 19/275 (6%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL   L+     +  LA       +            L E Q A A        ++    
Sbjct: 346 ALIGELVRRGEGDEALAVLEARLAADPDPSAYALASALGEAQSARALEILREGRQRYPQD 405

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             +       +          G+L +A+    +ALD +P  P +   +      A     
Sbjct: 406 AALALAEAEVLRG-------TGNLEAAEAVLQEALDAAPTNPELANQLAITQAQAGRTDE 458

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L        +        L    LE       I      +                
Sbjct: 459 ARATLEAALAQNPQARGVLERNLAQLLLEAGQNEAAIGVLEPLLARDAGDPELYT---LY 515

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
             +L    +  +A   L++  ++ P  + A     L+ +N   +L  A RL   + +   
Sbjct: 516 GLALGGAGRFDQALNALDEALRLAPTSQDAQNARRLVEQN--QRLTGAERLA-FDPDVAA 572

Query: 327 ------SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                 S +   ++A      D+A          A
Sbjct: 573 VFGAGLSALQADELAAAQREFDRAAELQADVADEA 607



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 40/199 (20%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  D   A     +A++  P++  +  A++ + V   E   A+  L  +     + +  
Sbjct: 318 RRTDDAEGALITLREAVERVPESASLHAALIGELVRRGEGDEALAVLEARLAADPDPS-- 375

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                         +     +     E  +        ++  A+ L        AE +L+
Sbjct: 376 -----AYALASALGEAQSARALEILREGRQRYPQDAALALAEAEVLRGTGNLEAAEAVLQ 430

Query: 285 KIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +     P  PE+AN                               + +++   + G  D+
Sbjct: 431 EALDAAPTNPELAN------------------------------QLAITQA--QAGRTDE 458

Query: 344 AHAKAMLAMKIAPRKEIFL 362
           A A    A+   P+    L
Sbjct: 459 ARATLEAALAQNPQARGVL 477


>gi|117623540|ref|YP_852453.1| hypothetical protein APECO1_440 [Escherichia coli APEC O1]
 gi|218558270|ref|YP_002391183.1| tetratricopeptide repeat protein [Escherichia coli S88]
 gi|115512664|gb|ABJ00739.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218365039|emb|CAR02742.1| conserved hypothetical protein [Escherichia coli S88]
 gi|323949116|gb|EGB45008.1| TPR repeat-containing protein [Escherichia coli H252]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|24112679|ref|NP_707189.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 301]
 gi|24051595|gb|AAN42896.1| putative heat shock protein [Shigella flexneri 2a str. 301]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|197102096|ref|NP_001126072.1| interferon-induced protein with tetratricopeptide repeats 2 [Pongo
           abelii]
 gi|55730255|emb|CAH91850.1| hypothetical protein [Pongo abelii]
          Length = 472

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 33/218 (15%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     H +I   Y             RA  L+ +N    E+ +   +  LE+  I
Sbjct: 274 LEYIPNNAYLHCQIGCCY-------------RAKALQVMN--LRENGMYGKRKLLEL--I 316

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
             A A    A +       +  +LA +       E+A 
Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354


>gi|225875069|ref|YP_002756528.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225792210|gb|ACO32300.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 476

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQI 149
            L++    + PLA K+            + + YL   QIA   R   +  + L   + Q+
Sbjct: 221 ALLAEDTGDTPLAVKLLRAAIA--AEPRDEMNYLEFAQIAFDHRSPQVGIDMLNAGLTQL 278

Query: 150 PATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           P   +  +   +     +I   N+A     +A  ++P      +A+        + + A+
Sbjct: 279 PNAAQLYLARGVLE--VQISHFNAAIADFQRAHKLAPQLSLAMDAMGIMESQQYKQTSAL 336

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               ++ ++  +    + +   A S  N  K   I +   A +S++       A    A 
Sbjct: 337 QLYRKEARSHPKDGLLQYLYAEALSEANPTKDASIEAIAAARKSVESEPGYAPARDLLAL 396

Query: 269 SLISQNKKRKAEVILEKIWKVNP 291
             +  +  ++A    +   K+NP
Sbjct: 397 LYLRIHNSQQALKEAQTALKINP 419


>gi|30062802|ref|NP_836973.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 2457T]
 gi|30041050|gb|AAP16780.1| putative heat shock protein [Shigella flexneri 2a str. 2457T]
 gi|281600703|gb|ADA73687.1| putative heat shock protein [Shigella flexneri 2002017]
 gi|313649468|gb|EFS13899.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str.
           2457T]
 gi|332757935|gb|EGJ88262.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70]
 gi|332759437|gb|EGJ89745.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71]
 gi|332760376|gb|EGJ90666.1| tetratricopeptide repeat family protein [Shigella flexneri K-671]
 gi|332767516|gb|EGJ97710.1| tetratricopeptide repeat family protein [Shigella flexneri 2930-71]
 gi|333004596|gb|EGK24120.1| tetratricopeptide repeat family protein [Shigella flexneri VA-6]
 gi|333005457|gb|EGK24975.1| tetratricopeptide repeat family protein [Shigella flexneri K-218]
 gi|333007619|gb|EGK27097.1| tetratricopeptide repeat family protein [Shigella flexneri K-272]
 gi|333019119|gb|EGK38409.1| tetratricopeptide repeat family protein [Shigella flexneri K-304]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|268573864|ref|XP_002641909.1| C. briggsae CBR-OGT-1 protein [Caenorhabditis briggsae]
          Length = 1148

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 77/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+   +   N  +V+     +   +   ++A +  +  +++      A  +L   
Sbjct: 344 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQPHFPDAYCNLANA 403

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G ++ A+    KAL++ P        +        +   A     +  +   E+  
Sbjct: 404 LKERGSVSEAETMYLKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 461

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  +     E++++      A      +L        A    
Sbjct: 462 --AAAHSNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSAIACY 519

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  ++NP     H  +A+I+      N    ++      ++  +  ++   ++
Sbjct: 520 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYGTALKLKPDFPDAFCNLA 571



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 21/281 (7%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAH 140
            Y  L   L+S    ++  A   +    +           L  LL+        +   A 
Sbjct: 226 AYINLAAALVS--GGDLEQAVAAYFNALRINPDLYCVRSDLGNLLKAM-----GRLEEAK 278

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                 ++       A  +L       G++  A  +  KA+ + P+       +      
Sbjct: 279 VCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKE 338

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A+ + RA++   +        + N A++    +    ++G +  +     ++++L  +  
Sbjct: 339 ARIFDRAVSAYLRAL----NLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQPHFP 394

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRAL 315
            A    A +L  +    +AE +  K  ++ P H +    +ANI           +L    
Sbjct: 395 DAYCNLANALKERGSVSEAETMYLKALELCPTHADSQNNLANIKREQGKIEDATRLY-LK 453

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            L EI  E   +   ++ I  + G +  A      A++I+P
Sbjct: 454 AL-EIYPEFAAAHSNLASILQQQGKLQDAILHYKEAIRISP 493



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A  M+    +    H +    L    I   + +   A       L+I      A 
Sbjct: 408 GSVSEAETMYLKALELCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 465

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ ISP        +        + S AI   N+  + 
Sbjct: 466 SNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSAIACYNRAIQI 525

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G+M  +      +LKL  +   A    A  L
Sbjct: 526 NPAF----ADAHSNLASIHKDAGNMAEAIQSYGTALKLKPDFPDAFCNLAHCL 574


>gi|330818349|ref|YP_004362054.1| TPR domain protein [Burkholderia gladioli BSR3]
 gi|327370742|gb|AEA62098.1| TPR domain protein [Burkholderia gladioli BSR3]
          Length = 620

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 13/248 (5%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180
            +L  ++AL   Q   A +    + +       A  +  +   +    D  +A     + 
Sbjct: 94  QVLAAEVALQRGQPAPAFQTYLALARDTKDPRMAQRATEIALAAQSPADALAAANLWRE- 152

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              +PD+    +      VLA +   A   L ++       NR  AIL    +L+     
Sbjct: 153 --YAPDSNRAAQVDAALLVLAGKPLDAEPLLGRELARTNGDNRGDAIL----ALQALIAR 206

Query: 241 DMIASYHDAIESLKLCDNSI-MASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
                    +    L D+ I   +  A A+  ++ + K  A   L++  ++ P    A +
Sbjct: 207 GPNRVDGLTVLQHLLKDDLIRPEARLAIARQQLAVDDKPAAVTSLKQALELKPDYLPAAL 266

Query: 299 YTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +  +     +    +  + N ++ E  + ++++ L    +D A  +     +  P+
Sbjct: 267 MLSQMGPDERAIGVASFEKYVQQNPKAREGRLALAQLYLADNRLDDAQKQFETMHRNDPK 326

Query: 358 KEIFLLLA 365
           +    L+A
Sbjct: 327 EPA-PLMA 333



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 53/202 (26%), Gaps = 39/202 (19%)

Query: 185 PDAPWVTEAVVQQYVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           P  P   + V Q           + + A        ++ K+    +    IA + ++   
Sbjct: 83  PGVPLSAQIVYQVLAAEVALQRGQPAPAFQTYLALARDTKDPRMAQRATEIALAAQS--- 139

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
                +   A    +   +S  A+   A  L+   K   AE            P +    
Sbjct: 140 --PADALAAANLWREYAPDSNRAAQVDAALLVLAGKPLDAE------------PLLGREL 185

Query: 300 THLLSENTVGKLKRALRLEEINKES-----------------VESLVIVSKIALEMGSID 342
                +N    +     L                         E+ + +++  L +    
Sbjct: 186 ARTNGDNRGDAILALQALIARGPNRVDGLTVLQHLLKDDLIRPEARLAIARQQLAVDDKP 245

Query: 343 QAHAKAMLAMKIAPRKEIFLLL 364
            A      A+++ P      L+
Sbjct: 246 AAVTSLKQALELKPDYLPAALM 267


>gi|170036979|ref|XP_001846338.1| o-linked N-acetylglucosamine transferase, ogt [Culex
           quinquefasciatus]
 gi|167879966|gb|EDS43349.1| o-linked N-acetylglucosamine transferase, ogt [Culex
           quinquefasciatus]
          Length = 838

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 107 GQVQEAEDCYNTALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 163

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ + A+    +  +
Sbjct: 164 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 223

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 224 INPAF----ADAHSNLASIHKDSGNIPDAIQSYRTALKLKPDFPDAYCNLAHCL 273



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +       N A  L   +    
Sbjct: 83  RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLCP----NHADSLNNLANIKR 138

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 139 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 196

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I  A      A+
Sbjct: 197 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPDAIQSYRTAL 256

Query: 353 KIAPR 357
           K+ P 
Sbjct: 257 KLKPD 261


>gi|115523543|ref|YP_780454.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53]
 gi|115517490|gb|ABJ05474.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53]
          Length = 732

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 101/298 (33%), Gaps = 31/298 (10%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           RK    +        E ++ L+  ++     Q + A    + +L+       A++     
Sbjct: 19  RKNAPPLRSNPDKDYEPVLQLVRARMLHQAGQLDEAKSAYKKVLKKAPNNFQALHFYALA 78

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--- 220
             + G L +  R   +AL I P++      +    + A  +  A+   ++      +   
Sbjct: 79  EHQSGHLETGIRNLKRALLIDPNSAPAHSDMANMMIDANRFEEALKSCDKAIALDPKLVL 138

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            + NR   L    L      D +AS  DA+    L  N   +      SL    +  +A 
Sbjct: 139 AHHNRGHTL----LHLERLEDAVASLDDALA---LDPNRADSWNDRGNSLQKLARYDEAL 191

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEI------NKESVESLVIVSK 333
               K   ++P  ++A    ++   +T  +LKR    L          K  VE+ +  ++
Sbjct: 192 ESYAKAIAIDPLHDMA----YMNRASTFKELKRLDDALASYDRALSIGKRPVEAGICRAE 247

Query: 334 IALEMGSIDQAHAKAMLAMKIAP-RKEIFLL----LAQIEQANSHNTDKILYWTQSAL 386
           I L   ++  A       + I P       L    +A +      + +  +     AL
Sbjct: 248 ILLNKKNVKDAMQTVTAVLNIEPNSVSGLTLLGNCMASL-----GDAETAIALYSRAL 300


>gi|114631703|ref|XP_507902.2| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 2 [Pan troglodytes]
          Length = 472

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 33/218 (15%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     H +I   Y             RA  L+ +N    E+ +   +  LE+  I
Sbjct: 274 LEYIPNNAYLHCQIGCCY-------------RAKVLQVMN--LRENGMYGKRKLLEL--I 316

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
             A A    A +       +  +LA +       E+A 
Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354


>gi|307322270|ref|ZP_07601636.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti AK83]
 gi|306892087|gb|EFN22907.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti AK83]
          Length = 624

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 56/148 (37%), Gaps = 14/148 (9%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    +  L  + +     +  +  +++ L  +   A    A++  +Q K  +A  + ++
Sbjct: 420 AEAHASLGLALSLRERHSEAMAEFDQAIALDPDLFEAHYFYARACFTQGKLDEAARLFQR 479

Query: 286 IWKVNPHPE-------IANIYTHLLSE---NTVGK--LKRALRLEEINKESVESLVIVSK 333
              +   P+       + N+   L  E   N   +  + RA R   +  E+     + + 
Sbjct: 480 AADIK--PDDYQALLVLINVLRSLGREQEMNAAAREGVARAERELMMRPENPRPAYLGAV 537

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               +G +D+A   A+ A+ I P   + 
Sbjct: 538 GLAALGELDRAKEWAVRALAIDPDDRLA 565


>gi|322421463|ref|YP_004200686.1| hypothetical protein GM18_3992 [Geobacter sp. M18]
 gi|320127850|gb|ADW15410.1| hypothetical protein GM18_3992 [Geobacter sp. M18]
          Length = 694

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 57/176 (32%), Gaps = 19/176 (10%)

Query: 133 ERQYNIA------HEKL---EMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKA 180
           E     A       +     E +L+ P     A      E+ +    G+   A R+  +A
Sbjct: 211 EGDSTEAVFQDGQQQDFPTLEELLRNP--AAVAAQEQLAEARKAIGFGERAIAIRHLKRA 268

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIARSLE 235
           L+  P   W +  + Q  + +   +          +  K           A   I  +  
Sbjct: 269 LEHRPLDIWASYTLAQLLMQSGRKNDCREAFEIASRAGKMALHDRRKVRSADCFILAAKA 328

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               GD+++    A  ++++      A I  A    S NK ++A       +++ P
Sbjct: 329 ANKAGDVVSGMSSAENAVEVTPWLASAHIELACQFASDNKVQEAVNKAMFAFQLQP 384


>gi|258405779|ref|YP_003198521.1| type II secretion system protein E [Desulfohalobium retbaense DSM
           5692]
 gi|257798006|gb|ACV68943.1| type II secretion system protein E [Desulfohalobium retbaense DSM
           5692]
          Length = 785

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 35/241 (14%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRY----ATK 179
           L  + A      + A      +  +  TR  A    L  +  ++ D  + +      A +
Sbjct: 16  LVQETAEQGDLRSSARAAQRTLFVLRQTRPLAARKGLTKQWRKMEDYFAGRSEPGLGAEE 75

Query: 180 ALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                       + V+++        ++   +T L  + +N K     R  +L+  + E 
Sbjct: 76  PAGGEVALG-TGQGVLERARKRCANGDYEGGLTVLLHEYRNGK-----RDPVLLRFAAEC 129

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-----SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +  +      D I S  L      A         +   +   K  +A   L K+ +++P
Sbjct: 130 FEHSNRYQEGADFIASALLEQEFPPADQAHLQFVLSGWYLQLGKTNEARQALWKVQRLDP 189

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL--VIVSKIALEMGSIDQAHAKAM 349
           H      Y  L          R   L     E  +S   ++++   L    + QA  +A 
Sbjct: 190 H------YPGLQG--------RLQHLLPAQTEKPKSRYGLLLASGQLSEEQLQQATEEAN 235

Query: 350 L 350
            
Sbjct: 236 K 236


>gi|16127050|ref|NP_421614.1| TPR domain-containing protein [Caulobacter crescentus CB15]
 gi|13424424|gb|AAK24782.1| TPR domain protein [Caulobacter crescentus CB15]
          Length = 526

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 77/275 (28%), Gaps = 17/275 (6%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEK-LEMMLQIPATREF 155
           +   A       +            LL    A  +   + + A       + + P  R  
Sbjct: 43  DNGRAADALRLTTGPVALPQAS-AGLLMAHAAALKALGRTDEALTFNRRAVARAPGDRF- 100

Query: 156 AVYSLYFESCRIGDL---NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              S Y  +  +GDL   + A+  A K + +  D P V   + +       +  A     
Sbjct: 101 ---SWYNLAATLGDLALDDEAEGAARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFV 157

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +          +  + L    L     G    +      ++      +      +  L  
Sbjct: 158 RALAARP---SDATVHLNLAQLRWMRSGRSDEALAPLDAAIARHPADVTLRTIRSNVLTF 214

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINKESVESLV 329
                 A+  LE      P      I     +     +   L  A     +   ++ES  
Sbjct: 215 AGDHAGADATLEDALTRAPGDLAVRIAAARAAGAVGDRARMLAHAREAARLAPGALESQT 274

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           ++ +  L  G  D A   A   +  AP  +  L+L
Sbjct: 275 VLCEALLAAGQADVAARTAEALVAAAPDDQYALVL 309


>gi|322796271|gb|EFZ18847.1| hypothetical protein SINV_80216 [Solenopsis invicta]
          Length = 1022

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 86/267 (32%), Gaps = 13/267 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +   +    V L      +       A    E  L
Sbjct: 152 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 210

Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           Q+      A+  L              +  +  +KA  I    P V   +   +   K++
Sbjct: 211 QLDGQCVGALVGLSVLKLNQQQPESIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 270

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263
           ++ +  L     +  E    RA      +     +GD   ++    ++ +      ++  
Sbjct: 271 NK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 329

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317
               +  + +     A    EK+ K  P        + ++Y +  S++     K    ++
Sbjct: 330 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 389

Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344
            E   + VE+ + +++I LE   ++ A
Sbjct: 390 TEQFPDDVEAWIELAQI-LEQSDLNAA 415


>gi|315633976|ref|ZP_07889265.1| lipopolysaccharide N-acetylglucosaminyltransferase [Aggregatibacter
           segnis ATCC 33393]
 gi|315477226|gb|EFU67969.1| lipopolysaccharide N-acetylglucosaminyltransferase [Aggregatibacter
           segnis ATCC 33393]
          Length = 396

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 44/193 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151
             +  A ++H  +     +  E    LL  Q     + +      + A     +M+  P 
Sbjct: 91  GEVDRALRIHQALDNSPYYTFEQ--KLLAKQ--QLAKDFMAVGFFDRAEHLYILMVDEPE 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                                   +A  AL           A++ Q      W +AI   
Sbjct: 147 ------------------------FAEAALQ--------QLAIIYQKTKE--WKKAINVA 172

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K + + N           + N  +          +++LK+  +   ASI  A   I
Sbjct: 173 EKLAKISPKKNHIELAHYYCEYVRNLPQDSKENPQQILLQALKVSPSCARASIMLADLAI 232

Query: 272 SQNKKRKAEVILE 284
            Q   + A  ILE
Sbjct: 233 KQENYKSAVDILE 245


>gi|94969466|ref|YP_591514.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 448

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 5/173 (2%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              H   +++LL       + +   A    E  L +       +Y+L        +   A
Sbjct: 268 LDAHQPEVLFLLGA-AYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRA 326

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                KAL   P+       +    + + +   AI    +      +    R     A  
Sbjct: 327 IDSYQKALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATA-- 384

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +KG+   +  +  E++KL  +   A      SL+  N    A+   E+ 
Sbjct: 385 --LFNKGNFKEAAENYREAVKLKPDFAHAHYNLGMSLLRLNDAAGAKSEFEEA 435



 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 63/196 (32%), Gaps = 7/196 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            ++G  N A     KAL   P +      + Q    AK++  A    N+      + ++ 
Sbjct: 216 QQLGRTNEAITEYEKALKGDPKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLH--LDAHQP 273

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             + L+  +    ++G    + H   + L L  ++         +  +Q +  +A    +
Sbjct: 274 EVLFLLGAA--YTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQ 331

Query: 285 KIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           K     P   H         L S      +    +L  +  +        +      G+ 
Sbjct: 332 KALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATALFNKGNF 391

Query: 342 DQAHAKAMLAMKIAPR 357
            +A      A+K+ P 
Sbjct: 392 KEAAENYREAVKLKPD 407


>gi|87306790|ref|ZP_01088936.1| cell division cycle protein 48-related protein [Blastopirellula
           marina DSM 3645]
 gi|87290163|gb|EAQ82051.1| cell division cycle protein 48-related protein [Blastopirellula
           marina DSM 3645]
          Length = 446

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 7/159 (4%)

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---I 295
             D +A+   A+E   +  ++I   +  A++L    +  + E  L++     P      +
Sbjct: 2   SNDAVAALRAALE---VSPHNIPLRLHLAQTLAELGRTAEVEAELKEALTYEPQNAEIKL 58

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A     + +  +   L     + +  + S E+ V+++++ L  G +  A A    A++  
Sbjct: 59  ALARLFVRTAKSSQALVILEEIAQRGEASAEARVVLARLLLAEGEVRSAVAHYKEAIETD 118

Query: 356 PRKEIFLLLAQIEQANS-HNTDKILYWTQSALHAMPDPL 393
           P  E   L AQ+    +  ++D      +    A P+P+
Sbjct: 119 PDVEDAELSAQLGVGAAWQDSDVSEGRLREMADAAPEPV 157


>gi|163847235|ref|YP_001635279.1| hypothetical protein Caur_1672 [Chloroflexus aurantiacus J-10-fl]
 gi|222525076|ref|YP_002569547.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163668524|gb|ABY34890.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448955|gb|ACM53221.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 520

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 15/171 (8%)

Query: 200 LAKEWSRAITFLNQKKKNA--------KEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           L   ++ AI         A        + + R RAI+ +      A +     +  + +E
Sbjct: 41  LRAAYADAIEHFKAALIAAYVDGEEQAQIYERERAIIYLYIGNSLAFQDHWEEALREYLE 100

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306
           +++       A      +  +  +  +A    ++  + NP     H  +   Y  +  ++
Sbjct: 101 AVQTDPQLAEAHYNLGVAFAALGQIDRAIAAFKETLEHNPNLYEAHFALGRCYQRI--DD 158

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                           ++ E    +  +    G+ + A      A+++ P 
Sbjct: 159 AGRAYIHFSSACNARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 87/300 (29%), Gaps = 50/300 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ-------QHTFHNEYLVYLLE----------VQIALAE 133
           GLM  +     LA++  +   +            +E LV   E           Q    +
Sbjct: 184 GLMHQSHGAHELAQRCFAEALRVEPTFVSPEPLPDEPLVQRSEEEVAQWYYRLSQALKQQ 243

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD----ISPDAPW 189
                A      +LQ       A Y L       G+L + QR   +A      I P    
Sbjct: 244 GYEEEAERIYRALLQWRPQEYAARYLL-------GNLLARQRRFEEAYAEYEQIPPQHRH 296

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDM 242
             +A ++          AI  L +K K A          N +   L +       D G  
Sbjct: 297 YVDARLR--------MSAILRLQKKPKQAYELLFACARLNPHHGQLFLHMGKLLYDMGMN 348

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIAN 297
             +      +++L      A         +  +   A     K  ++ P  H    ++  
Sbjct: 349 TQAARAFERAVQLMPTDAQAHYLLGFVYNTLGRDTWALAAWRKAVQLAPEAHSLRFDLGY 408

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +Y      +         ++ E   + +E+  ++     E+    +A       ++  PR
Sbjct: 409 MYIRRGRYDLAA--AEFQQVLEQWPDDLETQFMLGLCYKELLEPARAIPLFEKVLRRNPR 466


>gi|332705763|ref|ZP_08425839.1| hypothetical protein LYNGBM3L_10980 [Lyngbya majuscula 3L]
 gi|332355555|gb|EGJ35019.1| hypothetical protein LYNGBM3L_10980 [Lyngbya majuscula 3L]
          Length = 303

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 14/144 (9%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-- 181
           +L  Q+         A +    +L        A+  L     +     +A       L  
Sbjct: 135 VLLAQVKQQIGDREGAAQAYRDILNAKPGDMNALQGLVSLLTQENRPEAAIGLLQDTLKS 194

Query: 182 -----DISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                +I P +  V    +   Q Y   K +  A    +Q  K  ++  R     ++A++
Sbjct: 195 SQQVNEIKPGSIDVISVQLLLGQVYANQKRYDEATAIYDQAIKGNQDDWRP----VLAKA 250

Query: 234 LENADKGDMIASYHDAIESLKLCD 257
           +   ++G+   +     ++  L  
Sbjct: 251 MIFQEQGNTEKAKPLFDQATSLAP 274


>gi|167568720|ref|ZP_02361594.1| TPR domain protein [Burkholderia oklahomensis C6786]
          Length = 606

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 109/336 (32%), Gaps = 58/336 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 51  DAPQATFAPALPEEQKDLPNVALTSQIVYQVLAAEVALQRNLPAPAYQTYLALARDTRDP 110

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP A  V  A++   VL  + + A   L
Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWREYSPSSPRAAQVDAALL---VLGGKPADAQPML 167

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
            Q+   A   NR  AI+ +                                A + +    
Sbjct: 168 AQELARATGENRGEAIIALQALLSRGPNRVGGLTVLQDLLKNDMNRPEARLAIARQQLAT 227

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L+L  + + A++     L       +A  ++     V  +P+     
Sbjct: 228 DDKGGATQSLKEALRLKPDYLPAALM----LSQMGPNERAAGVVSFEKFVQQNPKSRDGR 283

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 284 LALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVKV 343

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
           A +K      + ++ LAQI    +++      W   
Sbjct: 344 AQKKPGADVGQAYVYLAQIALDQNNDALAAQ-WLDK 378



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 78/243 (32%), Gaps = 45/243 (18%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q+ LA+ + + A ++ E M +  ++    + +L     +   L+ A  Y  + + 
Sbjct: 283 RLALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVK 342

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++                             +KK   +  +    L    +    D+ + 
Sbjct: 343 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNND 369

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----- 297
             +     +  +     + A +  A+ L  Q K  +A  +L  +   +P  + A      
Sbjct: 370 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKAEEARKLLANLQVSDP-RDAAVIARTD 428

Query: 298 ---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              ++T    +    +L +A    E   +  +     +    ++G       +  L M+ 
Sbjct: 429 ASILFTSKRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRA 485

Query: 355 APR 357
            P 
Sbjct: 486 QPD 488


>gi|159463248|ref|XP_001689854.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283842|gb|EDP09592.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 698

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 28/281 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREF 155
             + LAR+ +     +     +   + ++  +     R+   A       +  IP     
Sbjct: 226 GEVGLARRCYERAVDELGEDAQTEEFFIKFAEFEEKAREVERARAIYRYALDHIPKASAP 285

Query: 156 AVYSLYFESCRI-GDLNSAQRYA--------TKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           ++Y  +    +  GD    ++           + +  SP         ++      +  R
Sbjct: 286 SLYQRFVAFEKQHGDREGIEQVVVSKRRFQYEEDIAKSPYNYDTWFDYIKLEEGTGDIER 345

Query: 207 AITFLNQKKKNAKEWN------RNRAILLIARSL-ENADKGDMIASYHDAIESLKLCD-- 257
                 +        +      R    L +  +L E  D  D   +       L L    
Sbjct: 346 TREVYERAVAQLPPSSAEKRFWRRYIYLWVKYALFEELDCADPDRTRDVYRAVLDLIPHR 405

Query: 258 --NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                   I AAK  I Q        +L +   + P  ++   Y  L  E T+G + R  
Sbjct: 406 QFTFAKIWIMAAKFEIRQRNVEGCRKLLGRALGLCPKEKLFKAYIEL--ELTMGNVDRVR 463

Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +L     E    +V + V  + +  ++G   +A A   LA+
Sbjct: 464 KLYEKYLEWRPSNVGAWVRFADLERQLGETGRARALYELAI 504


>gi|187920514|ref|YP_001889546.1| cellulose synthase operon C domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718952|gb|ACD20175.1| cellulose synthase operon C domain protein [Burkholderia
           phytofirmans PsJN]
          Length = 1569

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 59/207 (28%), Gaps = 17/207 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL SA       L   PD P +  A+ + Y  A +   A+       +   +    
Sbjct: 711 RQRGDLASAYDVIAPWLAAMPDNPDLQAALGRLYSTAGDDRNALASYRVALQRKPDDLNL 770

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               + A +           +   A ++L              +   ++ K   A   L+
Sbjct: 771 LQATISAAAGAKQFS----YAETLAKQALTAAPADPGVLATVGRMYRAEGKLSLASTYLQ 826

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSK------ 333
           +       P +AN        + V +     ++R            E             
Sbjct: 827 RSLVAANTPLMANA--PRSPASNVPRGWEVAMRRIGATPLPGTNPFEGKTATVTPTDADN 884

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEI 360
            AL  GS + A +    +    P + +
Sbjct: 885 AALAGGSYNAARSALPYSQSSLPTQTV 911



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 88/274 (32%), Gaps = 35/274 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G M +A  +   A + +    ++   + + +  L+    A        A +    +    
Sbjct: 407 GEMLLANGDPSGAEQAYRMALRRQADNPDAVRGLVGALAAQGRGD--EALQFANQLNTEQ 464

Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            ++      +      +        GDL SA+     AL  +PD PW+   + + YV   
Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             + A + ++       +        L A +L +A+  D  A               I  
Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSAGLAQLER--------IPV 572

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           +           ++  A   L+    V+   ++A       +  T   L      E +  
Sbjct: 573 A-----------QRTDAMTTLQHRLWVHQQADLAT--RMARNGQTQQALATLQAAEPVAG 619

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            S E + +++    + G  ++A      AM  AP
Sbjct: 620 NSPELIGVIAAAYSQAGDPNRALGLVRAAMNAAP 653


>gi|13543269|gb|AAH05801.1| Prpf6 protein [Mus musculus]
          Length = 493

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 36/198 (18%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P      +          GD+ +A+     A  
Sbjct: 131 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 188

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228
            +P++  +  A V+      E+ RA   L + + +A                   + A  
Sbjct: 189 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQE 248

Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           L   +L + +                  M  +     + LK C +S    +  ++     
Sbjct: 249 LCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 308

Query: 274 NKKRKAEVILEKIWKVNP 291
            +  +A  ILEK    NP
Sbjct: 309 GQLTRARAILEKSRLKNP 326


>gi|46122229|ref|XP_385668.1| hypothetical protein FG05492.1 [Gibberella zeae PH-1]
          Length = 823

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 91/260 (35%), Gaps = 15/260 (5%)

Query: 136 YNIAHEKLEMMLQIPATRE--FAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           Y  A +    M     +R     VYS + +   R  DL+     A + +D +  +P    
Sbjct: 546 YAEAEKFFRRMRVQAPSRLEDMEVYSTILWHLRRETDLS---FLAHELVDSAWLSPQAWC 602

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+   + LA++  +A+    +  +   ++    A     +  E     +   +     ++
Sbjct: 603 ALGNAWSLARDHEQALKCFKRATQLDPKF----AYAFTLQGHEYVTNEEYDKAQTAYRQA 658

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-- 310
           +        A     +         KA         +NP+  +       + E       
Sbjct: 659 ISADKRHYNAYYGIGRVQERLGAYDKAYTHFHAAQSINPNNAVLITCIGTVLEKQKQIMP 718

Query: 311 -LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIE 368
            L+   +  E+   + ++    ++  L +G ++QA  + M+   +AP    +  LL ++ 
Sbjct: 719 ALQAYSKAVELAPRAAQTRYKKARALLAVGQLEQAQKELMILKDLAPDEATVHFLLGKLY 778

Query: 369 QANSHNTDKILYWT-QSALH 387
           ++       + ++T   AL 
Sbjct: 779 RSMGEKQLSVRHFTIALALD 798



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 59/185 (31%), Gaps = 20/185 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q          + L+    +   +Y+ A       +        A Y
Sbjct: 613 DHEQALKCFKRATQLD--PKFAYAFTLQGHEYVTNEEYDKAQTAYRQAISADKRHYNAYY 670

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYV----LAKEWSRAITFL 211
            +     R+G  + A  +   A  I+P+   +      V+++        + +S+A+   
Sbjct: 671 GIGRVQERLGAYDKAYTHFHAAQSINPNNAVLITCIGTVLEKQKQIMPALQAYSKAVELA 730

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +    + + RA+L +         G +  +  + +    L  +         K   
Sbjct: 731 PRAAQTR--YKKARALLAV---------GQLEQAQKELMILKDLAPDEATVHFLLGKLYR 779

Query: 272 SQNKK 276
           S  +K
Sbjct: 780 SMGEK 784


>gi|42526563|ref|NP_971661.1| putative lipoprotein [Treponema denticola ATCC 35405]
 gi|41816756|gb|AAS11542.1| lipoprotein, putative [Treponema denticola ATCC 35405]
          Length = 598

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 5/118 (4%)

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTH--LLSEN 306
           E+ KL   S++A           NK  +A  + +K W+++   +P     Y H    S N
Sbjct: 196 EAQKLRPQSVLAYYLLGLYKEKTNKLTEAVTLYQKAWQLDSSCYPA-GFKYGHFAAESGN 254

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
               LK A  L  +  ++ E  ++ ++  +    +++A    +  +K  P     LLL
Sbjct: 255 GTETLKIADALNSLYNDNTEVKLLYAQAHIAKNDLNKASENIVSVLKKEPENISALLL 312


>gi|55981628|ref|YP_144925.1| TPR repeat-containing protein [Thermus thermophilus HB8]
 gi|55773041|dbj|BAD71482.1| tetratricopeptide repeat family protein [Thermus thermophilus HB8]
          Length = 453

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 18/227 (7%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+  +A  +   AL+  P      + + +         RA   + +  +  ++       
Sbjct: 171 GEREAAVPHLYAALNREPGRAEAWDLLARVLAEVGLTDRARREVERGLEAVQDPKGK--A 228

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           LL+ R     +  + +       E+L L  +   A+    +  +     ++    L++ +
Sbjct: 229 LLLLRKGTLVEDPEPL-----WREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAY 283

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHA 346
                PE+A        +                KE+      + ++ A  +G   +A  
Sbjct: 284 AKGQDPEVALALAAAYLKAKD-----YANAYRYAKEAGPAGAFLQAQAAQGLGRRQEALK 338

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                   +P+         +E+             Q+A  A  DP 
Sbjct: 339 LLEGLA--SPQALALRGSLLLEEGQGEEAVAA---LQAAYEATRDPQ 380


>gi|327303038|ref|XP_003236211.1| pre-mRNA splicing factor prp1 [Trichophyton rubrum CBS 118892]
 gi|326461553|gb|EGD87006.1| pre-mRNA splicing factor prp1 [Trichophyton rubrum CBS 118892]
          Length = 938

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G++++ +R   +A   +
Sbjct: 579 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 637

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230
           P+   +  A V+      +  +A   L+  ++ A                 NR+ A+ L+
Sbjct: 638 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 697

Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            + L+                   G +  +        + C  S+   + A++       
Sbjct: 698 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 757

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
             KA  +L++       P+ A ++T  +  E     + +A  L     +E   S ++ S+
Sbjct: 758 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNMSQAKSLMSKALQEVPNSGLLWSE 815

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               LE  +  +  +      K+     +F+ +A+I        +K + W + A+ A  D
Sbjct: 816 SIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 873


>gi|323449294|gb|EGB05183.1| hypothetical protein AURANDRAFT_54803 [Aureococcus anophagefferens]
          Length = 897

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 88/264 (33%), Gaps = 14/264 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A + +    +      +    L      +   Q N A E  +M L I      A 
Sbjct: 61  GDVRGAMQFYLKAIKCKPRFGDAYNNL--ASAHMHLGQTNDAIETFQMGLVIDPGLVDAH 118

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L       G L +A+R   +A+ ++P        +   +    + S AI +  +  + 
Sbjct: 119 CNLGNLFKAQGKLAAARRCYLEAIRLNPGFAIAWSNLAGIFKDEGQLSTAIAYYREAIRL 178

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +    A +         ++G+ + +      +++L  +  +A       L++ N  +
Sbjct: 179 CPPF----ADVYSNLGSAMQEQGNFVEARQCYQTAIRLRPDFAIAHGNLGSCLLASNDAK 234

Query: 278 KAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            A   L    ++ P+ P+    + N    L        +        +  +   +   + 
Sbjct: 235 GAVRALRHAVQLEPNFPDAYNNLGNA---LRKTFMREAISCYRTALHLKPDHPHAYSNLG 291

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
               + G + +A    + A ++ P
Sbjct: 292 NAMRDRGLVREAIHCNVTAARLMP 315



 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 66/202 (32%), Gaps = 11/202 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +GD+  A ++  KA+   P        +   ++   + + AI           
Sbjct: 53  LANALKELGDVRGAMQFYLKAIKCKPRFGDAYNNLASAHMHLGQTNDAIETFQMGLV--I 110

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +     A   +    +   +G + A+    +E+++L     +A    A     + +   A
Sbjct: 111 DPGLVDAHCNLGNLFK--AQGKLAAARRCYLEAIRLNPGFAIAWSNLAGIFKDEGQLSTA 168

Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
                +  ++ P P  A++Y++L        N V   +       +  +   +   +   
Sbjct: 169 IAYYREAIRLCP-P-FADVYSNLGSAMQEQGNFVEARQCYQTAIRLRPDFAIAHGNLGSC 226

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
            L       A      A+++ P
Sbjct: 227 LLASNDAKGAVRALRHAVQLEP 248



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 84/262 (32%), Gaps = 24/262 (9%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPD 186
               +  +  A +  +  +   P       +  L        D   A R    A+ + P+
Sbjct: 192 AMQEQGNFVEARQCYQTAIRLRPD--FAIAHGNLGSCLLASNDAKGAVRALRHAVQLEPN 249

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P      +   +       AI+          +     A   +  ++   D+G +  + 
Sbjct: 250 FPDAYN-NLGNALRKTFMREAISCYRTALHLKPD--HPHAYSNLGNAM--RDRGLVREAI 304

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
           H  + + +L  +   A       L  Q +  +A     +   ++  P+ A  YT+L    
Sbjct: 305 HCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALD--PDFAEAYTNL-GNA 361

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMKIA-PRKEIFLL 363
               +K      +I     E+   ++ +  + G+ + A    +  LA++   P     LL
Sbjct: 362 LDDAIKCYTTALKIAPGLAEAHAALAAVHGDGGNYEDAIMCYERALALRPHFPDAFAGLL 421

Query: 364 LAQIEQANSHNTDKILYWTQSA 385
            A+         D +  WT  A
Sbjct: 422 QAK---------DFVCDWTSRA 434


>gi|255325863|ref|ZP_05366955.1| DNA repair protein RadA [Corynebacterium tuberculostearicum SK141]
 gi|255297075|gb|EET76400.1| DNA repair protein RadA [Corynebacterium tuberculostearicum SK141]
          Length = 456

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 1/95 (1%)

Query: 395 ISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454
            S+ GY+S  WL   P   +    E + P  +    +  + +  +  + PA  +  +   
Sbjct: 11  CSECGYVSPKWLGRCPDCGSWGTLEERAPVVAGPGTAGTSASKGVAPSSPAQPITKIGAQ 70

Query: 455 GKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGI 489
             K     I ++     + I P    +    +PG+
Sbjct: 71  ATKTVRTGIGELDRVLGTGIVPGS-VVLMAGEPGV 104


>gi|91778084|ref|YP_553292.1| putative cellulose synthase operon protein C [Burkholderia
           xenovorans LB400]
 gi|91690744|gb|ABE33942.1| Putative cellulose synthase operon protein C [Burkholderia
           xenovorans LB400]
          Length = 1588

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 58/207 (28%), Gaps = 17/207 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL  A       L   PD P +  A+ + Y  A +   A+       +   +    
Sbjct: 711 RQRGDLAGAYDVIAPWLAAMPDNPDLQAALGRLYSTAGDDRNAVASYRVALQRKPDDLSL 770

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               + A +           +   A ++L              +   ++ K   A   L+
Sbjct: 771 LQATISAAAGAKQFS----YAESLATQALNAAPGDPGVLATVGRMYRAEGKLSLASTFLQ 826

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSK------ 333
           +       P +AN        + V +     ++R            E             
Sbjct: 827 RSLVAANTPLMANA--PRNPASNVPRGWEVAMRRIGATPLPGTNPFEGKTATVTPTDADN 884

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEI 360
            AL  GS + A A    +    P + +
Sbjct: 885 AALAGGSYNAARASLPYSQSSLPTQTV 911



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 88/274 (32%), Gaps = 35/274 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G M +A  +   A + +    ++   + + +  L+    A        A +    +    
Sbjct: 407 GEMLLANGDPVGAEQAYRMALRRQADNPDAVRGLVGALAAQGRGD--EALQFANQLNAEQ 464

Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            ++      +      +        GDL SA+     AL  +PD PW+   + + YV   
Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             + A + ++       +        L A +L +A+  D                + I  
Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQL--------DRIPL 572

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           +           ++  A   L+    V+   ++A       S  T   L      E +  
Sbjct: 573 A-----------QRTDAMTTLQHRLWVHQQADLAT--RMARSGQTQQALATLHAAEPVAG 619

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            S E + +++    + G  ++A      AM  AP
Sbjct: 620 NSPELIGVIAAAYQQAGDPNRALGLVRAAMNAAP 653



 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/199 (10%), Positives = 54/199 (27%), Gaps = 19/199 (9%)

Query: 97  AHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-- 153
           A +  + A    S+               L                + + M+Q  +T   
Sbjct: 218 AGDSTVGASAKKSWRQALLWLDARPSDAALYQAYLQTATDDAAVKARFDSMVQQDSTARA 277

Query: 154 ------EFAVYSLYFE----SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
                               +    D+ +A+   +  L  SP+       +    +  + 
Sbjct: 278 RAQENAAVDARGRAIADGFAALDRNDVATARAKFSSVLATSPNDTDALGGMGIAALKQER 337

Query: 204 WSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDMIASYHDAIESLKLCD 257
           ++ A   L +  +N        A+         + ++     G+   +      ++ L  
Sbjct: 338 FAEARNDLERASRNGNPARWKTALDSATYWTYTSDAIGARSNGEFAKAKSLFERAIALNP 397

Query: 258 NSIMASICAAKSLISQNKK 276
           + + A +   + L++    
Sbjct: 398 SDVTAQVLLGEMLLANGDP 416


>gi|83746558|ref|ZP_00943608.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
           UW551]
 gi|207742243|ref|YP_002258635.1| hypothetical protein RSIPO_00426 [Ralstonia solanacearum IPO1609]
 gi|83726692|gb|EAP73820.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
           UW551]
 gi|206593631|emb|CAQ60558.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 642

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 78/266 (29%), Gaps = 47/266 (17%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             + A   A   ++++P +    +      V   +WS     L  +        R  AIL
Sbjct: 138 APSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRADAIL 197

Query: 229 --------------------------------LIARSLENADKGDMIASYHDAIESLKLC 256
                                            +A +       D   +  +   +L+L 
Sbjct: 198 QLQQQMSKSNDPVGAVSALQRLTVHDAQRPETHLALARAKVVAKDNTGALSELDTALRLR 257

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKL 311
                A+I AA+ L + +    A   L    K  P     H  +A +Y  + ++N   + 
Sbjct: 258 PGYEDAAILAAE-LRADSNPDAAIAGLRTFLKAAPASLDGHLALARLYL-VNNQNDQARA 315

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI------FLLLA 365
           +    + +I        + +  + L+    D A       +  A +         +  LA
Sbjct: 316 Q-FEAIRKIAPNDARIPLALGLLNLQQRQYDAAERYLKEYIAQAAQSPSLSPEPGYQGLA 374

Query: 366 QIEQANSHNTDKILYWTQSALHAMPD 391
           Q+ +   H+    + W      A   
Sbjct: 375 QVAE-EKHDYAGAITWLDKIAGASNG 399



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 13/173 (7%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L Q  ++ +   R   I  + R+           +   A   ++L   S+ A       +
Sbjct: 116 LAQDTRDPRFAQRATEIAFLTRA--------PSQALTAARLWVELAPTSMPARQVQQLLM 167

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
           ++  +  + E +L+         + A+    L      S + VG +    RL   + +  
Sbjct: 168 VATGQWSEVEPMLQAQLNKVSPGQRADAILQLQQQMSKSNDPVGAVSALQRLTVHDAQRP 227

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           E+ + +++  +       A ++   A+++ P  E   +LA   +A+S+    I
Sbjct: 228 ETHLALARAKVVAKDNTGALSELDTALRLRPGYEDAAILAAELRADSNPDAAI 280


>gi|257075491|ref|ZP_05569852.1| TPR repeat-containing protein [Ferroplasma acidarmanus fer1]
          Length = 516

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 12/198 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
              D   A     +A+ I P    + +        + ++   I  L       +  +   
Sbjct: 21  EADDFAGALEAINRAISILPRNVDLHDFKSDILFHSGDFEETIKELE----FIETLDPGD 76

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A      SL     G+   +   A +++K+ ++   +    AK+L +  +   A      
Sbjct: 77  ASHYSMESLCYLQMGEDEKALELADKAIKVDNDYEFSYYNRAKALNNLGRTEDAISAYRL 136

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM-G 339
             + NP     H ++A +Y    +     +           K    +  ++ ++ L   G
Sbjct: 137 SLEKNPSDPDGHRDLAELYLDAGNYKMAER--ELKLSLRFRKNDKITNDLMVELKLATGG 194

Query: 340 SIDQAHAKAMLAMKIAPR 357
           + +   A        A  
Sbjct: 195 AFEFTKALLDAFKNTADT 212


>gi|15676254|ref|NP_273388.1| hypothetical protein NMB0339 [Neisseria meningitidis MC58]
 gi|7225559|gb|AAF40782.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984343|gb|EFV63317.1| tetratricopeptide repeat family protein [Neisseria meningitidis
           H44/76]
 gi|325132894|gb|EGC55571.1| hypothetical protein NMBM6190_0274 [Neisseria meningitidis M6190]
 gi|325134920|gb|EGC57552.1| hypothetical protein NMBM13399_0337 [Neisseria meningitidis M13399]
 gi|325138879|gb|EGC61429.1| hypothetical protein NMBES14902_0323 [Neisseria meningitidis
           ES14902]
 gi|325140988|gb|EGC63494.1| hypothetical protein NMBCU385_0299 [Neisseria meningitidis CU385]
 gi|325143053|gb|EGC65404.1| hypothetical protein NMB9615945_0384 [Neisseria meningitidis
           961-5945]
 gi|325199533|gb|ADY94988.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 109/356 (30%), Gaps = 67/356 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
              AR++   V  +   ++  L      ++     + + A      ML  P T       
Sbjct: 57  GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211
              L+  +      G ++ A++     L +     A    + ++  Y   ++W +A+   
Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256
                + + +    A      +     K +   +      A+E+ K C            
Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228

Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311
              +  A++  A + I Q       ++ EK         +   Y      E  + +L   
Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278

Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365
            +    L+ IN    +SL++  +         +A   A+  ++  P    ++ L    L+
Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            +  A   + D +       L      ++   + +  S    W    P       F
Sbjct: 331 DMNPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382


>gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110]
 gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110]
          Length = 458

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 54/165 (32%), Gaps = 9/165 (5%)

Query: 129 IALAERQYNIA-HEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                     A  +  E +   P   R +      ++     D + A   A +A+ + P 
Sbjct: 181 TYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVAD--AAEAIRLDPK 238

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P   +          ++ +AI   +Q  + A + N         R      KG+  A+ 
Sbjct: 239 VPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPKPN-----FFTNRGDSYQFKGEFGAAL 293

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D   +LKL  N        A       ++RKA    E   K++P
Sbjct: 294 SDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDP 338


>gi|109897526|ref|YP_660781.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
 gi|109699807|gb|ABG39727.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
          Length = 918

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 101/301 (33%), Gaps = 31/301 (10%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL+ +++ +      + S ++   T  +E    L   Q  +       A    +   
Sbjct: 400 LREGLVKLSSGDQSGIESLESAIAIDATL-SEAWSLL--AQAHMQANDSEQALSIAKRWQ 456

Query: 148 QIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +           L  ES    ++ +   A+    K L+++PD       ++      K +
Sbjct: 457 ETNQID-----GLVLESYLLQQLNNNVEARATLQKVLELAPDNYPAMRFLMLMNAREKRF 511

Query: 205 SRAITFLNQKK--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261
             A T   +     N  E      + +I  +++  D   +       +++          
Sbjct: 512 DEARTLAEKLLLSSNNAEGKFQLVLTIINLAIQQDDLKSIETLLQSLLDNRPTDVEEEPL 571

Query: 262 -ASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRA 314
              +  A     Q + +KA  +L+ I      + ++   E+   Y  +  ++        
Sbjct: 572 ELKVGLATIFNYQGEYQKALTVLKDIKNQKDFFVLS---ELGQTYIEM--DDFRNAKLTF 626

Query: 315 LRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
             L  I   +  S    + ++++  L + + + A ++A  A+   PR  +  + A I   
Sbjct: 627 ETLVNIFPRNTLSWNKQINLLNQYGLHVEAAELA-SRAETAIPHDPRLTVLNIRALIRAG 685

Query: 371 N 371
            
Sbjct: 686 E 686



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 39/103 (37%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +        + A    + +L +       + +    + R  ++  A   A +A+ I P+
Sbjct: 779 AEYYTRNGALDAAEIYYKGLLDMNPKDFVTLNNYSALAIRKEEIPLAIELAQQAIQIQPN 838

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           +P+  + +        ++S A+T++ +      + N     L+
Sbjct: 839 SPYAMDTLGWALFRNNQFSDALTYIKKANAELPKNNEITLHLI 881


>gi|332025552|gb|EGI65715.1| Anaphase-promoting complex subunit 7 [Acromyrmex echinatior]
          Length = 572

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 57/190 (30%), Gaps = 26/190 (13%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKA 180
              L  Q          A                 +   L  E  +  D   A  +   A
Sbjct: 320 ANTLTAQALNLNPNDIEATI---------------LRGNLLIEQKKYQD---ALFFFRHA 361

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P      + +V   V       A+   +   K      R   +L +  S+   D  
Sbjct: 362 VQLKPYRYEPHKGLVDCLVGMHRLREALNIASSSCKQLGHTTR---VLTLYASVLMKDPV 418

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIA 296
            +  + +   ++L   +  + A    A+    +     A  +LE+  +++     H  + 
Sbjct: 419 SVSKAKNLLEKALSQDEVYLPAVYLLAEIYEQEMNLEAAIELLERQVEIHSTCKLHQTLG 478

Query: 297 NIYTHLLSEN 306
           +++  + +E 
Sbjct: 479 DLWARMHNEE 488


>gi|22001528|sp|O82861|BCSC2_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|3298351|dbj|BAA31465.1| cellulose synthase subunit C [Gluconacetobacter xylinus]
          Length = 1326

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 85/289 (29%), Gaps = 26/289 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
              +  A + +  +  +   +   L+ L   ++ +A+     A + L   +      +  
Sbjct: 418 TGQVAAAEQEYRGILSREPNNQLALMGL--ARVDMAQGNTAEARQLLSR-VSPQYASQVG 474

Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              V  L   + +  D         +A+  +P  PWV   +        + + A   +  
Sbjct: 475 EIEVSGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQP 534

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS-ICAAKSLI 271
              N       +A +L      N      + +         L   +   A    A +  I
Sbjct: 535 ILANPVTAQDRQAGILYTYGSGNDAMTRQLLA--------GLSPADYSPAIRSIAEEMEI 586

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            Q+   +  ++       NP P I    +    + T  +      L     + V + + +
Sbjct: 587 KQDLASRLSMV------SNPVPLIREALS--QPDPTGARGVAVADLFRQRGDMVHARMAL 638

Query: 332 SKIALEMGSI--DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
              +     +  DQ  + A   MKI+       LLA +           
Sbjct: 639 RIASTRTIDLSPDQRLSYATEYMKISNPVAAARLLAPLGDGTGSGAGNA 687



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 12/161 (7%)

Query: 133 ERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             + + A +  +  LQI            L   S R GD   A RY  +A+   P     
Sbjct: 304 AGRLSAAEQSFQSALQINSHDADSLGGMGLV--SMRQGDTAEAHRYFEEAMAADPKTADR 361

Query: 191 TEAVVQQYVLAKEWSRAITFL------NQKKKNAKEWNR--NRAILLIARSLENADKGDM 242
               +    ++ +++     +        K+K A    +        +  +      G +
Sbjct: 362 WRPALAGMAVSGDYAAVRQLIAAHQYTEAKQKLATLARQPGQYTGATLMLADLQRSTGQV 421

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            A+  +    L    N+ +A +  A+  ++Q    +A  +L
Sbjct: 422 AAAEQEYRGILSREPNNQLALMGLARVDMAQGNTAEARQLL 462



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 110/351 (31%), Gaps = 57/351 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GLM+ A+     ARK+            +  V +        +     A   ++ +L  P
Sbjct: 480 GLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQPILANP 539

Query: 151 AT---REFAV---YSLYFESCRIG--------DLNSA-QRYATK-------ALDIS---- 184
            T   R+  +   Y    ++            D + A +  A +       A  +S    
Sbjct: 540 VTAQDRQAGILYTYGSGNDAMTRQLLAGLSPADYSPAIRSIAEEMEIKQDLASRLSMVSN 599

Query: 185 --PDAPWV----------TEAVVQQYVLAKEWSRAITFL------------NQKKKNAKE 220
             P                 AV   +    +   A   L            +Q+   A E
Sbjct: 600 PVPLIREALSQPDPTGARGVAVADLFRQRGDMVHARMALRIASTRTIDLSPDQRLSYATE 659

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIM-ASICAAKSLISQNKKRK 278
           + +    +  AR L     G    + +  + E ++      M  S+  +  L  +  + +
Sbjct: 660 YMKISNPVAAARLLAPLGDGTGSGAGNALLPEQMQTLQQLRMGISVAQSDLLNQRGDQAQ 719

Query: 279 AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A   L    + +P    P++A    +         L+  L +   N + +++     + A
Sbjct: 720 AYDHLAPALQADPEATSPKLALARLYNGHGKPGKALEIDLAVLRHNPQDLDARQAAVQAA 779

Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +       A   AM  ++ +P     +L +A  +QA+ H    I    + A
Sbjct: 780 VNSNHNSLATRLAMDGVQESPMDARAWLAMAVADQADGHGQRTIED-LRRA 829


>gi|255068440|ref|ZP_05320295.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
 gi|255047326|gb|EET42790.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 106/352 (30%), Gaps = 59/352 (16%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              AR++   + QQ   ++  L      ++     + + A    + +L  P T       
Sbjct: 57  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQALLDSPDT------- 106

Query: 160 LYFESCRIGDLNSAQRY-----ATKALDISPDA------PWVTEAVVQQYVLAKEWSRAI 208
              E         AQ Y       +A  I              + ++  Y   ++W +AI
Sbjct: 107 -VNEKRARVLFELAQNYQSAGLVDRAEQIFIGLQEGNMAREARQHLLSIYQQDRDWEKAI 165

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASIC 265
                   + + +    A      +     K ++ A+      A+++ K C     A++ 
Sbjct: 166 ETAQLLSHDEQTYQFEIAQFYCELAQTALFKSNLDAARYNVQKALDANKKCAR---ANMI 222

Query: 266 AAKSLISQNKKRKAEV---ILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRA 314
                  Q     A      +E+    +      ++   Y      E  + +L    +  
Sbjct: 223 LGDIETKQGNFPAAVEAYGAIEQQNHAYLSMVGEKLYEAYAAQGKQEEGLNRLIGYMQTF 282

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL----AQIEQ 369
             L+ IN        ++ + AL +    +A   A+  ++  P    ++ LL    + +  
Sbjct: 283 PDLDLIN--------VIYEKALLLKGESEAAQLAIDLVRQKPDLNGVYRLLGLKISDMNP 334

Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
           A   + D +       L      ++   + +  S    W    P       F
Sbjct: 335 AWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWETF 382


>gi|307183491|gb|EFN70290.1| Transmembrane and TPR repeat-containing protein 4 [Camponotus
           floridanus]
          Length = 485

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 81/212 (38%), Gaps = 14/212 (6%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK--KNAKEWNRNRAILLIARSLENADKGDM 242
           P A  +   ++   +  + W+R+  + N+K   ++A +     A +    +   AD GD+
Sbjct: 221 PKAALLAYIMLIILLFTRSWTRSSQWRNEKLLFQSALDVCPLNAKVHYNIAKNAADTGDI 280

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +  +  E+L+L  N   A       L    +  KA  + ++   +N   + A  + +L
Sbjct: 281 NLAKLEYQEALRLNPNYTQAMNNLGNLLRDDGQISKAINLFKQA--INLQKDFATAWMNL 338

Query: 303 -LSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            ++++++ + K +        +      +    +  + LE    D+A    + A +  P 
Sbjct: 339 GIAQSSLKQYKESETSYFMALQHRSNYPDCYYNLGILYLEQKQYDKALKAWINATRQKPT 398

Query: 358 -KEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
            +  +  +  +      +  K     + A  A
Sbjct: 399 HRRAWTNMILLLD----DLGKTEEALRMANTA 426


>gi|262199637|ref|YP_003270846.1| hypothetical protein Hoch_6484 [Haliangium ochraceum DSM 14365]
 gi|262082984|gb|ACY18953.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
            14365]
          Length = 1257

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 64/208 (30%), Gaps = 11/208 (5%)

Query: 93   MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-----HEKLEMML 147
            +++       AR++   V        E  V +    +A A      A           + 
Sbjct: 965  LALDTGERRAARRILERVLGDEADAVEPAVLIEAAHVATASGALADAQGFLDRAAAGELS 1024

Query: 148  QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                            + R G L+SA      A   +P        ++   +  +E  +A
Sbjct: 1025 GPAQVALARERG--HLALRRGTLDSAVEQLALAHAGAPSDGEAALLLIDARLQREELEQA 1082

Query: 208  ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----NSIMAS 263
                +     A     ++ +     ++   +       +  A+ +L+           A 
Sbjct: 1083 QAVADALAATAGTSPASQHLAAGLLAMAKREFDTAQERFDQAVAALEEAQATPRQFARAH 1142

Query: 264  ICAAKSLISQNKKRKAEVILEKIWKVNP 291
            I A ++L   ++ R A   LE+  +++P
Sbjct: 1143 ILAGRALFQADELRDASKALERAIRLDP 1170



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 109/294 (37%), Gaps = 20/294 (6%)

Query: 93   MSIAAHNIPLARKMHSYVSQQH-TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
            M++A++ +  ARK    VS              L  ++ LA    + A E LE  L +  
Sbjct: 790  MALASNALAPARKALIDVSDLQERIAGSPAALGLRGRVHLALDDLDSAAEDLEAALALLP 849

Query: 152  TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                A  +L   + R G    A  +    L  +  +  +  A       +  + RA   L
Sbjct: 850  GDLAATQALAQVALRRGAPRDAVEFLEP-LMSAGASAEIQLAFATALRRSGAFERAAEVL 908

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS---ICAAK 268
            +   K  +   R    +++ R+    D+GD   +  + I + +    +  A+   I AA+
Sbjct: 909  DTMAKADEPEPR----VMLERARLARDQGDWDRARREFIAAAERVPGTPTATEAIIDAAR 964

Query: 269  SLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLEEI 320
              +   ++R A  ILE     +   V P   I   +    S    +  G L RA   E  
Sbjct: 965  LALDTGERRAARRILERVLGDEADAVEPAVLIEAAHVATASGALADAQGFLDRAAAGELS 1024

Query: 321  NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQAN 371
                V        +AL  G++D A  +  LA   AP      + L+ A++++  
Sbjct: 1025 GPAQVALARERGHLALRRGTLDSAVEQLALAHAGAPSDGEAALLLIDARLQREE 1078


>gi|94968248|ref|YP_590296.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550298|gb|ABF40222.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 609

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 5/134 (3%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKN 217
            L FE  + GD   A+R    A+ + P+  W     +    +    W+ A  F  +  + 
Sbjct: 466 HLAFEVYKRGDAADAERLYKHAVALGPN-DWPANFGLAMIEMRMSNWNEADRFFQRAIEI 524

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           +   +    +L   ++    +     A+     E++    N     +  A+ L  Q +  
Sbjct: 525 SPSVSNGSYLL---QARVRVEMQHYDAAEKSVREAIDNWPNIASQHLLLAQILTKQGRIE 581

Query: 278 KAEVILEKIWKVNP 291
           +A    +K   +NP
Sbjct: 582 EARSEYQKELTLNP 595



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 62/171 (36%), Gaps = 13/171 (7%)

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           WS  +    +    A       + L    + E   +GD   +      ++ L  N   A+
Sbjct: 443 WSNNLALFLRGVDVAPNSTPAYSHL----AFEVYKRGDAADAERLYKHAVALGPNDWPAN 498

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRL 317
              A   +  +   +A+   ++  +++P      +   A +   +   +   K  R   +
Sbjct: 499 FGLAMIEMRMSNWNEADRFFQRAIEISPSVSNGSYLLQARVRVEMQHYDAAEKSVR-EAI 557

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367
           +          +++++I  + G I++A ++    + + P      + LA+I
Sbjct: 558 DNW-PNIASQHLLLAQILTKQGRIEEARSEYQKELTLNPTSTEARMGLAEI 607


>gi|262305033|gb|ACY45109.1| acetylglucosaminyl-transferase [Scutigera coleoptrata]
          Length = 290

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVAEAEECYNTALRLCPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A E     L++  T   ++ +L       G    A R   KAL++ P+
Sbjct: 27  ANALKEKGQVAEAEECYNTALRLCPTHADSLNNLANIKREQGFTEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYESRMKKLVAIVADQLDKNRLPSVHPHH 236


>gi|254430727|ref|ZP_05044430.1| TPR repeat containing Spindly family protein [Cyanobium sp. PCC
           7001]
 gi|197625180|gb|EDY37739.1| TPR repeat containing Spindly family protein [Cyanobium sp. PCC
           7001]
          Length = 1107

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 14/141 (9%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKAL 181
           L    A  + +++ A  + E      A      Y L+         GD     R   +AL
Sbjct: 359 LAGVAAHMQGRHDEAIRRFEA---AQAAGFLTPYLLFNAGNACRSRGDTGEGLRLYREAL 415

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + PD P     +    + A     A   L    ++   W+          + + A+   
Sbjct: 416 ALLPDFPECRHNLALGLIEAGRPEEAEATLRLLLRDQPSWH--------QAAFQLANLLR 467

Query: 242 MIASYHDAIESLKLCDNSIMA 262
                 +A+E+ +LC     A
Sbjct: 468 SQRREAEAVEAFRLCLQFAPA 488


>gi|238757379|ref|ZP_04618565.1| Cellulose synthase protein C [Yersinia aldovae ATCC 35236]
 gi|238704418|gb|EEP96949.1| Cellulose synthase protein C [Yersinia aldovae ATCC 35236]
          Length = 1111

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 27/237 (11%)

Query: 73  FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIA 130
                ++   +GY  L   + +    N   A    + +            L + L V   
Sbjct: 143 RLYFGQQKDAQGYAMLEK-VAADPVGNADAAELWMNTIKAMAVSPQSVAALTHFLGV--- 198

Query: 131 LAER-QYNIAHEKL---EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            +   Q + A + L   + ML  P    R   +          G   +A     +AL +S
Sbjct: 199 FSSGPQADSARKTLASQQAMLADPAYQARLSGL-----AKVDSGGGTAAIPALKQALAVS 253

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW----------NRNRAILLIARSL 234
           P+ P +  A+   Y  + +  +A+    Q +K  K+             NR  LL     
Sbjct: 254 PNDPELLGALGLAYARSGDRVQALRLFEQAQKADKDGLNSDKWTSLIKTNRYWLLSDEGD 313

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +    GD   +     ++ ++  +   A I      ++++  + AE   ++  ++ P
Sbjct: 314 KALKAGDTARALQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLEP 370



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 74/208 (35%), Gaps = 18/208 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLL----------EVQIALAERQYNI 138
           GL    + +   A ++     +  +   +++    L+          E   AL       
Sbjct: 264 GLAYARSGDRVQALRLFEQAQKADKDGLNSDKWTSLIKTNRYWLLSDEGDKALKAGDTAR 323

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   QI  +  +A+  L   +    D  SA++Y  +AL + P        +   Y
Sbjct: 324 ALQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLEPSNSSAVRGLANIY 383

Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  +A+++LN     Q+       N  +  +L  ++   A +     +     ++ 
Sbjct: 384 QRESP-QKALSYLNSLPRSQQTNMRDTSNSLQLDILKQQAEALAAQQQWHQAAQKYRQAQ 442

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           K+  + +  +   A++L       +A+ 
Sbjct: 443 KMAPDDVWITYRLAQALEQDKHLPEADA 470



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 102/314 (32%), Gaps = 54/314 (17%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESC 165
            Y   Q    ++  +     Q    ++    A  +   + ++     ++   Y+LY  S 
Sbjct: 437 KYRQAQKMAPDDVWITYRLAQALEQDKHLPEADAQFRQLAKLKPGDPQQVYAYALYLSST 496

Query: 166 RIGDLNSAQRYATKALDISPDAPW-----------VTEAVV---QQYVLAKEWSRAITFL 211
              D  +    A       P A W             + V+   +Q   A + + AI  L
Sbjct: 497 NR-DSQALAHLA-----TLPTAQWNDNIRELDKRLKLDQVLTQARQQRAAGDEAGAIAIL 550

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +Q+       N    + L   +LE  D  + +  Y           +   A +   ++ I
Sbjct: 551 HQQ----PPANTQIDLTLADWALERGDYSEALTGYQHVRAREPQNPD---ARLGEIEAYI 603

Query: 272 SQNKKRKAEVILEKI------WKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKES 324
           ++ +  +A   L+          +N    +AN +  +   +      +R          S
Sbjct: 604 AEGRLSEARQHLQTEPLSTEGASLNTQRRVANAWRDVGEPQQAADIFQRLKPAAAKGGVS 663

Query: 325 VESLVIV---SKIALEMGSIDQAHA---KAMLAMKIAP----RKEIFLLLAQIEQANSHN 374
            E+ +++   +++A   G    A      AM+A  I P      + + LL    +  + +
Sbjct: 664 QENALLLRDSARLAQSQGQPVAAQEDYKHAMVASGITPILPADNDSYTLLT---RNQATD 720

Query: 375 TDKILYWTQSALHA 388
                 W +  + +
Sbjct: 721 D-----WLKRGVRS 729


>gi|284053977|ref|ZP_06384187.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 532

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 19/242 (7%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           ++N A +  +  +++      + ++L +   +  D   A     KA+++ P+  W    +
Sbjct: 145 RWNEAADAYQNAIKLKGDFALSHHNLGYILVKKEDWEGAIAAYQKAIELDPNFVWSHYNL 204

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS-YHDAI--- 250
               V  +EW  AI+      K      +    L  A   +     + I+  YH AI   
Sbjct: 205 GDILVKKEEWEGAISAYRSAVKIDPNLPQFHEKLGEALRNQIQISSEEISQVYHRAIKDN 264

Query: 251 --------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--VNPHPEIANIYT 300
                   ++L++       S+  A  L  Q K  +A    +   +   N H   A  + 
Sbjct: 265 PTDLQLYYKALEVNPKDAEISLKLADVLKEQGKIEQAITFYKSTLQIDSNNHEIQAVAWH 324

Query: 301 HLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            L             +K   ++ E+  E   S   + ++  ++G + +A      A+KI 
Sbjct: 325 RLGDIFKQLGRLQEAIKAYQQVVELKPEWAGSHFNLIRVLRQLGRLQEAEKAGNRAVKIE 384

Query: 356 PR 357
           PR
Sbjct: 385 PR 386



 Score = 43.4 bits (101), Expect = 0.095,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 71/209 (33%), Gaps = 28/209 (13%)

Query: 158 YSLYFESCRIGDL--NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
             L  ++    +    +AQ Y   A+ ++P+  W    +    +  + W+ A        
Sbjct: 99  RHLLGDALSKLEQWSEAAQAY-QNAIALNPEFSWSHNNLGDALLKLERWNEAADAYQNAI 157

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   ++    A+           K D   +     ++++L  N + +       L+ + +
Sbjct: 158 KLKGDF----ALSHHNLGYILVKKEDWEGAIAAYQKAIELDPNFVWSHYNLGDILVKKEE 213

Query: 276 KRKAEVILEKIWKVNP-----HPEIANI---------------YTHLLSENTVGKLKRAL 315
              A        K++P     H ++                  Y   + +N    L+   
Sbjct: 214 WEGAISAYRSAVKIDPNLPQFHEKLGEALRNQIQISSEEISQVYHRAIKDNPTD-LQLYY 272

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQA 344
           +  E+N +  E  + ++ +  E G I+QA
Sbjct: 273 KALEVNPKDAEISLKLADVLKEQGKIEQA 301


>gi|149377996|ref|ZP_01895721.1| TPR repeat protein [Marinobacter algicola DG893]
 gi|149357705|gb|EDM46202.1| TPR repeat protein [Marinobacter algicola DG893]
          Length = 582

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 88/291 (30%), Gaps = 37/291 (12%)

Query: 99  NIPLARKMHSYVS-QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           +   A         +   F  E L  LL  +IA    ++++       M     +R+  V
Sbjct: 36  DDATASSAEPSADIRYADFEPEELYLLLSGEIAAQRGRFDVTLVNY--MKAAQQSRDLGV 93

Query: 158 YS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213
                  +  +   N+ Q+ A   L+++PD          Q V   E   A+  + +   
Sbjct: 94  IERTMRIAQSLNADNAQQKLAALWLEVAPDNMQAHRISAIQAVKKNELETALGHMEKIMD 153

Query: 214 -----------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI---------ESL 253
                               + + +L + + LE     +    Y  A+         ++L
Sbjct: 154 LGGDADFDSLAAMAGNLPPEQQQELLDLYQQLEQRHPDNPELQYSIALLLKVTGEPQQAL 213

Query: 254 -------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LL 303
                      +   A I     L   N+K++A   L    +  P + ++  +Y    + 
Sbjct: 214 AKLEPLLDSKPDFQPALILKGDLLYQTNQKQQALDHLRANTRQFPDNRQMGTLYGRMLIG 273

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                       RL     +     +  + +ALE   I  A  +    ++ 
Sbjct: 274 EGELQTAQNEFRRLVNRFPDVPGLRLSYALVALENDQIALAKEELTRLIEQ 324


>gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1]
 gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila
           RKU-1]
          Length = 357

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286
           L   +LE AD+     ++      L + +N   A       L+ Q K  +    L+K   
Sbjct: 100 LYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLDKAVE 159

Query: 287 ---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
              W V  +  +   Y +L   +    +    R  E N     +  ++++   EM   D 
Sbjct: 160 IDPWLVQAYASLGEAYYNL--GDYEKAIHYWERELEYNPNDKITYFMITEAYYEMNRKDL 217

Query: 344 AHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
           A       ++I P        L+Q+ +    N +K   
Sbjct: 218 AVKALERLLEIDPDNIPALYQLSQLYR-ELGNEEKARE 254



 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 83/246 (33%), Gaps = 36/246 (14%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD--ISPD-APW 189
           E  + +     E M +           +  E      L           +  I P+   W
Sbjct: 33  EGDWELLK---EDMKKKEN--------IMKEVQTCEKLEKVVHLDETVYEPLIFPEFQEW 81

Query: 190 VTEAV-----VQQYVLAKEWSRAITFLNQKKKNAK--------EWNRNRAILLIARSLEN 236
           + E        +   L   +  A+ + ++   +          + + N A     +    
Sbjct: 82  LREENITPKDFKNVSLKGLYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLL 141

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294
            ++G +        +++++    + A     ++  +     KA    E+  + NP+ +  
Sbjct: 142 VEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPN-DKI 200

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               I   Y  +  ++    +K   RL EI+ +++ +L  +S++  E+G+ ++A      
Sbjct: 201 TYFMITEAYYEMNRKDLA--VKALERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEEK 258

Query: 351 AMKIAP 356
            M   P
Sbjct: 259 IMNCKP 264


>gi|147921279|ref|YP_684907.1| hypothetical protein RCIX74 [uncultured methanogenic archaeon RC-I]
 gi|110620303|emb|CAJ35581.1| hypothetical protein RCIX74 [uncultured methanogenic archaeon RC-I]
          Length = 218

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 3/161 (1%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A +  + +L++        Y         GDLN+A     +AL + P+     + 
Sbjct: 23  GDSREAVKCFDRILKLNPDSISGWYGRGLAMKASGDLNAALECFDRALSLDPELTEAWQE 82

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAI 250
               Y  A     AI   +        +     ++ + L  +++E+ D      S     
Sbjct: 83  KGLVYQSAGNIDGAILCFSCAVGIDPLYAPGWFSKGLALQEKAMESEDYELFRESAECFE 142

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +LK+      A      SL+   + ++A    + + + +P
Sbjct: 143 CALKMSPGMTEAWFGRGVSLLMLGQPQEAVRCFDHVIESDP 183


>gi|327539622|gb|EGF26230.1| TPR repeat-containing protein [Rhodopirellula baltica WH47]
          Length = 631

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 88/267 (32%), Gaps = 16/267 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            +     K  S   +      + L   YLL       +    +A    + +   P+  E 
Sbjct: 205 GDEERIAKATSAAIKLLQDDPKELSTAYLLRAMT-QDKTDDQLADLT-KAIELDPSNAEA 262

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            V        + GD + A     K L++ P    +  A VQQ V       A+  L++  
Sbjct: 263 -VRQRAGLRMQEGDFDKAVEDLQKVLELDPTNEQIAAATVQQLVELDRADDALELLSKTI 321

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +        R   L+  +++  D      +  D  ++L +     +A +  A+  + ++ 
Sbjct: 322 QARPSEGLYRLRALLYTNMDREDD-----ALADLNKALAMQPKDPIALLQRAEISLRRDD 376

Query: 276 KRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            + A+  L+    + P  E      +   +  +        +     L + + + V   +
Sbjct: 377 VKDAKRDLDAAIDLAPQVEQLDQAIVVRCFIAVEEGRMADAINDMKILIDRSPDDVYRQL 436

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
            ++ + L+     QA       +   P
Sbjct: 437 QLANLYLQDDRPRQAIDMLSGVLDRDP 463



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 55/138 (39%), Gaps = 11/138 (7%)

Query: 230 IARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLI----SQNKKRKAEV 281
           +A ++        +    +A+    ++++       A +  A+  +     + +  KA  
Sbjct: 156 LAGAMTRMRGRRALQVRDEALRVLDQAIENDPELAEAHMLIARLNLLPDGDEERIAKATS 215

Query: 282 ILEKIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              K+ + +P  E++  Y    +  + T  +L    +  E++  + E++   + + ++ G
Sbjct: 216 AAIKLLQDDPK-ELSTAYLLRAMTQDKTDDQLADLTKAIELDPSNAEAVRQRAGLRMQEG 274

Query: 340 SIDQAHAKAMLAMKIAPR 357
             D+A       +++ P 
Sbjct: 275 DFDKAVEDLQKVLELDPT 292


>gi|308160490|gb|EFO62977.1| Hypothetical protein GLP15_191 [Giardia lamblia P15]
          Length = 315

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 82/217 (37%), Gaps = 39/217 (17%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G+   A   A +AL +  + P V +++ + + +A ++ +A +   +       ++ 
Sbjct: 31  KLEAGNFTKALAIAERALPLC-NQPSVLDSLGEIFSVAGDFQKATSCYAKAL----GYDH 85

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN---KKRKAE 280
                 +         GD                    A++ +A  +  ++   ++ ++ 
Sbjct: 86  LTHAAGLRYMTLYEITGD-------------------PANLNSAIGIFRKHTSTEESRSS 126

Query: 281 VILEKIWKVNPHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +IL           +A+ Y   L   +T   ++ A     IN   +E  + ++   L   
Sbjct: 127 LILALA-------TLADAYLTRLDPPDTKAAIRAAKEAIGINPSYIEPHISLAGAYLVAE 179

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
           S D A   A+ A+K+  ++ ++    +IE+A   + +
Sbjct: 180 SFDLAEKAALCALKLMEQRGLY----KIERAEDGSEE 212


>gi|32474397|ref|NP_867391.1| hypothetical protein RB6671 [Rhodopirellula baltica SH 1]
 gi|32444935|emb|CAD74937.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 281

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 80/238 (33%), Gaps = 16/238 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +  + +A       L +    + A   +     + G    A  +  KA+ +S   P   +
Sbjct: 3   QGDWTVAETLFTEALDVSNVNDAAHRGMSESLWQKGHREEAIAHLEKAVQLSAGDPKHMQ 62

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + Y+       A     ++ + A + +R  A L          + +   +      +
Sbjct: 63  RLGRMYLEVGRVDEA----ARQCQIALDSDREWAALWALWGDCQVARNEKDEALSAYHRA 118

Query: 253 LKLCDNSIMASICAA----------KSLISQNKKRKAEVILEKIWKV-NP-HPEIANIYT 300
           L L  +     +  A          + L + ++ R+   ++  + +   P   ++     
Sbjct: 119 LSLQPDYPYVQLRTAEIYHQQKRYDRLLATLDRLREDTEVVGDVDEAIRPGAADLLRGIA 178

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                 T   ++  +   + N E   S + ++ IA+E G  + A      AM++ P  
Sbjct: 179 MRELGRTEESVQYFIASAQKNPEDATSRLQLASIAVETGQPEIAQTWLAQAMRLDPSA 236


>gi|197118152|ref|YP_002138579.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197087512|gb|ACH38783.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem]
          Length = 882

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/247 (10%), Positives = 71/247 (28%), Gaps = 9/247 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +A    + A E+   ++            L      + ++ +A     KA+     + 
Sbjct: 639 AYVAMNDSSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSV 698

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A+   Y   KE+ +A+      ++   +    +  +               A    
Sbjct: 699 EARIALGNLYQGTKEYDKALASYQYAQRMNPDSVAAQFAIGALYDSTGKKNQAADAYRAV 758

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSE 305
             ++ +        +   A        K +A  +    +K  P +P + +   Y    + 
Sbjct: 759 LQKNDRYVPALNNLAYLCADGY---GSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNG 815

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM---KIAPRKEIFL 362
            +   +K   R   +          +       G   ++      ++   +    K    
Sbjct: 816 RSADAVKVMERAVALLPNDPTVRYHLGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQT 875

Query: 363 LLAQIEQ 369
           LLA++++
Sbjct: 876 LLAELKR 882



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 48/152 (31%), Gaps = 12/152 (7%)

Query: 126 EVQIA-----LAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATK 179
             Q A      +  + N A +    +LQ       A+ +L Y  +   G    A R A  
Sbjct: 733 AAQFAIGALYDSTGKKNQAADAYRAVLQKNDRYVPALNNLAYLCADGYGSKEEALRLAIS 792

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A    P  P V + V          + A+  + +           R  L +A  L     
Sbjct: 793 AFKQQPGNPGVMDTVGYALAKNGRSADAVKVMERAVALLPNDPTVRYHLGLAYYL----A 848

Query: 240 GDMIASYHDAIESLKL--CDNSIMASICAAKS 269
           GD   S     +SL L    ++  A    A+ 
Sbjct: 849 GDRARSEQALQKSLSLGQSPDTKAAQTLLAEL 880



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 11/240 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +   A  +   A ++   +L    TR+  +  L   +   G       YAT+ L   P 
Sbjct: 64  AKAYAALGKNEQAEKEFTKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQYLAKHPG 123

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           A    EA     +++K+   A  +  Q  K     + +R+   +  +  +   GD   + 
Sbjct: 124 AVDGLEAAGISCLVSKKHQEAREYFTQALK----VDPSRSATKLELASLDMATGDTERAK 179

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTH 301
               E +     +  A    A    +     KA V+ +KI +++ +  +A      +Y  
Sbjct: 180 ALLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVLALYKLGLLYLE 239

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               +     +RA ++ +   +  +   +    A      D A      ++K++P  E +
Sbjct: 240 RGEVDKAD--QRADQMIKAFPKKGDGYRLKGLAAFYRKRFDDAITSLQQSVKLSPTLEAY 297


>gi|167525922|ref|XP_001747295.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774130|gb|EDQ87762.1| predicted protein [Monosiga brevicollis MX1]
          Length = 826

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 79/269 (29%), Gaps = 61/269 (22%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----------------LYFESC 165
           V +L  +  +    Y+ A +      +    R   +                  L  E  
Sbjct: 583 VQVLLGRAYMELADYDAAEQAFRSARRFEKHRLSGLEYYSTVLWHMAKITDLAYLANEVM 642

Query: 166 R----------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                        + + A +Y  +A+ + P   +    +  ++    +  RA     Q  
Sbjct: 643 TIDPKHAVSCLQKEADRACQYFQRAVQLDPTFAYAYTLLGHEFSANNDHERAQACFRQAL 702

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                 NR          +  A +  ++ +    I + ++  +S +      K L  + +
Sbjct: 703 AQ----NRRLYNAWFGLGMLAARQERLVEAEKQLILATRINPSSPILRCHLGKVLGMRGR 758

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
              A  +L+K +++ P             EN + +  RA  L  +N              
Sbjct: 759 FVLALRVLDKAYEMAP-------------ENPLVRYTRASMLISLN-------------- 791

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
                  +A  +    +  AP++ +   +
Sbjct: 792 ----RYPEALTELEKLLVDAPKESVVYFM 816


>gi|157114867|ref|XP_001652461.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti]
 gi|108877167|gb|EAT41392.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti]
          Length = 381

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 83/291 (28%), Gaps = 27/291 (9%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L  +L  Q      ++  A E L+  L   P   +   Y+L        D   A     K
Sbjct: 51  LGSVLSAQ-----GRHQEAKEALKAALSYRPNMADV-HYNLGILLQNQQDYEEAVESFRK 104

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-------KKKNAKEWNRNRAILLIAR 232
           A+   P        +    +       A + L +         ++    +  R   L+  
Sbjct: 105 AIQFRPSLALAYLNLGTSLIALGRCQEAASVLREGSKLDGVGLRDRAAHDNARISALLQL 164

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKV 289
               AD+G +  +     E+L +  +         +        N+  +AE       + 
Sbjct: 165 GNLYADQGKLQRALAVYREALHILPDRYPPQGIYHRLGEVFARLNQWSEAERFQRAALEA 224

Query: 290 NP-----HPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            P     H    ++       +       KRALRL              ++    +    
Sbjct: 225 QPDHIAAHISYGSMLARNSSRTSEAEQWFKRALRLA---PADASVHHHYAEFLASVRRTA 281

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
           +A    + A ++AP     +  A           +   W + A+   P+  
Sbjct: 282 EACQYRVKAAELAPDDYSLVTAAASALRLLDRKVEAERWYRQAVTLRPEEA 332


>gi|11467562|ref|NP_043708.1| photosystem I assembly protein Ycf3 [Odontella sinensis]
 gi|1351777|sp|P49525|YCF3_ODOSI RecName: Full=Photosystem I assembly protein ycf3
 gi|1185257|emb|CAA91740.1| ORF179 [Odontella sinensis]
          Length = 179

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 15/141 (10%)

Query: 126 EVQIALAERQYNIA-HEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
               A +E +Y  A     E +   + P  R + +Y++       G+ + A  Y  +AL+
Sbjct: 35  AGMSAQSEGKYAEALENYYEALQLEEDPYDRSYTLYNIGLIYGNNGNYSQALEYYHQALE 94

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++ + P     +   Y         +  L  + ++     RN   L +  + E  DK   
Sbjct: 95  LNSNLPQALNNIAVIYHSQG-----LNALQMQNQDKNLEIRNDEYLEL--AKEFFDK--- 144

Query: 243 IASYHDAIESLKLCDNSIMAS 263
             +     ++LKL  ++   +
Sbjct: 145 --AAEYWRQALKLAPDNYPGA 163


>gi|193062647|ref|ZP_03043741.1| tetratricopeptide repeat protein [Escherichia coli E22]
 gi|193069957|ref|ZP_03050905.1| tetratricopeptide repeat protein [Escherichia coli E110019]
 gi|194425776|ref|ZP_03058332.1| tetratricopeptide repeat protein [Escherichia coli B171]
 gi|260843628|ref|YP_003221406.1| hypothetical protein ECO103_1443 [Escherichia coli O103:H2 str.
           12009]
 gi|192931769|gb|EDV84369.1| tetratricopeptide repeat protein [Escherichia coli E22]
 gi|192956710|gb|EDV87165.1| tetratricopeptide repeat protein [Escherichia coli E110019]
 gi|194415831|gb|EDX32097.1| tetratricopeptide repeat protein [Escherichia coli B171]
 gi|257758775|dbj|BAI30272.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|323162357|gb|EFZ48212.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQIYITRQLQRHPTMRVFHKLM 322


>gi|149917256|ref|ZP_01905755.1| hypothetical protein PPSIR1_40275 [Plesiocystis pacifica SIR-1]
 gi|149821863|gb|EDM81257.1| hypothetical protein PPSIR1_40275 [Plesiocystis pacifica SIR-1]
          Length = 439

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 44/164 (26%), Gaps = 16/164 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A+K     +      ++ L           E       +  + M+          
Sbjct: 49  GEGSAAKKGGDAKAAALHPDDQELAD--RRSKDQLEHDPAAVKKTHDEMVA--------- 97

Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             L  E+ +    GD  +A       L + P          +    A +W  A+      
Sbjct: 98  --LLAEARKLGEAGDTEAAVAKYEALLKLDPHYRPALIEAGELEAKAGDWVAAVHHTKLA 155

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
            K   + +  +  LL         +G    + H   E+L L  +
Sbjct: 156 AKLTADDDAMKVTLLDRVGQYAEKEGKNNDAAHYYREALALKPD 199


>gi|315050516|ref|XP_003174632.1| bimA protein [Arthroderma gypseum CBS 118893]
 gi|311339947|gb|EFQ99149.1| bimA protein [Arthroderma gypseum CBS 118893]
          Length = 804

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 72/202 (35%), Gaps = 17/202 (8%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDA--P 188
            +  ++ A    +   Q+   R    Y+L   E     + + AQ     A++ +      
Sbjct: 591 LQGDHDQALRCFKRATQVDP-RFAYGYTLQGHEYMSNEEYDKAQDAYRYAINANARHYSA 649

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W     V +          + F  Q  + A   N    +L+ +  L    + ++ A+   
Sbjct: 650 WYGLGKVYER------MGKLKFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQ 703

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLL 303
              +  L  +S++A +  A++L+  N+   A     +L+ +    P  H  +  +Y  + 
Sbjct: 704 YSRASSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQ 763

Query: 304 SENTVGKLKRALRLEEINKESV 325
            +     +K       ++ ++ 
Sbjct: 764 DKGNA--IKHFTTALNLDPKAA 783


>gi|299472683|emb|CBN78335.1| flagellar associated protein [Ectocarpus siliculosus]
          Length = 1318

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 98/343 (28%), Gaps = 58/343 (16%)

Query: 93  MSIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           + +A      A   +   +S         +  L++  +   E +   A E  E  L++P+
Sbjct: 522 VHLAQGRCRAASNSLEQALSFSFRVGKNPVFLLVKASVQKEEGKLEEALETFEEALRLPS 581

Query: 152 TR-------------------------------EFAVYSLYFESCRIGDLNSAQRYATKA 180
            R                                     +  +  R      A     +A
Sbjct: 582 VRGSTLGGSAPATRGGTVGTALSSFTDGEKAAIFSGAVGVLAKLKR---TAEATELVKEA 638

Query: 181 LDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           + +    P   + VV   +  +   ++ +A+  L      +  + R +++          
Sbjct: 639 MAMFRGTPDEVQIVVANSELAIERGDFEKALKILGDVPPESPAYVRVQSVKATIYLTLRR 698

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292
           DK      Y D  ++       +       ++ +       A    E     +P      
Sbjct: 699 DKRAYAQCYRDMAQANPSAATYV----LLGEAYMRIQMPEAAIESFEIALDTDPSDSSLA 754

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +I        + +    ++   +       SV     ++++ L++G  + A      A+
Sbjct: 755 GQIGRALVS--THDYRRAVEYYRKALRGQPRSVPLRHDLARLCLKLGRYEDASGVLQQAL 812

Query: 353 KIA--------PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
                         +  L+LA++ +A + + ++       A  
Sbjct: 813 IEDSSDVEDMKADVQTLLILAEVHEA-TGDDNQADSSLARASE 854



 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 51/311 (16%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             LL  + + +  Q ++A + L+ +L +    E A           G   +A     +AL
Sbjct: 481 ARLLMARASYSTGQADLAQQTLQELLAMDPALEDAHLLAAQVHLAQGRCRAASNSLEQAL 540

Query: 182 DISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKK----------NAKEWNR----- 223
             S         ++          +   A+    +  +           +    R     
Sbjct: 541 SFSFRVGKNPVFLLVKASVQKEEGKLEEALETFEEALRLPSVRGSTLGGSAPATRGGTVG 600

Query: 224 ---------NRAILLIARSLENADKGDMIASYHDAIESL---KLCDNSIMASICAAKSLI 271
                     +A +        A       +     E++   +   + +   +  ++  I
Sbjct: 601 TALSSFTDGEKAAIFSGAVGVLAKLKRTAEATELVKEAMAMFRGTPDEVQIVVANSELAI 660

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-----TVGKLKRA-----LRLEEIN 321
            +    KA  IL  +   +P       Y  + S       T+ + KRA       + + N
Sbjct: 661 ERGDFEKALKILGDVPPESP------AYVRVQSVKATIYLTLRRDKRAYAQCYRDMAQAN 714

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--NSHNTDKIL 379
             +  + V++ +  + +   + A     +A+   P      L  QI +A  ++H+  + +
Sbjct: 715 PSAA-TYVLLGEAYMRIQMPEAAIESFEIALDTDPSDSS--LAGQIGRALVSTHDYRRAV 771

Query: 380 YWTQSALHAMP 390
            + + AL   P
Sbjct: 772 EYYRKALRGQP 782


>gi|196006385|ref|XP_002113059.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
 gi|190585100|gb|EDV25169.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
          Length = 996

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 20/205 (9%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L   +    D         +A+++ P+ P     +        + + A    N     
Sbjct: 251 QGLMDLAV---DTYK------RAIELQPNFPDAYCNLANALKELGKVTEAEECYNTALSL 301

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   A  L   +    +KG +  +     ++L++      A    A  L  Q K +
Sbjct: 302 CPT----HADSLNNLANIKREKGQIGEASKLYRKALEIFPEFAAAHSNLASVLQQQGKLQ 357

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332
           +A    ++  ++N  P  A+ Y+++ +     ++  G ++   R  +IN    ++   ++
Sbjct: 358 EALAHYKEAIRIN--PSFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPNFADAHSNLA 415

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
            I  + GSI +A A    A+K+ P 
Sbjct: 416 SIHKDSGSIPEAIANYRTALKLKPD 440



 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 70/251 (27%), Gaps = 29/251 (11%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GLM +A         + +Y        N    Y           +   A E     L +
Sbjct: 251 QGLMDLA---------VDTYKRAIELQPNFPDAYCNLANALKELGKVTEAEECYNTALSL 301

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   ++ +L       G +  A +   KAL+I P+       +        +   A+ 
Sbjct: 302 CPTHADSLNNLANIKREKGQIGEASKLYRKALEIFPEFAAAHSNLASVLQQQGKLQEALA 361

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  +    +    A           +  D+  +      ++++  N   A    A  
Sbjct: 362 HYKEAIRINPSF----ADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPNFADAHSNLASI 417

Query: 270 LISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVG-KLKRA--------- 314
                   +A        K+ P  P+    +A+ Y  +        ++KR          
Sbjct: 418 HKDSGSIPEAIANYRTALKLKPDFPDAFCNLAHCYQIICDWADYELRMKRLVSIVQDQLE 477

Query: 315 -LRLEEINKES 324
             RL  ++   
Sbjct: 478 KGRLPSVHPHH 488


>gi|167627915|ref|YP_001678415.1| type IV pili, pilus assembly protein [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167597916|gb|ABZ87914.1| type IV pili, pilus assembly protein [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 297

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L++ Q    E    +A                     Y++S   G  + A++Y  KAL
Sbjct: 87  TKLIKAQELANEHNQKLAIVDY-----------AG--GYYYQSI--GANSIAEKYYQKAL 131

Query: 182 DISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +  P          Q      +++SRA     +        +  + + L ++ +    K 
Sbjct: 132 ENHPKNYEAMNFYAQFLCTEKEDYSRAQELFEKALFMPNNNDMAQTLFLYSQCMYKQGKK 191

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           D   +Y     + K   +   A +  A+    + + ++   ++
Sbjct: 192 DDALAYMQ--RADKFRIDYKAAKLRLAQMYFERGEYKECYKVI 232


>gi|104780135|ref|YP_606633.1| response regulator/TPR domain-containing protein [Pseudomonas
           entomophila L48]
 gi|95109122|emb|CAK13819.1| putative response regulator/TPR domain protein [Pseudomonas
           entomophila L48]
          Length = 535

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 21/181 (11%)

Query: 120 YLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            L  LL    Q A A+  Y  A +   +M  +          +       G+   AQ   
Sbjct: 203 ALGNLLHKRGQHAQAQGVYEQALKAFPIMPNLYD-------GMAEVLVAQGETRRAQHML 255

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--LLIARSLE 235
            +A+ +SP A     A+ +  +   ++  A           +      A   L + ++L 
Sbjct: 256 EEAVRLSPLAVRRQAALGKLALDNADFESASKAFRHAVNQGQSSRYKDAESNLGLVQALM 315

Query: 236 NADKGDMIASY----------HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           N + G+ + +             A E+++     + A +  A SL        A  + E+
Sbjct: 316 NKNAGNGLDARTRVEINTVLSEVAKENVEDQGLQVRARLMKAASLQQAGDAETAAKLTEQ 375

Query: 286 I 286
            
Sbjct: 376 A 376


>gi|332642377|gb|AEE75898.1| protein high chlorophyll fluorescent 107 [Arabidopsis thaliana]
          Length = 618

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 18/267 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            NI  AR + +   +     NEY+     LLE +      +Y  A    +      +   
Sbjct: 251 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKA----GRYEQARYLFKQATICNSRSC 305

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +  +      +     +A++   KA+  SP   +                R    L   
Sbjct: 306 ASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL--- 362

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K     N    +LL +  L          +      + +L        I        + 
Sbjct: 363 -KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWKEG 421

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328
               A  + ++   ++ + E A+         E   G L  A RL      IN +S  + 
Sbjct: 422 NTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTW 481

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +  +++  + G  ++A     L  +  
Sbjct: 482 MTWAQLEEDQGDTERAEEIRNLYFQQR 508


>gi|320107097|ref|YP_004182687.1| TPR domain-containing protein [Terriglobus saanensis SP1PR4]
 gi|319925618|gb|ADV82693.1| TPR domain protein [Terriglobus saanensis SP1PR4]
          Length = 435

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 7/198 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
             L  + A     A +    +              L  QIA +      A      +L  
Sbjct: 144 RALARLDAGTNNNAAR-DELLQALKLSPETPDDRELAAQIASSSGDSADAETVYRRVLTE 202

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
              +  A   L     R      A+    KAL+  P    ++  +   Y   K+   A+ 
Sbjct: 203 SPGQIEASIGLARLQARAARFTDAEATLNKALETHPGDVTLSTQLASIYGAEKKPEAALA 262

Query: 210 FLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
            L      + ++ N +R +     +      G    S       LK   + +        
Sbjct: 263 LLETAHTAHPEDPNVSRML-----ARLYVQTGAPDKSISIYETLLKAAPSDVELLDDYGD 317

Query: 269 SLISQNKKRKAEVILEKI 286
            L+   +  +AE +L+K 
Sbjct: 318 GLMRNKQFAQAEDVLKKA 335



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 88/292 (30%), Gaps = 35/292 (11%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
            +M      +     E     ++  +  L + +   A + L+ +L+       A Y L F
Sbjct: 16  AQMQLPAGTRSALDVEEQQKQIQNAEELLQKNEAAKARDLLQAVLKGDPKNARASYDLGF 75

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
               + +  +A+     A+           A+        + + A   L    +     +
Sbjct: 76  ADESLKEEAAAETAYRSAIAADKSQFEARLALGLLLARQGKMAEAREQLLAATERTPVSD 135

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            +   +            +  A+  + +++LKL   +      AA+   S      AE +
Sbjct: 136 PSNKGMAFRALARLDAGTNNNAARDELLQALKLSPETPDDRELAAQIASSSGDSADAETV 195

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                           Y  +L+E+                  +E+ + ++++        
Sbjct: 196 ----------------YRRVLTES---------------PGQIEASIGLARLQARAARFT 224

Query: 343 QAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDP 392
            A A    A++  P    +   LA I  A        L   ++A  A   DP
Sbjct: 225 DAEATLNKALETHPGDVTLSTQLASIYGAEKKPEA-ALALLETAHTAHPEDP 275


>gi|195054947|ref|XP_001994384.1| GH16619 [Drosophila grimshawi]
 gi|193892147|gb|EDV91013.1| GH16619 [Drosophila grimshawi]
          Length = 701

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 48/171 (28%), Gaps = 13/171 (7%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++    A EW                   N A +    +    D G+   ++    +++
Sbjct: 414 MLRTRQRAAEWLNEEKLFTSALLVCP----NNAKVHYNIARLATDTGNSSRAFQHYHKAI 469

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L      A +            R AE  +    K   +PE    + +L       K K 
Sbjct: 470 ELYPGYESALMNLGNLYREHGNLRTAEKYIRAALKA--YPEFPVAWMNLGIVQASQK-KY 526

Query: 314 ALRLEEI------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              L           +       +  + LE      A      A+ + PR+
Sbjct: 527 DEALASYWKALKFRPDYAVCHYNMGNLFLEQQHYADALHHWQHAVAVNPRQ 577



 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 4/131 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++A      + A +     +++    E A+ +L       G+L +A++Y   AL   P+
Sbjct: 449 ARLATDTGNSSRAFQHYHKAIELYPGYESALMNLGNLYREHGNLRTAEKYIRAALKAYPE 508

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P     +       K++  A+    +  K   ++    A+          ++     + 
Sbjct: 509 FPVAWMNLGIVQASQKKYDEALASYWKALKFRPDY----AVCHYNMGNLFLEQQHYADAL 564

Query: 247 HDAIESLKLCD 257
           H    ++ +  
Sbjct: 565 HHWQHAVAVNP 575


>gi|15801897|ref|NP_287917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 EDL933]
 gi|15831107|ref|NP_309880.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|16129241|ref|NP_415796.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26247613|ref|NP_753653.1| tetratricopeptide repeat protein [Escherichia coli CFT073]
 gi|74312348|ref|YP_310767.1| tetratricopeptide repeat-containing protein [Shigella sonnei Ss046]
 gi|89108126|ref|AP_001906.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|91210574|ref|YP_540560.1| tetratricopeptide repeat protein [Escherichia coli UTI89]
 gi|110641515|ref|YP_669245.1| tetratricopeptide repeat protein [Escherichia coli 536]
 gi|157157418|ref|YP_001462579.1| tetratricopeptide repeat protein [Escherichia coli E24377A]
 gi|157160787|ref|YP_001458105.1| tetratricopeptide repeat protein [Escherichia coli HS]
 gi|168749091|ref|ZP_02774113.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168755950|ref|ZP_02780957.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762718|ref|ZP_02787725.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769351|ref|ZP_02794358.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168775094|ref|ZP_02800101.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168784027|ref|ZP_02809034.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168788404|ref|ZP_02813411.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168799579|ref|ZP_02824586.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC508]
 gi|170020354|ref|YP_001725308.1| tetratricopeptide repeat protein [Escherichia coli ATCC 8739]
 gi|170080959|ref|YP_001730279.1| hypothetical protein ECDH10B_1397 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683676|ref|YP_001743903.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5]
 gi|187730544|ref|YP_001880112.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94]
 gi|188496187|ref|ZP_03003457.1| tetratricopeptide repeat protein [Escherichia coli 53638]
 gi|191171105|ref|ZP_03032656.1| tetratricopeptide repeat protein [Escherichia coli F11]
 gi|194433842|ref|ZP_03066116.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012]
 gi|194436935|ref|ZP_03069034.1| tetratricopeptide repeat protein [Escherichia coli 101-1]
 gi|195939724|ref|ZP_03085106.1| hypothetical protein EscherichcoliO157_25535 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208811084|ref|ZP_03252917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816308|ref|ZP_03257487.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821968|ref|ZP_03262288.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396639|ref|YP_002270336.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209918521|ref|YP_002292605.1| tetratricopeptide repeat protein [Escherichia coli SE11]
 gi|215486577|ref|YP_002329008.1| tetratricopeptide repeat protein [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217329141|ref|ZP_03445221.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218553836|ref|YP_002386749.1| hypothetical protein ECIAI1_1303 [Escherichia coli IAI1]
 gi|218689272|ref|YP_002397484.1| tetratricopeptide repeat protein [Escherichia coli ED1a]
 gi|218694855|ref|YP_002402522.1| tetratricopeptide repeat protein [Escherichia coli 55989]
 gi|227886286|ref|ZP_04004091.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia
           coli 83972]
 gi|237705307|ref|ZP_04535788.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238900515|ref|YP_002926311.1| hypothetical protein BWG_1111 [Escherichia coli BW2952]
 gi|253773720|ref|YP_003036551.1| tetratricopeptide repeat protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161360|ref|YP_003044468.1| tetratricopeptide repeat protein [Escherichia coli B str. REL606]
 gi|254792870|ref|YP_003077707.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018471|ref|ZP_05432336.1| tetratricopeptide repeat protein [Shigella sp. D9]
 gi|256023009|ref|ZP_05436874.1| tetratricopeptide repeat protein [Escherichia sp. 4_1_40B]
 gi|260854978|ref|YP_003228869.1| hypothetical protein ECO26_1846 [Escherichia coli O26:H11 str.
           11368]
 gi|260867729|ref|YP_003234131.1| hypothetical protein ECO111_1661 [Escherichia coli O111:H- str.
           11128]
 gi|261224265|ref|ZP_05938546.1| hypothetical protein EscherichiacoliO157_06625 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257479|ref|ZP_05950012.1| hypothetical protein EscherichiacoliO157EcO_16902 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291282369|ref|YP_003499187.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293433641|ref|ZP_06662069.1| yciM protein [Escherichia coli B088]
 gi|300819007|ref|ZP_07099211.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|300904929|ref|ZP_07122747.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|300919464|ref|ZP_07135965.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
 gi|300926666|ref|ZP_07142442.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|300927789|ref|ZP_07143353.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|300948358|ref|ZP_07162464.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|300954528|ref|ZP_07166975.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|300971709|ref|ZP_07171582.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|300971809|ref|ZP_07171643.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
 gi|301017636|ref|ZP_07182310.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
 gi|301022781|ref|ZP_07186623.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
 gi|301046124|ref|ZP_07193299.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|301304377|ref|ZP_07210490.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|301326991|ref|ZP_07220280.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
 gi|301647223|ref|ZP_07247042.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|306813694|ref|ZP_07447875.1| tetratricopeptide repeat protein [Escherichia coli NC101]
 gi|307137921|ref|ZP_07497277.1| tetratricopeptide repeat protein [Escherichia coli H736]
 gi|307309965|ref|ZP_07589615.1| tetratricopeptide repeat protein [Escherichia coli W]
 gi|309793245|ref|ZP_07687672.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|312971472|ref|ZP_07785647.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|331641843|ref|ZP_08342978.1| putative heat shock protein [Escherichia coli H736]
 gi|331652323|ref|ZP_08353342.1| putative heat shock protein [Escherichia coli M718]
 gi|331657330|ref|ZP_08358292.1| putative heat shock protein [Escherichia coli TA206]
 gi|331672808|ref|ZP_08373594.1| putative heat shock protein [Escherichia coli TA280]
 gi|331677061|ref|ZP_08377757.1| putative heat shock protein [Escherichia coli H591]
 gi|332279526|ref|ZP_08391939.1| tetratricopeptide repeat protein [Shigella sp. D9]
 gi|77416653|sp|P0AB60|YCIM_ECO57 RecName: Full=Uncharacterized protein yciM; Flags: Precursor
 gi|77416654|sp|P0AB59|YCIM_ECOL6 RecName: Full=Uncharacterized protein yciM; Flags: Precursor
 gi|77416655|sp|P0AB58|YCIM_ECOLI RecName: Full=Uncharacterized protein yciM; Flags: Precursor
 gi|12515512|gb|AAG56533.1|AE005379_1 putative heat shock protein [Escherichia coli O157:H7 str. EDL933]
 gi|26108015|gb|AAN80215.1|AE016760_74 Hypothetical protein yciM precursor [Escherichia coli CFT073]
 gi|1742094|dbj|BAA14834.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|2367116|gb|AAC74362.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13361318|dbj|BAB35276.1| putative heat shock protein [Escherichia coli O157:H7 str. Sakai]
 gi|73855825|gb|AAZ88532.1| putative heat shock protein [Shigella sonnei Ss046]
 gi|91072148|gb|ABE07029.1| putative heat shock protein [Escherichia coli UTI89]
 gi|110343107|gb|ABG69344.1| hypothetical protein YciM precursor [Escherichia coli 536]
 gi|157066467|gb|ABV05722.1| tetratricopeptide repeat protein [Escherichia coli HS]
 gi|157079448|gb|ABV19156.1| tetratricopeptide repeat protein [Escherichia coli E24377A]
 gi|169755282|gb|ACA77981.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli ATCC 8739]
 gi|169888794|gb|ACB02501.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|170521394|gb|ACB19572.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5]
 gi|187427536|gb|ACD06810.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94]
 gi|187769262|gb|EDU33106.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016626|gb|EDU54748.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|188491386|gb|EDU66489.1| tetratricopeptide repeat protein [Escherichia coli 53638]
 gi|188998726|gb|EDU67712.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189356792|gb|EDU75211.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361584|gb|EDU80003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367076|gb|EDU85492.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189371824|gb|EDU90240.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189377972|gb|EDU96388.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC508]
 gi|190908837|gb|EDV68425.1| tetratricopeptide repeat protein [Escherichia coli F11]
 gi|194417945|gb|EDX34040.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012]
 gi|194423918|gb|EDX39906.1| tetratricopeptide repeat protein [Escherichia coli 101-1]
 gi|208724590|gb|EDZ74298.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732956|gb|EDZ81644.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208742091|gb|EDZ89773.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158039|gb|ACI35472.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209771898|gb|ACI84261.1| putative heat shock protein [Escherichia coli]
 gi|209771900|gb|ACI84262.1| putative heat shock protein [Escherichia coli]
 gi|209771902|gb|ACI84263.1| putative heat shock protein [Escherichia coli]
 gi|209771904|gb|ACI84264.1| putative heat shock protein [Escherichia coli]
 gi|209771906|gb|ACI84265.1| putative heat shock protein [Escherichia coli]
 gi|209911780|dbj|BAG76854.1| putative heat shock protein [Escherichia coli SE11]
 gi|215264649|emb|CAS09020.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|217317580|gb|EEC26008.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218351587|emb|CAU97299.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218360604|emb|CAQ98162.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|218426836|emb|CAR07688.2| conserved hypothetical protein [Escherichia coli ED1a]
 gi|222033086|emb|CAP75826.1| Uncharacterized protein yciM [Escherichia coli LF82]
 gi|226900064|gb|EEH86323.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227836490|gb|EEJ46956.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia
           coli 83972]
 gi|238860472|gb|ACR62470.1| conserved protein [Escherichia coli BW2952]
 gi|253324764|gb|ACT29366.1| Tetratricopeptide domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973261|gb|ACT38932.1| hypothetical protein ECB_01257 [Escherichia coli B str. REL606]
 gi|253977475|gb|ACT43145.1| hypothetical protein ECD_01257 [Escherichia coli BL21(DE3)]
 gi|254592270|gb|ACT71631.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|257753627|dbj|BAI25129.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257764085|dbj|BAI35580.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260449588|gb|ACX40010.1| Tetratricopeptide domain protein [Escherichia coli DH1]
 gi|290762242|gb|ADD56203.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324460|gb|EFE63882.1| yciM protein [Escherichia coli B088]
 gi|294493956|gb|ADE92712.1| tetratricopeptide repeat protein [Escherichia coli IHE3034]
 gi|299881082|gb|EFI89293.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
 gi|300301857|gb|EFJ58242.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|300309315|gb|EFJ63835.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
 gi|300318503|gb|EFJ68287.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|300400130|gb|EFJ83668.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
 gi|300403078|gb|EFJ86616.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|300411195|gb|EFJ94733.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|300413486|gb|EFJ96796.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
 gi|300417332|gb|EFK00643.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|300452119|gb|EFK15739.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|300464182|gb|EFK27675.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|300528468|gb|EFK49530.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|300840364|gb|EFK68124.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|300846374|gb|EFK74134.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
 gi|301074585|gb|EFK89391.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|305852968|gb|EFM53413.1| tetratricopeptide repeat protein [Escherichia coli NC101]
 gi|306909683|gb|EFN40177.1| tetratricopeptide repeat protein [Escherichia coli W]
 gi|307553341|gb|ADN46116.1| tetratricopeptide repeat protein [Escherichia coli ABU 83972]
 gi|307627143|gb|ADN71447.1| tetratricopeptide repeat protein [Escherichia coli UM146]
 gi|308122832|gb|EFO60094.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|309701580|emb|CBJ00887.1| tetratricopeptide repeat protein [Escherichia coli ETEC H10407]
 gi|310336069|gb|EFQ01269.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|312945917|gb|ADR26744.1| tetratricopeptide repeat protein [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313848615|emb|CAQ31785.2| conserved protein [Escherichia coli BL21(DE3)]
 gi|315060533|gb|ADT74860.1| Predicted N-acetylglucosaminyl transferase [Escherichia coli W]
 gi|315135918|dbj|BAJ43077.1| hypothetical protein ECDH1ME8569_1221 [Escherichia coli DH1]
 gi|315254320|gb|EFU34288.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1]
 gi|315289121|gb|EFU48519.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3]
 gi|315295312|gb|EFU54642.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1]
 gi|315297196|gb|EFU56476.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3]
 gi|315619361|gb|EFU99905.1| tetratricopeptide repeat family protein [Escherichia coli 3431]
 gi|320177284|gb|EFW52289.1| tetratricopeptide repeat protein [Shigella dysenteriae CDC 74-1112]
 gi|320189967|gb|EFW64619.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195705|gb|EFW70330.1| tetratricopeptide repeat protein [Escherichia coli WV_060327]
 gi|320199316|gb|EFW73907.1| tetratricopeptide repeat protein [Escherichia coli EC4100B]
 gi|320637177|gb|EFX07003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           G5101]
 gi|320642543|gb|EFX11791.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str.
           493-89]
 gi|320647896|gb|EFX16604.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str. H
           2687]
 gi|320653498|gb|EFX21603.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659198|gb|EFX26787.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320663991|gb|EFX31178.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153286|gb|EFZ39544.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14]
 gi|323172362|gb|EFZ57999.1| tetratricopeptide repeat family protein [Escherichia coli LT-68]
 gi|323179766|gb|EFZ65327.1| tetratricopeptide repeat family protein [Escherichia coli 1180]
 gi|323187513|gb|EFZ72822.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1]
 gi|323378905|gb|ADX51173.1| tetratricopeptide repeat protein [Escherichia coli KO11]
 gi|323942397|gb|EGB38567.1| TPR repeat-containing protein [Escherichia coli E482]
 gi|323947437|gb|EGB43441.1| TPR repeat-containing protein [Escherichia coli H120]
 gi|323953847|gb|EGB49648.1| TPR repeat-containing protein [Escherichia coli H263]
 gi|323962582|gb|EGB58162.1| TPR repeat-containing protein [Escherichia coli H489]
 gi|323973478|gb|EGB68664.1| TPR repeat-containing protein [Escherichia coli TA007]
 gi|324006106|gb|EGB75325.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2]
 gi|324011303|gb|EGB80522.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1]
 gi|324018891|gb|EGB88110.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3]
 gi|324117526|gb|EGC11432.1| TPR repeat-containing protein [Escherichia coli E1167]
 gi|326341058|gb|EGD64851.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           1125]
 gi|326343298|gb|EGD67065.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           1044]
 gi|331038641|gb|EGI10861.1| putative heat shock protein [Escherichia coli H736]
 gi|331050601|gb|EGI22659.1| putative heat shock protein [Escherichia coli M718]
 gi|331055578|gb|EGI27587.1| putative heat shock protein [Escherichia coli TA206]
 gi|331070029|gb|EGI41398.1| putative heat shock protein [Escherichia coli TA280]
 gi|331075750|gb|EGI47048.1| putative heat shock protein [Escherichia coli H591]
 gi|332091675|gb|EGI96755.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82]
 gi|332098116|gb|EGJ03089.1| tetratricopeptide repeat family protein [Shigella dysenteriae
           155-74]
 gi|332101878|gb|EGJ05224.1| tetratricopeptide repeat protein [Shigella sp. D9]
 gi|332342874|gb|AEE56208.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|298529505|ref|ZP_07016908.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510941|gb|EFI34844.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 241

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 7/174 (4%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            D + A R   KAL++ PD       + Q          A        +  +      A 
Sbjct: 70  EDWDRAARDFEKALELKPDYGEAWNNLGQVRKAQGRTQEARQAYEAALEIEEYMTPEFAY 129

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                +    ++GD+  +   A+ S++     +     A       +   +A  I E+  
Sbjct: 130 --YNLASLFQEEGDLERALEYAVNSVEKNRRFVPGYDLAGSLYQELDLYDEALRIFERGA 187

Query: 288 KVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +  P +  ++  Y    + +      +     + E N +S E+ +  ++  LE 
Sbjct: 188 QAMPGNARLSLAYAEELVRAGRDSEAITWFEHVIEQNDDSQEAQM--ARDYLEA 239


>gi|294142615|ref|YP_003558593.1| hemY protein [Shewanella violacea DSS12]
 gi|293329084|dbj|BAJ03815.1| hemY protein, putative [Shewanella violacea DSS12]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 135/402 (33%), Gaps = 29/402 (7%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++ Y  +I L +C           +  T  +    T     +  L  F     L+  
Sbjct: 1   MTRVLIYLGIILLGLCISPFFEGMNGYLYFTIWDYEVETGVIFAIIALIVFYALLQLVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119
           V  F ++      ++ +K       K    G +++A  +   A K M     +       
Sbjct: 61  VIIFSINLLLNSRYLPNKWRKKAARKHTLMGALALAEEDWSTAEKAMIKGAEKGELPTLN 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-----YSLYFESCRIGDLNSAQ 174
            L      Q     +    + +K  +  +       AV       L+ +    G+L+ A+
Sbjct: 121 LLAAARAAQ----HQNNTESRDKYLLQAEQEPLALKAVSTSRTRYLFQQ----GELDKAR 172

Query: 175 RYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAI 227
               K   +SP      P V    ++ Y    +W+ A+  L    +K++   E +     
Sbjct: 173 IELDK---LSPTSNSKLP-VLRLAIELYKAQADWN-ALKLLLPIIKKRQVLNEEDSKSLT 227

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVILEK 285
           +L   SL    +             L   +        A+ SL     N++ +A+ +L K
Sbjct: 228 MLTNNSLLIQAQSSSEQELEKVWHWLSRAERKEP-VYIASYSLGLHKFNREAEAKKLLMK 286

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             K +      +    +LS   V + K+   LE+   E +    +++ + L+     QA 
Sbjct: 287 QIKSDLCSNTTSALVKVLSPADVEERKQIFLLEKKYGEKLSFQKLLANLHLQNSDYRQAI 346

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           A         P K  +L L +  +        I  + Q+A+ 
Sbjct: 347 AYWKKVCNQEPNKANWLALGETHEHLGEQNGAIQSYRQAAVS 388


>gi|262305045|gb|ACY45115.1| acetylglucosaminyl-transferase [Streptocephalus seali]
          Length = 289

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 8/166 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GMVQEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +        + + A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDINGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               +    A      +  + D G++  +      +LKL  +   A
Sbjct: 151 INPGF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDA 192



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A    N   +       + A  L   +    
Sbjct: 10  KRAIELQPNFPDAYCNLANALKEKGMVQEAEDCYNTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMGDINGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|255034468|ref|YP_003085089.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254947224|gb|ACT91924.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
           18053]
          Length = 330

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 11/165 (6%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           + +NE ++  L  QI         A  K    +        A  +L F   + GD   A 
Sbjct: 11  SLNNEGVILFLNGQI-------EEAIAKYRQAIAAEPDNASAHNNLGFALAQQGDFEQAS 63

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            +   +L++ P+       +    +++ ++S A               R+ A +  + + 
Sbjct: 64  EHYRLSLELDPENDNTWLNLGNLKMMSGDYSGARDLFENAL----NITRDIANVWESYAK 119

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 D  A+ +   ++L++  +S    +    +LI+  K  +A
Sbjct: 120 LMTISDDPSAAVNAWQQALRIHPHSPDYHLELGIALIADGKHSQA 164


>gi|225680653|gb|EEH18937.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb03]
          Length = 941

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 29/161 (18%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   +A + +P+   +  A V+    AK+   A   L+  ++ A 
Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADAKQTEHARELLSTARREAG 675

Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250
                   +   R L N                              ++     +     
Sbjct: 676 TDRVWIKSVAFERQLGNTDRALDLVNQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              + C  S+   + A++         KA  IL++     P
Sbjct: 736 TGTRACPKSVPIWLLASRLEEKAGVVVKARSILDRARLAVP 776


>gi|218777993|ref|YP_002429311.1| hypothetical protein Dalk_0133 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759377|gb|ACL01843.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 616

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 71/211 (33%), Gaps = 34/211 (16%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           ++A  Y  KA+   P++ ++ + +++  V    +  A+       K   +  R    +L+
Sbjct: 104 DAASLYLDKAIAKDPESRFLKQGLLEILVEKGNYQGALEESALLLKEDPDNVR----VLL 159

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            R+           +     + LK            A++    N+  KA  + ++     
Sbjct: 160 TRAAVLLQLKKWNEASAVYEKVLKTAPEESQTYFLLAETYHKANQPEKAISVYQR----- 214

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                   +   L  +                + + +   + ++A  MG    A      
Sbjct: 215 --------FIENLPNS---------------PDVISAWFFIGRVAYNMGDYALAAQAFEE 251

Query: 351 AMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
            + + P  +++ L LA++ +    N +K+  
Sbjct: 252 TLLLKPDFEQVQLNLAEVYR-ELGNDEKVQA 281


>gi|195377617|ref|XP_002047585.1| GJ11852 [Drosophila virilis]
 gi|194154743|gb|EDW69927.1| GJ11852 [Drosophila virilis]
          Length = 931

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 686

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          +      +LK C  SI   I +A     +
Sbjct: 687 LLAEAVEVFPEFPKLWMMKGQIEEQQKRTDDAAATYTLALKKCPTSIPLWILSANLEERK 746

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               KA  ILE+    N  P++A ++   +       LK
Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|253701092|ref|YP_003022281.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M21]
 gi|251775942|gb|ACT18523.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M21]
          Length = 882

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 71/247 (28%), Gaps = 9/247 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +A    + A E+   ++            L      + ++ +A     KA+     + 
Sbjct: 639 AYVAMNDSSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSV 698

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A+   Y   KE+ +A+       +   +    +  +          K    A    
Sbjct: 699 EARIALGNLYQATKEYDKALASYQYAHRMNPDSVAAQFAIGALYDSTGKKKQAADAYRAV 758

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSE 305
             ++ +        +   A        K +A  +    +K  P +P + +   Y    + 
Sbjct: 759 LQKNDRYVPALNNLAYLCADGY---GSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNG 815

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM---KIAPRKEIFL 362
            +   +K   R   +          +       G   ++      ++   +    K    
Sbjct: 816 RSADAVKVMERAVALLPNDPTVRYHLGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQT 875

Query: 363 LLAQIEQ 369
           LLA++++
Sbjct: 876 LLAELKR 882



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 99/289 (34%), Gaps = 36/289 (12%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           A     LA  + +    Q+         LL      ++++   A   L+  L+       
Sbjct: 413 AEGETELATAVQAAPDAQN-------SRLLLASYYQSQKKPAKALSTLKSGLKGGKGDVP 465

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-- 213
              ++       G+     +   +A  + P      + +   +    ++ RA+  LNQ  
Sbjct: 466 LYNAIASLQLSAGNKAEGIKTLEQAKRLDPGFAATYQNLAGVHAATGDYPRAMAELNQLL 525

Query: 214 --------------------KKKNAKEWNRNRAI------LLIARSLENADKGDMIASYH 247
                                K+        +A         +A +  +  KGD   +  
Sbjct: 526 TRDAGNLRALLGLAALSEISGKETDAVAYYQKATQTKAPEAFLALAGYHQKKGDAAKAIA 585

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSEN 306
              E +KL   +I A     + L SQ + +KA  + +++  +N    +A  I  ++   +
Sbjct: 586 VLDEEIKLDPRAISALEAKGRILASQKEYQKALKVFDQVEALNEERGVALKIGAYVAMND 645

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +   +++A RL      S +  ++++ +   + +I  A  +   A++  
Sbjct: 646 SSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRAD 694



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 12/183 (6%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-----LAERQYNIAHEKLEMMLQI 149
           IA  N+  A K +      + + +      +  Q A      +  +   A +    +LQ 
Sbjct: 702 IALGNLYQATKEYDKALASYQYAHRMNPDSVAAQFAIGALYDSTGKKKQAADAYRAVLQK 761

Query: 150 PATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                 A+ +L Y  +   G    A R A  A    P  P V + V          + A+
Sbjct: 762 NDRYVPALNNLAYLCADGYGSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNGRSADAV 821

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL--CDNSIMASICA 266
             + +           R  L +A  L     GD   S     +SL L    ++  A    
Sbjct: 822 KVMERAVALLPNDPTVRYHLGLAYYL----AGDRARSEQALQKSLSLGQSPDTKAAQTLL 877

Query: 267 AKS 269
           A+ 
Sbjct: 878 AEL 880


>gi|157812780|gb|ABV81135.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Prodoxus
           quinquepunctellus]
          Length = 287

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVSEAEECYNTALRLCPSHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ + A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPSFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 74/185 (40%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++   P  A+
Sbjct: 66  EQGFIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ--PSFAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|21229659|ref|NP_635576.1| hypothetical protein XCC0181 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66766535|ref|YP_241297.1| hypothetical protein XC_0190 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188989596|ref|YP_001901606.1| hypothetical protein xccb100_0200 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21111140|gb|AAM39500.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66571867|gb|AAY47277.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731356|emb|CAP49531.1| hypothetical protein xcc-b100_0200 [Xanthomonas campestris pv.
           campestris]
          Length = 690

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A + +  +PD       +        +   A+  +        E 
Sbjct: 6   LQALRRNAADDAVALAREWVTSAPDLSAAHRWLGLSLQQQGQPVLALASIEAAL----EL 61

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+  +      S  L  N   A +  A   +++    +AE 
Sbjct: 62  TPEDADLHLLRAGLLLAVRDVPGADAALSRSTTLDPNQFNAYVMQAHLAVARGDLDEAER 121

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +    +   L    R  E   +    +  +    L+ 
Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGQSDRALSLLTRAAEQLPDDARVMFALGFAYLQK 181

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 182 EHFAFAERAFERVVELNP 199



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 61/191 (31%), Gaps = 24/191 (12%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +   GDL+ A+R +  A  ++P+ P     + VV+      +  RA++ L +  +   + 
Sbjct: 110 AVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMRRGQSD--RALSLLTRAAEQLPD- 166

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A ++ A       K     +       ++L           A+    Q +   A  
Sbjct: 167 ---DARVMFALGFAYLQKEHFAFAERAFERVVELNPPGTALRAFIAQLAQRQGRLDDALS 223

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            ++ +    P  +I            + +L   + L+    +       V+ + L +   
Sbjct: 224 AMQGV-LAQPGGDI----------PAMRRLAGEMELQAGRPDQ-----AVAHLRLALAHW 267

Query: 342 DQAHAKAMLAM 352
                     +
Sbjct: 268 PADRRTLHALL 278


>gi|169769488|ref|XP_001819214.1| pre-mRNA-splicing factor prp1 [Aspergillus oryzae RIB40]
 gi|83767072|dbj|BAE57212.1| unnamed protein product [Aspergillus oryzae]
          Length = 938

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 120/335 (35%), Gaps = 47/335 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SIA      AR +++Y      F N   ++L     A  ER +       +++ +     
Sbjct: 549 SIARGKYETARAIYAYA--LRVFVNRRSIWL---AAADLERNHGTKEALWQVLEKAVEAC 603

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P + E  +  L  E  + G+++ A+R   +A + +P+   +  A V+    A++  +A  
Sbjct: 604 PQSEELWLL-LAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADARQTDQARE 662

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240
            L   ++ A         +   R L NA++                              
Sbjct: 663 LLATARREAGTDRVWVKSVAFERQLGNANEALDLVNQGLQLYPKADKLWMMKGQIYESQN 722

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +        + C  S+   + A++         KA  +L++       P+ A ++T
Sbjct: 723 KYPQAREVYGTGTRACSRSVPLWLLASRLEEKAGAVVKARSVLDRARLAV--PKSAELWT 780

Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356
             +  E     + +A  L     +E   S ++ S+    LE  +  +A +      K+  
Sbjct: 781 ESVRVERRANNIAQAKILMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDN 839

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +F+ +A+I        +K + W + A+ +  D
Sbjct: 840 DPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 873


>gi|87310659|ref|ZP_01092787.1| hypothetical protein DSM3645_26724 [Blastopirellula marina DSM
           3645]
 gi|87286640|gb|EAQ78546.1| hypothetical protein DSM3645_26724 [Blastopirellula marina DSM
           3645]
          Length = 885

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 11/146 (7%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P          +  +   +++ A        K   +  R     ++     + +  D  
Sbjct: 192 APRYAGAYITAAELALAKNDFALAAEDFQNALKIDPDNPR-----ILYGLARSFEPSDSK 246

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP---EIANIY 299
            +     E+L +  + + + + AA+  +   +  + E +LE++ K+NP  P    I  + 
Sbjct: 247 KAEQYLNEALAINPHHVPSLLLAAEEHLQAERYEETEKLLEQVLKINPVQPKAWAIRAVL 306

Query: 300 THLLSENTVGKLKRALRLEEI--NKE 323
            HL S++      RA  L+    N +
Sbjct: 307 AHLSSDSEQETQARAKALQHWTDNPD 332



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 93/252 (36%), Gaps = 25/252 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQR-YATKA 180
            LL+++  L   +Y  A + LE   +   T    +  +  +  R  G+   A+   A  A
Sbjct: 89  RLLKLESELILGRYADAVQTLEE-AKKVNTYSIRLRWIERDVRRFQGESAKAKEVLAEIA 147

Query: 181 LDI-----SPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            ++        +P     + +  ++      +  +  T L ++ +         A   I 
Sbjct: 148 AEVERSSGRYRSPEDMVVIGQFFLEI---GADPKQIRTTLFKQVQQRAP---RYAGAYIT 201

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +     K D   +  D   +LK+  ++       A+S    +  +KAE  L +   +NP
Sbjct: 202 AAELALAKNDFALAAEDFQNALKIDPDNPRILYGLARS-FEPSDSKKAEQYLNEALAINP 260

Query: 292 H--PEIA-NIYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAH 345
           H  P +      HL +E      K   ++ +IN    ++     +++ ++ +     QA 
Sbjct: 261 HHVPSLLLAAEEHLQAERYEETEKLLEQVLKINPVQPKAWAIRAVLAHLSSDSEQETQAR 320

Query: 346 AKAMLAMKIAPR 357
           AKA+      P 
Sbjct: 321 AKALQHWTDNPD 332



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 62/193 (32%), Gaps = 30/193 (15%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           ++  ++   ++ A+  L + KK      R R I           +G+   +     E   
Sbjct: 93  LESELILGRYADAVQTLEEAKKVNTYSIRLRWI----ERDVRRFQGESAKAKEVLAE--- 145

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
                      AA+   S  + R  E ++           I   +  + ++    +    
Sbjct: 146 ----------IAAEVERSSGRYRSPEDMVV----------IGQFFLEIGADPKQIRTTLF 185

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSH 373
            ++++       + +  +++AL       A      A+KI P    I   LA+       
Sbjct: 186 KQVQQRAPRYAGAYITAAELALAKNDFALAAEDFQNALKIDPDNPRILYGLAR--SFEPS 243

Query: 374 NTDKILYWTQSAL 386
           ++ K   +   AL
Sbjct: 244 DSKKAEQYLNEAL 256


>gi|291571512|dbj|BAI93784.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 491

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 71/241 (29%), Gaps = 23/241 (9%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A A  +Y  A +     L+I     +A  +L       G L  A     +AL + P+  
Sbjct: 37  AARAAGRYREAEQIWREFLEIEPNNAYAHNNLGVALYHQGKLPEAIEAYRRALALDPNNA 96

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W    +        +   AI    +    A + N   A   +  +L   ++G +  +   
Sbjct: 97  WAHNNLGLALADQGKLPEAIEAYRRAL--ALDSNNAYAHNNLGVAL--RNQGKLPEAIEA 152

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTH--- 301
              +L L  N+  A      +L  Q K  +A           P     P  A+   H   
Sbjct: 153 YRRALALDPNNAYAHNNLGYALYLQGKLPEAIDAYRTA-LALPDRRGTPASAHTLAHNNL 211

Query: 302 ----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                   +  G +    +   ++         ++   L+      A       +   P 
Sbjct: 212 GLALQQQGDLPGAIAEYKKAIRLDPN-----FAIAYSNLQEAERLLALR--GNPLPANPT 264

Query: 358 K 358
           +
Sbjct: 265 E 265


>gi|301168178|emb|CBW27767.1| putative exported protein [Bacteriovorax marinus SJ]
          Length = 606

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 16/140 (11%)

Query: 172 SAQRYATKA-------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
           +A +   +A       L   P +      + + Y L  ++ +A + LN+ ++++K     
Sbjct: 147 TALKEKREAQLVYLSILKNFPSSEEACVFLAKSYSLESKFKKAFSLLNKCERSSK----G 202

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +AI    R      +G++ ++  +  +SL++      A+I        + K   A  + E
Sbjct: 203 KAIYSFYRGKIEIARGNIKSAQKNFKKSLRVDPTYQQAAIGLGAIYEEEKKFANALEVYE 262

Query: 285 KIWKVNPHPEIANIYTHLLS 304
           K  K +PH      Y  L +
Sbjct: 263 KFLKKSPH-----AYAILKN 277


>gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera]
          Length = 1091

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 7/165 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +   ++  Y  A       ++    P       Y L     ++GD  S+     K L++
Sbjct: 312 ARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEV 371

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+     +A+   YV   +  +A  +L +  K   +    +A L +   L  +D G  +
Sbjct: 372 YPENCEALKALGHIYVQLGQTEKAQEYLRKATK--IDPRDAQAFLDLGELLITSDTGAAL 429

Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286
            ++  A   LK     +   +          + +   AE   ++ 
Sbjct: 430 DAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEA 474



 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 88/302 (29%), Gaps = 51/302 (16%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
           Y        +E   ++ + Q+ LA+     A    +++L        A+          G
Sbjct: 117 YNKASRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRG 176

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKNAKEWNRNRAI 227
             + +     +AL + PD P      +        ++ +A     +  +   E N    +
Sbjct: 177 RYSDSLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPE-NVEALV 235

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----------------------SIC 265
            L    L   D   +         + ++     MA                      +  
Sbjct: 236 ALGIMDLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295

Query: 266 A---------------AKSLISQNKKRKA-----EVILEKIWKVNPH----PEIANIYTH 301
           A               A+S  S+    KA       + E      PH    P        
Sbjct: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKES---NKPHDFVLPYYGLGQVQ 352

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           L   +    L    ++ E+  E+ E+L  +  I +++G  ++A      A KI PR    
Sbjct: 353 LKLGDFRSSLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQA 412

Query: 362 LL 363
            L
Sbjct: 413 FL 414


>gi|303287102|ref|XP_003062840.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455476|gb|EEH52779.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 138

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           AK W  A+    +  +        RA L   R+     +     +  ++  +L+   +  
Sbjct: 10  AKNWKEALNSYQKALEMTMAGTEERASLYSNRAACFLMENRYREAIRESDAALESKPDFK 69

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            A +  +++    N+  KA   LE   KV+P
Sbjct: 70  PALVRRSRAYEQINEYSKAVSDLESALKVDP 100


>gi|224073548|ref|XP_002195417.1| PREDICTED: similar to laminin, gamma 3 [Taeniopygia guttata]
          Length = 1546

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 25/285 (8%)

Query: 82   DKGYKALYTGL--MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ---Y 136
             +  + L  G+  +++ A     A +       +       L  +L VQ A   ++    
Sbjct: 1186 QRAQEELGAGMAEVAVGARRAVTAVEQAHADLAERLLQVAALGQVLPVQAADLAQELAVL 1245

Query: 137  NIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
              A    E + Q            L  E  R       Q  A  A D++  A    +AV+
Sbjct: 1246 EQAAAAQEPLAQRAVEASHTLAAGLQLELQRTQSFKQLQDQAGSAHDMATMAVSRGKAVL 1305

Query: 196  QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                     S A + L   +   K     ++   + R +       M+ +     ++ K 
Sbjct: 1306 ---------SDAESLLASLEGMKKVLGHQKSQAALRRRMATVRDRVMVDAQRKIKQAEKT 1356

Query: 256  CDNSIMASICAAKS-----LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
              NS+  SI A ++      IS+   ++A  +L++      H           +  T  +
Sbjct: 1357 LGNSLSISITAQRTAGEAEQISEGSAKRARAVLQESKHALKH----ASQLTTRANETQWE 1412

Query: 311  LKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            L R   +  ++  +  E+  + S+++    S+ +A    M  ++ 
Sbjct: 1413 LSRQEHMAEKLRADLEEAQQVGSEVSEMAKSLQEARGSLMSDIET 1457


>gi|86159982|ref|YP_466767.1| hypothetical protein Adeh_3564 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776493|gb|ABC83330.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 433

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 48/173 (27%), Gaps = 31/173 (17%)

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++ +  +   +     +AR  E   +GD   +      +L+L            ++   
Sbjct: 2   ARRADGGDGLDDELAFHLARGTELLAQGDADRARAALERALELGPKDAKVLALLGQACYR 61

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           Q +   A       W                            RL + N     + V + 
Sbjct: 62  QGQFDDAA----IAW---------------------------QRLVDENPVEPAARVNLG 90

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
              L+    ++A  +  +A+ + P     +    +    S +      W + A
Sbjct: 91  LAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAAAREWFRKA 143



 Score = 40.3 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 2/135 (1%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G   +A  +   AR   +          +  V  L  Q    + Q++ A    + ++
Sbjct: 19  LARGTELLAQGDADRAR--AALERALELGPKDAKVLALLGQACYRQGQFDDAAIAWQRLV 76

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                   A  +L     +      A+R    ALD++PD       +    + + + + A
Sbjct: 77  DENPVEPAARVNLGLAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAAA 136

Query: 208 ITFLNQKKKNAKEWN 222
             +  +   +     
Sbjct: 137 REWFRKAGSDHMVAR 151


>gi|114319442|ref|YP_741125.1| tetratricopeptide TPR_4 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225836|gb|ABI55635.1| Tetratricopeptide TPR_4 [Alkalilimnicola ehrlichii MLHE-1]
          Length = 584

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 88/267 (32%), Gaps = 16/267 (5%)

Query: 126 EVQIALAERQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD- 182
             Q+A+ + + + A   L+    L         +  L     R G+ + A  + ++ L+ 
Sbjct: 103 AAQLAIIQGRLDDALAALQRWDALDDDNAEVDRLLGLL--HLRAGEPDRAYHHLSRYLET 160

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +  +     + + +           +  L +      +     A   +A +      G +
Sbjct: 161 LDGEVRQAFQGLGELMGREARADDVLQVLER----LADEYAGHASAQVALARAAMQLGRL 216

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +   +  + +L  +     +   ++L++ ++   A  ++E         + +    H 
Sbjct: 217 ETALEASRRAAELDPDWQAPRMLEVQALVNLDRPEAALDVVE-ALLAQDAEDRSLRMLHA 275

Query: 303 L----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PR 357
                  +    L+    L     + +E     + +A ++   DQA        K A  R
Sbjct: 276 RLLVNMGHRERALEEFEVLMAQRPDDLEVAYAAALLATDLRRWDQAREYWQFIAKRAYQR 335

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQS 384
            E F  L +I +    N ++   W + 
Sbjct: 336 AEAFYRLGRIAEQE-GNREEARAWYER 361



 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 48/167 (28%), Gaps = 10/167 (5%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G    A      AL+  P    +  A     V   + + A   L     +  +     A
Sbjct: 416 QGRAGEAVALLDDALEAEPGDHSLLYARALARVETGDLAGAEADLRAILADEPD----DA 471

Query: 227 ILLIARSLENADKGDMIA-SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L A     AD G+ +  +      +L    +           L    K   A   LE+
Sbjct: 472 HALNALGYTLADAGERLEEARELIARALAQEPDHPAILDSKGWVLYRLGKPEAALDYLER 531

Query: 286 IWKVNPHPEIAN-----IYTHLLSENTVGKLKRALRLEEINKESVES 327
            W   P PEI       ++     E      + A  LE  +    E+
Sbjct: 532 AWARQPDPEIGAHLGEVLWVLGRREEARAIWEAAEELEADHPVLRET 578


>gi|320181725|gb|EFW56636.1| tetratricopeptide repeat protein [Shigella boydii ATCC 9905]
          Length = 389

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGECAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|319792198|ref|YP_004153838.1| hemy domain protein [Variovorax paradoxus EPS]
 gi|315594661|gb|ADU35727.1| HemY domain protein [Variovorax paradoxus EPS]
          Length = 427

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/389 (13%), Positives = 106/389 (27%), Gaps = 45/389 (11%)

Query: 23  HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82
           +    +++ W       S  ++L IL        +         S P        ++   
Sbjct: 23  NNQGTITVFWPPWRVDLSLNLVLVILLGTFVLLHVALRALAALFSLPTQARQWRLQQKER 82

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYV----SQQHTFHN--------EYLVYLLEVQIA 130
             + AL   ++ + A     ARK                           L +LL  + A
Sbjct: 83  TLHAALLDAMVQLIAGRFSRARKAAQSALVQEKTLAALDANLPQAQQVRVLSHLLAAESA 142

Query: 131 LAERQY---------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            A +            +       +L  P TRE     +   + R    +     A   L
Sbjct: 143 QALQDKPARDAHLQQALKESVDRTLLASPETRE----GVQLRAARWALEDRDAAAALARL 198

Query: 182 DISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           +  P         ++  + A         A+       K+    +     ++   + E  
Sbjct: 199 EELPQGAQRRTLALRLRLKAARQDRRTLEALETARLLAKHRAFSDAAAQSIVRGLATELL 258

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWK---VNPH 292
                 A    A   L   +  +       A + ++       A   L   W+    NP 
Sbjct: 259 SGAHDPAQLMRAWSELDTNEREMPEVAIHGAQRMVLLHGDLSLARGWLLPAWERMVANPR 318

Query: 293 P-------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                   ++A      L       L R    +  N        +     ++     +A 
Sbjct: 319 GLGDALRVKLARALEAGLDSVDADWLARIESAQRNNPRDANLQYLAGMACMKRQLWGKAQ 378

Query: 346 A---KAMLAMKIAP-RKEIFLLLAQIEQA 370
               +A LA++ A   +  +L LA++ +A
Sbjct: 379 QLLTQAGLALQDAELYRRAWLALAELAEA 407


>gi|307611344|emb|CBX01005.1| hypothetical protein LPW_27071 [Legionella pneumophila 130b]
          Length = 577

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%)

Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  Q      E     A    E  + Q P  T       L +   ++GD+ +A  Y  +A
Sbjct: 8   LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             I+P+   +   +   Y  A +   AI +  +  +   E+ +    L    +L N    
Sbjct: 66  RKINPNDVGILNNLANAYKKAGQLDEAIKYYQEAIEIKPEYVQAHNNLAATYALLN---- 121

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
           +   + H  + ++    +   A       L+   +   A+     +  +NP H E A  Y
Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHRE-AQFY 180

Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               HL         +   ++ E + E V+SL+ +  IAL+      A      A+ + 
Sbjct: 181 LGILHLEDNLLAEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239


>gi|281209859|gb|EFA84027.1| TPR repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 935

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 81/219 (36%), Gaps = 25/219 (11%)

Query: 166 RIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            IGD+  A+      +  +P     W+  A ++      + S+A   ++Q  +   +   
Sbjct: 275 EIGDIKKARLLFKSVIQTNPKHAPGWIAAAKLEMLA--GKLSQARKIISQGCQECPDNEE 332

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                     +ENA+      +     +++KL   S+   + A      +   R  + IL
Sbjct: 333 VW--------IENANLQTPDNAKAVLAQAVKLIPQSVKVWLYATNL---EKDIRMKKKIL 381

Query: 284 EKIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  +  P   ++      L   ++    L RA    E   ++VE  + ++     + + 
Sbjct: 382 RRALEFIPTSVKLWKEAIELEEPDDARIMLGRA---VECVSDNVELWLALA----NLETY 434

Query: 342 DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKIL 379
           ++A      A +  P    I++  AQ+E++   N +   
Sbjct: 435 EKAREVLNRARQSIPTSSEIWIAAAQLEESAKKNENVSR 473



 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 84/259 (32%), Gaps = 36/259 (13%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD++ A+   T+A + +P +  +  A V+      E   A   L +    A   
Sbjct: 605 KEKWLAGDVDQARSILTQAFESNPGSEEIWLAAVKIESEMNEIKVARGLLKRAIDMAATE 664

Query: 222 NRNRAILLIARSLENADKGDMIAS-------------------------------YHDAI 250
                  L+ R    +   + I +                                    
Sbjct: 665 RIWMKSALLEREFGESKAENDILAEGLKAFPTSWKLWLMKAQLEERVNPRALDKIRDIYN 724

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
            ++  C +SI   +   +     N ++KA  +LEK    NP  E   IY   +  E +VG
Sbjct: 725 SAVTKCPSSIPLWLEFVRFEKRANNQQKARTLLEKAKLRNPKNE--EIYLEFVRFEKSVG 782

Query: 310 KLKRALR-LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
             K A   L    +E  +S ++ ++         Q +       K    + +   +A+I 
Sbjct: 783 NAKAAANWLSVGLQECPKSGLLWAEAIANEPKHGQKNKCVDALNKCNNDQYVLTQVAKIF 842

Query: 369 QANSHNTDKILYWTQSALH 387
             +    DK   W + A+ 
Sbjct: 843 WFDGK-LDKAKSWFKRAIT 860



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 7/124 (5%)

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309
           +++K C +  +  +  AK         +A  IL + ++ NP   EI      + SE  + 
Sbjct: 588 QAIKNCPHYEVLWLMYAKEKWLAGDVDQARSILTQAFESNPGSEEIWLAAVKIESE--MN 645

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK---AMLAMKIAPRKEIFLLL-A 365
           ++K A  L +   +   +  I  K AL      ++ A+       +K  P      L+ A
Sbjct: 646 EIKVARGLLKRAIDMAATERIWMKSALLEREFGESKAENDILAEGLKAFPTSWKLWLMKA 705

Query: 366 QIEQ 369
           Q+E+
Sbjct: 706 QLEE 709


>gi|239905040|ref|YP_002951779.1| putative response regulator receiver protein [Desulfovibrio
           magneticus RS-1]
 gi|239794904|dbj|BAH73893.1| putative response regulator receiver protein [Desulfovibrio
           magneticus RS-1]
          Length = 455

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 69/170 (40%), Gaps = 11/170 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +L  R+      GD+  +   A ++ ++  +S+ A +      +++    +AE   +   
Sbjct: 161 VLFDRAAALLAAGDLDQAARVAAKAFEIKPDSLKAHLLLGDVALAKGDHAQAESHYKDAA 220

Query: 288 KVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +       P   +  +YT   + +   +L    RL+E++  + E   ++ +  L++G  D
Sbjct: 221 RAEKLYIEPLKRLVEVYT--QTGDDAKRLACLTRLDELSPLNFERKAVIGEAYLDLGEND 278

Query: 343 QAHA----KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           +A A       +  K+A       L+   ++    + +  L +   A+ A
Sbjct: 279 KARAFFEEARKVVGKVASDMVSDALMEMAKRIGERDQETALRFVTEAIEA 328



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 62/219 (28%), Gaps = 63/219 (28%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE------------------------ 126
           G +++A  +   A   +   ++    + E L  L+E                        
Sbjct: 200 GDVALAKGDHAQAESHYKDAARAEKLYIEPLKRLVEVYTQTGDDAKRLACLTRLDELSPL 259

Query: 127 --------VQIALAERQYNIAHEKLEM-----------MLQIPATREFAVYSLYFESCRI 167
                    +  L   + + A    E            M+            L   + RI
Sbjct: 260 NFERKAVIGEAYLDLGENDKARAFFEEARKVVGKVASDMVSDA---------LMEMAKRI 310

Query: 168 G--DLNSAQRYATKALD-----ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           G  D  +A R+ T+A++     + P   W+             W  A     +    A  
Sbjct: 311 GERDQETALRFVTEAIEAKGEALGPKDLWMFNNRGILLRRQGNWREAAENYRKALSIAP- 369

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              + A L     + +A+  D   +     E+LKL  + 
Sbjct: 370 ---SDAGLRYNLGVAHAEGKDYYTALTHFEEALKLDPDL 405



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 85/286 (29%), Gaps = 21/286 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A ++           +    +LL   +ALA+  +  A    +   +        +
Sbjct: 173 GDLDQAARV--AAKAFEIKPDSLKAHLLLGDVALAKGDHAQAESHYKDAARAEKLYIEPL 230

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216
             L     + GD        T+  ++SP        + + Y+   E  +A  F  + +K 
Sbjct: 231 KRLVEVYTQTGDDAKRLACLTRLDELSPLNFERKAVIGEAYLDLGENDKARAFFEEARKV 290

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASY--HDAIESLKLCDNSIMASIC----AAKSL 270
             K  +   +  L+  +    ++    A     +AIE+           +         L
Sbjct: 291 VGKVASDMVSDALMEMAKRIGERDQETALRFVTEAIEAKGEA--LGPKDLWMFNNRGILL 348

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKE--- 323
             Q   R+A     K   + P  +    Y     H   ++    L       +++ +   
Sbjct: 349 RRQGNWREAAENYRKALSIAPS-DAGLRYNLGVAHAEGKDYYTALTHFEEALKLDPDLLL 407

Query: 324 -SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
                   ++        +  A       +K  P  +    LLA +
Sbjct: 408 QGPTVGYNIATAYHRCRDLPAAREFLAQTLKRHPGYEPARRLLAHL 453


>gi|124024756|ref|YP_001013872.1| hypothetical protein NATL1_00431 [Prochlorococcus marinus str.
           NATL1A]
 gi|123959824|gb|ABM74607.1| Hypothetical protein NATL1_00431 [Prochlorococcus marinus str.
           NATL1A]
          Length = 435

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 10/157 (6%)

Query: 128 QIAL--AERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           Q      +     A +  + ++       R F+ Y    +    G    A+    KA+++
Sbjct: 51  QAIQFHLKGNIPKATKYYQQLINQECNDYRVFSNYGAILQGL--GKSKEAEASLRKAVEL 108

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +PD       +        ++  A   L +      E N N A+      +   D G + 
Sbjct: 109 NPDLAESHSYLGNLLNDLGKFKEAEASLRKAV----ELNPNLALAHAYLGILLNDLGQLK 164

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            +     +++KL   S+ A    +  L    +K++AE
Sbjct: 165 EAEASLKKAIKLKFGSVKAYDALSNVLNKLGRKKEAE 201



 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G    +     ++++L  +   +       L    K ++AE  L K  ++NP+  +A+ Y
Sbjct: 93  GKSKEAEASLRKAVELNPDLAESHSYLGNLLNDLGKFKEAEASLRKAVELNPNLALAHAY 152

Query: 300 THLLSEN------TVGKLKRALRL 317
             +L  +          LK+A++L
Sbjct: 153 LGILLNDLGQLKEAEASLKKAIKL 176


>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 550

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 4/175 (2%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           + Y +Y L   I         A E  +  LQ       A ++L     ++  + +A+   
Sbjct: 132 DPYEIYNLLGIIYERNNMDEKAEEYYKKCLQTNENYLGAYFNLAQVYYKLNKMQNAKLCL 191

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            KA  I P  P V   + Q     ++W +AI +  +  +   +     A+  +  +    
Sbjct: 192 EKASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIE--IDPENINALFELGVTQFQI 249

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++ D   + H+  ++L +  +   A     +   S +    A+  LE+  K+ PH
Sbjct: 250 EELD--EAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQPH 302



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 93/251 (37%), Gaps = 7/251 (2%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                F +E  V+    Q+      +  A    E  ++I      A++ L     +I +L
Sbjct: 193 KASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIEIDPENINALFELGVTQFQIEEL 252

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A     K L I PD       +V+ Y  A     A  +L Q  K     +  +A L++
Sbjct: 253 DEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQP--HNVKANLIL 310

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
             +     +  ++ +     + +K+   +  A          +N  +KA  I +++ ++N
Sbjct: 311 --AGIYLAQKMILEAKQLCEQVIKVDSRNADALYYLGIIYQKENNIQKAISIFKEVTQIN 368

Query: 291 PHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P   IA I     +         +    R+ ++   +  +L  +S +  E+G  +QA   
Sbjct: 369 PTKYIAQIQLGQLYHQQGKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELL 428

Query: 348 AMLAMKIAPRK 358
              A+ + P  
Sbjct: 429 CKKALAVDPNA 439



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q+   + +   A    + +LQ+     FA+  L F    +GD N A+    KAL + P+
Sbjct: 379 GQLYHQQGKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKALAVDPN 438

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-----DKGD 241
           A      +   Y     + +AI F     K+  +          A +  N      +KG+
Sbjct: 439 AYEPYHNLGLIYQDKLLYEQAIKFYQSALKSNPD---------CAEAYNNLGCIYYEKGN 489

Query: 242 MIASYHDAIESLKLCDNSIMA 262
           +  + +   E++K       A
Sbjct: 490 LKEAINQFEEAIKANPKFAEA 510


>gi|313148154|ref|ZP_07810347.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
 gi|313136921|gb|EFR54281.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
          Length = 478

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 22/207 (10%)

Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             A  +  K +D +P  P  WV  A  +     K++ +A+   +      +E+    A +
Sbjct: 188 EKATFFYNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAVESCDFAIAADEEFG--EAHI 243

Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLIS-----QNKKRKAEVI 282
           + A SL + +  +  IA Y  A+E   L        I  A +            R A   
Sbjct: 244 IKAHSLFHLENIEGAIAEYQKALEYKTLSPEFTYMFIGLAYAHQENWAEAAESYRLALQA 303

Query: 283 LEKIWKVNPHPEIANIYT-------HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           +E+       P +++IY+       HL       +L R ++  E+  +  E  ++  +I 
Sbjct: 304 IEES-GNGSSPLLSDIYSNKAVCASHLGDSAEAHRLCRLVK--ELAPQDAEPYLLEGRIY 360

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +E G+ DQA A+  LA++ AP  + ++
Sbjct: 361 MEEGNFDQARAEWALALRYAPEADTWM 387


>gi|219122591|ref|XP_002181625.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406901|gb|EEC46839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 640

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 21/215 (9%)

Query: 156 AVYSLYFES--CRIGDLNSAQRYAT--------KALDISPDAPWVTEAVVQQYVLAKEWS 205
               +Y  +      D   A   A         +  D +    W            K W 
Sbjct: 323 GRRHVYDRAFENASDDFEQAYALAETNEVQLLLEGDDYARVLEWTGMV--------KHWR 374

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
             +   +   +   +     A++L+  +    D      +      +L L   +  A + 
Sbjct: 375 YKLDEASACYEKCADLEPTNALVLVKNAGVKMDGSHQDEAMKLFDTALGLDPKNADALLH 434

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINK 322
            A   + Q K  +A+  LE    V P   +A          +       K     E++  
Sbjct: 435 RANLRLLQTKPDEAKEDLEACIAVRPDHIMARLRLASILAATNEAAKAKKHLDAAEKVEP 494

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +S E      ++    G  DQA A+   A+ + P 
Sbjct: 495 KSSEVQSYRGELHFTQGEFDQARAQFEKAIALDPT 529


>gi|67968584|dbj|BAE00651.1| unnamed protein product [Macaca fascicularis]
          Length = 594

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   +    K  +   ++  
Sbjct: 229 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 285

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L+  D    + +     ++++    S+   I AA+        R  + +L K 
Sbjct: 286 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 337

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 338 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 390

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I++  A++E+A + NT  +      A+ ++ 
Sbjct: 391 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 436


>gi|309358159|emb|CAP34526.2| CBR-OGT-1 protein [Caenorhabditis briggsae AF16]
          Length = 1184

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G ++ A+    KAL++ P        +        +   A     +  +   
Sbjct: 436 LANALKERGSVSEAETMYLKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYP 495

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E+    A      +     +G +  +     E++++      A      +L        A
Sbjct: 496 EF----AAAHSNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSA 551

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A+I+      N    ++      ++  +  ++   ++
Sbjct: 552 IACYNRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYGTALKLKPDFPDAFCNLA 607



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A  M+    +    H +    L    I   + +   A       L+I      A 
Sbjct: 444 GSVSEAETMYLKALELCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 501

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ ISP        +        + S AI   N+  + 
Sbjct: 502 SNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSAIACYNRAIQI 561

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G+M  +      +LKL  +   A    A  L
Sbjct: 562 NPAF----ADAHSNLASIHKDAGNMAEAIQSYGTALKLKPDFPDAFCNLAHCL 610


>gi|297848776|ref|XP_002892269.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338111|gb|EFH68528.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 809

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  L   +    +W      + +   +    +G ++++     E+  LC     A     
Sbjct: 293 LLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLG 352

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +L    + R A   LE+   + P     H ++A+   H + E+    ++   R  ++  
Sbjct: 353 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHSMGEDERA-IEVFQRAIDLKP 410

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++L  +  + +++G   +A       + + P      L   +    +  T++     
Sbjct: 411 GHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRAL 470

Query: 383 QSALH 387
           + AL 
Sbjct: 471 KEALK 475



 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              RA+ L+  +L     G+  A+     E++ L  +   A    A SL S  +  +A  
Sbjct: 343 THFRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIE 400

Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331
           + ++   + P H +    +  +Y  L      G+ +RA       L         + +  
Sbjct: 401 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNK 453

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   L  G  ++A      A+K+  R
Sbjct: 454 AVSLLGAGETEEAKRALKEALKLTNR 479


>gi|291566529|dbj|BAI88801.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1065

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 94/258 (36%), Gaps = 31/258 (12%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +++ A +  +  + +     ++  +L     ++   + A +    A+ +  D  W    +
Sbjct: 153 RWDEAIKAYKDAIALEPEFFWSHNNLGDALLQLERWDEAAQAYQNAIGLKDDFGWSHYNL 212

Query: 195 VQQYVLAKEWSRAITF-------------LNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            +     + W  AI               +++K  +A  +     +  I+++ E A + +
Sbjct: 213 GEALSKLQRWDEAIKAYKDAIEIKSDLPCIHEKLGDALRYQVPPNLEEISQAYEQAIQAN 272

Query: 242 M--IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
              +  Y+ A+E+          S+  A +  SQ +  KA    +   K+ PH    N  
Sbjct: 273 PQDLQIYYRALEAN---PKDAKISLMLADAFRSQGQLDKAVTFYKSTLKIEPH----NAE 325

Query: 300 THLLSENTVGKLKRA-------LRLEEINKESVESLVIVSKIALEMG-SIDQAHAKAMLA 351
            H+   + +    R         +  +   +  +  + +    +E G  + +A A     
Sbjct: 326 IHIKLGDILLIKGRFTEAVGYLQQAADFQGDDPQLQLGLGVALVEAGTDLHRAEASLRRT 385

Query: 352 MKIAPRKE-IFLLLAQIE 368
           +++ P +   +  L ++E
Sbjct: 386 LELQPDQGEAYFYLGKLE 403



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 25/233 (10%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPD 186
           Q A  +                P  +      L       G DL+ A+    + L++ PD
Sbjct: 349 QAADFQGD-------------DPQLQL----GLGVALVEAGTDLHRAEASLRRTLELQPD 391

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  + +   L   W  A+    +  +   +       L +A +LE    G    + 
Sbjct: 392 QGEAYFYLGKLEGLRGRWDEALAMYRRSWEINPQVGEWG--LALAEALEKL--GRWSEAV 447

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSE 305
               + +     S  AS+   ++L+   +  +A V L +  K+    PE+  ++  +L E
Sbjct: 448 DQYRQVVLELGESGEASLGLGRALVQLERPVEAVVELRRAVKLGVDRPEVHRLWAGVLVE 507

Query: 306 --NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  +++   L E    + +    ++   + +G   +A A+     ++AP
Sbjct: 508 LGRWPDVVEQWQWLLERYPGAADIRRRLALALMGLGRWPEAAAQWGEYWRVAP 560


>gi|256072451|ref|XP_002572549.1| heat shock protein 70 [Schistosoma mansoni]
 gi|238657709|emb|CAZ28781.1| heat shock protein 70 (hsp70)-interacting protein, putative
           [Schistosoma mansoni]
          Length = 700

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 94/267 (35%), Gaps = 17/267 (6%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRI----GDLNSAQR 175
           + LL         +   A E+ + +  + +     V   +L   +C       D+ +   
Sbjct: 402 ISLLHATYQALAGRSEEAKERFQNIGMVDSGASLVVRVNALIKSACLSMSVDQDVAACLY 461

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR 232
              +A ++ P+ P V     Q  +LA +   A+  LN   K   E+      R   L   
Sbjct: 462 DFQRAQNVWPECPDVYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQRLYTLYRC 521

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +L   D   + +   +    +K   N +      A+ L  +   ++++ I   +  +   
Sbjct: 522 ALTAGDISKVDSRIEEFRRLVKKYPNCLETHSLFAQILSERGDFKESDKIFADLITLA-- 579

Query: 293 PEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           P+    Y H         ++    L   +   + + +      ++ ++++E G  ++A  
Sbjct: 580 PDSGLAYAHRGLLQLKWKQDRDAALCFFIEGIQKDPKCELIHELLGQLSVEKGQFNEALK 639

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSH 373
              +A+K A  +     L  + +  + 
Sbjct: 640 HFDMAIKQAKTQNDLSHLIALREGVNA 666



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 4/132 (3%)

Query: 94  SIAAHNIPLARKMHSYVSQQ-HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA 151
           ++ A +I           +    + N    + L  QI      +  + +    ++   P 
Sbjct: 522 ALTAGDISKVDSRIEEFRRLVKKYPNCLETHSLFAQILSERGDFKESDKIFADLITLAPD 581

Query: 152 TREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           +    A   L     +  D ++A  +  + +   P    + E + Q  V   +++ A+  
Sbjct: 582 SGLAYAHRGLLQLKWKQ-DRDAALCFFIEGIQKDPKCELIHELLGQLSVEKGQFNEALKH 640

Query: 211 LNQKKKNAKEWN 222
            +   K AK  N
Sbjct: 641 FDMAIKQAKTQN 652


>gi|170732852|ref|YP_001764799.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169816094|gb|ACA90677.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia
           MC0-3]
          Length = 275

 Score = 46.5 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 47/163 (28%), Gaps = 14/163 (8%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL      A  QY+        +L  P         L   +   GD   A +   +
Sbjct: 90  PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLEQ 148

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++P        +    +   + + A   L +      E  +    +L    L     
Sbjct: 149 ATALAPTDAATLSDLAYSKMREGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLAT 204

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           G    +    ++  KL          A +S I  ++ + A  +
Sbjct: 205 GHAKDARRL-MDQQKLSP--------AVRSQIRDDETKVAAAM 238


>gi|326317963|ref|YP_004235635.1| HemY domain-containing protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323374799|gb|ADX47068.1| HemY domain protein [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 425

 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 50/413 (12%), Positives = 115/413 (27%), Gaps = 38/413 (9%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   + +  +    + + +   +    V++ W       S   +L + +           
Sbjct: 1   MRAALWFLVLFGTAVAAALFAGNNQGTVTLFWPPYRVDLSLNFVLLLFFGGFAILYAALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
                L  P        ++     + AL   L  + A     +RK       Q       
Sbjct: 61  ALSALLELPGQARRWRVQQKERSMHAALLDALSQLLAGRFLRSRKAAMAALAQENALEAA 120

Query: 121 ------------LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVY-SLYFE 163
                       L +L+  + + A +        L   L     R    E  +       
Sbjct: 121 GEAVPHGRQLRTLAHLVAAESSHALQDRATREAHLRNALDNIPARAPVSELELREGAQLR 180

Query: 164 SCR----IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           + R      D  +A  +       +        A ++   L+ +   A+       K+  
Sbjct: 181 AARWSLDERDAATALEHLAALPQGAARRTLALRARLKATRLSHQTQEALETARLLGKHRA 240

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRK 278
                   ++   ++E  +     A       + +  + ++   +I AA+ L +      
Sbjct: 241 FSPAAAQSIVRGLAIELLNGAHDPAQLQQTWMAFEPAERAMPELAIHAAQRLTALGGDHG 300

Query: 279 AEVI-LEKIWK-----VNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVES 327
                L   W+      +P P+   +    + E+ +       L R    ++ N      
Sbjct: 301 QVRTWLLPAWERMVDAADPLPDAHALKLVRVLESNLDALDAAWLARIESAQQANPRDARL 360

Query: 328 LVIVSKIALEMGSIDQAHA---KAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376
             +     L      +A     +A   +   P R   +  LA++ +    +T+
Sbjct: 361 QYLSGMACLRRQLWGKAQQLFTQAAQQLDEGPLRCRAWRHLAELAE-QRGDTE 412


>gi|254786362|ref|YP_003073791.1| hypothetical protein TERTU_2356 [Teredinibacter turnerae T7901]
 gi|237685879|gb|ACR13143.1| TPR domain/sulfotransferase domain protein [Teredinibacter turnerae
           T7901]
          Length = 526

 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/221 (10%), Positives = 66/221 (29%), Gaps = 43/221 (19%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +   GDL +   Y    L  +P        +        +  +A+  +++      + 
Sbjct: 13  IAALNRGDLRAVHNYCESILGANPAHADAWFLLAMVAANTGKLQQALELIDKALSITPQV 72

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRK 278
               A  L  ++          A+   A +++ L       ++         I+     +
Sbjct: 73  ----ADYLAQKAKLLTMLRHDKAARTCADKAVALNPQ---GALLLDTLGVVYINLGDYAR 125

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A  +L K                                  +  E ++    ++     +
Sbjct: 126 ARELLNKA-------------------------------VALKPEHLQFRFNLATAEQFL 154

Query: 339 GSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
           G++  A A  + A++I P     +  L+++ +  + +  ++
Sbjct: 155 GNLIVAKAHYLKAIEIKPNYARAYWALSELNK-ENLDGSRV 194


>gi|148360062|ref|YP_001251269.1| methyltransferase [Legionella pneumophila str. Corby]
 gi|296108117|ref|YP_003619818.1| hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148281835|gb|ABQ55923.1| methyltransferase [Legionella pneumophila str. Corby]
 gi|295650019|gb|ADG25866.1| Hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 577

 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%)

Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  Q      E     A    E  + Q P  T       L +   ++GD+ +A  Y  +A
Sbjct: 8   LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             I+P+   +   +   Y  A +   AI +  Q  +   E+ +    L    +L N    
Sbjct: 66  RKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
           +   + H  + ++    +   A       L+   +   A+     +  +NP H E A  Y
Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHRE-AQFY 180

Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               HL         +   ++ E + E V+SL+ +  IAL+      A      A+ + 
Sbjct: 181 LGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239


>gi|52842693|ref|YP_096492.1| TPR domain-containing protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629804|gb|AAU28545.1| TPR domain protein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 571

 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%)

Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  Q      E     A    E  + Q P  T       L +   ++GD+ +A  Y  +A
Sbjct: 8   LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             I+P+   +   +   Y  A +   AI +  Q  +   E+ +    L    +L N    
Sbjct: 66  RKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
           +   + H  + ++    +   A       L+   +   A+     +  +NP H E A  Y
Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHRE-AQFY 180

Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               HL         +   ++ E + E V+SL+ +  IAL+      A      A+ + 
Sbjct: 181 LGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239


>gi|109899147|ref|YP_662402.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
 gi|109701428|gb|ABG41348.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
          Length = 940

 Score = 46.5 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 81/259 (31%), Gaps = 37/259 (14%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A ++   + Q H  H   L  LL  +I     ++++A E+ + +L +      A 
Sbjct: 531 GDADEAFRLLRLILQDHRLHVPSL--LLSAKINYEREEFDLAVERYKTVLSVSIRNVKAH 588

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L   + +  +   A     K L + PD        VQ + +  E S A   L++    
Sbjct: 589 EGLLLVALKKHNSKDALYQVDKLLALDPDNIKYIVQKVQLHQIRDETSNATKMLDK---- 644

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                RN    L A +    ++G+   +     ++  L  +                  +
Sbjct: 645 LAFLGRNNPQALFALAKLYVNQGENQKALAALTQAQTLAPD----------------NAQ 688

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            A  ++E                 L +  +     R   L E          +  + A +
Sbjct: 689 LALQVIE---------------LMLNNHLSKEAKPRIDELAERFPSLANVPFMRGRAAEQ 733

Query: 338 MGSIDQAHAKAMLAMKIAP 356
              I  A      A+K+ P
Sbjct: 734 EQDIATAQRMYEYALKLDP 752



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 19/207 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R   L  A   A +AL + P        +   + L  +   A   L    ++    +R  
Sbjct: 495 RQNHLEQALSTAQRALKLQPSMVAAQYNLANIWHLQGDADEAFRLLRLILQD----HRLH 550

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEV 281
              L+  +  N ++ +   +       L +   ++ A     + A K   S++   + + 
Sbjct: 551 VPSLLLSAKINYEREEFDLAVERYKTVLSVSIRNVKAHEGLLLVALKKHNSKDALYQVDK 610

Query: 282 ILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +L         P+     +  +  H + + T    K   +L  + + + ++L  ++K+ +
Sbjct: 611 LLALD------PDNIKYIVQKVQLHQIRDETSNATKMLDKLAFLGRNNPQALFALAKLYV 664

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             G   +A A    A  +AP      L
Sbjct: 665 NQGENQKALAALTQAQTLAPDNAQLAL 691


>gi|330921312|ref|XP_003299369.1| hypothetical protein PTT_10345 [Pyrenophora teres f. teres 0-1]
 gi|311326952|gb|EFQ92505.1| hypothetical protein PTT_10345 [Pyrenophora teres f. teres 0-1]
          Length = 266

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 74/268 (27%), Gaps = 41/268 (15%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPA---TREFAVYSLYFESCRIGDLNS 172
           +  +  L++   + LA      A    +  + + P    T             +IG    
Sbjct: 28  DTPVSQLIKDASVQLATGNTQDALAYFDIAISRDPRNYLTYF--RRG--AAYLQIGRTTQ 83

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    K L++ P          +      +W  A        K  +      A      
Sbjct: 84  AQHDFDKVLELKPGFEGALVQRAKIRARKADWEAARKDYEAAGKTDEIAQLEEAQGAAMM 143

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + E ADKGD  +   +A  +           +  A   I + + R               
Sbjct: 144 AQEAADKGDWDSCISNAGTA---------IVVAGAAYDIRKTRAR--------------- 179

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLA 351
                          V  +     L +IN   +   +   +     +G  ++        
Sbjct: 180 -------CRFEKGEVVEGISDLQHLLQINTGDITPHLQSSAMAFYSLGETEKGIKHIAQC 232

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           ++  P  ++ + L + E+    +  K+ 
Sbjct: 233 LQSDPDSKVCMKLRRREKNLEKDIQKVR 260


>gi|262198282|ref|YP_003269491.1| hypotheticalprotein [Haliangium ochraceum DSM 14365]
 gi|262081629|gb|ACY17598.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365]
          Length = 288

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 70/198 (35%), Gaps = 13/198 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G  ++A     +A+  +P       ++   Y   +++ +A+    +    + +    
Sbjct: 46  KQQGKSDAAISAFQQAVAANPKHAMAWASLGHLYKDKRDYKKAVDAYERATAISDD---- 101

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+L     +       +  +      S +L   S   +         +    KA   L 
Sbjct: 102 NALLWSNLGMAYYRAKRVDDAQRALERSFQLDSKSADVNANLGTLYRQRGDIEKALRHLR 161

Query: 285 KIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
              K++P     H  +A  Y      +    +L++A+RL+        +L +V +     
Sbjct: 162 FAVKLDPKSAVYHSNLAIAYRSNKQYDEAEQELRQAIRLDAKEPSYQFNLGVVYR---YQ 218

Query: 339 GSIDQAHAKAMLAMKIAP 356
             +D+A A    A+++ P
Sbjct: 219 EKVDEAIAAYTRAVRLDP 236


>gi|192359864|ref|YP_001981168.1| TPR domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190686029|gb|ACE83707.1| TPR domain protein [Cellvibrio japonicus Ueda107]
          Length = 608

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 106/312 (33%), Gaps = 48/312 (15%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRI 167
                F +E L  LL  + A   R Y++A           + P   E A       +  +
Sbjct: 74  RNDRAFDSETLYSLLAAEFAGNRRLYDLALSNYAQQARQTRDPQIAERAT----LLARYL 129

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----- 222
           GD ++A   A   +D +PD            + A +  +A     +  +  +  +     
Sbjct: 130 GDKDTALEAAQIWMDAAPDNREALSNQALAQLEAGQLHQAFASSQRLLEQGETPHFQVIA 189

Query: 223 -------------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                                    +N   LL+   L    +GD   +   A  +LKL  
Sbjct: 190 AQANTLSKAEHDQLLAEFQSLLKTHKNNEQLLVGTGLLLEQQGDYPQAMTLARRALKLAP 249

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKL-KR 313
            S+  +I  A  L    + ++A   +E    +  HP+   +   Y  +LS N +    ++
Sbjct: 250 RSLPPAILEANLLHLLKRDQEAIAKMED--LLALHPDNHRLRYQYARILSHNDLAAAQQQ 307

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQA 370
              L +    + +  + +  +AL+    + A       +++         +  L Q+ +A
Sbjct: 308 FALLTQQLPHNGDIWLSLGIVALQREDQETAERAFEALVELGQHKNTANFY--LGQMSEA 365

Query: 371 NSHNTDKILYWT 382
             +  + +LY+ 
Sbjct: 366 AGNPDEALLYYL 377



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 98/294 (33%), Gaps = 24/294 (8%)

Query: 85  YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-QYNIAHEK 142
            +AL    L  + A  +  A    +   +           ++  Q     + +++    +
Sbjct: 150 REALSNQALAQLEAGQLHQA---FASSQRLLEQGETPHFQVIAAQANTLSKAEHDQLLAE 206

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ---QYV 199
            + +L+     E  +        + GD   A   A +AL ++P +  +  A+++    ++
Sbjct: 207 FQSLLKTHKNNEQLLVGTGLLLEQQGDYPQAMTLARRALKLAPRS--LPPAILEANLLHL 264

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
           L ++   AI  +        + +R R      +        D+ A+        +   ++
Sbjct: 265 LKRD-QEAIAKMEDLLALHPDNHRLR-----YQYARILSHNDLAAAQQQFALLTQQLPHN 318

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
               +      + +  +  AE   E + ++  H   AN Y   +SE      +  L   +
Sbjct: 319 GDIWLSLGIVALQREDQETAERAFEALVELGQHKNTANFYLGQMSEAAGNPDEALLYYLQ 378

Query: 320 INKESVESLVIVSKIAL-----EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
           +N     S  + ++  L     + G  D AH          P     L + + E
Sbjct: 379 VNGG---SDFLAAQARLLDIFMQRGEYDAAHQHINRQSLRQPEHAAILFMLEAE 429


>gi|116179800|ref|XP_001219749.1| hypothetical protein CHGG_00528 [Chaetomium globosum CBS 148.51]
 gi|88184825|gb|EAQ92293.1| hypothetical protein CHGG_00528 [Chaetomium globosum CBS 148.51]
          Length = 895

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 84/272 (30%), Gaps = 44/272 (16%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
              LN A+R   +A   +PD   +  A V+         +A   L   ++NA        
Sbjct: 577 EKALNEARRVLARAFKQNPDNEDIWLAAVKLEADNGFIDQARDLLKTARQNAPTDRVWMR 636

Query: 227 ILLIARSLENADKG-------------------------DMIASYHDAIES----LKLCD 257
            +   R L   +                           D +     A E+    ++   
Sbjct: 637 SVAFERQLGANEAALDLVQDALQLFPAAPKLWMMKGQIYDDLEKLPQAREAYSTGVRAVP 696

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALR 316
           +S+   +  ++         KA  +L++  +  P  PE+      +  E   G   +A  
Sbjct: 697 SSVPLWLLYSRLEERSGNVVKARSVLDRARQAVPKSPELWTELIRV--ERRAGNANQAKS 754

Query: 317 L-EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQANSHN 374
           L     ++  +S ++ ++  L + +  Q       A+K      +  + A  I  A    
Sbjct: 755 LMASALQQMPKSGLLWAERILHLEARTQRKTLITEAIKKVEDDPVLQVTAARILWAERK- 813

Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406
            D+   W + AL             ++   W 
Sbjct: 814 LDRAQNWFERALLLDR---------HIGDTWA 836


>gi|257062034|ref|YP_003139922.1| hypothetical protein Cyan8802_4301 [Cyanothece sp. PCC 8802]
 gi|256592200|gb|ACV03087.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 363

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 84/265 (31%), Gaps = 11/265 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +     N   A K +         +N    Y L   +A      N A      +   P
Sbjct: 83  GYLYAQKGNFRQAVKAYQQAVTLD-PNNADFYYALGFSLANIGDNENAASAYYYAIQLAP 141

Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T+      L     R  D   A     + + + P+       +    +  KE  +AI 
Sbjct: 142 RVTK--NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQ 199

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +LN   K        R +L  A      ++ +   +++    + ++   +    +   + 
Sbjct: 200 YLNNAVKRFPNDLELRLLLATA----FLEQDNNELAFNQLKSAERISPGNPKVQLKIGRI 255

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVE 326
           L  QNK   A    ++I  ++P    A        L +++ +G +     L  +  E+ E
Sbjct: 256 LEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLATKDYLGAVITYRELASMLPETPE 315

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
               +     E G   +A      A
Sbjct: 316 PYYYLGLAYKERGRKKEATKALEQA 340



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 42/258 (16%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE--MMLQIPATREFAVYS 159
           A+     +  Q +  +E L  LL   +  +  + YN A    E   +L     + F+   
Sbjct: 24  AQLQPPLILAQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKAAILDGNNAKIFSGIG 83

Query: 160 -LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            LY +    G+   A +   +A+ + P+      A+        +   A +      + A
Sbjct: 84  YLYAQK---GNFRQAVKAYQQAVTLDPNNADFYYALGFSLANIGDNENAASAYYYAIQLA 140

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
               +      I   +    + D   +       + L  N+  A      SLI Q +  K
Sbjct: 141 PRVTK----NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDK 196

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A   L                           +KR           +E  ++++   LE 
Sbjct: 197 AIQYLNNA------------------------VKRF-------PNDLELRLLLATAFLEQ 225

Query: 339 GSIDQAHAKAMLAMKIAP 356
            + + A  +   A +I+P
Sbjct: 226 DNNELAFNQLKSAERISP 243


>gi|189200909|ref|XP_001936791.1| DNAJ domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983890|gb|EDU49378.1| DNAJ domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 518

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 76/268 (28%), Gaps = 41/268 (15%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPA---TREFAVYSLYFESCRIGDLNS 172
           +  +  L++   + LA      A    +  + + P    T             +IG    
Sbjct: 28  DTPVSQLIKDASVQLATGNTQDALTYFDIAISRDPRNYLTYF--RRG--AAYLQIGRTTQ 83

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    K L++ P          +      +W  A        K  +      A      
Sbjct: 84  AQHDFDKVLELKPGFEGALVQRAKIRARKADWEAARKDYEAAGKPDEIAQLEEAQGATMV 143

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + E ADKGD  +   +A  ++ +   +       A+    + +                 
Sbjct: 144 AQEAADKGDWDSCITNAGAAIVVAGAAYDIRKIRARCRFEKGEV---------------- 187

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLA 351
                     +S+           L +IN   +   +   +     +G  ++        
Sbjct: 188 -------VEGISD--------LQHLLQINTGDITPHLQSSAMAFYSLGETEKGIKHIAQC 232

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           ++  P  ++ + L + E+    +  K+ 
Sbjct: 233 LQSDPDSKVCMKLRRREKNLEKDIQKVR 260


>gi|114890|sp|P19450|BCSC1_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|141734|gb|AAA21886.1| bcs C protein [Gluconacetobacter xylinus]
          Length = 1319

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 86/289 (29%), Gaps = 26/289 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
              I  A + +  +  +   +   L+ L   ++ +A+     A + L   +      +  
Sbjct: 418 TGQIAAAEQEYRGILSREPNNQLALMGL--ARVDMAQGNTAEARQLLSR-VGPQYASQVG 474

Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              V  L   + +  D         +A+  +P  PWV   +        + + A   +  
Sbjct: 475 EIEVSGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQP 534

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS-ICAAKSLI 271
              N       +A +L      N      + +         L   +   A    A +  I
Sbjct: 535 ILANPVTAQDRQAGILYTYGSGNDAMTRQLLA--------GLSPADYSPAIRSIAEEMEI 586

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            Q+   +  ++       NP P I    T    + T  +      L     + V + + +
Sbjct: 587 KQDLASRLSMV------SNPVPLIREALT--QPDPTGARGVAVADLFRQRGDMVHARMAL 638

Query: 332 SKIALEMGSI--DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
              +     +  DQ  + A   MKI+       LLA +       T   
Sbjct: 639 RIASTRTIDLSPDQRLSYATEYMKISNPVAAARLLAPLGDGTGSATGSA 687



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 16/163 (9%)

Query: 133 ERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             +   A +  +  LQI            L   S R GD   A+RY  +A+   P     
Sbjct: 304 AGRLAAAEQSFQSALQINSHDADSLGGMGLV--SMRQGDTAEARRYFEEAMAADPKTADR 361

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL------IARSLENADKGDMIA 244
               +    ++ E++     +   +    E  +  A L          +L  AD      
Sbjct: 362 WRPALAGMAVSGEYASVRQLIAAHQYT--EAKQQLATLARQPGQYTGATLMLADLQRSTG 419

Query: 245 SYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283
               A +  +   +    +  A    A+  ++Q    +A  +L
Sbjct: 420 QIAAAEQEYRGILSREPNNQLALMGLARVDMAQGNTAEARQLL 462



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 110/351 (31%), Gaps = 57/351 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GLM+ A+     ARK+            +  V +        +     A   ++ +L  P
Sbjct: 480 GLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQPILANP 539

Query: 151 AT---REFAV---YSLYFESCRIG--------DLNSA-QRYATK-------ALDIS---- 184
            T   R+  +   Y    ++            D + A +  A +       A  +S    
Sbjct: 540 VTAQDRQAGILYTYGSGNDAMTRQLLAGLSPADYSPAIRSIAEEMEIKQDLASRLSMVSN 599

Query: 185 --PDAPWV----------TEAVVQQYVLAKEWSRAITFL------------NQKKKNAKE 220
             P                 AV   +    +   A   L            +Q+   A E
Sbjct: 600 PVPLIREALTQPDPTGARGVAVADLFRQRGDMVHARMALRIASTRTIDLSPDQRLSYATE 659

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIM-ASICAAKSLISQNKKRK 278
           + +    +  AR L     G   A+    + E ++      M  S+  +  L  +  + +
Sbjct: 660 YMKISNPVAAARLLAPLGDGTGSATGSALLPEQVQTLQQLRMGISVAQSDLLNQRGDQAQ 719

Query: 279 AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A   L    + +P    P++A    +         L+  L +   N + +++     + A
Sbjct: 720 AYDHLAPALQADPEATSPKLALARLYNGHGKPGKALEIDLAVLRHNPQDLDARQAAVQAA 779

Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +       A   AM  ++ +P     +L +A  +QA+ H    I    + A
Sbjct: 780 VNSDHNSLATRLAMDGVQESPMDARAWLAMAVADQADGHGQRTIED-LRRA 829


>gi|149928273|ref|ZP_01916516.1| hypothetical protein LMED105_15344 [Limnobacter sp. MED105]
 gi|149823002|gb|EDM82244.1| hypothetical protein LMED105_15344 [Limnobacter sp. MED105]
          Length = 406

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 12/184 (6%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +          RE A Y L  +  R G L+ A++ A  +L  S     
Sbjct: 84  GEIDRAIRVHQFLTTREQITLADREKATYELGVDFLRAGILDRAEQ-AFHSLSGSDMKAE 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
            +  +++ Y L K W +AI   ++ ++   E      A      + +  D GD++ +  +
Sbjct: 143 ASRQLLELYELEKAWDKAIAQAHKLREYGAEVPAGDIAHFYCELAAQFIDAGDLLKAKAE 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHL 302
              +L     ++ AS+       +QN+  +A        + NP       P +   +  L
Sbjct: 203 LQNALLTDAQNVRASLLLGDIYFTQNQFEEAIGQWRAAERQNPWYLPLVGPNMWAAFKKL 262

Query: 303 LSEN 306
             E 
Sbjct: 263 EREE 266


>gi|297569136|ref|YP_003690480.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925051|gb|ADH85861.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 592

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 98/275 (35%), Gaps = 21/275 (7%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L+   I  +  +   A E LE ++          Y L      +G +  A     +AL
Sbjct: 164 AMLMLAVIYGSSDRRQEAREILEQLVADQPAYFLGHYYLARLYHDLGLIEQALGAYERAL 223

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           +++  AP   E +   Y  A  +  ++  L +         R R++L         ++ +
Sbjct: 224 ELNWSAPLAQE-LAAIYEAAGLYEDSLALLRRMVAKNPADERARSLLADLYLR--LERVE 280

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IA 296
              +   A+       + +   +  A+ L+ + +  +A V+L+ +    P  +     + 
Sbjct: 281 EALAELTALRPYSRDVDRV--DLTMARILLDEQRYEEAVVLLQGLLADEPRLDAVRSLLV 338

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAHAKAMLAM- 352
             Y  L   +    L     LEEI        E+++++++I    G    A A    A+ 
Sbjct: 339 LAYYRLGKIDLARNL-----LEEIRPGDYGYEEAVLMLARIYHGSGQPVAAEAVLERALA 393

Query: 353 -KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
                    ++ LA +     H+  + L   Q AL
Sbjct: 394 DSQHRYLSFYVTLA-LLHIEWHDAGQGLAIFQRAL 427



 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 15/257 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A    +Y+ A    +  L         +  L     +  +   A  +  + + I P   
Sbjct: 69  SAELGGRYDEARYAYQQALLCDRKAVHVMRRLAMLLLQQQEREQAIYWVRRIIAIDPTDL 128

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYH 247
                + + Y    +  RA     +    +    N    + +I  S +   +   I    
Sbjct: 129 AARSLLAKLYTALDDPDRAAAVYQEILTLDPGNANAMLMLAVIYGSSDRRQEAREILEQL 188

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIY-THL 302
            A +         +     A+         +A    E  LE  W      E+A IY    
Sbjct: 189 VADQ-----PAYFLGHYYLARLYHDLGLIEQALGAYERALELNWSAPLAQELAAIYEAAG 243

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA-MKIAPRKEIF 361
           L E+++  L+R   +   N     +  +++ + L +  +++A A+             + 
Sbjct: 244 LYEDSLALLRR---MVAKNPADERARSLLADLYLRLERVEEALAELTALRPYSRDVDRVD 300

Query: 362 LLLAQIEQANSHNTDKI 378
           L +A+I        + +
Sbjct: 301 LTMARILLDEQRYEEAV 317



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 9/238 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKA 180
           V L   +I L E++Y  A   L+ +L     R  AV SL   +  R+G ++ A+    + 
Sbjct: 299 VDLTMARILLDEQRYEEAVVLLQGLLADEP-RLDAVRSLLVLAYYRLGKIDLARNLLEEI 357

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                        + + Y  + +   A   L +   +++    +  + L    +E  D G
Sbjct: 358 RPGDYGYEEAVLMLARIYHGSGQPVAAEAVLERALADSQHRYLSFYVTLALLHIEWHDAG 417

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
             +A +  A++ L             A  L        A   ++++  ++PH   A  Y 
Sbjct: 418 QGLAIFQRALQDLGPEPEVY---FEYAVYLDRVGDSEGALAKMQEVIALDPHDPYALNYV 474

Query: 301 HLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                +    L+ A         +  +       +  +   +G   +A  +  LA+++
Sbjct: 475 GYTWADRGENLELAREYIEEAVRLKPDDGAIRDSLGWVYYRLGKYQRAMEELELAVQL 532



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 83/253 (32%), Gaps = 20/253 (7%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  LL  Q      +   A   +  ++ I  T   A   L      + D + A     + 
Sbjct: 100 LAMLLLQQQ-----EREQAIYWVRRIIAIDPTDLAARSLLAKLYTALDDPDRAAAVYQEI 154

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L + P        +   Y  +     A   L Q   +   +     +     +    D G
Sbjct: 155 LTLDPGNANAMLMLAVIYGSSDRRQEAREILEQLVADQPAYF----LGHYYLARLYHDLG 210

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----I 295
            +  +      +L+L  ++ +A   AA    +      +  +L ++   NP  E     +
Sbjct: 211 LIEQALGAYERALELNWSAPLAQELAA-IYEAAGLYEDSLALLRRMVAKNPADERARSLL 269

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A++Y  L  E     L     L   +++     + +++I L+    ++A       +   
Sbjct: 270 ADLYLRL--ERVEEALAELTALRPYSRDVDRVDLTMARILLDEQRYEEAVVLLQGLLADE 327

Query: 356 PR---KEIFLLLA 365
           PR       L+LA
Sbjct: 328 PRLDAVRSLLVLA 340


>gi|262198610|ref|YP_003269819.1| hypotheticalprotein [Haliangium ochraceum DSM 14365]
 gi|262081957|gb|ACY17926.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365]
          Length = 2316

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 12/206 (5%)

Query: 162  FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +  R GDL+ A+    +A  +S     V  A+V  +     +++A   +    +     
Sbjct: 1716 RQHEREGDLDGAETLYREAATMSQGDLPVLVALVDFHCATHHFTQAAAAIEDFLRTEPPL 1775

Query: 222  NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +    ++    ++     D  A+       ++L  +   A    A+ L   N+  +A+ 
Sbjct: 1776 EQRLEAMMRQAEIQADCLLDPEAAIATLRAVVELSPDYQDAQYRLAQELFLLNRPVEAKA 1835

Query: 282  ILEKIWKVNPH------PEIANIYTHLLS------ENTVGKLKRALRLEEINKESVESLV 329
             +++  ++         PEI + Y + L         +   + +  R  E +      ++
Sbjct: 1836 AIDRAIELAASPGKPVLPEILSRYYYYLGRILEVLGESRRVVSQYRRAAEYDPAYAPPVL 1895

Query: 330  IVSKIALEMGSIDQAHAKAMLAMKIA 355
             +++ A+E     QA    + A   A
Sbjct: 1896 ALARRAVEQSDQRQAETLLINAAHAA 1921



 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 1/122 (0%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNR 223
             R+GD++ A     +A++   D      A+V      + WS       Q+ +    +   
Sbjct: 1061 RRLGDVDGAVAQYQRAIEYGGDIGRSQRALVHLLAEHERWSELEAAYVQELELLGGDEQT 1120

Query: 224  NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +IL+   +L     G    +     E+L+L   +I A    A    S   +R    +L
Sbjct: 1121 RASILMRLAALRRDQLGQASEAAQAYEEALELDPPNIPAMEALAALYESDGSERDLLRVL 1180

Query: 284  EK 285
              
Sbjct: 1181 SA 1182


>gi|262305021|gb|ACY45103.1| acetylglucosaminyl-transferase [Peripatus sp. 'Pep']
          Length = 288

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +  + H + L  L    I   +     A       L++      A 
Sbjct: 34  GXVAEAEECYNTALRLCSTHADSLNNL--ANIKREQGLTEEATRLYLKALEVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ ISP        +       ++   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMQDIPGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200



 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +          + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAFCNLANALKEKGXVAEAEECYNTALR----LCSTHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGLTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMQDIPGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++ +T   ++ +L       G    A R   KAL++ P+
Sbjct: 27  ANALKEKGXVAEAEECYNTALRLCSTHADSLNNLANIKREQGLTEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  + +  +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDIPGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYETRMKKLVAIVADQLEKNRLPSVHPHH 236


>gi|256829994|ref|YP_003158722.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579170|gb|ACU90306.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 884

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 14/233 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   ARKM   +  Q   +   L  L   Q+   E+      +    +  I  +  FA 
Sbjct: 175 GDRAEARKMLDKLLAQDPENRSGLHAL--AQLEAQEKDPEAMLDAYSRISSIYPSDLFAR 232

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y         G+    +  A   L   PD+      +        ++  A T+L++  + 
Sbjct: 233 YKQGSLLMNKGEGEKVRVSAEAMLSEYPDSAEGHRLMGLYLFREGKFDEAATYLSKSLRI 292

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +      + L+  +L+N +      +       L      + A I   +  + Q +  
Sbjct: 293 KPDLETYYLLGLVYYNLDNLE-----LAVTQFQTVLDYSPGFVQARIMQGEIFLRQGRGP 347

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           +A V  EK+ + +P     H  +      L+       L    +   +     
Sbjct: 348 EAMVAAEKLIEGSPEDFRGH--VLKGDALLMQGKAHEALAEFKQGIGLAPSHY 398



 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 82/235 (34%), Gaps = 14/235 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           +  +A    + A E    ++Q+   +  +   L        +   A++   K  ++ P  
Sbjct: 639 RAWMAAGDLDKAEESARRLMQLKPDKGQSCLPLASILEMRQNRAEAEKVLLKGWELEPSD 698

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             V   + +  +  +E  +A+   +Q   ++       A  L  + +     G    +  
Sbjct: 699 DQVGVVLGEFQLRGRETKKALATFDQVLAHSPT----NAPALTGKGMALQLLGRNDDAAR 754

Query: 248 DAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIW-KVNPHPEIANI--YTHLL 303
             +++++   + + A    A      + K  +A  +    +   N  P + +   Y  + 
Sbjct: 755 MYLQAVQARHDHVPALNNLAMIWADDEAKSAQAVNLAMAAFVLANSDPAVIDTLGYALIR 814

Query: 304 ---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               E  +G L RAL L   N   +     +++  L  G   +A A    A+  A
Sbjct: 815 NNRPEEALGVLARALTLAPGNPGILY-HQGLAQAEL--GRTAEARATLETALASA 866



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 89/274 (32%), Gaps = 37/274 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL  I    +  A +    V        +  V     +IA  + +  +A   +   LQ  
Sbjct: 66  GLAYIETGKMDQAEREFQKV--LLQNPYDGRVNFQLGRIANFQNKPAVAVPLIMAYLQEH 123

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+  L   +   GD  SA+ +  KAL + PD       +VQ +++  + + A   
Sbjct: 124 PDDAAALEQLAISATISGDPASAKGHLEKALAVEPDRISAKLGLVQIFMIQGDRAEARKM 183

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L++      E   NR+ L     LE  +K D  A          +  + + A       L
Sbjct: 184 LDKLLAQDPE---NRSGLHALAQLEAQEK-DPEAMLDAYSRISSIYPSDLFARYKQGSLL 239

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           +++ +  K   +                               A  +     +S E   +
Sbjct: 240 MNKGEGEK-VRV------------------------------SAEAMLSEYPDSAEGHRL 268

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +       G  D+A      +++I P  E + LL
Sbjct: 269 MGLYLFREGKFDEAATYLSKSLRIKPDLETYYLL 302



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 98/290 (33%), Gaps = 23/290 (7%)

Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           V  L    A+ E   + + A  +LE       T    + S + +  R G  + A     +
Sbjct: 533 VRALIASAAVLEKQGKLDEARVRLEKARSTKDTGAILMLSSFLQ--RNGKSDEALAVLDQ 590

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIARSLEN 236
                P+   + + + + +V  KE  +A+     L Q    A    R RA +        
Sbjct: 591 ERTKQPENMVIVQGMAKLHVARKEMDKAMALYSRLEQIDPYAGTVERMRAWMAA------ 644

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              GD+  +   A   ++L  +   + +  A  L  +  + +AE +L K W++ P  +  
Sbjct: 645 ---GDLDKAEESARRLMQLKPDKGQSCLPLASILEMRQNRAEAEKVLLKGWELEPSDDQV 701

Query: 297 NIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM--GSIDQAHAKAMLA 351
            +      L    T   L    ++   +  +    +    +AL++   + D A       
Sbjct: 702 GVVLGEFQLRGRETKKALATFDQVLAHSPTNA-PALTGKGMALQLLGRNDDAARMYLQAV 760

Query: 352 MKIAPRKEIFLLLAQI-EQANSHNTDKILYWTQSALHAMPDPLWISDDGY 400
                       LA I     + +   +     + + A  DP  I   GY
Sbjct: 761 QARHDHVPALNNLAMIWADDEAKSAQAVNLAMAAFVLANSDPAVIDTLGY 810


>gi|195469982|ref|XP_002099914.1| GE16759 [Drosophila yakuba]
 gi|194187438|gb|EDX01022.1| GE16759 [Drosophila yakuba]
          Length = 610

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 82/275 (29%), Gaps = 25/275 (9%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR------EFAVYSLYFESCRIGDLNSAQ 174
           L   ++    + + ++  A    + +      R            LY+     G+   A+
Sbjct: 204 LSTWIKALAQMFDCKHLDAARTFQRLQDTTMLRCNEYLMMAMGRCLYYH----GNYIQAE 259

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           +    A+  +PD       +         + S  +  L  +  +  +++ +   +    +
Sbjct: 260 QLFASAISANPDNVEAIAMLAVVRSQEGVDGSMDMDRLYAQVTSEVKYSASHWFVH---A 316

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
               D G          + L L      A I   + LIS  + ++A         V P+ 
Sbjct: 317 QLMYDSGKFERGLSFVGQCLNLEPRHHEALILRGRLLISLERHKEAAEAFRTAQTVIPYR 376

Query: 294 EIANIYTHL-LSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS---IDQAH 345
               +Y  L  S     + K A  +        K S  SL +  +             A 
Sbjct: 377 --FEVYRGLFHSYLAQKRFKEAHTMCNWTLHIFKNSPRSLTMFGRTLFHSPDPKIRKTAR 434

Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKIL 379
             A  ++KI P       L+A I Q        I 
Sbjct: 435 KFAEKSLKIDPNYTPAVALMADICQVEGAPKASIK 469



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +   L     R  +   A      A  + P    V   +   Y+  K +  A T  N   
Sbjct: 348 LRGRLLISLERHKEAAEA---FRTAQTVIPYRFEVYRGLFHSYLAQKRFKEAHTMCNWTL 404

Query: 216 KNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                 N  R++ +  R+L  + D      +   A +SLK+  N   A    A     + 
Sbjct: 405 H--IFKNSPRSLTMFGRTLFHSPDPKIRKTARKFAEKSLKIDPNYTPAVALMADICQVEG 462

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHL 302
             + +  +LE    + P    AN++THL
Sbjct: 463 APKASIKLLEDHVSLFPQ---ANLFTHL 487


>gi|187925716|ref|YP_001897358.1| hypothetical protein Bphyt_3746 [Burkholderia phytofirmans PsJN]
 gi|187716910|gb|ACD18134.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN]
          Length = 602

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 70/224 (31%), Gaps = 13/224 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL++ A  ++  A  M  Y        +    +        A+   + A E+  + L  
Sbjct: 94  RGLVAAALGHLDEA--MICYDQALQLQPDFADAHNNFGVALQAQGDLSEAIEQYRLALAS 151

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A  +L     ++G  + A     +AL + P +      V   +    +   AI 
Sbjct: 152 NPMLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNAHKARGDHGAAIA 211

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +       +    A + +   +     GD   +      ++ L  N     +C   S
Sbjct: 212 SFERALSLRANYT--EAHINLGSLIGKL--GDYAGAEAHYRRAVALKPN-PTHLVCLGGS 266

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           L +Q +  + E    +   ++PH      Y           LKR
Sbjct: 267 LGAQGRLDEEEGFYRQALALDPH------YADAHQNLAWLLLKR 304



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 15/201 (7%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E+ + G L++A+    + L + P                 +   A + +++  K     
Sbjct: 28  LEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHDTAASLMSRALK----L 83

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R+ A     R L  A  G +  +     ++L+L  +   A      +L +Q    +A  
Sbjct: 84  DRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVALQAQGDLSEAIE 143

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVESLVIVSKI 334
                   NP      +   L     + KL      L        ++  S E+   V   
Sbjct: 144 QYRLALASNP----MLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNA 199

Query: 335 ALEMGSIDQAHAKAMLAMKIA 355
               G    A A    A+ + 
Sbjct: 200 HKARGDHGAAIASFERALSLR 220



 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 56/193 (29%), Gaps = 11/193 (5%)

Query: 124 LLEVQ-----IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           LL+ +            ++ A       L +  T   A +++       GD  +A     
Sbjct: 155 LLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNAHKARGDHGAAIASFE 214

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +AL +  +       +        +++ A     +             +     +    D
Sbjct: 215 RALSLRANYTEAHINLGSLIGKLGDYAGAEAHYRRAVALKPNPTHLVCLGGSLGAQGRLD 274

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN- 297
           + +         ++L L  +   A    A  L+ +   R+        W+ + +  IA  
Sbjct: 275 EEEGF-----YRQALALDPHYADAHQNLAWLLLKRGDYRQGWAEFALRWRKSDYDAIAVP 329

Query: 298 IYTHLLSENTVGK 310
                  E+  G+
Sbjct: 330 GVAEWRGESLEGR 342


>gi|326386122|ref|ZP_08207746.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326209347|gb|EGD60140.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 657

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 87/292 (29%), Gaps = 41/292 (14%)

Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           + + + A   +E  + + P    F       E  R G    A  Y  KA    P  P + 
Sbjct: 13  QGRLDEAARLVEGAIARNPEDPAFLALGGAIEFHR-GAHQRAVSYLKKAQVFRPQDPVIR 71

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE---------------- 235
             +V+  +   +   A    +++        R  A L    + E                
Sbjct: 72  ANLVEALLQMGDLHGAHALCDRESALGDPSLRL-ARLGAYLAQEVGEFATAVELYRHVTS 130

Query: 236 ---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                            D G    +     +++++  ++    I   ++L+   +  +A 
Sbjct: 131 KVPADWASWNNLGNALTDMGKPGEAVAALEQAVRVAPDAPPIRINLGETLLLVGRVEEAV 190

Query: 281 VILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            +L +    +  +PHP +A    +L S                  +  +       +A +
Sbjct: 191 DVLSRASTDFPEDPHPLLALFRHYLESGEEDRAFAVLQEASRRAPDRADIQTDFGHVAGQ 250

Query: 338 MGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
                +A      A+ ++P        L A +E+ N     ++    + A  
Sbjct: 251 RNEFARAEEALERALAVSPGFTPAFVGLAAVLERVNR--EGELEGLRERASR 300


>gi|262304943|gb|ACY45064.1| acetylglucosaminyl-transferase [Armillifer armillatus]
          Length = 289

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEDCYNTALR----LCSTHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFTEDATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMGDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           ++ P 
Sbjct: 184 RLKPD 188



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 64/216 (29%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q + A +     L++ +T   ++ +L       G    A R   KAL++ P+
Sbjct: 27  ANALKEKGQVSEAEDCYNTALRLCSTHADSLNNLANIKREQGFTEDATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           + GD+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMGDVQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        ++   P+  + Y +L    
Sbjct: 143 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALRLK--PDFPDAYCNLSHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +  G++K+            RL  ++   
Sbjct: 201 QMICDWSDYEGRMKKLVNIVAEQLGKNRLPSVHPHH 236


>gi|255010354|ref|ZP_05282480.1| putative N-acetylglucosamine transferase [Bacteroides fragilis
           3_1_12]
          Length = 462

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 22/207 (10%)

Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             A  +  K +D +P  P  WV  A  +     K++ +A+   +      +E+    A +
Sbjct: 172 EKATFFYNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAVESCDFAIAADEEFG--EAHI 227

Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLIS-----QNKKRKAEVI 282
           + A SL + +  +  IA Y  A+E   L        I  A +            R A   
Sbjct: 228 IKAHSLFHLENIEGAIAEYQKALEYKTLSPEFTYMFIGLAYAHQENWAEAAESYRLALQA 287

Query: 283 LEKIWKVNPHPEIANIYT-------HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           +E+       P +++IY+       HL       +L R ++  E+  +  E  ++  +I 
Sbjct: 288 IEES-GNGSSPLLSDIYSNKAVCASHLGDSAEAHRLCRLVK--ELAPQDAEPYLLEGRIY 344

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +E G+ DQA A+  LA++ AP  + ++
Sbjct: 345 MEEGNFDQARAEWALALRYAPEADTWM 371


>gi|309389278|gb|ADO77158.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium
           praevalens DSM 2228]
          Length = 403

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 91/281 (32%), Gaps = 51/281 (18%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A K++  + +     ++YL      +I    +++  A    E  L++  +      +L
Sbjct: 164 KKAEKLYKEIIEVKAQASDYLAL---AKIKEQNKKFKKAINYYENALKLNDSESSLYLNL 220

Query: 161 YFESCRIGDLNSAQRYATKALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                +  +  +A     K ++      P    + E+  +       ++ A     +  K
Sbjct: 221 AKLYQKTNNNKAAILTFKKGINQKADFTPYYIGLAESYFELQ----NYNEA----EKYLK 272

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A E N N        +    ++G +  +  +  ++LK   N + A +   K  + +   
Sbjct: 273 KAIELNNNSYYGYFLLAEVEVEQGRLNLALSNYNQALKYNPNYVEAYLAEGKIYLKEKDY 332

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +A                               +       E NK+   S   ++K   
Sbjct: 333 YRA-------------------------------ISSFSIAVEKNKDHAASRYYLAKAYY 361

Query: 337 EMGSIDQAHAKAMLAMKIA---PRKEIFLLLAQIEQANSHN 374
           +   ++ A A+   A+ +    P+   F  L QIE   + +
Sbjct: 362 QAEMLEAARAEIKKALHLDNNYPKAREF--LEQIEADLNLD 400


>gi|225444762|ref|XP_002279485.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1064

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 7/165 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +   ++  Y  A       ++    P       Y L     ++GD  S+     K L++
Sbjct: 285 ARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEV 344

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+     +A+   YV   +  +A  +L +  K   +    +A L +   L  +D G  +
Sbjct: 345 YPENCEALKALGHIYVQLGQTEKAQEYLRKATK--IDPRDAQAFLDLGELLITSDTGAAL 402

Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286
            ++  A   LK     +   +          + +   AE   ++ 
Sbjct: 403 DAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEA 447


>gi|113475906|ref|YP_721967.1| hypothetical protein Tery_2266 [Trichodesmium erythraeum IMS101]
 gi|110166954|gb|ABG51494.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1213

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 90/311 (28%), Gaps = 36/311 (11%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVS-------QQHTFHNEYLVYLLEVQIALAERQY 136
            Y AL   L      +  LA K  S                   L+ L          ++
Sbjct: 363 RYAALTQSL-----GDWELALKRWSEAVFKFPENIDFQVQKGNALINL---------SRF 408

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A    + + +    R          +  +GD   A +  ++A+   P+          
Sbjct: 409 DEAEAVFQQLKEKYPNRPHGYERYAALTQSLGDWELALKRWSEAVFKFPENIDFQVQKAN 468

Query: 197 QYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +    +  A     Q   K  N  +     A L           GD   +      ++
Sbjct: 469 ALINLSRFDEAEAVFQQLIEKYPNQPDGYERCAAL-------TQSLGDWELALERWENAI 521

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI--ANIYTHLLSENTVG 309
                     +     L +  +  +AE+  EK+  + P  H  +  +     LL      
Sbjct: 522 AKFPGHFNFYLQKGDVLANLFRYEEAEIWWEKVIALYPARHEGLYKSAALARLLGNREFA 581

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
             +R  +  E     + +    +K  + MG   +A  K + A++  P     LL   I  
Sbjct: 582 -WQRFEQAIEKFPGHIPAYCEAAKELIAMGRFAEAEEKFLQALQRNPNDLTTLLQGGILA 640

Query: 370 ANSHNTDKILY 380
           +   N +  L 
Sbjct: 641 SQQGNRELALE 651



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 4/133 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G L  AQ+   K +++ P+  W    + Q +    +W  A+T   +  K        
Sbjct: 14  LQAGKLEDAQKEYQKLIELQPNFAWNYYYLGQLFFQQGKWQDAVTQYRKAIKLNPNS--- 70

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L  + +    ++G +  + + + +++ L  +  + +   A +  ++    +A    +
Sbjct: 71  -ATLHNSLAEALIEQGKLDEAINYSQKAIFLEPDLAIYNQTLALAYEAKLDLWQAFKTWQ 129

Query: 285 KIWKVNPHPEIAN 297
           KI  ++P+  +A 
Sbjct: 130 KILSLHPNHSLAT 142



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 21/232 (9%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTE 192
           + A    + + +    +     +      R+GD   A +  ++A+   P           
Sbjct: 273 DEAKAVFQHLKEKYPNQPQGYENYARLIHRLGDGELALKLWSEAIIKFPKPIVFQVQKGN 332

Query: 193 AVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           A++        +  A     Q K+K     +       + +SL     GD   +     E
Sbjct: 333 ALINL----SRFDEAEAVFQQLKEKYPNRPHGYERYAALTQSL-----GDWELALKRWSE 383

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLS--EN 306
           ++     +I   +    +LI+ ++  +AE +   L++ +   PH      Y  L     +
Sbjct: 384 AVFKFPENIDFQVQKGNALINLSRFDEAEAVFQQLKEKYPNRPHG--YERYAALTQSLGD 441

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
               LKR         E+++  V  +   + +   D+A A     ++  P +
Sbjct: 442 WELALKRWSEAVFKFPENIDFQVQKANALINLSRFDEAEAVFQQLIEKYPNQ 493


>gi|218263597|ref|ZP_03477671.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222607|gb|EEC95257.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii
           DSM 18315]
          Length = 667

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 53/153 (34%), Gaps = 12/153 (7%)

Query: 213 QKKKNAKEWNR--NRAILLIARSLENA---DKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +K +      R   +        + N       D+ A+     ++LKL    + A +   
Sbjct: 512 KKLREEIHAQREIQKEYAHEYYLMGNECITKAHDLNAAIRSFDKALKLYPEFVDAWVRKG 571

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINK 322
            +L+      +A   L +  ++NP    A       Y  L   +    +   ++  ++  
Sbjct: 572 VTLLDLGDGFQAVTCLNEAVRLNPKSFKARYNRGKSYLQLKYYDEA--VSDFMKAVDLKP 629

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +   +   +++  L +G  + A     +A ++ 
Sbjct: 630 KHAAAHEYLAEAFLHIGEEELARQHQDIADELR 662


>gi|218248948|ref|YP_002374319.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|218169426|gb|ACK68163.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 363

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 84/265 (31%), Gaps = 11/265 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +     N   A K +         +N    Y L   +A      N A      +   P
Sbjct: 83  GYLYAQKGNFRQAVKAYQQAVTLD-PNNADFYYALGFSLANIGDNENAASAYYYAIQLAP 141

Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T+      L     R  D   A     + + + P+       +    +  KE  +AI 
Sbjct: 142 RVTK--NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQ 199

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +LN   K        R +L  A      ++ +   +++    + ++   +    +   + 
Sbjct: 200 YLNNAVKRFPNDLELRLLLATA----FLEQDNNELAFNQLKSAERISPGNPKVQLKIGRI 255

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVE 326
           L  QNK   A    ++I  ++P    A        L +++ +G +     L  +  E+ E
Sbjct: 256 LEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLATKDYLGAVITYRELASMLPETPE 315

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
               +     E G   +A      A
Sbjct: 316 PYYYLGLAYKERGRKKEATKALEQA 340



 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 78/249 (31%), Gaps = 42/249 (16%)

Query: 112 QQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE--MMLQIPATREFAVYS-LYFESCRI 167
            Q +  +E L  LL   +  +  + YN A    E   +L     + F+    LY +    
Sbjct: 33  AQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKAAILDGNNAKIFSGIGYLYAQK--- 89

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+   A +   +A+ + P+      A+        +   A +      + A    +    
Sbjct: 90  GNFRQAVKAYQQAVTLDPNNADFYYALGFSLANIGDNENAASAYYYAIQLAPRVTK---- 145

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
             I   +    + D   +       + L  N+  A      SLI Q +  KA   L    
Sbjct: 146 NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNA- 204

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                                  +KR           +E  ++++   LE  + + A  +
Sbjct: 205 -----------------------VKRF-------PNDLELRLLLATAFLEQDNNELAFNQ 234

Query: 348 AMLAMKIAP 356
              A +I+P
Sbjct: 235 LKSAERISP 243


>gi|172057801|ref|YP_001814261.1| TPR repeat-containing protein [Exiguobacterium sibiricum 255-15]
 gi|171990322|gb|ACB61244.1| Tetratricopeptide TPR_2 repeat protein [Exiguobacterium sibiricum
           255-15]
          Length = 420

 Score = 46.1 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 67/220 (30%), Gaps = 22/220 (10%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ-RYAT 178
               +L   +  ++    +A  KL+   ++        Y L      +G  + A   +A 
Sbjct: 103 PRTLVLLADLYQSQGLDEVALAKLKEARELAPNEPLLAYGLAELYMTLGAFDQAVPLFAE 162

Query: 179 KALDISPDAPWVTEAVV-QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            A D         +A+  +   +  E+  AI    +         R+    L   ++   
Sbjct: 163 IAADPVLREELPLDALYAEALAMIGEFEEAIPLYERA-----VAERSDLHTLFGLAMTAH 217

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             G    +     + +    +   A +  A+S       ++A  ++++            
Sbjct: 218 RVGQHQKAVETFQQLIAQDPDYTSAYVPYAESQAELGLTKEALNVIKQ------------ 265

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
               +  ++   +L+    L  +     E  V   + AL 
Sbjct: 266 ---GIERDDYNDELRTMEALFLLKLGDREGSVKALREALA 302


>gi|300312874|ref|YP_003776966.1| TPR repeat-containing protein [Herbaspirillum seropedicae SmR1]
 gi|300075659|gb|ADJ65058.1| TPR repeat-containing protein [Herbaspirillum seropedicae SmR1]
          Length = 603

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 11/197 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G L  A+    K L   P             +  ++W  A   L +  +   +     
Sbjct: 20  QKGQLAPAEELYKKVLVKLPRHFEANYLYGMLKLHQEDWETAEAQLAKAIELNPD--HLD 77

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                A +L +  + D   + +D +  L +  + + A +    +L    + R+A   LE+
Sbjct: 78  TYFDHAGALAHLGRDDEAVARYDLV--LTVNADFVEALLARGAALRRLGRNREALADLER 135

Query: 286 IWKVNPHPEIANIY---THLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              +   P+ A+ +    ++L ++       +   R   +  + +E+   +     +   
Sbjct: 136 ATALA--PDNADAWFQRGNVLHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQ 193

Query: 341 IDQAHAKAMLAMKIAPR 357
           +DQA      A+++ P 
Sbjct: 194 LDQALRAYDRALEVQPD 210


>gi|289547832|ref|YP_003472820.1| hypothetical protein Thal_0055 [Thermocrinis albus DSM 14484]
 gi|289181449|gb|ADC88693.1| TPR repeat-containing protein [Thermocrinis albus DSM 14484]
          Length = 159

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 49/162 (30%), Gaps = 5/162 (3%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNS 172
                E      +            A E  +  ++   T     Y+    +   +GD   
Sbjct: 2   KDLEREAEELFRKAYQLHMMGDIKRAIEFYQRSIEKKPTAIA--YTFMGWAYSMLGDYEK 59

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     KA+++ P+       +    +    +  AI +L +         R+   + +  
Sbjct: 60  AIELCLKAIELDPELGNPYNDIGSYLIALGRYDEAIPWLKRAIVAKNYEPRHFPHINL-- 117

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +     KG    +  +   +LK+  N   A I   + L   N
Sbjct: 118 AKVYLAKGMYKDALVELENALKIEPNFKPAHILKHQILAMLN 159


>gi|158424550|ref|YP_001525842.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
 gi|158331439|dbj|BAF88924.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
          Length = 679

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 89/270 (32%), Gaps = 15/270 (5%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           +    L +        + + A E      ++      A   L F   ++G    A R A 
Sbjct: 24  DPRALLGQASALHRAGRMDEAIEACRAAAKVAPGFLDAHRMLAFALLQVGRAKEAVRAAQ 83

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           KA D++P  P     V    +   + ++A+   ++  K A   N   A      +L    
Sbjct: 84  KARDLAPRDPNSHLLVGAGLLGQGDAAKALAAFDEAAKLAP--NLLEAHFQAGNALAAL- 140

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPE 294
            G   A+      +L L   S+ A    A +     +  +A    E++ ++ P    H  
Sbjct: 141 -GRFPAAIERYNRALALDPRSVEALTNRATTYARLARHAEALADCERLIEMQPWSPLH-L 198

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV--SKIAL--EMGSIDQAHAKAML 350
           +A   T L     V  L  A           E+  +   +K AL    G+ID       L
Sbjct: 199 VAKASTLLEMGEPVPALAAAEAAMAAAPTFAEAFHVAGQAKAALMDISGAIDLMTQALAL 258

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
             +  P   +   LA++ +      +    
Sbjct: 259 EPQPRPTVRVH--LARLLRMEERFAEARRQ 286



 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 7/159 (4%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A     ++         +    L+ ++      G M  +      + K+    + A  
Sbjct: 4   NGAPVTAARQLSRVWSSMSSDPRALLGQASALHRAGRMDEAIEACRAAAKVAPGFLDAHR 63

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319
             A +L+   + ++A    +K   + P     H  +      L   +    L       +
Sbjct: 64  MLAFALLQVGRAKEAVRAAQKARDLAPRDPNSH--LLVGAGLLGQGDAAKALAAFDEAAK 121

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +    +E+          +G    A  +   A+ + PR 
Sbjct: 122 LAPNLLEAHFQAGNALAALGRFPAAIERYNRALALDPRS 160


>gi|34498498|ref|NP_902713.1| tetratricopeptide repeat protein [Chromobacterium violaceum ATCC
           12472]
 gi|34104353|gb|AAQ60712.1| probable periplasmic protein [Chromobacterium violaceum ATCC 12472]
          Length = 385

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 51/160 (31%), Gaps = 9/160 (5%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + ML         R+     L  +  + G ++ A+    K L+ +     
Sbjct: 84  GENDRAIRLHQQMLDSSDLPGEQRDLVRNELAQDFRKAGLVDRAEEILLKLLNGNMALA- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++  Y   ++W +AI    + + +A  +    A      +     K D   +    
Sbjct: 143 ARRQLLDIYQQDRDWKKAIETARELRSDAHSFQHEVAQFYCELAQGELYKSDHSQARQYV 202

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            E+L      + AS+       ++     A       W+ 
Sbjct: 203 AEALAANRKCVRASLILGDIEFAEGNLEAA----IAAWQS 238


>gi|318040539|ref|ZP_07972495.1| TPR repeat-containing protein [Synechococcus sp. CB0101]
          Length = 590

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 85/277 (30%), Gaps = 33/277 (11%)

Query: 94  SIAAHNIPLARKMHSYVSQQHT------------------FHNEYLVYLLEVQIALAERQ 135
           ++A  +   A   +    +  +                   + E  + L   Q AL   +
Sbjct: 38  AVAQGDATAAAYSNLAALELQSNRIEAAAALLEHALRLAPNNAEAWLNLGTAQHAL--GR 95

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
              A E       +  T   A  +L      I DL  A +  ++AL + P  P V  A  
Sbjct: 96  SAKAVESFRQAASLKPTMAKAYANLGHALQAIHDLPGALQAYSQALSLQPLYPEVLSARG 155

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                    + +I  L Q       +       L    L   + G +  + +   ++L L
Sbjct: 156 VALRKQGHINESIASLQQAINQRSPYPE----ALNNLGLSLQEAGQLEEALNCFEQALAL 211

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310
                        +L+ Q +  +A+   ++    NP     H  +A    H   +    +
Sbjct: 212 TPEHPEILSNLGLALMEQGRIDQAKTCFQQALNYNPLYPEAHRHLAY-CVHGRDDAEPEQ 270

Query: 311 LKRA--LRLEEINKESVESLVIVSKIALEMGSIDQAH 345
             RA    L++ + ++      + K  L+      A 
Sbjct: 271 AARACLEELQD-HPKAYHLSFCIGKYQLDRLDPGAAE 306



 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 29/220 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDIS------------------PDAPWVTEAVVQQYVLA 201
           LY ++   GD  +A      AL++                   P+       +       
Sbjct: 34  LYQQAVAQGDATAAAYSNLAALELQSNRIEAAAALLEHALRLAPNNAEAWLNLGTAQHAL 93

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              ++A+    Q           +A   +  +L+     D+  +     ++L L      
Sbjct: 94  GRSAKAVESFRQAASLKPTM--AKAYANLGHALQAI--HDLPGALQAYSQALSLQP-LYP 148

Query: 262 ASICAAK--SLISQNKKRKAEVILEKIW-KVNPHPE-IANIYTHL-LSENTVGKLKRALR 316
             + +A+  +L  Q    ++   L++   + +P+PE + N+   L  +      L    +
Sbjct: 149 -EVLSARGVALRKQGHINESIASLQQAINQRSPYPEALNNLGLSLQEAGQLEEALNCFEQ 207

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +  E  E L  +    +E G IDQA      A+   P
Sbjct: 208 ALALTPEHPEILSNLGLALMEQGRIDQAKTCFQQALNYNP 247


>gi|307183815|gb|EFN70463.1| Anaphase-promoting complex subunit 7 [Camponotus floridanus]
          Length = 572

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
              I +A     Y +++ +  N      L  Q          A                 
Sbjct: 300 TGEIYVAMAYSLYAARKFSRANT-----LTAQALNLNPNDIEATI--------------- 339

Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +   ++ E  +  D   A  +   A+ + P      + +V   V       A+   +   
Sbjct: 340 LRGNIFIEQKKYQD---ALFFFRHAVQLKPYRYEPHKGLVDCLVGMHRLREALNIASSSC 396

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K      R   +L +  S+   D   +  + +   ++L   +  + A    A+    +  
Sbjct: 397 KQLGHTAR---VLTLYASVLMKDPVSVSKAKNLLEKALSQDEVYLPAVYLLAEIYEQEMN 453

Query: 276 KRKAEVILEKIWKVNP----HPEIANIYTHLLSEN 306
              A  +LE+  + N     H  + +++  + +E 
Sbjct: 454 LEAAIELLERQVENNSTCKLHQTLGDLWARVHNEE 488


>gi|296158011|ref|ZP_06840844.1| cellulose synthase operon C domain protein [Burkholderia sp. Ch1-1]
 gi|295891779|gb|EFG71564.1| cellulose synthase operon C domain protein [Burkholderia sp. Ch1-1]
          Length = 1587

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 59/207 (28%), Gaps = 17/207 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL  A       L   PD P +  A+ + Y  A +   A+T      +   +    
Sbjct: 711 RQRGDLAGAYDVIAPWLAAMPDNPDLQAALGRLYSTAGDDRNAVTSYRVALQRKPDDLNL 770

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               + A +           +   A ++L              +   ++ K   A   L+
Sbjct: 771 LQATISAAAGAKQFS----YAESLATQALNAAPGDPGVLATVGRMYRAEGKLSLASTYLQ 826

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSK------ 333
           +       P +AN        + V +     ++R            E             
Sbjct: 827 RSLVAANTPLMANA--PRNPASNVPRGWEVAMRRIGATPLPGTNPFEGKTATVTPTDADN 884

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEI 360
            AL  GS + A A    +    P + +
Sbjct: 885 AALAGGSYNAARASLPYSQSSLPTQTV 911



 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 88/274 (32%), Gaps = 35/274 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G M +A  +   A + +    ++   + + +  L+    A        A +    +    
Sbjct: 407 GEMLLANGDPVGAEQAYRMALRRQADNPDAVRGLVGALAAQGRGD--EALQFANQLNAEQ 464

Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            ++      +      +        GDL SA+     AL  +PD PW+   + + YV   
Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             + A + ++       +        L A +L +A+  D                + I  
Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQL--------DRIPV 572

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           +           ++  A   L+    V+   ++A       +  T   L      E +  
Sbjct: 573 A-----------QRTDAMTTLQHRLWVHQQADLAT--RMARTGQTQQALATLHAAEPVAG 619

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            S E + +++    + G  ++A      AM  AP
Sbjct: 620 NSPELIGVIAAAYQQAGDPNRALGLVRAAMNAAP 653



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/199 (10%), Positives = 54/199 (27%), Gaps = 19/199 (9%)

Query: 97  AHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-- 153
           A +  + A    S+               L                + + M+Q  +T   
Sbjct: 218 AGDSTVGASAKKSWRQALLWLDARPSDAALYQAYLQTATDDAAVKARFDSMVQQDSTART 277

Query: 154 ------EFAVYSLYFE----SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
                               +    D+ +A+   +  L  SP+       +    +  + 
Sbjct: 278 RAQENAAVDARGRTIADGFAALDRNDVATARAKFSSVLATSPNDADALGGMGIAALKQER 337

Query: 204 WSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDMIASYHDAIESLKLCD 257
           ++ A   L +  +N        A+         + ++     G+   +      ++ L  
Sbjct: 338 FAEARNDLERASRNGNPARWKTALDSATYWTYTSDAIGARSNGEFAKAKSLFERAIALNP 397

Query: 258 NSIMASICAAKSLISQNKK 276
           + + A +   + L++    
Sbjct: 398 SDVTAQVLLGEMLLANGDP 416


>gi|237708531|ref|ZP_04539012.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229457460|gb|EEO63181.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 316

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 49/268 (18%)

Query: 99  NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +   A++M         F      ++E     L         + + A   L+ M      
Sbjct: 32  DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91

Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +     ++  + Y +     D  + +    KAL +    P       +  +  K+   AI
Sbjct: 92  QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +     +++     +    R+           +  D  + L L  +   A +   +
Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            L + N+                 PE A                   ++  +N  + ++ 
Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++  ++ L     D+A A    A++I P
Sbjct: 233 ILSGELYLANKDFDKALAIYDEAIEINP 260


>gi|332024785|gb|EGI64973.1| RNA polymerase-associated protein CTR9-like protein [Acromyrmex
           echinatior]
          Length = 1225

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 87/267 (32%), Gaps = 13/267 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +   +    V L      +       A    E  L
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224

Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           Q+      A+  L          +   +  +  +KA  I    P V   +   +   K++
Sbjct: 225 QLDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263
           ++ +  L     +  E    RA      +     +GD   ++    ++ +      ++  
Sbjct: 285 NK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317
               +  + +     A    EK+ K  P        + ++Y +  S++     K    ++
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344
            E   + VE+ + +++I LE   ++ A
Sbjct: 404 TEQFPDDVEAWIELAQI-LEQSDLNAA 429


>gi|326437136|gb|EGD82706.1| hypothetical protein PTSG_12001 [Salpingoeca sp. ATCC 50818]
          Length = 938

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 98/307 (31%), Gaps = 52/307 (16%)

Query: 101 PLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEM--------MLQIPA 151
             A ++    S+    H N    Y    +   A   Y+ A    +         + +  +
Sbjct: 427 EEAVRISCAASKDGDKHPNTGATYNNLGRTYDALGDYDKALASYQRAVEVFCDTLGEDHS 486

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKE 203
           T   A  ++       GD + A  Y  KA+ I         P    +  ++   ++    
Sbjct: 487 TTGLAYGNIGTVHDSKGDYDRAVEYFEKAIAIVVAALGDEHPSVANLYNSMASAFMGQGR 546

Query: 204 WSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           + +A+    +  +         +         +    R+L   D+   +     AI  ++
Sbjct: 547 YDQALQMYEKDLQITQASLGEWHMGTAASYGGLGSAYRALGEYDRAIEMYEKDLAI-GVR 605

Query: 255 LC----DNSIMASICAAKSLISQNKKRKAE-------VILEKIWKVNPHPEIA------- 296
           +      +          +  ++ +  +A         I    +    HP++A       
Sbjct: 606 VMGEKHPDVATTYSNLGAAYSNKGEHDRAIEHFIKCLEITIAAFGNE-HPDVATCLNNLG 664

Query: 297 NIYTHL-LSENTVGKLKRALRL--EEINKESVESLVIV---SKIALEMGSIDQAHAKAML 350
           + YT +  +++ V  L RA+ +    +     E+ V V    +     G  DQA     L
Sbjct: 665 SAYTSIGAADDAVEFLHRAVEIRSAVLGNMHPETAVAVSNLGRALRATGDDDQALECFEL 724

Query: 351 AMKIAPR 357
           A++I  R
Sbjct: 725 ALEINRR 731


>gi|34192824|gb|AAH32839.2| Interferon-induced protein with tetratricopeptide repeats 2 [Homo
           sapiens]
          Length = 484

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     H +I   Y          + K    +  + +  +     + ++      I
Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
             A A    A +       +  +LA +       E+A 
Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354


>gi|302849597|ref|XP_002956328.1| hypothetical protein VOLCADRAFT_97285 [Volvox carteri f.
           nagariensis]
 gi|300258440|gb|EFJ42677.1| hypothetical protein VOLCADRAFT_97285 [Volvox carteri f.
           nagariensis]
          Length = 575

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 88/299 (29%), Gaps = 39/299 (13%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTE 192
            Y+ A       L+        +++        GDL++A      A   +PD    + + 
Sbjct: 59  DYDAASYAFRTALEREPGNAVVLHAWATVEASRGDLSAAGSRFRAATQANPDMVHSYTSW 118

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A +      +          +  +     +     LL A +    ++     +     ++
Sbjct: 119 ARMAAAAGDE------AAATRLFQEGYAADPMHVPLLHAWATFELNRDKQSTARKLLTQA 172

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNP-HPEI-ANIYTHLLSENTVG 309
           L+L    + + +        Q    KA  + E+    V P  P I A     L S NT  
Sbjct: 173 LQLDPYHVPSWMAIGSLEWRQGNPAKAREVFERGLSMVGPSAPLISALAELELRSSNTKN 232

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA----------KAMLAMKIAPRKE 359
             +   RL       + +L+  +K+    G+  +A              +L +       
Sbjct: 233 ARELFARLRITAPSHIPALLSEAKMEHRAGNRTRAQQLYGEAAAALAAGVLHLAEGDVAL 292

Query: 360 IFLLLAQIEQANSHNT----------------DKILYWTQSAL--HAMPDPLWISDDGY 400
              LLA +E    +N                      W +  L      D   +  +G+
Sbjct: 293 AEELLAAVEAVEPNNGHMCYTRGLLCQREGALAAAEQWFRRGLVCRTSRDGALLCYEGF 351


>gi|254442510|ref|ZP_05055986.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256818|gb|EDY81126.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 592

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 23/262 (8%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
              +    N   V + + +  L+ ++   A    E     P   E A   L   +   G 
Sbjct: 285 SRAEQIAPNNANVLVEKGRTLLSSQKPKDALRAFEKATAQPNPHEAAYIGLAQATASTGK 344

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRA 226
              A      A    P +  +  A+   Y+  ++   A+    +         + NRN  
Sbjct: 345 PKQAIELLVAAETQYPKSAELLSALGTLYLSQQKLDSALDAFKRAHSLNPRNPQANRNLG 404

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            LL+AR       GD     +     ++  D+S +A   A   L  Q   + A  +L++ 
Sbjct: 405 TLLLAR-------GDKSGLAYTENYLVRQPDDSEVALFTARNLLEKQGNPQAAAALLQRS 457

Query: 287 WKVNPHPE------IANIYTHLLS-ENTVGKLKRA-----LRLEEINKESVESLVIVSKI 334
           +     P       +A+ Y  L + + +  +L  A       L     ++ E+L  +  I
Sbjct: 458 YDSLARPSNELRQLLASSYHQLSNLQASQKRLAPAIASLEQSLTIW-PDNYEALANLGMI 516

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
             ++G+ ++A +  +   +  P
Sbjct: 517 NAQLGNHEKAESYLLQFTEAQP 538


>gi|182677748|ref|YP_001831894.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633631|gb|ACB94405.1| Tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 662

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 158 YS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L  +  R+ +  +A      AL + PD         Q    +  +  A+ F ++   
Sbjct: 141 RGVLLRDLGRLDEAIAALDI---ALMLQPDHAEALHTGGQILQASGHFEDALAFYDKALS 197

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
               +    A++     L+   + D  A+      +  L  ++         +L    + 
Sbjct: 198 LKPRF--IEALIDRGALLQTVKQFD--AALTCYNAAHALQPDNAELLNNRGTALQCFGRF 253

Query: 277 RKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIV 331
            +A   LE+   +   P  A  +      H+ S      L    R  E+     E++   
Sbjct: 254 SEALTDLERAIALR--PNFAQAWFNKGNVHIQSREPEQALACFKRALELRPAYGEAMSSQ 311

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356
           +      G  D+A A     +   P
Sbjct: 312 AVALQHAGRFDEALAAYDATLAFDP 336


>gi|115949770|ref|XP_001185743.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 583

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           + K           L++         G++  +     ESL+   + + A +  A  L   
Sbjct: 415 RIKYTPHHRSKDQWLVLYGCETQYKLGNLPEAESWFKESLRSKADHVPAHLTYANLLGKT 474

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVS 332
           N+  +AE +LE+   +   PE AN++ H   +N   ++       ++  +     V + +
Sbjct: 475 NRATEAERLLERAVSLE--PENANVFRHYAKDNEKAEVY-YRVAVDLKPDVANGHVNLGA 531

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
            + L  G ++QA A  + A+ + P 
Sbjct: 532 MLHLN-GKLEQAQASYLKALSLKPD 555


>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
 gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1711

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 96/309 (31%), Gaps = 49/309 (15%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMM 146
              L  +   N   A +  + V++    + +  +   LL  +      ++  A   LE +
Sbjct: 239 SRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLART----GKHEEALNALEKL 294

Query: 147 LQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAK 202
           L+  P  T    +          G    A     K+L+  P     W+ + ++   +   
Sbjct: 295 LEYDPDFTEAQKLRGTVLAGL--GRFEEALGPLEKSLEKEPENYNLWLQKGLI--LLDTG 350

Query: 203 EWSRAITFLNQKKKNAKEWNR--------NRAILLIARSLENADKG-------------- 240
           +   AI       +   +             ++     +LE   +G              
Sbjct: 351 KLEPAIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRK 410

Query: 241 --------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                       +     E++KL  +   A       L +  +  KAE    ++ K+NP 
Sbjct: 411 GIVLGKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPE 470

Query: 293 PEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            +I ++Y   +S   +G+    L+   ++  +  +  +    +     E+G  ++A    
Sbjct: 471 -DIDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETF 529

Query: 349 MLAMKIAPR 357
                  P 
Sbjct: 530 EKLASENPY 538



 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 76/261 (29%), Gaps = 43/261 (16%)

Query: 135 QYNIAHEKLEMMLQ-IPATREFAVY-SL-YFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           +Y  A +    +L+  P  RE          +  R+ +   A +   +A+ I P      
Sbjct: 147 RYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNE---AIKAFEEAIKIDPSYFEAW 203

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLI------------------ 230
                  +  + +  A+   +   +   +      +RA+ L+                  
Sbjct: 204 NCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFARVTEL 263

Query: 231 ---------ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                     + L  A  G    + +   + L+   +   A       L    +  +A  
Sbjct: 264 DPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALG 323

Query: 282 ILEKIWKVNPHPEIANIYTH-----LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            LEK  +    PE  N++       L +      +        +N ++    + +     
Sbjct: 324 PLEKSLEKE--PENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMGFALY 381

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
            +   ++A       +++ P 
Sbjct: 382 SLERYEEALEAFKEGLRLNPY 402



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 73/258 (28%), Gaps = 43/258 (16%)

Query: 137 NIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             A E    +L+I            +       G   +A  Y  K + + PD P ++ ++
Sbjct: 455 EKAEEAFAEVLKINPEDIDSLYNRGISLLKL--GRKETALEYLEKVVSLRPDYPDLSYSL 512

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLI-----ARSLENAD-------- 238
                   E+ +A+    +         E    R  L +       +L+  +        
Sbjct: 513 GVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPA 572

Query: 239 -------KGDMIASYHDAIESLKL-------CDNSIMASICAAKSLISQNKKRKAEVILE 284
                  KG  +    +  E++K          +   A +    + +   +   A    E
Sbjct: 573 SREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFE 632

Query: 285 KIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           ++ +  P  + A  Y  +        E      K       +N     +    +K   E 
Sbjct: 633 RVLEKKPDSDTAWYYRGMILYTLQRQEEAA---KAFESASRLNPGLYTAFEYRAKCLFET 689

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G  + A       ++  P
Sbjct: 690 GQYEAAFEAFEAVLEKDP 707



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 27/185 (14%)

Query: 188  PWVTEAVVQQ---YVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMI 243
            P + +A+ +     +   ++  A     +   KN    +      L+ R L+  +  D +
Sbjct: 1278 PELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQNE--DAV 1335

Query: 244  ASYHDAIESLKLCDNSIMASI---CAAKSLISQNKKRKA-EVILEKIWKVNPHPEIANI- 298
             +++ A+E   +  +   A      A  SL    + R A   +LE+       PE A++ 
Sbjct: 1336 EAFNRALE---IKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEES------PENADVL 1386

Query: 299  -------YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                   +  L  E+    L++ L     + +  E+  ++   ++E+   ++A     + 
Sbjct: 1387 YNRAVASFKTLNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMV 1446

Query: 352  MKIAP 356
            ++  P
Sbjct: 1447 LEWEP 1451


>gi|297516104|ref|ZP_06934490.1| tetratricopeptide repeat protein [Escherichia coli OP50]
          Length = 389

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVIPQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|254410290|ref|ZP_05024070.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196183326|gb|EDX78310.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 667

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 16/156 (10%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N   A     R  +   +     +      +L +  +   A      +L    + ++A  
Sbjct: 514 NTANAKTHWQRCYDLNTQQRPQEAIQACDRALAINPDYPEALWSKGAALDQLGRHQEALN 573

Query: 282 ILEKIWKVNPHPEIANIYTH--------LLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           + EK   +   P+ A  + +           E  +  L RA++L      S  + +  ++
Sbjct: 574 LYEKATTLK--PDFAEAWINQGVALILLGQPEKAIPILDRAIQL---KPNSANAWINKAE 628

Query: 334 IALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQ 366
             +E+   D A A    A++I P        L+ A+
Sbjct: 629 AYMELERYDDAIASLKKALEIQPNNEYAATMLIAAE 664



 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            AI   ++      ++    A+     +L+    G    + +   ++  L  +   A I 
Sbjct: 536 EAIQACDRALAINPDYP--EALWSKGAALDQL--GRHQEALNLYEKATTLKPDFAEAWIN 591

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLS-ENTVGKLKRALRLEE 319
              +LI   +  KA  IL++  ++ P+        A  Y  L   ++ +  LK+AL + +
Sbjct: 592 QGVALILLGQPEKAIPILDRAIQLKPNSANAWINKAEAYMELERYDDAIASLKKALEI-Q 650

Query: 320 INKESVESLVIVSKI 334
            N E   +++I ++ 
Sbjct: 651 PNNEYAATMLIAAEA 665



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 10/134 (7%)

Query: 170 LNSAQRYATKALDISPDAP---WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
              A +   +AL I+PD P   W   A + Q    +    A+    +      ++    A
Sbjct: 534 PQEAIQACDRALAINPDYPEALWSKGAALDQLGRHQ---EALNLYEKATTLKPDF--AEA 588

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +    +L     G    +      +++L  NS  A I  A++ +   +   A   L+K 
Sbjct: 589 WINQGVALILL--GQPEKAIPILDRAIQLKPNSANAWINKAEAYMELERYDDAIASLKKA 646

Query: 287 WKVNPHPEIANIYT 300
            ++ P+ E A    
Sbjct: 647 LEIQPNNEYAATML 660


>gi|322701876|gb|EFY93624.1| DnaJ and TPR domain protein [Metarhizium acridum CQMa 102]
          Length = 520

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 86/306 (28%), Gaps = 39/306 (12%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A+   L++ A           + V+            L   Q  LA  + + A    +  
Sbjct: 9   AVTASLLASA----------TNLVAHDIPVDLPVSTLLTSAQSHLARGETSEALAYYDAA 58

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           +    +    ++        +G  N A     + L++ P        + +      +W  
Sbjct: 59  VAKDPSNYVTLFKRATTYLSLGRSNQASEDFGRVLELKPGFEGAHIQLAKIKAKVADWEG 118

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A +      K   E      +    R+ + A+  +   ++ + I       +    +I  
Sbjct: 119 ARSE-YMAAKRNDESTELVELAEAQRAADLAEAAERDKNWEECI-------SHAGVAILV 170

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           A    S  ++R                     +     E  +  L   L+L      S++
Sbjct: 171 ASRAPSLRERRSRCR-----------------FQRGEIEEGMSDLHHVLQL---RPGSID 210

Query: 327 SLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
             +++ +     +   D A A+    +   P  +I   L + E+ +     K        
Sbjct: 211 PHILISATTFYALADFDNAIAQVRKCLHSDPDSKICKALHKQERRHQKAFQKAESQLNRG 270

Query: 386 LHAMPD 391
                 
Sbjct: 271 QTTSAG 276


>gi|212532633|ref|XP_002146473.1| heat shock protein (Sti1), putative [Penicillium marneffei ATCC
           18224]
 gi|210071837|gb|EEA25926.1| heat shock protein (Sti1), putative [Penicillium marneffei ATCC
           18224]
          Length = 578

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 48/158 (30%), Gaps = 12/158 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A E     L    T +           ++     A+  A K   ISP+  
Sbjct: 338 AYEKLGDLGNAIEYYNRSLTEHRTADVL--------TKLRAAEKAKIKAEKDAYISPEEA 389

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                + Q+     +W  A+    +  K A E  R        R+           +  D
Sbjct: 390 EKARELGQKKFQEADWPAAVDAFTEMTKRAPEDPRG----FSNRAAALIKLMAFPQAVTD 445

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             E++K     I A I  A++L +  +  KA   L + 
Sbjct: 446 CDEAIKRDPAFIRAYIRKAQALQAMKEYNKALDALTEA 483


>gi|187922595|ref|YP_001894237.1| hypothetical protein Bphyt_0588 [Burkholderia phytofirmans PsJN]
 gi|187713789|gb|ACD15013.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN]
          Length = 613

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 97/286 (33%), Gaps = 15/286 (5%)

Query: 108 SYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--L 160
           +    Q +     L       +L  ++AL   Q   A++    + +       A  +  +
Sbjct: 67  ASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEI 126

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +    D  +A +        +P++    +      VL+ +   A   L ++      
Sbjct: 127 ALAAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGKPDDASPILARELARVPA 183

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            NR  AIL +   L      + I   H   + LK   N   A +  A+  +  +    A 
Sbjct: 184 DNRGSAILALQLLLS--RGPNRIGGLHVLQDLLKNDMNRPEAQLAIARQQLVSDDAPGAR 241

Query: 281 VILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             LE+   + P   P  A   + +  E     +    +  + N +S ++ + ++++ L  
Sbjct: 242 KSLEQALALKPDYLPA-ALTLSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLAS 300

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
             +D A  +  +  K    +   L+   + +    N ++   +   
Sbjct: 301 DRLDDAQKQFEIMHKNNANELTPLMALALIKIQQKNFNEAQAYLTQ 346



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 45/244 (18%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L   Q+ LA  + + A ++ E+M +  A     + +L     +  + N AQ Y     
Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMHKNNANELTPLMALALIKIQQKNFNEAQAY----- 343

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                                            ++  K    +     I  +  + ++ +
Sbjct: 344 ----------------------------LTQYAQQAEKTPGADPGQAYIYLAQLSLEQKN 375

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
             A+     +        + A I  A+ L  Q K   A  +L       P P+  +    
Sbjct: 376 EAAASDWLNKISPSSQQYVPAQITRAQLLAKQGKVDDARKLL----ANLPAPDPRDQALL 431

Query: 302 LLSENT--------VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + ++               R  +      +  +     +  A + G  D   A+    ++
Sbjct: 432 MRTDAAILFDAKRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYDVMEAQLRKLIQ 491

Query: 354 IAPR 357
             P 
Sbjct: 492 TQPD 495


>gi|46136823|ref|XP_390103.1| hypothetical protein FG09927.1 [Gibberella zeae PH-1]
          Length = 613

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 64/197 (32%), Gaps = 5/197 (2%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +S+       A     +        N+  VY    Q    +     A +  +  + +   
Sbjct: 368 ISLELGEPEKAE--AEFAKALEQDKNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKD 425

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             F+   L     ++G + S+     + +   P  P V     +  +    +S A+   +
Sbjct: 426 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQGNFSEAVEKFD 485

Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  K+        + LI ++L     K D   +     ++L +     +A    A+ 
Sbjct: 486 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEALCKKALIIDPECDIAVATMAQL 545

Query: 270 LISQNKKRKAEVILEKI 286
           L+ QN    A    E+ 
Sbjct: 546 LLQQNNVPAALKYFERA 562


>gi|157149134|ref|YP_001456453.1| cellulose synthase subunit BcsC [Citrobacter koseri ATCC BAA-895]
 gi|157086339|gb|ABV16017.1| hypothetical protein CKO_04973 [Citrobacter koseri ATCC BAA-895]
          Length = 1194

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 70/195 (35%), Gaps = 5/195 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A         I  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 391 QGDAALKANNPDQAERLYRQARSIDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 450

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++ S  I  L+ +++ + +          L  ++    ++G+
Sbjct: 451 GNSNAVRGLANIYRQQSPEKASAFIASLSSRQRQSIDDIERSLENDRLAQQAEALENQGN 510

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +       L L   S+  +   ++ L +  ++ +A+  +  + +  P+ P+    Y 
Sbjct: 511 WAQAAELHRRRLALDPGSVWVTYRLSRDLWNAGQRSQADAHMRALARQKPNDPDQVYAYG 570

Query: 301 HLLSENTVGKLKRAL 315
             L+ N   +   A 
Sbjct: 571 LYLAGNDQDRAAMAH 585



 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 98/326 (30%), Gaps = 30/326 (9%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A +++          +  ++ L    +A+A + Y  A    +
Sbjct: 386 WLAIQQGDAALKANNPDQAERLYRQARSIDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 443

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV----VQQYVL 200
             L++ +    AV  L     +     ++   A+ +         +  ++    + Q   
Sbjct: 444 QTLRMDSGNSNAVRGLANIYRQQSPEKASAFIASLSSRQRQSIDDIERSLENDRLAQQAE 503

Query: 201 A----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           A      W++A   L++++      +      L         +    A            
Sbjct: 504 ALENQGNWAQA-AELHRRRLALDPGSVWVTYRLSRDLWNAGQRSQADAHMRALARQKPND 562

Query: 257 DNSIMASICAAKSLISQNKKRKAE-----VILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
            +     + A    ++ N + +A       +    W  N   E+A+   +     T  +L
Sbjct: 563 PD----QVYAYGLYLAGNDQDRAAMAHINNLPRSQWNSNIQ-ELADRLQNNQVLETASRL 617

Query: 312 K------RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-L 364
           +       A  L      S    + ++  A +      A A     +   P      L L
Sbjct: 618 RDSGKEREAETLLRQQPASTRIDLTLADWAQQRRDYSSARAAYDAVLAREPGNVDARLGL 677

Query: 365 AQIEQANSHNTDKILYWTQSALHAMP 390
            ++  A   +           L A  
Sbjct: 678 TEVYIAQ-GDNAAARAELAK-LPAPA 701



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 12/160 (7%)

Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R        +     +     + L     A   R Y+ A    + +L        A   L
Sbjct: 618 RDSGKEREAETLLRQQPASTRIDLTLADWAQQRRDYSSARAAYDAVLAREPGNVDARLGL 677

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-----KEWSRAITFLNQ-- 213
                  GD  +A+  A  A   +P         +Q+ +        +   A    N   
Sbjct: 678 TEVYIAQGDNAAAR--AELAKLPAPATGEPLSINMQRRMARAQAQLGDTVAAQQTFNTIV 735

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +  ++  +   A++L   +   A  G+   +     +++
Sbjct: 736 PQAKSQPPSMETAMVLRDAAGFQAQNGEPQQALETYKDAM 775


>gi|254374763|ref|ZP_04990244.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151572482|gb|EDN38136.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 385

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+++ +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSAFRFPYLLFSWVIGLFSVDKQER 87


>gi|82544265|ref|YP_408212.1| tetratricopeptide repeat protein [Shigella boydii Sb227]
 gi|81245676|gb|ABB66384.1| putative heat shock protein [Shigella boydii Sb227]
 gi|332094767|gb|EGI99811.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74]
          Length = 389

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      N    SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|189463137|ref|ZP_03011922.1| hypothetical protein BACCOP_03848 [Bacteroides coprocola DSM 17136]
 gi|189430116|gb|EDU99100.1| hypothetical protein BACCOP_03848 [Bacteroides coprocola DSM 17136]
          Length = 316

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 81/198 (40%), Gaps = 15/198 (7%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +   +A+ ++ D P   + +   Y+ A     A   L++   +    N      L+A 
Sbjct: 45  AIKCFEQAIALN-DEPETLQLLANAYIEAGRTDDARITLDR-LVDKTPDNIQ---ALLAL 99

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     + D  +      +++KL + S  A   AAK+        +A V+L K   +  +
Sbjct: 100 ASICYMQEDYESMDDACQKAIKLDETSAPAYYLAAKAARGMKNDLQAIVMLTKA--IMQN 157

Query: 293 PEIANIYTHLLSE------NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            E    Y  L +E           +    ++  ++ +  ++L++  +I   +G +++A +
Sbjct: 158 EEYKEAYL-LRAEVLWDMRQAKDAMSDLNKVLSVSPDEEDALLLKGRIHAALGQVEEAQS 216

Query: 347 KAMLAMKIAP-RKEIFLL 363
                +++ P  ++ +LL
Sbjct: 217 CFNQVLEVNPFNEKAYLL 234



 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 18/203 (8%)

Query: 99  NIPLARKMH------SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +   AR M           Q    ++E     L     +   + + A   L+ ++     
Sbjct: 32  DGIRARNMRQLPYAIKCFEQAIALNDEPETLQLLANAYIEAGRTDDARITLDRLVDKTPD 91

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTEAVVQQYVLAKEWSRAI 208
              A+ +L        D  S      KA+ +    +P      +A      +  +  +AI
Sbjct: 92  NIQALLALASICYMQEDYESMDDACQKAIKLDETSAPAYYLAAKA---ARGMKND-LQAI 147

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +     +E+    A LL  R+    D      +  D  + L +  +   A +   +
Sbjct: 148 VMLTKAIMQNEEYK--EAYLL--RAEVLWDMRQAKDAMSDLNKVLSVSPDEEDALLLKGR 203

Query: 269 SLISQNKKRKAEVILEKIWKVNP 291
              +  +  +A+    ++ +VNP
Sbjct: 204 IHAALGQVEEAQSCFNQVLEVNP 226


>gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 938

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 12/167 (7%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             LL  +I   +   + + +  E + +    +      L     + GD + A  Y  + L
Sbjct: 752 SKLLLAEIYEKQNDLDNSIKIYEELKENDDVKFK----LAKILLQKGDYDKASAYFKELL 807

Query: 182 DISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +  P     ++  + + Y L      A+++L    K++   +   +  L+       +K 
Sbjct: 808 EKHPEKVNELSFYIGKTYYLMNNEKDAVSYLENGTKSSNYNDAAESYYLLGM---IYNKE 864

Query: 241 DMIASYHDAIESLKLCDNSIMASIC----AAKSLISQNKKRKAEVIL 283
           +   + +  +  + L   +   +      AAK L+   K+++A  +L
Sbjct: 865 NPNKALNYFLNGIYLYPEAKDITAKSRIEAAKILLKAEKRKEASCLL 911


>gi|330961815|gb|EGH62075.1| peptidase aspartic, active site protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 654

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 92/314 (29%), Gaps = 45/314 (14%)

Query: 78  KRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQ---QHTFHNEYLVY---LLEV 127
           K     GY      L + A    + +   ARK  +   +         E L     L E 
Sbjct: 92  KARPKPGYLEGNQALRAYARQDYSGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDEA 151

Query: 128 QIALAERQYNIA----------HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           Q A+       A           + ++  + +              +   GD  +A   A
Sbjct: 152 QTAI--NDAEQALGPQPVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDHETAVSEA 203

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             A+   P      + +V   +   +++ A +   +        N N A LL+ R     
Sbjct: 204 RDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMRQ 259

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPE 294
             GD   +  D  ++  +   ++      A    +  +  +A   L++        P  E
Sbjct: 260 RLGDQSGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRLQQARGAGELQPGDE 316

Query: 295 IANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAK 347
           +   Y    + +    +   KR  R   +      ++  S +     A  +    +    
Sbjct: 317 VQIAYFLSQAGDDKGALDTFKRVDRQSGLKPREVQDAAYSAMRTPDDAQAIAYFKRVLDY 376

Query: 348 AMLAMKIAPRKEIF 361
                   P +++F
Sbjct: 377 QQTGDLQMPAQQVF 390



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 25/210 (11%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           L                 TG  ++A  +   A  +        +F  +     L V   +
Sbjct: 168 LTRRRQAIQEQVAVDKAATGYKALARGDHETA--VSEARDAVRSFPKQMAYRKLLVSALI 225

Query: 132 AERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A+ QY  A         +    AT          +  R+GD + A++   +A+ +  + P
Sbjct: 226 AQGQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQSGARQDFAQAMAVG-NLP 281

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SLENADKG 240
              +A +  Y    + S A+  L Q +   +         A  L        +L+   + 
Sbjct: 282 LREQASL--YAAMGQPSEALQRLQQARGAGELQPGDEVQIAYFLSQAGDDKGALDTFKRV 339

Query: 241 D------MIASYHDAIESLKLCDNSIMASI 264
           D             A  +++  D++   + 
Sbjct: 340 DRQSGLKPREVQDAAYSAMRTPDDAQAIAY 369


>gi|331235475|ref|XP_003330398.1| pre-mRNA-splicing factor prp1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309309388|gb|EFP85979.1| pre-mRNA-splicing factor prp1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 933

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 93/285 (32%), Gaps = 42/285 (14%)

Query: 131 LAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + A +      E     P + +  + ++  ES   G + +A++   +A D++  
Sbjct: 601 QTNNDVDGARKILGDAFEA---NPESEQVWLAAVKLESEN-GQIEAAKQLMKRARDVAGT 656

Query: 187 AP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              W+  AV ++         A+    +         +   I    +      K D+  +
Sbjct: 657 ERIWIKNAVFERQ--HGSVDEALEITEKALVKFPSSEKLHMI----KGQILESKEDVSGA 710

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------------- 291
                   K C   I   I +++         KA  I+E+    NP              
Sbjct: 711 RGAYAIGTKKCPKCIPLWILSSRLEERVGMTIKARAIMERARHHNPKNEELWSESCSIEE 770

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
               H   ++     +       + RAL+      +   S ++ S+ ++      Q  A+
Sbjct: 771 RAGGHTTGSSTNASAVGIQARNMMSRALQ------DCPNSGLLYSQ-SIWYEPRPQRKAR 823

Query: 348 AMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              A+K       + + +A++  A     DK+  W + A+ A  D
Sbjct: 824 GADALKKCNNDPRVIVTVARLLWAERK-LDKVRNWLEKAIVADSD 867


>gi|254412859|ref|ZP_05026632.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196180594|gb|EDX75585.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 435

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                E  + GDL  A +   +AL I+P+                +   AI   +Q  + 
Sbjct: 8   RG--REKAQQGDLEGAIQEFEQALRINPEFAEAYYRRGLARFDLGDCQSAIADYSQALRV 65

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E         + RSL    +G+  AS  DA + L++  N   A      +     K +
Sbjct: 66  NPE----HLDSYLGRSLAYLAQGEAQASLEDAQQVLQIDGNREAAYKLQGTAYRRLGKTK 121

Query: 278 KAEVILEKI 286
           +A    ++ 
Sbjct: 122 EAIASFKQA 130


>gi|134296995|ref|YP_001120730.1| hypothetical protein Bcep1808_2904 [Burkholderia vietnamiensis G4]
 gi|134140152|gb|ABO55895.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia vietnamiensis
           G4]
          Length = 607

 Score = 46.1 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 82/223 (36%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A    +    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 169 ARELARATGETRGQAILALQALL---VRGADRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             +     D   +     ++L++  + + A++     L       +A  I      V  +
Sbjct: 224 --QQLAVDDKEGAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D A A 
Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFESMRKLDSKDPTPLMALALIKIQQKKLDDASAY 337

Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++      + ++ LAQI      N  +   W   
Sbjct: 338 LKQYVQLGTKQPNLDVGQGYIYLAQI-AIEQGNDAQASQWLDK 379



 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 11/261 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +L  ++AL   Q   A++    + +       A  +    +        A   A   L 
Sbjct: 81  QVLAAEVALQRNQPAPAYQTYLALARDTRDPRMAQRATEI-ALGAQSPADALSAANLWLQ 139

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +PD+   ++      VLA + + A   L ++   A    R +AIL +   L      D 
Sbjct: 140 YAPDSNRASQVDAALLVLAGKPADAQPMLARELARATGETRGQAILALQALL--VRGADR 197

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           +       + LK   N   A +  A+  ++ + K  A   L++  ++   P+       L
Sbjct: 198 VGGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKEGAAQSLKQALQIR--PDYLPAALML 255

Query: 303 LSENTVGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK---AMLAMKIAP 356
                  +   +    +  + N +S ++ + +S++ L    +D A  +           P
Sbjct: 256 SQMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFESMRKLDSKDP 315

Query: 357 RKEIFLLLAQIEQANSHNTDK 377
              + L L +I+Q    +   
Sbjct: 316 TPLMALALIKIQQKKLDDASA 336


>gi|226288700|gb|EEH44212.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb18]
          Length = 747

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVL- 200
           Q P      +          G+   A ++   AL + PD+          + +++     
Sbjct: 428 QDPDALF--LRG--RLFYAQGENEQAIKHFKLALSLDPDSSQAIKYLRMVQKLLRMKDEG 483

Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                ++++ +AI   ++  +   +     + LL  R+    +      S  D  ++L+L
Sbjct: 484 NAAYKSRKYQQAIDIYSKALEVDPKNKNINSKLLQNRAQSYLNLNKYEKSIEDCTKALEL 543

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             + + A    AK+        +A   L+KI + NP
Sbjct: 544 DPSYVKAQRVRAKAYGGAGNWEEAVQDLKKISEANP 579


>gi|33865520|ref|NP_897079.1| TPR domain-containing protein [Synechococcus sp. WH 8102]
 gi|33632689|emb|CAE07501.1| TPR domain protein [Synechococcus sp. WH 8102]
          Length = 928

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 78/240 (32%), Gaps = 37/240 (15%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWN 222
           + R      A+    +A+  +PD  W             +   AIT L Q  ++     +
Sbjct: 253 AYRSSRYAEAEIAFAQAVTQAPDHLWSWLQWANSQRRQGQIDAAITTLEQLTEQLPGAAD 312

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKL------CDNSI---------------- 260
             R + L+ +   +  K         A++   L       D  +                
Sbjct: 313 GWRNLALLHQQKGHLAKAREALENLLALQPNNLGSIGLLADGLVQCQALDDAESLLRSAT 372

Query: 261 ------MASI----CAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENT 307
                   ++      A  L+ +  KRKA   L     ++P      +A     L +   
Sbjct: 373 HGLGQQPKAVGLWHRLAHLLVQRGDKRKAFNALHNGLLLDPSDSACALAQATLLLEAGQP 432

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              LK    L +   E + +L   ++I   MG ++ + A     ++  P + + LLL +I
Sbjct: 433 EAALKAVNALLKHQPEQIAALQRKAEILQFMGELEASLALCRQGLQQEP-QRLELLLLEI 491



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 10/205 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVY--------LLEVQIALAERQYNIAHEKLEMM 146
           +A     +A +   Y   +  F    +          L        + Q + A   LE +
Sbjct: 245 VAFQQGRIAYRSSRYAEAEIAFAQ-AVTQAPDHLWSWLQWANSQRRQGQIDAAITTLEQL 303

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +          +L     + G L  A+      L + P+       +    V  +    
Sbjct: 304 TEQLPGAADGWRNLALLHQQKGHLAKAREALENLLALQPNNLGSIGLLADGLVQCQALDD 363

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A + L +   +          L    +     +GD   +++     L L  +    ++  
Sbjct: 364 AESLL-RSATHGLGQQPKAVGLWHRLAHLLVQRGDKRKAFNALHNGLLLDPSDSACALAQ 422

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
           A  L+   +   A   +  + K  P
Sbjct: 423 ATLLLEAGQPEAALKAVNALLKHQP 447


>gi|207722026|ref|YP_002252464.1| tpr domain protein [Ralstonia solanacearum MolK2]
 gi|206587200|emb|CAQ17784.1| tpr domain protein [Ralstonia solanacearum MolK2]
          Length = 700

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 3/150 (2%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +       + A E +   A      +   + +G    +   A  +++L    + A +  A
Sbjct: 165 LERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLA 224

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKES 324
           ++ I +++   A  +L+++    P HP    A        E     L  A +   +   S
Sbjct: 225 EAEIGRHRHEAALRVLDRLSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALAPHS 284

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            E+   ++     +G  D+A      A ++
Sbjct: 285 AETHHALAMALQALGQTDEALPHFEQAARL 314



 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 66/230 (28%), Gaps = 43/230 (18%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            RI   + A   A +A+ ++P +     A+        +   A+    Q  +       +
Sbjct: 262 RRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQTDEALPHFEQAARLPGAVAED 321

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               L+ R++   + G   A+     ++L+    S+      A++  +  +  KA     
Sbjct: 322 ---ALVGRAILLMEAGRRDAALAAFDQALEQFPGSV-----QARAGRADARTFKAGD--- 370

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                   P+IA +   L       +  R                 + K  L++    QA
Sbjct: 371 --------PDIAALEACLADGERRSQRDRISA-----------HFALGKAYLDLQDPAQA 411

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393
                   +       +            + D    W      A  P+P 
Sbjct: 412 FHHLDAGNRQKRSTFTY------------DGDASSRWMAHIADAFPPEPH 449



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 79/266 (29%), Gaps = 31/266 (11%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A       L++      A  +L F     G  + A   A  A+++SP        + +
Sbjct: 166 ERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAE 225

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +       A+  L++       +       L AR+           +   A +++ L 
Sbjct: 226 AEIGRHRHEAALRVLDR----LSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALA 281

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
            +S       A +L +  +  +A           PH E A      ++E+ +  + RA+ 
Sbjct: 282 PHSAETHHALAMALQALGQTDEAL----------PHFEQAARLPGAVAEDAL--VGRAIL 329

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQA--------HAKAMLAMKIAPRKEIFLL-LAQI 367
           L E  +         +  A +                A A       P        LA  
Sbjct: 330 LMEAGRRDA------ALAAFDQALEQFPGSVQARAGRADARTFKAGDPDIAALEACLADG 383

Query: 368 EQANSHNTDKILYWTQSALHAMPDPL 393
           E+ +  +     +    A   + DP 
Sbjct: 384 ERRSQRDRISAHFALGKAYLDLQDPA 409


>gi|71907572|ref|YP_285159.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71847193|gb|AAZ46689.1| TPR repeat:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB]
          Length = 952

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 107/314 (34%), Gaps = 43/314 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +  A+ +   AR  +  V  +       ++ L+ + I    ++++ A  +L+ +L+  
Sbjct: 502 GTIKGASGDKAGARSAYLQVLAKDAAFAPSVLNLVRLDIGE--KRFDEARRRLDALLKKD 559

Query: 151 --ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               +    Y L  +  R      A R+ TKA D+    P  T A++  Y+  ++  +A+
Sbjct: 560 SNDYQVLFEYGLLEQ--RAERPAEAIRHLTKAGDVQRTDPGPTLALIDLYLNQRQGEQAL 617

Query: 209 -----------------TFLNQKKKNAKEWNRNRAILLIAR-------------SLENAD 238
                              L +      +    R +L  A              +     
Sbjct: 618 KAAKALVSKFSTSLRVQQALARTYLATGDAVNARNVLTTATRLAEFDPKAQVSIARMQLA 677

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--- 295
             +   + +   ++L+   + + A   A +    +    KA+V L  +   +P+ ++   
Sbjct: 678 AANPNGAAYSVSKALQGNPDDVAALALAVQVEARRGDSGKADVALRTLTSKHPN-DVETI 736

Query: 296 -ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            A     ++       +    +L    +E+  + + +       G   +A A     +K 
Sbjct: 737 RAGAELAMMRGQYQAAVTGYRKLVA-REETSGNALALVDAQTRAGESGKASAFLEAWVKT 795

Query: 355 AP-RKEIFLLLAQI 367
            P  +     LA I
Sbjct: 796 HPEDQRAQKALADI 809



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 84/263 (31%), Gaps = 11/263 (4%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           M +AA N   A   +S         ++     L VQ+         A   L  +      
Sbjct: 674 MQLAAANPNGAA--YSVSKALQGNPDDVAALALAVQVEARRGDSGKADVALRTLTSKHPN 731

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               + +    +   G   +A     K L    +      A+V     A E  +A  FL 
Sbjct: 732 DVETIRAGAELAMMRGQYQAAVTGYRK-LVAREETSGNALALVDAQTRAGESGKASAFLE 790

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              K   E  R +  L    +      G +  +     + L    +  ++    A  L+ 
Sbjct: 791 AWVKTHPEDQRAQKAL----ADILFRVGQLPVAKQAYQKLLAANPDDAVSLNNYANLLLQ 846

Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLV 329
            N    A+ + EK   ++P HP  A+   +  +  E     L+        + E+ +   
Sbjct: 847 MNDPS-AQQVAEKAINLSPNHPAYADTLGWILVHKEQLETGLRYLREARLRSPENGDIRF 905

Query: 330 IVSKIALEMGSIDQAHAKAMLAM 352
            ++    + G  D+A  +   A+
Sbjct: 906 HLAYALAKAGRRDEAKEELRAAI 928



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 86/251 (34%), Gaps = 15/251 (5%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR-----YATKALDISPDAPW 189
           + + A +  E M++  +    A+  L       GD   A+       A  A   +P    
Sbjct: 476 KKDKAMKTAEAMVKQDSANLTALNFLGTIKGASGDKAGARSAYLQVLAKDA-AFAPSVL- 533

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +V+  +  K +  A   L+   K ++ ++       L+ +  E     + I     
Sbjct: 534 ---NLVRLDIGEKRFDEARRRLDALLKKDSNDYQVLFEYGLLEQRAE--RPAEAIRHLTK 588

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           A +  +        ++        Q ++  KA   L   +  +   + A   T+L + + 
Sbjct: 589 AGDVQRTDPG-PTLALIDLYLNQRQGEQALKAAKALVSKFSTSLRVQQALARTYLATGDA 647

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
           V           + +   ++ V ++++ L   + + A      A++  P     L LA  
Sbjct: 648 VNARNVLTTATRLAEFDPKAQVSIARMQLAAANPNGAAYSVSKALQGNPDDVAALALAVQ 707

Query: 368 EQANSHNTDKI 378
            +A   ++ K 
Sbjct: 708 VEARRGDSGKA 718


>gi|328789632|ref|XP_396581.4| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Apis
           mellifera]
          Length = 1255

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 87/267 (32%), Gaps = 13/267 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +   +    V L      +       A    E  L
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224

Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           Q+      A+  L          +   +  +  +KA  I    P V   +   +   K++
Sbjct: 225 QLDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263
           ++ +  L     +  E    RA      +     +GD   ++    ++ +      ++  
Sbjct: 285 NK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317
               +  + +     A    EK+ K  P        + ++Y +  S++     K    ++
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344
            E   + VE+ + +++I LE   ++ A
Sbjct: 404 TEQFPDDVEAWIELAQI-LEQSDLNAA 429


>gi|110802108|ref|YP_699265.1| TPR repeat-containing protein [Clostridium perfringens SM101]
 gi|110682609|gb|ABG85979.1| tetratricopeptide repeat protein [Clostridium perfringens SM101]
          Length = 311

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 6/194 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156
              L + ++ Y+  +     E  + L+     + +       A EK E  L I +    A
Sbjct: 21  EGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA 80

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            Y L        D   A     KA+DI+P        +        +   AI +     K
Sbjct: 81  YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEY----YK 136

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E  +      I       ++  +  +Y    ++L++     +A           N  
Sbjct: 137 KTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVY 196

Query: 277 RKAEVILEKIWKVN 290
            KA+   EK  K N
Sbjct: 197 DKAKKFYEKAIKKN 210


>gi|110801298|ref|YP_696667.1| TPR repeat-containing protein [Clostridium perfringens ATCC 13124]
 gi|168204828|ref|ZP_02630833.1| tetratricopeptide repeat protein [Clostridium perfringens E str.
           JGS1987]
 gi|168208689|ref|ZP_02634314.1| tetratricopeptide repeat protein [Clostridium perfringens B str.
           ATCC 3626]
 gi|168212976|ref|ZP_02638601.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str.
           F4969]
 gi|168215614|ref|ZP_02641239.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC
           8239]
 gi|169343485|ref|ZP_02864484.1| tetratricopeptide repeat protein [Clostridium perfringens C str.
           JGS1495]
 gi|182624441|ref|ZP_02952225.1| tetratricopeptide repeat protein [Clostridium perfringens D str.
           JGS1721]
 gi|110675945|gb|ABG84932.1| tetratricopeptide repeat protein [Clostridium perfringens ATCC
           13124]
 gi|169298045|gb|EDS80135.1| tetratricopeptide repeat protein [Clostridium perfringens C str.
           JGS1495]
 gi|170663553|gb|EDT16236.1| tetratricopeptide repeat protein [Clostridium perfringens E str.
           JGS1987]
 gi|170713212|gb|EDT25394.1| tetratricopeptide repeat protein [Clostridium perfringens B str.
           ATCC 3626]
 gi|170715614|gb|EDT27796.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str.
           F4969]
 gi|177910444|gb|EDT72821.1| tetratricopeptide repeat protein [Clostridium perfringens D str.
           JGS1721]
 gi|182382051|gb|EDT79530.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC
           8239]
          Length = 311

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 6/194 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156
              L + ++ Y+  +     E  + L+     + +       A EK E  L I +    A
Sbjct: 21  EGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA 80

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            Y L        D   A     KA+DI+P        +        +   AI +     K
Sbjct: 81  YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEY----YK 136

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E  +      I       ++  +  +Y    ++L++     +A           N  
Sbjct: 137 KTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVY 196

Query: 277 RKAEVILEKIWKVN 290
            KA+   EK  K N
Sbjct: 197 DKAKKFYEKAIKKN 210


>gi|18310970|ref|NP_562904.1| tetratricopeptide repeat protein [Clostridium perfringens str. 13]
 gi|18145652|dbj|BAB81694.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 311

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 6/194 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156
              L + ++ Y+  +     E  + L+     + +       A EK E  L I +    A
Sbjct: 21  EGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA 80

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            Y L        D   A     KA+DI+P        +        +   AI +     K
Sbjct: 81  YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEY----YK 136

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E  +      I       ++  +  +Y    ++L++     +A           N  
Sbjct: 137 KTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVY 196

Query: 277 RKAEVILEKIWKVN 290
            KA+   EK  K N
Sbjct: 197 DKAKKFYEKAIKKN 210


>gi|296416317|ref|XP_002837827.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633710|emb|CAZ82018.1| unnamed protein product [Tuber melanosporum]
          Length = 553

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 51/165 (30%), Gaps = 16/165 (9%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A   L    Q P         LY +    G+   A  +  +AL   PD       + +  
Sbjct: 225 AMSLLRQNAQDPDALVLRGRILYAQ----GENQKASLHFQEALRCDPDMKQARIFLRRSR 280

Query: 199 VLA------------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            L              ++  A    ++            A L   R++ N    +   + 
Sbjct: 281 ELEKKKEAGNEAFKKGDYKIARELYSEALAVDPSNKGTNAKLYQNRAVANTKLQNWEEAL 340

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D+ E++KL      A    AK+L       +A   L+ +   NP
Sbjct: 341 ADSDEAIKLDSTYTKARKTRAKALGQMGNWEEAVRELKAVSDANP 385


>gi|159044505|ref|YP_001533299.1| hypothetical protein Dshi_1957 [Dinoroseobacter shibae DFL 12]
 gi|157912265|gb|ABV93698.1| hypothetical protein Dshi_1957 [Dinoroseobacter shibae DFL 12]
          Length = 475

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 84/267 (31%), Gaps = 9/267 (3%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           +  L E + + A  +L+MM++       A+ +      R   L  A  Y  +AL++ P  
Sbjct: 26  RSLLREGRTDEARAELQMMIEADPQDTRAMMAFAMSLVREQRLEEAAPYVERALEVEPGN 85

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                   Q  V       A    ++  +      R     L+  +  +       A+  
Sbjct: 86  TTAALMGAQIGVRGGNAEYAEAHYHKALQADPRNMR----ALMGLARLHGQNQKPEAAIE 141

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLS 304
               +L++   S       A  L    K  +A+  L      NP+ + A++      + +
Sbjct: 142 VLQTALEVDPQSARVRRQLATLLQRTEKTEEAKAQLRAALTANPNDQGASVQLANICMRA 201

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--KIAPRKEIFL 362
            +T   ++      E   ++    + + ++ L       A A        +      I L
Sbjct: 202 GDTAEAIQVLETALEAQPDNRRLTMSLGRMRLRAEDYAGAEATLRPLTTGQRGGMARIAL 261

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAM 389
           + A I Q        +L  +       
Sbjct: 262 VQALIPQGKLTEARTLLASSSRGARTP 288



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 71/278 (25%), Gaps = 45/278 (16%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEM 145
              +M+ A   +   R   +    +     E       L+  QI +       A      
Sbjct: 52  TRAMMAFAMSLVREQRLEEAAPYVERALEVEPGNTTAALMGAQIGVRGGNAEYAEAHYHK 111

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            LQ       A+  L     +     +A      AL++ P +                  
Sbjct: 112 ALQADPRNMRALMGLARLHGQNQKPEAAIEVLQTALEVDPQSA----------------- 154

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                            R  A LL           +  A    A+ +         AS+ 
Sbjct: 155 --------------RVRRQLATLL----QRTEKTEEAKAQLRAALTANPNDQG---ASVQ 193

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINK 322
            A   +      +A  +LE   +  P      +      L +E+  G       L    +
Sbjct: 194 LANICMRAGDTAEAIQVLETALEAQPDNRRLTMSLGRMRLRAEDYAGAEATLRPLTTGQR 253

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
               + + + +  +  G + +A      + + A    +
Sbjct: 254 GG-MARIALVQALIPQGKLTEARTLLASSSRGARTPSL 290


>gi|17227939|ref|NP_484487.1| hypothetical protein all0443 [Nostoc sp. PCC 7120]
 gi|17129788|dbj|BAB72401.1| all0443 [Nostoc sp. PCC 7120]
          Length = 290

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 72/209 (34%), Gaps = 20/209 (9%)

Query: 160 LYFESCRIGD---LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  E+ ++G       A   A  A  ++P    V   +    +  K +  AI  LN+   
Sbjct: 47  LAQEAAQLGQFQQYELALARARLASQLAPGNDKVWFLLGGLQLQTKNFDGAIASLNR--- 103

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-------NSIMASICAAKS 269
            +K  N   A +L A    N  +    A+       L L         +   A     + 
Sbjct: 104 -SKTINPKNADVLFALGSANFQQKKYQAAIEHYQAGLALKPNEADGLFDLGNAYYMIGRL 162

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
             +  +  KA     K W     P I NI   +    N    +KR      I+K++ E L
Sbjct: 163 PDAIAQYNKAVAQDRKFW-----PAINNIGLINYEQGNVSEAIKRWQTAVSIDKQAAEPL 217

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + ++      G   Q  +    A++I PR
Sbjct: 218 LALAVALYTKGDRQQGISLGEAALRIDPR 246


>gi|262305005|gb|ACY45095.1| acetylglucosaminyl-transferase [Plathemis lydia]
          Length = 275

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGFVEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200


>gi|254784361|ref|YP_003071789.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
           T7901]
          Length = 733

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 79/196 (40%), Gaps = 8/196 (4%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           NSA+++   AL + P        + + +  + E+ +AI  ++Q      + N   A LL 
Sbjct: 413 NSAKQHCELALKLDPTHTGAIRTMAEIHRQSGEYDQAIQLIDQVLAREPD-NTPAARLLA 471

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
               +  +    +    D I+  +   + +      A+  +      KA    +K+ ++ 
Sbjct: 472 LTYHDKNESAKGVRILEDCIQ--RHPKDFVNYKDL-ARIYLDNGNLEKAITNYKKVLEIT 528

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHAK 347
           P    A     + S   +G+LK+A +  E+    ++ L     +  +   +G  D+A  +
Sbjct: 529 PQNNAALNNLGI-SYYFLGELKQARKYFELATRLIQGLDAYSNLGSLNYFLGDYDKAAEQ 587

Query: 348 AMLAMKIAPRKEIFLL 363
             +A+ ++P   +  L
Sbjct: 588 FKIALAMSPTNALLQL 603



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 86/272 (31%), Gaps = 26/272 (9%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +     A ++   V  +    N     LL       + +       LE  +Q        
Sbjct: 443 SGEYDQAIQLIDQVLARE-PDNTPAARLL-ALTYHDKNESAKGVRILEDCIQRHPKDFVN 500

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L       G+L  A     K L+I+P       A +    ++  +   +  L Q +K
Sbjct: 501 YKDLARIYLDNGNLEKAITNYKKVLEITPQ----NNAALNNLGISYYF---LGELKQARK 553

Query: 217 NAKEWNRNRAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +   R    L    +L + +   GD   +      +L +   + +  +  A SL + N
Sbjct: 554 YFELATRLIQGLDAYSNLGSLNYFLGDYDKAAEQFKIALAMSPTNALLQLNYADSLRNTN 613

Query: 275 KKR--------KAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEIN 321
            K         KA  + E+I  VNP        +A  Y  L +        R   L    
Sbjct: 614 GKSGLAEESYNKAIALAEEIHFVNPEDNDANITLALSYLALHNPEQAEPYLRKAELNA-- 671

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +  E + +  +  +  G+  +A A     + 
Sbjct: 672 PDYPEVIYVRLRYDIATGNFSEAFATLSELLD 703



 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 25/199 (12%)

Query: 59  FAVSRFFLSCPAMLFHMLH-KRNYDKGYKALYT-GLMSIAAHNIPLARKMHSYVSQQHTF 116
             +S +FL                 +G  A    G ++    +   A +           
Sbjct: 538 LGISYYFLGELKQARKYFELATRLIQGLDAYSNLGSLNYFLGDYDKAAEQFKIALA--MS 595

Query: 117 HNEYLVYLLEVQIAL-AERQYNIAHEKL-EMMLQIPATREF------AVYSLYFESCRIG 168
               L+ L           +  +A E   + +               A  +L      + 
Sbjct: 596 PTNALLQLNYADSLRNTNGKSGLAEESYNKAIALAEEIHFVNPEDNDANITLALSYLALH 655

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           +   A+ Y  KA   +PD P V    ++  +    +S A   L++             +L
Sbjct: 656 NPEQAEPYLRKAELNAPDYPEVIYVRLRYDIATGNFSEAFATLSE-------------LL 702

Query: 229 LIARSLENADKGDMIASYH 247
               S    ++   +A+ H
Sbjct: 703 DAGYSKAILERDPDLAALH 721


>gi|224123642|ref|XP_002319130.1| predicted protein [Populus trichocarpa]
 gi|222857506|gb|EEE95053.1| predicted protein [Populus trichocarpa]
          Length = 923

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 21/257 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           + N   A + HS V  + +      + LL       +       +  E +   P  R   
Sbjct: 15  SGNYKQALE-HSSVVYERSPQRTDNLLLLGAIYYQLQDYDMCIAKNEEALRLEP--RFAE 71

Query: 157 VYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y     +    GD++ A RY   ++++ P+       +   Y+     + A     Q  
Sbjct: 72  CYGNMANAWKEKGDIDLAIRYYLVSIELRPNFADAWSNLASAYMRKGRLNEASQCCRQAL 131

Query: 216 K---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
               +  + + N   L+ A+ L       +  +Y   +E+L++     +A    A   + 
Sbjct: 132 TLNPHLVDAHSNLGNLMKAQGL-------VQEAYSCYLEALRIQPTFAIAWSNLAGLFME 184

Query: 273 QNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVES 327
                +A    ++  K+ P  P+    + N+Y  L        +    +  +   +   +
Sbjct: 185 SGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKAL--GMPQEAIVCYQQAVQARPKYAMA 242

Query: 328 LVIVSKIALEMGSIDQA 344
              ++    E G +D A
Sbjct: 243 FGNLASTYYERGQLDLA 259



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 14/186 (7%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  L++ Q          A+      L+I  T   A  +L       GDLN A +Y  +A
Sbjct: 144 LGNLMKAQ-----GLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEA 198

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P  P     +   Y        AI    Q  +   ++    A+     +    ++G
Sbjct: 199 VKLKPKFPDAYLNLGNVYKALGMPQEAIVCYQQAVQARPKY----AMAFGNLASTYYERG 254

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295
            +  +     +++      + A      +L    +  +A     +   + P HP+    +
Sbjct: 255 QLDLAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPNHPQALTNL 314

Query: 296 ANIYTH 301
            NIY  
Sbjct: 315 GNIYME 320


>gi|219111917|ref|XP_002177710.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410595|gb|EEC50524.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 977

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 8/166 (4%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TRE 154
           A++I  AR+++             + +L    +   E  +N A    E  L+     +R 
Sbjct: 620 ANDIRRARQLYKAA--LDVDPRSSVAWLQLGVMEADEENWNEAETCFETALKFDRRNSRL 677

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
              Y+L       G+   A     +AL  +P    V +A         +   A   L   
Sbjct: 678 LQAYALMETKRPNGNSRKAIGLLERALKANPRDAGVLQAYALYVAELGDVDAARDLL--- 734

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +   E N+  A +  A ++     G++  +     E +  C    
Sbjct: 735 -RRGAEANKRHAPVWQAWAVLETRHGNVQEARSIFQEGIWACAQLT 779



 Score = 43.4 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 89/293 (30%), Gaps = 56/293 (19%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +  + G +  AQ   T AL I P        + +     +++  A  +L     NA 
Sbjct: 458 LAKKELQHGRVEEAQELYTIALQIDPRDGRAYLGMSRCASRRRDFKLAKVWLQTGISNAV 517

Query: 220 EWNR------NRAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
             N         A   + ++L   ++  G +  +    I + K       A +   +  I
Sbjct: 518 SVNENTMQADRGANPFLLQALGCLEENSGRLSEAEALYIAAAKSRPTHAAAWVSLGQLRI 577

Query: 272 SQ-NKKRKAEVIL----EKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN---- 321
            +  +   A  +     E+ W+    P  A++YT     E     ++RA +L +      
Sbjct: 578 RKLGQSANAGRVCFQSAEREWQRASLPPSAHVYTAWAALECEANDIRRARQLYKAALDVD 637

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE----IFLLLA------------ 365
             S  + + +  +  +  + ++A      A+K   R       + L+             
Sbjct: 638 PRSSVAWLQLGVMEADEENWNEAETCFETALKFDRRNSRLLQAYALMETKRPNGNSRKAI 697

Query: 366 --------------------QIEQANSHNTDKILYWTQSALHA--MPDPLWIS 396
                                +  A   + D      +    A     P+W +
Sbjct: 698 GLLERALKANPRDAGVLQAYALYVAELGDVDAARDLLRRGAEANKRHAPVWQA 750


>gi|167042856|gb|ABZ07573.1| putative TPR domain protein [uncultured marine microorganism
           HF4000_ANIW137J11]
          Length = 548

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 19/195 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE--MMLQIPATREFA 156
           +    R M + V Q     +           A  E    +     +  M+L+        
Sbjct: 255 DREARRAMLAEVEQALEEGHPS---------AALEGANRVMRRAQQDGMLLEDERLWAAK 305

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L          + A  Y + AL+I+P    +       Y    EW  A       + 
Sbjct: 306 ARALLRHRQ----YDRAIIYFSMALEIAPQDQQLWYDKGALYRRLGEWGGAARCF--AQA 359

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              ++    A L + ++ E   + +   +       L+L      A +   + L  Q + 
Sbjct: 360 TELDYTYPEAWLALGQARERLQELEP--AAEAFQTGLELGCEPAPAYLGLGRVLAGQGQV 417

Query: 277 RKAEVILEKIWKVNP 291
           R+A   LE+   + P
Sbjct: 418 REALKALEQAIAIEP 432


>gi|125533068|gb|EAY79633.1| hypothetical protein OsI_34777 [Oryza sativa Indica Group]
          Length = 938

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 37/255 (14%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
            + +    +      LL+ Q+   +     A E    +  I   +   ++ L        
Sbjct: 67  RLQKARGANARPAAELLQAQLNAVQEDLKNAREH---LAAIDRDKAQLLHDLSLTRRLAD 123

Query: 169 DLNSAQRYATKALDISP-DAPWVTEAVVQQ-YVLAKEWSR---AITFLNQKKKNAKEWNR 223
           D ++AQ  A +ALD+    +    +  +       ++W+    AI  L + +  A+    
Sbjct: 124 DAHAAQSAAEEALDLERFKSIEREQLAIDLAQTKERDWNARCHAID-LRRAELAAELGTV 182

Query: 224 NRAILLIARS---LENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKK 276
              + L   +          +   +   A E  +L          A+   AK     +  
Sbjct: 183 KDELALAVEATNTARQIADANADKAATLAAEVSRLQSELETKAEEATAIVAKLESEASGL 242

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIA 335
           R                E+ N       E     + RA +L   +  +   +    +   
Sbjct: 243 RA---------------ELQNAEASRKEE-----VGRAEQLLHGLKVDIAYAKRAEADAN 282

Query: 336 LEMGSIDQAHAKAML 350
           L              
Sbjct: 283 LAAQEWKTKAESLQA 297


>gi|148259123|ref|YP_001233250.1| TPR repeat-containing protein [Acidiphilium cryptum JF-5]
 gi|146400804|gb|ABQ29331.1| TPR repeat-containing protein [Acidiphilium cryptum JF-5]
          Length = 733

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 46/305 (15%)

Query: 93  MSIAAHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQI 149
           +++ A N    ARK+    S+     +E L+ L   Q   A+     A E      +   
Sbjct: 26  VALDAGNTRECARKLFQQASELAPSWDEPLIRL--AQSYRADGHVAEAKELYIQASIRNR 83

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-------------AVVQ 196
                   Y +   + +  D + A  Y ++A D++P                    A ++
Sbjct: 84  WRIEPLLAYGIL--ALQSNDPHDAVGYLSRATDLNPTNHQAWHGLALALGALGLQGAALR 141

Query: 197 QYVLAKE-----------WSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIA 244
               A             ++     ++       +E     AI L   +     +G    
Sbjct: 142 AMANAGNLAPDILHYAITYNELRDTVDHDLILQIREPKWTTAIELCLEANAALRRGGAEE 201

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299
           +      ++ +  ++         + ++      AE+ L K     P       ++A   
Sbjct: 202 AIALLETAIDVEPDASDILALLGNAYLANQMPEMAELHLRKALLRAPENIDIANDLAVAL 261

Query: 300 THLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAMLAMKIA 355
                  +    L +          +  S +++++  +   + D    A        K  
Sbjct: 262 GRQYRFGDASDILNKLDI-----PANASSTILLNRATIRASAGDLAGSARDIKAATPKAN 316

Query: 356 PRKEI 360
            R  +
Sbjct: 317 DRSRL 321


>gi|331005451|ref|ZP_08328830.1| TPR repeat containing protein [gamma proteobacterium IMCC1989]
 gi|330420727|gb|EGG95014.1| TPR repeat containing protein [gamma proteobacterium IMCC1989]
          Length = 391

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 73/194 (37%), Gaps = 12/194 (6%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+   A+    K L+  P+ P    A+   Y+   ++ +A   L Q  KN      +   
Sbjct: 40  GEKVEAENLYKKLLNTDPENPNYNFALSSLYISQAQYQKAEVLLEQLLKNG----HHDQG 95

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-----EVI 282
           +    +    +      + +  +E+    ++        A++    N   KA     +VI
Sbjct: 96  IYYNLAYVKLETRQYDEAIYL-LENQSTLEDMPENIALLARAYHHTNNLEKAIELGNQVI 154

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           L+     +PH   A   ++            A +   +++ + +++VI+S IA+E    D
Sbjct: 155 LDT--PDDPHKIGALALSYFDHGEYEEATHWAQKALSLDENNHQAMVILSSIAIEEQRFD 212

Query: 343 QAHAKAMLAMKIAP 356
           +A       +K  P
Sbjct: 213 EAQEHLEQTVKYYP 226


>gi|325283510|ref|YP_004256051.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus
           proteolyticus MRP]
 gi|324315319|gb|ADY26434.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus
           proteolyticus MRP]
          Length = 397

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 35/208 (16%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GDL  A     +A  ++P    +   + +      +   A   L +             
Sbjct: 188 QGDLPGAVHAFQEASRLNPQESVILFNLAETQYAGGDLRAATATLQRAVLAQP----RDG 243

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           I     +   A+ G+   +   A  +++L  NS  A+         +             
Sbjct: 244 INRAYFARLLAEGGNFAVARPQAQLAVQLAPNSAYAA-------GQRGVVS--------- 287

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                       Y     +    +L+RALRL   N    +    + ++ L+ G + +A A
Sbjct: 288 ------------YLAREPQTARAELERALRLAGGN--YPDFSYYLGRLNLDAGDLTRARA 333

Query: 347 KAMLAMKI-APRKEIFLLLAQIEQANSH 373
               A       +  + L   +E++ + 
Sbjct: 334 NFTDAAATGENPEAFYFLGLSLERSGAG 361


>gi|225849177|ref|YP_002729341.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644765|gb|ACN99815.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 1131

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 72/164 (43%), Gaps = 7/164 (4%)

Query: 133 ERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             +Y IA  KL+ + LQ P+     + +L +   +  DL  A+ Y    L I        
Sbjct: 330 AGEYEIAESKLKELYLQNPSNIYVLL-NLGYLYLKKEDLEKAESYYRNVLFIDSKNIDAL 388

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMIASYH 247
           + +   Y+  + +  A+  +  K K    +     + + ++LI+++ E   + ++  +  
Sbjct: 389 KGLKAVYIKTQRYEEALDLIE-KLKALGVYDQDEKKIKELILISKAQEEYKRKNLDLAEK 447

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            A+E L+L  N+ +A    A     +  ++K    + K ++++P
Sbjct: 448 YALEVLELNKNNPVAYPILANVYKDRKDEKKFFQYITKAYQLDP 491


>gi|13172675|gb|AAK14189.1|AF316551_10 Vi biosynthesis protein VexE [Citrobacter freundii]
          Length = 660

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 36/206 (17%)

Query: 124 LLEVQIALAERQY----NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           LL   + L  +QY    ++A                 + SL      +  ++ A+  A +
Sbjct: 114 LLVASVLLKSKQYATVADLAERAWLAFSGNSQIFALHLRSLTLVDKELQAISLARTQAQE 173

Query: 180 A------------LDISPDAPWVTE---AVV---------------QQYVLAKEWSRAIT 209
           A                   P   +   A++                      ++  AI 
Sbjct: 174 APPRGDMIETCLRFLNKSRLPEDHDLARALLPFFVLESQESAGLAVDTQCAVGKYQEAIQ 233

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                     +    R  L +A       +   + +      +L    +++      A +
Sbjct: 234 TGESALGRGLDGAALRRSLGLAYYQSGRSREAKLQAAEHWRHALDFNPDNLRIVTLYADA 293

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEI 295
           LI   +  KA  +L++   +  HP++
Sbjct: 294 LIRTGQNEKAIPLLQQ--SLATHPDL 317


>gi|332709298|ref|ZP_08429260.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L]
 gi|332351844|gb|EGJ31422.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L]
          Length = 485

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 63/176 (35%), Gaps = 10/176 (5%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHS-YVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             +G+  L    ++    +  +A   ++             L   L  Q      +++ A
Sbjct: 130 KAQGHYKLGKAFLAQGKPDRAIACFQNAIERDSSLWVAYYELGDCLIAQ-----GKWDNA 184

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                 +L +   +    Y +     + G +++A     +++++ P+ P     ++Q  +
Sbjct: 185 IACYRKLLDLDPNQAKGHYKIAGIWLKQGMVDTAIAAFRRSIEVDPNFPGAYRELIQLLI 244

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             ++W  AI           ++      + +  +L    KG++  +Y    ++ +L
Sbjct: 245 QQQKWDEAIVSCRAVIATVGDYP--WTYVQLGDAL--VKKGELTEAYTCYQKAAQL 296



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 9/180 (5%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +A      AL + PD P    ++ + Y         I    Q  +   +  + +    
Sbjct: 77  WQAAIASYYHALSLQPDFPEAYWSLAEIYSQLGNKDEEIECWYQTLRLKPQSAKAQGHYK 136

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           + ++     +G    +      +++   +  +A       LI+Q K   A     K+  +
Sbjct: 137 LGKA--FLAQGKPDRAIACFQNAIERDSSLWVAYYELGDCLIAQGKWDNAIACYRKLLDL 194

Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +P     H +IA I+      +T   +    R  E++     +   + ++ ++    D+A
Sbjct: 195 DPNQAKGHYKIAGIWLKQGMVDTA--IAAFRRSIEVDPNFPGAYRELIQLLIQQQKWDEA 252


>gi|296124437|ref|YP_003632215.1| hypothetical protein Plim_4208 [Planctomyces limnophilus DSM 3776]
 gi|296016777|gb|ADG70016.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
           DSM 3776]
          Length = 1001

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 87/276 (31%), Gaps = 18/276 (6%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRI 167
            +  H         +   +I L       A+E+LE + +      R   +  L + +   
Sbjct: 82  ANSPHPLTGPQYAEIALARIDLETGHRARAYERLEALKKLHSEQPRILGL--LAWYAFLN 139

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G L+ A+  A +A+ I  D  W    + + Y       +A        +        +A 
Sbjct: 140 GKLDVAETSAQEAIRIEADELWARRTLAEVYQATGRLKQADEGWRYFVRYYNRVQPEKAE 199

Query: 228 LLIARSLENADKGDMIASYH--------DAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            L+  +  +                     I++LK       A   + + L+ +  K +A
Sbjct: 200 ELLLAAEGSLAYARWHTGKQIFDFVLNTLCIDALKADPLFWQAHELSGRLLLEKYNKPQA 259

Query: 280 EVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +   +    +NP      +          +     + A  + +       +  ++++  L
Sbjct: 260 QQEFQAALAINPRAVTVLLGRAQAAAQDYDWDESNRLAKEVLKNAPGEPLAHTLLARSLL 319

Query: 337 EMGSIDQAHAKAMLAMK---IAPRKEIFLLLAQIEQ 369
                + A  +  LA       P     ++ AQI++
Sbjct: 320 FSNQPEAALEQLQLAKAICPTDPTTTGLIVAAQIQR 355



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 6/154 (3%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            ++  A       +   A E+L++  +   A+I  A+  +      KA   L      N 
Sbjct: 757 AAMLKAKDRRRDEARKLAREALEIDPHCATAAIALAELDLRGEAPEKAIQKLASA-LDNT 815

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAK 347
            P+   +   L       +   AL+   +        + S V +++I      + +  A 
Sbjct: 816 QPDHQLLQRLLPLLIQTKRWDEALKYASLAETTFPSDISSTVALAEILPHFMDLPRYKAV 875

Query: 348 AMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380
                     +  + L  A+I    S   +   Y
Sbjct: 876 LEKLSMYENDESEYRLQRAEIAWKESDLPNVARY 909


>gi|206559899|ref|YP_002230663.1| putative lipoprotein [Burkholderia cenocepacia J2315]
 gi|198035940|emb|CAR51832.1| putative lipoprotein [Burkholderia cenocepacia J2315]
          Length = 286

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 14/163 (8%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL      A  QY+        +L  P         L   +   GD   A +   +
Sbjct: 101 PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLEQ 159

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++P        +    +   + + A   L +      E  +    +L    L     
Sbjct: 160 ATALAPTDAATLSDLAYSKMRDGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLAT 215

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           G    +    ++  KL          A +  I  ++ + A  +
Sbjct: 216 GHAKDARRL-MDQQKLSP--------AVRGQIRDDETKVAAAM 249


>gi|157812768|gb|ABV81129.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Cypridopsis vidua]
          Length = 289

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +P A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVPEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYCKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLQEALAHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+ + P+ P     +        +   A    N   +       + A  L   +    
Sbjct: 10  RRAIALQPNFPDAYCNLANALKEKGQVPEAEDCYNTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +     ++L++      A    A  L  Q K ++A    ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYCKALEVFPEFAAAHSNLASVLQQQGKLQEALAHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 53/177 (29%), Gaps = 14/177 (7%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL + P        +            A     +  +   E+    A      +     +
Sbjct: 46  ALRLCPSHADSLNNLANIKREQGYIEEATRLYCKALEVFPEF----AAAHSNLASVLQQQ 101

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
           G +  +     E++++      A      +L      + A     +  ++NP     H  
Sbjct: 102 GKLQEALAHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 161

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS---KIALEMGSIDQAHAKA 348
           +A+I  H  S N    ++      ++  +  ++   ++   +I  +    D    + 
Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWSDYDARMKRL 216


>gi|150865560|ref|XP_001384827.2| hypothetical protein PICST_46600 [Scheffersomyces stipitis CBS
           6054]
 gi|149386816|gb|ABN66798.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 637

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 25/195 (12%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDL 170
           Q    NE  V  L  Q+ L + +   A   +   +           + + +  + +  DL
Sbjct: 243 QRLEQNEPSVISLIAQVLLLKDEEIQAVTTMSEGIARDRRDADLLLLQAEFCMNKKRNDL 302

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAIL 228
             A   A +A+  +P        +V+ Y    ++  A+  LN      + +++   R + 
Sbjct: 303 --ALDLAKQAVKSAPSDFKSWSMLVKVYTKLGDFENALLTLNSCPMNSHKEKYTLRRVVP 360

Query: 229 LIARSLEN---------ADKGDMIASYHDAIESLKLCDNSI--MASICA---AKSLISQN 274
           L   + +           +    ++S   A E   L        A+      AK+     
Sbjct: 361 LRGGNEDLHLPSPVDVTLEDVSYLSSQDVANEQRNLDPQLANLPAANLKSTFAKAYDLLT 420

Query: 275 KKRKAEVILEKIWKV 289
                  +++  W+ 
Sbjct: 421 DI-----VVKTGWQT 430


>gi|78358810|ref|YP_390259.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78221215|gb|ABB40564.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 208

 Score = 46.1 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 14/163 (8%)

Query: 129 IALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             L++R +  A +     ++           +  +  +    GDL+   RY  +A     
Sbjct: 35  ALLSKRDWAAAEQSFRECVRNSPRFAEAFVQLGGICLQ---RGDLDGCMRYNEEAAQCRA 91

Query: 186 D--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
               PW   A V       E   AI  L +  K   ++ + +A L  A  +      D  
Sbjct: 92  KFPVPWANIAFVHLQ--RGEPEPAIAALKKALKWDPDFVQAKATLATAYFM----MEDYD 145

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  + ++   +   A    A +   + +  KA    ++ 
Sbjct: 146 MVLDVCKQIIQKEPSFAPAYNNMALAYFEKGEFAKAVQYADEA 188


>gi|223938612|ref|ZP_03630503.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223892731|gb|EEF59201.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 745

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 9/179 (5%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAA 267
           T    KK        N A+ L +R+L    +G  +      +  +LK+    + A I  A
Sbjct: 183 TTEELKKMERTRLRANHALELTSRALAENHRGKALVESEPFLASALKIDPEFMPALIVMA 242

Query: 268 KSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           +  + Q +  +A  I +K         + H  +  IY  +  E  + +    L+  +++ 
Sbjct: 243 QIKVWQGQTEEATAIAKKAVAIDQDFASAHETLGLIYL-MKGEPFLAR-DEFLKAIDLDP 300

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380
           ++ ES   +S I  +     ++      A  + P        LA+I  +     + +L 
Sbjct: 301 DNSESYQQLSVIYGQREKWVESVKCLEKAKALEPFNGTVRAELARIHASQGERENAVLE 359


>gi|152980764|ref|YP_001354355.1| tetratricopeptide repeat protein [Janthinobacterium sp. Marseille]
 gi|151280841|gb|ABR89251.1| N-acetylglucosaminyl transferase [Janthinobacterium sp. Marseille]
          Length = 391

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 85/236 (36%), Gaps = 17/236 (7%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L  P      +  A Y L  +    G L+ A+    + +D    A  
Sbjct: 84  GETERAIRVHQNLLARPDLPLEHKVHAQYELGQDYLNAGLLDRAEETFNQLVDTQYGAQ- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
              A+++ Y   KEW RAI   +  +++     +   A      + +        A+   
Sbjct: 143 ARRALLEIYQREKEWERAIQAAHALQESGAGGRQKEIAQFYCELAQDELVHTHPDAAITL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSE 305
             ++L     S+ A+I    + ++Q     A       W+   H   P +A +   L+  
Sbjct: 203 LEKALAADRKSVRATILLGDAQLAQGDTESAL----LTWRRVEHQSVPHVALVAQRLMDG 258

Query: 306 -NTVGKLKRALRLEEINKESVESLVIVS---KIALEMGSIDQAHAKAMLAMKIAPR 357
              VG+ +  + L +       S+ ++    K  LE+  +D A+      ++  P 
Sbjct: 259 YRAVGRAQEGVNLLKFYLAEASSIDLLEVVFKAVLELEGVDAANQMVSDELRRTPT 314


>gi|88812108|ref|ZP_01127360.1| hypothetical protein NB231_03320 [Nitrococcus mobilis Nb-231]
 gi|88790612|gb|EAR21727.1| hypothetical protein NB231_03320 [Nitrococcus mobilis Nb-231]
          Length = 755

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 53/168 (31%), Gaps = 19/168 (11%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA----------------SYHDAIE 251
           +  +   +  A +    +A +    + +  +  D  A                +      
Sbjct: 570 LADIPAARVPAADREVLQAAIADYMAAQTFNADDPAAHVNLGNFYTVQGKKALAERSYRL 629

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSENTV 308
           ++ L  + + A +  A      ++  K E +L    +  P   ++  +     +  E+  
Sbjct: 630 AIDLDPSWVPAYVNLADLFRRMDQDSKGEQVLRSGIRRLPQAADLRYSLGLLLVRQEDLP 689

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             L    +  ++   +     + +      G + +A A    A++ AP
Sbjct: 690 AALVSLRQAADLAPANAHYSYVYAMALQNAGQLREARAVVDEALEQAP 737


>gi|118580891|ref|YP_902141.1| hypothetical protein Ppro_2478 [Pelobacter propionicus DSM 2379]
 gi|118503601|gb|ABL00084.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 884

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 54/176 (30%), Gaps = 14/176 (7%)

Query: 98  HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPAT 152
            N+  + + H+       +    N   V  L  Q AL +   +   A  +    L    T
Sbjct: 706 GNLLESARDHNQAMAMYDEALKKNPNYVPALFAQGALLDSTGKKKEAVARYRATLAKSET 765

Query: 153 REFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
              A+ +L Y  +   G    A R A  A  + P    + + +    +  +    A   L
Sbjct: 766 YVPALNNLAYLCASGFGSKEEALRLAVTAFKLEPGNAGIMDTLGFALLKNRRLDDAAKVL 825

Query: 212 NQK---KKNAKEWNRNRAILLI-----ARSLENADKGDMIASYHDAIESLKLCDNS 259
            +             + A++       AR+     K     ++ DA  +  L    
Sbjct: 826 ERASTLLPTNPTVTYHLALVYAERGDRARATTLLQKSLSQGAFADAPAARSLLAGL 881



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 98/306 (32%), Gaps = 42/306 (13%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
            KGY     G  +     +  A K+                 +L     +       A  
Sbjct: 402 KKGYFYFSRGKNAEGESELATAVKVAPDALN---------SRMLLASYYMRSGSAPKALN 452

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            L+  L           S+          + A     KA  + P  P   + +   Y  +
Sbjct: 453 VLKGGLSGKKGDALLYNSIASVHLSQNRPDLALASIQKAKQVDPAFPASYQNLATYYAAS 512

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN--------------ADKGDMIASYH 247
            ++  AI   +   +   +    RA+L +A   E                D G   A   
Sbjct: 513 GKYDNAIAEYSALLR--VDPRNLRAMLGLAALYEIKGNDREALAFYDRATDTGQPAAFLT 570

Query: 248 DAI---------ESLKLCDNS-------IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            A          +++K+ D         + A     + L+ + + ++A  + +++  V P
Sbjct: 571 KATYLAKKRETGKAIKVVDELLKKDSRNLAALEMKGRLLMVEKEYKQAVKVFDEVEAVKP 630

Query: 292 HPEIA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              +A  I  ++  ++T   + +A    +    S    ++++ +   +G  ++A A+   
Sbjct: 631 DAGVALKIGAYVAMKDTSKAVSQARVFIDKYPRSARGYLVLASVHESLGDRNRAMAEVRN 690

Query: 351 AMKIAP 356
            +++ P
Sbjct: 691 GLRVEP 696



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 78/239 (32%), Gaps = 14/239 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              + A E    +L +  +   A Y         GDL  A   A   +   P        
Sbjct: 208 GNRDRALEIYTRILSMDRSETLAAYKSGLIQIEKGDLPKADGIADSMIKEFPKRAEGHRL 267

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                   K+++ A+T L    K A        + L        +      S     + L
Sbjct: 268 KGLVLYQRKQYAEAMTSLQNSIKIAPTLEAYYFMGLCQYGRGELES-----SLSQFRQVL 322

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----PHPEIANIY-THLLSENT 307
               +S  A +  A  L++Q +   A   ++K+ + +      H  + N Y    + +  
Sbjct: 323 DRVPSSRQARLMTATVLLAQKRVDDAIGEIKKVLQADDNDAVAHNLLGNAYMAKGMFDEG 382

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           + +L RA     I+   V++ +         G   +  ++   A+K+AP      +L  
Sbjct: 383 MRELNRA---TSIDPRIVDAYLKKGYFYFSRGKNAEGESELATAVKVAPDALNSRMLLA 438



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 96/289 (33%), Gaps = 13/289 (4%)

Query: 105 KMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYF 162
           K    V +     +  L  L ++ ++ + E++Y  A +  + +    P          Y 
Sbjct: 583 KAIKVVDELLKKDSRNLAALEMKGRLLMVEKEYKQAVKVFDEVEAVKPDAGVALKIGAYV 642

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
               + D + A   A   +D  P +      +   +    + +RA+  +    +   E  
Sbjct: 643 ---AMKDTSKAVSQARVFIDKYPRSARGYLVLASVHESLGDRNRAMAEVRNGLR--VEPG 697

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A++ +   LE+A   +   + +D  E+LK   N + A       L S  KK++A   
Sbjct: 698 NGEALVRLGNLLESARDHNQAMAMYD--EALKKNPNYVPALFAQGALLDSTGKKKEAVAR 755

Query: 283 LEKIWKVNPH--PEIAN-IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
                  +    P + N  Y       +    L+ A+   ++   +   +  +    L+ 
Sbjct: 756 YRATLAKSETYVPALNNLAYLCASGFGSKEEALRLAVTAFKLEPGNAGIMDTLGFALLKN 815

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
             +D A      A  + P          +  A   +  +     Q +L 
Sbjct: 816 RRLDDAAKVLERASTLLPTNPTVTYHLALVYAERGDRARATTLLQKSLS 864


>gi|332860993|ref|XP_521123.3| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit [Pan
           troglodytes]
          Length = 1032

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 73/227 (32%), Gaps = 7/227 (3%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+       N  +V+     +   +   ++A +     +++      A  +L   
Sbjct: 286 RAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANA 345

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A+     AL + P        +            A+    +  +   E+  
Sbjct: 346 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-- 403

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  +     E++++      A      +L      + A    
Sbjct: 404 --AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCY 461

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE-INKESVESLV 329
            +  ++N  P  A+ +++L S +     +R  +L      +  E+ +
Sbjct: 462 TRAIQIN--PAFADAHSNLASIHKTDYDERXEKLVSMWADQXRENRL 506


>gi|196249188|ref|ZP_03147887.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
 gi|196211417|gb|EDY06177.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
          Length = 1386

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 79/253 (31%), Gaps = 17/253 (6%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE 163
           +    + Q        L + L  +IA    +Y  A       LQ  P   E   Y+    
Sbjct: 546 RAEQALKQAKGKRQSPLYHYLRGRIAFFMSRYEEAVRHFRASLQLDPDQPEVWSYTALAS 605

Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +   G        +  A+ + P          ++  +      + A  + +    +    
Sbjct: 606 AYA-GYTERGLVCSRIAVHLHPGDLFIETNHGLLLFHAKRL--AEARKWFD----HLVRR 658

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R  A L   R+  + + G    +      +  L        +  A       K+ +A+ 
Sbjct: 659 ERRDAHLWYERARCDLELGHRRKAERGFRVAKALDPREPYPYVMLADLYDDDGKREQAKA 718

Query: 282 ILEKIWKVNPHPEIANIYTHL----LSENTVGKLKR-ALRLEEINKESVESLVIVSKIAL 336
           +L++         +A +Y  L    + E  V +      +    +   V + + ++   +
Sbjct: 719 VLKEGLAAAE--RLAPLYVRLGDAYMDEGEVEQAASCYEKAIRHDDNDVFAHLGLASALM 776

Query: 337 EMGSIDQAHAKAM 349
           E G+++ A    M
Sbjct: 777 ERGNVEAAKRHVM 789



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 84/296 (28%), Gaps = 52/296 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +    R+    V ++     E L  L        + E +   A    E  ++      FA
Sbjct: 708 DDDGKREQAKAVLKEGLAAAERLAPLYVRLGDAYMDEGEVEQAASCYEKAIRHDDNDVFA 767

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE----WSRAITFLN 212
              L       G++ +A+R+                 V++Q     +    W  A  +L 
Sbjct: 768 HLGLASALMERGNVEAAKRH-----------------VMEQRTRFADDSEYWLNAGKWLL 810

Query: 213 QKKKNAKEWNRNRAILLIARSLENAD----------------KGDMIASYHDAIESLKLC 256
                 +   +  A+  +   L  A+                            + +   
Sbjct: 811 VHGVANEAEGKQLALSWLENGLRLAEFDIEEVYEFYIDQLTTPALRERGRTFLEQLIAAR 870

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLK 312
                A          Q++  KA  +  K      HP     +A + + L         +
Sbjct: 871 PGLAPAHSALGVLYERQSRPSKAMAVYRKA-AAMGHPLSLYRLAELCSALGRYEEAK--Q 927

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
                 + +         ++ +    G+ +Q HA  + A+++AP      L A IE
Sbjct: 928 HYESCLDADPSFAFCHFRLAALYEMEGNEEQQHAHLLEAVRLAP------LRADIE 977


>gi|115376430|ref|ZP_01463666.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310823257|ref|YP_003955615.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366562|gb|EAU65561.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309396329|gb|ADO73788.1| Tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
          Length = 786

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 67/209 (32%), Gaps = 15/209 (7%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE- 141
           KG + L  G    AA  +  A KM S  +Q H       V L +  +     +   A   
Sbjct: 569 KGRRLLAEGQPDAAAEEMRKAIKMDSSRAQFH-------VELAKALMGKQGGEKEAAEAL 621

Query: 142 --KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQY 198
              L  M   P  +   +        R G L+ A     +A+       P    A+   Y
Sbjct: 622 TTALRTMGDSP--KLVVMLG--NAYRRQGKLDDAITQYQRAVKDPKAKNPEARLAMGGIY 677

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
               EW +A   L +  +     +   A+ L         KGD   +     ++L   +N
Sbjct: 678 RERSEWEKAQEQLEKASQEFVGQSDRAALALTELGRVFQGKGDATKAEEAYQKALNADEN 737

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIW 287
              A    A +L    K+      L + +
Sbjct: 738 YSPAYYFYASALSKDRKQGDKVRALAQEY 766



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 117/341 (34%), Gaps = 44/341 (12%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL+ + A ++  AR   +    Q    ++  +Y     +     Q  +A +K +  L
Sbjct: 398 LTLGLVQMNAGDLEHAR--DNLEKAQSLSPDDPRIYASLGAVYRRLGQDAVAWQKYDFAL 455

Query: 148 --QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-------DAPWVTEAVVQQY 198
             +           L        +   A     K L   P        A  +  +++   
Sbjct: 456 RYEKDHPESLLGKGLLILEQDEPNFEMASAMLKKLLVADPPPSPRQLAAAQLARSLLVSR 515

Query: 199 VLAK--------------------EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           V A                     +  +A   + + +++    ++    LL+ +      
Sbjct: 516 VSASMATLKPDVQAKLSEATGVPVDKEKARADMLKAEQDGFALDKANPELLLIKGRRLLA 575

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLI-SQNKKRKAEVILEKIWKV-NPHPE-- 294
           +G   A+  +  +++K+  +     +  AK+L+  Q  +++A   L    +     P+  
Sbjct: 576 EGQPDAAAEEMRKAIKMDSSRAQFHVELAKALMGKQGGEKEAAEALTTALRTMGDSPKLV 635

Query: 295 --IANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             + N Y      ++ + + +RA++  +   ++ E+ + +  I  E    ++A  +   A
Sbjct: 636 VMLGNAYRRQGKLDDAITQYQRAVK--DPKAKNPEARLAMGGIYRERSEWEKAQEQLEKA 693

Query: 352 MKI--APRKEIFLLLAQIEQA--NSHNTDKILYWTQSALHA 388
            +          L L ++ +      +  K     Q AL+A
Sbjct: 694 SQEFVGQSDRAALALTELGRVFQGKGDATKAEEAYQKALNA 734


>gi|293414612|ref|ZP_06657261.1| yciM protein [Escherichia coli B185]
 gi|291434670|gb|EFF07643.1| yciM protein [Escherichia coli B185]
          Length = 389

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A      A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGNEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|262305027|gb|ACY45106.1| acetylglucosaminyl-transferase [Polyxenus fasciculatus]
          Length = 290

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVTDAEDCYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFSEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVTDAEDCYNTALRLCPTHADSLNNL--ANIKREQGFSEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200


>gi|167841713|ref|ZP_02468397.1| TPR repeat protein [Burkholderia thailandensis MSMB43]
          Length = 546

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 49/178 (27%), Gaps = 10/178 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +  LAR   +   +    H   L        A    ++  A +     L +       V 
Sbjct: 80  DDALARCERALAIEPR--HARALAN--RGNAASHLGRHGDAVDSYARALDVEP-DSVGVL 134

Query: 159 SLYFESCRIGDLNSAQRYA-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             Y  +    D +     A  +AL ++P  P  +    +  +    +  A+  L +    
Sbjct: 135 CNYASALMRVDRHRDAHRACDRALALAPHDPHASLTRARVRLETHRYDEALDDLTRAIAV 194

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           A        +    R            +     +++ +  +   A    A   +S   
Sbjct: 195 AP----REKLAHFHRGNALRALRRHEEARQAYADAIDIDPDYAPAHCMRAFLCLSIGD 248



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 65/234 (27%), Gaps = 11/234 (4%)

Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
              A  ++  A +     +   P +     +  + +    + D   A      A+  SP 
Sbjct: 4   ALRALGRFGDAADSYGHALALTPGSADVLFLRGVAY--LDLHDPERALADFNAAIAASPG 61

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                            +  A+    +    A E    RA+     +  +   G    + 
Sbjct: 62  FVDAIFNSSIALDQLGRYDDALARCERAL--AIEPRHARALANRGNAASHL--GRHGDAV 117

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLL 303
                +L +  +S+      A +L+  ++ R A    ++   + PH     +      L 
Sbjct: 118 DSYARALDVEPDSVGVLCNYASALMRVDRHRDAHRACDRALALAPHDPHASLTRARVRLE 177

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +      L    R   +      +          +   ++A      A+ I P 
Sbjct: 178 THRYDEALDDLTRAIAVAPREKLAHFHRGNALRALRRHEEARQAYADAIDIDPD 231



 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 61/186 (32%), Gaps = 9/186 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           ++G  + A     +AL I P                     A+    +      +     
Sbjct: 75  QLGRYDDALARCERALAIEPRHARALANRGNAASHLGRHGDAVDSYARALDVEPDS---- 130

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             +L   +           ++     +L L  +   AS+  A+  +  ++  +A   L +
Sbjct: 131 VGVLCNYASALMRVDRHRDAHRACDRALALAPHDPHASLTRARVRLETHRYDEALDDLTR 190

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSI 341
              V P  ++A+ +    +   + + + A +       I+ +   +  + + + L +G  
Sbjct: 191 AIAVAPREKLAH-FHRGNALRALRRHEEARQAYADAIDIDPDYAPAHCMRAFLCLSIGDF 249

Query: 342 DQAHAK 347
           +   A+
Sbjct: 250 EAGWAE 255


>gi|89057722|ref|YP_512176.1| tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
 gi|88866276|gb|ABD57152.1| Tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
          Length = 824

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 101/309 (32%), Gaps = 33/309 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
               AR++    ++Q+       V L  + +  AL + +   A  +++  L+I  T    
Sbjct: 149 EDEPARRLVVDAARQYLDEAPENVSLRRIVIDAALRDGELEAALTEVDAALEIAPTDRQL 208

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--K 214
                    ++   +  +      +D+ P+   +   +++ Y L  +   A +FL     
Sbjct: 209 YDGKLQILAQLERADEIEALLENMVDLFPEDEDLPGTLLRFYALQGDMEAAQSFLTNIVA 268

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             ++    R+    L+  +L+    G  +A     I       +        A     Q 
Sbjct: 269 TTDSDLQRRSARSALVQLALQVDGPGAALAELDRIIAETDDDLSFRT---LRAGIRFDQG 325

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--------------- 319
           ++ +A   LE + +                E  V ++  A  L                 
Sbjct: 326 EQSEAIADLETLLEGQ----------ESGEEVNVIRVTLARMLTTTGNVVGARALVEEIL 375

Query: 320 -INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             +    ++L + +   +E  + D+A A    A+   P   + LLL+    A + +    
Sbjct: 376 VADPSQADALKMKAAWLIEEDNGDEAIALLRTALDQDPNDSVALLLSADAHARNGDHSLA 435

Query: 379 LYWTQSALH 387
             +   A+ 
Sbjct: 436 REFLSLAVD 444



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 270 LISQNKKRKAEVILEKIWKVN-PHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVE 326
           LI +    +A V    +++ N  H +    +  L   +++  G   + LRL E     VE
Sbjct: 39  LIEEGDFERAGVEFRNVFQNNGQHRDARARFAQLLRETDDMQGSYSQYLRLVEQYPGDVE 98

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             + ++++A+++ + ++A    + A ++A
Sbjct: 99  GRIALAEMAIDLQNWEEARRHGIRARELA 127


>gi|86156666|ref|YP_463451.1| hypothetical protein Adeh_0237 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85773177|gb|ABC80014.1| tetratricopeptide protein [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 1256

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 94/286 (32%), Gaps = 18/286 (6%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L   L +    ++   R                   L   + A  +  +    +++E  L
Sbjct: 327 LARVLAARQGGDVQERRAAAEARRAALLAPGWADAQL---EAAALDEDHGRRRQRIEAAL 383

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                   A+ +L  E    G   +A R   +A+  +P        +      A     A
Sbjct: 384 AAAPEDPRALRALGQEELDQGRPQAAARLLERAVRAAPGWAAPRVELADALSRAG--LEA 441

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              L  +   A       A+   ARS     + +  A+    + +L+  D    A++  A
Sbjct: 442 RGALLAEATAAAFATVPSAVRAAARSARRLGRTEEAAARSRTLVALRFDDAQTRAAL--A 499

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEI 320
           + L  +     A+ +LE+  +++P    +++Y  L   + +    R             +
Sbjct: 500 QILADRGDVAGAQALLEEALRLDP----SDVYQRLRLADLLAASGRGEEAERAYAAALAL 555

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
             +  ++     +  L  G +  A A    A+++ P+     LL +
Sbjct: 556 APDEPDAWERRGRARLSQGRVKDAQADLQRALELRPQSPELKLLVR 601



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 12/188 (6%)

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            +A ++   L ++  R    +      A E  R     L A   E  D+G   A+     
Sbjct: 359 ADAQLEAAALDEDHGRRRQRIEAALAAAPEDPR----ALRALGQEELDQGRPQAAARLLE 414

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENT 307
            +++         +  A +L     + +  ++ E         P    A   +      T
Sbjct: 415 RAVRAAPGWAAPRVELADALSRAGLEARGALLAEATAAAFATVPSAVRAAARSARRLGRT 474

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFL 362
                R+  L  +  +  ++   +++I  + G +  A A    A+++ P     R  +  
Sbjct: 475 EEAAARSRTLVALRFDDAQTRAALAQILADRGDVAGAQALLEEALRLDPSDVYQRLRLAD 534

Query: 363 LLAQIEQA 370
           LLA   + 
Sbjct: 535 LLAASGRG 542


>gi|296125573|ref|YP_003632825.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296017389|gb|ADG70626.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 631

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 24/199 (12%)

Query: 71  MLFHMLHKR---NYDKGY-----------KAL-YTGLMSIAAHNIPLA-RKMHSYVSQQH 114
            L     +R      KGY           +AL Y GL+++      +A   +   V +  
Sbjct: 163 TLGRFYMERNLPRLAKGYYERVLSLEESDEALFYVGLIALNEGFQSVAYDTLSKLVRRSK 222

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
             + +    +L   I +     + A E     L    T+  ++  L     ++ D +  +
Sbjct: 223 GEYADKAATIL-GDIYVISGDTDSAIEMYLKSLVNSDTKPDSIRRLVKIYEQVEDYDGIK 281

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           +   + L+ +P+      A+ + Y     + RAI     K    K++           ++
Sbjct: 282 KVYEQILEQNPNDIDTILALGELYEKENAYDRAIK-YYLKLTKMKDYTN------TYEAI 334

Query: 235 ENADKGDMIASYHDAIESL 253
                     S     E+ 
Sbjct: 335 GLLANSYYKGSMLKEAEAN 353


>gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
 gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 279

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 4/151 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A   Y  A +     +++      A     F   +      A +   KA+ I P   
Sbjct: 68  AYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKPKYA 127

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                    Y     + +A+    +  +N  ++    A     R +          + +D
Sbjct: 128 QAFHGQGIAYTKLGNYEKALENFRKAIQNNPQY----AEAFNGRGIAYIQMEKYRQALND 183

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             +++K   N I A      +   Q    KA
Sbjct: 184 FDKAIKFNSNYIEAIYNKGIAYKQQGNSEKA 214



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 4/152 (2%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +Y  A +  E  ++I      A +       ++G+   A     KA+  +P         
Sbjct: 108 KYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQYAEAFNGR 167

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              Y+  +++ +A+   ++  K    +N N    +  + +    +G+   +     + ++
Sbjct: 168 GIAYIQMEKYRQALNDFDKAIK----FNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQVIQ 223

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  + + A I          K +KA    EK 
Sbjct: 224 IDSDYLEAYIERGYVYGELGKYKKAIEDCEKA 255


>gi|158295621|ref|XP_316319.4| AGAP006254-PA [Anopheles gambiae str. PEST]
 gi|157016124|gb|EAA10760.4| AGAP006254-PA [Anopheles gambiae str. PEST]
          Length = 1120

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 102/303 (33%), Gaps = 31/303 (10%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122
             L +  H          GY  L   L++    ++  A + +    Q           L 
Sbjct: 197 EALENYRHAVRLKPDFIDGYINLAAALVAAR--DMEQAVQAYVTALQYNPDLYCVRSDLG 254

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179
            LL+        + + A       L+   TR     A  +L       G++  A  +  K
Sbjct: 255 NLLKA-----LGRLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 306

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + P+       +      A+ + RA+    +    +     N A++    +    ++
Sbjct: 307 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 362

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           G +  +      ++ L  N   A    A +L  + + ++AE       ++ P H +  N 
Sbjct: 363 GLIDLAIDTYRRAIDLQHNFPDAYCNLANALKEKGQVKEAEESYNIALRLCPNHADSLNN 422

Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++  E        +L     LE    E   +   ++ +  + G +++A      A++I
Sbjct: 423 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALLHYKEAIRI 480

Query: 355 APR 357
            P 
Sbjct: 481 QPT 483



 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 397 GQVKEAEESYNIALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 453

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ + A+    +  +
Sbjct: 454 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 513

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 514 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 563



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     +A+D+  + P     +  
Sbjct: 332 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIDLQHNFPDAYCNLAN 391

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   A    N   +       N A  L   +    ++G +  +    +++L++ 
Sbjct: 392 ALKEKGQVKEAEESYNIALRLCP----NHADSLNNLANIKREQGYIEEATRLYLKALEVF 447

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K  +A +  ++  ++ P    A+ Y+++ +     ++  G L
Sbjct: 448 PEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FADAYSNMGNTLKEMQDVAGAL 505

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G+I +A      A+K+ P 
Sbjct: 506 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 551


>gi|307193762|gb|EFN76443.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Harpegnathos saltator]
          Length = 1180

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 108/372 (29%), Gaps = 70/372 (18%)

Query: 67  SCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNE 119
             P  L +  H          GY  L   L++  A ++  A + +    Q          
Sbjct: 146 QLPEALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRS 203

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRY 176
            L  LL+        + + A       L+   TR     A  +L       G++  A  +
Sbjct: 204 DLGNLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHH 255

Query: 177 ATKALDISPDAPWV----TEAVVQQY---VLAKEWS-------RAITFLNQKKKNAKEWN 222
             KA+ + P+           + +         +W         A        +      
Sbjct: 256 FEKAVALDPNFLDAYINLGNVLKEARIFDSRRGDWDVAGVASADAEGQCLLGYRCLIPSR 315

Query: 223 RNRAILLIARSLE---NADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQN--- 274
              ++   ++  +   +A   D   +    + +L L  N+  A +    A     Q    
Sbjct: 316 GWESVSSGSQGSDVDNHARTIDCYRAVAAYLRALNLSPNN--AVVHGNLACVYYEQGVFG 373

Query: 275 ----KKRKAEV----------ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
               +  KA              +K W          +    L +  +   +RA+ L   
Sbjct: 374 NRGFRTLKALKDSAHKIEEKGSRKKTWVE-------KLMLLELIDLAIDTYRRAIEL--- 423

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
                ++   ++    E G + +A      A+++ P   +    LA I++      +   
Sbjct: 424 QPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLANIKREQGFIEEATR 483

Query: 380 YWTQSALHAMPD 391
            +   AL   P+
Sbjct: 484 LYL-KALEVFPE 494



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 442 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPEF-AAA 498

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 499 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 558

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 559 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 608



 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +         A  L   +    
Sbjct: 418 RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 473

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 474 EQGFIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 531

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 532 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 591

Query: 353 KIAPR 357
           K+ P 
Sbjct: 592 KLKPD 596


>gi|182412280|ref|YP_001817346.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177839494|gb|ACB73746.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 1103

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 62/212 (29%), Gaps = 23/212 (10%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD   A   A   L   P        +    + A     A   L   +  A    R 
Sbjct: 458 LHAGDYARALELARATLAKDPKDVDALVTMADLALEACNRPLATKLLQTLRGIAPLDPRL 517

Query: 225 RAIL---------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +++                L+  + + A K D   +     ++L+L      A     + 
Sbjct: 518 QSLTADLTRGSYTPKLPQRLLNTARDLATKRDWKRAGVFVAKALELEPGLRGAYALFGRI 577

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-----ALRLEEINKES 324
                  ++A   L +  K     + A+ +  L    + G+  R       +   +   +
Sbjct: 578 HSELGNYQEAADTLLQALKQE---DTADAWMGLGHILSKGRQNREAADAFRKALVLAPVA 634

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + ++  V+  A+ +G          +  +  P
Sbjct: 635 IATIHAVADAAITIGDWKLHSDAVGMLRERDP 666



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 29/221 (13%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----I 149
            + A +   A ++      +     + LV +    +AL      +A + L+ +       
Sbjct: 457 HLHAGDYARALELARATLAKDPKDVDALVTM--ADLALEACNRPLATKLLQTLRGIAPLD 514

Query: 150 PATREF---AVYSLYFESCRIGDLNSAQRYA------------TKALDISPDAPWVTEAV 194
           P  +          Y        LN+A+  A             KAL++ P         
Sbjct: 515 PRLQSLTADLTRGSYTPKLPQRLLNTARDLATKRDWKRAGVFVAKALELEPGLRGAYALF 574

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            + +     +  A   L Q  K     +    +  I              +     ++L 
Sbjct: 575 GRIHSELGNYQEAADTLLQALKQEDTADAWMGLGHILS-----KGRQNREAADAFRKALV 629

Query: 255 LCDNSIMASICAAKSLISQNK---KRKAEVILEKIWKVNPH 292
           L   +I      A + I+         A  +L +   + PH
Sbjct: 630 LAPVAIATIHAVADAAITIGDWKLHSDAVGMLRERDPLAPH 670


>gi|209550916|ref|YP_002282833.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536672|gb|ACI56607.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 622

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 22/205 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++PL R +           +    +             + A    E  L +      A +
Sbjct: 386 DVPLRRILEMSARALALDPDLPEAHASHGLALHQSGFDDRAAAAFERALSLDPNLFEANF 445

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKEWSR-----A 207
                    G+   + +Y T+A  I PD              + + +  + W+R     A
Sbjct: 446 HYARFFFMHGNFAESVQYFTRAAAIRPDDYVSPIHLMSAYRSLGRVLDTENWARLGLLRA 505

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              LN   +N+   +R         +L  A  GD   +   A  ++ +  + I+A    A
Sbjct: 506 ERALNLNPENSGPAHR--------GALALAHMGDTKRARDWAARAIAIDPDDIVAQYNLA 557

Query: 268 KSLISQNKKRKAEVILEKIWKVNPH 292
                     +A  +LE   ++ PH
Sbjct: 558 CVYSVLGDIDQAIDLLE---RLLPH 579



 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 71/221 (32%), Gaps = 25/221 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+R   KA+++ PD       +       ++W+     L +  + +         L  A 
Sbjct: 351 ARRMFCKAVELDPDYARAYAGIADCDAAIRDWAPDDVPLRRILEMSARALALDPDLPEAH 410

Query: 233 S---LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +   L     G    +      +L L  N   A+   A+         ++     +   +
Sbjct: 411 ASHGLALHQSGFDDRAAAAFERALSLDPNLFEANFHYARFFFMHGNFAESVQYFTRAAAI 470

Query: 290 NP-------HPEIANIYT---HLLSENTVGKLK--RALRLEEINKESVESLVIVSKIALE 337
            P       H  + + Y     +L      +L   RA R   +N E+       +     
Sbjct: 471 RPDDYVSPIH--LMSAYRSLGRVLDTENWARLGLLRAERALNLNPENSGPAHRGALALAH 528

Query: 338 MGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370
           MG   +A   A  A+ I P           ++ +L  I+QA
Sbjct: 529 MGDTKRARDWAARAIAIDPDDIVAQYNLACVYSVLGDIDQA 569



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 79/281 (28%), Gaps = 28/281 (9%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-PWV 190
           A   +  A            T  FA+      +              KA+   P A    
Sbjct: 275 ANGDHLWAERY-----DRDLTDIFAIQDEITHAIVGQLKVRLLPEEKKAIATEPTANVEA 329

Query: 191 TEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
               ++   L+  W++     A     +  +   ++ R  A +    +       D +  
Sbjct: 330 YTYYLRGRQLSHTWTKSYLQLARRMFCKAVELDPDYARAYAGIADCDAAIRDWAPDDVPL 389

Query: 246 Y---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---Y 299
                 +  +L L  +   A      +L       +A    E+   ++  P +      Y
Sbjct: 390 RRILEMSARALALDPDLPEAHASHGLALHQSGFDDRAAAAFERALSLD--PNLFEANFHY 447

Query: 300 THL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS----IDQAHA---KAML 350
                +  N    ++   R   I  +   S + +      +G      + A     +A  
Sbjct: 448 ARFFFMHGNFAESVQYFTRAAAIRPDDYVSPIHLMSAYRSLGRVLDTENWARLGLLRAER 507

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           A+ + P          +  A+  +T +   W   A+   PD
Sbjct: 508 ALNLNPENSGPAHRGALALAHMGDTKRARDWAARAIAIDPD 548


>gi|146337788|ref|YP_001202836.1| TPR repeat-containing UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Bradyrhizobium sp.
           ORS278]
 gi|146190594|emb|CAL74596.1| conserved hypothetical protein; putative
           UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase with TPR repeats
           [Bradyrhizobium sp. ORS278]
          Length = 713

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 53/172 (30%), Gaps = 11/172 (6%)

Query: 93  MSIAAHNIPLAR------KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           + +   ++ LA+       +H   + Q    +      L         + + A E     
Sbjct: 222 LHLGLGDVLLAQGVFNDAALHYRRACQLMPDDAEAARQL-GHALHQAGRASEAIEAYRRA 280

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             +  T    + +L      +G L +A      AL + P        +   +        
Sbjct: 281 ALLDPTNVVLLSNLAACLYGLGQLEAALAACRNALALQPGYAPAHTNLGIIHERRGAMDE 340

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           A+    +       + R  A L    ++     GD+ A+   + +++ L  +
Sbjct: 341 AVAAHRRAIAADPSYARGHANL----AVALRHAGDIDAALAASHQAVALAPD 388


>gi|67527889|ref|XP_661796.1| hypothetical protein AN4192.2 [Aspergillus nidulans FGSC A4]
 gi|40740101|gb|EAA59291.1| hypothetical protein AN4192.2 [Aspergillus nidulans FGSC A4]
 gi|259481206|tpe|CBF74516.1| TPA: DnaJ and TPR domain protein (AFU_orthologue; AFUA_1G05900)
           [Aspergillus nidulans FGSC A4]
          Length = 634

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 82/253 (32%), Gaps = 40/253 (15%)

Query: 126 EVQIALAERQY-NIAHEKLEMMLQIPA-------TREFAVYSLYFESCRIGDLNSAQRYA 177
           E Q+ +A       A +    ML+           R  A Y L       G+ + A +  
Sbjct: 293 EAQLKMATGNSFGKAQDIAINMLRDNNQDPDALLIRAKAYYGL-------GETDQALKSL 345

Query: 178 TKALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNR 225
              + + PD     + +                  AK++ +AI    +     +      
Sbjct: 346 KMCIGLDPDHREAIKLLRMLQKLTRTKEEGNNAFKAKDYRKAIELYTEALSVDETNKDVN 405

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A +L  R+    +  +   +  D  E+L+L    I A    AK+       ++A    + 
Sbjct: 406 AKILQNRAQAYINLKEYDEAIKDCTEALRLDPTYIKAQKMRAKAHGGAGNWQEAVSDYKA 465

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           + + NP             +     ++RA    E+ K   +    +  ++ +    D   
Sbjct: 466 VAEANP-----------GEKGIREDIRRAEF--ELKKAQRKDYYKILGVSKDATETDLKK 512

Query: 346 AKAMLAMKIAPRK 358
           A   LA+K  P K
Sbjct: 513 AYRKLAIKYHPDK 525



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 32/186 (17%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               ++RAI    +      E N N +I    R+  N    + + +  DA  + +L   +
Sbjct: 149 KDGNYNRAIEEFTKAI----ELNPNNSIYRSNRAAANLAAHNYLDALEDAERADELDPGN 204

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
                  +++L +  +  +A  +LE   ++ P              +   +      L  
Sbjct: 205 NKILHRLSRTLTALGRPAEALEVLE---RMQP------------PASAADRQNAEKMLRF 249

Query: 320 INKESVESLVIVSK---IALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSH 373
           IN    ++   +++    ++ +  IDQA       +K       + LL   AQ++ A  +
Sbjct: 250 IN----QAKETLAENRGASMAVFCIDQARQLLGPGVKEP---RAWTLLTAEAQLKMATGN 302

Query: 374 NTDKIL 379
           +  K  
Sbjct: 303 SFGKAQ 308


>gi|325921439|ref|ZP_08183295.1| PAS domain S-box [Xanthomonas gardneri ATCC 19865]
 gi|325548081|gb|EGD19079.1| PAS domain S-box [Xanthomonas gardneri ATCC 19865]
          Length = 644

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 16/202 (7%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 60  RSLRAAPRTALLPVVHVSAASIATGDMATGLDAGADAYLIHPVDPSVLVATLRTLLRARN 119

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
              A+     + +      +       A L    +     +    A+  DAI++  L   
Sbjct: 120 AEDALRISEARFREIFEHISAPIAVVDANLHTHEANAAFQRLIGSATPGDAIQAAGLDQA 179

Query: 258 ----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSENTVGKL 311
                   A    A+   + +  R    + E  W+V+P+  P++  +   L+ + T  +L
Sbjct: 180 TTVHALTTALAQRARWSGTLSIIRDG-KLCETEWRVSPYREPDLGLL---LVEDVTEQRL 235

Query: 312 KRALRLEEINKESVESLVIVSK 333
           +   + +E++  + E    +++
Sbjct: 236 REREQRQELDTATTELAHQIAE 257


>gi|262304959|gb|ACY45072.1| acetylglucosaminyl-transferase [Artemia salina]
          Length = 289

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 8/166 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GMVQEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +        + + A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDINGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               +    A      +  + D G++  +      +LKL  +   A
Sbjct: 151 INPGF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPDFPDA 192



 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A    N   +       + A  L   +    
Sbjct: 10  KRAIELQPNFPDAYCNLANALKEKGMVQEAEDCYNTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMGDINGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYKTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|255011350|ref|ZP_05283476.1| hypothetical protein Bfra3_19563 [Bacteroides fragilis 3_1_12]
 gi|313149164|ref|ZP_07811357.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
 gi|313137931|gb|EFR55291.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
          Length = 320

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 82/231 (35%), Gaps = 10/231 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A    + + A +     L I       +  L     + G+   A     + + + P+   
Sbjct: 38  AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQIYMQTGEFVKAHELLERMIALEPELTS 96

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +     + + +         +K  A E     A  L+ ++    D G M  ++   
Sbjct: 97  TYLTLANLCFMQENYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            +++ L D+   A +  A++L    +  +A   +E I   NP  E A +      +   G
Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211

Query: 310 KLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           K + A      + E+N  + ++ + + ++ +    +  A      A+ + P
Sbjct: 212 KQEEAENDYLSVTEMNPFNEQAYLYLGQLFITQKKLSAAIELFDEAIDLNP 262


>gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Acyrthosiphon pisum]
          Length = 1185

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 79/259 (30%), Gaps = 16/259 (6%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +        V L      L       A    E  L
Sbjct: 166 LGKACIAFNRKDYRGALAYYKKAL-RSNPQCPADVRLGMAHCFLKLGNIEKARLAFERAL 224

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           Q+ +    A+  L          GD+       +KA  I    P V   +   +   K++
Sbjct: 225 QLDSKCVGALVGLAIMKLNGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS 263
           +++   L +      E    RA      +     + +   ++    ++ +      ++  
Sbjct: 285 TKS-ELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYYQATQFAPVTFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHLLSENTVGKLK-RAL 315
               +  I       A    EK+ K   HP        + ++Y    ++      K    
Sbjct: 344 YGLGQMYIYGGDMENAAQCFEKVLKA--HPGNYEAMKILGSLYADSKNQQKRDIAKSHLK 401

Query: 316 RLEEINKESVESLVIVSKI 334
           ++ E   + VE+ V +++I
Sbjct: 402 KVTEHFPDDVEAWVELAQI 420


>gi|196000955|ref|XP_002110345.1| hypothetical protein TRIADDRAFT_21924 [Trichoplax adhaerens]
 gi|190586296|gb|EDV26349.1| hypothetical protein TRIADDRAFT_21924 [Trichoplax adhaerens]
          Length = 360

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 8/156 (5%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA--LDISPDAPW 189
            +++++ A +  +  LQ+  +  +A   L  E   IG+L+ +Q+    A   D      W
Sbjct: 117 LQKEHDDAIKFFQRALQVDPSFAYAYTLLGHEYSLIGELDKSQKLFKDAVYADSRHYHAW 176

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++       +W+          K A   N + +ILL    L    +     +    
Sbjct: 177 YGMGMIYYKQEKFDWAEVR------FKQAFAINPSSSILLCHIGLAQHAQNRSDEALTTM 230

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             ++KL  N+I+     A  L +  +  KA   LEK
Sbjct: 231 ESAIKLDPNNILCQYHHAAMLYAIGEYEKALSGLEK 266


>gi|108759977|ref|YP_631572.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622]
 gi|108463857|gb|ABF89042.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622]
          Length = 499

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 76/246 (30%), Gaps = 22/246 (8%)

Query: 126 EVQIALAE-------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             Q A A           + A +  E ++        A ++L   + R G  + A+    
Sbjct: 73  SAQSAFAAALQSYEAGDLDGARKGFEAVVDELPQSLNAQFNLGVIAERQGRPDDARVAYE 132

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           K L + P        +   Y        AI    +  K         A LL + S+    
Sbjct: 133 KVLLLDPAHVPAVVNLGVMYRAQGRLDEAIALFQRALKT--PGREYDASLLNSLSITYRV 190

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---- 294
            G +  S   A   L    +   A    A    ++ K R AE++         H E    
Sbjct: 191 AGKLDESEAAARRVLVRNKDDPGAYKNLAHVAYAREKYRLAELL---AGTARKHSENDPA 247

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               +  +Y  L  ++    L +  +   ++ +     + +  +AL       A      
Sbjct: 248 LYNLLGMVYLKL--DDRARALVQFQKAISLDAKFTPGYLNLGALALSYRDYVGAERSFGK 305

Query: 351 AMKIAP 356
           A+++ P
Sbjct: 306 AVELEP 311


>gi|261195899|ref|XP_002624353.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis
           SLH14081]
 gi|239587486|gb|EEQ70129.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis
           SLH14081]
 gi|239614438|gb|EEQ91425.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis
           ER-3]
 gi|327351448|gb|EGE80305.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 373

 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 61/163 (37%), Gaps = 19/163 (11%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDA 187
           A      ++  +K +            +  L  Y E+        A +       +  ++
Sbjct: 226 AFKAGNVDLGLDKYQK----------GLRYLNEYPEASDSDPPELAAQMTQLRFTLHSNS 275

Query: 188 PWVTEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             +    ++++   + W+  A+     K  NAK+  + +A    A +L      D   + 
Sbjct: 276 ALLAN-KLRRFEDGRSWAGFALET--AKAANAKDAEKAKAYYRRAVALVGLK--DDEEAL 330

Query: 247 HDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIWK 288
            D  E+ KL    +  +   A+   +  +++RK + +L+K +K
Sbjct: 331 KDLAEAAKLAPGDVAIANERARVKKAIADQQRKEKEMLKKFFK 373


>gi|261408185|ref|YP_003244426.1| tetratricopeptide repeat-containing protein [Paenibacillus sp.
           Y412MC10]
 gi|261284648|gb|ACX66619.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1112

 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 79/278 (28%), Gaps = 34/278 (12%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIA-------- 139
           +++ A +          +       +          L   +      Q+           
Sbjct: 425 IAVFAADGRELVAYQPKLRTLERTPDPATAIGKPEDLKNTEALFLAGQHLEQYRHATYEP 484

Query: 140 HEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALD------ISPDAPWVT 191
                  L+      R    Y L     R G    ++ Y  KA++        P      
Sbjct: 485 EAYYVEGLRRDAGDARLNNAYGLLL--LRRGCFTQSEVYFKKAIETLTRHNARPYDSEPF 542

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             + +          A  +L +   +       +    +A +    +K +   ++     
Sbjct: 543 YHLGKALKWQGRLDEACAYLYKSVWSGA----WQGAGYLALAQIACEKQEYEEAFELMER 598

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSEN 306
           SL     +  A    +  L    +   A   LE+  K++P       E+A +Y  L  E+
Sbjct: 599 SLAAQYRNYKARHLKSFVLRKLGRLADAASWLEETLKLDPMDAGAMNELAAVYQELKQED 658

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               +     L ++ +++    + +++   + G    A
Sbjct: 659 KSRHV--YESLAQLLRDNPHHYIAIAQDYADAGQYGDA 694


>gi|152990735|ref|YP_001356457.1| hypothetical protein NIS_0990 [Nitratiruptor sp. SB155-2]
 gi|151422596|dbj|BAF70100.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 418

 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 8/160 (5%)

Query: 128 QIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           Q A  E    +  A    E + ++  +R F + ++     R    + A +YA K L + P
Sbjct: 37  QTAFLESNGYFAPAASMYEKLYKMTGSRLFLIKTI-ENYYRAKQFDKALQYARKGLKLYP 95

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             P   E     Y+  K+  +A  ++ +  K  K       +     +     +     +
Sbjct: 96  KEPRFYELAAVLYIQKKDLIQAEKYVKEAIKLKKSPQNYELL-----ASIYLTQKRYELA 150

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                 +  L  ++   S  A        KKR+A   LE 
Sbjct: 151 LKYYKSAYALKPSATTLSTMAYIMYFYLGKKREAIAYLET 190


>gi|148258470|ref|YP_001243055.1| hypothetical protein BBta_7275 [Bradyrhizobium sp. BTAi1]
 gi|146410643|gb|ABQ39149.1| hypothetical protein BBta_7275 [Bradyrhizobium sp. BTAi1]
          Length = 385

 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 99/293 (33%), Gaps = 15/293 (5%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEM-MLQI 149
           M+       LA ++     +Q    ++   +LL  + A  E     + A    +  ++ I
Sbjct: 1   MAKDRGEFELAIRLFDNALKQGILEDKQRGFLLYSRGASYESLGLRDRALADFDAAIVLI 60

Query: 150 PATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           P      +Y LY        G+   A +       ++P  P     +   Y    +  +A
Sbjct: 61  PE--FPNLY-LYRGVIWGDKGEYQRALQDFLTVSRLTPTDPLAFNNLGNVYDRLGDLDQA 117

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I   ++      ++    A     R+   A K +   +  D  +++ L      A +  A
Sbjct: 118 IVNFDRAIGLRADY----AQAYYNRAHTYALKQERERAIADYDQAISLQPLFSDAYVNRA 173

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKES 324
              +     + A   L+   ++NP    A       +L  E     L        ++  +
Sbjct: 174 VLHLMLRNFKAALSDLDTAIRINPKDVTALTNRATINLTMERYENALTDFDSALLLHPGN 233

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
               +   ++ L  G++D A A    A ++ P     ++ A I + +    D+
Sbjct: 234 AAIFLGRGRVHLIAGALDSAIADFKTAARLRPNNPYPIIWAHIARVHKGEDDR 286


>gi|148255708|ref|YP_001240293.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146407881|gb|ABQ36387.1| putative TPR repeat protein [Bradyrhizobium sp. BTAi1]
          Length = 1406

 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 80/236 (33%), Gaps = 13/236 (5%)

Query: 127  VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             +        N A     ++L     +  A+  L         L+ A+    +A+ ++  
Sbjct: 789  ARKLQGRGDNNDAEAIFRLILAGQPRQFDALVGLGMICSGSSRLDEAKDCFQRAVAVNAK 848

Query: 187  APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            +     ++      A  +  A+         +         +L A ++   ++G    + 
Sbjct: 849  SAEAHGSIGAVEASAGRYDAAVGHYETALSLSPNHPG----ILYAFAMVRQNQGMSEEAM 904

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301
                 +++     + A       L +  K  +A     K+ + +P     H  IAN+   
Sbjct: 905  VLLRRAIENKPQHLDAHFALGNLLYTAGKDIEAAKCYLKVLEFSPEHAETHNNIANVLLR 964

Query: 302  -LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                E  +   KRA        +  ++   +    LE+  +++A  + +LA+K+ P
Sbjct: 965  QGHRERAIEHYKRA---IASRPDYGDAYGNLGNAYLELNRLEEAIEQNLLALKLKP 1017



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 93/286 (32%), Gaps = 26/286 (9%)

Query: 86   KALYTGLMSI-----AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            + L  G +++        +   A  +   +        + LV L    I     + + A 
Sbjct: 779  QTLADGAVAVARKLQGRGDNNDAEAIFRLILAGQPRQFDALVGL--GMICSGSSRLDEAK 836

Query: 141  EKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
            +  +  + +   +           E+   G  ++A  +   AL +SP+ P +  A     
Sbjct: 837  DCFQRAVAVNAKSAEAHGSIG-AVEA-SAGRYDAAVGHYETALSLSPNHPGILYAFAMVR 894

Query: 199  VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                    A+  L +  +N        A   +   L  A  G  I +    ++ L+    
Sbjct: 895  QNQGMSEEAMVLLRRAIENKP--QHLDAHFALGNLLYTA--GKDIEAAKCYLKVLEFSPE 950

Query: 259  SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR-- 316
                    A  L+ Q  + +A    ++       P+  + Y +L   N   +L R     
Sbjct: 951  HAETHNNIANVLLRQGHRERAIEHYKRAIASR--PDYGDAYGNL--GNAYLELNRLEEAI 1006

Query: 317  ----LE-EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                L  ++  E   S   +      +G  ++A A    A+++AP 
Sbjct: 1007 EQNLLALKLKPERFGSYNNLGVAYQALGRFEEATAAFEKALELAPD 1052


>gi|268323384|emb|CBH36972.1| hypothetical protein BSM_04490 [uncultured archaeon]
          Length = 640

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 77/255 (30%), Gaps = 22/255 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A ++    ++I +    A  +L      +G    A     +A+ I P        
Sbjct: 400 GRKEDAEKEWREAIRINSDSAEAHNNLGNSLYDLGRKEDAVEEYREAIRIKPHFAEAHYN 459

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +            A+    +  +   ++    A   +   L N   G    +  +  E++
Sbjct: 460 LGNLLNNMGRKEDAVEEYREAIRIKPDY--AEAHNNLGVLLNNV--GRKEDAAEEYREAI 515

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308
           ++  +   A I     L    +K  AE    +  ++N      H  +  +  ++  +   
Sbjct: 516 RINHDFAEAHINLGNLLKDMGRKEDAEKEYREAIRINHDFTEAHINLGVLLNNVGRKEAA 575

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
            +  R      I  +  E+   +  +  + G  ++A     +A ++              
Sbjct: 576 KREYREA--IRIKPDDAEAHANLGILLSKTGKKEEAKDALEVAKRLFES----------- 622

Query: 369 QANSHNTDKILYWTQ 383
           +    +      W +
Sbjct: 623 EGREEDVKGAEEWLK 637


>gi|262304989|gb|ACY45087.1| acetylglucosaminyl-transferase [Euperipatoides rowelli]
          Length = 287

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVAEAEDCYNTALRLCPTHADSLNNL--ANIKREQGLTEDATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ ISP        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMQDIPGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAFCNLANALKEKGQVAEAEDCYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGLTEDATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIPGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|256831172|ref|YP_003159900.1| diguanylate cyclase with TPR repeats [Desulfomicrobium baculatum
           DSM 4028]
 gi|256580348|gb|ACU91484.1| diguanylate cyclase with TPR repeats [Desulfomicrobium baculatum
           DSM 4028]
          Length = 816

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 12/162 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLE---MMLQIP--- 150
            +   AR+    V      H   L+ L L       E  +  A    E    M       
Sbjct: 656 GDPVAARQAFEQVLSIRPDHVYALIRLGLMA---EEEGDFERAWNLYEQVRAMSDGEHLA 712

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           AT   A   L   + R  D ++A+ Y  +A+  +P        +   Y+   +       
Sbjct: 713 ATHNLAYRYLARLAFRRDDRDTAREYLHQAITANPQDAHSFHLLATIYLERGDDPEIAES 772

Query: 211 LNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAI 250
           L ++  + K         ++         ++ +       A 
Sbjct: 773 LARQSVHLKTDSPAFWEVLITALEQQGKIEEANQTKIRAAAQ 814



 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/144 (9%), Positives = 42/144 (29%), Gaps = 2/144 (1%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y  A    + +  +       +Y+      + GD  +A++   + L I PD  +    
Sbjct: 622 NKYAKARTIFQDLTGLHPEHIMPLYNFGCACLKDGDPVAARQAFEQVLSIRPDHVYALIR 681

Query: 194 VVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           +        ++ RA       +   + +       +     +     + D   +     +
Sbjct: 682 LGLMAEEEGDFERAWNLYEQVRAMSDGEHLAATHNLAYRYLARLAFRRDDRDTAREYLHQ 741

Query: 252 SLKLCDNSIMASICAAKSLISQNK 275
           ++        +    A   + +  
Sbjct: 742 AITANPQDAHSFHLLATIYLERGD 765



 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 31/220 (14%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G++  A     KAL +         ++   Y    ++++A T      ++    +   
Sbjct: 586 AQGEIYDAIAEYKKALTVDEGNLLARNSLGVCYARLNKYAKARTIF----QDLTGLHPEH 641

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + L          GD +A+     + L +  + + A I        +          E+
Sbjct: 642 IMPLYNFGCACLKDGDPVAARQAFEQVLSIRPDHVYALIRLGLMAEEEGD-------FER 694

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            W         N+Y  + + +    L     L             ++++A      D A 
Sbjct: 695 AW---------NLYEQVRAMSDGEHLAATHNLA---------YRYLARLAFRRDDRDTAR 736

Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQS 384
                A+   P     F LLA I      +  +I      
Sbjct: 737 EYLHQAITANPQDAHSFHLLATI-YLERGDDPEIAESLAR 775



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 12/154 (7%)

Query: 67  SCPAMLFHMLHKR---NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
             P        +      D  Y  +  GLM+    +   A  ++  V       +    +
Sbjct: 656 GDPVAARQAFEQVLSIRPDHVYALIRLGLMAEEEGDFERAWNLYEQVRAMSDGEHLAATH 715

Query: 124 LLE----VQIALAERQYNIAHEKL-EMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRY 176
            L      ++A      + A E L + +   P        + ++Y E  R  D   A+  
Sbjct: 716 NLAYRYLARLAFRRDDRDTAREYLHQAITANPQDAHSFHLLATIYLE--RGDDPEIAESL 773

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           A +++ +  D+P   E ++       +   A   
Sbjct: 774 ARQSVHLKTDSPAFWEVLITALEQQGKIEEANQT 807


>gi|152982806|ref|YP_001353651.1| hypothetical protein mma_1961 [Janthinobacterium sp. Marseille]
 gi|151282883|gb|ABR91293.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 542

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 18/243 (7%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L  QIA A+       +       + P+ R   +      + R+G+L  A++   KAL  
Sbjct: 242 LLAQIAEAQGNEEAVLDAFNKSYDVIPSARRSRLMG--DAAYRVGNLEQARQAFNKALTH 299

Query: 184 SPDA--PWVTEA--VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           +  +     ++A  + Q  V   + + A+  L+   ++ ++     A      +   A  
Sbjct: 300 TRGSLTAQASDALSLAQVQVDIGDAADALNVLSAAAQDHQDDPYFAARQATIAAQAFARL 359

Query: 240 GDMIASYHDAIESLKLCDNSIM--ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           GDM ++      + +L D       ++  AK+      + +   I+ K  K +       
Sbjct: 360 GDMNSAQAAFASAKELADGIRADIHTLTLAKAAFCVGLEEEGARIVAKAIKADHENIRLV 419

Query: 298 IYTHLLSENTVGKLKRALRLEEINKES--VESLVIVSKIA--LEMGSIDQAHAKAMLAMK 353
            +   + ++T         L E   E    E  +IV +    +  G  D++ AK   A+ 
Sbjct: 420 AFARRVLQDTGN-----EALIEKVVEESISEGALIVEQATQLMRAGQFDESLAKLEEALT 474

Query: 354 IAP 356
             P
Sbjct: 475 ATP 477


>gi|298242698|ref|ZP_06966505.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
 gi|297555752|gb|EFH89616.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
          Length = 736

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 11/198 (5%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY--SLYF 162
             + +      HN+ L +LL  ++  ++ +   A E+L +     P T E      +L  
Sbjct: 533 AEATLRDLLELHNDALNHLLLAELYSSQERNEEAEEELHQAEALNPTTDEQGSIEANLGA 592

Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            + R   + +A  +  +A  + P+ P  W     V + +        +       K+A E
Sbjct: 593 LAMRREQMATALAHFERASKLVPNHPGIWFNLGFVHRLLGH------METAASHYKHAIE 646

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                       +  N ++ D   +       L    +S       A  L    ++R A+
Sbjct: 647 LEPQDIRPYSELTAINMNQQDQQEARRVVEAGLAANPDSAHLLALHASVLHVLGEERAAQ 706

Query: 281 VILEKIWKVNPHPEIANI 298
             LE+  +++P  EI   
Sbjct: 707 RQLEQAERLDPTLEIVQA 724


>gi|195440676|ref|XP_002068166.1| GK10384 [Drosophila willistoni]
 gi|194164251|gb|EDW79152.1| GK10384 [Drosophila willistoni]
          Length = 931

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  ++   
Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFNE--- 683

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     E++++  +     +   +    QN+   A     +  K  P   I       
Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQNRTNDAAQTYTQGIKKCPT-SIPLWILSA 740

Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358
             E   G L +A   LE     + +  ++  +     L  G  + A      A++  P  
Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVPILWLEAIRVELRAGLKEIASTMMARALQECPNA 800



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|74152076|dbj|BAE32070.1| unnamed protein product [Mus musculus]
          Length = 463

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 87/237 (36%), Gaps = 29/237 (12%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            + + +  + P  +      L  +   +G+   A+ +  +AL  +    +V     + + 
Sbjct: 198 RKAVRLNPEDPYLKVL----LALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFR 253

Query: 200 LAKEWSRAITFLNQKKKNAKE-----------WNRNRAILLIARSLENADKGDMIASYHD 248
                 +A+  LN+  + +             + +  + L  +R+ +   + ++      
Sbjct: 254 RKHRVDKALHLLNRALQASPSSGYLHYQKGLCYKQQISQLRTSRNRQPRRQDNVQELAQQ 313

Query: 249 AI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           AI    E+LKL     MA +C A+     ++  +AE   +K            +  H+  
Sbjct: 314 AIHEFQEALKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKALNNK------TLVAHIEQ 367

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +  +    R  R  + +K+S +  + +    L++     A  K + A++    + + 
Sbjct: 368 DIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWRKLLTALEKVAERRVC 420


>gi|326406732|gb|ADZ63803.1| TPR repeat-containing protein, tetratricopeptide repeat family
           [Lactococcus lactis subsp. lactis CV56]
          Length = 418

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 65/198 (32%), Gaps = 23/198 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154
            +   A  +      +    +  + + L  +    +  Y+ A  +   + +      T+ 
Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAI 208
               S+Y    RIGD  +       A   L+ S +     E + +    Y      +RAI
Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAI 223

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               + +K   E+ +      +A +       +  A+   A + +K   N++     A+K
Sbjct: 224 ANFKRLEKMDVEFLKYE----LAYAQTLEANQEFEAALEMAKKGMKKNPNAVPLLHFASK 279

Query: 269 SLISQNKKRKAEVILEKI 286
                  K  AE  L   
Sbjct: 280 ISFKLKDKAAAERYLMDA 297


>gi|326402277|ref|YP_004282358.1| hypothetical protein ACMV_01290 [Acidiphilium multivorum AIU301]
 gi|325049138|dbj|BAJ79476.1| hypothetical protein ACMV_01290 [Acidiphilium multivorum AIU301]
          Length = 733

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 46/305 (15%)

Query: 93  MSIAAHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQI 149
           +++ A N    ARK+    S+     +E L+ L   Q   A+     A E      +   
Sbjct: 26  VALDAGNTRECARKLFQQASELAPSWDEPLIRL--AQSYRADGHVAEAKELYIQASIRNR 83

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-------------AVVQ 196
                   Y +   + +  D + A  Y ++A D++P                    A ++
Sbjct: 84  WRIEPLLAYGIL--ALQSNDPHDAVGYLSRATDLNPTNHQAWHGLALALGALGLQGAALR 141

Query: 197 QYVLAKE-----------WSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIA 244
               A             ++     ++       +E     AI L   +     +G    
Sbjct: 142 AMANAGNLAPDILHYAITYNELRDTVDHDLILQIREPKWTTAIELCLEANAALRRGGAEE 201

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299
           +      ++ +  ++         + ++      AE+ L K     P       ++A   
Sbjct: 202 AIALLETAIDVEPDASDILALLGNAYLANQMPEMAELHLRKALLRAPENIDIANDLAVAL 261

Query: 300 THLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAMLAMKIA 355
                  +    L +          +  S +++++  +   + D    A        K  
Sbjct: 262 GRQYRFGDASDILNKLDI-----PANASSTILLNRATIRASAGDLAGSARDIKAATPKAN 316

Query: 356 PRKEI 360
            R  +
Sbjct: 317 DRSRL 321


>gi|297798124|ref|XP_002866946.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312782|gb|EFH43205.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1043

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 17/211 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146
           L  G+  +   N   A  +   V ++   + E L+          +R+   A     + +
Sbjct: 292 LSRGIAQVNEGNYMKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 349

Query: 147 LQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              P AT  +        +   G+   A    TKAL   P++P V          +K+++
Sbjct: 350 QSNPAATEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 407

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+  L+   K  K+       L +A +      G+   +    ++S++L  N + A + 
Sbjct: 408 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 463

Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289
            A+         KA   +E+       +WK 
Sbjct: 464 LAQFYQELADHCKALECIEQVLQVDNRVWKA 494


>gi|218781315|ref|YP_002432633.1| peptidase C14 caspase catalytic subunit p20 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762699|gb|ACL05165.1| peptidase C14 caspase catalytic subunit p20 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 661

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 39/101 (38%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
               + A +  E +    +     + +L +     GD++ A  YA +AL  +PD+P    
Sbjct: 225 TGSVSQARKTWEELAGDRSWDTVLLCNLGWLCLETGDVDQADHYAMQALAAAPDSPNAMA 284

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             ++      +++ A+  +   ++        RA+     +
Sbjct: 285 IRLEVLFARGQYTNAVQLVFANERQTTPRYEERAVAYAVVA 325



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 12/138 (8%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                +LL        + GD+  + H A+++L    +S  A     + L ++ +   A  
Sbjct: 242 RSWDTVLLCNLGWLCLETGDVDQADHYAMQALAAAPDSPNAMAIRLEVLFARGQYTNAVQ 301

Query: 282 ILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           ++    +    P   E A  Y  +    +              ++S+ S+  +++   + 
Sbjct: 302 LVFAN-ERQTTPRYEERAVAYAVVAGWKSFQ--------AGGGQDSLSSMESLAEEFPQA 352

Query: 339 GSIDQAHAKAMLAMKIAP 356
            S  QA      A++  P
Sbjct: 353 ESFSQAATTMKDALEGRP 370


>gi|327404353|ref|YP_004345191.1| hypothetical protein Fluta_2367 [Fluviicola taffensis DSM 16823]
 gi|327319861|gb|AEA44353.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 322

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 26/154 (16%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--------RIGDLNSAQRYATKALDIS 184
           ++ Y+ A    + ++   +        LY E+          +GD   A +   KAL+I 
Sbjct: 165 QKNYSKAITHFQTLISKDS--------LYKEAYNNLGFCYYSLGDNIKALKAINKALEID 216

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGD 241
           P  P   +   Q ++   ++ +A+  LN+        + +   RA++ +     +   GD
Sbjct: 217 PRYPEAYDKRSQVWMATGDYKKALEDLNKALSLYPFLSTSLNNRALIYLEMKQYSDALGD 276

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           M      A    K   + +   I  A+       
Sbjct: 277 MNLLLQTA----KPTADLL---IIRAQIYKEMGN 303


>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
 gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 693

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 9/197 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G    A     KAL+++P+            +  +++  AI + ++      E + N
Sbjct: 347 LTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAILYCDRVL----EIDSN 402

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +   L  ++    +      S         +  ++  A      S    NK   A V   
Sbjct: 403 QVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIGVSQEYLNKPEDALVSFN 462

Query: 285 KIWKVNPHPEIANIYTHLLS----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           K  ++ P   I   Y    S          LK    +  ++ E+ E+  +   I +E G+
Sbjct: 463 KAIEIEPK-NIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGLINMEQGN 521

Query: 341 IDQAHAKAMLAMKIAPR 357
            D+A       + I+P 
Sbjct: 522 YDEALKNFDAVLNISPD 538



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM-L 147
           TGL+++   N   A K    V      + + L+   + Q      +   A E   E + L
Sbjct: 512 TGLINMEQGNYDEALKNFDAVLNISPDNIDVLIN--KGQAYGFMDKPEKALEYFDEALDL 569

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +           +      +GD +++ +     L++ P+ PW    +   Y    E+ +A
Sbjct: 570 ESDNVEALNYRGVAL--KHMGDHDASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYEKA 627

Query: 208 ITFLNQKKKNAKEW 221
           I   +       ++
Sbjct: 628 IESFDNALDEDPKF 641


>gi|295676126|ref|YP_003604650.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
 gi|295435969|gb|ADG15139.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
          Length = 579

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 58/196 (29%), Gaps = 10/196 (5%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           M    S      +     L +            A E    +L++      A+  L   + 
Sbjct: 1   MSKQASLPQQLDH----LLRQAVALQQNGALVEAEEMYREILELKPKHGDALRWLGELAL 56

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G L        KAL ++   P V   +       +    A+    +      ++    
Sbjct: 57  QTGRLQEGVELLKKALALNARQPAVHSNLAYALNALQRHDEALACAERALVMQPKF--AD 114

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+     +L +  +   + +      +L L      A    A  L    +   A    ++
Sbjct: 115 ALNNRGNALASLHR--PLEALASYERALSLVPEFAPAWNNRACVLRDLGRYADALDSCDQ 172

Query: 286 IWKVNPHPEIANIYTH 301
              +   P+ A+ +++
Sbjct: 173 ALALQ--PDYADAWSN 186


>gi|295690571|ref|YP_003594264.1| TPR repeat-containing protein [Caulobacter segnis ATCC 21756]
 gi|295432474|gb|ADG11646.1| TPR repeat-containing protein [Caulobacter segnis ATCC 21756]
          Length = 638

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 37/225 (16%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +GD ++A     +A+ ++P  P   + + Q + L  E + A     Q+    K+  + 
Sbjct: 55  IALGDGSAAIAALREAVALNPALPACWDMLEQLHRLRGELADA-DTAAQRLAGLKQLPQA 113

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +     +      GD+  +     + L+    S+ A    A+  + +     AE +L 
Sbjct: 114 IVV-----AQSLLADGDLEPAEEVLKDHLRAAGESVGALRLLARIRLERGALEDAEAVLA 168

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                                           + +   +  E+    + + L+      A
Sbjct: 169 A-------------------------------ILDQAPDYHEARFDYAMVLLQGQKHRLA 197

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
             +A   +  AP    FL L  +      + + ++      L A 
Sbjct: 198 RREAERLLIDAPDSRAFLKLYGVACLGLGDFEPVIDLYARLLAAP 242


>gi|218704807|ref|YP_002412326.1| tetratricopeptide repeat-containing protein [Escherichia coli
           UMN026]
 gi|293404822|ref|ZP_06648814.1| yciM protein [Escherichia coli FVEC1412]
 gi|293409672|ref|ZP_06653248.1| yciM protein [Escherichia coli B354]
 gi|298380463|ref|ZP_06990062.1| yciM protein [Escherichia coli FVEC1302]
 gi|300897339|ref|ZP_07115769.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
 gi|218431904|emb|CAR12789.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|284921162|emb|CBG34228.1| tetratricopeptide repeat protein [Escherichia coli 042]
 gi|291427030|gb|EFF00057.1| yciM protein [Escherichia coli FVEC1412]
 gi|291470140|gb|EFF12624.1| yciM protein [Escherichia coli B354]
 gi|298277905|gb|EFI19419.1| yciM protein [Escherichia coli FVEC1302]
 gi|300358889|gb|EFJ74759.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
 gi|323964620|gb|EGB60093.1| TPR repeat-containing protein [Escherichia coli M863]
 gi|327253975|gb|EGE65604.1| tetratricopeptide repeat family protein [Escherichia coli STEC_7v]
          Length = 389

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 62/281 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361
               +   L +  I +A   +  A       ++  P   +F
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318


>gi|15644443|ref|NP_229495.1| hypothetical protein TM1695 [Thermotoga maritima MSB8]
 gi|4982272|gb|AAD36762.1|AE001810_1 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 357

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286
           L   +LE AD+     ++      L + +N   A       L+ Q K  +    L+K   
Sbjct: 100 LYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLDKAVE 159

Query: 287 ---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
              W V  +  +   Y +L   +    +    R  E N     +  ++++   EM   D 
Sbjct: 160 IDPWLVQAYASLGEAYYNL--GDYEKAIHYWERELEYNPNDKITYFMITEAYYEMNRKDL 217

Query: 344 AHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
           A       ++I P        L+Q+ +    N +K   
Sbjct: 218 AVKTLERLLEIDPDNIPALYQLSQLYR-ELGNEEKARE 254



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 83/246 (33%), Gaps = 36/246 (14%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD--ISPD-APW 189
           E  + +     E M +           +  E      L           +  I P+   W
Sbjct: 33  EGDWELLK---EDMKKKEN--------IMKEVQTCEKLEKVVHLDETVYEPLIFPEFQEW 81

Query: 190 VTEAV-----VQQYVLAKEWSRAITFLNQKKKNAK--------EWNRNRAILLIARSLEN 236
           + E        +   L   +  A+ + ++   +          + + N A     +    
Sbjct: 82  LREENITPKDFKNVSLKGLYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLL 141

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294
            ++G +        +++++    + A     ++  +     KA    E+  + NP+ +  
Sbjct: 142 VEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPN-DKI 200

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               I   Y  +  ++    +K   RL EI+ +++ +L  +S++  E+G+ ++A      
Sbjct: 201 TYFMITEAYYEMNRKDLA--VKTLERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEEK 258

Query: 351 AMKIAP 356
            M   P
Sbjct: 259 IMNCKP 264


>gi|322417874|ref|YP_004197097.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320124261|gb|ADW11821.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 639

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 78/264 (29%), Gaps = 37/264 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             LA      A    E  LQ         Y L     R GDL  A R   ++L + P   
Sbjct: 312 AQLAAGHDAEAIAAYEDALQKKEDSSRVRYHLGMLYERKGDLEEAVRNFAESLRLDPVNG 371

Query: 189 WVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNR-----------NRAILLIARS 233
                +   Y L  +   A       + ++  N   + R             A+    ++
Sbjct: 372 DARRRLADIYALRGDLPLAVGEYRELITRQADNPLNYLRLARLLEKQRNYREAVTAYDKA 431

Query: 234 LE---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           L                +        +     E LKL   +  A        + Q +   
Sbjct: 432 LSLDPANSEAHRSIGFLHLHLKQPEQAEKHLQEVLKLDQRNSQARDTLISIYVKQKRYGD 491

Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
              +LE+  K+NP        +  +Y     E+   + ++     ++      +L  + K
Sbjct: 492 TTTLLEEDAKLNPESADSQYRLGVMYA-FKREDEKAR-QQFDAALQLRPNHARALNALGK 549

Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357
           + L+ G  ++A      A K  P 
Sbjct: 550 LYLKQGDREKARETFAAAKKADPD 573



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 11/238 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDIS 184
            Q+     + + A ++   +  +  T   A   L   +     G+   A       L   
Sbjct: 242 AQLLELMGKRDEAEKEY-ALTGVQRT-VTAADHLKRAAKYEDAGEYALAAAEYAALLVKD 299

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    V E +    + A   + AI       +  ++ +R R  L     +    KGD+  
Sbjct: 300 PQMGGVREKLGDAQLAAGHDAEAIAAYEDALQKKEDSSRVRYHL----GMLYERKGDLEE 355

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---VILEKIWKVNPHPEIANIYTH 301
           +  +  ESL+L   +  A    A     +     A      L      NP   +      
Sbjct: 356 AVRNFAESLRLDPVNGDARRRLADIYALRGDLPLAVGEYRELITRQADNPLNYLRLARLL 415

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
               N    +    +   ++  + E+   +  + L +   +QA       +K+  R  
Sbjct: 416 EKQRNYREAVTAYDKALSLDPANSEAHRSIGFLHLHLKQPEQAEKHLQEVLKLDQRNS 473



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 56/213 (26%), Gaps = 40/213 (18%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R       AL  G + +A           +         +  L YL   ++   +R Y
Sbjct: 372 DARRRLADIYAL-RGDLPLAVGEYRELITRQA---------DNPLNYLRLARLLEKQRNY 421

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A    +  L +      A  S+ F    +     A+++  + L +        + ++ 
Sbjct: 422 REAVTAYDKALSLDPANSEAHRSIGFLHLHLKQPEQAEKHLQEVLKLDQRNSQARDTLIS 481

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEW------------------------------NRNRA 226
            YV  K +    T L +  K   E                                 N A
Sbjct: 482 IYVKQKRYGDTTTLLEEDAKLNPESADSQYRLGVMYAFKREDEKARQQFDAALQLRPNHA 541

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             L A       +GD   +      + K   + 
Sbjct: 542 RALNALGKLYLKQGDREKARETFAAAKKADPDL 574


>gi|258405687|ref|YP_003198429.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
           retbaense DSM 5692]
 gi|257797914|gb|ACV68851.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 339

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 53/183 (28%), Gaps = 15/183 (8%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R  ++L   +     ++ +      D    LK   ++  A+    +  ++Q    KA  
Sbjct: 30  TRFDSVLTSYQGQRYLEEHEYALGVEDLSHRLKQQPDNGAAAYWLGRLYLAQEHPSKALP 89

Query: 282 ILEKIWKVNPHPEIANIYTHLLS----ENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            L+K  ++ P    A+ +  +      +    +L     L  +  +  ++ V +    ++
Sbjct: 90  ALQKAVELKPQYADAHFWLGVAHWAMMDFEKERLAYERALA-LEPDHTQARVYLGHHYVD 148

Query: 338 MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQ---------SALH 387
                 A       +   P         A+  +           W            AL 
Sbjct: 149 REQWSLALIHYRRVLDEEPGHPSALFYTAECLEQLGREQSARQAWKAYLDRYPDGGRALE 208

Query: 388 AMP 390
           A  
Sbjct: 209 ATR 211


>gi|167561490|ref|ZP_02354406.1| TPR domain protein [Burkholderia oklahomensis EO147]
          Length = 606

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 109/336 (32%), Gaps = 58/336 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 51  DAPQATFAPTLPEEQKDLPNVALTSQIVYQVLAAEVALQRNLPAPAYQTYLALARDTRDP 110

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP A  V  A++   VL  + + A   L
Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWREYSPSSPRAAQVDAALL---VLGGKPADAQPML 167

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
            Q+   A   NR  AI+ +                                A + +    
Sbjct: 168 AQELARATGENRGEAIIALQALLSRGPNRVGGLTVLQDLLKNDMNRPEARLAIARQQLAT 227

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L+L  + + A++     L       +A  ++     V  +P+     
Sbjct: 228 DDKGGATQSLKEALRLKPDYLPAALM----LSQMGPNERAAGVVSFEKFVQQNPKSRDGR 283

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 284 LALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVKV 343

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
           A +K      + ++ LAQI    +++      W   
Sbjct: 344 AQKKPGADVGQAYVYLAQIALDQNNDALAAQ-WLDK 378



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 78/243 (32%), Gaps = 45/243 (18%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q+ LA+ + + A ++ E M +  ++    + +L     +   L+ A  Y  + + 
Sbjct: 283 RLALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVK 342

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++                             +KK   +  +    L    +    D+ + 
Sbjct: 343 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNND 369

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----- 297
             +     +  +     + A +  A+ L  Q K  +A  +L  +   +P  + A      
Sbjct: 370 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKAEEARKLLANLQVSDP-RDAAVIARTD 428

Query: 298 ---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              ++T    +    +L +A    E   +  +     +    ++G       +  L M+ 
Sbjct: 429 ASILFTSKRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRA 485

Query: 355 APR 357
            P 
Sbjct: 486 QPD 488


>gi|86358301|ref|YP_470193.1| putative exported protein, TonB-dependent receptor protein
           [Rhizobium etli CFN 42]
 gi|86282403|gb|ABC91466.1| putative exported protein, TonB-dependent receptor protein
           [Rhizobium etli CFN 42]
          Length = 1239

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 78/263 (29%), Gaps = 16/263 (6%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEM 145
           A+     +    +IP A ++     +Q+           L  Q            E +E 
Sbjct: 348 AIAKAYTAGFLKDIPAAIEVLKQAEKQYPDDATLPARRALLAQ---LIDDPAQMKEAVER 404

Query: 146 MLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            L I       +   + Y ES   GD   A    +++L   P +      +         
Sbjct: 405 SLSIDPRDPDGLQARARYRESY-EGDTKGALADLSRSLADMPGSSMNWNDLGLLQSDRG- 462

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A          A E +          ++   D+  M  +  +   +L +  +  +A 
Sbjct: 463 ---ANGEAEAAFLKAIELDPEDPAPHANLAILYLDQSRMKEAKREIDTALAVDPSFDIAL 519

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEI 320
           +   +  +   +  KA   L      NP     ++     HL   + +   +     + +
Sbjct: 520 LARGRYYLQNGETDKALDDLLAASTANPGYSAAQLGLAIAHLEKGDRLPSNQAVDNADRL 579

Query: 321 NKESVESLVIVSKIALEMGSIDQ 343
           +K      +   + A+++   D 
Sbjct: 580 DKNDP--AISAFRTAVDIDDYDA 600


>gi|85092996|ref|XP_959606.1| hypothetical protein NCU02424 [Neurospora crassa OR74A]
 gi|28921050|gb|EAA30370.1| hypothetical protein NCU02424 [Neurospora crassa OR74A]
          Length = 517

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 1/173 (0%)

Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            L  LL   Q  L++ + + A    +  +    +     +        +G  + A     
Sbjct: 29  PLSNLLASAQSHLSKGETSDALVYYDAAIARDPSNYLTFFKRATTYLSLGRTSQATDDFN 88

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           K L + P        + +    + +W  A     + KK  +      A      + + A 
Sbjct: 89  KVLALKPGFEGAHIQLGKLKARSADWDAAREHYEKAKKVNELVALEGAADAAGLAEKAAA 148

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            GD       A  ++ + + ++      +K L  +         L+ I ++ P
Sbjct: 149 SGDWEECVTQAGAAIMVANRAVALRQLRSKCLFERGDLEMGMSDLQHILQMKP 201


>gi|328950837|ref|YP_004368172.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451161|gb|AEB12062.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 362

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 95/270 (35%), Gaps = 21/270 (7%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAP 188
             QY+ A    +  +++      A+Y L     R+   +SA      A+ +    +P   
Sbjct: 47  AGQYDAALIAFKRAVELDEKNVEALYGLARAQLRLRLFSSAVENLKAAISLDASYTPAYV 106

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIAS 245
            + +A   QY+ A++   A   L+Q      +  R       +   R L    KGD   +
Sbjct: 107 ALAQAYTDQYINARDREAARALLDQALLVLNDAERINPEYYAIYNQRGLIYQYKGDPEKA 166

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                ++L + +   +     A + +S  +  +A  +L++   V P     + Y      
Sbjct: 167 AEAFEKALSINNEDPIVLYNLALTNLSLGRLDEALSLLKRAVAVAPQ----DSYVRARYG 222

Query: 306 NTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             +    R         +   ++  +  +   + ++  +    ++A A    A++  P +
Sbjct: 223 ALLAVKGRLDDALFELEQAVRLDPTNALAWSYLGQVRFQRKEYEEALAALSRAVERDPSR 282

Query: 359 --EIFLLLAQIEQANSHNTDKILYWTQSAL 386
             E +  L ++        ++  Y    A+
Sbjct: 283 YPEAYFYLGRV-YMERGEYEEARYNLSKAV 311



 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 80/261 (30%), Gaps = 15/261 (5%)

Query: 84  GYKALYTGLM--SIAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQY 136
            Y AL        I A +   AR +           +      Y +Y     I   +   
Sbjct: 104 AYVALAQAYTDQYINARDREAARALLDQALLVLNDAERINPEYYAIYNQRGLIYQYKGDP 163

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A E  E  L I       +Y+L   +  +G L+ A     +A+ ++P   +V      
Sbjct: 164 EKAAEAFEKALSINNEDPIVLYNLALTNLSLGRLDEALSLLKRAVAVAPQDSYVRARYGA 223

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              +      A+  L Q  +         A+           + +   +      +++  
Sbjct: 224 LLAVKGRLDDALFELEQAVRLDPT----NALAWSYLGQVRFQRKEYEEALAALSRAVERD 279

Query: 257 DNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLK 312
            +    +     +  + + +  +A   L K   ++P       +    +E   +  G   
Sbjct: 280 PSRYPEAYFYLGRVYMERGEYEEARYNLSKAVVLDPANAEYRYWLGHANEKLGDMEGAAA 339

Query: 313 RALRLEEINKESVESLVIVSK 333
           +  +  E+  +  E+   +++
Sbjct: 340 QYKKAIELRPDYPEAREGLAR 360


>gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489]
 gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
           succinifaciens DSM 2489]
          Length = 887

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 98/322 (30%), Gaps = 79/322 (24%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A+  R +  A    + +L+        + SL     + GD   A  Y ++ + I  
Sbjct: 14  RANAAILSRDFEQAARIYKGLLKSDPQNIELLSSLGNLYVKSGDDEKALAYFSEIIRIDS 73

Query: 186 DAPWV----------------TEAVVQQYVLA------------------KEWSRAITFL 211
                                + +V++Q V++                   ++  A+   
Sbjct: 74  KNVEALNSLGGIYRRLKKYDDSISVLEQAVISDESNVQSFYNLGFTFKLMGKYDDALNCF 133

Query: 212 NQKKKNAKE---------------WNRNRAI---------------LLIARSLENADKGD 241
           N+  +   E                    A+               L +  +      G+
Sbjct: 134 NRVVEENPEDVLAFNHIGSIYALKNQNKDAVSSYLRGLKIDPNHPILHLNLAKSYDALGE 193

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIA 296
              +  +   +LK     + A    A  L+ +NK R A  ++     +NP     H ++ 
Sbjct: 194 FEKAQAEYEAALKTKPGWLEAIENYADLLLKKNKTRNAGELVRHALNLNPKDAAMHTKLG 253

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++YT   S+    +++    L +I  E  ++L  ++      G  + A          +P
Sbjct: 254 DVYTK-QSDFDNAEVEYNEAL-KIRPEFPKALSGLASAYESTGRNEDALEIMGRMENASP 311

Query: 357 --------RKEIFLLLAQIEQA 370
                      I L   +IE+A
Sbjct: 312 EDSSMLCQYAHILLSADRIEEA 333


>gi|312071553|ref|XP_003138661.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
           [Loa loa]
 gi|307766175|gb|EFO25409.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
           [Loa loa]
          Length = 1205

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 55/179 (30%), Gaps = 20/179 (11%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  E+       +A     KAL + P        +        +   A     +  +  
Sbjct: 484 GLVSEA------EAAYN---KALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIY 534

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E+    A      +     +G +  + +   E++++      A      +L        
Sbjct: 535 PEF----AAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGG 590

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           A     +  ++NP     H  +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 591 ALQCYTRAIQINPGFADAHSNLASI--HKDSGNVPEAIQSYSTALKLKPDFPDAFCNLA 647



 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A       L +         +L       G ++ A     KA+D+ P+ P     +  
Sbjct: 419 DRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLAN 478

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                   S A    N+  +       ++  L    +    ++G +  +    +++L++ 
Sbjct: 479 ALKEKGLVSEAEAAYNKALQLCPTHADSQNNL----ANIKREQGKIEDATRLYLKALEIY 534

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311
                A    A  L  Q K + A    ++  ++ P    A+ Y+++ +      +  G L
Sbjct: 535 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT--FADAYSNMGNTLKEMGDVGGAL 592

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   R  +IN    ++   ++ I  + G++ +A      A+K+ P 
Sbjct: 593 QCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQSYSTALKLKPD 638



 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 13/227 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G++  A  +  KA+ + P+       +      A+ + RA+    +    A     N 
Sbjct: 380 AQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLAG----NH 435

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A++    +    ++G +  +     +++ L  N   A    A +L  +    +AE    K
Sbjct: 436 AVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAAYNK 495

Query: 286 IWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             ++ P H +    +ANI           +L     L EI  E   +   ++ I  + G 
Sbjct: 496 ALQLCPTHADSQNNLANIKREQGKIEDATRLY-LKAL-EIYPEFAAAHSNLASILQQQGK 553

Query: 341 IDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +  A      A++IAP   + +  +    +    +    L     A+
Sbjct: 554 LQDAINHYKEAIRIAPTFADAYSNMGNTLK-EMGDVGGALQCYTRAI 599



 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   Q    H +    L    I   + +   A       L+I      A 
Sbjct: 484 GLVSEAEAAYNKALQLCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 541

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ I+P        +        +   A+    +  + 
Sbjct: 542 SNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGGALQCYTRAIQI 601

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 602 NPGF----ADAHSNLASIHKDSGNVPEAIQSYSTALKLKPDFPDAFCNLAHCL 650


>gi|262304973|gb|ACY45079.1| acetylglucosaminyl-transferase [Cryptocellus centralis]
          Length = 290

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 73/184 (39%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A    ++  +++  P  A+
Sbjct: 66  EQGYIEEATCLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALQHYKEAIRIS--PSFAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 54/178 (30%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G ++ A+     AL + P        +            A     +  +   
Sbjct: 26  LANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATCLYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E+    A      +     +G +  +     E++++  +   A      +L      + A
Sbjct: 86  EF----AAAHSNLASVLQQQGKLNEALQHYKEAIRISPSFADAYSNMGNTLKEMGDIQGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A+I  H  S N    +       ++  E  ++   ++
Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197



 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 64/216 (29%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q + A E     L++  T   ++ +L       G +  A     KAL++ P+
Sbjct: 27  ANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATCLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  + +  +    A           + GD+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALQHYKEAIRISPSF----ADAYSNMGNTLKEMGDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   PE  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PEFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +  G++K+            RL  ++   
Sbjct: 201 QIVCDWSDYEGRMKKLVSIVADQLDKNRLPSVHPHH 236


>gi|194751742|ref|XP_001958184.1| GF23653 [Drosophila ananassae]
 gi|190625466|gb|EDV40990.1| GF23653 [Drosophila ananassae]
          Length = 931

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 36/198 (18%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 686

Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                          +     + LK C  SI   I +A     +
Sbjct: 687 LLVEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTQGLKKCPTSIPLWILSANLEERK 746

Query: 274 NKKRKAEVILEKIWKVNP 291
               KA  ILE+    NP
Sbjct: 747 GVLTKARSILERGRLRNP 764



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|332304873|ref|YP_004432724.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172202|gb|AEE21456.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 916

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 19/232 (8%)

Query: 133 ERQYNIAHEKLEMML-----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           +     A E +E            TR      L   S    D         +AL+ SP+ 
Sbjct: 378 QGNVKEAKELVEKSSGISTSAEDLTRL----GLLKLSLNNLDGIVNL---EEALEKSPEL 430

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               + +   Y+  K++ +AI    Q K+  ++ N   A LL         +     +  
Sbjct: 431 ESAKKTLATAYITTKQYDKAIELSEQWKR--EDPNDISAYLLAGEVFSKQQE--RTKAKG 486

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIY-THLLS 304
           +  + L++      A++      I++    +A+  L  + K  P   P +A  Y      
Sbjct: 487 EFQQVLEIDPEHKGAALGLVNIAIAEKDYSQAQSGLSNLLKRYPDYTPALATSYLLSKQQ 546

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             T   ++   +      ++ + +++ +++ L     D A  +     + +P
Sbjct: 547 GKTEQGIELIKQAVAKAPDNQQVIMLYARVLLLEQQYDLALQQFAKVEQASP 598



 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 9/158 (5%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + + +  +      N+    ++  +  +     + A    + +LQ       A+ +L + 
Sbjct: 753 QALSAIQAHLEKAPNDGAALMMLAERQINSGD-DEAVASYQTLLQKNPNNFVALNNLAYL 811

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAK 219
             +   L  A +YA KA+   PD     +   Q  V  K++ +A+      +N   +N +
Sbjct: 812 YLQQNKLEDALQYAEKAVKQRPDNAAAVDTYAQVLVAKKDYKKAVQQYDAVVNDDMQNEE 871

Query: 220 EW-NRNRAILLIAR---SLENADKGDMIASYHDAIESL 253
            + N   A+ L      +    ++ +M +  + A ++ 
Sbjct: 872 IYLNYVEALFLDGSNLLAKRKLERREMKSEENIARQAQ 909



 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 24/205 (11%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               D  SA      A+ ++P +P     + + Y+  K++  A   L++  +    ++  
Sbjct: 35  IAQNDNASAIISLKTAVQLAPKSPEARFELGKVYIEEKQFESAEKELSRALEYG--YDGA 92

Query: 225 RAILLIARSLENADKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAE 280
           + + L+ R+ +       I+   D   +L    K              SL+  NK   A 
Sbjct: 93  KVLPLLTRAYQRTGAYAAISEMEDTNVNLSNEEKAEIGFFKVV-----SLVRLNKPDDAR 147

Query: 281 VIL--------EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            I+        + ++K      ++ +Y+ +L +     L+   +L+  + +  E L + +
Sbjct: 148 AIIADQGQLETDSVFKS-----LSQVYSDILDKAYPLALQNITQLKAEHPDHPEVLKLAA 202

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
           ++ L +     A  +    + + P 
Sbjct: 203 QLHLSLQDPKAAAQEFDHYVSLYPD 227



 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 104/302 (34%), Gaps = 11/302 (3%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           IA ++ P A+K  + +  Q+  ++  L  L+    A  ++ +  A + L ++        
Sbjct: 274 IADNDFPEAQKY-AELGIQNGVNDPSL-RLIAGYAAYQQKDFESAQQHLSLVASNLPGNH 331

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +  L     ++G    A     +   +S     +      + +       A   + + 
Sbjct: 332 PGLRLLAASQLQLGLNTEAGDVLERIEQVSEQDAQLFSKASYELLRQGNVKEAKELVEKS 391

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
              +        + L+  SL N D    +       E+L+       A    A + I+  
Sbjct: 392 SGISTSAEDLTRLGLLKLSLNNLDGIVNLE------EALEKSPELESAKKTLATAYITTK 445

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR---ALRLEEINKESVESLVIV 331
           +  KA  + E+  + +P+   A +    +      + K      ++ EI+ E   + + +
Sbjct: 446 QYDKAIELSEQWKREDPNDISAYLLAGEVFSKQQERTKAKGEFQQVLEIDPEHKGAALGL 505

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             IA+      QA +     +K  P     L  + +       T++ +   + A+   PD
Sbjct: 506 VNIAIAEKDYSQAQSGLSNLLKRYPDYTPALATSYLLSKQQGKTEQGIELIKQAVAKAPD 565

Query: 392 PL 393
             
Sbjct: 566 NQ 567


>gi|262304979|gb|ACY45082.1| acetylglucosaminyl-transferase [Daphnia magna]
          Length = 289

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 70/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P  P     +        +   A    +   +         A  L   +    
Sbjct: 10  RRAIELQPHFPDAYCNLANALKEKGQVQDAEDCYSTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +  +   A    A  L  Q K  +A +  ++  ++   P  A+
Sbjct: 66  EQGFIEEATRLYLKALDVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ--PSFAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   +S   +    H + L  L    I   +     A       L +      A 
Sbjct: 34  GQVQDAEDCYSTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPDFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++ + A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALMHYKEAIRIQPSFADAYSNMGNTLKEMQDINGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G +  +      +LKL  +   A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGQIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200


>gi|153082755|ref|NP_001538.4| interferon-induced protein with tetratricopeptide repeats 2 [Homo
           sapiens]
 gi|124488|sp|P09913|IFIT2_HUMAN RecName: Full=Interferon-induced protein with tetratricopeptide
           repeats 2; Short=IFIT-2; AltName: Full=ISG-54 K;
           AltName: Full=Interferon-induced 54 kDa protein;
           Short=IFI-54K
 gi|386836|gb|AAA59191.1| ISG-K54 [Homo sapiens]
 gi|55958474|emb|CAI12238.1| interferon-induced protein with tetratricopeptide repeats 2 [Homo
           sapiens]
          Length = 472

 Score = 45.7 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 26/207 (12%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     H +I   Y          + K    +  + +  +     + ++      I
Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI 367
             A A    A +       +  +LA +
Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASL 343


>gi|300702622|ref|YP_003744222.1| hypothetical protein RCFBP_10264 [Ralstonia solanacearum CFBP2957]
 gi|299070283|emb|CBJ41575.1| conserved protein of unknown function, tpr repeat domain [Ralstonia
           solanacearum CFBP2957]
          Length = 700

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G    +     + + + PD       +       +   RA +   Q  +    +   
Sbjct: 126 QEAGKFAESLDCLERVIALQPDGAQAHNNLANTLRRLEHLERAESHYRQALELDPAY--- 182

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A      +   + +G    +   A  +++L    + A +  A++ I +++   A  +L+
Sbjct: 183 -AEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAEAEIGRHRHEAALRVLD 241

Query: 285 KIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           ++    P HP    A        E     L  A +   +   S E+   ++     +G  
Sbjct: 242 RLSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQT 301

Query: 342 DQAHAKAMLAMKI 354
           D+A      A ++
Sbjct: 302 DEALPHFEQAARL 314



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 43/230 (18%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            RI   + A   A +A+ ++P +     A+        +   A+    Q  +       +
Sbjct: 262 RRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQTDEALPHFEQAARLPGAVAED 321

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               L+ R++   + G   A+     ++L+    S+      A++  +  +  KA     
Sbjct: 322 ---ALVGRAILLMEAGRRDAALAAFDQALEQFPGSV-----QARAGRADARTFKAGD--- 370

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                   P+IA +   L         +R+LR      + + +   + K  L++    +A
Sbjct: 371 --------PDIAALQACLADGE-----RRSLR------DQISAHFALGKAYLDLQDPARA 411

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393
                   +       +            +      W      A  P+P 
Sbjct: 412 FHHLDAGNRQKRSTFTY------------DGAASSRWMARIADAFPPEPH 449



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 79/266 (29%), Gaps = 31/266 (11%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A       L++      A  +L F     G  + A   A  A+++SP        + +
Sbjct: 166 ERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAE 225

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +       A+  L++       +       L AR+           +   A +++ L 
Sbjct: 226 AEIGRHRHEAALRVLDR----LSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALA 281

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
            +S       A +L +  +  +A           PH E A      ++E+ +  + RA+ 
Sbjct: 282 PHSAETHHALAMALQALGQTDEAL----------PHFEQAARLPGAVAEDAL--VGRAIL 329

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQA--------HAKAMLAMKIAPRKEIFLL-LAQI 367
           L E  +         +  A +                A A       P        LA  
Sbjct: 330 LMEAGRRDA------ALAAFDQALEQFPGSVQARAGRADARTFKAGDPDIAALQACLADG 383

Query: 368 EQANSHNTDKILYWTQSALHAMPDPL 393
           E+ +  +     +    A   + DP 
Sbjct: 384 ERRSLRDQISAHFALGKAYLDLQDPA 409


>gi|291614515|ref|YP_003524672.1| tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291584627|gb|ADE12285.1| tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 386

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 9/129 (6%)

Query: 160 LYFESCRIGDLNSA--QRYATKAL-DIS--PDAPWVTEAVVQQYVLAKEWSRAITFLNQ- 213
           L+  +    D   A     A  A  ++   P      + +++ Y   K+W +AI    + 
Sbjct: 106 LFELAQ---DYLKAGILDRAEAAFLELHGTPYEKESLDFLLEIYQKEKDWLKAIDIGQRL 162

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                +   +  A      +          A+     ++L +   S+ ASI      +S 
Sbjct: 163 TALTGEPHGKEAAFFFCELAAGELAAKQTEAAVVHLEQALNVNPQSVRASIMLGDIELSA 222

Query: 274 NKKRKAEVI 282
              ++A  +
Sbjct: 223 GGAQRAIEV 231


>gi|254788153|ref|YP_003075582.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237686893|gb|ACR14157.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
           T7901]
          Length = 791

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 110/311 (35%), Gaps = 26/311 (8%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A+  G + +A H+   A ++     +Q     +    L +   A AE  + +A+E     
Sbjct: 369 AVLQGDLLLAKHDGAGAIRVLRTALRQVAVDADVFAALAKAHRAQAE--FELANEYFAKA 426

Query: 147 LQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           ++ P   +    Y+ +        L+ +++   + +  +  +  V   + Q  +  ++W 
Sbjct: 427 VRAPDGIKYAVDYAQFL--LEQKKLSLSEQILQQLILRNRGSERVLNLLAQVKLAKEQWQ 484

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A    +Q ++   E      ++   R +  + KGD   +        KL  +S+ + + 
Sbjct: 485 EAEMIADQMQQIEGE----DTVVAYIRGMAASGKGDNEGAIAAMENLQKLSPDSMRSMVL 540

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY--------THLLSENTVGKLKRALRL 317
              + I   ++ +AE  L ++   +P     N Y         HL        ++   + 
Sbjct: 541 LVDAYIKAGQRDEAETFLNRVIATDP-----NSYTGYFLRGNLHLYFGEAEPAVRDYQQA 595

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTD 376
            + + +   +   ++K+ L +G +  A       ++  P  E      A++ +       
Sbjct: 596 IKNDPKKEGAYNALAKLNLRLGKVADAERVLSQGVRRLPDSETLTAFRAELHRRAGELDQ 655

Query: 377 KI---LYWTQS 384
            +         
Sbjct: 656 AVAMYRALLAR 666



 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 88/286 (30%), Gaps = 14/286 (4%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A   G+ +    +   A  + +  + Q    +     +L V   +   Q + A   L  +
Sbjct: 504 AYIRGMAASGKGDNEGA--IAAMENLQKLSPDSMRSMVLLVDAYIKAGQRDEAETFLNRV 561

Query: 147 LQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +           +          G+   A R   +A+   P       A+ +  +   + 
Sbjct: 562 IATDPNSYTGYFLRG--NLHLYFGEAEPAVRDYQQAIKNDPKKEGAYNALAKLNLRLGKV 619

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A   L+Q  +   +     A     R+  +   G++  +       L   D+  + + 
Sbjct: 620 ADAERVLSQGVRRLPDSETLTAF----RAELHRRAGELDQAVAMYRALLARNDSLDVVAN 675

Query: 265 CAAKSLISQNKKRKAEVILEKI--WKVNPHPEIANI--YTHLLSENTVGKLKRALRLEEI 320
             A +LI+       +  L+    ++ +  P+  +   + ++L+      L    R    
Sbjct: 676 NLASTLITLGGADNLQSALQVAARFRTSKVPQFLDTLGWAYVLNNQLDDGLSLLRRASLK 735

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
             +  E    +++          A  +   A+        +   A+
Sbjct: 736 LPDEPEIAYHLAEGYFRNQDYTNAKIQVDEALAKGTDSLSWYTTAE 781



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 58/252 (23%)

Query: 151 ATRE---FAVYS----LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            TR      +      L   S    +   A+    +    +P    +        +   +
Sbjct: 327 ETRLTVDAGLRKGRLELMNNSLSDAEKTIARL--EELDANNPKVAVLQG---DLLLAKHD 381

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            + AI  L    +         A +  A +  +  + +   +     ++++   + I  +
Sbjct: 382 GAGAIRVLRTALRQVAV----DADVFAALAKAHRAQAEFELANEYFAKAVR-APDGIKYA 436

Query: 264 ICAAKSLISQNKKRKAEVIL-----------------------EKIWKVNPHPEIANIYT 300
           +  A+ L+ Q K   +E IL                       ++ W+      IA+   
Sbjct: 437 VDYAQFLLEQKKLSLSEQILQQLILRNRGSERVLNLLAQVKLAKEQWQEAE--MIADQMQ 494

Query: 301 HLLSENTV----------------GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  E+TV                G +     L++++ +S+ S+V++    ++ G  D+A
Sbjct: 495 QIEGEDTVVAYIRGMAASGKGDNEGAIAAMENLQKLSPDSMRSMVLLVDAYIKAGQRDEA 554

Query: 345 HAKAMLAMKIAP 356
                  +   P
Sbjct: 555 ETFLNRVIATDP 566


>gi|206560967|ref|YP_002231732.1| putative porphyrin biosynthesis related protein [Burkholderia
           cenocepacia J2315]
 gi|198037009|emb|CAR52930.1| putative porphyrin biosynthesis related protein [Burkholderia
           cenocepacia J2315]
          Length = 395

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 48/409 (11%), Positives = 113/409 (27%), Gaps = 45/409 (11%)

Query: 2   LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR I +  V+  +  +   V       V + +       S  + +  +         L  
Sbjct: 3   LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           + R     P  +     +   +K   +L   + ++ A     A K               
Sbjct: 63  IVRNIWRMPQRVAAYRARARNEKAQASLRDAIANLYAGRFSRAEKAAREA---------- 112

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                           N+    L          E+     +       +   A+  A   
Sbjct: 113 -----------LTVDANLGAASLVAATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAAD 161

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +           A +       +   A     + ++  K W     +       E     
Sbjct: 162 MRADARDADGALAALADMQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221

Query: 241 DMIASYHDAIESL----KLCDN--------SIMA-------SICAAKSLISQNKKRKAEV 281
             +     A E+L    +   +                   +  AA+ L+   ++ +A  
Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARR 281

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           I+E     N    +   Y      + +  +++A   ++ + E  + L  + ++  +    
Sbjct: 282 IVEDALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLW 341

Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +A +    A+K+A  +         LA++ +          ++ +SAL
Sbjct: 342 GKAQSFLESALKLADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390


>gi|299068043|emb|CBJ39257.1| conserved exported protein of unknown function (TPR-like)
           [Ralstonia solanacearum CMR15]
          Length = 640

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 6/191 (3%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A   A   ++++P +    +      V   +WS     L  +        R  AIL 
Sbjct: 137 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 196

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288
           + + +      D   +   A++ L   D     +  A A++ +       A   L+   K
Sbjct: 197 LQQQMSK--SSDPAGAV-SALQHLTTHDTQRPETHLALARAKVVAKDNTGALSELDTALK 253

Query: 289 VNP-HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           + P + + A +   L ++ +    +       +    S++  + ++++ L     DQA A
Sbjct: 254 LRPGYEDAAILAAELRADNDPDAAIGGLRTFLKAAPASIDGHLALARMYLVRNQNDQARA 313

Query: 347 KAMLAMKIAPR 357
           +     KIAP 
Sbjct: 314 EFEALRKIAPT 324



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 5/142 (3%)

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +   A   ++L   S+ A       +++  +  + E +L+         + A     
Sbjct: 137 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 196

Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           L      S +  G +     L   + +  E+ + +++  +       A ++   A+K+ P
Sbjct: 197 LQQQMSKSSDPAGAVSALQHLTTHDTQRPETHLALARAKVVAKDNTGALSELDTALKLRP 256

Query: 357 RKEIFLLLAQIEQANSHNTDKI 378
             E   +LA   +A++     I
Sbjct: 257 GYEDAAILAAELRADNDPDAAI 278


>gi|225872021|ref|YP_002753475.1| serine/threonine-protein kinase [Acidobacterium capsulatum ATCC
           51196]
 gi|225794490|gb|ACO34580.1| serine/threonine-protein kinase [Acidobacterium capsulatum ATCC
           51196]
          Length = 814

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 91/303 (30%), Gaps = 57/303 (18%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIG-----DLNSAQRYATKALDISPD 186
             + A E  E + +           L   + +  R G      + +A+R   KAL I P 
Sbjct: 501 DLDRAREMFEQVTEREPEYAPGWSGLGVTHMQYTRHGFGGHMHIMAARRAFDKALQIDPG 560

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           +       +   +   E   A   +      +K        +L    L     G    + 
Sbjct: 561 SADANLYRIYMLLARGEKESARHGIEDML--SKSARNWNVHVLAGTMLRL--DGMYDEAL 616

Query: 247 HDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304
                +L L  +         A+    QN+   AE  L+K   + P HP +        +
Sbjct: 617 EQFHLALNLNPSGAPMIYNHRARVYQYQNQLDLAEGELQKGLTLEPRHPLL-------RT 669

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIFL 362
                ++++           +E  + + +  L  +          AM  ++I  R+    
Sbjct: 670 SLAYQRMRQ---------GQLEEAIAMMEAVLKDDTSLRIIYPTLAMCYVQIGQRERGAT 720

Query: 363 L-----LAQIEQ------------ANSHNTDKILYWTQSALHA--------MPDPLWISD 397
           L     +A  E             A   +  + L+W + A++           +P W   
Sbjct: 721 LIEESSMAAAEADSEMAYRLATYFAVDGDESEALHWLRRAIYLGNENYPWFSRNPAWNKL 780

Query: 398 DGY 400
            G+
Sbjct: 781 RGH 783


>gi|298492898|ref|YP_003723075.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
 gi|298234816|gb|ADI65952.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 371

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 20/222 (9%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVT-------EAVVQQYVLAKEWSRAITFLNQK 214
            +    GD   A     +A+ ++ +              + +      ++ +    L   
Sbjct: 11  VQKNLYGDYEGAITVFNEAIQLNCNLAEAYYHRGYSCLELAEFNQAIADYQQVTKILKNS 70

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K A   N   A     R L     GD  ++  D  E+LK     I A       L    
Sbjct: 71  AKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYSNRGNILHILG 130

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENT------VGKLKRALRLEEINKESVESL 328
           K  +A     +  ++NPH  +A  Y H    +        G +    +  EIN    E+ 
Sbjct: 131 KYTEAISDYNQAIQLNPH--LAAAY-HNRGNSRYALQDYQGAIADYNQALEINPNFGEAY 187

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
                +   +     A A    A++  P      + A +E+ 
Sbjct: 188 YNRGLVMSHLQDYQGAIADFNQAIQQDPED----IQAYLERG 225


>gi|269140722|ref|YP_003297423.1| cellulose synthase operon C domain protein [Edwardsiella tarda
           EIB202]
 gi|267986383|gb|ACY86212.1| cellulose synthase operon C domain protein [Edwardsiella tarda
           EIB202]
 gi|304560503|gb|ADM43167.1| Cellulose synthase operon protein C [Edwardsiella tarda FL6-60]
          Length = 1153

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 77/253 (30%), Gaps = 54/253 (21%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y+A  TGL   AA N   A+ +     +QH    E L  L   Q    +     A    E
Sbjct: 272 YRARSTGLAQAAAGNDSQAQPLLQQTLRQHPNDAETLGAL--AQTYSQQGDRPRAIALFE 329

Query: 145 -MMLQIPATREFA-VYSLYF-----ESCRIGDLN-SAQRYA------TKALDISPDAPWV 190
             +   P + + +   SL          + GD   +A +YA       +A  +  +  + 
Sbjct: 330 RAIAADPHSDQLSKWQSLLKTNRYWLLIKQGDEALAAHQYALAQQKYRQAQALDGENAYG 389

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAK----------------------------EWN 222
              +        + ++A        +                                  
Sbjct: 390 PIGLGDVAAAQGDLAQAEQSYRLALRRDPLNGSALRKLVSLYQQQSPDKALAYLQQLPAA 449

Query: 223 RNRAILLIARSLENADKGDMIA----------SYHDAIESLKLCDNSIMASICAAKSLIS 272
           + RA+      L++       A          +     E+ +L  + +  +   A +L+S
Sbjct: 450 QRRAMQSSYSELQSDALQQQAAALAGRQAWGPALEKLNEAQRLTPDDVWLNYRLAGTLVS 509

Query: 273 QNKKRKAEVILEK 285
             +  +A+ ++++
Sbjct: 510 AGQPERADALMQR 522



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 20/235 (8%)

Query: 63  RFFLSCPAM--LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           R   + P    L         ++ +  +  G  ++AAH   LA++ +         +   
Sbjct: 330 RAIAADPHSDQLSKWQSLLKTNRYWLLIKQGDEALAAHQYALAQQKYRQAQALDGENAYG 389

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            + L +V  A        A +   + L+       A+  L     +    + A  Y  + 
Sbjct: 390 PIGLGDVAAAQ--GDLAQAEQSYRLALRRDPLNGSALRKLVSLYQQQS-PDKALAYLQQL 446

Query: 181 LDISPDAPWVTEAVVQ---------QYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLI 230
                 A   + + +Q              + W  A+  LN+ ++    +   N  +   
Sbjct: 447 PAAQRRAMQSSYSELQSDALQQQAAALAGRQAWGPALEKLNEAQRLTPDDVWLNYRLAGT 506

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             S    ++ D +    D   S +            A  L S+ +  +A+ +L +
Sbjct: 507 LVSAGQPERADALMQRMDQRFSHRGDQ-----VYARALYLSSRGQPDQAQAVLRR 556


>gi|159110809|ref|XP_001705647.1| Hypothetical protein GL50803_113023 [Giardia lamblia ATCC 50803]
 gi|157433735|gb|EDO77973.1| hypothetical protein GL50803_113023 [Giardia lamblia ATCC 50803]
          Length = 315

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 80/214 (37%), Gaps = 33/214 (15%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G+   A   A +AL +  + P V +++ + + +A ++ +A +              
Sbjct: 31  KLEAGNFAKALTIAERALPLC-NQPSVLDSLGEIFSVAGDFQKATSC------------- 76

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                  A++L            +  +  +    +++ ++I   +   S  + R +  IL
Sbjct: 77  ------YAKALGYDHLTHAAGVRYMTLYEITGDPSNLNSAIGIFRKHTSTEESRTSL-IL 129

Query: 284 EKIWKVNPHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                      +A+ Y   L   +T   ++ A     +N   +E  + ++   L   S D
Sbjct: 130 ALA-------TLADAYLTRLDPPDTKAAIRTAKEAISMNPSFIEPHISLAGAHLVAESFD 182

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
            A   A+ A+++  ++  +    +IEQA   + +
Sbjct: 183 LAEKAALCALELMEQRGFY----KIEQAEDGSEE 212


>gi|54298485|ref|YP_124854.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
 gi|53752270|emb|CAH13702.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
          Length = 577

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%)

Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  Q      E     A    E  + Q P  T       L +   ++GD+ +A  Y  +A
Sbjct: 8   LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             I+P+   +   +   Y  A +   AI +  Q  +   E+ +    L    +L N    
Sbjct: 66  KKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
           +   + H  + ++    +   A       L+   +   A+     +  +NP H E A  Y
Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPKHRE-AQFY 180

Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               HL         +   ++ E + E V+SL+ +  IAL+      A      A+ + 
Sbjct: 181 LGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239


>gi|159110588|ref|XP_001705547.1| Hypothetical protein GL50803_4883 [Giardia lamblia ATCC 50803]
 gi|157433633|gb|EDO77873.1| hypothetical protein GL50803_4883 [Giardia lamblia ATCC 50803]
          Length = 1459

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 20/178 (11%)

Query: 80  NYDKGYKALY-TGL-MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
           N D+   A     L ++  A     AR        +     E      E + A   R+  
Sbjct: 382 NRDRALSAKSLRSLRVAAKADTDKKARAAEQARRDEEARAAEQARRDEEARAAEQARRDE 441

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-----KALDISPDAPWVTE 192
            A    E   +    R         ++ R  +  +A++ A      +A + +        
Sbjct: 442 EARAA-EQARRDEEARAA------EQARRDEEARAAEQ-ARRDEEARAAEQARRDEEARA 493

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           A  +Q    +E   A      ++  A E  R       AR+ E A + +   +   A 
Sbjct: 494 A--EQARRDEEARAAEQARRDEEARAAEQARRD---EEARAAEQARRDEEARAAEQAR 546


>gi|238027557|ref|YP_002911788.1| Flp pilus assembly protein TadD contains TPRrepeats [Burkholderia
           glumae BGR1]
 gi|237876751|gb|ACR29084.1| Flp pilus assembly protein TadD contains TPRrepeats [Burkholderia
           glumae BGR1]
          Length = 284

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             LL      A  Q + + +    +L  P         L   +   GD   A +   +A 
Sbjct: 91  TRLLRADALRATSQLDASEQAYTQLLNTP-LAARGYRGLGLIAGARGDFARAAKLLEQAT 149

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P        +    + A +   A   L +      E +     ++   +L     G 
Sbjct: 150 LLAPTDAAALSDLAYARMRAGDPGGARVPLMKA----AELDHRNPRIMSNLALFLMASGH 205

Query: 242 MIASY 246
              + 
Sbjct: 206 PENAQ 210


>gi|115378511|ref|ZP_01465668.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364480|gb|EAU63558.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
          Length = 1034

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 9/225 (4%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQ--KKKNAKEWNRNRAI 227
             A    T A  +SP+ P     + +    L ++ S A+  +    K K+  +  R+R  
Sbjct: 616 EKALNMYTNARKLSPEHPLARIGMAESQLALDQDLSLALADMEALGKSKDLVDPLRSRQQ 675

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+  R L    + D   +         L  +  +A   A +   +  K  +A+   E   
Sbjct: 676 LIQGRLLTELGRYDEALALLAQGVKGPLAFDFHLALGDAGR---AAGKLEEAQQAYEAAL 732

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           K+ P  E A      L    + + +    L  ++ E  +  ++ +   +      +A A+
Sbjct: 733 KLQPRSEDA---REGLGRTLLDRDRVKEVLARLDGEGRKVALVRAAAHVRQEDWKRARAE 789

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
                         +    +      N D+     + A++ +  P
Sbjct: 790 LEKTRVNNRYPLEAVGYLALADTMEGNGDQAREILEKAVNGVKKP 834


>gi|326804297|ref|YP_004322115.1| LPXTG-motif cell wall anchor domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651400|gb|AEA01583.1| LPXTG-motif cell wall anchor domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 926

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 4/71 (5%)

Query: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480
           + P   P+   +  +    E   P     +  +  KK   P +      +     P  P 
Sbjct: 763 QTPPDKPKKPETPPVTPPDEPKKPETPPVTPPDEPKKPETPPVTPPDKPKK----PETPP 818

Query: 481 IRQPDDPGIKE 491
           +  PD P   E
Sbjct: 819 VTPPDKPKKPE 829



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 4/70 (5%)

Query: 422 IPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI 481
            P   P+   +  +    +   P     +  +  KK   P +      +     P  P +
Sbjct: 792 TPPDEPKKPETPPVTPPDKPKKPETPPVTPPDKPKKPETPPVTPPDEPKK----PETPPV 847

Query: 482 RQPDDPGIKE 491
             PD P   E
Sbjct: 848 TPPDQPKRPE 857


>gi|220918792|ref|YP_002494096.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956646|gb|ACL67030.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 426

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 47/173 (27%), Gaps = 31/173 (17%)

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            ++ +  +   +     +AR  E   +GD   +      +L L            ++   
Sbjct: 2   ARRADGGDGVDDELAFHLARGTELLAQGDADRARAALERALDLGPKDAKVLALLGQACYR 61

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           Q +   A       W                            RL + N     + V + 
Sbjct: 62  QGQFDDAA----IAW---------------------------QRLVDENPVEPAARVNLG 90

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
              L+    ++A  +  +A+ + P     +    +    S +      W + A
Sbjct: 91  LAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGAREWFRKA 143



 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 2/135 (1%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G   +A  +   AR   +          +  V  L  Q    + Q++ A    + ++
Sbjct: 19  LARGTELLAQGDADRAR--AALERALDLGPKDAKVLALLGQACYRQGQFDDAAIAWQRLV 76

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                   A  +L     +      A+R    ALD++PD       +    + + + + A
Sbjct: 77  DENPVEPAARVNLGLAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGA 136

Query: 208 ITFLNQKKKNAKEWN 222
             +  +   +     
Sbjct: 137 REWFRKAGSDHMVAR 151


>gi|157812756|gb|ABV81123.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Lithobius forticatus]
          Length = 289

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   Q    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVAEAEECYNTALQLCPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIGSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A E     LQ+  T   ++ +L       G    A R   KAL++ P+
Sbjct: 27  ANALKEKGQVAEAEECYNTALQLCPTHADSLNNLANIKREQGFTEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIGSYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWSDYEVRMKKLVAIVADQLDKNRLPSVHPHH 236


>gi|104780088|ref|YP_606586.1| hypothetical protein PSEEN0860 [Pseudomonas entomophila L48]
 gi|95109075|emb|CAK13771.1| conserved hypothetical protein; TPR domain protein [Pseudomonas
           entomophila L48]
          Length = 574

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 87/264 (32%), Gaps = 11/264 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-DISPDAPWVT 191
            +Q++ A   L+ M++  A  + A  +L           +A R    AL    PD     
Sbjct: 300 TKQWDEAEGYLQEMVERDANADAAHLNLGRIREERHQPAAALR--EYALVGAGPDYLPAQ 357

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                  +     + A   L + ++   ++      L +  +    + G    +     +
Sbjct: 358 LRQADILIANGRSAEASRLLAEAREAQPDYAIQ---LYLIEAESLGNNGKEAQAAQVLEQ 414

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           ++K   + +      A     +N   + E  L  I    P   +A         +   + 
Sbjct: 415 AIKRYPDDLNLLYTRAMLAEKRNDLGQMEKDLRAIIAREPENAMALNALGYTLADRTTRY 474

Query: 312 KRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
             A  L     ++  +    L  +  +A  MG++D+A  +   A +  P  E+   L ++
Sbjct: 475 TEAKALIDKAHQLTPDDPAVLDSLGWVAYRMGNLDEAERQLRQAFERFPDHEVAAHLGEV 534

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
             AN    +    W      A PD
Sbjct: 535 LWANGKRREARQVW-GKGFEAQPD 557


>gi|237724004|ref|ZP_04554485.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265751305|ref|ZP_06087368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|229437668|gb|EEO47745.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|263238201|gb|EEZ23651.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 316

 Score = 45.7 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 49/268 (18%)

Query: 99  NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +   A++M         F      ++E     L         + + A   L+ M      
Sbjct: 32  DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91

Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +     ++  + Y +     D  + +    KAL +    P       +  +  K+   AI
Sbjct: 92  QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +     +++     +    R+           +  D  + L L  +   A +   +
Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            L + N+                 PE A                   ++  +N  + ++ 
Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++  ++ L     D+A A    A++I P
Sbjct: 233 ILSGELYLANKDFDKALAIYDEAIEINP 260


>gi|332298998|ref|YP_004440920.1| restriction endonuclease [Treponema brennaborense DSM 12168]
 gi|332182101|gb|AEE17789.1| restriction endonuclease [Treponema brennaborense DSM 12168]
          Length = 471

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 21/225 (9%)

Query: 157 VYSLYFESCRIGDLNS------AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           +Y L     + G+ ++      A R A K L   P        +   Y     W +A+  
Sbjct: 41  LYGLSALKKKKGENSAPKNKTAAIRDAVKRLAQDPHNAHALNVLSDLYYRDHAWEKALPL 100

Query: 211 LNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                  A+           + + +          +    + +L++   +   +   A++
Sbjct: 101 FELMLNIAEVHREIDLQQTSLRQGICALKLNRPQDALRGLLPALRMRPENFEVNYNLAQA 160

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEIN 321
                +  KA  +L+K   +N   E +++Y  L           + +  LKRA      N
Sbjct: 161 YYQCGEFEKAVPLLKKALMLN--REASDVYGLLGLSFYNLKKFRDALPYLKRA---LNEN 215

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            E+ E L  ++    + G  D+A    M  ++  P+      LA 
Sbjct: 216 PENKEVLFAMADSMQQSGFGDKAMKVFMH-LRPDPQFGAKSCLAA 259


>gi|157106778|ref|XP_001649477.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti]
 gi|108868774|gb|EAT32999.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti]
          Length = 793

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A   ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 67  GQVQEAEDCYNTALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 123

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ + A+    +  +
Sbjct: 124 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 183

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 184 INPAF----ADAHSNLASIHKDSGNIPDAIQSYRTALKLKPDFPDAYCNLAHCL 233



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +       N A  L   +    
Sbjct: 43  RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLCP----NHADSLNNLANIKR 98

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 99  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 156

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I  A      A+
Sbjct: 157 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPDAIQSYRTAL 216

Query: 353 KIAPR 357
           K+ P 
Sbjct: 217 KLKPD 221


>gi|289208395|ref|YP_003460461.1| hypothetical protein TK90_1216 [Thioalkalivibrio sp. K90mix]
 gi|288944026|gb|ADC71725.1| tetratricopeptide repeat protein [Thioalkalivibrio sp. K90mix]
          Length = 408

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 84/278 (30%), Gaps = 45/278 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  + +  +E     L    Q  L     + A      +   P     
Sbjct: 83  GEVDRAIRIHQNLVARPSLKDEQRAQALNELGQDFLLAGVLDRAEAVFRELADSPHQAVQ 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+  L                               + V +     +EW RAI    + K
Sbjct: 143 ALKGL-------------------------------QHVYETQ---REWERAIEVGTRLK 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +       R A      +    ++GD   S   A ++  L      A +  ++    ++
Sbjct: 169 AHNVPNEHLRIAHYHCELATIALEQGDRSTSAERAAQAEGLVPGLSRALLIKSEIAERED 228

Query: 275 KKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKL-KRALRLEEINKESVES 327
           +   A     +     P       P +  ++  L  EN +G+L +    L         +
Sbjct: 229 RIADAIACGREAVARTPPLAPLVVPRLERLHQALPGENRLGQLEQTLEDLANSR-GITVA 287

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
            + + ++    G +D A ++  + +   P     LL A
Sbjct: 288 RIALMRLYRRTGRLDAALSELGMILSQRPVPTSGLLEA 325


>gi|167033491|ref|YP_001668722.1| bacteriophage N4 receptor, outer membrane subunit [Pseudomonas
           putida GB-1]
 gi|166859979|gb|ABY98386.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 1001

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 15/139 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L       A      A      +         R  A       +   GD  +A+RY   
Sbjct: 495 RLPLAYALEAAGDSEAALPIWRSLPDSAWTDNARLTAARG----ALNAGDAGAARRYWD- 549

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A        W   A + Q     +   A+ F  Q   +    +   A    A+       
Sbjct: 550 AAAHRSADDWALGAAIAQR--QGDPQTALGFQRQALAHNPRADHYYAASSTAQL-----A 602

Query: 240 GDMIASYHDAIESLKLCDN 258
           GD   S     E++++  +
Sbjct: 603 GDSAQSTAWLAEAVRMAPD 621



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 7/131 (5%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           AA +   A  +   +       N  L      + AL       A    +      A    
Sbjct: 504 AAGDSEAALPIWRSLPDSAWTDNARLT---AARGALNAGDAGAARRYWDAAAHRSADDWA 560

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
              ++   + R GD  +A  +  +AL  +P A     A      LA + +++  +L +  
Sbjct: 561 LGAAI---AQRQGDPQTALGFQRQALAHNPRADHYYAASSTAQ-LAGDSAQSTAWLAEAV 616

Query: 216 KNAKEWNRNRA 226
           + A +  R RA
Sbjct: 617 RMAPDQPRYRA 627


>gi|157126009|ref|XP_001654491.1| pre-mrna splicing factor [Aedes aegypti]
 gi|108873417|gb|EAT37642.1| pre-mrna splicing factor [Aedes aegypti]
          Length = 931

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 19/164 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +  + E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GSRESLEALLQKAVAHCPKSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +L N +    
Sbjct: 627 ANPNSEDIWLAAVKLESENSEFERARRLLAKARASAPTPRVMMKSAKLEWALNNLED--- 683

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +     +++K+  +        AK  + + +  + + +LE+ 
Sbjct: 684 --ALSLLEDAVKVFPDF-------AKLWMMKGQIEEQKNLLERA 718



 Score = 40.3 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 15/190 (7%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              W+ +A          +  A    N                +  R+           S
Sbjct: 530 KQTWIDDA--DHCAKEGAFECARAVYNYALSEFPSKKS-----IWLRAAYFEKNHGSRES 582

Query: 246 YHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLL 303
               ++ ++  C  S +  +  AKS         A  IL   ++ NP+  +I      L 
Sbjct: 583 LEALLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEDIWLAAVKLE 642

Query: 304 SENTV-GKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLAMKIAPR-KE 359
           SEN+   + +R   L +    +    V++  +K+   + +++ A +    A+K+ P   +
Sbjct: 643 SENSEFERARRL--LAKARASAPTPRVMMKSAKLEWALNNLEDALSLLEDAVKVFPDFAK 700

Query: 360 IFLLLAQIEQ 369
           ++++  QIE+
Sbjct: 701 LWMMKGQIEE 710



 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +          
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEVNPLSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        +R    +  K 
Sbjct: 337 -------LEAARLQPPDTAKGVIAQAARHIPTSVRIWIKAADLETEVKARR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   E+    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPEDAKILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|108760387|ref|YP_631635.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464267|gb|ABF89452.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 1692

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 79/261 (30%), Gaps = 19/261 (7%)

Query: 148  QIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            + P     A+      +  R+ D + A     +AL+  P        + +        + 
Sbjct: 1000 RDPRGAIEALIGAAKLAVGRLNDADGATALYRQALEKDPLHAGAQAGLEELLAQRGGSAD 1059

Query: 207  AITFLNQKKKNAKEWNR----NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             +  L +++  AK   R         + A  L +    D   +     ++L        A
Sbjct: 1060 -LAALQERRAEAKLAQRDGLAAATAFVSAARLHHTALNDRARALALLEKALSAQPGHPEA 1118

Query: 263  SICAAKSLISQNKKRKAEVILEKIWK--------VNPHPEIANIYTHLLSENTVGKLKRA 314
                   L+   +  +A  +L +  +           H  + N+Y   L++ +       
Sbjct: 1119 LELRGALLLEAQQYPEAAAMLSQRVQLGGDPRVLAQFHMTLGNLYASHLNDPSRAAAHYQ 1178

Query: 315  LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQA 370
              L  +    +E+L  ++ +  +  +   A       ++      PR    L LA+    
Sbjct: 1179 TVLATL-PRHLEALERLAGLHTQARNWAGAVDCLHKLLQQELPPEPRARFTLELARTYDE 1237

Query: 371  NSHNTDKILYWTQSALHAMPD 391
               +        + AL   P 
Sbjct: 1238 GLGDAGAATPLYRRALELSPG 1258



 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 62/198 (31%), Gaps = 19/198 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             + D   A     + L +SP      +A+ + Y     W + +     + +++    + 
Sbjct: 590 ENLKDRAGAISAYERVLALSPSYLPALKALGRLYAQDGRWEKLVDMYRAESESSASTEQA 649

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A++     L          +     E+L L  +   A    A+   +Q           
Sbjct: 650 AALIYKIGELYEQRLNQDNEAIASYNEALMLAPSYFPALRALARIYRAQ----------- 698

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             W+      +  +     + N    L+RA  L +      E  ++  ++A++       
Sbjct: 699 AAWES-----LVEV-LRAEAANRTDPLERANALYQAAA-IWEEQLLRPELAIDTYQEVL- 750

Query: 345 HAKAMLAMKIAPRKEIFL 362
                 A  +   + ++L
Sbjct: 751 RLTPGHAATLRALERLYL 768



 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 85/274 (31%), Gaps = 26/274 (9%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  LA  +   + Q        L  L  +++A A+   + A E L    ++  TR    
Sbjct: 895  GDARLAFVLERGLRQ--AGDAAGLARLYTMRLASAQ-DADEALEMLLRTAELADTRF--- 948

Query: 158  YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                       DL  A     +AL++ P      +   +  +   +++ A   L  + + 
Sbjct: 949  ----------NDLERAAALYRQALELQPQCLPAMQGARRVALKRGDFAGARAALEAEARV 998

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN--- 274
            +++       L+ A  L      D   +     ++L+       A     + L  +    
Sbjct: 999  SRDPRGAIEALIGAAKLAVGRLNDADGATALYRQALEKDPLHAGAQAGLEELLAQRGGSA 1058

Query: 275  -----KKRKAEVILEK--IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
                 ++R+AE  L +            A    H    +    L    +         E+
Sbjct: 1059 DLAALQERRAEAKLAQRDGLAAATAFVSAARLHHTALNDRARALALLEKALSAQPGHPEA 1118

Query: 328  LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            L +   + LE     +A A     +++     + 
Sbjct: 1119 LELRGALLLEAQQYPEAAAMLSQRVQLGGDPRVL 1152


>gi|42522206|ref|NP_967586.1| putative O-linked GlcNAc transferase [Bdellovibrio bacteriovorus
           HD100]
 gi|39574737|emb|CAE78579.1| putative O-linked GlcNAc transferase [Bdellovibrio bacteriovorus
           HD100]
          Length = 348

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 133 ERQYNIA-HEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +   A  +  E +        T      ++     R GD + A+ Y  KA  ++P   
Sbjct: 137 SGRDQEALDKYFEALAVLTDETDTLFETYKNMGNIFVRQGDFDGAEEYYNKAYTMNPQ-- 194

Query: 189 WVTEAVV----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             ++ ++       V   ++ +++    +  +   E ++      +  ++ ++  GDM  
Sbjct: 195 --SDVLLVNFGTLEVQRGDYDKSLYCFRKAVEINPENDK----AWVGLAMVHSQFGDMEL 248

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           ++ +   ++ +   +  A   AA   +   K +KA   L+
Sbjct: 249 AWANIETAIDINPQNRTAVHLAANWGLRDGKLQKAIEALQ 288


>gi|117923878|ref|YP_864495.1| hypothetical protein Mmc1_0564 [Magnetococcus sp. MC-1]
 gi|117607634|gb|ABK43089.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 505

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 32/200 (16%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE--------------WSRA 207
            ES         Q +A +AL +         A++Q Y    +              W +A
Sbjct: 8   RESLEKAITLQQQGHAEEALLL-------YHALLQHYPKQADLYYLTGLAHQDLQQWPQA 60

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              L Q    A +  R+  +L +   L+  +      +     ++  L      A     
Sbjct: 61  CERLEQAV--ALDGQRSDFLLALGMVLQELEL--PEQAKQRYAQAALLDPQDYQAYYHIG 116

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINK 322
            S I   + R+A     +  K    P++   + +L      +    G L+      ++N 
Sbjct: 117 DSCIDLGQNRQAIEAFTQAIKCK--PDLQEAWLNLGLCLKAAGELPGALQAFTTALQLNP 174

Query: 323 ESVESLVIVSKIALEMGSID 342
           +  ++ V  +   L MG   
Sbjct: 175 DDAKAKVDYAMALLAMGDYA 194


>gi|320183851|gb|EFW58683.1| tetratricopeptide repeat protein [Shigella flexneri CDC 796-83]
          Length = 389

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      N    SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|293602941|ref|ZP_06685380.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292818735|gb|EFF77777.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 826

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 61/288 (21%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-----------LEVQIA 130
           ++G +AL  G +          R     +      + + L  L           L V+ A
Sbjct: 538 EEGTRALEEGRL----------RDAAERICAHRLLNPDALTALRAQRSFERAMRLGVRAA 587

Query: 131 LAERQYNIAHEK--LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           L    +    +   + +  ++      A+      +  +GD  +A R+  +A      AP
Sbjct: 588 LLAGNHKEVIDLTDIALDTRVDFPELDAMRG--RAADALGDKQTAMRHLEQAAAGE-AAP 644

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             T+    +      W              +  +  +A+L  A + + A           
Sbjct: 645 LSTQLYFARVAFNGGWFG------------EAIDAYKAVLANASADQTARD--------- 683

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---------PEIANIY 299
             E+ +        +I  A+ +++    R A  +LE++ +  P            IA +Y
Sbjct: 684 --EAERQLGRLGPRAIRGAREILAAGDHRGAWNLLERVAQSWPAMTEVEHEKRRIIAVLY 741

Query: 300 THLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                    +T  +L    ++ ++       L + +  A+ +   +QA
Sbjct: 742 AEARALDPASTTERLALGEKIVQLVPTDAIGLRLAAVGAMRLHRFEQA 789


>gi|284106837|ref|ZP_06386280.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283830016|gb|EFC34292.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 351

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 69/203 (33%), Gaps = 13/203 (6%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L ++  +   L++A     KA++I P        +   Y    +  +AI+      K  
Sbjct: 108 GLVYQHQKN--LDAAATVLKKAIEIYPRFADAQLNLAFAYDQLGDREQAISAYQAALKMD 165

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                ++   L   +     +GD   +  +             A +  A+       +++
Sbjct: 166 P----SQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQDAKAWLLLAQLAEKSLSEKQ 221

Query: 279 AEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A    EK   ++  P++        Y     +     +     +  +N    E+ + +  
Sbjct: 222 AIEAYEKALGIS--PDLLEAHYALGYLMQAQDQPQQAVNHFQEVVRLNPNHAEAQLNLGV 279

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
           +   +  +D+A A  + A+K+ P
Sbjct: 280 LLANLDKLDEAEAAYLAALKLNP 302



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 21/207 (10%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----------------GDMIASYHD 248
             A    NQ   +A      +A   + ++L+   +                     +   
Sbjct: 30  DEAQNLFNQGASHANNQEFQQAAKSLQQALDVFPRFAAAHHLLGVVSFTGLQQPDQAVTH 89

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSE 305
             ++++L  N   A          Q     A  +L+K  ++ P     ++   + +    
Sbjct: 90  LKKAVELHPNFARAYFDLGLVYQHQKNLDAAATVLKKAIEIYPRFADAQLNLAFAYDQLG 149

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL 364
           +    +       +++   + +L  ++ +    G  DQA  +        P   + +LLL
Sbjct: 150 DREQAISAYQAALKMDPSQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQDAKAWLLL 209

Query: 365 AQIEQANSHNTDKILYWTQSALHAMPD 391
           AQ+ + +      I  + + AL   PD
Sbjct: 210 AQLAEKSLSEKQAIEAY-EKALGISPD 235



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 50/145 (34%), Gaps = 8/145 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVT 191
                A    +  L++  ++  A+++L       GD + A +         P     W+ 
Sbjct: 149 GDREQAISAYQAALKMDPSQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQDAKAWLL 208

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A + +  L++   +AI    +    + +     A   +   ++  D      + +   E
Sbjct: 209 LAQLAEKSLSE--KQAIEAYEKALGISPDL--LEAHYALGYLMQAQD--QPQQAVNHFQE 262

Query: 252 SLKLCDNSIMASICAAKSLISQNKK 276
            ++L  N   A +     L + +K 
Sbjct: 263 VVRLNPNHAEAQLNLGVLLANLDKL 287



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 6/163 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A   +    +        L  L    +   +   + A ++L+ +         A 
Sbjct: 149 GDREQAISAYQAALKMDPSQLTALFNL--ATLYDMQGDTDQAMKELQTLTSQDPQDAKAW 206

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L   + +      A     KAL ISPD      A+        +  +A+    +  + 
Sbjct: 207 LLLAQLAEKSLSEKQAIEAYEKALGISPDLLEAHYALGYLMQAQDQPQQAVNHFQEVVRL 266

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
               N   A L +   L N DK D   + + A   LKL    +
Sbjct: 267 NP--NHAEAQLNLGVLLANLDKLDEAEAAYLAA--LKLNPGLV 305


>gi|270005381|gb|EFA01829.1| hypothetical protein TcasGA2_TC007431 [Tribolium castaneum]
          Length = 921

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 39/244 (15%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  P+   
Sbjct: 576 NRTKEAQEVYERALLYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHE- 630

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKG 240
             +A++   +L       +   N+ +       R   +L              +   D+ 
Sbjct: 631 --QALLNSAIL-------LQEFNRPELRKIARERLLKLLDKDSNNERVHFNLGMLAMDEK 681

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------ 294
           ++  + H    ++ L  +   +    A  L    +  +A   L +   V  HP+      
Sbjct: 682 NIEEAEHWFRRAVHLKADFRSSLFNLALLLADDQRPLEAAPFLNQ--LVKYHPDHVKGLI 739

Query: 295 -IANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            + +IY  ++   +      R  R+ E++ E+++ L  +  + +E G + +A A    A 
Sbjct: 740 LLGDIYINNIKDLDAAENCYR--RILELDPENIQGLHNLCVVHVERGKLLEAQACLEKAH 797

Query: 353 KIAP 356
           ++AP
Sbjct: 798 QLAP 801


>gi|302912770|ref|XP_003050773.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731711|gb|EEU45060.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 613

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 5/197 (2%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +S+       A     +       +N+  VY    Q    +     A +  +  + +   
Sbjct: 369 ISLELGEPDKAE--AEFAKALEQDNNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKD 426

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             F+   L     ++G + S+     + +   P  P V     +  +    +S A+   +
Sbjct: 427 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQGNFSEAVEKFD 486

Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  K+        + LI ++L     K D   +     ++L +     +A    A+ 
Sbjct: 487 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEALCQKALIIDPECDIAVATMAQL 546

Query: 270 LISQNKKRKAEVILEKI 286
           L+ QN    A    E+ 
Sbjct: 547 LLQQNNVPAALKYFERA 563


>gi|146340904|ref|YP_001205952.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278]
 gi|146193710|emb|CAL77727.1| putative TPR repeat protein [Bradyrhizobium sp. ORS278]
          Length = 1410

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 82/236 (34%), Gaps = 13/236 (5%)

Query: 127  VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             +      +   A + L+++L    T   A+  L         L+ A+ Y  +A+ ++  
Sbjct: 789  AKKLQMRGELGDAEQILKLILAGQPTNFDALVGLGMIRTTANRLDEAKDYFQRAVAVNDK 848

Query: 187  APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            +     ++      A  +  A+         +         +L   ++   ++G +  S 
Sbjct: 849  SAEAHGSIGAVEASAGRYEAAVQHYETALSLSPSHPG----ILYGFAMVRQNQGLIEEST 904

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301
                 ++      + A       L +  K  +A     K+   +P     H  IAN+   
Sbjct: 905  ALLRRAIDNKPQHLDAHFALGNLLYTAGKDIEAAKHYLKVLDFSPEHAETHNNIANVLLR 964

Query: 302  -LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                E  +   KRA        +  ++   +    LE+  ++Q+  + +LA+KI P
Sbjct: 965  QGHRERAIEHYKRA---IASRPDYADAYGNLGNAFLELNQLEQSIEQNLLAIKIKP 1017



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 78/286 (27%), Gaps = 19/286 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
               LA+                   LL      +      A   LE+ L        A 
Sbjct: 96  GLGDLAKASTHLQRAVELDDQSGEARLLLGSALTSLGDSVGAVRHLELALAAHPNDADAH 155

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L F   R+G    A  +   AL   P+      ++     +    + AI    +    
Sbjct: 156 QALGFALQRLGQFERALSHHEAALAARPNFAAAAGSLGDACRMLGRHAEAIAHYQRALAI 215

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                    ++L+         G   A+     ++L +  +   A        +  N   
Sbjct: 216 QPNAP----VVLLNIGGCQQAIGQADAAIRTYQQALAVSPHLAEAHYNLGNLHLEMNSWP 271

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            A    E+     P     H  +AN        +       A  L     +   +     
Sbjct: 272 AAIFHYERAIAERPDFPEAHNNLANA-LQSRGRSDEALAHYAEAL-RRRPDYATAHRNRG 329

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370
               ++   ++A A    A+   PR          + ++L ++++A
Sbjct: 330 DTLRDVKRFEEAIASYRTALSHDPRDVTTMNHLAGVLMILGRLDEA 375


>gi|46199597|ref|YP_005264.1| hypothetical protein TTC1295 [Thermus thermophilus HB27]
 gi|46197223|gb|AAS81637.1| hypothetical protein TT_C1295 [Thermus thermophilus HB27]
          Length = 453

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 18/227 (7%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+  +A  +   AL+  P      + + +         RA   + +  +  ++       
Sbjct: 171 GEREAAVPHLYAALNREPGRAEAWDLLARVLAEVGLADRARREVERGLEAVQDPKGK--A 228

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           LL+ R     +  + +       E+L L  +   A+    +  +     ++    L++ +
Sbjct: 229 LLLLRKGTLVEDPEPL-----WREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAY 283

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHA 346
                PE+A        +                KE+      + ++ A  +G   +A  
Sbjct: 284 AKGQDPEVALALAAAYLKAKD-----YANAYRYAKEAGPAGAFLQAQAAQGLGRRQEALK 338

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                   +P+         +E+             Q+A  A  DP 
Sbjct: 339 LLEGIA--SPQALALRGSLLLEEGQGEEAVAA---LQAAYEATRDPQ 380


>gi|22299903|ref|NP_683150.1| hypothetical protein tlr2360 [Thermosynechococcus elongatus BP-1]
 gi|22296088|dbj|BAC09912.1| tlr2360 [Thermosynechococcus elongatus BP-1]
          Length = 350

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 78/272 (28%), Gaps = 43/272 (15%)

Query: 85  YKAL--YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           Y AL    G+M         A +    ++ ++    E L  +L    A        A E 
Sbjct: 99  YYALGYSLGMMGENQG-AAAAYRQAIRLNHRNAQAYEGLAVIL----ARL-GDPQGAIEA 152

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
               L++      A   L     + G++  A     +A  ++P +  +   +    + A 
Sbjct: 153 YRSALRLAPGNWAAQKGLGVLLLQQGNIPEALSRLQQAAALAPGSASIQINLGMALLAAG 212

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S     +++     +      A LL   +   A       +       + L    +  
Sbjct: 213 DPSNGWQAIDRAAHLGQ----RDADLLQQVAELAAAANQPERAIQAYRRLITLQPERVAT 268

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
                + L+ QN   +A  I  +                                 +IN 
Sbjct: 269 YFSLGELLMQQNHPLEAAAIYRQA-------------------------------TQINP 297

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  E    + K     G   +A     +A+K+
Sbjct: 298 QDPEGFYRLGKALAAQGRRQEARNAYQVALKL 329


>gi|113478134|ref|YP_724195.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110169182|gb|ABG53722.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 676

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 74/182 (40%), Gaps = 7/182 (3%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            ++++I PD  W  + +    +   +  +AI +  +  +     +R   +L    +    
Sbjct: 167 QRSIEIKPDLCWSYQHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLL----ADALV 222

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           +KG++  +  + +++++L  +   + +C  +  + +++  +A +I  +  K+NP+     
Sbjct: 223 EKGEIDGAIPNYLKAIQLNPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPNAFWLW 282

Query: 298 IYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            Y     +   +    +    +   I     +    +    ++    D+A    + A++I
Sbjct: 283 TYLGNALVKQGDLETAITCYQKAISIQPNISKIYQFLGDAFVQQQKWDEAAFAYLRAIEI 342

Query: 355 AP 356
            P
Sbjct: 343 NP 344


>gi|119570530|gb|EAW50145.1| interferon-induced protein with tetratricopeptide repeats 2 [Homo
           sapiens]
          Length = 448

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226
              A+    KAL+  P  P  T  +         W     AI  L Q  +   +    + 
Sbjct: 130 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 189

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +L +       +  +         E+L+           AAK    +++  KA  +L+K 
Sbjct: 190 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 249

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  P     H +I   Y          + K    +  + +  +     + ++      I
Sbjct: 250 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 292

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371
             A A    A +       +  +LA +       E+A 
Sbjct: 293 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 330


>gi|21226201|ref|NP_632123.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20904433|gb|AAM29795.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 205

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 8/157 (5%)

Query: 137 NIAHEKLE-MMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           + A E     +L  P        Y +     R     +   YA  AL+I P+        
Sbjct: 18  DKAEEVYRRALLLDPDHVESHCGYGILLN-RRGQKTEAGLHYAR-ALEIDPEHVESNFRY 75

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            +      E   A T+     K   E ++    L +  +   A  G +  +      +LK
Sbjct: 76  ARLLEEKGEPIEAETYYIVALKADPESSK----LHLYYARLLAQHGLIHGARVHFRYALK 131

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +    + A    A+ L     + +AEV  +K  ++NP
Sbjct: 132 ISPEDVEAHCEYARLLARFGHRHEAEVQYKKALELNP 168


>gi|115352910|ref|YP_774749.1| hypothetical protein Bamb_2859 [Burkholderia ambifaria AMMD]
 gi|172061758|ref|YP_001809410.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
 gi|115282898|gb|ABI88415.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           AMMD]
 gi|171994275|gb|ACB65194.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MC40-6]
          Length = 607

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A    +    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 169 ARELARATGETRGPAILALQALL---VRGSDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             +     D   +     ++L++  + + A++     L       +A  I      V  +
Sbjct: 224 --QQLAVDDKEGAARSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D A A 
Sbjct: 278 PKSRDGRLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIRIQQKKLDDASAY 337

Query: 348 AMLAMKIAPRKE------IFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++        ++ LAQI      N  +   W   
Sbjct: 338 LKQYVQLGDKQSNLDVGQGYIYLAQI-SIEQGNDAQASQWLDK 379



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 92/276 (33%), Gaps = 26/276 (9%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++ A     A  + +    +    +      ++  + +   +   A      ML     
Sbjct: 120 IALGAQ--SPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQP----MLARELA 173

Query: 153 REFA-VYS---LYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           R          L  ++   R  D           L    + P    A+ +Q +   +   
Sbjct: 174 RATGETRGPAILALQALLVRGSDRVGGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKEG 233

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  +   ++       L+   +  A++   IAS+   ++      +     +  
Sbjct: 234 AARSLKQALQIRPDY---LPAALMLSQMGPAERAAGIASFEKYVQQNPKSRD---GRLAL 287

Query: 267 AKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEI 320
           ++  ++ ++   A+   E + K    +P P +A     +     ++    LK+ ++L + 
Sbjct: 288 SQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIRIQQKKLDDASAYLKQYVQLGDK 347

Query: 321 NKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                  +  + +++I++E G+  QA        + 
Sbjct: 348 QSNLDVGQGYIYLAQISIEQGNDAQASQWLDKVDQT 383


>gi|67900920|ref|XP_680716.1| hypothetical protein AN7447.2 [Aspergillus nidulans FGSC A4]
 gi|40742837|gb|EAA62027.1| hypothetical protein AN7447.2 [Aspergillus nidulans FGSC A4]
 gi|259483750|tpe|CBF79397.1| TPA: mRNA splicing factor (Prp1/Zer1), putative (AFU_orthologue;
           AFUA_2G06070) [Aspergillus nidulans FGSC A4]
          Length = 941

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 42/295 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  ER +       +++ +     P + E  +  L  E  + G+++ A+R   +A + +
Sbjct: 581 AADLERNHGTKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQSGEIDDARRVLGRAFNQN 639

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240
           P+   +  A V+    A++  +A   L   ++ A         +   R L N D      
Sbjct: 640 PNNEDIWLAAVKLEADAQQTDQARELLATARREAGTDRVWIKSVAFERQLGNVDDALDLV 699

Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                                     +  +        + C  S+   + A++       
Sbjct: 700 NQGLQLYPKADKLWMMKGQIYESQNKLPQAREAYGTGTRACPKSVALWLLASRLEEKAGA 759

Query: 276 KRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSK 333
             +A  +L++     P+ PE+      +  E     + +A  L     +E   S ++ S+
Sbjct: 760 VVRARSVLDRARLAVPNSPELWTESVRV--ERRANNIPQAKVLMARALQEVPSSGLLWSE 817

Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
               LE  S  +A +      K+     +F+ +A+I        +K + W + A+
Sbjct: 818 SIWHLEPRSQRKARS-LEAIKKVDNDPILFITVARIFWGERR-LEKAMTWFEKAI 870



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 9/151 (5%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  +  +G    +      +L++  N     + AA    +   K     +LEK  +  P 
Sbjct: 548 AKASISRGKYETARAIYAYALRVFVNRRSIWVAAADLERNHGTKEALWQVLEKAVEACPQ 607

Query: 293 PE-----IA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            E     +A   +     ++    L RA      N  + +  +   K+  +    DQA  
Sbjct: 608 SEELWLQLAKEKWQSGEIDDARRVLGRA---FNQNPNNEDIWLAAVKLEADAQQTDQARE 664

Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
               A + A    +++     E+   +  D 
Sbjct: 665 LLATARREAGTDRVWIKSVAFERQLGNVDDA 695


>gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 261

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 14/195 (7%)

Query: 131 LAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            ++  Y  A E   E +   P      +       + R      A +   + + I P+  
Sbjct: 35  FSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRR--YEEAIQAFDEVIRIDPELA 92

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                         E+  AI  L+Q      E       +   +      +G+   +   
Sbjct: 93  SAWSYKGGALHELGEYDEAIVALDQAIGLEPE----NGSIWSLKGSALYFQGEYDEALTA 148

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN-----IYTHL 302
             E+++L  +S +A    A  L  Q   ++A   ++++ ++ P +P   +     ++   
Sbjct: 149 IEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRLE 208

Query: 303 LSENTVGKLKRALRL 317
             + ++  L RA++L
Sbjct: 209 RYDESLEALDRAIQL 223


>gi|330840509|ref|XP_003292257.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum]
 gi|325077520|gb|EGC31227.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum]
          Length = 981

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 69/228 (30%), Gaps = 18/228 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + N A E  + +L++      A+  L         ++ A     +A  ++P  P V   
Sbjct: 220 GRNNKAKEAFKRVLELDRDNVEAMIGLSLVLMNDNQIDEAMNLILEAYQLAPTNPIVLNH 279

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   Y    E+ + +  L     N  + +  +A                  +     +++
Sbjct: 280 LANHYFYRGEFQK-VHTLGIAALNNTDVSHIKAESSYLVGKALHATQRWSEALQFYHQAV 338

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHL----LS 304
               +  +A     +  I      KA    E +    P+       + ++Y H      S
Sbjct: 339 LKNPDFYLAQFGLGQIYIHNEDFDKAISCFENVLAKQPNNYETLQILGSLYKHGSLYKNS 398

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK--------IALEMGSIDQA 344
            NT        +  EIN     +   +++         ALE      A
Sbjct: 399 MNTATAANVLKKAIEINPNDYNNWFELAQILEISEVGAALEAYEKGLA 446


>gi|302766433|ref|XP_002966637.1| hypothetical protein SELMODRAFT_168306 [Selaginella moellendorffii]
 gi|300166057|gb|EFJ32664.1| hypothetical protein SELMODRAFT_168306 [Selaginella moellendorffii]
          Length = 564

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 9/141 (6%)

Query: 160 LYFES-CRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVLAKEWSRAITFLN 212
           L  ++    G    A     +A  + P    V         V +      ++ +A  F  
Sbjct: 288 LLAQADMAQGRFEEAVAITERAARLDPQNFEVSSLLRKARTVSKARAAGNDFFKAAKFFE 347

Query: 213 Q--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                    E +   AILL  R+   +  G    +  D   +L++    + A +  A S 
Sbjct: 348 ACAAYTEGLELDPANAILLCNRAASRSKLGQWEKTLEDCNAALQVQPKYMKALLRRAHSY 407

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
               +   A    E I + +P
Sbjct: 408 AKLERWEDAARDYEAIRREHP 428


>gi|281412533|ref|YP_003346612.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
           RKU-10]
 gi|281373636|gb|ADA67198.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
           RKU-10]
          Length = 357

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 85/221 (38%), Gaps = 13/221 (5%)

Query: 136 YNIAHEKLEMMLQIPATREFA--VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           Y+ AH+ ++ ML I      A  +   L  E    G +    +Y  KA++I P       
Sbjct: 113 YDTAHDIIKFMLDIDENYAPAYELKGSLLVE---QGKIEEGIKYLDKAVEIDPWLVQAYA 169

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++ + +    ++ +AI +  ++     E+N N  I     +    +      +       
Sbjct: 170 SLGEAHYNLGDYEKAIHYWEREL----EYNPNDKITYFMITEAYHEINRKDLAAKTLERL 225

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVG 309
           LK+  ++I A    ++       + KA+ + EKI    P +P     +    L       
Sbjct: 226 LKIDPDNIPALYQLSQLYRDLGNEEKAKEMEEKIMNCKPKYPTELEPWARVMLKHGRYKE 285

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            ++   ++ E +  +  + +++    +++G ID+A      
Sbjct: 286 VVEELEKIVESSPLNTLARLLLVVPYVKLGQIDKAREILED 326



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 7/134 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L   +LE AD+     ++      L + +N   A       L+ Q K  +    L+K  +
Sbjct: 100 LYDLALEYADRNFYDTAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKYLDKAVE 159

Query: 289 VNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           ++  P +   Y  L        +    +    R  E N     +  ++++   E+   D 
Sbjct: 160 ID--PWLVQAYASLGEAHYNLGDYEKAIHYWERELEYNPNDKITYFMITEAYHEINRKDL 217

Query: 344 AHAKAMLAMKIAPR 357
           A       +KI P 
Sbjct: 218 AAKTLERLLKIDPD 231


>gi|28564904|gb|AAO32536.1| TOM70 [Naumovia castellii]
          Length = 590

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 72/241 (29%), Gaps = 12/241 (4%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            +Y            +Y    Q+    +QY  A E  +   ++     F    L   S R
Sbjct: 355 ANYEKAMKLDDKNAALYYHRGQMYFITQQYEKAGEDFDKAKELDPENIFPYIQLACLSYR 414

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRN 224
               +  +   ++A    P++  V     +      ++  A+    +    +  ++    
Sbjct: 415 ENKFDDCETLFSEARRKFPNSSEVPNFYAEILADKGDFDAALKEYERAIELEKKQDAVHV 474

Query: 225 RAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               L+ ++          + + +     E++K    S  A I   +  + Q    +A  
Sbjct: 475 GIAPLVGKATLLVRTPTVENFVEATSLLEEAVKEDPRSEQAKISLGQLKLQQEDIDEAIE 534

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           + E          +A  +   L   T  +  +  +    + +   + +  +  AL     
Sbjct: 535 LFESAAT------LARTFEEKLQATTFAEAAKIQKRIRADPKMS-AKIQETIAALRASDF 587

Query: 342 D 342
            
Sbjct: 588 A 588


>gi|312375518|gb|EFR22878.1| hypothetical protein AND_14066 [Anopheles darlingi]
          Length = 1188

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 70/249 (28%), Gaps = 53/249 (21%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q AL    + +A +    +  +P     A      E  + G+ +     A         
Sbjct: 603 AQAALDALNFQVARDAYVRVRNLPWLELIAE---LRERQKRGETSKEVLLAE-------- 651

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                      Y  A  +  A     +   N+K       + +   + E   +G      
Sbjct: 652 ----------AYAFAGRFKEAGRLYQKSGSNSKALAMYSDLRMFDLAQEFLKEGSAADKK 701

Query: 247 HDA-IESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHL-L 303
                 +   C      +  AA+ L+S  +  +A  I+ E+ W        A++   +  
Sbjct: 702 ELIRRRAEWACSVHEPRA--AAELLLSAGESERAIEIVAEQGW--------ADVLLDIGR 751

Query: 304 SENTVGK---------LKRALRLEEINKESVESLVIVSK------IALEMGSIDQAHAKA 348
                 +         L+R   L      + E    + +      + +E     +A   A
Sbjct: 752 RLAATERAPLELIAGHLRRLKAL----PLAAEIFRKLGEEEQVVQLHVEARDWPEAFRLA 807

Query: 349 MLAMKIAPR 357
               K+ P 
Sbjct: 808 EHLPKVLPS 816


>gi|300935380|ref|ZP_07150379.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
 gi|300459410|gb|EFK22903.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
          Length = 389

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 62/281 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361
               +   L +  I +A   +  A       ++  P   +F
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318


>gi|197123572|ref|YP_002135523.1| hypothetical protein AnaeK_3173 [Anaeromyxobacter sp. K]
 gi|196173421|gb|ACG74394.1| TPR repeat-containing protein [Anaeromyxobacter sp. K]
          Length = 697

 Score = 45.7 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 39/136 (28%), Gaps = 1/136 (0%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 N+        +   A      A E+   +L        AV +L     + G + 
Sbjct: 518 AVALAPNDAASRFALGRALHAAGDLAGAVEEYRAVLARQDRHRLAVNNLAVAYAQAGRME 577

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LI 230
            A  +  +A  + PD P     + +  +   +   A        + A       A+L   
Sbjct: 578 LAIEHFRRAAALDPDDPEPAVNLGRALLTTGDAGGARDASEAALRTAPRHPGAHAVLGGA 637

Query: 231 ARSLENADKGDMIASY 246
             +++ A       + 
Sbjct: 638 YLAMDRAAPAAEHLAL 653



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 64/217 (29%), Gaps = 23/217 (10%)

Query: 158 YSLYFESCRIGDLNSAQRYAT------------KALDISPDAPWVTEAVVQQYVLAKEWS 205
             L   +  +  + +   +A              A   +P  P     +        E +
Sbjct: 416 RGLMAVALGVAAVLAVITFARNEVWADDVRLWSDAAVKAPANPRTHGNLGLALAQRGEVA 475

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           R +  ++   +   ++ +        + +    +G ++ +      ++ L  N   +   
Sbjct: 476 RGMAEIDVALRLKPDFYQ----AHTNKGVLLLQQGQLVPALEHLRYAVALAPNDAASRFA 531

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEI 320
             ++L +      A      +      H      +A  Y           ++   R   +
Sbjct: 532 LGRALHAAGDLAGAVEEYRAVLARQDRHRLAVNNLAVAYAQAGRMELA--IEHFRRAAAL 589

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + +  E  V + +  L  G    A   +  A++ APR
Sbjct: 590 DPDDPEPAVNLGRALLTTGDAGGARDASEAALRTAPR 626


>gi|302792679|ref|XP_002978105.1| hypothetical protein SELMODRAFT_176812 [Selaginella moellendorffii]
 gi|300154126|gb|EFJ20762.1| hypothetical protein SELMODRAFT_176812 [Selaginella moellendorffii]
          Length = 564

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 9/141 (6%)

Query: 160 LYFES-CRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVLAKEWSRAITFLN 212
           L  ++    G    A     +A  + P    V         V +      ++ +A  F  
Sbjct: 288 LLAQADMAQGRFEEAVAITERAARLDPQNFEVSSLLRKARTVSKARAAGNDFFKAAKFFE 347

Query: 213 Q--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                    E +   AILL  R+   +  G    +  D   +L++    + A +  A S 
Sbjct: 348 ACAAYTEGLELDPANAILLCNRAASRSKLGQWEKTLEDCNAALQVQPKYMKALLRRAHSY 407

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
               +   A    E I + +P
Sbjct: 408 AKLERWEDAARDYEAIRREHP 428


>gi|218189598|gb|EEC72025.1| hypothetical protein OsI_04909 [Oryza sativa Indica Group]
          Length = 890

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 69/208 (33%), Gaps = 23/208 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +  +S R GD  +A  +       +P        +   Y   +E+   I     K + A 
Sbjct: 58  IARQSYRAGDYKAALEHCNAVYRANPRLLENLLLLGAVYYQLREFDMCI----AKNEEAV 113

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
               N      + +    +KGD+  +    + +++L      A    A +   +    +A
Sbjct: 114 AIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQA 173

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV---------- 329
                +   +NPH  +A+ Y +L        LK A  L           +          
Sbjct: 174 AECCHQALALNPH--LADAYCNL-----GDVLK-AQGLYREAYSHYLDALNIKPTFANAW 225

Query: 330 -IVSKIALEMGSIDQAHAKAMLAMKIAP 356
             ++ + ++ G  ++A      A+K  P
Sbjct: 226 NNIAGLLMQWGDFNKAAVYYKEAIKCNP 253



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 14/188 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD+++A ++   A+ + P        +   Y      S+A    +Q        +  
Sbjct: 131 REKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNP--HLA 188

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A   +   L+   +G    +Y   +++L +      A    A  L+      KA V  +
Sbjct: 189 DAYCNLGDVLK--AQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAAVYYK 246

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIAL 336
           +  K NP     H  + N+Y   ++      +           E+  + V    +     
Sbjct: 247 EAIKCNPAFYDAHLNLGNLYK--VTGMRQDAIVCFQNAARAKPENAVAYVFSGNLGNAYH 304

Query: 337 EMGSIDQA 344
           E G +D A
Sbjct: 305 EQGQLDLA 312


>gi|37521958|ref|NP_925335.1| hypothetical protein glr2389 [Gloeobacter violaceus PCC 7421]
 gi|35212957|dbj|BAC90330.1| glr2389 [Gloeobacter violaceus PCC 7421]
          Length = 783

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 43/105 (40%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A   + Y  A +  +  L+   T   +   +      +GD  +A+    KAL + P  P 
Sbjct: 667 AELRKDYKQALQFYQRHLKRNPTDAESHADIGRCYRLLGDPANAKASLAKALQVIPALPE 726

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               + +  +   + S A+  +    K  +  +++  +L+ A++L
Sbjct: 727 AHYELAEIALAEGDRSTALKEIQYTLKVLEGADQSDKLLIKAKAL 771



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 76/273 (27%), Gaps = 57/273 (20%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                  + Q+  A    +  L +      A   L   +   G+   A  +   AL  S 
Sbjct: 475 MADTYRLQGQFEQARSLYQQSLALDDNNTGAQLGLASLASSTGEFAGALEFNRLALANSR 534

Query: 186 DAPWVTEA---VVQQYVLAKEWSRAI---------------TFLNQK--KKNAKEWNRNR 225
            +     A   ++  Y L  +W + +               + LNQ     +     +  
Sbjct: 535 TSDQKENAYANLLTHYSLRHQWQKVVPLIPQFLTTNNGLINSLLNQAFILDSYVLVGQQD 594

Query: 226 AILLIARSLENADKGDMI-------------ASYHDAIESLKLCDNSIMASICAAKS--- 269
                 + ++       +              +  DA  +  L    I A++        
Sbjct: 595 MAFAALKRMQAQVGSSPLLATFVQMGYLRVYLALEDAARAEPLIPQ-IEATLHRYSLDQL 653

Query: 270 --LISQNKKRKAEVILEKIWK----------------VNPHPEIANIYTHLLSENTVGKL 311
              I   ++R     L K +K                   H +I   Y  LL +    K 
Sbjct: 654 IDAIELERRRGGVAELRKDYKQALQFYQRHLKRNPTDAESHADIGRCY-RLLGDPANAKA 712

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             A  L+ I     E+   +++IAL  G    A
Sbjct: 713 SLAKALQVI-PALPEAHYELAEIALAEGDRSTA 744


>gi|145608888|ref|XP_369777.2| hypothetical protein MGG_06292 [Magnaporthe oryzae 70-15]
 gi|145016312|gb|EDK00802.1| hypothetical protein MGG_06292 [Magnaporthe oryzae 70-15]
          Length = 840

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 93/281 (33%), Gaps = 23/281 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L TG ++++ +    A +  S + + H      L ++   Q      +Y  A    + + 
Sbjct: 516 LGTGYLALSQYQCSEAVQAFSTIPRAHVDTPWVLAHIGRAQYEQT--KYAEAEASFKRLR 573

Query: 148 QIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            +   R          ++ L  E         A   A + +DI+  +P    A+   + L
Sbjct: 574 TLAPNRLEDMEVYSTVLWHLKKE-------TEASFLAHELVDIAWHSPHAWCALGNAWSL 626

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A +  +A+    +  +   ++    A     +  E+    +   +      ++       
Sbjct: 627 ASDREQALRCFKRATQLDAKF----AYAYTLQGHEHFVSEEYDKALTSYRHAIAADRRHY 682

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT---VGKLKRALRL 317
            A     +         KA         ++P   +         E     V  L+   + 
Sbjct: 683 NAYYGIGRVYEKLGNYDKAYTHFHAASVIHPTNAVLICCIGTALEKQKQVVQALQFFTKA 742

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            E+   + ++  + ++  L +G + +A  + M+   +AP +
Sbjct: 743 TELAPRAAQTRFMKARALLALGQLHEAQKELMILKDLAPDE 783


>gi|145489287|ref|XP_001430646.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397745|emb|CAK63248.1| unnamed protein product [Paramecium tetraurelia]
          Length = 663

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 16/249 (6%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAV----YSLYFESCRIGDLNSAQRYATKALD 182
            +  + + +Y  A    + + QI  TR   +      L+    +          A   L 
Sbjct: 375 ARSFMDQVKYTDAERVWKELRQIEPTRLEGMDYYSSCLWHLKKQSELTY----LAHSCLQ 430

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           IS  AP    A+   + L KE   +I F  +  +  K++    +        E +   + 
Sbjct: 431 ISTQAPETWIAIGNCFSLTKEIDNSIKFFGRAIQLRKDY----SYAYTLSGHEFSQNENF 486

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN--IY 299
             +      +  L      A           +K   A     +  ++NP +P +      
Sbjct: 487 QQAKKSYEAATSLDQRQYNAWWGQGNMYYKTDKYEDAIKCFIQAIRINPNNPVLPTFLAM 546

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RK 358
           ++         LK   + E ++  +  +    +   ++M   +QA ++     +  P   
Sbjct: 547 SYAAKGEHNDALKYFEQSERLDPMNGLNKYQKANSLIKMDKYEQALSELQTLSQFIPKEA 606

Query: 359 EIFLLLAQI 367
            I++L+ +I
Sbjct: 607 AIYILMGRI 615


>gi|158522428|ref|YP_001530298.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 762

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 45/365 (12%), Positives = 102/365 (27%), Gaps = 90/365 (24%)

Query: 27  DVSITWGNRLYRTSPFVILSILYF-------------FLFAWILLFAVSRF----FLSCP 69
            +++ + +R Y  S  VI ++ +              FL A  LL+    +      +  
Sbjct: 353 GLALVFEHRTYLPSVLVIAALAWAAITYIRPRPLAIGFLCAVTLLWGFWTYQRNAIWADE 412

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             L+  + ++                   +  LAR                   L     
Sbjct: 413 VALWRDVTEK-------------------SPTLAR---------------PWSNL--GMA 436

Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKA 180
                    A +   + +   P          + E+          +G    A ++  +A
Sbjct: 437 LQIAGNSEAALQAFQKAIALDPN---------HMEAHNNSGFILRELGRPKEAIKFFRRA 487

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L+I+P        +   +   K+ ++A T   Q  +    +++    L     +    +G
Sbjct: 488 LEINPAYADAHYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSKAHNNL----GVILMQEG 543

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           D  A+      +LK       A          Q    +A    +K    +P       Y 
Sbjct: 544 DHEAAVAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADP------AYA 597

Query: 301 HLLSENTVGK---------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +     +         +    ++       V+    ++++    G    A ++   A
Sbjct: 598 GAANNLARVRQTIEKHGPAITELKQMLHKTPNDVDLSCRLAQVYQAAGMRYGAISQYQKA 657

Query: 352 MKIAP 356
           + + P
Sbjct: 658 LALQP 662



 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  +L+ A  G+  A+     +++ L  N + A   +   L    + ++A     +  ++
Sbjct: 433 LGMALQIA--GNSEAALQAFQKAIALDPNHMEAHNNSGFILRELGRPKEAIKFFRRALEI 490

Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           NP     H  +   +  L  +    +     +   +N    ++   +  I ++ G  + A
Sbjct: 491 NPAYADAHYNLGLAFFDLK-DMAQARTA-FEQTLRVNPLYSKAHNNLGVILMQEGDHEAA 548

Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            A    A+K  PR  + +  L  I     +       + + AL A  DP 
Sbjct: 549 VAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAA-SFFKKALTA--DPA 595



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 4/148 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           E  +  A    +  L+       A  +L   + + G+ + A  +  KAL   P       
Sbjct: 542 EGDHEAAVAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADPAYAGAAN 601

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + +     ++   AIT L Q          N   L    +      G    +     ++
Sbjct: 602 NLARVRQTIEKHGPAITELKQMLHKTP----NDVDLSCRLAQVYQAAGMRYGAISQYQKA 657

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAE 280
           L L      +         +  +  KA 
Sbjct: 658 LALQPGHGPSLNALGVLYAAMGQPAKAV 685


>gi|45185361|ref|NP_983078.1| ABR131Wp [Ashbya gossypii ATCC 10895]
 gi|44981050|gb|AAS50902.1| ABR131Wp [Ashbya gossypii ATCC 10895]
          Length = 594

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 20/231 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A N   A ++    S  +   +   +  +  Q   A + ++ A E          +R + 
Sbjct: 359 AQNFEKALELDPKSSAAYY--HRAQMNFVIQQFDQAGKDFDKAKEC-------DPSRVYP 409

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--LNQK 214
              L   + R    +  +   ++A    P AP V     +      ++  A+      +K
Sbjct: 410 YIQLACLAYREKKFDDCETLFSEARRRFPTAPEVPNFYAEILSDKGDFENALKEYDFARK 469

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLI 271
            ++A+E        L+ ++   A +        +      + +    S  A I  A+  +
Sbjct: 470 LEDAQEGIHVGVAPLVGKAALLARQPSASNFAEATKLFELACEKDPRSEQAKIGLAQLKL 529

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            Q +  +A  + E         +++  +   L   T  +  +  +    + 
Sbjct: 530 QQEEVDEAIKLFEAA------ADLSRAFEEKLQATTFAEAAKIQKRIRADP 574


>gi|261194986|ref|XP_002623897.1| pre-mRNA splicing factor prp1 [Ajellomyces dermatitidis SLH14081]
 gi|239587769|gb|EEQ70412.1| pre-mRNA splicing factor prp1 [Ajellomyces dermatitidis SLH14081]
 gi|239610736|gb|EEQ87723.1| pre-mRNA splicing factor prp1 [Ajellomyces dermatitidis ER-3]
 gi|327348822|gb|EGE77679.1| pre-mRNA-splicing factor [Ajellomyces dermatitidis ATCC 18188]
          Length = 941

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 120/335 (35%), Gaps = 47/335 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149
           SIA      AR +++Y  +           +     A  ER +       +++ +     
Sbjct: 552 SIARGKYETARAIYAYALRVFVNKK----NIWLA-AADLERNHGTKESLWQLLDKAVEAC 606

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P +    +  L  E  + G++++A+R   +A + +PD   +  A V+    A +   A  
Sbjct: 607 PQSESLWMQ-LAKEKWQAGEIDNARRVLGRAFNQNPDNEDIWLAAVKLEADANQTEHARE 665

Query: 210 FLNQKKKNAKE--------------WNRNRAILLIARSLEN---------------ADKG 240
            L+  ++ A                 NR +A+ L+ + L+                 ++ 
Sbjct: 666 LLSTARREAGTDRVWIKSVAFERQLGNREQALDLVNQGLQLYPKADKLWMMKGQIYEEQN 725

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +        + C  S+   + A++         KA  IL++       P+ A ++T
Sbjct: 726 KYPQAREAYGTGTRACPKSVPLWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWT 783

Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356
             +  E     + +A  L     +E   S ++ S+    LE  +  +  +      K+  
Sbjct: 784 ETVRVERRANNINQAKVLMAKALQEVPNSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDN 842

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              +F+ +A+I        DK + W + A+ +  D
Sbjct: 843 DPILFVTVARIFWGERR-LDKAMTWFEKAIVSNSD 876


>gi|255538832|ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
 gi|223551182|gb|EEF52668.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
          Length = 804

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 68/223 (30%), Gaps = 36/223 (16%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           SA  Y  +A  + P      + +        E+  A+  L +      ++    A   +A
Sbjct: 331 SACEYYREAAILCPTHYRALKLLGSALFGVGEYMAAVKALEEAIFMKPDY--ADAHCDLA 388

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIW 287
            +L     G    +     +++ L    + A        +   + ++A      +L  +W
Sbjct: 389 SALHAM--GQDEKAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYSRVL-AVW 445

Query: 288 KVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKESV------------------- 325
             +   ++    + L    +E T   LK AL++    +                      
Sbjct: 446 PNHWRAQLNKAVSLLGAGETEETKKALKEALKMTNRVELHDAISHLKQLQKKKVKGSNGV 505

Query: 326 ---ESLVIVSKIA--LEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              E   IV +++          A      A+++   + I  L
Sbjct: 506 ANGEGAFIVVELSKFKTASEKTTARQDLANALQVRAFQRITRL 548



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 11/164 (6%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257
             +  A        + A+      A LL        +    +G ++++     E+  LC 
Sbjct: 285 GRFKEAKEEFLLALEAAEAGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCP 344

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
               A      +L    +   A   LE+   + P     H ++A+   H + ++    ++
Sbjct: 345 THYRALKLLGSALFGVGEYMAAVKALEEAIFMKPDYADAHCDLASA-LHAMGQDEKA-IE 402

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +  ++    V++L  +  + +++G   +A       + + P
Sbjct: 403 VFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYSRVLAVWP 446


>gi|157812758|gb|ABV81124.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Limulus polyphemus]
          Length = 290

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 73/184 (39%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N             A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALHLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G ++ A+     AL + P        +            A     +  +   
Sbjct: 26  LANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E+    A      +     +G +  +     E++++      A      +L      + A
Sbjct: 86  EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A+I  H  S N    +       ++  E  ++   ++
Sbjct: 142 LQCYTRAIQINPGFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 66/215 (30%), Gaps = 22/215 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q + A E     L +  T   ++ +L       G +  A R   KAL++ P+
Sbjct: 27  ANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  + +  +    A           + GD+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301
                ++++      A    A          +A        K+ P  P+    +A+    
Sbjct: 143 QCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTALKLKPEFPDAYCNLAH-CLQ 201

Query: 302 LLSE--NTVGKLKRA----------LRLEEINKES 324
           ++ +  +   ++K+            RL  ++   
Sbjct: 202 IVCDWTDYEARMKKLVSIVADQLEKNRLPSVHPHH 236


>gi|74316977|ref|YP_314717.1| tetratricopeptide repeat-containing protein [Thiobacillus
           denitrificans ATCC 25259]
 gi|74056472|gb|AAZ96912.1| putative N-acetylglucosaminyl transferase [Thiobacillus
           denitrificans ATCC 25259]
          Length = 394

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 39/313 (12%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFES------------CRIGDLNSAQRYATKAL 181
            +++ A    E +L+    +      L  E              + G L+ A++   K L
Sbjct: 84  GEFDRAIRMHEHLLEREYPQ--GHKGLAEEQRLRAMSELGQDYLKAGLLDRAEQVFGKLL 141

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKG 240
           + S         +++ YV  K+W +AI      +++ +K  N + A      +L  + KG
Sbjct: 142 ETS-QHGQARTHLLEIYVQEKDWQKAIDAARLLERDTSKPLNADIAHFYCELALLESAKG 200

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEI 295
           +  A+     ++L     S+ A++       +  +   A       W+        H  +
Sbjct: 201 NSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAA----IAAWRLVETQSAGHMAL 256

Query: 296 -----ANIYTHLLSENTVGKLKRALRLEEINKESV-ESLVIVSKIALEMGSIDQAHAKAM 349
                   Y  L        ++               + + ++    E  +   A   A 
Sbjct: 257 VVDRVLGSYRQL--GRVGEGVQWLRAFYARQPSHDVFNALYLAVSETEGAA--AARQLAR 312

Query: 350 LAMKIAPRKEIF--LLLAQIEQANSHNTDKIL-YWTQSALHAMPDPLWISD-DGYLSSVW 405
             ++  P       LL A+I  A+    + +    +  A ++     +     G+ +  +
Sbjct: 313 EELRRNPSLRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRYQCGSCGFKAKQF 372

Query: 406 LPLSPISKTLCYF 418
               P       F
Sbjct: 373 FWRCPACGRWDSF 385


>gi|113476445|ref|YP_722506.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110167493|gb|ABG52033.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 832

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 21/241 (8%)

Query: 126 EVQIALAERQYNIAHEK-LEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDI 183
           E +  L++  ++ A+   L+ +  +P     +       E      L++A  +  KA++ 
Sbjct: 14  EAEYYLSQGDFDKAYATSLQALELVPDFAPVSNTIGKIMEKI--DALDAAITWYKKAIEK 71

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+       +   YV  +EW +A+    +  K    +    A    A +          
Sbjct: 72  QPNLAENHANLGSVYVKQQEWDQAVASYQKATKLEPNF----ASAYRALAEIYHQIDKPE 127

Query: 244 ASYHDAIESLKLCDNSIMASIC----AAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
            +     ++  L      A+        K+L++ N+K++A    E+  K NP     H  
Sbjct: 128 LAASCQYKAFILKPEL--ATDLEYLNLGKTLLTYNRKKEAIACYEQSLKFNPNLYQAHHN 185

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +   Y+    E     +    +  ++N +   S   + K        ++A +    A+++
Sbjct: 186 LGEFYS--QEEKWQAAISSYQKAIKLNPKFSWSHHSLGKAFANTQQWEKAISSYQEALQL 243

Query: 355 A 355
            
Sbjct: 244 N 244



 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 4/191 (2%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            LA                 L YL   +  L   +   A    E  L+       A ++L
Sbjct: 127 ELAASCQYKAFILKPELATDLEYLNLGKTLLTYNRKKEAIACYEQSLKFNPNLYQAHHNL 186

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                +     +A     KA+ ++P   W   ++ + +   ++W +AI+   +  +    
Sbjct: 187 GEFYSQEEKWQAAISSYQKAIKLNPKFSWSHHSLGKAFANTQQWEKAISSYQEALQ---- 242

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            N   A+              + A+     +S++L   + +     A     + +   A 
Sbjct: 243 LNSQDAVTYHCLGDALVKHKQLDAAISAYQKSIELKPETWVVHHKLANIFQEKGELDAAI 302

Query: 281 VILEKIWKVNP 291
           V   K  K+NP
Sbjct: 303 VAYHKAIKLNP 313



 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+ L   +     +GD   +Y  ++++L+L  +    S    K +   +    A    +K
Sbjct: 8   ALKLNQEAEYYLSQGDFDKAYATSLQALELVPDFAPVSNTIGKIMEKIDALDAAITWYKK 67

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             +  P     H  + ++Y      +    +    +  ++      +   +++I  ++  
Sbjct: 68  AIEKQPNLAENHANLGSVYVKQQEWDQA--VASYQKATKLEPNFASAYRALAEIYHQIDK 125

Query: 341 IDQAHAKAMLAMKIAP 356
            + A +    A  + P
Sbjct: 126 PELAASCQYKAFILKP 141


>gi|242278757|ref|YP_002990886.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio salexigens DSM 2638]
 gi|242121651|gb|ACS79347.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio salexigens DSM 2638]
          Length = 811

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 7/129 (5%)

Query: 131 LAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                 + A E  E  L+  P      V  L   S +   L+ A++Y  KA  +      
Sbjct: 659 QMLGSMDKAREAYEKCLELEPENVFSLVR-LGVLSEQDKGLDEAEQYYLKAAKLKGGDAL 717

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHD 248
               + +      +  +A  +L+Q        N N A  +   +    + G D   +   
Sbjct: 718 SMRHLARISYSRGDMDKAREYLHQAL----NANHNDAAAMNMLARIYLESGEDPQVAEVL 773

Query: 249 AIESLKLCD 257
           A +S  L  
Sbjct: 774 ARQSAALKP 782



 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 43/112 (38%), Gaps = 1/112 (0%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A +      ++      ++  L   S   GD++ A+ Y  +AL+ + +       + +
Sbjct: 699 DEAEQYYLKAAKLKGGDALSMRHLARISYSRGDMDKAREYLHQALNANHNDAAAMNMLAR 758

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            Y+ + E  +    L ++    K       + L A++LE  +K +       
Sbjct: 759 IYLESGEDPQVAEVLARQSAALKPAKEQFWMTL-AKALEVQEKFEEAEQVRS 809


>gi|110597396|ref|ZP_01385683.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
 gi|110340940|gb|EAT59411.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
          Length = 1055

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 4/127 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G+  +A     KALD+  D                ++  A+   +Q      ++    A
Sbjct: 129 QGEFKAALASFDKALDLKYDLAKAYYYKGNILHHLNQFGDALASFDQAIALKPDY----A 184

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                R L   D+ ++ A+      ++KL  + +   +  A +L+ +   ++   + E  
Sbjct: 185 EAYANRGLVLKDRNELDAALASFGHAIKLQPDLVAPRVNKAITLLLKGNFKEGFELFEYR 244

Query: 287 WKVNPHP 293
           WK   +P
Sbjct: 245 WKNEKYP 251



 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 19/201 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEW 221
           + G+L  A+    + L I P        +    +  K+  +A+    +      +++  +
Sbjct: 26  QQGELAQAETLYNEILTIQPKQADSLHMLGVIALQKKDHRKAVDLFGKAIDIYPRHSAFY 85

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N     L   R L+        A+     +++ L  +   A +     L  Q + + A  
Sbjct: 86  NNRGNALYELRQLD--------AALASFDQAIALKPDFADAYVNQGMVLYDQGEFKAALA 137

Query: 282 ILEKIWKVNPHPEIANIY---THLLSENTV--GKLKRALRLEEINKESVESLVIVSKIAL 336
             +K   +    ++A  Y    ++L         L    +   +  +  E+      +  
Sbjct: 138 SFDKALDLKY--DLAKAYYYKGNILHHLNQFGDALASFDQAIALKPDYAEAYANRGLVLK 195

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
           +   +D A A    A+K+ P 
Sbjct: 196 DRNELDAALASFGHAIKLQPD 216



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 61/193 (31%), Gaps = 31/193 (16%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIA--------RSLE 235
           D+PW   A + +     +W   +  L+     A     + + + +L A        ++L 
Sbjct: 492 DSPWYDSAKLYRQERTGDWEGVLQQLSADLITASTRLASSHPSNILTAAQLDLTFRQALT 551

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              +  +  +     + L +    + A   +  + +   + ++A  ++ +   ++  P+ 
Sbjct: 552 LHQQSKIAQAKVLYEQILAVSPKHVDALHLSGVAALQSREHQRAADLIGRAIVLS--PDN 609

Query: 296 ANIY------------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           A  Y                 E+    + R         E  E+         E+     
Sbjct: 610 ATFYSNRGIALKELGLLDAAVESYNNAIAR-------KPEYPEAYSNRGLALHELKKFTL 662

Query: 344 AHAKAMLAMKIAP 356
           A A    A+ + P
Sbjct: 663 ALASFDKAITLKP 675



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 40/131 (30%), Gaps = 6/131 (4%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     +      A     KA+ + P  P               +  A+   ++    
Sbjct: 650 RGLALHELKK--FTLALASFDKAITLKPAFPEALSNRGNTLQELNRFEEALDSYDRAIAL 707

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            +++    A  L  R L          + +   +++ L  +   A +  A +L+ +   +
Sbjct: 708 KEDY----AEALSNRGLALQQLNRFDEALNSFEQAIALRADFADAWLNRALALLLKGNFQ 763

Query: 278 KAEVILEKIWK 288
               + E  W+
Sbjct: 764 SGWELYEWRWR 774


>gi|262304947|gb|ACY45066.1| acetylglucosaminyl-transferase [Acheta domesticus]
          Length = 288

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 436

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 86/250 (34%), Gaps = 19/250 (7%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ +    +RQY+ A E  E  L+     P        +L     +IG  +SA ++  K 
Sbjct: 163 LKGRYLFEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALM----KIGGYHSAIQFFKKC 218

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---IARSLENA 237
           L I PD       +   Y +  ++  AI    +  +      + R  +    +    E  
Sbjct: 219 LKIRPDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMELDPGSTKYRKYIADVYLVMGKEAL 278

Query: 238 -DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             +G    +     +++++  N I A      +       R A     K+ +++  P+  
Sbjct: 279 YKEGKPQEAIEYFDKTIRMIANHITAWFSKGVAYKKLGAYRNATACFLKVVEMD--PQNG 336

Query: 297 NIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           + Y  +      + N    ++  L     +    +++  V  + +E G    A A     
Sbjct: 337 HAYYEMAQILEKTGNNEEAIRCYLETIRCDPSHTDAMYKVGNLLMEGGDYKNAIAYFDRV 396

Query: 352 MKIAPRKEIF 361
           +   P   + 
Sbjct: 397 LDKIPESSVA 406



 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 92/293 (31%), Gaps = 28/293 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
             P A  M + V +     N+  +  LE        +    H +    L       + + 
Sbjct: 81  ENPEALTMRASVLRLIALQNQDPMRCLEA--VEICNKTLKIHPEYGPALHEKGMALWTL- 137

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                    G  + A     +A  I    P+  +   +     +++  AI    +  +  
Sbjct: 138 ---------GKRDEAMSLFEQAKKIHASYPYPWDLKGRYLFEKRQYHEAIEAYEEALEKK 188

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                    LL +        G   ++     + LK+  +   A +    S    N+  +
Sbjct: 189 P----QDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDE 244

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHL------LSENTVGKLKRALRLEEINKESVES 327
           A    E+  +++P        IA++Y  +              ++   +   +    + +
Sbjct: 245 AIDAYEEAMELDPGSTKYRKYIADVYLVMGKEALYKEGKPQEAIEYFDKTIRMIANHITA 304

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKIL 379
                    ++G+   A A  +  +++ P+    +  +AQI +   +N + I 
Sbjct: 305 WFSKGVAYKKLGAYRNATACFLKVVEMDPQNGHAYYEMAQILEKTGNNEEAIR 357



 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 16/206 (7%)

Query: 170 LNSAQRYATKALDISPDAP--WVT--EAVVQQYVLAKEWSRAITFLNQKK---KNAKEWN 222
             +A +   + +++    P  WV   +A +        + RA     +         E  
Sbjct: 31  YEAAVQTFNRGIELDRSHPGCWVGMGKAFLGL----GRYDRADDCFIRALDIDPENPEAL 86

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             RA +L   +L+N D    + +     ++LK+      A      +L +  K+ +A  +
Sbjct: 87  TMRASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGPALHEKGMALWTLGKRDEAMSL 146

Query: 283 LEKIWKVN---PHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            E+  K++   P+P ++   Y           ++      E   +  + L  + +  +++
Sbjct: 147 FEQAKKIHASYPYPWDLKGRYL-FEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALMKI 205

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLL 364
           G    A       +KI P      LL
Sbjct: 206 GGYHSAIQFFKKCLKIRPDYTAAWLL 231


>gi|15607128|ref|NP_214510.1| hypothetical protein aq_2197 [Aquifex aeolicus VF5]
 gi|2984391|gb|AAC07909.1| hypothetical protein aq_2197 [Aquifex aeolicus VF5]
          Length = 162

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 6/135 (4%)

Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L+ E+ +   +GDL+ A     K++D+ P A      +   Y +   +  AI    +  +
Sbjct: 14  LFEEAYKYHMLGDLDKAIELYRKSIDVYPTA-EAWTFLGWAYSMRGNYEGAIEACKRAIE 72

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              ++      +     +E     + I     A  + +            AK  + Q K 
Sbjct: 73  IDPDFGNPYNDIGSYL-IELGKLDEAIEWLEKAKRAKRYEPRHYPYINL-AKVYMLQGKL 130

Query: 277 RKAEVILEKIWKVNP 291
            +A   +E+  K+ P
Sbjct: 131 YEALREIEEAIKIKP 145



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 51/163 (31%), Gaps = 11/163 (6%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVYSLYFESCRIGDLN 171
              + +    E          + A E     + +  T                   G+  
Sbjct: 7   LKEQAMKLFEEAYKYHMLGDLDKAIELYRKSIDVYPTAEAWTFLGWAYSM-----RGNYE 61

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A     +A++I PD       +    +   +   AI +L + K+  +   R+   + + 
Sbjct: 62  GAIEACKRAIEIDPDFGNPYNDIGSYLIELGKLDEAIEWLEKAKRAKRYEPRHYPYINL- 120

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +     +G +  +  +  E++K+  +   + +   + L   N
Sbjct: 121 -AKVYMLQGKLYEALREIEEAIKIKPDYKPSHMLRHQILGMLN 162


>gi|42521721|ref|NP_967101.1| hypothetical protein Bd0075 [Bdellovibrio bacteriovorus HD100]
 gi|39574251|emb|CAE77755.1| conserved hypothetical protein with TPR-domain [Bdellovibrio
           bacteriovorus HD100]
          Length = 981

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 33/196 (16%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVV----------------------QQYVLAKEW 204
            G+   A   A KA  ++P+   + + V+                       QYV   ++
Sbjct: 466 RGEKKKALEVAQKAFGLNPNNGELRQLVIRLGGTDKVKGDKGRNNELLYLGDQYVRQGDF 525

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A        K A E +       +  +           +     +++K     + A +
Sbjct: 526 LAAQAEF----KAAFEADPKNGTAAMKAAKALWQLNQSFEAIEWLNKAIKAEPKLVSAYV 581

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEE 319
             A  +  +     A  IL    ++ P+       +A         N  G +  ALR  +
Sbjct: 582 LQADYMSQRFDFIGALQILTNAMRIAPNNYEVLRGLAQ--LEFRKNNMPGTVNYALRAAK 639

Query: 320 INKESVESLVIVSKIA 335
                +++ ++++K  
Sbjct: 640 AYDGDIDTYILLAKAN 655



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 89/269 (33%), Gaps = 26/269 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR----IGDLNSAQRYATKALDISPDAP 188
             +Y  A   +E  L+        +  LY           D  +A  Y  KA  +     
Sbjct: 321 AGRYKEAKGTIEATLEGSE-PFSLLPVLYDFKAELLAGEKDYVNAVPYYEKAAQLWEKWL 379

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS-YH 247
               ++ +      +++ A   L +        ++   +           K D   +  +
Sbjct: 380 HPQVSLAEALYHQGDFTTAAGIL-RNVLTKNPKHKEAKVFAGIVEYNGFKKSDTAYAFLN 438

Query: 248 DAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHL 302
             +ES     + I A    ++  A+  + + +K+KA  + +K + +NP+  E+  +   L
Sbjct: 439 SGLESKGRIPSLIEAEGYGAL--AEIFVLRGEKKKALEVAQKAFGLNPNNGELRQLVIRL 496

Query: 303 LSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              + V   K R   L           + +    +  G    A A+   A +  P+    
Sbjct: 497 GGTDKVKGDKGRNNEL-----------LYLGDQYVRQGDFLAAQAEFKAAFEADPKNGTA 545

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMP 390
            + A       + + + + W   A+ A P
Sbjct: 546 AMKAAKALWQLNQSFEAIEWLNKAIKAEP 574



 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 6/166 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            ++  +E +Y+ A +  E + +  P  ++  +  L      +G  + A +    A  + P
Sbjct: 736 AEVYKSEDRYSQAKDIYEKVTEADPRNKKAWL-GLGESEKALGLNDKALKAFLSAAVLDP 794

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                     + Y+    +  AI    + ++    + R                GD   +
Sbjct: 795 TDGEALFQAGKLYLETSRFEEAIQQFKRVQRLNANYPR----THYYIGKAAFASGDFATA 850

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              +    KL  N   + I AA+   ++ +  +         K+ P
Sbjct: 851 LEASKSEKKLNPNVADSYILAAEVFTARRQYAECAAEYSTAMKLRP 896


>gi|262276406|ref|ZP_06054215.1| TPR domain protein [Grimontia hollisae CIP 101886]
 gi|262220214|gb|EEY71530.1| TPR domain protein [Grimontia hollisae CIP 101886]
          Length = 699

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 68/233 (29%), Gaps = 22/233 (9%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    + L  +PDA  V + +         W  A+     K  +A       A +L  +
Sbjct: 33  AREVFEQILSHAPDALPVLQVLAVLDSEDGAWQDAL----NKLNHALSVEPGNASILFDK 88

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI---SQNKKRKAEV-------- 281
           +   A  G    +       L    +         +       + + R+           
Sbjct: 89  AALLAQHGMNREALDIVDALLGAAPDHQELLAMRQQLTAAIGKRGESRRTAKQFIQTRAH 148

Query: 282 ---ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
              ++E   +      +      + S N     +    +  +  ++  +L+ ++K+ ++ 
Sbjct: 149 KNAVIEAEVQET----LTLANQMVASGNLEQAKQLFNAVISVAGDNPAALLGLAKLYIDE 204

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                A    + A      ++  ++L         +        +  L A PD
Sbjct: 205 EKFGLARQNLLRAFNEDDAEKEVVVLLSHSAIKIEDYKAAREHARFGLSAWPD 257



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 72/238 (30%), Gaps = 22/238 (9%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A E  E +L         +  L       G    A      AL + P    +       
Sbjct: 32  EAREVFEQILSHAPDALPVLQVLAVLDSEDGAWQDALNKLNHALSVEPGNASILFDKAAL 91

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-----S 252
                    A+  ++     A +       LL  R    A  G    S   A +     +
Sbjct: 92  LAQHGMNREALDIVDALLGAAPDHQE----LLAMRQQLTAAIGKRGESRRTAKQFIQTRA 147

Query: 253 LKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSE 305
            K     I A    ++  A  +++     +A+ +   +  V   NP   +     ++  E
Sbjct: 148 HKNA--VIEAEVQETLTLANQMVASGNLEQAKQLFNAVISVAGDNPAALLGLAKLYIDEE 205

Query: 306 NTVGKLKRALRLEEINKESVESLV--IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                L R   L   N++  E  V  ++S  A+++     A   A   +   P + +F
Sbjct: 206 KFG--LARQNLLRAFNEDDAEKEVVVLLSHSAIKIEDYKAAREHARFGLSAWPDEPLF 261


>gi|222619750|gb|EEE55882.1| hypothetical protein OsJ_04532 [Oryza sativa Japonica Group]
          Length = 885

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 69/208 (33%), Gaps = 23/208 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +  +S R GD  +A  +       +P        +   Y   +E+   I     K + A 
Sbjct: 42  IARQSYRAGDYKAALEHCNAVYRANPRLLENLLLLGAVYYQLREFDMCI----AKNEEAV 97

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
               N      + +    +KGD+  +    + +++L      A    A +   +    +A
Sbjct: 98  AIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQA 157

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV---------- 329
                +   +NPH  +A+ Y +L        LK A  L           +          
Sbjct: 158 AECCHQALALNPH--LADAYCNL-----GDVLK-AQGLYREAYSHYLDALNIKPTFANAW 209

Query: 330 -IVSKIALEMGSIDQAHAKAMLAMKIAP 356
             ++ + ++ G  ++A      A+K  P
Sbjct: 210 NNIAGLLMQWGDFNKAALYYKEAIKCNP 237



 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 11/185 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD+++A ++   A+ + P        +   Y      S+A    +Q        +  
Sbjct: 115 REKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNP--HLA 172

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A   +   L+   +G    +Y   +++L +      A    A  L+      KA +  +
Sbjct: 173 DAYCNLGDVLK--AQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAALYYK 230

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +  K NP     H  + N+Y   ++      +           E+  +   +     E G
Sbjct: 231 EAIKCNPAFYDAHLNLGNLYK--VTGMRQDAIVCFQNAARAKPENAVAYGNLGNAYHEQG 288

Query: 340 SIDQA 344
            +D A
Sbjct: 289 QLDLA 293


>gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
 gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
          Length = 1217

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 83/231 (35%), Gaps = 12/231 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWV 190
                A    E  LQ+      A+  L      I    D+ +  +  +KA  I    P V
Sbjct: 217 GNLEKARLAFERALQLDPQCVGALVGLAILKLNIQEPEDIRAGVQMLSKAYTIDMSNPMV 276

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   +   K++++ +  L     +  E    RA      +     + D   ++    
Sbjct: 277 LNHLANHFFFKKDYNK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQADYDQAFQYYY 335

Query: 251 ESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304
           ++ +   +  ++      +  I +     A    EK+ K  P        + ++Y +  S
Sbjct: 336 QATQFAPSAFVLPHYGLGQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSLYANSTS 395

Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           ++     K    ++ E   E VE+ + +++I LE   +  A +   +A+KI
Sbjct: 396 QSKREIAKNHLKKVTEQFPEDVEAWIELAQI-LEQSDVQGALSAYGMAIKI 445



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 89/250 (35%), Gaps = 31/250 (12%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           Y+ A +  + +L+           L   +   G ++ A  +   AL I+ D P     + 
Sbjct: 518 YDRAEKLYKDILREHPNYVDCYLRLGCMARDKGQISEASDWFKDALQINNDHPDAWSLLG 577

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIA 244
             ++   EW        +  KN+   +   +++ +            R  E  +K     
Sbjct: 578 NLHLAQMEWGPGQKKFERILKNSSTSSDAYSLIALGNVWLQTLHQPTRDKER-EKRHQER 636

Query: 245 SYHDAIESLKLCDNSIMAS-----ICAAKSLISQNK-----KRKAEVILEKIWKVNPHPE 294
           +     + L+    +I A+     + A K  I++ +      R+A      +W       
Sbjct: 637 ALAMYKQVLRNDPRNIWAANGIGAVLAHKGAINEARDVFAQVREATADFCDVWLN----- 691

Query: 295 IANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           IA+IY       +  ++      +  +     VE L  +++   + G + +A    + A 
Sbjct: 692 IAHIYVEQKQYISAIQMYENCLRKFYKY--PHVEVLQYLARAYFKAGKLKEAKMTLLKAR 749

Query: 353 KIAPRKEIFL 362
           ++AP+  + L
Sbjct: 750 RVAPQDTVLL 759


>gi|156042368|ref|XP_001587741.1| hypothetical protein SS1G_10981 [Sclerotinia sclerotiorum 1980]
 gi|154695368|gb|EDN95106.1| hypothetical protein SS1G_10981 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 528

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 57/191 (29%), Gaps = 9/191 (4%)

Query: 108 SYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFES 164
           S +S      +  +  LL      LA+ + N A    ++ +    +   +          
Sbjct: 24  SALSANDIPSDTPISSLLASANAHLAKGETNDALTYYDIAIARDPSNYLSHFRRG--AAY 81

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKE 220
             +G +  A +   K L I P          +      +W  A    +     +    + 
Sbjct: 82  LSLGRMAQAAQDFDKVLTIKPGHEPALSQRAKIRAKNGDWENAKQDYLALGASQGAEEEL 141

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            N   A    + +++     +       A  ++ +    +      A     + + ++  
Sbjct: 142 ANLIEAQGAASLAMDAEKSQNWEECVTQAGAAIMVASKVVSLRKTRAHCRFERGEVQEGM 201

Query: 281 VILEKIWKVNP 291
             L+ + ++ P
Sbjct: 202 SDLKHVLQMQP 212


>gi|149062745|gb|EDM13168.1| rCG47511 [Rattus norvegicus]
          Length = 453

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 87/236 (36%), Gaps = 29/236 (12%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            + + +  + P  +      L  +   +G+ + A+ +  +AL  +    +V     + + 
Sbjct: 188 RKAVRLNPEDPHLKVL----LALKLQDLGEQDEAETHIEEALSSTSCQSYVFRYAAKYFR 243

Query: 200 LAKEWSRAITFLNQKKKNAKEW---NRNRAILLIARSLENADKGDMIASYHDAI------ 250
              + + A+  L++  + +      +  + +    + ++    G+  A   + I      
Sbjct: 244 RKGDINEALHLLHRALQTSPSSGYLHYQKGLCYKQQMIQLKTSGNRQARRQENIQELAHQ 303

Query: 251 ------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                 E+L L     MA +C A+      +  +AE   ++   +N      N+  H+  
Sbjct: 304 AICEFQETLNLRPTFEMAYVCMAEMQAEIGQYEEAEGNFQEALNLN------NLVAHIE- 356

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           ++   +  R  +  + +++   +  +     L++     A  K + A++    + +
Sbjct: 357 QDIHFRYGRFQQFHKKSEDKAITHYLKG---LKLEEKSFAWRKLLTALEKVAERRV 409


>gi|312218032|emb|CBX97978.1| similar to DnaJ (Hsp40) homolog [Leptosphaeria maculans]
          Length = 516

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 85/280 (30%), Gaps = 41/280 (14%)

Query: 106 MHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPA---TREFAVYSL 160
           +   +S      +  +  L++   + LA  + + A    +  + + P    T        
Sbjct: 18  LACALSAADIPADLPVSQLIKDAGVKLATGETHDALTYFDVAISRDPQNYMTYF--RRG- 74

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                 +G    AQ    K L++ P          +      +W+ A        K A+ 
Sbjct: 75  -AAYLSLGRTTQAQHDFDKVLELKPGFEGALVQRAKIKARKADWAAARKDYEAAGKTAEI 133

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              + A      + E ADKGD  A    A  ++ +   +       A+    + +     
Sbjct: 134 AELDEAQGAAILAQEAADKGDWEACVSHAGTAIVVAGGAHDIRKLRARCRFEKGE----- 188

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMG 339
            ++E                          +     L +IN   +E  +   +     +G
Sbjct: 189 -VIEG-------------------------ISDLQHLLQINTGDIEPHLQSSAMAFYSLG 222

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             ++        ++  P  ++ + L + E++   +  K+ 
Sbjct: 223 ETEKGLKHIAQCLQSDPDSKVCMKLRRREKSLEKSLKKVR 262


>gi|157812778|gb|ABV81134.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Cydia pomonella]
          Length = 287

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVVDAEECYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++ + A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|71735966|ref|YP_273350.1| hypothetical protein PSPPH_1080 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556519|gb|AAZ35730.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320325777|gb|EFW81838.1| hypothetical protein PsgB076_05233 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320327307|gb|EFW83321.1| hypothetical protein PsgRace4_26251 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330879640|gb|EGH13789.1| hypothetical protein Pgy4_14969 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 656

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 7/123 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL+ R       GD   +  D  ++  L   ++      A       +  +A   L
Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAVMGQPNEALQRL 302

Query: 284 EKI 286
           +K 
Sbjct: 303 QKA 305


>gi|28198965|ref|NP_779279.1| porphyrin biosynthesis protein [Xylella fastidiosa Temecula1]
 gi|182681677|ref|YP_001829837.1| HemY domain-containing protein [Xylella fastidiosa M23]
 gi|28057063|gb|AAO28928.1| porphyrin biosynthesis protein [Xylella fastidiosa Temecula1]
 gi|182631787|gb|ACB92563.1| HemY domain protein [Xylella fastidiosa M23]
          Length = 389

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 60/367 (16%), Positives = 124/367 (33%), Gaps = 19/367 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56
           +  L  +FF++ L I S   +   P     DV I  G   Y T+      +L   +    
Sbjct: 4   LRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVLLLW 63

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
            L ++    +        +  +  Y +G+  L  GL ++      LA ++    S+    
Sbjct: 64  SLRSLLVLPI-------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEV 116

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L     +++A     ++ A+     + +   T    + S    + +  +       
Sbjct: 117 SAIALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLD 174

Query: 177 ATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           A +   + P         ++Q     + +S   T   Q+  +  E+ R     +     +
Sbjct: 175 ALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQ 234

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHPE 294
             D   +   +    ++LK   N +      A  L  +N    + E  LE+ W  N    
Sbjct: 235 AKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN---- 290

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y  L  +    +  RA     ++ +S   L+ + ++AL      QA      A+  
Sbjct: 291 LIRLYGFLPLKEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALRQQEYSQAETFLRRAIDK 350

Query: 355 APRKEIF 361
               E +
Sbjct: 351 ETNAETW 357


>gi|294084873|ref|YP_003551633.1| TPR repeat-containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664448|gb|ADE39549.1| TPR repeat protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 768

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 23/208 (11%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +  +     D   A     +A+ + PD       +          S A     Q     
Sbjct: 201 GVILQKLVRLDEAEASY--KQAIALQPDYAEAHGNLAATLQECGRLSEAEASYKQAIALQ 258

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            ++    A      +    D G +  +    ++ + L             + I+    R+
Sbjct: 259 PDY----AKAHFNLASTLHDLGRLDEAEVSYMQVIALIPTFT-------DAHINLGITRQ 307

Query: 279 AEVILEKIWKVNPH-----PEIANIYTHLLSE-NTVGKLKRALRLE----EINKESVESL 328
           +   L+       H     P+ A  + +L S  + +G+L  A         +  +  ++ 
Sbjct: 308 SLAKLDAAEANFKHAIVLQPDYAKAHFNLASTLHDLGRLDEAEASYEQAIALQPDYAKAH 367

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             ++    E+G +D+A A    A+ + P
Sbjct: 368 FNLAGTRRELGRLDEAEASYNDAIALQP 395



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 84/250 (33%), Gaps = 24/250 (9%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A  +     A    + +LQ       A ++L   +  +G   +A +   KALD++P   
Sbjct: 14  AAHNQGNLQKAERIYQAILQSQPKHPDANHNLGLIAIAMGKSETALQLFQKALDVNPKVE 73

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----------ARSLENA 237
               + V   +   +   A   + + KK   +  +  A+ L               L++ 
Sbjct: 74  QFWLSYVDALIKNNQIKDAKRAIKKAKKIGFDSQKLEALSLSPKLPVAGKTPPQAQLDSL 133

Query: 238 DKGDMIASYHDA-IESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNP- 291
            K      Y DA  ++L L            +  A  L   N+  +A   ++    ++P 
Sbjct: 134 LKCYQAGQYGDAEKQALSLTKTFPRHQFGWKVLGA-ILGQTNRNAEALTAIQMTVTLSPK 192

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
               H  +  I   L+  +         +   +  +  E+   ++    E G + +A A 
Sbjct: 193 DAEAHCNLGVILQKLVRLDEAE--ASYKQAIALQPDYAEAHGNLAATLQECGRLSEAEAS 250

Query: 348 AMLAMKIAPR 357
              A+ + P 
Sbjct: 251 YKQAIALQPD 260


>gi|262305001|gb|ACY45093.1| acetylglucosaminyl-transferase [Ischnura verticalis]
          Length = 276

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVSEAEECYNTALRLCPSHADSLNNL--ANIKREQGFVEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 74/185 (40%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|262304975|gb|ACY45080.1| acetylglucosaminyl-transferase [Craterostigmus tasmanianus]
          Length = 288

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +P A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVPDAEECYNTALRLCPSHADSLNNL--ANIKREQGFTEDATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPDAIASYRTALKLKPDFPDAYCNLAHCL 200



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVPDAEECYNTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFTEDATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I  A A    A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPDAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|114569845|ref|YP_756525.1| peptidase M48, Ste24p [Maricaulis maris MCS10]
 gi|114340307|gb|ABI65587.1| peptidase M48, Ste24p [Maricaulis maris MCS10]
          Length = 453

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 5/161 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           H+  L R +    S           + L  Q+     +   A       +++  T     
Sbjct: 280 HDARLERALEEIASLLAEEPENPYFHELHAQMLFESGRPGQAIAPNRRSVELEPTAPLLR 339

Query: 158 YSLYFESCRIGDL---NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +L        D      A +    ALDI PD  +    +   +    +   A+  L   
Sbjct: 340 INLATSLIATDDPDHLEEASQNLRVALDIEPDNGFAWYQLSIVHERNGD--TALAQLAIA 397

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +++    NR RA    +R+    + G         IES+ L
Sbjct: 398 EQSYAAGNRQRAHQFASRARTALEIGTPAWVRATEIESVSL 438


>gi|332141193|ref|YP_004426931.1| response regulator receiver protein [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551215|gb|AEA97933.1| response regulator receiver protein [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 561

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 23/204 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           +  L + +   A   ++ +LQ P TR      L          + A     +A  ++P  
Sbjct: 214 RSLLRQDELEEAQLLVDDLLQRPDTRFLTYDLLAQYFIEKEQFDIAYEQMKEASRLAPRN 273

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---------EWNRNRAILLIARSLENAD 238
               + +     L  +    ++ +    K AK           N  R+ + +A SL N +
Sbjct: 274 IERNKRLWDLARLNHDKKGQLSAVQNMAKFAKNSIHDSPQLTLNVIRSTIDLATSLGNTE 333

Query: 239 KGDMIASYHDAIESLKLCDNSIM-----ASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
               +      +E LK              +  A+ L  ++ KR AE +++         
Sbjct: 334 TERYLQKAESELEELKQQKGMQSQLGEQIDVVKARVLCLRDDKRSAEKLMK--------- 384

Query: 294 EIANIYTHLLSENTVGKLKRALRL 317
           + +     L  E+++ K+K    L
Sbjct: 385 DRSASTEGLSMEDSLDKMKAFHEL 408


>gi|329847987|ref|ZP_08263015.1| bacterial type II and III secretion system family protein
           [Asticcacaulis biprosthecum C19]
 gi|328843050|gb|EGF92619.1| bacterial type II and III secretion system family protein
           [Asticcacaulis biprosthecum C19]
          Length = 545

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 31/213 (14%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSA 173
                 L++ + AL     + A              P  +     +L + +   GD  + 
Sbjct: 35  QPAGARLMQARDALMAGDTSTAMAGFGDAAARNPNDPNAQTLL--ALTYHAAAKGDPET- 91

Query: 174 QRYATKALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A    D++     DA W      +       +  A  +  +      +  R     L
Sbjct: 92  LDLAAAGYDLALRSDQDAFWAAALAGKAVYDRGRYEEAQGYFARAVMMRPDDTR----AL 147

Query: 230 IARSLENADKGDMIASYHDAIESLKL---CDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +A S+     GD   +   A    +L         A   +  +  +    RKA     + 
Sbjct: 148 LALSMSAYMSGDPQLAALAAERVTQLPADAQTHAEAVRLSGLAYAATG--RKA-----EA 200

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
           W+          Y  L  E       R   L  
Sbjct: 201 WQSY------ARYAELRPEAAAPMHVRISDLVR 227



 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWN 222
           +C I    SA   A  +           +A++     A + S A+    +   +N  + N
Sbjct: 18  ACAITQPPSALGMAAHSQPAGARLMQARDALM-----AGDTSTAMAGFGDAAARNPNDPN 72

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               + L   +    D   +  +      +L+   ++  A+  A K++  + +  +A+  
Sbjct: 73  AQTLLALTYHAAAKGDPETLDLAAAGYDLALRSDQDAFWAAALAGKAVYDRGRYEEAQGY 132

Query: 283 LEKIWKVNP--HPEIAN----IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             +   + P     +       Y     +      +R  +L    +   E++ +      
Sbjct: 133 FARAVMMRPDDTRALLALSMSAYMSGDPQLAALAAERVTQLPADAQTHAEAVRLSGLAYA 192

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEI 360
             G   +A        ++ P    
Sbjct: 193 ATGRKAEAWQSYARYAELRPEAAA 216


>gi|254368871|ref|ZP_04984884.1| conserved hypothetical protein [Francisella tularensis subsp.
          holarctica FSC022]
 gi|157121792|gb|EDO65962.1| conserved hypothetical protein [Francisella tularensis subsp.
          holarctica FSC022]
          Length = 385

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M++  +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKFFKLIIAVALATLVGIWATKYHGYIMLVLADKNIKMNLVAFVFITFILLFILILCVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|88604422|ref|YP_504600.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
 gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 565

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 23/266 (8%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA---TREFAVY 158
           A+ + +  S      +    Y    +          A    E  +   P    TR     
Sbjct: 205 AQAIDALQSALTLDPSNAGAYYEMGRAYEKLGNRTAARNYYETAIKLNPDNVWTRFVYGK 264

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L       GD  SA +    +L  S         +   Y    ++ +A+  +N      
Sbjct: 265 NLAI----SGDYESAIKELKTSLKGSSCQASAWYELANAYYQTGQYDQALEAINSALTID 320

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                 RA+ L  R+ ++     +      A+++ +       AS+   +  I+ +  R 
Sbjct: 321 PYTKEYRALYLSIRAAQDPASWSLQNVTKRAVDAPEN------ASVWFYQGAIAYHDGRY 374

Query: 279 AEVI--LEKIWKVNP-HPEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIV 331
           A+ +  L     ++P +PE    Y   +++  +G+    L    +   ++  +  +    
Sbjct: 375 ADALTYLTSAVSLDPMNPE--AWYYRGVTQYELGRYQDALCSFDKTILLDPGNAWAYYYR 432

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
             I  + G  + A A     +++ P 
Sbjct: 433 GDILQKGGQCEYAIAYLNKGIQLDPT 458



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 4/124 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A + L+  L +  +   A Y +     ++G+  +A+ Y   A+ ++PD  W    
Sbjct: 202 GNYAQAIDALQSALTLDPSNAGAYYEMGRAYEKLGNRTAARNYYETAIKLNPDNVWTRFV 261

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +   ++ ++  AI  L    K     +  +A      +      G    +      +L
Sbjct: 262 YGKNLAISGDYESAIKELKTSLK----GSSCQASAWYELANAYYQTGQYDQALEAINSAL 317

Query: 254 KLCD 257
            +  
Sbjct: 318 TIDP 321



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 94/302 (31%), Gaps = 23/302 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---PATRE 154
            +   A  +H+             + L +  + + + + + A+  +  +L I     T  
Sbjct: 67  GDNEGA--IHAITRAAEFSPGNSTILLAKAHLHITKGERDQANRAILKVLDILPGNKTAL 124

Query: 155 FAVYSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             + SL        +  +   Y      L I P+  W      +      +   A+ +  
Sbjct: 125 DLLSSL------RMNTTTPLNYILVEHDLLIEPNNTWSAFNKGRLLFEEGKHREALAWFI 178

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +       +++  A           + G+   +      +L L  ++  A     ++   
Sbjct: 179 KA----TTYDQKNAPAWYFTGTTYTELGNYAQAIDALQSALTLDPSNAGAYYEMGRAYEK 234

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESL 328
              +  A    E   K+NP   +   + +     +S +    +K      + +     + 
Sbjct: 235 LGNRTAARNYYETAIKLNPD-NVWTRFVYGKNLAISGDYESAIKELKTSLKGSSCQASAW 293

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALH 387
             ++    + G  DQA      A+ I P  + +  L   I  A    +  +   T+ A+ 
Sbjct: 294 YELANAYYQTGQYDQALEAINSALTIDPYTKEYRALYLSIRAAQDPASWSLQNVTKRAVD 353

Query: 388 AM 389
           A 
Sbjct: 354 AP 355



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 14/199 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD   A    T+A + SP    +  A    ++   E  +A   +  K  +    N+ 
Sbjct: 64  KEQGDNEGAIHAITRAAEFSPGNSTILLAKAHLHITKGERDQANRAI-LKVLDILPGNKT 122

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              LL +  +      + I   HD +    +  N+  ++    + L  + K R+A     
Sbjct: 123 ALDLLSSLRMNTTTPLNYILVEHDLL----IEPNNTWSAFNKGRLLFEEGKHREALAWFI 178

Query: 285 KI--WKVNPHPE---IANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           K   +     P        YT L +    +  L+ AL L   +  +  +   + +   ++
Sbjct: 179 KATTYDQKNAPAWYFTGTTYTELGNYAQAIDALQSALTL---DPSNAGAYYEMGRAYEKL 235

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G+   A      A+K+ P 
Sbjct: 236 GNRTAARNYYETAIKLNPD 254


>gi|89256047|ref|YP_513409.1| hypothetical protein FTL_0656 [Francisella tularensis subsp.
          holarctica LVS]
 gi|115314525|ref|YP_763248.1| hypothetical protein FTH_0659 [Francisella tularensis subsp.
          holarctica OSU18]
 gi|156502059|ref|YP_001428124.1| hypothetical protein FTA_0692 [Francisella tularensis subsp.
          holarctica FTNF002-00]
 gi|167010195|ref|ZP_02275126.1| hypothetical membrane protein [Francisella tularensis subsp.
          holarctica FSC200]
 gi|254367387|ref|ZP_04983413.1| hypothetical protein FTHG_00615 [Francisella tularensis subsp.
          holarctica 257]
 gi|290954239|ref|ZP_06558860.1| hypothetical protein FtulhU_08364 [Francisella tularensis subsp.
          holarctica URFT1]
 gi|295312359|ref|ZP_06803144.1| hypothetical protein FtulhU_08351 [Francisella tularensis subsp.
          holarctica URFT1]
 gi|89143878|emb|CAJ79096.1| hypothetical membrane protein [Francisella tularensis subsp.
          holarctica LVS]
 gi|115129424|gb|ABI82611.1| conserved hypothetical protein [Francisella tularensis subsp.
          holarctica OSU18]
 gi|134253203|gb|EBA52297.1| hypothetical protein FTHG_00615 [Francisella tularensis subsp.
          holarctica 257]
 gi|156252662|gb|ABU61168.1| hypothetical protein FTA_0692 [Francisella tularensis subsp.
          holarctica FTNF002-00]
          Length = 385

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M++  +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKFFKLIIAVALATLVGIWATKYHGYIMLVLADKNIKMNLVAFVFITFILLFILILCVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|299149456|ref|ZP_07042513.1| TPR-repeat-containing protein [Bacteroides sp. 3_1_23]
 gi|298512643|gb|EFI36535.1| TPR-repeat-containing protein [Bacteroides sp. 3_1_23]
          Length = 272

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 9/170 (5%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +A   L Q  K  +  N   A+L     L     G+   +      +L     ++   + 
Sbjct: 39  KAEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLD 97

Query: 266 AAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEI 320
            A   +   K  +A      +L++  K N    +   Y + L  +    ++    RL E+
Sbjct: 98  RAAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARMD-YNRLLEL 155

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
           + +S    + ++ +  + G   +A       +   P    +++  A +E+
Sbjct: 156 DPQSYSGRLGLATLEQKEGKFREALEILNKMITATPDDATLYIARADVER 205



 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 6/166 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           + L    I +   + + A+    +++ +    +E  +   Y    R  D  +A+    + 
Sbjct: 94  ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARMDYNRL 152

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L++ P +      +        ++  A+  LN+      +     A L IAR+    +  
Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMITATPD----DATLYIARADVEREMK 208

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  D  E+++L   S  A +      ++Q KK  A+   EK 
Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLTQKKKGLAKADFEKA 254


>gi|163781658|ref|ZP_02176658.1| hypothetical protein HG1285_02208 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882878|gb|EDP76382.1| hypothetical protein HG1285_02208 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 159

 Score = 45.3 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 11/153 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKAL 181
           E          + A E  +  +++  T                    D + A  Y  KA+
Sbjct: 14  EAYTHHMLGDIDKAIELYKQSIEVQPTAKAYTFLGWAYSMK-----KDYDKAIEYCKKAI 68

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           +I PD       +    +    +  AI +L Q         R+   + +AR       G 
Sbjct: 69  EIDPDFGNPYNDIGAYLIEQGRFEEAIPWLKQAIVAKNYEPRHFPRINLAR--IYTAMGK 126

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +  +  +  E+LK+      A +   + L   N
Sbjct: 127 LYDALREVEEALKIDPEYKPAHVLRHQILGMLN 159


>gi|194333673|ref|YP_002015533.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
 gi|194311491|gb|ACF45886.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 199

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 72/188 (38%), Gaps = 17/188 (9%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             A+++S         +   Y+  + +S AI  L+         +RN    L +RS+ + 
Sbjct: 9   EAAVNVSHPLSEDRYELALAYIDRERYSEAIAQLDAIL----VMSRNHVNALYSRSIAHM 64

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--- 294
             G    + +D +  + L    + A        ++  K+  A   L+K   ++  P+   
Sbjct: 65  SSGHYRQAGNDLLRVVTLDRAFLPAYKSLGYIQLTLGKEEAAVKTLQKAIAID--PDYVD 122

Query: 295 ----IANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
               +++ +  L  ++  +  + +AL L   + E  E    ++   L  G   +  A+  
Sbjct: 123 AYCVLSDAFMDLGRNDEALEMINKALEL---DPEGEEPHCKMAMYCLARGDFKRLRAEQE 179

Query: 350 LAMKIAPR 357
           +  ++ P 
Sbjct: 180 ILQRLNPD 187


>gi|163857328|ref|YP_001631626.1| hypothetical protein Bpet3016 [Bordetella petrii DSM 12804]
 gi|163261056|emb|CAP43358.1| hypothetical protein predicted by Glimmer/Critica [Bordetella
           petrii]
          Length = 1133

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 4/193 (2%)

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
            L+ P               +K L   L       +  AR   +         ++  +++
Sbjct: 6   LLTLPQAQARTRRFPLDLHAWKELGRNL--CNVGELDQAR--AAVEKALELAPDDPQIWI 61

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  QI     Q   A    E  + +      A + L     R+ D + A ++  +AL+ S
Sbjct: 62  LLGQIETRADQDRKARGHFEHAISLQEKLPGAHHGLAAVLLRLNDCDGALKHIERALEYS 121

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    +             +  A   L +  +   +        L     +        A
Sbjct: 122 PGQSAIKAQKSIILSRNYRYEEAGALLKELLEEDPKNAFAHWTNLGNIQRDLGKLEHAEA 181

Query: 245 SYHDAIESLKLCD 257
           SY  A+E      
Sbjct: 182 SYRQAVELQPASP 194


>gi|329847188|ref|ZP_08262216.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
 gi|328842251|gb|EGF91820.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
          Length = 527

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 49/147 (33%), Gaps = 5/147 (3%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E  + G  + A+    KAL   P +           + +K+   A+  L   +  +    
Sbjct: 52  EWLQAGQTDQARIEVEKALKTDPRSSVAYSVRAMIRMNSKDLDGALADLTTAQGLSP--- 108

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            N A      ++    + D+  +   A ++  L  +  MA       L       +AE  
Sbjct: 109 -NDAQNYFLAAVIYMQREDLPRALTAANKAADLAPDDAMAQGMRIVLLGVTGDTAQAEDK 167

Query: 283 LEKIWKVNPH-PEIANIYTHLLSENTV 308
               +   P+ PE A +   + +E   
Sbjct: 168 AVAWFTAQPNSPEAAQVLAGIYAETNR 194


>gi|323447882|gb|EGB03789.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
          Length = 971

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 52/176 (29%), Gaps = 10/176 (5%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPD 186
               +     A +  +  +   P       +  L        D   A R    A+ + P+
Sbjct: 246 AMQEQGNLIEAKQCYQTAIRLRPD--FAIAHGNLGSCLLTSHDAEGAVRALRHAIQLEPN 303

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P     +            AI       +   +     + L  A      D+G +  + 
Sbjct: 304 FPDAYNNLGNALRSLAHMREAIACYRTALRLKPDHPHAYSNLGTAM----RDRGLIREAI 359

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           H  + + +L  +   A       L  Q +  +A     +   ++  P+ A  YT+L
Sbjct: 360 HCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALD--PDFAEAYTNL 413



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 88/264 (33%), Gaps = 13/264 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            + P   + +    +      +    L    + L   Q + A E  +M L I      A 
Sbjct: 115 GDYPGTLRFYLKAIKYKPRFGDAYNNLATAHMHL--GQVSDAIETYQMGLVIDPGLVDAH 172

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L       G L +A+R   +A+ ++P        +   +    + S AI +  +  + 
Sbjct: 173 CNLGNLLKAQGKLEAARRCYLEAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRL 232

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +    A +         ++G++I +      +++L  +  +A       L++ +   
Sbjct: 233 CPPF----ADVYSNLGSAMQEQGNLIEAKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAE 288

Query: 278 KAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            A   L    ++ P+ P+    + N    L        +        +  +   +   + 
Sbjct: 289 GAVRALRHAIQLEPNFPDAYNNLGNALRSLAH--MREAIACYRTALRLKPDHPHAYSNLG 346

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
               + G I +A    + A ++ P
Sbjct: 347 TAMRDRGLIREAIHCNVTAARLMP 370



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 12/225 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A +  + +   P   E    +L      +GD     R+  KA+   P        +  
Sbjct: 85  QQARDYHDAIRIEPQMAEA-YSNLANALKELGDYPGTLRFYLKAIKYKPRFGDAYNNLAT 143

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            ++   + S AI           +     A   +   L+   +G + A+    +E+++L 
Sbjct: 144 AHMHLGQVSDAIETYQMGLV--IDPGLVDAHCNLGNLLK--AQGKLEAARRCYLEAIRLN 199

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKL 311
               +A    A     + +   A     +  ++ P P  A++Y++L        N +   
Sbjct: 200 PAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLCP-P-FADVYSNLGSAMQEQGNLIEAK 257

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +       +  +   +   +    L     + A      A+++ P
Sbjct: 258 QCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQLEP 302


>gi|194333366|ref|YP_002015226.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
 gi|194311184|gb|ACF45579.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 582

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 2/114 (1%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             + + +    +L I      A+ +L Y  +   GDL+ A  YA KA+   PD P   + 
Sbjct: 466 DMDKSRQAYIAVLDIDPENPLALNNLAYMMAESGGDLDKALEYALKAVAEEPDNPVFLDT 525

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDMIASY 246
           +   Y    E+  A  +L +  +   +       L  + ++L + +K +     
Sbjct: 526 LGWVYAQRGEYDNAKGYLEKAVQQKPDEPEIYQHLSEVYKALGDEEKAEAYRQK 579



 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 79/238 (33%), Gaps = 14/238 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             I   ++ Y +A  + + + ++  +    +YSL       G+   A +   + L   P 
Sbjct: 140 AAIYHEQKSYELAAREFQTLSELDPSNITVLYSLAQSYLSAGEGGKALKVYLRILRFDPS 199

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  ++   +   ++  AI  L    +   +  + R  L      E   + D     
Sbjct: 200 DERTLSRILWLELKLHQYREAIATLRSLIRQVPDNQKLRLTL-----GELYLQIDEPQKA 254

Query: 247 HDAIESL-KLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-----KVNPHPEIANIY- 299
            +  E+L +     + A +        Q    + +  L + +      +N   E+A ++ 
Sbjct: 255 IEIFEALARDHPAFLPAWVDLLGVRAEQGDPLRFQECLNRYYSLDHVTLNQKIELARLFM 314

Query: 300 --THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             + L    T   L    R+     +++  L++ + +        +A       +++ 
Sbjct: 315 IRSELDGIYTAPALVMLERIASEEPDNLNVLLMRAMLYSRQERYQEAREGLTRVLELD 372


>gi|163745675|ref|ZP_02153035.1| TPR domain protein [Oceanibulbus indolifex HEL-45]
 gi|161382493|gb|EDQ06902.1| TPR domain protein [Oceanibulbus indolifex HEL-45]
          Length = 569

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 1/171 (0%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             LL   +     ++++A  + + +         A         R G    A     +  
Sbjct: 292 ALLLTASLLENLGEHDLAIAEYKSLPPNSPAYHAAELGRAEALRRSGKTAQAIEVLEQLA 351

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                   V   +       +++  AI   +Q      E  R R +L  AR++     GD
Sbjct: 352 RSHGSLAVVHSTLGDMLRAEEDYEAAIASYDQALDLTAETARARWVLFYARAIAKERSGD 411

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVILEKIWKVNP 291
              S  D   +LKL             SL+ Q +   +A  ++E+    +P
Sbjct: 412 WEGSEADFRAALKLNPEQPQVLNYLGYSLVEQQRSLDEALDMIERAVAASP 462


>gi|78222387|ref|YP_384134.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78193642|gb|ABB31409.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 563

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPA------TREFAVYSLYFESCRIGDLNSAQR 175
             L + +   A+     A      +++              ++         GD+  A +
Sbjct: 443 TNLGQGEWLEAKGDIGKAEALYREIVERQPENPWGWLALGGLHG------SRGDVTRAGK 496

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILL 229
              +A+ + P       A+    +   +   A       K    ++     R R ++ 
Sbjct: 497 AFERAISLVPAHVPAYLALGDLRLEEGDQRGAKQLYETAKRLNPRDTDVGERLRMVVA 554


>gi|107022599|ref|YP_620926.1| hypothetical protein Bcen_1046 [Burkholderia cenocepacia AU 1054]
 gi|116689548|ref|YP_835171.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424]
 gi|105892788|gb|ABF75953.1| Tetratricopeptide TPR_2 [Burkholderia cenocepacia AU 1054]
 gi|116647637|gb|ABK08278.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia
           HI2424]
          Length = 275

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 47/163 (28%), Gaps = 14/163 (8%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL      A  QY+        +L  P         L   +   GD   A +   +
Sbjct: 90  PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLEQ 148

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++P        +    +   + + A   L +      E  +    +L    L     
Sbjct: 149 ATALAPTDAATLSDLAYSKMREGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLAT 204

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           G    +    ++  KL          A ++ I  ++ + A  +
Sbjct: 205 GHAKDARRL-MDQQKLSP--------AVRNQIRDDETKVAAAM 238


>gi|330965039|gb|EGH65299.1| hypothetical protein PSYAC_10376 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 507

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 17/208 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD  +A   A  A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL  R       GD   +  D  ++  L   ++      A    +  + ++A   L
Sbjct: 246 NDATLLAQRGQLRQRLGDRDGARKDFAQA--LAVGNLPLRE-QASLYAAMGQPKEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVESLVIVSK 333
           +K        P  E+   Y    + +  G L   KR  R   +      ++  S +  S 
Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYSAMRSSD 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            A  +    +            P +++F
Sbjct: 363 DAQAIAYFKRVLDYQQTGDLQMPDQQVF 390


>gi|298242645|ref|ZP_06966452.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297555699|gb|EFH89563.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 484

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 79/267 (29%), Gaps = 37/267 (13%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A A   Y  A E  E  +        A Y+L      +GD   A     +A+D+ P+   
Sbjct: 45  AAANEDYETAAECFERAVAADPEDARARYNLALAQQYLGDTELAIAGYRRAIDLDPNLID 104

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y     +  ++    Q  +   + +           L   D   +   Y DA
Sbjct: 105 SYINLGNLYGEIGMYEESLETFQQGLELDPQSDELY--------LSVGDTYRLQNLYRDA 156

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
           I++ +        +  AA +L                                   +   
Sbjct: 157 IQAYRQALMLNPDNTLAADNLRD---------------------------VRERVNDQYR 189

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLLAQIE 368
           ++    R  + +         ++ I L+M   D+A + A   + + P+    + +LA + 
Sbjct: 190 RMMEQERRIDEDPADPTRYAELASIQLDMHRYDEALSLANQMIALDPQGRAGYDMLAAVY 249

Query: 369 QANSHNTDKILYWTQSALHAMPDP-LW 394
           +           + + A     DP  W
Sbjct: 250 EQMGDAEQAAEIYQRIANQYPEDPDAW 276


>gi|221106374|ref|XP_002163424.1| PREDICTED: similar to polaris, partial [Hydra magnipapillata]
          Length = 867

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEV-------QIALAERQYNIAHEKLEMMLQIPATREFA 156
           +KM  +      FH   LV            QI   ++    A E  + +L I  T    
Sbjct: 567 KKMSKFDEALECFHKLNLVLPNNAEVICQIGQIYENDKNTAEALEWYQQLLNIVPTDCEV 626

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLN 212
           +  +       GD + A +Y  +A    P       W+    +    +     +AIT+  
Sbjct: 627 LRKVAMLYEEDGDKSQAFQYMYEAFRYYPSCIKTLVWLGGYYIDAQFIE----KAITYFE 682

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           +  +      R   +L           G+   +     E  K   
Sbjct: 683 RAVQVQPLEVRWHLMLATCYRK----AGNYTQAMETYKEIHKKFP 723


>gi|195126359|ref|XP_002007638.1| GI13051 [Drosophila mojavensis]
 gi|193919247|gb|EDW18114.1| GI13051 [Drosophila mojavensis]
          Length = 1205

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 166 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERA 223

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 224 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 282

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 283 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 337

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 338 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 397

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  +      A  I   K  + + A+I
Sbjct: 398 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 452



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 71/240 (29%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 312 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 371

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    + 
Sbjct: 372 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 431

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A+  LE                 
Sbjct: 432 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKLAKDTLESA--------------- 476

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    E + +  ES        ++++   M   D A       +K  P
Sbjct: 477 ---------LKHASSEMEKDVKYYESIQVTMKYNLARLNEAMSCFDVADKLYKEILKEHP 527


>gi|121997016|ref|YP_001001803.1| hypothetical protein Hhal_0207 [Halorhodospira halophila SL1]
 gi|121588421|gb|ABM61001.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila
           SL1]
          Length = 796

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 79/262 (30%), Gaps = 41/262 (15%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            LL+          + A   +  +L      P  R         ++   G + +A+ +  
Sbjct: 149 QLLDAAALTDSGALHGAEAVVRGLLAESPDDPGLRLQL--GDLLQAQ--GRIYAAEHHYA 204

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           + L  +PD     E +  + +  +  +                    A   +A + +   
Sbjct: 205 RLLADTPDQTLAAERL--RRLPHRGPAEPADTPEPIAPQEAPAAPQTARDHLATAEQALQ 262

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
            GD+ ++      +L+L      A    A+ LI++N   +AE  L+++            
Sbjct: 263 GGDIASAEQAVRRALELEPELTRADYLLAEVLIARNALAEAEEQLQQV------------ 310

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                                   ++ E+ + ++++A   G  D+A           P  
Sbjct: 311 -------------------ATRFPDATEARLNLARLASWQGDYDRALDHYDALAAEHPTD 351

Query: 359 EIFLLLAQIEQANSHNTDKILY 380
             F L A      +   D+   
Sbjct: 352 PTFPLEAARLAGWAGEPDQARE 373


>gi|262200020|ref|YP_003271229.1| hypothetical protein Hoch_6872 [Haliangium ochraceum DSM 14365]
 gi|262083367|gb|ACY19336.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
            14365]
          Length = 1459

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 90/286 (31%), Gaps = 21/286 (7%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCR 166
              + +       +   L +Q    +R    A    E +L    P     A    ++   R
Sbjct: 1150 KSAAEAAPERSDIGLRLAIQYEKLDRDEEAA-AAYEQLLSTSSPTVDTLARAGRFYA--R 1206

Query: 167  IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             G  + A     + L I   A      + +      E + A     +     ++     A
Sbjct: 1207 QGQTDKAGEIGERILAIKDTAAAGHYLLGEGQFAQGEHAAARDSFRRAADIEQDPQYLEA 1266

Query: 227  ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                A  +E  D+     ++    E+ +     I   +  A+ LI++   ++A   LE +
Sbjct: 1267 TARAAERMELYDE-----AFEAYSEASRRAPEYIAPRLGRARLLIARRDFQRATEELEDL 1321

Query: 287  WKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             K+ P+      Y        E     +        I+    E+   + K  +E G    
Sbjct: 1322 RKIAPNEASVFHYLGESLQAQEKHKEAISYFRTALGIDGRRAETHYRLGKSYIERGDERD 1381

Query: 344  AHAKAMLAMKIAPRKE--------IFLLLAQIEQANSHNTDKILYW 381
            A ++   A +IA             +  L  +++A S   + +  W
Sbjct: 1382 AASEFTTATQIARNSATPPSWLVDAYYELGYVQRALSRRGEAVRAW 1427



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 95/299 (31%), Gaps = 25/299 (8%)

Query: 72   LFHMLHKRNYDKGYKALYTGLMS----IAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLE 126
            L  +   +      + L    +     + A        + +Y        ++ L   L  
Sbjct: 1005 LERVFAAKEQIDDRRGLSRAYVMQGQILGADESQREAAIAAYEEALTLAGDDALESALAL 1064

Query: 127  VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
              +     +   A   L  + +  A+   A  +L     R      A+ +  KAL++ P 
Sbjct: 1065 ADLYTLLGRMEKARAVLAPVERRAASDAAASVALGIRYMRANAWTDAETWLRKALELEPG 1124

Query: 187  APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                   + Q     + +  A   L    + A E  R+   L +A   E  D+ +  A+ 
Sbjct: 1125 DVDAQFQLGQVLASLERYDEAFEMLKSAAEAAPE--RSDIGLRLAIQYEKLDRDEEAAA- 1181

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-------- 298
                + L     ++     A +    Q +  KA  I E+I  +    + A          
Sbjct: 1182 -AYEQLLSTSSPTVDTLARAGRFYARQGQTDKAGEIGERILAIK---DTAAAGHYLLGEG 1237

Query: 299  -YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +            +RA  +E+ + + +E     ++ A  M   D+A      A + AP
Sbjct: 1238 QFAQGEHAAARDSFRRAADIEQ-DPQYLE---ATARAAERMELYDEAFEAYSEASRRAP 1292



 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 81/275 (29%), Gaps = 39/275 (14%)

Query: 89  YTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYL--VYLLEVQIAL--AERQYNIAHEKL 143
             G  +        A +   + +       +  L   ++ + Q      + +   A  +L
Sbjct: 729 AQGAYAAIIDQGRDAERWRQAGLDYTRRIDDSSLGGAHVDKAQALKSIDQGRPAAAISRL 788

Query: 144 EMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVL 200
           + +L                  + R  D   A ++  K+L++SP  P      + +  + 
Sbjct: 789 QQVLSRTPNDPDAVLYQGWAHAAAR--DNTQAAQFFEKSLELSPKRPLPALYGLGRAQLA 846

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   A     Q  +      R   +  +  + + AD G         +E         
Sbjct: 847 QGDRDSARATFAQILE-----QRESHLGALVGAAQAADVGGSDKREAKLLE--------- 892

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
                  +   ++   R+    L + W +         Y  L S       +R  +    
Sbjct: 893 ----IVNRPDAAEGDPRE----LSRAWSL-------AAYISLDSGRIDEAGRRFEQAINA 937

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +  +V +LV  +++AL     + A  +    +   
Sbjct: 938 HPANVNALVGRARVALAQERYEDATEQLTRVIGTD 972


>gi|108762237|ref|YP_633061.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|14517942|gb|AAK64445.1|AF377339_6 serine/threonine kinase associate protein KapB [Myxococcus xanthus]
 gi|108466117|gb|ABF91302.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 271

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 18/249 (7%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  E    G L+ A +   KA+D+ P +    + +   Y   K +  A++      K 
Sbjct: 17  RGI--ELADRGWLDEAIKEFKKAIDLDPSSAHAHDNLATVYAEKKLFREALSEYLTALKL 74

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E       L    S    +      +  +  E+++L      A +    +   Q +  
Sbjct: 75  EPESATAHYNLACFLSTHAGEM-----AVEEYKEAIELDPEYPDAHLNLGLTYADQGRVE 129

Query: 278 KAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A   L+   +       P  E+A +       +    + +   +  +  ++ E+ + + 
Sbjct: 130 EAMRELQTAIELDSQDAFPRHELAALMMD--EGDYRSAITQLKEVVRLEPDNFEAQLDLG 187

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPD 391
               + G   +A      A  + P   +    L+ +        D + Y  Q +L A   
Sbjct: 188 ICFAQKGFYAEAERAYERARALNPEDLLLNYNLSALFALWGRPKDAVQY-LQKSLTADRP 246

Query: 392 PL--WISDD 398
            +  W+S D
Sbjct: 247 KVMGWLSTD 255


>gi|241759375|ref|ZP_04757480.1| N-acetylglucosaminyl transferase [Neisseria flavescens SK114]
 gi|261381361|ref|ZP_05985934.1| tetratricopeptide repeat protein [Neisseria subflava NJ9703]
 gi|241320320|gb|EER56639.1| N-acetylglucosaminyl transferase [Neisseria flavescens SK114]
 gi|284795678|gb|EFC51025.1| tetratricopeptide repeat protein [Neisseria subflava NJ9703]
          Length = 389

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 18/185 (9%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155
              AR++   + QQ   ++  L      ++     + + A      +L  P T    R  
Sbjct: 57  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVNEKRAR 113

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213
            ++ L       G ++ A++     L +     A    + ++  Y   ++W +AI     
Sbjct: 114 VLFELAQNYQSAGLVDRAEQIF---LGLQEGDMAREARQHLLSIYQQDRDWEKAIEMAQL 170

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSL 270
              + + +    A      +     K +  A+ +    A+E+ K C     A+I      
Sbjct: 171 LSHDEQTYQFEIAQFYCEIAQAALFKSNFDAARYNIGKALEANKKC---TRANIILGDIE 227

Query: 271 ISQNK 275
             Q  
Sbjct: 228 YRQGN 232


>gi|163796470|ref|ZP_02190430.1| TPR repeat [alpha proteobacterium BAL199]
 gi|159178320|gb|EDP62864.1| TPR repeat [alpha proteobacterium BAL199]
          Length = 595

 Score = 45.3 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 78/257 (30%), Gaps = 6/257 (2%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFES 164
           M       H   +  L  +L  +I    +++  A    E +      R  A + ++    
Sbjct: 300 MIFARLALHLQPDFDLAAMLIAEILDDRKRFEEALVLYEAVRPDSPYRLLARLRAVSTLE 359

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               D ++AQ     A D  P+ P     +       + W  AI          +     
Sbjct: 360 GLQRDDDAAQELIALAAD-RPELPDALIRLGDLERGRENWDAAIAAYGGALARMRPLEPR 418

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVIL 283
              +L  R +          +  D + +L+L  +          S + + +   +A+ ++
Sbjct: 419 HWSVLYTRGIALERAKRWEDAEPDFLRALELRPDQPYVLNYLGYSWVDRGEHLDRAKAMI 478

Query: 284 EKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           EK  ++ P       +  +      +  G +    R   +          +      +G 
Sbjct: 479 EKAVELRPQDGYIVDSLGWALYRLGDHAGAVGHLERAVALRPTDPTINDHLGDAYWRVGR 538

Query: 341 IDQAHAKAMLAMKIAPR 357
            ++A  +   A+   P 
Sbjct: 539 RNEARFQWQRALTFEPT 555


>gi|325110772|ref|YP_004271840.1| hypothetical protein Plabr_4245 [Planctomyces brasiliensis DSM
           5305]
 gi|324971040|gb|ADY61818.1| hypothetical protein Plabr_4245 [Planctomyces brasiliensis DSM
           5305]
          Length = 728

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 54/138 (39%), Gaps = 6/138 (4%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ +         +     ++L L       +   +  L +  K R++   +  +    P
Sbjct: 478 QARQAFYNEQFDQALSTTDQALALAPQDAAINEFRSLCLFALGKYRESSANIHAVLAAGP 537

Query: 292 HPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
             +   + ++Y++   +    +L++     + N ++ ++  +++   L MG  D A  + 
Sbjct: 538 GWDWTTLISLYSN--PDTYTEQLRKLEADVKANPDAADTRFLLAYHYLTMGHEDAAVEQW 595

Query: 349 MLAMKIAP-RKEIFLLLA 365
              +K+ P  K    LLA
Sbjct: 596 QDVVKLQPDDKLSAQLLA 613


>gi|237809864|ref|YP_002894304.1| HemY domain-containing protein [Tolumonas auensis DSM 9187]
 gi|237502125|gb|ACQ94718.1| HemY domain protein [Tolumonas auensis DSM 9187]
          Length = 389

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 51/389 (13%), Positives = 113/389 (29%), Gaps = 15/389 (3%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+RLI    +++  +     ++ +   V I   +     S      I + F F  +L   
Sbjct: 1   MIRLIVLLVILAAALLVGPQLADHQGYVMIAVADYTIEMSVITAAIIAFVFYFLLLLTEG 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +     S    +      R Y K  +    G+ ++A      A  +    + Q       
Sbjct: 61  LLSRLFSVRRGIRGWWQNRRYLKAQRQTQKGMTALAEGEYQRAEHLMLRSAGQSDL---P 117

Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           L+  L    A   +      ++   +     P  +     +        G+   ++    
Sbjct: 118 LLNYLSAAEAAHAQGAYQKRDEYLLKAGELDPQAQLAIQLTQVRLLQDQGEWQQSRELLE 177

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234
           +     P  P + + +   Y   + W   +  L     Q+  +  ++   +     A   
Sbjct: 178 QLRQRWPQHPQILQRLRSIYQAQQAWQEELELLPLLRKQQLLSDDDFAAAQQQCYQAWFS 237

Query: 235 ENADKGDMIASYHDAIES---LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +   + +         +    ++      +A I    +LI Q   + A   L  + +   
Sbjct: 238 KILQEQNEDVLLAFWQQQPRVVRHTPQLKLALI---DTLIQQQHYQAAFEQLAPLLRKQA 294

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +    L+  LR  + + +S   L  +  I         A      +
Sbjct: 295 DEALWQRCAELKLSDYSQLLQLLLRQLKQHPQSPALLSALGHIYYHQEQYVPAQGYLERS 354

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + + P       LA I +          Y
Sbjct: 355 VALQPTTRDQRALASIMEHQRLFEKAAEY 383


>gi|254250923|ref|ZP_04944241.1| hypothetical protein BDAG_00088 [Burkholderia dolosa AUO158]
 gi|124893532|gb|EAY67412.1| hypothetical protein BDAG_00088 [Burkholderia dolosa AUO158]
          Length = 839

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 82/273 (30%), Gaps = 21/273 (7%)

Query: 99  NIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           +   A    +   Q      +  L  +L  Q      +   A       L++      A 
Sbjct: 167 DAAAASYGKAIAFQPTYADAHSNLGNVLRAQ-----DRLADAIVHYRRALELNTELRAAH 221

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L       GD + A  +A     + PD      A+       +++  A     +  + 
Sbjct: 222 RGLAAALRATGDFDGALAHAR--AGLEPDDAPAHYALGLSLRGIQDFDGAARLFERACEI 279

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +    A L   R      +G+   S      +++L      A      +  + ++  
Sbjct: 280 DPGYAPAWARLGELR----CQQGEYEESVRLCRHAIELDPELADAYNFLGLAYHNLDRMA 335

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIV 331
            AE+       +NP     H  +A     L   ++ + + ++A  L     + ++  + +
Sbjct: 336 AAELSHRHAIDLNPDDADAHHNLAAALFRLDKLDDAMDEYRKAQEL---GVDPMKIRLTL 392

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
             I         A A    A+   P +    L+
Sbjct: 393 GDILWAKRDFAGAIAAFRDAVDHDPHRAYARLM 425


>gi|145502321|ref|XP_001437139.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404287|emb|CAK69742.1| unnamed protein product [Paramecium tetraurelia]
          Length = 816

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 16/119 (13%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAH-EKLEMMLQIPATREFA---------VYS 159
            ++   F  E L  LL  +    + Q      + +E +      R            V+ 
Sbjct: 699 SAKYKDFTKEELKMLLRQKKLEIKEQVESGEFKAIEHLQDNKDMRFLLTGFKKDFMEVFG 758

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-----YVLAKEWSRAITFLNQ 213
             F++   GD  +A+    +AL + P+    TEAV+       Y    +W        +
Sbjct: 759 KAFQAYLDGDWKTARAMFQEALKLKPNDG-PTEAVLHSMEETNYQKPSDWKGYRELTEK 816


>gi|295699207|ref|YP_003607100.1| cellulose synthase operon C domain protein [Burkholderia sp.
           CCGE1002]
 gi|295438420|gb|ADG17589.1| cellulose synthase operon C domain protein [Burkholderia sp.
           CCGE1002]
          Length = 1550

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 86/274 (31%), Gaps = 35/274 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G M +   +   A + +    ++   + + +  L+    A    + + A +    +    
Sbjct: 407 GEMLLQTGDPAGAEQAYRMALRRQADNPDAIRGLVGALAAQ--GRADEALQFANQLNAEQ 464

Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
             +      +      +        GDL +A+     AL   PD PW+   + + YV   
Sbjct: 465 QAKVGGIDRLRGEAQAAQARAAEARGDLGTARSLFEDALLNKPDDPWLRLDLARIYVRQG 524

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             + A + ++       +        L A +L +A+  D               D    A
Sbjct: 525 AVANARSMMDGLLATHPDMTD----ALYASALLSAETQDWSTGLAQL-------DRIAPA 573

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
                       ++  A   L+    V+   ++A       +  T   +      E +  
Sbjct: 574 ------------QRTDAMTTLQHRLWVHQQADLAT--RMAKNGQTQQAIATLRAAEPVAG 619

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + E + +++    + G   +A +    AM  AP
Sbjct: 620 NNPELIGVIASAYQQAGDPTRALSLVRAAMSAAP 653



 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 57/197 (28%), Gaps = 15/197 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GDL SA       L   PD P +  A+ + Y  A +   A+T      +   +      
Sbjct: 713 RGDLASAYEVIAPWLAAMPDNPDLQAALGRMYASAGDDRNALTSFRVALQRRPD----DL 768

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            LL A     A       +   A ++L L  N         +   +Q     A   L++ 
Sbjct: 769 SLLQAAISAAAGSKQFSYAETLANQALALAPNDPGVLATVGRMYRAQGNLSLASTYLQRS 828

Query: 287 WKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
                 P +AN   +                 A  L   N    E    ++  +      
Sbjct: 829 LVAANTPLVANAPRNAGSNVPRGWEAAMSQIGATPLPGTNP--FEGKTAIATSS----DA 882

Query: 342 DQAHAKAMLAMKIAPRK 358
           D A   A+  +   P  
Sbjct: 883 DNAARPALPFLNTQPSS 899


>gi|195352269|ref|XP_002042635.1| GM15004 [Drosophila sechellia]
 gi|194124519|gb|EDW46562.1| GM15004 [Drosophila sechellia]
          Length = 931

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 17/240 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDE--- 683

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     E++++  +     +   +    Q +   A        K  P   I       
Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPT-SIPLWILSA 740

Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358
             E   G L +A   LE     + +  V+  +     L  G  + A      A++  P  
Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNA 800



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|323306025|gb|EGA59759.1| Cdc27p [Saccharomyces cerevisiae FostersB]
          Length = 746

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 543 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPXHYNAYY 600

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 601 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 650

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 651 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 710

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 711 VGRKKDAIKELTVAMNLDP 729


>gi|262304971|gb|ACY45078.1| acetylglucosaminyl-transferase [Carcinoscorpius rotundicauda]
          Length = 290

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 73/184 (39%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N             A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALHLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G ++ A+     AL + P        +            A     +  +   
Sbjct: 26  LANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E+    A      +     +G +  +     E++++      A      +L      + A
Sbjct: 86  EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A+I  H  S N    +       ++  E  ++   ++
Sbjct: 142 LQCYTRAIQINPGFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 66/215 (30%), Gaps = 22/215 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q + A E     L +  T   ++ +L       G +  A R   KAL++ P+
Sbjct: 27  ANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  + +  +    A           + GD+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301
                ++++      A    A          +A        K+ P  P+    +A+    
Sbjct: 143 QCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTALKLKPEFPDAYCNLAH-CLQ 201

Query: 302 LLSE--NTVGKLKRA----------LRLEEINKES 324
           ++ +  +   ++K+            RL  ++   
Sbjct: 202 IVCDWTDYEARMKKLVSIVADQLEKNRLPSVHPHH 236


>gi|258541500|ref|YP_003186933.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256632578|dbj|BAH98553.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635635|dbj|BAI01604.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638690|dbj|BAI04652.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641744|dbj|BAI07699.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644799|dbj|BAI10747.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647854|dbj|BAI13795.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650907|dbj|BAI16841.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653898|dbj|BAI19825.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 620

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 96/298 (32%), Gaps = 11/298 (3%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             AR M  +         E  + L E+QI         A E L  + Q       A   L
Sbjct: 321 EAARLMLGFALAMDPTLAEARLMLAEIQIDEDHG--AAARETLLRVPQSDPMSPVARLRL 378

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                       A       +   PD   +  A+    V  K+W  AI    +    A  
Sbjct: 379 AVLDSTPDQATEAVSLLRPLVAQLPDQILLQRALGNALVQQKDWKGAIAAYTKAIDLASA 438

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKA 279
                  LL  R++   + GD   +  DA  +L    +  M       S++ ++    +A
Sbjct: 439 QKDVDWTLLFLRAMVYHEMGDWPHARDDARAALAYAPDESMLLNFLGYSMVERHENLAEA 498

Query: 280 EVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           E +L K  +++  P+ A I     +      +    L    +  E   E  E    + ++
Sbjct: 499 EKLLRKAHQLS--PDDAAITDSLGWVRAERGDLNEALDLLEKAAEKTPEDPEVNYHLGEV 556

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               G   +A  +  +A+ + P      L+ A +++A      K       A  A  D
Sbjct: 557 YWRQGRKTEAIDQWNVALGLHPIPSDEVLIRAALKRAGVEPDVKKADQAAPAKVAPQD 614


>gi|182412419|ref|YP_001817485.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177839633|gb|ACB73885.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 795

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 77/239 (32%), Gaps = 13/239 (5%)

Query: 127 VQI-ALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDIS 184
            Q  A    + + A    E  LQ+      A   L Y  +   G L  A  +   A+  S
Sbjct: 543 AQTLARMPGRRDDAIRHYETALQLRPDDVRAHNGLAYLLAQIPGRLPEAIAHGEAAVAAS 602

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMI 243
           P  P     +     +  E   A   + +  + A E     A      +       G   
Sbjct: 603 PRDPQAHYQLANALAVRPE--GAAEAI-RHYEIALELEPQLAPAHYGLANTLVHLPGRSA 659

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP-----HPEIAN 297
            +      +L L    + A I  A  L S   +R+ A    E   ++NP     H  +A 
Sbjct: 660 EAVTHYERALALDPGFLEAHINLANLLTSIEPRREEAIAHYEAALRLNPNLPWVHHNLAL 719

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +            ++       +N + ++++  +  +  + G   QA A    A++  P
Sbjct: 720 VLAQ-DPAQARAAMQHCEEALRLNPDYLDAMNSLGILYAQQGDTAQARAVWQRALQKDP 777



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 10/135 (7%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL-NSAQRYATKALDISPDAPWV 190
              +   A    E  L +      A  +L      I      A  +   AL ++P+ PWV
Sbjct: 654 LPGRSAEAVTHYERALALDPGFLEAHINLANLLTSIEPRREEAIAHYEAALRLNPNLPWV 713

Query: 191 TEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
              +    VLA++ ++A   +    +  +   ++      L I  + +    GD   +  
Sbjct: 714 HHNL--ALVLAQDPAQARAAMQHCEEALRLNPDYLDAMNSLGILYAQQ----GDTAQARA 767

Query: 248 DAIESLKLCDNSIMA 262
               +L+       A
Sbjct: 768 VWQRALQKDPAFAPA 782



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 54/200 (27%), Gaps = 15/200 (7%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +IA     +A       +     +               E     A    E+ L++    
Sbjct: 591 AIAHGEAAVAASPRDPQAHYQLAN---------ALAVRPEG-AAEAIRHYEIALELEPQL 640

Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFL 211
             A Y L      + G    A  +  +AL + P        +      +      AI   
Sbjct: 641 APAHYGLANTLVHLPGRSAEAVTHYERALALDPGFLEAHINLANLLTSIEPRREEAIAHY 700

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
               +           L +  +    D     A+     E+L+L  + + A         
Sbjct: 701 EAALRLNPNLPWVHHNLALVLA---QDPAQARAAMQHCEEALRLNPDYLDAMNSLGILYA 757

Query: 272 SQNKKRKAEVILEKIWKVNP 291
            Q    +A  + ++  + +P
Sbjct: 758 QQGDTAQARAVWQRALQKDP 777


>gi|307299888|ref|ZP_07579673.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
 gi|306904777|gb|EFN35360.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
          Length = 624

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 14/148 (9%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    +  L  + +     +  +  +++ L  +   A    A++  +Q K  +A    ++
Sbjct: 420 AEAHASLGLALSLRERHSEAMAEFDQAITLDPDLFEAHYFYARACFTQGKLDEAARHFQR 479

Query: 286 IWKVNPHPE-------IANIYTHLLSE---NTVGK--LKRALRLEEINKESVESLVIVSK 333
              +   P+       + N+   L  E   NT  +  + RA R   +  E+     + + 
Sbjct: 480 AADIK--PDDYQALLVLINVLRSLGREQEMNTAAREGVARAERELMMRPENPRPAYLGAV 537

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               +G +D+A   A  A+   P   + 
Sbjct: 538 GLAALGELDRAKEWAGRALATDPDDRLA 565


>gi|307247717|ref|ZP_07529755.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306855747|gb|EFM87912.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 391

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 84  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 144 SLTQLMTVYQKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 204 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIEKIKACY 259

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYPSMITF 318

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341


>gi|303252344|ref|ZP_07338510.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648803|gb|EFL78993.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 398

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 91  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 151 SLTQLMTVYQKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIEKIKACY 266

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYPSMITF 325

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348


>gi|262305035|gb|ACY45110.1| acetylglucosaminyl-transferase [Scutigerella sp. 'Scu3']
          Length = 290

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +          + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVAEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 15/174 (8%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
            GL++        A + ++   +    H + L  L    I   +     A     + +  
Sbjct: 33  KGLVA-------EAEECYNTALRLCPTHADSLNNL--ANIKREQGYTEEATRLYLKALEV 83

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            P     A  +L     + G LN A  +  +A+ I P        +       ++   A+
Sbjct: 84  FPEF-AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGAL 142

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               +  +    +    A      +  + D G++  +      +LKL  +   A
Sbjct: 143 QCYTRAIQINPAF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDA 192


>gi|260793009|ref|XP_002591506.1| hypothetical protein BRAFLDRAFT_105272 [Branchiostoma floridae]
 gi|229276712|gb|EEN47517.1| hypothetical protein BRAFLDRAFT_105272 [Branchiostoma floridae]
          Length = 1637

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 58/189 (30%), Gaps = 44/189 (23%)

Query: 134  RQYNIAHEKLEM---MLQIPATREFA-------VYSLYFESC--------RIGDLNSAQR 175
              Y+ A   +E    M    +T +         +                R GD   A  
Sbjct: 865  GDYHKAKSYIEQALQMCSSQSTIQAGNASLAIVLRDYMISQLITLADIWTRFGDNRKAIS 924

Query: 176  YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            YA KAL I   +         +  +    + ++  L    +N  ++ +    +  A  + 
Sbjct: 925  YAEKALQIFRSS-------YGECSVHHGIAGSLDILGTAWQNLGDYRKAAMYMEQALQMH 977

Query: 236  NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-------- 287
                G   A  + AI           + + A K ++     RKA+   E+          
Sbjct: 978  KDLYGQNGAHPNIAI-----------SLVNAGKVIVELGDLRKAKKYYEEALQMTRDFYG 1026

Query: 288  KVNPHPEIA 296
            +   HPEIA
Sbjct: 1027 QSAVHPEIA 1035


>gi|146329322|ref|YP_001209473.1| tetratricopeptide repeat protein [Dichelobacter nodosus VCS1703A]
 gi|146232792|gb|ABQ13770.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 381

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 107/350 (30%), Gaps = 36/350 (10%)

Query: 45  LSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGL---MSIAAHNIP 101
           L  L   L AW   + V          +   +      K  +A + GL   ++       
Sbjct: 5   LVTLLLPLAAWS-GWWV---------AMRKEVRDLRKSKSREAYFEGLSFLLNDQTGQAI 54

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAV 157
                 + + QQ   +   L  L   +      + + A    + +L  P      R+   
Sbjct: 55  DVFLSMAEIDQQTFDNQLTLGTLFRKR-----GELDRALHLHQQLLDYPNATPLQRQSVA 109

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y L  +  + G    A+       D       V   + + Y    +W  AI      + +
Sbjct: 110 YELAEDCIQAGMYEQAKHLLESLRDEHFRLKDVLNTLYRLYERTADWQGAIKARELWQNS 169

Query: 218 A-KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +  +  A      +     + +  A++   + +L++      A +  A+    Q + 
Sbjct: 170 GFGDCRQQIAHYYCEIAQRALAQNETQAAHAAVVSALQIDARCGRAYLMRAQLAEQQGEY 229

Query: 277 RKA----EVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             A    + I E+     P   P +   Y H+  E+          LE+   E     + 
Sbjct: 230 VSAIHSYQSIAEQALDFLPEILPFLMKAYQHIDREDEY-----LAWLEQKEAEQPFVRLT 284

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           ++ + +         A   L  K        LLLA   + +  +  + LY
Sbjct: 285 LALVHIL--EKRAPDAALQLLEKRLQTSANPLLLADYLRLHQSDDIRALY 332


>gi|150375980|ref|YP_001312576.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
           WSM419]
 gi|150030527|gb|ABR62643.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
           WSM419]
          Length = 643

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 208 ITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDNSI 260
              L++  +    +   RA L        +      A   D+     ++ ++++L  N  
Sbjct: 397 RALLHRALELDPGYAAARASLGMTYIVDFVQNLTGRATVTDVETGLSESRQAVRLDPNLA 456

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLKRA 314
           +     +  L +      A    ++  ++NP+ P+    +A       S +  V   +RA
Sbjct: 457 VGYQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERA 516

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            RL  +  E      +  +     G +D+A       +  APR+   LL+     +   +
Sbjct: 517 RRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPREPDCLLIQTAVLSQRGD 574

Query: 375 TDKILYWTQSALHAMPD 391
                        A P+
Sbjct: 575 AQGAQRTMARLTEADPE 591



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 17/155 (10%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266
            L  + +         A++     L  A + D   +   A   +    + +         
Sbjct: 376 VLQARNRYKHGSKDAEALIASRALLHRALELDPGYAAARASLGMTYIVDFVQNLTGRATV 435

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321
                  ++ R+A  +          P +A  Y  L      + +  G ++ A R  E+N
Sbjct: 436 TDVETGLSESRQAVRL---------DPNLAVGYQVLSFGLSATGDYPGAMQAAQRAVELN 486

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +SL+ ++K  +  GS D+A   A  A ++ P
Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 10/160 (6%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+ +    + +A+ + P+     + +        ++  A+    Q  + A E N N    
Sbjct: 437 DVETGLSESRQAVRLDPNLAVGYQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEKI 286
           L+A +      G    +  +A  + +L         +    ++L +  +  +A+ +L + 
Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLREC 551

Query: 287 WKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKE 323
               P  P+  +          +  G  +   RL E + E
Sbjct: 552 LIRAPREPDCLLIQTAVLSQRGDAQGAQRTMARLTEADPE 591



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 45/124 (36%), Gaps = 7/124 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD   A + A +A++++P+ P    A+ +  V    +  A+    + ++         
Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527

Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDN--SIMASICAAKSLISQNKKRKAEV 281
             +      +    D+ D +      I + +   +   I  ++ + +   +Q  +R    
Sbjct: 528 TYVYGQALYAAGRLDEADEVL-RECLIRAPR-EPDCLLIQTAVLSQRG-DAQGAQRTMAR 584

Query: 282 ILEK 285
           + E 
Sbjct: 585 LTEA 588


>gi|260433052|ref|ZP_05787023.1| putative TPR/sulfotransferase domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416880|gb|EEX10139.1| putative TPR/sulfotransferase domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 565

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 14/198 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G +  A  Y+ + LD  P    +   + +  +  + W   +    +K KN  +  + 
Sbjct: 100 MQTGQIAQALAYSERMLDKFPGNTEIIRVIDEIKLKGQNWRSIVENATEKLKNDPDNPK- 158

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              LL +R       G + AS  D   + +L  + +  +   A  L     K     IL 
Sbjct: 159 ---LLASRGRAYGKLGFVEASSRDIARAYELAPDDMGIAFRKAVDLHQAGDKTGCAEILW 215

Query: 285 KIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI-------A 335
           +I +  PH   A   + + +  E     L +         +  +S +  +K         
Sbjct: 216 RILEQEPHHISALYQLSSMVDREQATSLLPQVEA-AMAELDHKDSTLEFAKAQLESKIEG 274

Query: 336 LEMGSIDQAHAKAMLAMK 353
           LE      A A A    +
Sbjct: 275 LEAALPQFARANAAQHAE 292


>gi|195591395|ref|XP_002085426.1| GD14782 [Drosophila simulans]
 gi|194197435|gb|EDX11011.1| GD14782 [Drosophila simulans]
          Length = 931

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 17/240 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDE--- 683

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     E++++  +     +   +    Q +   A        K  P   I       
Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPT-SIPLWILSA 740

Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358
             E   G L +A   LE     + +  V+  +     L  G  + A      A++  P  
Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNA 800



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    ++ K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVVRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|126728310|ref|ZP_01744126.1| TPR domain protein [Sagittula stellata E-37]
 gi|126711275|gb|EBA10325.1| TPR domain protein [Sagittula stellata E-37]
          Length = 571

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 74/207 (35%), Gaps = 9/207 (4%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-AQRYATKALD 182
           LL   +     QY +A +  E +     +R  AV     E+ R  D  + A        +
Sbjct: 295 LLAGDLLSDMGQYELAEQVFEEVPTDDPSRHAAVLG-EAEALRDQDKTAQAIAVLETLAE 353

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             PD P V   +   +   + +  A+T   +     ++ +     L  AR++    +   
Sbjct: 354 QQPDLPVVHTTLGDIFRQEQRYEDAVTAYTKALSLYEQESERLWFLYYARAISYERQEKW 413

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKK-RKAEVILEKIWKVNPHPEI------ 295
             +  D  ++L L             SL+ Q++K  +A  ++E+     P+         
Sbjct: 414 EEAEADFRKALDLNPEQPQVLNYLGYSLVEQHRKLDEALNMIERAVAARPNSGYIVDSLG 473

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINK 322
             +Y     E  V  ++RA  L  I+ 
Sbjct: 474 WVLYRLGRYEEAVPHMERAAELMPIDP 500



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 10/160 (6%)

Query: 125 LEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L  + A     +  A    E  +   P   E    ++  E   +G+   A   A +  + 
Sbjct: 32  LAARQASFLGDFASAAHYYERALAFDPGRAELLERAILAE-MSLGNFGKAALLAERMAEA 90

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             ++     A +   V ++ ++  I  ++ K+      +       + ++      GDM 
Sbjct: 91  GNESQIAQMAALTTAVESESFANVIQSIDDKRGIGPLADG------LVKAWAQLGAGDMS 144

Query: 244 ASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVI 282
           A+  +  +++         AS   A +L S      A  I
Sbjct: 145 AALIE-FDNVAKMPGLGPFASYHKALALASVGDFESAAAI 183


>gi|194333717|ref|YP_002015577.1| Tetratricopeptide domain-containing protein [Prosthecochloris
           aestuarii DSM 271]
 gi|194311535|gb|ACF45930.1| Tetratricopeptide domain protein [Prosthecochloris aestuarii DSM
           271]
          Length = 1339

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 22/218 (10%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L        D   A+   +K            + ++    L  +  +A T L++  +  K
Sbjct: 621 LLDLKRLDPDNLQARTELSKIYQQQKKWKEAGDILLDLKRLDPDNLQARTELSKIYQQQK 680

Query: 220 EWNRNRAILLIARSLEN------ADKGDMIASYHDAIES-------LKLCDNSIMASICA 266
           +W     ILL  + L+        +   +        E+        +L  +++ A    
Sbjct: 681 KWKEAGDILLDLKRLDPDNLQARTELSKIYQQQKKWKEAGDILLDLKRLDPDNLQARTEL 740

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP---HP--EIANIYTHLLS-ENTVGKLKRALRLEEI 320
           +K    Q K ++AE IL +  K+ P   HP  E++ IY      +     L   L L+ +
Sbjct: 741 SKIYQQQKKWKEAEDILLEEIKIAPDALHPRTELSKIYQQQKKWKEAKDIL---LDLKRL 797

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           + +++++   +SKI  +     +A    +  +KIAP  
Sbjct: 798 DPDNLQARTELSKIYQQQKKWKEAEDILLEEIKIAPDA 835



 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 75/229 (32%), Gaps = 41/229 (17%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE---------------- 203
           L        D   A+   +K            + ++    L  +                
Sbjct: 689 LLDLKRLDPDNLQARTELSKIYQQQKKWKEAGDILLDLKRLDPDNLQARTELSKIYQQQK 748

Query: 204 -WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            W  A   L ++ K A +    R       S     +     +    ++  +L  +++ A
Sbjct: 749 KWKEAEDILLEEIKIAPDALHPR----TELSKIYQQQKKWKEAKDILLDLKRLDPDNLQA 804

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP---HP--EIANIYTHLLSENTVGKLKRALRL 317
               +K    Q K ++AE IL +  K+ P   HP  E++ IY          K K+A  +
Sbjct: 805 RTELSKIYQQQKKWKEAEDILLEEIKIAPDALHPRTELSKIYQQ------QKKWKKAEDI 858

Query: 318 ----EEINKESVESLVIVSKIALEMGSIDQAHAKAM-----LAMKIAPR 357
                +I  +++     +SKI  +     +A    +      A ++ PR
Sbjct: 859 LLEEIKIAPDALHPRTELSKIYQQQKKWKEAEDILLESLYIDAEQLHPR 907


>gi|71898475|ref|ZP_00680647.1| TPR repeat [Xylella fastidiosa Ann-1]
 gi|71731788|gb|EAO33847.1| TPR repeat [Xylella fastidiosa Ann-1]
          Length = 690

 Score = 45.3 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 77/228 (33%), Gaps = 14/228 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G L+ A++ +  A  I  D P +        +   +  +A+  L+Q  +   E   
Sbjct: 110 AIARGALDEAEQLSRTAARIISDHPQLLAVNATITLHRGQVDQALAMLSQAVELLPE--- 166

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               +L +       KG +  +       ++L  + I      A+    Q +   A  IL
Sbjct: 167 -EPAVLFSLGFAYLQKGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRIL 225

Query: 284 EKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           E+     P  +   ++       L++ N    L    ++     E   +L  +     ++
Sbjct: 226 EEA-LSLPEGDTPALHRLTGEFELMAGNPDRALPHLRQVLATWPEDPRTLEALLTAWKQL 284

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD---KILYWTQ 383
              D A      A+ I PR     L A++  A   + +    I  W  
Sbjct: 285 DMDDDARVTLDAALDIKPRNHDLWL-ARLSVAPVGSDEARIVIERWLS 331



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 34/301 (11%)

Query: 92  LMSIAA----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L+++ A    H   + + +            E  V        L +     A    + ++
Sbjct: 136 LLAVNATITLHRGQVDQALAMLSQAVELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVI 195

Query: 148 QIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWS 205
           ++       V +L  + + R G L+ A R   +AL +   D P +     +  ++A    
Sbjct: 196 ELNP-HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELMAGNPD 254

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           RA+  L Q      E  R    LL A    + D  D   +   A++      +       
Sbjct: 255 RALPHLRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKPRNHDL-----W 308

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KE 323
            A+  ++     +A +++E+             +   + E+          L  ++  + 
Sbjct: 309 LARLSVAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQN 351

Query: 324 SVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
           + E+   V++  +A+E G +          ++  P   +  L   IE    H    +  W
Sbjct: 352 NPEAAETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVACLQQLIESVPEHERTILRPW 411

Query: 382 T 382
            
Sbjct: 412 L 412


>gi|284051652|ref|ZP_06381862.1| peptidase S1 and S6 chymotrypsin/Hap [Arthrospira platensis str.
           Paraca]
          Length = 764

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 4/132 (3%)

Query: 161 YFESCRIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
             ++    D    A  Y  +A+ + P+  W    +        E   AIT   +  +   
Sbjct: 178 LGQALAQVDKAEEATGYYRRAIALEPEFFWSYLKLADVLKSMGETDEAITMYRRANQIDP 237

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E +      L    L   ++  +  +     +++++  +     +  A +L SQ   ++A
Sbjct: 238 EASAWSHYNL---GLALYEQNQIDEAISCYRQAIRVDPDFFWPHLKLADALSSQGHNQEA 294

Query: 280 EVILEKIWKVNP 291
             +  +  ++NP
Sbjct: 295 IAMYHRAIELNP 306



 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 4/166 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            YL    +  +  + + A        Q  P    ++ Y+L         ++ A     +A
Sbjct: 208 SYLKLADVLKSMGETDEAITMYRRANQIDPEASAWSHYNLGLALYEQNQIDEAISCYRQA 267

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + PD  W    +            AI   ++  +   +     A   +  +L    +G
Sbjct: 268 IRVDPDFFWPHLKLADALSSQGHNQEAIAMYHRAIELNPDVTPW-AYYNLGDALNT--EG 324

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +     ++L +      A +    +L   N+  +A  + +K 
Sbjct: 325 KYEEAITCYHQALNIDPQLFQAYVRLGDTLDQLNQHTEATDMYKKA 370


>gi|291614668|ref|YP_003524825.1| hypothetical protein Slit_2210 [Sideroxydans lithotrophicus ES-1]
 gi|291584780|gb|ADE12438.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
          Length = 736

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 7/191 (3%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A +   +AL I P       A             A++   +    A       A LL+
Sbjct: 49  EAALQALERALSIEPRHIQARCAKGAVLCDLGRSQEALSVYRKALHLAPA----DAQLLL 104

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---VILEKIW 287
              +     GD  A+      +L+       A +     LI   + + A      L  ++
Sbjct: 105 NMGIVLERMGDQNAALERYDLALRHHPEFASALLNRGSMLIRLGRLQDALDNNRRLVGLY 164

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
               H +     + +        L    R   +N  S ++          +   D+A  +
Sbjct: 165 PEWEHAQFNLGESLMALSRWEEGLAAYERAVALNPRSAKAHFSAGLALAMLKRFDRARQE 224

Query: 348 AMLAMKIAPRK 358
            +    I P  
Sbjct: 225 FLTTQVIDPAA 235


>gi|261365656|ref|ZP_05978539.1| tetratricopeptide repeat protein [Neisseria mucosa ATCC 25996]
 gi|288565819|gb|EFC87379.1| tetratricopeptide repeat protein [Neisseria mucosa ATCC 25996]
          Length = 389

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 106/352 (30%), Gaps = 59/352 (16%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              AR++   + QQ   ++  L      ++     + + A    + +L  P T       
Sbjct: 57  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQALLDSPDT------- 106

Query: 160 LYFESCRIGDLNSAQRY-----ATKALDISPDA------PWVTEAVVQQYVLAKEWSRAI 208
              E         AQ Y       +A  I              + ++  Y   ++W +AI
Sbjct: 107 -VNEKRARVLFELAQNYQSAGLVDRAEQIFIGLQEGNMAREARQHLLSIYQQDRDWEKAI 165

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASIC 265
                   + + +    A      +     K ++ A+      A+++ K C     A++ 
Sbjct: 166 ETAQLLSHDEQTYQFEIAQFYCELAQTALFKSNLDAARYNVQKALDANKKCAR---ANMI 222

Query: 266 AAKSLISQNKKRKAEV---ILEK---IWKVNPHPEIANIYTHL-LSENTVGKL----KRA 314
                  Q     A      +E+    +      ++   Y      E  + +L    +  
Sbjct: 223 LGDIETKQGNFPAAVEAYGAIEQQNHAYLSMVGEKLYEAYAAQDKQEEGLNRLIGYMQTF 282

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQ 369
             L+ IN        ++ + AL +    +A   A+  ++  P    ++ LL    + +  
Sbjct: 283 PDLDLIN--------VIYEKALLLKGESEAAQLAVELVRQKPDLNGVYRLLGLKISDMNP 334

Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
           A   + D +       L      ++   + +  S    W    P       F
Sbjct: 335 AWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWETF 382


>gi|223939204|ref|ZP_03631086.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223892157|gb|EEF58636.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 321

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 78/225 (34%), Gaps = 15/225 (6%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQY 198
            +        P T    +  +Y  + ++  +L+ A     + +   PD P +  ++    
Sbjct: 91  EKAYVTSKHDPRT---GM--MYALALKMNKELSKAYSVDKEMVAEHPDIPQLQFSLATLE 145

Query: 199 VLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           +  +++  A+  L     K  A    +++  +     L     G    +      +    
Sbjct: 146 MTIQKYDEAVAILEPLWAKAPANLPEKDKGTINFMLGLCYLYNGQHAKAISSLENANSHF 205

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKR 313
            N+ M      ++ +   +  KA+  LEK   +NP    A  Y  +    S ++    K 
Sbjct: 206 PNAGMIYNVLGEAYLKGGEPDKAKDFLEKALAINPKLPSALYYRGICLERSGDSEHANKC 265

Query: 314 ALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                   K    ++ E   +++++  ++   ++A      A ++
Sbjct: 266 FQECYRFGKDWLRDNGEDYYLMAQVCSKISKQEEADDYRKQASQL 310


>gi|302039657|ref|YP_003799979.1| hypothetical protein NIDE4395 [Candidatus Nitrospira defluvii]
 gi|300607721|emb|CBK44054.1| protein of unknown function, TPR-like [Candidatus Nitrospira
           defluvii]
          Length = 345

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 6/204 (2%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL    +      + M SY             +    QI        +A ++    +
Sbjct: 94  LVQGLFLAQSGQSE--QSMASYKEAAKLAPQSAYPHYFLAQIHERADHLEMAIKEYREAV 151

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           ++      A  +L       G L  A     + + ++P+       +        ++  A
Sbjct: 152 KLAPAFAPARTNLGVAYQEQGRLEMAIPQYREVIKLNPNDALAHANLGCALAEQGKFEPA 211

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +    Q  K A   N + + +  A       KG M  +  +  E+ +L      A     
Sbjct: 212 L----QAYKEALRLNPSDSEIHFALGGVYETKGRMDLALREYREATQLNPEFASAHTALG 267

Query: 268 KSLISQNKKRKAEVILEKIWKVNP 291
             L+ Q++  +A     K  K NP
Sbjct: 268 WLLMEQSRASEAMESFSKAVKANP 291



 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 89/297 (29%), Gaps = 24/297 (8%)

Query: 98  HNIPLARKMHSYVSQQ---------------HTFHNEYLVYLLEVQIALAERQYNIAHEK 142
                A +MH+   Q+                        +L++        Q   +   
Sbjct: 53  GEFADAWRMHARALQETDDIERVREWVHSIVDRHAGNAQTHLVQGLFLAQSGQSEQSMAS 112

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            +   ++     +  Y L     R   L  A +   +A+ ++P        +   Y    
Sbjct: 113 YKEAAKLAPQSAYPHYFLAQIHERADHLEMAIKEYREAVKLAPAFAPARTNLGVAYQEQG 172

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               AI     + +   + N N A+         A++G    +     E+L+L  +    
Sbjct: 173 RLEMAI----PQYREVIKLNPNDALAHANLGCALAEQGKFEPALQAYKEALRLNPSDSEI 228

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEE 319
                    ++ +   A     +  ++NP    A+    +  +        ++   +  +
Sbjct: 229 HFALGGVYETKGRMDLALREYREATQLNPEFASAHTALGWLLMEQSRASEAMESFSKAVK 288

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLA--MKIAPRKEIFLLLAQIEQANSHN 374
            N E  ++L  + +I    G  + A      A   +  P K+  ++ A      + +
Sbjct: 289 ANPEEAQALYGIGRIYAAKGKRESAAENFSKAIRFEKDPTKKNAIMNALFASGQTGD 345


>gi|262305011|gb|ACY45098.1| acetylglucosaminyl-transferase [Hexagenia limbata]
          Length = 287

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +    H + L  L    I   +     A       L +      A 
Sbjct: 34  GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  + H    +LKL  +   A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIHSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIHSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|291613072|ref|YP_003523229.1| methyltransferase type 12 [Sideroxydans lithotrophicus ES-1]
 gi|291583184|gb|ADE10842.1| Methyltransferase type 12 [Sideroxydans lithotrophicus ES-1]
          Length = 931

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 42/123 (34%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL+        +   A +  + +L++      A ++L   S ++G   +   Y   AL+ 
Sbjct: 19  LLQAVELHQAGRLQEAEQCYQAILKLDPHHAKANHNLGVLSVQMGQSEAGLAYFAAALEA 78

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P       + +    LA +   A   L   +++  + +   A+         +  G   
Sbjct: 79  DPAHGQYWLSYIDTLHLAGQSEEARQVLALARQSGLQGDDVDALEASLEGAGLSGAGHQP 138

Query: 244 ASY 246
            S 
Sbjct: 139 ESA 141


>gi|163794023|ref|ZP_02187996.1| TPR repeat [alpha proteobacterium BAL199]
 gi|159180637|gb|EDP65156.1| TPR repeat [alpha proteobacterium BAL199]
          Length = 619

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 83/266 (31%), Gaps = 47/266 (17%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-------------- 176
           LA  +   A    E +L+   T   A+  L   + R G+++ A                 
Sbjct: 14  LAAGRVTEAKAIFENLLRAEPTHVRALCGLGTIALRGGEVSRALELIGHAVAIAPTDGMT 73

Query: 177 --------------------ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                                 +ALD+ P  P +        +   +         + ++
Sbjct: 74  VGNLGVVYLAQNKLIEAEDCFRRALDLEPSQPELHANFASTLLARGD----RETALKAQR 129

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A +   + A             G           +L++  N + A    +       + 
Sbjct: 130 RAVDLASDSAAQRFNLGNVLVAVGRSAEGAEAYESALEIEPNHVGALNNLSILHKKAGRL 189

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLL-----SENTVGKLKRALRLEEINKESVESLVI 330
             A+ +L++    +P +PE+   +  +L      +  +  ++RA         +    + 
Sbjct: 190 DAAQALLDEAQLHDPMNPELMANHADILLQRGHCDQALEIMRRA---AGQAPGNPALQLS 246

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  + +E+G + +A  +   A + AP
Sbjct: 247 LGTMLMELGRLTEAGQELANATRKAP 272



 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 12/185 (6%)

Query: 95  IAAHNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           +A  +   A K        +         L  +L         +     E  E  L+I  
Sbjct: 116 LARGDRETALKAQRRAVDLASDSAAQRFNLGNVLVA-----VGRSAEGAEAYESALEIEP 170

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+ +L     + G L++AQ    +A    P  P +        +      +A+  +
Sbjct: 171 NHVGALNNLSILHKKAGRLDAAQALLDEAQLHDPMNPELMANHADILLQRGHCDQALEIM 230

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +    A         L ++      + G +  +  +   + +    S   ++   + L 
Sbjct: 231 RRAAGQAP----GNPALQLSLGTMLMELGRLTEAGQELANATRKAPESPDIALALGRLLR 286

Query: 272 SQNKK 276
            QN+ 
Sbjct: 287 RQNQL 291



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 81/281 (28%), Gaps = 18/281 (6%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIA---LAERQYNIAHE 141
           A   G+       + LA+          +     E     L    A   LA      A +
Sbjct: 67  APTDGMTVGNLGVVYLAQNKLIEAEDCFRRALDLEPSQPELHANFASTLLARGDRETALK 126

Query: 142 KLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
                  +    A + F + ++     R  +   A      AL+I P+       +   +
Sbjct: 127 AQRRAVDLASDSAAQRFNLGNVLVAVGRSAEGAEAY---ESALEIEPNHVGALNNLSILH 183

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             A     A   L++ + +          L+   +     +G    +      +      
Sbjct: 184 KKAGRLDAAQALLDEAQLHDP----MNPELMANHADILLQRGHCDQALEIMRRAAGQAPG 239

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHL--LSENTVGKLKRAL 315
           +    +     L+   +  +A   L    +  P  P+IA     L             A 
Sbjct: 240 NPALQLSLGTMLMELGRLTEAGQELANATRKAPESPDIALALGRLLRRQNQLDAAQAAAD 299

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           R   ++ +   + V+ +++ L  G  + A  K      ++P
Sbjct: 300 RAVNLSVKPGAAGVLATELLLMRGRYEAAWDKLDALASLSP 340


>gi|115379756|ref|ZP_01466830.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363243|gb|EAU62404.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
          Length = 350

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 90/270 (33%), Gaps = 37/270 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +        + + A+    K L + P+ P     + +     ++   A+  L    KN +
Sbjct: 1   MARLHLAQQEADKARPLLEKLLALDPEHPEARGFLARLKAEGEKDEGALDELRALAKNPE 60

Query: 220 E-----WNRNRAILLI-------ARSLENADKGDMI---------------ASYHDAIES 252
                 +N   A+LL+       A++   A K                        A++ 
Sbjct: 61  AGFIEFYNLGHALLLLPGKEAEAAQAFVQALKVAPKNPHATTYLGVAVWKQGQLPQALKC 120

Query: 253 LKLCDNSIM----ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSE 305
            K               A+K L+   +  KA++ L+K  +  P  PE+   +    + + 
Sbjct: 121 FKYAATLAPRESLPLQLASKVLVQLGQVGKAQLALQKALQRAPQKPELHEDFIKLCIFAN 180

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLL 363
                LK  +   +++ ++     +   + L  G++ +A      A+ +AP+       L
Sbjct: 181 KPKLALKSVIDFRQLDPKNPNGPYLQGLVMLLSGNLSEARRTFREAVALAPQAWEPKLGL 240

Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392
              +         + L   + A+  A  +P
Sbjct: 241 ARALLIGEQKEVAEALKLLEEAVALAPTEP 270


>gi|288962803|ref|YP_003453097.1| TPR repeat-containing protein [Azospirillum sp. B510]
 gi|288915069|dbj|BAI76553.1| TPR repeat-containing protein [Azospirillum sp. B510]
          Length = 571

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 16/254 (6%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIG 168
             H   +  L +LL   IA +   +N A    + +   P  R  A      E+    R+ 
Sbjct: 298 ALHLRDDLALAHLLIGDIAASRGHHNEALATFKRLETDPLLRWTAR---MREADSLVRLD 354

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             + A           P+       +   Y  AK ++ AI       +           L
Sbjct: 355 RDDDAIAILKDLAAERPERTDAIIRLGDIYRYAKRYAEAIPAYGTALERIGTPQERHWPL 414

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVILEKIW 287
           L AR++     G    +  D   +L L  +          S I + +   KA  ++E+  
Sbjct: 415 LYARAMCYERTGQWPQAEADLQRALTLRPDEPSLLNFLGYSWIDRGEHLDKARAMVERAV 474

Query: 288 KVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           ++ P            +Y     +  V KL+RA    E+          +       G  
Sbjct: 475 ELRPRDGYIVDSLGWALYKLGDYDAAVAKLERA---VELKPGDPTINDHLGDAYWRAGRR 531

Query: 342 DQAHAKAMLAMKIA 355
           ++A  +   A++ A
Sbjct: 532 NEARFQWTRALRNA 545


>gi|262305019|gb|ACY45102.1| acetylglucosaminyl-transferase [Periplaneta americana]
          Length = 288

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|223936382|ref|ZP_03628294.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223894900|gb|EEF61349.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 614

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 24/211 (11%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y E+ R  D   A           P+ P +  A+ Q  +  ++ S A   L    +    
Sbjct: 410 YLEASRYED---ALPIFEGLFRSFPERPELGHALFQCQLTLRKLSEATETLEVVLEGLPA 466

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK----- 275
              +    L+ R+     KG +  +     E+ +L      A       L+   +     
Sbjct: 467 GIWS----LLPRAELCLAKGQIQEARALVNEARQLHPTHPDALRRLGLLLLRLREWNALE 522

Query: 276 --KRKAEVILEK---IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              R+A  + +     W              L  +      + AL+  ++N    E+  +
Sbjct: 523 DLARQALKLDDNDALAWA-------GLAEAQLRKQLAAEATESALKAIQLNYYLSEAHFV 575

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +++  +  G   QA     + +++ P     
Sbjct: 576 LARALVAKGKWAQARDAMQVLLQLQPNNRAA 606


>gi|218782177|ref|YP_002433495.1| hypothetical protein Dalk_4348 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763561|gb|ACL06027.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 443

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 82/221 (37%), Gaps = 13/221 (5%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             D+  A R   +AL +   A  V  ++   + +  ++ +A+   +   +     + +  
Sbjct: 202 DNDVQGAIREYERALLVDSGAVNVHNSLGVCFAVLGDYPKALDRFDMASQ----LDPSEI 257

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + +    + +   G+   +    +++ ++  +     +   K  +S+ +  KA   L K 
Sbjct: 258 MPVYNTGVSHLMMGNRDKALELFLQAGEIEPDLFELLLETGKIYLSKGRTDKALDYLNKA 317

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
              N      H  + + Y  +   N     K      + N E  ESL  ++    ++G  
Sbjct: 318 VASNQDAWTGHKYLGDCYMEM--GNPSEAAKAYANAVKCNPEEAESLSSLAVAYDQIGEN 375

Query: 342 DQ-AHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380
            + A + A  +++IAP   +    +A I +        + +
Sbjct: 376 PEIALSFATQSIEIAPENALCQYRMASILEKRGELHKAVRH 416



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 4/124 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A ++ +M  Q+  +    VY+       +G+ + A     +A +I PD   +   
Sbjct: 237 GDYPKALDRFDMASQLDPSEIMPVYNTGVSHLMMGNRDKALELFLQAGEIEPDLFELLLE 296

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             + Y+      +A+ +LN+   + ++       L         + G+   +      ++
Sbjct: 297 TGKIYLSKGRTDKALDYLNKAVASNQDAWTGHKYLGDCY----MEMGNPSEAAKAYANAV 352

Query: 254 KLCD 257
           K   
Sbjct: 353 KCNP 356


>gi|158522425|ref|YP_001530295.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511251|gb|ABW68218.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 589

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 7/175 (4%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFES 164
           ++ + +  H  + + +  L      L + + + A       +   P        +L    
Sbjct: 414 LYRHAAALHPGNIQAVTNL--ADTLLEKGRIDEAIAFYRQALSMDPENALV-HNNLGAAF 470

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GD   A     +AL   P  P     +    V       AI    +       +   
Sbjct: 471 LKAGDRQRAAAGFRQALKYDPGHPMAGNNLGNLLVEMGRTDEAIACFEKTLTPDNPFLYK 530

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                   +   A KG+   +     ++L +  +   A     + L+ Q +   A
Sbjct: 531 ---AHNNIATAFARKGEFDKAVFHLRQALAIQPDYATARENLVRLLMMQQQGAAA 582



 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 44/173 (25%), Gaps = 12/173 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             A  + P        +    +       AI F  Q      E     A++         
Sbjct: 416 RHAAALHPGNIQAVTNLADTLLEKGRIDEAIAFYRQALSMDPE----NALVHNNLGAAFL 471

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNP 291
             GD   +     ++LK      MA       L+   +  +A    EK       +    
Sbjct: 472 KAGDRQRAAAGFRQALKYDPGHPMAGNNLGNLLVEMGRTDEAIACFEKTLTPDNPFLYKA 531

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           H  IA  +     E           L  I  +   +   + ++ +       A
Sbjct: 532 HNNIATAFAR-KGEFDKAVFHLRQALA-IQPDYATARENLVRLLMMQQQGAAA 582


>gi|21229212|ref|NP_635134.1| hypothetical protein MM_3110 [Methanosarcina mazei Go1]
 gi|20907782|gb|AAM32806.1| hypothetical protein MM_3110 [Methanosarcina mazei Go1]
          Length = 393

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 30/159 (18%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            ++ L E +   + E L+   + P T        L     R+G+   A +   KAL+I P
Sbjct: 249 ARVRLCEERLRESEEALKKNPEDPDTLFKIGKIHL-----RLGEQEKAIQAFKKALEIKP 303

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +     +   +    A     A+    +  +   ++           +    +KG+    
Sbjct: 304 ENAEAWQFRGKVLFKAGSEKEALHAFEKATRLKPDY-----------AEAWFEKGNAFLK 352

Query: 246 YHD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +   A  + K           AA+   S+  K KAE 
Sbjct: 353 LENLKGAENAFK----------IAARLWDSKGIKSKAES 381



 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 29/265 (10%), Positives = 80/265 (30%), Gaps = 26/265 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               AR+           ++E +           + +  +A E  + +L+       A++
Sbjct: 122 ESAGARERRHGNEGTKALYDEGVTL-------YRQGRLKLALEAFDSVLEANPLDFAALF 174

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-- 216
                  ++     A     +A +I+ +   +   +   +   + +  ++    +     
Sbjct: 175 HKGNALLKLKRYEEALEVFERASEINQENAGLWTNLGFIFTKLERFRDSLEAFEKSISLN 234

Query: 217 --NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                 W    A++   R  E            ++ E+LK             K  +   
Sbjct: 235 PVQKNAWEGRDAVIARVRLCE--------ERLRESEEALKKNPEDPDTLFKIGKIHLRLG 286

Query: 275 KKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLV 329
           ++ KA    +K  ++   PE A  +         + +    L    +   +  +  E+  
Sbjct: 287 EQEKAIQAFKKALEIK--PENAEAWQFRGKVLFKAGSEKEALHAFEKATRLKPDYAEAWF 344

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKI 354
                 L++ ++  A     +A ++
Sbjct: 345 EKGNAFLKLENLKGAENAFKIAARL 369


>gi|86137175|ref|ZP_01055753.1| TPR repeat protein [Roseobacter sp. MED193]
 gi|85826499|gb|EAQ46696.1| TPR repeat protein [Roseobacter sp. MED193]
          Length = 741

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 21/294 (7%)

Query: 71  MLFHMLHKRNYDKGYKA--LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
            +         +K   A  +Y  +++    N      ++S         N       ++ 
Sbjct: 6   SMTKANRLERKNKQEDAAKIYRDILAKFPKNTRAQAALNSLQKNMQRELNPPQELQQKLA 65

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A     +         +L       F   +L     +  +L+ A     KA +++P  P
Sbjct: 66  AAFDAGDHAKVASACASLLNSYRRSCFLWNTLGQCHLKSQNLDEAATCLNKACELNPKDP 125

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +  ++   +    +   A+    +    +    +    +      L    + + +    
Sbjct: 126 AIFSSLGDVHRAQGQIDNALALYKKALSLDGDTLSALNNMANTLTDLGRLAEAEPLLER- 184

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----- 302
               + KL   S +     +  L+   +  +A+  LE+  ++   PE++    +L     
Sbjct: 185 ----ACKLAPKSAVILFNYSNVLLRTGRVEQAKTFLEQATELA--PELSGAQYNLAQLQS 238

Query: 303 LSENTVGKLKRALRLEEINKESVESLV--IVSKIALE----MGSIDQAHAKAML 350
           L  +    +KR   + E       +    +  +  L     M    Q   +  L
Sbjct: 239 LDGDKEAAIKRFEHILETTPSDDRTRADKLHVQAHLNDWSWMEEYQQFRRQLGL 292


>gi|310819983|ref|YP_003952341.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309393055|gb|ADO70514.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1199

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 9/225 (4%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQ--KKKNAKEWNRNRAI 227
             A    T A  +SP+ P     + +    L ++ S A+  +    K K+  +  R+R  
Sbjct: 620 EKALNMYTNARKLSPEHPLARIGMAESQLALDQDLSLALADMEALGKSKDLVDPLRSRQQ 679

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+  R L    + D   +         L  +  +A   A +   +  K  +A+   E   
Sbjct: 680 LIQGRLLTELGRYDEALALLAQGVKGPLAFDFHLALGDAGR---AAGKLEEAQQAYEAAL 736

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           K+ P  E A      L    + + +    L  ++ E  +  ++ +   +      +A A+
Sbjct: 737 KLQPRSEDA---REGLGRTLLDRDRVKEVLARLDGEGRKVALVRAAAHVRQEDWKRARAE 793

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
                         +    +      N D+     + A++ +  P
Sbjct: 794 LEKTRVNNRYPLEAVGYLALADTMEGNGDQAREILEKAVNGVKKP 838


>gi|284051341|ref|ZP_06381551.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca]
 gi|291568213|dbj|BAI90485.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1104

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 89/253 (35%), Gaps = 15/253 (5%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDL 170
            +   +   L    + ++ L++ +        + +L++       VY +   +    G +
Sbjct: 291 AEKPINPRVLSLQKQAELYLSQGKLEETVATCQEILKLDP-NFLLVYVVLGNALHFQGKI 349

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           +SA R   +AL+I+P+   V   +   Y+   + + AI    +  +   +     A +  
Sbjct: 350 SSAIRAYNQALEINPNFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDL----AAVHW 405

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMA-------SICAAKSLISQNKKRKAEVIL 283
                    G+  A+ +    +L+L  + + A       +I A +    Q        I 
Sbjct: 406 NLGRVYQQLGNTEAAINSWKIALELKPDLVEAEFNFEFGNILARRGEYEQAIASYQRAIS 465

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            K     P+  I      +  +     L++  +   +N +  E  +  ++I  +M     
Sbjct: 466 RKPNWAEPYANIG--CLRVQQDRLEEALEQLQKAISLNPKMPEMYLHTARIFTKMRRHQD 523

Query: 344 AHAKAMLAMKIAP 356
           A       +++ P
Sbjct: 524 AINHYQKVIELKP 536



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 74/237 (31%), Gaps = 16/237 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREF 155
                A   +     +     E    +  L VQ    E       + + +  ++P     
Sbjct: 451 GEYEQAIASYQRAISRKPNWAEPYANIGCLRVQQDRLEEALEQLQKAISLNPKMPEMYLH 510

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               ++ +  R  D   A  +  K +++ P+ P     +        +   AI    +  
Sbjct: 511 TAR-IFTKMRRHQD---AINHYQKVIELKPNFPDAYANLANMQATIGQLPEAIANYQKTL 566

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +   EW      L          + +   +  +  ++L+L  +   A       L     
Sbjct: 567 QLKPEWAEVYCRLA-----HIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 621

Query: 276 KRKAEVILEKIWKV--NPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
             KA  + ++ W+      P    IA I+++  S      L +   L +I   S+E+
Sbjct: 622 LGKARKVADRYWENCGKTLPVLCAIAYIFSYTQSGACEQALAKLEELIKICNNSIET 678



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 12/193 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G+   A     +A+   P+       +    V       A+  L +            
Sbjct: 449 RRGEYEQAIASYQRAISRKPNWAEPYANIGCLRVQQDRLEEALEQLQKAISLNP--KMPE 506

Query: 226 AILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             L  AR      +  D I  Y   IE   L  N   A    A    +  +  +A    +
Sbjct: 507 MYLHTARIFTKMRRHQDAINHYQKVIE---LKPNFPDAYANLANMQATIGQLPEAIANYQ 563

Query: 285 KIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           K  ++   PE A +Y  L      +     +    +  E+  +  E+   +  +     +
Sbjct: 564 KTLQLK--PEWAEVYCRLAHIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 621

Query: 341 IDQAHAKAMLAMK 353
           + +A   A    +
Sbjct: 622 LGKARKVADRYWE 634


>gi|46581674|ref|YP_012482.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601167|ref|YP_965567.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
 gi|46451097|gb|AAS97742.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120561396|gb|ABM27140.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
 gi|311235314|gb|ADP88168.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           vulgaris RCH1]
          Length = 207

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 4/117 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL    RY  +A    P  P     +   ++   E  +AI  L +  K   ++ + 
Sbjct: 71  LQRGDLEGCLRYNEEAAQSRPKFPVAWSNIGFVHLQRGEPEKAIAALKKALKWQPDFIQA 130

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            A +  A  +E    GD  A  + + E++K   +   A    A +        K+  
Sbjct: 131 MATMGAAFYME----GDYEACINISNEAIKKEPSFGPAYNNLALAYFELGDFAKSVK 183



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 11/149 (7%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   S R  D  +A+     A+  SP        +    +   +    + +  +  ++ 
Sbjct: 33  GLALLSKR--DFVAAEESFLNAVRNSPRLAEAYVQLGGICLQRGDLEGCLRYNEEAAQSR 90

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            ++     +        +  +G+   +     ++LK   + I A      +   +     
Sbjct: 91  PKFP----VAWSNIGFVHLQRGEPEKAIAALKKALKWQPDFIQAMATMGAAFYMEGDYEA 146

Query: 279 AEVILEKIWKVNPH--PE---IANIYTHL 302
              I  +  K  P   P    +A  Y  L
Sbjct: 147 CINISNEAIKKEPSFGPAYNNLALAYFEL 175


>gi|15838760|ref|NP_299448.1| hypothetical protein XF2169 [Xylella fastidiosa 9a5c]
 gi|9107306|gb|AAF84968.1|AE004030_14 hypothetical protein XF_2169 [Xylella fastidiosa 9a5c]
          Length = 698

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 99/319 (31%), Gaps = 30/319 (9%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA---------------LA 132
           L     + A      A++  +   QQ+  H   L                        LA
Sbjct: 28  LARAWCASAPGEAQ-AQRWLAAALQQYGEHKAALTASEAALALAPERPELHLQHGLLLLA 86

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +   + A   L    ++   +          +   G L+ A++ +  A  I  D P +  
Sbjct: 87  QHDLSGADAALSRSTRLDPNQFNTYVMQAHLAIARGALDEAEQLSRTATRIISDHPQLLA 146

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                 +   +  +A+T L+Q  +   E       +L +       KG +  +       
Sbjct: 147 VNATIALRRGQVDQALTMLSQAVELLPE----EPAVLFSLGFAYLQKGHIAFAERAFQRV 202

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-----HLLSENT 307
           ++L  + I      A+    Q +   A  ILE+     P  +   ++       LL+ + 
Sbjct: 203 IELNPHVIPVRALIAQLAQRQGRLDDALRILEEA-LSLPEGDTPALHRLTGEFELLAGHP 261

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              L    ++     E   +L  +     ++   D A      A+ I PR     L A++
Sbjct: 262 DRALTHLRQVLATWPEDPRTLEALLTAWKQLDMDDDARITLDAALDIKPRNHDLWL-ARL 320

Query: 368 EQANSHNTD---KILYWTQ 383
             A   + +    I  W  
Sbjct: 321 AVAPVGSDEARIVIERWLS 339



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 99/296 (33%), Gaps = 32/296 (10%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++    +  A  M S          E  V        L +     A    + ++++   
Sbjct: 151 IALRRGQVDQALTMLSQAV--ELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVIELNP- 207

Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITF 210
               V +L  + + R G L+ A R   +AL +   D P +     +  +LA    RA+T 
Sbjct: 208 HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELLAGHPDRALTH 267

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L Q      E  R    LL A    + D  D   +   A++      +        A+  
Sbjct: 268 LRQVLATWPEDPRTLEALLTAWKQLDMDD-DARITLDAALDIKPRNHDL-----WLARLA 321

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESL 328
           ++     +A +++E+             +   + E+          L  ++  + + E+ 
Sbjct: 322 VAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQNNPEAA 364

Query: 329 VIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++  +A+E G +          ++  P   +  L   IE    H    +  W 
Sbjct: 365 ETVARQIVAIEPGRLSGEQRIVEALLQRDPPTAVACLQQLIESVPEHERTILRPWL 420



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 69/235 (29%), Gaps = 11/235 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++        A   A      +P        +        E   A+T        A E 
Sbjct: 14  IDALHRQAHAEALSLARAWCASAPGEAQAQRWLAAALQQYGEHKAALTASEAALALAPER 73

Query: 222 -NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              +    L+  +  +    D   S      S +L  N     +  A   I++    +AE
Sbjct: 74  PELHLQHGLLLLAQHDLSGADAALSR-----STRLDPNQFNTYVMQAHLAIARGALDEAE 128

Query: 281 VILEKIWK-VNPHPEIAN--IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            +     + ++ HP++        L        L    +  E+  E    L  +    L+
Sbjct: 129 QLSRTATRIISDHPQLLAVNATIALRRGQVDQALTMLSQAVELLPEEPAVLFSLGFAYLQ 188

Query: 338 MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            G I  A       +++ P    +  L+AQ+ Q      D +    + AL     
Sbjct: 189 KGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRI-LEEALSLPEG 242


>gi|295398572|ref|ZP_06808604.1| tetratricopeptide repeat family protein [Aerococcus viridans ATCC
           11563]
 gi|294973173|gb|EFG48968.1| tetratricopeptide repeat family protein [Aerococcus viridans ATCC
           11563]
          Length = 434

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 52/246 (21%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             LL+           +A  KL    ++   +   +Y +     + G+   A     + L
Sbjct: 109 ALLLQADAYQMYNLPEVALVKLSEARELAPNQPVILYGIAELRFQQGEFQQALPLYERLL 168

Query: 182 DISPDAPWVTEAVVQ--------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                +    E++ +              ++  AI  +    +N +   +   +      
Sbjct: 169 ----QSEETPESLFETIEAHFAYAKAATGDFEEAIELIEATPENDRTDEQQEQLAFYYVE 224

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
            EN +K + I       E  KL D  +      A+   + +    A  +++K   VNP  
Sbjct: 225 TENFEKANTI--LEALYEDDKLSDGLL---AVFAQVKNAFHDHDGALEMIDKAILVNP-- 277

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLA 351
                                           E+ +    ++ A ++G+ + A     LA
Sbjct: 278 -------------------------------YEARLYFQKAEFAQQIGNRETAREALELA 306

Query: 352 MKIAPR 357
           + I P 
Sbjct: 307 LDIDPD 312


>gi|24666532|ref|NP_649073.1| CG6841 [Drosophila melanogaster]
 gi|23093178|gb|AAF49211.2| CG6841 [Drosophila melanogaster]
 gi|60678113|gb|AAX33563.1| LD04472p [Drosophila melanogaster]
 gi|220950366|gb|ACL87726.1| CG6841-PA [synthetic construct]
          Length = 931

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 17/240 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +LE  D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDE--- 683

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     E++++  +     +   +    Q +   A        K  P   I       
Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPT-SIPLWILSA 740

Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358
             E   G L +A   LE     + +  V+  +     L  G  + A      A++  P  
Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNA 800



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L   ++    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469


>gi|83311456|ref|YP_421720.1| SPY protein [Magnetospirillum magneticum AMB-1]
 gi|82946297|dbj|BAE51161.1| SPY protein [Magnetospirillum magneticum AMB-1]
          Length = 798

 Score = 45.3 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 88/270 (32%), Gaps = 19/270 (7%)

Query: 96  AAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           AA  +P + +    +  +      H   L  ++  Q      +++ A    +  L + + 
Sbjct: 82  AAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQ-----GRFDEAISHFQEGLALASQ 136

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A  +L       G L+ A     KA +++P        +      A  W+ A+    
Sbjct: 137 DVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWG 196

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +           RA + +A +      G    +      +++L   +        ++L  
Sbjct: 197 RALALEPNHAEVRADMGVALAKL----GRQEEAAECFRRAMELDPGNPAHGYNLGRALQD 252

Query: 273 QNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
             +   A  I  K+  V P     H     I+  L        +    R+ E++  +  +
Sbjct: 253 LGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKL--GQPDQAVASYDRVLELDPANGPA 310

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +   K   E G ++ A      A+++ P 
Sbjct: 311 WLNRGKALYEAGRVEDALDSFRSALRLMPD 340


>gi|332993171|gb|AEF03226.1| tetratricopeptide repeat protein [Alteromonas sp. SN2]
          Length = 389

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 15/185 (8%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASY 246
               +   Y   KEW RAI    +  +   +  +     A      ++      D   + 
Sbjct: 143 AQTQLFSIYQTTKEWDRAIELAERMVECHGDNDDVCERLAHFYCEHAVAKLKDDDQGTAL 202

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYT 300
               +++   ++++   +   +  + Q +   A     ++      W     P +     
Sbjct: 203 SLLQKAVNADEHAVRPWLMLGQLALQQQRYSDARAYFVQVAERDINWFSEAVPSL----- 257

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
             ++E T      A  LE   +E   S + +  + L+ G   QA    +  ++  P    
Sbjct: 258 EKIAEETGDWDSFAESLEAHWQECATSYLAMVDVLLKKGDTTQAADYLLEQLRKRPTMRG 317

Query: 361 F-LLL 364
           F  L+
Sbjct: 318 FKTLM 322


>gi|327190097|gb|EGE57209.1| hypothetical protein RHECNPAF_46003 [Rhizobium etli CNPAF512]
          Length = 354

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 65/231 (28%), Gaps = 18/231 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149
           G++  AA +   A+   SY+     +      +     +     + + A       +   
Sbjct: 126 GVILKAAGDKTAAQ--ASYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCR 183

Query: 150 PA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           P        +  L+ E    GD   A  +  +AL + P                 +   A
Sbjct: 184 PDHVDALLRLAGLFDE---WGDQFEAHHHFREALRLRPGFAEAHNNFGVFLERNGDAQAA 240

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            +   Q  +   ++    A      ++   +  D+ A+      +L        A     
Sbjct: 241 ESHYRQALQLRSDY----AEAHYNYAM-LLEGRDVEAAESHYRAALSSLPMYAEAHNNLG 295

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313
             L  +    +A        ++ P     +  +A +   +  E    +  R
Sbjct: 296 VLLHEKGALTEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQADRYAR 346



 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 71/220 (32%), Gaps = 17/220 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD  +AQ     A+ + P  P                  A     Q  K   +    
Sbjct: 130 KAAGDKTAAQASYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCRPD--HV 187

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+L +A   +  + GD   ++H   E+L+L      A       L      + AE    
Sbjct: 188 DALLRLAGLFD--EWGDQFEAHHHFREALRLRPGFAEAHNNFGVFLERNGDAQAAESHYR 245

Query: 285 KIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +  +        H   A +              RA  L  +     E+   +  +  E G
Sbjct: 246 QALQLRSDYAEAHYNYAML-LEGRDVEAAESHYRA-ALSSL-PMYAEAHNNLGVLLHEKG 302

Query: 340 SIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHN 374
           ++ +A +  + A+++ P      + + LLLA + +    +
Sbjct: 303 ALTEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQAD 342



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 58/184 (31%), Gaps = 12/184 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            KAL++  D P     +      A + + A        +   ++           ++   
Sbjct: 109 EKALELRADYPEAHNNLGVILKAAGDKTAAQASYLDAIRLWPQYPE----AHYNFAILLE 164

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292
           + G    +     ++LK   + + A +  A        + +A     +  ++ P     H
Sbjct: 165 ETGRPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHHFREALRLRPGFAEAH 224

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                ++    + +         +  ++  +  E+    + + LE   ++ A +    A+
Sbjct: 225 NNFG-VFLE-RNGDAQAAESHYRQALQLRSDYAEAHYNYAML-LEGRDVEAAESHYRAAL 281

Query: 353 KIAP 356
              P
Sbjct: 282 SSLP 285


>gi|322421635|ref|YP_004200858.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320128022|gb|ADW15582.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 406

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 6/195 (3%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL +G       +   A             + +   YL      LA+++Y+ A +     
Sbjct: 32  ALSSGATYYQKKDYSRASSEFKRAISLDPTNAQSYNYL--ANAYLAQKKYDDAIKTYRNS 89

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L +  T++    +L     +    N A++    A  ++P        + Q Y+    ++ 
Sbjct: 90  LTLDPTQDSVHTNLGNIYLQQKKYNLAEKEFKAAAKLNPTDTLAPYTLGQLYLQTGRYAE 149

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A T   +  K A            +       +G    +     +++K+      A    
Sbjct: 150 AETQFKKVSKMAPTDPNP----YYSLGATYNKEGKYAEAVKQLTQAIKIRPKMEAAHFEL 205

Query: 267 AKSLISQNKKRKAEV 281
             +  +      A+ 
Sbjct: 206 GVAYAALGDSANAQA 220


>gi|149941651|dbj|BAF64847.1| Cdc27B [Nicotiana benthamiana]
          Length = 750

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 10/208 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNR 225
             D  +A +   +A+ ++P   +       +YV  +++   I       + +A+ +N   
Sbjct: 537 QKDHETALKNFQRAVQLNPRFAYGHTLCGHEYVALEDFENGIKSYQSALRVDARHYNAWY 596

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + +I    E  +  +     H    +L++  +S +       +L +  K  +A  ++E 
Sbjct: 597 GLGMIYLRQEKFEFSE-----HHFRMALRINPHSSVIMSYLGTALHALKKNEEALEVMEL 651

Query: 286 IW---KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                K NP P        +  E+    L     L+E          ++ +I       D
Sbjct: 652 AIIADKKNPLPMYQKANILVSMESFNAALGVLEELKEHAPRESSVYALMGRIYKRRNMYD 711

Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369
           +A     +A+ + P    +  + A IE+
Sbjct: 712 KAMLHFGVALDLKPSATDVATIKAAIEK 739


>gi|124023613|ref|YP_001017920.1| hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963899|gb|ABM78655.1| Hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT
           9303]
          Length = 936

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 11/229 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              N A    ++ +Q+  T   A  ++     R G    A +   K L++ PD P     
Sbjct: 285 GDNNQAIGAFQIAIQLDETFIAAWINIGTALKREGRNQEALQATQKVLELKPDNPDALMN 344

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   Y    +   A+    +  +   +       L         D   +  +    ++SL
Sbjct: 345 LGGIYQDLGKLDLALASTLKSLELKPDNPTAHMNL----GGIYKDLAKLDLALASTLKSL 400

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTV 308
           +L  ++  A I          K   A     K  ++ P +P+    +  IY  L  E   
Sbjct: 401 ELKSDNPNALINLGGIYKDLAKLDLALASTLKSLELKPNNPDALMNLGGIYQDL-GELDP 459

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                   L E+  ++ ++L+ +  I  ++  +D A A  + ++++ P 
Sbjct: 460 ALASTLKSL-ELKPDNPDALMNLGGIYQDLAKLDLALASTLKSLELNPD 507



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 91/261 (34%), Gaps = 42/261 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             +  A +  +  +Q       A          +G+L+ A+ +AT+AL I+ +AP V E 
Sbjct: 116 GNHQEAIDLFKRAIQADPKLIQAYIGAAASHLALGNLDQAESFATQALKINANAPEVNEI 175

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +   +   +AI    ++     +   +    L+   L         A+     ++ 
Sbjct: 176 LGIVFQNKQNPDQAIEHYQKELNINPQARNS----LLNSGLLLLQNRQPTAALESLAKAS 231

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAE-------------VIL----------------- 283
            +  +    S+  A++     + ++A               ++                 
Sbjct: 232 AIAPSEQ-CSLLLAQTHQKLGQLKEAIIEYQKLNINQSNNKLIPFNLGLCLFEIGDNNQA 290

Query: 284 EKIWKVNPHPE--IANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
              +++    +      + ++             L+   ++ E+  ++ ++L+ +  I  
Sbjct: 291 IGAFQIAIQLDETFIAAWINIGTALKREGRNQEALQATQKVLELKPDNPDALMNLGGIYQ 350

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
           ++G +D A A  + ++++ P 
Sbjct: 351 DLGKLDLALASTLKSLELKPD 371



 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 7/205 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G    AQ+   KA  +    P + + +   ++       A+ +  +      E N  
Sbjct: 45  LALGQFEKAQQSLKKAHQLDKTDPEIAKDIGNTFLNLGNQENALQWYEKAL----EINNK 100

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A      +      G+   +      +++     I A I AA S ++     +AE    
Sbjct: 101 YAPAFNNIANLKRQIGNHQEAIDLFKRAIQADPKLIQAYIGAAASHLALGNLDQAESFAT 160

Query: 285 KIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +  K+N   PE+  I   +    +N    ++   +   IN ++  SL+    + L+    
Sbjct: 161 QALKINANAPEVNEILGIVFQNKQNPDQAIEHYQKELNINPQARNSLLNSGLLLLQNRQP 220

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQ 366
             A      A  IAP ++  LLLAQ
Sbjct: 221 TAALESLAKASAIAPSEQCSLLLAQ 245


>gi|323977086|gb|EGB72173.1| TPR repeat-containing protein [Escherichia coli TW10509]
          Length = 389

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCEIALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|330994193|ref|ZP_08318121.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp.
           SXCC-1]
 gi|329758660|gb|EGG75176.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp.
           SXCC-1]
          Length = 1268

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 91/277 (32%), Gaps = 23/277 (8%)

Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L  +I  A     Y+ A   L ++ +   T    A+  +   + R G +  A+R   + L
Sbjct: 388 LVARIIQAINSGHYDAAQSDLALLGRRGNTITLQALQGML--ARRQGHMEEAERLYREIL 445

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
             +P        +    +     + A   + +      +  R+  +  ++   +     D
Sbjct: 446 RRAPGNADALFNLGGILIETGREAEAQDIIARLAHIRPDLARHLEVAGLSARSDRTRNND 505

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE---IAN 297
              S      ++ +        +  A++L       +A+ I++ +       P+    A 
Sbjct: 506 EKLSL--LNRAMAMAPTDPWIRLKLARALDEAGNHAQAQAIMDGVTSGRAVTPDDLQAAI 563

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +Y     +     + RA +L       +ES   ++++A     I+         +   PR
Sbjct: 564 LYAMGRHD-----MARAEQLLARLPPGIESP-GMARVA---EQIELVRRIQE--LNRVPR 612

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQ-SALHAMPDPL 393
               LL+A  ++ +      +         HA  D  
Sbjct: 613 APNALLVALADRPDPTGERGMRIANALLDRHAPQDAQ 649


>gi|326911667|ref|XP_003202178.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
           repeat-containing protein 3-like [Meleagris gallopavo]
          Length = 937

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 27/234 (11%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195
            A E     L++ +T     Y+L      + D   A +   +AL+++P         A++
Sbjct: 600 KAKEAYLRALELDSTNADLWYNLAIVYIELKDPTEALKNFNQALELNPMHKLALFNSALL 659

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            Q     +         Q+  N  +     A       +   D      +     +++KL
Sbjct: 660 MQESGNAQ---LRPEAKQRLLNYVKEEPQDANGYFNLGMLAMDDKKDTEAEAWMKKAIKL 716

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH------LLSE---- 305
             N   A    A       K+  A  ILE         ++   Y        L  +    
Sbjct: 717 QPNFRSALFNLALLYSQTAKELMALPILE---------DLLKYYPDHTKGLILKGDILMN 767

Query: 306 ---NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              + VG  K   ++ E++  +V+    +  +  E   + +A    +  + +AP
Sbjct: 768 QKKDIVGAKKCFEKILELDPNNVQGKHNLCVVYFEERDLIKAEKCLVETLALAP 821


>gi|297834606|ref|XP_002885185.1| HCF107 [Arabidopsis lyrata subsp. lyrata]
 gi|297331025|gb|EFH61444.1| HCF107 [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 18/267 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            NI  AR + +   +     NEY+     LLE + A    +Y  A    +      +   
Sbjct: 285 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKAA----RYEQARYLFKQATICNSKSC 339

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +  +      +     +A++   KA+  SP   +                R    L   
Sbjct: 340 ASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL--- 396

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K     N    +LL +  L          +      + ++        I        + 
Sbjct: 397 -KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASEVDPRHQPVWIAWGWMEWKEG 455

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328
               A  +  +   ++ + E A          E + G L  A RL      IN +S  + 
Sbjct: 456 NTTTARELYLRALSIDANTESAARCLQAWGVLEQSAGNLSAARRLFRSSLNINSQSYVTW 515

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +  +++  + G  ++A     L  +  
Sbjct: 516 MTWAQLEEDQGDSERAEEIRNLYFQQR 542


>gi|262304991|gb|ACY45088.1| acetylglucosaminyl-transferase [Eurypauropus spinosus]
          Length = 290

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N             A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVTEAEECYNTALCLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A    +   ++ P    A+
Sbjct: 66  EQGYTEEATRLYMKALEVFPEFAAAHSNLASVLQQQGKLNEALQHYKDAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIESYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 58/216 (26%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A E     L +  T   ++ +L       G    A R   KAL++ P+
Sbjct: 27  ANALKEKGQVTEAEECYNTALCLCPTHADSLNNLANIKREQGYTEEATRLYMKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+       +    +    A           +  D+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALQHYKDAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIESYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   +LK+            RL  ++   
Sbjct: 201 QIVCDWTDYDNRLKKLLSIVADQLEKNRLPSVHPHH 236


>gi|254804584|ref|YP_003082805.1| IgA-specific serine endopeptidase [Neisseria meningitidis alpha14]
 gi|254668126|emb|CBA04715.1| IgA-specific serine endopeptidase [Neisseria meningitidis alpha14]
          Length = 1832

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 83/266 (31%), Gaps = 31/266 (11%)

Query: 97   AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--- 153
            A+    A++  +   Q      E      E + A   +Q   A  +   +          
Sbjct: 1023 ANQAEEAKRQQAKAEQVKRQQAEA-----ERKSAELAKQKAEAEREARELATRQKAEQER 1077

Query: 154  ---EFAVYSLYFESCRIGDLNSAQR--YATK---ALDISPD--APWVTEAVVQQYVLAKE 203
               E A      E  R     SA++   A +   AL +     A        +     ++
Sbjct: 1078 SSAELARRH---EKEREAAELSAKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEK 1134

Query: 204  WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD--AIESLK-LCDNSI 260
               A   L+ K++  +E  R  A     R    A   D +A+  D       + +  N++
Sbjct: 1135 EREA-AELSAKQRVGEEERRQTAQSQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNV 1193

Query: 261  MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
              +   A+    Q ++RKA  +L K  +     E A               ++A  L   
Sbjct: 1194 EIAQAQAELARRQQEERKAAELLAKQ-RAEAERE-AQALAARRKAEAEEAKRQAAELAHR 1251

Query: 321  NKESVESLVIVSKIALEMGSIDQAHA 346
                 E+    +++A    +  +A  
Sbjct: 1252 Q----EAERKAAELAHRQEAERKAAE 1273



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 70/217 (32%), Gaps = 37/217 (17%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
             R ++K  +A       ++A     A +    ++ +     E        Q A   R++ 
Sbjct: 1083 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1133

Query: 138  IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190
               E  E+  +        R+ A      +  R     + Q Y   A    P       V
Sbjct: 1134 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1188

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD-- 248
             +  V+        ++A   L ++++      R  A LL  +  E   +   +A+     
Sbjct: 1189 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1237

Query: 249  AIESLKLCDNSI---MASICAAKSLISQNKKRKAEVI 282
            A E+ +          A   AA+    Q  +RKA  +
Sbjct: 1238 AEEAKRQAAELAHRQEAERKAAELAHRQEAERKAAEL 1274



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 12/230 (5%)

Query: 163  ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            E  +     + ++ A  A   +       E   +Q    +  S  +   ++K++ A E +
Sbjct: 1037 EQVKRQQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEKEREAAELS 1096

Query: 223  RNRAILLI--ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              + +     A++L    K +   +   A E  +  +    A+  +AK  + + ++R+  
Sbjct: 1097 AKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQRVGEEERRQTA 1156

Query: 281  VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                +  K    P     Y     +    +  R      + + +VE  +  ++  L    
Sbjct: 1157 QSQPQRRKRRAAP---QDYMAASQDRPKRRGHR-----SVQQNNVE--IAQAQAELARRQ 1206

Query: 341  IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             ++  A  +LA + A  +     LA   +A +    +          A  
Sbjct: 1207 QEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAER 1256



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 15/120 (12%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                  LL  
Sbjct: 1168 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA---------AELLAK 1218

Query: 128  QIALAERQYN--IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS 184
            Q A AER+     A  K E         E A      E+ R     + ++ A  KA ++S
Sbjct: 1219 QRAEAEREAQALAARRKAEAEEAKRQAAELAHR---QEAERKAAELAHRQEAERKAAELS 1275


>gi|119505471|ref|ZP_01627544.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium
           HTCC2080]
 gi|119458749|gb|EAW39851.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium
           HTCC2080]
          Length = 396

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 15/164 (9%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI----LEKIWK 288
           ++E     D+  +Y  ++E+L+    +       A     Q    KAE +    +E   +
Sbjct: 217 AVEALMANDLNRAYWYSMEALRYSPGNSSTINMLAILNRRQGDTEKAEQLYVYGIEHAEE 276

Query: 289 -----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                 N H  + N+     +E+ V   KR   L++ +       + +++ A E G   Q
Sbjct: 277 KLTLLKNYHNLLTNL---GRTEDAVSIEKRLQTLDDPSPFHW---IQIARSAYESGEYQQ 330

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           A      A+ +AP      L        +          ++A+ 
Sbjct: 331 AINYFNKAISLAPYLHEAQLGIAQSLYETGELQGAKKALEAAIE 374


>gi|255072419|ref|XP_002499884.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299]
 gi|226515146|gb|ACO61142.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299]
          Length = 864

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 16/184 (8%)

Query: 86  KALYTGLMSI----------AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
            AL  G +SI          A+ ++ LA + +           E +  L   Q      +
Sbjct: 224 HALGRGNLSIALGDRATAIKASGDVALAVRTYERALTLDPNSAEAMYNLGVAQA--EIGE 281

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
            + A    E  L++      A  +L        ++  A     +A+ I+P        + 
Sbjct: 282 LDRATIAYESTLRLRPHCAEAWNNLGVLHRERNNVERAVECYRRAVAINPSFAQPLNNLG 341

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             Y +  +   A+  L +    A  +    A+      +   D GD+  +     E  + 
Sbjct: 342 VVYTMQGQARMALEALQRAVAAAPTY----AVAHNNLGVLLRDTGDVPEALEAYGECARH 397

Query: 256 CDNS 259
             + 
Sbjct: 398 SPDH 401



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 10/236 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A                A Y+L      +G  + A     +A++++P+       
Sbjct: 137 GSPAQAVAHYREAAATDPRYSPAFYNLGVVMSELGRHDEALECYARAIEVNPNHAEAHCN 196

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA---RSLENADKGDMIASYHDAI 250
           V        + + AI    +           R  L IA   R+      GD+  +     
Sbjct: 197 VGVIKKYRGDVTGAIEAYERCLAVNPNHALGRGNLSIALGDRATAIKASGDVALAVRTYE 256

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSEN 306
            +L L  NS  A      +     +  +A +  E   ++ PH   A  + +L       N
Sbjct: 257 RALTLDPNSAEAMYNLGVAQAEIGELDRATIAYESTLRLRPH--CAEAWNNLGVLHRERN 314

Query: 307 TVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            V + ++   R   IN    + L  +  +    G    A      A+  AP   + 
Sbjct: 315 NVERAVECYRRAVAINPSFAQPLNNLGVVYTMQGQARMALEALQRAVAAAPTYAVA 370


>gi|149941649|dbj|BAF64846.1| Cdc27B [Nicotiana tabacum]
          Length = 751

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 10/208 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNR 225
             D  +A +   +A+ ++P   +       +YV  +++   I       + +A+ +N   
Sbjct: 538 QKDHETALKNFQRAVQLNPRFAYGHTLCGHEYVALEDFENGIKSYQSALRVDARHYNAWY 597

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + +I    E  +  +     H    +L++  +S +       +L +  K  +A  ++E 
Sbjct: 598 GLGMIYLRQEKFEFSE-----HHFRMALRINPHSSVIMSYLGTALHALKKNEEALEVMEL 652

Query: 286 IW---KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                K NP P        +  E+    L     L+E          ++ +I       D
Sbjct: 653 AIIADKKNPLPMYQKANILVSMESFNAALGVLEELKEHAPRESSVYALMGRIYKRRNMYD 712

Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369
           +A     +A+ + P    +  + A IE+
Sbjct: 713 KAMLHFGVALDLKPSATDVATIKAAIEK 740


>gi|282897745|ref|ZP_06305744.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197424|gb|EFA72321.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 267

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 14/145 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------ 176
            +L  Q          A +    +L+       ++  +           +A ++      
Sbjct: 113 KVLLAQATQQIGNRQEAIQMYRSILRTQPGNIQSLQGIVKLKLDQKRPEAAIQFLKETIS 172

Query: 177 -ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
            A K+  + P +      + ++   Y   K   +AI+   +  K   +  R     ++A+
Sbjct: 173 NAEKSNSVQPGSFDIIAIQLLLGSVYSSQKNTDQAISLYQEVMKQYPQDFRP----VLAK 228

Query: 233 SLENADKGDMIASYHDAIESLKLCD 257
           ++   ++G +  +      +L L  
Sbjct: 229 AILLKEQGKINEAKPLFDSALTLAP 253


>gi|196232950|ref|ZP_03131799.1| Tetratricopeptide TPR_4 protein [Chthoniobacter flavus Ellin428]
 gi|196222928|gb|EDY17449.1| Tetratricopeptide TPR_4 protein [Chthoniobacter flavus Ellin428]
          Length = 694

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 70/220 (31%), Gaps = 7/220 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R GD   A+ +  + +      P +  A+   Y    E  +    L +      E+   
Sbjct: 423 IRAGDWVDAETFCARTIADGGATPRILSALAGIYGQRGELQKQEQILRKMIVQFPEYAPA 482

Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R    I L  +  +   +  + A++  A +  +    +  A++  A+         +A  
Sbjct: 483 RLNLGICLSRQGKKAEAEALLGATHQQADQVARQYPRTWTAALQLAQLRTDAGHPDEALG 542

Query: 282 ILEKIWKVNP-HPEIANIYTHLLSEN--TVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           IL +     P   E+      +L E       L         +    +S V +  +    
Sbjct: 543 ILREARGRFPDTWELIKGEAEMLRETSGPATALPLVEDFAAKHWWHYDSHVTLGALRFAA 602

Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDK 377
           G  D A      A ++          +A+IE    H+ + 
Sbjct: 603 GQPDAAIRALTAASRLDIYDGRALAGVAEIENTVGHSDEA 642


>gi|195376509|ref|XP_002047039.1| GJ12147 [Drosophila virilis]
 gi|194154197|gb|EDW69381.1| GJ12147 [Drosophila virilis]
          Length = 1187

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 166 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERA 223

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 224 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 282

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 283 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 337

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 338 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 397

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  +      A  I   K  + + A+I
Sbjct: 398 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 452



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 312 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 371

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    + 
Sbjct: 372 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 431

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A+  LE                 
Sbjct: 432 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKLAKDTLESA--------------- 476

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    + + +  ES        ++++   M S D A       +K  P
Sbjct: 477 ---------LKHASSEMDKDVKYYESIQVTMKYNLARLNEAMSSFDVADKLYKEILKEHP 527


>gi|190344528|gb|EDK36216.2| hypothetical protein PGUG_00314 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 659

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 81/257 (31%), Gaps = 22/257 (8%)

Query: 135 QYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
            +  +      +  I  TR          ++ L+ +     DL      A +  ++   +
Sbjct: 392 NHRQSEHYFVQLRSIDRTRLEDMEYYSTLLWHLHKKV----DLT---YLADELHEVDAKS 444

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P     V   + L ++   AI+  N+  +     +R        +  E     +   +  
Sbjct: 445 PITWCVVGNLFSLNRDTDDAISCFNKAIR----ADRKFTYAYTLKGHEYFGNDNYEMALE 500

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           +   SL +      A        I+    ++A+    K   +NP   I      ++ E  
Sbjct: 501 NFRTSLLIDPRHYNALYGIGMVYINLGDFQRADYHFRKAVSINPINIILICCMGMVLEKV 560

Query: 308 VGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
             +   L++     ++   +   +   +++   M    QA A   +   +AP    +  L
Sbjct: 561 GKRHLALRQYELATKLQPNNPLPIFKKAQLLFTMQQYSQALAAFEILRDLAPDEASVRFL 620

Query: 364 LAQIEQANSHNTDKILY 380
           L Q+    +     +  
Sbjct: 621 LGQLYNIQNEKAKAVRE 637


>gi|153872213|ref|ZP_02001170.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152071321|gb|EDN68830.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 721

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 22/192 (11%)

Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A      N A++     + Q    R+  +  L   + R G++  +Q Y  + L + P   
Sbjct: 533 AFQGGDDNTAYQAYQRALQQDERNRDALL-GLGALAMRSGNMRLSQYYYQRVLKLYPQDT 591

Query: 189 WVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +   A+   + +                + K   E     A +        A++G    +
Sbjct: 592 YAVVALGNTLDKRSPES---------ESQLKLLLEQTPQSAHIHFNLGTFYANQGQWAKA 642

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                ++ +  +     +   A SL   N+   A    +K  ++  H         ++S 
Sbjct: 643 QQAYFDAYRYDNTQADYAYNLAISLDHLNQSSAALTYYQKALQLAQH--------QVVSF 694

Query: 306 NTVGKLKRALRL 317
           N     KR   L
Sbjct: 695 NPATVQKRVQTL 706


>gi|187479100|ref|YP_787125.1| cellulose synthase protein C [Bordetella avium 197N]
 gi|115423687|emb|CAJ50237.1| cellulose synthase protein C [Bordetella avium 197N]
          Length = 1323

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 5/125 (4%)

Query: 163 ESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           E+ R  GDL +A       L   PD      A+ + Y  A +  +A+    +   N  + 
Sbjct: 690 EAMRQRGDLVAAYDMLQPVLKRRPDDALAQGALARMYAAAGDRDKAVEIYRKLLANDPD- 748

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L +A +  +A+  D   +      +L L          AA+   ++    +A  
Sbjct: 749 ---NATLQLAFAGISAEMNDWRTAEKAVDRALALAPKDPDVLAGAARLYRARGYTGRAAE 805

Query: 282 ILEKI 286
           + +  
Sbjct: 806 LYQAA 810



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 92/316 (29%), Gaps = 37/316 (11%)

Query: 69  PAMLFHMLHKRNYDKGYKALYTG-LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
           PA            +G++AL    L++           + +  +         LV + + 
Sbjct: 262 PAAAPAWRQDARLARGFEALKQSDLLAA---ESAFQETLRAKPNDPDALGGMGLVRMQQG 318

Query: 128 QIALAERQYNIAHEKLEM----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +   AE     A             + + R +++      + + G+   A++   +A+ +
Sbjct: 319 RATEAEDFLKCAAAAPNAGRNWSRALSSARYWSLIDQAESARKRGETAEARKLLEQAIRL 378

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                    A+ + +  A + + A        +     ++N A  ++  +   A  G   
Sbjct: 379 DGSQASAFNAMGRVFSSAGDTANAEKT----YRYVLARHKNDAEAIVGLADVLAQDG--- 431

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
                A E+L+L D+        A +         A                  +     
Sbjct: 432 ----RAEEALRLIDSLPPEQAARAGNAARLRATVAASRA-------------RVVARDGD 474

Query: 304 SENTVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +      L+RA   +  N   + E    ++++ L  G   QA        +  P     L
Sbjct: 475 AAAAREVLERARAADPANPWLNYE----LARLMLREGKAGQAQRLVDDFERAHPDTPDAL 530

Query: 363 LLAQIEQANSHNTDKI 378
             + +  +        
Sbjct: 531 FASALLASERSEWGAA 546



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 8/161 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TRE 154
            ++  A  M   V ++    ++ L      ++  A    + A E    +L       T +
Sbjct: 696 GDLVAAYDMLQPVLKRR--PDDALAQGALARMYAAAGDRDKAVEIYRKLLANDPDNATLQ 753

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A   +  E   + D  +A++   +AL ++P  P V     + Y       RA       
Sbjct: 754 LAFAGISAE---MNDWRTAEKAVDRALALAPKDPDVLAGAARLYRARGYTGRAAELYQAA 810

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                +     A         N   G        A  +  L
Sbjct: 811 IALQDQRTGLLAQAPAGAVQSNPFAGLPGQRAESARVAQVL 851



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 73/248 (29%), Gaps = 33/248 (13%)

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             +   + P    +     +  + +  +     +        ARK+     +        
Sbjct: 326 FLKCAAAAPNAGRNWSRALSSARYWSLIDQAESARKRGETAEARKLLEQAIRLDGSQASA 385

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              +   ++  +      A +    +L        A+  L        D+ +    A +A
Sbjct: 386 FNAM--GRVFSSAGDTANAEKTYRYVLARHKNDAEAIVGLA-------DVLAQDGRAEEA 436

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L +    P                        ++   A    R RA +  +R+   A  G
Sbjct: 437 LRLIDSLP-----------------------PEQAARAGNAARLRATVAASRARVVARDG 473

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
           D  A+      +      +   +   A+ ++ + K  +A+ +++   + +P  P+     
Sbjct: 474 DAAAAREVLERARAADPANPWLNYELARLMLREGKAGQAQRLVDDFERAHPDTPDALFAS 533

Query: 300 THLLSENT 307
             L SE +
Sbjct: 534 ALLASERS 541



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 51/167 (30%), Gaps = 11/167 (6%)

Query: 99  NIPLARKMHSYVSQQHTFHN----EYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPA 151
           +  +A  +     Q+         + LV L  ++ A A RQ        +M+   L+   
Sbjct: 654 DARVADVLRQVQKQKLDPDQHRSFQDLVSLYTIRQAEAMRQRGDLVAAYDMLQPVLKRRP 713

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A  +L       GD + A     K L   PD   +  A         +W  A   +
Sbjct: 714 DDALAQGALARMYAAAGDRDKAVEIYRKLLANDPDNATLQLAFAGISAEMNDWRTAEKAV 773

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           ++    A         +L   +     +G    +      ++ L D 
Sbjct: 774 DRALALAP----KDPDVLAGAARLYRARGYTGRAAELYQAAIALQDQ 816


>gi|53728749|ref|ZP_00135485.2| COG2956: Predicted N-acetylglucosaminyl transferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208217|ref|YP_001053442.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae
           L20]
 gi|126097009|gb|ABN73837.1| hypothetical protein APL_0737 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 398

 Score = 45.3 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 91  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIEKIKACY 266

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYPSMITF 325

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348


>gi|312958848|ref|ZP_07773367.1| TPR domain protein [Pseudomonas fluorescens WH6]
 gi|311286618|gb|EFQ65180.1| TPR domain protein [Pseudomonas fluorescens WH6]
          Length = 574

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 54/133 (40%), Gaps = 8/133 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+  ++L    + D   +    +E     +  +   +  A+ L + N+ ++A  +LEK  
Sbjct: 188 LIFGKAL-LLQQDDEAEAALKLLEQNPPEEGEVAPILLRARLLQNLNRGKEAIPLLEKSI 246

Query: 288 KVNPHPE---IANIYTH-LLSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSID 342
           K   +P+   +   Y   L+ ++ +   K +   L +   +  E    ++ + LE  + D
Sbjct: 247 KK--YPDDKRLRLTYARMLVEQDRMEDAKVQFANLVQQYPDDDELRYSLALVCLEAKAWD 304

Query: 343 QAHAKAMLAMKIA 355
           +A       ++  
Sbjct: 305 EAKGYLQELIERE 317



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 96/288 (33%), Gaps = 11/288 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +     K+      Q    ++ L Y L   + L  + ++ A   L+ +++  +  + A  
Sbjct: 267 DRMEDAKVQFANLVQQYPDDDELRYSL-ALVCLEAKAWDEAKGYLQELIERESHVDSAHL 325

Query: 159 SLYFESCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           +L   +    D  +A   YA            + +A     +       A   L   +  
Sbjct: 326 NLGRIAEERNDPQAALLEYAQVGPGNDYLPAQLRQA--DILMSNGRTDEAEKRLAAARDA 383

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             ++      L + ++   +       ++    ++L    + +      A     +N   
Sbjct: 384 EPDYAIQ---LYLIQAETLSANNQGERAWKLLQQALLQFPDDLNLLYTRAMQAEKRNDLA 440

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSK 333
           + E  L  I K +P   +A         +   +   A  L     ++N E    L  +  
Sbjct: 441 QMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRYDEAKVLIEQAHKLNPEDPAVLDSLGW 500

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
           +   +G++D+A      A++  P +E+   L ++  AN    +    W
Sbjct: 501 VNYRLGNLDEAERLLRQALERFPDQEVAAHLGEVLWANGKQREARQIW 548


>gi|307544992|ref|YP_003897471.1| hypothetical protein HELO_2402 [Halomonas elongata DSM 2581]
 gi|307217016|emb|CBV42286.1| hypothetical protein HELO_2402 [Halomonas elongata DSM 2581]
          Length = 790

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 54/200 (27%), Gaps = 25/200 (12%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+  SA + A +A+                     +  R    +    ++       R  
Sbjct: 17  GEPKSALQQAQRAM------------------AEGDLERVEALVEHAVQSGDPHPGERR- 57

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI- 286
           L +  +         +     A+E+               +   +  K R+A   + +  
Sbjct: 58  LWVRIAFRQGHIDSALERSKKALEAQPNDPQLR---ALDVRIQAAAGKPRRALHRVNQAI 114

Query: 287 --WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             W  +P   +  +        T   L    +L      + E L+ V++     G     
Sbjct: 115 PRWPNSPRLRLVKLQLLRDLGRTRPALHVLRQLRRRWPRNPEVLIAVAQFYRAHGRFRAT 174

Query: 345 HAKAMLAMKIAPRKEIFLLL 364
                  ++  P+     ++
Sbjct: 175 RTVLDHLLEHHPKHRQARVM 194



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 12/177 (6%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQ 174
           E    L + Q A+AE         +E  +Q     P  R   V      + R G ++SA 
Sbjct: 18  EPKSALQQAQRAMAEGDLERVEALVEHAVQSGDPHPGERRLWVR----IAFRQGHIDSAL 73

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
             + KAL+  P+ P +    V+    A +  RA+  +NQ         R R + L     
Sbjct: 74  ERSKKALEAQPNDPQLRALDVRIQAAAGKPRRALHRVNQAIPRWPNSPRLRLVKLQL--- 130

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              D G    + H   +  +    +    I  A+   +  + R    +L+ + + +P
Sbjct: 131 -LRDLGRTRPALHVLRQLRRRWPRNPEVLIAVAQFYRAHGRFRATRTVLDHLLEHHP 186


>gi|251772286|gb|EES52856.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 555

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 101/287 (35%), Gaps = 38/287 (13%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           + + A +    +L+        +  +   +  + +   A       L+   +   +   +
Sbjct: 192 KSSQALKFFRKLLRKSPRNIRLLRHVARLAANVNEFGRALDTYRLLLEEEGETAELCLLM 251

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            + + +A +   A+ F+ +    A E    + +L     L   D GD   +  +A+  + 
Sbjct: 252 AETHKMAGKPLAALPFVRRALALAPESREAQLLL----GLLQVDIGDPEKA-EEALAGID 306

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENT--- 307
                           + + +  KA V L + + + P P    E+  +        T   
Sbjct: 307 SAPGH----YQLGDLWLRKKRPEKAAVALLRGFVIRPDPYYIPELLKLLARFEDTFTFLE 362

Query: 308 --------------VGKLKR--ALRLEEINKESVESLVI----VSKIALEMGSIDQAHAK 347
                          G++ R  A R+E     S ++  +    +++  L     ++A+A 
Sbjct: 363 TLALTRILFPDTPIPGRILRQVAERIESEKPPSDDAHRLATLGLARAFLPREDRNEAYAL 422

Query: 348 AMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
              A+ + P  E+ + +LA I++ +  +    L W    L A  +P+
Sbjct: 423 LEQAVTVDPLSEVPYWVLAMIDE-DRKDYRGALRWYDRILSASREPV 468



 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 92/303 (30%), Gaps = 47/303 (15%)

Query: 95  IAAHNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           +A  ++   R+    +            +  V  L       +   + A E     + I 
Sbjct: 8   VAIGDLIRKRRYSEALDLLDRTAPERDRDSAVETLRGMALEGQGLLSQAEECYWKAVAIE 67

Query: 151 ATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             R    + L      R  +   A     + L + PD P +         L   W  A+ 
Sbjct: 68  KNRSALPFLLLGLLKDRTDERKKALWVLEEGLRLFPDDPDLLREAGILNGLEGRWPLALP 127

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            + +  +                        + I +    +++L+L D     +      
Sbjct: 128 MILEAHRRIPS------------------SPENILAMASTVDTLELIDLFAPMA------ 163

Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVE 326
                  R  E +LE     NP +P+I + Y   L   E +   LK   +L   +  ++ 
Sbjct: 164 -------RNLENLLEA----NPENPDIQDWYGRSLERIEKSSQALKFFRKLLRKSPRNIR 212

Query: 327 SLVIVSKIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK---ILYWT 382
            L  V+++A  +    +A     +L  +     E+ LL+A+  +           +    
Sbjct: 213 LLRHVARLAANVNEFGRALDTYRLLLEEEGETAELCLLMAETHKMAGKPLAALPFVRRAL 272

Query: 383 QSA 385
             A
Sbjct: 273 ALA 275


>gi|162455529|ref|YP_001617896.1| hypothetical protein sce7247 [Sorangium cellulosum 'So ce 56']
 gi|161166111|emb|CAN97416.1| hypothetical protein sce7247 [Sorangium cellulosum 'So ce 56']
          Length = 1267

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 66/216 (30%), Gaps = 7/216 (3%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQY 136
            R   +   ++   L++         ++     +       E    LL + ++A     +
Sbjct: 391 ARRSAEAAPSVRRYLLAGQLSEDRNQQRAWIERAAALAGGREDTDVLLSQARLAQTSPNW 450

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-PWVTEAVV 195
             A    E +L        AV  L       G   +A     +AL   P +   +  +  
Sbjct: 451 REAAPIYERILASDPDHVAAVLGLVDLYVEAGLKRTALATLERALARQPSSVSLLRASAA 510

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q   L ++   A            + +     + +A +       D   +       L+ 
Sbjct: 511 QLRALGRDTEAAEMEARYAALRFDDSSFLHQQVELAVARR-----DPAGAERWIERFLRS 565

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +S+ A   AA++  +  +  +A    ++   + P
Sbjct: 566 EPDSVWARTVAARTYRALGQGDRALAAHQRALAMAP 601



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 69/240 (28%), Gaps = 43/240 (17%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKK 215
             L          + A+  A ++ + +P      +   + +     + W          +
Sbjct: 372 RYLMLTGGDAEGEHRARDLARRSAEAAPSVRRYLLAGQLSEDRNQQRAWIE--------R 423

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             A    R    +L++++       +   +       L    + + A +      +    
Sbjct: 424 AAALAGGREDTDVLLSQARLAQTSPNWREAAPIYERILASDPDHVAAVLGLVDLYVEAGL 483

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKI 334
           KR A   LE+     P              ++V  L+  A +L  + +++  + +     
Sbjct: 484 KRTALATLERALARQP--------------SSVSLLRASAAQLRALGRDTEAAEMEARYA 529

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
           AL        H +  LA+                     +      W +  L + PD +W
Sbjct: 530 ALRFDDSSFLHQQVELAVARR------------------DPAGAERWIERFLRSEPDSVW 571


>gi|91080933|ref|XP_974172.1| PREDICTED: similar to GA17918-PA [Tribolium castaneum]
          Length = 947

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 39/244 (15%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  P+   
Sbjct: 602 NRTKEAQEVYERALLYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHE- 656

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKG 240
             +A++   +L       +   N+ +       R   +L              +   D+ 
Sbjct: 657 --QALLNSAIL-------LQEFNRPELRKIARERLLKLLDKDSNNERVHFNLGMLAMDEK 707

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------ 294
           ++  + H    ++ L  +   +    A  L    +  +A   L +   V  HP+      
Sbjct: 708 NIEEAEHWFRRAVHLKADFRSSLFNLALLLADDQRPLEAAPFLNQ--LVKYHPDHVKGLI 765

Query: 295 -IANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            + +IY  ++   +      R  R+ E++ E+++ L  +  + +E G + +A A    A 
Sbjct: 766 LLGDIYINNIKDLDAAENCYR--RILELDPENIQGLHNLCVVHVERGKLLEAQACLEKAH 823

Query: 353 KIAP 356
           ++AP
Sbjct: 824 QLAP 827


>gi|192359108|ref|YP_001981437.1| putative TPR domain-containing protein [Cellvibrio japonicus
           Ueda107]
 gi|190685273|gb|ACE82951.1| putative TPR domain protein [Cellvibrio japonicus Ueda107]
          Length = 383

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 23/192 (11%)

Query: 208 ITFLNQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC- 265
           +       K  +      A      R +E A  G+  A++ +  ++L L      AS   
Sbjct: 196 LRLFRANYKQREISKDQIAAQFYSNRGMELAANGEFSAAFLNLRKALLLEPK---ASYIW 252

Query: 266 --AAKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGK--LKRAL 315
                    Q    +AE I  +   VNP      H  +A +Y   + ++   K  + R  
Sbjct: 253 SNFGSLYRRQGLLPEAEAIYLRGLNVNPSDYTIMH-NLAGLYRE-MGDDAKQKEYMSRVR 310

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANS-- 372
           R    N         V++  L+     QA      A+K   ++   + L  +I +A    
Sbjct: 311 RHRSANPYY---QYKVAQEKLDAKEYGQARLYIEKAIKQEKKEPRFYRLAIEIYEAMGDQ 367

Query: 373 HNTDKILYWTQS 384
              D+       
Sbjct: 368 KAADRARELLDK 379


>gi|189425157|ref|YP_001952334.1| hypothetical protein Glov_2098 [Geobacter lovleyi SZ]
 gi|189421416|gb|ACD95814.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 566

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 76/239 (31%), Gaps = 17/239 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                 A  +Y+ A    +  L+    R   +  L     +      A  Y  K   +  
Sbjct: 214 MAISYEALGEYDKAIAAYKNALEDAENRAPLIQHLIQLFIQNRRYEDALTYLKKLDQMGL 273

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   +   Y+  +++  AI   +Q  +   + ++ R  L +  + E  ++ +    
Sbjct: 274 ATAETNRKIGLIYLELEQYDDAIKVFSQMLETDPDAHQIR--LYLGSAFEEKNELE---- 327

Query: 246 YHDAIESLKL---CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
               +E  K+         A    A       +  +A  +LE+    N   +  ++Y  L
Sbjct: 328 -RAVVEFHKIPADAPVYPEAVGHLAFIYKELGRGDEAVRLLEQTIAANQ--DKLDLYLSL 384

Query: 303 LS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +     ++    LK    +E    +       +  +  ++G   ++  +    + + P
Sbjct: 385 ATLHDALQHPAEGLKLLQGVEARFADDPRFQFRMGILYDKLGKRPESIERMKKVVVLNP 443



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 85/277 (30%), Gaps = 25/277 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATR--- 153
            N+  A  +      Q          LLE +I L   +   +   +   +   P  R   
Sbjct: 52  GNVEQALILTRQA--QTADPVTPYPILLEAEILLKSGRVQDSLAAVDRAIKVAPDYRPSY 109

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                S+      +G    A  Y   A+ + P        +V   +   E+  ++T L  
Sbjct: 110 LLGG-SIMS---TMGKTKEAAAYLRNAVRLEPGKEDAVLHLVTTLMQLFEYEESVTVLKS 165

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K   E     A+     +   +       S     ++L+L    I A+I  A S  + 
Sbjct: 166 LIKVKPES----AVGNYYLAKVYSQMKLYRESIGYYQKALELRPEFIQATIDMAISYEAL 221

Query: 274 NKKRKAEVI----LEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
            +  KA       LE      P   H  +  ++           L    +L+++   + E
Sbjct: 222 GEYDKAIAAYKNALEDAENRAPLIQH--LIQLFIQNRRYE--DALTYLKKLDQMGLATAE 277

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           +   +  I LE+   D A       ++  P      L
Sbjct: 278 TNRKIGLIYLELEQYDDAIKVFSQMLETDPDAHQIRL 314


>gi|13476728|ref|NP_108297.1| hypothetical protein mlr8130 [Mesorhizobium loti MAFF303099]
 gi|14027489|dbj|BAB53758.1| mlr8130 [Mesorhizobium loti MAFF303099]
          Length = 289

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 83/244 (34%), Gaps = 11/244 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A     + +A +  E+ L+         + L        DL+ A+ +   +L    
Sbjct: 15  RAVAAFNSGNHGLAMQLCELGLKQHPDDPALCHLLAAVLFARADLSGARTHIETSLAARA 74

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D         +       +  A+  L++  K + +       + I R+      G+ +A+
Sbjct: 75  DNVPALILACKIARADGRFEAALQQLDRAAKLSSQAE-----IPIERARTFDQAGNALAA 129

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTH 301
                  L+    S  A+    +    +    +AE  LE+      HP    ++  +   
Sbjct: 130 REWWTLVLQRDPKSEEAAARLGRLAWQRGASVEAEGFLERAVASGGHPSAWFDLGLVRQD 189

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +         +   R+ E++ ++ E+ V +  +  E G +D A      A ++ P     
Sbjct: 190 MRKFGAAA--QAYRRVLEMSPDAPEAAVNLGVVLQETGDLDGAMLAYSTAYRLRPSTFGV 247

Query: 362 LLLA 365
           + +A
Sbjct: 248 IAMA 251


>gi|116619265|ref|YP_821421.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222427|gb|ABJ81136.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 608

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/254 (11%), Positives = 61/254 (24%), Gaps = 44/254 (17%)

Query: 130 ALAERQYNIAHEKLE-MMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           A    Q   A       +   P+ T          +    GD   AQ    +A+++ P  
Sbjct: 46  ADDAGQRAEAIAAYSDALAADPSNTEALRARG--KDYQADGDRAKAQADFDRAIELQPAR 103

Query: 188 PWVTEAVVQQYVLAKEWSRAIT--FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                     +    +  RAI    L    K           +   R+       +   +
Sbjct: 104 AEGYVVRAGFFAATGQPERAIHDYTLAINLK------MEHVDVYSGRAKAYTATREFDKA 157

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
             D  ++++L  +                               NP P +          
Sbjct: 158 EEDFTQAIRLRLD-------------------------------NPEPYLGRGIARAEQR 186

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL 364
                ++          +  E  V  +     +     A      A+K+ P     + + 
Sbjct: 187 KYRDAIEDFDSCIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVR 246

Query: 365 AQIEQANSHNTDKI 378
             + +  S +   +
Sbjct: 247 GAVRERLSDDAGAV 260


>gi|308050459|ref|YP_003914025.1| type IV pilus biogenesis/stability protein PilW [Ferrimonas
           balearica DSM 9799]
 gi|307632649|gb|ADN76951.1| type IV pilus biogenesis/stability protein PilW [Ferrimonas
           balearica DSM 9799]
          Length = 257

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 70/210 (33%), Gaps = 35/210 (16%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R GD+  A+    KAL  +PD      A+   +    +  +A     +    A   NR+
Sbjct: 52  LRRGDMEQAKFNLDKALKQAPDLDEAHLALAFYFETVSDTDQA----ERAYLRALRVNRH 107

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-------ICA--------AKS 269
            A       +    +G    +      ++    + I  +       ICA        A+ 
Sbjct: 108 NADAANNYGVFLCREGRFKEADTWMRRAVNN-PDYIRQAQTYENLGICAREAGWNDKAQG 166

Query: 270 LISQN---KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
              Q      R+A  +LE         E+A  +           L R     +   ES +
Sbjct: 167 YFEQALNYDPRRAVSLLEVA-------ELA--FAARQPAKARKYLGRYH---DGGNESAQ 214

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           SL++  ++ALE    D A    +L +   P
Sbjct: 215 SLLLGVELALEAEDTDAARRYGVLLLAKYP 244


>gi|258591099|emb|CBE67394.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 251

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 64/190 (33%), Gaps = 6/190 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G+ +  A     A + +  V  Q   H   + +    QI   + Q   A  + E +L
Sbjct: 50  LEQGIQAHNARQYEQAVEWYHRVLAQDPGH--PVAHYNLGQIYTVQGQPAKAQWEYEAVL 107

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +       A  +L     R      A   + +AL +SP  P     +    +      +A
Sbjct: 108 RADPRHLDAWINLGVALYRQRKFQEAAEASRQALTLSPRHPMALFNLGVTLLEMDRPDQA 167

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           IT+L    +     ++ RA            +  +  +     +++ L  +  MA +  A
Sbjct: 168 ITWLTAALQE----DQKRADTHYYLGHAYLKQQRVAEARRSLEKAIALNPDLQMAHLTLA 223

Query: 268 KSLISQNKKR 277
           K    Q   +
Sbjct: 224 KLARQQGDSK 233


>gi|163856379|ref|YP_001630677.1| hypothetical protein Bpet2068 [Bordetella petrii DSM 12804]
 gi|163260107|emb|CAP42408.1| putative exported protein [Bordetella petrii]
          Length = 537

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 62/212 (29%)

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
                ++  A +  +  +  +A  +LE    V+  P +   Y    ++    +L +A   
Sbjct: 266 TLPEIALAGATAFEAAGEPAEAARVLEAAVPVHFTPSLVAAYARCDADQVPRRLAKAEGW 325

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +      + L  +  + L      QA      ++          LL  +        D 
Sbjct: 326 LQKRPADADLLAALGMLCLNGQLWGQAERYLQRSLGFRNDSHTHALLGSLYDRLDRPADA 385

Query: 378 ILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINF 437
           + +W  +   +M  P+   D    ++              +    P   P  +++   + 
Sbjct: 386 VRHWRLATAASMALPVLAVDQALPAAETSADPLHLDAEGEYSAYPPESGPSSVTAMYSSE 445

Query: 438 SLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469
           +L  A PAD +             +       
Sbjct: 446 TLPQAVPADYVLDPDARAADREHSAATDPEPA 477


>gi|39995514|ref|NP_951465.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39982277|gb|AAR33738.1| TPR domain protein [Geobacter sulfurreducens PCA]
          Length = 748

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 72/208 (34%), Gaps = 14/208 (6%)

Query: 97  AHNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           A +     K+              +  +  L    A    +          +      R 
Sbjct: 482 AGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADL-GRIKEEVGLYANLAIREQNRV 540

Query: 155 FA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAI 208
           +A      +  ++ ++GD    ++ A + ++  P  PWV     +   +     ++ R +
Sbjct: 541 YAPELYRRILHDAEQLGDPTLMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVV 600

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMIASYHDAIESLKL----CDNSIMAS 263
             L+    +        ++  + +SL+ + ++ D   +    +  L+        +  AS
Sbjct: 601 GRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAMLLFLAELRRREMSSPLAADAS 660

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291
             AA + +S+  ++ A+ IL    + +P
Sbjct: 661 YVAATARLSRGDRKGAKEILRAAGEASP 688


>gi|294676069|ref|YP_003576684.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
 gi|294474889|gb|ADE84277.1| TPR repeat domain protein [Rhodobacter capsulatus SB 1003]
          Length = 572

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 1/169 (0%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL   I  ++ QY++A      +         A           G  ++A          
Sbjct: 300 LLIADILESQDQYDLAIAAYAEIGPDNPAFYAAELGRAQAMVSAGQSDAAIGVLEALSRS 359

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            PD P    ++       + ++ A T  ++              L  +R++     G   
Sbjct: 360 HPDLPNAWSSLGDTLRREERYAEAATAYDKAIALTGTPRPADWSLWYSRAIAQERSGQWD 419

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291
            +     E+LKL  +  M       S + +    ++A  ++EK     P
Sbjct: 420 KAEKGFREALKLSPDQPMVLNYLGYSYVEKRQNLKEALEMIEKAVAGRP 468


>gi|307731322|ref|YP_003908546.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307585857|gb|ADN59255.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 602

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 73/239 (30%), Gaps = 15/239 (6%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +   G  ++A     + L + P            +    +   A   ++Q  K+    
Sbjct: 28  LHAHEAGRFDTADSIYREILALDPANTRALHYFGVLHYQRGQHEAAAILMSQALKH---- 83

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R  A     R L  A  G +  +     ++L+L  N   A      +L +Q    +A  
Sbjct: 84  DRQDAACWSNRGLAAAALGRLDEATICYDQALQLQPNFADARNNFGVALQAQGALNEAVE 143

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVESLVIVSKI 334
                   NP    A +  HL     +GKL R    L       +++  S E+       
Sbjct: 144 QYRLAIASNP----ALVDAHLNLGTALGKLGRFAEALACYRNALQLDPASAEAHFNAGNA 199

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
               G  + A A    A+ + P      +          +        + A+   P+P 
Sbjct: 200 HNARGEHEAAVASFERALALRPDYAEAHVNLGSAIGKRGDYAGAEAHYRRAVELKPNPT 258



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 49/163 (30%), Gaps = 5/163 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            ++  A       LQ+      A ++        G+  +A     +AL + PD       
Sbjct: 170 GRFAEALACYRNALQLDPASAEAHFNAGNAHNARGEHEAAVASFERALALRPDYAEAHVN 229

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +++ A     +  +            L+        +G +        E+L
Sbjct: 230 LGSAIGKRGDYAGAEAHYRRAVELKPNPT-----NLVCMGGALGAQGRLAEEEKFYREAL 284

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               N   A    A  L+ Q   R+      + W+ + +  +A
Sbjct: 285 AQDPNYADAHQNLAWLLLKQGDYRQGWAEFARRWRKSDYEALA 327



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 68/234 (29%), Gaps = 15/234 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD- 186
           A    +++ A      +L +    TR    + +     + G   +A    ++AL      
Sbjct: 30  AHEAGRFDTADSIYREILALDPANTRALHYFGVL--HYQRGQHEAAAILMSQALKHDRQD 87

Query: 187 -APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            A W    +            A    +Q  +    +   R    +A       +G +  +
Sbjct: 88  AACWSNRGL--AAAALGRLDEATICYDQALQLQPNFADARNNFGVA----LQAQGALNEA 141

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHL 302
                 ++      + A +    +L    +  +A        +++P    A       H 
Sbjct: 142 VEQYRLAIASNPALVDAHLNLGTALGKLGRFAEALACYRNALQLDPASAEAHFNAGNAHN 201

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                   +    R   +  +  E+ V +     + G    A A    A+++ P
Sbjct: 202 ARGEHEAAVASFERALALRPDYAEAHVNLGSAIGKRGDYAGAEAHYRRAVELKP 255


>gi|156741814|ref|YP_001431943.1| hypothetical protein Rcas_1834 [Roseiflexus castenholzii DSM 13941]
 gi|156233142|gb|ABU57925.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 593

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 81/236 (34%), Gaps = 7/236 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           E +   A      A E+    ++   +   A +     +  +    +A    T+AL + P
Sbjct: 311 EAEELAASGSLGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQNAVDDFTRALALDP 370

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +         + +   +++  AI    +        +    +LL+ R +   DKG    +
Sbjct: 371 ENAEAYHQRARAFYRLQQYDEAIRDFTEALARDPNND----VLLMRRGVAYRDKGQYDEA 426

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THL 302
             D  +SL+L  +        A    +  +  +A    ++   + P   +A +      L
Sbjct: 427 LADFDQSLQLNPDVSFTYYHRALLFQATGRLERARADFDRALTIAPEYRLAYVGRGGLRL 486

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              +  G L+   R  E++   +++    ++ A+ +     A A     +   P  
Sbjct: 487 EQGDARGALRDCTRAIELDATEIDAYFCRARAAIALRDYRAAVADLDTVIARDPDS 542



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 39/236 (16%)

Query: 136 YNIAHEKL-EMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           Y+ A     E + + P      +   + +     G  + A     ++L ++PD  +    
Sbjct: 389 YDEAIRDFTEALARDPNNDVLLMRRGVAY--RDKGQYDEALADFDQSLQLNPDVSFTYYH 446

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +       RA    ++    A E+     +  + R     ++GD   +  D   ++
Sbjct: 447 RALLFQATGRLERARADFDRALTIAPEYR----LAYVGRGGLRLEQGDARGALRDCTRAI 502

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    I A  C A++ I+    R A   L+ +   +  P+ A+ Y              
Sbjct: 503 ELDATEIDAYFCRARAAIALRDYRAAVADLDTVIARD--PDSADAYRE------------ 548

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
                              +    +   D+A A    A+++   +     LA++E+
Sbjct: 549 -----------------RGRAHQALRDTDEARADYQRAIELYRLQGRDKDLAEVEK 587


>gi|119386185|ref|YP_917240.1| adenylyl cyclase class-3/4/guanylyl cyclase [Paracoccus
           denitrificans PD1222]
 gi|119376780|gb|ABL71544.1| adenylyl cyclase class-3/4/guanylyl cyclase [Paracoccus
           denitrificans PD1222]
          Length = 596

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 22/198 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEW--------SRAITFLNQKKKNAKEWNRN 224
           A+R   +A D+ PD      A+        EW          A+       K A + +  
Sbjct: 375 ARRLFEEARDLDPDYGRSYAAM--SRTFNVEWRYNWTSNPDAALNQALVLAKRAVQCDAL 432

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            +       L +  K     +      +L L  N           L    +  +A  +LE
Sbjct: 433 DSRGFSEMGLAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAYVRQGERAVQLLE 492

Query: 285 KIWKVNPH-PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +  ++NP+ P+     + + Y H          K    L  +  +  E+  +++     +
Sbjct: 493 RAMRLNPYFPDAYLWFLGDAYFHHGDYG-----KTIETLSRMR-DQSEAHRLLAASHALL 546

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G +D+A   A   M++ P
Sbjct: 547 GQMDEARRHAGAVMRVHP 564


>gi|322699659|gb|EFY91419.1| pre-mRNA-splicing factor prp1, putative [Metarhizium acridum CQMa
           102]
          Length = 925

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 112/328 (34%), Gaps = 43/328 (13%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-- 151
           SI       AR +++Y  +            L +  A  ER +       E++ Q     
Sbjct: 535 SINRGKYDTARAIYAYAIRVFYNSRT-----LRMAAADLERNHGTKESLWEVLEQAVDAC 589

Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T E     L  E  + G++++A+    +A + +P+   +  A V+         +A   
Sbjct: 590 PTSEDLWMMLAKEKWQAGEVDNARLVLKRAFNKNPNNENIWLAAVKLESENDNAEQARKL 649

Query: 211 LNQKKKNAKE--------------WNRNRAILLIARSLEN---------------ADKGD 241
           L   ++ A                    +A+ L+ ++L+                 D G 
Sbjct: 650 LEIAREQAPTDRVWMKSVVFERVQGQVEKALDLVLQALQLFPAAAKLWMLKGQIYEDLGK 709

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300
              +       +K+   SI   +  A+         KA  +L++     P  P++     
Sbjct: 710 TAQAREAYAAGVKVVPKSIPLWLLYARLEEKSGMIIKARSVLDRARLAVPKSPQLW--CE 767

Query: 301 HLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRK 358
            +  E   G + +A  +  +  +E  +S ++  +    +    Q  +       K+    
Sbjct: 768 SVRLERRAGNMSQAKSIMAKARQEIPKSGLLWVEQIWHLEPRTQRKSLSLEAIKKVDNDP 827

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSAL 386
            +F+ +A+I  A+    +K   W + AL
Sbjct: 828 LLFVGVARIFWADRK-LEKAQNWFEKAL 854


>gi|153803505|ref|ZP_01958091.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124120966|gb|EAY39709.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 389

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 101/342 (29%), Gaps = 65/342 (19%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFEQLIDEPEHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +   Y   +EW +AI       
Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIECATALV 168

Query: 216 KNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  ++    N A      ++      +   +     ++L+     + A+I   K  +   
Sbjct: 169 KLGRKRMKVNIAHFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNE 228

Query: 275 KKRKAEVILEKIWKVNPHPE----------IANIYTHL-LSENTVGKLKRALRLEEINKE 323
             +K    LE + +     +          +A  Y HL   ++ +  L+R +     NK 
Sbjct: 229 DYQKTIDHLEMVLEQ----DIDFIGEVLNTLAECYHHLGREQDLITFLRRCIA----NKA 280

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYW 381
            V + ++++++  +   I  A       +   P  + F  L    I +A        L  
Sbjct: 281 GVSAELMLAQLVAQHEGIAAAQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLST 340

Query: 382 TQSALHAMP--DPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            Q  +       P +       S+    W    P  K     
Sbjct: 341 LQRLVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKNWGSI 380


>gi|167763146|ref|ZP_02435273.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC
           43183]
 gi|167698440|gb|EDS15019.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC
           43183]
          Length = 283

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 47/226 (20%)

Query: 76  LHKRNYDKGYKA---------------LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
             +R Y+K  ++               L    + +      LA+  +S V      + E 
Sbjct: 71  RRQRKYEKALESYNFALNIAPRAVPILLNRATIYMELGRNNLAQADYSLVLDLEKDNEEA 130

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  L+   I + +R Y +A    E +L++  T       L     R G    A R     
Sbjct: 131 L--LMRAYIYMQQRDYKMAKADYERLLKVNPTSYNGRLGLATLEQREGKYEEALRLLNTM 188

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +                                K +N +      A+L +AR+    D  
Sbjct: 189 IA------------------------------AKGENRQLSPSQYAMLYVARAGVEKDLH 218

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  D  E++ L  +     +   +  ++Q KK  A+   EK 
Sbjct: 219 HTDMALVDLEEAISLDSSQPEIYLMRGEIYLAQKKKELAKRDFEKA 264



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 11/160 (6%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK--- 285
           L  R++   ++  +  +      +LKL   +   ++  +     Q ++RK E  LE    
Sbjct: 26  LCDRAVTYTEQDSLPQAETYIRRALKLEPANPHNALLFSNLGTIQRRQRKYEKALESYNF 85

Query: 286 IWKVNPH--PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              + P   P +   A IY  L   N          + ++ K++ E+L++ + I ++   
Sbjct: 86  ALNIAPRAVPILLNRATIYMELGRNNLAQ--ADYSLVLDLEKDNEEALLMRAYIYMQQRD 143

Query: 341 IDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKIL 379
              A A     +K+ P      L LA +EQ      + + 
Sbjct: 144 YKMAKADYERLLKVNPTSYNGRLGLATLEQREGKYEEALR 183


>gi|83589994|ref|YP_430003.1| hypothetical protein Moth_1146 [Moorella thermoacetica ATCC 39073]
 gi|83572908|gb|ABC19460.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 299

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 18/228 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+G+L +A      AL ++P    +       Y   ++W+ A     +  K    +   
Sbjct: 71  LRLGELETALDCYRTALKLAPRNIDILINTGGCYQRLEQWAEAYRCFYRAWK----YQPR 126

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              LL    +          +     ++L L           A +L    +  +A    E
Sbjct: 127 DVDLLNNLGVCLVQLERPEEALDYYRQALALAPAEGEIIGNLAAALARCRRWPEAVTCFE 186

Query: 285 KIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K  ++ P  ++     A      L +  +     A  L  +     +     +   +++G
Sbjct: 187 KALRLLPE-DVSIINNAAACLEALGKCYLAAPLYARALA-LKPGEPQIRQNYAACLMKLG 244

Query: 340 SIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKI-----LYW 381
            +  A       +++ P     + LL  I +A + +T          W
Sbjct: 245 DLATARKIVEGLLRLYPEHRPAWQLLGTIYEA-TGDTGAAAGCYNRAW 291


>gi|225077206|ref|ZP_03720405.1| hypothetical protein NEIFLAOT_02261 [Neisseria flavescens
           NRL30031/H210]
 gi|224951458|gb|EEG32667.1| hypothetical protein NEIFLAOT_02261 [Neisseria flavescens
           NRL30031/H210]
          Length = 402

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 61/185 (32%), Gaps = 18/185 (9%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155
              AR++   + QQ   ++  L      ++     + + A      +L  P T    R  
Sbjct: 70  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVNEKRAR 126

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213
            ++ L       G ++ A++     L +     A    + ++  Y   ++W +AI     
Sbjct: 127 VLFELAQNYQSAGLVDRAEQIF---LGLQEGDMAREARQHLLSIYQQDRDWEKAIEMAQL 183

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSL 270
              + + +    A      +     K +   + +    A+E+ K C     A+I      
Sbjct: 184 LSHDEQTYQFEIAQFYCEIAQAALFKSNFDTARYNIGKALEANKKC---TRANIILGDIE 240

Query: 271 ISQNK 275
             Q  
Sbjct: 241 YRQGN 245


>gi|209522334|ref|ZP_03270955.1| cellulose synthase operon C domain protein [Burkholderia sp. H160]
 gi|209497228|gb|EDZ97462.1| cellulose synthase operon C domain protein [Burkholderia sp. H160]
          Length = 1099

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL SA       L   PD P +  A+ + Y  A +   A+T      +      R 
Sbjct: 262 RQRGDLASAYDVIAPWLAAMPDNPDLQAALGRLYASAGDDRNALTSFRVALQ-----RRP 316

Query: 225 RAILLIARSLENADKGDM-IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             + L+  ++  A        +   A ++L L  N         +   ++ K   A   L
Sbjct: 317 DDLNLLQAAISAAAGSKQFSYAETLAQQALALAPNDPGVLATVGRMYRAEGKLSLASSYL 376

Query: 284 EK 285
           ++
Sbjct: 377 QR 378



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 70/231 (30%), Gaps = 25/231 (10%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------N 217
            + GD   A      A+  +P    +          A + +  +  + ++ +        
Sbjct: 184 QQAGDPARALSLVRGAMSAAPGNTDLLLQYAGILSAAGQQAE-LGTVMRQLQGMQLTPQQ 242

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHD---AIESLKLCDNSIMASICAAKSLISQN 274
             ++N     ++I ++     +GD+ ++Y      + ++    +   A     +   S  
Sbjct: 243 RTDFNDLNIGIVIRQADAVRQRGDLASAYDVIAPWLAAMPDNPDLQAA---LGRLYASAG 299

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVI 330
             R A        +  P  ++  +   + +     +   A  L      +       L  
Sbjct: 300 DDRNALTSFRVALQRRPD-DLNLLQAAISAAAGSKQFSYAETLAQQALALAPNDPGVLAT 358

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
           V ++    G +  A +    ++  A       L+    +  +  T+    W
Sbjct: 359 VGRMYRAEGKLSLASSYLQRSLVAANTP----LMTNTPR--NAGTNVPRGW 403



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 132 AERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           A      A    E  +L  P      +  L     R G + +A+      L   PD    
Sbjct: 39  ARGDLGTARSLFEDALLNKPDDPWLRL-DLARIYVRQGAVANARSMMDGLLATHPDMTDA 97

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             A        ++WS  +  L++         R  A+  +   L    + DM        
Sbjct: 98  LYASALLSAETQDWSTGLAQLDR----IAPAQRTDAMTTLQHRLWVHQQADMATRLAKNG 153

Query: 251 ESLKLCDNSIMASICA----------AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299
           ++ +       A   A          A +        +A  ++       P + ++   Y
Sbjct: 154 QTQQAIATLRAAEPVAGNNPELIGVIAGAYQQAGDPARALSLVRGAMSAAPGNTDLLLQY 213

Query: 300 THLLS 304
             +LS
Sbjct: 214 AGILS 218



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 27/212 (12%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GDL +A+     AL   PD PW+   + + YV     + A + ++       +       
Sbjct: 41  GDLGTARSLFEDALLNKPDDPWLRLDLARIYVRQGAVANARSMMDGLLATHPDMTDALYA 100

Query: 228 LLIARS--------LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             +  +        L   D+    A   DA+ +L+        +  A + L    + ++A
Sbjct: 101 SALLSAETQDWSTGLAQLDRIAP-AQRTDAMTTLQHRLWVHQQADMATR-LAKNGQTQQA 158

Query: 280 EVILEKIWKVNP----HPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
              L       P    +PE+    A  Y      +    L            + + L+  
Sbjct: 159 IATLRAA---EPVAGNNPELIGVIAGAYQQA--GDPARALSLVRGAMSAAPGNTDLLLQY 213

Query: 332 S---KIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +     A +   +     +    M++ P++  
Sbjct: 214 AGILSAAGQQAELGTVMRQLQ-GMQLTPQQRT 244


>gi|319637623|ref|ZP_07992389.1| hypothetical protein HMPREF0604_00012 [Neisseria mucosa C102]
 gi|317400778|gb|EFV81433.1| hypothetical protein HMPREF0604_00012 [Neisseria mucosa C102]
          Length = 389

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 80/248 (32%), Gaps = 33/248 (13%)

Query: 41  PFVILSILYFFLFAWILLFAVSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA 96
            +VIL  +      + + +  +R      L     +            YK+L   L+   
Sbjct: 5   LWVILLPIVLLPVFFAMGWFAARVDMKTVLKQAKSIPAGF--------YKSL-DALVDRN 55

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---- 152
           +     AR++   + QQ   ++  L      ++     + + A      +L  P T    
Sbjct: 56  SG--RAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVNEK 110

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITF 210
           R   ++ L       G ++ A++     L +     A    + ++  Y   ++W +AI  
Sbjct: 111 RARVLFELAQNYQSAGLVDRAEQIF---LGLQEGDMAREARQHLLSIYQQDRDWEKAIEM 167

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAA 267
                 + + +    A      +     K +   + +    A+E+ K C     A+I   
Sbjct: 168 AQLLSHDEQTYQFEIAQFYCEIAQAALFKSNFDTARYNIGKALEANKKC---TRANIILG 224

Query: 268 KSLISQNK 275
                Q  
Sbjct: 225 DIEYRQGN 232


>gi|157812770|gb|ABV81130.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Speleonectes
           tulumensis]
          Length = 286

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVSEAEECYNTALRLCPTHADSLNNL--ANIRREQGYIEDATRFYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGAMQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + S A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIRR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEDATRFYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G ++   R  +IN    ++   ++ +  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGAMQCYTRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 55/178 (30%), Gaps = 11/178 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G ++ A+     AL + P        +            A  F  +  +   
Sbjct: 26  LANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIRREQGYIEDATRFYLKALEVFP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E+    A      +     +G +  +     E++++      A      +L      + A
Sbjct: 86  EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGA 141

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                +  ++NP     H  +A++  H  S N    ++      ++  +  ++   ++
Sbjct: 142 MQCYTRAIQINPAFADAHSNLASV--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197


>gi|326482418|gb|EGE06428.1| pre-mRNA-splicing factor clf1 [Trichophyton equinum CBS 127.97]
          Length = 675

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183
           ++Y  A    +  L   P ++  A+ S Y    +  GD         +  +    + +  
Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237
           +P    +   + +    + +  R      +        +  + W R   + +     E  
Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376

Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +  D   +     E LKL            +  A+  I Q     A   L +   + P  
Sbjct: 377 ENEDAERARQIYTECLKLIPHKKFTFAKIWLMKAEFEIRQLDLVLARKTLGQAIGMCPKD 436

Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           ++   Y  +     E +  + K   +  + N    ES +  +++   +  +++A A   L
Sbjct: 437 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 495

Query: 351 AM 352
            +
Sbjct: 496 GI 497


>gi|237747600|ref|ZP_04578080.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
 gi|229378962|gb|EEO29053.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
          Length = 605

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 20/269 (7%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +  L+    +   +     N  L       +L   IA        A +   MM     T+
Sbjct: 48  DDLLSADEQAANLKSDLLPNIPLSNDLLYQILSADIAEQRGFEVYAFDT--MMDAAKETK 105

Query: 154 --EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
               A  +  +  ++ + GD   A R   K   ++P +       +   V+  +      
Sbjct: 106 DPRLARRAAEIAVKARKAGDALDATRLWHK---LAPQSVEAERFFLGFLVVENKLGEVRD 162

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-IMASICAAK 268
               +   A    R     L  +  +        A+    +E + L     + A+  +  
Sbjct: 163 VFASRLAKASPAERP---ALFYQFQQILSGTRDKAAAFSVMEDV-LKPYLDMPAAHISLS 218

Query: 269 -SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
            S    N   +A+   +K   + P  E A +     S ++   ++      E    + E 
Sbjct: 219 VSAFLNNDSVRAKEEAQKALALKPDSETAVLALAQASSDSNEAIEILSGFLEKYPNAREV 278

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +  +++ ++    D+A  +        P
Sbjct: 279 RIAAARLMIKQKQYDKAKKEFEKIRLSQP 307


>gi|296127464|ref|YP_003634716.1| TPR domain-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019280|gb|ADG72517.1| TPR domain-containing protein [Brachyspira murdochii DSM 12563]
          Length = 645

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 92/300 (30%), Gaps = 46/300 (15%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           N  +A  + S   + H+ +   L   L   I L   + + A      +  + +    A Y
Sbjct: 77  NFSMAETLISDAERYHSRNYRLLERKLT--IELLNNRNSEARTTANTIKNLDSKNYLASY 134

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +    S R G   +A     +A  I    P  T A+   Y+       A+   N+   N 
Sbjct: 135 AEGVLSERAGYYKTAMSMYERARVIDRVRPEATTALAYLYLAIGSNETALNLFNENMTNN 194

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                +   L   R L         A+ ++   +L    N   A I  A  LIS N+  +
Sbjct: 195 PRMAESYYHLANYRYLNK----QYNAALNEVNNALFYYTNYSDAEILKANILISLNRYDE 250

Query: 279 AEVILEKIWKVNPHPE-----------IANI----------------YTHLLSENTVGKL 311
           A  ILE +      P+           I ++                Y     E+ +G+L
Sbjct: 251 AIAILEYM------PDTSFRNNYKYYYIGSVYEGADNYVRAKGAYINYLKAKPEDELGRL 304

Query: 312 KRALRLEEIN--KESVESLVIVSKIALEM-----GSIDQAHAKAMLAMKIAPRKEIFLLL 364
                L   N   +       +    L           +A A     +++ P      L+
Sbjct: 305 AYERVLIHTNPTPDYERDRAALYYGNLASYYTRLADNVRAQAYLKHMLRLNPANTYARLM 364


>gi|298492037|ref|YP_003722214.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
 gi|298233955|gb|ADI65091.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 374

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 12/164 (7%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  +    G   +A     +AL  +P        +       +    AI       + A
Sbjct: 138 GLALQKQ--GQKEAAIAAYRQALAANPKMAAAQYNLGVILYEEERCQEAI----AAYQEA 191

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              +RN A      ++    +G +  +     + LKL   + +A       ++ Q +  +
Sbjct: 192 INLDRNNANAYFNLAIALQQEGQLEQAIATYRQILKLNPENTVAYNNLGSLMVIQGQPSE 251

Query: 279 AEVILEKIWKVNPHPEIA------NIYTHLLSENTVGKLKRALR 316
           A  I +K    NP   +A       +Y     +     LKRA +
Sbjct: 252 AIAIYQKAIGQNPKNALAYYNLGVTLYNQGNLKEANAALKRARQ 295


>gi|239817417|ref|YP_002946327.1| hypothetical protein Vapar_4450 [Variovorax paradoxus S110]
 gi|239803994|gb|ACS21061.1| Tetratricopeptide domain protein [Variovorax paradoxus S110]
          Length = 311

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/150 (10%), Positives = 42/150 (28%), Gaps = 6/150 (4%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L         Q   + +    ++  P         L   +    +   A     +A   +
Sbjct: 106 LRADALRQTEQAAQSEKAYRRLMGTP-LEGAGYRGLGLLAGARSNYAEAVLLLKQAQRHA 164

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    +   +    + +     A   L Q  +   +  + +A L +       +  +   
Sbjct: 165 PTDALLLSDLGYAQLRSGSTDEARLPLMQALQLRPDSAQAQANLALY-----LELTNQQE 219

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQN 274
                +++ ++   +  A   AA+ L    
Sbjct: 220 QAAAMMDANRMSPAARSAVKEAAQQLRRGG 249


>gi|15639635|ref|NP_219085.1| hypothetical protein TP0648 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025873|ref|YP_001933645.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum
           SS14]
 gi|3322946|gb|AAC65621.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018448|gb|ACD71066.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 682

 Score = 44.9 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 87/278 (31%), Gaps = 24/278 (8%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +    +  AR +   +  ++    +    L   +I +++ + + A    +  L+  A   
Sbjct: 124 VGQGELDQARSLFEEILARYPNDVDARFGL--AEIEVSKGRLSSARLLYQAALERQAENR 181

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+ SL   S   G    A  Y  +AL    D   V         L   +  A  +L + 
Sbjct: 182 KALLSLALISYEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERA 241

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                 + R RA+L    S     +G    +     + ++     + A      SL+   
Sbjct: 242 LHIKSAYPRARALL----SAVLYARGAYERAVAQCDQRIRADRTQVDAWYVKTLSLLKLG 297

Query: 275 KKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENTVGKLKRALRLEEINKESVESL 328
           K  +A    +    V+P  ++           HL  E+        ++L   + +  +  
Sbjct: 298 KHTEALATAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYR-----MQLARFHTQKADG- 351

Query: 329 VIVSKIALEMGSIDQAHAKAM----LAMKIAPRKEIFL 362
              ++  +   ++D+                    + L
Sbjct: 352 --FARRNMSRQALDEYRRALKVYPYDGAAREAYARLLL 387



 Score = 43.8 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 37/251 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             + A  +  ++ A E  +  L+  A+   A   L      +G+ + A  +  KA  +  
Sbjct: 51  AGRKAHVQEDWHAAIEFYQEALKKNASYNLAYRGLAECFYALGEYDQALHHVRKAQKLM- 109

Query: 186 DAPWVTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                 +  +++          E  +A +   +           R       +     KG
Sbjct: 110 ----AQDLSLEKLCAFSLVGQGELDQARSLFEEILARYPNDVDAR----FGLAEIEVSKG 161

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---- 296
            + ++      +L+    +  A +  A          +A   +E+   +  H + A    
Sbjct: 162 RLSSARLLYQAALERQAENRKALLSLALISYEAGHYPRALTYVERA--LQYHGDNAQVHF 219

Query: 297 -NIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEM-----GSIDQAHAK 347
              Y   L    E+    L+RAL         ++S    ++  L       G+ ++A A+
Sbjct: 220 FAAYLATLRAHYEDAERYLERAL--------HIKSAYPRARALLSAVLYARGAYERAVAQ 271

Query: 348 AMLAMKIAPRK 358
               ++    +
Sbjct: 272 CDQRIRADRTQ 282



 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 93/278 (33%), Gaps = 28/278 (10%)

Query: 84  GYKALYTGLMSIAAHNIPL--ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
            Y+ L     ++  ++  L   RK    ++Q  +         L     + + + + A  
Sbjct: 81  AYRGLAECFYALGEYDQALHHVRKAQKLMAQDLSLEK------LCAFSLVGQGELDQARS 134

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-- 199
             E +L        A + L       G L+SA+     AL+         +A++   +  
Sbjct: 135 LFEEILARYPNDVDARFGLAEIEVSKGRLSSARLLYQAALE---RQAENRKALLSLALIS 191

Query: 200 -LAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             A  + RA+T++ +  + +      +     +A    + +  +        I+S     
Sbjct: 192 YEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERALHIKSAYPRA 251

Query: 258 NSIMASICAAKSLISQ-----NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            ++++++  A+    +     +++ +A+      W V          + L        L 
Sbjct: 252 RALLSAVLYARGAYERAVAQCDQRIRADRTQVDAWYV-------KTLSLLKLGKHTEALA 304

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSI-DQAHAKAM 349
            A     ++       +++ +IA+      D+   +  
Sbjct: 305 TAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYRMQLA 342


>gi|326476411|gb|EGE00421.1| pre-mRNA splicing factor CLF1 [Trichophyton tonsurans CBS 112818]
          Length = 547

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183
           ++Y  A    +  L   P ++  A+ S Y    +  GD         +  +    + +  
Sbjct: 129 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 188

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237
           +P    +   + +    + +  R      +        +  + W R   + +     E  
Sbjct: 189 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 248

Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +  D   +     E LKL            +  A+  I Q     A   L +   + P  
Sbjct: 249 ENEDAERARQIYTECLKLIPHKKFTFAKIWLMKAEFEIRQLDLVLARKTLGQAIGMCPKD 308

Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           ++   Y  +     E +  + K   +  + N    ES +  +++   +  +++A A   L
Sbjct: 309 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 367

Query: 351 AM 352
            +
Sbjct: 368 GI 369


>gi|307105124|gb|EFN53375.1| hypothetical protein CHLNCDRAFT_25984 [Chlorella variabilis]
          Length = 471

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 64/229 (27%), Gaps = 7/229 (3%)

Query: 59  FAVSRFFLSCPAMLFHMLHKRNY---DKGYKALYTG--LMSIAAHNIPLARKMHSYVSQQ 113
            AV    + C         +       +   AL+    LM     +  L R +       
Sbjct: 165 LAVLAAEMDCVEEARKWFREGTRTVKGRASHALWQAWALMEQKQGDRDLVRALLK--RGL 222

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                    +L        E     A    +   ++       + +        G+   A
Sbjct: 223 EVSPRSRYTHLSWALWEKEEGNVEEARRLFKRGSELNPRDAAILQAWARMEEEQGEAEEA 282

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           +R   +A  + P   +V +A          +  A     Q    A   + + +++  A +
Sbjct: 283 RRLFKRASRVDPKHLYVWQAWGCLEYRQHNYDTARELFQQGIWAAPPRDPSVSLVFQAWA 342

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +   D G+   +      ++K    S  + +  A+         +A  +
Sbjct: 343 MLERDAGNTQLARELLKCAVKADPRSEPSWLVWAEMEEDLGFLERAAEL 391


>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
           PCC 7424]
 gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
           PCC 7424]
          Length = 730

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 79/242 (32%), Gaps = 16/242 (6%)

Query: 96  AAHNIPLARK-----MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
              +   A K     + +Y        N +  ++   ++     + + A    E ++   
Sbjct: 400 GKGDALQALKRYQNALEAYDEAIQLQPNYWQAWMERAEVLEKLGKNSEAIYSYEKVIDFT 459

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-EAVVQQYVLAKEWSRAIT 209
                A  +L     ++ D  +A     K+L I+PD  W   +       L   +  AI 
Sbjct: 460 PNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLK-NYEEAIK 518

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  K    +++        +     +      +     ++++   +   A      +
Sbjct: 519 SYEKAVKINPSFSQ----AWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIA 574

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK----LKRALRLEEINKESV 325
           L   N+ R+A    E+  ++ P+      Y    +  T+ +    ++       +N ++ 
Sbjct: 575 LNRLNRYREALKAFEEGTQIQPN-SFEAWYQKAWTLQTLNRYGEAVEAYNTATRLNPKNP 633

Query: 326 ES 327
           ++
Sbjct: 634 QA 635


>gi|157812762|gb|ABV81126.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Mastigoproctus
           giganteus]
          Length = 290

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GLVQEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ ISP        +        +   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAISSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A +    A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAISSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 15/168 (8%)

Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A +    AL + P        +            A     +  +   E+    A   
Sbjct: 36  VQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAH 91

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +     +G +  +     E++++      A      +L      + A     +  ++
Sbjct: 92  SNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQI 151

Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           NP     H  +A+I  H  S N    +       ++  +  ++   ++
Sbjct: 152 NPAFADAHSNLASI--HKDSGNIPEAISSYRTALKLKPDFPDAYCNLA 197


>gi|158522481|ref|YP_001530351.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511307|gb|ABW68274.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 581

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 5/176 (2%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           Y  +    E  +++     FA+  L       G  + A+ +  KAL + P +P     + 
Sbjct: 410 YRNSITIFEQAVKVTGRNFFALTGLGNAYAEQGRPDKAEVFFKKALLLQPGSPGAHANLG 469

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                     +A T           +    A   +         G   A+     ++L  
Sbjct: 470 LVAAAQGAEQKAKTHFTAALAVDPFF----APAHVGMGNLLLAAGRPEAAIFHYQQALAT 525

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK 310
             + + A    A +L +     KA   L K     PH PE+      LL+     +
Sbjct: 526 DPDLVSAHNNLALALAASGATDKALNHLHKTIPRFPHRPELRRTLARLLARTGARR 581


>gi|16264266|ref|NP_437058.1| adenylate cyclase protein [Sinorhizobium meliloti 1021]
 gi|15140391|emb|CAC48918.1| probable adenylate cyclase protein [Sinorhizobium meliloti 1021]
          Length = 624

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 14/148 (9%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    +  L  + +     +  +  +++ L  +   A    A++  +Q K  +A    ++
Sbjct: 420 AEAHASLGLALSLRERHSEAMAEFDQAITLDPDLFEAHYFYARACFTQGKLDEAARHFQR 479

Query: 286 IWKVNPHPE-------IANIYTHLLSE---NTVGK--LKRALRLEEINKESVESLVIVSK 333
              +   P+       + N+   L  E   NT  +  + RA R   +  E+     + + 
Sbjct: 480 AADIK--PDDYQALLVLINVLRSLGREQEMNTAAREGVARAERELMMRPENPRPAYLGAV 537

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               +G +D+A   A  A+   P   + 
Sbjct: 538 GLAALGELDRAKEWAGRALATDPDDRLA 565


>gi|332531337|ref|ZP_08407245.1| HemY domain protein [Hylemonella gracilis ATCC 19624]
 gi|332039201|gb|EGI75619.1| HemY domain protein [Hylemonella gracilis ATCC 19624]
          Length = 470

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 77/313 (24%), Gaps = 36/313 (11%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M  L+   F+ +L + + + ++     V+I W       S       L         L  
Sbjct: 1   MRSLVWLLFLFALAVGAALFLADNTGLVTIFWPPYRLDVSANFAALALLVSFLVLHALLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV--------SQ 112
                L  P        +       + L   +    A      RK    V          
Sbjct: 61  GLSLLLGMPERARLWRRRHQERVQQQGLLDAMAHWTAGRYLRGRKAAENVVEQTQSLMRN 120

Query: 113 QHTFHNE----YLVYLLE----------------VQIA------LAERQYNIAHEKLEMM 146
           +           L +LL                  Q A            +        M
Sbjct: 121 EQALPQSIRTVALAHLLAAECAHALQDRPRRDEHAQAALDAVAGELAGAGDSVKRGAVRM 180

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                 R+     +   +    D  +A R   +               ++   +A +   
Sbjct: 181 RDAQEVRDGVQLRMARWAYEDRDAQAALRRVDELPQGVARRLAALRLRLRVTRMAGKPLA 240

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+  L    K+    +    +++     E        A    A ESL+  +  +  +   
Sbjct: 241 ALETLRLLSKHRAFSDTATQVIVRGLVTEVLRDAHDQAQLLQAWESLEPAERDLPEAALQ 300

Query: 267 A--KSLISQNKKR 277
           A  + L   N+ R
Sbjct: 301 AGERMLALSNQGR 313


>gi|326201126|ref|ZP_08190998.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325988694|gb|EGD49518.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 292

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 4/158 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E    +L+I      A Y L        + + A     KA++I+PD       
Sbjct: 43  GKQQDAVETYRKVLEINPCEARAHYGLAIIYDDRKEFDKAIEMYQKAIEINPDYTKAYFF 102

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +            A     +K    + ++          +    + G    +     + L
Sbjct: 103 LANSCDEGGRKEEA-AEYYEKAAELEPYHFW---AYNNLAAVYEEMGKYDKALIAIRKGL 158

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +L  N   A   A   +      +KA        + NP
Sbjct: 159 RLEPNHFKALFNAGVIMNRLGYTQKAVEYYNTSIEKNP 196



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 40/116 (34%), Gaps = 4/116 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A  Y  KA ++ P   W    +   Y    ++ +A+  + +  +   E N  +A+
Sbjct: 111 GRKEEAAEYYEKAAELEPYHFWAYNNLAAVYEEMGKYDKALIAIRKGLR--LEPNHFKAL 168

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 +     G    +      S++       + +  +   + ++   KA  ++
Sbjct: 169 FNAGVIMNRL--GYTQKAVEYYNTSIEKNPRYPYSYLNLSLIFMEEHDVSKAIEVI 222


>gi|170063159|ref|XP_001866982.1| pre-mRNA-splicing factor prp1 [Culex quinquefasciatus]
 gi|167880889|gb|EDS44272.1| pre-mRNA-splicing factor prp1 [Culex quinquefasciatus]
          Length = 931

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 64/164 (39%), Gaps = 19/164 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLEAILQKAVAHCPKSEVLWLMG-AKSKWMAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +L+N +    
Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALDNLE---- 682

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            A+     +++K+  +        AK  + + +  + + +L++ 
Sbjct: 683 -AALSLLEDAVKVFPDF-------AKLWMMKGQIEEQKKLLDRA 718



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 21/211 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P+ P    A  +   +  +   A   + +  +          
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEVNPLSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKGVIAQAARHIPTSVRIWIKAADLETEAKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      +   E+    L RA+        SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVEIENPEDAKILLSRAVECCNT---SVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHN 374
                 A +  P    I+   A++E+AN +N
Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGNN 470


>gi|148240556|ref|YP_001225943.1| TPR repeat-containing glycosyl transferase [Synechococcus sp. WH
           7803]
 gi|147849095|emb|CAK24646.1| Glycosyltransferase of family GT2; modular; contains a TPR-repeat
           domain [Synechococcus sp. WH 7803]
          Length = 402

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 18/202 (8%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKE 220
           R       ++   + L+  P  P+    +    V +    R +  L Q  +       + 
Sbjct: 178 RRDKAERLRQSMEQWLEDQPGDPYACTKLGALEVSSGNHERGVNLLRQGLEQLPDGAGRT 237

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKR 277
             R   +L +  +L   D       Y  A++    ++L      A +  A  L+  N+  
Sbjct: 238 AERYELLLNLGIALAPEDAVAAEGFYRQALDLPLDVRLSLG---ARLNLAALLMQANQLD 294

Query: 278 KAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A  +     +    PE+A  + +L        +    L+   R  E+N +  ES    +
Sbjct: 295 EAIQLTTTACQRA--PEVALAWYNLGLMERRRGDLAASLRAYERSLELNPDHAESHQNFA 352

Query: 333 KIALEMGSIDQAHAKAMLAMKI 354
              L  G ID A A    A+  
Sbjct: 353 VARLIGGDIDGARASFRAAIDK 374


>gi|320538440|ref|ZP_08038307.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320144702|gb|EFW36451.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 674

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 63/160 (39%), Gaps = 9/160 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             ++W  AI F  +  K    +N    ++    +      G+   +  +  ++ K   N+
Sbjct: 48  AKEDWYTAIEFYQEALKKNASYN----LVYQGMAECFYALGEYEETLKNIKKAQKFMPNN 103

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
                    +LI   K   A+ +  ++ K  P+ ++ + +     +   G+L  A  L +
Sbjct: 104 AELQNIEGFALIGLGKVGDAKKVFAEVLKTYPN-DLDSRFGMAEIDVVAGRLTAASMLYK 162

Query: 320 IN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                  E+ ++L+ ++ I+ E G+   A    + A++  
Sbjct: 163 AALERQTENRKALLSLALISYETGNKQAAETYILQALRYH 202



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 14/166 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMML---QIPAT 152
           A  +  A  ++    ++ T + + L+ L    I+        A   + + +      P  
Sbjct: 151 AGRLTAASMLYKAALERQTENRKALLSL--ALISYETGNKQAAETYILQALRYHGDYPQV 208

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             FA    Y  +   G  + AQ     AL I P     +E +        ++ + I   +
Sbjct: 209 HFFAA---YLTAL-DGKYSEAQVRLETALKIQPHYKEASELLASILYAQGKYQKVIDICD 264

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           Q       ++RN+A     ++L     G    +   A   L +  +
Sbjct: 265 Q----LIAYDRNQAHAWYVKTLSLLKLGKNSEALQTAKLGLSVEPD 306



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 2/141 (1%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G   I    +  A+K+ + V    T+ N+        +I +   +   A    +  L+ 
Sbjct: 110 EGFALIGLGKVGDAKKVFAEV--LKTYPNDLDSRFGMAEIDVVAGRLTAASMLYKAALER 167

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A+ SL   S   G+  +A+ Y  +AL    D P V         L  ++S A  
Sbjct: 168 QTENRKALLSLALISYETGNKQAAETYILQALRYHGDYPQVHFFAAYLTALDGKYSEAQV 227

Query: 210 FLNQKKKNAKEWNRNRAILLI 230
            L    K    +     +L  
Sbjct: 228 RLETALKIQPHYKEASELLAS 248


>gi|125543580|gb|EAY89719.1| hypothetical protein OsI_11257 [Oryza sativa Indica Group]
          Length = 620

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 10/188 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  +   A++   KA+  SP   +                +A   L    K     N  
Sbjct: 284 IRAENNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLL----KIGHAVNPR 339

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             ++L + +L   +      +     ++ ++        I        +   R A  + +
Sbjct: 340 DPVILQSLALLEYNYSSPNTARVLFRKASQIDPRHQPVWIAWGWMEWKEGNARTARTLYQ 399

Query: 285 KIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESLVIVSKIALEM 338
           +   VN   E A          E   G    A RL      IN +S  + +  + +  E 
Sbjct: 400 RALSVNSTNECAARCLQAWGVLEQRAGNYTAARRLLRSSLNINSQSEVTWMTWAALEDEQ 459

Query: 339 GSIDQAHA 346
           G   +A  
Sbjct: 460 GDPVRAEE 467



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 11/213 (5%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W   AV++         RA    +         +          ++    +G++  + + 
Sbjct: 174 WQCWAVLEHK--GGNIRRARELFDAA----TVADAKHIAAWHGWAILEIKQGNIKKARNL 227

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSE 305
             + LK C  +       A       +  +A  + ++  + NP      +A     + +E
Sbjct: 228 LAKGLKYCGGNEYIYQTLALLEARAERFEQARTLFQQATQCNPKSCASWLAWAQVEIRAE 287

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           N     K   +  + + ++  S  + +    E GSID+A     +   + PR  + L   
Sbjct: 288 NNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLLKIGHAVNPRDPVILQSL 347

Query: 366 QIEQANSHNTDKILYWTQSAL--HAMPDPLWIS 396
            + + N  + +      + A        P+WI+
Sbjct: 348 ALLEYNYSSPNTARVLFRKASQIDPRHQPVWIA 380


>gi|323466654|gb|ADX70341.1| Putative O-linked transferase [Lactobacillus helveticus H10]
          Length = 415

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 32/264 (12%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172
           F  E L  +   +I L +   +     L ++  +       +  L  ++      G + +
Sbjct: 62  FPQEDLFKVYLAEIMLNDGDEDD---GLSLLYGVSKKSSAYLDGLLVQADYYQTNGLIET 118

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229
           A+    +AL ++P    +   + +   L+  + +A+     L Q++K   E N N+ ++ 
Sbjct: 119 AKDKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKTFGEVNLNQRLIA 178

Query: 230 IARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               L N +    I   H +    I+S K     +M ++             +A  +L++
Sbjct: 179 TNAKLGNYEAAAKIIREHSSSLLDIDS-KYEAGLVMLAV---------GDDDQAIKLLDE 228

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMG 339
           +   +P     +P +A  Y H    +    L+        N E  E+L  + ++ A  + 
Sbjct: 229 VIDQSPDYVNAYPLLAQAYEH--KHDNEQVLRTVQAGLAYN-ELDETLYSMGARAAANLN 285

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363
            +D A       +K AP      +
Sbjct: 286 QLDTAADLLEKGLKKAPDNSELRM 309



 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 21/194 (10%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +        E  +     ++      Y  A    E ++Q   T     +     + R
Sbjct: 121 DKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKT-----FGEVNLNQR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---------LAKEWSRAITFLNQKKKN 217
           +   N+       A  I  +      +++                +  +AI  L++    
Sbjct: 176 LIATNAKLGNYEAAAKIIREHS---SSLLDIDSKYEAGLVMLAVGDDDQAIKLLDEVIDQ 232

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           + ++     +L  A      D   ++ +    +   +L +         A++  + N+  
Sbjct: 233 SPDYVNAYPLLAQAYE-HKHDNEQVLRTVQAGLAYNELDETLYS---MGARAAANLNQLD 288

Query: 278 KAEVILEKIWKVNP 291
            A  +LEK  K  P
Sbjct: 289 TAADLLEKGLKKAP 302


>gi|254415849|ref|ZP_05029606.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196177276|gb|EDX72283.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 383

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 13/128 (10%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + SL       G+   A    T+AL +SP+ P         YV  + +  AI  LNQ  +
Sbjct: 238 LISLAGIKTEKGNYQEAIADLTQALRLSPNNPEAYYRRGNAYVELENYQAAIEDLNQVLR 297

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-- 274
              +     A+   +R     + GD   +  D  +++KL           A +   Q   
Sbjct: 298 LNPD----NAVAYFSRGYSRDELGDYQGAIADYNQAIKLNPEY-------ADAYYDQALE 346

Query: 275 KKRKAEVI 282
             RKA  I
Sbjct: 347 DFRKAAEI 354


>gi|162455198|ref|YP_001617565.1| TPR domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161165780|emb|CAN97085.1| TPR domain protein [Sorangium cellulosum 'So ce 56']
          Length = 686

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 78/227 (34%), Gaps = 25/227 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIPATREF 155
            ++  A   +           E    LL+   ++A    +   A        + P +   
Sbjct: 119 GDLDAAAACYERAR-----DLEP--GLLQAVERLASLRGRRGAAAGVGPAATRGPESSLS 171

Query: 156 AVYSL--YFESCRIGDL--NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           A  +L    E+ R+G    ++A  Y   AL ++P       A+   +  A  +  AI  L
Sbjct: 172 APDALAALGETLRLGGRSDDAAVWY-RVALKLNPRMANAYTALGAIHADAGRFDEAIDDL 230

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +  + ++  R  L  A      + G +  S     E++ LC +   A+  A   L 
Sbjct: 231 RRALEIDRNFHVARDYLAAALG----ESGLLDESQAMYREAVALCPD-DPAAHSA--LLF 283

Query: 272 SQ---NKKRKAEVILEK-IWKVNPHPEIANIYTHLLSENTVGKLKRA 314
           +        +++++ E   W       +A       ++ +  +  R 
Sbjct: 284 NMPFWPNVTESDILAEARAWNARHARPLAAQAAPHTTDRSSDRRLRI 330


>gi|161507462|ref|YP_001577416.1| putative O-linked transferase [Lactobacillus helveticus DPC 4571]
 gi|160348451|gb|ABX27125.1| putative O-linked transferase [Lactobacillus helveticus DPC 4571]
          Length = 415

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 32/264 (12%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172
           F  E L  +   +I L +   +     L ++  +       +  L  ++      G + +
Sbjct: 62  FPQEDLFKVYLAEIMLNDGDEDD---GLSLLYGVSKESSAYLDGLLVQADYYQTNGLIET 118

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229
           A+    +AL ++P    +   + +   L+  + +A+     L Q++K   E N N+ ++ 
Sbjct: 119 AKDKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKTFGEVNLNQRLIA 178

Query: 230 IARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               L N +    I   H +    I+S K     +M ++             +A  +L++
Sbjct: 179 TNAKLGNYEAAAKIIREHSSSLLDIDS-KYEAGLVMLAV---------GDDDQAIKLLDE 228

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMG 339
           +   +P     +P +A  Y H    +    L+        N E  E+L  + ++ A  + 
Sbjct: 229 VIDQSPDYVNAYPLLAQAYEH--KHDNEQVLRTVQAGLAYN-ELDETLYSMGARAAANLN 285

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363
            +D A       +K AP      +
Sbjct: 286 QLDTAADLLEKGLKKAPDNSELRM 309



 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 21/194 (10%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +        E  +     ++      Y  A    E ++Q   T     +     + R
Sbjct: 121 DKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKT-----FGEVNLNQR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---------LAKEWSRAITFLNQKKKN 217
           +   N+       A  I  +      +++                +  +AI  L++    
Sbjct: 176 LIATNAKLGNYEAAAKIIREHS---SSLLDIDSKYEAGLVMLAVGDDDQAIKLLDEVIDQ 232

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           + ++     +L  A      D   ++ +    +   +L +         A++  + N+  
Sbjct: 233 SPDYVNAYPLLAQAYE-HKHDNEQVLRTVQAGLAYNELDETLYS---MGARAAANLNQLD 288

Query: 278 KAEVILEKIWKVNP 291
            A  +LEK  K  P
Sbjct: 289 TAADLLEKGLKKAP 302


>gi|117923677|ref|YP_864294.1| hypothetical protein Mmc1_0362 [Magnetococcus sp. MC-1]
 gi|117607433|gb|ABK42888.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 804

 Score = 44.9 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/249 (10%), Positives = 78/249 (31%), Gaps = 37/249 (14%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDI 183
           L+ ++ +A  +   A        +           L     +  G  + A++   +A+ +
Sbjct: 367 LQGRLLVAMGKRERAEWVFWESTRRFPDNSLNYTELGQLLLKQPGREDEAEQILREAMAL 426

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             +       + + Y+   +   A   L    +     + N   +          +G + 
Sbjct: 427 DSNNIPPRTELGRLYMQQGKLEEAEQVL----REVIGLDSNDIHVRTELGRLYMQQGKLE 482

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +     E++ L  N+I       +  + Q K ++AE +L++                  
Sbjct: 483 EAEQVLQEAMALDSNNIPPRTELGRLYMQQGKLKEAEQVLQEA----------------- 525

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL- 362
                           ++  ++     + ++ ++ G  ++A       + I     +   
Sbjct: 526 --------------MALDSNNIPPRTELGRLYMQQGKREEARWVLEQVLDIESEDHVARG 571

Query: 363 LLAQIEQAN 371
           LL+++E+  
Sbjct: 572 LLSRLERGE 580



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 78/238 (32%), Gaps = 38/238 (15%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQH---TFHNEYLVYLLEVQIALAERQYNIAHEKL-EM 145
            G + +A      A  +    +++    + +   L  LL  Q      + + A + L E 
Sbjct: 368 QGRLLVAMGKRERAEWVFWESTRRFPDNSLNYTELGQLLLKQ----PGREDEAEQILREA 423

Query: 146 MLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           M        P T    +Y       + G L  A++   + + +  +   V   + + Y+ 
Sbjct: 424 MALDSNNIPPRTELGRLY------MQQGKLEEAEQVLREVIGLDSNDIHVRTELGRLYMQ 477

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   A   L +           R             +G +  +     E++ L  N+I
Sbjct: 478 QGKLEEAEQVLQEAMALDSNNIPPR----TELGRLYMQQGKLKEAEQVLQEAMALDSNNI 533

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK--LKRALR 316
                  +  + Q K+ +A  +LE++               + SE+ V +  L R  R
Sbjct: 534 PPRTELGRLYMQQGKREEARWVLEQV-------------LDIESEDHVARGLLSRLER 578


>gi|194364346|ref|YP_002026956.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3]
 gi|194347150|gb|ACF50273.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3]
          Length = 940

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 11/105 (10%)

Query: 164 SCRIGDLNSAQRYATKALDISPDA-PWV--TEAVVQQYVLAKEWSRAITF--------LN 212
           +   G +  A   A +A    P    W     A ++     ++   AI+         + 
Sbjct: 150 AYDAGQMGIAASKAEQAFRQQPKQGAWALLWVAALEAQQQPEQADVAISTALQLGAPNVE 209

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           + +       R RA+LL  ++  +   GD  A+   A +++KL  
Sbjct: 210 ELRARRVVLTRQRALLLAQQAYRSLSAGDDAAAIGHARDAVKLAP 254


>gi|254522146|ref|ZP_05134201.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp.
           SKA14]
 gi|219719737|gb|EED38262.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp.
           SKA14]
          Length = 890

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 6/99 (6%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +R RA     R L+   +     +     E+LKL  +   A+         Q + 
Sbjct: 767 AGPASDRQRAQQANDRGLQLYREKQYDEAAAQFTEALKLRPDFAQAANNLGFVYYRQQRY 826

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310
            +A   LE   K++P     H  + + Y +   +    +
Sbjct: 827 AEAARWLENTLKIDPSRAVAHLNLGDAYFNA-GDKPKAR 864



 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 6/113 (5%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  +  R    + A    T+AL + PD       +   Y   + ++ A  +L    K 
Sbjct: 782 RGL--QLYREKQYDEAAAQFTEALKLRPDFAQAANNLGFVYYRQQRYAEAARWLENTLKI 839

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                 +RA+  +       + GD   +       L L      A+   A+  
Sbjct: 840 DP----SRAVAHLNLGDAYFNAGDKPKARQAYTTYLALQPQGSGAAQARAQLE 888


>gi|254169261|ref|ZP_04876094.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei
           T469]
 gi|197621798|gb|EDY34380.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei
           T469]
          Length = 465

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 24/219 (10%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
              ++ T   +Y   L + +  +   + + A                 +  +        
Sbjct: 7   RKKKESTIVRDYAKTLEDAKALMNSGEDDRAQ--------------ILLRRINRWVSEDF 52

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  SA     K   +S       E ++       ++  AI  L + K  + + N  RA L
Sbjct: 53  DRVSALSPNEK-KTLSKILTEAGEKMLVLK----DYEYAIKTLEKAK--SLDRNNVRAWL 105

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I R+L       +  +     E++KL  N++ A+I    +L  + + + A     +  +
Sbjct: 106 DIGRNL-LERNVQIPYAVASLKEAVKLAPNNVEANILLGDALRMEGELKNALKAYFRALE 164

Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           ++P + ++ N    +  +N V  LK+   L +      E
Sbjct: 165 IDPENEDVINKILKIEPDN-VEVLKKYAELLKKKGNYNE 202


>gi|223940068|ref|ZP_03631932.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223891253|gb|EEF57750.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 478

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 83/256 (32%), Gaps = 38/256 (14%)

Query: 165 CRIGDLNSAQRYATKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +G L+ A     K +D+ PD   +   A      L  +   A   +    +     + 
Sbjct: 181 MEMGRLDEAIEVYQKMIDLRPDLHSYARVA--HVRWLKGDLQGATEVMQMAVQATSPKDA 238

Query: 224 NRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             A  +    +      G++  +   +  +L+   +   A +   + L++ +++ +A   
Sbjct: 239 ETAAWVYSRMANYQLQAGNIDNALKHSEAALEFQKDYAPALLAKGRLLLADHREEEAIEP 298

Query: 283 LEKIWKVNPHPE----IANI-----------------------------YTHLLSENTVG 309
           L +   +NP P+    +A                               Y     ++   
Sbjct: 299 LRRAVALNPLPDYQWTLAEALRATGKPDAALENQIKQMGPASDPRTASLYLASTKQDPAT 358

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            ++ A   E  N+  V+S   ++      G  ++A   +  A+    +       A I +
Sbjct: 359 AVRLAQE-ELNNRGDVQSHDALAWALASAGQYEEAAVHSDAALAEGTQDARMFYHAGIIE 417

Query: 370 ANSHNTDKILYWTQSA 385
            N  N++K +     A
Sbjct: 418 ENRGNSEKAMQLLIEA 433


>gi|329297650|ref|ZP_08254986.1| tetratricopeptide repeat protein [Plautia stali symbiont]
          Length = 389

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 78/248 (31%), Gaps = 25/248 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  A+  L  +    G  + A+             IS
Sbjct: 83  GEVDRAIRIHQSLMESASLTYDQRLLAIQQLGRDYMAAGLYDRAEDMFSQLIDEIDFRIS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W +AI    +  K  K+  +   A      +L+     D+ 
Sbjct: 143 -----ALQQLLLIHQATSDWQKAIEVAERLVKLGKDKQKGEIAHFYCELALQALSSDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILE--KIWKVNPHPEIAN 297
            +     +       S   SI   + L+ Q +  KA      +LE  K       P +  
Sbjct: 198 RAMSLLKKGEAADHQSARVSIMMGRILMEQGEYAKAAQRLQRVLEQDKELVSETLPMLET 257

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y  L   +   +     R  E N  +  + + ++ I  +    + A       ++  P 
Sbjct: 258 CYQRLEQSDRWAQF--LQRCVEENTGAA-AELYLADILEQQQGQEAAQLYINRQLQRHPT 314

Query: 358 KEIF-LLL 364
             +   L+
Sbjct: 315 MRVLHRLM 322


>gi|113461116|ref|YP_719184.1| tetratricopeptide repeat protein [Haemophilus somnus 129PT]
 gi|112823159|gb|ABI25248.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 398

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 93/336 (27%), Gaps = 60/336 (17%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151
             +  A ++H  +     +  E    LL  Q     +       Y+ A     +++  P 
Sbjct: 91  GEVDRALRIHQALDSSSNYTFEQ--KLLAKQ--QLAKDFLTIGFYDRAENLYILLIDEPN 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             E A+  L     +  +   A   A K   ISP       A+   Y             
Sbjct: 147 YAENALQQLAVIYQKTKEWKKAINVAEKLAKISPT--EDNIALAHYYCE----------- 193

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                                    +D+     + H   ++L +   S+ ASI  A+  I
Sbjct: 194 -------------------YSLTLGSDEQQQAQAIHILQQALNVSKTSVRASILIAERYI 234

Query: 272 SQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
              + ++A   LE +      +     P +   Y  L     +   +  L        + 
Sbjct: 235 VNLEYQRAVQHLENVLIQNADYMSEILPALKYCYQELNR---LDNFELFLIRASQTSNN- 290

Query: 326 ESLVIVSKIALEMGSID--QAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYW 381
            S V ++   L         A  K    ++  P   I    +  QI+ A +    + L  
Sbjct: 291 -SAVDLALSDLIAEKDGIVAAQTKLHQQLEQHPSTFILHRFIQYQIDAAENGKAKESLIL 349

Query: 382 TQSAL--HAMPDPLWIS-DDGYLSSVWLPLSPISKT 414
               +         +     GY +       P  + 
Sbjct: 350 LHKIVGDRIARGFDYRCSHCGYQTHKLSWNCPSCRK 385


>gi|288960382|ref|YP_003450722.1| TPR repeat-containing protein [Azospirillum sp. B510]
 gi|288912690|dbj|BAI74178.1| TPR repeat-containing protein [Azospirillum sp. B510]
          Length = 1199

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 71/244 (29%), Gaps = 11/244 (4%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L +        +   A      +L        A++ L   + + G    A     +AL  
Sbjct: 8   LAQAVAHHQAGRAMEAERGYRAVLATDPRNADALHLLGVLALQSGRAEEAVTLIGEALAQ 67

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +       + +      A   + A+           +  + R  L  A +++    G   
Sbjct: 68  AKGVADYWDNLGSALSAAGRPAEAVQAHRNAATLDAQGAQRRLNLGNALAVQ----GRHQ 123

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298
            +      +L L  +   A         ++++   A   L+   ++ P     H  + + 
Sbjct: 124 EAERAFTAALALKPDYAKAWYNLGNGFAARHRYADAVTALDHAVRLTPGMVEAHNNLGDA 183

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                  +      R   +     +   +   +  +  + G+++ A      A+K  PR 
Sbjct: 184 LAMTGRLDEAIVQHRL--VTRHRPDDATAHYNLGAVLQQKGALEGAEIAYRQALKRNPRH 241

Query: 359 EIFL 362
              L
Sbjct: 242 SAAL 245


>gi|198284408|ref|YP_002220729.1| tetratricopeptide repeat-containing protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218667320|ref|YP_002427076.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248929|gb|ACH84522.1| Tetratricopeptide TPR_2 repeat protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218519533|gb|ACK80119.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 279

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 5/126 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             LL  +   A  +   A      +L  P         L   + R GD+  A     +A 
Sbjct: 87  TDLLRARALAATGEPAQAERYFRRVLGTP-LAAQGYQGLGLIAARGGDITRAIPLFQRAT 145

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              P    +   +    +  K W+ A   L +  + A +  R  + + +   L    +GD
Sbjct: 146 REDPTNAGILNDLGYAALQGKAWNVARNALFRAGELAPQDERVWSNIALYYLL----RGD 201

Query: 242 MIASYH 247
              +  
Sbjct: 202 SFRAQQ 207


>gi|170744697|ref|YP_001773352.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168198971|gb|ACA20918.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 839

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 63/209 (30%), Gaps = 21/209 (10%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G L+ A     +AL  +P          +   L  E  RAI  L +      +    
Sbjct: 265 KQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTRAIALNPKSP-- 322

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ--NKKRKAEVI 282
             + L  R       G    +  D  E+L+   + +  +  A + L  +   +   A   
Sbjct: 323 --VALTFRGDAYRQAGQPDRAIADYDEALRAVPDFV--AAFAGRGLAREQRGEASLARAD 378

Query: 283 LEKIWKVNPHPEIA-------------NIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            E+   ++P  + A                  L +E   G  + A            S  
Sbjct: 379 FERAMGLSPDRDAALARPAQALAHERIAALASLQAERARGATRAAESRIAEESAKRASAT 438

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             ++ A +     +A A+A    +   R 
Sbjct: 439 QAAEDARDARLRAEAEAQARSEAESRARA 467


>gi|149920333|ref|ZP_01908803.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149818775|gb|EDM78217.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 1618

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L   ++  +     RA+L    +  + ++ D  A+  +   +L L      A     +
Sbjct: 15  EVLAALQQTPEHERELRAVLAFTIARWSLERSDENAAVENLRAALALVPELRPAMRMLYR 74

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-EIANIYTH 301
               +N  R A   L++  +   HP E A +Y  
Sbjct: 75  VYGDRNDVRNAVTFLDQEIRATRHPREAAALYRE 108



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 56/193 (29%), Gaps = 10/193 (5%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN----IAHEKLEMM 146
           G +++   +   AR +      Q   H   +  L     AL     +    +   +  ++
Sbjct: 545 GELALELGDRDKARDLFEVALDQVDDHQASMTSL----EALLRGDRDWDRLLELLRKRLL 600

Query: 147 LQIPATREFAVYSLY--FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
                +R+ ++        + R+     A     + L+  P       A         +W
Sbjct: 601 YATDRSRQVSLRLEIASILATRLDRSEDALTELEQLLERFPRHLPALHAAENLATRLSQW 660

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
              +  +       +       +L  + ++      D   +  + + +L+L     +A  
Sbjct: 661 PTLVKLIEAHVAAVQGPRTRALLLHRSANIRARHLSDPEGAVRELVRALELWPQLGVARA 720

Query: 265 CAAKSLISQNKKR 277
              +      + R
Sbjct: 721 LLLRLYEKLGRSR 733


>gi|47207592|emb|CAG02333.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 502

 Score = 44.9 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++  T      V  L  Y+E C    ++ A ++  
Sbjct: 187 KILKAECLALLGRYPEAQSVASDILRMDPTNADALYVRGLCLYYEDC----IDKAVQFFV 242

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A    ++         +  A
Sbjct: 243 QALRMAPDHEKARLACRNAKALKAKKEEGNKVFKEGNFEAAFDLYSEALTIDPNNIKTNA 302

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R+   +    +  +  D  +++KL +  I A +  A+  +   +  +A    E +
Sbjct: 303 KLYCNRATVGSKLNKLEQAIEDCTKAVKLDETYIKAYLRRAQCYMDTEQYEEAVRDYEHV 362

Query: 287 WKVN 290
           ++  
Sbjct: 363 YQAE 366


>gi|322701171|gb|EFY92922.1| mitochondrial outer membrane 72Kda protein [Metarhizium acridum
           CQMa 102]
          Length = 622

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 5/197 (2%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +S+       A     +        ++  VY    Q +  +     A +  +  + +   
Sbjct: 378 ISLELGEPVKAD--AEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKD 435

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             F+   L     ++G + S+     + +   P  P V     +  +    +S A+   +
Sbjct: 436 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQSNFSEAVEKFD 495

Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  K+        + LI ++L     K D   +     ++L +     +A    A+ 
Sbjct: 496 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEQLCQKALIIDPECDIAVATMAQL 555

Query: 270 LISQNKKRKAEVILEKI 286
           L+ QNK  +A    E+ 
Sbjct: 556 LLQQNKVTEALTYFERA 572


>gi|260101626|ref|ZP_05751863.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260084559|gb|EEW68679.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 415

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 32/264 (12%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172
           F  E L  +   +I L +   +     L ++  +       +  L  ++      G + +
Sbjct: 62  FPQEDLFKVYLAEIMLNDGDEDD---GLSLLYGVSKESSAYLDGLLVQADYYQTNGLIET 118

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229
           A+    +AL ++P    +   + +   L+  + +A+     L Q++K   E N N+ ++ 
Sbjct: 119 AKDKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKTFGEVNLNQRLIA 178

Query: 230 IARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               L N +    I   H +    I+S K     +M ++             +A  +L++
Sbjct: 179 TNAKLGNYEAAAKIIREHSSSLLDIDS-KYEAGLVMLAV---------GNDDQAIKLLDE 228

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMG 339
           +   +P     +P +A  Y H    +    L+        N E  E+L  + ++ A  + 
Sbjct: 229 VIDQSPDYVNAYPLLAQAYEH--KHDNEQVLRTVQAGLAYN-ELDETLYSMGARAAANLN 285

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363
            +D A       +K AP      +
Sbjct: 286 QLDTAADLLEKGLKKAPDNSELRM 309



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 21/194 (10%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +        E  +     ++      Y  A    E ++Q   T     +     + R
Sbjct: 121 DKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKT-----FGEVNLNQR 175

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---------LAKEWSRAITFLNQKKKN 217
           +   N+       A  I  +      +++                   +AI  L++    
Sbjct: 176 LIATNAKLGNYEAAAKIIREHS---SSLLDIDSKYEAGLVMLAVGNDDQAIKLLDEVIDQ 232

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           + ++     +L  A      D   ++ +    +   +L +         A++  + N+  
Sbjct: 233 SPDYVNAYPLLAQAYE-HKHDNEQVLRTVQAGLAYNELDETLYS---MGARAAANLNQLD 288

Query: 278 KAEVILEKIWKVNP 291
            A  +LEK  K  P
Sbjct: 289 TAADLLEKGLKKAP 302


>gi|239997060|ref|ZP_04717584.1| TPR domain protein [Alteromonas macleodii ATCC 27126]
          Length = 592

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 6/141 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           ++     LL  +          A +  E +L         + +L + +    +L  A+  
Sbjct: 443 NDIPSAMLLAER--QIGNDRAAAIKTYEQVLTKTPDNFVVLNNLAYLAFEDKNLTRAEEL 500

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARS 233
           A KA+ +  +     + + Q YV   + + A+        +     +   N   +L+   
Sbjct: 501 AKKAVSLQRENADAVDTLAQIYVAKGDKAAALKLYEEVSARPIANDDVYLNHVSVLLELD 560

Query: 234 LENADKGDMIASYHDAIESLK 254
            +       +AS     E+ K
Sbjct: 561 KKALASRK-LASREFKSEAAK 580


>gi|206603461|gb|EDZ39941.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 327

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 11/211 (5%)

Query: 160 LYFESCRI-GDLN--SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  +  R   D     A   A+  L+  P    +   ++   +L   +  A+  + +   
Sbjct: 20  LVPQIQRSLEDREWLKAFHLASSMLEKYPSNETLRYLLLDALILGGRYDNALDRVREFLV 79

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           N  E +R    LL       + +  +        ESL   +      +  A SL    + 
Sbjct: 80  NMPENHRLNLYLLHLLVYHKSFEEALALGKSLLKESLTSMEKRD-VLLHTAFSLHGTGEL 138

Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           RKA  +L ++   +P + +    +  IY          +    L L E++        ++
Sbjct: 139 RKAVRMLNELLDEDPLNTDALETLGKIYFEQGHFEEAERY--FLELAEMDPAHPRVHQLL 196

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             +  E G  D+A  +   AM+IAP  E+  
Sbjct: 197 GLLYSEQGKWDEAIMEWEEAMEIAPSDEVLR 227


>gi|167536099|ref|XP_001749722.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771870|gb|EDQ85531.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1397

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 90/303 (29%), Gaps = 53/303 (17%)

Query: 127  VQIALAERQYNIAHEKLE-MMLQIPATRE---FAVYSLYFESCRIGDLNSAQRYATK--- 179
             Q    +  ++ A E  +      P  R         +   + R GD++     A +   
Sbjct: 800  AQQLEFQGNFSRALEHYQTAQTNDPRERVHNDACKAGIARCALRTGDVSRGLALAEEIGS 859

Query: 180  ---------ALDISPDAPWVT---------EAVVQQYVLAKEWSRAITFLNQ------KK 215
                     AL+ +                +   + Y+  K W +A   L        + 
Sbjct: 860  IKLFTECGAALEATDHFNEAAQCYERANMVDKAAEMYIKTKNWVKAGEMLESVSNTALQL 919

Query: 216  KNAKEWNRNRAILLIARSLENADKGDMI-----ASYHDAIESLKL--CDNSIMASICAAK 268
            + AK    + +    A + E A+    +         D  E++++     S+  +   A 
Sbjct: 920  QYAKAREASGSYKEAATAYEAANDVVSVVRINLDHLRDPQEAVRVVRASGSVEGAKMVAN 979

Query: 269  SLISQNKKRKAEVILE------KIWK-VNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
                      A   L       + +     H ++ ++Y   L +            ++I 
Sbjct: 980  FFQKIGDAPSAIQFLIMSRNADEAYAMAKQHNQL-DLYAEALGDAGTP-----EVYKQIA 1033

Query: 322  KESVE--SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
            ++     + +   +  L+ G  D A  + + A           + A  E   +  T ++L
Sbjct: 1034 EDYDRLGNGLQAGRFFLQAGLYDDAVNRLVQASTEDGEHVELAIRAAGEAGETGLTQRVL 1093

Query: 380  YWT 382
             + 
Sbjct: 1094 DYL 1096


>gi|332665291|ref|YP_004448079.1| hypothetical protein Halhy_3347 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334105|gb|AEE51206.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 460

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 4/131 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+G +++A+    +AL + P        + +  +  ++W  AI F ++  +        
Sbjct: 278 LRLGRVSTAKPLLMEALRLEPHNDEAFFHLAEVAIAEEQWQLAIHFCSKAIEIDDNREEY 337

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A++    + E    GD   +      + ++    +   +  A  L+  ++   A  IL+
Sbjct: 338 HALIAAVYAQE----GDYELAEEHYDRATEIAPEDVSLWLQYAVLLMETDRAEAALEILD 393

Query: 285 KIWKVNPHPEI 295
              +    PE+
Sbjct: 394 IAEESAVGPEL 404


>gi|297569822|ref|YP_003691166.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925737|gb|ADH86547.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 460

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 54/124 (43%), Gaps = 10/124 (8%)

Query: 258 NSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL--LSENTVGKL 311
            S+ A+   + + + ++++ +  +A  +L   ++ +P HPEI  +       S  T   +
Sbjct: 43  GSLPAAADPVLSGRQMLAEQRYDEAYELLLTAFRADPGHPEINFLLGRAAFESGRTEEAV 102

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF----LLLAQI 367
               R+   N E+  + + +++  L +GS + A       +   P + ++      LA +
Sbjct: 103 MAYERVLLHNPEANRAKLELARSYLRLGSRELARQYFHEVLATNPPEPVWQNIQRFLAAM 162

Query: 368 EQAN 371
           + A 
Sbjct: 163 DAAE 166



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 7/98 (7%)

Query: 97  AHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIP 150
           +    LA + +        +          +  L  + A    +   A    E  +L  P
Sbjct: 54  SGRQMLAEQRYDEAYELLLTAFRADPGHPEINFLLGRAAFESGRTEEAVMAYERVLLHNP 113

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 +  L     R+G    A++Y  + L  +P  P
Sbjct: 114 EANRAKLE-LARSYLRLGSRELARQYFHEVLATNPPEP 150


>gi|262305023|gb|ACY45104.1| acetylglucosaminyl-transferase [Polyzonium germanicum]
          Length = 284

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +P A + ++   Q    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVPDAEECYNTALQLSPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPSF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   + +       A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVPDAEECYNTALQLSPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K   A +  ++  ++   P  A+
Sbjct: 66  EQGFTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ--PSFAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPSFADAHSNLASIHKDSGNIPEAITSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|195336539|ref|XP_002034893.1| GM14398 [Drosophila sechellia]
 gi|194127986|gb|EDW50029.1| GM14398 [Drosophila sechellia]
          Length = 1152

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 93/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  + +    A  I   K  + + A+I
Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLSAYGTASSILRDKAKYEIPAEI 453



 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 73/240 (30%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    ++
Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLS 432

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A+  LE                 
Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKRTLESA--------------- 477

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    + + +  ES        ++++   M S D A       +K  P
Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528


>gi|307324487|ref|ZP_07603694.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Streptomyces violaceusniger Tu 4113]
 gi|306889731|gb|EFN20710.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Streptomyces violaceusniger Tu 4113]
          Length = 936

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 22/204 (10%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           + R GDL  A   A  A+       W      +   ++Q       +  A+  L Q   +
Sbjct: 618 ALRQGDLQVAAHQARTAMSRISVQGWGVGIGLLLSTLIQAETGMGHYDEAMALLEQPLPD 677

Query: 218 -------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKS 269
                     + R R    +A     A  GD  A+    +++ ++         + AA++
Sbjct: 678 ELFQTLPGLFYLRARGRCHLATGRYQAALGDFTAAGE-VMDAWRMDMPLLTPWRLDAAET 736

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVE 326
            ++    ++A  + E+  ++ P       A +     ++    ++ R     EI    +E
Sbjct: 737 WLALGDPKRARALAEEQLRLGPEDARLRGALLVVLARTDELKRRVPRLKEAVEI----LE 792

Query: 327 SLVIVSKIALEMGSIDQAHAKAML 350
                 ++A+ +G + +A+     
Sbjct: 793 GGDDRIQLAIALGELGRAYRSLGD 816


>gi|300866689|ref|ZP_07111373.1| putative (Heparan sulfate)-glucosamine 3-sulfotransferase 1
           [Oscillatoria sp. PCC 6506]
 gi|300335289|emb|CBN56533.1| putative (Heparan sulfate)-glucosamine 3-sulfotransferase 1
           [Oscillatoria sp. PCC 6506]
          Length = 398

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 50/135 (37%), Gaps = 5/135 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G L  A  +  KA++I+PD+P     + +      +   AI    +       +    A
Sbjct: 15  EGKLEEAIAHYRKAVEINPDSPLAYHNLGKALQQNGQLEDAIAAQQKAIILQPNFT--PA 72

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              +  +    +   +        + +++  +  +  +  A +L  Q K  +A  + +  
Sbjct: 73  YFPLRYAPLPNNSSLIDDLIALYRQVIEILPDFPLVYVHLAAALTKQGKIEEAIAVYQTA 132

Query: 287 -WKVN--PHPEIANI 298
            +K     HPE+A +
Sbjct: 133 VYKQTLVSHPELAQV 147


>gi|302765547|ref|XP_002966194.1| peptide-N-acetylglucosaminyltransferase [Selaginella
           moellendorffii]
 gi|300165614|gb|EFJ32221.1| peptide-N-acetylglucosaminyltransferase [Selaginella
           moellendorffii]
          Length = 985

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 83/273 (30%), Gaps = 33/273 (12%)

Query: 101 PLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156
             A   H+          +  L  LL+ Q          A+      ++I  T   A   
Sbjct: 181 AAACCRHALTLNPRLVDAHSNLGNLLKAQ-----GLAPHAYYCYAEAIRIQPTFAIAWSN 235

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L  E+   GD   A  Y  +A+ + P+       +            A+  L + ++
Sbjct: 236 LAGLLMEA---GDYERALAYYQEAIRLKPNFADAHLNL----------GNALKNLGKAQE 282

Query: 217 NAKEWNRN------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +   + R        AI     +    ++G +  +     +++ L  + I A      +L
Sbjct: 283 SIVCYLRAIQLRPDYAIAYGNLASVYYEQGQLDQAILHYHKAIMLDSSFIEAYNNLGNAL 342

Query: 271 ISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESV 325
               +  +A    +    +   HP+    + NIY      +      +A         + 
Sbjct: 343 KDAGRVDEAIACYQHCLTLQANHPQALTNLGNIYMEWNMISMAANFYKATLNVTTGLSAP 402

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            S +         G   +A A     ++I P  
Sbjct: 403 YSNLATIYKQQAKGHYAEAIACYNEVLRIDPTA 435


>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
          Length = 733

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 133 ERQYNIAHEKL-EMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           +     A     + +L     P     A+ +L       G+++ A     KAL+I  D P
Sbjct: 231 QGDIETAINYFNKALLLKWNYPE----ALNNLGIAFKAKGEISPAINSWRKALEIKTDFP 286

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            V   +   Y+       AI F  +     + +    A+  +  SL+  +KG++ A+   
Sbjct: 287 EVYYNLGSIYLDQGNIETAINFFKKALILKENYP--EALNNLGNSLQ--EKGELDAAIAA 342

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
             ++L    +   A         +Q     +  I +K   ++P HPEI
Sbjct: 343 YKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKALALHPDHPEI 390



 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 18/143 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G + +   NI  A             + E L  L        + + + A    +  L   
Sbjct: 293 GSIYLDQGNIETAINFFKKALILKENYPEALNNL--GNSLQEKGELDAAIAAYKKALNHK 350

Query: 151 ATREFAVYSLYFESC--------RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            +        Y E+           GDL ++ R   KAL + PD P +   +        
Sbjct: 351 PS--------YREAQNNLGCVYRAQGDLENSIRIFKKALALHPDHPEILSNLGTSLEEKG 402

Query: 203 EWSRAITFLNQKKKNAKEWNRNR 225
           +   AI+  N    N   +    
Sbjct: 403 DLEAAISSFNNAISNNSNYPTAH 425



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 94/285 (32%), Gaps = 27/285 (9%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
              A+ + N+A     + +   P   E   Y+L F     GD+ +A  Y  KAL +  + 
Sbjct: 193 ALQAKGEKNLAISSFIKALEIKPEFPEA-CYNLGFIYLNQGDIETAINYFNKALLLKWNY 251

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P     +   +    E S AI    +  +   ++      +         D+G++  + +
Sbjct: 252 PEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPE----VYYNLGSIYLDQGNIETAIN 307

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302
              ++L L +N   A      SL  + +   A    +K     P        +  +Y   
Sbjct: 308 FFKKALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRA- 366

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE 359
              +    ++   +   ++ +  E L  +     E G ++ A +    A+      P   
Sbjct: 367 -QGDLENSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTAH 425

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS----------ALHAMPDPLW 394
             L L  + + + HN  +   W             AL     P W
Sbjct: 426 YNLSLCLLSKGDYHNGWQQHEWRWKNWEKNGGNSGALTTTR-PTW 469


>gi|28574254|ref|NP_788449.1| CG2469, isoform B [Drosophila melanogaster]
 gi|28574256|ref|NP_788448.1| CG2469, isoform A [Drosophila melanogaster]
 gi|7292059|gb|AAF47472.1| CG2469, isoform B [Drosophila melanogaster]
 gi|17862386|gb|AAL39670.1| LD24034p [Drosophila melanogaster]
 gi|23092752|gb|AAN11469.1| CG2469, isoform A [Drosophila melanogaster]
 gi|220947488|gb|ACL86287.1| CG2469-PA [synthetic construct]
          Length = 1150

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 93/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  + +    A  I   K  + + A+I
Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLSAYGTASSILRDKAKYEIPAEI 453



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 74/240 (30%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    ++
Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLS 432

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A++ LE                 
Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKLTLESA--------------- 477

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    + + +  ES        ++++   M S D A       +K  P
Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528


>gi|50293839|ref|XP_449331.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528644|emb|CAG62305.1| unnamed protein product [Candida glabrata]
          Length = 600

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 11/169 (6%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+    + Y  A E  +   +      F    L   + R   +   ++   +A    P
Sbjct: 386 RGQMYFITQNYEKAGEDFKKSKESDPKNIFPYIQLACLAYRENKMAECEKLFEEARKTFP 445

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLN--------QKKKNAKEWNRNRAILLIARSLENA 237
            AP V     +      +   A+   N        QK+ +           ++AR     
Sbjct: 446 TAPEVPNFYAEILADKGDIDEAVKQYNIAYRLESLQKQIHVGIAPLVGKATILARQPTPE 505

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +   +     DA ++      S  A +  A+  + Q K  +A  + E+ 
Sbjct: 506 NFATISQLLEDACKA---DPRSEQAKVGLAQLRLQQEKVDEAIELFEEA 551


>gi|71276296|ref|ZP_00652574.1| TPR repeat [Xylella fastidiosa Dixon]
 gi|71900307|ref|ZP_00682443.1| TPR repeat [Xylella fastidiosa Ann-1]
 gi|71162904|gb|EAO12628.1| TPR repeat [Xylella fastidiosa Dixon]
 gi|71729955|gb|EAO32050.1| TPR repeat [Xylella fastidiosa Ann-1]
          Length = 690

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 12/227 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G L+ A++ +  A  I  D P +        +   +  +A+  L+Q  +   E   
Sbjct: 110 AIARGALDEAEQLSRTAARIISDHPQLLAVNATIALRRGQVDQALAMLSQAVELLPE--- 166

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               +L +       KG +  +       ++L  + I      A+    Q +   A  IL
Sbjct: 167 -EPGVLFSLGFAYLQKGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRIL 225

Query: 284 EKIWKVNP--HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           E+   +     P +  +     LL+ N    L    ++     E   +L  +     ++ 
Sbjct: 226 EEALSLTEGDTPALHRLTGEFELLAGNPDRALPHLRQVLVTWPEDPRTLEALLTAWKQLD 285

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD---KILYWTQ 383
             D A      A+ I PR     L A++  A   + +    I  W  
Sbjct: 286 MDDDARVTLDAALDIKPRNHDLWL-ARLAVAPVGSDEARIVIERWLS 331



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 32/296 (10%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++    +  A  M S          E  V        L +     A    + ++++   
Sbjct: 143 IALRRGQVDQALAMLSQAV--ELLPEEPGVLFSLGFAYLQKGHIAFAERAFQRVIELNP- 199

Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITF 210
               V +L  + + R G L+ A R   +AL +   D P +     +  +LA    RA+  
Sbjct: 200 HVIPVRALIAQLAQRQGRLDDALRILEEALSLTEGDTPALHRLTGEFELLAGNPDRALPH 259

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L Q      E  R    LL A    + D  D   +   A++      +        A+  
Sbjct: 260 LRQVLVTWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKPRNHDL-----WLARLA 313

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESL 328
           ++     +A +++E+             +   + E+          L  ++  + + E+ 
Sbjct: 314 VAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQNNPEAA 356

Query: 329 VIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
             V++  +A+E G +          ++  P   +  L   IE    H    +  W 
Sbjct: 357 ETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVTCLQQLIESVPEHERTILRPWL 412


>gi|332084025|gb|EGI89232.1| cellulose synthase operon protein C [Shigella dysenteriae 155-74]
          Length = 453

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 71/194 (36%), Gaps = 5/194 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 253 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 312

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++    I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 313 GNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 372

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ PE    Y 
Sbjct: 373 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 432

Query: 301 HLLSENTVGKLKRA 314
             LS +   +  RA
Sbjct: 433 LYLSGHNQDRAARA 446


>gi|239996200|ref|ZP_04716724.1| Thioredoxin domain-containing protein [Alteromonas macleodii ATCC
           27126]
          Length = 289

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 11/148 (7%)

Query: 140 HEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
            +++  ML      P     A      ++ + GD   A   A +AL ++PD       ++
Sbjct: 106 EQQIREMLAKYLPNPEDDLLATAG---KAIQQGDYAEALPAAKEALALNPDNVNAKYMLI 162

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             Y+       A   L +  K   + +R +++       E A     I     A+E+   
Sbjct: 163 DCYIETGSIDTAKALLEE-IKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVIL 283
                   +  A  L   NK + A  +L
Sbjct: 222 DLQL---KVDLAVQLQQANKAQDALELL 246



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 291 PHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+PE   +A     +   +    L  A     +N ++V +  ++    +E GSID A A 
Sbjct: 118 PNPEDDLLATAGKAIQQGDYAEALPAAKEALALNPDNVNAKYMLIDCYIETGSIDTAKAL 177

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                 +        L  +IE A        +   Q+A+ A PD
Sbjct: 178 LEEIKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 15/110 (13%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+A + +   +GD   +   A E+L L  +++ A        I       A+ +LE+I  
Sbjct: 124 LLATAGKAIQQGDYAEALPAAKEALALNPDNVNAKYMLIDCYIETGSIDTAKALLEEI-- 181

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
                        +  ++    L   + L E   ++ E   +  + A+E 
Sbjct: 182 -----------KLVDQDSRYKSLAGKIELAEQAADTPEIRQL--QAAVEA 218


>gi|170691429|ref|ZP_02882594.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
 gi|170143634|gb|EDT11797.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
          Length = 469

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 58/196 (29%), Gaps = 22/196 (11%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           AA +      +H      +       V+ L  QI   + ++  A                
Sbjct: 7   AASDNSNISSLHDQALAAYRAGRHDTVHALAAQILTLDGEHTGAMH-------------- 52

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +  L   +   G    AQ +  +A+++ P+A  +   +    +   +   A+  L +  
Sbjct: 53  -LEGLL--ALAAGQPEVAQHWIERAIELGPEAN-LYNTLYAIQLRLGDHDGAVDSLRKGL 108

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               E+      L    +L          +      ++K+      A     +       
Sbjct: 109 ALQPEF----TALHYNLALTLQHLDRPEDAAVSYRRTIKIEPGHSAAHNNLGRIFADLGA 164

Query: 276 KRKAEVILEKIWKVNP 291
            ++AE    +  ++ P
Sbjct: 165 LQEAEHHYRRALELAP 180


>gi|86139022|ref|ZP_01057593.1| TPR domain protein [Roseobacter sp. MED193]
 gi|85824253|gb|EAQ44457.1| TPR domain protein [Roseobacter sp. MED193]
          Length = 580

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 4/204 (1%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L ++          +                 LL  ++     +Y ++    + +     
Sbjct: 270 LAAVMNGEAANDFVLMYARVASALSPQHVDAVLLSAELLDQLGRYELSIATYKQVPSDHP 329

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A         R    ++A     + +   P  P V+ ++       ++++ AI+  
Sbjct: 330 EYYAAEMGRAEALRRAAKPDAAAEVLEQLVGDFPTLPQVSISLGDLLRQQEDYAGAISAY 389

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +    N  + +R+R  L  AR +      D   +  D   SL L  +S         SLI
Sbjct: 390 DAALSNMSDDSRSRWFLHYARGISYERLKDWPKAEADFRASLALRPDSPQVLNYLGYSLI 449

Query: 272 SQ----NKKRKAEVILEKIWKVNP 291
            +    +K  +A  ++E+     P
Sbjct: 450 EKEDSPDKLDEALGMIEQAVAAQP 473


>gi|297843222|ref|XP_002889492.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297335334|gb|EFH65751.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 360

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 22/148 (14%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               K +S AI    +        +   +IL   RS  N   G+   +  DA ES++LC 
Sbjct: 43  RKGKKHYSEAIDCYTKAINQGVLSDSETSILFSNRSHVNLLLGNYRRALTDAEESMRLCP 102

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
           +++ A   AAK+ +S +   +A+   EK                + ++ +   +K+ L+L
Sbjct: 103 HNVKAVYRAAKASMSLDLLNEAKSYCEK---------------GIENDPSNEDMKKLLKL 147

Query: 318 EEINKESVESL-------VIVSKIALEM 338
               K+  E         V+ +K  L  
Sbjct: 148 VNSKKQEKEQHEAQVSRAVVEAKACLSA 175


>gi|295675407|ref|YP_003603931.1| Tetratricopeptide TPR_4 [Burkholderia sp. CCGE1002]
 gi|295435250|gb|ADG14420.1| Tetratricopeptide TPR_4 [Burkholderia sp. CCGE1002]
          Length = 613

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 93/247 (37%), Gaps = 11/247 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180
            +L  +IAL   Q   A++    + +       A  +  +   +    D  +A +     
Sbjct: 87  QVLAAEIALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQ-- 144

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              +P +    +      VL+ +   A   L+Q+     E NR  AIL +   L      
Sbjct: 145 -QYAPGSERAAQLDASLLVLSGKPDDAAPILSQELAKVPEENRGSAILALQLLLS--RGP 201

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANI 298
           + +   H   E LK   N   A +  A+  +  +    A   LE+   + P   P  A +
Sbjct: 202 NRVGGLHVLQELLKNDMNRPEAQLAVARQQLLADDAPGARKSLEQALTIKPDYLPA-ALV 260

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            + +  E     +    +  + N +S ++ + ++++ L    +D A  +  + M+ A   
Sbjct: 261 LSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRLDDAQKQFEI-MRKANAN 319

Query: 359 EIFLLLA 365
           ++  L+A
Sbjct: 320 DLTPLMA 326



 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 12/165 (7%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +   A      +L      D +A+     +       S  A+   A  L+   K 
Sbjct: 111 ARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQQ---YAPGSERAAQLDASLLVLSGKP 167

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331
             A  IL +     P     +    L        N VG L     L + +    E+ + V
Sbjct: 168 DDAAPILSQELAKVPEENRGSAILALQLLLSRGPNRVGGLHVLQELLKNDMNRPEAQLAV 227

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANS 372
           ++  L       A      A+ I P       +   +   E+   
Sbjct: 228 ARQQLLADDAPGARKSLEQALTIKPDYLPAALVLSQMGPEERKEG 272



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 86/253 (33%), Gaps = 30/253 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ----RYA 177
             L   Q+ LA  + + A ++ E+M +  A     + +L     +  +L  AQ    +YA
Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMRKANANDLTPLMALALIKIQQKNLPEAQTYLIQYA 348

Query: 178 TKALDISPDAPWVTEAVVQQ---------YVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            +A + +P A    +A +              A +W   I+            ++     
Sbjct: 349 QQA-EKTPGAD-AGQAYIYLAQLALEQKNEGAAGDWLNKIS----------PASQQYLAA 396

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIW 287
            I R+   A +G    +             +  + +   A  L    +  +AE  L++  
Sbjct: 397 QITRAQLLAKQGKTDEARQLLANLQTADPRDVALIARTDAAILFDAKRYPEAEARLQQAT 456

Query: 288 KVNP-HPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVS-KIALEMGSIDQ 343
              P  P++   Y     +     +   +  +L +   ++ ++   +   +A     + +
Sbjct: 457 ANFPDDPDLTYDYAMAAEKTGHYDVMEAQLRKLIQTQPDNPQAYNALGYSLADRNQRLPE 516

Query: 344 AHAKAMLAMKIAP 356
           A      A  +AP
Sbjct: 517 ADKLVEKASALAP 529


>gi|209524929|ref|ZP_03273474.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
 gi|209494578|gb|EDZ94888.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
          Length = 790

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 104/329 (31%), Gaps = 42/329 (12%)

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102
             L+ L  FL  + L+    R     PA            +G + L  G       N   
Sbjct: 359 AALAGLLVFLGLFELVVPTFR-----PAYYVR--------RGNQLLNDG-------NTED 398

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSL 160
           AR M    + +   ++          +A    +++ A     + +   P  +        
Sbjct: 399 ARNMFVRAT-EIQPNHAAAWAGQADALAEL-GRHDRALVDYQKALELDPDNSDVLTSKGT 456

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKK 216
                + G+   A     +A+ I P+          A++        +  A++   Q K 
Sbjct: 457 LL--YQTGEPQKALDAHEQAIAIDPNNARAWHGKGIALIGLQ----RYDEAVSAFEQAKT 510

Query: 217 NAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                     ++A+ L  +            +     + L+         +     L   
Sbjct: 511 IRPSAPSVWQSKALALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL 570

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE-SVESLVIV- 331
            +  +A    +K  ++NP    A +    +  + +G+ + A+R+ +   E   ES +   
Sbjct: 571 GRHEQALESYQKALEINPQHFQALLQKGNVLFSPLGRTEEAVRISDRAIEVQPESHLAWH 630

Query: 332 SKIALEM---GSIDQAHAKAMLAMKIAPR 357
           ++ ++     G  + A A    A+++ P 
Sbjct: 631 NRGSILAGGRGDFEGAIAAYDRAIELRPS 659



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 49/147 (33%), Gaps = 24/147 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVY--SLYF----ESCRIGDLNS--------AQRYATK 179
             +  A    +  +++  +   A+           ++ R     S        A     +
Sbjct: 641 GDFEGAIAAYDRAIELRPSFVPALRDRGFALSQWSQALRAEGNTSMANAKINEALESFDR 700

Query: 180 ALDISPDAPWVTEAVVQQYVL---AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           AL+I+P+     +++V + +       +  ++   ++ +    E      ++L+ R L  
Sbjct: 701 ALNINPND---HQSLVGRAIAFSHQGRYDESLNAFDKAQ----EIQPQDPLILVNRGLVL 753

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMAS 263
              G    +     E+LK+      A 
Sbjct: 754 ERMGRYNEAIDAYDEALKIQPGFPPAV 780



 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 58/254 (22%)

Query: 126 EVQIALAERQYNIAHEKLEM--------MLQIPATREFAV-YSLYFESCRIGDLNSAQRY 176
           +      + +   A +            + + P   E  V           G    A   
Sbjct: 522 KALALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL--GRHEQALES 579

Query: 177 ATKALDISPDAPWVTEAVVQ----QYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILL 229
             KAL+I+P      +A++Q     +        A+   ++  +   E +    NR  +L
Sbjct: 580 YQKALEINPQH---FQALLQKGNVLFSPLGRTEEAVRISDRAIEVQPESHLAWHNRGSIL 636

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMA------SICA-AKSLISQNKKRKAEVI 282
              +    D    IA+Y  AIE   L  + + A      ++   +++L ++     A   
Sbjct: 637 ---AGGRGDFEGAIAAYDRAIE---LRPSFVPALRDRGFALSQWSQALRAEGNTSMANAK 690

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           + +                         L+   R   IN    +SLV  +      G  D
Sbjct: 691 INEA------------------------LESFDRALNINPNDHQSLVGRAIAFSHQGRYD 726

Query: 343 QAHAKAMLAMKIAP 356
           ++      A +I P
Sbjct: 727 ESLNAFDKAQEIQP 740


>gi|153872083|ref|ZP_02001078.1| TPR domain containing protein [Beggiatoa sp. PS]
 gi|152071452|gb|EDN68923.1| TPR domain containing protein [Beggiatoa sp. PS]
          Length = 558

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 84/243 (34%), Gaps = 7/243 (2%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
             EY+   L   IA       +A      + Q     + A  +    + +    + A   
Sbjct: 12  QQEYMYKALIADIARLRGNNILATAYFLDIAQKARHEQVAERA-TQVAWQAKQYDQAIEA 70

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A   + ++P+ P   + + Q  +  +    AI  L+      KE  + +  ++ A   + 
Sbjct: 71  ARLWVTLAPNNPKARQFLGQFLLQQQRTEEAIEHLDVWLNTFKEEPQKQRNIIEALLEQQ 130

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           AD+ +++      +         +   +  ++ L++ N   KA+ +L  +    P  E A
Sbjct: 131 ADQDEVLELMEKLVAKQPNDPARL---LIYSRLLLNANDIEKAQNVLRTLLASIPDHEQA 187

Query: 297 ---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                Y+          L+    +     +  +   + +++  E    D+A  +  L + 
Sbjct: 188 VPLYAYSLEKQNQPQMALQWMKDVLSQYPDKWDWRFMYARMLTEKEQHDKAIEQFQLLLS 247

Query: 354 IAP 356
             P
Sbjct: 248 QYP 250


>gi|13475586|ref|NP_107150.1| O-linked GlcNAc transferase [Mesorhizobium loti MAFF303099]
 gi|14026338|dbj|BAB52936.1| mlr6692 [Mesorhizobium loti MAFF303099]
          Length = 580

 Score = 44.9 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           M+I   ++P AR +   V      + E L   L+ ++AL E  Y  A +  + +L I   
Sbjct: 245 MAIWQGDVPSARALVDDVLASSPDNVEALD--LDAKVALLEADYTRAGQSFQRVLAIDPR 302

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
              A+  +       GD ++A++   +AL I P +  + + +
Sbjct: 303 NAEALVGIGDVRRAQGDDDAARQAYREALAIEPGSSDIEQRL 344



 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 88/298 (29%), Gaps = 18/298 (6%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLY 161
           A  +          + + LV L     A         A +     L +  T + A + L 
Sbjct: 48  AVDLLRRALALKPDNADALVQL---GFAELGRNDLAAARDAFSKALSLAPTYQDASFGLA 104

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-----QYVLAKEWSRAITFLNQKKK 216
               R G+L++A   A       P       A+V+           E  +A     + K 
Sbjct: 105 EIEFRSGNLDAALPLAESVARAQPGNTDAA-ALVENIRKAMQAAGGEARKASVAAPRAKP 163

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                       L+ +       G +  +      +L L   +    +     + S  + 
Sbjct: 164 RPDPV-----AGLMEQGRRLRTAGKLPEAEKVYRRALGLAPKNTDILVALGLIVGSSQRF 218

Query: 277 RKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            +A    ++   + P      I  I   +   +          +   + ++VE+L + +K
Sbjct: 219 DEAGHFFDRALAIKPGLLDARIGKIRMAIWQGDVPSARALVDDVLASSPDNVEALDLDAK 278

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +AL      +A       + I PR    L+     +    + D      + AL   P 
Sbjct: 279 VALLEADYTRAGQSFQRVLAIDPRNAEALVGIGDVRRAQGDDDAARQAYREALAIEPG 336


>gi|330823572|ref|YP_004386875.1| tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329308944|gb|AEB83359.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 593

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 14/205 (6%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y  A + + A   +    +          +             D   +   A  +L   
Sbjct: 170 LYARAGDKALAARVVRLALEEELNNPATGPMAWTTVGRMYLAADDKARALEAAGNALAQN 229

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT--VGKLKRA 314
                A++ + + L  +N   +AE +L +     P PE+   Y  +L E+        + 
Sbjct: 230 PGDDGAAMLSLQLL--ENAVPEAEALLSRYLAGKPLPEVRMAYARVLLESQRLADAQAQV 287

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAP----RKEIFL---LL 364
             +     ++ ++ +I + + L+ G +DQA A        ++  P    R+       L+
Sbjct: 288 DAVTREQPDNAQAWLIRASLQLQAGELDQAEAALQRCTQLLEQDPATEQRQRALTQIYLM 347

Query: 365 AQIEQANSHNTDKILYWTQSALHAM 389
                    +  +   W      A 
Sbjct: 348 QSQIAEKRGDLAQAQAWLARIDDAE 372


>gi|262305017|gb|ACY45101.1| acetylglucosaminyl-transferase [Nicoletia meinerti]
          Length = 289

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+    +  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|195014701|ref|XP_001984064.1| GH15212 [Drosophila grimshawi]
 gi|193897546|gb|EDV96412.1| GH15212 [Drosophila grimshawi]
          Length = 1192

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 166 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERA 223

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 224 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 282

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 283 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 337

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 338 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 397

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  +      A  I   K  + + A+I
Sbjct: 398 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 452



 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 312 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 371

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    + 
Sbjct: 372 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 431

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A+  LE                 
Sbjct: 432 AYGTASSILRDKAKYEIPAEIQNNVASLYYRLGNLKMAKHTLESA--------------- 476

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    + + +  ES        ++++   M S D A       +K  P
Sbjct: 477 ---------LKHASSEMDKDVKYYESIQVTMKYNLARLNEAMSSFDVADKLYKEILKEHP 527


>gi|148556045|ref|YP_001263627.1| sulfotransferase [Sphingomonas wittichii RW1]
 gi|148501235|gb|ABQ69489.1| sulfotransferase [Sphingomonas wittichii RW1]
          Length = 625

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 25/233 (10%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                  A + L  +         A+  +   +CR GDL        +AL ++P      
Sbjct: 20  LPGARAAAEQILRSLPADQP--LLALAGML--ACRTGDLPGGIARLREALKLAPGDQSTR 75

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +V+  +       A       +++ K        +L   +     +G +  +  D   
Sbjct: 76  NNLVRALIETGALDEAAEACAGGERDPK--------MLRLSAYIEHQRGHLDRAVADYEA 127

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--------L 303
            +    +   +         +     +AE  L     +   P+IA  Y +L         
Sbjct: 128 VVAALPDDFESWNNLGNLYAATGHGERAEAPLRTAIALR--PDIALPYLNLAKLLAGLQR 185

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            E+    L+ A        ++ E    +      +G+ D A      A+ ++P
Sbjct: 186 PEDGAELLRAAAAAI---PDNAEIRAELGLAEAALGAFDAAERAYRAAIDLSP 235


>gi|291614670|ref|YP_003524827.1| hypothetical protein Slit_2212 [Sideroxydans lithotrophicus ES-1]
 gi|291584782|gb|ADE12440.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 484

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 19/186 (10%)

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           W+ +   L     +A++       +  A +   A+          AIE  KL  +     
Sbjct: 21  WALSGLVLAAGMAHAQDAINQNERIKTAAAAGTAESTQ----QSAAIERQKLLQD----- 71

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEI 320
              A +LI   K + A ++LE    +    P  +       L S      +    R+  +
Sbjct: 72  ---AANLIKSGKSKDAYLLLEPEQSIRAGDPDYDYLLGIAALDSGKPNEAIFALERVLAV 128

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP----RKEIFLLLAQIEQANSHNTD 376
               +++   +++  L +G    A  +        P       I   L  I Q       
Sbjct: 129 RPNHLQARAEIARAYLAVGEKAAAKQEFETVQSQNPPKEVNATIQRFLDAINQGQGGEAT 188

Query: 377 KILYWT 382
            +  + 
Sbjct: 189 MLSGYL 194


>gi|269213822|ref|ZP_05982924.2| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685]
 gi|269145457|gb|EEZ71875.1| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685]
          Length = 402

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 111/348 (31%), Gaps = 51/348 (14%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155
              AR++   + QQ   ++  L      ++     + + A    + +L  P T    R  
Sbjct: 70  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQTLLDSPDTTGAKRAR 126

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213
            ++ L       G ++ A++     L +     A    + ++  Y   ++W +AI     
Sbjct: 127 VLFELAQNYQSAGLVDRAEQIF---LSLQDGEMAREARQHLLNIYQQDRDWEKAIETAQL 183

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAKSL 270
              + + +    +      +  +  K +   +      A+E+ K C     A++      
Sbjct: 184 LSHDEQTYQFEISQFYCELAQASLFKSNFDVARFNVGKALEANKRC---TRANMILGDIE 240

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIA-------NIYTH-LLSENTVGKL----KRALRLE 318
             Q     A V      +   H  ++       + Y      E  + +L    +    L+
Sbjct: 241 YRQGNF-PASVEAYAAVEQQNHAYLSMVGEKLYDAYAAQGKPEEGLNRLIGYMQTFPELD 299

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL-AQIEQANS---H 373
            IN    +SL++  +         +A   A+  ++  P    ++ LL  +I   +     
Sbjct: 300 LINVVYEKSLLLRGE--------KEAAQTAIELVRRKPDLNGVYRLLGLRISDMDPTWKA 351

Query: 374 NTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
           + D +       L      ++   + +  S    W    P       F
Sbjct: 352 DADMMRSVVGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACSKWQTF 395


>gi|260793011|ref|XP_002591507.1| hypothetical protein BRAFLDRAFT_105273 [Branchiostoma floridae]
 gi|229276713|gb|EEN47518.1| hypothetical protein BRAFLDRAFT_105273 [Branchiostoma floridae]
          Length = 921

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 72/243 (29%), Gaps = 45/243 (18%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPAT----- 152
               A   +     +    NE +  L ++  AL     Y  A    E  +Q         
Sbjct: 420 EYRKAIGYYKDALTEVEDDNEKITLLHDLGYALCSVGDYENAIIHFEDAVQKREAIQCNV 479

Query: 153 --REFA-VYSLYFESCRIGDLNSAQRYATKALDI----------SPDAPWVTEAVVQQYV 199
                  +Y L      +G  + A  Y  +AL +           PD     EA+ + Y 
Sbjct: 480 TPDFAGSLYLLGKAWANLGHYSKAIGYYDQALQMYRGLGDQDTQHPDIAASLEALGEAYS 539

Query: 200 LAKEWSRAITFLNQKKK--------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
              ++ R+ + + Q  +         A   +   A  L +        GD   +     +
Sbjct: 540 HIGDYRRSFSNIEQAMEMFMNVYGEAAFRAHPRIATCLGSLGGVLLSLGDYQKALRYFKK 599

Query: 252 SLKLC----------DNSIMASICAAKSLISQNKKRKAEVILEKIWK--------VNPHP 293
           +L++                A +  A S       RKA    E+  +          PHP
Sbjct: 600 ALQMERSIYGQSTAHPKIATALLNLATSWGKLGDHRKAIDYTEQALQMLRSIHGMTTPHP 659

Query: 294 EIA 296
           +IA
Sbjct: 660 DIA 662


>gi|187934372|ref|YP_001886178.1| tetratricopeptide repeat domain protein [Clostridium botulinum B
           str. Eklund 17B]
 gi|187722525|gb|ACD23746.1| tetratricopeptide repeat domain protein [Clostridium botulinum B
           str. Eklund 17B]
          Length = 359

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 27/83 (32%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             I   E+ YN A E    +L        A+  L       G+       A KA D +P 
Sbjct: 245 ANILRREKDYNSARENFNTVLNKENDNAGALRGLAIVEMLEGNKEEGVSLAKKAYDANPQ 304

Query: 187 APWVTEAVVQQYVLAKEWSRAIT 209
             +V E ++       +   A  
Sbjct: 305 ETYVLETLIIALTENGQGDEAEK 327


>gi|162457641|ref|YP_001620008.1| cellulose synthase 1 operon protein C precursor [Sorangium cellulosum
            'So ce 56']
 gi|161168223|emb|CAN99528.1| Cellulose synthase 1 operon protein C precursor [Sorangium cellulosum
            'So ce 56']
          Length = 2239

 Score = 44.9 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 55/196 (28%), Gaps = 4/196 (2%)

Query: 103  ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL---EMMLQIP-ATREFAVY 158
            AR +                 L   + A            L     +   P   R   + 
Sbjct: 1011 ARAVEEIEKILAIDPERRAAILALQRNAARAGDAQRLARALCAEAELTSSPREQRRLLLR 1070

Query: 159  SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +      R+GD + A     +AL I P  P    A V+    A  +  A   L +  +  
Sbjct: 1071 AADVTELRLGDRDRASSLVDRALAIDPADPDALRARVRLDERAGRYEEARRALLKLIQRD 1130

Query: 219  KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
               +   ++ L    L+        ++     E+ +      +  I  A+ L       K
Sbjct: 1131 PAGDAAFSLWLEVAGLDERRLKRPHSAVESYREAARKRPAHPLPRIEIARLLRETGNYEK 1190

Query: 279  AEVILEKIWKVNPHPE 294
               +L  +      P+
Sbjct: 1191 LVEVLSSLADEAQRPD 1206


>gi|270635416|ref|ZP_06222086.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae
           HK1212]
 gi|270317407|gb|EFA28919.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae
           HK1212]
          Length = 142

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
             + ++  Y   KEW +A+    +  K   + N            ++ +    +      
Sbjct: 26  ALQQLLVIYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVL 85

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            ++L +    + AS+  A   +   + ++A  ILE + + NP
Sbjct: 86  QKALSVSPTCVRASLLLANLAMLDGQYQQAVKILENVLEQNP 127



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP---EIANIYTH----LLSENTVGKLKRALRLEEIN 321
                 + +KA  I EK+ K+ P     E+A  Y      L  E+ V K     +   ++
Sbjct: 33  IYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVS 92

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              V + ++++ +A+  G   QA       ++  P 
Sbjct: 93  PTCVRASLLLANLAMLDGQYQQAVKILENVLEQNPD 128


>gi|254475223|ref|ZP_05088609.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
 gi|214029466|gb|EEB70301.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
          Length = 657

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+GD   A     +AL ++P  P    A+ Q YV   EW  A+  L+Q         + 
Sbjct: 327 ERLGDEKQAIENYHRALQLNPHLPEAHNALAQYYVRQGEWENALAHLDQAVFTVPTRAKA 386

Query: 225 RAILLIARSLENADKGDMIASYHD 248
            A +   R+    + G+  A++ +
Sbjct: 387 -ASVAGWRANVLFNMGEGSAAFRE 409



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 20/140 (14%)

Query: 272 SQNKKRKAEVILEKIW-----------KVNPHPEIANIYTHLLSEN-TVGKLKRALRLEE 319
           +  ++R+A+V LE                  H  +   Y  L  E   +    RAL+L  
Sbjct: 288 ALGREREAKVALEAALLEPTFANSSELASQCHKNLGTSYERLGDEKQAIENYHRALQL-- 345

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANSHNT 375
            N    E+   +++  +  G  + A A    A+   P       +    A +       +
Sbjct: 346 -NPHLPEAHNALAQYYVRQGEWENALAHLDQAVFTVPTRAKAASVAGWRANVLFNMGEGS 404

Query: 376 DKILYWTQSALHAMPDPLWI 395
                       A  +P WI
Sbjct: 405 AAFREINALLAQADYEP-WI 423


>gi|213404832|ref|XP_002173188.1| anaphase-promoting complex subunit Apc3 [Schizosaccharomyces
           japonicus yFS275]
 gi|212001235|gb|EEB06895.1| anaphase-promoting complex subunit Apc3 [Schizosaccharomyces
           japonicus yFS275]
          Length = 669

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 98/327 (29%), Gaps = 79/327 (24%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLE--VQI--ALAERQYNIAHEKLEMM-LQIPATRE-FAV 157
           +K             EY++ +L+   Q   ALA+     A +  + + L    +    A 
Sbjct: 313 KKAIRSEQAARPTDEEYIITILKLIAQGCYALAQYDLPEALKCFQALPLAEQNSSFILAK 372

Query: 158 YSL-------------YFESCRIG------D---LNSAQ----------RYATKALDISP 185
             L             YFE  R G      D    ++A             A +AL++ P
Sbjct: 373 LGLVYFELVQYDKAVFYFEKLRRGYPARIEDMEVYSTALWHLQKKVELSYLAHEALELHP 432

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            AP     +   + L +E S+A+  + +  +    +          +  E +   +   +
Sbjct: 433 YAPQSWCILANCFSLQREHSQALKCITRAIQLDSTFE----YAYTLQGHEYSANEEYEKA 488

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                 ++++      A        +   +  +A+   +K  ++NPH  +      ++ E
Sbjct: 489 KTSFRRAIRINIRHYNAWYGIGMVYLKTGRNDQADFHFKKAAEINPHNSVLMTCIGMIYE 548

Query: 306 ---------------------NTVGKLKRALRLEEIN----------------KESVESL 328
                                +++ + K+A  L  +                  +     
Sbjct: 549 RMKKFTYALEYYRRACVLDEKSSLARFKKAKVLVSLREYSKALEELEALKVLAPDEANVH 608

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355
            ++ K+   M     A     +A  + 
Sbjct: 609 FLLGKLYKRMKKRSLAMRHLTIAWNLD 635


>gi|207727839|ref|YP_002256233.1| hypothetical protein RSMK04163 [Ralstonia solanacearum MolK2]
 gi|206591080|emb|CAQ56692.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 641

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 10/228 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             + A   A   ++++P +    +      V   +WS     L  +        R  AIL
Sbjct: 137 APSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRADAIL 196

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIW 287
            + + +      D + +   A++ L + D     +  A A++ +       A   L+   
Sbjct: 197 QLQQQMSK--SNDPVGAV-SALQRLTVHDAQRPETHLALARAKVVAKDNTGALSELDTSL 253

Query: 288 KVNP-HPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           ++ P + + A +   L +++     +       +    S++  + ++++ L     DQA 
Sbjct: 254 RLRPGYEDAAILAAELRADSNPDAAIAGLRTFLKAAPASLDGHLALARLYLVNNQNDQAR 313

Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY---WTQSALHAM 389
           A+     KIAP    I L L  +            Y   +   A  + 
Sbjct: 314 AQFEAIRKIAPNDARIPLALGLLNLQQRQYDAAERYLKEYIAQAAKSP 361



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 65/173 (37%), Gaps = 13/173 (7%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L Q  ++ +   R   I  + R+           +   A   ++L   S+ A       +
Sbjct: 115 LAQDTRDPRFAQRATEIAFLTRA--------PSQALTAARLWVELAPTSMPARQVQQLLM 166

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
           ++  +  + E +L+         + A+    L      S + VG +    RL   + +  
Sbjct: 167 VATGQWSEVEPMLQAQLNKVSPGQRADAILQLQQQMSKSNDPVGAVSALQRLTVHDAQRP 226

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           E+ + +++  +       A ++   ++++ P  E   +LA   +A+S+    I
Sbjct: 227 ETHLALARAKVVAKDNTGALSELDTSLRLRPGYEDAAILAAELRADSNPDAAI 279


>gi|168031095|ref|XP_001768057.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680695|gb|EDQ67129.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 523

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 9/96 (9%)

Query: 400 YLSSVWLPLSPIS--------KTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSM 451
           + ++   P+SP +         ++  F +  P ++PE     +  +      P  +L   
Sbjct: 281 HPAAGVSPVSPCTPPDLVSALGSVDSFSFSGPPQTPESPEVSHQPYVAPKKIPGHELLGP 340

Query: 452 LNNGKKNHLPSIKKVSSFE-DSTIHPLDPHIRQPDD 486
                K   PS+    S E D+   P     R  DD
Sbjct: 341 FMAMSKPSAPSVSPEGSHEVDAVSSPAVDDSRSYDD 376


>gi|307354797|ref|YP_003895848.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM
           11571]
 gi|307158030|gb|ADN37410.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM
           11571]
          Length = 253

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 9/163 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
              Y  A E +   L   A           +      +GD   A   A  A +I P+  W
Sbjct: 50  SGDYEAALEAINKSLAEEANFALGYATKSGIL---YVMGDFTGALEAADTATEIQPEQAW 106

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              +     +  + +  A+   +   + +    +   A +    +L     G    S   
Sbjct: 107 GWISKSNALLALERYDEALEAADTAIEIDPNNADYVNAYINKGTALILL--GRYEESIEA 164

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           + ++++L    I   I    +L    +  +   +  K  +++P
Sbjct: 165 SDKAIELSPTVIEGYINKGNALEYLGRYAEELEVCNKALEIDP 207


>gi|188997368|ref|YP_001931619.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932435|gb|ACD67065.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 329

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 29/226 (12%)

Query: 158 YSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-----AIT 209
           Y L  ++       +   A     +A+ + P+ P V     +  V   + ++     AI 
Sbjct: 8   YHLLNKAIYHYENENFEMAITLLDEAILLDPEIPEVH--YWRGKVATHDLNQESLEVAIV 65

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L++  +   ++    A     R      KG+   +  D  ++++L      A    A+ 
Sbjct: 66  ELSEAIRLKPDY----ADAYFERGRVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQI 121

Query: 270 LISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEIN 321
            +      KA   LEK+     H E        +  I+ +         +++  R  E N
Sbjct: 122 ELISGNDEKAMKYLEKV----SHQEGDDRYYYSLGKIFYNAGKYQPA--IEQFNRTIEKN 175

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQ 366
           K  V++ V  +     +G+  +A      A+ + P +  + + +A+
Sbjct: 176 KYFVDAYVYKAHALANIGNYQEAIENLKKAIILVPEEISYFIDMAK 221



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
            +  +  ++     ++ ++ G  ++A      A+++ P+ KE + LLAQIE  + ++   
Sbjct: 72  RLKPDYADAYFERGRVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQIELISGNDEKA 131

Query: 378 ILY 380
           + Y
Sbjct: 132 MKY 134


>gi|113476143|ref|YP_722204.1| hypothetical protein Tery_2526 [Trichodesmium erythraeum IMS101]
 gi|110167191|gb|ABG51731.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1154

 Score = 44.9 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD  +A  Y  +AL I+P+  ++ E +    +L  ++ +AI    +  K   +     
Sbjct: 529 EKGDREAAVNYYNQALKINPELKFLHEKLANNLLLKGDYDQAIIHYQEAIKYNPKSYDAY 588

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--LISQNKKRKAEVIL 283
           A L  A S    +KG +  +     ++L+L  +    +   ++   +I Q K  +A  + 
Sbjct: 589 ANLGTALS----NKGLLALALEKYYKALELKPSW---AEVYSRIGHIIKQEKMEEAIALF 641

Query: 284 EKIWKVNP 291
           EK  ++ P
Sbjct: 642 EKAIELKP 649



 Score = 43.8 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 59/182 (32%), Gaps = 12/182 (6%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +   +A+++  D       +        +   A+ + NQ  K   E       L    
Sbjct: 502 AIKSYERAINLKQDYTEAYSNLANILGEKGDREAAVNYYNQALKINPELK----FLHEKL 557

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NP 291
           +     KGD   +     E++K    S  A      +L ++     A   LEK +K    
Sbjct: 558 ANNLLLKGDYDQAIIHYQEAIKYNPKSYDAYANLGTALSNKGLLALA---LEKYYKALEL 614

Query: 292 HPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            P  A +Y+     +  E     +    +  E+  + VE+   +  +      +  A   
Sbjct: 615 KPSWAEVYSRIGHIIKQEKMEEAIALFEKAIELKPQFVEAHQQLCDLLSHTTKLAVARKA 674

Query: 348 AM 349
           A 
Sbjct: 675 AD 676



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 63/200 (31%), Gaps = 13/200 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + + G+L SA     +AL I PD       +   +        A+       +   E + 
Sbjct: 355 ALKQGNLASAIASCKQALKIQPDHSPSYVILGNAFYQQNNLEAAL----HAYRQGLEIDP 410

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A +           G    +     +++ L            K      K  +A    
Sbjct: 411 ELAEVQGNIGSVYLQLGQYKQALFHYQKAIDLKPGLAGIYWNIGKLFQCLGKVDEAINAW 470

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLVIVSKIAL 336
            K  ++   P+I     H    NT+ KL R         R   + ++  E+   ++ I  
Sbjct: 471 SKALEIQ--PDIVEADFHFKLGNTLVKLSRINDAIKSYERAINLKQDYTEAYSNLANILG 528

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
           E G  + A      A+KI P
Sbjct: 529 EKGDREAAVNYYNQALKINP 548


>gi|254569410|ref|XP_002491815.1| Component (70 kDa) of the TOM (translocase of outer membrane)
           complex [Pichia pastoris GS115]
 gi|238031612|emb|CAY69535.1| Component (70 kDa) of the TOM (translocase of outer membrane)
           complex [Pichia pastoris GS115]
 gi|328351685|emb|CCA38084.1| similar to outer mitochondrial membrane translocase [Pichia
           pastoris CBS 7435]
          Length = 605

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 79/219 (36%), Gaps = 14/219 (6%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           N+  +Y    Q++        A E  E   ++     +A   L   S R G +  A    
Sbjct: 380 NDPDIYYQRGQLSYLRGDLANASENFETCKRLNPKNVYAYIQLACISYREGKIEEAVERF 439

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLE 235
            +A    P +P V     +  V   +   AI   +   K + +       A+ ++ ++  
Sbjct: 440 VQAKRTFPTSPEVPNYYGEILVDKNDTEDAIKQFDIAIKLQRSLSTVSIGALGILNKATI 499

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-- 293
            A + +   +     E++++   S +A++  A+  +  N+  +A V+ EK  K+   P  
Sbjct: 500 LARRNEFPQAIELLEEAIQVDPKSELAAVQLAQIKLQLNQAEEAIVLFEKTAKLARSPEE 559

Query: 294 --------EIANIYTHLLSENTVGKLKRALRLEEINKES 324
                   E A I   +  +  +   KR   +    +  
Sbjct: 560 KQHAISFAEAAKIQARVKKDPALS--KRVEEIIAQAQGH 596


>gi|146421989|ref|XP_001486937.1| hypothetical protein PGUG_00314 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 659

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 81/257 (31%), Gaps = 22/257 (8%)

Query: 135 QYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
            +  +      +  I  TR          ++ L+ +     DL      A +  ++   +
Sbjct: 392 NHRQSEHYFVQLRSIDRTRLEDMEYYLTLLWHLHKKV----DLT---YLADELHEVDAKS 444

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P     V   + L ++   AI+  N+  +     +R        +  E     +   +  
Sbjct: 445 PITWCVVGNLFSLNRDTDDAISCFNKAIR----ADRKFTYAYTLKGHEYFGNDNYEMALE 500

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           +   SL +      A        I+    ++A+    K   +NP   I      ++ E  
Sbjct: 501 NFRTSLLIDPRHYNALYGIGMVYINLGDFQRADYHFRKAVSINPINIILICCMGMVLEKV 560

Query: 308 VGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
             +   L++     ++   +   +   +++   M    QA A   +   +AP    +  L
Sbjct: 561 GKRHLALRQYELATKLQPNNPLPIFKKAQLLFTMQQYSQALAAFEILRDLAPDEASVRFL 620

Query: 364 LAQIEQANSHNTDKILY 380
           L Q+    +     +  
Sbjct: 621 LGQLYNIQNEKAKAVRE 637


>gi|15606362|ref|NP_213741.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5]
 gi|12230801|sp|O67178|Y1088_AQUAE RecName: Full=Uncharacterized protein aq_1088
 gi|2983568|gb|AAC07141.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5]
          Length = 761

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 86  KALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + L   GL+      +  A ++     +     +  L   L   +  ++ +   A    E
Sbjct: 70  QGLSDLGLLYFFLGRVEDAERVLKKALKFSDVDD-ALYARLGA-LYYSQGKLEEAQHYWE 127

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             L +   +   +Y+L       G+L  A     +AL + PD     E
Sbjct: 128 RALSLNPNKVEILYNLGVLHLNKGELEKALDLFERALRLKPDFREAEE 175


>gi|299136784|ref|ZP_07029967.1| TPR domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298601299|gb|EFI57454.1| TPR domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 444

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 87/253 (34%), Gaps = 18/253 (7%)

Query: 110 VSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
           ++   T     +   LL+ +    E+ +    +   +    P  R  A+ +L        
Sbjct: 101 ITADATLGEPRVALGLLDARAGRLEKAHQELQDAAALTSAAPELRGRALRALASMDQSSH 160

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             ++A+     A+ ++ +A   T A       A +   A T   +    A +     A+ 
Sbjct: 161 -PDAARDELLAAVKLTGEASSDTLATADLAARAGDNDDAETEFRRAI--AADPQNIDAVA 217

Query: 229 LIARSLENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            +A  L    K +   +    A+++       +      A   +S++K ++A  ++E++ 
Sbjct: 218 GLAHVLVQEKKSEEAETVLTSALKAHPNDPRLVS---QLASVYVSEDKAQQAIPLVEQMR 274

Query: 288 KVNPH--------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +P           +A +Y   ++       K    L + N +    L  ++   ++  
Sbjct: 275 AADPQLAADDSTTRLLARLY--GMNGQFEDSEKIYKTLVDRNPKDPSLLDDLADAFIQQQ 332

Query: 340 SIDQAHAKAMLAM 352
              +A      A+
Sbjct: 333 HYPEAQVLLEKAV 345


>gi|260462445|ref|ZP_05810652.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
 gi|259031641|gb|EEW32910.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
          Length = 593

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 27/242 (11%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                    ++  +   T +       +      GD   A  +  KA    P++     A
Sbjct: 329 DRAEQARTFQVPWESLETWQLVRRGRWHMNRRTRGDTEIALEFFEKAYREDPNSS----A 384

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD--------KGDMIAS 245
           V+ +      W   + F +    +  +    +A+L+ +               +G   ++
Sbjct: 385 VLNELAWWYFWRAWLRFGDSDDLDKVKQYSRKALLMDSLDARPHAHLGVMDIMRGRPASA 444

Query: 246 YHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEKIWKVNP------HP--EI 295
                E+L +  +   A  ++ +A+ L+       A     +  +++P      H   E+
Sbjct: 445 VDHLEEALHINPSFAFAHSAMGSARLLL--GDAAGAIPFFVETERLSPFDLYRFHNLGEL 502

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A  Y+ L  E+    +  A R  +++     S  +        G   +A  +  + M   
Sbjct: 503 AAAYSFL--EDWPSAISTADRSLDLSPGYFYSRFLKIGALARSGRKQEAMRELAILMTRH 560

Query: 356 PR 357
           P 
Sbjct: 561 PD 562



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 5/132 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNR 225
            G   SA  +  +AL I+P   +   A+    +L  + + AI F    ++ +  +  R  
Sbjct: 438 RGRPASAVDHLEEALHINPSFAFAHSAMGSARLLLGDAAGAIPFFVETERLSPFDLYRFH 497

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +  +A +    +  D  ++   A  SL L      +      +L    +K++A    E 
Sbjct: 498 NLGELAAAYSFLE--DWPSAISTADRSLDLSPGYFYSRFLKIGALARSGRKQEAMR--EL 553

Query: 286 IWKVNPHPEIAN 297
              +  HP+ + 
Sbjct: 554 AILMTRHPDFSE 565


>gi|302878311|ref|YP_003846875.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302581100|gb|ADL55111.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
          Length = 961

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 87/298 (29%), Gaps = 48/298 (16%)

Query: 97  AHNIPLARKMHSYVSQQHTFHN--EYLVYLL------------EVQIA------------ 130
           A  +  AR+M +   QQ    +  E L   L              + A            
Sbjct: 86  AGQLEEARQMLALARQQGLQGDDVEELALRLNRAVSQADAGLPAARAAHPDIDQIDALVA 145

Query: 131 -LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                Q   A ++   M        F   +L     + G++ +A      A  +SP    
Sbjct: 146 LFNRGQLEEAEKRARAMTVDYPLHAFGWKALGAVYQQHGNIEAALVPMETAASLSPGDVE 205

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y        A     Q  +    +    A       +     GD   +    
Sbjct: 206 AHYNLGITYQDLGRLDEACHCYRQAVQINPHY----AEAHSNLGVILQGLGDREEAEQCY 261

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
             +L++      A    A  L    +  +A      I K +  P+ A++  +L       
Sbjct: 262 RRALQIKPGYGAALSNLANLLQMLGRLDEAAACCRTILKSS--PDSADVLFNL-----AN 314

Query: 310 KLKRALRLE----------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            LKR  +L             N +SV+    +     E+G  ++A +    A++I P 
Sbjct: 315 ILKRLGQLAEAEASYRVALRFNPDSVQIHGNLGITLKELGRFEEAESSFRQALRINPD 372



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 90  TGLMSIAA-HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             L+++     +  A K    ++  +  H      L    +         A   +E    
Sbjct: 141 DALVALFNRGQLEEAEKRARAMTVDYPLHAFGWKAL--GAVYQQHGNIEAALVPMETAAS 198

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +      A Y+L      +G L+ A     +A+ I+P        +        +   A 
Sbjct: 199 LSPGDVEAHYNLGITYQDLGRLDEACHCYRQAVQINPHYAEAHSNLGVILQGLGDREEAE 258

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               +  +    +       L   +      G +  +       LK   +S       A 
Sbjct: 259 QCYRRALQIKPGY----GAALSNLANLLQMLGRLDEAAACCRTILKSSPDSADVLFNLAN 314

Query: 269 SLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
            L    +  +AE       + NP     H  +      L             +   IN +
Sbjct: 315 ILKRLGQLAEAEASYRVALRFNPDSVQIHGNLGITLKELGRFEEAE--SSFRQALRINPD 372

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             ++   +  +  E+  +D+A    + A+++AP 
Sbjct: 373 YAQAHCNLGVMFKELDRLDEAERCYLTALQLAPD 406


>gi|110598031|ref|ZP_01386311.1| TPR repeat:Peptidase S1C, HrtA/DegP2/Q/S [Chlorobium ferrooxidans
           DSM 13031]
 gi|110340379|gb|EAT58871.1| TPR repeat:Peptidase S1C, HrtA/DegP2/Q/S [Chlorobium ferrooxidans
           DSM 13031]
          Length = 535

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 60/189 (31%), Gaps = 4/189 (2%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +        A+K+ +Y       ++  L ++      +    Y  A      +++I    
Sbjct: 321 AAYGREGQKAKKIEAYKKAVRLNNDFALGWVNLANACVQNGDYEQAISSYMEVVRITPGD 380

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             + Y++       G    A     KA+ +SP        + Q Y +A +  + +    +
Sbjct: 381 ASSWYNMGHAYRDAGQFTKAVDAYRKAVTLSPANAQYLIKLGQAYGMAGQDVKQLEAYRK 440

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                  +      L +A +  + +           +++L +  N         ++ +  
Sbjct: 441 ALAVNPAYVDAWLYLGVAYNKSHLEN----EEREAYLKALVIDPNHNAILFNLGQNYLEH 496

Query: 274 NKKRKAEVI 282
             ++K   +
Sbjct: 497 GNRQKGMEV 505


>gi|88705304|ref|ZP_01103015.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88700394|gb|EAQ97502.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 742

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 80/243 (32%), Gaps = 24/243 (9%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             ++   + + GDL +A      A D    + W   A +++   +     ++        
Sbjct: 419 HRAVAMAALQRGDLRAAPTLLEIAKDGKESSIWRATA-LERASASGA-EGSLQIAQNLLI 476

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLIS 272
                 R  A+    R+++       +   + A+  L           +A   AA  L  
Sbjct: 477 ADDPLLRISAV----RAMQQL----PVTRRYLALAPLIKDPVTGVRMEVAMSLAAVPLDE 528

Query: 273 QNKKRKAEVI-LEKIWKV--NPHPEIANI------YTHLLSENTVGKLKRALRLEEINKE 323
            +  R+  ++ L   +K     H ++         +     +    +      L  +N +
Sbjct: 529 LSPARQQSLLTLFDEYKAVQRQHLDMPATSMQLGIFNATRGDFPAAESAYREALA-LNPQ 587

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
            + + + ++ +    G   +A  +   A+ + P+    +    + +A   N D+ L W  
Sbjct: 588 LISAYLNLADLLRGQGREAEARVQLEKALGVNPQSGDAMHALGLLEARGGNRDRALDWLG 647

Query: 384 SAL 386
            A 
Sbjct: 648 KAA 650



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 86/285 (30%), Gaps = 62/285 (21%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKAL- 181
           L   Q  L      +    +  M Q+P TR   A+  L  +      +  A   A   L 
Sbjct: 468 LQIAQNLLIADDPLLRISAVRAMQQLPVTRRYLALAPLIKDPVTGVRMEVAMSLAAVPLD 527

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           ++SP        +  +Y            + ++  +    +    I        NA +GD
Sbjct: 528 ELSPARQQSLLTLFDEY----------KAVQRQHLDMPATSMQLGIF-------NATRGD 570

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEI 295
             A+     E+L L    I A +  A  L  Q ++ +A V LEK   VNP      H   
Sbjct: 571 FPAAESAYREALALNPQLISAYLNLADLLRGQGREAEARVQLEKALGVNPQSGDAMH--- 627

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESL------------------------ 328
           A           +  +  L +A  LE                                  
Sbjct: 628 ALGLLEARGGNRDRALDWLGKAAALETAGSRHRFVYGVAQHDFGDAPGALTTLGKLHSAL 687

Query: 329 -----VIVSKIALEM--GSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
                V+++ +      G  D A   A   + +AP+   +  LA 
Sbjct: 688 PADEQVLLALVNYSAELGKTDMARRYARKLLTLAPQNPNYQRLAA 732


>gi|330844325|ref|XP_003294080.1| hypothetical protein DICPUDRAFT_51299 [Dictyostelium purpureum]
 gi|325075516|gb|EGC29393.1| hypothetical protein DICPUDRAFT_51299 [Dictyostelium purpureum]
          Length = 935

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 25/217 (11%)

Query: 166 RIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            IGD+  A+     A   +P     W+  A ++  VLA + + A   + Q  K   E   
Sbjct: 267 EIGDIKKARLLFKSATTSNPKHAPGWIAAAKLE--VLAGKMADARRMIAQACKECPENEE 324

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                     +ENA+      +     +++ +  +S+   + AA     Q K +K   +L
Sbjct: 325 VW--------IENANLQTPDNAKIVLAQAVSIIPHSVKIWLYAANLE-KQLKMKK--RVL 373

Query: 284 EKIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +  +  P   ++      L   E+    L RA    E   ++V+  + ++     + + 
Sbjct: 374 RRALEFIPTSVKLWKEAVELEEPEDARILLGRA---VECVPDNVDLWLALA----NLETY 426

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDK 377
           ++A      A +  P   EI++  AQ+E++   N + 
Sbjct: 427 EKAREVLNKARQAIPSSPEIWISAAQLEESKGKNDNV 463



 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 9/154 (5%)

Query: 234 LENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +         S    +E + K C       +  AK         KA  IL K ++ NP 
Sbjct: 561 AQLEKAHGTKESLDQTLEKATKSCPQFENLWLMYAKEKWISGDVIKAREILAKAFQSNPG 620

Query: 293 PE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            E I      + SE  +  LK A  L +  +   ++  I  K AL    + +        
Sbjct: 621 SENIWVAAAKIESE--MNDLKAARTLLKKARVVADTERIWMKSALLERELGKDSESEGTL 678

Query: 352 MKIA----PRKEIFLLL-AQIEQANSHNTDKILY 380
           ++ A    P      L+ AQ+E+    + + I  
Sbjct: 679 IQDALVKYPSSFKLWLMKAQLEERLKKDIETIRQ 712


>gi|301614638|ref|XP_002936805.1| PREDICTED: tetratricopeptide repeat protein 21B-like [Xenopus
           (Silurana) tropicalis]
          Length = 1320

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 17/176 (9%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176
            L+ L+      +        E    M ++  T       LYF       +G  + A+ Y
Sbjct: 77  SLMALIYAHKKSSHPDREAIQELDSKMKELRKT--AGHRGLYFAGLFLWHVGRHDKAREY 134

Query: 177 ATKALDISPDAPW--VTEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARS 233
             + + IS  +    V +A +      + +++ A+ +L +   +  +        ++ ++
Sbjct: 135 IDRMIKISNGSKEGLVLKAWLDLTCGREAYAKKALKYLEEGLADGTDV-----FAMLGKA 189

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK----KRKAEVILEK 285
                + +   +       L  C   I A I   K  ++          A  +L+K
Sbjct: 190 HYLEMRQNYSEALEVINRILVHCPGFIPALIKKMKLQLALQDWEQTVETALRLLQK 245


>gi|307726113|ref|YP_003909326.1| cellulose synthase operon C domain-containing protein [Burkholderia
           sp. CCGE1003]
 gi|307586638|gb|ADN60035.1| cellulose synthase operon C domain protein [Burkholderia sp.
           CCGE1003]
          Length = 1646

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 26/215 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G M +A H+   A + +    ++   + + +  L+    A        A +    +    
Sbjct: 407 GEMLLANHDAAGAEQAYRMALRRQADNPDAIRGLVGALAAQGRGD--EALQFANQLNAEQ 464

Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            ++      +      +        GDL SA+     AL  +PD PW+   + + YV   
Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-----------MIASYHDAIE 251
             + A + ++       +        L A +L +A+  D             A   DA+ 
Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQLERIPAAQRTDAMA 580

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           SL+        +  A +      + ++A   L   
Sbjct: 581 SLQHRLWVHQQAELATRM-AHAGQTQQALATLRAA 614



 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 90/324 (27%), Gaps = 46/324 (14%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-------LEVQ--IALAERQYN 137
           ALY   +  A+ +  +  +  S V Q                   L      AL      
Sbjct: 246 ALYQAYLQGASDDAAVKARFDSMVQQDKAARERAQENASVDARGRLIADGFAALDHDDPA 305

Query: 138 IAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW------ 189
            A  K   +L      T       +   + +      A+ Y  +A      A W      
Sbjct: 306 SARAKFSSVLANSPNDTDALGGMGIA--ALKQEHFAEARNYLERASRNGNPARWKTALDS 363

Query: 190 ------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                  ++A +       E+++A     +        +    +LL    L N D     
Sbjct: 364 ATYWTYTSDA-IGARS-NGEFAKAKALFERAIALNP-SDVTAQVLLGEMLLANHDAAGAE 420

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +Y  A+       ++I   + A  +    ++  +    L    +       A     L 
Sbjct: 421 QAYRMALRRQADNPDAIRGLVGALAAQGRGDEALQFANQLNAEQQSK-----AGGINRLR 475

Query: 304 SENTVGK---------LKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAML 350
            E    +         L  A  L E       +     + +++I +  G++  A +    
Sbjct: 476 GEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQGAVANARSMMDG 535

Query: 351 AMKIAPRKEIFLLLAQIEQANSHN 374
            +   P     L  + +  A + +
Sbjct: 536 LLAAHPDMTDALYASALLSAETQD 559



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 65/228 (28%), Gaps = 40/228 (17%)

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKAL--------DISPDAPWVT 191
           E  + +   P   + A   L   +     D   A  YA             I+       
Sbjct: 160 EYYQALSATPQGWDQARRGLEQLARDNPDDPRYALAYAQHLTYRDVTRRDGIARLQKLAG 219

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++ V      K W +A+ +L        +   + A L  A     +D   + A +   ++
Sbjct: 220 DSTVGA-SAKKSWRQALLWL--------DARPSDAALYQAYLQGASDDAAVKARFDSMVQ 270

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
             K           AA+    +N    A   L           IA+ +  L  ++     
Sbjct: 271 QDK-----------AARERAQENASVDARGRL-----------IADGFAALDHDDPASAR 308

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +   +   +    ++L  +   AL+     +A      A +      
Sbjct: 309 AKFSSVLANSPNDTDALGGMGIAALKQEHFAEARNYLERASRNGNPAR 356


>gi|150004611|ref|YP_001299355.1| hypothetical protein BVU_2068 [Bacteroides vulgatus ATCC 8482]
 gi|254883092|ref|ZP_05255802.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294776725|ref|ZP_06742189.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
 gi|319643612|ref|ZP_07998232.1| hypothetical protein HMPREF9011_03834 [Bacteroides sp. 3_1_40A]
 gi|149933035|gb|ABR39733.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254835885|gb|EET16194.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294449380|gb|EFG17916.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
 gi|317384781|gb|EFV65740.1| hypothetical protein HMPREF9011_03834 [Bacteroides sp. 3_1_40A]
          Length = 316

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 49/268 (18%)

Query: 99  NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +   A++M         F      ++E     L         + + A   L+ M      
Sbjct: 32  DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91

Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +     ++  + Y +     D  + +    KAL +    P       +  +  K+   AI
Sbjct: 92  QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +     +++     +    R+           +  D  + L L  +   A +   +
Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            L + N+                 PE A                   ++  +N  + ++ 
Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++  ++ L     D+A A    A++I P
Sbjct: 233 ILSGELYLVNKDFDKALAVYDEAIEINP 260


>gi|330443405|ref|NP_009469.2| Cdc27p [Saccharomyces cerevisiae S288c]
 gi|329136706|tpg|DAA07040.2| TPA: Cdc27p [Saccharomyces cerevisiae S288c]
          Length = 758

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 555 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 612

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 613 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 662

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 663 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 722

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 723 VGRKKDAIKELTVAMNLDP 741


>gi|282164220|ref|YP_003356605.1| hypothetical protein MCP_1550 [Methanocella paludicola SANAE]
 gi|282156534|dbj|BAI61622.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 1006

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 77/227 (33%), Gaps = 13/227 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A  +    + +      A Y+L     + G  + A R   +A+ + PD       +  
Sbjct: 224 DEAIREFREAVWLKPDDAEAHYNLGLALSKKGQYDQAIREYREAVRLKPDYAKAHNNLGI 283

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +   AI       +   +       L +A +  NA    +  +  +  +++KL 
Sbjct: 284 LLDYRGQLDEAIKEYYAAVRLRPDDPEAHYNLGVALASRNA----LDEAAQEFRDAVKLR 339

Query: 257 DNSIMASICAAKSLISQNKKRKAEVIL-EKIWK----VNPHPEIANIYTHL-LSENTVGK 310
                A          +    +A   L E IW        H  +  ++    L ++ + +
Sbjct: 340 PGYAEAHYKLGYVFCRKGMLDEAVKELREAIWLRPNYSEAHYNLGVVFGKKDLMDDAIRE 399

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           LK A+RL     E  E+   +       G +D A  +   A+++ P 
Sbjct: 400 LKDAIRL---RPEYAEAHYNLGLAFDYKGLLDDAIREYREAIRLKPD 443



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 71/190 (37%), Gaps = 7/190 (3%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A R  ++A+   PD       +   +        AI    +  +   ++    A   +
Sbjct: 54  DEAIREYSEAVRQKPDYAEAHYNLAVAFDDKGLLDDAIREFREAVRLNPDF--AEAHFNL 111

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
             +L+  DKG +  +  +  E+L+L  +   A      +L  +N+   A    +   +++
Sbjct: 112 GAALD--DKGLLDDAIMEYREALRLSPDFARAHYNMGIALGKRNQLDDAVKEFKDALRID 169

Query: 291 P-HPEIANIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P +PE+      +L +  +    +K       +  +  E+   +       G +D+A  +
Sbjct: 170 PDYPEVHYNMGVVLGKKGMLDEAIKEFREAIRLKADDAEAHYNLGVSLDYKGLVDEAIRE 229

Query: 348 AMLAMKIAPR 357
              A+ + P 
Sbjct: 230 FREAVWLKPD 239



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 73/230 (31%), Gaps = 19/230 (8%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A  +    ++       A Y+L       G L+ A R   +A+ ++PD       +  
Sbjct: 54  DEAIREYSEAVRQKPDYAEAHYNLAVAFDDKGLLDDAIREFREAVRLNPDFAEAHFNLGA 113

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                     AI    +  + + ++ R          +    +  +  +  +  ++L++ 
Sbjct: 114 ALDDKGLLDDAIMEYREALRLSPDFAR----AHYNMGIALGKRNQLDDAVKEFKDALRID 169

Query: 257 DNSIMASICAAKSLISQN-------KKRKAEVILEKIWKVNPHPEIANI--YTHLLSENT 307
            +           L  +        + R+A  +  K      H  +     Y  L+ E  
Sbjct: 170 PDYPEVHYNMGVVLGKKGMLDEAIKEFREAIRL--KADDAEAHYNLGVSLDYKGLVDEA- 226

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              ++       +  +  E+   +     + G  DQA  +   A+++ P 
Sbjct: 227 ---IREFREAVWLKPDDAEAHYNLGLALSKKGQYDQAIREYREAVRLKPD 273



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 59/196 (30%), Gaps = 11/196 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G L+ A +   +A+ +  D       +            AI    +      +     
Sbjct: 185 KKGMLDEAIKEFREAIRLKADDAEAHYNLGVSLDYKGLVDEAIREFREAVWLKPD----D 240

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A       L  + KG    +  +  E+++L  +   A       L  + +  +A      
Sbjct: 241 AEAHYNLGLALSKKGQYDQAIREYREAVRLKPDYAKAHNNLGILLDYRGQLDEAIKEYYA 300

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             ++ P     H  +        + +     +      ++     E+   +  +    G 
Sbjct: 301 AVRLRPDDPEAHYNLGVALASRNALDEAA--QEFRDAVKLRPGYAEAHYKLGYVFCRKGM 358

Query: 341 IDQAHAKAMLAMKIAP 356
           +D+A  +   A+ + P
Sbjct: 359 LDEAVKELREAIWLRP 374


>gi|281491675|ref|YP_003353655.1| TPR repeat-containing protein, Tetratricopeptide repeat family
           [Lactococcus lactis subsp. lactis KF147]
 gi|281375393|gb|ADA64906.1| TPR repeat-containing protein, Tetratricopeptide repeat family
           [Lactococcus lactis subsp. lactis KF147]
          Length = 418

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 23/198 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154
            +   A  +      +    +  + + L  +    +  Y+ A  +   + +      T+ 
Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAI 208
               S+Y    RIGD  +       A   L+ S +     E + +    Y      +RAI
Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAI 223

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               + +K   E+        +A +       +  A+   A + +K   N++     A+K
Sbjct: 224 ANFKRLEKMDVEFLNYE----LAYAQTLEANQEFEAALEMAKKGMKKNPNAVPLLHFASK 279

Query: 269 SLISQNKKRKAEVILEKI 286
                  K  AE  L   
Sbjct: 280 ISFKLKDKAAAERYLMDA 297


>gi|259144761|emb|CAY77700.1| Cdc27p [Saccharomyces cerevisiae EC1118]
          Length = 751

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 548 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 605

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 606 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 655

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 656 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 715

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 716 VGRKKDAIKELTVAMNLDP 734


>gi|256273893|gb|EEU08813.1| Cdc27p [Saccharomyces cerevisiae JAY291]
          Length = 322

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 119 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 176

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 177 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 226

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 227 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 286

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 287 VGRKKDAIKELTVAMNLDP 305


>gi|254492569|ref|ZP_05105741.1| hypothetical protein MDMS009_2911 [Methylophaga thiooxidans DMS010]
 gi|224462461|gb|EEF78738.1| hypothetical protein MDMS009_2911 [Methylophaga thiooxydans DMS010]
          Length = 532

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 68/234 (29%), Gaps = 14/234 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAP 188
           AL   Q  +A    + ML+        +++LY  +         A     KAL I P+  
Sbjct: 21  ALNTGQLGVAESTAKKMLKQFPNAFV-LHNLYGNALAGQNKFKDAVDAFRKALKIDPNVA 79

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +   V            AI    +              L  A   +   +     +   
Sbjct: 80  ELHFNVGILLTNLNRTEEAINSYRKAVSLKSSLVDAHYNLGAAYQSQQQFE----KAGKS 135

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303
             ++++L      A       L  Q +  +A     K   V    + A  + +L      
Sbjct: 136 YQKAVELQPGFYEAMANLGVVLQEQGRLEEAVEAYNKALAVQ---QDAQTFFNLGTALKN 192

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                  +    +   IN +  E    + ++  + G  D++      A+ + P 
Sbjct: 193 QGKLGDAIDAYNQALVINPDYAEVHSNIGEVLRDQGRYDESVKAYKQALTLDPD 246


>gi|207347913|gb|EDZ73938.1| YBL084Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 253

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 50  DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 107

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 108 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 157

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 158 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 217

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 218 VGRKKDAIKELTVAMNLDP 236


>gi|190408903|gb|EDV12168.1| anaphase promoting complex subunit CDC27 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 752

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 549 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 606

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 607 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 656

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 657 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 716

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 717 VGRKKDAIKELTVAMNLDP 735


>gi|151946316|gb|EDN64538.1| anaphase promoting complex (APC) subunit [Saccharomyces cerevisiae
           YJM789]
          Length = 749

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 546 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 603

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 604 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 653

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 654 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 713

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 714 VGRKKDAIKELTVAMNLDP 732


>gi|496695|emb|CAA56022.1| CDC27 D-618 protein [Saccharomyces cerevisiae]
          Length = 618

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 415 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 472

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 473 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 522

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 523 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 582

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 583 VGRKKDAIKELTVAMNLDP 601


>gi|584897|sp|P38042|CDC27_YEAST RecName: Full=Anaphase-promoting complex subunit CDC27; AltName:
           Full=Anaphase-promoting complex subunit 3; AltName:
           Full=Cell division control protein 27
 gi|536136|emb|CAA84905.1| CDC27 [Saccharomyces cerevisiae]
          Length = 758

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A K     +Q     N    Y L+     +    + A       L        A Y
Sbjct: 555 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 612

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   + ++G    A  Y  KA  I+P        V+           ++  L  K+K  
Sbjct: 613 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 662

Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + +    +      L    +            +     E +KL  +   A     ++   
Sbjct: 663 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 722

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +K+ A   L     ++P
Sbjct: 723 VGRKKDAIKELTVAMNLDP 741


>gi|15641914|ref|NP_231546.1| tetratricopeptide repeat protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121591427|ref|ZP_01678706.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727139|ref|ZP_01680313.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675765|ref|YP_001217445.1| tetratricopeptide repeat protein [Vibrio cholerae O395]
 gi|153217631|ref|ZP_01951312.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153819858|ref|ZP_01972525.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153824009|ref|ZP_01976676.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825232|ref|ZP_01977899.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153831378|ref|ZP_01984045.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227082042|ref|YP_002810593.1| hypothetical protein VCM66_1836 [Vibrio cholerae M66-2]
 gi|229507992|ref|ZP_04397497.1| hypothetical protein VCF_003224 [Vibrio cholerae BX 330286]
 gi|229511770|ref|ZP_04401249.1| hypothetical protein VCE_003179 [Vibrio cholerae B33]
 gi|229515298|ref|ZP_04404758.1| hypothetical protein VCB_002955 [Vibrio cholerae TMA 21]
 gi|229518908|ref|ZP_04408351.1| hypothetical protein VCC_002935 [Vibrio cholerae RC9]
 gi|229521834|ref|ZP_04411251.1| hypothetical protein VIF_002371 [Vibrio cholerae TM 11079-80]
 gi|229523932|ref|ZP_04413337.1| hypothetical protein VCA_001511 [Vibrio cholerae bv. albensis
           VL426]
 gi|229529062|ref|ZP_04418452.1| hypothetical protein VCG_002155 [Vibrio cholerae 12129(1)]
 gi|229607538|ref|YP_002878186.1| tetratricopeptide repeat protein [Vibrio cholerae MJ-1236]
 gi|254849000|ref|ZP_05238350.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255745329|ref|ZP_05419278.1| hypothetical protein VCH_001677 [Vibrio cholera CIRS 101]
 gi|262153567|ref|ZP_06028696.1| putative heat shock protein [Vibrio cholerae INDRE 91/1]
 gi|262167467|ref|ZP_06035174.1| putative heat shock protein [Vibrio cholerae RC27]
 gi|297579429|ref|ZP_06941357.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298498051|ref|ZP_07007858.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9656447|gb|AAF95060.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546722|gb|EAX56898.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630517|gb|EAX62909.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124113425|gb|EAY32245.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|126509588|gb|EAZ72182.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126518467|gb|EAZ75690.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317648|gb|ABQ22187.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148873140|gb|EDL71275.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149741211|gb|EDM55262.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227009930|gb|ACP06142.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227013810|gb|ACP10020.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229332836|gb|EEN98322.1| hypothetical protein VCG_002155 [Vibrio cholerae 12129(1)]
 gi|229337513|gb|EEO02530.1| hypothetical protein VCA_001511 [Vibrio cholerae bv. albensis
           VL426]
 gi|229340759|gb|EEO05764.1| hypothetical protein VIF_002371 [Vibrio cholerae TM 11079-80]
 gi|229343597|gb|EEO08572.1| hypothetical protein VCC_002935 [Vibrio cholerae RC9]
 gi|229348003|gb|EEO12962.1| hypothetical protein VCB_002955 [Vibrio cholerae TMA 21]
 gi|229351735|gb|EEO16676.1| hypothetical protein VCE_003179 [Vibrio cholerae B33]
 gi|229355497|gb|EEO20418.1| hypothetical protein VCF_003224 [Vibrio cholerae BX 330286]
 gi|229370193|gb|ACQ60616.1| hypothetical protein VCD_002450 [Vibrio cholerae MJ-1236]
 gi|254844705|gb|EET23119.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255737159|gb|EET92555.1| hypothetical protein VCH_001677 [Vibrio cholera CIRS 101]
 gi|262024164|gb|EEY42858.1| putative heat shock protein [Vibrio cholerae RC27]
 gi|262030694|gb|EEY49329.1| putative heat shock protein [Vibrio cholerae INDRE 91/1]
 gi|297537023|gb|EFH75856.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297542384|gb|EFH78434.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327484456|gb|AEA78863.1| Heat shock (predicted periplasmic) protein YciM, precursor [Vibrio
           cholerae LMA3894-4]
          Length = 389

 Score = 44.9 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 101/342 (29%), Gaps = 65/342 (19%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + L      +  +     + A +  E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFEQLIDEPEHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +   Y   +EW +AI       
Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIECATALV 168

Query: 216 KNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  ++    N A      ++      +   +     ++L+     + A+I   K  +   
Sbjct: 169 KLGRKRMKVNIAHFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNE 228

Query: 275 KKRKAEVILEKIWKVNPHPE----------IANIYTHL-LSENTVGKLKRALRLEEINKE 323
             +K    LE + +     +          +A  Y HL   ++ +  L+R +     NK 
Sbjct: 229 DYQKTIDHLEMVLEQ----DIDFIGEVLNTLAECYHHLGREQDLITFLRRCIA----NKA 280

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYW 381
            V + ++++++  +   I  A       +   P  + F  L    I +A        L  
Sbjct: 281 GVSAELMLAQLVAQHEGIAAAQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLST 340

Query: 382 TQSALHAMP--DPLWISDDGYLSSV---WLPLSPISKTLCYF 418
            Q  +       P +       S+    W    P  K     
Sbjct: 341 LQRLVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKNWGSI 380


>gi|328950327|ref|YP_004367662.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450651|gb|AEB11552.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 496

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 88/301 (29%), Gaps = 43/301 (14%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             +   +  L   +Y  A    E +L +      A + L     R G+L +A+    +  
Sbjct: 41  TRIALGRAYLEAGRYEDAARLFEDVLALDYNNFAAHFGLGLAHYRQGNLKAARFEFEQLT 100

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-----KKNAKEWNRNRAILLIARSLEN 236
            + P+       +   Y  A  W  A     +       ++       +A L +A +   
Sbjct: 101 HLYPERFEGWYNLAVVYAQANNWEAATEAFTRAIELGEAQDLATPELKQAYLGLAEAHRK 160

Query: 237 ADKGDMIAS----------------------YHDAIESLKLCDNS----------IMASI 264
             + D  A                          A E+L+   +           + A  
Sbjct: 161 QGRPDQAAEVLKRALARFEGDLEVTYLLAENLTLAGEALEAIPHLYSVLQKDRGHVAAVS 220

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEE 319
             A   + Q  + +A   L++       P I           L         +   +  +
Sbjct: 221 LLADIYVGQGLRDRALRELDRSLAQAADPRIQAQLLLKKALLLQGAQPHQSRELLEQAVQ 280

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKI 378
           ++ +  ++   +    L+ G   +A     LA ++ P +  + L +A        + + +
Sbjct: 281 LDPDLWQAHYNLGVAWLKAGDPSRAMQSFRLAYRLQPNEPRVLLGMAVAADQLGESAEAL 340

Query: 379 L 379
            
Sbjct: 341 R 341



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 83/293 (28%), Gaps = 24/293 (8%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R +    +Q          YL   +    + + + A E L+  L          Y L   
Sbjct: 132 RAIELGEAQDLATPELKQAYLGLAEAHRKQGRPDQAAEVLKRALARFEGDLEVTYLLAEN 191

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G+   A  +    L            +   YV      RA+  L++    A +   
Sbjct: 192 LTLAGEALEAIPHLYSVLQKDRGHVAAVSLLADIYVGQGLRDRALRELDRSLAQAADPRI 251

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                L+ +            S     ++++L  +   A      + +      +A    
Sbjct: 252 QAQ--LLLKKALLLQGAQPHQSRELLEQAVQLDPDLWQAHYNLGVAWLKAGDPSRAMQSF 309

Query: 284 EKIWKVNPH-PEIA---NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEM 338
              +++ P+ P +     +    L E+    +           +   E+LV++ K A  +
Sbjct: 310 RLAYRLQPNEPRVLLGMAVAADQLGESAEALRFAGLAAAIAEGRTKAEALVLIGKSAYRL 369

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           G  D A      A+ +  +                   +   W   A +A  D
Sbjct: 370 GRYDAALEALGQAVALDDQ-----------------DGQAWLWLGLAAYAARD 405


>gi|326387239|ref|ZP_08208849.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208420|gb|EGD59227.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 689

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 67/199 (33%), Gaps = 15/199 (7%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEW 221
           +    D   A   A + L + P  P     +++   L    + + A   L +   +    
Sbjct: 36  ALLGRDPAMALGQAREILRVVPGHPQAM--LIEGQALRLLGDLAAARAVLARLAADQP-- 91

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-- 279
               A+ L   +L +   G+   +      +L L  + + A    A +L    ++  A  
Sbjct: 92  --RSALTLFELALVHGQMGEPRQAVVALERALGLKPDFLPAWHALAGALRETGREADARI 149

Query: 280 --EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
                +E   +    P +      +  +N             +      +L +  ++A  
Sbjct: 150 ADAKAVEAATRD---PVLVKAAIAMHQQNFQTVEAMLEERIRMLPRDAAALRLYGEVAWR 206

Query: 338 MGSIDQAHAKAMLAMKIAP 356
            G +DQA A+    +++AP
Sbjct: 207 QGQLDQAIARLKRTLEVAP 225



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 11/297 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  +                 L+E Q          A   L  +          ++ L  
Sbjct: 43  AMALGQAREILRVVPGHPQAMLIEGQALRLLGDLAAARAVLARLAADQPRSALTLFELAL 102

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              ++G+   A     +AL + PD      A+          + A        K  +   
Sbjct: 103 VHGQMGEPRQAVVALERALGLKPDFLPAWHALAGALRETGREADARI---ADAKAVEAAT 159

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           R+  ++  A ++   +   + A      E +++      A     +    Q +  +A   
Sbjct: 160 RDPVLVKAAIAMHQQNFQTVEAMLE---ERIRMLPRDAAALRLYGEVAWRQGQLDQAIAR 216

Query: 283 LEKIWKVNPHPEIA-NIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           L++  +V P    A  +   +  +  +    L  A  L E   +SV   ++ + + + +G
Sbjct: 217 LKRTLEVAPGFGAARELLVRIMQMGPDVADALVHASILLEDEPDSVGHALLKASLQVRLG 276

Query: 340 SIDQAHA-KAMLAMKIAPRKEIFLLLAQIEQANS-HNTDKILYWTQSALHAMPDPLW 394
             + A      L  +   +  ++L L  +E+           Y    AL       W
Sbjct: 277 EQEAAGTIYRGLVARGVDQPRVWLNLGHVEKTLGNQADAIAAYRRSIALDPALGEGW 333


>gi|258576719|ref|XP_002542541.1| hypothetical protein UREG_02057 [Uncinocarpus reesii 1704]
 gi|237902807|gb|EEP77208.1| hypothetical protein UREG_02057 [Uncinocarpus reesii 1704]
          Length = 419

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 17/171 (9%)

Query: 134 RQYNI-AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT- 191
                 A   L    Q P          Y +    GD + A ++  + L + PD+     
Sbjct: 99  GDAQNIAMSLLRENSQDPDALFLRGRLFYLQ----GDADQAIKHFKRVLSLDPDSTQAVK 154

Query: 192 -----EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                + +++          A+ +  AI       +         + +L  R+    +  
Sbjct: 155 YLRMVQKLLRIKDEGNTAFKARRYREAIAKYTAGLEVDPTNKDINSKILQNRAQARYNIN 214

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +   +  D  ++L+L    + A    AK+  ++    KA   L+ I + +P
Sbjct: 215 EYDKAIEDCTKALELDPTYVKAKRVRAKTYGTKGDWEKAVNELKAIGESHP 265


>gi|171915863|ref|ZP_02931333.1| hypothetical protein VspiD_31870 [Verrucomicrobium spinosum DSM
           4136]
          Length = 1369

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +I +  + LAR+    V +               Q       + +A ++ E +L      
Sbjct: 610 AIHSGEVWLARRPSLNVRRWL------------AQTVFTSGDHKLALQQFEEILATDPAN 657

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           + + Y L       G+   A   A K L    ++P    A+    +  K +  A     +
Sbjct: 658 KRSAYDLAEYCNEAGEHTRAAEVAEKVLKDEAESPRALMALGWSQMGRKWYKDAKQTFER 717

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASY---------HDAIESLKLCDNS 259
             +KN K+     AI   + +L   D  D+               A++ LK+ D+ 
Sbjct: 718 AAQKNPKDTEVQSAIRSASAALGQGDNSDIKQMLPPVETPPEVLSALDQLKVPDDL 773


>gi|77457281|ref|YP_346786.1| MCP methyltransferase, CheR-type [Pseudomonas fluorescens Pf0-1]
 gi|77381284|gb|ABA72797.1| putative chemotaxis-related methyltransferase [Pseudomonas
           fluorescens Pf0-1]
          Length = 425

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 1/110 (0%)

Query: 118 NEYLVYLLEVQIALA-ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           N     LL    ALA E +   A    E  L+         Y L   S   G    AQ +
Sbjct: 315 NPDATTLLANIAALANEGKSAEARAACEQYLRSHEPVAQVFYWLGLLSDVAGSALEAQGF 374

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             KAL + P  P     +        + + A     +  ++ +  +  R 
Sbjct: 375 YRKALYLEPQHPEALMHLAALLQAQGDTAGARRLQERAARSGRTADSERK 424


>gi|291566679|dbj|BAI88951.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 729

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 73/265 (27%), Gaps = 28/265 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA------ 151
               A +    ++    + + +L  LL  Q      Q   A E     +   P       
Sbjct: 197 EAIAAYRQEITLNPDFYWSHFHLGDLLSQQ-----NQPEEAIEAYRQAIAINPQQPEAHQ 251

Query: 152 --TREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             T   + +    E +   G    A       +   PD  W    +    +  ++W  AI
Sbjct: 252 RLTEILSRHQKTGEDALLTGRYEEAIAIYRDMVAARPDYSWGYYGLGLALLNQRQWREAI 311

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              NQ      +     +   +   L    +G +  +     +++ +        I    
Sbjct: 312 DVFNQAISINPDC--FWSYNHLGYCL--FKQGKISPAIDAYKQAIAIDPEIPEVYIRLGD 367

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANI---------YTHLLSENTVGKLKRALRLEE 319
           +L+ Q     A        K  P  EIA +         +  L  E          +   
Sbjct: 368 ALLQQPDIDGAIAAYLDAIKAQPEAEIAYLKLRHLRTYSFIKLQPEQIEAIASSYQQAIS 427

Query: 320 INKESVESLVIVSKIALEMGSIDQA 344
                 E  +    +  E+G I +A
Sbjct: 428 QVPHYPEPYINYGDLLTEIGQISEA 452



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 81/248 (32%), Gaps = 13/248 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q   +++Q   A       +++     ++ + L     R+G +  A     + + ++PD
Sbjct: 152 GQALSSQKQDEQAITAYRKAIELKPDFCWSYHHLAVILTRLGRVEEAIAAYRQEITLNPD 211

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENADK---G 240
             W    +        +   AI    Q         E ++    +L        D    G
Sbjct: 212 FYWSHFHLGDLLSQQNQPEEAIEAYRQAIAINPQQPEAHQRLTEILSRHQKTGEDALLTG 271

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +     + +    +          +L++Q + R+A  +  +   +N  P+    Y 
Sbjct: 272 RYEEAIAIYRDMVAARPDYSWGYYGLGLALLNQRQWREAIDVFNQAISIN--PDCFWSYN 329

Query: 301 HL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           HL             +    +   I+ E  E  + +    L+   ID A A  + A+K  
Sbjct: 330 HLGYCLFKQGKISPAIDAYKQAIAIDPEIPEVYIRLGDALLQQPDIDGAIAAYLDAIKAQ 389

Query: 356 PRKEIFLL 363
           P  EI  L
Sbjct: 390 PEAEIAYL 397


>gi|239905482|ref|YP_002952221.1| hypothetical protein DMR_08440 [Desulfovibrio magneticus RS-1]
 gi|239795346|dbj|BAH74335.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 1619

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 79/291 (27%), Gaps = 22/291 (7%)

Query: 92  LMSIAAHNIP--LARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQ 148
           ++S+ A       AR+  ++   Q    +  +       +   E      A      +L 
Sbjct: 700 VISLLAGENRFTEARQYAAWYDAQVAKGDRAVFG--TAAVVRLELGDPAGAEALYRKLLT 757

Query: 149 IPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                                     A      A    P        + +      ++  
Sbjct: 758 QNPNSLDYLGGLGRALNRQSRYAQTGAALGNAYAASADPTL---GALLCEASSAQGDYRE 814

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           AI         +        + L A + E A        Y      L+L  +S+      
Sbjct: 815 AIRLAEVGLARSP--KDRELLRLAAEAAEFAKNLPACEGY--VRRVLELDPDSLTMQNML 870

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEIN 321
            + L+ Q K  +AE   + I   NPH       + ++Y   LS       K A  L E  
Sbjct: 871 GRVLLDQEKFPEAEEHFQAILAKNPHQLSSLRGLLSVYQ--LSGKADKAYKVAKALREAA 928

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371
            +   + +  +  A    +   A+       +  P   +  L  A +  A 
Sbjct: 929 PDDASAQLKFAIAAAGDHAFRPAYPMLEKLHEFGPGSGVLCLYYADVRDAE 979



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 67/197 (34%), Gaps = 5/197 (2%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD   A  +  + L ++P    +   V+        ++ A         +A+    
Sbjct: 670 AYLDGDKVQALTHFQRCLALAPADDAMRLRVISLLAGENRFTEARQ--YAAWYDAQVAKG 727

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +RA+   A ++   + GD   +     + L    NS+       ++L  Q++  +    L
Sbjct: 728 DRAVFGTA-AVVRLELGDPAGAEALYRKLLTQNPNSLDYLGGLGRALNRQSRYAQTGAAL 786

Query: 284 EKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
              +  +  P +  +     S   +    ++ A      + +  E L + ++ A    ++
Sbjct: 787 GNAYAASADPTLGALLCEASSAQGDYREAIRLAEVGLARSPKDRELLRLAAEAAEFAKNL 846

Query: 342 DQAHAKAMLAMKIAPRK 358
                     +++ P  
Sbjct: 847 PACEGYVRRVLELDPDS 863



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 5/126 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   G L+ A     +AL   P  P +        + AK+++ A+  L    K   + 
Sbjct: 35  QQAAARGQLDQAMDMVNQALSQDPAYPPLWNQKASLQIKAKDYAGAMQTLAVALKVEPD- 93

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                 +L   +L   D+         A  +  L D    A    +  L     K     
Sbjct: 94  -NIETNVLALSALLRLDEKAGGKDPALARYAAGLSDG--TAGALVSDLLTRPGAKADLRR 150

Query: 282 ILEKIW 287
            L   W
Sbjct: 151 FL-AAW 155


>gi|219116100|ref|XP_002178845.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409612|gb|EEC49543.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 500

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 22/219 (10%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-- 214
           + S   E+  +GD  +A +Y  +A+ + P++      + +     + +  A+  ++Q   
Sbjct: 45  LRSNAEEAMAVGDYTTAVQYLQEAITLEPESAVNHYKLYRIRHRKRHYLEALRDISQAVE 104

Query: 215 KKNAKEWNRNRAILL-----IARSLENADKGDMIASYHDAIESLKLCDNSIMAS---ICA 266
            +++  + + +A LL       R++   D        +   E+ K+C  +I  +      
Sbjct: 105 LESSASYRKLKAKLLVTLGQCDRAVAELDLLAPNDQDNAQYETAKMCHETIQLAEYHFLN 164

Query: 267 AKSLISQNKKRKAEVILEKI----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +  ++    ++A   +E      W            +   + +  G +     L + + 
Sbjct: 165 QEYELAAEYFQQAMSFVEIASDLVWP--------KAKSLFETGDYYGVISDTGMLLKQHP 216

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             VE+  +       +G  DQA       +K+ P +   
Sbjct: 217 HHVEAYCLRGSAYHRLGEHDQAVLHFREGLKLDPEQADC 255


>gi|282164261|ref|YP_003356646.1| hypothetical protein MCP_1591 [Methanocella paludicola SANAE]
 gi|282156575|dbj|BAI61663.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 805

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDL----NSAQRYA 177
           +++       +   + A ++    ++I      A Y L    + +  D       A    
Sbjct: 95  HVVLGMALFNKGSLDEAIKEFRDAIRINPGDAHAHYHLGTALAKKAEDTPILYYEAMLEF 154

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL-IARSLEN 236
            +A+ + P+       + +          A+    +  +   E+      L     ++  
Sbjct: 155 REAIRLMPELAKAHNGLGKALGKRNLMDEAVHEFREAIRIMPEYEEAHMNLAETYSAIHR 214

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--- 293
           +             E+LKL +    A    A+ L    K  +A  +L+++   N H    
Sbjct: 215 SQDAIPEF-----REALKLNNGHPYAKYKLARELRITGKYTEAIALLKEVAVKNSHRIEV 269

Query: 294 --EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+   Y    + +    +       +I   ++    ++     + G++D A A    A
Sbjct: 270 HNELGAAYAA--THDLNNAIAEFNEALKIEPANMAVKGLLGLALTQKGALDDAIAVLKEA 327

Query: 352 MKIAPR 357
           + ++P 
Sbjct: 328 IPLSPD 333


>gi|254477204|ref|ZP_05090590.1| conserved hypothetical protein [Ruegeria sp. R11]
 gi|214031447|gb|EEB72282.1| conserved hypothetical protein [Ruegeria sp. R11]
          Length = 849

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 86/283 (30%), Gaps = 34/283 (12%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATREF 155
           A +  LA      + +         + L E ++A  E     +A E  E + +       
Sbjct: 506 AGDPHLAGAALRSLDRMGVEDIPD-INLAEAELAKLEGDIETVAEELTEEVAERTENAPR 564

Query: 156 AVYSLY------FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           A+  L        ++      + A  Y  ++ D    A  + EA+V    L  ++  +  
Sbjct: 565 ALIELIELSYDERKALSPDVPDLAASYEVESRDSELGAD-LREAIVTALALTGQYHDSFA 623

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L++  ++  +  R  A++ +   L           Y     +     +    +   A  
Sbjct: 624 QLDKVDRHDGDAARATAMIPLMTLLTERADDVTFLQYALVFAANGKAADVEPVADLVAAR 683

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESL 328
           L+     ++A+ +L+K                +   NT  +L  A   L +    +    
Sbjct: 684 LLDLGFAQQAQALLKK--------------LAMEPGNTKRRLMLAKAALVQEKPHAALVE 729

Query: 329 V----------IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +          + ++   + G   +A    +           F
Sbjct: 730 LMGLSGSDADKLRAEALWQNGEYARAGEYLLEVEDKDAAARGF 772


>gi|192361665|ref|YP_001981966.1| type IV pilus biogenesis protein PilF [Cellvibrio japonicus
           Ueda107]
 gi|190687830|gb|ACE85508.1| type IV pilus biogenesis protein PilF [Cellvibrio japonicus
           Ueda107]
          Length = 261

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 15/203 (7%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+  SA+ +  KA DI+  +P  T  + Q Y L  E + A     +  +  K++    A 
Sbjct: 58  GNRESARLHLGKAFDINKRSPEATLVLAQLYELEGEPALAEETFKKAIRLKKDFT--EAH 115

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                SL NA + +   S  +   +    D    A +   ++ +   KK++A    E   
Sbjct: 116 NSYGISLFNAKRYEEALSQFERAAADLGYDGRAEALVNVGRTAVQLGKKQRAHAAFEHAT 175

Query: 288 KVNPHPEIANIYTHLLS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +N   ++   +  L                L R + L         +L+I  ++    G
Sbjct: 176 VLN--RDLPPAFIELADLNFQEQNYAEAKQNLDRFMALTSATPR---ALLIGIRLERIFG 230

Query: 340 SIDQAHAKAMLAMKIAPRKEIFL 362
           + D+  +  ++     P    +L
Sbjct: 231 NKDKEASYLLMLKNKFPYSREYL 253


>gi|317476438|ref|ZP_07935687.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
 gi|316907464|gb|EFV29169.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
          Length = 1010

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 92/282 (32%), Gaps = 46/282 (16%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF--A 156
             LA +M   +  + +   + L Y +  +    + +   A       LQ  P       A
Sbjct: 722 AALAAQMPGAIRFEPS-EQDSLTY-IAAEKVYMKGELTPAKASFTRYLQSYPNGAFSLNA 779

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ 213
            Y L        D  +   +A K L+  PD+P+  EA++   +     KE+ +A+    Q
Sbjct: 780 HYYLSIIGKEQKDEVAVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQ 838

Query: 214 KKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSL 270
            +  A    R +  A  ++       D  ++I +    +   KL       A    AK+ 
Sbjct: 839 LQARATTAERRQLGATGVLRCGALLKDDIEVIQAATTLLTEAKLTPELQNEALYYRAKAY 898

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           ++Q   +KA                         ++     K    L        E+  +
Sbjct: 899 LNQKAVKKAA------------------------DDLKLLAKDTRTLYG-----AEAKFL 929

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQI 367
           V++     G    A  + +  +  +          F+LL+ +
Sbjct: 930 VAQQMYNAGEYAAAEKEILNFIDQSTPHAYWLARSFILLSDV 971


>gi|302839984|ref|XP_002951548.1| hypothetical protein VOLCADRAFT_92153 [Volvox carteri f. nagariensis]
 gi|300263157|gb|EFJ47359.1| hypothetical protein VOLCADRAFT_92153 [Volvox carteri f. nagariensis]
          Length = 1345

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 34/221 (15%)

Query: 173  AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
            A+  A +AL   P       A+       +     +       + A   +R    L +  
Sbjct: 962  ARIVAAEALRKCP----ADVALYVLAAGVELEGGNLELAKSYCQRAYALDRTDKQLFLVW 1017

Query: 233  SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                A  GD + +      +L +   +       A+    +   R+A             
Sbjct: 1018 PRVEAALGDRLKARLLYERALDMYPLNTKILNLYARFEAEEGSYREA------------- 1064

Query: 293  PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
               A +Y   L  + +  +       +            + +  ++G+I  A A     +
Sbjct: 1065 ---AELYDRALRIDPLSPVMGVHNRADW-----------ASLEADLGNISLARALLEGGL 1110

Query: 353  KIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDP 392
            +  PR    L+ LA++E+     ++ +      A  A+  P
Sbjct: 1111 EAHPRSTPLLVTLAKVERLEGRYSEALR--LVRAAQAIAGP 1149


>gi|213402289|ref|XP_002171917.1| pre-mRNA-splicing factor prp1 [Schizosaccharomyces japonicus
           yFS275]
 gi|211999964|gb|EEB05624.1| pre-mRNA-splicing factor prp1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 910

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 88/260 (33%), Gaps = 38/260 (14%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD++ A+    +A + +P++  +  A V+   +  E  RA   L + +  A      
Sbjct: 588 KDHGDVDGARNVLGRAFEQNPNSEEIWLAAVKLEFINHEDERARKLLARARIEAGTQRVW 647

Query: 225 RAILLIARSLENADKG-----------------------------DMIASYHDAIESLKL 255
              + + R L + D                                +  +     E++K 
Sbjct: 648 TKSISMERVLGHLDSAFQLTEEALKLFQNHDKLWMMKGQMLESQQKVEETRQTYAEAVKH 707

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
           C NS+   I   +         +A VIL++    NP  E+   +  +  E + G + +  
Sbjct: 708 CPNSVNLWILFIQFERRNTSIVRARVILDRARVKNPKNEL-LWFEAINMEESAGNMPQVK 766

Query: 316 -RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQAN 371
             L +  +E   S ++ SK    +    +A  K      +   +    LL   A+I    
Sbjct: 767 AALAKALQECPSSGLLWSKA---IWLEPRAQRKTRATDALRKCEHNAFLLCTVARIFWIE 823

Query: 372 SHNTDKILYWTQSALHAMPD 391
               DK   W   A+ A  D
Sbjct: 824 RK-LDKARNWFFKAIKADQD 842


>gi|189189870|ref|XP_001931274.1| NMDA receptor-regulated protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187972880|gb|EDU40379.1| NMDA receptor-regulated protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 832

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 12/162 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y  A +  +M L+I       +  L    C++ D         K +   P       A
Sbjct: 91  KNYPEAIKSYKMALRIEPNSLNILRDLALLQCQVRDYEGYIESRRKMMQERPQLRQNWTA 150

Query: 194 VVQQYVLAKEWSRA---ITFLNQKKKN---AKEWNRNRAILLIARSLENADKGDMIASYH 247
           +   Y L+  ++ A   +    +  K      +   + A L   ++    + GD+  +  
Sbjct: 151 LAVAYHLSGNYAEAENILKTYEETLKRPPPKTDLEHSEATL--YKNQIIYESGDVERALK 208

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              E ++   +   A    AK L+   +K +A    EK ++V
Sbjct: 209 HLEEVVRDSLDRGAALELKAKYLLELGRKEEA----EKAYRV 246


>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 1056

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 82/239 (34%), Gaps = 13/239 (5%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             +++ +  +A     + +L  P +    A           G+ + A     +AL ++P 
Sbjct: 443 ALVSKGEPTLAIADYDKALLLDPKSATVYANRG--RAFQDKGEYDRAIADYDQALRLNPK 500

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                        L  E  RAI   +Q  +   ++         +R L   DKG+   + 
Sbjct: 501 DAIALNNRADILRLRHEHDRAIASYDQALQLNPKY----VGAYNSRGLAFQDKGEYDRAI 556

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----IYTHL 302
            +  ++L+L    I A I    +   + +  +A     +  +++ +  IA     +  H 
Sbjct: 557 ANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHE 616

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             E     +     L +I+       +       + G  D+A A    A++I PR    
Sbjct: 617 QGEYDRAIIDYDRAL-QIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQIDPRSATA 674



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 8/150 (5%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            ++  A  +    +   P      +     F     GD + A      AL I P++    
Sbjct: 40  GEHEKAIAEFNLALRLNPKLVSAYINRGFAF--RNKGDYDRAIADYDHALQIDPNSVVAF 97

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                 +    E+ RAI   N+  K + +    +A +   R L    K +   +  D  +
Sbjct: 98  NNRGDAFYHKGEYDRAIADYNRSIKLSSD----KAAVYNNRGLAFFSKEEYDRAIADYNQ 153

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +L+L    + A++    +  S+ +  +A  
Sbjct: 154 ALRLDPKYLSAALNRGDAFRSKGEYDRAIA 183



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 77/234 (32%), Gaps = 11/234 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y+ A       LQI      A+ +        GD + A      AL I+P+  +    
Sbjct: 278 GEYDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNG 337

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    E+ RAI   +Q  +   ++          R      KG+   +  D  ++L
Sbjct: 338 RGVALQNKGEYDRAIMDYDQALRLDPKY----VFAFANRGDAFRSKGEHDVAIADYNQAL 393

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTV 308
           +L  N   A     + L  QNK +    I +    +   P     Y       +      
Sbjct: 394 RLSPNY--AKAYNGRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPT 451

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             +    +   ++ +S        +   + G  D+A A    A+++ P+  I L
Sbjct: 452 LAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIAL 505


>gi|17566070|ref|NP_507525.1| hypothetical protein Y59A8B.6 [Caenorhabditis elegans]
 gi|15718341|emb|CAC14407.3| C. elegans protein Y59A8B.6, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 968

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 24/230 (10%)

Query: 171 NSAQRYATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           ++A+    KA   +P A  W+  A  +  +       A     +  +   ++++   +L 
Sbjct: 686 DTARGLFGKARAKAPSARVWMKNAHFEWCL--GNVEEAKRLCEECIQKYDDFHKIYLVL- 742

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
                      D+  +     + ++ C   I   I   +      +  KA V LEK    
Sbjct: 743 ---GQVLEQMNDVHGARLAYTQGIRKCPGVIPLWILLVRLEEKAGQIVKARVDLEKARLR 799

Query: 290 NPHPEIANIYTHLL--------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           NP  +  +++   +         E    ++ RAL+      E   S  + ++     G  
Sbjct: 800 NPKND--DLWLESVRFEQRVGCPEMAKERMSRALQ------ECEGSGKLWAEAIWMEGPH 851

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +         K      + +  A++  +      K   W   A++  PD
Sbjct: 852 GRRAKSIDALKKCEHNPHVLIAAARLFWSERK-IKKAREWFVRAVNLDPD 900



 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 25/212 (11%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A+       + +P  P  WV  AV+++          +           E  +N  
Sbjct: 316 DIKKARMLLKSVRETNPRHPPAWVASAVLEEQA------GKLQTARNFIMEGCEKIKNSE 369

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L     L                 +++ C +S+     A+        K+K   +L K 
Sbjct: 370 ELW----LHAIRLHPPELGRSIVANAVRSCPHSVRLWCKASDLEQDLKDKKK---VLRKA 422

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P   ++      L   E+    L RA    E    S E  + ++++     + + A
Sbjct: 423 LEQIPSSVKLWKAAVELEDPEDARILLTRA---VECCSSSTEMWLALARL----ETYENA 475

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNT 375
                 A +  P    I+L  A++E+      
Sbjct: 476 RKVLNKAREHIPTDRHIWLSAARLEETRGQKD 507


>gi|257060934|ref|YP_003138822.1| hypothetical protein Cyan8802_3148 [Cyanothece sp. PCC 8802]
 gi|256591100|gb|ACV01987.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 249

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 11/162 (6%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                ++  AI    +  KN      N       R    ++ G    +  D  +SL L  
Sbjct: 70  KSRQGDYQGAIADFTEALKNNP----NDINAYYNRGFAYSNLGKFDLALADFSQSLILDP 125

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
             + A +      +     ++A     +  K+NP     H  +   Y +L   +     K
Sbjct: 126 KMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQ--K 183

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                  I+ +  E+         ++G   +A A    A +I
Sbjct: 184 DFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225


>gi|195397243|ref|XP_002057238.1| GJ16979 [Drosophila virilis]
 gi|194147005|gb|EDW62724.1| GJ16979 [Drosophila virilis]
          Length = 607

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 7/186 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYS-LYFESCRIGDLNSAQRYATKA 180
            L  Q++    +Y+ +    E  L +         +   L+    R  D   A      A
Sbjct: 309 FLHAQLSYMNSKYDRSLIFTERALAMDARNIEALLLRGRLFGGLGRHKD---AIDVFRSA 365

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             ++P    V + +V  ++  K    A T      +  +   R+  +         A+  
Sbjct: 366 RCLAPYRFEVYKGLVACFIRLKWLKEAQTMCALAVRYFRTSPRSYTMF-GGTLFHLANPT 424

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
              ++     ++L++ ++        A     +   ++A V+L K    +PHP++  +  
Sbjct: 425 AKKSARKFVEKALQIDEHYAPGIALMASIYQDEGDTQEAIVLLRKQVASHPHPKLFAMLA 484

Query: 301 HLLSEN 306
            LLS +
Sbjct: 485 ELLSVD 490


>gi|170698736|ref|ZP_02889801.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           IOP40-10]
 gi|170136361|gb|EDT04624.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           IOP40-10]
          Length = 828

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 87/277 (31%), Gaps = 18/277 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL   L    A  +  A+ ++  +           ++ L +     ++           
Sbjct: 6   QALQEALAHHQAGRLGEAKTLYDAILHAQ-PGQPDAMHFLGLLACQLKQYDAGLALMERS 64

Query: 146 MLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +   P       + ++  E  R+ D   A  +  +A+ + PD P     +      A++ 
Sbjct: 65  LAARPDASYFNNLGNMLRECGRLDD---AIAHYRRAVALRPDYPEAHNNLGNALRDARDP 121

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A+   ++  +    +    A           D G++ A+     +++        A  
Sbjct: 122 AEAMQSCSRAIELRPGY----AEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHS 177

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319
                L +Q++   A V   +  ++NP     H  +A         +   +  R      
Sbjct: 178 NLGNVLRAQDRHADAIVHYRRAIELNPALRVVHRGLAIALRATDDFDGALEHAR----AG 233

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  +  E    + +    M   D A      A +I P
Sbjct: 234 LEPDDAEGHCALGRSLRSMNDFDGAARLFERACEIDP 270



 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 70/245 (28%), Gaps = 12/245 (4%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L E        +   A    + +L     +  A++ L   +C++   ++      ++L  
Sbjct: 8   LQEALAHHQAGRLGEAKTLYDAILHAQPGQPDAMHFLGLLACQLKQYDAGLALMERSLAA 67

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            PDA +    +            AI    +      ++    A   +  +L   D  D  
Sbjct: 68  RPDASY-FNNLGNMLRECGRLDDAIAHYRRAVALRPDYP--EAHNNLGNAL--RDARDPA 122

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL- 302
            +      +++L      A       L    +   A     K   +  HP  A  +++L 
Sbjct: 123 EAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKA--IAFHPAYAEAHSNLG 180

Query: 303 ----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                 +     +    R  E+N         ++         D A   A   ++    +
Sbjct: 181 NVLRAQDRHADAIVHYRRAIELNPALRVVHRGLAIALRATDDFDGALEHARAGLEPDDAE 240

Query: 359 EIFLL 363
               L
Sbjct: 241 GHCAL 245



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 80/266 (30%), Gaps = 57/266 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATR 153
             +  A   +      H  + E    L  +L  Q      ++  A       ++  PA R
Sbjct: 153 GELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQ-----DRHADAIVHYRRAIELNPALR 207

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                 L        D + A  +A     + PD      A+ +      ++  A     +
Sbjct: 208 VV-HRGLAIALRATDDFDGALEHAR--AGLEPDDAEGHCALGRSLRSMNDFDGAARLFER 264

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                                 + ++      A     +    Q
Sbjct: 265 --------------------------------------ACEIDPGYAPAWCRLGELRCQQ 286

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRAL----RLEEINKESVESL 328
            +  ++  +     +++  PE+A+ Y  L L+ + + ++  +        ++N +  ++ 
Sbjct: 287 GEYEESLRLCRHAIELD--PELADAYNFLGLAYHNLDRMAASELSHRHAIDLNPDDADAH 344

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKI 354
             ++     +  +D+A ++  +A ++
Sbjct: 345 HNLAAALFRLDKLDEAMSEYRIAQEL 370


>gi|116749051|ref|YP_845738.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698115|gb|ABK17303.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 544

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 19/216 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ---------- 213
           +        A ++ + ALD  P A  +   +   Y    +  +A   L Q          
Sbjct: 202 ALEEKRYEDAVKFLSSALDKQPAANLIHYQLAMAYRGLGDAGKAREHLAQRGIVGLQPPD 261

Query: 214 --KKKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             K++  K     R  +L  R +       +   ++  A+++     + + A I  A +L
Sbjct: 262 PLKERLDKLVTGYRVHVLTGRRAYGAGRFEEAAEAFQRAVDAN---PDDVGARINLAAAL 318

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVES 327
               K R+A   L++  +++P    A+    LL          +K      E      ++
Sbjct: 319 AGLQKVREAMEQLQEAIRLSPQNSTAHFNLGLLRSHMGEYAESIKHFRIALEARPNDHQA 378

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              ++   +  G   +A  +   A+ + P      L
Sbjct: 379 HAALADALVREGKFGEAFDQYKAAVDLEPNLTAAWL 414


>gi|91203625|emb|CAJ71278.1| putative tpr repeat protein [Candidatus Kuenenia stuttgartiensis]
          Length = 647

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 68/214 (31%), Gaps = 12/214 (5%)

Query: 49  YFFLFAWILLFAVSR--FFLSCPAMLFHMLHKR--NYDKGYKALYTGLMSIAAHNIPLAR 104
           +  +  ++L++   +                +R     + Y  L  G        I  A 
Sbjct: 391 FVVIICFLLMWGTIQRNGIWLNEFTFSTETIRRSPKSYRIYNGL--GYFYYNNGLIDKAI 448

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           +      Q    H +    L        +   + A E+L+  +++      A  +L    
Sbjct: 449 QAFEGSIQAMPTHPKAHSNL--GAAYSLKGMQDKAIEELQFAVRLREQYPEAHNNLGLLY 506

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G  + A      AL  +P        +   Y+    +  A++ L +  K    +   
Sbjct: 507 KRKGMPDMAINEYVAALKTNPYYADAHNNLGSVYIDTGRYEEALSELEKALKIRSNF--- 563

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
            A+     ++    KG +  +Y+  +E+ KL   
Sbjct: 564 -ALAHYNMAVIYFKKGQVEDAYNKLLEAYKLDPG 596



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 56/193 (29%), Gaps = 10/193 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A +  E  +Q   T   A  +L       G  + A      A+ +    P     +  
Sbjct: 445 DKAIQAFEGSIQAMPTHPKAHSNLGAAYSLKGMQDKAIEELQFAVRLREQYPEAHNNLGL 504

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y        AI       K    +    A           D G    +  +  ++LK+ 
Sbjct: 505 LYKRKGMPDMAINEYVAALKTNPYY----ADAHNNLGSVYIDTGRYEEALSELEKALKIR 560

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKL 311
            N  +A    A     + +   A   L + +K++P     H  +  +Y     +      
Sbjct: 561 SNFALAHYNMAVIYFKKGQVEDAYNKLLEAYKLDPGNADVHLSLGVVYKDHFHDTAKALF 620

Query: 312 KRALRLEEINKES 324
                L  IN + 
Sbjct: 621 HIKESL-RINPQH 632


>gi|327481909|gb|AEA85219.1| TPR domain-containing protein [Pseudomonas stutzeri DSM 4166]
          Length = 575

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 86/291 (29%), Gaps = 39/291 (13%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
                    S V++  +F  + L  LL  ++A    +++IA                A  
Sbjct: 31  EDAAPEAAASEVTEYGSFTRQSLYALLVAELAGQRNRFDIALGNYVQQAHATQDAGVAER 90

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
             +  +  +G   +A   +      +P+      A   Q   A  +  ++ F+ +  +  
Sbjct: 91  G-FRIAEYLGADQAALDTSLIWARNAPENLDAQRAAAVQLARAGRYEESMEFMEKVLQGQ 149

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS------------------- 259
            +      + L A   +   +  ++ S+   +                            
Sbjct: 150 GD-THFDFLALSASETDPETRAGLLQSFDKLLARHPDNPQLSFGKAVLLQQDDRSEEALA 208

Query: 260 -----------IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHL--L 303
                      I + +  A+ L S  +  +A  +LEK   +  HPE   +   Y  L   
Sbjct: 209 LLQKQPAKQRQIPSILLEARLLHSLQRSDEALTLLEK--SLRQHPEDKRLRLTYARLLVE 266

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            E     +     L +      +    ++ + +E  +  +A       ++ 
Sbjct: 267 QERLEDAMGEFATLVQQYPADDDLRFSMALVCMEAEAWREATVYLEELVER 317


>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 1022

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 8/199 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
                    R +  Y           + Y     +  ++ +YN A       LQ      
Sbjct: 171 AFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIADYNQALQFDPKPI 230

Query: 155 FAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            A     L F+   +G+ + A    T+AL + P            + +  E+ RAI   +
Sbjct: 231 IAYNNRGLAFQ--NMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYD 288

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           Q       +    AI    R L   +KG+   +  D  ++L+L    ++A +    +  +
Sbjct: 289 QALHLNPNY----AIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRN 344

Query: 273 QNKKRKAEVILEKIWKVNP 291
           + +   A     +  ++NP
Sbjct: 345 KGENDVAIADYNQALRLNP 363



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREF 155
            +   A  +  Y           +VY         + +Y+ A     + +   P  T  +
Sbjct: 108 GDYERA--IADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIADYNQALQLDPNYTFAY 165

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                 F+    G+ + A    ++AL + P            +    E++RAI   NQ  
Sbjct: 166 NNRGFAFQGK--GEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIADYNQAL 223

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +    ++    I    R L   + G+   +  D  E+L+L    ++A +  A +   + +
Sbjct: 224 Q----FDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGE 279

Query: 276 KRKAEVILEKIWKVNPHPEIA 296
             +A V  ++   +NP+  IA
Sbjct: 280 YDRAIVDYDQALHLNPNYAIA 300



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 10/204 (4%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
            GL          A  +  Y           +  +        + +Y+ A     + +  
Sbjct: 236 RGLAFQNMGEYDRA--ISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHL 293

Query: 149 IPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            P          L F+    G+ + A    ++AL + P            +    E   A
Sbjct: 294 NPNYAIAYNNRGLAFQ--NKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVA 351

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I   NQ  +    +    +     R L   +KG+   +  D  ++++L   S +A     
Sbjct: 352 IADYNQALRLNPSY----STAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRG 407

Query: 268 KSLISQNKKRKAEVILEKIWKVNP 291
            +L S+ +  +A     +  ++NP
Sbjct: 408 FALQSKGEYDRAITDYNQALQLNP 431


>gi|153003810|ref|YP_001378135.1| hypothetical protein Anae109_0942 [Anaeromyxobacter sp. Fw109-5]
 gi|152027383|gb|ABS25151.1| Tetratricopeptide TPR_4 [Anaeromyxobacter sp. Fw109-5]
          Length = 765

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 88/293 (30%), Gaps = 14/293 (4%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
               + +   +   A+++ + V +         +  +   I L E   + A + L    +
Sbjct: 370 AEAYLKLYGGDAAGAKEVVNAVLEGAEGTQSPFLQGVLGAILLREGDLDGARDVLGKAQK 429

Query: 149 IPATREFAVYSLYFESCRIGDLNS--AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                    Y L  +  R G+     A  +   AL I  D  W      +  V   +   
Sbjct: 430 ASPGDVRIAYLLGEQYRRRGEGYELQATGFYDYALRIQKDHVWSILGKAEVLVARGQVGE 489

Query: 207 AITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           A              +R  +A+    R    A +G    +     E+ KL   S      
Sbjct: 490 AGKAAELVLTPQAAASRPQQALAYALRGAVLAAQGKASEASAAEAEAAKLDPASPEIPHL 549

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI 320
             +  + Q     A   L+    ++P       ++      L        L+   R    
Sbjct: 550 VGQRKLRQGDAAGAVEALQHAVSIDPRRVSLYADLVRAQLALEGG-AQQALETLKRAVGR 608

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKEIFLLLAQIEQA 370
             ES    +++       G  D A  +   A+++    P   +   LA++ +A
Sbjct: 609 VGESPRLALLLGDAYQAAGDADLARGQYEKAIQLGRPFPDARVA--LARLHRA 659


>gi|222053746|ref|YP_002536108.1| Exostosin family protein [Geobacter sp. FRC-32]
 gi|221563035|gb|ACM19007.1| Exostosin family protein [Geobacter sp. FRC-32]
          Length = 794

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 2/137 (1%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A  + +Y+        +  V        +   + + A    E  + +        
Sbjct: 18  GDYDGA--IAAYLQALQLAPRQPAVLNNLGLAYVESGRLDEAKVIFERFIALDPENAEPW 75

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L       GDL +A     KAL ++P        +       + WS AIT   +    
Sbjct: 76  NNLAVVVQMAGDLETATELFRKALALNPQYAEAWYNLGFALEEQRNWSDAITCNRRAILV 135

Query: 218 AKEWNRNRAILLIARSL 234
             ++      L +   L
Sbjct: 136 RTDYAEAHFNLALLHLL 152


>gi|15838397|ref|NP_299085.1| porphyrin biosynthesis protein [Xylella fastidiosa 9a5c]
 gi|9106874|gb|AAF84605.1|AE004001_10 porphyrin biosynthesis protein [Xylella fastidiosa 9a5c]
          Length = 389

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 60/367 (16%), Positives = 123/367 (33%), Gaps = 25/367 (6%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           L  +FF++ L I S   +   P     DV I  G   Y T+      +L   L     L 
Sbjct: 7   LAVWFFLLILGIFSGQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIILLLLWSLR 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           ++    +        +  +  Y +G+  L  GL ++      LA ++    S+       
Sbjct: 67  SLLALPI-------RIWERYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEVSAI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L     +++A     ++ A+     + +   T    + S    + +  +       A +
Sbjct: 120 ALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLDALE 177

Query: 180 ALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
              + P         ++Q     + +S   T   Q+  +  E+ R     +     +  D
Sbjct: 178 TRPLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFENETIENVLRQAKD 237

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPE 294
              +   +    ++LK   N +      A  L  +N    A + LE+     W  N    
Sbjct: 238 ANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLEN---AAMLSLEQTLDRSWDEN---- 290

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y  L  +    +  RA     ++ +S   L+ + ++A +     QA      A+  
Sbjct: 291 LIRLYGFLPLKEYETRQNRAEHWLTLHPDSPNLLLTLGRLARKQQQYSQAETFLRRAIDK 350

Query: 355 APRKEIF 361
               E +
Sbjct: 351 GTSAETW 357


>gi|66801425|ref|XP_629638.1| anaphase promoting complex subunit 7 [Dictyostelium discoideum AX4]
 gi|74996484|sp|Q54D58|APC7_DICDI RecName: Full=Anaphase-promoting complex subunit 7; Short=APC7
 gi|60463018|gb|EAL61214.1| anaphase promoting complex subunit 7 [Dictyostelium discoideum AX4]
          Length = 580

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 9/120 (7%)

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                       + +  +   A++  TKAL +SP        + +  V+   +  AI  L
Sbjct: 425 MALLG----MVLANQPEEREEARKILTKALTLSPHCTDTVLTLSKLNVVEGRFQEAIDIL 480

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           N +     E+     ++    +     K     +      +L++      AS   A+  +
Sbjct: 481 NSQL----EYQETD-LMHTEIAGVYLTKDYHEDAMIHYNSALEINPQYEPASRGIARLEL 535


>gi|293607393|ref|ZP_06689732.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292814237|gb|EFF73379.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 623

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 92/291 (31%), Gaps = 11/291 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+++A   + LA       +   + H     +    ++   +   + A E     + + 
Sbjct: 55  GLIALAYGRLDLAA--DHLRAACRSPHAPAAYHSNLAEVLRRQGLLDEAQEAARRAVALD 112

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             +     +L       G L ++ +   +   + PD+P     +        + ++A+  
Sbjct: 113 PQQAEGWNNLGIILQEQGQLEASLQCLRRVAALLPDSPQAHNNLGNTCKQLGDNAQALEH 172

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +      ++    A  L+  S+   D+G    +      ++ +      A    A+  
Sbjct: 173 YRRALALDPDY----AQALVNLSVALFDEGRSDEALTTIRRAIDIDPLMPQAHEHLAR-- 226

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           I Q    +A     +  +     + A      +       L R   L    +++     +
Sbjct: 227 IEQAGLGRATAPEAQAREHQSIHQEAQALLIAMRHAEAEALLR-GALAA-GEDTPLLWRL 284

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
           +++    +G + +A A     ++  P   E    LA++             
Sbjct: 285 LAQAIRPLGKVGEARAILERVVRAMPGDAEARFDLAELLLLEGDFEAGWRE 335


>gi|291566860|dbj|BAI89132.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 340

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 60/193 (31%), Gaps = 12/193 (6%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A     +A  + P+            +       A+   ++  +   +   +  I  
Sbjct: 141 YDEAIASYDRATQLQPNFHPAWRDRGALLMSIGRHEEALQAFDRLLQIQPD---DYGIWY 197

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  ++      D   +      ++ +  +   A    A++L       +A   +++    
Sbjct: 198 LRGNILMNHLDDYPEAAKSYTRAINIKPDFTPALTAQAQALFRLGDYGEAIASVDESLHH 257

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEIN------KESVESLVIVSKIALEMGSIDQ 343
           NPH      +  L  +  +   + A  L   N          +S +  +   L  G   +
Sbjct: 258 NPHQR--EAWV-LRGQIFMEIKRYAQALNAYNRAIYLDSNHSQSWLGKAIAYLRQGRDQE 314

Query: 344 AHAKAMLAMKIAP 356
           A  +   A++I P
Sbjct: 315 AKDRDQRALEINP 327


>gi|295677297|ref|YP_003605821.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
 gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
          Length = 628

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 89/285 (31%), Gaps = 21/285 (7%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A               +  + L       A  Q + A E+    L +  T   A Y+
Sbjct: 62  GQHAEAAALVRRAVDLRPEDAALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYN 121

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G    A     ++L + P+       +          + AI    +  +   
Sbjct: 122 LGNAYASLGRHEDAADAFERSLRLQPEDASSHNNLGNALHALGRHAEAIASFRRALELRP 181

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 A+  +  SL   D+ D      +A  +L +    + A    A +  +  +  +A
Sbjct: 182 --GHAGALNNMGMSLNALDRPDEAVPCFEA--ALAVEPRFVAAHFNLANTFDATGRHAQA 237

Query: 280 EVILEKIWKVNPH--PEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
               E   ++ P+  P I      +     +E  +  L+RA     ++ +   + + +  
Sbjct: 238 VASFEAALRLQPNLPPAIYGMGNALAALGRAEQALPYLERA---VGLDPQFALAWLALGT 294

Query: 334 IALEMGSIDQAHAKAMLAMKIAP--------RKEIFLLLAQIEQA 370
               +G+   A      A+++ P        R   +L +   E+ 
Sbjct: 295 AHQALGAHAAAVRALDQALRLRPDLASAHMNRALAWLAMRDFERG 339



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 39/302 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A  + + + A       L    +   A++ L     + G    A     +A+D+ P
Sbjct: 20  RAFAAHRDGRLDDAERGYRATLDHNPSHVDALHLLGVLRHQQGQHAEAAALVRRAVDLRP 79

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---------------NRNRAILLI 230
           +   +   +        +   AI         A  +                   A    
Sbjct: 80  EDAALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAF 139

Query: 231 ARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            RSL    +               G    +      +L+L      A      SL + ++
Sbjct: 140 ERSLRLQPEDASSHNNLGNALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDR 199

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             +A    E    V P     H  +AN +    +      +        +      ++  
Sbjct: 200 PDEAVPCFEAALAVEPRFVAAHFNLANTFDA--TGRHAQAVASFEAALRLQPNLPPAIYG 257

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           +      +G  +QA      A+ + P+    +L L    QA   +   +      AL   
Sbjct: 258 MGNALAALGRAEQALPYLERAVGLDPQFALAWLALGTAHQALGAHAAAVRA-LDQALRLR 316

Query: 390 PD 391
           PD
Sbjct: 317 PD 318


>gi|220907483|ref|YP_002482794.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864094|gb|ACL44433.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 264

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 7/171 (4%)

Query: 123 YLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKA 180
            LLE  + A  + Q+  A +  +  +++          L  E+  + G+  +A      A
Sbjct: 64  NLLEKGKKAQEKGQHQEAIKAFQRSVKLNPDNLSGYQ-LLSEAQFQAGEQEAAIATLQTA 122

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L   P+      A++    +A   S  +T   +      +   +      + SL      
Sbjct: 123 LKRKPN----DIAMLNTLGMAYLSSDRLTEAERILSQVTDLQPSNKTAYFSLSLVQQRLR 178

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               +  +A  + KL   +    +  A +      + KA    +++ K  P
Sbjct: 179 QFERAIENAQRAAKLEPENPHPLVVLAVTQWDMGDQTKAVQTYKQVLKKAP 229



 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 15/170 (8%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   G    A +   +++ ++PD     + + +    A E   AI  L    K     
Sbjct: 70  KKAQEKGQHQEAIKAFQRSVKLNPDNLSGYQLLSEAQFQAGEQEAAIATLQTALKRKP-- 127

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL-ISQNKKRKAE 280
           N    +  +  +  ++D+        +A   L    +   ++  A  SL + Q + R+ E
Sbjct: 128 NDIAMLNTLGMAYLSSDR------LTEAERILSQVTDLQPSNKTAYFSLSLVQQRLRQFE 181

Query: 281 VILEKIWKV------NPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
             +E   +       NPHP +    T     +    ++   ++ +   + 
Sbjct: 182 RAIENAQRAAKLEPENPHPLVVLAVTQWDMGDQTKAVQTYKQVLKKAPQY 231


>gi|270293487|ref|ZP_06199689.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274954|gb|EFA20814.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 283

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 31/189 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
               LAR  +S V    + + E L  L+   I + +R YN A    E +L++        
Sbjct: 108 GKDDLARIDYSLVLDIESDNQEAL--LMRAYIYMRQRNYNFAKSDYERLLKLAPRSYNGR 165

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     + G   +A       +                               +  ++
Sbjct: 166 LGLATLEQKEGKYEAALSILNAMIA-----------------------------EKGGES 196

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            +   +  A+L +AR+    D   +  +  D  E++KL  +   A +   +  +SQ KK 
Sbjct: 197 TRLTTQQYAVLYVARAGVEQDMKHVDLAMMDLEEAIKLDPSQTEAYLIRGQIYLSQKKKE 256

Query: 278 KAEVILEKI 286
            A+   EK 
Sbjct: 257 LAKRDFEKA 265


>gi|209528249|ref|ZP_03276714.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209491321|gb|EDZ91711.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 915

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 63/222 (28%), Gaps = 30/222 (13%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   M +Y        N+ + Y    QI      ++ A    +  + +        Y 
Sbjct: 51  GQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLSPNWADLHYH 110

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G++  A     KA+ ++P        +  +     +   AI  L Q   N  
Sbjct: 111 LGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMGLRLNERGDIDTAIKVLQQGGINCP 170

Query: 220 EWNRN---------------RAILLIARSLEN---------------ADKGDMIASYHDA 249
            +                   AI +   +L                   +G +  +    
Sbjct: 171 NFKEIFNTLGYLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLGWAWTYQGKLSEAIAAY 230

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +++ L  +  +A     K    +N  R+A    +K   + P
Sbjct: 231 QKAISLKPDLAIAYSNLGKLWQQKNNHRQAISYFQKAIAIEP 272


>gi|218247729|ref|YP_002373100.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|218168207|gb|ACK66944.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 249

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 11/162 (6%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                ++  AI    +  KN      N       R    ++ G    +  D  +SL L  
Sbjct: 70  KSRQGDYQGAIADFTEALKNNP----NDINAYYNRGFAYSNLGKFDLALADFSQSLILDP 125

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
             + A +      +     ++A     +  K+NP     H  +   Y +L   +     K
Sbjct: 126 KMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQ--K 183

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                  I+ +  E+         ++G   +A A    A +I
Sbjct: 184 DFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225


>gi|320591103|gb|EFX03542.1| mRNA splicing factor [Grosmannia clavigera kw1407]
          Length = 928

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 6/206 (2%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E    G L+ A+R   +A   +P+   +  A V+         RA   L   ++NA 
Sbjct: 599 LAKERLAAGHLDEARRVLGRAFSQNPNNEDIWLAAVKLEAENGFVDRARELLATARENAP 658

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRK 278
                   ++  R  ++   G   A+     E+L+L   +    +   +       +  +
Sbjct: 659 TDRVWMRSVVFER--QHGADGGSEAALTLVQEALQLFPGAAKLWMLKGQIYAEDLGRVAE 716

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN---KESVESLVIVSKIA 335
           A        K  P      +    L E     +K    L+        S E    + +I 
Sbjct: 717 ARAAYAAGVKAVPGSVALWLLLARLEEAAGAVVKARSVLDRGRQAVPRSPELWCELVRIE 776

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIF 361
              G++ QA A    A++  PR  + 
Sbjct: 777 RRAGNVAQARALMATALRQMPRSGLL 802



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 7/149 (4%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + E+ ++G    +      +L++  NS    + AA+   S   +     +LE+  +  PH
Sbjct: 532 ARESTNRGRYATARAIYGHALQVFVNSRTLWLAAAELERSHGSREAQFGVLERAVEAVPH 591

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            E     +A         +   ++    R    N  + +  +   K+  E G +D+A   
Sbjct: 592 SEVLWMMLAKERLAAGHLDEARRV--LGRAFSQNPNNEDIWLAAVKLEAENGFVDRAREL 649

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
              A + AP   +++     E+ +  +  
Sbjct: 650 LATARENAPTDRVWMRSVVFERQHGADGG 678


>gi|320106192|ref|YP_004181782.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319924713|gb|ADV81788.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
           saanensis SP1PR4]
          Length = 687

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 38/141 (26%), Gaps = 11/141 (7%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A E     L I      A   L       G ++ A +   + +   P        + +  
Sbjct: 252 AAEAYRRALDIENDNLDAQRGLANALLADGQMDKALKQFEEIVAAEPQDAQSYVRIAEIQ 311

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                +  A+  L + K    +                 ++   + +     E+ K   +
Sbjct: 312 RREGHYDEALVTLKKAKALVPDSEEL-----------TFNEALTLDALGRYDEAEKALTD 360

Query: 259 SIMASICAAKSLISQNKKRKA 279
            + A+     S     +  +A
Sbjct: 361 RLTAAAKTDNSYTDAERSNRA 381



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 61/177 (34%), Gaps = 15/177 (8%)

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           ++   ++   A +    +           +  +   +L    +S       A+      +
Sbjct: 44  RSGSYYHYGLAKIYEDLATSQGRSDYATQAIEEYKLALTADPDSTYLQDGMAELYFKVGR 103

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSE---NTVGKL-----KRALRLEEINK 322
            R+A  + +   K NP     H  +A IY   L     +   ++          L  +  
Sbjct: 104 IREAVQVSQDQIKKNPNDIEAHTLLARIYYRSLGNLQNSAQTQMVQLATAEYETLVRLQP 163

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKI 378
           ++VE+ +++ ++        +A  +   A  +    +E  L +A++  +   +  ++
Sbjct: 164 DNVENHLLLGQLYEIAHDSVKAEVQFKAAQGLDSNSEEALLNMARL-YSEQGDIQRV 219


>gi|257060651|ref|YP_003138539.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
 gi|256590817|gb|ACV01704.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
          Length = 1252

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 94/263 (35%), Gaps = 31/263 (11%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
                 A E    +L        ++Y L   + +IG+ + A++     L + P +     
Sbjct: 638 ANDLTGAKEAYNRILAREPKHPDSLYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWM 697

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++   Y   K++S+AI    Q      E N       +   L+   +     +     ++
Sbjct: 698 SLGNLYQEKKQFSQAINAYQQAL--LLEPNLVAVYNNLGYVLQQ--QSQWEEAISCYQKA 753

Query: 253 LKLCDNSIMASICAAKSLISQNK------KRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
           L++  N + A I  A  L SQNK       + A++ L+   K      +A          
Sbjct: 754 LEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA-------- 805

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLA 365
               ++   +  ++  ES E    +     + G +++A A    A+ + P++   +  L 
Sbjct: 806 ----IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861

Query: 366 QIEQANSHNTDKILYWTQSALHA 388
           QI Q  +          + A  A
Sbjct: 862 QIYQVQNQ--------LKKASSA 876


>gi|326431599|gb|EGD77169.1| crooked neck protein [Salpingoeca sp. ATCC 50818]
          Length = 732

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 33/283 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFA 156
             I  AR ++    +     N     L+   Q    +++Y  A    +  L         
Sbjct: 219 GEIDKARSVYERAVEFFGEDNISPELLVSFAQFEERQKEYERARTIYKYGLDRIPKEAA- 277

Query: 157 VYSLYFES----CRIGDLNS---------AQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
              L+        + GD              +Y  K ++ +P         ++    + +
Sbjct: 278 -RELFDAFTAFEKKYGDRKGVDSVILNKRQFQY-EKEVEENPHNYDAWFDYIRLAESSGD 335

Query: 204 WSRAITFLNQK-----KKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCD 257
             +A     +          K + R    L I  ++ E  D  DM  +       + L  
Sbjct: 336 VDKARDVYERAIANVPLVAEKRYWRRYIYLWIYYAVFEELDAKDMERTRAVYKACIDLIP 395

Query: 258 ----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                     + AA+  I Q +   A  +L +   + P  ++   Y  +  E  + +  R
Sbjct: 396 HKSFTFAKIWLLAAQFEIRQKRISSARKLLGRAIGMCPKDKLFKGYIEI--ELQLREFDR 453

Query: 314 ALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              L     E N  + ++    +++   +G  ++A     LA+
Sbjct: 454 CRTLYDKYLEFNASNCQTWTRYAELETVLGDEERARGIYELAV 496


>gi|255035498|ref|YP_003086119.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
 gi|254948254|gb|ACT92954.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
          Length = 1072

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 88/277 (31%), Gaps = 28/277 (10%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L   L+S    +   A ++      +H   N                 +  A ++ + +L
Sbjct: 452 LDRPLLSADKQDFHSAERLFELAEDEHAMRN-----------------FEGARQRYQAVL 494

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +  AT   A+  L     R G+      +A K +  +             +    + ++A
Sbjct: 495 EKEATHSGALIRLAEYHYRKGEYAQGLDFARKVMAENTYHGGANYLYGALHRKLGDLTKA 554

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              L+      +     R+      +     K D   +  DA ++L    N++ A     
Sbjct: 555 EEALSVAAWTME----YRSGAYTQLAGIALQKNDFEKAESDARKALDYNRNNLAAYQLLG 610

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEEINKESV- 325
            +L   NK  +A     + WK     +  + Y H        +   RA   + I  E   
Sbjct: 611 TALRKLNKPEQA----IETWKALLAIDPLSHYAHFEQYLLDPRQANRATFQDAIRNELPH 666

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           E+ + ++   +  G   +A     LA    P    +L
Sbjct: 667 ETYLELAMDYVNQGQNAEAKQLLALAPAY-PTVSYWL 702


>gi|259907716|ref|YP_002648072.1| Probable fimbrial biogenesis protein [Erwinia pyrifoliae Ep1/96]
 gi|224963338|emb|CAX54823.1| Probable fimbrial biogenesis protein [Erwinia pyrifoliae Ep1/96]
 gi|283477570|emb|CAY73486.1| Uncharacterized protein HI0366 precursor [Erwinia pyrifoliae DSM
           12163]
          Length = 243

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 58/164 (35%), Gaps = 7/164 (4%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             L++   + A   L   + Q P      + ++     + GD + A+ +  +AL  +P  
Sbjct: 36  AYLSKGNMDAARRNLQRALSQAPDDYRVQL-AMARYQQQTGDRSRAEHHYHRALAQAPSN 94

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +V            ++  A    +  +K++    R  ++          + G    +  
Sbjct: 95  GYVLNNYGAFLCGLGQYDAAQRQFSLARKDSANGLRADSVENSGYC--FLNAGQQEKARQ 152

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290
             +++++            A++     K R++   +L  +++ N
Sbjct: 153 ALVDAVQTDPT--KGLPMLAEAARRLGKGRRSESRLLLDVYQHN 194


>gi|156086974|ref|XP_001610894.1| u5 snRNP-associated subunit, putaitve [Babesia bovis T2Bo]
 gi|154798147|gb|EDO07326.1| u5 snRNP-associated subunit, putaitve [Babesia bovis]
          Length = 1040

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 86/224 (38%), Gaps = 26/224 (11%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A++     +  +P+    W+  A +++     + S A   +   +   K  +R   
Sbjct: 299 DIKKARKLLKSVIATNPNHAPGWIAAARIEELA--GKISSAREII--AQACEKCGDREDV 354

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L  AR            +     +++++   S+   + AA+   + N KR    IL K 
Sbjct: 355 WLEAARL------EKPEYAKAVLAKAVRMVPQSVKIWVEAARRESNVNDKR---RILRKA 405

Query: 287 WKVNPHP-EIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      L  E +    LKRA    E   +SV+  + ++++     S  +A
Sbjct: 406 LEFIPNSVRLWKDAISLEDETDAYVMLKRA---VECVPDSVDLWLALARLC----SYQEA 458

Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALH 387
                 A K  P   +I++  A++E++ + N   +       L 
Sbjct: 459 QKVLNEARKHLPTNADIWITAAKLEES-NGNQQMVEKIISRGLD 501


>gi|116071802|ref|ZP_01469070.1| TPR repeat [Synechococcus sp. BL107]
 gi|116065425|gb|EAU71183.1| TPR repeat [Synechococcus sp. BL107]
          Length = 293

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 76/197 (38%), Gaps = 8/197 (4%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EW 221
           +  ++G    A + A  A+ ++P+   +   + +  + + +   A   L + KK      
Sbjct: 55  QLLQMGQPKEAAQLAALAVRLNPNDERLWTVLAEAQLRSHQLDDASQSLAKAKKINPNNA 114

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKA 279
               A   IA   +  ++   +      I++       +   A I   K  I+     KA
Sbjct: 115 GLWFAEAAIALRAQQPEEAIPLIQRGLQIDANNAAAYFDLGNARIMQNKFAIALQSFEKA 174

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             I  + W+   +  +  ++     +  + + +R L+LE+    + E ++ ++    + G
Sbjct: 175 TEIKPEFWEALNNQAL-VLFELGEHDEAIRRWRRVLKLEQ----NAEPMLALAAALHQKG 229

Query: 340 SIDQAHAKAMLAMKIAP 356
             ++A + A  A+   P
Sbjct: 230 DENEALSLAKEALSKNP 246


>gi|325108079|ref|YP_004269147.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324968347|gb|ADY59125.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 693

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 15/179 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  ++ A N   A+K    V QQ   +      L    +A  ++ Y+IA       L+I 
Sbjct: 70  GEAALKAGNFREAKKQFQKVVQQDPNNATAHHRL--AYLADMDKDYSIAEIHYLAALRIE 127

Query: 151 ATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
                         L  E  R  D    +RY  KAL   P+  +    +   +    +++
Sbjct: 128 PKNADIACDLGYSYLLQE--RSDDS---RRYLEKALRFDPNHHYAKMNLATLHSQQGDYA 182

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA--RSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            A+  L Q     +       +        ++ A+    I+     ++  KL   S  A
Sbjct: 183 AAMAMLRQAVSEEEAQAHIAQLFPDGPPEGMQVANNTPEISPATRELQ-QKLAQRSGPA 240


>gi|299117455|emb|CBN73958.1| kinesin light chain-like protein [Ectocarpus siliculosus]
          Length = 846

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 49/276 (17%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPA--------TREFAVYSLYFESCRIGDLNSAQRYAT 178
                A+ +   A    +  L I          T  ++++ L   +   G  + A+    
Sbjct: 377 AMSWQAQGKLMEAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARGRFDEAETLFR 436

Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK---------KKNAKEW 221
           +AL I         P+      ++         +  A     +           ++ +  
Sbjct: 437 EALGINERAHGNRHPEVASCLNSLAALLQARGSYDEAEILFTRALEVDEACFGLEHPRVA 496

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRK 278
                +  + ++    ++ D + S        +        +      A   ++Q K  +
Sbjct: 497 AGLHNLAALLQAQGKHEEADRLQSRALKTWEREYGPEHPKLAAFLNNQATLRLAQGKPDE 556

Query: 279 AEV-------ILEKIWKVNPHPEIAN--------IYTHLLSENTVGKLKRALRLEE--IN 321
           AE        I+EK +    HPEIA         ++     +      +RAL++ E    
Sbjct: 557 AEKLGLRALSIVEKAYGPV-HPEIATCLNNLSALLHARRRDDEAEPLCRRALQISEQIYG 615

Query: 322 KESVESLVIVSKIAL---EMGSIDQAHAKAMLAMKI 354
               +    ++ +A      G  ++A      A+ I
Sbjct: 616 SNHPKIATCLNNLATQVQARGEFEEAEEMFTRALDI 651



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 46/169 (27%), Gaps = 31/169 (18%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA---------VYSLYFESCRIGDLN 171
           L  LL  Q      + + A       ++I  T             + +L       GD +
Sbjct: 670 LAGLLRCQ-----GKLDEAEPLYRKAVEIGET-VLGPDHPDLATWLNNLATLVRDRGDPD 723

Query: 172 SAQRYATKALD-----ISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +A+    +AL      + P  P +   V+          +   A     +     +  + 
Sbjct: 724 AAEPLQRRALAIGEKVLGPAHPDLGAQVINLASLLSAQGKTEEAERLFIRGLATLEAAHG 783

Query: 224 NR----AILLIARSLENADKGDMIASYHDAIESLKLCDNSI----MASI 264
                 A +L   +     +G    +      +L   +         ++
Sbjct: 784 PEHPDVAAVLSHYASMLHQEGRDAEAKELIKRALATVERFFGPSHPIAV 832


>gi|121702613|ref|XP_001269571.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1]
 gi|119397714|gb|EAW08145.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1]
          Length = 540

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 85/260 (32%), Gaps = 35/260 (13%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
              L +     +S     + +    ++  +        + A + L+M L +         
Sbjct: 212 ENSLRKAQDIAISMLRENNQDPDALMIRARAFYGLGDSDQALKLLKMCLGLDP------- 264

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                     D+ SA R       ++        A       A+++ +AI   ++     
Sbjct: 265 ----------DMKSAIRLLRTVQKLTRTKEEGNNAF-----KARDYRKAIELWSEALAVD 309

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +     A +L  R+    +  +   + +D  E+LKL  + I A    AK+        +
Sbjct: 310 PQNKDMNAKILQNRAQAYINLKEYDNAINDCSEALKLDPSYIKAQKMRAKAYGGAGNWEE 369

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A    + + + NP             +    +++RA    E+ K   +    +  ++ + 
Sbjct: 370 AVREYKAVAEANP-----------TEKGIAEEIRRAEF--ELKKAQRKDYYKILGVSKDA 416

Query: 339 GSIDQAHAKAMLAMKIAPRK 358
              D   A   +A++  P K
Sbjct: 417 SEQDIKKAYRKMAIQYHPDK 436



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               ++RAI    +  +         ++ L  R+         + +  DA  +L+L   +
Sbjct: 60  KDGNYNRAIEEFTKAIEINPSS----SVYLSNRAAAYLSANRYLEALEDAERALELDPTN 115

Query: 260 IMASICAAKSLISQNKKRKAEVIL 283
                  A+ L +  +  +A  +L
Sbjct: 116 SKIMYRLARILTALGRPAEALEVL 139


>gi|187925002|ref|YP_001896644.1| hypothetical protein Bphyt_3028 [Burkholderia phytofirmans PsJN]
 gi|187716196|gb|ACD17420.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN]
          Length = 620

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/220 (10%), Positives = 57/220 (25%), Gaps = 11/220 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A  ++  A +  E  L++      +  +       +G    A     + +++ P   
Sbjct: 117 AYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHA 176

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +            AI            +           +      G    +   
Sbjct: 177 GALNNMGMSLNALGRAEEAIPCFQTALAAEPRF----VAAHFNLANTFDATGRHAEAVAS 232

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303
              +L L  N   A      +L +  +  +A   LE+   ++P   +A       +  L 
Sbjct: 233 FKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALG 292

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +     +     +   +  +   + +  +   L      +
Sbjct: 293 AHGPAVRA--LDQALRLRPDLASAHMNRALAWLAQRDFAR 330


>gi|332298474|ref|YP_004440396.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
           brennaborense DSM 12168]
 gi|332181577|gb|AEE17265.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 705

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 4/165 (2%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                A      A       L +      ++ +L       GD  +A      A  + P 
Sbjct: 530 ALTLEASGDVTGAIPVYREALALDPKHVRSLINLGVIFLDSGDTETALSLLQSAAALEPS 589

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +   Y+  K+++ A+T+  +  K   + N  RA      +   A   D   + 
Sbjct: 590 NFEANNNLANAYLAQKKYTDAVTYFQKALKLDSKNNTVRA----NLAAAYASAEDYTNAQ 645

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              +E +K  + +  A    AK   + +    AE  L  + + NP
Sbjct: 646 TVYLEVVKADNKNWDACFDLAKVYTALHDTAGAEKWLVYLQEKNP 690



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 4/170 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL   ++   +   N A      +L++ A    A+  L       G+   A+ Y  KAL
Sbjct: 423 AYLEMARLLTQKNDTNGAVVAYREVLKLDAANGNALRELAAVYASAGNDKEAESYFKKAL 482

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            +SP+       V        + + A+++  +        N     ++   +L     GD
Sbjct: 483 ALSPEDALTNYNVSTVLFNQGKTAEAVSYAKKAYA----GNGKNVSIVYNYALTLEASGD 538

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +  +     E+L L    + + I      +       A  +L+    + P
Sbjct: 539 VTGAIPVYREALALDPKHVRSLINLGVIFLDSGDTETALSLLQSAAALEP 588


>gi|289662748|ref|ZP_06484329.1| histidine kinase-response regulator hybrid protein [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 653

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 18/203 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 70  RTLRAEPRTSLLPVVHVSAASIATGDMITGLEAGADAYLIHPVDPNVLVATLRTLLRARR 129

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +      +       A L    +     +    A+   AI +  L   
Sbjct: 130 AEEALRISEARFREIFEHISAPIAVVDANLHTHEANAAFQRLVGNATPGAAIHAAGLDQA 189

Query: 259 SIMASICAAKSLISQNKKRKAEVIL------EKIWKVNPH--PEIANIYTHLLSENTVGK 310
           S + ++  A  L  + +   A  +L      E  W+V+P+  P++  +      + T  +
Sbjct: 190 STVHALTTA--LAQRERWSGALTLLRDGKLCETEWRVSPYREPDLGLLMVE---DVTEQR 244

Query: 311 LKRALRLEEINKESVESLVIVSK 333
           L+   + +E++  + E    +++
Sbjct: 245 LREREQRQELDTATSELAHQIAQ 267


>gi|283850989|ref|ZP_06368274.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283573635|gb|EFC21610.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 209

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 65/168 (38%), Gaps = 6/168 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +A+ +   A  +    ++   +       L   +   G+L++   +  KA    P   
Sbjct: 35  AYVAKGRLIEAEAEFLQAVECSPSLAEGYVQLGGLAMNKGNLDACLEWNEKACRARPLFA 94

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   ++   E  +A   L +  K   ++ +  A L  A       KGD+ A+   
Sbjct: 95  VPYGNIGFVHLQRGEVDKAEKALRRAVKIDPKYVQALATLGSA----LFMKGDIDAAEFQ 150

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV--NPHPE 294
           + ++L++  N   A    A   + +   +KA+ ++++  +    PHP+
Sbjct: 151 STKALEIEPNFGPAINNLALVAMERGDFQKAKELMDRSRETGYEPHPD 198


>gi|225559693|gb|EEH07975.1| pre-mRNA-splicing factor CLF1 [Ajellomyces capsulatus G186AR]
          Length = 640

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185
             A    +  + ++P ++  A++  Y    +  GD              +Y  + +  +P
Sbjct: 222 ERARAIYKYALDRLPRSKSIALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQVKENP 280

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239
               +    V+    + +  R      +              R    L I  +L E  + 
Sbjct: 281 KNYDIWFDFVRLEESSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELET 340

Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            DM  +     E +KL            +  A+  I Q   + A   L       P  ++
Sbjct: 341 KDMDRARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQTARKTLGHAIGACPKDKL 400

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              Y  +     E    + K   +  + N  + ++ +  +++   +  ID+A A   L +
Sbjct: 401 FKGYIDIERQLFEFVRCR-KLFEKQIKWNPANCQAWIKFAELERGLDDIDRARAIYELGI 459


>gi|298527727|ref|ZP_07015131.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511379|gb|EFI35281.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 794

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 63/157 (40%), Gaps = 10/157 (6%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R  A     +++ + +      +  +   +L++  +   A +   +    Q   R +  
Sbjct: 26  ERRDAY--YQKAVTHFEGERYSLAEVEIRNALRIDPDFAKAQLLLGRVYFVQKNWRSSYA 83

Query: 282 ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            L     ++P     H  +  IY H+  E+   + K  L LE  +  + ++ +I++ + +
Sbjct: 84  ALNSAVDLDPDLLEAHLYLGRIY-HMAGESEQAEEKARLVLER-DPGNADAGIIMATVMI 141

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372
             G ++         +   P R+E ++LL+++    +
Sbjct: 142 RQGELEAGRMSLEEIIAAHPDREEPYILLSRVLAGQN 178



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 110/376 (29%), Gaps = 51/376 (13%)

Query: 57  LLFAVSRFFLSCPAMLFHMLHK-RNYDKGYKALYTGLM--SIAAHNIPLARKMHSYVSQQ 113
           LL A + F  + P M    L        GY      L    +   +   A +    V   
Sbjct: 409 LLLARAHFQNNEPLMAVEYLRGVSRSSPGYARARQELAEHHLGQGDHLRALQEIDRVLSA 468

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
              +      +    +   +   ++A E+  ++LQ         Y L       G+   A
Sbjct: 469 DPGNMPA--RIQRGDVLAMKGDASLAAEEYSLLLQDEEWAGTGHYKLGVLEASRGNFALA 526

Query: 174 QRYATKALDISP-----------------DAPWVTEAVVQQYVLAKEWSRAITFLNQKK- 215
             +  KAL  SP                         V +           +  L+    
Sbjct: 527 HSHLEKALARSPLNQQVLQARVMVDLSQNRVEEAGTYVQELRAEHPG-EAFLALLHGDVY 585

Query: 216 KNAKEWNRNRAILLIARSLEN-------------ADKGDMIASYHDAIESLKLCDNSIMA 262
              ++    R +  +A S+E              A+  +         ++L L   SI  
Sbjct: 586 LAGQDPVMAREMFALAASMEPEWMVPWTRKATLDAEAKNWKPGIAALEKALLLEPESIQV 645

Query: 263 SICAAKSLISQNKKRKAEV----ILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                       +K  AE     ILE+    W       +A +Y    S +   KL++AL
Sbjct: 646 GFMLGTFYEQAGQKDMAEKQYAAILERDPGFWPAAN--NLAFMYA---SSSEEQKLQKAL 700

Query: 316 RLE--EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
            L          ++L  +      +G++D A  K  LA +  P+         +  A   
Sbjct: 701 ELASKAAKSNHPQALDTLGWTHYRLGNLDMALEKLDLARQGDPQNLDIAYHLAVVLAEIG 760

Query: 374 NTDKILYWTQSALHAM 389
           +    L   + A+ + 
Sbjct: 761 DRVGALGVLEQAMSSP 776



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 72/258 (27%), Gaps = 9/258 (3%)

Query: 104 RKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            +            +  L   +L   +I     +   A EK  ++L+       A   + 
Sbjct: 78  WRSSYAALNSAVDLDPDLLEAHLYLGRIYHMAGESEQAEEKARLVLERDPGNADAGIIMA 137

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
               R G+L + +    + +   PD       + +          A+  L+   +   + 
Sbjct: 138 TVMIRQGELEAGRMSLEEIIAAHPDREEPYILLSRVLAGQNLAGNAVDVLSAGLEVLPDN 197

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                 L++A +       D   +  +    +     +    +          +  +A  
Sbjct: 198 R----TLMLAMAGVFESVQDYCGAEEEYRRIVAHDPGNGDMHLMLVHFFQRTGQVDEAMK 253

Query: 282 ILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             + +    P      +     ++        ++   +         +    +++  L+M
Sbjct: 254 EFQSLMLARPDDNRSYLGLGAMYMEESRFQDAVQVLEQGRAYLGGDYDLSFALAETYLDM 313

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G +  A A     +K  P
Sbjct: 314 GDVPAARAMLHEEIKRDP 331


>gi|209525653|ref|ZP_03274190.1| sulfotransferase [Arthrospira maxima CS-328]
 gi|209493822|gb|EDZ94140.1| sulfotransferase [Arthrospira maxima CS-328]
          Length = 729

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 52/165 (31%), Gaps = 9/165 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLL-----EVQIALAERQYNIAHEKLEMMLQIPATR 153
               A +    ++ Q    ++ L  +L       + AL   +Y  A      M+      
Sbjct: 231 EAIAAYRKAIAINPQQPEAHQRLTEILSRDQKTGEDALLGGRYEEAIAIYRDMVAAKPDY 290

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
            +  Y L      +   + A     +A++++PD  W    +        E  +AI    +
Sbjct: 291 SWGYYGLGLALLNLRQWSEAIEVFNQAINLNPDCFWSYNNLGYCLFKQGEIPQAIDAYRK 350

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                 E       + I        + D+  +    ++++K   +
Sbjct: 351 AIAIDPEIPE----VYIRLGDTLLQQQDIDGAIAAYLDAIKAQPD 391



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 54/197 (27%), Gaps = 27/197 (13%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +   G    A       +   PD  W    +  A++       +WS AI   NQ      
Sbjct: 267 ALLGGRYEEAIAIYRDMVAAKPDYSWGYYGLGLALLNLR----QWSEAIEVFNQAINLNP 322

Query: 220 E---WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +      N    L  +       G++  +     +++ +        I    +L+ Q   
Sbjct: 323 DCFWSYNNLGYCLFKQ-------GEIPQAIDAYRKAIAIDPEIPEVYIRLGDTLLQQQDI 375

Query: 277 RKAEVILEKIWKVNPHPEIANI---------YTHLLSENTVGKLKRALRLEEINKESVES 327
             A        K  P  EIA I         +  L  E          +         E 
Sbjct: 376 DGAIAAYLDAIKAQPDGEIAYIKLRHLRTYSFIKLQPEQIEAIASGYQQAISQVPHYPEP 435

Query: 328 LVIVSKIALEMGSIDQA 344
            +    +  E+G I  A
Sbjct: 436 YINYGDLLTEIGDISAA 452


>gi|171463927|ref|YP_001798040.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193465|gb|ACB44426.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 403

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 85/279 (30%), Gaps = 40/279 (14%)

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102
           +  + L      + + +  +R+ L     +      R     +K L   L++        
Sbjct: 4   IATAWLLLLPVMFGIGWLAARWDLRLENRMDERERMRQQRSTFKGLSL-LLNEQPDQAIE 62

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--------- 153
                + +  +    +  L  L   +      +   A    + +      +         
Sbjct: 63  TLVKIAQLDPETIELHFSLGNLFRRR-----GETERAIRVHQHLANRDDLKPRDRDHAAY 117

Query: 154 EFA---VY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-I 208
           E     +   L+  +    +     +YA  A           E++++ Y +  +W +A I
Sbjct: 118 ELGRDFLRAGLFDRAEASLNRVGDGKYAEPA----------KESLLEMYQIEHDWKKAII 167

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                +    K  +   A        E   + D+  +      +L+   N   A I    
Sbjct: 168 AANELETLQGKSHHTEIAQFHCELGQEALRRKDLAEAEQSIQRALQAVPNHARALILQGD 227

Query: 269 SLISQNKKRKAEVILEKIWK--VNPHPEIANIYTHLLSE 305
            L++ ++  +A     + W    + HP     Y HLL++
Sbjct: 228 YLMAMDRPTQA----IEAWGLIASSHP----AYMHLLAD 258


>gi|329956615|ref|ZP_08297188.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
 gi|328523987|gb|EGF51063.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
          Length = 1010

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 99/282 (35%), Gaps = 46/282 (16%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREF--A 156
             LA +M   +  + +   + L Y +  +    + + + A E     +   P       A
Sbjct: 722 AALAAQMPGVIRFEPS-EQDSLTY-IAAEKVYMKGEISPARESFIRYLQSYPNGAFSLNA 779

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ 213
            Y L        D  +   + +K L+  PD+P+  EA++   +     KE+ RA+    Q
Sbjct: 780 HYYLSLIGKEQKDETAVLEHTSKLLE-YPDSPYSEEALLMRGEILFNHKEYERALADYKQ 838

Query: 214 KKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSL 270
            +       R +  L  ++   +   D+ ++I +    +   KL       A    AK+ 
Sbjct: 839 LQARTTTAERRQLGLTGVLRCGVLLKDEIEVIQAATALLAEAKLSPELQHEALYYRAKAY 898

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           ++Q   +KA   L+                 +L+++T         L        E+  +
Sbjct: 899 LNQKAVKKAADDLK-----------------ILAQDT-------RTLYG-----AEAKYL 929

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQI 367
            +++    G    A  + +  +  +          F+LL+ +
Sbjct: 930 AAQLMYNAGDYAAAEKEILNFIDQSTPHAYWLARSFILLSDV 971


>gi|300937601|ref|ZP_07152410.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
 gi|300457331|gb|EFK20824.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
          Length = 889

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 230 WLAIQQGDAALKANNPDQAERLFLQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 287

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    + +A 
Sbjct: 288 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLSQQAE 347

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 348 ALENQGKWAQAAALQRQRLALDPGSVWVTYRLSQDLWQAGQRTQADTLMRNLAQQKPNDP 407

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
           ++          +  +   +A  ++   +           +L  + I   +  A  L   
Sbjct: 408 DQVYAYGLYLSGHDQERAALAHINNLPRARWNGNIQELVNRLQSDQI---LETANRLRDS 464

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K++ AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 465 GKEQDAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARTAYQNVLAR-ESNNADAI 518

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 519 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALVQAQLGDTAAAQQ 570



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R        +     +     + L     A   R Y  A    + +L   +    A+  L
Sbjct: 462 RDSGKEQDAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARTAYQNVLARESNNADAILGL 521

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 522 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALVQAQLGDTAAAQQTFNRLILQAKS 581

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  G+   +     +++
Sbjct: 582 QPPSMESAMVLRDGAKFEAQAGEPQQALETYKDAM 616


>gi|73544337|ref|XP_848063.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|321438417|emb|CBZ12171.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 1419

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 59/202 (29%), Gaps = 23/202 (11%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRN 224
            D   A     +A  + P    V E V   +V + ++++        +      A E +  
Sbjct: 962  DPELAATLYERAAAVCPTYLEVAEVVADVFVQSGDYAKGSVYMKRVMRANPSAATEMHMR 1021

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A +    + +    G  +      ++ L +    + A+  AA           A V++ 
Sbjct: 1022 LARIGTGSAWDTMSHGQRMEVMEHLLKGLGVAPERV-AAALAAGVQSELTNTNNANVVMS 1080

Query: 285  KIWKVNPHPEIANIYTHLLSENT--------------VGKLKRALRLEEIN-KESVESLV 329
                 N  P + +      SE+                  L R  R   +   +    LV
Sbjct: 1081 ---LGNLAPLLLDGVATATSEDAVCFATYVVQTRFQEPQLLNRMYRRALLRFPQHATILV 1137

Query: 330  IVSKIALEMGSIDQAHAKAMLA 351
              + + +  G    A      A
Sbjct: 1138 NYATLCMHSGCHTLARKYIAKA 1159


>gi|67526379|ref|XP_661251.1| hypothetical protein AN3647.2 [Aspergillus nidulans FGSC A4]
 gi|40740665|gb|EAA59855.1| hypothetical protein AN3647.2 [Aspergillus nidulans FGSC A4]
          Length = 1357

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 26/177 (14%)

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
              +   + SL  +++I +E+G ID A    + A+++ P          I ++     +K
Sbjct: 66  TSNSPAQLSSLNTIAEIYVELGEIDLARKHFLQAVELDPTGS-------IPESEGGGAEK 118

Query: 378 ILYWTQSALHAMPDPLWISDDGYLSSVWLPL-----SPISKTLCYFEWKIPTKSPEYISS 432
            L W                 G  S  W PL     S  S     F W+   +S      
Sbjct: 119 FL-WLAQLSE---------LGGKDSVQWSPLFFIAFSRASYQADIFRWEEDAESRCENLI 168

Query: 433 ENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFED--STIHPLDPHIRQPDDP 487
                    +       + +   +     +   +S   +    + P DPH+  PD P
Sbjct: 169 TEALLVQPSSPEVLQTLASIRISQLREDDARAALSRSLELWKDLPPEDPHV--PDFP 223


>gi|124516587|gb|EAY58095.1| putative TPR-domain containing protein [Leptospirillum rubarum]
          Length = 327

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 11/211 (5%)

Query: 160 LYFESCRI-GDLN--SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  +  R   D     A   A+  L+  P    +   ++   +L   +  A+  + +   
Sbjct: 20  LVPQIQRSLEDREWLKAYHLASSMLEKYPSNETLRYLLLDALILGGRYDNALDRVREFLG 79

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E +R    LL       + +  +        ESL   +      +  A SL    + 
Sbjct: 80  AMPENHRLNLYLLHLLVYHKSFEEALALGKSLLKESLTSMEKRD-VLLHTAFSLHGTGEL 138

Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           RKA  +L ++   +P + +    +  IY          +    L L E++        ++
Sbjct: 139 RKAVRMLNELLDEDPLNTDALETLGKIYFEQGHFEEAERY--FLELAEMDPAHPRVHQLL 196

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             +  E G  D+A  +   AM+IAP  E+  
Sbjct: 197 GLLYSEQGKWDEAIMEWEEAMEIAPSDEVLR 227


>gi|323449116|gb|EGB05007.1| hypothetical protein AURANDRAFT_72389 [Aureococcus anophagefferens]
          Length = 1474

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 119/386 (30%), Gaps = 74/386 (19%)

Query: 72   LFHMLHKRNYDKGYK------ALYT-GLMSIAAHNIPLARKMHSYV----SQQHTFHNE- 119
            L   L  +  + G        AL   G++  +  N    R +         +++   +  
Sbjct: 823  LERALAIKEREYGRDHALVASALTNLGIVHGSLGNYAKQRDLSERALVIFEREYGRDHPN 882

Query: 120  ---YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA---------VYSLYFESCRI 167
                L  L     +L         +  +  L I   R F          +  L      +
Sbjct: 883  VASALANLGSAHGSL--GDDAKKRDLFQRALAIDE-RVFGSEHTAVAATLGGLGNAFFSL 939

Query: 168  GDLNSAQRYATKALDIS-----PDAPWVTEAVVQQYVL---AKEWSRAITFLNQKKKNA- 218
            GD   A+    +AL I       D   V   +    +      ++++A     +      
Sbjct: 940  GDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAFFSLGDYAKARELYERALAIKE 999

Query: 219  KEWNRNR---AILLIARSLENADKGDMIASYH-----DAIESLKLCDNSIMASICAAKS- 269
            +E+ R+    A  L    + + D GD            AIE  +   + +  +I      
Sbjct: 1000 REYGRDHVQVASTLTNLGIAHGDLGDYAKKRELLERALAIEEREYGRDHVQVAITLGNLG 1059

Query: 270  --LISQNKKRKAEVILEKIWKV------NPHPEIANIYTHL------LSENTVGKLKRAL 315
                S     KA  + E+   +        H ++A+  T+L      L +    +     
Sbjct: 1060 NAFFSLGDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAHGDLGDYAKARELYER 1119

Query: 316  RLE----EINKESVESLVIVSKIALEMGSIDQAHA-----KAMLAMKIAPR----KEIFL 362
             L     E  ++ V+    ++ + L  G + +A       K  LA+K          + L
Sbjct: 1120 ALAIEEREYGRDHVQVASTLNNLGLAHGDLGEAAKACDLYKRALAIKEREYGRDHASVAL 1179

Query: 363  LLAQIEQA--NSHNTDKILYWTQSAL 386
             L  + +A     ++ K    ++ AL
Sbjct: 1180 TLTNLGKACNALGDSTKARDLSERAL 1205



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 97/330 (29%), Gaps = 65/330 (19%)

Query: 98   HNIPLARKMHSYVSQ--------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
             +   AR+++              H      L  L     +L    Y  A E  E  L I
Sbjct: 940  GDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAFFSL--GDYAKARELYERALAI 997

Query: 150  PATREFA---------VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWVTEAVV 195
               RE+          + +L      +GD    +    +AL I       D   V   + 
Sbjct: 998  KE-REYGRDHVQVASTLTNLGIAHGDLGDYAKKRELLERALAIEEREYGRDHVQVAITLG 1056

Query: 196  QQYVL---AKEWSRAITFLNQKKKNA-KEWNRNR---AILLIARSLENADKGDMIASYHD 248
                      ++++A     +      +E+ R+    A  L    L + D GD   +   
Sbjct: 1057 NLGNAFFSLGDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAHGDLGDYAKAREL 1116

Query: 249  -----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL- 302
                 AIE  +   + +  +       ++     +A              ++      + 
Sbjct: 1117 YERALAIEEREYGRDHVQVASTLNNLGLAHGDLGEAAKAC----------DLYKRALAIK 1166

Query: 303  LSENTVGKLKRALRLEEINK------ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              E        AL L  + K      +S ++  + S+ AL +   +     A +A+ +  
Sbjct: 1167 EREYGRDHASVALTLTNLGKACNALGDSTKARDL-SERALAI--FELGSEHARVAITLDN 1223

Query: 357  RKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
                ++ L         +  K     + AL
Sbjct: 1224 LGSAYIAL--------GDAAKARGLLERAL 1245


>gi|253999714|ref|YP_003051777.1| hypothetical protein Msip34_2008 [Methylovorus sp. SIP3-4]
 gi|253986393|gb|ACT51250.1| Tetratricopeptide domain protein [Methylovorus sp. SIP3-4]
          Length = 570

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 99/312 (31%), Gaps = 61/312 (19%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL------------LEVQIALAE-----RQ 135
           ++ ++ +  LA +           +   LV               E Q A  E      +
Sbjct: 76  LAKSSRDPRLAERAAKAA---VYGNKPRLVTQAVSLWSELDPSSTEAQQASTELFVNAGK 132

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
            N A   L+ +L    TR      L     +  D N+      +     PD P     + 
Sbjct: 133 LNEAKPFLQKLLAKEDTRANGFLYLNSLLAKQTDKNAVLTLVQELAAPYPDLPEAHFTIA 192

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              + A +   A++ L+  +K +  W    + LL  + L        I  Y   + + + 
Sbjct: 193 NSALAAGKVELAMSELDTAEKLSPGWE--MSALLKGQILYLQSPDAAINFYKQFLSANEN 250

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            +      +  A+ LI+Q +                       +     E         +
Sbjct: 251 ANEVR---LTMARLLINQKR-----------------------FDEAKPE--------FI 276

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK---IAPRKEIFLLLAQIEQANS 372
           +L   +K + E +V+V  ++++   +  A      A+      P + +F+ L QI +   
Sbjct: 277 KLISASKNNPEIMVVVGLLSIQANELGDAEKYFQDALAAGFKNPDQ-VFIYLGQIAEKQ- 334

Query: 373 HNTDKILYWTQS 384
           ++    L W   
Sbjct: 335 NDDKLALAWYNR 346


>gi|326665866|ref|XP_003198135.1| PREDICTED: dnaJ homolog subfamily C member 7-like [Danio rerio]
          Length = 516

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    ++ A ++  
Sbjct: 208 KVLKAECLALLGRYPEAQSVASDILRMDSTNGDALYVRGLCLYYEDC----IDKAVQFFV 263

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 264 QALRMAPDHEKARLACRNAKALKAKKEEGNKAFKEGSYEEAYELYTEALTIDPNNIKTNA 323

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R+   +    +  +  D  +++KL +  I A +  A+  +   +  +A    EK+
Sbjct: 324 KLYCNRATVGSKLNKLEQAIEDCTKAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDYEKV 383

Query: 287 WKVN 290
           ++  
Sbjct: 384 YQTE 387


>gi|149921781|ref|ZP_01910227.1| TPR domain protein [Plesiocystis pacifica SIR-1]
 gi|149817342|gb|EDM76816.1| TPR domain protein [Plesiocystis pacifica SIR-1]
          Length = 1013

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 91/310 (29%), Gaps = 56/310 (18%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ--YNIAHEKLEMMLQIP 150
           ++    + P A    +    +          L   +I   +       A           
Sbjct: 269 IATTHPDDPQAVSAANKQIAELRLE------LQVARIQELQGGEPTPEAEAAYN------ 316

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                    L   + R G L++A+    +A+D SP  P     + + +   + +  A+  
Sbjct: 317 -------RGL--SALRGGKLDTARAQLQQAVDESPWYPRAHYYLGEVHARQEHFPEAVES 367

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +     +        L +    E +   D   +      +L+L  +  +      +  
Sbjct: 368 FKRAIAMERYDYAAHMALGLLYKKEFSGAEDE-QARVHLDLALRLRPDLYVLHFHLGELY 426

Query: 271 ISQNK-------------------KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
              +K                   KR A    + I  +    E A  +      + V +L
Sbjct: 427 ARSDKEQAIGHFRRFRELCDADDPKRAAAK--DAILALQREVEEAEPFVPPPPPSNVDRL 484

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQA 370
             A  L  +     E+ V+ ++     G  D+A    +  +K  P +   L +LAQ+  A
Sbjct: 485 DPA--LYRLIS---EAYVLGAE----HGEWDRAEKLLINGLKQFPDETALLNILAQVVDA 535

Query: 371 NSHNTDKILY 380
                 +   
Sbjct: 536 Q-GEGGRARA 544


>gi|332291876|ref|YP_004430485.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169962|gb|AEE19217.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 460

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 20/183 (10%)

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----RSLE 235
           LDI P+   V EA+ + +   +++  A T + +      ++  + A +  +      +L+
Sbjct: 108 LDIKPNDVDVLEALYEVHFQQQDYDAAATTVKKLIGFDVQYKEDLARIYTSTKRYEEALD 167

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE- 294
             ++ D         + LK            +K         +    +E+    NP  E 
Sbjct: 168 LIEELDDEIGSDIYRDRLK------------SKLYALSGNTNRQVKEIEQNIASNPKSEA 215

Query: 295 --IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +  I  +    +T    + AL L+++N  + E  + + K  L  G ID+A A     +
Sbjct: 216 EYLKLILLYSEQGDTQKAYETALELQKVNPYADEVHLALYKFNLNDGKIDEAIASMQKVL 275

Query: 353 KIA 355
           +  
Sbjct: 276 EST 278


>gi|157812774|gb|ABV81132.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Triops longicaudatus]
          Length = 289

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  ++GSI +A      A+
Sbjct: 124 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDLGSIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   ++   +    H + L  L    I   +     A       L +      A 
Sbjct: 34  GQVQEAEDCYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++ + A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDINGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G +  +      +LKL  +   A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDLGSIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200


>gi|153871680|ref|ZP_02000790.1| TPR repeat containing protein [Beggiatoa sp. PS]
 gi|152071852|gb|EDN69208.1| TPR repeat containing protein [Beggiatoa sp. PS]
          Length = 658

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 13/186 (6%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +Y  A  + +   ++  T    +Y       R+     A  Y  KAL+I P   W    +
Sbjct: 440 EYETAMVQYQKATELQPTNSLYLYRTCTALDRLTRYEEAIPYCKKALEIKPTHHWTQIRL 499

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               +   ++  A        K+     + +A       L          +      +++
Sbjct: 500 AHGLLQIHQYQEAFKHCESVLKSESVTTQAKAGAFAISGLAQIGLNRPEIAIERCQIAIQ 559

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
           L      A  C    L  Q K  +A    E+                L  ENT+   K A
Sbjct: 560 LSPQEDWAYWCLGDVLSLQEKFGEAAKQYEQA-------------VKLKPENTLYNDKWA 606

Query: 315 LRLEEI 320
             L ++
Sbjct: 607 QTLAQL 612


>gi|313668665|ref|YP_004048949.1| periplasmic protein [Neisseria lactamica ST-640]
 gi|313006127|emb|CBN87588.1| putative periplasmic protein [Neisseria lactamica 020-06]
          Length = 614

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 98/323 (30%), Gaps = 79/323 (24%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184

Query: 237 ADKGDMIASY-----------------------------HDAIESL----KLCDNSIMAS 263
            D     AS                                AI +L    KL    +  +
Sbjct: 185 QDGLAQKASKAVRRASLEYGHLPEAAVADVVFSLQAREKEKAIAALQRLSKLDAEILPPT 244

Query: 264 ICAAKSLISQ-----------NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
             A +    Q              R     L   W+     EI N+ +    ++   +LK
Sbjct: 245 FIALRLTARQYPEILDGFFQQTDTRN----LSSAWQEM---EIMNLVSLRRPDDAYKRLK 297

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQ 366
               L + N  +     +  + A+   +  +  +     ++ A       ++    L A 
Sbjct: 298 ---VLLDANPNAD----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAA 350

Query: 367 IEQANSHNTDKILYWTQSALHAM 389
           +  A+  +  K+  W +  + A 
Sbjct: 351 MMYADRRDYTKVRQWLKK-VSAP 372


>gi|301163724|emb|CBW23278.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 478

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             A     K +D +P  P  WV  A  +     K++ +AI   +      +E+    A +
Sbjct: 188 EQAIVVFNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAIESCDFAIAADEEFG--EAHI 243

Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNS----IMASICAAKSLISQNKK-RKAEVI 282
           + A SL + +  +  I  Y  A++   L        I  +    ++    N+    A   
Sbjct: 244 IKAHSLFHLENIEGAIVEYRKALKYKTLSPEFTYMFIGLAYTQQENWAEANESYSMALRA 303

Query: 283 LEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEE-INKESVESLVIVSKIALE 337
           +E+       P +++IY++       +    +  R  RL + +  +  E  ++  +I +E
Sbjct: 304 IEEN-GNGSSPLLSDIYSNKALCASRQGDSEEAHRLCRLAKELAPQDAEPYLLEGRIYME 362

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362
             + D A A+  LA++ AP  + ++
Sbjct: 363 EDNFDLARAEWALALRYAPEADTWM 387


>gi|289678286|ref|ZP_06499176.1| peptidase aspartic, active site [Pseudomonas syringae pv. syringae
           FF5]
          Length = 513

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 17/208 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A LL+ R       GD   +  D  ++  +   ++      A    +  +  +A   L
Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRL 302

Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333
           ++        P  E+   Y    + +    +   KR  R   +      ++  S +  S 
Sbjct: 303 QQARDAGQLQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSN 362

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            A  +    +            P +++F
Sbjct: 363 DAQAIAYFKRVLDYQQTGDLQMPAQQVF 390



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L    +L                 TG  ++A  +   A        +       Y   L+
Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKASTGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
              IA    QY  A         +    AT          +  R+GD + A++   +A+ 
Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234
           +  + P   +A +  Y    + S A+  L Q +   +         A  L        +L
Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGQLQPGDEVQIAYFLSQAGDDQGAL 333

Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264
           +   + D             A  +++  +++   + 
Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369


>gi|302404259|ref|XP_002999967.1| DnaJ and TPR domain-containing protein [Verticillium albo-atrum
           VaMs.102]
 gi|261361149|gb|EEY23577.1| DnaJ and TPR domain-containing protein [Verticillium albo-atrum
           VaMs.102]
          Length = 510

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 65/194 (33%), Gaps = 10/194 (5%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPA 151
           +++AA     A  + S +S +    +  +  LL   Q  L++ + + A    +  +    
Sbjct: 8   LAVAA--ALFATPLVSALSAESIPSDLPVSELLSSAQSHLSKGETSDALLYYDAAVARDP 65

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           +     +        +G  + A     + L + PD       + +    + +W  A    
Sbjct: 66  SNYLTFFKRATTYLSLGRTSQATEDYNRVLSLKPDFEGAHIQLAKIRARSADWEGAKE-- 123

Query: 212 NQKKKNAKEWNRNRAIL-----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           + K  N    +   A L         +    + GD     H A E++   + ++      
Sbjct: 124 HYKLANKDAASPELAALDEAQGAAQLARGRREGGDFETCVHQAGEAIMTANRAVYLRELR 183

Query: 267 AKSLISQNKKRKAE 280
           ++   ++ +  +  
Sbjct: 184 SRCRFARGEVEEGM 197


>gi|242076856|ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
 gi|241939547|gb|EES12692.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
          Length = 1069

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 7/165 (4%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +   ++     A       +     P         L     + GDL S+     K L++
Sbjct: 322 ARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKFGDLKSSLGSFEKVLEV 381

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+     +A+   +  + E  +AI     KK    +   ++A + +   L  +D    +
Sbjct: 382 HPENCESLKAIGHIHAKSGETEKAIETF--KKVTRIDPKDHQAFVELGELLVESDWAAAM 439

Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286
                A   LK    ++   +          + +   AE   ++ 
Sbjct: 440 EYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFKEA 484


>gi|253702403|ref|YP_003023592.1| hypothetical protein GM21_3815 [Geobacter sp. M21]
 gi|251777253|gb|ACT19834.1| TPR repeat-containing protein [Geobacter sp. M21]
          Length = 399

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 6/195 (3%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL +GL      +   A             + +   YL       A+ + + A +  +  
Sbjct: 32  ALSSGLAFYQKKDYARATSELKRAISMDPTNTQAYKYL--AGAYQAQGKTDEAIKTYKYS 89

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L +  T+     SL     +    N A+R    A  + P        + Q YV  + +  
Sbjct: 90  LALDPTQASVHTSLGNVYLQQKKYNLAEREFKDAGKLDPTDTLAPYTLGQLYVQTERYGE 149

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A     +  + A         L    + E    G    +     +++KL      A    
Sbjct: 150 AEAQFKKVSRMAPTDPNPYYSLGAVYNKE----GKYADAVKQLTQAVKLRPKMEAAHFEL 205

Query: 267 AKSLISQNKKRKAEV 281
             +  +      A+ 
Sbjct: 206 GVAYAALGDTTNAQK 220



 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 50/148 (33%), Gaps = 7/148 (4%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             + +      A   ++  L    K D   +  +   ++ +   +  A    A +  +Q 
Sbjct: 18  LASQESQRAQLANGALSSGLAFYQKKDYARATSELKRAISMDPTNTQAYKYLAGAYQAQG 77

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           K  +A    +    ++P     H  + N+Y      N   +        +++     +  
Sbjct: 78  KTDEAIKTYKYSLALDPTQASVHTSLGNVYLQQKKYNLAER--EFKDAGKLDPTDTLAPY 135

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            + ++ ++     +A A+     ++AP 
Sbjct: 136 TLGQLYVQTERYGEAEAQFKKVSRMAPT 163


>gi|171318635|ref|ZP_02907781.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
 gi|171096143|gb|EDT41066.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
          Length = 607

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A    +    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 169 ARELARATGETRGPAILALQALL---VRGADRVAGLAVLKDMLKN--DMNRPEAQLAIAR 223

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             +     D   +     ++L++  + + A++     L       +A  I      V  +
Sbjct: 224 --QQLAVDDKEGAARSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D A A 
Sbjct: 278 PKSRDGRLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDASAY 337

Query: 348 AMLAMKIAPRKE------IFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++        ++ LAQI      N  +   W   
Sbjct: 338 LKQYVQLGDKQSNLDVGQGYIYLAQI-SIEQGNDAQASQWLDK 379


>gi|303273688|ref|XP_003056197.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Micromonas
           pusilla CCMP1545]
 gi|226462281|gb|EEH59573.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Micromonas
           pusilla CCMP1545]
          Length = 586

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 92/275 (33%), Gaps = 25/275 (9%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF-ESCRI-----GDLNSAQRY--AT 178
            ++         A +  +              + Y  ++  +     G++  A++   A 
Sbjct: 176 ARVLRQLGDNEGARQCYQ-----DGCDATGGDNAYIWQAWAVLEDSVGNIAKARQLYDAA 230

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A D +  A W    ++++      + RA   L +  +   E  R    L  +  +   +
Sbjct: 231 TAADKTHAAAWHAWGMLEK--NQGNFQRARDLLVKGVRLVPE-TRASPHLFQSLGVMAME 287

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVILEKIWKVNP-HPEI 295
           +  M  +    +   +    S  A++  A +L+   +     A  + ++  + +P +  I
Sbjct: 288 RRRMQEAREHFMAGTRTDAGSQSAALWQAWALLESREGNSDIARKLFQRGLQSDPENRYI 347

Query: 296 ANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +   + E+  G + RA  L     ++N      L  ++++    G+I  A       
Sbjct: 348 WLSWA--VHESRQGYVDRARSLLVKGCKLNPRDPPLLQALARLEAADGNISVARKLFEQG 405

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
            K+ P  +       + +    +  +     Q  +
Sbjct: 406 TKLDPLHQANWQAWALAEWKDGDVARARELLQRGI 440



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 81/251 (32%), Gaps = 14/251 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWV 190
                A +  +       T   A ++        G+   A+    K + + P    +P +
Sbjct: 218 GNIAKARQLYDAATAADKTHAAAWHAWGMLEKNQGNFQRARDLLVKGVRLVPETRASPHL 277

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            +++    +  +    A        +   +     A L  A +L  + +G+   +     
Sbjct: 278 FQSLGVMAMERRRMQEAREHFMAGTRT--DAGSQSAALWQAWALLESREGNSDIARKLFQ 335

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSEN--- 306
             L+    +    +  A     Q    +A  +L K  K+NP  P +      L + +   
Sbjct: 336 RGLQSDPENRYIWLSWAVHESRQGYVDRARSLLVKGCKLNPRDPPLLQALARLEAADGNI 395

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLA 365
           +V + K   +  +++     +    +    + G + +A       + ++PR      L  
Sbjct: 396 SVAR-KLFEQGTKLDPLHQANWQAWALAEWKDGDVARARELLQRGIWVSPRSYNACRLFH 454

Query: 366 Q---IEQANSH 373
               +E+   +
Sbjct: 455 AWGVLEEREGN 465


>gi|218131427|ref|ZP_03460231.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
 gi|217986359|gb|EEC52696.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
          Length = 1010

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 92/282 (32%), Gaps = 46/282 (16%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF--A 156
             LA +M   +  + +   + L Y +  +    + +   A       LQ  P       A
Sbjct: 722 AALAAQMPGAIRFEPS-EQDSLTY-IAAEKVYMKGELTPAKASFTRYLQSYPNGAFSLNA 779

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ 213
            Y L        D  +   +A K L+  PD+P+  EA++   +     KE+ +A+    Q
Sbjct: 780 HYYLSIIGKEQKDEVAVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQ 838

Query: 214 KKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSL 270
            +  A    R +  A  ++       D  ++I +    +   KL       A    AK+ 
Sbjct: 839 LQARATTAERRQLGATGVLRCGALLKDDIEVIQAATTLLTEAKLTPELQNEALYYRAKAY 898

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
           ++Q   +KA                         ++     K    L        E+  +
Sbjct: 899 LNQKAVKKAA------------------------DDLKLLAKDTRTLYG-----AEAKFL 929

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQI 367
           V++     G    A  + +  +  +          F+LL+ +
Sbjct: 930 VAQQMYNAGEYAAAEKEILNFIDQSTPHAYWLARSFILLSDV 971


>gi|26449774|dbj|BAC42010.1| unknown protein [Arabidopsis thaliana]
 gi|29029044|gb|AAO64901.1| At4g37460 [Arabidopsis thaliana]
          Length = 883

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 17/211 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146
           L  G+  +   N   A  +   V ++   + E L+          +R+   A     + +
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 358

Query: 147 LQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              PA  E          +   G+   A    TKAL   P++P V          +K+++
Sbjct: 359 QSNPAASEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 416

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+  L+   K  K+       L +A +      G+   +    ++S++L  N + A + 
Sbjct: 417 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 472

Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289
            A+         KA   +E+       +WK 
Sbjct: 473 LAQFYQELADHCKALECIEQVLQVDNRVWKA 503


>gi|323166987|gb|EFZ52726.1| cellulose synthase operon C domain protein [Shigella sonnei 53G]
          Length = 582

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 9   RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 68

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 69  TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 128

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 129 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 163


>gi|255262090|ref|ZP_05341432.1| TPR domain/sulfotransferase domain protein [Thalassiobium sp.
           R2A62]
 gi|255104425|gb|EET47099.1| TPR domain/sulfotransferase domain protein [Thalassiobium sp.
           R2A62]
          Length = 524

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 12/243 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQR 175
            N  +V     +      +   A  +   + L  P   E     L        + + A  
Sbjct: 6   PNPQMVKFKHARALQKAGKVKQAISEYRALILIAPKMAEAHFQ-LARLLIGELEYSKALN 64

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +   A   +P    V    +     A + SR  + + ++  +      ++A+L I  S  
Sbjct: 65  HLEVARKYAPLEKSVWRQTLHALNEANDLSRTQSVV-KEVGSGPLDKASKAVLWIDLSET 123

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             + GD   +     ++ K+       +   A++ +      K         K+N  P  
Sbjct: 124 LINLGDTKLAIKLCRDAQKVFPKQEQPTRMIARAHLHAGDFDKTAASCRSAIKIN--PGS 181

Query: 296 ANIYTHL-------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            + Y  L       + +  +  +K  L+ E    ++V     + K   ++   D A A  
Sbjct: 182 TDAYLGLAKVHKFKIDDPELQDMKALLKTELTEVDTVTLNFALGKAHDDIKDYDTAFAHY 241

Query: 349 MLA 351
             A
Sbjct: 242 KAA 244


>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 784

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 75/228 (32%), Gaps = 11/228 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +YN A    +  L++      A           G+ + A     +AL  +P   +    
Sbjct: 244 GEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRN 303

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +    E+ RAI   +   +     +   A     R L   +KG+   +  D  ++L
Sbjct: 304 RGDAFRNKGEYDRAIADYDHALR----LDPKSATAYNNRGLAFQNKGEYDRAIADYDQAL 359

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVG 309
           +L      A      +   + +  +A    ++  +++  P+ A  Y      L  +    
Sbjct: 360 RLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLD--PKSAAAYNGRGAALNKKGEYD 417

Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + +    +   +                  G +D+A A+   A+++ P
Sbjct: 418 RAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNP 465



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 17/198 (8%)

Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +Y+ A       +   P +        L F+    G+ + A     +AL + P      
Sbjct: 312 GEYDRAIADYDHALRLDPKSATAYNNRGLAFQ--NKGEYDRAIADYDQALRLDPKDAAAY 369

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                 +    E  RAI   ++  +     +   A     R      KG+   +  D  +
Sbjct: 370 TNRGAAFYRKGEHDRAIADYDEALR----LDPKSAAAYNGRGAALNKKGEYDRAIADLDQ 425

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH------LLSE 305
           +L+L             +   +    +A   L +  ++N  P+ A+ Y           E
Sbjct: 426 ALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLN--PKYADAYQERGVTFQARGE 483

Query: 306 NTVGKLKRALRLEEINKE 323
           +       A     +  E
Sbjct: 484 SDRALADLAEA-VRLKPE 500



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 15/230 (6%)

Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +Y+ A     + +   P +        L F   R G+ + A     +AL + P    + 
Sbjct: 40  GEYDRAIADYDQALRLDPKSAVAYTHRGLAF--YRKGEYDRAIADYDQALRLDPKYANIY 97

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                 +    E+ RAI   +Q  +     +   A++   R      KG+   +  D  +
Sbjct: 98  INRGLAFYRKGEYDRAIADYDQALR----LDLRDAVVYTNRGDAFRSKGEYDRAIADYDQ 153

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENT 307
           +L+       A      +  S+ +  +A    +   ++N  PE A  YTH      S++ 
Sbjct: 154 ALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLN--PEDAAAYTHRGLAFQSKSE 211

Query: 308 VGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             + +    +    + +     +         G  ++A A    A+++ P
Sbjct: 212 YDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 261



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 51/170 (30%), Gaps = 6/170 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL          A  +  Y         +   Y         + +++ A    +  L++
Sbjct: 338 RGLAFQNKGEYDRA--IADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRL 395

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A         + G+ + A     +AL + P            +    +  RA+ 
Sbjct: 396 DPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALA 455

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            LN+  +   ++    A     R +    +G+   +  D  E+++L    
Sbjct: 456 ELNEAVRLNPKY----ADAYQERGVTFQARGESDRALADLAEAVRLKPEL 501


>gi|163794161|ref|ZP_02188134.1| TPR repeat [alpha proteobacterium BAL199]
 gi|159180775|gb|EDP65294.1| TPR repeat [alpha proteobacterium BAL199]
          Length = 236

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  DL  A      A  + P        +        +   A   + +  +N  E +R 
Sbjct: 1   MRENDLTGALELFRHATGMDPTYSEAYFNLGIALRGVDDLEGAAEAIARALENDPENDR- 59

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              +L+   +   ++GD  A+    + +++L   +  A        ++ N    AE    
Sbjct: 60  ---VLVWAGVLAHERGDQHAAAELLMRAVELNPTNAEALHQLGDIFVALNSLPDAERCYR 116

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVSKIALE 337
               VN  P+IA  +  L   + + +L R             IN +    L  V+ + LE
Sbjct: 117 TAIDVN--PKIAGFHGKL--GSVLTQLHRLEEAHLSFGTALAINPDDAALLGGVALVYLE 172

Query: 338 MGSIDQAHAKAMLAMKIAPRK 358
            G +DQA   A  A+ I    
Sbjct: 173 QGDVDQARVHAERAVSIDNDS 193


>gi|115452613|ref|NP_001049907.1| Os03g0308800 [Oryza sativa Japonica Group]
 gi|108707757|gb|ABF95552.1| TPR Domain containing protein, expressed [Oryza sativa Japonica
           Group]
 gi|113548378|dbj|BAF11821.1| Os03g0308800 [Oryza sativa Japonica Group]
 gi|125586010|gb|EAZ26674.1| hypothetical protein OsJ_10578 [Oryza sativa Japonica Group]
          Length = 626

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 10/188 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  +   A++   KA+  SP   +                +A   L    K     N  
Sbjct: 290 IRAENNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLL----KIGHAVNPR 345

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             ++L + +L   +      +     ++ ++        I        +   R A  + +
Sbjct: 346 DPVILQSLALLEYNYSSPNTARVLFRKASQIDPRHQPVWIAWGWMEWKEGNARTARTLYQ 405

Query: 285 KIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESLVIVSKIALEM 338
           +   VN   E A          E   G    A RL      IN +S  + +  + +  E 
Sbjct: 406 RALSVNSTNECAARCLQAWGVLEQRAGNYTAARRLLRSSLNINSQSEVTWMTWAALEDEQ 465

Query: 339 GSIDQAHA 346
           G   +A  
Sbjct: 466 GDPVRAEE 473



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 11/213 (5%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W   AV+++        RA    +         +          ++    +G++  + + 
Sbjct: 180 WQCWAVLERK--GGNIRRARELFDAA----TVADAKHIAAWHGWAILEIKQGNIKKARNL 233

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSE 305
             + LK C  +       A       +  +A  + ++  + NP      +A     + +E
Sbjct: 234 LAKGLKYCGGNEYIYQTLALLEARAERFEQARTLFQQATQCNPKSCASWLAWAQVEIRAE 293

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           N     K   +  + + ++  S  + +    E GSID+A     +   + PR  + L   
Sbjct: 294 NNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLLKIGHAVNPRDPVILQSL 353

Query: 366 QIEQANSHNTDKILYWTQSAL--HAMPDPLWIS 396
            + + N  + +      + A        P+WI+
Sbjct: 354 ALLEYNYSSPNTARVLFRKASQIDPRHQPVWIA 386


>gi|33864077|ref|NP_895637.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33635661|emb|CAE21985.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 691

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 60/190 (31%), Gaps = 10/190 (5%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSL 160
             +  Y            ++L        E +   A         +        F +  +
Sbjct: 194 AALEQYRFALLLAPESPELHLNFASALKKEGKVEEAIASCRNAIELRPDFEAAYFGL-GI 252

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                  G+   A+    KA+D+ PD       +   +    E   A            +
Sbjct: 253 VL--KENGEFEEAKASYRKAIDLKPDFADAYLNLGHVFKDHGEAEEAKASYRTAIDLKPD 310

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +    A L +   L+  ++GD+  +     ++++L  + + A +     L  + +  +A 
Sbjct: 311 F--ADAYLNLGNILK--EEGDVEEAIASYRKAIELKPDFVDAYLNLGTVLNDEGEVEEAR 366

Query: 281 VILEKIWKVN 290
            I+  ++ +N
Sbjct: 367 QIVSALYNLN 376



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 18/205 (8%)

Query: 135 QYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +YN A E+    +L  P + E  + +      + G +  A      A+++ PD       
Sbjct: 191 EYNAALEQYRFALLLAPESPELHL-NFASALKKEGKVEEAIASCRNAIELRPDF-EAAYF 248

Query: 194 VVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        E+  A     +      ++    A L +       D G+   +      +
Sbjct: 249 GLGIVLKENGEFEEAKASYRKAIDLKPDF--ADAYLNLGH--VFKDHGEAEEAKASYRTA 304

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSEN 306
           + L  +   A +     L  +    +A     K  ++   P+  + Y +L        E 
Sbjct: 305 IDLKPDFADAYLNLGNILKEEGDVEEAIASYRKAIELK--PDFVDAYLNLGTVLNDEGEV 362

Query: 307 TVGKLKRALRLEEINKESVESLVIV 331
              + +    L  +N    ES ++V
Sbjct: 363 EEAR-QIVSALYNLNV-IEESSLLV 385


>gi|319761701|ref|YP_004125638.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317116262|gb|ADU98750.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 593

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 14/205 (6%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y  A + + A   +    +          +             D   +   A  +L   
Sbjct: 170 LYARAGDKALAARVVRLALEEELNNPATGPMAWTTVGRMYLAADDKARALEAAGNALAQN 229

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT--VGKLKRA 314
                A++ + + L  +N   +AE +L +     P PE+   Y  +L E+        + 
Sbjct: 230 PGDDGAAMLSLQLL--ENAVPEAEALLSRYLAGKPLPEVRMAYARVLLESQRLADAQAQV 287

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAP----RKEIFL---LL 364
             +     ++ ++ +I + + L+ G +DQA A        ++  P    R+       L+
Sbjct: 288 DAVTREQPDNAQAWLIRASLQLQAGELDQAEAALQRCTQLLEQDPATEQRQRALTQIYLM 347

Query: 365 AQIEQANSHNTDKILYWTQSALHAM 389
                    +  +   W      A 
Sbjct: 348 QSQIAEKRGDLAQAQAWLARIDDAE 372


>gi|196233660|ref|ZP_03132501.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196222330|gb|EDY16859.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 622

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 6/143 (4%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +  +  A+   ++ L   D  D         ++L L       ++  A  L  +N   
Sbjct: 85  KDDERKAEALAAFSQGLLAEDNADQEKMIDAYKKTLALDPTYAELAVKLAYELSRRNDPT 144

Query: 278 KAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               IL+   K  P        ++ +Y   L++  +G LK A +   +  ++  + + V 
Sbjct: 145 GGVQILKDTIKAAPKEAVPYIYLSQLYAKDLNKPDIG-LKYAEQALALAPDNFAAYLAVY 203

Query: 333 KIALEMGSIDQAHAKAMLAMKIA 355
           +I +  G   +A      A K  
Sbjct: 204 EIDMATGQSKKAEQLLDRAAKSE 226



 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 42/141 (29%), Gaps = 7/141 (4%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYN 137
              +   A   GL++    +     KM     +           L               
Sbjct: 89  RKAEALAAFSQGLLAE---DNADQEKMIDAYKKTLALD-PTYAELAVKLAYELSRRNDPT 144

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
              + L+  ++           L    +  +   +   +YA +AL ++PD      AV +
Sbjct: 145 GGVQILKDTIKAAPKEAVPYIYLSQLYAKDLNKPDIGLKYAEQALALAPDNFAAYLAVYE 204

Query: 197 QYVLAKEWSRAITFLNQKKKN 217
             +   +  +A   L++  K+
Sbjct: 205 IDMATGQSKKAEQLLDRAAKS 225


>gi|37520665|ref|NP_924042.1| serine/threonine protein kinase [Gloeobacter violaceus PCC 7421]
 gi|35211659|dbj|BAC89037.1| serine/threonine protein kinase [Gloeobacter violaceus PCC 7421]
          Length = 913

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 18/230 (7%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAV----VQQYVLAKE--WSRA--ITFLNQKKKNAK 219
            D   A  +  +AL + PD       +    + +++   +  W  A            + 
Sbjct: 555 KDNEYAIGFFKQALALDPDFALARSGLAVGYLNRFIYGGKVSWREAACREAGRAVALESG 614

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
               + A+      +E   +   +A Y  AI+   L  N   A    +  L S  +  + 
Sbjct: 615 LAEAHNAMAACYSQMELRLQPQAMAEYRRAID---LNPNFFSAMYNYSAILASLGRLDEG 671

Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
              ++K  +VNP     +  IA+ Y  LL E   G +     L  I  +     V   + 
Sbjct: 672 LYWMKKAVRVNPLCIGCYRSIAS-YYWLLGEAAKGDVWIDKGLALI-PDGARLHVSRGRA 729

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
            L  G  D+A   A+  +K  P     L LA   +  S   ++   + + 
Sbjct: 730 YLPRGRYDEARQIALQVLKEEPNNAEALSLAGTAERLSGRWERSRRYYER 779


>gi|323445550|gb|EGB02106.1| hypothetical protein AURANDRAFT_9360 [Aureococcus anophagefferens]
          Length = 155

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 33/116 (28%), Gaps = 2/116 (1%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           + P A +M++   +     +E    L    I      Y+ A       + +      A  
Sbjct: 32  DFPRAEEMYNEAIKLDANDSEAHRGL--GYIMYKRGDYDGAETSFGTAIHLDWNLAEAHR 89

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            L     R G+  +A +      ++ P        +        ++  A     + 
Sbjct: 90  GLAEVHLRKGNRVAALQSYRDVAELEPTHSLAFYKIFGMLAQDGDYVAAEQTFQKA 145



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 8/147 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
            ++H+     L  LLE         +  A E     +++ A    A   L +   + GD 
Sbjct: 12  DREHSLAYHGLGMLLEC----VRNDFPRAEEMYNEAIKLDANDSEAHRGLGYIMYKRGDY 67

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A+     A+ +  +       + + ++       A+    Q  ++  E     ++   
Sbjct: 68  DGAETSFGTAIHLDWNLAEAHRGLAEVHLRKGNRVAAL----QSYRDVAELEPTHSLAFY 123

Query: 231 ARSLENADKGDMIASYHDAIESLKLCD 257
                 A  GD +A+     ++  L  
Sbjct: 124 KIFGMLAQDGDYVAAEQTFQKAAGLNP 150



 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                A +    + ++  T   A Y ++    + GD  +A++   KA  ++P    
Sbjct: 99  GNRVAALQSYRDVAELEPTHSLAFYKIFGMLAQDGDYVAAEQTFQKAAGLNPPNSE 154


>gi|262091743|gb|ACY25332.1| tetratricopeptide repeat protein [uncultured actinobacterium]
          Length = 225

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 18/176 (10%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A +L+  +KG    +    I   + C+   +    A  SL    + R A   LEK    
Sbjct: 40  LALALDAFEKGRYQDAKRIIIPITRECEGVHLIHEIAGLSLYRLGQWRDAADHLEKARAA 99

Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES---VESLVIVSKIALEMGSI 341
            P     HP +A+ Y  L+    V +L     L++ + +     E  ++ +    + G I
Sbjct: 100 MPASTLNHPVLADCYRALMRYEKVDEL--WKELKDASPDPAIVAEGRIVAASAQADKGDI 157

Query: 342 DQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A  + M   K  P K        + +LA +    S +      W +   H  PD
Sbjct: 158 QNA-VRIMQQTKKDPAKVREHHLREWYVLADLYDR-SGDVINAREWFKKIAHNDPD 211


>gi|209875869|ref|XP_002139377.1| pre-mRNA-plicing factor 6 [Cryptosporidium muris RN66]
 gi|209554983|gb|EEA05028.1| pre-mRNA-plicing factor 6, putative [Cryptosporidium muris RN66]
          Length = 963

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 9/114 (7%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILL 229
           + A     K L + P++  +  A     +  K+W +A T L++   KN K      A + 
Sbjct: 731 DQALDIFEKGLLLCPNSVDLWLAATDILIGKKDWKKARTMLDRARLKNPKTPELWLATIR 790

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +  S  N+     I S     ++L+ C +S    I  A+++  ++  R++  +L
Sbjct: 791 LEESAGNSSITQQIMS-----KALRECPSS---GILYAEAIFLESNIRRSISLL 836


>gi|91976940|ref|YP_569599.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
           palustris BisB5]
 gi|91683396|gb|ABE39698.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
           palustris BisB5]
          Length = 629

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 90/283 (31%), Gaps = 47/283 (16%)

Query: 126 EVQIALAERQYNIAH-EKLEMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDI 183
           + +  + + +Y  A  E    + Q P      A         RIG  + A     +AL +
Sbjct: 112 KARSLIEQGKYAGAIVELDRAVKQDPKFPFAYAWRG--VAKMRIGKFDEAMSDFNEALKL 169

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P   +        +   ++  + +  +N       E +   A     R +  +D GD  
Sbjct: 170 DPRNAFALGQRGNAFFALRDNGKGLADVNAAL----EIDNTAAAPYAFRGMIYSDMGDQD 225

Query: 244 ASYHDAIESLKLCDNSIM--------------------------------ASICAAKSL- 270
            +  D   ++KL  N                                   A+  + +   
Sbjct: 226 KALADLTRAVKLNPNLPPAHGGLGSVYSKLQEFEKSLAAYNRALELAPNTAAYLSGRGYV 285

Query: 271 -ISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
             S  +  +A   + +   +N     P I     ++ + N    +K      +I  +++ 
Sbjct: 286 HFSLGEYDRAITDISQAIAINSRFARPYINRGRAYIATNNLSAAIKDFDEALKIEPKNIT 345

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           +L+  ++         +A A    A+K+ P   +   +A IE+
Sbjct: 346 ALLQRAQAFERSRDFAKAQADLQDALKLVPSHPVA--VAGIER 386


>gi|330961725|gb|EGH61985.1| TPR repeat-containing protein [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 556

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 97/276 (35%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  E LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQETLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YRIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           SA + A       P       A   Q   A  +  ++ ++ +  +   +      + L A
Sbjct: 84  SALQTALIWAKNDPKNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGD-THFDFLALSA 142

Query: 232 RSLENADKGDMIASYH------------------------DAIESLKLCDNSIM------ 261
              +   +  ++ S+                         DA +SLKL +++        
Sbjct: 143 AETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDAEQSLKLLEDNPPKEGEVA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + D+A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 94/293 (32%), Gaps = 12/293 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            K+      Q    ++ L + L   + L  + ++ A   LE ++   A  + A  +L   
Sbjct: 254 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWDEAAGYLEELIARGAHVDSAHLNLGRI 312

Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                D  SA   YA   +   PD            V     + A   L + +    ++ 
Sbjct: 313 HEERDDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLAEARAEEPDYA 370

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L +  +        +   +    ++LK   + +      A     +N   + E  
Sbjct: 371 IQ---LYLIEAETLTSNDQLDRGWQVLSQALKQYPDDVNLLYTRAMLAEKRNDLTQMEKD 427

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEM 338
           L  I K  P   +A         +   +   A  L     +IN +    L  +  +   M
Sbjct: 428 LRTIIKREPENAMALNALGYTLSDRTTRYAEARELIEKAHKINPDDPAVLDSLGWVNYRM 487

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           G++D A      A++  P  E+   L ++  A     +    W   AL   PD
Sbjct: 488 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAKGEQREARKVW-AKALEQQPD 539



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 73/205 (35%), Gaps = 7/205 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    + ++  N   A K  +    +        +YL+E +   +  Q +   + L   L
Sbjct: 340 LRQADILVSNGNGAEAAKRLAEARAEE-PDYAIQLYLIEAETLTSNDQLDRGWQVLSQAL 398

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206
           +        +Y+    + +  DL   ++     +   P+      A+          ++ 
Sbjct: 399 KQYPDDVNLLYTRAMLAEKRNDLTQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYAE 458

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   + +  K   +       +L +    N   G++ A+     ++L+   +  +A+   
Sbjct: 459 ARELIEKAHKINPD----DPAVLDSLGWVNYRMGNLDAAERYLRQALERFPDHEVAA-HL 513

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
            + L ++ ++R+A  +  K  +  P
Sbjct: 514 GEVLWAKGEQREARKVWAKALEQQP 538


>gi|327274288|ref|XP_003221910.1| PREDICTED: tetratricopeptide repeat protein 21A-like [Anolis
            carolinensis]
          Length = 1317

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 87/287 (30%), Gaps = 50/287 (17%)

Query: 127  VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             Q+ L +   +       ++LQ   T E     +     R      A       L+ +PD
Sbjct: 925  AQLYLLQGDTDQCEHYCTLLLQDDDTSEVGTMMMANLMFRKEKYEQAISLYRDVLEKTPD 984

Query: 187  APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               V E ++     + +   A TF    KK +   +           L +        + 
Sbjct: 985  NFSVMENLIDLLRRSGKLEEATTFFELAKKKSSRMSLEPGFNYC-MGLYSWHMMQPNQAL 1043

Query: 247  HDAIESLK----------------LCDN-------------SIMASICAAKSLISQNKKR 277
                ++ K                L  +             ++  S    K    Q+  R
Sbjct: 1044 RFFNKARKDSDWGQKALSYMIQICLNPDNEIIGGEMFENQNNMETSGLKEKRESEQHGIR 1103

Query: 278  KAEVILEKIWKVNPHP-------EIANIY---THLLSENTVGKLKRALRLEEINKESVES 327
             AE +L++ +   PH        E+   Y         N    LK    + +  +++V +
Sbjct: 1104 TAEKLLKEFY---PHSQEGQNQVEMLQSYCLMATKEKHNVEKALKVFTEMGQNERDNVPA 1160

Query: 328  LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-------IFLLLAQI 367
            ++ +++  + +    +A  +     K+             ++LLA I
Sbjct: 1161 ILAMAQAYVILKHTPKARTQLKRLTKVNWSLRDADELEKAWILLADI 1207


>gi|326919998|ref|XP_003206263.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Meleagris gallopavo]
          Length = 1167

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 104/306 (33%), Gaps = 43/306 (14%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517

Query: 141 EKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           +  +  + + P   +  +  L   +   G+   A  +  +AL I+ D P     +   ++
Sbjct: 518 KLYKNILREHPNYVDCYLR-LGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHL 576

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHD 248
             +EW        +  K     N   ++L +            R  E  +K     +   
Sbjct: 577 AKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAI 635

Query: 249 AIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANI 298
             + L+    N   A    ++ A K    + +      R+A   +  +W       +A+I
Sbjct: 636 YKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHI 690

Query: 299 YTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           Y       +  ++      +  +   ++ E L+ +++   + G + +     + A  +AP
Sbjct: 691 YVEQKQYISAVQMYENCLRKFYKH--QNTEVLLYLARALFKCGKLQECKQTLLKARHVAP 748

Query: 357 RKEIFL 362
              + +
Sbjct: 749 SDTVLM 754


>gi|302338948|ref|YP_003804154.1| hypothetical protein Spirs_2446 [Spirochaeta smaragdinae DSM 11293]
 gi|301636133|gb|ADK81560.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 678

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 95/316 (30%), Gaps = 31/316 (9%)

Query: 51  FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110
           F+ A +                          K  +    G  +  +    LA +++   
Sbjct: 11  FVPALLFFLICINVLWG-------------QSKAVELYTQGEAARNSGKSELAMELYKAS 57

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEK--LEMMLQIPATREFAVYSLYFESCRIG 168
            Q++  + E  + L   +IA  E     A         L   A     +         +G
Sbjct: 58  LQENPNYREPYLRL--AEIAFYEGSSEEALAYADTAAKLGKEACDVDVLRG--RILTDLG 113

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
               AQ   +  L   P+      A+ +  +      RA+ + ++      +     A+L
Sbjct: 114 RFTEAQELLSTVLSKQPNLVSAYRAMGELEIARGSLRRALVWYDRAL--NIDPVNRIALL 171

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                 +  ++ +        + +++L   S    + AA+  +  N   +AE   +   +
Sbjct: 172 SSVPVTDALEQWNDSE--QVLLRAVELYPESFFVHLTAARHYLEINDLSRAEYHCDVALR 229

Query: 289 VNP-HPEIANIYTHLLS-----ENTVGKLKRALRLEEINK--ESVESLVIVSKIALEMGS 340
           + P + +    Y  +LS     E+ + +L             +      +       +G 
Sbjct: 230 IEPENRDALLFYALVLSRQGRYEDLLNRLNSGDSKGSSASLLDDYLGYYLKGSAQKALGR 289

Query: 341 IDQAHAKAMLAMKIAP 356
             +A       +++ P
Sbjct: 290 YPEALDSFSAVLRLRP 305


>gi|262305025|gb|ACY45105.1| acetylglucosaminyl-transferase [Phrynus marginemaculatus]
          Length = 290

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GLVQEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ ISP        +        +   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 15/168 (8%)

Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A +    AL + P        +            A     +  +   E+    A   
Sbjct: 36  VQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAH 91

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +     +G +  +     E++++      A      +L      + A     +  ++
Sbjct: 92  SNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQI 151

Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           NP     H  +A+I  H  S N    +       ++  +  ++   ++
Sbjct: 152 NPAFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 197



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++  T   ++ +L       G +  A R   KAL++ P+
Sbjct: 27  ANALKEKGLVQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  + +  +    A           + GD+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYEARMKKLVSIVADQLEKNRLPSVHPHH 236


>gi|119489046|ref|XP_001262823.1| heat shock protein (Sti1), putative [Neosartorya fischeri NRRL 181]
 gi|119410981|gb|EAW20926.1| heat shock protein (Sti1), putative [Neosartorya fischeri NRRL 181]
          Length = 581

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 16/153 (10%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                  +  A E     L    T      + +             A+  A K   I P 
Sbjct: 342 AYEKLGDFTQAIEYYHKSLTEHRTPDALTKLRN----------AEKAKDKAEKEAYIDPA 391

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  + Q+     +W  A+    +  K A    R        R+           + 
Sbjct: 392 EAEKARELGQKKFQEADWPGAVEAFTEMTKRAPSDPRG----FSNRAAALIKLMAFPQAV 447

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            D  E+++     I A I  +++L++  +  KA
Sbjct: 448 QDCDEAIRRDPKFIRAYIRKSQALVAMKEYSKA 480


>gi|86609433|ref|YP_478195.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557975|gb|ABD02932.1| tetratricopeptide repeat protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 359

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 8/161 (4%)

Query: 202 KEWSRAIT--FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             WS A     L+    N        A+ L   SL  A  G    +      ++ +  NS
Sbjct: 83  GGWSSAQAQVLLHVPLPNGGLMQAQ-ALQLATDSLRLAQFGQTEEALRRLQLAVAMVPNS 141

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRAL 315
                      +      +A   L+K   ++P  + A +Y     +L   +     +   
Sbjct: 142 SELLYVLGNVHLELGDLEQAIASLQKARALSPQ-DGAVLYSLGSAYLRQGSYFAAAETLE 200

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           R   +  ++  +   +    L +   D A  +    +++ P
Sbjct: 201 RAVALQPDNPNARFQLGNAYLMLDRWDAARQEYEKTLQLDP 241



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 86/286 (30%), Gaps = 55/286 (19%)

Query: 83  KGYKALYTGL-MSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAE------- 133
           + ++AL  GL + +       A+        Q   H       L++ Q            
Sbjct: 67  RPWRALSVGLAVVLGMGGWSSAQ-------AQVLLHVPLPNGGLMQAQALQLATDSLRLA 119

Query: 134 --RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
              Q   A  +L+  +  +P + E  +Y L      +GDL  A     KA  +SP    V
Sbjct: 120 QFGQTEEALRRLQLAVAMVPNSSEL-LYVLGNVHLELGDLEQAIASLQKARALSPQDGAV 178

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             ++   Y+    +  A   L +      +    R    +  +    D+ D  A+  +  
Sbjct: 179 LYSLGSAYLRQGSYFAAAETLERAVALQPDNPNAR--FQLGNAYLMLDRWD--AARQEYE 234

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           ++L+L      A          Q     A                               
Sbjct: 235 KTLQLDPAYWPAMNNMGLVDYEQGDLDAA------------------------------- 263

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + R  R  E+N    E  + ++      G  ++A      AM++ P
Sbjct: 264 IDRWERTIEMNNAVAEPYLALATALYIRGETERAEELGAKAMRLDP 309


>gi|86159834|ref|YP_466619.1| hypothetical protein Adeh_3415 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776345|gb|ABC83182.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 638

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 7/207 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+GD   A+R   +AL   P +  V  A+          + A+  L           R R
Sbjct: 150 RLGDREGAERDLRRALAQRPSSGAVRIALGTLLRRRGAVAEAVALLEPAAAAGSNEERAR 209

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A  L+A    +   G    +     +++      +   +  A++ +  +       +   
Sbjct: 210 A--LVALGAAHLAAGRRAEATRAFDQAVLYAPARVEIRLGVARAWLGGDAGDADRALAVL 267

Query: 286 IWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
               +  P++  ++  L      + +  G  +   R   ++  +  S   V ++AL    
Sbjct: 268 ARAADLAPDVPAVHAALGRARERTGDGAGAAEAYERALRLDPSNRYSRRRVLRLALAARD 327

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQI 367
             +A  +A   +   P       LA +
Sbjct: 328 FARARHEADRLVTDGPEVAEHHFLAAL 354



 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 53/179 (29%), Gaps = 35/179 (19%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P       A+ Q    A+ +  A+  L +  +    ++       ++  +  A
Sbjct: 439 RRAVELDPRHAPGWLALGQLQSDARRFDEAVASLRRALEARPGYD----AAELSLGVTAA 494

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             G    +       L     S  A      +L+     R+A     +            
Sbjct: 495 RAGRTAEAIAAYRRVLARSPRSATAWYDLGLALLDAGDPRQAGDAFRQA----------- 543

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                                 I+ + V S    +++ L  G + +A A+    + + P
Sbjct: 544 --------------------AAIDPDHVPSRRKTAELELGSGRVAEARARFEELLDLVP 582


>gi|310824377|ref|YP_003956735.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397449|gb|ADO74908.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 3177

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 9/186 (4%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAV 157
            +A K    +      H   L  L   + +   +    A         + + P     A 
Sbjct: 371 QVAVKALHELLGLKPDHLPSLKSL--ARASDLAKDRAGAVRAYRRLAALARDPVEAADAH 428

Query: 158 YSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             L    +    D+  A+ +   AL ++PD P     + +      E  RA+  L++ ++
Sbjct: 429 VHLARLCAQTEDDIAGARLHCEAALRLAPDQPDALLLLGELCHRGGEHLRALKALDRLRE 488

Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 E +R     L+A  +       +  +     E++ L          AA+   S 
Sbjct: 489 VALARHELDRVGQANLLAGRVWEEGLQQLDNALLRYREAVTLLPGEAEPLFAAARVAESL 548

Query: 274 NKKRKA 279
            K ++A
Sbjct: 549 GKVQEA 554


>gi|302343448|ref|YP_003807977.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
 gi|301640061|gb|ADK85383.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
          Length = 385

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 82/262 (31%), Gaps = 11/262 (4%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
            +RN D    A   G   +AA     A  + S+              L   +   A ++ 
Sbjct: 129 KRRNPDPVDVAFERGKALLAAGKPDQA--LESFDEALKLSPKSPRTLLAIGEALEALQKD 186

Query: 137 NIAHEKLEMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
             A  + +    +   R   A   L     ++GD   A ++  +A  ISP        + 
Sbjct: 187 EEALSRYKEAANLAE-RFVKAHDRLATLYQKMGDAEEATKHLRRAAKISPRNARRQLNLG 245

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +  +        +        NA+   +    L           G    +     E++ +
Sbjct: 246 KALIEQG----MLEEGMAALTNAQNAAKKDPDLFSEVGEVLLSAGLNEQAAEAFSEAVSI 301

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLLSENTVGKLKR- 313
             N +        +   Q +   A  +  +   V P  E +       L E+   K  R 
Sbjct: 302 DPNMVHLYNRLGIAYRRQKRYDDALRVYGQAMSVAPDDENLLYNMALALIESKRAKEARV 361

Query: 314 -ALRLEEINKESVESLVIVSKI 334
              +  ++ ++  E+ V+++K+
Sbjct: 362 CLQKALQLREDFKEARVLLAKL 383



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +  + A +  +A+   ++  K +      R +L I  +LE   K +   +     E+  L
Sbjct: 144 KALLAAGKPDQALESFDEALKLSP--KSPRTLLAIGEALEALQKDE--EALSRYKEAANL 199

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENTVG 309
            +  + A    A          +A   L +  K++P        +        + E  + 
Sbjct: 200 AERFVKAHDRLATLYQKMGDAEEATKHLRRAAKISPRNARRQLNLGKALIEQGMLEEGMA 259

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            L  A    + + + + S   V ++ L  G  +QA      A+ I P
Sbjct: 260 ALTNAQNAAKKDPD-LFSE--VGEVLLSAGLNEQAAEAFSEAVSIDP 303


>gi|253997194|ref|YP_003049258.1| hypothetical protein Mmol_1827 [Methylotenera mobilis JLW8]
 gi|253983873|gb|ACT48731.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
          Length = 591

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 94/277 (33%), Gaps = 30/277 (10%)

Query: 130 ALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           A     YN A +  +  +      T +  +Y L   + +     +A  +  K +   P  
Sbjct: 317 AFQTNDYNEAEKDFKQAIAHNFKDTDQIYLY-LGQTAEKQKHDVAAMSWYNK-VSSGPRY 374

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA--S 245
                 +       +   +AI  L+          +   ++    +L   DK +  A   
Sbjct: 375 LEAQFNLANLIARTQSTDKAIELLDN--LEDLNVEQQILVIKAQAALLAKDKRNQEAFDL 432

Query: 246 YHDAIESLKLCDNSIMASICAAKSLIS----QNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              A+++L      +     AA+ L      +++ R+A  I EK       P+ A  Y +
Sbjct: 433 LEKAVKNLPNTPELVYDYALAAERLAKFDVMESELRRA--IAEK-------PDFAAAY-N 482

Query: 302 LLSENTVGK---LKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            L  +   +   LK A+ L E    +       L  +       G++D+A      A +I
Sbjct: 483 ALGYSFADRNIKLKEAINLIEKALTLAPNDHYMLDSLGWAHYRKGNLDKAIQYLEQAFRI 542

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            P  EI   L ++             W+  AL A PD
Sbjct: 543 NPDPEIAAHLGEVLWQKGEFEKAKKVWSD-ALTADPD 578



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 12/193 (6%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYS 159
            K    +      + E  + +++ Q AL  +      E      + +  +P T E  VY 
Sbjct: 392 DKAIELLDNLEDLNVEQQILVIKAQAALLAKDKRN-QEAFDLLEKAVKNLPNTPEL-VYD 449

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNA 218
               + R+   +  +    +A+   PD      A+         +   AI  + +    A
Sbjct: 450 YALAAERLAKFDVMESELRRAIAEKPDFAAAYNALGYSFADRNIKLKEAINLIEKALTLA 509

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              +     +L +    +  KG++  +     ++ ++  +    +    + L  + +  K
Sbjct: 510 PNDH----YMLDSLGWAHYRKGNLDKAIQYLEQAFRINPD-PEIAAHLGEVLWQKGEFEK 564

Query: 279 AEVILEKIWKVNP 291
           A+ +       +P
Sbjct: 565 AKKVWSDALTADP 577


>gi|260811027|ref|XP_002600224.1| hypothetical protein BRAFLDRAFT_66729 [Branchiostoma floridae]
 gi|229285510|gb|EEN56236.1| hypothetical protein BRAFLDRAFT_66729 [Branchiostoma floridae]
          Length = 1639

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 51/220 (23%)

Query: 202  KEWSRAITFLNQKKK-----NAKEWNRNR--AILLIARSLENADKGDMIASYHDAIESLK 254
             +  +A T   Q  +     +  E  R+   A +L        D GD   +     ++LK
Sbjct: 1066 GDLQKARTCYEQALQMTKTIHGAEEARHPDIANILNGLGCVWDDAGDNEKARALWEKALK 1125

Query: 255  L--------CDNSIMASIC--AAKSLISQNKKRKAEVILEKIWK-------VNPHPEIAN 297
            +          +   A +      +L       KA    E+  K          HP+IA 
Sbjct: 1126 MYQDIYGPTTPHHDTAVVLHNMGIALGKSGNYFKAISSYEEALKMTEEVLGNTKHPDIAL 1185

Query: 298  IYTHLLS---------------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            +   L S               E  +   K     E  +    ESL  +++   E+G   
Sbjct: 1186 LLGTLGSACHEAGKYTKSLQYHERALEINKAFHGQEAAHPSIAESLCNLAEAHKELGDHT 1245

Query: 343  QAHAKAMLAMKIAPRKEIFLLLAQIEQA--NSHNTDKILY 380
            +A      A+           + +I      +H  D++ +
Sbjct: 1246 KAAQLYEEALN----------MTKIIHGANETHGEDEVRH 1275


>gi|91203975|emb|CAJ71628.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 301

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 17/230 (7%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A +  +  L+  +    A   L F      D   A  Y  KA  + PD       +
Sbjct: 27  NSEQAIDAYKQSLKSDSAFTDAYVKLGFIYLARNDYGEALHYLQKAASLEPDNAETLNNL 86

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              Y     ++ A     +      E     A++ IA+ LE   +G+   +     +++ 
Sbjct: 87  GYVYEKMFRFASAKQMYKKALTINPE--NIEALVNIAKILEL--EGNYNGAIEQYKKTIA 142

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTV 308
              ++I    C A    + +    A    E +   +PH       + ++Y  L  S   +
Sbjct: 143 RYPDAIFPHFCLAVLYDTHDMFDDAIREYELVLGKDPHYVKAMFNLGSLYAQLGNSNEAI 202

Query: 309 GKLKRALRLEEINKESVESLVI--VSKIALEMGSIDQAHAKAMLAMKIAP 356
             LKRA  L   N +  E +++  + ++ L + +   A      ++   P
Sbjct: 203 MLLKRASEL---NPQ--EVIILNKLGEMYLFISNYSAAEQALKQSIASNP 247


>gi|18379248|ref|NP_563702.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
           thaliana]
 gi|332189539|gb|AEE27660.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 360

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 22/148 (14%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               K +S AI    +        +   +IL   RS  N   G+   +  DA ES++L  
Sbjct: 43  RKGKKHYSEAIDCYTKAISQGVLSDSETSILFSNRSHVNLLLGNYRRALTDAEESMRLSP 102

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
           +++ A   AAK+ +S +   +A+   EK                + ++ +   +K+ L+L
Sbjct: 103 HNVKAVYRAAKASMSLDLLNEAKSYCEK---------------GIENDPSNEDMKKLLKL 147

Query: 318 EEINKESVESL-------VIVSKIALEM 338
               K+  E         V+ +K  L  
Sbjct: 148 VNSKKQEKEQHEAQASQAVVEAKACLSA 175


>gi|153004759|ref|YP_001379084.1| hypothetical protein Anae109_1897 [Anaeromyxobacter sp. Fw109-5]
 gi|152028332|gb|ABS26100.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 268

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 4/167 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L       A       L+       A+  L   + R GDL++A+R   +A+ ++PD  
Sbjct: 52  AYLEAADPERATVAFSHALEFDPDFPEALNGLGIVARREGDLDTARRRFERAVRLAPDFA 111

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM----IA 244
                + +  + A         L    +   +    R  L  A      D  D       
Sbjct: 112 EGHANLGETLLAAGREGGGTDALRAALRIDPDLADARQNLARALLRHGLDSPDRGARWAE 171

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +  + +  L+   +   A    A     + +  +AE    +  ++ P
Sbjct: 172 ARREYLHLLEAAPDRAAAHHDLAFMDYVEGRFERAEAGYRRAAELEP 218


>gi|118372054|ref|XP_001019224.1| hypothetical protein TTHERM_00849220 [Tetrahymena thermophila]
 gi|89300991|gb|EAR98979.1| hypothetical protein TTHERM_00849220 [Tetrahymena thermophila
           SB210]
          Length = 920

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 15/180 (8%)

Query: 186 DAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P   + +   ++     +E  +A   + + +KN        ++L +        K   
Sbjct: 611 NLPESQQILVLSIKYLKKNEEIDQARELVYKARKNNPTHQVYLSLLKLEYQTGALQK--- 667

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTH 301
             ++ ++  ++    N     I +AK   +     +A  + EK  + NP    +   Y  
Sbjct: 668 --AFQESQNAMGAFPNCEKIFILSAKIAYAHKSIEQARQVYEKGLRFNPMSVSLIQKYVE 725

Query: 302 LLSENTVGKLKRAL-RLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           L  E       RA   LE+      ++ E      ++ +E  +   A      A+K  P 
Sbjct: 726 L--EINHKYFARARPVLEKFRVKLPKNPELWCTAVQLEIEAENKKGARYMLARALKECPD 783


>gi|27380929|ref|NP_772458.1| hypothetical protein bll5818 [Bradyrhizobium japonicum USDA 110]
 gi|27354095|dbj|BAC51083.1| bll5818 [Bradyrhizobium japonicum USDA 110]
          Length = 307

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 12/189 (6%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             Y    ++ +AI   +Q       +    A     R +    KG+   +     +++KL
Sbjct: 100 NAYTAKGDYDKAIRDFDQSIALKPTY----AKAFNNRGVAYLRKGEYELAIEAFDDAIKL 155

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLK 312
             + + A +  A + + +N  ++A    ++  ++ P  + A     +T  +       L+
Sbjct: 156 DPDYVAAFVNRAGAYLKKNDHQRAAHDYDEAIRLQPDSQAARSGRCWTRAVLGAWQAALE 215

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIEQ 369
              R  +    S         I L+MG    A A    A++ AP     L    LA+++Q
Sbjct: 216 DCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAIADYNSALRAAPELASALFGRGLAKLKQ 275

Query: 370 AN--SHNTD 376
            +    ++D
Sbjct: 276 GDAIGGDSD 284



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 10/151 (6%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             L + +Y +A E  +  +   P            Y    +  D   A     +A+ + P
Sbjct: 135 AYLRKGEYELAIEAFDDAIKLDPDYVAAFVNRAGAY---LKKNDHQRAAHDYDEAIRLQP 191

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D+            +   W  A+   ++  ++        A +  +R L +   G+  A+
Sbjct: 192 DSQAARSGRCWTRAVLGAWQAALEDCDRALQSGSTS----AAVYDSRGLIHLKMGEFGAA 247

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             D   +L+       A      + + Q   
Sbjct: 248 IADYNSALRAAPELASALFGRGLAKLKQGDA 278


>gi|295883135|gb|ADG56770.1| hdsp protein [Myxococcus fulvus HW-1]
          Length = 2336

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 6/135 (4%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +   +       D+ +   Y +      P                     A+  L     
Sbjct: 758 LEGRFKALIAAPDMAAEHHYPSTDTKEGPGLAETPYERAFYLARTGNIEEALQTLPTATD 817

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +     R        R+   A  G    +  +A+   +   N    +  AA  L  Q + 
Sbjct: 818 DHPWHTRLD------RAELRAVGGQNGQALDEALALAQEFPNRAPIAFLAADMLARQGRF 871

Query: 277 RKAEVILEKIWKVNP 291
            +A  + E+ +K  P
Sbjct: 872 AEALPLAEEAFKQLP 886


>gi|119503632|ref|ZP_01625715.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
 gi|119460694|gb|EAW41786.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
          Length = 746

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 9/134 (6%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK--I 286
           L+  +     +GD+  +     E+L++      A +  A  L +Q +  +A  +L++   
Sbjct: 577 LLQLANYWLARGDIGRAEASLREALRINPQLDPARVNLADVLRAQGRDNEARALLKQGIA 636

Query: 287 WKVNP---HPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             + P   H  +  + +    S   + +L +A  LE           + +    + G   
Sbjct: 637 TSLAPGALHHSLGLLEFREGNSTAAITELAKAAELEAQGSRH---RYVYAIALHDTGQPA 693

Query: 343 QAHAKAMLAMKIAP 356
           QA A      +  P
Sbjct: 694 QAFALLEQLNQDQP 707



 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 8/149 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD+  A+    +AL I+P        +          + A   L Q    +      
Sbjct: 585 LARGDIGRAEASLREALRINPQLDPARVNLADVLRAQGRDNEARALLKQGIATSLAP--- 641

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L  +  L    +G+  A+  +  ++ +L           A +L    +  +A  +LE
Sbjct: 642 -GALHHSLGLLEFREGNSTAAITELAKAAELEAQGSRHRYVYAIALHDTGQPAQAFALLE 700

Query: 285 KIWKVNP-HPEIANI---YTHLLSENTVG 309
           ++ +  P +PE+ +    Y     +    
Sbjct: 701 QLNQDQPGNPEVLSALISYAEGAGDVAKQ 729


>gi|119485107|ref|ZP_01619492.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106]
 gi|119457335|gb|EAW38460.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106]
          Length = 385

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 67/200 (33%), Gaps = 8/200 (4%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y E+ R G+  +A ++   AL + P  P     +    V ++++  A     +      +
Sbjct: 103 YLEALR-GNYQAAAKFYRDALVLDPQNPDFQYGLAYSLVKSEDYRGAADAYRKAISLKPD 161

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                    +  ++    +GD  ++       +    N+  A      +L+ Q+   KA 
Sbjct: 162 LLN----AYLGLAVSLFRQGDYGSAVKTYEMVIASDPNNWQAYASMGMALLRQDNTPKAV 217

Query: 281 VILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
             L +   + P+     I      L S +  G +    +   ++    E    + ++   
Sbjct: 218 ETLRQAATLAPNEASIQIKLGVALLRSGDQAGAIAAFEQAAALSPRDGEIQFQIGEVLKS 277

Query: 338 MGSIDQAHAKAMLAMKIAPR 357
              +D A      A+   P 
Sbjct: 278 QDDLDAAMEAYQRALAFNPD 297



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 20/266 (7%)

Query: 132 AERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
               Y  A +     ++  P   +F  Y L +   +  D   A     KA+ + PD    
Sbjct: 107 LRGNYQAAAKFYRDALVLDPQNPDF-QYGLAYSLVKSEDYRGAADAYRKAISLKPDLLNA 165

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +        ++  A+         A + N  +A   +  +L    + +   +     
Sbjct: 166 YLGLAVSLFRQGDYGSAVKTYE--MVIASDPNNWQAYASMGMAL--LRQDNTPKAVETLR 221

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305
           ++  L  N     I    +L+    +  A    E+   ++P       +I  +      +
Sbjct: 222 QAATLAPNEASIQIKLGVALLRSGDQAGAIAAFEQAAALSPRDGEIQFQIGEVLKS--QD 279

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA----HAKAMLAMKIAPRKEIF 361
           +    ++   R    N + VE+ V + +I L+      A            + A      
Sbjct: 280 DLDAAMEAYQRALAFNPDLVEADVAIGEIQLQKKEYIGAIVSFRRVINRVPQNAN-AHYH 338

Query: 362 LLLAQIEQANSHNTDKILYWTQSALH 387
           L +A   +       + +   + AL 
Sbjct: 339 LGMAI--KGRGGRDSQAIAALEKALK 362



 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 60/201 (29%), Gaps = 11/201 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    G ++ A     +A  + P  P +   +     L   +  A  F     ++A   
Sbjct: 69  RELVDAGKIDEAVLVYVQAAGLDPSDPKIYSGIAYLEALRGNYQAAAKF----YRDALVL 124

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +          +       D   +     +++ L  + + A +  A SL  Q     A  
Sbjct: 125 DPQNPDFQYGLAYSLVKSEDYRGAADAYRKAISLKPDLLNAYLGLAVSLFRQGDYGSAVK 184

Query: 282 ILEKIWKVNPHPEIANIYTH-----LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             E +   +  P     Y       L  +NT   ++   +   +        + +    L
Sbjct: 185 TYEMVIASD--PNNWQAYASMGMALLRQDNTPKAVETLRQAATLAPNEASIQIKLGVALL 242

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
             G    A A    A  ++PR
Sbjct: 243 RSGDQAGAIAAFEQAAALSPR 263


>gi|291566530|dbj|BAI88802.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1687

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 20/228 (8%)

Query: 146  MLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +   P T    +Y+L  ++   +  L  A     KA+ ++P+   +   +       + W
Sbjct: 941  LALDPET--ANIYALLGKALLGMKRLPEAVAAFEKAVQLNPEDATIHTNLGSLAARMQGW 998

Query: 205  SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMA 262
             +AI    +      +                   G    +     ++L L      +  
Sbjct: 999  EQAIKCYERAIALQPDL----VAAHRNLGKVWHKLGKPQQAVSCRYQALILQPEEGEVSE 1054

Query: 263  SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL-----KRALRL 317
             +    SL+   + ++AEV   ++ + +PH   +  Y +L    +   L         R 
Sbjct: 1055 FLAVGNSLLQSGRLQEAEVCYRQVVRRSPHD--SQAYHNLGEVLSAQGLWSEAEAAYRRA 1112

Query: 318  EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             E+  +S ES   + +  +     D A A    A++  PR    LL+A
Sbjct: 1113 VELQPDSFESRNSLGQALVAQEKWDDAIACYGRALEQNPR----LLMA 1156



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 8/143 (5%)

Query: 153  REFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
            RE   Y ++  +   +G+   A R   KA+ + P      + + +  +  + +  AI  L
Sbjct: 1236 REARAYGIWGRALVGLGEYGKALRCYRKAIALEPKNGLWHQELGELCLQQRRYPEAIVSL 1295

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKS 269
             +  K        R++     SL     G    +     E+++           +  A+ 
Sbjct: 1296 QEAVKLKPHPRIYRSLASAWGSL-----GKEAEALDCLFEAIQAKPELASLGECLNLAQG 1350

Query: 270  LISQNKKRKAEVILEKIWKVNPH 292
            L  + +K +A    +     +PH
Sbjct: 1351 LWRRGQKTQAIACYQVAVTTHPH 1373



 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 26/252 (10%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           I   + +   A    +  +   P T      +  +       G+  +A      AL   P
Sbjct: 93  ILQKQGREMEAIAAYQNAIYLEPETPMAYSNLGGILV---GRGEYKTALEILGTALKKWP 149

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
               +   + +  +  ++W RAI    +  +   +     AI+          +G  IA+
Sbjct: 150 QTASLHNNLGRSLLGKQDWDRAIAAFLKAVQLQPDS----AIIQHNLGKALQQQGSHIAA 205

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT----- 300
                + L L           A SL+      +A   L++  K      +   Y      
Sbjct: 206 LDCFQKVLILAPEFPGIHSDLAWSLMELADFPEAIAHLKEAIKGQEF--LLTAYITESEK 263

Query: 301 HLLSENTVGKLKR-ALRLEEINKES--------VESLVIVSKIALEMGSIDQAHAKAMLA 351
             +  +     K  A  L+ +N+           ++   + +   E  +   A       
Sbjct: 264 QAVDGSLGEAQKACAQLLQALNQNDISVSVITLAQTYFHLGQALAEYQNFGSAEQYYQKT 323

Query: 352 MKIAPRKEIFLL 363
           +K+ P      L
Sbjct: 324 LKLQPDFTAAHL 335



 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 83/254 (32%), Gaps = 27/254 (10%)

Query: 133  ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              +   A      +++       A ++L       G  + A+    +A+++ PD+     
Sbjct: 1065 SGRLQEAEVCYRQVVRRSPHDSQAYHNLGEVLSAQGLWSEAEAAYRRAVELQPDSFESRN 1124

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIE 251
            ++ Q  V  ++W  AI    +  +         A+  ++++L +++K      +   ++ 
Sbjct: 1125 SLGQALVAQEKWDDAIACYGRALEQNP--RLLMALENLSKALRHSNKSLPPSQARVLSLI 1182

Query: 252  SLKLCDNSIM-------------ASICAAKSLISQNK--KRKAEVILEKIWKVNPHPEIA 296
            +       +               ++  A  L  Q +      +      W+    P  A
Sbjct: 1183 AGGQIPEELPPPGGGAFAPPDVDVALERATELYQQKRYQACVQQCQQVVQWR----PREA 1238

Query: 297  NIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              Y       +        L+   +   +  ++      + ++ L+     +A      A
Sbjct: 1239 RAYGIWGRALVGLGEYGKALRCYRKAIALEPKNGLWHQELGELCLQQRRYPEAIVSLQEA 1298

Query: 352  MKIAPRKEIFLLLA 365
            +K+ P   I+  LA
Sbjct: 1299 VKLKPHPRIYRSLA 1312



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 63/187 (33%), Gaps = 13/187 (6%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYS-LY 161
           R + +++       +  ++     +    +  +  A +  +  ++  P      ++S L 
Sbjct: 170 RAIAAFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALDCFQKVLILAPE--FPGIHSDLA 227

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-------ITFLNQK 214
           +    + D   A  +  +A+              ++  +      A       +  LNQ 
Sbjct: 228 WSLMELADFPEAIAHLKEAIKGQEFLLTAYITESEKQAVDGSLGEAQKACAQLLQALNQN 287

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +       +    + ++L  A+  +  ++     ++LKL  +   A +     L  Q 
Sbjct: 288 DISVSVITLAQTYFHLGQAL--AEYQNFGSAEQYYQKTLKLQPDFTAAHLAWGDILREQG 345

Query: 275 KKRKAEV 281
           + ++A+ 
Sbjct: 346 RLKEAQK 352


>gi|209519570|ref|ZP_03268362.1| cellulose synthase operon C domain protein [Burkholderia sp. H160]
 gi|209499987|gb|EEA00051.1| cellulose synthase operon C domain protein [Burkholderia sp. H160]
          Length = 1295

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 86/298 (28%), Gaps = 52/298 (17%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA--HEKLEMMLQIPATR 153
           A      AR              + L  + +  IAL +    +A   + L+   Q PA  
Sbjct: 614 AEGRDDEARASLRQAEAVAQNDPQMLATIGQEWIALGDADRGLALVKDWLDAHPQDPAIA 673

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ------------QYVLA 201
               Y     +    D  +     ++AL   P       A               + + +
Sbjct: 674 VRLRYGDLLAAAHRDDDLAVWTARSRAL---PGMTDTQRAQFDDQSLRLALRTVNRQLDS 730

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +   A   L        +     A  L+A++  +   GD  A    A  +L    ++  
Sbjct: 731 GDVHGARRTL----AGVPDAQHTDARWLLAQADVDETAGDFRAGARAAQSALAKQPDNAD 786

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A +  A+      ++ +A  +                                  L +  
Sbjct: 787 ARLTLARMYEHMGRRTEATALTR------------------------------EVLADTP 816

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKI 378
            + V + + +++  +  G  D+A A         P++    L A +I++A     D  
Sbjct: 817 ADDVNTRLAIAQRLVAQGHEDEAAAVIGPLRGEFPQRSDLTLQAGRIDEAQGRFNDAA 874



 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 69/235 (29%), Gaps = 30/235 (12%)

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
           R     P        +   ++G  AL             LAR+      +        L 
Sbjct: 311 RGNAGAPRAPETPEQRARREQG-DAL---------GEQGLARQREGRQDEARALFERALT 360

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
                         + A +    ++       +   +    +   G     +  A +AL 
Sbjct: 361 L-----------DPDNARK-WRSLIATAT--LWGTIAKANTANSQGKPAEGEALAREALR 406

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGD 241
             P       A++   +  ++W  A             + +  R ++ I R+    ++ D
Sbjct: 407 QDPSNVIAQRALIDALIAQQKWPEAEAVARPLATAAKPDIDALRDLVTILRATHRENEID 466

Query: 242 MIAS---YHDAIESLKLCDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNP 291
            + +      A    +     + A++ +  A+  +++     A   LE+  ++ P
Sbjct: 467 PLMASVSPRLASSGSQAQLARMRATVLSLQAQQSMTEKNNSAAIAKLEEAVRLTP 521



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 45/108 (41%), Gaps = 6/108 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+A + +         + H   ++L +      A     +  +  N+ + A   L+++ +
Sbjct: 66  LLASARKWEGMNRPDMARHVIKKALLISPQQPEALAMMGEIELKSNRIKDAAKYLQQLRQ 125

Query: 289 VNP-HP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           + P HP   E+A+ Y  + +    G++ +  +L    + +  S  + +
Sbjct: 126 IAPNHPATQELADAYRLVTTG--KGEIAQIEKLAAAGQHAQASQRLQA 171


>gi|325089701|gb|EGC43011.1| pre-mRNA-splicing factor Clf1 [Ajellomyces capsulatus H88]
          Length = 676

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185
             A    +  + ++P ++  A++  Y    +  GD              +Y  + +  +P
Sbjct: 260 ERARAIYKYALDRLPRSKSIALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQVKENP 318

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239
               +    V+    + +  R      +              R    L I  +L E  + 
Sbjct: 319 KNYDIWFDFVRLEESSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELET 378

Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            DM  +     E +KL            +  A+  I Q   + A   L       P  ++
Sbjct: 379 KDMDRARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQTARKTLGHAIGACPKDKL 438

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              Y  +     E    + K   +  + N  + ++ +  +++   +  ID+A A   L +
Sbjct: 439 FKGYIDIERQLFEFVRCR-KLFEKQIKWNPANCQAWIKFAELERGLDDIDRARAIYELGI 497


>gi|313201762|ref|YP_004040420.1| hypothetical protein MPQ_2031 [Methylovorus sp. MP688]
 gi|312441078|gb|ADQ85184.1| Tetratricopeptide domain protein [Methylovorus sp. MP688]
          Length = 559

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 99/312 (31%), Gaps = 61/312 (19%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL------------LEVQIALAE-----RQ 135
           ++ ++ +  LA +           +   LV               E Q A  E      +
Sbjct: 65  LAKSSRDPRLAERAAKAA---VYGNKPRLVSQAVSLWSELDPSSTEAQQASTELFVNAGK 121

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
            N A   L+ +L    TR      L     +  D N+      +     PD P     + 
Sbjct: 122 LNEAKPFLQKLLAKEDTRANGFLYLNSLLAKQTDKNAVLTLVQELAAPYPDLPEAHFTIA 181

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              + A +   A++ L+  +K +  W    + LL  + L        I  Y   + + + 
Sbjct: 182 NSALAAGKVELAMSELDTAEKLSPGWE--MSALLKGQILYLQSPDAAINFYKQFLSANEN 239

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            +      +  A+ LI+Q +                       +     E         +
Sbjct: 240 ANEVR---LTMARLLINQKR-----------------------FDEAKPE--------FI 265

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK---IAPRKEIFLLLAQIEQANS 372
           +L   +K + E +V+V  ++++   +  A      A+      P + +F+ L QI +   
Sbjct: 266 KLISASKNNPEIMVVVGLLSIQANELGDAEKYFQDALAAGFKNPDQ-VFIYLGQIAEKQ- 323

Query: 373 HNTDKILYWTQS 384
           ++    L W   
Sbjct: 324 NDDKLALAWYNR 335


>gi|283786161|ref|YP_003366026.1| TPR-domain protein [Citrobacter rodentium ICC168]
 gi|282949615|emb|CBG89234.1| putative TPR-domain protein [Citrobacter rodentium ICC168]
          Length = 1084

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 92/328 (28%), Gaps = 43/328 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYV--SQQHTFHNE---YLVYLLEVQIALAERQYNIAHEKLEM 145
           G +++   +  LA +              N        LL       +  Y+ A E    
Sbjct: 497 GTLALNRADWTLAERCARAALERAHRLNKNPRDGEASMLLAA-ALERQGNYDDAREHYYK 555

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
                  R+ A +SL   + R  +   A    T++L  +                    S
Sbjct: 556 ASWSGNCRDAAFWSLARIAMRRENYADALEKVTQSLRFNASNNLAMGMRALALAKLGRAS 615

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+ +  Q+ K+               +     + +   +   AI   +       A   
Sbjct: 616 EALNYAEQQLKDYPLSYVLH------YARWAIGRDEAAKAALIAITGRRG----TNACEL 665

Query: 266 AAKSLI--SQNKKRKAEVILEKI------WKV----NPHP--EIANIYT--HLLSENTVG 309
           A   L    Q   R+A  +L+        W+     NP P  + A       +   NT+ 
Sbjct: 666 AGWLLSCGQQEAAREALELLDSQETLPLLWRASLSDNPQPLIDQARACLRNRVRFPNTLD 725

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA----KAMLAMKIAPRKEIFLLLA 365
           +++    L     +S  +  ++          D+A A            AP   +  + A
Sbjct: 726 EVQMLQTL----PQSAYAQYLLGCFWYSKRRYDEALACWQFTLRQEASFAPVHRLLGIYA 781

Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPL 393
                   +  +   +   A+   P+  
Sbjct: 782 ---WNKHQDAGQARRYLAQAVALEPENA 806


>gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
 gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
          Length = 91

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 28/66 (42%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               +  Y+ A E  +  L++      A Y+L     + GD + A  Y  KAL++ P+  
Sbjct: 18  AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77

Query: 189 WVTEAV 194
              + +
Sbjct: 78  EAKQNL 83



 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           + GD + A  Y  KAL++ P+       +   Y    ++  AI +  +  
Sbjct: 21  KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70


>gi|88807129|ref|ZP_01122641.1| hypothetical protein WH7805_11298 [Synechococcus sp. WH 7805]
 gi|88788343|gb|EAR19498.1| hypothetical protein WH7805_11298 [Synechococcus sp. WH 7805]
          Length = 402

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 13/146 (8%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQ 273
             +   R   +L +  +L   D     + Y  A++    ++L      A +  A  L+  
Sbjct: 234 AGRTAERYELLLNLGIALAPEDADAAESYYRQALDLALDVRLSLG---ARLNLAALLMQA 290

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESL 328
           N+  +A  +     +    PE+A  + +L        +    L+   R  E+N +  ES 
Sbjct: 291 NQLDEAIQLTTTACQRA--PEVALAWYNLGLMERRRGDLAASLRAYERSLELNPDHAESH 348

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKI 354
              +   L  G ID A A    A+  
Sbjct: 349 QNFAVARLMGGDIDGARASFRAAIDK 374



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 1/157 (0%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQY 136
                + Y+ L    +++A  +   A   +             L   L    + +   Q 
Sbjct: 234 AGRTAERYELLLNLGIALAPEDADAAESYYRQALDLALDVRLSLGARLNLAALLMQANQL 293

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A +      Q       A Y+L     R GDL ++ R   ++L+++PD     +    
Sbjct: 294 DEAIQLTTTACQRAPEVALAWYNLGLMERRRGDLAASLRAYERSLELNPDHAESHQNFAV 353

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             ++  +   A           ++ NR +    +   
Sbjct: 354 ARLMGGDIDGARASFRAAIDKLRQQNRAKEAGALQAQ 390


>gi|325206293|gb|ADZ01746.1| tetratricopeptide repeat protein [Neisseria meningitidis
           M04-240196]
          Length = 612

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 51/309 (16%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            P      +       VL +  ++ +  L +    A E    R  LL+A++    D    
Sbjct: 129 EPIPGEAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLLAQAAVQQDGLAQ 188

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------------- 288
            AS      +LK     +  +  A      Q +++ KA   L+++ K             
Sbjct: 189 KASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILPPTLMTL 246

Query: 289 ---VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEINKESVE 326
                 +PEI + +                 +++  ++ +L     R   L E N  +  
Sbjct: 247 RLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLERNPNAD- 305

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHNTDKILY 380
              +  + A+   +  +  +      + A       ++    L A +  A+  +  K+  
Sbjct: 306 ---LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRSRAALTAAMMYADRRDYAKVRQ 362

Query: 381 WTQSALHAM 389
           W +  + A 
Sbjct: 363 WLKK-VSAP 370


>gi|323524675|ref|YP_004226828.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323381677|gb|ADX53768.1| Tetratricopeptide repeat [Burkholderia sp. CCGE1001]
          Length = 613

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 103/328 (31%), Gaps = 54/328 (16%)

Query: 110 VSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYF 162
             +Q    N  L       +L  ++AL   Q   A++    + +       A  +  +  
Sbjct: 69  AEEQKALPNVQLTSQIVFQVLAAEVALQRNQPAPAYQTYLALARDTHDPRMAQRATEIAL 128

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            +    D  +A +        +P +    +      VL+ +   A   L ++       N
Sbjct: 129 AAQSPSDALAAAQLWQ---QYAPSSERAAQLDASLLVLSGKPDDAEPLLARELAKVPADN 185

Query: 223 RNRAILLI--------------------------------ARSLENADKGDMIASYHDAI 250
           R  AIL +                                A + +     D   +     
Sbjct: 186 RGNAILALQLLLSRGPNRIGGLHVLQDMLKNDMNRPEAQLAVARQQLVADDAPGARKSLE 245

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENT 307
           ++L L  + + A++  ++      ++++    LEK  + NP  H   +A    +L S+  
Sbjct: 246 QALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRL 303

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---EIF 361
               K+   + + N   +  L+ ++ I ++  + + A           +  P     + +
Sbjct: 304 DDAQKQFEIMHKANANDLTPLMALALIKIQQKNFNDAQTYLTQYAQQAEKTPGADPGQAY 363

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAM 389
           + LAQ+      N      W      A 
Sbjct: 364 IYLAQL-SLEQKNDAAAADWLDKISPAS 390


>gi|262275587|ref|ZP_06053396.1| putative lipoprotein [Grimontia hollisae CIP 101886]
 gi|262219395|gb|EEY70711.1| putative lipoprotein [Grimontia hollisae CIP 101886]
          Length = 481

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 79/244 (32%), Gaps = 16/244 (6%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-QYNIAHEKLEMMLQ 148
            G +++ A +  L++          T   E  +  L       +      A    + M++
Sbjct: 84  KGRLALLAGDTALSKTSFERADIAATKQQEAAIIQLS------QGVDQLGALITNDNMIR 137

Query: 149 -IPATREFAVYSLYFES--CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
             P   E     LY      +  D+  A     +A  +   A  + +  ++      + +
Sbjct: 138 YTPPDYELGFLHLYLTLGYLQNNDVQGALVEVRRANLVQERARKIRQDELESASRTAQQN 197

Query: 206 RAITFLNQKKKNAKEWN-----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
                L        +            L    +L    +G++ +++ D   ++ +  ++ 
Sbjct: 198 GINENLGAVLSRYPDAGQTLGFVQNGYLFYLSALLYEAEGNLNSAFIDYSRAMAVEPDNK 257

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
             +  A +    Q + R    +LEK +     P+ +     +LSE  V   +   RL   
Sbjct: 258 YIAEAAMRIAFRQGR-RDELRLLEKQYGKYQRPDRSKGQLVILSEQGVVNARDFWRLPLW 316

Query: 321 NKES 324
             +S
Sbjct: 317 LPDS 320


>gi|330917372|ref|XP_003297789.1| hypothetical protein PTT_08308 [Pyrenophora teres f. teres 0-1]
 gi|311329345|gb|EFQ94118.1| hypothetical protein PTT_08308 [Pyrenophora teres f. teres 0-1]
          Length = 1142

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 18/178 (10%)

Query: 130 ALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             A R +  A    E +L+     T       L  E  +      A  +  KAL   P  
Sbjct: 152 YQAPRNHAEAKAIFESILKRKPQFTAALIGIGLVLEEEQE--YGQAFEFLEKALQQDPSN 209

Query: 188 PWVTEAVVQQYVLAKEWSRAIT---------FLNQKKKNAKEWNRNR----AILLIARSL 234
             +         LA ++   +           L+  K+  +E          + L     
Sbjct: 210 GRIGAESAWCQALAGDYKTGLERLQGYLDYPELDASKQRGRELRAQTLYRIGVCLWELDP 269

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP 291
             A + D   +Y   + ++K+  N   A           N+ RK A    +K ++++P
Sbjct: 270 SKAARKDRQRTYAKLLAAIKVNPNYAPAYTLLGIFYEDYNRDRKRARQCFQKAFELSP 327



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 79/223 (35%), Gaps = 32/223 (14%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN 212
           +  +++E     D   A++   KA ++SP      E + + +    EW      +   ++
Sbjct: 300 LLGIFYEDYNR-DRKRARQCFQKAFELSPSEVVAAERLARLFANQGEWDIVEVVSQRVVD 358

Query: 213 QKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             K      ++ + +     +L     +K +   S    + +L++  +   + +   +S 
Sbjct: 359 SGKARQTPGSKRKGVSWPFSALGVVQMNKQEYQKSIVSFLSALRISPDDYYSYVGLGESY 418

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            +  +   A                   + +  +      LKR       ++E   +  +
Sbjct: 419 HNSGRYNSASR----------------AFNYAENPTDGVVLKR------TDEERWFTKYM 456

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370
           ++ +  E+   D+A +     +   P++    I LL   +E+A
Sbjct: 457 LANVNRELSEYDEAISGYEAVLADRPKEFGVSIALLQTLVEKA 499


>gi|113478135|ref|YP_724196.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110169183|gb|ABG53723.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 887

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 89/246 (36%), Gaps = 27/246 (10%)

Query: 126 EVQIALAERQYNIAHEK-LEMM---LQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKA 180
           + +I LA+ +   A     + +      P T +            R+G+++ A+ +  KA
Sbjct: 13  KAEIYLAQGKLEAAITACYQALEIEQNFPLTCKILG-----NILQRMGEIDKAKEWYIKA 67

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADK 239
           +   P+       +   Y   K+W  AI    +            R +  I + L+  + 
Sbjct: 68  ISQQPNLAEAHANLGSIYAQQKQWHLAIECYREAIGIKPNIPGFYRNLGKIWQELDKVEL 127

Query: 240 GDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                    ++E+          +   +   K L+   ++ +A    +K   +N +P + 
Sbjct: 128 ARDCQEQALSLEAHY------PQASKYLKQGKKLLENGEREEAIAYFQKA--INFNPSLV 179

Query: 297 NIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           + Y       L +++    +    +  E+  +       + K+  E+G +D A  +  LA
Sbjct: 180 DAYQNLGDISLKTKDFNEAINYYQKAIELKPDLWIVHYKLGKLFQEIGELDTATIEFNLA 239

Query: 352 MKIAPR 357
           +++ P 
Sbjct: 240 IELNPS 245



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 78/213 (36%), Gaps = 33/213 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +++N A       ++I     ++ Y+L     ++ + + A      A++ +P++PW  + 
Sbjct: 431 KRWNQAIVAYRQAIKIKPDSYWSHYNLGEIFLKLQEWDKAVETYRYAIENNPNSPWYYQY 490

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +   AI    +  +   +W+R  ++L         + GD   +    I+++
Sbjct: 491 LGIVLRKQGKIQEAIACYRKAIEIKPDWHRFYSLL----GDILLEIGDSEEAISCYIKAI 546

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKL 311
           KL  N    +  A + L       +   I +   ++ PH   E+   Y   +        
Sbjct: 547 KLQPN----ATAAYRQL-------RGIYIFKLA-QLRPHQLNELVKCYQEAI-------- 586

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                  ++     E  + ++ I    G +D A
Sbjct: 587 -------KLQPNFPEVYINLADILTGKGELDTA 612


>gi|218663223|ref|ZP_03519153.1| adenylyl cyclase class-3/4/guanylyl cyclase [Rhizobium etli IE4771]
          Length = 402

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 63/218 (28%), Gaps = 40/218 (18%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIG-----------------------------D 169
           A E+ +  ++ P     A   LY ++  +                              D
Sbjct: 146 ARERFKHDIKDPDG-LLAARGLYQQALELDPSYAAARAGLGMTYILDMTQRVTGRATERD 204

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
                  A +++ + P      + V        ++  A+    Q  + + E N N    L
Sbjct: 205 AEIGLSEARQSIRLDPTLAIGYQVVSFGLSATGDYLGAL----QAARRSVELNPNDPDSL 260

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEKIW 287
           +A +      GD   +   A ++ +L         +    ++L +  ++ +A  ++ +  
Sbjct: 261 MAVAKAQVRYGDYADAVASAEQARRLHP-MAPEYYAYVHGQALYAAGRRDEAANVIRECL 319

Query: 288 KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINK 322
              P      +         E+          L + N 
Sbjct: 320 IRAPQDANCLLIQTALQAAREDLGDAQASMTSLIKANP 357



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 4/189 (2%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                   + +A+                  + +  R    A + D      +A +S++L
Sbjct: 159 GLLAARGLYQQALELDPSYAAARAGLGMTYILDMTQRVTGRATERDAEIGLSEARQSIRL 218

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE--IANIYTHLLSENTVGKLK 312
                +     +  L +      A     +  ++NP+ P+  +A     +   +    + 
Sbjct: 219 DPTLAIGYQVVSFGLSATGDYLGALQAARRSVELNPNDPDSLMAVAKAQVRYGDYADAVA 278

Query: 313 RALRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
            A +   ++  + E    V  +     G  D+A       +  AP+    LL+    QA 
Sbjct: 279 SAEQARRLHPMAPEYYAYVHGQALYAAGRRDEAANVIRECLIRAPQDANCLLIQTALQAA 338

Query: 372 SHNTDKILY 380
             +      
Sbjct: 339 REDLGDAQA 347


>gi|149417764|ref|XP_001521187.1| PREDICTED: similar to tetratricopeptide repeat protein, partial
           [Ornithorhynchus anatinus]
          Length = 547

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 16/173 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ AT      V  L         +  A ++  +A
Sbjct: 232 KILKAECLALLGRYPEAQSVASDILRVDATNADALYVRGLCL--YSEDCIEKAVQFFVQA 289

Query: 181 LDISPDAPWVTEAVVQQYVLA------------KEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A      L              ++ +A     +         +  A L
Sbjct: 290 LRMAPDHEKACVACRNAKALKAKKDDGNRAFKDGDYKQAHELYTEALAIDPNNIKTNAKL 349

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              R+  NA    +  +  D   +++L D+ I A +  A+  +   +  +A  
Sbjct: 350 YCNRATVNAKLRKLEDAIEDCTSAVRLDDSYIKAYLRRAQCYMDTEQFEEAVR 402


>gi|300822073|ref|ZP_07102216.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7]
 gi|300525436|gb|EFK46505.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7]
          Length = 803

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ +    AV  L                      +   I D+  + +    A +A 
Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
            +          +      +A  +    +           +L  + +   +  A  L   
Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
            K+ +AE +L    +  P P    ++    +     + T  +      L      + +++
Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           + ++++ +  G    A ++                   + QA   +T     
Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692



 Score = 43.8 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L    T   A+  L
Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738


>gi|149377483|ref|ZP_01895225.1| CheY-like receiver protein [Marinobacter algicola DG893]
 gi|149358250|gb|EDM46730.1| CheY-like receiver protein [Marinobacter algicola DG893]
          Length = 546

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 88/281 (31%), Gaps = 31/281 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKL------EMMLQI 149
                 + +   +  +       L  ++  + +  +         +          ML+ 
Sbjct: 71  GEGKNGQHILEELRHKKLLKRSSLFLMVTAETSKEMVMGAREYQPDGYLTKPINRAMLEK 130

Query: 150 PATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDA-PWVTEAVVQQYVLAKEWS 205
                 A  +      R  D      A     + L   P    W+ + +   Y    ++S
Sbjct: 131 RLGGLIAQRNALLPINREIDRENFPEAISLCLQTLPSQPRYKTWLMKTLADLYYQVGDFS 190

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+   +          R+ +   + R        +   +     E +    + + A   
Sbjct: 191 HALKIHDDVLS-----QRDLSWARLGRGKILIANQNYDDAAATLKELVSQHPDYMEAYDL 245

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEI 320
            A++L  Q +  +A+ ILEK  + +P     H  +A + +   +++     K   +   +
Sbjct: 246 LAEALEKQGRPTQAQQILEKAAEHSPNALLRHKHLATLASS--NQDMPTASKAWRQTVSL 303

Query: 321 NK----ESVESLVIVSKIALEMGSID---QAHAKAMLAMKI 354
                 ++ E  + + +   ++   D   +A A A  A+ I
Sbjct: 304 GTYSIHDNSEHYLALGQSLSDLSEGDSSSEAAAHADEALTI 344


>gi|116623643|ref|YP_825799.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226805|gb|ABJ85514.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 548

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 95/319 (29%), Gaps = 43/319 (13%)

Query: 82  DKGYKA---LYTGLMSIAA---HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
            + ++A       ++ +     H+      +         F N       +        +
Sbjct: 121 RRAFEADASRSDAMLGLGIALIHDGHPGDALMPLEKYLSLFPNHEQALFGQAVALQQTGR 180

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           +  + E+   +L      E A+ +L        D  S +RYA    ++ PD+P  TEA+ 
Sbjct: 181 HAESVEQYRKVLSRNPKCEEALSNLVAMFIEKKDHESVRRYAEMLCELQPDSPVATEALA 240

Query: 196 QQYVLAKEWSRA--------------------ITFLNQKKKN---AKEWNRNRAILLIAR 232
                  ++  A                    +   + K  N   A +  R  A L  + 
Sbjct: 241 TLAFQDGDYLSAARHCRTLCESAPDRFENWFNLGVAHHKMGNYDKAAQAYRQAASLQPSS 300

Query: 233 SLENADKG-------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +  + + G       D+  +      +L +  N        A  L  Q +++ AE +  +
Sbjct: 301 AQSHLNLGVAQQELNDLAGARASYEHALNIDPNQSGVLWNLALVLEQQGERQWAEKLYAR 360

Query: 286 IWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           I      PE  +      Y  LL  + +   +          +  E+ +         G+
Sbjct: 361 I--NEDAPEWGDACFRLGYLRLLRGDYINSAEAFEACLAHRLDWPEAHLNAGIAYARNGN 418

Query: 341 IDQAHAKAMLAMKIAPRKE 359
              A       + + P   
Sbjct: 419 APAARKSFQEVLTLRPDSS 437



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 26/243 (10%), Positives = 75/243 (30%), Gaps = 8/243 (3%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           + ++ +  +    +      L   +A  +  Y  A      + +    R    ++L    
Sbjct: 219 RRYAEMLCELQPDSPVATEAL-ATLAFQDGDYLSAARHCRTLCESAPDRFENWFNLGVAH 277

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            ++G+ + A +   +A  + P +      +        + + A         +A   + N
Sbjct: 278 HKMGNYDKAAQAYRQAASLQPSSAQSHLNLGVAQQELNDLAGARASYE----HALNIDPN 333

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           ++ +L   +L    +G+   +        +       A        + +     +    E
Sbjct: 334 QSGVLWNLALVLEQQGERQWAEKLYARINEDAPEWGDACFRLGYLRLLRGDYINSAEAFE 393

Query: 285 KIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
                    P   +     +  + N     K    +  +  +S +++  ++ +ALE    
Sbjct: 394 ACLAHRLDWPEAHLNAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVRGLAALALEQEEF 453

Query: 342 DQA 344
            +A
Sbjct: 454 TEA 456


>gi|116624132|ref|YP_826288.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227294|gb|ABJ86003.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 427

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 57/200 (28%), Gaps = 8/200 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             + D   A     K + + PD      A      +A + + AI  + +   +      N
Sbjct: 144 MELSDYGGAADAYQKMVQLRPDLASYNRAAY-YRFVAGDANGAIEVMKRAIDSGSRSAEN 202

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A  L+         G    +      +L+L      A     K    + K+ +A     
Sbjct: 203 IAWCLVDLGNMELKTGRAAEAGEAFGAALRLFPGYYPALAGMGKLKAQEGKRAEAIGYYV 262

Query: 285 KIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K     P P+ A             E    +  R   +E +  +          +AL   
Sbjct: 263 KAQAAVPLPDYAAALEDLYEAEGKPEEARKQAARLAVIERM--DQAAGFTANRNLALAYA 320

Query: 340 SIDQAHAKAMLAMKIAPRKE 359
             ++    A+  ++   +  
Sbjct: 321 DHERNAEHALAMIREEMKTR 340


>gi|312131657|ref|YP_003998997.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311908203|gb|ADQ18644.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 516

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 69/211 (32%), Gaps = 35/211 (16%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLI---- 230
            K +++ PD        ++    +  +++A+  +   +K      R    + I+L+    
Sbjct: 113 EKWIELRPDDEEPYLEWLEYQSASGNYAQALKIIGLAEKKWGSSERIIKAKQIILMKDNK 172

Query: 231 --ARSLENADKGDMIASYHDA---------IESLK-----LCDNSIMASICAAKSLISQN 274
             A   E +   D   +   A          E++K     L  +   + I        + 
Sbjct: 173 VEAALQEGSKVQDPAFALDQAKLLIQNQKTKEAIKTLSGSLSASLPESYILLGDLYSKEG 232

Query: 275 KKRKAEVILEKI-------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
           +K + E +LEK        +    H  +  I      E      K A +L +   E   +
Sbjct: 233 RKEEVEGLLEKALTETGLSYDAKVH--LTRIVAQWSGEKAG---KAAEQLIKETPEQGRA 287

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            +I      + G + +A      A++    +
Sbjct: 288 YLIAGDYNYKSGDLPKARDYYEKAVQKDKSQ 318



 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 17/183 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + GDL  A+ Y  KA+        V +A+++      +W       +Q         +  
Sbjct: 297 KSGDLPKARDYYEKAVQKDKSQFEVWKALLETNFGLGDWQALEKSADQASIYFPSQGQVW 356

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L +A+ +   D             SLK           AA   +   +K+K       
Sbjct: 357 LYLGLAQIMLGEDASMSFEEAQQWDSSLKE----------AASIGLQWAEKKK------V 400

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           +W   P  +  + + +L +  T  ++  A  L      +    V++++  ++   +++A 
Sbjct: 401 VWSKVPS-DPFSQFLYLKTGGTENRVAIAGTLSANYPSAPLFKVLLAESLMDSNKLEEAE 459

Query: 346 AKA 348
              
Sbjct: 460 KTL 462


>gi|262305041|gb|ACY45113.1| acetylglucosaminyl-transferase [Stenochrus portoricensis]
          Length = 290

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GLVQEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ ISP        +        +   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 15/168 (8%)

Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A +    AL + P        +            A     +  +   E+    A   
Sbjct: 36  VQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAH 91

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +     +G +  +     E++++      A      +L      + A     +  ++
Sbjct: 92  SNLASVLQQQGKLNEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQI 151

Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           NP     H  +A+I  H  S N    +       ++  +  ++   ++
Sbjct: 152 NPAFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 197


>gi|262304977|gb|ACY45081.1| acetylglucosaminyl-transferase [Dinothrombium pandorae]
          Length = 287

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A   ++   +    H + L  L    I   +     A       L +      A 
Sbjct: 34  GHVNEAEDCYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L  A  +  +A+ ISP        +        +   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLTEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL      A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDAYCNLAHCL 200



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 47/158 (29%), Gaps = 11/158 (6%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL + P        +            A     +      E+    A      +     +
Sbjct: 46  ALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALDVFPEF----AAAHSNLASVLQQQ 101

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
           G +  +     E++++      A      +L      + A     +  ++NP     H  
Sbjct: 102 GKLTEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSN 161

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A+I  H  S N    ++      ++  E  ++   ++
Sbjct: 162 LASI--HKDSGNIPEAIQSYKTALKLKPEFPDAYCNLA 197


>gi|218780752|ref|YP_002432070.1| hypothetical protein Dalk_2912 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762136|gb|ACL04602.1| Tetratricopeptide domain protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 622

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 55/181 (30%), Gaps = 19/181 (10%)

Query: 130 ALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESC--RIGDLNSAQRYATKALDIS 184
           A    ++  A E+    L+          A+  LY  +    + D   + + A K L   
Sbjct: 384 AYRNDKFARAEEEFNAALEVLPDYPKALAALTYLYANAKDSAVKDPKKSLKIAEKVLKFR 443

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSL-ENADKGDM 242
           P  P+V +A    Y    +   A+   +    K +             R+L         
Sbjct: 444 PCYPYVWDAASAAYYENGDLDNALECQDNAYGKYSSPPKSYIEKTAEYRALRAQFQDAKT 503

Query: 243 IASYHDAIESLKL-------CDNSIMASICAAKSLISQNKKR-----KAEVILEKIWKVN 290
           +      +E++K+           + A    A+ L +    +      A    E  + + 
Sbjct: 504 LYRQERYVEAIKILQETLEKMPQYVDALDLFARILSTAKDPKFISPAMAIKYAEVAYALA 563

Query: 291 P 291
           P
Sbjct: 564 P 564


>gi|300313205|ref|YP_003777297.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
 gi|300075990|gb|ADJ65389.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
          Length = 600

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 79/242 (32%), Gaps = 17/242 (7%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  +L  +IA    Q+  A   + M+     TR+         + R  ++    R  ++A
Sbjct: 70  LYKVLTAEIAFQRGQWQPA--YVTMLAAAQQTRDP------RLAKRAAEMAVTARQPSEA 121

Query: 181 L-------DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           L       +++P +    +  +   +L+         L Q+  +A    R   +L I R 
Sbjct: 122 LVAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRL 181

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L  A       +    I       + +   +  A+   S      A+       K+ P  
Sbjct: 182 LVRAKDKQASFAILQKISQPYG--DLMETHLALAQGAFSVGDTTYAQREARAAMKIKPDS 239

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           E+A +    ++ +     K          ++ E  V  ++  +E      A  +    +K
Sbjct: 240 ELAVLTAAQVAPDNKEATKLVTEFLRKYPDAREVRVAYARTLVEQKDYKDARTQFEALLK 299

Query: 354 IA 355
             
Sbjct: 300 ED 301


>gi|296109098|ref|YP_003616047.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus infernus
           ME]
 gi|295433912|gb|ADG13083.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus infernus
           ME]
          Length = 317

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 12/188 (6%)

Query: 113 QHTFHNEYLVYLLEVQIALAER--QYNIAHEKLEMMLQ-IPATREFA-VYSLYFESCRIG 168
           +        + LL  +        +Y  A   +E  L+  P  R    +        R+G
Sbjct: 135 RLLIKYPDSLLLLTKKAYALRGLGRYEEALSVIEKGLELDPDNRVLLYMKGSLL--RRLG 192

Query: 169 DLNSAQRYATKAL-DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           + + A     K + +++       + +V   ++  ++  A+ +     K   E   +   
Sbjct: 193 NYHKAYETFKKLIDELNVRWLDAIKHLVSLCLVLGKFDEAVKY----AKMGLEIRDDDTT 248

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L         + G+   +       + L  +++ A +  A+    + +  KA    EK  
Sbjct: 249 LWYYLGQAYEELGEENKAIEAYNRCVALYPDNVRALLNLARLYEERGEMEKAVNHYEKAM 308

Query: 288 KVNPHPEI 295
               H +I
Sbjct: 309 AKR-HKDI 315


>gi|189200925|ref|XP_001936799.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983898|gb|EDU49386.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1142

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 14/176 (7%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
             A R +  A    E +L+       A+  +        +   A  +  KAL   P    
Sbjct: 152 YQAPRNHAEAKAIFESILKRKPQFTAALIGIGLVLEEEQEYGQAFEFLEKALQQDPSNGR 211

Query: 190 VTEAVVQQYVLAKEWSRAIT---------FLNQKKKNAKEWNRNR----AILLIARSLEN 236
           +         LA ++   +           L+  K+  +E          + L       
Sbjct: 212 IGAESAWCQALAGDYKTGLERLQGYLEYPELDASKQRGRELRAQTLYRIGVCLWELDPSK 271

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP 291
           A + D   +Y   + ++K   N   A           NK RK A    +K ++++P
Sbjct: 272 AARKDRQRTYAKLLAAIKANPNYAPAYTLLGIFYEDYNKDRKRARQCFQKAFELSP 327



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 32/223 (14%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN 212
           +  +++E     D   A++   KA ++SP      E + + +    EW      +   ++
Sbjct: 300 LLGIFYEDYN-KDRKRARQCFQKAFELSPSEVVAAERLARLFANQGEWDIVEVVSQRVVD 358

Query: 213 QKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             K      ++ + +     +L     +K +   S    + +L++  +   + +   +S 
Sbjct: 359 SGKARQTPGSKRKGVSWPFSALGVVQMNKQEYQKSIVSFLSALRISPDDYYSYVGLGESY 418

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            +  +   A                   + +  +      LKR       ++E   +  +
Sbjct: 419 HNSGRYNSASR----------------AFNYAENPTDGVVLKR------TDEERWFTKYM 456

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370
           ++ +  E+   D A +     +   P++    I LL   +E+A
Sbjct: 457 LANVNRELSEYDDAISGYEAVLADRPKEFGVSIALLQTLVEKA 499


>gi|170721170|ref|YP_001748858.1| TPR repeat-containing protein [Pseudomonas putida W619]
 gi|169759173|gb|ACA72489.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas putida W619]
          Length = 764

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 83/317 (26%), Gaps = 58/317 (18%)

Query: 100 IPLARKMHSYVSQQHTFHN---EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
              A    +   +   F       L   LE   AL       A     ++   PA R   
Sbjct: 467 GKPAIVRATAADRLADFGGAALPSLSKALEDHSALV---RAYAVSGFTVLT--PAQRVVH 521

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L  +  R     + +  A   L   P       A  +           +    Q+  
Sbjct: 522 LLPLLNDPLRAVRDEAIRALADIPLAALPS---ARRAGFRAQ---------LQEYEQRLH 569

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +   NR    +  ++    +G  + +     ++L++      A +  A         
Sbjct: 570 ANADLPGNR----LNLAVFLERRGRELEAMEQYRQALRMDPYFSPARVNLAALASRTLHM 625

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSK 333
            +AE +L K                L       +   A  L  +     +  ++ V +++
Sbjct: 626 DEAERVLRKG-------------ISLQDIPKADRANLAYMLALLLVERGQPEDAAVYMAE 672

Query: 334 IALEM-----------------GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNT 375
            A                       + A       +  AP     L  L  +   +    
Sbjct: 673 AAEAAPQNTRIRYNQGLLLLQLRQSEAARKALEAGLSQAPADSDLLYALIYLHSVSGGRE 732

Query: 376 DKILYWTQSALHAMPDP 392
             + YW Q  L +  DP
Sbjct: 733 QAVRYWRQLRLVSPNDP 749


>gi|147920898|ref|YP_685295.1| O-linked GlcNAc transferase [uncultured methanogenic archaeon RC-I]
 gi|110620691|emb|CAJ35969.1| predicted O-linked GlcNAc transferase [uncultured methanogenic
           archaeon RC-I]
          Length = 368

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 11/205 (5%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y        +G+   A     K++++ P    + +          ++ RAI   ++  + 
Sbjct: 123 YGRARALAALGETQEAIACLEKSIELEPFNADMWQYRGACECSMGDFDRAIRSFDRAIEI 182

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +  +        ++   A  GDM  S      +  +  +   A +   + ++   K  
Sbjct: 183 NPDHGK----AWCGKAEVLASMGDMTGSLRCYDRASAVAPSLPDAWLGKGRLMLLSEKYE 238

Query: 278 KAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A     K  ++   P++++      +   + E     ++   +  E+N  +  +  +  
Sbjct: 239 EAAGAFRKAAEIA--PDLSDAWLYQGWAQEMQERAEEAIEAYSKAIELNPGNHMAWYMKG 296

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
            +   M   D A      A++I P 
Sbjct: 297 VLLGRMEKYDAAVECFDAAIEIYPD 321


>gi|77163723|ref|YP_342248.1| hypothetical protein Noc_0185 [Nitrosococcus oceani ATCC 19707]
 gi|254436150|ref|ZP_05049657.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani
           AFC27]
 gi|76882037|gb|ABA56718.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
 gi|207089261|gb|EDZ66533.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani
           AFC27]
          Length = 387

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 93/292 (31%), Gaps = 59/292 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI-------ALAERQYNIAHEKLEMMLQIP 150
             +  A ++H            YL      Q         +     + A      +L+  
Sbjct: 83  GEVDRAIRVHQN-----LIERPYLSSSQRGQALLELGLDYMRAGMLDRAESSFLEVLKRR 137

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS--RAI 208
           +     +  L     +  + + A   A K  + S +A     A     +  + W+  +A+
Sbjct: 138 SHIGITLRQLLDLYQQEKNWHQAIAMAQKLHEESGEATESMIAHFYCELAEQHWAQKKAV 197

Query: 209 TFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
                 K+  A +W   RA LL  +S    +KGD   +     +  +   + +       
Sbjct: 198 ETTRFIKQALASDWRCVRATLL--QSSLAMEKGDYKRAIRCLRQVERQDPDYLP------ 249

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE- 326
                         IL+          ++  Y +L  ++     K    L E +K     
Sbjct: 250 -------------EILKP---------LSECYQYLEGQD-----KFFFWLTEASKRHPGC 282

Query: 327 SLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-----QIEQA 370
           + +++++ A   + G   +A    +  +++ P  E    LLA      IE A
Sbjct: 283 TSLVLARAAYLQQRGEQKEARYFLIEQLRVYPSVEALQQLLALGVPEDIEAA 334


>gi|325139975|gb|EGC62504.1| tetratricopeptide repeat protein [Neisseria meningitidis CU385]
          Length = 616

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 74  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 133 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 186

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 187 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 244

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 245 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 304

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 305 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 360

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 361 YAKVRQWLKK-VSAP 374


>gi|116329905|ref|YP_799623.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 1197

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 5/179 (2%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +Y G   +   +I  A+  +    +      E  VY    ++         + E  +  L
Sbjct: 419 IYEGDKHLRQGDIKGAKVFYEKAKK--ASSEEPSVYNAFGRLYFISGDPKSSEENFKKAL 476

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            I      A+  L        + N   +Y  +  +++ + P     + + Y   KE+ +A
Sbjct: 477 SINKQNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536

Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
                 L +K  N +  N   A+L    SLE  +K +  ++ +   ++ KL  +    +
Sbjct: 537 ENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNWISKAEKLTKDIPEIA 595



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 83/244 (34%), Gaps = 23/244 (9%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  ++   G+   A  Y TKA ++          +V   +    +  A        K+ 
Sbjct: 347 GLNMKAL--GEPAKALVYFTKARELDSAFAEPVTNLVFLLIAENRYKAARKEAES-LKSE 403

Query: 219 KEWNRNRAILLIARSL----ENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQ 273
            E  +  + + ++  +    ++  +GD+  +     ++ K       +   A  +     
Sbjct: 404 SEKKQIISFIDVSEQIYEGDKHLRQGDIKGAKVFYEKAKKASSE-EPSVYNAFGRLYFIS 462

Query: 274 NKKRKAEVILEKIWKVNPH--PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              + +E   +K   +N    P +     +Y+   ++N V +      LE +      + 
Sbjct: 463 GDPKSSEENFKKALSINKQNIPALQGLIRLYSSQKNQNLVNQYT--KELENLTGNDPSAA 520

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----EIFLLLAQI--EQANSHNTDKILYW 381
           +++ +   +    ++A        K  P        + +L  +I  E+   +N D  L W
Sbjct: 521 IVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNW 580

Query: 382 TQSA 385
              A
Sbjct: 581 ISKA 584



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 96/269 (35%), Gaps = 38/269 (14%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL   A      A    +   +  +   E +  L+ + IA    +Y  A ++ E +    
Sbjct: 347 GLNMKALGEPAKALVYFTKARELDSAFAEPVTNLVFLLIAE--NRYKAARKEAESLKSES 404

Query: 151 ATREF------------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
             ++                 L     R GD+  A+ +  KA   S + P V  A  + Y
Sbjct: 405 EKKQIISFIDVSEQIYEGDKHL-----RQGDIKGAKVFYEKAKKASSEEPSVYNAFGRLY 459

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCD 257
            ++ +   +     +     K      A+  + R   +    +++  Y   +E+L     
Sbjct: 460 FISGDPKSSEENFKKALSINK--QNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDP 517

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL--------LS 304
           +   A+I   ++   + +  KAE + + + K  P+ E     +A +Y  +          
Sbjct: 518 S---AAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNH 574

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK 333
           ++ +  + +A +L +   E  E+   + +
Sbjct: 575 DSALNWISKAEKLTKDIPEIAETRKTIQE 603


>gi|116329495|ref|YP_799215.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 1197

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 5/179 (2%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +Y G   +   +I  A+  +    +      E  VY    ++         + E  +  L
Sbjct: 419 IYEGDKHLRQGDIKGAKVFYEKAKK--ASSEEPSVYNAFGRLYFISGDPKSSEENFKKAL 476

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            I      A+  L        + N   +Y  +  +++ + P     + + Y   KE+ +A
Sbjct: 477 SINKQNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536

Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
                 L +K  N +  N   A+L    SLE  +K +  ++ +   ++ KL  +    +
Sbjct: 537 ENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNWISKAEKLTKDIPEIA 595



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 96/269 (35%), Gaps = 38/269 (14%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL   A      A    +   +  +   E +  L+ + IA    +Y  A ++ E +    
Sbjct: 347 GLNMKALGEPAKALVYFTRARELDSAFAEPVTNLVFLLIAE--NRYKAARKEAESLKSES 404

Query: 151 ATREF------------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
             ++                 L     R GD+  A+ +  KA   S + P V  A  + Y
Sbjct: 405 EKKQIISFIDVSEQIYEGDKHL-----RQGDIKGAKVFYEKAKKASSEEPSVYNAFGRLY 459

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCD 257
            ++ +   +     +     K      A+  + R   +    +++  Y   +E+L     
Sbjct: 460 FISGDPKSSEENFKKALSINK--QNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDP 517

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL--------LS 304
           +   A+I   ++   + +  KAE + + + K  P+ E     +A +Y  +          
Sbjct: 518 S---AAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNH 574

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK 333
           ++ +  + +A +L +   E  E+   + +
Sbjct: 575 DSALNWISKAEKLTKDIPEIAETRKTIQE 603



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 83/244 (34%), Gaps = 23/244 (9%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  ++   G+   A  Y T+A ++          +V   +    +  A        K+ 
Sbjct: 347 GLNMKAL--GEPAKALVYFTRARELDSAFAEPVTNLVFLLIAENRYKAARKEAES-LKSE 403

Query: 219 KEWNRNRAILLIARSL----ENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQ 273
            E  +  + + ++  +    ++  +GD+  +     ++ K       +   A  +     
Sbjct: 404 SEKKQIISFIDVSEQIYEGDKHLRQGDIKGAKVFYEKAKKASSE-EPSVYNAFGRLYFIS 462

Query: 274 NKKRKAEVILEKIWKVNPH--PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              + +E   +K   +N    P +     +Y+   ++N V +      LE +      + 
Sbjct: 463 GDPKSSEENFKKALSINKQNIPALQGLIRLYSSQKNQNLVNQYT--KELENLTGNDPSAA 520

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----EIFLLLAQI--EQANSHNTDKILYW 381
           +++ +   +    ++A        K  P        + +L  +I  E+   +N D  L W
Sbjct: 521 IVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNW 580

Query: 382 TQSA 385
              A
Sbjct: 581 ISKA 584


>gi|115374950|ref|ZP_01462222.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310819224|ref|YP_003951582.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368077|gb|EAU67040.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309392296|gb|ADO69755.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 641

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 90/287 (31%), Gaps = 26/287 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVY---LLEVQ-----IALAERQYNIAHEKLEMMLQIP 150
           N+  A +  + V      + E L     L   +         + +   A E L   ++  
Sbjct: 148 NLGEALQRAARVDDAIEAYREALKLDEGLTSARVNLGKALAEKGRLAEAKETLLKAIERA 207

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A Y+L     R  DL  A     KAL++ P        +   +    + ++A+  
Sbjct: 208 PLDAEARYNLGVLRMRENDLAGAMGEYRKALELQPRHASAHNNLGVAHDELGQHAQAVEA 267

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKS 269
             +      ++    A       L     GD   +     ++L L               
Sbjct: 268 FKKAIAAEPKY----AEAHFNLGLAYFRLGDNARATKSFEKALLLEPRRSSGPYTQLGHL 323

Query: 270 LISQNKKRKAEVILEKIWKV---------NPHPEIANIY-THLLSENTVGKLKRALRLEE 319
            ++Q KK +A    ++               H  +A  Y      ++ V  LK A    E
Sbjct: 324 YLAQGKKDRAVEAFKRALAASGDDGLKTTEAHQGLARAYLAQGRVDDAVATLKTA---VE 380

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              + V +           G +D A A+   ++ ++P  E  L LA+
Sbjct: 381 DFPKDVGARAAYGDALKAKGDLDGAIAQYEQSVALSPTPEARLALAE 427



 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 80/270 (29%), Gaps = 22/270 (8%)

Query: 133 ERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 A       +    + P  R      L   +  + + + A    + A ++SP+  
Sbjct: 88  SGDTEKARALLDTAIAAFPEEPTLRS--ERGLL--ARVLDETDVAITQYSVAAELSPNDA 143

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +   + +    A     AI    +  K  +     R  L        A+KG +  +   
Sbjct: 144 ELRFNLGEALQRAARVDDAIEAYREALKLDEGLTSARVNL----GKALAEKGRLAEAKET 199

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLL 303
            +++++       A        + +N    A     K  ++ P     H  +   +  L 
Sbjct: 200 LLKAIERAPLDAEARYNLGVLRMRENDLAGAMGEYRKALELQPRHASAHNNLGVAHDELG 259

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI--F 361
                  ++   +      +  E+   +      +G   +A      A+ + PR+    +
Sbjct: 260 QH--AQAVEAFKKAIAAEPKYAEAHFNLGLAYFRLGDNARATKSFEKALLLEPRRSSGPY 317

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             L  +  A       +    + AL A  D
Sbjct: 318 TQLGHLYLAQGKKDRAVEA-FKRALAASGD 346



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 77/282 (27%), Gaps = 30/282 (10%)

Query: 91  GLMSIAAHNIPLARKMHSYVS----QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           GL      +   A K          ++ +     L +L   Q      + + A E  +  
Sbjct: 286 GLAYFRLGDNARATKSFEKALLLEPRRSSGPYTQLGHLYLAQ-----GKKDRAVEAFKRA 340

Query: 147 LQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           L            A   L       G ++ A      A++  P       A         
Sbjct: 341 LAASGDDGLKTTEAHQGLARAYLAQGRVDDAVATLKTAVEDFPKDVGARAAYGDALKAKG 400

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +   AI    Q    +       A+      +    K   +       E LK   +   A
Sbjct: 401 DLDGAIAQYEQSVALSPTPEARLALAEAYALMRVGTKSQPLYE-----ELLKEDASHRAA 455

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------AL 315
            +  A   ++  +  + E +L            A+            +L+R         
Sbjct: 456 KLGLADLYLAMGRYVEVEALLTPREGEE-----ADTAALARLGIMHSRLQRPDKALPLLE 510

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           ++ E +   +++   + ++ L  G  D+A       +   PR
Sbjct: 511 QVAEKDPAQLDARAELGQLYLRGGDKDKAVRVLGDVLATEPR 552



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 85/320 (26%), Gaps = 47/320 (14%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH----NEYLVYLLEV--- 127
            L +   D+  +A    L   A+ +  L          +        ++ +  L      
Sbjct: 324 YLAQGKKDRAVEAFKRAL--AASGDDGLKTTEAHQGLARAYLAQGRVDDAVATLKTAVED 381

Query: 128 ------------QIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFES---CRIGD 169
                           A+   + A  + E    +   P  R         E+    R+G 
Sbjct: 382 FPKDVGARAAYGDALKAKGDLDGAIAQYEQSVALSPTPEARLA-----LAEAYALMRVG- 435

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              +Q    + L            +   Y+    +      L       +E        L
Sbjct: 436 -TKSQPLYEELLKEDASHRAAKLGLADLYLAMGRYVEVEALLT-----PREGEEADTAAL 489

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
               + ++       +     +  +     + A     +  +    K KA  +L  +   
Sbjct: 490 ARLGIMHSRLQRPDKALPLLEQVAEKDPAQLDARAELGQLYLRGGDKDKAVRVLGDVLAT 549

Query: 290 NP-HPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            P HP +  +Y          T    K      +++  + E    + ++    G +D+A 
Sbjct: 550 EPRHP-LGLLYLGQALYALGKTKQSEKSFQAAVQVDPNAAEPHNALGQLLEASGRLDEAK 608

Query: 346 AKAMLAMKI---APRKEIFL 362
            +   A+++          L
Sbjct: 609 KEYAKAVELQSNHTDARAAL 628


>gi|22001550|sp|Q9WX71|BCSC4_ACEXY RecName: Full=Cellulose synthase 2 operon protein C; Flags:
           Precursor
 gi|4827170|dbj|BAA77596.1| bcsCII [Gluconacetobacter xylinus]
          Length = 1307

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 91/288 (31%), Gaps = 28/288 (9%)

Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L  +I  A    +Y+ A   L  + + P      +      + R GD   A R   + + 
Sbjct: 427 LVARIVQAINAGRYDAARADLATLGRRPGYGLTVLSLQAALARRQGDTADAVRLYREVVR 486

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241
            +P       ++    V   + + A   L + ++       R  A++L A++      GD
Sbjct: 487 RAPRDAGALFSLGALDVQVGDATEAADILTRLQRLAPAMARRLEAMMLSAQA---DRAGD 543

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--- 298
                     +  L  +     +  A +L        A+ +++      P    A     
Sbjct: 544 DDGRIALLRRAQALDPDDPWVRLKLAHALDDAGDHAAAQAMMDA--LTAPRNASAQALQA 601

Query: 299 ---YTHLLSENT-----VGKLKRALRLEEINKESVESLVIVSK--IALEMGSIDQAHAKA 348
              Y     +       + ++ R  R  ++  + + SLV++ +   AL    +    A  
Sbjct: 602 GIIYAMGRHDTATAGALLERMPRTGRTPDM--DRLASLVVLDQRIAALNHAPVAGNAAVL 659

Query: 349 MLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSA--LHAMPDPL 393
            LA +  P  +    + A +  A     D           L   P P 
Sbjct: 660 ALADQPDPTGERGMRIAAALL-ARHAPQD-ARQALARGESLTQPPTPA 705


>gi|320352889|ref|YP_004194228.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320121391|gb|ADW16937.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 210

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 11/199 (5%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E+ +  DL++      K ++  P+       +   Y  A     AI  L +      E
Sbjct: 1   MTEAQKPADLSAVIGELEKIVEEKPNNVMARHHLGLIYRQAGRIDEAIAQLEKAI----E 56

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            +      +I       D+GD   +     ++L +  +   A +        + +  KA 
Sbjct: 57  LDNQSMESMINLGAIFFDRGDTDRALELNQQALAISPDMAEAHVNIGLIRQHRGEVDKAV 116

Query: 281 VILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIA 335
               K  +++  P++   + +L S     E     +  A +   +  +S  +   ++   
Sbjct: 117 ACYSKAVQID--PKLITAWINLTSAYTMLEQDDKAVDAARQAVTLEPDSAMARNNLAVAL 174

Query: 336 LEMGSIDQAHAKAMLAMKI 354
              G   ++      A ++
Sbjct: 175 YFKGDFAESQRNMEKAKEL 193



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 4/154 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             + + A  +LE  +++      ++ +L       GD + A     +AL ISPD      
Sbjct: 41  AGRIDEAIAQLEKAIELDNQSMESMINLGAIFFDRGDTDRALELNQQALAISPDMAEAHV 100

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        E  +A+   ++  +   +     A + +  +    ++ D   +   A ++
Sbjct: 101 NIGLIRQHRGEVDKAVACYSKAVQ--IDPKLITAWINLTSAYTMLEQDD--KAVDAARQA 156

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L  +S MA    A +L  +    +++  +EK 
Sbjct: 157 VTLEPDSAMARNNLAVALYFKGDFAESQRNMEKA 190


>gi|258591929|emb|CBE68234.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 352

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 73/264 (27%), Gaps = 21/264 (7%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             E +   A E     L++  TR F VY    E+   G          KA      A +V
Sbjct: 42  QQEGRLAEAIEAFRSTLRLAPTRAF-VYVKLKEAYGRGRTGDQVGTELKAKADQDGADFV 100

Query: 191 TEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +  ++   Y     W+ AI  L +  +                   +++      +    
Sbjct: 101 SWNLLGVLYAKQGRWAEAIAALERTVQIQPA----DVDAWTNLGWLSSELKQSQKAREAF 156

Query: 250 IESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIWKVNP------HPEIANIYTHL 302
             +L L      A    A      + +  KA           P      +      Y   
Sbjct: 157 RRALALDSAYGRAHAGLAGLYAETEGEYDKAIEEYRLALAAEPGNSDYLYDMGWVYYRKG 216

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           ++++ +  L  A  L     +       +    L       A  +   A++  P      
Sbjct: 217 MTDDALKILTEASTLS---PDDPAGRTKIGWARLRRKEYQVAIEEFERALRAQPEYTFAR 273

Query: 363 L-LAQIEQANSHNTDKI----LYW 381
             LA+  QA  ++   +      W
Sbjct: 274 FGLARALQAEGNDDAAVVEYKRAW 297



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 53/193 (27%), Gaps = 6/193 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G    A     + + I P        +       K+  +A     +       + R  
Sbjct: 111 KQGRWAEAIAALERTVQIQPADVDAWTNLGWLSSELKQSQKAREAFRRALALDSAYGRAH 170

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A L    +    +    I  Y  A+ +     + +            +     A  IL +
Sbjct: 171 AGLAGLYAETEGEYDKAIEEYRLALAAEPGNSDYL---YDMGWVYYRKGMTDDALKILTE 227

Query: 286 IWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              ++P          +  L  +     ++   R      E   +   +++     G+ D
Sbjct: 228 ASTLSPDDPAGRTKIGWARLRRKEYQVAIEEFERALRAQPEYTFARFGLARALQAEGNDD 287

Query: 343 QAHAKAMLAMKIA 355
            A  +   A + A
Sbjct: 288 AAVVEYKRAWREA 300


>gi|167031824|ref|YP_001667055.1| response regulator receiver protein [Pseudomonas putida GB-1]
 gi|166858312|gb|ABY96719.1| response regulator receiver protein [Pseudomonas putida GB-1]
          Length = 535

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 21/174 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184
             Q A A+  Y  A +   +M          +Y    E     GD   AQ    +A+ +S
Sbjct: 211 RGQNAQAQGVYEQALKAFPIMP--------GLYDGMAEVLVAQGDTRRAQNLLEEAVRLS 262

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--------ILLIARSLEN 236
           P +      + +  +  +++  A           +      A         L+   +   
Sbjct: 263 PLSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFG 322

Query: 237 ADKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKI 286
            D    +       E  K         + A +  A SL        A  + E+ 
Sbjct: 323 LDARTRVEINTTLSEVAKENPEDQGLQVRARMMKAASLQQAGDPETAGKLTEQA 376


>gi|72382931|ref|YP_292286.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002781|gb|AAZ58583.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 681

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 21/218 (9%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A       ++I      A Y+L      +G L  A+    KA++I PD       
Sbjct: 174 GKLQEAELSYRKAIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIKPDFAEAHYN 233

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +   A     +  +   ++    A           D G +  +     +++
Sbjct: 234 LGNILNDLGKLQEAELSYRKAIEIKPDF----AEAHYNLGNILNDLGKLQEAELSYRKAI 289

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           ++  +   A       L    K ++AE+   K  ++   P+ A  + +L +      LK 
Sbjct: 290 EIKPDFAEAHYNLGNLLKELGKLQEAELSYRKAIEIK--PDFAEAHYNLGN-----LLKE 342

Query: 314 ALRLE----------EINKESVESLVIVSKIALEMGSI 341
             +L+          EI  +  E+   +S + L  G  
Sbjct: 343 LGKLQEAELSYRKAIEIKPDYAEAFWNLSLLELLQGDY 380



 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 22/198 (11%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +   Y  KA++I PD       +        +   A     +  +   ++    A   
Sbjct: 177 QEAELSY-RKAIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIKPDF----AEAH 231

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
                   D G +  +     +++++  +   A       L    K ++AE+   K  ++
Sbjct: 232 YNLGNILNDLGKLQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAIEI 291

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEE----------INKESVESLVIVSKIALEMG 339
              P+ A  + +L +      LK   +L+E          I  +  E+   +  +  E+G
Sbjct: 292 K--PDFAEAHYNLGN-----LLKELGKLQEAELSYRKAIEIKPDFAEAHYNLGNLLKELG 344

Query: 340 SIDQAHAKAMLAMKIAPR 357
            + +A      A++I P 
Sbjct: 345 KLQEAELSYRKAIEIKPD 362



 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 84/232 (36%), Gaps = 15/232 (6%)

Query: 133 ERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           +     A +  +  +       R F+ Y +      +G L  A+    KA++I PD    
Sbjct: 71  QGNIPEAAKYYKNFINKGFKDERAFSNYGVIL--KSLGKLKEAEISTRKAIEIKPDFAKA 128

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +        +   A     +  +   ++    A           D G +  +     
Sbjct: 129 HYNLGNILNDLGKLKEAEISTRKAIEIKPDY----ADAYSNLGNILNDLGKLQEAELSYR 184

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVG 309
           +++++  +   A       L    K ++AE+   K  ++   P+ A  + +L +  N +G
Sbjct: 185 KAIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIK--PDFAEAHYNLGNILNDLG 242

Query: 310 KLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           KL+ A     +  EI  +  E+   +  I  ++G + +A      A++I P 
Sbjct: 243 KLQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAIEIKPD 294



 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 11/195 (5%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G L  A+    KA++I PD       +        +   A     +  +   ++    A 
Sbjct: 140 GKLKEAEISTRKAIEIKPDYADAYSNLGNILNDLGKLQEAELSYRKAIEIKPDY----AE 195

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                     + G +  +     +++++  +   A       L    K ++AE+   K  
Sbjct: 196 AHYNLGNLLKELGKLQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAI 255

Query: 288 KVNPHPEIANIYTHLLSE-NTVGKLKRAL----RLEEINKESVESLVIVSKIALEMGSID 342
           ++   P+ A  + +L +  N +GKL+ A     +  EI  +  E+   +  +  E+G + 
Sbjct: 256 EIK--PDFAEAHYNLGNILNDLGKLQEAELSYRKAIEIKPDFAEAHYNLGNLLKELGKLQ 313

Query: 343 QAHAKAMLAMKIAPR 357
           +A      A++I P 
Sbjct: 314 EAELSYRKAIEIKPD 328


>gi|154247338|ref|YP_001418296.1| TPR repeat-containing protein [Xanthobacter autotrophicus Py2]
 gi|154161423|gb|ABS68639.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus
           Py2]
          Length = 781

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 37/159 (23%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---H 292
              +GD+  +       LKL  +    ++  A       ++R+A+ +LE+  K NP    
Sbjct: 611 LLRRGDVAGAEAQYRAGLKLQPDLPALAVNLADLYRLTGREREAQDVLERAIKANPDAAA 670

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESV---------------------ESLVIV 331
           P  A     +  +     L    R  E+  ++                       +   +
Sbjct: 671 PRHALGLALIRQKRYGEALNELKRAYELAPDNARYAYVYAVALQSLGRAQDSAAVTRDAL 730

Query: 332 SKI-------------ALEMGSIDQAHAKAMLAMKIAPR 357
           +++             AL  G +D+A         + P 
Sbjct: 731 ARVPNDVDLLSLQLNEALRAGDVDRAREAVSKLTLLRPD 769


>gi|327539659|gb|EGF26267.1| TPR repeat-containing protein [Rhodopirellula baltica WH47]
          Length = 521

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 55/170 (32%), Gaps = 24/170 (14%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L + +   +E        L   +       +   +Y  A +++++  +   +    A+ L
Sbjct: 123 LPESQAKKEEAREIDLFALQDDAAIALQADNHDKAYQLARQAMRIAPSDPTSVFLMARVL 182

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV---------GKLKRALRLEEIN 321
             +N+  +A  +L+K+    P     +    +L +               +R   L +  
Sbjct: 183 GRRNRFPEAIQMLDKLALTTP-----DARLPVLGQTAQWMVQFGMWKDAEQRFRLLLQEA 237

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
            E+      ++++ +  G   +A        K          L  IE+  
Sbjct: 238 PEATLVHRKLAELLVRQGKSSEAMEHLQTLCK----------LGDIEEIE 277


>gi|298529797|ref|ZP_07017200.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511233|gb|EFI35136.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 568

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 4/124 (3%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLV-YLLEVQIALAERQYNIAHEKLE-MMLQI 149
           + ++     P  ++  +  + +       +  + L+     A   +  A   LE  ++  
Sbjct: 10  IAAVVLGCAPKTQQPETAKTGRELTPQAQVTYHYLKSLDYQAAGDHEKAALALEKALVLG 69

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P+ R      L  E  R G+   A      A  I P  P +   + + Y++  + S A+ 
Sbjct: 70  PSVRL--YQDLAREYLRQGEKQKAVDILQDATGIYPRTPELYFQMAEFYLVKGDRSGAVK 127

Query: 210 FLNQ 213
            L +
Sbjct: 128 ALEK 131


>gi|70982436|ref|XP_746746.1| heat shock protein (Sti1) [Aspergillus fumigatus Af293]
 gi|66844370|gb|EAL84708.1| heat shock protein (Sti1), putative [Aspergillus fumigatus Af293]
 gi|159123013|gb|EDP48133.1| heat shock protein (Sti1), putative [Aspergillus fumigatus A1163]
          Length = 585

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 16/153 (10%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                  +  A E     L    T      + +             A+  A K   I P 
Sbjct: 346 AYEKLGDFTQAIEYYHKSLTEHRTPDALTKLRN----------AEKAKVKAEKEAYIDPV 395

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  + Q+     +W  A+    +  K A    R        R+           + 
Sbjct: 396 EAEKARELGQKKFQEADWPGAVEAFTEMTKRAPHDPRG----FSNRAAALIKLMAFPQAV 451

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            D  E+++     I A I  +++L++  +  KA
Sbjct: 452 QDCDEAIRRDPKFIRAYIRKSQALVAMKEYSKA 484


>gi|312882497|ref|ZP_07742238.1| tetratricopeptide repeat protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369897|gb|EFP97408.1| tetratricopeptide repeat protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 90/287 (31%), Gaps = 51/287 (17%)

Query: 98  HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +   T   + +      +  +A    + A +  + ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGLLDRAEKIFKQLVDEPDHREG 142

Query: 156 AVYSLYFESCRIGDLNSAQRYA-------TKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           A+  L     +  + + A  Y+        K +  +    W   A+  +       + AI
Sbjct: 143 ALQQLVSIYQQTREWDQAIHYSSMLVKMGRKMMRANISHFWCELAMQDK--ADGATTAAI 200

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
               +    +++    RA + +       ++ +   + H     LK   + +        
Sbjct: 201 ASFKRAL--SEDSKCVRASISLG--KIYLEQENYDKTLHYLTMVLKQDSDFV-------- 248

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
                        +L         P IA  Y  L  EN +    R   +      S E  
Sbjct: 249 -----------SEVL---------PTIAECYHQLGQENELLNFLR-QCIANKVGVSAE-- 285

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370
           ++++++  +    D A       +   P     + L+    A+ E+ 
Sbjct: 286 LMLAQLVSQHDGADAAQELLTRQLVKNPTMKGFYRLMDYHLAEAEEG 332


>gi|307580114|gb|ADN64083.1| HemY domain-containing protein [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 123/368 (33%), Gaps = 21/368 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRL-YRTSPFVILSILYFFLFAW 55
           +  L  +FF++ L I S   +   P     DV I  G      T P   + +L   L  W
Sbjct: 4   LRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDCITTVPQATILLLIIVLLLW 63

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115
            L   +             +  +  Y +G+  L  GL ++      LA ++    S+   
Sbjct: 64  SLRSLLVLPI--------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTE 115

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
                L     +++A     ++ A+     + +   T    + S    + +  +      
Sbjct: 116 VSAIALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVL 173

Query: 176 YATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            A +   + P         ++Q     + +S   T   Q+  +  E+ R     +     
Sbjct: 174 DALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIR 233

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHP 293
           +  D   +   +    ++LK   N +      A  L  +N    + E  LE+ W  N   
Sbjct: 234 QAKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN--- 290

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +  +Y  L  +    +  RA     ++ +S   L+ + ++AL      QA      A+ 
Sbjct: 291 -LIRLYGFLPLKEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALRQQEYSQAETFLRRAID 349

Query: 354 IAPRKEIF 361
                E +
Sbjct: 350 KETNAETW 357


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 17/100 (17%)

Query: 133 ERQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRI-GDLNSAQRYATKALDISPDA 187
             +   A + +  M   P                 +CR+  DL+  +  A K L++ P  
Sbjct: 465 AGKLQEAEKYISKMPSEPEIVTWASLLG-------ACRVHKDLDRGKLAARKLLELDPGN 517

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
              +  +   Y    +W  A      K + A    R + +
Sbjct: 518 SSASVVLSNIYSERGDWKNA-----AKLRRAMASRRVKKV 552


>gi|298480715|ref|ZP_06998911.1| TPR-repeat-containing protein [Bacteroides sp. D22]
 gi|298273149|gb|EFI14714.1| TPR-repeat-containing protein [Bacteroides sp. D22]
          Length = 272

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 9/169 (5%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  K  +  N   A+L     L     G+   +      +L     ++   +  
Sbjct: 40  AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98

Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321
           A   +   K  +A      +L++  K N    +   Y + L  +    ++    RL E++
Sbjct: 99  AAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
            +S    + ++ +  + G   +A       +   P    +++  A +E+
Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALEILNKMLAATPEDATLYIARADVER 205



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 6/166 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           + L    I +   + + A+    +++ +    +E  +   Y    R  D  +A+    + 
Sbjct: 94  ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L++ P +      +        ++  A+  LN+      E     A L IAR+    +  
Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMLAATPE----DATLYIARADVEREMK 208

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  D  E+++L   S  A +      ++Q KK  A+   EK 
Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254


>gi|53714051|ref|YP_100043.1| putative N-acetylglucosamine transferase [Bacteroides fragilis
           YCH46]
 gi|52216916|dbj|BAD49509.1| putative N-acetylglucosamine transferase [Bacteroides fragilis
           YCH46]
          Length = 482

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             A     K +D +P  P  WV  A  +     K++ +AI   +      +E+    A +
Sbjct: 192 EQAIVVFNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAIESCDFAIAADEEFG--EAHI 247

Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNS----IMASICAAKSLISQNKK-RKAEVI 282
           + A SL + +  +  I  Y  A++   L        I  +    ++    N+    A   
Sbjct: 248 IKAHSLFHLENIEGAIVEYRKALKYKTLSPEFTYMFIGLAYTQQENWAEANESYSMALRA 307

Query: 283 LEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEE-INKESVESLVIVSKIALE 337
           +E+       P +++IY++       +    +  R  RL + +  +  E  ++  +I +E
Sbjct: 308 IEEN-GNGSSPLLSDIYSNKALCASRQGDSEEAHRLCRLAKELAPQDAEPYLLEGRIYME 366

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362
             + D A A+  LA++ AP  + ++
Sbjct: 367 EDNFDLARAEWALALRYAPEADTWM 391


>gi|295669658|ref|XP_002795377.1| pre-mRNA-splicing factor CLF1 [Paracoccidioides brasiliensis Pb01]
 gi|226285311|gb|EEH40877.1| pre-mRNA-splicing factor CLF1 [Paracoccidioides brasiliensis Pb01]
          Length = 677

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 75/240 (31%), Gaps = 26/240 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185
             A    +  + ++P  +  A++  Y    +  GD              +Y  + +  SP
Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKESP 318

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239
               +    V+    + +  R      +              R    L I  +L E  + 
Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378

Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            DM  +     E LKL            +  A+  I Q   + A   L       P  ++
Sbjct: 379 KDMERARQIYQECLKLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              Y  L     E    + K   +  E +  + ++ +  +++   +  ID+A A   L +
Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497


>gi|167625825|ref|YP_001676119.1| HemY domain-containing protein [Shewanella halifaxensis HAW-EB4]
 gi|167355847|gb|ABZ78460.1| HemY domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 68/418 (16%), Positives = 130/418 (31%), Gaps = 57/418 (13%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL--- 57
           M+R + Y  +I L +C    +      + +  G+    TS    +  L  F     L   
Sbjct: 1   MVRALVYLIIILLGLCISPFLVGSKGYLYLAIGDYQIETSIVFAIIALIIFYSLLQLVEF 60

Query: 58  -LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115
            +       LS   +      K            G +++A  + P A K M     +   
Sbjct: 61  VVVWFLNMVLSSRYLPERWRKKAARKHTLL----GALALAEEDWPAAEKAMAKGAEKGEI 116

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESC 165
                L      + A  +     A ++           E   +   TR            
Sbjct: 117 ---PALNLFAAARAAHHQNN-IQARDEYLAKAQLEPQAEKAARTTRTRYL---------L 163

Query: 166 RIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKE 220
           + GDL +A+    +   ++P      P +  A +  Y   ++W      L    KK+  +
Sbjct: 164 QQGDLVAAR---EELDKLNPTSKSKLPILKLA-IDLYQAQQDWQSLKLLLPIVNKKHVLD 219

Query: 221 WNRNRAI-----LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +   A+       +      A++ ++   +H      +     I      A  L    +
Sbjct: 220 DDAFSALSLKTNTALLSQAAKANEQELEKCWHWLTRGERKQAEYI---ALYAIGLSRFER 276

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           K +A  +L K  K +P   + N  + +L+   V   K+ L LE   + SV+  + ++K+ 
Sbjct: 277 KDEAVKMLLKQVKASPSAPVLNALSQVLTPADVEAKKQLLALEPQYENSVDYQICLAKLY 336

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            +     QA      A  +         LA  ++               AL    +  
Sbjct: 337 QQNHDYHQAKIWWQKACYLQDDINSLHALADAQEHLGE--------LNRALQTRRNAA 386


>gi|86160228|ref|YP_467013.1| hypothetical protein Adeh_3810 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776739|gb|ABC83576.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 969

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 6/212 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY 158
              AR          T     L ++   +   AE +   A +     + + P   E A+ 
Sbjct: 762 GRAARGRALLEKLAATRSPPPLAHVALGRALEAEGRAADAEKAYRDAVTRDPRAPEPAL- 820

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L     R G    A  +  KA+ + P  P    A+    +   E S A   L+      
Sbjct: 821 ALGDLLLRRGRAGDALPFLEKAVALDPADPEARRALGAARLAGGEASAARAELDAVLLAR 880

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                  A  L   S     +     +   A   L +        +  A++ ++   +  
Sbjct: 881 P----KDAAALRLLSAAWLAEAQPAEARRAAERGLAVAPRDPALLLAGARAALADGDRAV 936

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           A  + E+  K     E A     L +  T  +
Sbjct: 937 ARALAERALKAGARGEDAAEARRLAATQTAKR 968



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 54/200 (27%), Gaps = 8/200 (4%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLK 254
                 +++ A   L +  ++     R  A   +  +L +  +G           + + +
Sbjct: 723 ARYRLGQFAAARAELERTARDG----RMPAEAAVWYALTDVAQGRAARGRALLEKLAATR 778

Query: 255 LCDNSIMASICAA-KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                   ++  A ++        KA           P P +A     L        L  
Sbjct: 779 SPPPLAHVALGRALEAEGRAADAEKAYRDAVTRDPRAPEPALALGDLLLRRGRAGDALPF 838

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
             +   ++    E+   +    L  G    A A+    +   P+    L L         
Sbjct: 839 LEKAVALDPADPEARRALGAARLAGGEASAARAELDAVLLARPKDAAALRLLSAAWLAEA 898

Query: 374 NTDKILYWTQSALH-AMPDP 392
              +     +  L  A  DP
Sbjct: 899 QPAEARRAAERGLAVAPRDP 918


>gi|26987504|ref|NP_742929.1| response regulator/TPR domain-containing protein [Pseudomonas
           putida KT2440]
 gi|148546041|ref|YP_001266143.1| response regulator receiver protein [Pseudomonas putida F1]
 gi|24982171|gb|AAN66393.1|AE016267_2 response regulator/TPR domain protein [Pseudomonas putida KT2440]
 gi|148510099|gb|ABQ76959.1| response regulator receiver protein [Pseudomonas putida F1]
          Length = 535

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 21/174 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184
             Q A A+  Y  A +   +M          +Y    E     GD   AQ    +A+ +S
Sbjct: 211 RGQNAQAQGVYEQALKAFPIMP--------GLYDGMAEVLVAQGDTRRAQNLLEEAVRLS 262

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--------ILLIARSLEN 236
           P +      + +  +  +++  A           +      A         L+   +   
Sbjct: 263 PLSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFG 322

Query: 237 ADKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKI 286
            D    +       E  K         + A +  A SL        A  + E+ 
Sbjct: 323 LDARTRVEINTTLSEVAKENPEDQGLQVRARMMKAASLQQAGDPETAGKLTEQA 376


>gi|21230633|ref|NP_636550.1| histidine kinase/response regulator hybrid protein [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66769371|ref|YP_244133.1| histidine kinase/response regulator hybrid protein [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188992557|ref|YP_001904567.1| Putative two-component system sensor histidine kinase-response
           regulator hybridprotein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112216|gb|AAM40474.1| histidine kinase/response regulator hybrid protein [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66574703|gb|AAY50113.1| histidine kinase/response regulator hybrid protein [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|167734317|emb|CAP52527.1| Putative two-component system sensor histidine kinase-response
           regulator hybridprotein [Xanthomonas campestris pv.
           campestris]
          Length = 646

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 18/203 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 70  RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLVATLRTLLRARN 129

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +              A L    +     +    A+  +AI    L   
Sbjct: 130 AEEALRLSEARFREIFEHIGAPIAVVDAQLHTQEANAAFQRLIGSATPCEAINVPGLDQC 189

Query: 259 SIMASICAAKSLISQNKKRKAEVIL------EKIWKVNPH--PEIANIYTHLLSENTVGK 310
           + + ++ AA  L  + +      IL      E  W+V+P+  P++  ++     + T  +
Sbjct: 190 ATVQALTAA--LGRRERWSGTLSILRDGAVRETEWRVSPYREPDLGLLFVE---DVTEQR 244

Query: 311 LKRALRLEEINKESVESLVIVSK 333
           L+   + +E++  + E    +++
Sbjct: 245 LREREQRQELDTATSELAHQIAE 267


>gi|295131954|ref|YP_003582630.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87]
 gi|294979969|gb|ADF50434.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87]
          Length = 445

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 20/229 (8%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y  A+E L+  L I        Y +      + +   A+ Y  KALD+ P+   +    
Sbjct: 46  NYEKANEALQKCLAINDQSPVIYYEIAKNHYSLEEFEQAKAYFQKALDLKPNDENILREY 105

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR-----SLENADKGDMIASYHDA 249
            +  + + ++  AI  L +  K   ++  + A L I       +L   D  D+    ++ 
Sbjct: 106 YENEIASVDYESAIQILQKLIKIDTKYREDLADLYILSDRYDNALSLIDSLDIQYGENEY 165

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306
              L+             +     N        LEK  K +P  E   +  IY       
Sbjct: 166 RTHLRR------------QIYARTNNTDAQIANLEKAIKDDPKEEENYLNLIYVLSDEGM 213

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                K A +L +++  S  + + + K  L     ++A     +  K  
Sbjct: 214 EEEAFKTAQQLLQVSPGSSLAHLALYKFYLNKDQPEEAMQSMQMVFKSE 262


>gi|258574475|ref|XP_002541419.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901685|gb|EEP76086.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 920

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 92/265 (34%), Gaps = 37/265 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   KA + +P+   +  A V+    A++  +A   L   ++ A 
Sbjct: 595 LAKEKWQAGEIDNARRVLAKAFNQNPNNEDIWLAAVKLEADAQQTDQARELLATARREAG 654

Query: 220 EWNRNRAILLIARSLENADKG-----------------------------DMIASYHDAI 250
                   +   R L N +                                   +     
Sbjct: 655 TDRVWIKSVAFERQLGNTEAALDLVNQALQLYPKADKLWMMKGQIYETEKKYPQAREAYG 714

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309
              + C  S+   + A++         K+  IL++       P+ A ++T  +  E    
Sbjct: 715 TGTRACPKSVPLWLLASRLEEKLGVVVKSRSILDRARLAV--PKNAELWTESVRIERRAN 772

Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            + +A  +     +E   S ++ S+    LE  +  +  +      K+     +FL +A+
Sbjct: 773 NIGQAKIIMAKALQEVPTSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDNDPILFLTVAR 831

Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391
           I        +K + W + A+ A  D
Sbjct: 832 IFWGERR-LEKAMTWFEKAIVADSD 855


>gi|222087125|ref|YP_002545660.1| O-linked GlcNAc transferase protein [Agrobacterium radiobacter K84]
 gi|221724573|gb|ACM27729.1| O-linked GlcNAc transferase protein [Agrobacterium radiobacter K84]
          Length = 291

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 11/129 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y+ A       L     R +    +  +     D   A    +KA+ +SP++P    +
Sbjct: 163 NDYSKAIS-----LGTTDGRAYNGRGVILQKRNQQD--KAIDDFSKAISLSPNSPEPYNS 215

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               Y+  K+   A    N    +A + +   A     ++     +GD   +      ++
Sbjct: 216 RGISYLAQKDEDNAFADFN----HAIDLDNKVAESWANQAFVYEQRGDKAKARRSYQHAV 271

Query: 254 KLCDNSIMA 262
            L      A
Sbjct: 272 NLDPTYQPA 280


>gi|186517170|ref|NP_195462.3| SRFR1 (SUPPRESSOR OF RPS4-RLD 1); protein complex scaffold
           [Arabidopsis thaliana]
 gi|332661397|gb|AEE86797.1| suppressor of RPS4-RLD 1 / tetratricopeptide repeat
           domain-containing protein [Arabidopsis thaliana]
          Length = 1052

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 17/211 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146
           L  G+  +   N   A  +   V ++   + E L+          +R+   A     + +
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 358

Query: 147 LQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              PA  E          +   G+   A    TKAL   P++P V          +K+++
Sbjct: 359 QSNPAASEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 416

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+  L+   K  K+       L +A +      G+   +    ++S++L  N + A + 
Sbjct: 417 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 472

Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289
            A+         KA   +E+       +WK 
Sbjct: 473 LAQFYQELADHCKALECIEQVLQVDNRVWKA 503


>gi|56476196|ref|YP_157785.1| hypothetical protein ebA1403 [Aromatoleum aromaticum EbN1]
 gi|56312239|emb|CAI06884.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 573

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 95/321 (29%), Gaps = 42/321 (13%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEY-------LVYLLEVQIALAERQYNIAHEKLEM 145
           ++ A   +   R   +    +    N          V LL  Q+      ++ A   LE 
Sbjct: 259 VAYARGLVSARRFEAARDEFRKLLDNAPNDRDLMYAVGLLSAQL----DDFDAAAPLLEQ 314

Query: 146 MLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            L         +  +L   + R  D   A R+    ++           +        + 
Sbjct: 315 ALNAGHPEADGIRLNLGQIAERRDDSEGALRWYRT-VEHGRHHTDAQIRIAALLAQQGKL 373

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD---NSIM 261
            +A   L   +       R R    +A +     +G    +       L+      + + 
Sbjct: 374 QQAREHLQSVQAGPDTIKRLR----LAEAQLLRAEGREAEALELIDGELRKAPEDPDLLY 429

Query: 262 ASICAAKSLIS----QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRA 314
            S   A+ L      + + RK   +          P+ A+ Y + L  +   +   L  A
Sbjct: 430 ESSMLAEQLGQLDVMEGRLRKLISL---------QPDHAHAY-NALGYSLADRGLRLDEA 479

Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
             L     E+       L  +  +    G    A A    A  + P  EI   L ++  +
Sbjct: 480 EALIGRALELTPGDPFILDSMGWVNFRQGDAATALAHLEKAYSLHPDPEIAAHLGEVLWS 539

Query: 371 NSHNTDKILYWTQSALHAMPD 391
            +   D    W + AL A PD
Sbjct: 540 LNRQADATRIWNE-ALQAHPD 559


>gi|148264628|ref|YP_001231334.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146398128|gb|ABQ26761.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 729

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 83/250 (33%), Gaps = 31/250 (12%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPA------TREFAVYSLYFESCRIGDLNSAQRY 176
           + L+  IAL +     A  +   ++           R    ++L  E   + D       
Sbjct: 376 HFLKGSIALLKNDGVNAVAEFRTVVAEQPQSIQGYLRLAEAHALNREMNLMNDTL----- 430

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRA--ILLIAR 232
              AL + P++  V  A+ + Y + K++ +A   L +  +K       R+    + + AR
Sbjct: 431 -QNALKVDPESSDVQRAMARSYAMQKDFRKAEEQLRKLVRKYPGDMEARSDLGDVFVAAR 489

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
               A+                      +A +   +  + + K  +    LEK  ++NP 
Sbjct: 490 DFGRAESEYADLKRK--------VPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPR 541

Query: 293 -----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                  +   Y  L   +    +         N +   +  ++ ++     ++ +A   
Sbjct: 542 ATSFLSSLMQAYLRLNKGDAA--VALLDARIRSNPKDAVAYTLLGQLYGAQKNLPKADQA 599

Query: 348 AMLAMKIAPR 357
              A+++ P 
Sbjct: 600 YSKALELKPD 609



 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 57/159 (35%), Gaps = 13/159 (8%)

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP---- 293
           +KGD + +  +   ++++      A        + +N  + A     K  ++NPH     
Sbjct: 40  EKGDYVKANLEFRNAVQIDPKFADAYYMLGLVELKRNNLKGAYGGFNKAIELNPHNLDAQ 99

Query: 294 -EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            ++  ++  +   +    +++A  + + N    +  ++     +    +D+A       +
Sbjct: 100 YQMGKLFLAVREADKA--MEKAELILKENPRHEDGQLLKGAALVAGKELDKARLYLEEVI 157

Query: 353 K---IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                 P    FLLLA I +    +        +  L A
Sbjct: 158 GGGVRKPDA--FLLLASIAR-LKGDMSGTETALRKGLEA 193



 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 7/136 (5%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146
           L    + +   +  +A       ++  +   + + Y L  Q+  A++    A +   + +
Sbjct: 549 LMQAYLRLNKGDAAVAL----LDARIRSNPKDAVAYTLLGQLYGAQKNLPKADQAYSKAL 604

Query: 147 LQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
              P   T    +  L  E     DL+ A   A KA  I PD   V + +   Y    + 
Sbjct: 605 ELKPDLWTAANDLSFLLCEYGTPKDLDRALSLAQKAQAIRPDDATVLDTLGWIYYRKGDN 664

Query: 205 SRAITFLNQKKKNAKE 220
            +A   L +     K+
Sbjct: 665 RKAEEHLRKALAKGKD 680



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 60/196 (30%), Gaps = 10/196 (5%)

Query: 98  HNIPLARKMHSYVSQQ-----HTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPA 151
            ++ +A +       +            L Y+   ++ + E ++   A E  + +   P 
Sbjct: 482 GDVFVAARDFGRAESEYADLKRKVPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPR 541

Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            T   +  SL     R+   ++A       +  +P        + Q Y   K   +A   
Sbjct: 542 ATSFLS--SLMQAYLRLNKGDAAVALLDARIRSNPKDAVAYTLLGQLYGAQKNLPKADQA 599

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            ++  +   +     A  L     E     D+  +   A ++  +  +            
Sbjct: 600 YSKALELKPDLWTA-ANDLSFLLCEYGTPKDLDRALSLAQKAQAIRPDDATVLDTLGWIY 658

Query: 271 ISQNKKRKAEVILEKI 286
             +   RKAE  L K 
Sbjct: 659 YRKGDNRKAEEHLRKA 674



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 10/227 (4%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           A R +  A  +   + +       A   L       G          KAL I+P A    
Sbjct: 487 AARDFGRAESEYADLKRKVPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPRATSFL 546

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            +++Q Y+   +   A+  L+ + ++        A+           + ++  +     +
Sbjct: 547 SSLMQAYLRLNKGDAAVALLDARIRSNP----KDAVAYTLLGQLYGAQKNLPKADQAYSK 602

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI-----YTHLLSE 305
           +L+L  +   A+   +  L      +  +  L    K     P+ A +     + +    
Sbjct: 603 ALELKPDLWTAANDLSFLLCEYGTPKDLDRALSLAQKAQAIRPDDATVLDTLGWIYYRKG 662

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +     +   +     K++      +  ++ + G  D A      A+
Sbjct: 663 DNRKAEEHLRKALAKGKDNPVMNYHLGMVSQKSGKRDLAKESLDRAL 709


>gi|114320843|ref|YP_742526.1| TPR repeat-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227237|gb|ABI57036.1| Tetratricopeptide TPR_2 repeat protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 295

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 21/135 (15%)

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKR-----ALR 316
           +   ++L +  K  +A        +     HPE+   Y  LL+ +  G+L+        R
Sbjct: 175 VLLGRTLTALGKTEQALESYRAALRHGQDNHPELLARYADLLAGSRDGRLRGDPERLVRR 234

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
             +I+ +   +L +    ALE G    A       + + P             A S +  
Sbjct: 235 ALDIDPDHRLALWLAGSAALERGDAAVARRHWERLLALLP-------------AESDDAG 281

Query: 377 KILYWTQSALHAMPD 391
           KI      AL     
Sbjct: 282 KIREKL-RALDGPRG 295


>gi|302816471|ref|XP_002989914.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii]
 gi|300142225|gb|EFJ08927.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii]
          Length = 899

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 35/189 (18%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A  +  +A  + P      + +        E+  A   L +      ++    A   +  
Sbjct: 348 ACEHYREAAILHPPHYRALKLLGSGLYGVGEYRAAEKALGEAIFLKSDY--ADAHCDLGS 405

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            L     GD   +  +  +++ +  + + A       L    + ++A             
Sbjct: 406 VLHAL--GDDERAIVEFQKAIDIKPDHMDALYNLGGLLRDTGRFQRA------------- 450

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              A +Y+ +L                +N    ++ +  +   L  G  ++A      A 
Sbjct: 451 ---AEVYSRVL---------------SLNPSHWQAQLNRAVSLLGAGDTEEARKALKEAF 492

Query: 353 KIAPRKEIF 361
           K+  R E++
Sbjct: 493 KMTNRVELY 501



 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 94/302 (31%), Gaps = 35/302 (11%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A    + R+    +  + + + + L  L   Q A A R  + A +    M          
Sbjct: 212 AGGDEVVRRTMHDLGTESSVYQKALGDL--RQKADASRTQDEAFDAHMAM---------- 259

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLN 212
             SL+           A     +A ++ P            +       +++  A     
Sbjct: 260 GRSLFDHKF----YEEALICFKRATELRPTDVRPHFRTGNTLYSL----EKFLEAREAYE 311

Query: 213 QKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                A   N     L     +   +    +G ++ +     E+  L      A      
Sbjct: 312 LALDAANTGNPQWTNLVPQIHVNLGVALEGEGMLLNACEHYREAAILHPPHYRALKLLGS 371

Query: 269 SLISQNKKRKAEVIL-EKIWK----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
            L    + R AE  L E I+      + H ++ ++  H L ++    ++   +  +I  +
Sbjct: 372 GLYGVGEYRAAEKALGEAIFLKSDYADAHCDLGSV-LHALGDDERAIVE-FQKAIDIKPD 429

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
            +++L  +  +  + G   +A       + + P      L   +    + +T++     +
Sbjct: 430 HMDALYNLGGLLRDTGRFQRAAEVYSRVLSLNPSHWQAQLNRAVSLLGAGDTEEARKALK 489

Query: 384 SA 385
            A
Sbjct: 490 EA 491


>gi|298242866|ref|ZP_06966673.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|298251366|ref|ZP_06975169.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|298251990|ref|ZP_06975793.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297545958|gb|EFH79826.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297546582|gb|EFH80450.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297555920|gb|EFH89784.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 411

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 16/168 (9%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +Y  A E  + +L++     FA        ++   G    A     + + ++P+   +  
Sbjct: 238 RYEEALEAFKQVLRLQPDNLFAHRKKGQALQAL--GRYEEALIIFGQLIHLTPEDLSLFY 295

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                +  A+ +  A+   +Q  +   +     A+L   + L     G +  +     ++
Sbjct: 296 EKGALFFEAERYCEALAVFDQIFRRNPD----DAMLHYYQGLALLRLGRIQEALGAFEQT 351

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKA----EVIL----EKIWKVNPH 292
           L+L  + + A I   K L+   + ++A    E +L    +  W V  H
Sbjct: 352 LQLDPDYLPAYIAQGKLLVQSGRSQEALHACEQVLRLNPQTAWAVQTH 399


>gi|171910450|ref|ZP_02925920.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
          Length = 264

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 54/157 (34%), Gaps = 6/157 (3%)

Query: 119 EYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
             L   L      A A + +  A +  + ML++         +L     + G L  AQ  
Sbjct: 79  PPLTTGLSELASQAFARKDWKSARKYYQQMLEVDPLNALTHANLGAVEQQAGRLKDAQSL 138

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            ++A+ I+P       A+        +   A++ L +            A      ++  
Sbjct: 139 FSRAVAINPSLQQTWVALGLVSYENGDLYYALSALGRAIHEDPA----DARAHNYMAIVL 194

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
              G + A+  + + +++L  +   A+   A   + +
Sbjct: 195 KKLGWLDAAELELLRAIELNPDYANANFNLALMYLER 231


>gi|154281465|ref|XP_001541545.1| pre-mRNA splicing factor prp1 [Ajellomyces capsulatus NAm1]
 gi|150411724|gb|EDN07112.1| pre-mRNA splicing factor prp1 [Ajellomyces capsulatus NAm1]
          Length = 918

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 29/161 (18%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   +A + +P+   +  A V+    A +   A   L+  ++ A 
Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADANQTEHARELLSTARREAG 675

Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250
                   +   R L N                              ++     +     
Sbjct: 676 TDRVWIKSVAFERQLGNTEQALDLANQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              + C  S+   + A++         KA  IL++     P
Sbjct: 736 TGTRACPRSVPLWLLASRLEEKAGVVVKARSILDRARLAVP 776


>gi|262305031|gb|ACY45108.1| acetylglucosaminyl-transferase [Prokoenenia wheeleri]
          Length = 290

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +P A + ++   +    H + L  L    I   +     A +  +  L++      A 
Sbjct: 34  GLVPEAEECYNTALRLCPTHADSLNNL--ANIKREQGFIEEAMKLYQKALEVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ ISP        +        +   A+    +  + 
Sbjct: 92  SNLASVLQQQGRLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDVQGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G +  +      +LKL  +   A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGSIPEAIASYRTALKLKPDFPDAYCNLAHCL 200



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 +     A E     L++  T   ++ +L       G +  A +   KAL++ P+
Sbjct: 27  ANALKEKGLVPEAEECYNTALRLCPTHADSLNNLANIKREQGFIEEAMKLYQKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +          + A+    +  + +  +    A           + GD+  + 
Sbjct: 87  FAAAHSNLASVLQQQGRLNDALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDVQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
                ++++      A    A          +A        K+   P+  + Y +L    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200

Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324
                  +   ++K+            RL  ++   
Sbjct: 201 QIVCDWTDYDQRMKKLVTIVMDQLDKNRLPSVHPHH 236


>gi|240280843|gb|EER44347.1| pre-mRNA-splicing factor CLF1 [Ajellomyces capsulatus H143]
          Length = 648

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185
             A    +  + ++P ++  A++  Y    +  GD              +Y  + +  +P
Sbjct: 232 ERARAIYKYALDRLPRSKSIALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQVKENP 290

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239
               +    V+    + +  R      +              R    L I  +L E  + 
Sbjct: 291 KNYDIWFDFVRLEESSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELET 350

Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            DM  +     E +KL            +  A+  I Q   + A   L       P  ++
Sbjct: 351 KDMDRARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQTARKTLGHAIGACPKDKL 410

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              Y  +     E    + K   +  + N  + ++ +  +++   +  ID+A A   L +
Sbjct: 411 FKGYIDIERQLFEFVRCR-KLFEKQIKWNPANCQAWIKFAELERGLDDIDRARAIYELGI 469


>gi|255690251|ref|ZP_05413926.1| TPR-repeat-containing protein [Bacteroides finegoldii DSM 17565]
 gi|260624271|gb|EEX47142.1| TPR-repeat-containing protein [Bacteroides finegoldii DSM 17565]
          Length = 272

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 9/175 (5%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L +  K  +  N   A+L     L     G+   +      +L     ++   +  
Sbjct: 40  AEELLLRALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98

Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321
           A   +   K  +A      +L+   K N    +   Y + L  +    ++    RL E++
Sbjct: 99  AAIYMEMGKTDRAYTDYCQVLDGD-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375
            +S    + ++ +  + G   +A A     +   P    +++  A +E+   H  
Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALAILNKMIVEYPEDATLYIARADVERDMKHED 211



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 6/166 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           + L    I +   + + A+    +++      +E  +   Y    R  D  +A+    + 
Sbjct: 94  ILLDRAAIYMEMGKTDRAYTDYCQVLDGDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L++ P +      +        ++  A+  LN+      E     A L IAR+    D  
Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALAILNKMIVEYPE----DATLYIARADVERDMK 208

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  D  E+++L  +S  A +      + Q KK  A+   EK 
Sbjct: 209 HEDLALVDLEEAIRLDASSADAYLLRGNIYLVQKKKALAKSDFEKA 254


>gi|254443715|ref|ZP_05057191.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198258023|gb|EDY82331.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 480

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 61/206 (29%), Gaps = 34/206 (16%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A     +  A + LE  + I    +  +  L      +G++ SA+ Y  +A  I P
Sbjct: 264 AASAADPSNNHARARQLLERAVTIAPNDDLPIRLLGNLMSDLGEMTSARTYLERAAQIDP 323

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---------------------- 223
             P     +V+      +   A   L+    N  E                         
Sbjct: 324 KEPDNWSYLVRVLKAIGDMPAANRALDAGLANCPEAPVLHLEKGRRYAAAGRFEAAAASF 383

Query: 224 --------NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                     +   +  +L    +  +        E +K+  N  +A +  A+  IS   
Sbjct: 384 AFARRNLPEDSTASMELALVYFKQERLEEGVVALHEVVKIDPNHPVAVVLLARYAISNGD 443

Query: 276 KRKAEVILEKIWKVNP---HPEIANI 298
              A   +++  +  P     ++A +
Sbjct: 444 AADAANWIKRA-RKQPKIAARDLAQV 468



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 84/280 (30%), Gaps = 29/280 (10%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            L R++ +      +  N         ++  A    + A E    +++I        Y L
Sbjct: 53  ELGRRLEAAEGSARSLWNSRGGLSELARLYQANGFLSQARECQRSLVEIDPQNPTWPYFL 112

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +   GDL +A     K + ++PD       +    + + + + A T   +      E
Sbjct: 113 GNIAGGYGDLQTALPLLQKTIQLAPDYLPARVRLGDSLMKSNQNAEAATVYREVLSRDPE 172

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                   +   S    + G+  A+    ++ ++       A             +    
Sbjct: 173 ----NGYAITGLSRTELNGGNPDAARQRLLQFVQRQPQFAPAWGLLISIEERLGNE---T 225

Query: 281 VILEKIWKVN--------PHP---EI-ANIY------THLLSENTVGKLKRALRL----E 318
            + E   +          P P   ++ A  Y          + +      RA +L     
Sbjct: 226 AVAEYKLRAQDAGRQREMPDPWIDDLMAECYDPYRLSVAASAADPSNNHARARQLLERAV 285

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            I       + ++  +  ++G +  A      A +I P++
Sbjct: 286 TIAPNDDLPIRLLGNLMSDLGEMTSARTYLERAAQIDPKE 325



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 39/164 (23%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           GD+  +     ++++L  + + A +    SL+  N+  +A                A +Y
Sbjct: 120 GDLQTALPLLQKTIQLAPDYLPARVRLGDSLMKSNQNAEA----------------ATVY 163

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-K 358
             +LS +                E+  ++  +S+  L  G+ D A  + +  ++  P+  
Sbjct: 164 REVLSRD---------------PENGYAITGLSRTELNGGNPDAARQRLLQFVQRQPQFA 208

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMP-----DPLWISD 397
             + LL  IE+   + T    Y    A  A       DP WI D
Sbjct: 209 PAWGLLISIEERLGNETAVAEYKL-RAQDAGRQREMPDP-WIDD 250


>gi|186683043|ref|YP_001866239.1| hypothetical protein Npun_F2761 [Nostoc punctiforme PCC 73102]
 gi|186465495|gb|ACC81296.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 327

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 43/144 (29%), Gaps = 14/144 (9%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD- 182
           +L  Q          A +    +L        A+  +           +A     + L  
Sbjct: 156 VLLAQAKQQIGDREGAAQAYRAILSTKPGDLKALQGMVALLISQQRPEAAIGLLQETLSK 215

Query: 183 ------ISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                 I P +      + ++   +   K +++A +  +Q  K   +  R     ++A++
Sbjct: 216 AAQVNTIQPGSVDTVAVQVLLGSVHASQKRYAQASSVYDQAIKRDPKDFRP----VVAKA 271

Query: 234 LENADKGDMIASYHDAIESLKLCD 257
           +    +G    +      +  L  
Sbjct: 272 MLLKQQGKDADAKPLFDSAAALAP 295


>gi|241176305|ref|XP_002399529.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
 gi|215495156|gb|EEC04797.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
          Length = 1095

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 85/286 (29%), Gaps = 22/286 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +   +    V L          +   A    E  L
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAEVRLGMGHCFYRLGKQEKARAAFERAL 224

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQ---RYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +      A+  L      +    + +   +  ++A  + P  P V   +   +   K++
Sbjct: 225 ALDPQCVGALAGLAVLQLNLKGPEATRTGVQMLSRAYAVDPSCPVVLNQLANHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263
              +  L     +  E    RA      +     + D   ++    ++ +      ++  
Sbjct: 285 -GKVQHLALHAFHNTENEAMRAESCYQLARSFHVQEDFDQAFQYYYQATQFAPTSFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317
               +  I +     A    EK+ K  P        + ++Y +  S++   + K    ++
Sbjct: 344 FGLGQMYIFRGDVDNAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDQAKTHLKKV 403

Query: 318 EEINKESVESLVIVS--------KIALEMGSIDQAHAKAMLAMKIA 355
            E   E VE+ + ++        + AL       A       +K  
Sbjct: 404 TEQFPEDVEAWIELAQILEQSDVQAALSA--YGTATRLLQDKVKAD 447


>gi|134079877|emb|CAK41009.1| unnamed protein product [Aspergillus niger]
          Length = 629

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 12/146 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A E     L    T +         + +  D       A K   + P        
Sbjct: 346 GDLTQAIEYYHKSLTEHRTPDVLTK--LRNAEKAKDK------AEKEAYVDPAEAEKARE 397

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + Q+     +W  A+    +  K A +  R        R+           +  D  E+ 
Sbjct: 398 LGQKKFQEADWPGAVEAFTEMVKRAPQDPRG----FSNRAAALIKLMAFPQAVQDCDEAT 453

Query: 254 KLCDNSIMASICAAKSLISQNKKRKA 279
           K     I A +  A++LI+  +  KA
Sbjct: 454 KRDPKFIRAYMRKAQALIAMKEYNKA 479


>gi|60682246|ref|YP_212390.1| hypothetical protein BF2774 [Bacteroides fragilis NCTC 9343]
 gi|253564693|ref|ZP_04842149.1| TPR domain-containing protein [Bacteroides sp. 3_2_5]
 gi|265766330|ref|ZP_06094371.1| TPR domain-containing protein [Bacteroides sp. 2_1_16]
 gi|60493680|emb|CAH08469.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251946158|gb|EES86535.1| TPR domain-containing protein [Bacteroides sp. 3_2_5]
 gi|263253998|gb|EEZ25463.1| TPR domain-containing protein [Bacteroides sp. 2_1_16]
          Length = 478

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             A     K +D +P  P  WV  A  +     K++ +AI   +      +E+    A +
Sbjct: 188 EQAIVVFNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAIESCDFAIAADEEFG--EAHI 243

Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNS----IMASICAAKSLISQNKK-RKAEVI 282
           + A SL + +  +  I  Y  A++   L        I  +    ++    N+    A   
Sbjct: 244 IKAHSLFHLENIEGAIVEYRKALKYKTLSPEFTYMFIGLAYTQQENWAEANESYSMALRA 303

Query: 283 LEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEE-INKESVESLVIVSKIALE 337
           +E+       P +++IY++       +    +  R  RL + +  +  E  ++  +I +E
Sbjct: 304 IEEN-GNGSSPLLSDIYSNKALCASRQGDSEEAHRLCRLAKELAPQDAEPYLLEGRIYME 362

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362
             + D A A+  LA++ AP  + ++
Sbjct: 363 EDNFDLARAEWALALRYAPEADTWM 387


>gi|312173204|emb|CBX81459.1| Uncharacterized protein HI0366 precursor [Erwinia amylovora ATCC
           BAA-2158]
          Length = 243

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 56/163 (34%), Gaps = 5/163 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L+    + A   L+  L           ++     + GD + A+++  +AL  +P   
Sbjct: 36  AYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQHYHRALAQAPQNG 95

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           +V            ++  A    +  ++++    R  ++          + G    +   
Sbjct: 96  YVLNNYGAFLCGLGQYDAAERQFSLAREDSVSGLRADSVENSGYC--FLNAGQPDKARKA 153

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290
            +++++            A++     K R++   +L  +++ N
Sbjct: 154 LVDAVQTDP--AKGLPMLAEAERRLGKGRRSESRLLLDVYQHN 194



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 28/167 (16%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              R    I   L     G+M A+  +   +L          +  A+       + +AE 
Sbjct: 23  RHVRVETRIQLGLAYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQ 82

Query: 282 ILEKIWKVNPHPEIANI----YT---------HLLSENTVGK---LKRALRLEEINKESV 325
                   + H  +A      Y           L   +   +   L R   +  +  +SV
Sbjct: 83  --------HYHRALAQAPQNGYVLNNYGAFLCGLGQYDAAERQFSLAREDSVSGLRADSV 134

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           E+        L  G  D+A    + A++  P  +   +LA+ E+   
Sbjct: 135 ENS---GYCFLNAGQPDKARKALVDAVQTDP-AKGLPMLAEAERRLG 177


>gi|291230706|ref|XP_002735306.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 955

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 25/169 (14%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVIL--SILYFFLFAWILLF 59
           +RL      +  +I   + V+ +            Y   P  +   ++L   +  W+++F
Sbjct: 100 VRLAVLVVELVWLIFGLVWVADH------------YNVCPAGMAKRTVLGIVVCNWVVMF 147

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +                K   DK  +A+   +         + R+M    +     +  
Sbjct: 148 TLFWILWCTFDRAGRSWVKLKRDKKQEAIKRSM-------SRVERRMSRAKNIMLLANTS 200

Query: 120 YLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRI 167
            L   L   +A A         E    +  +P+     +  L  E  + 
Sbjct: 201 PLNVALS--LANAFGDVARLFSEFFHELDVVPSDIIAGLL-LLREEQKR 246


>gi|291060017|gb|ADD72752.1| TPR domain-containing protein [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 658

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 87/278 (31%), Gaps = 24/278 (8%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +    +  AR +   +  ++    +    L   +I +++ + + A    +  L+  A   
Sbjct: 100 VGQGELDQARSLFEEILARYPNDVDARFGL--AEIEVSKGRLSSARLLYQAALERQAENR 157

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+ SL   S   G    A  Y  +AL    D   V         L   +  A  +L + 
Sbjct: 158 KALLSLALISYEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERA 217

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                 + R RA+L    S     +G    +     + ++     + A      SL+   
Sbjct: 218 LHIKSAYPRARALL----SAVLYARGAYERAVAQCDQRIRADRTQVDAWYVKTLSLLKLG 273

Query: 275 KKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENTVGKLKRALRLEEINKESVESL 328
           K  +A    +    V+P  ++           HL  E+        ++L   + +  +  
Sbjct: 274 KHTEALATAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYR-----MQLARFHTQKADG- 327

Query: 329 VIVSKIALEMGSIDQAHAKAM----LAMKIAPRKEIFL 362
              ++  +   ++D+                    + L
Sbjct: 328 --FARRNMSRQALDEYRRALKVYPYDGAAREAYARLLL 363



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 37/251 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             + A  +  ++ A E  +  L+  A+   A   L      +G+ + A  +  KA  +  
Sbjct: 27  AGRKAHVQEDWHAAIEFYQEALKKNASYNLAYRGLAECFYALGEYDQALHHVRKAQKLM- 85

Query: 186 DAPWVTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                 +  +++          E  +A +   +           R       +     KG
Sbjct: 86  ----AQDLSLEKLCAFSLVGQGELDQARSLFEEILARYPNDVDAR----FGLAEIEVSKG 137

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---- 296
            + ++      +L+    +  A +  A          +A   +E+   +  H + A    
Sbjct: 138 RLSSARLLYQAALERQAENRKALLSLALISYEAGHYPRALTYVERA--LQYHGDNAQVHF 195

Query: 297 -NIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEM-----GSIDQAHAK 347
              Y   L    E+    L+RAL         ++S    ++  L       G+ ++A A+
Sbjct: 196 FAAYLATLRAHYEDAERYLERAL--------HIKSAYPRARALLSAVLYARGAYERAVAQ 247

Query: 348 AMLAMKIAPRK 358
               ++    +
Sbjct: 248 CDQRIRADRTQ 258



 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 93/278 (33%), Gaps = 28/278 (10%)

Query: 84  GYKALYTGLMSIAAHNIPL--ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
            Y+ L     ++  ++  L   RK    ++Q  +         L     + + + + A  
Sbjct: 57  AYRGLAECFYALGEYDQALHHVRKAQKLMAQDLSLEK------LCAFSLVGQGELDQARS 110

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-- 199
             E +L        A + L       G L+SA+     AL+         +A++   +  
Sbjct: 111 LFEEILARYPNDVDARFGLAEIEVSKGRLSSARLLYQAALE---RQAENRKALLSLALIS 167

Query: 200 -LAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             A  + RA+T++ +  + +      +     +A    + +  +        I+S     
Sbjct: 168 YEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERALHIKSAYPRA 227

Query: 258 NSIMASICAAKSLISQ-----NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            ++++++  A+    +     +++ +A+      W V          + L        L 
Sbjct: 228 RALLSAVLYARGAYERAVAQCDQRIRADRTQVDAWYV-------KTLSLLKLGKHTEALA 280

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSI-DQAHAKAM 349
            A     ++       +++ +IA+      D+   +  
Sbjct: 281 TAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYRMQLA 318


>gi|195113545|ref|XP_002001328.1| GI22034 [Drosophila mojavensis]
 gi|193917922|gb|EDW16789.1| GI22034 [Drosophila mojavensis]
          Length = 708

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 10/134 (7%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            ++A      + A       +Q      +    + +LY E    G L +A++Y   AL  
Sbjct: 453 ARLATDNGNSSRAFHHYLKAVQLYPEYESALMNLGNLYRE---YGQLETAEKYIRAALAA 509

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P  P     +       K++ +A+    Q  K   ++    A+          ++    
Sbjct: 510 YPAFPVAWMNLGIVQSAQKKYDQALDSYRQALKYRSDY----AVCYYNMGNLFLEQHQYG 565

Query: 244 ASYHDAIESLKLCD 257
            + H    ++ +  
Sbjct: 566 EALHHWQHAVAINP 579


>gi|171779263|ref|ZP_02920234.1| hypothetical protein STRINF_01111 [Streptococcus infantarius
          subsp. infantarius ATCC BAA-102]
 gi|171282319|gb|EDT47746.1| hypothetical protein STRINF_01111 [Streptococcus infantarius
          subsp. infantarius ATCC BAA-102]
          Length = 174

 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 2  LRLIRYFFVISLVICSFIIVS------HYPEDVSITWGNRLYRTSPFVILSILYFFLFAW 55
          +++I Y  ++ +++  F I +      ++    ++ +G +  + S ++ + +L   +  +
Sbjct: 13 VKIICYLSIVGMILMGFGIFAVFFAGQNHGGLFTLDYGYQRVQVSVWIPIVVLIMAMIIF 72

Query: 56 ILLFAVSRFF 65
           LLF + R  
Sbjct: 73 YLLFRIMRAL 82


>gi|330825813|ref|YP_004389116.1| tetratricopeptide repeat-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329311185|gb|AEB85600.1| tetratricopeptide repeat protein [Alicycliphilus denitrificans
           K601]
          Length = 385

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 65/148 (43%), Gaps = 6/148 (4%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +YN A    E +L         RE A ++L  +  + G L+ A+  A + L+ +P    
Sbjct: 85  GEYNRAVRVHEHLLSRGDLSRTDRERAQHALALDFLKAGLLDRAED-ALRRLEGTPFEAQ 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y  +++W++A     + +   + +++  +A  L  ++L  A +G++ A+   
Sbjct: 144 ARMALLAIYERSRDWAQASDIAQRMQAAQQGDFSTRQAHYLCEQALPLAARGELQAAQAL 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKK 276
             +++     +  A I  A+      + 
Sbjct: 204 LEQAVATAPQAPRARIEMARLQQRMGRP 231


>gi|320103243|ref|YP_004178834.1| hypothetical protein Isop_1701 [Isosphaera pallida ATCC 43644]
 gi|319750525|gb|ADV62285.1| hypothetical protein Isop_1701 [Isosphaera pallida ATCC 43644]
          Length = 341

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 3/134 (2%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           ++ ILL  +++   ++G+  A+ H    S+ +        +  A+    Q  +R+A    
Sbjct: 181 HQPILLDLKAVAALERGEFDAAQHAWNASIAVDPRRATPWLLRARWARRQGDERQAAECF 240

Query: 284 EKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           EK   + P  P +   Y         G+L+ A  L    ++  E  +I   +       +
Sbjct: 241 EKARSLRPDEPILLREYAGFERG--RGRLQHAAALLARAQKVAEGRMIQGGMGAVEDRPE 298

Query: 343 QAHAKAMLAMKIAP 356
           +  +   + ++  P
Sbjct: 299 RPRSILPIEVEAPP 312



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 4/105 (3%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQ 174
            ++ ++  L+   AL   +++ A       + +   R     +      + R GD   A 
Sbjct: 180 DHQPILLDLKAVAALERGEFDAAQHAWNASIAVDPRRATPWLLR--ARWARRQGDERQAA 237

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
               KA  + PD P +                A   L + +K A+
Sbjct: 238 ECFEKARSLRPDEPILLREYAGFERGRGRLQHAAALLARAQKVAE 282


>gi|311277544|ref|YP_003939775.1| cellulose synthase operon C domain-containing protein [Enterobacter
           cloacae SCF1]
 gi|308746739|gb|ADO46491.1| cellulose synthase operon C domain protein [Enterobacter cloacae
           SCF1]
          Length = 1164

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 86/282 (30%), Gaps = 57/282 (20%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY----- 136
           D G++A   GL ++ A     A          +   +E +  L   Q             
Sbjct: 268 DPGFRAKAEGLAAVDAGQGGKAVSELQQAVNSNHNDSEAVGAL--GQAYSQRGDRARAVA 325

Query: 137 -------------------------------------------NIAHEKLEMMLQIPATR 153
                                                      + A        ++  T 
Sbjct: 326 QFEKAIAMDPQSPNRSKWDSLLKTNRYWLLIKQGDEALKANNPDQAQRYYSQAQRVDNTD 385

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRA-ITFL 211
            +AV  L   +    D  +A+RY T+AL +          +       + E + A I  L
Sbjct: 386 SYAVLGLGDVAAARKDNATAERYYTQALRMDRGNSNAVRGLANVYRAQSPEKATAFINSL 445

Query: 212 NQKKKNAKEWNRNRAIL---LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
           +  ++ + + +  R++    L  ++    ++G    +       L L  +S+  +   AK
Sbjct: 446 SASQRRSID-DIERSLTNERLSQQAEALENQGRWAQAADVQRRRLALDPDSVWVTYRLAK 504

Query: 269 SLISQNKKRKAEVI-LEKIWKVNPHPEIANIYTHLLSENTVG 309
            L +  ++ +A+ + L    K +  P+    Y   LS N   
Sbjct: 505 DLSAAGQRTEADNLMLALARKKSGDPDQVYAYALYLSGNNQD 546



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 100/320 (31%), Gaps = 34/320 (10%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHE 141
           Y  L  G ++ A  +   A + ++   +    ++     L  +   Q       +  +  
Sbjct: 387 YAVLGLGDVAAARKDNATAERYYTQALRMDRGNSNAVRGLANVYRAQSPEKATAFINSLS 446

Query: 142 KLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
             +        R      L  ++      G    A     + L + PD+ WVT  + +  
Sbjct: 447 ASQRRSIDDIERSLTNERLSQQAEALENQGRWAQAADVQRRRLALDPDSVWVTYRLAKDL 506

Query: 199 VLAKEWSRA---ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-- 253
             A + + A   +  L +KK    +     A+ L   + + A    + A       S   
Sbjct: 507 SAAGQRTEADNLMLALARKKSGDPDQVYAYALYLSGNNQDLAALSHLNALPRSQWNSNIQ 566

Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTV 308
           +L D      +   A  L     + +A  +L++     P P    ++          +T 
Sbjct: 567 ELADRLQAGQVLQQANLLHDSGHEAQAIALLKQ----QP-PSTRYDLTLADWAQQRGDTQ 621

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--------EI 360
             +     +   +  + ++ + ++++  E G+   A  +        P           I
Sbjct: 622 TAISEYNAVLAKDAGNDDAHLGLAEVYSEDGNSTTAREQLAKLKAPTPDAPRSINMQRRI 681

Query: 361 FLLLAQIEQANSHNTDKILY 380
            L+ A +      +T +   
Sbjct: 682 ALVYAAL-----GDTAQAEQ 696


>gi|158337251|ref|YP_001518426.1| Slt family transglycosylase [Acaryochloris marina MBIC11017]
 gi|158307492|gb|ABW29109.1| transglycosylase, SLT family [Acaryochloris marina MBIC11017]
          Length = 722

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 24/195 (12%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIG 168
                             +      +   A    + M+   P  +E  + +L   +    
Sbjct: 251 ALAYAQAPQTSQTAYRGARGLQLGGEKKQARAAYQKMIAAYPQAKETPL-ALSKLASLEP 309

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---- 224
           DL  A ++  +A  +S D     +  +   +L +     I  L + K+ +  + +     
Sbjct: 310 DLGKAAQHYDRAFQLSKD----QQPTLAAQILGER----IQRLKKAKQLSSTFEKTLLQQ 361

Query: 225 ------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKK 276
                  A L   ++ +    G++  +   A+E  K   NS  A  ++  A    S  ++
Sbjct: 362 FSDSNDAATLRWQQAEQQRKAGNLAGARKLALEIQKQNPNSPQAATAVFWAGKWASTAEE 421

Query: 277 RKAEVILEKIWKVNP 291
           R+A    + +W+  P
Sbjct: 422 RQAA--FQTLWQTYP 434


>gi|149371674|ref|ZP_01891090.1| Tetratricopeptide TPR_2 repeat protein [unidentified eubacterium
           SCB49]
 gi|149355301|gb|EDM43861.1| Tetratricopeptide TPR_2 repeat protein [unidentified eubacterium
           SCB49]
          Length = 788

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 83/234 (35%), Gaps = 16/234 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             + +  Y+ A +  +  L +  +      +L   +   G+   A++Y  KA+ ++P + 
Sbjct: 465 ALMTKGDYDSAEKYFKEALILTPSYSVLHINLAVLNKAKGNKIEAEKYYKKAMLLAPSSH 524

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                  +  +           L +    +  + + + +L+        +          
Sbjct: 525 RPLFFYGKFLIDEGRVKEGQELLLKGLDISPNFAKAQDLLM----KSYHELNQWEELNTL 580

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303
           A   LK   N    +  A K L     K+  E++LE+  + NP PE    Y ++      
Sbjct: 581 ANTILKSRPN----NKAALKYLDISLNKKTVEIVLEEDIEKNPTPE---KYLNISLMYFN 633

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             N    ++ A +  ++  +  E+   +      +G  D+A      A+KI P 
Sbjct: 634 KGNFKKTIETARKALKLKSDYPEAYNNIGIAYHNLGKNDKAVEAYNKALKIKPD 687


>gi|146412754|ref|XP_001482348.1| hypothetical protein PGUG_05368 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 636

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 53  FAWILLFAVSRFFLSCPAMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSY 109
             W+ +        + P        K      + GY  +  G     A +    + M +Y
Sbjct: 364 VTWLAIGTYYLLVNNLPEA-RKFFSKATLLDPNHGYAWI--GFGHTFAADGEHEQAMSAY 420

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
                 +   +L +L           +++A E L+ + QI AT    +  L        +
Sbjct: 421 AFAARLYPGTHLPHLFLGMQHFLMNNFSLAQEYLQSLYQICATDPLLLNELGVVCFHRNN 480

Query: 170 LNSAQRYATKALDISPDA-----PWVT-EAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222
           L+ AQ Y  +AL  +         W++    +   +  +K+  +A+    Q  +     +
Sbjct: 481 LSRAQAYFEEALAAAKHLNADSKAWISIHTNLGHTFRRSKQLEKALECFQQVLR---LSH 537

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           ++ A +L A  L +   G+   +      SL +  ++ +A+    ++L
Sbjct: 538 KDDASILAAVGLVHLKLGNASMAVESLHNSLAISPSNPIANDLLKRAL 585


>gi|47086921|ref|NP_998455.1| dnaJ homolog subfamily C member 7 [Danio rerio]
 gi|46249719|gb|AAH68391.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [Danio rerio]
          Length = 472

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+        +Y  A      +L++ +T      V  L  Y+E C    ++ A ++  
Sbjct: 164 KVLKADCLALLGRYPEAQSVASDILRMDSTNGDALYVRGLCLYYEDC----IDKAVQFFV 219

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 220 QALRMAPDHEKARLACRNAKALKAKKEEGNKAFKEGSYEEAYELYTEALTIDPNNIKTNA 279

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R+   +    +  +  D  +++KL +  I A +  A+  +   +  +A    EK+
Sbjct: 280 KLYCNRATVGSKLNKLEQAIEDCTKAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDYEKV 339

Query: 287 WKVN 290
           ++  
Sbjct: 340 YQTE 343


>gi|67921673|ref|ZP_00515191.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856785|gb|EAM52026.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 226

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 66/174 (37%), Gaps = 21/174 (12%)

Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           LY ++    + GDL +A     +A++ +P            Y L K+   A+   NQ  K
Sbjct: 42  LYQQALEKVKKGDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIK 101

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E +R        R      +G    +  D  +++ L  + I A +  A  L      
Sbjct: 102 LDPELSRP----YYNRGFLYQREGKPELAVKDYNKTISLNPDYIPAYLNRAVVLSILGDN 157

Query: 277 RKAE----VILEKIWKVNPH-PEI----ANIYTHL-LSENTVGKLKRALRLEEI 320
           + A      ++E     +P+ P++    A  Y+ L   E  +  L++A +L   
Sbjct: 158 QGAIEDYNKVIET----DPNLPQLYFNRAASYSELGNPEKAMEDLEKASQLFAK 207


>gi|294140848|ref|YP_003556826.1| hypothetical protein SVI_2077 [Shewanella violacea DSS12]
 gi|293327317|dbj|BAJ02048.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 386

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 84/269 (31%), Gaps = 32/269 (11%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + +    + ++  P      R+ A+  L  +    G  + A+      +     +  
Sbjct: 83  GEVDRSIRIHQNLIARPSLTNEQRDIAMMELGKDYLAAGFYDRAEEIFINLVQQEDHSED 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y + K+W +AI  +   K+K  +    N A      + E     D+      
Sbjct: 143 AETHLIDIYQVTKDWQQAINIIKSLKRKRQQSLRHNTAHFYCELANE---SSDVDTQLKL 199

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-T 307
              +LK   +   A +  A+  +  ++  K + +L K         + +    L  +  +
Sbjct: 200 LQAALKQDSDCGRALLTQAEKYLDLHEYAKCKALLVK---------LLDADIELFPDALS 250

Query: 308 VGK--------LKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           + +        L     L     ++       + +++  +E G   +A    +  +   P
Sbjct: 251 IARQVFHDSHDLTGYRDLLRQALQNGAGASVAITLAQNMIEQGETQEAEQLVLDGLYRHP 310

Query: 357 RKEIFL-LLAQIEQANSHNTDKILYWTQS 384
             + F  L+            +       
Sbjct: 311 TMKSFQHLMKM--HVQQAEDGQAKESLTM 337


>gi|51597159|ref|YP_071350.1| fimbrial biogenesis protein [Yersinia pseudotuberculosis IP 32953]
 gi|153948563|ref|YP_001400165.1| type IV pilus biogenesis/stability protein PilW [Yersinia
           pseudotuberculosis IP 31758]
 gi|186896254|ref|YP_001873366.1| type IV pilus biogenesis/stability protein PilW [Yersinia
           pseudotuberculosis PB1/+]
 gi|51590441|emb|CAH22081.1| putative fimbrial biogenesis protein [Yersinia pseudotuberculosis
           IP 32953]
 gi|152960058|gb|ABS47519.1| type IV pilus biogenesis/stability protein PilW [Yersinia
           pseudotuberculosis IP 31758]
 gi|186699280|gb|ACC89909.1| type IV pilus biogenesis/stability protein PilW [Yersinia
           pseudotuberculosis PB1/+]
          Length = 249

 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+     A + LE  ++           + F + RIG+ ++A++   +A+
Sbjct: 35  TRLQLGLAYLAQGDLTAARKNLEKAVEADPQDYRTQLGMAFYAQRIGENSAAEQRYQQAM 94

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +             ++              
Sbjct: 95  KLAPGNGTVLNNYGAFLCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYC--FLRANQ 152

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 153 DKQARVLLSRALKYDPDKGEPLLAEAQRYFGEGNRAQAQLLL 194


>gi|297182821|gb|ADI18973.1| hypothetical protein [uncultured delta proteobacterium
           HF0010_10I05]
          Length = 265

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 11/196 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-------ITFLNQKKKN 217
             +G+   A++ + +   ++ + P     + + YV   +W          +         
Sbjct: 27  LEVGEWGIAEQLSHEIDRLAHNHPEALMGLREVYVQRGDWPACVRQERHILELYPDGVIG 86

Query: 218 AKEWNRNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +  +R+   L +A   E     +  +       +++K    S+ A+I  A  L    + 
Sbjct: 87  DQVRSRHEQRLHLAAEQEPELLNNWSMKYLPGGKKAIKHL-YSVSAAISEANHLHQNGQS 145

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKI 334
            KA  +L   ++ N  P + +    L ++  N          LE  +K S+   + +++I
Sbjct: 146 IKAAELLRTSFEQNGTPRLLDELERLYTDTGNNQTIYDMLECLENSSKTSLYVTLTLARI 205

Query: 335 ALEMGSIDQAHAKAML 350
            L  G+ ++A  +   
Sbjct: 206 NLRSGNTEEAQRRLQQ 221


>gi|300868094|ref|ZP_07112731.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300333932|emb|CBN57909.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 558

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 65/195 (33%), Gaps = 16/195 (8%)

Query: 170 LNSAQRYATKALDISP--DAPWV-TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
              A     +A  I P     W    A++      +    A+   ++  +   +      
Sbjct: 327 YQEAIASYDRATKIKPDFHLAWRDRGALLAFLKQDR---EALASFDRALQFKPDDYVAWY 383

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           I     +       D IASY    +++++  +   A     ++L    + + A   L+K 
Sbjct: 384 IRGDLLAGNLQRYEDAIASYD---QAIRIKPDFAPAWTGRGEALYDLRRYQDAIASLDKA 440

Query: 287 WKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +++  P+    +       L  E     +        I  ++ +  ++ +   + +   
Sbjct: 441 IQID--PKQGEAWTLKGTLLLELERYSEAVLAYDLSIAIAPDNYQLWMLRAAALVGLKRE 498

Query: 342 DQAHAKAMLAMKIAP 356
            +A   A  A+K+ P
Sbjct: 499 SEARKSAQQALKLKP 513


>gi|322421649|ref|YP_004200872.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320128036|gb|ADW15596.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18]
          Length = 1442

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 18/187 (9%)

Query: 186  DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-----------AILLIARSL 234
            D+PW     + +     +W   +  + Q         R R           A L      
Sbjct: 873  DSPWYPTMRLFRQGSPGDWEGVLHRVLQALGELVLAKRGRRQVPAPGPMPQAELYNNEGC 932

Query: 235  ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                 G  + +     +++               SL +  +  +A         ++  P 
Sbjct: 933  ALDSAGRQLEALESYRKAIAQSPEFAAPHYNMGNSLYTLGRSAEAIDCYRHALAID--PA 990

Query: 295  IANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            +A  + +L      +      L    R        +E+   + ++   MG +D A A   
Sbjct: 991  LARGWHNLALALKETGEQQQALHALKRAVSAAPGYLEARHNLGELYHAMGELDLAEATFR 1050

Query: 350  LAMKIAP 356
              +   P
Sbjct: 1051 GILAGDP 1057



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 11/165 (6%)

Query: 74  HMLHKRN-----YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
               +R      +D G   L   L++ A      A    +  +Q      E    L   +
Sbjct: 450 RSFLERRLASHPFDGGSHYLCGALLA-ATGRGREATARFTKAAQLLPGQWEPHYAL--AR 506

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 ++  A E LE  + +         +L       GDL  A +   KAL + P   
Sbjct: 507 ALQQMGRFEEAGESLEAAVALEEGLPLLHEALGIVKQVRGDLRGAVQSYQKALSLDPSLI 566

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR---AILLI 230
                +         +++A+    +  + + ++   R   A+LL+
Sbjct: 567 KARYNLATASRDLGRFAQALQEFRELVRRSPDYGDARWNLAVLLL 611


>gi|212693910|ref|ZP_03302038.1| hypothetical protein BACDOR_03432 [Bacteroides dorei DSM 17855]
 gi|212663442|gb|EEB24016.1| hypothetical protein BACDOR_03432 [Bacteroides dorei DSM 17855]
          Length = 316

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 80/268 (29%), Gaps = 49/268 (18%)

Query: 99  NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +   A++M         F      ++E     L         + + A   L+ M      
Sbjct: 32  DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91

Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +     ++  + Y +     D  + +    KAL +    P       +  +  K+   AI
Sbjct: 92  QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L +     +++     +    R+           +  D  + L L  +   A +   +
Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
            L + N+                 PE A                   ++  +N  + ++ 
Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++  ++ L     D+A      A++I P
Sbjct: 233 ILSGELYLANKDFDKALVIYDEAIEINP 260


>gi|75909068|ref|YP_323364.1| hypothetical protein Ava_2856 [Anabaena variabilis ATCC 29413]
 gi|75702793|gb|ABA22469.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 297

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 71/209 (33%), Gaps = 20/209 (9%)

Query: 160 LYFESCRIGD---LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  E+ ++G       A   A  A  ++P    V   +    +  K +  AI  LN+   
Sbjct: 54  LAQEAAQLGQFQQYELALARAKLASQLAPGNDKVWFLLGGLQLQTKNFDGAIASLNR--- 110

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-------NSIMASICAAKS 269
            +K  N   A +L A    N  +     +       L L         +   A     + 
Sbjct: 111 -SKTINPKNADVLFALGSANFQQKKYQVAIEHYQAGLALKPNEADGLFDLGNAYYMIGRL 169

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328
             +  +  KA    +K W     P I NI        N    +KR      I+K++ E L
Sbjct: 170 PDAIAQYNKAVAQDKKFW-----PAINNIGLISYEQGNVDEAIKRWQSAVAIDKQAAEPL 224

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + ++      G   Q  +    A++I PR
Sbjct: 225 LALAVALYTKGDRQQGISLGEAALRIDPR 253


>gi|71000759|ref|XP_755061.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
 gi|66852698|gb|EAL93023.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
          Length = 522

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 59/200 (29%), Gaps = 12/200 (6%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173
            +  L  L+   +  LA      A    +  +    +    +           +G    A
Sbjct: 28  PDTPLASLVASAKAHLASGSARDALLYFDAAVSRDPSNYLTIFQRG--AAYLSLGRTAQA 85

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIA 231
                + L + PD         +      +W  A+    +  K   +  R    A     
Sbjct: 86  LDDFDRVLQLKPDFESALLQRARLRTKTADWDGALHDFERAGKRLSDEYRETQEARDAAF 145

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288
           ++ +   +G        A  ++     S+      A     + +  +    L  + +   
Sbjct: 146 QAFDAEKQGAWDDCVGRANTAISKASTSLSLRQTRAHCRFEKGEVEEGISDLVHVLQLSP 205

Query: 289 --VNPHPEIANIYTHLLSEN 306
             + PH +I+++  + L ++
Sbjct: 206 GLIEPHLQISSMLFYALGDS 225


>gi|297468007|ref|XP_600406.5| PREDICTED: CG4050-like [Bos taurus]
          Length = 903

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 500 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 559

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324
            L+  NK  KA E  L+ +     + ++       H+  +     LK      E+N +  
Sbjct: 560 LLLKMNKPAKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNDALKNFNHALELNPKHK 619

Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
                S +++ +   E+    +A  + +  +   P     +  L  +   +  +++    
Sbjct: 620 LALFNSAILMQESG-EVRLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 677

Query: 381 WTQSALHAMPD 391
           W + A+    D
Sbjct: 678 WMKKAIKLQAD 688


>gi|297474384|ref|XP_002687234.1| PREDICTED: CG4050-like [Bos taurus]
 gi|296487992|gb|DAA30105.1| CG4050-like [Bos taurus]
          Length = 915

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324
            L+  NK  KA E  L+ +     + ++       H+  +     LK      E+N +  
Sbjct: 572 LLLKMNKPAKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNDALKNFNHALELNPKHK 631

Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
                S +++ +   E+    +A  + +  +   P     +  L  +   +  +++    
Sbjct: 632 LALFNSAILMQESG-EVRLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 689

Query: 381 WTQSALHAMPD 391
           W + A+    D
Sbjct: 690 WMKKAIKLQAD 700


>gi|237713817|ref|ZP_04544298.1| TPR-repeat-containing protein [Bacteroides sp. D1]
 gi|262409276|ref|ZP_06085819.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644713|ref|ZP_06722462.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294805926|ref|ZP_06764793.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229446264|gb|EEO52055.1| TPR-repeat-containing protein [Bacteroides sp. D1]
 gi|262352728|gb|EEZ01825.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639976|gb|EFF58245.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294446808|gb|EFG15408.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 272

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 9/169 (5%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  K  +  N   A+L     L     G+   +      +L     ++   +  
Sbjct: 40  AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98

Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321
           A   +   K  +A      +L++  K N    +   Y + L  +    ++    RL E++
Sbjct: 99  AAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
            +S    + ++ +  + G   +A       +   P    +++  A +E+
Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALEILNKMLAATPEDATLYIARADVER 205



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 6/166 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           + L    I +   + + A+    +++ +    +E  +   Y    R  D  +A+    + 
Sbjct: 94  ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L++ P +      +        ++  A+  LN+      E     A L IAR+    +  
Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMLAATPE----DATLYIARADVEREMK 208

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  D  E+++L   S  A +      ++Q KK  A+   EK 
Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254


>gi|254512447|ref|ZP_05124514.1| adenylate cyclase Cya3 [Rhodobacteraceae bacterium KLH11]
 gi|221536158|gb|EEE39146.1| adenylate cyclase Cya3 [Rhodobacteraceae bacterium KLH11]
          Length = 613

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 26/214 (12%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-----------LAKEWSRAITFLN 212
                    A+R+A +A+ + P         +                    + A     
Sbjct: 380 KITKEAHTDARRFAQQAIALDPGYS-APHCTLGFICTVEARHGFVADRRATLAEARDCAQ 438

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  +         AI   A +++    G ++++     E+L L  N    +   + +L  
Sbjct: 439 RALEIDSYNPEAHAIAGFADAID----GKLVSAIEKFNEALALNPNHADVAARLSLTLGF 494

Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVE 326
             + R+A  + ++   +NPH P     Y  +L      +    + K+A        E   
Sbjct: 495 NGQAREAIRVAQQAITLNPHYP---GWYAGVLGLALRLDGQYEEAKKAFTEYGQRVEG-F 550

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
             + +  + +E  ++D A  +A   MK  P+  I
Sbjct: 551 GHLDLVIVHVETENLDAARDEARNVMKFRPQFSI 584


>gi|148259001|ref|YP_001243586.1| TPR domain-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146411174|gb|ABQ39680.1| putative TPR domain protein [Bradyrhizobium sp. BTAi1]
          Length = 648

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 105/327 (32%), Gaps = 45/327 (13%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           + A ++  A               + L  +   Q+ LA ++++ A E     +++  +  
Sbjct: 36  LRAGDLVQAEDSCRRALSLDAGSVDALRAM--GQVCLALKRFDDAIEWFARAIRLDISVP 93

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            ++  L       G L+ A +   + L + PDA    +A+ +       ++ A    ++ 
Sbjct: 94  ESLIGLAEALRSAGRLDDAIKAYDRVLQLRPDAQDCWDALGELLQRTGRYAEAALACDRL 153

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            + A +  R      +   LE  D+ D  A   D  + LK   + + A+  A        
Sbjct: 154 LQLAPD--RATTWFRLGEVLEAQDRRDEAALAFD--QVLKATPDHVDAANKAGAVHFDAG 209

Query: 275 KKRKA--------------EVIL--------------------EKIWKVNPH-PEIANIY 299
           +  +A                +L                    ++   + PH P+IAN Y
Sbjct: 210 RYDEAIARFDRSLAVRPDQAGVLCLKAIALRRLRRYQDAQPCGQRAHVLAPHDPDIANSY 269

Query: 300 THLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +L         +    +   +  ++ E          E+   D+A A    A+ + P 
Sbjct: 270 GCILQNLGRHDEAVAVFDKAIALRPQTAEFYNHRGTSLAELHRFDEAFASFDRAVALKPD 329

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQS 384
                  A + +  + +      W   
Sbjct: 330 LADAHWNAALFRLLTGD--FARGWAAR 354



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 80/243 (32%), Gaps = 28/243 (11%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R GDL  A+    +AL +   +     A+ Q  +  K +  AI +  +  +   + +  
Sbjct: 36  LRAGDLVQAEDSCRRALSLDAGSVDALRAMGQVCLALKRFDDAIEWFARAIR--LDISVP 93

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKSLISQNKKRKAE 280
            +++ +A +L             DAI++          +        + L    +  +A 
Sbjct: 94  ESLIGLAEAL------RSAGRLDDAIKAYDRVLQLRPDAQDCWDALGELLQRTGRYAEAA 147

Query: 281 ----VILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331
                +L+        P+ A  +  L       +          ++ +   + V++    
Sbjct: 148 LACDRLLQLA------PDRATTWFRLGEVLEAQDRRDEAALAFDQVLKATPDHVDAANKA 201

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHAMP 390
             +  + G  D+A A+   ++ + P +   L L  I               Q A + A  
Sbjct: 202 GAVHFDAGRYDEAIARFDRSLAVRPDQAGVLCLKAIALRRLRRYQDAQPCGQRAHVLAPH 261

Query: 391 DPL 393
           DP 
Sbjct: 262 DPD 264


>gi|126347672|emb|CAJ89386.1| putative TPR repeat protein [Streptomyces ambofaciens ATCC 23877]
          Length = 1035

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 82/312 (26%), Gaps = 21/312 (6%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G+     G   + A     A    +     +   +  L             +Y+ A   L
Sbjct: 625 GWALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQ--RGAAHRLAGRYDDAVTDL 682

Query: 144 EMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
              L +                    G    A    T A D++P   WV       + LA
Sbjct: 683 TAALDLAPASAGLLGQRG--EAHLMAGRYEQAVADLTAAHDLNPTDDWVLGQRGAAHRLA 740

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             +  A+T           ++      L +R   +        +  D   +L +   +  
Sbjct: 741 GRYDDAVTDFTAALAIDPAYD----WALASRGAAHRQAERYDQAVTDLTAALAIDPANDW 796

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE--- 318
           A      +     +  +A   L     + P    A  +       +     R  +     
Sbjct: 797 ALAQRGAAHRLAGRYDQAVTDLTAALAITP----AYPWALAQRGESHRLAGRYEQAVTDF 852

Query: 319 ----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
               ++N     +L    +     G  +QA      A+ IAP     L +       + +
Sbjct: 853 TAALDLNPTDDWALASRGQAHQLAGRYEQAVTDFTAAVDIAPTLAWPLGMRGRAHRQAGH 912

Query: 375 TDKILYWTQSAL 386
             +     + A+
Sbjct: 913 YARARADLERAV 924


>gi|18266639|gb|AAL67585.1|AC018929_7 myosin-like protein [Oryza sativa Japonica Group]
 gi|31433673|gb|AAP55157.1| expressed protein [Oryza sativa Japonica Group]
 gi|125575798|gb|EAZ17082.1| hypothetical protein OsJ_32580 [Oryza sativa Japonica Group]
          Length = 943

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 68/241 (28%), Gaps = 37/241 (15%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+ Q+   +     A E    +  I   +   ++ L        D ++AQ  A +ALD
Sbjct: 86  QLLQAQLNAVQEDLKNAREH---LAVIDRDKAQLLHDLSLARRLADDAHAAQSAAEEALD 142

Query: 183 ISP-DAPWVTEAVVQQ-YVLAKEWSR---AITFLNQKKKNAKEWNRNRAILLIARS---L 234
           +    +    +  +       ++W+    AI  L + +  A+       + L   +    
Sbjct: 143 LERFKSIEREQLAIDLAQTKERDWNARCHAID-LRRAELAAELGRVKDELALAVEATNTA 201

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 +   +   A E  +L          A+   AK     +  R             
Sbjct: 202 RQIADANADKAATLAAEVSRLQSELETKAEEATAIVAKLESEASGLRA------------ 249

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAKAM 349
              E+ N       +     + RA +L   +  +   +    +   L             
Sbjct: 250 ---ELQNAEASRKED-----VGRAEQLLHGLKVDIAYAKRAEADANLAAQEWKTKAESLQ 301

Query: 350 L 350
            
Sbjct: 302 A 302


>gi|302382876|ref|YP_003818699.1| hypothetical protein Bresu_1765 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193504|gb|ADL01076.1| tetratricopeptide repeat (TPR) protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 494

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 10/233 (4%)

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN-IPLARKMHSYVSQ 112
           A  LL    R      A L  +        G  A+    ++ A  +    A    +    
Sbjct: 41  ALKLLARALRSLGETAAALPLLERVARRQPG-SAIAEHNLAAALGDAGRQADSEAAARRA 99

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLN 171
                +     L+  +  LA+   + A       L +      AV  L      R GDL+
Sbjct: 100 IAKGGSAPETRLILARALLAQGDLDEAEVWFRRALDLRGDFLPAVRDLSQLVWMRSGDLS 159

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
                      ++                      A+  L    ++        ++ ++ 
Sbjct: 160 RTLAVLEPLKALAESREDAAILRASILRDTAGDDAALASLVPWLESG-------SVEVLL 212

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            +   A   D   +   A  +L        A I  A +L++ ++  +A  +LE
Sbjct: 213 AAAAAASGVDPQRALVHARNALTRAPGDPRAGIALAAALVATDQAPEAATLLE 265


>gi|34496823|ref|NP_901038.1| hypothetical protein CV_1368 [Chromobacterium violaceum ATCC 12472]
 gi|34102678|gb|AAQ59043.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 434

 Score = 44.2 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 41/158 (25%), Gaps = 4/158 (2%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L   Q        + A      +L   A    A + L F   + G L+ A  +  + +  
Sbjct: 9   LRRAQRLHLSGDADGAERAYRALLDDAALGAPAAHWLGFLLMQQGRLDEALAWLERVVAA 68

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                     +            A+  L +  +       +R         +    G   
Sbjct: 69  DDGHAEWHFNLGLVRARLGRSEEAVFALREAARRDP----SRYFYWTNLGAQLMRGGQDA 124

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            +      +  L  +   A     + L+ Q +  +A  
Sbjct: 125 EAEQALRRAASLDPHCPDAFYLLTEMLLRQGRHAEARR 162


>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 406

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 8/171 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKA 180
           +L   + +L + +Y  A ++    +   P   E   Y+ +     +      A     K 
Sbjct: 19  HLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKR--PEKALECYEKI 76

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L  +P                  +  A+    +  K   ++    A     ++L   + G
Sbjct: 77  LKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKY----AGAWNNKALVLKELG 132

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               +     ++L++      A       LI   K +KA    EK  ++NP
Sbjct: 133 RYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNP 183



 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 43/154 (27%), Gaps = 30/154 (19%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE------- 220
           G  + +     KAL I+P                  +  A+    +  +   E       
Sbjct: 234 GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNN 293

Query: 221 --------WNRNRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257
                        A+    ++LE                 D  +   S     ++LKL  
Sbjct: 294 KGLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNP 353

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +        K+L    K ++A    EK  K++P
Sbjct: 354 QNKTLWYMQGKTLQKLGKHKEALKCYEKSLKIDP 387


>gi|283852703|ref|ZP_06369968.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio sp. FW1012B]
 gi|283571881|gb|EFC19876.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio sp. FW1012B]
          Length = 800

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 5/155 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                AR       + +  H   L+ L   ++A   R+++ A +  +            +
Sbjct: 648 GENAAARSAFQKCLRANPGHVYSLLRL--GRMAEESRRFDAALKYYKRAAGAKNGPALTL 705

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L   + + G L+ A+ +  +AL   P   +    + + Y+   +   AI     ++  
Sbjct: 706 RHLARLAFKRGRLDEAREHLHQALLHDPKDAFSLHLMARLYLEEGQ-DPAIAEAMARQAV 764

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A   +R      +AR+L    +G    S      +
Sbjct: 765 ALRPDRGEFWKELARALSV--QGKADESREALARA 797



 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 63/204 (30%), Gaps = 23/204 (11%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A  +   ++   A    A+Y+L     R+G+  +A+    K L  +P   +    
Sbjct: 614 GRLPQARAEFTQVIGRDAKNTMALYNLGCVCRRLGENAAARSAFQKCLRANPGHVYSLLR 673

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + +    ++ +  A+ +     K A       A+ L   +     +G +  +     ++L
Sbjct: 674 LGRMAEESRRFDAALKY----YKRAAGAKNGPALTLRHLARLAFKRGRLDEAREHLHQAL 729

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                   +    A+  + + +                 P IA             + + 
Sbjct: 730 LHDPKDAFSLHLMARLYLEEGQD----------------PAIAEAMARQAVALRPDRGEF 773

Query: 314 ALRLEEINK---ESVESLVIVSKI 334
              L        ++ ES   +++ 
Sbjct: 774 WKELARALSVQGKADESREALARA 797



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 16/135 (11%)

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKE 323
               +   A    +K  + NP     ++Y+ L       + +R         R       
Sbjct: 645 RRLGENAAARSAFQKCLRANP----GHVYSLLRLGRMAEESRRFDAALKYYKRAAGAKNG 700

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWT 382
              +L  ++++A + G +D+A      A+   P       L+A++      +        
Sbjct: 701 PALTLRHLARLAFKRGRLDEAREHLHQALLHDPKDAFSLHLMARLYLEEGQDPAIAEA-M 759

Query: 383 QS---ALHAMPDPLW 394
                AL       W
Sbjct: 760 ARQAVALRPDRGEFW 774


>gi|238026511|ref|YP_002910742.1| TPR domain-containing protein [Burkholderia glumae BGR1]
 gi|237875705|gb|ACR28038.1| TPR domain protein [Burkholderia glumae BGR1]
          Length = 616

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 70/257 (27%), Gaps = 13/257 (5%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 +  L +        A+ ++  A    E  L++         +L      +G  +
Sbjct: 95  ALSLAPDFPLAHYNLGNAYAAQARHEDAAAAFERALRLTPGDASIHNNLGNALNALGRHD 154

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A     +AL++ P        +            AI            +          
Sbjct: 155 DALAAFRRALELRPGHAGAHNNLGMALSALGRVDEAIDHFRAALAAEPRF----VAAHFN 210

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                   G    + H    +L L     +A +    +L +  +  +A    E+   ++P
Sbjct: 211 LGNTLDAVGRHAEAIHAFERALALHPALPVALLGLGNALAALGRHAEARARYERAIGLDP 270

Query: 292 H--P---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI--DQA 344
              P    +   +  L +      L+   +   +  +   + +  +   L +G       
Sbjct: 271 SLVPGWLNLGTAHHALGAHELA--LRAFDQALRLAPDHTLARMHRAVTLLTLGDFARGLP 328

Query: 345 HAKAMLAMKIAPRKEIF 361
             +A  A+  AP     
Sbjct: 329 DYEARHALPGAPDAGGL 345


>gi|147790353|emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]
          Length = 629

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 71/230 (30%), Gaps = 20/230 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            NI  AR + +   +     NEY+   + LLE +      ++  A    +   +      
Sbjct: 262 GNIKKARHLLAKGLKY-GGGNEYIYQTLXLLEAKA----NRHEQARYLFKQATKCNPKSC 316

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFLN 212
            +  +      +  + ++A++   KA+  SP   +      V +  +   +       + 
Sbjct: 317 ASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFAWHVWGVFEANLGNAD-------VG 369

Query: 213 QK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +K  K     N    +LL + +L          S      + +L        I       
Sbjct: 370 RKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRRASELDPRHQPVWIAWGWMEW 429

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE 319
            +     A  + ++   ++   E A          E   G L  A RL  
Sbjct: 430 KEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAGNLSAARRLFR 479


>gi|114570515|ref|YP_757195.1| hypothetical protein Mmar10_1965 [Maricaulis maris MCS10]
 gi|114340977|gb|ABI66257.1| Tetratricopeptide TPR_2 repeat protein [Maricaulis maris MCS10]
          Length = 595

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 7/137 (5%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            +   L  R+++++ +GD + +   A ++  L  +  + +      L +  +  +A    
Sbjct: 53  QKVAALAKRAMKSSAEGDNVGAARLAHKAYLLAPDMALTNHVLGLMLYNLGRLSRALDFF 112

Query: 284 EKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRL-EEINKESVESLVIVSKIALEM 338
           E  WK++  P  A IY  L       N +   ++  RL  ++   +V++ + +  +  + 
Sbjct: 113 EVAWKID--PSDAEIYQKLGLVAWKLNMLEAAEKFYRLQYKLAPAAVDAAINLGGVLRDA 170

Query: 339 GSIDQAHAKAMLAMKIA 355
           G  ++A      A+   
Sbjct: 171 GKFEEAIEILRTAIYAH 187



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 28/232 (12%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRN 224
             GD   A R A KA  ++PD       +          SRA+ F     K +  +    
Sbjct: 67  AEGDNVGAARLAHKAYLLAPDMALTNHVLGLMLYNLGRLSRALDFFEVAWKIDPSDAEIY 126

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           + + L+A  L   +  +            KL   ++ A+I     L    K  +A  IL 
Sbjct: 127 QKLGLVAWKLNMLEAAEKFYRLQY-----KLAPAAVDAAINLGGVLRDAGKFEEAIEILR 181

Query: 285 KIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIA--- 335
               +  H +   ++  +        E    +      L  +  +   +   ++ I    
Sbjct: 182 TA--IYAHQDDYELWNSMGTVLSDKGEPEEARTFYLEAL-RLKPDYGRAHNNMANIHELL 238

Query: 336 ----LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
               L +   D+A      AM+ A        +A +             W  
Sbjct: 239 GQPLLALPHYDEALKDPADAMEEA-TMRHGRSMALLSAG-----RLAEGWAA 284


>gi|83815162|ref|YP_445705.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83756556|gb|ABC44669.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
          Length = 1064

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 18/214 (8%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  +A     +A      AP       +  +   + +     L++ ++      R R   
Sbjct: 110 DAATAFATFRQAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTAR 169

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNS----IMASICAAKSLISQNKKRKAEVILE 284
           L   +    D+G+   +    ++++    +       A     ++  +Q     A    +
Sbjct: 170 L-GLAQYYLDQGNPDRAKSQ-LQTIATAPSRPDEGAQALYLLGRTEQNQGNPNAALPYFK 227

Query: 285 KIWKVNPHPEI--ANIYTHLLSENTVGKLKR----ALRLEEINKESVESLVI---VSKIA 335
           +++   P+ E+  A +Y   +++  + +  R      RL E   +S  S  +   + ++ 
Sbjct: 228 QVYSRYPNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVY 287

Query: 336 LEMGSIDQAHAKAM---LAMKIAPRKEIFLLLAQ 366
             +G  + A  +       +  + R     LL +
Sbjct: 288 YRVGQYENAATELQRRLPDLTGSTRARTLFLLGE 321


>gi|91976998|ref|YP_569657.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
 gi|91683454|gb|ABE39756.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
          Length = 784

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 8/146 (5%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
              P  R      L     + G +  A+     AL  SP        +   Y        
Sbjct: 592 ADRPEARSALGRFL----LQRGQVTEAETEYKAALRFSPAYAPAAVNLADLYRQGGREPE 647

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
             + L      A       A L     L          +  +  ++ +L  +    +   
Sbjct: 648 GESVLRTALIAAP----RDAELHHVLGLTLVRLKRYDEAIAELRQATELEPDRARFAYVY 703

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH 292
           A +L S  +   A  IL++I   +PH
Sbjct: 704 AVALHSAGRMADAISILKQIAARHPH 729



 Score = 43.4 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 17/170 (10%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           S A  F+  ++ NA       A+           +G +  +  +   +L+       A++
Sbjct: 579 SAAEEFVAAQRLNADRPEARSAL-----GRFLLQRGQVTEAETEYKAALRFSPAYAPAAV 633

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRL 317
             A       ++ + E +L       P     +   H +   T+ +LKR         + 
Sbjct: 634 NLADLYRQGGREPEGESVLRTALIAAPR----DAELHHVLGLTLVRLKRYDEAIAELRQA 689

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            E+  +      + +      G +  A +         P      ++A I
Sbjct: 690 TELEPDRARFAYVYAVALHSAGRMADAISILKQIAARHPHDRD-TMMAVI 738


>gi|313497134|gb|ADR58500.1| Response regulator/TPR domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 577

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 21/174 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184
             Q A A+  Y  A +   +M          +Y    E     GD   AQ    +A+ +S
Sbjct: 253 RGQNAQAQGVYEQALKAFPIMP--------GLYDGMAEVLVAQGDTRRAQNLLEEAVRLS 304

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--------ILLIARSLEN 236
           P +      + +  +  +++  A           +      A         L+   +   
Sbjct: 305 PLSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFG 364

Query: 237 ADKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKI 286
            D    +       E  K         + A +  A SL        A  + E+ 
Sbjct: 365 LDARTRVEINTTLSEVAKENPEDQGLQVRARMMKAASLQQAGDPETAGKLTEQA 418


>gi|294085271|ref|YP_003552031.1| tetratricopeptide repeat family protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664846|gb|ADE39947.1| Tetratricopeptide TPR_2 [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 560

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 91/260 (35%), Gaps = 28/260 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           Y+L  QI  A +    A E L   +   P      +  L   +   G++  A+ +  +AL
Sbjct: 176 YILRGQIYAALKDNERALETLNHAITIEPENDFALMR-LGVINYNAGNVEQAEYHLDEAL 234

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            I+ ++ W            +E+ ++    ++       ++   A   +  +   A K D
Sbjct: 235 SINSNSKWALLWKGVIASDGREFEKSKRHFSEALDIDPRFD--MAHYNLGWAYLGAKKKD 292

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVI---LEKIWKVNP 291
              +     ++L L  +   A          QN+         KA  I       WK   
Sbjct: 293 YENAEKSFRKALSLNPDFKEAFYGLGMVFGYQNQYSVSKEYLSKAIDIDDRFFTAWK--- 349

Query: 292 HPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                  +  ++++        L        IN  + +  +  ++++L+  + D++    
Sbjct: 350 -------WRGIVNDELGLYDQALTDFSSAISINPSNSDIYMRRARVSLKTEAYDESLVDL 402

Query: 349 MLAMKIAP-RKEIFLLLAQI 367
           +LA K  P    I+L L Q+
Sbjct: 403 LLAKKYNPKNARIYLYLGQL 422


>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 600

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 41/148 (27%), Gaps = 8/148 (5%)

Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                A     + +   P          L      +GD   A     +A+ I+PD     
Sbjct: 427 GDDQGALADYNQAIQINPDLAAAYNNRGLAR--SDLGDYQEAIADFNQAIKINPDDADAY 484

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                      ++  AI    Q  K         A     R    +D GD   +  D  +
Sbjct: 485 YNRGNARSNLGDYQGAIADFTQAIKINP----GDADAYYNRGNARSDLGDYQGAIADYNQ 540

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++KL  +   A      +      K KA
Sbjct: 541 AIKLNPDYAAAYGNRGLAYRDLGDKPKA 568



 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 86/298 (28%), Gaps = 17/298 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
            GL      +   A  +  +        ++   Y            Y  A     + +  
Sbjct: 147 RGLARSNLGDYEEA--IADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKI 204

Query: 149 IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            P     +           + D   A    T+A+ ++PD               +++  A
Sbjct: 205 NPDYADAYNNRG--NARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGA 262

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I   NQ  +   ++    A     R +  +D  D   +  D  +++++  +   A     
Sbjct: 263 IADFNQAIQINPDF----AYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRG 318

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINK 322
            +       + A     +  ++N  P+ A  Y           +    +    +  ++N 
Sbjct: 319 NARSDLGDDQGAIADFNQAIQLN--PDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNP 376

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           +   +         ++G    A A    A++I P          + ++N  +    L 
Sbjct: 377 DDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALA 434



 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 11/195 (5%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A     +A+ ++PD                +   AI   NQ  +   +     A 
Sbjct: 359 GDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDL----AA 414

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               R L  ++ GD   +  D  +++++  +   A      +       ++A     +  
Sbjct: 415 AYNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAI 474

Query: 288 KVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K+N  P+ A+ Y           +  G +    +  +IN    ++         ++G   
Sbjct: 475 KIN--PDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQ 532

Query: 343 QAHAKAMLAMKIAPR 357
            A A    A+K+ P 
Sbjct: 533 GAIADYNQAIKLNPD 547



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               GD   A     +AL +SP+   V       Y   + +  AI   NQ  K   ++  
Sbjct: 49  KAEKGDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINPDY-- 106

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             AI    R L  ++ GD   +  D  ++++L  +   A     + L   N     E I 
Sbjct: 107 --AIAYYNRGLARSNLGDYQGAIADYTQAIQLNPD--DAIAYNNRGLARSNLGDYEEAIA 162

Query: 284 EKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +    +  +P+ A  Y           +  G +    +  +IN +  ++          +
Sbjct: 163 DFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNL 222

Query: 339 GSIDQAHAKAMLAMKIAPR 357
                A A    A+++ P 
Sbjct: 223 EDYQGAIADYTQAIQLNPD 241



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 77/262 (29%), Gaps = 45/262 (17%)

Query: 135 QYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            Y  A         L     + ++          + D   A     +A+ I+PD  +   
Sbjct: 224 DYQGAIADYTQAIQLNPDDAKAYSNRGAAR--SDLEDYQGAIADFNQAIQINPDFAYAYN 281

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                    +++  AI   NQ  +   ++    A     R    +D GD   +  D  ++
Sbjct: 282 NRGVARSDLEDYQGAIADFNQAIQINPDY----ANAYYNRGNARSDLGDDQGAIADFNQA 337

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------------------- 291
           ++L  +   A      +  +     +A     +  ++NP                     
Sbjct: 338 IQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQG 397

Query: 292 -----------HPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
                      +P++A  Y           +  G L    +  +IN +   +        
Sbjct: 398 AIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLAR 457

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
            ++G   +A A    A+KI P 
Sbjct: 458 SDLGDYQEAIADFNQAIKINPD 479



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             Y  A       +Q+      A     L      +GD   A     +A+ I+PD     
Sbjct: 359 GDYEEAIADFAQAIQLNPDDATAYYNRGLAR--SDLGDDQGAIADYNQAIQINPDLAAAY 416

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                      +   A+   NQ  +   +     A     R L  +D GD   +  D  +
Sbjct: 417 NNRGLARSNLGDDQGALADYNQAIQINPDL----AAAYNNRGLARSDLGDYQEAIADFNQ 472

Query: 252 SLKLCDNSIMASICAAKSLISQNKKR 277
           ++K+  +        A +  ++   R
Sbjct: 473 AIKINPD-------DADAYYNRGNAR 491



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 4/122 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A       ++I      A Y+       +GD   A    T+A+ I+P        
Sbjct: 461 GDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYN 520

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    ++  AI   NQ  K   ++    A     R L   D GD   +  D  ++ 
Sbjct: 521 RGNARSDLGDYQGAIADYNQAIKLNPDY----AAAYGNRGLAYRDLGDKPKALEDFRQAA 576

Query: 254 KL 255
            L
Sbjct: 577 TL 578


>gi|162448875|ref|YP_001611242.1| hypothetical protein sce0605 [Sorangium cellulosum 'So ce 56']
 gi|161159457|emb|CAN90762.1| Hypothetical protein sce0605 [Sorangium cellulosum 'So ce 56']
          Length = 1450

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 15/243 (6%)

Query: 124  LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +L  +I LA R    A    +    +  +    +Y L       GD   A+  A  AL+ 
Sbjct: 804  VLAAEIELAARDAPKAIAAWQHASGLQKSART-LYGLARAQILAGDTAGAEASARGALEA 862

Query: 184  SPDAPWVTEAVVQQYVLA-KEWSRAITFLNQ------KKKNAKEWNRNRAILLIARSLEN 236
            SPD       +             A+  L +       +  A +     A  L+     +
Sbjct: 863  SPDHVGARTLIASLLWQTPGREQEALDLLGKVTGEGPTRAAASDPEIVDAYTLLGT--IH 920

Query: 237  ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              +  M A+      ++KL   ++ A I   + L    +  +A+   E   + +    +A
Sbjct: 921  LARSRMSAAEQAFAAAVKLDPQAVRALIGNGEVLYRSGRYSEAQARFEAAARAD-ARSLA 979

Query: 297  NIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                   +     ++K A      L++ +  + +    + +  L +G+   A    + A+
Sbjct: 980  AQLGKAKTWLAQERMKEAKDLLKELQKTHAAAPQVAYWLGRTELALGNKKDAEQAYLDAV 1039

Query: 353  KIA 355
            K  
Sbjct: 1040 KST 1042



 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 33/221 (14%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----------KN 217
            G   +A    ++A    PD P + +A  +  +    +  A   L              K 
Sbjct: 1063 GRNEAAAEKLSEATAKFPDLPALHKAKAEVALQTGRYDEARQELELALAKEDDLGSQFKL 1122

Query: 218  AKEWNRNRAI-------------------LLIARSLENADKGDMIASYHDAIESLKLCDN 258
               + R R                     L + R L   + G    +     ++L+   N
Sbjct: 1123 GVAYRRLRRFEDAAKVFDKVTAADKDYPGLALERGLLFEETGQSERALEMYADALRKAPN 1182

Query: 259  SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRA 314
             I   +    + +      +AE IL ++ K   +   AN +      +   N    L+  
Sbjct: 1183 DIDLKLRVGSTQVMAGHASQAEPILREVLKDRANSAEANHFLGRALLVRGTNMAEALRFL 1242

Query: 315  LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             R  E++    E  + V   A E     +A      A+++ 
Sbjct: 1243 ERAAELDPNRAEYHLYVGWGANETAQTARAEMALRRALELD 1283


>gi|144900214|emb|CAM77078.1| Fe-S oxidoreductase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 437

 Score = 44.2 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 10/106 (9%)

Query: 188 PWVTEAVVQQY--VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           P +++A+ +       ++   A   L Q         R  AIL+        ++     +
Sbjct: 12  PEISQALARAQTLAAGQKLDEAEKLLAQYPHVPDCVFRRAAILMT------LERWAEAEA 65

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              A+  LKL  +   +++  A +LI QN+ ++A  +LE  +K  P
Sbjct: 66  GFRAL--LKLAPSHFDSAMGLAGALIEQNRAKEAIPLLEAAYKAQP 109


>gi|262304985|gb|ACY45085.1| acetylglucosaminyl-transferase [Ephemerella inconstans]
          Length = 289

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +    H + L  L    I   +     A       L +      A 
Sbjct: 34  GQVTEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEDATRLYLKALDVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G +  + H    +LKL  +   A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGSIPEAIHSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.4 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        + + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVTEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L +      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEDATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + GSI +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIHSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|220918547|ref|YP_002493851.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956401|gb|ACL66785.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 4104

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 41/119 (34%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R GD  SA     +AL++ P          +    A  ++ A+  L +    A     + 
Sbjct: 360 RFGDAESALAALRRALELDPACEPAALQAFEHETDAGRFAEALDVLERHLAAAPAKPAHA 419

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            + + A ++     GD   +      +L+       A+   A  L    + +    +LE
Sbjct: 420 PLRVRAAAIAREKLGDAGRARRHLEAALRADPGHAPAAAALAPLLAEAGEWQPLARVLE 478



 Score = 43.4 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 8/235 (3%)

Query: 95   IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATR 153
            +A      A      V        E LV L++   A A+ +    A  +   M ++   R
Sbjct: 2110 LAHGEPARAAAAWQKVLDLAPDDREALVGLIDALEAGADPEALAQALRRGLAMEELAEGR 2169

Query: 154  EFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
               +  L   +  R+GD   A +   + L++SPD       + +  V A+ W      L 
Sbjct: 2170 AHLLRRLAAVQDERLGDAAGAIQSLKRLLELSPDDREALGRLDRLCVKAERWVDLGDVLA 2229

Query: 213  QKKKNAKEWNRNRAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAAKS 269
            ++   A E      +  + + L    +    D   +     E L+   +   A       
Sbjct: 2230 REIAAAAEAGDANVLGAVRQRLAELKENRLLDREGALELYEEVLRARPDHPEALARLEAM 2289

Query: 270  LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLEEIN 321
            L       +A V LE+ +     P          +    +   +    L L E+ 
Sbjct: 2290 LQKDPGNARAAVALERAYAAAGDPLRQAAVLEQRAGERPDPQERKALYLALAELR 2344



 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 1/131 (0%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    + L + P  P    A+V+      +W+     L ++     +     A+ L   
Sbjct: 78  AEDLYRQLLQLEPAHPVALRALVELLEERGDWAGVAAALEREATATADRAAAAAVTLRLG 137

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            ++    G    +      + +L  +   A   A +   +  +  +A+ +L+        
Sbjct: 138 KVQEERLGRRDRAALLYARAHRLDPSLEEARARAMECFGALRRFAQAKRLLDGARDAGAD 197

Query: 293 P-EIANIYTHL 302
           P  +A  Y  L
Sbjct: 198 PRALAAEYARL 208



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 2/124 (1%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
                D  SA RY  +AL  +P        +   YV    W+ A   L+            
Sbjct: 3352 EERDDRESAARYYEEALKRTPGHLDAARPLSDIYVAQARWADAERVLDVIVGVLDAGGDA 3411

Query: 225  RAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            R +           +  G M  +      + +L    + A       L+ + +  +A  I
Sbjct: 3412 RELCRQCYRQGYVAEKLGRMDKALASYRRAYELDATYLPALEGLGNLLVRREEWDEALRI 3471

Query: 283  LEKI 286
               +
Sbjct: 3472 FTAV 3475


>gi|72382664|ref|YP_292019.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002514|gb|AAZ58316.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 739

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 11/197 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G+L  A+ Y  KA+ I+P+       +        +   A     +  +    +   
Sbjct: 113 RDLGNLQDAELYTRKAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQINPNY--- 169

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A       +   + G++  +     +++++  N   A       L   +  + AE+   
Sbjct: 170 -ADAHYNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGNVLKDLDNLQDAELSYR 228

Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K  ++N  P+ A+ Y++L +      N         +  +IN +  E+   +  +  ++G
Sbjct: 229 KAIQIN--PDHADAYSNLGNVLKDLGNLQDAELSYRKAIQINPDHAEAHFNLGNLLKDLG 286

Query: 340 SIDQAHAKAMLAMKIAP 356
            + +A      +++I P
Sbjct: 287 KLQEAKKVLKKSIEIEP 303


>gi|15676768|ref|NP_273913.1| hypothetical protein NMB0872 [Neisseria meningitidis MC58]
 gi|7226109|gb|AAF41283.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316985766|gb|EFV64710.1| tetratricopeptide repeat family protein [Neisseria meningitidis
           H44/76]
 gi|325133989|gb|EGC56644.1| tetratricopeptide repeat protein [Neisseria meningitidis M13399]
 gi|325142081|gb|EGC64507.1| tetratricopeptide repeat protein [Neisseria meningitidis 961-5945]
 gi|325144095|gb|EGC66402.1| tetratricopeptide repeat protein [Neisseria meningitidis
           M01-240013]
 gi|325200443|gb|ADY95898.1| tetratricopeptide repeat protein [Neisseria meningitidis H44/76]
          Length = 614

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 358

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 359 YAKVRQWLKK-VSAP 372


>gi|330922900|ref|XP_003300018.1| hypothetical protein PTT_11155 [Pyrenophora teres f. teres 0-1]
 gi|311326033|gb|EFQ91876.1| hypothetical protein PTT_11155 [Pyrenophora teres f. teres 0-1]
          Length = 1323

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 12/162 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + Y  A +  +M L+I       +  L    C++ D         K +   P       A
Sbjct: 91  KNYPEAIKSYKMALRIEPNSLNILRDLALLQCQVRDYEGYIESRRKMMQERPQLRQNWTA 150

Query: 194 VVQQYVLAKEWSRA---ITFLNQKKKN---AKEWNRNRAILLIARSLENADKGDMIASYH 247
           +   Y L+  ++ A   +    +  K      +   + A L   ++    + GD+  +  
Sbjct: 151 LAVAYHLSGNYAEAENILKTYEETLKRPPPKTDLEHSEATL--YKNQIIYESGDVERALK 208

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              E ++   +   A    AK L+   +K +A    EK ++V
Sbjct: 209 HLEEVVRDSLDRGAALELKAKYLLELGRKEEA----EKAYRV 246


>gi|295670772|ref|XP_002795933.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01]
 gi|226284066|gb|EEH39632.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01]
          Length = 746

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVL- 200
           Q P          Y +    G+   A ++   AL + PD+          + +++     
Sbjct: 433 QDPDALFLRGRLFYVQ----GENEQAIKHFKLALSLDPDSSQAVKYLRMVQKLLRMKDEG 488

Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                ++++ +AI   ++  +   +     + LL  R+    +  +   S  D  ++L+L
Sbjct: 489 NAAYKSRKYQQAIDIYSKALEIDPKNKNINSKLLQNRAQSYLNLNNYEKSIEDCTKALEL 548

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               + A    AK+        +A   L+KI + NP
Sbjct: 549 DPLYVKAQRVRAKAYGGAGNWEEAVQDLKKISEANP 584


>gi|195490356|ref|XP_002093105.1| GE21142 [Drosophila yakuba]
 gi|194179206|gb|EDW92817.1| GE21142 [Drosophila yakuba]
          Length = 1148

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  +      A  I   K  + + A+I
Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 453



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    + 
Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A+  LE                 
Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESA--------------- 477

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    + + +  ES        ++++   M S D A       +K  P
Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528


>gi|4468812|emb|CAB38213.1| putative protein [Arabidopsis thaliana]
 gi|7270728|emb|CAB80411.1| putative protein [Arabidopsis thaliana]
          Length = 1013

 Score = 44.2 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 17/211 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146
           L  G+  +   N   A  +   V ++   + E L+          +R+   A     + +
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 358

Query: 147 LQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              PA  E          +   G+   A    TKAL   P++P V          +K+++
Sbjct: 359 QSNPAASEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 416

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+  L+   K  K+       L +A +      G+   +    ++S++L  N + A + 
Sbjct: 417 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 472

Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289
            A+         KA   +E+       +WK 
Sbjct: 473 LAQFYQELADHCKALECIEQVLQVDNRVWKA 503


>gi|332880222|ref|ZP_08447903.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681871|gb|EGJ54787.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 491

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 60/279 (21%)

Query: 141 EKLEMMLQIPATREFAVYSLYFES----------CRIGDLNSAQRYATKALDISPDAPWV 190
              E MLQ          S+Y E+              D + A      AL+I P +   
Sbjct: 19  ALYEQMLQ-------GGQSVYLEADELTDIAEYYLVQNDTDKAMACIQYALNIHPGSIDP 71

Query: 191 TEAVVQQYVLAKEWSRA---------------------ITFLNQKKKNAKEWNRNR---- 225
              + +Q +   +   A                     +     K++ A  +   +    
Sbjct: 72  LIFLARQKMFNGDIEGAKTIRDCITDPNDREVIFLNAELLLREGKEQEATTYLSEKAETE 131

Query: 226 ----AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A+     +    D G +  +      +L +  ++       A  LIS N+ ++A  
Sbjct: 132 EEDAALFAYDTATLFLDYGYLEQAAQWGQRALDMEPDNEKFLKLKADHLISSNRPKEAIE 191

Query: 282 ILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           IL  +  +NP      H  +   Y   + E+    ++ A     I++   ++L++ +   
Sbjct: 192 ILNSLLDINPYNLNAWH-SLGEAYF--VCEDFSKTMETADFALAIDEHDAQALLLKANSL 248

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLL-----LAQIEQ 369
           L+  ++D+AH   +   K  P  EI  L     L+ +E+
Sbjct: 249 LQQQNLDEAHQLYLRYFKEHPSNEIPYLFDGVCLSALER 287


>gi|304387813|ref|ZP_07369987.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC
           13091]
 gi|304338078|gb|EFM04214.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC
           13091]
          Length = 616

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 74  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 133 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 186

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 187 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 244

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 245 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 304

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 305 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMIYADRRD 360

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 361 YAKVRQWLKK-VSAP 374


>gi|292489049|ref|YP_003531936.1| hypothetical protein EAMY_2581 [Erwinia amylovora CFBP1430]
 gi|292900178|ref|YP_003539547.1| fimbrial assembly protein [Erwinia amylovora ATCC 49946]
 gi|291200026|emb|CBJ47151.1| putative TPR repeat protein (putative fimbrial assembly protein)
           [Erwinia amylovora ATCC 49946]
 gi|291554483|emb|CBA22013.1| Uncharacterized protein HI0366 precursor [Erwinia amylovora
           CFBP1430]
          Length = 243

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 56/163 (34%), Gaps = 5/163 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L+    + A   L+  L           ++     + GD + A+++  +AL  +P   
Sbjct: 36  AYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQHYHRALAQAPQNG 95

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           +V            ++  A    +  ++++    R  ++          + G    +   
Sbjct: 96  YVLNNYGAFLCGLGQYDAAQRQFSLAREDSVSGLRADSVENSGYC--FLNAGQPDKARKA 153

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290
            +++++            A++     K R++   +L  +++ N
Sbjct: 154 LVDAVQTDP--AKGLPMLAEAERRLGKGRRSESRLLLDVYQHN 194



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 28/167 (16%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              R    I   L     G+M A+  +   +L          +  A+       + +AE 
Sbjct: 23  RHVRVETRIQLGLAYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQ 82

Query: 282 ILEKIWKVNPHPEIANI----YT---------HLLSENTVGK---LKRALRLEEINKESV 325
                   + H  +A      Y           L   +   +   L R   +  +  +SV
Sbjct: 83  --------HYHRALAQAPQNGYVLNNYGAFLCGLGQYDAAQRQFSLAREDSVSGLRADSV 134

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           E+        L  G  D+A    + A++  P  +   +LA+ E+   
Sbjct: 135 ENS---GYCFLNAGQPDKARKALVDAVQTDP-AKGLPMLAEAERRLG 177


>gi|254295375|ref|YP_003061398.1| hypothetical protein Hbal_3033 [Hirschia baltica ATCC 49814]
 gi|254043906|gb|ACT60701.1| Tetratricopeptide TPR_2 repeat protein [Hirschia baltica ATCC
           49814]
          Length = 609

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 5/171 (2%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+ + +   ++ D   +Y    ++ KL   +  A    A  L    +   A+       +
Sbjct: 10  LLHQGMSLYNQKDYRRAYDVFSKAKKLAPQNFDAVYLLAVCLNQLGRLEDAKKQFLNAIQ 69

Query: 289 VNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           +NP H E  N   ++LS        +K   +  + N   + + + +++  +  G   +A 
Sbjct: 70  LNPSHAEAINTLGNVLSKQGKLFSAIKMYRKSVKANVNYLPAFLNLAQKLIVAGQHAEAQ 129

Query: 346 AKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395
                 ++  P   + L+ +A      +   D  L +   A    P+  +I
Sbjct: 130 QYLRRILEAEPNNTLALIAMADAYLGCNQFED-ALEYLLRAQAISPENAYI 179



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 17/202 (8%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           LY +     D   A    +KA  ++P        +            A     ++  NA 
Sbjct: 17  LYNQK----DYRRAYDVFSKAKKLAPQNFDAVYLLAVCLNQLGRLEDA----KKQFLNAI 68

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           + N + A  +       + +G + ++     +S+K   N + A +  A+ LI   +  +A
Sbjct: 69  QLNPSHAEAINTLGNVLSKQGKLFSAIKMYRKSVKANVNYLPAFLNLAQKLIVAGQHAEA 128

Query: 280 EVILEKIWKVNPHPEI-----ANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSK 333
           +  L +I +  P+  +     A+ Y      E+ +  L RA     I+ E+        +
Sbjct: 129 QQYLRRILEAEPNNTLALIAMADAYLGCNQFEDALEYLLRAQ---AISPENAYIEFRFIQ 185

Query: 334 IALEMGSIDQAHAKAMLAMKIA 355
           I L     D+         K  
Sbjct: 186 ICLSRCEFDEVEKNLSAYEKKH 207


>gi|163854538|ref|YP_001628836.1| hypothetical protein Bpet0234 [Bordetella petrii DSM 12804]
 gi|163258266|emb|CAP40565.1| partial homologue to genes conserved in polysaccharide synthesis
           clusters [Bordetella petrii]
          Length = 826

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 79/236 (33%), Gaps = 44/236 (18%)

Query: 125 LEVQIALAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ + AL    Y    +     ++  +  P      +      +  +GD  +A ++  +A
Sbjct: 582 LDARAALLAGNYKEVIDLTDIAIDTHVDFPELDT--MRG--RAADALGDKKTAMQHLERA 637

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              S  AP  T+    +      W              +  +  + +L    + ++A   
Sbjct: 638 -ATSESAPLSTQLYFARVAFNGGWFG------------EAIDAYKMVLAHTSADQSAKD- 683

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------- 292
                     E+ +        +I  A+ ++S    + A  +LE++ K  P         
Sbjct: 684 ----------EAQRQLGRLGPRAIRGAREILSAGDHQAAWNLLERVAKSWPQMAEIDHEK 733

Query: 293 -PEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              +A +Y         +T  +L    R+ ++  +    L + +  A+ +   +QA
Sbjct: 734 RRVLAVLYAEARTLDPSSTTERLALGERILKLVSDDPVGLRLAAVGAMRLHRFEQA 789


>gi|124007785|ref|ZP_01692487.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123986731|gb|EAY26512.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 400

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 88/253 (34%), Gaps = 17/253 (6%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI--PATREFAVYS---LYFESC--RIGDLNSAQRYATK 179
                   + ++  +  +        AT+     S   LY  +      +  +A +  T+
Sbjct: 72  ADAYFERGKTHMLQKHYKKAFNDFVKATQFNPRKSAPYLYKGAIYHEQNEYEAAIQEYTQ 131

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL ++P +        + Y       +AI        +A  ++  +AIL   R     + 
Sbjct: 132 ALRLNPKSAMAYNYRAEAYKEIGFTPKAIE----DYSSAINYDPQQAILYYGRGQCLMES 187

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVI--LEK--IWKVNPHPE 294
                +  D  ++++L  + + +    A +        R A+ +  LE+     + P+  
Sbjct: 188 QKYTQAIKDFSKAIQLQPSILDSYRQRAYAAFLAGNYMRSAQDLDYLEQKDAKNMKPYQY 247

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             + Y    S++  G ++   ++ E+   +    V  ++    +   D A      A++ 
Sbjct: 248 SLSAYCKAASKDYRGAIRAINKVMELEPNNALHYVERAQYHAALAQYDPAINDYTKALEA 307

Query: 355 APRK-EIFLLLAQ 366
            P     + L A+
Sbjct: 308 YPDSVRFYGLRAE 320


>gi|317504147|ref|ZP_07962146.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315664723|gb|EFV04391.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 593

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 8/165 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              L+  +A A  + + A+  L+  ++  P   E   Y   FES +  D + A  Y  KA
Sbjct: 55  TMFLDAILAEAAGKNDSAYSLLQKCIKLNPDAAEAYYYLASFESEKKND-SLALSYLIKA 113

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADK 239
             +SPD     E + + Y+ A+++++AI       K++    +  + +L +    +  D 
Sbjct: 114 HALSPDNEDYQEQLAENYINAQQYAKAIDVYEALVKRHGDRSDVLQVLLQLYN--QQKDY 171

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            +M+ +     ++    +     ++   +    +  K++A   L+
Sbjct: 172 DNMLRTIERLEQNEGNSEG---ITLSKVRVYELKGDKKQAYKALQ 213


>gi|261392775|emb|CAX50351.1| conserved hypothetical TPR-containing periplasmic protein
           [Neisseria meningitidis 8013]
 gi|325198073|gb|ADY93529.1| tetratricopeptide repeat protein [Neisseria meningitidis G2136]
          Length = 614

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 358

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 359 YTKVRQWLKK-VSAP 372


>gi|254670383|emb|CBA05888.1| TPR domain protein [Neisseria meningitidis alpha153]
          Length = 614

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 358

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 359 YTKVRQWLKK-VSAP 372


>gi|149923553|ref|ZP_01911953.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149815572|gb|EDM75104.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 1232

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 17/205 (8%)

Query: 135 QYNIAHEKLEM---MLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWV 190
            +    +  +    + + P  R  A++ L       +GD+  A       LDI P     
Sbjct: 377 NWEALRDVYQRKTELAETPEDRRAALHVLGQVHDRELGDVERAIDTYQAILDIDPMDYVA 436

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            +A+ + +  A+ W   +  L Q  + A       A+     +L      D + +     
Sbjct: 437 IQALDRLFGQAERWHEQLQILEQAVEVADRHEEQTALRHRIGALWEGQLADPVRAVESYR 496

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIANIYTHLLS 304
           E L    +         +      +   A  +LE        W+      + ++Y  ++ 
Sbjct: 497 EVLAHDPSHEPTIEALDRIAHGDTQPMMAAEVLEPFYEQLAEWEK-----LIDLY-EVMV 550

Query: 305 ENTVGKLKRALRLEEINKESVESLV 329
           E+T   + +  RL +I  ++ E  +
Sbjct: 551 EHTEDPIAKIERLHKIA-DTYERQL 574


>gi|331682769|ref|ZP_08383388.1| putative heat shock protein [Escherichia coli H299]
 gi|331080400|gb|EGI51579.1| putative heat shock protein [Escherichia coli H299]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 62/281 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   ++++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESMQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361
               +   L +  I +A   +  A       ++  P   +F
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318


>gi|300716934|ref|YP_003741737.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299062770|emb|CAX59890.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 17/165 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  +     A +      D   
Sbjct: 83  GEVDRAIRIHQALMESASLTYDQRLLAVQQLGRDYMAAGFYDR----AEEMFSQLVDETD 138

Query: 190 ----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIA 244
                 + ++  +    +W +AI    +  K  K+  R   A      +L+     D+  
Sbjct: 139 FRVGALQQLLIIHQATSDWPKAIEVAERLVKLGKDKQRMEIAHFYCELALQAMGSDDLDR 198

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK 285
           +     +       S   SI   +  +++ +  KA    + +LE+
Sbjct: 199 AMGLLRKGESADRQSARVSIMMGRIHMAKGEYAKAVGHLQRVLEQ 243


>gi|256391357|ref|YP_003112921.1| serine/threonine protein kinase [Catenulispora acidiphila DSM
           44928]
 gi|256357583|gb|ACU71080.1| serine/threonine protein kinase [Catenulispora acidiphila DSM
           44928]
          Length = 765

 Score = 44.2 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 12/119 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+ +A+  I  A +M + V        E    L     A     +  A      M+  
Sbjct: 551 RGLIQLASGVITQAARMFTAV--YDALPGEPAPKLALGACAELLGDFETASRYYG-MVWR 607

Query: 150 PATREF-AVYSLYFESCRIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVLAKE 203
             T    A + L       G  ++A     +A    P          EA ++  ++ ++
Sbjct: 608 TDTGYVSAAFGLARALLNTGRRDAAV----RAFGAVPQTSTHHTAANEAALRALLVDRD 662


>gi|332017474|gb|EGI58197.1| Intraflagellar transport protein 172-like protein [Acromyrmex
            echinatior]
          Length = 1733

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 83/320 (25%), Gaps = 67/320 (20%)

Query: 93   MSIAAHNIPLARKMHSY------VSQQHTFHNEYLVY---LLEVQIALAE-RQYNIAHEK 142
            + I + +   A ++          +Q    H E L     L   +        ++ A   
Sbjct: 951  IHIQSGDWMRAHQVAQEHMKSEEANQVLAKHAESLQQNGELRHAESLYVAIGDHDAAIAM 1010

Query: 143  LEMMLQIPAT-REFAVYSLYFESCRIGD--LNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                       R          +    D    + Q  A + LD +       E  +    
Sbjct: 1011 YRKAGNRSDMVRLV--------AQHRPDLLQTTHQHLARE-LDAASKPREAEEHFLG--- 1058

Query: 200  LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCD 257
             A +W  A                 R+  +   +L  A K     +      + +  L  
Sbjct: 1059 -AGDWRGA-------------VTAYRSANMWEDALRVAKKASGEKAAQQVALMWARTLAP 1104

Query: 258  NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
                     A+ L+        E  L+   + N    + +    +   +TV + K     
Sbjct: 1105 EL------GARLLMRLG---YLESCLQLACEAN----LFDWALEIAKYSTVDQKKEVHYR 1151

Query: 318  EEINKESVESLVIVSKIA-LEMGSIDQA---------HAKAMLAMKIAPRKEIFLLLAQ- 366
              +  E  E   + ++   ++ G   +A            A    +   ++ +  +L   
Sbjct: 1152 YAMALED-EGRFVEAEKEFVQAGKTMEAVQMYIHTRDWESAEDVARSHSQEAVAQVLIAR 1210

Query: 367  -IEQANSHNTDKILYWTQSA 385
              E A   +          A
Sbjct: 1211 AAEAAEGQDYATAEALLLRA 1230



 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 84/239 (35%), Gaps = 49/239 (20%)

Query: 163  ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            E+    D  +A+    +A           E +++ Y  A  WS A+    +   + +   
Sbjct: 1213 EAAEGQDYATAEALLLRAHK--------PEIIIEHYKTAGMWSEALRVCREYLPSQEAAL 1264

Query: 223  RNR-----AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNK 275
            R       A L  A +LE A K   +     A+++L L       S    AA  L+ Q  
Sbjct: 1265 RRELGQRSAGLDGANALEEARKWLNLGEVRPALDTLILNPQ-APRSYLIRAADILLHQAD 1323

Query: 276  KRKAEVI----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
               A  I     E+++ V  H   A ++          +LK          ++V SLV V
Sbjct: 1324 PETAAEIGGNLGERLFSVGEHALAAQVFLQ------ADRLK----------DAVSSLVTV 1367

Query: 332  SKIALEMGSIDQAHAK-AMLAMKIAPR--KEIFLLLA---QIEQANSHNTDKILYWTQS 384
                   G  D+A      LA  + P   ++    +A   +IE+    +++  L     
Sbjct: 1368 -------GEWDRARRIVRELAPDLEPYLEEKYQDAMANEGEIERLAEVDSNAALEVMAR 1419


>gi|237654280|ref|YP_002890594.1| hypothetical protein Tmz1t_3624 [Thauera sp. MZ1T]
 gi|237625527|gb|ACR02217.1| Tetratricopeptide TPR_2 repeat protein [Thauera sp. MZ1T]
          Length = 571

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 4/158 (2%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
             IAR+       D + +      +L+L      A +   + L       +A  +LE   
Sbjct: 187 AHIARAQAAQAVEDRMGALAAVDRALELRSGWEPAVLLKVQILQQAGAHTEALRVLEAEA 246

Query: 288 KVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P      +A     + ++          +L E + +  E L  V  +++++     A
Sbjct: 247 ARAPASRSLRLAKARALVSAQRFGEARAAFNQLLEASPQDPELLYAVGLLSMQLEDFAAA 306

Query: 345 HAK-AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
               A       P+ ++  L      A+    ++   W
Sbjct: 307 ELHFARALAAEHPQPDLIRLHLGQIAADRGEGERARKW 344


>gi|254523006|ref|ZP_05135061.1| TPR repeat protein [Stenotrophomonas sp. SKA14]
 gi|219720597|gb|EED39122.1| TPR repeat protein [Stenotrophomonas sp. SKA14]
          Length = 293

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 6/151 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   H    +Q       L  LL+        Q + A      +   P       + L  
Sbjct: 62  ASLAHVDAFRQRYGDRPAL-RLLQADALRETGQADAAIALYRELSTGPQAAAA-AHGLGL 119

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            +    D   +++   +A  + P        +    + A ++ +A   L +  + +    
Sbjct: 120 IAAHRDDDAGSEQSLARATQLEPLNTDYLGDLGYARLRAGQFDQAREPLAKALELSPGNA 179

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  A L    +L    +GD   +   A ++ 
Sbjct: 180 KATANL----ALWAVLRGDTATAERLAQQAN 206


>gi|83311940|ref|YP_422204.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
           magneticum AMB-1]
 gi|82946781|dbj|BAE51645.1| Predicted O-linked N-acetylglucosamine transferase
           [Magnetospirillum magneticum AMB-1]
          Length = 728

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 88/256 (34%), Gaps = 15/256 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+ ++       A +    ++ +     E   YL      L+  + + A E L  +++ 
Sbjct: 11  QGIGALQQGKWDEAARQFRTLTGRTPNAPEPFYYL--GVALLSGGKPDEAAETLTRLIRK 68

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A+ +L       G    A++   + L ++PD     E + +  + ++  + A+ 
Sbjct: 69  HGDNPMALNALGSAQAASGKTGPAEKSFKRVLALAPDLSDAAENLARLLIESQRAAEALA 128

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L        E  R  +  L+ R+L   D G++  +  +    LK   +   A       
Sbjct: 129 PLRSVLSR--EPGRLASRHLLGRAL--RDTGELEGAMAEFQAVLKAQPDFAPALNDLGLL 184

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKE 323
             +  K   A    E +  +NP   +A     L        E    +      +   + +
Sbjct: 185 YFAGGKGEDALACFEHLLALNPADHVAANNRALTLRVLNRPEEAEQQ---YRAILARHPQ 241

Query: 324 SVESLVIVSKIALEMG 339
           + E  + + K+   MG
Sbjct: 242 APEVNLNLGKLLARMG 257


>gi|289192665|ref|YP_003458606.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
           FS406-22]
 gi|288939115|gb|ADC69870.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
           FS406-22]
          Length = 323

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 13/191 (6%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA-VYSLY 161
           RK    V        E +  +L     L E     A   + + +   P       +  L 
Sbjct: 3   RKRTPRVDAL-----EAVANVLRAYRELFEGNLIKALYYVDKALELEPDFYLALFLKGLI 57

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +   G++  A     + L      P     V Q Y ++     A+   ++      E 
Sbjct: 58  LYAK--GEVKEAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALRCYDKAL--GIEN 113

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A LL    LE    G+         E L    N +   +  A+ L    +   A +
Sbjct: 114 KFLSAFLLKTICLEFL--GEYDELLKCYDEILSYVPNFVPMWVKKAEILRKLGRYEDALL 171

Query: 282 ILEKIWKVNPH 292
            L +  ++ PH
Sbjct: 172 CLNRALELKPH 182


>gi|194864807|ref|XP_001971117.1| GG14779 [Drosophila erecta]
 gi|190652900|gb|EDV50143.1| GG14779 [Drosophila erecta]
          Length = 1150

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  +      A  I   K  + + A+I
Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 453



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    + 
Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A+  LE                 
Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESA--------------- 477

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    + + +  ES        ++++   M S D A       +K  P
Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528


>gi|159027096|emb|CAO89281.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 251

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 68/180 (37%), Gaps = 13/180 (7%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           QY    ++ ++I  L +  +        R IL   + L        +A+     E++K+ 
Sbjct: 62  QYRQQGDFIKSIEALKKSVQLNPNHLDGRVILGWTQHLAK----QPLAAQTTLEETIKIA 117

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLS-ENTVGK 310
            + + A        +      KA V   K   + P  EIA       Y  L   ++ +  
Sbjct: 118 PDHVAAYNALGIVYLVGGHLEKAVVTHTKAASLKPDNEIAYYNLSLAYHRLKDFDSAITN 177

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            K+A++LE     +   LV ++ I L+ G   +A      A  +  R      LA +++A
Sbjct: 178 AKKAVKLE---PNNPHPLVALAMIYLDQGDSKKAQDTYKKARDLDGRYREKWFLAHLKEA 234



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 4/115 (3%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +AQ    + + I+PD      A+   Y++     +A+    +      +      I    
Sbjct: 105 AAQTTLEETIKIAPDHVAAYNALGIVYLVGGHLEKAVVTHTKAASLKPDNE----IAYYN 160

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            SL      D  ++  +A +++KL  N+    +  A   + Q   +KA+   +K 
Sbjct: 161 LSLAYHRLKDFDSAITNAKKAVKLEPNNPHPLVALAMIYLDQGDSKKAQDTYKKA 215


>gi|13472730|ref|NP_104297.1| O-linked GlcNAc transferase [Mesorhizobium loti MAFF303099]
 gi|14023477|dbj|BAB50083.1| O-linked GlcNAc transferase [Mesorhizobium loti MAFF303099]
          Length = 280

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 8/132 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             +   A    +  +Q+  T   A     L ++S   G    A    + A+ ++PDA   
Sbjct: 147 AGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQ--GQHKFAIEDFSTAISLAPDAAEP 204

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                  Y+   +   A +  N   K     +   A     ++L    +GD   +     
Sbjct: 205 YNGRGLSYLATGDEDNAFSDFNMAIK----LDGQNAEAWANQALIYERRGDKAKAAKSYK 260

Query: 251 ESLKLCDNSIMA 262
           E+++L  N   A
Sbjct: 261 EAVRLNPNYQPA 272


>gi|89094909|ref|ZP_01167841.1| TPR domain protein [Oceanospirillum sp. MED92]
 gi|89080866|gb|EAR60106.1| TPR domain protein [Oceanospirillum sp. MED92]
          Length = 564

 Score = 44.2 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 18/210 (8%)

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                    LY E         A     KAL+        T A+++           ++ 
Sbjct: 117 EANMLLHQGLYQE---------ALPLVKKALEFD---ALRTLALIRGQANRIN-KDVLSS 163

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                K  +     RA L +  +L +  +G   ++      +L +  ++  A I  A+ L
Sbjct: 164 YVTMLKAFRTEETPRADLELTLALLHKAEGATQSALSAFNRALSIDPDNPEALIQKAELL 223

Query: 271 ISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEIN-KESVE 326
                 + A  ++E  ++  P + ++  +YT L   ++ T   + +A  L + N K+   
Sbjct: 224 REDEDIKGALQLIEAAFEQQPENRQLHILYTQLLFQTKQTKKGVTQAEALVQNNLKDHQL 283

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  + + + LE  + + A       +++ P
Sbjct: 284 TYYL-ALLMLENEAPESALKAFNHLLELKP 312


>gi|301092739|ref|XP_002997222.1| mitochondrial import receptor subunit TOM70, putative [Phytophthora
           infestans T30-4]
 gi|262111493|gb|EEY69545.1| mitochondrial import receptor subunit TOM70, putative [Phytophthora
           infestans T30-4]
          Length = 595

 Score = 44.2 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 88/239 (36%), Gaps = 28/239 (11%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----W 221
            G+   A++   K+L+  P + +    +       K+  +A+ + ++      E     +
Sbjct: 329 RGEFELARKSFEKSLNAKPRSIFAKIRMGGLCFDQKDLKKALEWFDKALAEKSECSTAYF 388

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R +   +       +++  M A+ +D  + + +  +  MA I    +       + A  
Sbjct: 389 HRGQLHSIDVSLDGTSNESSMGAALNDLEKCISIAPDFAMAYIQLGVTHARTGNFQGAVE 448

Query: 282 ILEKIWKVNPH-PE----IANIYTHLL--SENTVGKLKRALRL----EEINKESVESLVI 330
            L    ++ P  PE    +   Y  +L    +TV  LK    +     E++     + + 
Sbjct: 449 YLTTAARITPDVPEIYNYLGETYMQMLQAPGSTVD-LKTVEEMFEEAIELDPSYPMAYIN 507

Query: 331 VSKIALEMG-SID-QAHAKAMLAMKIAPR--------KEIFLLLAQIEQA-NSHNTDKI 378
              + ++ G     QA A    A+++ PR         ++++ + +  +A    +    
Sbjct: 508 QGNLLVQKGTEYGHQALALFEKAVEMCPRSKFAYCHLAQVYMAMQEYSRAIEQIDKAVA 566


>gi|254470075|ref|ZP_05083479.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062]
 gi|211960386|gb|EEA95582.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062]
          Length = 605

 Score = 44.2 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 22/205 (10%)

Query: 134 RQYNIAHEKLEM------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                A   L        M +    +    Y++        +L  A+ +  K ++  P  
Sbjct: 349 GDNERAIAYLSEVSESSPMKREAEIQIALHYNIL------DNLEEARAHLEKLVESDPTD 402

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                ++         +  A T  +Q      E   N   LL  R +    +    A+  
Sbjct: 403 LEAITSLGNVLRGHSLFEEAETSYDQGLSTLNEIQSNHWTLLYFRGITRERQNKWDAAEE 462

Query: 248 DAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPH-----PEIANIYTH 301
           D  E+L L     M       SL+ +  K  +A+ ++E+  ++ P        +  +Y  
Sbjct: 463 DFREALTLKPEQPMILNYLGYSLVDRGLKLDEAQKMIERAVRLRPTDGYIVDSLGWVYYR 522

Query: 302 L-LSENTVGKLKRALRLEEINKESV 325
           L   E  V KL+RA     +     
Sbjct: 523 LGRYEEAVEKLERA---VALRPHDP 544


>gi|88810853|ref|ZP_01126110.1| hypothetical protein NB231_17273 [Nitrococcus mobilis Nb-231]
 gi|88792483|gb|EAR23593.1| hypothetical protein NB231_17273 [Nitrococcus mobilis Nb-231]
          Length = 564

 Score = 44.2 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 94/296 (31%), Gaps = 45/296 (15%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFES 164
           +   Q      + L +L+  ++A +      A         +   PA  E A   +   +
Sbjct: 32  AGADQASEAKADLLYHLMVAELAGSRGDLGRAASDYLAAARLSSDPAVAERATR-IALLA 90

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK---------- 214
            R G    A   A +   + P++    + V    V   E  +A+T L             
Sbjct: 91  KREG---LALAAADRWHGLLPNSLEARQTVGLLSVRRSEVDKAVTALAATVQMAPGGAAQ 147

Query: 215 ----------------------KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                                 ++ A+++ +NRA    A +           +     E+
Sbjct: 148 GLESLSAILSQEADNPAALQVMQRVAEKYPKNRAS-YYAVAQVALQSQQPAVALTALNEA 206

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTH--LLSENTVG 309
           L L      A +   ++ +   + ++A   L  + + +P   ++   Y H  +    T  
Sbjct: 207 LALSPQWRAAYLLRVETYLRLERPQEALDDLSSLLRSSPQDYDLRLRYAHTLISLSRTRE 266

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM--LAMKIAPRKEIFLL 363
            L    +L + + +   +L   + +A++     QA       LA+        + L
Sbjct: 267 ALAEFRKLLQRHPDDARALYPAALLAIDAQFNAQARTWLQRLLALGERTDAAHYFL 322


>gi|218699992|ref|YP_002407621.1| tetratricopeptide repeat protein [Escherichia coli IAI39]
 gi|218369978|emb|CAR17752.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWN-RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+      A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQCVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364
               +   L +  I +A   +  A       ++  P   +F  L+
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322


>gi|240279926|gb|EER43431.1| pre-mRNA splicing factor [Ajellomyces capsulatus H143]
 gi|325093056|gb|EGC46366.1| pre-mRNA-splicing factor [Ajellomyces capsulatus H88]
          Length = 941

 Score = 44.2 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 29/161 (18%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   +A + +P+   +  A V+    A +   A   L+  ++ A 
Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADANQTEHARELLSTARREAG 675

Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250
                   +   R L N                              ++     +     
Sbjct: 676 TDRVWIKSVAFERQLGNTEQALDLANQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              + C  S+   + A++         KA  IL++     P
Sbjct: 736 TGTRACPRSVPLWLLASRLEEKAGVVVKARSILDRARLAVP 776


>gi|225563100|gb|EEH11379.1| pre-mRNA-splicing factor [Ajellomyces capsulatus G186AR]
          Length = 941

 Score = 44.2 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 29/161 (18%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++A+R   +A + +P+   +  A V+    A +   A   L+  ++ A 
Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADANQTEHARELLSTARREAG 675

Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250
                   +   R L N                              ++     +     
Sbjct: 676 TDRVWIKSVAFERQLGNTEQALDLANQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              + C  S+   + A++         KA  IL++     P
Sbjct: 736 TGTRACPRSVPLWLLASRLEEKAGVVVKARSILDRARLAVP 776


>gi|116622726|ref|YP_824882.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 547

 Score = 44.2 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 70/221 (31%), Gaps = 13/221 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A A  ++ +  +   +++          ++L     + G    A    ++ + + P +  
Sbjct: 242 ACAAGEHALTAKFCTLLVNSVPGHFEGWFNLALAHQKSGRFEQAAEAYSECVKLRPQSCE 301

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +        + + A +   +  K   +        L   +L     G    S    
Sbjct: 302 SHTNLGIVREQTGDTAGARSSYERAIKAGPDA----LAPLWNLALLLEHAGQFEESERYY 357

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK------IWKVNPHPEIANIYTHLL 303
            + L        A        + +   R A    E        W    H  +A  Y+ + 
Sbjct: 358 KQVLDRAPKEEEARFRMGFLRLQREDYRGAAEAFEGCLKYRPAWPEA-HANLALAYSGMG 416

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             +   +L    ++ + + +S+++L  ++ ++++    D A
Sbjct: 417 ERDHAERL--YEKMLDADPKSMDALRGLAALSIQANDYDTA 455



 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 87/274 (31%), Gaps = 19/274 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            L    +     A + +S   +      E    L  V+          A    E  ++  
Sbjct: 273 ALAHQKSGRFEQAAEAYSECVKLRPQSCESHTNLGIVR--EQTGDTAGARSSYERAIKAG 330

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 +++L       G    ++RY  + LD +P        +    +  +++  A   
Sbjct: 331 PDALAPLWNLALLLEHAGQFEESERYYKQVLDRAPKEEEARFRMGFLRLQREDYRGAAEA 390

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                K    W    A L +A S    ++      Y   +++      S+ A    A   
Sbjct: 391 FEGCLKYRPAWPEAHANLALAYS-GMGERDHAERLYEKMLDA---DPKSMDALRGLAALS 446

Query: 271 ISQNKKRKA----EVILEKIWKVNPHPEI----ANIYTHLLSENTVGKLKRALRLEEINK 322
           I  N    A      +++   +    PE+      +Y     ++   +L R   L +   
Sbjct: 447 IQANDYDTALEFHVRLIDLGDRT---PEVLYNAGLMYEKAGQQDKSVRLYR-DALAQQA- 501

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  E+L+ + +I    G  ++A      A++  P
Sbjct: 502 DMPEALLNLGRILESNGKAEEARTCWAKALEAEP 535



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 6/162 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A +      +      E    L          + + A    E ML        A+ 
Sbjct: 383 DYRGAAEAFEGCLKYRPAWPEAHANL--ALAYSGMGERDHAERLYEKMLDADPKSMDALR 440

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   S +  D ++A  +  + +D+    P V       Y  A +  +++         A
Sbjct: 441 GLAALSIQANDYDTALEFHVRLIDLGDRTPEVLYNAGLMYEKAGQQDKSVRLYRDAL--A 498

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           ++ +   A+L + R LE+   G    +     ++L+      
Sbjct: 499 QQADMPEALLNLGRILES--NGKAEEARTCWAKALEAEPALA 538



 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 92/266 (34%), Gaps = 8/266 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             ++ A +   +++Q+        ++L     R G    A +   +A  + P        
Sbjct: 76  GSFDEAAKSYRILVQVKPQYSMGWFNLAVCLERAGVWEDAAQSFHRAATLEPGYLDAHLG 135

Query: 194 VVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +   ++  ++   A+   ++  + NA   +      +  +SL +A+  D    Y   +E 
Sbjct: 136 LGVCHLRQEDPKSALFSFDRCLELNASHVDAQFGKAVALQSLGHAE--DASQIYQKILEK 193

Query: 253 LKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
               ++S+   I    +    +  R  +E +LE   +     E    +     E+ +   
Sbjct: 194 NPDSEDSLSNLILIGMAKEDFDMVREYSEHLLELRPESTVALEGLASWACAAGEHALT-A 252

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           K    L        E    ++    + G  +QA       +K+ P+         I +  
Sbjct: 253 KFCTLLVNSVPGHFEGWFNLALAHQKSGRFEQAAEAYSECVKLRPQSCESHTNLGIVREQ 312

Query: 372 SHNTDKILYWTQSALHAMPD---PLW 394
           + +T       + A+ A PD   PLW
Sbjct: 313 TGDTAGARSSYERAIKAGPDALAPLW 338


>gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 819

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 79/310 (25%), Gaps = 55/310 (17%)

Query: 134 RQYNIAHEKLE-MMLQIPATR-------EFAVYSLYFESCRIGDLNSAQRYATKALDIS- 184
            +++ A    E  +     T             +L       G  + A  Y  KAL I  
Sbjct: 284 GEHDRAIAYFETALAIRLRTEGEKGGNVAVLYNNLGNAYFSKGAYDRAIHYYDKALAIKV 343

Query: 185 -------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---------KNAKEWNRNRAIL 228
                  P        +   Y    ++ +AI    +           K+         + 
Sbjct: 344 ETLGEKHPSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYNNLG 403

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEK 285
               S  + D+         AI    L +     +        +  S+    +A    EK
Sbjct: 404 SAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSKGAYDRAIHFYEK 463

Query: 286 IWKVNP------HPEIANIYTHL----LSENTVGKLKRA---------LRLEEINKESVE 326
              +        HP  A  Y +L     ++    +               L + +  + +
Sbjct: 464 ALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEVLGKKHPSTAQ 523

Query: 327 SLVIVSKIALEMGSID-------QAHA-KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           +   +       G          +A A       +  P   + L    +        ++ 
Sbjct: 524 TYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHPYTAMTLANIGLLHDKRGEKEQA 583

Query: 379 LYWTQSALHA 388
             +TQ AL A
Sbjct: 584 CAYTQQALDA 593


>gi|317033275|ref|XP_001395168.2| heat shock protein STI1 [Aspergillus niger CBS 513.88]
          Length = 580

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 12/146 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A E     L    T +         + +  D       A K   + P        
Sbjct: 346 GDLTQAIEYYHKSLTEHRTPDVLTK--LRNAEKAKDK------AEKEAYVDPAEAEKARE 397

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + Q+     +W  A+    +  K A +  R        R+           +  D  E+ 
Sbjct: 398 LGQKKFQEADWPGAVEAFTEMVKRAPQDPRG----FSNRAAALIKLMAFPQAVQDCDEAT 453

Query: 254 KLCDNSIMASICAAKSLISQNKKRKA 279
           K     I A +  A++LI+  +  KA
Sbjct: 454 KRDPKFIRAYMRKAQALIAMKEYNKA 479


>gi|308389044|gb|ADO31364.1| putative periplasmic protein [Neisseria meningitidis alpha710]
 gi|325129996|gb|EGC52790.1| tetratricopeptide repeat protein [Neisseria meningitidis
           OX99.30304]
          Length = 612

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 356

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 357 YAKVRQWLKK-VSAP 370


>gi|303251471|ref|ZP_07337647.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302649703|gb|EFL79883.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 398

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 36/196 (18%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 91  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           ++  L     +  +   A   A K + I P                              
Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEP------------------------------ 180

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +  +   +      A++++N D    +++   A+E          ASI      ++QN+
Sbjct: 181 -DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALE---YSPQCARASILLGDYYLAQNQ 236

Query: 276 KRKAEVILEKIWKVNP 291
            + A    E+I + +P
Sbjct: 237 FQSALKNYERILQQDP 252


>gi|168705189|ref|ZP_02737466.1| hypothetical protein GobsU_36991 [Gemmata obscuriglobus UQM 2246]
          Length = 863

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 1/130 (0%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            +L   ++AL +    +A E L+   +  A ++   + L   +    D   A +   +AL
Sbjct: 177 AHLAVAELALTKHDRALAAETLQKAPKEAAGQDPRYHHLLARAFAEDDRARATKAIAEAL 236

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            I+P             + A++++ A   L           R  A    A +    D   
Sbjct: 237 AINPHHADSLLFRADHLIDAEDFAGAEDVLKAVLATDPGEPRAWAY-RAAVAHLREDAAG 295

Query: 242 MIASYHDAIE 251
             A+   A+ 
Sbjct: 296 EKAAREKALA 305



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 5/112 (4%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IP 150
           +  A  +   A +        +         L   Q A    + N A      +L+  +P
Sbjct: 743 LGAAGGDWTAAARNARRWLAVNPLTPTPHRAL--AQAAEHLNERNEATTAYRAVLRFGVP 800

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                    L     + G+ ++A+R   KAL+ +P      E +++    A+
Sbjct: 801 DAASVRYR-LAVLLEQSGERDAARREVLKALEEAPRFREAHELLLKLVAAAE 851



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 67/227 (29%), Gaps = 16/227 (7%)

Query: 166 RIGDLNSAQRYATKALDISPD---APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
             G+  +A +    A    PD      +   V +     KE +  +  + ++  N     
Sbjct: 79  ARGEYTAAGKTIEDARTRFPDDLVLHLLAHEVYRTSGREKEAAATLAAVQRQIDNRAAST 138

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               + L    L        +   +     +K     + A +  A+  ++++ +  A   
Sbjct: 139 PAERVALGRYLLSTGADAKEVLDRYF-NPVVKNTPAYLDAHLAVAELALTKHDRALAAET 197

Query: 283 LEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           L+K  K         H  +A  +     ++     K       IN    +SL+  +   +
Sbjct: 198 LQKAPKEAAGQDPRYHHLLARAFAE---DDRARATKAIAEALAINPHHADSLLFRADHLI 254

Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIE--QANSHNTDKILY 380
           +      A       +   P +   +   A +   + ++        
Sbjct: 255 DAEDFAGAEDVLKAVLATDPGEPRAWAYRAAVAHLREDAAGEKAARE 301



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 14/200 (7%)

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------RNRAILLIARSL 234
           L   P + W  + + +  V  ++W+ A   LN  +    E+          A+L    + 
Sbjct: 656 LQKHPQSFWGRQRLCRGLVREQKWAEAEKELNALRTLYPEYAGPNNAYELLAVLYRQTAR 715

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
              +   +        ++                   +    R+   +        PH  
Sbjct: 716 PKEEGAALEEWAKRDGDATAAHQRLTELGAAGGDWTAAARNARRWLAV--NPLTPTPHRA 773

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    HL   N      RA  L     ++      ++ +  + G  D A  + + A++ 
Sbjct: 774 LAQAAEHLNERNEATTAYRA-VLRFGVPDAASVRYRLAVLLEQSGERDAARREVLKALEE 832

Query: 355 APRKE-----IFLLLAQIEQ 369
           APR       +  L+A  E+
Sbjct: 833 APRFREAHELLLKLVAAAEK 852


>gi|82776644|ref|YP_402993.1| tetratricopeptide repeat protein [Shigella dysenteriae Sd197]
 gi|309789047|ref|ZP_07683642.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
 gi|81240792|gb|ABB61502.1| putative heat shock protein [Shigella dysenteriae Sd197]
 gi|308923318|gb|EFP68830.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 41/194 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +     +NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADNNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKI 286
           + +  KA   L+++
Sbjct: 227 KGEYAKAVESLQRV 240


>gi|329999181|ref|ZP_08303373.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
 gi|328538373|gb|EGF64503.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
          Length = 1350

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 25/275 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188
                 A ++ E +LQ       A+  + + + R GD  +A +Y ++A D+  DA     
Sbjct: 283 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 342

Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               +A+    +   + +     ++Q    +    +       +  L  AD         
Sbjct: 343 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGAQGASAKLFRADVLRHNKDLP 402

Query: 248 DAIESLKLCDNSIMASICAAK-----SLISQNKKRKAEVILEKI-----WKVNPH----- 292
            A ++L+   N    +  AA+      L  QNK  +A+ +L+ +      K+ P      
Sbjct: 403 QAEQTLRSLLNDDPQNA-AARENLYYVLREQNKSAEAQAMLQTLPQSLRQKLQPRVVAGM 461

Query: 293 PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           P  A        + S N  G +           +     + ++++  + G+  +A +   
Sbjct: 462 PGDALRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSLMS 521

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
            A +           A +  + +    +       
Sbjct: 522 AAYRPGASNSALYA-AALFASENGAWQQAQTLLAR 555



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 101/367 (27%), Gaps = 79/367 (21%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           + +   +R      +A   G  ++ + N   A++    V Q +    + L  +    IA 
Sbjct: 261 VQNYFRQRRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 315

Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176
               Y  A + L                   +   Y    ++    + G+++ A      
Sbjct: 316 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 375

Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                 A  A         L  + D P   + +        + + A   L    +   + 
Sbjct: 376 LAQQSGAQGASAKLFRADVLRHNKDLPQAEQTLRSLLNDDPQNAAARENLYYVLREQNKS 435

Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258
              +A+L                          ++      G+   +     E +    +
Sbjct: 436 AEAQAMLQTLPQSLRQKLQPRVVAGMPGDALRRQAQAQVSSGNPAGAIATLREGVARYPD 495

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
                +  A+ L       +A  ++   ++  P    + +Y   L  +  G  ++A  L 
Sbjct: 496 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNSALYAAALFASENGAWQQAQTLL 553

Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359
                  ++               ++ ++  L  G+   A           P+      +
Sbjct: 554 ARIPGGSQTSDMRDLRQRVNYNLQLVTAENYLAQGNTIAASNTLRAMASTPPKAPADAGK 613

Query: 360 IFLLLAQ 366
           +  LLA+
Sbjct: 614 LARLLAE 620


>gi|322435245|ref|YP_004217457.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9]
 gi|321162972|gb|ADW68677.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9]
          Length = 839

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 98/294 (33%), Gaps = 39/294 (13%)

Query: 135 QYNIAHEKLEMMLQIPATRE------FAVYSLYFESCRIGDLN---SAQRYATKALDISP 185
             + A E  E  +               +  L + S  +G       A+R   KAL + P
Sbjct: 527 DLDRARELFES-VTTQDVDFAPGWSGLGITHLQYASHGLGGQMHVLEARRAFDKALQLDP 585

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            +       V   +   E   A   +    ++A   N     L+  ++L     G    +
Sbjct: 586 GSVESNLYRVYMLLSRGEKESARHGIENLLQSA--GNDWNVHLVAGQTLRI--DGMYEEA 641

Query: 246 YHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                 +L+L  ++  A++     A+    QN+   A   LEK   + P   +  I    
Sbjct: 642 LEQFNTALRLNPSN--AALIYNNRARVFQYQNQLELAADELEKGLTLEPKQPLLRISLGY 699

Query: 303 LSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHA---KAMLAMKIAP 356
               T    K    LE++  E     ++   ++   +++G  ++A        L+   A 
Sbjct: 700 QQMRTGDLAKAIETLEKVTSEEKSLRIVYPTIALCYVQLGDREKAATFIVDETLSAAEAD 759

Query: 357 RKEIFLLLA--QIEQANSHNTDKILYWTQSALHAMPD--------PLWISDDGY 400
            +  + L     +E     +  + L+W + A++   +        P W    G+
Sbjct: 760 SEMAYRLATYFALE----GDESEALHWLRRAIYLGNENYPWFSINPAWRKLGGH 809



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 26/182 (14%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MM 146
           LY   M ++      AR  H   +   +  N++ V+L+  Q    +  Y  A E+    +
Sbjct: 592 LYRVYMLLSRGEKESAR--HGIENLLQSAGNDWNVHLVAGQTLRIDGMYEEALEQFNTAL 649

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALDISPDAPWVTEAVVQQYVLAK 202
              P+        +Y    R+    +    A     K L + P  P +  ++  Q +   
Sbjct: 650 RLNPSNAAL----IYNNRARVFQYQNQLELAADELEKGLTLEPKQPLLRISLGYQQMRTG 705

Query: 203 EWSRAITFLNQ---------------KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           + ++AI  L +                    +  +R +A   I     +A + D   +Y 
Sbjct: 706 DLAKAIETLEKVTSEEKSLRIVYPTIALCYVQLGDREKAATFIVDETLSAAEADSEMAYR 765

Query: 248 DA 249
            A
Sbjct: 766 LA 767


>gi|116626875|ref|YP_829031.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116230037|gb|ABJ88746.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 673

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 21/234 (8%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRN 224
                  A+    +AL + P+      A+    +  + +W+ A     + +    E    
Sbjct: 423 AEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGANASFQRAR----ELEPG 478

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVIL 283
            A  +   +    + G +  +      ++++   +S+  +      L    +  +A    
Sbjct: 479 NAEAIRGAASLANNLGHLDEAVALGRRAIEIDPLDSVTYNNL-GIVLYRAGRPEEAVAEF 537

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++ P     H  I  +Y  L+       L  A  L E        L  +      +
Sbjct: 538 RRALEITPERERTHSMIGRVY--LVQSRPQEAL--AEMLLEKRP--AFRLFGLGLAYHAL 591

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           G   ++ A     ++  P    + + A++  A     +K   W + A +A PDP
Sbjct: 592 GRKQESDASLAELIQKFPTGYPYQI-AEL-YAFRGENEKAFEWLERA-YAEPDP 642


>gi|57999456|emb|CAI45938.1| hypothetical protein [Homo sapiens]
          Length = 914

 Score = 44.2 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLVRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 688 EIWMKKAIKLQAD 700


>gi|299138067|ref|ZP_07031247.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298599997|gb|EFI56155.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 691

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 35/194 (18%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            N+A++ A +AL + P       A+     L   W  A+     + + A E + +++   
Sbjct: 426 QNAAKQLAQQALQLDPQLAEAHAALGDV-ALRSAWDFALG--ESELRRAIELDPHKSTYH 482

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +     +G    +  +   ++             A                      
Sbjct: 483 AWLASLLVYEGRFDEALSEIDRAVADDP-LWPLVYSMA---------------------- 519

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                    Y   ++ +    +  A +   +  +S ES   +          D+A A+  
Sbjct: 520 --------TYVAGMAHDNNQAIAFAQKYVSLVPDSPESHNQLGWAYFCAKHYDEALAEWG 571

Query: 350 LAMKIAPR-KEIFL 362
              ++      I L
Sbjct: 572 RMAEMDKDSARIAL 585


>gi|256421291|ref|YP_003121944.1| hypothetical protein Cpin_2252 [Chitinophaga pinensis DSM 2588]
 gi|256036199|gb|ACU59743.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
          Length = 954

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 24/260 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATK 179
           YLL            ++ E  E  ++  P   E   A+ S+Y    R G    A      
Sbjct: 176 YLLAGHYYQQRNNQLLSQENYEKALMLDPDNEEAKAAINSMYV---RSGSFTKAIEQVNA 232

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNRNRAILLIARSLENA 237
           AL I+P +  +    +       +++ AI  L Q  K   A    R+    L   +    
Sbjct: 233 ALAINPGSYELMMRKLGLLQDMHDYAGAIDQLQQILKRWPADAKARSTETTLRMEAAAWY 292

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IA 296
              D    Y    E       +  A        +S+   R+A   + +  K NP+ + + 
Sbjct: 293 ANTDPFLLYAGIAEKN---PGNREALDKVIGMSMSRGAYREALAWINRGLKNNPNDQRLL 349

Query: 297 NIYTHLLSENT--------VGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHA 346
           ++   +L  +           +L R       ++ S  S + ++  +  L     D A A
Sbjct: 350 SLKLDVLESDRKFAEAALLAERL-RYNNAGTADQRSRYSALKIASGRDYLAQQQYDLALA 408

Query: 347 KAMLAMKIAPRKEIFL-LLA 365
           +   A++  PR    + L+A
Sbjct: 409 EFDKALQTDPRDTTAMDLMA 428


>gi|194767414|ref|XP_001965811.1| GF13981 [Drosophila ananassae]
 gi|190625935|gb|EDV41459.1| GF13981 [Drosophila ananassae]
          Length = 396

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 71/218 (32%), Gaps = 18/218 (8%)

Query: 70  AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLV 122
             L +             GY  L   L++    ++  A + +    Q   +       L 
Sbjct: 137 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMESAVQAYITALQYNPELYCVRSDLG 194

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LL+        +   A       ++       A  +L       G++  A  +  KA+ 
Sbjct: 195 NLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 249

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+       +      A+ + RA+    +    +     N A++    +    ++G +
Sbjct: 250 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 305

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             +      +++L  N   A    A +L  + + ++AE
Sbjct: 306 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAE 343


>gi|171679509|ref|XP_001904701.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939380|emb|CAP64608.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1427

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 29/206 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQK 214
            +Y+ +    D   A+R   KA+++SP      E + + +    +W R    A   ++  
Sbjct: 582 GIYY-ADYAKDKKRARRCFQKAVELSPSEVLSAERLARSFADDGDWDRVELVAQRVVDSG 640

Query: 215 KKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K      ++ + I     +L  A+  K D   +      +L++  N   + +   +S   
Sbjct: 641 KVKPPPGSKRKGISWPFSALGVAELNKQDYHKAIVSFQAALRISPNDYHSWVGLGESYHG 700

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             +   A   L    K+   P+       +  + T                   +  I++
Sbjct: 701 SGRYIAATKALLNAQKLEESPD-----VEITGQETW-----------------FTRFILA 738

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358
           ++  E+G  D A       ++  P +
Sbjct: 739 EVKRELGDFDDAIDLYKQVLEDRPEE 764


>gi|29347261|ref|NP_810764.1| TPR repeat-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253571996|ref|ZP_04849401.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_6]
 gi|298387428|ref|ZP_06996980.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_14]
 gi|29339160|gb|AAO76958.1| TPR-repeat-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251838593|gb|EES66679.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_6]
 gi|298259635|gb|EFI02507.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_14]
          Length = 272

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 9/171 (5%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           S+A   L Q  K  +  N   A+L     L     G+   +      +L     ++   +
Sbjct: 38  SKAEELLLQALK-LEPKNAKNAMLFSNLGLVQRRLGEYDKALESYSFALNFAPLAVPILL 96

Query: 265 CAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEE 319
             A   +      +A      +L++  K N    +   Y + L  +    ++    RL E
Sbjct: 97  DRAAINLEMGNTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLE 154

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
           I+ +S    + ++ +  + G   +A       +   P    +++  A +E+
Sbjct: 155 IDPQSYSGRLGLATLEQKEGKFKEALEILNKMITATPEDATLYIARADVER 205



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 59/199 (29%), Gaps = 40/199 (20%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    +++   N   A   +  V  +   + E L  L+   I +  R Y  A      +L
Sbjct: 96  LDRAAINLEMGNTDRAYTDYCQVLDEDKQNKEAL--LMRAYIYVLRRDYPAARIDYNRLL 153

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +I          L     + G    A     K +  +P                      
Sbjct: 154 EIDPQSYSGRLGLATLEQKEGKFKEALEILNKMITATP---------------------- 191

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
                             A L IAR+    +      +  D  E+++L  +S  A +   
Sbjct: 192 ----------------EDATLYIARADVEREMKHEDLALVDLEEAIRLNPSSADAYLLRG 235

Query: 268 KSLISQNKKRKAEVILEKI 286
              ++Q KK  A++  EK 
Sbjct: 236 NIYLTQKKKALAKMDFEKA 254


>gi|86147458|ref|ZP_01065770.1| TPR repeat protein [Vibrio sp. MED222]
 gi|85834751|gb|EAQ52897.1| TPR repeat protein [Vibrio sp. MED222]
          Length = 334

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 16/129 (12%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y+AL    ++        A K+ S             + +LE      + ++ IA E  +
Sbjct: 164 YQALSQSEVA--------ALKVDSMSPASAFMG----IGVLE----DVDGKHQIAQEYFK 207

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             L I  T   A+ ++ +     G+   A +Y   AL+I P+       +   Y+ + + 
Sbjct: 208 KSLTIDKTSVKALLNMGYSHYMYGNYKEAYQYTRSALEIEPNNEKAQNNLALIYLASGDV 267

Query: 205 SRAITFLNQ 213
            +AI    +
Sbjct: 268 KKAINVFMR 276


>gi|116748131|ref|YP_844818.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697195|gb|ABK16383.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 626

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 79/262 (30%), Gaps = 27/262 (10%)

Query: 130 ALAERQYNIAHEKLE---MMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
              + + + A         + + P T          Y +  +  + ++A+    K     
Sbjct: 241 YQIQNKVDDALMVYLDLFKLSEEPETFKEFLQ----YIQKKKSKE-DAARFL-EKHQQHI 294

Query: 185 PDAPWVTEAVV--QQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLENADKGD 241
           P A   +  +         K W++A T   +  K   K+ +    + +  +  +  D   
Sbjct: 295 PKAFQSSLMLFLADLNTQTKNWAKAATSYEKAIKAGIKDPDVLYNLAVTYQQSD--DPDK 352

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIY 299
            I +    ++          + +   +    +    +A    E + + NP     +  + 
Sbjct: 353 AIQALEKYLQKN---PGDTKSWLQLGELQEKKGALTQARSTYEAMLQKNPQNREALVRLV 409

Query: 300 THLLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-- 356
             L      G L+ A  +L      +      +  +  +    D+A A     + + P  
Sbjct: 410 AILEKGKDKGALQAAYQKLAATQPRNKTIQHNLGVLYYDARKYDKAAACFEAVVALDPKD 469

Query: 357 -RKEIFLLLAQIEQANSHNTDK 377
                +LL   I +   ++   
Sbjct: 470 VESRKYLL--DIYRKQKNDKAA 489



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 78/248 (31%), Gaps = 26/248 (10%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            + ++  ++ P      +Y+L     +  D + A +   K L  +P        + +   
Sbjct: 324 EKAIKAGIKDPDV----LYNLAVTYQQSDDPDKAIQALEKYLQKNPGDTKSWLQLGELQE 379

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC--- 256
                ++A +      +   + NR   + L+A      +KG    +   A +  KL    
Sbjct: 380 KKGALTQARSTYEAMLQKNPQ-NREALVRLVA----ILEKGKDKGALQAAYQ--KLAATQ 432

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGK 310
             +               K  KA    E +  ++P  +      + +IY    ++     
Sbjct: 433 PRNKTIQHNLGVLYYDARKYDKAAACFEAVVALDPK-DVESRKYLLDIYRKQKNDKAATA 491

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQI 367
           +     L +++ ++      + K   +        A    A +  P       + L A +
Sbjct: 492 V--IQSLAQLDPKNTSYYDTIFKSYEQKKDYKGMAAFFRTASQQHPEMVALHNYALFAAL 549

Query: 368 EQANSHNT 375
           +  ++   
Sbjct: 550 KTGDNKGA 557


>gi|330506457|ref|YP_004382885.1| TPR repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328927265|gb|AEB67067.1| TPR repeat-containing protein [Methanosaeta concilii GP-6]
          Length = 250

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 45/133 (33%), Gaps = 13/133 (9%)

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R   +  +Y ES    D          A+ + P+            +    +  A   
Sbjct: 130 EGRLLQLQGMYEESVAKFDG---------AIALDPNYKEALYLKGITQMALGNYEDAKAL 180

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +Q       + +      + + L     G ++ +  +  ++L++      A I    +L
Sbjct: 181 FDQALVVDPNYKQ----AYLGKGLALHADGKLVEAQQEYDKALEIDPGYSSAKISKMHAL 236

Query: 271 ISQNKKRKAEVIL 283
           ++ NK R+A  +L
Sbjct: 237 MAMNKPREAFGML 249


>gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Acyrthosiphon pisum]
          Length = 1177

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 80/259 (30%), Gaps = 16/259 (6%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +  V  +        V L      L       A    E  +
Sbjct: 166 LGKACIAFNRKDFRGALAYYKKVL-RSNPQCPADVRLGMAHCFLKLGNAEKARLAFERAI 224

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           Q+ +    A+  L          GD+       +KA  I    P V   +   +   K++
Sbjct: 225 QLDSKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS 263
           ++    L +      E    RA      +     + +   ++    ++ +      ++  
Sbjct: 285 TK-YELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYYQATQFAPVTFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHLLSENTVGKLK-RAL 315
               +  I       A    EK+ K   HP        + ++Y +  ++      K    
Sbjct: 344 YGLGQMYIYGGDMENAAQCFEKVLKA--HPGNYEAMKILGSLYANSKNQQKRDIAKSHLK 401

Query: 316 RLEEINKESVESLVIVSKI 334
           ++ E   + VE+ + +++I
Sbjct: 402 KVTEHFPDDVEAWIELAQI 420


>gi|307252293|ref|ZP_07534190.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860215|gb|EFM92231.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 391

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 36/196 (18%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 84  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           ++  L     +  +   A   A K + I P                              
Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEP------------------------------ 173

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +  +   +      A++++N D    +++   A+E          ASI      ++QN+
Sbjct: 174 -DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALE---YSPQCARASILLGDYYLAQNQ 229

Query: 276 KRKAEVILEKIWKVNP 291
            + A    E+I + +P
Sbjct: 230 FQSALKNYERILQQDP 245


>gi|293373227|ref|ZP_06619589.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|292631875|gb|EFF50491.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|295085103|emb|CBK66626.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A]
          Length = 272

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 9/169 (5%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  K  +  N   A+L     L     G+   +      +L     ++   +  
Sbjct: 40  AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98

Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321
           A   +   K  +A      +L++  K N    +   Y + L  +    ++    RL E++
Sbjct: 99  AAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
            +S    + ++ +  + G   +A       +   P    +++  A +E+
Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALEILNKMLAATPEDATLYIARADVER 205



 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 6/166 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           + L    I +   + + A+    +++ +    +E  +   Y    R  D  +A+    + 
Sbjct: 94  ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L++ P +      +        ++  A+  LN+      E     A L IAR+    +  
Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMLAATPE----DATLYIARADVEREMK 208

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  D  E+++L   S  A +      ++Q KK  A+   EK 
Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254


>gi|292492667|ref|YP_003528106.1| hypothetical protein Nhal_2643 [Nitrosococcus halophilus Nc4]
 gi|291581262|gb|ADE15719.1| Tetratricopeptide domain protein [Nitrosococcus halophilus Nc4]
          Length = 387

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 81/222 (36%), Gaps = 21/222 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR- 223
            R G L+ A+    +AL            ++  Y   K WS+AI    Q  + + E    
Sbjct: 118 MRAGMLDRAESLFLEALKRKSHVGTALRQLLDIYQQEKNWSQAIAIAQQLHEESGEATGP 177

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      + +   +  ++ +     ++L      + A++  A   + Q+  + A   L
Sbjct: 178 MIAHFYCELAEQRWARKQIMEAAQFIKQALASDWRCVRATLLQAHLAMEQSDYKMAIRCL 237

Query: 284 EKIWKVNPH--PE----IANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL 336
            ++   +P   PE    ++  Y  L  ++          L E  +     + +I+++ A 
Sbjct: 238 RRVEGQDPDYLPEILKPLSECYQGLDRQDEF-----FSWLAEALERHPGCTPLILAQAAS 292

Query: 337 --EMGSIDQAHAKAMLAMKIAPR-KEIFLLLA-----QIEQA 370
               G  +++    +  ++  P  + +  LLA      IE A
Sbjct: 293 LRRQGEPEKSRRFLLEQLRQYPSVEGLQQLLALGVPKDIEAA 334


>gi|262305013|gb|ACY45099.1| acetylglucosaminyl-transferase [Machiloides banksi]
          Length = 289

 Score = 44.2 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++        H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVVEAEECYNTALHLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N             A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALHLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|255019396|ref|ZP_05291505.1| putative heat shock protein [Acidithiobacillus caldus ATCC 51756]
 gi|254971168|gb|EET28621.1| putative heat shock protein [Acidithiobacillus caldus ATCC 51756]
          Length = 381

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 111/341 (32%), Gaps = 35/341 (10%)

Query: 41  PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100
              +   L   L   + +F   R  L  P +    L+    D+  +A+   L ++     
Sbjct: 7   LVFLAGALGMALGLVVAVFWRPRRALLVPEVYVQGLNHLLSDRSDEAVEAFLEALR---- 62

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIPATREFAVY 158
                            +     +L    ++     +   A    + +L+ P        
Sbjct: 63  ----------------QHPESTDILMALGRLFRRRGELERALRVHQYLLEQPGLSLSLRQ 106

Query: 159 SLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +  E      + G LN A+    + L          +A+ + Y L  +W +A+    + 
Sbjct: 107 EVLLEIARDYLKSGILNRAESILKELLQRDDRYVDGLQALAELYELGADWPQAVAVRRRL 166

Query: 215 KKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           K   +E       L+    +     +GD+ A+     E+ ++  +S    I   +   ++
Sbjct: 167 KALGREGQEAIIALICGEMAEAAIGRGDVTAARQYLAEAREVDPDSPRTQIIEGRLAFAE 226

Query: 274 NKKRKAEVILEKIWKVNPHPEIANI---YTHLLS---ENTVGKLKRALRLEEINKESVES 327
               +A     ++     +P +  +   +   L    +    +  RA  L+    +   +
Sbjct: 227 GAWERAAGTWARLLDTGAYPALLLVVRPFLEALKRCLDQPSCRSWRARLLDRF--DDTLT 284

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
           +  V++  LE+   + A      A+       +  LL ++E
Sbjct: 285 VYRVAQALLEVDGTEAARDYLRRALNARKGLPVVQLLLRLE 325


>gi|104780453|ref|YP_606951.1| methyltransferase, CheR-like [Pseudomonas entomophila L48]
 gi|95109440|emb|CAK14141.1| putative methyltransferase, CheR-like [Pseudomonas entomophila L48]
          Length = 415

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 1/99 (1%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  + A        A    E  L+  A +    Y L   S   GD   A  +  KAL + 
Sbjct: 318 LIARHAN-TGDSEQARAGCERYLRQFAPKAQVYYWLGLLSDTEGDAAQAITHYRKALYLE 376

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           P  P     +        + + A     +  +  +E  R
Sbjct: 377 PQHPETLVHLAALLASQGDVAGARRLQERAARAGRESER 415


>gi|73538250|ref|YP_298617.1| TPR repeat-containing protein [Ralstonia eutropha JMP134]
 gi|72121587|gb|AAZ63773.1| TPR repeat [Ralstonia eutropha JMP134]
          Length = 271

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 37/132 (28%), Gaps = 8/132 (6%)

Query: 154 EFAVYS--LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
              +    L+  +      D   A+    +A+   P        +         ++ A+ 
Sbjct: 132 AVGLSGHELFEIAQEFEREDPEEAELAYRRAIAADPGLLDAYVNLGCLLCDRARYADAVD 191

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                 +   +    R       ++   D G   A+  +    + L  +   A   AA+ 
Sbjct: 192 LYRAALEQGLDGPLIR----FNLAVALEDSGYAEAALAEYHACIALAPDLADAHYNAARL 247

Query: 270 LISQNKKRKAEV 281
             +    ++A  
Sbjct: 248 HEAMGDHQRAIR 259


>gi|324509072|gb|ADY43822.1| Adenosine monophosphate-protein transferase FICD [Ascaris suum]
 gi|324510406|gb|ADY44351.1| Adenosine monophosphate-protein transferase FICD [Ascaris suum]
          Length = 480

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 271 ISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE----EINKESV 325
             +   RKAE I++    + P HP+I   Y  L+ E     L  A  L       N    
Sbjct: 131 RKKGNMRKAETIIQHALALAPNHPDILTEYGILV-ETVRKNLVEAEELYTRALSYNPHHT 189

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           E+LV  ++    +  ID    K + A++   RK  + L  +I + +      +  
Sbjct: 190 EALVRRARTLPLVEEID---KKMLKALR---RKRAYFL--RIPRNSPALKRAMRE 236


>gi|325127986|gb|EGC50885.1| tetratricopeptide repeat protein [Neisseria meningitidis N1568]
          Length = 612

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 356

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 357 YTKVRQWLKK-VSAP 370


>gi|313157652|gb|EFR57065.1| clan AA aspartic protease, TIGR02281 family [Alistipes sp. HGB5]
          Length = 686

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 25/84 (29%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             QI    + Y  A      ML+     + A+  L        + ++A     K      
Sbjct: 147 RAQIYYDLKDYANADADYRQMLKHDEADQVAMIGLIRNMIARKEYDAALELVNKCEKYDT 206

Query: 186 DAPWVTEAVVQQYVLAKEWSRAIT 209
           D        +Q Y    E  +AI 
Sbjct: 207 DYDETYRFRMQIYDKTGEVDKAID 230


>gi|307634697|gb|ADI83237.2| lipoprotein, putative [Geobacter sulfurreducens KN400]
          Length = 696

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 72/208 (34%), Gaps = 14/208 (6%)

Query: 97  AHNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           A +     K+              +  +  L    A    +          +      R 
Sbjct: 430 AGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADL-GRIKEEVGLYANLAIREQNRV 488

Query: 155 FA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAI 208
           +A      +  ++ ++GD    ++ A + ++  P  PWV     +   +     ++ R +
Sbjct: 489 YAPELYRRILHDAEQLGDPTLMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVV 548

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMIASYHDAIESLKL----CDNSIMAS 263
             L+    +        ++  + +SL+ + ++ D   +    +  L+        +  AS
Sbjct: 549 GRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAMLLFLAELRRREMSSPLAADAS 608

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291
             AA + +S+  ++ A+ IL    + +P
Sbjct: 609 YVAATARLSRGDRKGAKEILRAAGEASP 636


>gi|115452873|ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
 gi|108708021|gb|ABF95816.1| expressed protein [Oryza sativa Japonica Group]
 gi|113548508|dbj|BAF11951.1| Os03g0336000 [Oryza sativa Japonica Group]
 gi|125543773|gb|EAY89912.1| hypothetical protein OsI_11461 [Oryza sativa Indica Group]
 gi|215712300|dbj|BAG94427.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 545

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 60/213 (28%), Gaps = 33/213 (15%)

Query: 52  LFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAH-------NIPLAR 104
           +   I+L A+ R             +KR    G++A    L ++A         N+    
Sbjct: 341 ISFSIVLQALLRA---GETSAAWQAYKRMERAGFEADGRALDTLARGLCRQCAANVAALA 397

Query: 105 KMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQI----------PAT 152
                  +     +E +   Y L  Q      + + A   L  M +              
Sbjct: 398 DAREVFGKLVASGHEPVSYTYCLMAQALARGGEVDAAVSLLGEMARRGYALRKRAYTDVV 457

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           R         ++ R+  L  A+ +        P      +A++ +      W  A+    
Sbjct: 458 RALCERGRARDALRVLALVIARDFV-------PGRN-AFDALLGELARQGRWPDAMAVYA 509

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              K     +  R       +L   ++ +   S
Sbjct: 510 AAVKRGVLVSLKR---HSKEALLVQEQTETRES 539


>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1417

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 65/167 (38%), Gaps = 12/167 (7%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           ++    +  +  A+ + N+        N   A   +  + E  DK D   +     + + 
Sbjct: 17  LEFQ-ESGNFDEAVEYFNRVL--NINLNHEDANYNLGFTYEKQDKLD--QALECYKKVIS 71

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGK 310
           +  + I A +  A+   +Q+   ++   LEK  +++  P  A  Y  L     ++N + +
Sbjct: 72  INPSYIKAYVSIARVYFNQDNLDESIKFLEKAIEID--PNYAEAYERLGWVYENQNLIDQ 129

Query: 311 -LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +    +  EI+   ++S   +  +    G ID+        ++I P
Sbjct: 130 AIDSYKKAIEIDPNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDP 176


>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 379

 Score = 43.8 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 8/171 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKA 180
           +L   + +L + +Y  A ++    +   P   E   Y+ +     +      A     K 
Sbjct: 19  HLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKR--PEKALECYEKI 76

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L  +P                  +  A+    +  K   ++    A     ++L   + G
Sbjct: 77  LKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKY----AGAWNNKALVLKELG 132

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               +     ++L++      A       LI   K +KA    EK  ++NP
Sbjct: 133 RYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNP 183



 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 4/124 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G  + +     KAL I+P                  +  A+    +  +   E ++    
Sbjct: 234 GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDK---- 289

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               + L   + G    +     ++L++      A       L    K  ++    +K  
Sbjct: 290 TWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKAL 349

Query: 288 KVNP 291
           K+NP
Sbjct: 350 KLNP 353


>gi|307107432|gb|EFN55675.1| hypothetical protein CHLNCDRAFT_133909 [Chlorella variabilis]
          Length = 637

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 24/251 (9%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             Q+A  +R  ++A +   M           R+    ++  ++   G  N+  R A  A 
Sbjct: 141 AAQVAAGQRDASVALQAWGMFESDQGRRQEARQLLQRAVAADARHAGAHNALGRLAESAG 200

Query: 182 DI-------------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            +              P      +A+          ++A        +       + A L
Sbjct: 201 QLAAAAAHFQAAIAAEPKHAPSLQALALLEAKRGRLAKAQRLFGAAVQACP----SNAQL 256

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
             A +L    +G+  A+    +E  + C          AK    +     A  +  K  +
Sbjct: 257 YQAWALMEWRQGNYGAAKRLFLEGEEECLPHAPLLAGHAKMEAQRRNIAAARRLYRKALQ 316

Query: 289 VNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           V+P HP+  +        S NT   ++  LR  +    ++  L  ++ + +++G    A 
Sbjct: 317 VDPGHPQSILGLGQLEARSGNTDAAMQLYLRGLQAQPRNMHLLSSLAHLHVQLGDQQAAR 376

Query: 346 AKAMLAMKIAP 356
                 +++ P
Sbjct: 377 GVWRRLVEVEP 387


>gi|254429829|ref|ZP_05043536.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
 gi|196195998|gb|EDX90957.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
          Length = 137

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 42/95 (44%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++ + GD + A+RY  +AL+I+PD+ W+ + +    +   +   A  F  +  + A +  
Sbjct: 37  QARQQGDNSRAERYLERALNIAPDSSWLYKQLADLRLTEGDARGAEGFALKALRLAPDHP 96

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             +A L    +     +GD   +      +  L D
Sbjct: 97  EYQAGLWELVATARDRQGDAAGAKAARERAATLRD 131



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 8/119 (6%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           + Q    +  L  L   + A  +   + A   LE  L I     +    L       GD 
Sbjct: 19  ASQELDGSPALSLLTSAEQARQQGDNSRAERYLERALNIAPDSSWLYKQLADLRLTEGDA 78

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             A+ +A KAL ++PD P     + +    A++         Q      +  R RA  L
Sbjct: 79  RGAEGFALKALRLAPDHPEYQAGLWELVATARD--------RQGDAAGAKAARERAATL 129


>gi|329902583|ref|ZP_08273145.1| hypothetical protein IMCC9480_461 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548730|gb|EGF33372.1| hypothetical protein IMCC9480_461 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 1326

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 10/165 (6%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + A   +  A  +              L  LL+   A      ++    ++       T 
Sbjct: 543 AAAFAELERAGAVAPVSDGDFWRAYAELAMLLQNDAAARTGLRSLLAGDIQN--DNDLTN 600

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              +         +    +A + A  A     +     +A +       +W+ A   L +
Sbjct: 601 LIGL-------LEVSQPLAAAQLAEFAYASKGNPRTALQA-LNLRARLADWAGARALLAR 652

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                +         L  R+       D+  +  D   +L L  N
Sbjct: 653 LTPEQRRLLEQDPAFLTLRASIAQSGNDLDGALRDMRAALALRPN 697


>gi|262305029|gb|ACY45107.1| acetylglucosaminyl-transferase [Pedetontus saltator]
          Length = 289

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++        H + L  L    I   +     A     + +   P     A
Sbjct: 34  GQVVEAEECYNTALHLCPTHADSLNNL--ANIKREQGYIEEATRLYVKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ I P        +       ++   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +        +   A    N             A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALHLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYIEEATRLYVKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|268315734|ref|YP_003289453.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
 gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 465

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 31/188 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A E  E +L+I        Y++      + +  +A +Y   AL+  P        
Sbjct: 256 GDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYG 315

Query: 194 VVQQYVLAKEWSRAITFLNQK------------KKNAKEWNRNRAILLIA---------- 231
           +   Y   + +  AI  + +              K   E+N  R    +           
Sbjct: 316 LGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDP 375

Query: 232 --------RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                    +    + G +  +     ++L L  ++  A I  A++L++  +  +    L
Sbjct: 376 QNRDAWLDYAETLLEAGYVEEALQAYRQALTLNPDAR-AYIRQARALLALGRSEEGIRSL 434

Query: 284 EKIWKVNP 291
           +   +++P
Sbjct: 435 KMALRLDP 442


>gi|213962696|ref|ZP_03390957.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
           Capno]
 gi|213954691|gb|EEB66012.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
           Capno]
          Length = 447

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 29/228 (12%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                 +   +Y L     L    Y  A       L+       A+  L F    +GD+ 
Sbjct: 121 ALTLTDDASNIYALIAMEYLYVEDYTNAKNYFIRCLEQDPQDYTALQQLVFCYEVLGDVQ 180

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A  +    LD +P        + + Y+   ++  A+  L+    +   +    A    A
Sbjct: 181 EATSFLNHYLDQNPYCEVAWYYLGRLYLAIGDYKNALRCLDFAIISDDTFTG--AYFEKA 238

Query: 232 RSLENADKGDMIASYHDAIESLK----LCDNSIMASICAAKSLISQNKKRKAEVI----- 282
           R LE  +       Y  AIE+ K    L D S +A +   +     +   KAE       
Sbjct: 239 RVLEMMED------YEKAIENYKITLTLDDPSALAYLHIGRCYEKMHNDTKAEEYYFRAT 292

Query: 283 -----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
                L+K W       +A+ Y    + +    LK   ++        
Sbjct: 293 HEDPQLDKAWIT-----LADFYYLRHNHSKA--LKYIQKVLTFEPNEP 333


>gi|197120079|ref|YP_002140506.1| glycosyltransferase [Geobacter bemidjiensis Bem]
 gi|197089439|gb|ACH40710.1| glycosyltransferase, TPR domain-containing protein [Geobacter
           bemidjiensis Bem]
          Length = 616

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 97/307 (31%), Gaps = 24/307 (7%)

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAA---HNIPLARKMHSYVSQQHTFHNEYLVYL 124
            P      L +        A+    ++  +        A K +          + YL  L
Sbjct: 313 DPQRAAAALREHLARFPKHAMAHNDLAAVSYQLGEKEQALKHYREAVWLDPKESVYLKNL 372

Query: 125 LEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
               I   E  + + A      +L+        + +L      +G    A  +  +AL+I
Sbjct: 373 --ADILFVEAGEADEAIAIYLKLLEQSPRDVETLLNLGIICESVGQPAEADSFYQRALEI 430

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P   W   A  Q   L +           +   A E +   A     RS E   +GD+ 
Sbjct: 431 EP---WNQAARQQLTALRQR------TEEPQSAAAPEEDDLCAEDRYQRSQELVSQGDLD 481

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298
            ++ +  + L    +   A    A     Q  K +A    EK  ++ P        +A+ 
Sbjct: 482 GAFQELKQILSSYPDFAPAHNDLAVLAYQQGDKEQARAHYEKAAELAPENGTFQKNLADF 541

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-- 356
           Y  +   +  G +   L       +++E+L+ + KI   +    +A +     + + P  
Sbjct: 542 YF-VEGYDVDGAIAIYLEQLRREPKNIETLMGLGKICTMLDRPTEAQSFYGKVINLEPWN 600

Query: 357 -RKEIFL 362
                 L
Sbjct: 601 RDARDCL 607


>gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score = 43.8 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 12/234 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A       +++     +A Y+       +GD   A     KA+ I+P        
Sbjct: 398 GDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADYNKAIAINPQLAETYSN 457

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                 +   +  AI   N+  +   ++    A   + R +   D  D   +  D  +++
Sbjct: 458 RGGIKRVLGNYQGAIADFNKAIEINPQY----APAYMNRGIAKYDLKDYQGAIADYSKAI 513

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTV 308
            +     +A    + +       + A   L +  ++N  P+ A+ +     T     +  
Sbjct: 514 TINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEIN--PQFADAFNNRGATKYELGDHQ 571

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIF 361
           G +    +   IN +  E+      I   +G+   A A    A++I P     +
Sbjct: 572 GAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEIDPQYASAY 625



 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 75/230 (32%), Gaps = 32/230 (13%)

Query: 152 TREFAVYSLYF-------ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           T+  A+ S              + D   A     KAL+I+P      E         K++
Sbjct: 307 TQALALRSSMRGYFLRAYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDY 366

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             AIT  N+      E N         R L   + GD   +  D  ++++L         
Sbjct: 367 QGAITDYNKAI----EINPQHTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQH----- 417

Query: 265 CAAKSLISQNKKRK-------AEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLK 312
             A +  ++   +K       A     K   +N  P++A  Y++         N  G + 
Sbjct: 418 --AYAYYNRGIVKKNLGDYQGAIADYNKAIAIN--PQLAETYSNRGGIKRVLGNYQGAIA 473

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
              +  EIN +   + +       ++     A A    A+ I P+  I  
Sbjct: 474 DFNKAIEINPQYAPAYMNRGIAKYDLKDYQGAIADYSKAITINPQHAIAF 523


>gi|307256760|ref|ZP_07538539.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306864808|gb|EFM96712.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 338

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 36/196 (18%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 31  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 90

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           ++  L     +  +   A   A K + I P                              
Sbjct: 91  SLTQLMTVYQKTKEWKKAINVAEKLIKIEP------------------------------ 120

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +  +   +      A++++N D    +++   A+E          ASI      ++QN+
Sbjct: 121 -DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALE---YSPQCARASILLGDYYLAQNQ 176

Query: 276 KRKAEVILEKIWKVNP 291
            + A    E+I + +P
Sbjct: 177 FQSALKNYERILQQDP 192


>gi|300864449|ref|ZP_07109320.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300337593|emb|CBN54468.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 293

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 44/144 (30%), Gaps = 14/144 (9%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +L  Q          A +    +L +      A+  L     +     +A       L  
Sbjct: 118 ILLAQAKEYAGDREGAAQAYRSVLTVAPGDVKALQGLVNLLLKQQRPEAAIGLLQDTLKA 177

Query: 184 ----------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                     S D   V   + Q Y   K +  AI   ++  K   +    R +L  A++
Sbjct: 178 APAANQAKAGSVDVTSVQLILGQVYAEQKRFDEAIVIYDEGIK--ADAKDFRPVL--AKA 233

Query: 234 LENADKGDMIASYHDAIESLKLCD 257
           +   ++G    +     ++ +L  
Sbjct: 234 IVLREQGKTEDAEGLFNKATELAP 257


>gi|284051363|ref|ZP_06381573.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 270

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 64/218 (29%), Gaps = 30/218 (13%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           N      M +Y        N+ + Y    Q+      ++ A    +  + +        Y
Sbjct: 51  NGQFIAAMGAYTKAFELAPNQPISYAYLAQVYRNMGWFDEAISFYQQAIDLSPNWADLHY 110

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L       G++  A     KA+ ++P        +  +     + + AI  L + + N 
Sbjct: 111 HLGMTWHWQGNIEGAIGCYQKAIALNPKLGEAYLDMALRLNERGDINTAIKVLQEGRINC 170

Query: 219 KEWNRN---------------RAILLIARSLEN---------------ADKGDMIASYHD 248
             +                   AI +   +L                 A +G +  +   
Sbjct: 171 PNFKEIFNTLGYLQLQQNQIDEAIAIFQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAA 230

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +++ L  +  +A     K    +N  R+A    +K 
Sbjct: 231 YHKAISLKPDLAIAYSNLGKLWQHKNNHRQAITYFQKA 268


>gi|254466985|ref|ZP_05080396.1| hypothetical protein RBY4I_3596 [Rhodobacterales bacterium Y4I]
 gi|206687893|gb|EDZ48375.1| hypothetical protein RBY4I_3596 [Rhodobacterales bacterium Y4I]
          Length = 571

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 81/284 (28%), Gaps = 40/284 (14%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY- 176
           +  +  LLE    +     + A +  + M +  + + F +Y         GD   A+   
Sbjct: 126 HPLVDGLLEGWAHIGTGSVSSALKTFDRMAEDSSLKPFVLYHRALALASAGDYGGAEALF 185

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---------------LNQKKKNAKEW 221
           A +   ++  +     A VQ        + A                  L+ + ++ K  
Sbjct: 186 AAEDGRLASLSRRAAVARVQILSQLGRNAEARETLQAAFGSRLDPGLEALDAQLRDGKTL 245

Query: 222 NRNRA---------ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
               A         +     +  N D  +       A  +  L  + + A + +A  L  
Sbjct: 246 AYTIAPGPREGIAEVFFTLGAALNGDTAN-DYVLMYARMAASLRPDHVDAILLSASLLDQ 304

Query: 273 QNKKRKAEVILEKIWKVNP--HPE-----IANIYTHLLSENTVGKLKRALRLEEINKESV 325
               R    +    +K  P  HP+     +        +      ++   +L     +  
Sbjct: 305 LG--RYELSV--ATYKQVPRSHPDYHAAELGRAEALRRAAKPDAAIEVLEQLARQFPQQP 360

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQ 366
              V +  +  +      A      A+   P       FLL A+
Sbjct: 361 GVYVSLGDLLRQQEDYAGAARAYDKALANTPEDDSSRWFLLYAR 404



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 2/187 (1%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           M++ ++      +   + LL   +     +Y ++    + + +       A         
Sbjct: 279 MYARMAASLRPDHVDAI-LLSASLLDQLGRYELSVATYKQVPRSHPDYHAAELGRAEALR 337

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R    ++A     +     P  P V  ++       ++++ A    ++   N  E + +R
Sbjct: 338 RAAKPDAAIEVLEQLARQFPQQPGVYVSLGDLLRQQEDYAGAARAYDKALANTPEDDSSR 397

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILE 284
             LL AR + +        +  D   SL L  +     +      +  ++K  +A  ++E
Sbjct: 398 WFLLYARGICHERLNQWEQAEADFRASLALEPDRPQVLNYLGYSLVEKRSKLDEALNMIE 457

Query: 285 KIWKVNP 291
           +     P
Sbjct: 458 RAVAARP 464


>gi|225431952|ref|XP_002272572.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296083248|emb|CBI22884.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 64/230 (27%), Gaps = 20/230 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVY----LLEVQIALAERQYNIAHEKLEMMLQIPATR 153
            NI  AR  H              +Y    LLE +      ++  A    +   +     
Sbjct: 262 GNIKKAR--HLLAKGLKYGGGNEYIYQTLALLEAKA----NRHEQARYLFKQATKCNPKS 315

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFL 211
             +  +      +  + ++A++   KA+  SP   +      V +  +   +        
Sbjct: 316 CASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFAWHVWGVFEANLGNAD------VG 369

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K     N    +LL + +L          S      + +L        I       
Sbjct: 370 RKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRRASELDPRHQPVWIAWGWMEW 429

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE 319
            +     A  + ++   ++   E A          E   G L  A RL  
Sbjct: 430 KEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAGNLSAARRLFR 479


>gi|87310263|ref|ZP_01092394.1| hypothetical protein DSM3645_27583 [Blastopirellula marina DSM
           3645]
 gi|87287012|gb|EAQ78915.1| hypothetical protein DSM3645_27583 [Blastopirellula marina DSM
           3645]
          Length = 830

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 106/314 (33%), Gaps = 40/314 (12%)

Query: 91  GLMSIA----AHNIPLARKMHSYVSQQHTFHNEYLVYL---LEVQIALAERQYNIAHEKL 143
           GL +      A ++  A + +  +    +     L  L   L  Q      +   A   L
Sbjct: 5   GLQAAFQLHRAGDLAAAERTYRQILIDTSKDLNVLHLLGLNLHEQ-----GKDREAVVFL 59

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV----VQQY- 198
           E  ++I  T      SL      +GDL  A+    KA+ +          +    ++   
Sbjct: 60  EKAVEIGPTIGVLYNSLGVVRMALGDLRVAESCFRKAISLDSVCEEARRNLAAVSLKLQG 119

Query: 199 ---------------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                              +  +A   L Q+    +  +   A + +AR     ++G   
Sbjct: 120 QTSVPQSPMASSRSTAAIGDSEQAEQILRQRL--GEFPDDLNAYIELAR--HWMERGKTR 175

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YT 300
                  E ++    S+  +    ++L  +N+  +AE I ++  +  P    A+I    +
Sbjct: 176 EVIDLLSEPVERFPQSMELANRLGEALGRENRHDEAEKIFQRHLERFPESVTAHINYGVS 235

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            L  E T   +    R  E+N E   +  ++     +    D A      A+++ P    
Sbjct: 236 QLAQERTSQAVSSFERALELNPECFRAQFLIGIAWRQSQQYDAAEMALQKALELQPGSSE 295

Query: 361 FLL-LAQIEQANSH 373
            L+ LA +E+   +
Sbjct: 296 ALVELAHLERLRGN 309



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 87/280 (31%), Gaps = 34/280 (12%)

Query: 131 LAERQYNIAHEKLEMMLQ-IPAT-REFAVYSLY-FESCRIGDLNSAQRYATKALDISPDA 187
           LA+ + + A    E  L+  P   R   +  +   +S +      A +   KAL++ P +
Sbjct: 237 LAQERTSQAVSSFERALELNPECFRAQFLIGIAWRQSQQYDAAEMALQ---KALELQPGS 293

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                 +     L     + +  L        + +      L+  +       D      
Sbjct: 294 SEALVELAHLERLRGNLQKGLETLTAIL----DRDPCHGPALLGLATCCETLSDPDLVVQ 349

Query: 248 DAIESLKLCDNSIMASIC-------------AAKSLISQNK--KRKAEVILEKIWKVNPH 292
             +++LK       A +               A+  +++ +    +A + L    K  P 
Sbjct: 350 YCVKALKANAKFAPAHLLLGMVLASRLTPDKRARLELAEREELGERALLHLSSAAKFAPS 409

Query: 293 PEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            E    +    +        L +      +      +   + +I LE G ID A A    
Sbjct: 410 AEAMEAWGSALINMGRHAEALGKIEESIRLVPVFAPAHESLGRIYLEQGRIDDACAAFSA 469

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNT-----DKILYWTQSA 385
           A+++ PR+ +     ++ ++   +       ++       
Sbjct: 470 AVRLDPRRALAQF--ELARSKKVDDVPRSIQQVRALLARG 507



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 59/216 (27%), Gaps = 22/216 (10%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +     A        +     +E LV L    +           E L  +L        A
Sbjct: 273 SQQYDAAEMALQKALELQPGSSEALVEL--AHLERLRGNLQKGLETLTAILDRDPCHGPA 330

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVT-----------EAVVQQYVLA 201
           +  L      + D +   +Y  KAL      +P    +             A ++     
Sbjct: 331 LLGLATCCETLSDPDLVVQYCVKALKANAKFAPAHLLLGMVLASRLTPDKRARLELAERE 390

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           +   RA+  L+   K A       A           + G    +     ES++L      
Sbjct: 391 ELGERALLHLSSAAKFAPSAEAMEA-----WGSALINMGRHAEALGKIEESIRLVPVFAP 445

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           A     +  + Q +   A        +++P   +A 
Sbjct: 446 AHESLGRIYLEQGRIDDACAAFSAAVRLDPRRALAQ 481


>gi|262304945|gb|ACY45065.1| acetylglucosaminyl-transferase [Aphonopelma chalcodes]
          Length = 289

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++   +    H + L  L    I   +     A     + +   P     A
Sbjct: 34  GLVTEAEECYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPEF-AAA 90

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G LN A  +  +A+ ISP        +        +   A+   ++  +
Sbjct: 91  HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +          + A    N   +         A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVTEAEECYNTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGFIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188



 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%)

Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +    AL + P        +            A     +  +   E+    A      
Sbjct: 39  AEECYNTALRLCPTHADSLNNLANIKREQGFIEEATRLYLKALEVFPEF----AAAHSNL 94

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +     +G +  +     E++++      A      +L      + A     +  ++NP 
Sbjct: 95  ASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQINPA 154

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               H  +A+I  H  S N    +       ++  +  ++   ++
Sbjct: 155 FADAHSNLASI--HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 197


>gi|170032363|ref|XP_001844051.1| mitochondrial precursor protein import receptor [Culex
           quinquefasciatus]
 gi|167872337|gb|EDS35720.1| mitochondrial precursor protein import receptor [Culex
           quinquefasciatus]
          Length = 575

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 1/123 (0%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAV 157
              L + M ++      F +    Y L  Q+   +++Y+ A    E   +  P   +  V
Sbjct: 413 EGALMKVMRAFREAIDRFPDCVECYSLMAQVLSDQQEYHEADNFFEKATKIEPENAQILV 472

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           +    +    GD+ SA +   KA+ I     +  E +    V   +   AI       + 
Sbjct: 473 HKALLQLQWKGDVESAVQLIEKAIAIDDKCEFAYETLGTIQVQRGKLQEAIKLFESAIQL 532

Query: 218 AKE 220
           AK 
Sbjct: 533 AKT 535


>gi|162453991|ref|YP_001616358.1| TPR domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161164573|emb|CAN95878.1| TPR domain protein [Sorangium cellulosum 'So ce 56']
          Length = 310

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 4/156 (2%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            L   +    + +       L +L+  +I LA R+ + A E  E    +  +    +  L
Sbjct: 56  RLGAALIEAQTARGLAPESPLAHLVLGRILLAHRRPSEAREHFETARGLDPSEPAPLRGL 115

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                     + A    T+AL++ PD      A+   ++       A     +  + A E
Sbjct: 116 AAVERYQDRDDRAAELLTQALELDPDDIETLVALGDAHLARGRVDEA----ERWARAALE 171

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                A  L+        +GD+  +   A+ +++  
Sbjct: 172 AEPEHADALVLMGHVLLRRGDVSGAREHAVWAIRAD 207



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 6/154 (3%)

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW---KVNPHPEIANIYT 300
           A+  +A  +  L   S +A +   + L++  +  +A    E         P P       
Sbjct: 59  AALIEAQTARGLAPESPLAHLVLGRILLAHRRPSEAREHFETARGLDPSEPAPLRGLAAV 118

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
               +      +   +  E++ + +E+LV +    L  G +D+A   A  A++  P    
Sbjct: 119 ERYQDRDDRAAELLTQALELDPDDIETLVALGDAHLARGRVDEAERWARAALEAEPEHAD 178

Query: 361 FLLLAQIEQANSHNTDKILY---WTQSALHAMPD 391
            L+L         +         W   A  + PD
Sbjct: 179 ALVLMGHVLLRRGDVSGAREHAVWAIRADVSDPD 212


>gi|120612096|ref|YP_971774.1| type 12 methyltransferase [Acidovorax citrulli AAC00-1]
 gi|120590560|gb|ABM34000.1| Methyltransferase type 12 [Acidovorax citrulli AAC00-1]
          Length = 436

 Score = 43.8 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 66/210 (31%), Gaps = 41/210 (19%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +   +  +A   LN+ ++      R   +      L     G++  ++     ++ L  
Sbjct: 21  QIARGDLQQAALTLNKAQRTQPNDPRVFMLA----GLMAEKAGNIPKAFDGLRRAVTLAP 76

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----------------HPEIANIY- 299
           +     +  A     QN+ R+A  + EK+    P                 H E+A  + 
Sbjct: 77  DWGPGQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVVDIAHRAGHLEMAVRHL 136

Query: 300 ---THLLSENTVGKLKRALRLEEI----------------NKESVESLVIVSKIALEMGS 340
                ++  +   +   A  L ++                N +  E+ +   K  +  G+
Sbjct: 137 RRGLEMVPGDVQLRRLLARDLSDLGQHAESLQVWGALIDENPQDTEARLGRVKACIAAGT 196

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
             QA A     M++AP   +      I   
Sbjct: 197 PAQAVADTTALMELAPGDSVVAYYTAIAHG 226


>gi|218248025|ref|YP_002373396.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8801]
 gi|218168503|gb|ACK67240.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8801]
          Length = 1252

 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 91/263 (34%), Gaps = 31/263 (11%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
                 A E    +L        ++Y L   + +IG+ + A++     L + P +     
Sbjct: 638 ANDLTGAKEAYNRILARETKHPDSLYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWM 697

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           ++   Y   K++S+AI    Q          N   +          +     +     ++
Sbjct: 698 SLGNLYQEKKQFSQAINAYQQAL----FLEPNLVAVYNNLGYVLQQQSQWEEAISCYQKA 753

Query: 253 LKLCDNSIMASICAAKSLISQNK------KRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
           L++  N + A I  A  L SQNK       + A++ L+   K      +A          
Sbjct: 754 LEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA-------- 805

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLA 365
               ++   +  ++  ES E    +     + G +++A A    A+ + P++   +  L 
Sbjct: 806 ----IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861

Query: 366 QIEQANSHNTDKILYWTQSALHA 388
           QI Q  +          + A  A
Sbjct: 862 QIYQVQNQ--------LKKASSA 876


>gi|83646794|ref|YP_435229.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83634837|gb|ABC30804.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 378

 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 8/177 (4%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A ++   V  Q   + E L   ++   +L     + A +  + M+Q          
Sbjct: 175 DFDKAIRVAEEVLAQEPDNAEALG--VKAYCSLNALDLSTAAQSFDAMIQAKPKSGRGWV 232

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                  + GDL +A+    K L+  P        +    +L      A   L +  +  
Sbjct: 233 GKGLLEMQQGDLAAAEGALKKGLENMPGHIGSWNVLAWCQILQGRMQEAEESLRRASEID 292

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             +      L + ++L +    D   +   A ++ +L  +S       A++L  Q +
Sbjct: 293 DRFGETYGALAVIKALTH----DYAEARLLARKATRLDKDSFSG--HFARALCDQGE 343


>gi|83720331|ref|YP_441035.1| TPR domain-containing protein [Burkholderia thailandensis E264]
 gi|83654156|gb|ABC38219.1| TPR domain protein [Burkholderia thailandensis E264]
          Length = 606

 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 9/246 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180
            +L  ++AL       A++    + +       A  +  +   +    D  +A     + 
Sbjct: 80  QVLAAEVALQRNLPAPAYQTYLALARDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 138

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              SPD+    +      VL  + + A   L Q+   A   NR +AI+ +   L  A   
Sbjct: 139 --YSPDSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDNRGQAIIALQALL--ARGP 194

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           + +       + LK   N   A +  A+  ++ + K  A   L++  ++ P    A +  
Sbjct: 195 NRVGGLTVLQDLLKNDMNRPEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 254

Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +        +    +  + N +S +  + ++++ L    +D A  +   AM+     +
Sbjct: 255 SQMGPGERAAGIASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQF-DAMRRNDSSD 313

Query: 360 IFLLLA 365
              L+A
Sbjct: 314 PTPLMA 319



 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 78/242 (32%), Gaps = 43/242 (17%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q+ LA+ + + A ++ + M +  ++    + ++     +   L+ A  Y  + + 
Sbjct: 283 RLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVK 342

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++                             +KK   +  +    L    +    D+ + 
Sbjct: 343 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNNE 369

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEI 295
             +     +  +     + A +  A+ L  Q K  +A  +L  +   +PH        + 
Sbjct: 370 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQVSDPHDAAVIARTDA 429

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + ++     +    +L +A    E   +  +     +    ++G       +  L M+  
Sbjct: 430 SILFASRRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRAQ 486

Query: 356 PR 357
           P 
Sbjct: 487 PD 488


>gi|315633769|ref|ZP_07889059.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter
            segnis ATCC 33393]
 gi|315477811|gb|EFU68553.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter
            segnis ATCC 33393]
          Length = 1520

 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 74/251 (29%), Gaps = 33/251 (13%)

Query: 162  FESCRIGDLNSAQRYATKALDISPDAPWV--------TEAVVQQYVLAKEWSRAITFLNQ 213
             E+ RI     A R A +A                   +A ++   +AKE   A      
Sbjct: 943  IEAERIAKEKEAARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEDARLAEEA 1002

Query: 214  KKKNAK--EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----- 266
            +++     E  R          LE             A E+ +     + A   A     
Sbjct: 1003 RQRELARLEAERIAKEKEEQARLEAERIAKEKEEARLAEEARQRELARLEAERIAKEKEE 1062

Query: 267  -AKSLISQ-NKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-------TVGKLKRALRL 317
             A+    +  K+++   + E+  +     E+A +    +++           ++ +    
Sbjct: 1063 QARLEAERIAKEKEEARLAEEARQ----RELARLEAERIAKEKEEQARLEAERIAKEKEA 1118

Query: 318  EEINKESVESLVIVSKIA-LEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH 373
              + +E+ +  +   +   +     +QA  +A    K    +       +  + E+A   
Sbjct: 1119 ARLAEEARQHELARLEAERIAKEKEEQARLEAERIAKEKEEQARLEAERIAKEKEEARLA 1178

Query: 374  NTDKILYWTQS 384
               +       
Sbjct: 1179 EEARQRE-LAR 1188


>gi|218661993|ref|ZP_03517923.1| TPR repeat-containing protein [Rhizobium etli IE4771]
          Length = 592

 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 10/154 (6%)

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             G+   ++  AIE        + A++  A   + Q + ++A+  ++    ++P  +IA 
Sbjct: 18  ANGEAEKAFKKAIELDPQDP-LLRANL--AILYLDQGRMKEAKREIDTAIALDPSFDIAL 74

Query: 298 IYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSKIALEMGSI---DQAHAKAMLA 351
           +        T  + K    L      N    +S ++++    E G      QA   A   
Sbjct: 75  LARGRYYLQTGDRDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRL 134

Query: 352 MKIAPRKEIFLLLAQIEQAN-SHNTDKILYWTQS 384
            K  P    F     I+  +          + + 
Sbjct: 135 DKNDPVISAFRTAVDIDDYDADGAIRNAQEYLRR 168



 Score = 43.4 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 52/159 (32%), Gaps = 6/159 (3%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A     +  K A E +    +L    ++   D+G M  +  +   ++ L  +  +A +
Sbjct: 16  RDANGEAEKAFKKAIELDPQDPLLRANLAILYLDQGRMKEAKREIDTAIALDPSFDIALL 75

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEIN 321
              +  +    + KA   L      NP    + +           ++     L   + ++
Sbjct: 76  ARGRYYLQTGDRDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLD 135

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           K     ++   + A+++   D A      A +   R   
Sbjct: 136 KNDP--VISAFRTAVDIDDYD-ADGAIRNAQEYLRRSRA 171



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 6/151 (3%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A +  +  +++         +L       G +  A+R    A+ + P       A  + 
Sbjct: 21  EAEKAFKKAIELDPQDPLLRANLAILYLDQGRMKEAKREIDTAIALDPSFDIALLARGRY 80

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+   +  +A+  L      A   +    ++L A   E  D+     +  +A    K   
Sbjct: 81  YLQTGDRDKALQDLLAA-STANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLDKNDP 139

Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEK 285
                  A         +    R A+  L +
Sbjct: 140 VISAFRTAVDI--DDYDADGAIRNAQEYLRR 168


>gi|154249690|ref|YP_001410515.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1]
 gi|154153626|gb|ABS60858.1| Tetratricopeptide TPR_2 repeat protein [Fervidobacterium nodosum
           Rt17-B1]
          Length = 359

 Score = 43.8 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 64/186 (34%), Gaps = 12/186 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVT 191
           E     A + L   +++        YS+  E+   IG+   A  Y  K + ISP   +  
Sbjct: 145 EGDIEGAIKYLNRSIELDPW-LIQSYSMIGEAYYNIGNYEKAVEYWEKEIAISPSNTFTY 203

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDAI 250
             +   Y    +  +AI  L + ++ ++        +  + R   N +K     S    I
Sbjct: 204 FMISDAYTKIGKLEKAIEILEKYREESENSIIALYELAELYRKKGNEEKAKEYESLIMEI 263

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPE--IANIYTHLLSE 305
           +  K   N I      AK  + +    K   ++E   K NP   H    +A  Y      
Sbjct: 264 DPQK-DPNGIE---IWAKVHLKKGNYDKVISVIENAIKANPEAKHLNLVLAVAYVKTNQI 319

Query: 306 NTVGKL 311
               ++
Sbjct: 320 EKARRV 325



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 88/268 (32%), Gaps = 38/268 (14%)

Query: 140 HEKLEMMLQIPATREFAVYSL----YFESCRIGDLNSAQRYATK------------ALDI 183
               E ++          Y L       +   G    A  YA K            A+ +
Sbjct: 68  ELVYEPIVWTEVKEFLEKYGLTPENMLHATADGLYELAIEYADKNQIEVAKDILKFAMRL 127

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             +     E      +   +   AI +LN+  +   +    ++  +I  +    + G+  
Sbjct: 128 DKNYAPAYEFFGSLLLEEGDIEGAIKYLNRSIE--LDPWLIQSYSMIGEA--YYNIGNYE 183

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------EIAN 297
            +     + + +  ++       + +     K  KA  ILEK ++           E+A 
Sbjct: 184 KAVEYWEKEIAISPSNTFTYFMISDAYTKIGKLEKAIEILEK-YREESENSIIALYELAE 242

Query: 298 IYTHLLSENTVGKLKRALRL-----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +Y    +E    K K    L      + +   +E   I +K+ L+ G+ D+  +    A+
Sbjct: 243 LYRKKGNE---EKAKEYESLIMEIDPQKDPNGIE---IWAKVHLKKGNYDKVISVIENAI 296

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILY 380
           K  P  +   L+  +    ++  +K   
Sbjct: 297 KANPEAKHLNLVLAVAYVKTNQIEKARR 324


>gi|329957249|ref|ZP_08297769.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
 gi|328522962|gb|EGF50065.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
          Length = 319

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 85/231 (36%), Gaps = 10/231 (4%)

Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A    + + A +   E +             L     +  + + A++   K   I P+  
Sbjct: 37  AQRMGRADYAIKCFTEALALQEDFETMGY--LAQVYIQSNEPDEARKLLEKMTQIEPEHT 94

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +     + ++++        +K  A E     A  L+ ++    + G M  ++  
Sbjct: 95  STFLTLANVCYMQEDYAA--MAEAAQKAIAIEEGSAMAHYLLGKADNGQNDGIMCIAHLT 152

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-HLLSENT 307
             +++ L D+   A +  A++L    + ++A   ++ +   +P  E A +    +     
Sbjct: 153 --KAIVLKDDFTEARLLRAEALTKMRQYKEAMEDIDAVLAQDPDDESAILLRGKIKEATG 210

Query: 308 VGKLKRALRL--EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 A  L   E+N  + ++ + + ++ +    + +A A    A+++ P
Sbjct: 211 AEAEAEADYLHITELNPFNEQAFLYLGQLYIVQKKLTEAIALFDEAIELNP 261


>gi|257140312|ref|ZP_05588574.1| TPR domain-containing protein [Burkholderia thailandensis E264]
          Length = 604

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 9/246 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180
            +L  ++AL       A++    + +       A  +  +   +    D  +A     + 
Sbjct: 78  QVLAAEVALQRNLPAPAYQTYLALARDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 136

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              SPD+    +      VL  + + A   L Q+   A   NR +AI+ +   L  A   
Sbjct: 137 --YSPDSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDNRGQAIIALQALL--ARGP 192

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           + +       + LK   N   A +  A+  ++ + K  A   L++  ++ P    A +  
Sbjct: 193 NRVGGLTVLQDLLKNDMNRPEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 252

Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +        +    +  + N +S +  + ++++ L    +D A  +   AM+     +
Sbjct: 253 SQMGPGERAAGIASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQF-DAMRRNDSSD 311

Query: 360 IFLLLA 365
              L+A
Sbjct: 312 PTPLMA 317



 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 78/242 (32%), Gaps = 43/242 (17%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q+ LA+ + + A ++ + M +  ++    + ++     +   L+ A  Y  + + 
Sbjct: 281 RLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVK 340

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++                             +KK   +  +    L    +    D+ + 
Sbjct: 341 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNNE 367

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEI 295
             +     +  +     + A +  A+ L  Q K  +A  +L  +   +PH        + 
Sbjct: 368 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQVSDPHDAAVIARTDA 427

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + ++     +    +L +A    E   +  +     +    ++G       +  L M+  
Sbjct: 428 SILFASRRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRAQ 484

Query: 356 PR 357
           P 
Sbjct: 485 PD 486


>gi|260829275|ref|XP_002609587.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae]
 gi|229294949|gb|EEN65597.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae]
          Length = 738

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 14/204 (6%)

Query: 196 QQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           +       +S AI   +   ++    +       ++  SL       +  +     +SL 
Sbjct: 520 RLQHDQGRYSEAIETYMEAIRRRPSHYAPQSLYNMLGESL--FKNSQLAEAEEWFKKSLA 577

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTH-LLSENTV 308
              + + A +  AK +   N+  +AE++ +K  +        H            SE   
Sbjct: 578 AKPDHVPAHLTYAKLMAKTNRAAEAELMYQKAMELDSNSATVHQHYGQYMAETGRSEEAA 637

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
             + +A    E+     E++   +    + G  + A      A ++ P      + L  I
Sbjct: 638 DMMVKA---VELGSPEFETIFNAANALRQAGRHEDAEKYYKQATQLKPEVASAHMNLGAI 694

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
              N    +    +   AL   PD
Sbjct: 695 LHLNGKYVEAETSYL-RALELKPD 717


>gi|158333792|ref|YP_001514964.1| hypothetical protein AM1_0600 [Acaryochloris marina MBIC11017]
 gi|158304033|gb|ABW25650.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
          Length = 367

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 78/223 (34%), Gaps = 11/223 (4%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            Q + A    + ++++      A   L     R    + A +   K ++I+P       +
Sbjct: 125 GQNDQAAAAYQKVIELEPKNVRAYEGLAVIYSRQQKYDEAFQNFQKVIEINPKNGGAYNS 184

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   ++   +   A+T L +    + +    +  L +A + +    G          +++
Sbjct: 185 IGLIHLKRNQVEPAVTNLEKAATLSPKNGEIQMNLALAYAAQ----GKTEEGLVALDKAV 240

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIYTHLLSENTV 308
           KL   +    +   + L SQ    +A    ++  +        H  + ++   +   + +
Sbjct: 241 KLDPRNPKVHLRTGQLLQSQGNNERAITAYKQALRHDKNLGAAHEGLGDVL--MQKGDAL 298

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           G +    +  ++ K +  +   ++K  +      +A  +   A
Sbjct: 299 GAVVAFRQATKLEKRNPSAFYKLAKALIARNRHREAIPELHKA 341



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 1/125 (0%)

Query: 93  MSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           +++A A        + +             V+L   Q+  ++     A    +  L+   
Sbjct: 219 LALAYAAQGKTEEGLVALDKAVKLDPRNPKVHLRTGQLLQSQGNNERAITAYKQALRHDK 278

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A   L     + GD   A     +A  +    P     + +  +       AI  L
Sbjct: 279 NLGAAHEGLGDVLMQKGDALGAVVAFRQATKLEKRNPSAFYKLAKALIARNRHREAIPEL 338

Query: 212 NQKKK 216
           ++ ++
Sbjct: 339 HKARQ 343


>gi|120602594|ref|YP_966994.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
 gi|120562823|gb|ABM28567.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
          Length = 562

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 14/198 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GDL +A R A +  +  P+     E   Q  V       A+  +++      +     
Sbjct: 359 EKGDLEAALRTAREGRETFPEQRDFREMEAQLLVNMGRSEEALRVIDKAADRWPD----D 414

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILE 284
           + LL  R+L   D+G   A++    E +K   +   A      +L  Q     +A  +LE
Sbjct: 415 SGLLFMRALILDDRGAKDAAFAAMEEVIKASPDHAQALNYVGYTLAEQERDLTRAVSLLE 474

Query: 285 KIWKVNP-HP----EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +   ++P +P     +A  Y            + RA+ L   +    E       IA  M
Sbjct: 475 RANTLSPDNPFILDSLAWAYFKAGRMPEAWKAISRAIELNAPDPIIWEHY---GDIATAM 531

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G  + A      A+ + P
Sbjct: 532 GQKNTARRAYRKALSMNP 549



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 30/241 (12%)

Query: 155 FAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             +  L  ES       D   A   A  A    P      + + Q  V  + +  A    
Sbjct: 113 LGLTLLLAESYLDLDRNDEAIALLRAYNA--KHPKDDEARQELAQLLVKTRRYEEA---- 166

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
             K   +       ++L    +        +  +     +++K   + + A    A    
Sbjct: 167 -DKLILSIGETSRTSLLRYYHARALMGLNRLTEATAQLRKAVKASPDFLEAWAELAYVYE 225

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIA------NIYTHLLSENTV--GKLKRALRLEEINKE 323
            +    +AE I E+         +A      +++  L++ N      +K    L     E
Sbjct: 226 LRKNYVEAEKIYEQ--------ILALDEGNQDVWLRLVAINIKLNNPVKAYE-LARQGPE 276

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYW 381
           +   ++  + + L+    +QA    +LA+K +P   +E++  LA +      +TD  L W
Sbjct: 277 TFGFMLTAATLFLDDRFFEQA-EGLLLAVKDSPGAPEEVYFFLAVLAYEGQRDTDATLSW 335

Query: 382 T 382
            
Sbjct: 336 L 336


>gi|157135487|ref|XP_001663464.1| smile protein [Aedes aegypti]
 gi|108870211|gb|EAT34436.1| smile protein [Aedes aegypti]
          Length = 683

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 1/102 (0%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            Y++   +   GD  +A ++  +AL++ P+       +   Y  AK++ RA+  L +  +
Sbjct: 430 HYNIAKLAADQGDKATAFQFYQQALELYPEYEVAHMNLGNLYSDAKDYRRALKHLQKAIE 489

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             ++++     L I  +    +  D + SY  A++  K   N
Sbjct: 490 YHEDFHTAWMNLGIVHAA-LKNHKDALVSYQRAMKGKKHYPN 530


>gi|56755980|gb|AAW26168.1| SJCHGC02873 protein [Schistosoma japonicum]
          Length = 708

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 5/142 (3%)

Query: 94  SIAAHNIPLARKMHSYVSQQ-HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA 151
           ++ + +I           +    + N    Y L  QI      +  + +    ++   P 
Sbjct: 530 ALTSGDISKVDSRIEEFRRLVKKYPNCLETYSLFAQILSERGDFQESDKIFADLINLSPD 589

Query: 152 TREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           +    A   L     +  D ++A  Y  + +   P    + E + Q  V   ++  A+  
Sbjct: 590 SGLAYAHRGLLQLKWKQ-DRDAALSYFIEGIKKDPKCELIHELLGQLSVEKGQFIDALKH 648

Query: 211 LNQKKKNAKEWNRNRAILLIAR 232
            N   K AK  N + A L+  R
Sbjct: 649 FNLAIKQAKTQN-DLAHLIALR 669



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 88/265 (33%), Gaps = 17/265 (6%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIG--DLNSAQRY--A 177
           LL         +   A E+ + +    +     V   +L   +C     D + A      
Sbjct: 412 LLHATYQALAGRSEEAKERFQNIGAPDSGASLVVRVNALIKSACLSMSVDQDVASCLYDF 471

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIARSL 234
            +A     + P +     Q  +LA +   A+  LN   K   E+      R   L   +L
Sbjct: 472 QRAQSAWSECPDIYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQRLYTLYRCAL 531

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            + D   + +   +    +K   N +      A+ L  +   ++++ I      +N  P+
Sbjct: 532 TSGDISKVDSRIEEFRRLVKKYPNCLETYSLFAQILSERGDFQESDKIFAD--LINLSPD 589

Query: 295 IANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               Y H         ++    L   +   + + +      ++ ++++E G    A    
Sbjct: 590 SGLAYAHRGLLQLKWKQDRDAALSYFIEGIKKDPKCELIHELLGQLSVEKGQFIDALKHF 649

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSH 373
            LA+K A  +     L  + +  + 
Sbjct: 650 NLAIKQAKTQNDLAHLIALREGVNA 674


>gi|71281690|ref|YP_269096.1| TPR domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71147430|gb|AAZ27903.1| TPR domain protein [Colwellia psychrerythraea 34H]
          Length = 743

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 16/192 (8%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYS 159
            A +M              L  L +VQ          A        ++           +
Sbjct: 535 KAIRMEVA----RVLAAVPLEQLPKVQAQQLAN----AQNNYIISQLVNNDTANS--HQN 584

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     + G ++ A++   KAL I+         +   Y    + S+A   L    K   
Sbjct: 585 LALFYAKQGQISKAEQLYKKALSINTKFVPAMVNLADLYRQTGKDSQATVLLFNAVKVMP 644

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E     A+   A  L+   + +MI +      +  L  N        A +L + N+ +KA
Sbjct: 645 E----NAMAQFALGLQQVRQKNMIVAIKHLQIAAGLSPNLPYYHYVYAVALDTNNETKKA 700

Query: 280 EVILEKIWKVNP 291
            V+LE   +VNP
Sbjct: 701 VVVLENSLRVNP 712


>gi|304321043|ref|YP_003854686.1| hypothetical protein PB2503_07434 [Parvularcula bermudensis
           HTCC2503]
 gi|303299945|gb|ADM09544.1| hypothetical protein PB2503_07434 [Parvularcula bermudensis
           HTCC2503]
          Length = 392

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 85/292 (29%), Gaps = 55/292 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-------QYNIAHEKLEMMLQIPAT 152
               + +  +    + F     +  L+    L             +A +K    L I + 
Sbjct: 57  GRALQGLRKFKDALNCFLQAAQIDPLQPSAHLMAGICAFVVPDLPLAEKKFRTTLDIDSK 116

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A   L     R GD N A+ +  KAL I+P+         +  +   +   AI  L 
Sbjct: 117 SSAAHVGLSQVLVRNGDNNQAREHLDKALRINPEMSMAVILKARLDLKDGDADSAIIQLQ 176

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC---AAKS 269
            + +     N   A   +  +    ++     +        ++  ++   +I      + 
Sbjct: 177 DQVRRTP--NNRTAEFALIGAYMQDERWQEAEALLS-----RMVSDNPNDAIMHGLLGRV 229

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESL 328
            + +   + A    E+ ++  P           +S N +  L R    L+ +  +     
Sbjct: 230 RVKRGDFKGA----EEAYRQAP-----------VSHNRIQNLARNVQMLDALVPQ----- 269

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
                     G  ++A        K+ P       LA I      +  K   
Sbjct: 270 ----------GKYEEARKILSQVPKMGP-------LAAIVNTRYGDVYKAEG 304


>gi|254514412|ref|ZP_05126473.1| putative sulfotransferase [gamma proteobacterium NOR5-3]
 gi|219676655|gb|EED33020.1| putative sulfotransferase [gamma proteobacterium NOR5-3]
          Length = 530

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 23/206 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ  A +A  +        E      +   + + A     Q  +   +     A      
Sbjct: 2   AQHSADQANWLRSTLREGFE-----RLQRGDQAGAANCCRQVLERKPDL----AEGHFLV 52

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +   +  D   +        KL      A    A+  + + +  +AE  L K      H
Sbjct: 53  GMIALNADDSRTAIQGFGSVTKLQPKHSGAWAQLARLFMRRGQVNRAEDALAKA---VAH 109

Query: 293 PE--------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +        IA +YT L +     + +   +    +  ++  L+  +   + MG    A
Sbjct: 110 ADDNPMVQDTIATVYTLLGNAEAASQWQ--EKALARHPNNIGFLINRANNQMFMGDFTGA 167

Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQ 369
            ++   A+ + PR      L++ +E+
Sbjct: 168 RSRLESALTLNPRHANTHWLMSSLEK 193


>gi|209527035|ref|ZP_03275551.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209492546|gb|EDZ92885.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 1038

 Score = 43.8 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 20/142 (14%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-- 214
           V     +  R G    A     KA+   P   W    + +    +++W  A+    +   
Sbjct: 6   VRG--NQLLRSGKPEEAVDAFRKAIAHHPHFHWSHYKLGEALEHSEDWLNAVAAYQKAVE 63

Query: 215 -KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKS 269
            K N+  ++   A+ L+                  A++ LK   +   +         K 
Sbjct: 64  LKSNSIRYHYQLAVALV-----------ETEQIDAALDVLKAGLDLEPSGSDYYHLLGKC 112

Query: 270 LISQNKKRKAEVILEKIWKVNP 291
           L  + + ++A    +K  ++NP
Sbjct: 113 LAEKEQWQEAIAHYQKALEINP 134


>gi|325298672|ref|YP_004258589.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
 gi|324318225|gb|ADY36116.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
          Length = 488

 Score = 43.8 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 7/163 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           V LL  ++AL +     A    E    + P           +   R+   N A  +  KA
Sbjct: 103 VRLLYTELALIQGDAEKAKCLFEQCYEENPYIETLFDIGQLYLDYRMK--NEAYPWILKA 160

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               P+ P   E +     +++ W  A   L  +  +   +N +  + L   S  +  +G
Sbjct: 161 FKQEPENPEAIELMASFQYMSENWPEAEK-LYNRLLDEFPYNTDTWLNL---SKCHYQQG 216

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            +  +      +L + D S+ A    A   +   +  KA   L
Sbjct: 217 QIEQAIEALDFALAIDDTSLFARELKAHCYLDLGESEKALQCL 259


>gi|294507597|ref|YP_003571655.1| hypothetical protein SRM_01782 [Salinibacter ruber M8]
 gi|294343925|emb|CBH24703.1| putative TPR-repeat protein [Salinibacter ruber M8]
          Length = 1064

 Score = 43.8 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 18/214 (8%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  +A     +A      AP       +  +   + +     L++ ++      R R   
Sbjct: 110 DAATAFATFRQAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTAR 169

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILE 284
           L   +    D+G+   +    ++++    +       A     ++  +Q     A    +
Sbjct: 170 L-GLAQYYLDQGNPDRAKSQ-LQTIATAPSRPDEGARALYLLGRTEQNQGNPNAALPYFK 227

Query: 285 KIWKVNPHPEI--ANIYTHLLSENTVGKLKR----ALRLEEINKESVESLVI---VSKIA 335
           +++   P+ E+  A +Y   +++  + +  R      RL E   +S  S  +   + ++ 
Sbjct: 228 QVYSRYPNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVY 287

Query: 336 LEMGSIDQAHAKAM---LAMKIAPRKEIFLLLAQ 366
             +G  + A  +       +  + R     LL +
Sbjct: 288 YRVGQYENAATELQRRLPDLTGSTRARTLFLLGE 321


>gi|307263382|ref|ZP_07544998.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306871260|gb|EFN02988.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 391

 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 84  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 204 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 259

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 318

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341


>gi|190150049|ref|YP_001968574.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189915180|gb|ACE61432.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 398

 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 91  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 266

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 325

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348


>gi|165976153|ref|YP_001651746.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165876254|gb|ABY69302.1| predicted N-acetylglucosaminyl transferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 398

 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 91  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 266

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 325

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348


>gi|78358046|ref|YP_389495.1| response regulator receiver domain-containing protein
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78220451|gb|ABB39800.1| response regulator receiver domain protein (CheY-like)
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 451

 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 7/132 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           LI  +     +G+   +   A + L++  NS    +    +     K  KA    E+  +
Sbjct: 158 LIDAAKALVAQGNFETALKAARKILEVKPNSAAGYLVMGDAWQGLGKLDKARESFEQASE 217

Query: 289 VN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                  P  ++A    H L+ +   +L+   RL++++  +VE  V + +I +E+G+ ++
Sbjct: 218 HANLYMEPLKKLAE--LHKLTGDMNERLRYLERLDQLSPLNVERKVDMGEIHVELGNEER 275

Query: 344 AHAKAMLAMKIA 355
           A      A++ A
Sbjct: 276 AEELFETAVQQA 287



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 5/132 (3%)

Query: 133 ERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
            R  + A +     L         T       L     R G    A     KAL I+PD 
Sbjct: 308 SRDPHKAEKYYRQALDAKGSHLDHTDIATFNRLGIALRRQGKWQQAIEEYEKALHITPDD 367

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P +   +   Y   +++ +A + + + ++    +      L     +  +       +  
Sbjct: 368 PNLMYNMSMAYAEGRQFDKACSIVMRIRQITPSFGSMDKTLSYNMGIIFSRGRQPADARV 427

Query: 248 DAIESLKLCDNS 259
               +L+L  + 
Sbjct: 428 LFENALRLDPSF 439


>gi|307249950|ref|ZP_07531922.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858010|gb|EFM90094.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 391

 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 84  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 204 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 259

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 318

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341


>gi|170094074|ref|XP_001878258.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646712|gb|EDR10957.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 793

 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 13/251 (5%)

Query: 135 QYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            Y  A    + +  +   R     VYS      +     S    A + L+I+P +P    
Sbjct: 516 DYASAERAFKAVRALEPHRLWDMEVYSTLLWHLQRNVELS--FLAQELLNINPQSPQAWI 573

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+   + L KE  +A+T   +  +         A        E+ D+ D+  + +    +
Sbjct: 574 AIGNLFSLQKERLQALTCFRRAGQLDPT----CAYAFTLSGHESIDE-DLEKAINFFQSA 628

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-- 310
           L+       A        +  +K R AE    K  +++P+  +      +  +    +  
Sbjct: 629 LRADPRHYNAWYGLGTCYLRMSKIRLAEYHYRKAVEIHPNNAVLLGCVGMAVDRRGDRDA 688

Query: 311 -LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIE 368
            L        +  ++       +KI + M   ++A    +      P +  +   LA++ 
Sbjct: 689 ALALFDEAVRLAPDNALVRYRRAKILVSMRKYERAVEDLVSLRNSTPEESNVVFQLAKVY 748

Query: 369 QANSHNTDKIL 379
           +      +   
Sbjct: 749 RLLGDEVNSAK 759



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 18/168 (10%)

Query: 167 IGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             DL  A  +   AL   P     W         +        I       + A E + N
Sbjct: 615 DEDLEKAINFFQSALRADPRHYNAWYGLGTCYLRMSK------IRLAEYHYRKAVEIHPN 668

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+LL    +    +GD  A+     E+++L  ++ +     AK L+S  K  +A   L 
Sbjct: 669 NAVLLGCVGMAVDRRGDRDAALALFDEAVRLAPDNALVRYRRAKILVSMRKYERAVEDLV 728

Query: 285 KIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
            +    P       ++A +Y  L  E     +  A  L      S +S
Sbjct: 729 SLRNSTPEESNVVFQLAKVYRLLGDE-----VNSAKTLALARDISPKS 771


>gi|158523125|ref|YP_001530995.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 284

 Score = 43.8 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 4/125 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              + A       L       +A  +L       G  + A     KAL I P        
Sbjct: 144 GDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKALSIFPRMAEALSG 203

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  A +++ A+  L++  +    ++         R+      G+   +  +A++++
Sbjct: 204 RGSVRAQAGDYTGALADLDKAIEFYPSYH----TAYYNRARVYQLTGNREKALANAVKAV 259

Query: 254 KLCDN 258
            L  N
Sbjct: 260 GLFPN 264



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 34/259 (13%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            ++   QY+ A E    +L +      A  +       +GD   A     +AL I+PD P
Sbjct: 2   ASVQAGQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFP 61

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                  + +    +  +A+  L++  + A ++    A     R +     GD I +  D
Sbjct: 62  ESYNGRGKAFCDMGQMDKALADLDRAVELAPDF----ADAYNNRGVALRKTGDFIGALAD 117

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
              ++++  +       AA+   ++             W              L   +  
Sbjct: 118 HSRAIQMRPDR------AAEFYNARG----------VTW--------------LEKGDPD 147

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
             +         N     +   ++   +E G  D+A A    A+ I PR    L      
Sbjct: 148 KAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKALSIFPRMAEALSGRGSV 207

Query: 369 QANSHNTDKILYWTQSALH 387
           +A + +    L     A+ 
Sbjct: 208 RAQAGDYTGALADLDKAIE 226


>gi|299065268|emb|CBJ36436.1| conserved protein of unknown function, TPR repeat domain [Ralstonia
           solanacearum CMR15]
          Length = 433

 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 83/228 (36%), Gaps = 17/228 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
                + A+  A KAL I PD      ++    +   +W      L Q   +A E N   
Sbjct: 177 ARETFHKAKMAARKALQIEPDLGEAYASLAHVRLHDWDWVD----LEQDFLHAIELNPGH 232

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+     +      G    +     +S ++   +   +   A  L    +  +A   L K
Sbjct: 233 AVAYYWYAEYLMMAGRAEDAIARVRQSQQMDPLNSSLNSSVAMILYLARQYDQAREELRK 292

Query: 286 IWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +++P     H  +  +Y      ++ + ++++A+ L      S E+L  +++      
Sbjct: 293 ALEIDPNHFLLHSRLGLVYQQQKLFDDAIEEMQKAVTLSGR---STEALTGLAQT-YAAA 348

Query: 340 SIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYWTQSA 385
            +  A  + + A++    +       +A++   +  + ++   W + A
Sbjct: 349 DMRAAMQQIVDALQTESEQHYVHPYNMAKV-FGSLGDKEQTFGWLEKA 395


>gi|326318108|ref|YP_004235780.1| type 12 methyltransferase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374944|gb|ADX47213.1| Methyltransferase type 12 [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 436

 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 23/194 (11%)

Query: 91  GLMSIAAHNIPLA---RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           GLM+  A NIP A    +    ++         L  LL  +    + Q   A E  E + 
Sbjct: 52  GLMAEKAGNIPKAFDGLRRAVTLAPDWGPGQLELA-LLHAR----QNQLREAVELAEKLA 106

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                    +  +   + R GDL+ A R+  + L++ P    +   + +      + + A
Sbjct: 107 AREPRNLVVLAGVVDIAHRAGDLDMAVRHLRRGLEMVPGDVQLRRLLARDLSDQGQHAEA 166

Query: 208 ITF----LNQKKKNAKEWNRNRAILLIA----------RSLENADKGDMIASYHDAIESL 253
           +      +++  ++ +         + A           +L     GD + +Y+ AI + 
Sbjct: 167 LQVWGALIDENPQDTEARLGRVKTCIAAGTPAQAVADTTALMELAPGDSVVAYYTAI-AH 225

Query: 254 KLCDNSIMASICAA 267
            +        +  A
Sbjct: 226 GVTPQHQPPELHRA 239



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 41/210 (19%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +   +  +A   LN+ ++      R   +      L     G++  ++     ++ L  
Sbjct: 21  QIARGDLQQAALTLNKAQRTQPNDPRVFMLA----GLMAEKAGNIPKAFDGLRRAVTLAP 76

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------------HP--EIANIYTHL 302
           +     +  A     QN+ R+A  + EK+    P             H   ++     HL
Sbjct: 77  DWGPGQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVVDIAHRAGDLDMAVRHL 136

Query: 303 LSE----------------NTVGKLKRALRLEEI------NKESVESLVIVSKIALEMGS 340
                              +   + + A  L+        N +  E+ +   K  +  G+
Sbjct: 137 RRGLEMVPGDVQLRRLLARDLSDQGQHAEALQVWGALIDENPQDTEARLGRVKTCIAAGT 196

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
             QA A     M++AP   +      I   
Sbjct: 197 PAQAVADTTALMELAPGDSVVAYYTAIAHG 226


>gi|296804290|ref|XP_002842997.1| anaphase-promoting complex protein [Arthroderma otae CBS 113480]
 gi|238845599|gb|EEQ35261.1| anaphase-promoting complex protein [Arthroderma otae CBS 113480]
          Length = 766

 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 53/150 (35%), Gaps = 23/150 (15%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPA------------TREFAVYSLYFESCRIGDLNSA 173
             Q+     +++ A    + M  +PA            T    +  L  +     D  +A
Sbjct: 481 SAQVLSWSGRHDDAV---KQMNSLPADCLQLLKHQQIWTFFMGLLKLRRQ-LHRDDQRAA 536

Query: 174 QRYATKALDISPDAPWVTEAV----VQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAI 227
           Q    +    +P  P  +  +    +   +   ++  A+  ++Q  +  + + ++    +
Sbjct: 537 QHLLAQLEGAAPLDPEASTTLNLMKIDLLMREGDYETALASVDQLAQSIHQENFDIATQV 596

Query: 228 -LLIARSLENADKGDMIASYHDAIESLKLC 256
            LL+A++      G     +  A+ + K+ 
Sbjct: 597 DLLVAKARIFDKTGQPERGFSLAMRAAKIA 626


>gi|228470675|ref|ZP_04055527.1| putative TPR domain protein [Porphyromonas uenonis 60-3]
 gi|228307607|gb|EEK16600.1| putative TPR domain protein [Porphyromonas uenonis 60-3]
          Length = 384

 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 60/196 (30%), Gaps = 35/196 (17%)

Query: 168 GDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            D  +   +  KAL   P     W   A +  Y +  +  +A+    +     +     R
Sbjct: 59  EDQTAFLEHVQKALQSEPNNGVAWAYVATI--YRMQGKTEQALEAATKAITFLQAKPARR 116

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A++   RS    D  D + +  D   ++K   +            + +     A      
Sbjct: 117 AMVYSLRSDIYTDLEDGVKALMDLHSAIKDAPD-TP------NLYLKRGNLYAAMG---- 165

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                   ++A +                 ++  ++ ++    + ++ IA++    + A 
Sbjct: 166 ------QYDLAEV--------------DMRKIASLDPKNPIGYIGLAVIAMQQERYEDAI 205

Query: 346 AKAMLAMKIAPRKEIF 361
                 +K+ P +   
Sbjct: 206 QNLNETIKLEPNEGFL 221


>gi|187251549|ref|YP_001876031.1| type II secretion system [rpteom [Elusimicrobium minutum Pei191]
 gi|186971709|gb|ACC98694.1| Putatively involved in type II secretion system [Elusimicrobium
           minutum Pei191]
          Length = 331

 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 83/230 (36%), Gaps = 20/230 (8%)

Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             YA K    A+ ++P+   +   +   Y+   ++  AI +LN+  +    +       L
Sbjct: 85  LDYAEKDYLKAVKLNPNDAKILNNLGAFYIDRGQYYNAIIYLNEALRARPNYYN----AL 140

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           + R +   + G+ I +Y+D  +++ +  +  +A                A   L++   +
Sbjct: 141 VNRGIAFYNAGEGIKAYNDFHKAININKDGWLAYYNRGLFYYDIGDYLNAA--LDQTRVI 198

Query: 290 NPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           N  P     Y        L+      L       E+   +  +   ++++  +   +  A
Sbjct: 199 NLKPSYGKAYLERGRALKLNNMYADALDDFKMAVELAPNNAVARYYLAEMFFKNHDLGGA 258

Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
            ++ +++ ++ PR    + L+  I     + +    Y     L    DP 
Sbjct: 259 LSELLISKQLDPRFVPTYELMGDILALEDNVSAAANYIIAKKL----DPA 304


>gi|110833382|ref|YP_692241.1| TPR domain-containing protein [Alcanivorax borkumensis SK2]
 gi|110646493|emb|CAL15969.1| TPR domain protein [Alcanivorax borkumensis SK2]
          Length = 532

 Score = 43.8 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 3/134 (2%)

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A L  AR+L    +     +      +LKL      A +  A+ L     ++KA   L+
Sbjct: 145 QAPLWYARALWLEHEEQPQPALEATERTLKLMPRHEDALLLKAQLLYETGDQKKALRHLK 204

Query: 285 KIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           K+ +  P    P IA +   L S       K+   + E N + ++    ++ +ALE G+ 
Sbjct: 205 KLVRKYPQAQRPRIAYVRMLLTSGELEDAEKQLAIMAEQNPQDLDLRFSLALLALEAGAS 264

Query: 342 DQAHAKAMLAMKIA 355
           + A       +   
Sbjct: 265 NAAQTHLKALLTYN 278


>gi|89900355|ref|YP_522826.1| hypothetical protein Rfer_1563 [Rhodoferax ferrireducens T118]
 gi|89345092|gb|ABD69295.1| putative transmembrane protein [Rhodoferax ferrireducens T118]
          Length = 385

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 87/285 (30%), Gaps = 44/285 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ-RYATKAL---DISPDAPW 189
            +Y  A    E +L                +  +  L +     + +AL   + +P    
Sbjct: 85  GEYERAVRVHEHLLSRGDLNLLD-RQRAQHALALDYLKAGLIDRSEEALLKLEGTPFEAQ 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y  +++W RA     + +  N   +    A  L  ++ E+    +   +   
Sbjct: 144 ARLALLANYERSRDWLRAAQIAQKLEHANQGSFQGRLAHYLCEQAAESLTAQEPEQANSL 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSEN 306
             ++L    ++    I  A+ L  Q +  +A ++L++  +  P   P IA   T      
Sbjct: 204 LQQALSTAPDAARPPIDLAQLLARQGQPEEAYLLLKRSLQSAPAATPLIAAPLTDY---- 259

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
                                       A+  G   +A      +   +P  ++   +  
Sbjct: 260 ----------------------------AIACGRAPEALTLLKTSYAHSPSLDVLDAIVL 291

Query: 367 IEQANSHNTDKILYW----TQSALHAMPDPLWISDDGYLSSVWLP 407
           +E  +   T     W     +     +    W++ +      + P
Sbjct: 292 LEAGHGGPTPTARDWYVQHLEREPSLVAAAKWLAGEKLEHEQFHP 336


>gi|327259895|ref|XP_003214771.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Anolis carolinensis]
          Length = 1244

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 102/305 (33%), Gaps = 41/305 (13%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 523 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 582

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +  + +L+           L   +   G+   A  +  +AL I+ D P     +   ++ 
Sbjct: 583 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 642

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHDA 249
            +EW        +  K     N   ++L +            R  E  +K     +    
Sbjct: 643 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIY 701

Query: 250 IESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIY 299
            + L+    N   A    ++ A K    + +      R+A   +  +W       +A+IY
Sbjct: 702 KQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIY 756

Query: 300 THLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                  +  ++      +  +   ++ E L+ +++   + G + +     + A  +AP 
Sbjct: 757 VEQKQYISAVQMYENCLRKFYKH--QNTEVLLYLARALFKCGKLQECKQTLLKARHVAPS 814

Query: 358 KEIFL 362
             + +
Sbjct: 815 DTVLM 819


>gi|325184412|emb|CCA18904.1| mitochondrial import receptor subunit TOM70 putative [Albugo
           laibachii Nc14]
          Length = 601

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 83/261 (31%), Gaps = 33/261 (12%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +  +  A    E  L+      F+   L        DL  A  +  KA  I PD P   
Sbjct: 332 LKGDFETAKACFEAALKEKPDSLFSFIRLGGLCFDQKDLPGALEWFQKAFAIKPDCPTAY 391

Query: 192 ---------EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                    +  ++Q   A+    AI  L      A ++       +    L        
Sbjct: 392 FHRGQLRSIDVSLEQSATAEGLREAIEDLTHCIGLASDF------AMAYMQLGVLHT--R 443

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLIS-----QNKKRKAEVI------LEKIWKVNP 291
           + ++      LK+    I  +  A   L             +  +       EK  +V+P
Sbjct: 444 VGAFDLGTTYLKVAAELIPDAPEAYNYLGEIYMQMLGHPESSVTLEMVENMFEKAIEVDP 503

Query: 292 HPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
              +A     +I       N    L    +  E++  S  + V ++++ L M + D A  
Sbjct: 504 TYPMAYINKGSILAQKNPANAQDALGLFKKAIEMSPRSKLAYVNLAQVYLAMQAYDLAVE 563

Query: 347 KAMLAMKIAPRKEIFLLLAQI 367
           +   A+K+    + +  LA +
Sbjct: 564 QIDQAVKLVYTSQEYSELAAL 584


>gi|261194773|ref|XP_002623791.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis SLH14081]
 gi|239588329|gb|EEQ70972.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis SLH14081]
 gi|239613393|gb|EEQ90380.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis ER-3]
 gi|327351895|gb|EGE80752.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 679

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 24/239 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSAQR--YA------TKALDISPD 186
             A    +  + ++P ++  A++  Y    +  GD +  +    A       + +  +P 
Sbjct: 260 ERARAIYKYALDRLPRSKSMALHKAYTTFEKQFGDRDGVEDVILAKRRVQYEEQIKENPK 319

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADKG 240
              +    V+    + +  R      +              R    L I  +L E  +  
Sbjct: 320 NYDIWFDFVRLEETSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELETK 379

Query: 241 DMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           DM  +     E +KL            +  A+  I Q   + A   L       P  ++ 
Sbjct: 380 DMERARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKLF 439

Query: 297 NIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             Y  L     E    + K   +  E N  + ++ +  +++   +  ID+A A   L +
Sbjct: 440 KGYIDLERQLFEFVRCR-KLFEKQIEWNPANCQAWIKFAELERGLDDIDRARAIYELGI 497


>gi|254447897|ref|ZP_05061362.1| hypothetical protein GP5015_186 [gamma proteobacterium HTCC5015]
 gi|198262677|gb|EDY86957.1| hypothetical protein GP5015_186 [gamma proteobacterium HTCC5015]
          Length = 585

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 97/277 (35%), Gaps = 24/277 (8%)

Query: 127 VQIALAERQYNIAHEKLEMML---QIPATREFAVYSLYF-------------ESCRIGDL 170
              A   +   +A +  +  L   +   T+  A   L                + R GD 
Sbjct: 87  AAAAEVMQDEEVAQQAAKAALYAKEYEKTQAAAERWLAINPNSSAAYRYAAVAALRQGDA 146

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A  Y    + ++  A       +   V       + T +   ++  + +         
Sbjct: 147 EAATTYFDARIQLATSARAGLLETIALLVSE---DTSETSIAVARQLPELYPEEDK-AYF 202

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A++   A      A+     E L+   + + A +  A+ L S  +  +A  +L    +V+
Sbjct: 203 AKATVEARFEQSEAALDSINELLQRAPDDLSAVMLKAQILESLERGDEALTLLSDTLEVH 262

Query: 291 P-HPEIANIYTHLLSENTVGKLKRAL--RLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P H E+   Y  LL +       RA   ++ +    +V+  + +  ++LE+  +D+A   
Sbjct: 263 PDHNELRLTYARLLIQEHRYFDARAEYQKMFQEQPHNVDLAMRLGFLSLELMELDEADNY 322

Query: 348 AMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQ 383
               ++     +E    L ++ +     +  + ++ +
Sbjct: 323 FSHVLRSGRNSQEALYYLGRVAEQRGDYSAALRHYLR 359


>gi|169863459|ref|XP_001838351.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130]
 gi|116500644|gb|EAU83539.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130]
          Length = 606

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 8/203 (3%)

Query: 89  YTGLMSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
              L+ IA+      N   A +      + +   N+  +Y    Q+      ++ A E  
Sbjct: 360 TQSLVKIASVHMEQGNPVKAFECFEEAIKHN--PNDPDIYYHRGQVLFIMSDFDKAAEDY 417

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
               ++     F+   L     + G++ ++     + +   P          +  +  + 
Sbjct: 418 TKSTELDDQFVFSHIQLAVAQYKAGNIANSMAQFRRTMKAFPQRSEPQNYYGELLLDQQR 477

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMA 262
           +  A+   ++  +  K   R   + L+ + L     K D+ A+     E+L +  +   A
Sbjct: 478 YQDAVEKFDRAIEIEKAKPRPNVLPLVNKGLALYQWKQDIAAAEECCNEALTIDPDCDAA 537

Query: 263 SICAAKSLISQNKKRKAEVILEK 285
               A+  + Q+K  KA  + +K
Sbjct: 538 VATLAQLSLQQSKIEKAMEMFKK 560


>gi|37521471|ref|NP_924848.1| hypothetical protein glr1902 [Gloeobacter violaceus PCC 7421]
 gi|35212468|dbj|BAC89843.1| glr1902 [Gloeobacter violaceus PCC 7421]
          Length = 326

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 8/171 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKA 180
            L        E++Y+ A E+   +L+   +      +    +   +  D   A     KA
Sbjct: 19  RLKLAGTLFREKRYDEALEEATAILEEEPSSLQALMLTGSVYLKTKRFDE--ALDAFQKA 76

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L + P +P     +   ++  K++ +A        K   +    +A + +  S    +  
Sbjct: 77  LRVDPLSPQACLGIGMAHLRKKDYKQATVAFESALK--LDPKSAKAYITLGMSALGQE-- 132

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               +     ++L+    + MA I  +++     K   A   LE   K+NP
Sbjct: 133 HYDLAIQYFNKALRFDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNP 183



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 2/180 (1%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           + ++              L      L ++ Y  A    E  L++      A  +L   + 
Sbjct: 70  LDAFQKALRVDPLSPQACLGIGMAHLRKKDYKQATVAFESALKLDPKSAKAYITLGMSAL 129

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
                + A +Y  KAL   P A      + + Y    +   A++ L    K   +     
Sbjct: 130 GQEHYDLAIQYFNKALRFDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNPKSGMAN 189

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L     L+N D     A+    +E+           +  A   +  ++  +A  IL  
Sbjct: 190 MSLASFY-LQNKDYTSAEAALQRVLEARGDKPA-PTIMLSLADLYVQTDRTEEAGDILRA 247



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 61/194 (31%), Gaps = 6/194 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G+  +   +   A    ++ S           Y+     AL +  Y++A +     L
Sbjct: 88  LGIGMAHLRKKDYKQA--TVAFESALKLDPKSAKAYITLGMSALGQEHYDLAIQYFNKAL 145

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +     E A   +     ++G    A      A+ ++P +     ++   Y+  K+++ A
Sbjct: 146 RFDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNPKSGMANMSLASFYLQNKDYTSA 205

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-ICA 266
              L +  +   +     A  ++    +   + D      D + +L              
Sbjct: 206 EAALQRVLEARGD---KPAPTIMLSLADLYVQTDRTEEAGDILRALPSAPKLQARKHKLF 262

Query: 267 AKSLISQNKKRKAE 280
                 Q   ++A 
Sbjct: 263 GDLYTKQGLLKEAA 276


>gi|116619165|ref|YP_821321.1| tetratricopeptide domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222327|gb|ABJ81036.1| Tetratricopeptide domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 632

 Score = 43.8 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 65/189 (34%), Gaps = 14/189 (7%)

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
              A  A   +PD      A +     A+++  AI+            N  + +      
Sbjct: 7   LAVAAVACAQTPDPAERGYAAL----RARDYDAAISAF---LGAPDRANVRKDLAYTY-- 57

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                 G+   +     E+++L    + A++  A       ++ +A  I E++ K     
Sbjct: 58  ---LKIGESELARDQFHEAMRLVPGDVTAALEYAFLCYETRQQAEARRIFERLRKSGN-- 112

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            IA    H + +     + R  +  E+  ++      ++ +A +   +  A  +   A +
Sbjct: 113 AIAEQAFHNIDDPLAEGIARWRKAIELGADNFSVHFELAVLAEQRDDLVLAAEQYERAWR 172

Query: 354 IAPRKEIFL 362
           + P +   L
Sbjct: 173 LIPARRTVL 181


>gi|239906747|ref|YP_002953488.1| hypothetical protein DMR_21110 [Desulfovibrio magneticus RS-1]
 gi|239796613|dbj|BAH75602.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 570

 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 57/173 (32%), Gaps = 11/173 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L+ + L    + +  A     + +     +    S+  A     QN++ KA   LE+  
Sbjct: 58  FLVYQDLLRQGRKEDAAQTLAGLAAAHPSPDL---SVELANLYWGQNEREKATETLEQAR 114

Query: 288 KVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              P        +AN Y      +    +K          +   ++  ++ + ++ G   
Sbjct: 115 TAFPGSRQVNFYLANAYQMRRLNDQA--IKVLESFLASQPKDYAAVQELASLEIDAGRNK 172

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLW 394
           +A        +      +  L+A+    +    D + ++  + A  A   P W
Sbjct: 173 EAGELLGRIPEGERDATVLYLMAKAAAGSGRAKDAMRHYRAAVAADAGLMPAW 225


>gi|225681558|gb|EEH19842.1| DnaJ and TPR domain-containing protein [Paracoccidioides
           brasiliensis Pb03]
          Length = 675

 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVL- 200
           Q P      +          G+   A  +   AL + PD+          + +++     
Sbjct: 429 QDPDALF--LRG--RLFYAQGENEQAINHFKLALSLDPDSSQAIKYLRMVQKLLRMKDEG 484

Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                ++++ +AI   ++  +   +     + LL  R+    +      S  D  ++L+L
Sbjct: 485 NAAYKSRKYQQAIDIYSKALEVDPKNKNINSKLLQNRAQSYLNLNKYEKSIEDCTKALEL 544

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             + + A    AK+        +A   L+KI + NP
Sbjct: 545 DPSYVKAQRVRAKAYGGAGNWEEAIQDLKKISEANP 580


>gi|329923007|ref|ZP_08278523.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
 gi|328941780|gb|EGG38065.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
          Length = 1112

 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 84/314 (26%), Gaps = 44/314 (14%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIA-------- 139
           +++ A +                  +          L   +      Q+           
Sbjct: 425 VAVFAADGKELVAYQPKPRTLERTPDPATAIGKPEELKNTEALFLAGQHLEQYRHATYEP 484

Query: 140 HEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALD------ISPDAPWVT 191
                  L+      R    Y L     R G    ++ Y  KA++        P      
Sbjct: 485 EAYYVEGLRRDAGDARLNNAYGLLL--LRRGCFTQSEVYFRKAIETLTRHNARPYDSEP- 541

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                    A +W   +         +      +    +A +    +K +   ++     
Sbjct: 542 ---FYHLGKALKWQGRLDEAYAYLYKSVWSGAWQGAGYLAIAQIACEKQEYEEAFELIER 598

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSEN 306
           SL     +  A    +  L    +   AE  LE+  K++P       E+A +Y      +
Sbjct: 599 SLAAQYRNYKARHLKSVVLRKLGRLADAESWLEETLKLDPMDAGAMNELAAVYQERNQGD 658

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-------- 358
               +     L ++ +++  + + +++   + G    A        + A           
Sbjct: 659 KSRHV--YESLAQLLRDNPHNYIAIAQDYADAGQYGDALNVLQRLERRAASAVYPMVYYY 716

Query: 359 --EIFLLLAQIEQA 370
                + + + E+A
Sbjct: 717 QGSALMKMNRAEEA 730


>gi|261408559|ref|YP_003244800.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Paenibacillus sp. Y412MC10]
 gi|261285022|gb|ACX66993.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Paenibacillus sp. Y412MC10]
          Length = 902

 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 83/289 (28%), Gaps = 83/289 (28%)

Query: 129 IALAERQYNIAHEKLEMMLQIPA---------TREFAVYSLYFESCRIGDLNSAQRYATK 179
               +     A +     + I                +  L  E      L +A     +
Sbjct: 521 AYQLQGDRAAAGQAYHEAVAISQKIGHFMIAMMATLGL-GLLQE--TDNQLYAAAVTYRR 577

Query: 180 ALDIS--PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            L+++  P  P   EA +    +  EW+     L+  +++          L   +     
Sbjct: 578 VLELAGDPPPPAACEAHLGLARICSEWND----LDAAERHG---------LKALQLAAQF 624

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           D+ D   +                  +  A+  +S+ + R+A  +L K            
Sbjct: 625 DQTDRAVACE----------------VFLARLKLSRGEVREAAAMLAKA----------- 657

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                       +L R  +         E+ V+V    L+ G+  +A   A        +
Sbjct: 658 -----------DRLGRQQQFMSQLPFIAEAQVLVL---LQQGNFGEASQLAQEHGLPLSQ 703

Query: 358 KEIFL--------------LLAQIEQANSHNTD-KILYWTQSALHAMPD 391
             + L              LLAQ+E     +   K++     ALHA  D
Sbjct: 704 ARVLLAKGQAGAALAIMEPLLAQMEAKEWADEQLKVMVVLALALHAQGD 752


>gi|153809534|ref|ZP_01962202.1| hypothetical protein BACCAC_03852 [Bacteroides caccae ATCC 43185]
 gi|149127842|gb|EDM19065.1| hypothetical protein BACCAC_03852 [Bacteroides caccae ATCC 43185]
          Length = 272

 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 59/169 (34%), Gaps = 9/169 (5%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  K  +  N   A+L     L     G+   +      +L     ++   +  
Sbjct: 40  AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEYDKALESYSFALNFAPLAVPILLDR 98

Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEIN 321
           A   +   +  +A      +L++  K N    +   Y ++   +    ++    RL E++
Sbjct: 99  AAIYMETGRTDRAYTDYCRVLDED-KQNKEALLMRAYIYILRRDYPAARID-YNRLLELD 156

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
            +S    + ++ +  +     ++       +   P    +++  A +E+
Sbjct: 157 PQSYSGRLGLATLEQKEEKFRESLDILNKMIVETPEDATLYVARADVER 205



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 8/197 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQI 149
           GL+         A + +S+            + L    I +   + + A+     ++ + 
Sbjct: 65  GLVQRRLGEYDKALESYSFALNFAPLAVP--ILLDRAAIYMETGRTDRAYTDYCRVLDED 122

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
              +E  +   Y    R  D  +A+    + L++ P +      +       +++  ++ 
Sbjct: 123 KQNKEALLMRAYIYILRR-DYPAARIDYNRLLELDPQSYSGRLGLATLEQKEEKFRESLD 181

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            LN+      E     A L +AR+    +      +  D  E+++L  +   A +     
Sbjct: 182 ILNKMIVETPE----DATLYVARADVEREMKHEDLALVDLEEAIRLNASLADAYLLRGNI 237

Query: 270 LISQNKKRKAEVILEKI 286
            + Q KK  A+   EK 
Sbjct: 238 YLMQKKKALAKADFEKA 254


>gi|91775277|ref|YP_545033.1| hypothetical protein Mfla_0924 [Methylobacillus flagellatus KT]
 gi|91775421|ref|YP_545177.1| hypothetical protein Mfla_1068 [Methylobacillus flagellatus KT]
 gi|91709264|gb|ABE49192.1| Tetratricopeptide region [Methylobacillus flagellatus KT]
 gi|91709408|gb|ABE49336.1| Tetratricopeptide region [Methylobacillus flagellatus KT]
          Length = 387

 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 91/271 (33%), Gaps = 16/271 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNA 218
           L  +  + G  + A+   T   D          A+++ Y+  +EW  AI   +  ++ + 
Sbjct: 114 LAQDYLKAGLFDRAEELFTSLHDSRYKQT-ALRALLEIYIREREWHHAIKSAVELERLSG 172

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             + +  A      +++   + D+ ++ H    +++     + A+I            ++
Sbjct: 173 ISFRKEVAQFHCEIAMKAILEHDVHSARHALDTAIEADKGCVRANIMLGDLEAGAGNHKQ 232

Query: 279 AEVILEKIWKVNP------HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIV 331
           A    +++    P       P++ N Y  L + +  +  LK  L+  ++       L +V
Sbjct: 233 AISFWKRVEFQRPEYLGLVAPKLLNSYKALGNLDEGITLLKGYLQTYKL----PSILNLV 288

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQ-IEQANSHNTDKILYWTQSALHA 388
            +  L       A   A   ++  P  +     L AQ + +  +     ++  T      
Sbjct: 289 YETTLSEEGAASAEKLAREELRRKPSLQALDQFLRAQSLLEGANQQDALLMQQTVRYAIG 348

Query: 389 MPDPLWISDDGYLSSVWLPLSPISKTLCYFE 419
                +    G+ +  +    P         
Sbjct: 349 NRSAHYCDQCGFRARNFHWQCPACNAWESLS 379


>gi|78050040|ref|YP_366215.1| polysaccharide deacetylase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038470|emb|CAJ26215.1| Polysaccharide deacetylase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 900

 Score = 43.8 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            AK  +R RA L   R L+   +     +     E+LKL  +  +A+         Q + 
Sbjct: 777 AAKSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQGRF 836

Query: 277 RKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLE 318
            ++   LE   K++P        + + Y     +    +   A  LE
Sbjct: 837 AESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKARKAYATYLE 882


>gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 260

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 15/204 (7%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               GD   A    T+AL +SP+           Y   + +  AI   NQ  +   +   
Sbjct: 49  KAEKGDYQGAIADLTQALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPD--- 105

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                   R + ++  GD   +  D  ++++L  +   A      +  +    + A    
Sbjct: 106 -DVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADY 164

Query: 284 EKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  K+N  P+ A  Y           +  G +    +  + N ++           L +
Sbjct: 165 NQAIKLN--PDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNL 222

Query: 339 GSIDQA----HAKAMLAMKIAPRK 358
           G   +A       A L  +    +
Sbjct: 223 GDQPKALEDFRQAATLFQQQGNTE 246


>gi|118358198|ref|XP_001012348.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89294114|gb|EAR92102.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1244

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 97/313 (30%), Gaps = 57/313 (18%)

Query: 98   HNIPLARKMH-SYVSQQHTFHNEYLVYLLEVQIA-------LAERQYNIAHEKLEMMLQI 149
             +   A++     V  +    N+    L   Q                 + E     L+I
Sbjct: 749  GDNKTAQQYDFKAVKMREALQNDEPSKL--AQSYCRIAVSYERLGDDKTSLEYKLKALKI 806

Query: 150  PATREFA--------VYSLYFESCRIGDLNSAQRYATKALDIS--------PDAPWVTEA 193
              T            + S+     R+G+   AQ Y  +AL +         PD      +
Sbjct: 807  RETLFQGNHHDLAFSLNSVAISYERLGNYKEAQDYFLRALKMREALYHGKHPDLAESYNS 866

Query: 194  VVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNR---AILLIARSLENADKGDMIASYHDA 249
            +   Y    ++S+A+   L         + +N    A  L   ++     G    +    
Sbjct: 867  IAAFYSRQGDYSKALDYELKSLYIREILYLKNHPDIAESLNNVAVAYEKLGFDEVAQEYD 926

Query: 250  IESLKLC--------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEI 295
            ++++K+              +          Q   +KA    +K  K+        HP++
Sbjct: 927  LQAMKMREALYNQDHPELAQSYSNMGVCYERQRNYQKALEYEKKALKMRSRLYEGDHPDV 986

Query: 296  AN-------IYTHLLSENTVGKLK------RALRLEEINKESVESLVIVSKIALEMGSID 342
            A         Y  + S+    +LK      R    ++ + +  ESL  V+     +G   
Sbjct: 987  AESYNNLGICYERIGSDKKALELKIKSLQMRERIYKQEHADVAESLNSVAISYGRIGENQ 1046

Query: 343  QAHAKAMLAMKIA 355
            +A    + A++I 
Sbjct: 1047 KALEHKLKALEIR 1059


>gi|67921469|ref|ZP_00514987.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856581|gb|EAM51822.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 248

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 47/160 (29%), Gaps = 7/160 (4%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                 +  A+   NQ                  R   ++  G    +  D   +LKL  
Sbjct: 68  KSRRGNYQGALKDFNQVIAENP----QDIHAYFNRGYAHSSLGQFEQALADFTIALKLDP 123

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRA 314
             + A +      +   +  KA    EK  ++NP+   A       HL S +        
Sbjct: 124 QMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLAHLNSGSPGLAKIDF 183

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                I+    E+        L++G  + A A    A  I
Sbjct: 184 TEAVMIDPLYGEAYYNRGLALLDLGERENAIADFQKAADI 223


>gi|71902140|ref|ZP_00684168.1| HemY, N-terminal [Xylella fastidiosa Ann-1]
 gi|71728101|gb|EAO30302.1| HemY, N-terminal [Xylella fastidiosa Ann-1]
          Length = 389

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 60/367 (16%), Positives = 124/367 (33%), Gaps = 19/367 (5%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56
           +  L  +FF++ L I S   +   P     DV I  G   Y T+      +L   +    
Sbjct: 4   LRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVLLLW 63

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
            L ++    +        +  +  Y +G+  L  GL ++      LA ++    S+    
Sbjct: 64  SLRSLLVLPI-------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEV 116

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               L     +++A     ++ A+     + +   T    + S    + +  +       
Sbjct: 117 SAIALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLD 174

Query: 177 ATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           A +   + P         ++Q     + +S   T   Q+  +  E+ R     +     +
Sbjct: 175 ALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQ 234

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHPE 294
             D   +   +    ++LK   N +      A  L  +N    + E  LE+ W  N    
Sbjct: 235 AKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN---- 290

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y  L  +    +  RA     ++  S   L+ + ++AL+     QA      A+  
Sbjct: 291 LIRLYGFLPLKEYQTRQNRAEHWLTLHPNSPNLLLTLGRLALQQQQYSQAETFLRRAIDK 350

Query: 355 APRKEIF 361
               E +
Sbjct: 351 ETNAETW 357


>gi|260463120|ref|ZP_05811323.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
 gi|259031241|gb|EEW32514.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
          Length = 159

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 6/135 (4%)

Query: 84  GYKALYTGLMSIAAHNI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           G  ALY  L +IA   + P+A  M +Y        +     L  VQ  +A + Y  A   
Sbjct: 7   GRHALYGLLGAIAVLTVVPVATIMPAYAVDDIEGTDAP--DLTAVQAKIAAKDYKGALAD 64

Query: 143 LEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           L  + Q    ++  VY+L   + R  GD  +A  Y  KAL++ PD     E + + YV  
Sbjct: 65  LRDLAQDN--QQADVYNLLGFTLRKTGDFTTALTYYNKALELKPDHKAAREYLGELYVET 122

Query: 202 KEWSRAITFLNQKKK 216
            + ++A   L   +K
Sbjct: 123 GDMAKAQEQLASLQK 137


>gi|254483181|ref|ZP_05096414.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036552|gb|EEB77226.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 610

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            +  AR      +      +   + +    +A   + Y  A    E  +   +    A  
Sbjct: 193 ELEQARICFERAAA--IAPDVAEIDVSLGNVAFELKDYQTAENCFENAIHKESGYVLAHE 250

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L     ++G  +S       AL   P    +  ++++  + ++ +  A   +++     
Sbjct: 251 TLSELKWQLGKTDSYLSSYEIALKERPQDMALRHSLLRLLINSQRYDEARDLVDRTMHTT 310

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +     RA   +      A+ GD + +  +   SLKL  +
Sbjct: 311 QTPELLRATGELY-----ANDGDYVQARQNFEASLKLAPS 345



 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 12/219 (5%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIA 139
              Y+AL   L  +   N  LA K       +H          L  +         ++ A
Sbjct: 6   RVRYQALLQQLSKLVQSNPKLALKKIQ----EHLRQRPADANFLHLKGLAKADMGLHDAA 61

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            E +   L+    +     +L      IG    A+++   A+ ++P+     + +     
Sbjct: 62  IEAMRASLKAHRQQPEVHNNLANSYKAIGQTERAEQHYRDAITLNPNYLDAFKNLGLLLQ 121

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              + S AITFL +      + +  +A +L A      ++     +      +L++  + 
Sbjct: 122 STGDLSNAITFLQRAV----DLSTQKAPMLTALGNVYREQELFQQAVPCYQAALQINPSY 177

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           + A            +  +A +  E+   +   P++A I
Sbjct: 178 VNAIHNLGLCYKLTEELEQARICFERAAAIA--PDVAEI 214


>gi|157812776|gb|ABV81133.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Tanystylum orbiculare]
          Length = 288

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 6/173 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + +    +    H + L  L    I   +     A    +  L++      A 
Sbjct: 34  GLVQEAEECYGTALRLCPSHADSLNNL--ANIKREQGFTEEATRLYQKALEVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              +    A      +  + D G++  +      +LKL      A    A  L
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDAYCNLAHCL 200



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A        +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYGTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +     ++L++      A    A  L  Q K   A +  ++  ++ P    A+
Sbjct: 66  EQGFTEEATRLYQKALEVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187


>gi|152972399|ref|YP_001337545.1| putative cellulose synthase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150957248|gb|ABR79278.1| putative cellulose synthase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 1342

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 25/275 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188
                 A ++ E +LQ       A+  + + + R GD  +A +Y ++A D+  DA     
Sbjct: 275 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 334

Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               +A+    +   + +     ++Q    +    +       +  L  AD         
Sbjct: 335 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGAQGASAKLFRADVLRHNKDLP 394

Query: 248 DAIESLKLCDNSIMASICAAK-----SLISQNKKRKAEVILEKI-----WKVNPH----- 292
            A ++L+   N    +  AA+      L  QNK  +A+ +L+ +      K+ P      
Sbjct: 395 QAEQTLRSLLNDDPQNA-AARENLYYVLREQNKSAEAQAMLQTLPQSLRQKLQPRVVAGM 453

Query: 293 PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           P  A        + S N  G +           +     + ++++  + G+  +A +   
Sbjct: 454 PGDALRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSLMS 513

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
            A +           A +  + +    +       
Sbjct: 514 AAYRPGASNSALYA-AALFASENGAWQQAQTLLAR 547



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 101/367 (27%), Gaps = 79/367 (21%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           + +   +R      +A   G  ++ + N   A++    V Q +    + L  +    IA 
Sbjct: 253 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 307

Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176
               Y  A + L                   +   Y    ++    + G+++ A      
Sbjct: 308 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 367

Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                 A  A         L  + D P   + +        + + A   L    +   + 
Sbjct: 368 LAQQSGAQGASAKLFRADVLRHNKDLPQAEQTLRSLLNDDPQNAAARENLYYVLREQNKS 427

Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258
              +A+L                          ++      G+   +     E +    +
Sbjct: 428 AEAQAMLQTLPQSLRQKLQPRVVAGMPGDALRRQAQAQVSSGNPAGAIATLREGVARYPD 487

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
                +  A+ L       +A  ++   ++  P    + +Y   L  +  G  ++A  L 
Sbjct: 488 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNSALYAAALFASENGAWQQAQTLL 545

Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359
                  ++               ++ ++  L  G+   A           P+      +
Sbjct: 546 ARIPGGSQTSDMRDLRQRVNYNLQLVTAENYLAQGNTIAASNTLRAMASTPPKAPADAGK 605

Query: 360 IFLLLAQ 366
           +  LLA+
Sbjct: 606 LARLLAE 612


>gi|145499952|ref|XP_001435960.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403097|emb|CAK68563.1| unnamed protein product [Paramecium tetraurelia]
          Length = 680

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 83/225 (36%), Gaps = 23/225 (10%)

Query: 134 RQYNIAHEKLEMMLQIPAT--REFAVYSLYF-ESCRIGDLNSAQRYATKALDISPDAPWV 190
           + Y +A +     +++  T    +    L   E   + D   A +   +AL+++ + P +
Sbjct: 394 KNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELND---AIKDFEQALELNSNNPGI 450

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              + Q Y L K + +A+ +L++  K +          L+ RS    DK +   +  D  
Sbjct: 451 YSGLGQAYRLKKNYEKALFYLDKALKESPHNQE----FLVQRSNIFIDKKEYPKAIIDLT 506

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------HPEIANIYTHL 302
            +L    N          +     + +K+   L K ++  P        H  +   + +L
Sbjct: 507 SALDRKPNDAQIYYRRGLAYYKNQEFKKSIADLYKAFENKPFQSYVPDIHYHLGISFANL 566

Query: 303 LS-ENTVGKLKRALRLEEINKESVESL----VIVSKIALEMGSID 342
              +  +  L  A+ L++     +       ++V +  L +   D
Sbjct: 567 EMFDKAIEPLTNAIDLQKYEPAYIHERAKCFLLVGENQLALEDFD 611


>gi|146306092|ref|YP_001186557.1| TPR repeat-containing protein [Pseudomonas mendocina ymp]
 gi|145574293|gb|ABP83825.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas mendocina ymp]
          Length = 575

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 58/264 (21%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q A A     +A                        +  +G   +A   A    + +P  
Sbjct: 77  QQAQATGDAGVAERAFR------------------IAEYLGAEQAALDTALIWAENAPSN 118

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLEN 236
                A   Q   A  +  ++ F+    K   + + +   L  A           +  + 
Sbjct: 119 IDAQRAAAVQLARAGRYDESMVFMESVLKRQGDTHFDFLALSAAETDPDTRAGLLQGFDR 178

Query: 237 ADKGDMIASYHDAIESLKLCDN-----------SIMAS-------ICAAKSLISQNKKRK 278
                   S     +++ L  +           +  AS       +  A+ L S  +  +
Sbjct: 179 LLAKHPDNSQLLFGKAILLQQDGRAEEALELLEAQPASQTEVSPLLLRARLLQSLKRGDE 238

Query: 279 AEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRAL----RLEEINKESVESLVIV 331
           A  +L+K   +  HP+   +   Y  LL E    +L  A     +L + N    +    +
Sbjct: 239 ALPLLQKG--IRKHPDDKRLRLTYARLLVE--QDRLDEAKGEFSKLVQENPNDDDLRFSL 294

Query: 332 SKIALEMGSIDQAHAKAMLAMKIA 355
           + + LE  + ++A       ++  
Sbjct: 295 ALVCLEAEAWEEAIVYLEELIERR 318


>gi|86138068|ref|ZP_01056643.1| hypothetical protein MED193_01035 [Roseobacter sp. MED193]
 gi|85825095|gb|EAQ45295.1| hypothetical protein MED193_01035 [Roseobacter sp. MED193]
          Length = 267

 Score = 43.8 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 15/135 (11%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI------TFLNQKKK 216
           E  R GD   A     + +   P    +   + Q   +  +W RA+        L+    
Sbjct: 5   EHLRAGDPEQALAALQEQVRADPSNAKLRIFLFQLLCILGDWKRAVAQLRLSAELDAGAT 64

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              +  R   +  + R      + D +               + +A +  A+ +++Q   
Sbjct: 65  VMAQAYREAILCEVYREKVFKGEKDPLILGE---------PEAWLAQLIEAQKMLAQGNT 115

Query: 277 RKAEVILEKIWKVNP 291
            +A  + E  ++  P
Sbjct: 116 DQATALREAAYEAAP 130


>gi|225430656|ref|XP_002270163.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296085167|emb|CBI28662.3| unnamed protein product [Vitis vinifera]
          Length = 986

 Score = 43.8 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 12/143 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G LN A +   +AL I+P        +V  +     + +A   + +      E  R 
Sbjct: 175 MRKGRLNEAAQCCRQALAINP-------LLVDAHSNLGNFMKAQGLIQEAYSCYIEALRI 227

Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +   AI     +    + GD+  +     E++KL      A +       +    ++A V
Sbjct: 228 QPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIV 287

Query: 282 ILEKIWKVNPHPEIANIYTHLLS 304
             ++  +    PE A  Y ++  
Sbjct: 288 CYQRALQTR--PEYAMAYGNMAG 308


>gi|313159809|gb|EFR59165.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 444

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 13/150 (8%)

Query: 126 EVQIALAERQYNIA-----HEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYA 177
           + Q   A      A      +     L+             +L   +   GD       A
Sbjct: 211 KAQFDAAFGLSGAASCENLEKLFRGKLEAAPDDEALLAQAVALMSRAKCDGDFY--FTLA 268

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            K   + P        + Q +    ++++AI +LN+     ++    R +LL+  +L + 
Sbjct: 269 EKYYAVKPS-SETAMFLAQAFQSKGDYAKAIKYLNEALAVEQDPA-ERQLLLVRIALIDL 326

Query: 238 DKGDMIASYHDAIESLKLCD-NSIMASICA 266
              D+  +   A ++  L   + +   + A
Sbjct: 327 VANDIPGAASAARQARDLNPEDGVPYYVLA 356


>gi|163746798|ref|ZP_02154155.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex
           HEL-45]
 gi|161379912|gb|EDQ04324.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex
           HEL-45]
          Length = 565

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 88/244 (36%), Gaps = 33/244 (13%)

Query: 139 AHEKLEMMLQIPATREF-----AVYSLYFESCR------IGDLNSAQRYATKALDI--SP 185
           A      + +   TR         Y +  +  R        D+ +A+     AL+   S 
Sbjct: 300 ATAAQIEVTEQERTRLLPPANLLAYGIVLKGERYLSRYTQKDVQNARSLFEAALESDSSY 359

Query: 186 DAPWVTEAVVQQYVLAKEWSRAIT-FLNQKK---KNAKEWNRNRAILLIARSLENADKGD 241
              +   +     +   +WS      L++     + A E + + A         +  + +
Sbjct: 360 SRAYAASSRTSNLIWRYDWSEDTANSLDEALVFAQRAIEMDGSDARGFGELGFAHLYRKE 419

Query: 242 MIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNP-HPE---- 294
             A+ +    +LKL  N   A++    A +L    +  ++  +L+K  ++NP +P+    
Sbjct: 420 HEAALNAYDRALKLNPN--DANVMSDMADALAHSGRSEESIDLLQKAMRLNPFYPDQYVW 477

Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +   Y +L   +    +K   +++       E   I++     +G  D+A ++A    +
Sbjct: 478 HLGGAYFNLKRYD--DAIKTIQKMQ----NPTEGRRILAASYAYLGRKDEAQSEADRVRR 531

Query: 354 IAPR 357
             P 
Sbjct: 532 AHPD 535


>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 666

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 11/117 (9%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     +AL I+PD     +      +  K +S A+    +  +   +    +A L   +
Sbjct: 310 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSA-WQAWLGRGK 368

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEK 285
           +L+  DK         A+ES +   +   A+  A    A   +   +   A+  LEK
Sbjct: 369 ALDKLDKNQE------ALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEK 419


>gi|86159740|ref|YP_466525.1| hypothetical protein Adeh_3321 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776251|gb|ABC83088.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 453

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 10/261 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            + +   K   +L      E   ++L       G ++ A+    KAL   P        +
Sbjct: 71  DWAVLERKWRAVLDAGEVAEA-RHNLGVALEAQGRVDEARAEYQKALAAKPGLRQAAVNL 129

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                   + + A +      ++  E  R R  L    +    + G +  ++  A E+L 
Sbjct: 130 GVLLEKQGDLAGAQSIYAAVVRDFPEDARARERL----AAMYRNAGQLDEAWRLAREALL 185

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGK 310
               S+ A +  A+  + +     A++IL +  K+ P     P +A        E     
Sbjct: 186 RDPRSVGAYVVMARVSLQRGNLDVAQLILLRAQKLAPSDPELPFLAGEVLAKQGEPEAAA 245

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            +    L  ++   + +   +   A++          A   ++   +     L   + + 
Sbjct: 246 AQWRKALA-LDDGYLPARRALLDAAVKGRRWPVVAEHAQAMVRADAKNAPAWLALGVAKR 304

Query: 371 NSHNTDKILYWTQSALHAMPD 391
           +    D+ L     A  A  D
Sbjct: 305 HLDKPDEALAAYAKAQEASGD 325


>gi|294667769|ref|ZP_06732979.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602395|gb|EFF45836.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 837

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L  +    G   +A  +  KA+DI P         V+ +    ++ +A   L   ++ 
Sbjct: 418 YALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKKATETLRVAEQF 477

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   A+ + +  ++     D   +    I+  +L  +   A   AA  L   N+  
Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADSWIQMAELYPDYAPAQANAAMDLFVANRFA 534

Query: 278 KA 279
            A
Sbjct: 535 DA 536


>gi|226311501|ref|YP_002771395.1| hypothetical protein BBR47_19140 [Brevibacillus brevis NBRC 100599]
 gi|226094449|dbj|BAH42891.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 674

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +    D  +AQ Y  KA  +    P +     + ++     +RA    +Q  +   + + 
Sbjct: 276 ALMENDWETAQSYLAKAHALYALDPDLIRLQGEYFLRTGNKNRAFHTFDQLIR--LDPDN 333

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L   R+    +KGD   +  D  E L        A     K  +   +  KA+ + 
Sbjct: 334 IDAYL--YRARLFLEKGDATDAIKDCEEILTRMPELWDARSLLGKGYLQLGEWEKAQKVF 391

Query: 284 EKIWKVNP 291
           ++I   NP
Sbjct: 392 QEILSHNP 399


>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
 gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 22/272 (8%)

Query: 117 HNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
            NE    LL               A E  ++  ++  +   A  +         +   A 
Sbjct: 56  ENESFSALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAA 115

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               KAL I   +  V E   + Y L  +   A+    +  K   +  +     L  R  
Sbjct: 116 YIIEKALQIDRRSKEVWETKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPK 175

Query: 235 ENA---DKGDMIASYHDAIESLKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILE 284
           +      KG  +       E +K+    +  +       +    +  + ++ R+A   L+
Sbjct: 176 DLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALK 235

Query: 285 KIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K  K++P+       +  +Y           LK      +I+    +S  + +   L + 
Sbjct: 236 KAIKIDPNDKKSWINLGILYK--KRGEYEEALKCFKEAIKIDPNDKKSWYLEA-SVLHIL 292

Query: 340 SID-QAHAKAMLAMKIA-PRKEIFLLLAQIEQ 369
             D +A      A+++    +   LL   + +
Sbjct: 293 ERDSEALKSINRALELDKKYESALLLRRDVAK 324



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 22/172 (12%)

Query: 127  VQIALAERQYNIAHEKLEMMLQ-IPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDI 183
             +          A + +E  ++     +        +Y    ++GDLNSA  YA KA ++
Sbjct: 860  AKAYYKVGDLQEAIKSIERAIEWKKDAKFYLLGSR-IY---LKMGDLNSAYNYANKAFEL 915

Query: 184  SPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK- 239
                    +A +          ++   I  L    K   + N   A+ L+ ++LE  ++ 
Sbjct: 916  ----EDSDDARINLASIMFELGKYDDVIALL----KPLGKNNNLDALRLLGKALEAEERY 967

Query: 240  GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             D +  Y+  ++  K   +S    I   +  ++ NK  +A    E+   ++P
Sbjct: 968  EDAVKIYNKVVDIDKKDKSSW---ISLGRCYLTLNKYNEAIKAFERASLIDP 1016


>gi|196232459|ref|ZP_03131312.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196223531|gb|EDY18048.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 672

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 80/244 (32%), Gaps = 14/244 (5%)

Query: 121 LVYLLEVQIALA---ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +  L  +QIAL      +   A      +L +      A++ L   + ++G    A    
Sbjct: 1   MTTLQAMQIALQHHQSGRLADAEAIYRQILAVEPRHADALHLLGVIAHQVGQHEGAIELI 60

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+ ++P+       + + Y ++     AI    +            + L         
Sbjct: 61  GEAVQLNPNDAAALCNLGEAYRVSGRLEEAIVAYRRALCIQPGQPEACSNL----GNVLR 116

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             G M  +      + +L    + A +  A +L    +  +A        +++PH   A 
Sbjct: 117 SVGRMDEAIDACRRATQLRPGYVEAHLNLANALSEHGRSEEALAEYRCALEIDPH--HAE 174

Query: 298 IY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +       +  +  V       +  +   +   +   +  +  E G  D+A A    A+
Sbjct: 175 AWNSYGSALVGMQRLVEAEAAFRQAIQWQPQHAGAWSNLGGVLAECGRHDEAVAAYRRAL 234

Query: 353 KIAP 356
           +I P
Sbjct: 235 EINP 238


>gi|156553220|ref|XP_001599238.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
          Length = 809

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 54/182 (29%), Gaps = 17/182 (9%)

Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L  +L  Q      + + A E   E +   P   +   Y+L        +   A     +
Sbjct: 480 LGSVLSAQ-----GRVDEAEEAFIEALRYRPNMADV-HYNLGILQQGRRNYEEAILSYQR 533

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-------KKKNAKEWNRNRAILLIAR 232
           A+   P        +    V     + A+  L           K+ K     R   L+  
Sbjct: 534 AIHFRPSLAQAYVNLGATLVSVGRGTEAVAVLRAGASLDGSALKDKKAHEAARVQALLQL 593

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI---CAAKSLISQNKKRKAEVILEKIWKV 289
               A++G +  +     E+L++  +            ++L    +  +AE   +     
Sbjct: 594 GSLYAEQGRLHKALSSYREALRMLPDHYPPQSVYNLLGETLSRLQQYNEAEKWFQASLAS 653

Query: 290 NP 291
            P
Sbjct: 654 QP 655


>gi|118091214|ref|XP_420968.2| PREDICTED: similar to KIAA0155 [Gallus gallus]
          Length = 1265

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 102/305 (33%), Gaps = 41/305 (13%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 556 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 615

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +  + +L+           L   +   G+   A  +  +AL I+ D P     +   ++ 
Sbjct: 616 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 675

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHDA 249
            +EW        +  K     N   ++L +            R  E  +K     +    
Sbjct: 676 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIY 734

Query: 250 IESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIY 299
            + L+    N   A    ++ A K    + +      R+A   +  +W       +A+IY
Sbjct: 735 KQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIY 789

Query: 300 THLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                  +  ++      +  +   ++ E L+ +++   + G + +     + A  +AP 
Sbjct: 790 VEQKQYISAVQMYENCLRKFYKH--QNTEVLLYLARALFKCGKLQECKQTLLKARHVAPS 847

Query: 358 KEIFL 362
             + +
Sbjct: 848 DTVLM 852


>gi|88602877|ref|YP_503055.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88188339|gb|ABD41336.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 252

 Score = 43.8 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 38/115 (33%), Gaps = 4/115 (3%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFES 164
            ++ +      +    + ++ + +     Y+ A       +++  T    +    L    
Sbjct: 87  DAFTAAIRIQPDYPEAWFMKGRASYMMGDYDEAVRSFYKAIELDETNTEYWYHRGLAL-- 144

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
              G  + A  +  K L ++P       +    YV+ K ++ A+    +  K   
Sbjct: 145 SGRGQYDLAISHFDKILQMNPSLEKAWSSRGYAYVMEKNYNDALDSFEEALKINP 199


>gi|326498109|dbj|BAJ94917.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 986

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 16/208 (7%)

Query: 144 EMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           E +   P  +    Y     +    GD++ A RY   A+ + P+       +   Y    
Sbjct: 121 EALAIDP--QFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKG 178

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             + A     Q        N                +G +  +Y   +E++++  +  +A
Sbjct: 179 RLNEAAQCCKQAL----VLNPRLVDAHSNLGNLMKAQGLVQEAYTCYLEAIRIDPHFAIA 234

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY-THLLSENTVGKLKRALR 316
               A   +      KA    ++  K+ P     H    N+Y    + +  V   +RA  
Sbjct: 235 WSNLAGLFMEVGDLNKAMQYYKEAVKLKPSFADAHLNQGNVYKAMGMLQEAVACYQRA-- 292

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQA 344
             +   +   +   ++ I  E   +D A
Sbjct: 293 -LQARPDYAMAYGNLATIYYEQRQLDMA 319


>gi|262199345|ref|YP_003270554.1| hypothetical protein Hoch_6186 [Haliangium ochraceum DSM 14365]
 gi|262082692|gb|ACY18661.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365]
          Length = 2910

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 82/259 (31%), Gaps = 16/259 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           E    +A      +      R   +    +    +    D   A ++   A  + P+   
Sbjct: 365 EGDERVAAAHFIRLTAEAERRGDPDVGFCASLAAAELQPDEKQAAQHYQHAAALHPEHRA 424

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
             E + +++   + W   +  L  ++ ++ E     A L+    + +   G    +    
Sbjct: 425 SGETLAERFTAEERWDE-LAELLARRIDSSEQREQVADLVRLAEILHRHLGRDEQARERL 483

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
             + K+   SI A    A+  ++  ++R A   L  +         AN++     E    
Sbjct: 484 ARARKIDPVSIPALELEAELDLAAGQRRAAIERLGHV---------ANLWLRQDDEQAAA 534

Query: 310 -KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQI 367
               R   L  +  E  E+     +      +  +A +  A+LA +        +L  Q+
Sbjct: 535 HAFARTGTLWALEGELEEADNAFGEALALSENAPEALYGAAVLAAQRGKHAAATMLFEQL 594

Query: 368 EQA-NSHNTDKILYWTQSA 385
           +         +  +    A
Sbjct: 595 DAVEERTPAQRARHRLALA 613



 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 63/216 (29%), Gaps = 17/216 (7%)

Query: 143  LEMMLQ-IPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
             E + +             +Y ++        A R   +A   +PD   +   + +  + 
Sbjct: 2229 YERLSEPRHRAHLLLRRGRIYRDALEREAE--AYRCFKQAHSAAPDDGEIAGELRRLAMA 2286

Query: 201  AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
              EW+ A   L ++   A   +   A+ +    L +    D   +      +L L     
Sbjct: 2287 RGEWAIAAELLRREIAAAPTTDAAGALEMELAVLYDEHLLDAERARQHYERALALAPALP 2346

Query: 261  MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEE 319
             A    A+      +   A  + E                H   +    + L RA    E
Sbjct: 2347 GAPRPLARLYELAGRHADAAHMNEMA------------AAHARDDFQRSRLLYRAAVSAE 2394

Query: 320  INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               ++  +  +    AL     + A A     +++ 
Sbjct: 2395 RTGDAAGARRLYHLAALAAPEGEDASASHRALVRLD 2430



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 7/180 (3%)

Query: 87   ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
            A   G+++        A + ++   +    H E L     +++AL       A      +
Sbjct: 2600 AYRRGVIAETLGYQREALESYARAVEIRPAHREALDA--LLRLALERGDLPRAIHASRAL 2657

Query: 147  LQIPATREFAVYSLYFESC-----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            + +    +    SL          R GDL++A  YA   +   P +    E +V+ Y   
Sbjct: 2658 IDLMPADDVGSISLARLRLAALCERAGDLDAALEYAEMVVSEEPGSQTALEVLVRLYEQK 2717

Query: 202  KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
                RA   L +         +  A+L     LE   + D+ ++    ++++ L  + + 
Sbjct: 2718 GAHDRAALALRRLIGLVSTPVQRAALLYHLGELERVHRHDLDSAADAYLKAIDLDPHHVP 2777



 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 87/282 (30%), Gaps = 28/282 (9%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
                + T     L  LL  +    + +   A    +               LY    R+ 
Sbjct: 2496 KSQAEATHDWTALASLLNARAVSLKDRNERAAVYYD----------LGR--LYQ--VRLD 2541

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  SA +   + L   P  P   EA+ +      +W RA     + +            L
Sbjct: 2542 DPESAVKAFERTLAADPAHPAALEALGELAFAQSDWQRARQLYARLRPETCAMPSEE--L 2599

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
               R +     G    +      ++++      A     +  + +    +A      +  
Sbjct: 2600 AYRRGVIAETLGYQREALESYARAVEIRPAHREALDALLRLALERGDLPRAIHASRALID 2659

Query: 289  VNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            + P  ++ +I             + +    L+ A  +      S  +L ++ ++  + G+
Sbjct: 2660 LMPADDVGSISLARLRLAALCERAGDLDAALEYAEMVVSEEPGSQTALEVLVRLYEQKGA 2719

Query: 341  IDQAHAKAMLA--MKIAPRKEIFLL--LAQIEQANSHNTDKI 378
             D+A         +   P +   LL  L ++E+ + H+ D  
Sbjct: 2720 HDRAALALRRLIGLVSTPVQRAALLYHLGELERVHRHDLDSA 2761


>gi|242012383|ref|XP_002426912.1| smile protein, putative [Pediculus humanus corporis]
 gi|212511141|gb|EEB14174.1| smile protein, putative [Pediculus humanus corporis]
          Length = 712

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 59/188 (31%), Gaps = 33/188 (17%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +++ Y  + +W    +  N    +        A +    +    D G++     + 
Sbjct: 424 AIVFLIRSYERSSDWKTEESLFN----SGSLVCPLNAKVHYNIAKSAVDSGNIDKGIKEY 479

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
            E+++L  N   A    A  L SQ + ++AE +L K                +  E    
Sbjct: 480 REAIRLFPNYDQALNNLANILKSQGELKEAEDMLRKA-------------LDIRKEFPAA 526

Query: 310 KLKRALRLEEIN----------------KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +   + L +IN                K   +    +  + L     D+A      A+K
Sbjct: 527 WMNLGIVLTQINKYSEAEECYKNALKYRKYYPDCHYNLGNLYLAQKKYDEAEMAWTSAIK 586

Query: 354 IAPRKEIF 361
           + P   + 
Sbjct: 587 LKPTMSLA 594


>gi|124485501|ref|YP_001030117.1| extracellular ligand-binding receptor [Methanocorpusculum labreanum
           Z]
 gi|124363042|gb|ABN06850.1| Tetratricopeptide TPR_2 repeat protein [Methanocorpusculum
           labreanum Z]
          Length = 1073

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 63/210 (30%), Gaps = 17/210 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A +   AR +                     +  +   +Y  A    + +++       A
Sbjct: 438 AGDA-AARVLAKSPDNIAALER-------HAESMMLAGKYKEAAGSWQKLVEAAPENTLA 489

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV--QQYVLAKEWSRAITFLNQK 214
              L       G    A++ A   L        +T  ++     + A  +  A+T  + +
Sbjct: 490 YIGLLKACSGTGKYAEAEQLAGHLLK-EYQPRDLTITLLAGDAALSAGNYEEAVT--HYQ 546

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
              A   N     + +  + E    GD   +      + ++  +     +   +      
Sbjct: 547 NAVALSSNTPAPYIGLGSAYEML--GDYEKAVEAFSSADEILPDRPGILLNLGRVQAEAG 604

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           + + A      I  +N HP+IA    H+ +
Sbjct: 605 QNKAAAQTYLGI--MNNHPDIAGAAVHVTT 632



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 6/170 (3%)

Query: 112  QQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
             + T  +      L     +     +Y  A    + ++                S +IG+
Sbjct: 886  AELTLKDPENTAALFGYAEMLSRMGKYPEAVRHFDKLIGKYPRNSLLHIEKALASIKIGE 945

Query: 170  LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
                    T A    P  P+V   +    ++    + A+   ++ +            L 
Sbjct: 946  PADITSDMTTAAQADPKNPYVLSGLGFMQMVTGHPTEALAAFDKAETAGC----KDPDLN 1001

Query: 230  IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              R L    +     +   A   LK   + + A    A+SL S  + ++A
Sbjct: 1002 FCRGLIYLQQNRFDMAEKAADHILKNDPDHMPAMHLKARSLESVGRLKEA 1051


>gi|21229444|ref|NP_635366.1| hypothetical protein MM_3342 [Methanosarcina mazei Go1]
 gi|20908041|gb|AAM33038.1| conserved protein [Methanosarcina mazei Go1]
          Length = 417

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 48/168 (28%), Gaps = 11/168 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+G    A   + KAL  +        A          +  AI   +   K      R  
Sbjct: 157 RLGQQEKALEASEKALAFNSRLAGAWHAKGSALSDLGRYEEAIQAYDAALKIKPNMAR-- 214

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                 ++         + S      +LK+  ++       A   +   K +KA     K
Sbjct: 215 --AWEGKAFALYSLDRPVESIIAYDSALKINPDNAKTWTGKAMVHLRLGKYKKALDPCNK 272

Query: 286 IWKVNPHPEIANIY----THLLS-ENTVGKLKRALRLEEINKESVESL 328
              +   P+ A+ +      L   +     L    R   I+ E  ++ 
Sbjct: 273 AITIK--PDSADAWYCKGVALSGLDKDEEALGALERAIRIDPEHADAR 318


>gi|312795458|ref|YP_004028380.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica
           HKI 454]
 gi|312167233|emb|CBW74236.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica
           HKI 454]
          Length = 391

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 91/256 (35%), Gaps = 27/256 (10%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L         R+ A+Y L  +  + G L+ A+    +          
Sbjct: 84  GETERAIRVHQNLLSREDLPANERDHALYELGQDFLKAGLLDRAEETFQRLHSGGYALG- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  + + K+W +AI    + +       ++  +      + E      +  + + 
Sbjct: 143 ALRALLTIFEIEKDWHKAIEAAQRIEAMGVPPLDKEISQFHCELAQEALQHKRIDEARNA 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-- 306
             ++L+    ++ A+I +    ++ ++  +A     ++ + NP       Y  L+++   
Sbjct: 203 LQQALRCNPQNVRATILSGDVEMACHEPTRALEHWRQVEQQNP------AYLPLVADKLM 256

Query: 307 -----TVGKLKRALRLEEINKESVESLVI------VSKIALEMGSIDQAHAKAMLAMKIA 355
                T    + A  L    +    + ++      ++++     +   A  +   +  +A
Sbjct: 257 QAYAATGQSAQGAALLTRYVEAYPSNDLLDAAYKHIAELRGAQAAHALARTQMQKSPNLA 316

Query: 356 PRKEIFLLLAQIEQAN 371
                 LL AQI  A+
Sbjct: 317 GMTR--LLEAQIAVAD 330


>gi|225619887|ref|YP_002721144.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214706|gb|ACN83440.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 612

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 17/179 (9%)

Query: 71  MLFHMLHKR---NYDKGY-----------KAL-YTGLMSIAAHNIPLA-RKMHSYVSQQH 114
            L     +R      KGY           +AL Y GL+++      +A   +   V +  
Sbjct: 144 TLGRFYMERDLPRLAKGYYERVLTLEENDEALFYVGLIALNEGFQSVAYDTLTKLVRRSK 203

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
             + +    +L   I +     + A E     L    T+  ++  L     ++ D +  +
Sbjct: 204 GEYADKAATIL-GDIYVISGDTDSAIEMYLKSLVNSDTKPDSIKRLVKIYEQVEDYDGIK 262

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           +   + L+ +P+      A+ + Y     + RAI +  +  K     N   A  L+A +
Sbjct: 263 KVYEQILEQNPNDVDTILALGELYEKENAYDRAIKYYLKLVKMKDYTNTYGATGLLANA 321


>gi|253701958|ref|YP_003023147.1| radical SAM protein [Geobacter sp. M21]
 gi|251776808|gb|ACT19389.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 564

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            SY +Q+      ++  +L  +    +  +  A      M++      + V  L     R
Sbjct: 428 ASYAAQRALLGYCFVTEMLCAESLEQQGDWEGALRLYRGMVKAEPDNPWGVLQLGGLQAR 487

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +GDL  A R   KAL + P       A+ +  +   +   A  +  +  K
Sbjct: 488 MGDLKGASRSYQKALQLVPRHLPALLALGELALAQGDGPGAARYYAEALK 537



 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 4/93 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GD   A R     +   PD PW    +        +   A     +  +        
Sbjct: 452 EQQGDWEGALRLYRGMVKAEPDNPWGVLQLGGLQARMGDLKGASRSYQKALQLVP----R 507

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               L+A       +GD   +     E+LKL  
Sbjct: 508 HLPALLALGELALAQGDGPGAARYYAEALKLDP 540


>gi|119509498|ref|ZP_01628646.1| TPR repeat protein [Nodularia spumigena CCY9414]
 gi|119465904|gb|EAW46793.1| TPR repeat protein [Nodularia spumigena CCY9414]
          Length = 292

 Score = 43.8 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 14/144 (9%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------- 176
           +L  Q          + +    +L        A+  +           +A          
Sbjct: 119 VLLAQAKQQMGDLEGSAQAYRSILDTKPGDLKALQGMVALLVDQQRPEAAIGLLEDTLSN 178

Query: 177 ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           A  A  I P +      + ++   +   K +  A +  +Q  K  K+    R +L  A++
Sbjct: 179 AEPANKIQPGSVDTVAIQVLLGTVHASQKRYPEATSIYDQAIK--KDPQDFRPVL--AKA 234

Query: 234 LENADKGDMIASYHDAIESLKLCD 257
           +   ++G +  +      ++ L  
Sbjct: 235 MLFREQGKVEEAKPLFDSAVALAP 258


>gi|329851367|ref|ZP_08266124.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
 gi|328840213|gb|EGF89785.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
          Length = 638

 Score = 43.8 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 73/234 (31%), Gaps = 29/234 (12%)

Query: 122 VYLLEVQIALAERQYNIAHEK----------LEMMLQIPATREFAVYSLYFESCRIGDLN 171
             L   Q+A  + + + A  +             + Q        +          GD  
Sbjct: 7   AQLKAAQMARQQGRNDDALARLAHLQTLYPRFSRLYQEQGHCHVGL----------GDTA 56

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           SA     +A+ ++P  P   + + Q Y L                             + 
Sbjct: 57  SAIAALQEAVRLNPTLPASWDMLEQLYRLTG------VPAQAAAAAQTLAQLRSLPPQVV 110

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +      GD+  +     + L    ++I A+   A+ L    +  +AE +LE++    P
Sbjct: 111 VANSLYADGDLKEAEDVIRDYLDCDADNIGAARMLARILNDDGRLDEAEALLEEVLARAP 170

Query: 292 --HPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             H   +      L S+  +   ++A  L   N +  + L   +   + +G  +
Sbjct: 171 DYHAARLDYALVLLQSQKPLPARQQAEHLLAHNPDHRDYLKQYAAACVALGDYE 224


>gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera sp. 301]
 gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera sp. 301]
          Length = 1193

 Score = 43.8 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 72/220 (32%), Gaps = 22/220 (10%)

Query: 91  GLMSI--AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
           GL +   A   +P A          +    E L  L    +     + + A      +L 
Sbjct: 213 GLGAAFQATGQLPGAEANFRKAIAINPNDAEALSNL--GGVLKTLGRLSEAEICYRTLLT 270

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           I          L      +G++  +     KAL I+         +         +S A 
Sbjct: 271 ITPENFDTYIKLGSLLKSMGNIAESTACFKKALSINSQLEEAQNDLGLALAEQGRYSEAE 330

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY------HDAIESLKLCDNSIMA 262
                  K    +   +A   +  +L N  + +   +        DA E+L   + S+  
Sbjct: 331 ACYQNAIKIEPNF--WKAYNNLGLTLYNMGRFNEAEAAFDKAITLDANEALIYSNLSLP- 387

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                  L++Q + ++AE  L +  +VN  PE  N Y +L
Sbjct: 388 -------LVAQGQIKRAEACLRRAIEVN--PEYVNAYINL 418


>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 747

 Score = 43.8 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 66/207 (31%), Gaps = 22/207 (10%)

Query: 161 YFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
             E+ R +G    A     +AL + PD       +    V   +   AI    +      
Sbjct: 78  LGEAYRGLGKFEEAVASFRRALQLKPDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKP 137

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNK 275
           ++      L IA + +            +A E L+       A   A       L  Q +
Sbjct: 138 DYVDAHNNLGIALARQGV--------MTEATEVLRRALQLAPADAGAWNNFGIVLAEQGR 189

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLV 329
             +A     +  ++ P     H    N    L   E+ V   +RA    E+  +S E   
Sbjct: 190 FGEAVEAYRRALELAPNQPEAHNNFGNACKELGQFESAVAAYRRA---VELRPDSAEFQA 246

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +     E G  D+A A    A+ + P
Sbjct: 247 NLGNGLREQGRFDEAMAAYRHALALQP 273



 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 78/277 (28%), Gaps = 13/277 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+ ++      LA  + + V+      N   V+    +      ++  A       LQ+ 
Sbjct: 45  GVAAMQTGRAELAVNLLNRVAA--LVPNHPAVHSNLGEAYRGLGKFEEAVASFRRALQLK 102

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A Y+L       G L  A     + L + PD       +          + A   
Sbjct: 103 PDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNLGIALARQGVMTEATEV 162

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L +  + A       A       +  A++G    +      +L+L  N   A      + 
Sbjct: 163 LRRALQLAPA----DAGAWNNFGIVLAEQGRFGEAVEAYRRALELAPNQPEAHNNFGNAC 218

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
               +   A     +  ++   P+ A    +L             +        +  +  
Sbjct: 219 KELGQFESAVAAYRRAVELR--PDSAEFQANLGNGLREQGRFDEAMAAYRHALALQPKRA 276

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           E+   +       G +D A       +++ P   +  
Sbjct: 277 ETHHEMGNALAGQGQLDAAVLAYRATLELKPDYGVAR 313


>gi|148256898|ref|YP_001241483.1| SPINDLY family O-linked N-acetylglucosamine transferase
           [Bradyrhizobium sp. BTAi1]
 gi|146409071|gb|ABQ37577.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. BTAi1]
          Length = 739

 Score = 43.8 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 106/318 (33%), Gaps = 39/318 (12%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
            + K+N  +    L   + +  A     A+ +   +      H + L +LL    AL   
Sbjct: 14  RMQKKNRKQADGLLTQAVAAYRAGRHADAQAVCGQILALVPDHFDAL-HLLGA-SALDNG 71

Query: 135 QYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + ++A + L   +   P   E  A   L   S +      A+    +A+ + P+      
Sbjct: 72  RLDLAEQALTRAVAVEPRNAEAQANLGLVLSSLKR--YEEARAAQERAIALKPNFATALT 129

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR---SLENADKGDMIA 244
            +    +  + +++AI   ++      ++     NR  A LL+ R   + ++ ++   +A
Sbjct: 130 GLGNTLMNMRLFAQAIEAHDRAIALKPDFADAYCNRGMAQLLLLRNEEARQSFERALALA 189

Query: 245 SY------------------HDAIESLKLCDNSIM--ASICA--AKSLISQNKKRKAEVI 282
                                 A+ +           A++ A   +  +   + ++AE  
Sbjct: 190 PRHMQATFGKGLVSVNLRHFDQALVAFNAALALKPGAAAVIAQRGRLYVQMGRFKEAETD 249

Query: 283 LEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +      P      +   +  +L++     +    R+ E N  S  +L  +       G
Sbjct: 250 FDTALTAEPMLEAALLGKAHVCVLTDRIAPAMAACKRVLEHNPASEIALAWLGACFARQG 309

Query: 340 SIDQAHAKAMLAMKIAPR 357
               A      A++I P 
Sbjct: 310 DTAAAIQHFDRALEIKPD 327


>gi|325914215|ref|ZP_08176565.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325539470|gb|EGD11116.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 929

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 95/311 (30%), Gaps = 44/311 (14%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQ-----------IAL 131
           AL  G  ++ A N+ +A +  + V +      E L  L    L  Q            A 
Sbjct: 283 ALSEGFRALNAGNLGVAEQRFTQVLRARARDAEALGGLGSVRLRQQRFAEAQELLRPAAA 342

Query: 132 AERQYNIA---HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              ++  A       + + Q               +   GD+  A++   +++ + P+ P
Sbjct: 343 NSGKWKGALDSARYWQQLQQAD------------AARTRGDIAQARQLVEQSVQLLPNEP 390

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASY 246
                 +     A +   A     +      +        + L +R    ++  ++    
Sbjct: 391 -AGHVALGGLQSASDPVAAEASYRKALSRDADNAGALQGLVGLYSRQGRMSEASELFNRL 449

Query: 247 HDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299
             A  +    +  + +++    A+  +       A+  LE      P       ++A +Y
Sbjct: 450 PAAERAKSGGEALLRSNVQRARARQSLEAGDAVSAQAELEAAMVERPGDAWIRLDLARLY 509

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM--LAMKIAPR 357
                 +    +     L  ++ +  E+L   + +A E G    A+       A    P 
Sbjct: 510 QQAGRPDQARSV--MDGLLAVHGDQPEALHANALLAQESGDWQGAYDSLDRIPAAARTPE 567

Query: 358 KEIFLLLAQIE 368
                  A IE
Sbjct: 568 MTQLRTTAWIE 578


>gi|331646606|ref|ZP_08347709.1| putative heat shock protein [Escherichia coli M605]
 gi|281178472|dbj|BAI54802.1| putative heat shock protein [Escherichia coli SE15]
 gi|330911148|gb|EGH39658.1| putative periplasmic heat shock protein YciM, precursor
           [Escherichia coli AA86]
 gi|331045358|gb|EGI17485.1| putative heat shock protein [Escherichia coli M605]
          Length = 389

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 62/281 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL +Q      +A   Y+ A +    +     T 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++Q Y    EW +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  R   A      +L++    D+  +     +      NS   SI   +  ++
Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331
           + +  KA   L+++   +           L+SE          +L +  + +      V 
Sbjct: 227 KAEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277

Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361
               +   L +  I +A   +  A       ++  P   +F
Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318


>gi|326316278|ref|YP_004233950.1| type IV pilus biogenesis/stability protein PilW [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323373114|gb|ADX45383.1| type IV pilus biogenesis/stability protein PilW [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 280

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 4/124 (3%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L F   R+GD  SA     +ALDI+P  P++           K ++ A  F ++   
Sbjct: 101 LRGLVF--MRLGDWPSADDSFRRALDINPQEPYLLHNYGWLRCQQKNYAEAERFFDRAL- 157

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A      RA  L+ + L     G +  +     ++ +L   + +     A     +   
Sbjct: 158 -AVPSYTARAKTLMTQGLCQERAGQVAEAEKTLAKAYELDAGNPVVGYNLASMAFRRGDA 216

Query: 277 RKAE 280
           ++A+
Sbjct: 217 KRAQ 220


>gi|325181663|emb|CCA16115.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 620

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 82/265 (30%), Gaps = 24/265 (9%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A ++  A  ++      +  H   ++    +Q            E  E    IP  ++  
Sbjct: 339 AGDMTQAEALYRDALNIYPDHVPSIMSFAILQA--RGGNVQAGRELFEQ--SIPIVKKVG 394

Query: 157 ----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                +  + E  + G+L+ A++   +     P       ++ +          A   L 
Sbjct: 395 SLLFAWGSFEE--QYGELSHAKQILEETTAKEPMHLEAWRSLARVENKLGNSENARVVLT 452

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  ++ +    N   LLI  +       ++  +     ++L+L   +       A   + 
Sbjct: 453 RAAQHVE----NNIPLLIQLAKNEERNHNIDEARRALEKALELDKENGSVWNLRALLELR 508

Query: 273 QNKKRKAEVILEKIWKVNP------HPEIANIYTHLLS--ENTVGKLKRALRLEEINKES 324
               +K   ++E   K  P      H  +   Y   L+  ++     K   +  ++   +
Sbjct: 509 I-DPKKTRSLVESALKCIPEHEAHTHSILYCTYGRALAMVQDYEAAAKAFEKSLQLIPRN 567

Query: 325 VESLVIVSKIALE-MGSIDQAHAKA 348
            E+ VI     L      + A    
Sbjct: 568 PETHVIYVDSVLIPSERWNDAEKHL 592


>gi|77458879|ref|YP_348385.1| hypothetical protein Pfl01_2654 [Pseudomonas fluorescens Pf0-1]
 gi|77382882|gb|ABA74395.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 351

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 99/337 (29%), Gaps = 41/337 (12%)

Query: 41  PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100
             + L ++     AW+ L + +      P  + H         GY      L +  A   
Sbjct: 8   LLISLGLVLALFVAWLSLRSTAPVV---PEAIKH---------GY---SEALAAARAGQP 52

Query: 101 PLARKMHSYVS------QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-TR 153
             AR ++  +       ++  + +  L      Q                 +  I + T 
Sbjct: 53  GAARVLYQQLGRPDLSVKRRVWLHAELPNYPSPQALKLADADLQNQSPEVRLAAIKSVTG 112

Query: 154 EF--AVYSLYFESCRIGDLNSAQRYATKAL-DISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                  SL        +  + +  A  AL  +SPD   +  A +QQ          I  
Sbjct: 113 LVPGGQRSLLLGPLLDDEDQTVRFAAINALLGLSPDQLGLYFAPLQQ---------GIDV 163

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             Q  K+  E     A      +       ++  +     ++L+L   ++ A +   + L
Sbjct: 164 WEQALKSQPES----AANYAQLARLYLHNAELKQAQQALEQTLRLDPGNLPALVMQIEVL 219

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVES 327
             Q +   A  +L +  K  P          L     +     L    +  E+  ++ + 
Sbjct: 220 DRQGQSDAARQLLARQLKAQPDSAYLQHALGLWLLHHDQREYALLGLSKAVELEPDNKDY 279

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
              ++        ++ A  +    ++  P      +L
Sbjct: 280 RYDLATTLHSAEELEAAQKQLQEIVQRHPADRKARVL 316



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 21/200 (10%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA-------RSLENADKGDMIASYHDAIESLKLCDN 258
            A   L Q+        + R  L          ++L+ AD      S    + ++K    
Sbjct: 53  GAARVLYQQLGRPDLSVKRRVWLHAELPNYPSPQALKLADADLQNQSPEVRLAAIKSVTG 112

Query: 259 SIMA---SICAAKSLISQNK-KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
            +     S+     L  +++  R A   +  +  ++P  ++   +  L     V      
Sbjct: 113 LVPGGQRSLLLGPLLDDEDQTVRFAA--INALLGLSPD-QLGLYFAPLQQGIDV-----W 164

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
            +  +   ES  +   ++++ L    + QA       +++ P     L++ QIE  +   
Sbjct: 165 EQALKSQPESAANYAQLARLYLHNAELKQAQQALEQTLRLDPGNLPALVM-QIEVLDRQG 223

Query: 375 T-DKILYWTQSALHAMPDPL 393
             D         L A PD  
Sbjct: 224 QSDAARQLLARQLKAQPDSA 243


>gi|296220726|ref|XP_002756432.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 1 [Callithrix jacchus]
          Length = 478

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 17/149 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L    +   
Sbjct: 223 LALKLQDEGQEAEGEKYVEEALTSMSSQTYVFRYAAKFYRRKGSVDKALQLLKMALQATP 282

Query: 220 EW---NRNRAILLIARSLENADKGD----------MIASYHDAI----ESLKLCDNSIMA 262
                +    +   A+ ++  +             +      AI     +++      +A
Sbjct: 283 TSAFLHHQIGLCYKAQVIQIKEAAKGQPRGQNRERVDKMIRSAIFYFESAVEKKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +  A+  I     RKAE I +K+ ++NP
Sbjct: 343 HLDLARMYIDAGNHRKAEEIFQKLLRMNP 371



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 46/149 (30%), Gaps = 24/149 (16%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +L+  D+G          E+L    +       AAK    +    KA  +L+   +  P
Sbjct: 223 LALKLQDEGQEAEGEKYVEEALTSMSSQTYVFRYAAKFYRRKGSVDKALQLLKMALQATP 282

Query: 292 -----HPEIANIYTHLL-----------SENTVGKLKR--------ALRLEEINKESVES 327
                H +I   Y   +                 ++ +             E       +
Sbjct: 283 TSAFLHHQIGLCYKAQVIQIKEAAKGQPRGQNRERVDKMIRSAIFYFESAVEKKPTFEVA 342

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + ++++ ++ G+  +A       +++ P
Sbjct: 343 HLDLARMYIDAGNHRKAEEIFQKLLRMNP 371


>gi|149631899|ref|XP_001506573.1| PREDICTED: similar to KIAA0155 isoform 2 [Ornithorhynchus anatinus]
          Length = 1165

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 104/306 (33%), Gaps = 43/306 (14%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517

Query: 141 EKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           +  +  + + P   +  +  L   +   G+   A  +  +AL I+ D P     +   ++
Sbjct: 518 KLYKNILREHPNYVDCYLR-LGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHL 576

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHD 248
             +EW        +  K     N   ++L +            R  E  +K     +   
Sbjct: 577 AKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAI 635

Query: 249 AIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANI 298
             + L+    N   A    ++ A K    + +      R+A   +  +W       +A+I
Sbjct: 636 YKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHI 690

Query: 299 YTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           Y       +  ++      +  +   ++ E ++ +++   + G + +     + A  +AP
Sbjct: 691 YVEQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAP 748

Query: 357 RKEIFL 362
              + +
Sbjct: 749 SDTVLM 754


>gi|329115092|ref|ZP_08243847.1| TPR repeat-containing protein [Acetobacter pomorum DM001]
 gi|326695535|gb|EGE47221.1| TPR repeat-containing protein [Acetobacter pomorum DM001]
          Length = 630

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 96/298 (32%), Gaps = 11/298 (3%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             AR M  +         E  + L E+QI         A E L  + Q       A   L
Sbjct: 331 EAARLMLGFALAMDPTLAEARLMLAEIQIDEDHG--AAARETLLRVPQSDPMSPVARLRL 388

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                       A       +   PD   +  A+    V  K+W  AI    +    A  
Sbjct: 389 AVLDSTPDQATEAVNLLRPLVAQLPDQILLQRALGNALVQQKDWKGAIAAYTKAIDLATA 448

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKA 279
                  LL  R++   + GD   +  DA  +L    +  M       S++ ++    +A
Sbjct: 449 QKDVDWTLLFLRAMVYHEMGDWPHARDDARAALAYAPDESMLLNFLGYSMVERHENLPEA 508

Query: 280 EVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           E +L K  +++  P+ A I     +      +    L    +  E   E  E    + ++
Sbjct: 509 EKLLRKAHQLS--PDDAAITDSLGWVRAERGDLNEALDLLEKAAEKTPEDPEVNYHLGEV 566

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
               G   +A  +  +A+ + P      L+ A +++A      K       A  A  D
Sbjct: 567 YWRQGRKTEAIDQWNVALGLHPIPSDEVLIRAALKRAGVEPDVKKADQAAPAKVAPQD 624


>gi|325202341|gb|ADY97795.1| tetratricopeptide repeat protein [Neisseria meningitidis
           M01-240149]
 gi|325207906|gb|ADZ03358.1| tetratricopeptide repeat protein [Neisseria meningitidis NZ-05/33]
          Length = 614

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302

Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     A  A       ++    L A +  A+  +
Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMIYADRRD 358

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 359 YAKVRQWLKK-VSAP 372


>gi|195434541|ref|XP_002065261.1| GK14760 [Drosophila willistoni]
 gi|257096369|sp|B4MUQ2|FICD_DROWI RecName: Full=Adenosine monophosphate-protein transferase FICD
           homolog
 gi|194161346|gb|EDW76247.1| GK14760 [Drosophila willistoni]
          Length = 498

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 68/239 (28%), Gaps = 41/239 (17%)

Query: 25  PE--DVSITWGNRLYRTSPFVILSILYFFLFAWIL----LFAVSRFFLSCPAMLFHMLHK 78
           P      + +     R +    L+  +       L    LF   R     P    H L  
Sbjct: 27  PGNPHFQVQFHVTSCRFAFLAFLAGSFLAFSLHALISSNLFWRLRQLHHLPTA--HYLQT 84

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKM-----------HSYVSQQHTFHNEYLVYLLEV 127
           R+             ++ + +   A K             +Y   + T   E L  L   
Sbjct: 85  RDE-----------FAVYSVDELNAFKEFYDKSTADSVGATYTEAEETNIKEALSSLRLA 133

Query: 128 QIALAERQYNIAHEKLE-MMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISP 185
           Q      + + A    E  +   P   E  +    + E  +   + + Q Y   AL I+P
Sbjct: 134 QDMYMAGKDDKAARLFEHALALAPRHPEVLLRYGEFLEHNQRNIVLADQYYFQ-ALTINP 192

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                           +  +  +  L++++  + +  R  A+  I  +     +    A
Sbjct: 193 SHSEA-------LANRQRTADVVQTLDERRLASLDAKRA-ALSAIHEANSALRRAKKEA 243


>gi|194748531|ref|XP_001956698.1| GF24452 [Drosophila ananassae]
 gi|190623980|gb|EDV39504.1| GF24452 [Drosophila ananassae]
          Length = 1164

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 24/263 (9%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKI 334
               ++ E   E +E+ + +++I
Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI 421



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    + 
Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +Y  A   L+      I A I    A         + A+  LE                 
Sbjct: 433 AYGTASSILREKAKYEIPAEIQNNVASLHYRLGNLKMAKETLESA--------------- 477

Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    LK A    + + +  ES        ++++   M S D A       +K  P
Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528


>gi|295102481|emb|CBL00026.1| Protein kinase domain [Faecalibacterium prausnitzii L2-6]
          Length = 719

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 105/355 (29%), Gaps = 53/355 (14%)

Query: 42  FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIP 101
              +S++        +LF V R        +            Y AL             
Sbjct: 334 VAAVSLVLAVSGTLAILFGVQRI------GVERYA-------AYDALVR--------KGR 372

Query: 102 LARKMHSYVSQQHTFHNEYLVY--LLEV---QIALA--ERQYNIAHEKLEMMLQIP---- 150
            A     +   +        +Y   LE    Q  L   + +Y    + +E          
Sbjct: 373 TAADEMRFDEAEQDLQQAIAIYDDQLEAYVEQAVLLYRQGKYQECIDAVETTQSRELKYY 432

Query: 151 -ATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                  +Y++  E+   +    SA     KA+  SPD     +      +   ++S A 
Sbjct: 433 SRQSVANLYNVAAEAYYELESYESAATMYQKAIGYSPDILSYYQGEATALIQLGDYSGAD 492

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN---SIMASIC 265
             L +  K   +  ++ A  ++   L    +GD+  +   A +++   D       A   
Sbjct: 493 EVLAEMAKAVPDAEQSGAYQVVQSEL-LRKQGDLPDALDAARKAIGSADGNDQLARAYRL 551

Query: 266 AAKSLISQNKKRKAEVI---------LEKIWKVNPHPEIANIYTH-----LLSENTVGKL 311
           AA           +E I         L   +      ++A+ Y                L
Sbjct: 552 AASICEDIGDSMLSEEINLLNQGIEQLPDGYYNALAGQLASAYIRQAEATGNPGYQKDAL 611

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365
           +   +LE+    ++E  + ++ +  ++    +A        K  P    ++  LA
Sbjct: 612 RTYQQLEKNGNTTLEVRLNIAMLQYQLHDFSKAMEMLQALKKDYPKDYRVYKWLA 666


>gi|260893000|ref|YP_003239097.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
 gi|260865141|gb|ACX52247.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
          Length = 414

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 71/245 (28%), Gaps = 44/245 (17%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNS 172
            ++ +V          +  Y+ A +         +         +  L       G+ + 
Sbjct: 201 PDDPVVNFHLGVEYFRQGNYSRATQAFLRAAAGSSPAVVYGPKLLKYLVQSLYLAGEKDE 260

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAI-- 227
           A R AT  L + PD P++  A         +++ A     Q + +      +    A+  
Sbjct: 261 ALRAATNGLAVYPDHPYLHFARGVLLFEKGDYAAAQEAFLQARAHRQCPAYYAVEEAVTG 320

Query: 228 --LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              L        ++GD+  +    + +++     + A       L      R+       
Sbjct: 321 YQTLYYLGRCAEERGDLEEALAHYLAAVRENTEFVPAVARIVHIL----NPRE------- 369

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                              E+TV  L R   L         +  I+++I L  G+ + A 
Sbjct: 370 -----------------YPEDTVESLNRVFDLSA-----PRARRILAEIFLAEGAAELAR 407

Query: 346 AKAML 350
                
Sbjct: 408 RFLQA 412


>gi|262198980|ref|YP_003270189.1| hypothetical protein Hoch_5820 [Haliangium ochraceum DSM 14365]
 gi|262082327|gb|ACY18296.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 277

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 4/118 (3%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +    D  +A +   +ALD+  DA  +   + + +  +   + A     +          
Sbjct: 152 ALEEVDPEAAVKAYERALDLRRDAGEIWINLGRLHAESGRSTEAARCFREALAIEPA--- 208

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             A  L    +   D+G    +      +L++      A    A         R A  
Sbjct: 209 -DATALYNLGVVAQDEGRDGEAIELYRRALRIEPTLAEAHYNLATLFDRGGDTRAAIR 265



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 31/97 (31%), Gaps = 2/97 (2%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             D G   +  G +   +     A +               L  L    +A  E +   A
Sbjct: 172 RRDAGEIWINLGRLHAESGRSTEAARCFREALAIEPADATALYNL--GVVAQDEGRDGEA 229

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            E     L+I  T   A Y+L     R GD  +A R+
Sbjct: 230 IELYRRALRIEPTLAEAHYNLATLFDRGGDTRAAIRH 266



 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 6/126 (4%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIP 150
           +++   +   A K +           E  + L  L  +      +   A       L I 
Sbjct: 151 VALEEVDPEAAVKAYERALDLRRDAGEIWINLGRLHAE----SGRSTEAARCFREALAIE 206

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+Y+L   +   G    A     +AL I P        +   +    +   AI  
Sbjct: 207 PADATALYNLGVVAQDEGRDGEAIELYRRALRIEPTLAEAHYNLATLFDRGGDTRAAIRH 266

Query: 211 LNQKKK 216
           +N+ +K
Sbjct: 267 INEYRK 272


>gi|261856772|ref|YP_003264055.1| type IV pilus biogenesis/stability protein PilW [Halothiobacillus
           neapolitanus c2]
 gi|261837241|gb|ACX97008.1| type IV pilus biogenesis/stability protein PilW [Halothiobacillus
           neapolitanus c2]
          Length = 276

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 19/153 (12%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +  +  AH    +ML                  R+G+   A R   KA  +  +   +  
Sbjct: 90  DNDFAPAHHAYALMLD-----------------RLGEKEKAAREFEKAYSLDSNNSDLDN 132

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                    KE+++A +   +         +     L    +    +G    +      +
Sbjct: 133 NYGTFLCGQKEYTKAQSLFARA--YGDPLYKTPEFALTNSGVCYESEGKPDQAISQYDAA 190

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +        A I  A+   ++ K  +A   ++ 
Sbjct: 191 IVKQPGYGPALIGKARVYYAEKKYAEAANAMKA 223



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +    N+  A +     +   ++G M  +     +++   ++   A    A  L    
Sbjct: 49  LSSNPTDNQRAAQINTQLGVGYMNEGHMDVAVEKIKKAIYYDNDFAPAHHAYALMLDRLG 108

Query: 275 KKRKAEVILEKIW 287
           +K KA    EK +
Sbjct: 109 EKEKAAREFEKAY 121


>gi|167579766|ref|ZP_02372640.1| TPR domain protein [Burkholderia thailandensis TXDOH]
          Length = 573

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 9/246 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180
            +L  ++AL       A++    + +       A  +  +   +    D  +A     + 
Sbjct: 47  QVLAAEVALQRNLPAPAYQTYLALARDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 105

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              SPD+    +      VL  + + A   L Q+   A   NR +AI+ +   L  A   
Sbjct: 106 --YSPDSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDNRGQAIIALQALL--ARGP 161

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           + +       + LK   N   A +  A+  ++ + K  A   L++  ++ P    A +  
Sbjct: 162 NRVGGLTVLQDLLKNDMNRPEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 221

Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +        +    +  + N +S +  + ++++ L    +D A  +   AM+     +
Sbjct: 222 SQMGPGERAAGIASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQF-DAMRRNDSSD 280

Query: 360 IFLLLA 365
              L+A
Sbjct: 281 PTPLMA 286



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 78/242 (32%), Gaps = 43/242 (17%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q+ LA+ + + A ++ + M +  ++    + ++     +   L+ A  Y  + + 
Sbjct: 250 RLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVK 309

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++                             +KK   +  +    L    +    D+ + 
Sbjct: 310 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNNE 336

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEI 295
             +     +  +     + A +  A+ L  Q K  +A  +L  +   +PH        + 
Sbjct: 337 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQASDPHDAAVIARTDA 396

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + ++     +    +L +A    E   +  +     +    ++G       +  L M+  
Sbjct: 397 SILFASKRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQFTTMEQQLRLLMRAQ 453

Query: 356 PR 357
           P 
Sbjct: 454 PD 455


>gi|187734887|ref|YP_001876999.1| cytochrome C family protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187424939|gb|ACD04218.1| cytochrome C family protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 767

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 5/168 (2%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
            +  H          L  QIA++ +    A       L+  AT               G 
Sbjct: 574 AAALHQADQPSGAMKL-AQIAISRKDVKTAELWFSKALKWDATSSVVHRDYAVFLASQGR 632

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     +A+ ++P    +   +    +   + S A+   N+  K    + R     L
Sbjct: 633 SREAVDQMQEAVRLAPRDANLWYLLGLGQIENNDESGALESFNEALKIEPSFIR----AL 688

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             R+L N   G +  +  D      L   +       A  L    + R
Sbjct: 689 FNRALLNEKVGRLEQALQDLENCSSLEKGNADIPFTLAVMLYRNGRYR 736


>gi|114777709|ref|ZP_01452669.1| TPR domain protein [Mariprofundus ferrooxydans PV-1]
 gi|114551925|gb|EAU54459.1| TPR domain protein [Mariprofundus ferrooxydans PV-1]
          Length = 579

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 80/235 (34%), Gaps = 7/235 (2%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G+   A +  T  +   P+A      ++   + +     A   + +   N      
Sbjct: 60  AAREGNRELALQLLTALIAKQPNAITPHMQLIDLLMESGRIDEAEQHIARMLSNKALPAE 119

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            R  L +A+            +       L+       A    A  L    +  +A   +
Sbjct: 120 QREQLQLAQYRIYIAHDQPQLALEKLNTFLQKHPAHDTARTMQASILAGLGRMDEALASI 179

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRAL----RLEEINKESVESLVIVSKIALEMG 339
           +    +  H                G LKRA     R++ +  ++  +++++S +A +M 
Sbjct: 180 KLG--IKQHESAGLRMLQARLLIKRGDLKRAKASLLRVQHLMPDNDAAVLMLSALAAQMK 237

Query: 340 SIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
             +QA       +   P    +   LA++  A +   + I+ +  +A HA   P+
Sbjct: 238 DHEQAEKLLRDFLANHPQDIRVSHALAKLLVAQARLPEAIIVYRNAAKHAGDSPV 292



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 85/264 (32%), Gaps = 14/264 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A K      Q     N+  V +L    A   + +  A + L   L          
Sbjct: 203 GDLKRA-KASLLRVQHLMPDNDAAVLMLSALAAQM-KDHEQAEKLLRDFLANHPQDIRVS 260

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           ++L         L  A      A   + D+P V   +   Y   K++ +A+       K 
Sbjct: 261 HALAKLLVAQARLPEAIIVYRNAAKHAGDSPVVLRPLGMLYFQDKDYEQAVQTFRTLVKL 320

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             + +    +     +++  D+   I  Y     + K+      A I  A   + +NK  
Sbjct: 321 QPDDSNRFYLAASLEAMDKLDEAKSI--YTKITHASKM---YTQAQIRLAAMDLQENKLS 375

Query: 278 KA-EVIL----EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           KA   +L    EK  +++ H  +      L S+     L     L  + K   + L   +
Sbjct: 376 KAKARMLAILHEKPQQLDAH--LLLSTIRLNSKEYKQVLDETEPLLRLKKLPPQLLFNRA 433

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
                  + DQ        ++ +P
Sbjct: 434 VAFEHFKNYDQVETTLNRVLEHSP 457



 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 14/228 (6%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLN--SAQRYATK 179
           L  Q A  E    +A + L  ++       T    +  L  ES RI +     A+  + K
Sbjct: 55  LAAQKAAREGNRELALQLLTALIAKQPNAITPHMQLIDLLMESGRIDEAEQHIARMLSNK 114

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL        +  A  + Y+   +   A+  LN   +     +  R +     +      
Sbjct: 115 ALPAE-QREQLQLAQYRIYIAHDQPQLALEKLNTFLQKHPAHDTARTMQASILA-GLGRM 172

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            + +AS    I+  +      M     A+ LI +   ++A+  L ++  + P  + A + 
Sbjct: 173 DEALASIKLGIKQHESA-GLRM---LQARLLIKRGDLKRAKASLLRVQHLMPDNDAAVLM 228

Query: 300 THLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              L+   ++     K        + + +     ++K+ +    + +A
Sbjct: 229 LSALAAQMKDHEQAEKLLRDFLANHPQDIRVSHALAKLLVAQARLPEA 276


>gi|94971303|ref|YP_593351.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553353|gb|ABF43277.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 468

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 33/102 (32%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
             +  + AL +   + A    +  L+  +     + +      R G    A   A +A+ 
Sbjct: 124 NFMAGRFALEQGDRDAAARYFDRALRFKSDDANVLINYAAVLVRTGRPQEALPLAERAVR 183

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +PD+P     +    + A     AI    +  K   +    
Sbjct: 184 AAPDSPDAWAVLGYANLQADRSKDAIPAFEKSLKLRPDPTVE 225



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              +   A  + ++  +    +  + A +LI  +      G    +   A  +++   +S
Sbjct: 133 EQGDRDAAARYFDRALR----FKSDDANVLINYAAVLVRTGRPQEALPLAERAVRAAPDS 188

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
             A      + +  ++ + A    EK  K+ P P +         E T  
Sbjct: 189 PDAWAVLGYANLQADRSKDAIPAFEKSLKLRPDPTVEAFLKRAHKETTTE 238


>gi|302337075|ref|YP_003802281.1| RelA/SpoT domain protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634260|gb|ADK79687.1| RelA/SpoT domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 398

 Score = 43.4 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 32/164 (19%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           + ++S A+  L  K          R I L+ R +      D   +  D + +        
Sbjct: 257 SGDYSGAV-VLYGKILAGSLSKEIRVITLMHRGMARFADADYAGAEEDFLAA-------- 307

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
                    L S+  + KA            H  +  +Y   ++      L       E+
Sbjct: 308 ---------LSSEGHRGKA------------HYYLGILYR--VTGRPGQALNAFSAALEV 344

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           N    ESL+  ++   ++G  ++A +    A+++ P  E  L+L
Sbjct: 345 NPYHFESLLGSARALYDLGDTEEALSYCNNALRLMPDDEAALVL 388


>gi|172059230|ref|YP_001806882.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
 gi|171991747|gb|ACB62666.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MC40-6]
          Length = 828

 Score = 43.4 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 86/277 (31%), Gaps = 18/277 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL   L    A     A+ ++  +           ++ L +     ++           
Sbjct: 6   QALQEALAHHQAGRFAQAKTLYDAILHAQ-PGQPDAMHFLGLLACQLKQYDAGLALMERS 64

Query: 146 MLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           + + P       + ++  E  R+ D   A  +  +A+ + PD P     +      A++ 
Sbjct: 65  LAERPDASYFNNLGNMLRECGRLDD---AIAHYRRAVALRPDYPEAHNNLGNALRDARDP 121

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A+   ++  +    +    A           D G++ A+     +++        A  
Sbjct: 122 AEAMQSCSRAIELRPGY----AEAYNNLGNVLQDLGELDAAAASYGKAISFHPAYAEAHS 177

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319
                L +Q +   A V   +  ++NP     H  +A         +   +  R      
Sbjct: 178 NLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEHAR----AG 233

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  +  E    + +    M   D A      A +I P
Sbjct: 234 LEPDDAEGHCTLGRSLRSMNDFDGAARLFERACEIDP 270



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 21/275 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
             +  A   +      H  + E    L  +L  Q      ++  A       +++     
Sbjct: 153 GELDAAAASYGKAISFHPAYAEAHSNLGNVLRAQ-----ERHADAIVHYRRAIELNPALR 207

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A   L        D + A  +A     + PD       + +      ++  A     + 
Sbjct: 208 VAHRGLAIALRATDDFDGALEHAR--AGLEPDDAEGHCTLGRSLRSMNDFDGAARLFERA 265

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +    +    A            +G+   S      +++L      A      +  + +
Sbjct: 266 CEIDPGY----APAWCRLGELRCQQGEYEESLRLCRHAIELDPELADAYNFLGLAYHNLD 321

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           +   +E+       +NP     H  +A     L   +      R  +  E+  + V+  +
Sbjct: 322 RMAASELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSEYRIAQ--ELGVDPVKIQL 379

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            +  I         A A    A++  P +    LL
Sbjct: 380 TLGDILWAKRDFAGAVAAFREAVEHDPHRAYARLL 414


>gi|33864230|ref|NP_895790.1| TPR repeat-containing glycosyl transferase [Prochlorococcus marinus
           str. MIT 9313]
 gi|33635814|emb|CAE22139.1| Glycosyl transferase, family 2:TPR repeat [Prochlorococcus marinus
           str. MIT 9313]
          Length = 427

 Score = 43.4 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 71/195 (36%), Gaps = 19/195 (9%)

Query: 174 QRYATKA-LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAI 227
            R A +A L   P  P+    +    V   +  R I  L Q  K     NA    R   +
Sbjct: 210 LRTAMEAWLAEHPGDPYTCAKLGALEVDEGQKERGIQLLRQGLKQNENTNANPIERYELL 269

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDN---SIMASICAAKSLISQNKKRKAEVILE 284
           L +  +L    + D   +     E++ L  +   S+ A +  A  L+ Q +  +A  +  
Sbjct: 270 LHLGIAL---AQDDPQGAVTAYREAVALPMDIRVSLGARLNLAALLMQQEQLDEAIALTT 326

Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                   PE+A  + +L        N V  L    + +++N E  E+    +   L  G
Sbjct: 327 TA--TQQAPEVALAWYNLGLMQRRQGNLVEALYAYEQAKQLNPEHAETHQNHAVAMLVAG 384

Query: 340 SIDQAHAKAMLAMKI 354
            I+ A      A+ +
Sbjct: 385 DINGARNSFNKAITL 399



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 55/182 (30%), Gaps = 22/182 (12%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
            +   ++G + L  GL            K +   +       E    LL + IALA+   
Sbjct: 237 DEGQKERGIQLLRQGL------------KQNENTNANPIERYE---LLLHLGIALAQDDP 281

Query: 137 NIAHEKLEMMLQIP-ATRE-FAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             A       + +P   R       +L     +   L+ A    T A   +P+       
Sbjct: 282 QGAVTAYREAVALPMDIRVSLGARLNLAALLMQQEQLDEAIALTTTATQQAPEVALAWYN 341

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +            A+    Q K+   E     A      ++     GD+  + +   +++
Sbjct: 342 LGLMQRRQGNLVEALYAYEQAKQLNPE----HAETHQNHAVAMLVAGDINGARNSFNKAI 397

Query: 254 KL 255
            L
Sbjct: 398 TL 399


>gi|15668984|ref|NP_247788.1| hypothetical protein MJ_0798 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2833599|sp|Q58208|Y798_METJA RecName: Full=TPR repeat-containing protein MJ0798
 gi|1499620|gb|AAB98793.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 334

 Score = 43.4 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 8/154 (5%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           + ++A +  E   +       A++ L      + D  ++ +Y  K L+++P+     E +
Sbjct: 150 KRDLAIKYFEKASEKDRNNYKALFGLGKSYYLMSDNKNSIKYFEKVLELNPNDVEALEYL 209

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            + Y   ++  +AI +  +  +   +       L++  +           +     ++LK
Sbjct: 210 GELY-YEEDCEKAINYFKKALELKPD----DIDLILKVAFTYFKLKKYKHALKYFEKALK 264

Query: 255 LCDN---SIMASICAAKSLISQNKKRKAEVILEK 285
           L  N            +  I   +  KA    EK
Sbjct: 265 LNPNVFELEQIYESMGRIYIYLGEDEKAIECFEK 298


>gi|330815900|ref|YP_004359605.1| TPR repeat protein [Burkholderia gladioli BSR3]
 gi|327368293|gb|AEA59649.1| TPR repeat protein [Burkholderia gladioli BSR3]
          Length = 390

 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 60/153 (39%), Gaps = 6/153 (3%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+    +  D       
Sbjct: 84  GETDRAIRVHQNLLNRDDLPVNERDHALYELGQDFLKAGLLDRAEESFHRLADGDYALG- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W+++I    + +  +    +   A      + E   + D  A+   
Sbjct: 143 AQRALLTIYGIEKDWNKSIQTARRIETMSGSSLSTEIAQFHCELAGEALARKDGAAAAQQ 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             E+L +  +++ A+I + ++  +    + A  
Sbjct: 203 LREALAVNPHNVRATILSGEAAEAAGDHQAAIA 235


>gi|288941999|ref|YP_003444239.1| tetratricopeptide repeat-containing protein [Allochromatium vinosum
           DSM 180]
 gi|288897371|gb|ADC63207.1| tetratricopeptide repeat protein [Allochromatium vinosum DSM 180]
          Length = 395

 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 83/264 (31%), Gaps = 8/264 (3%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++     P  R FA++ L  +    G L+ A+    + + +      
Sbjct: 82  GEVDRAIRLHQNLIERRHLGPELRGFALFELGQDYMSAGLLDRAETLFEELVGLGLHGQR 141

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             +A+ + Y   ++WSR +    Q +    +      A      + E   + D   +   
Sbjct: 142 ALQALREIYQRERDWSRCLEVAAQLEALTGQRLTVEIAHYHCELAEEARRRQDPAGAREQ 201

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306
              +  +  + + A+I     ++ ++    A  + +++ +      PEI       +   
Sbjct: 202 LSRARDIQSDCVRATILEGFMVLEEDDVAGAAALFKRVAERGATYVPEILPALIESMERL 261

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               + +   L          ++ + +   +    + A       +       +      
Sbjct: 262 GENVIAQLEALAANRAG-PHLMLALGERVEQAHGSEAALDLLADYLARWADLAVLERFLD 320

Query: 367 IEQANSHNTDKILYWTQSALHAMP 390
           +    S    +   + + AL    
Sbjct: 321 LRARESDPDGRAHRYARVALGVAR 344


>gi|168702109|ref|ZP_02734386.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
          Length = 489

 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 69/226 (30%), Gaps = 42/226 (18%)

Query: 144 EMMLQIPA-TREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             +   P  T    +  + + E    G+L+ A     + + + PD      +        
Sbjct: 182 RELKADPENTHALYMRGIGWREK---GELDKALNDFNECIRLEPDFTSAYLSRGNVLSDR 238

Query: 202 KEWSRAI---------------------------TFLNQKKKNAKEWNR---NRAILLIA 231
           +++++AI                              ++  K+  E  R         + 
Sbjct: 239 RQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESIRLNPRYVPAHLT 298

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           R      KG+   +  +  E+L+L    I   +    +  ++ +  KA        +++P
Sbjct: 299 RGKAWYGKGEHDKAIANYTEALRLDPRYISPYLHRGLAWAAKGEHDKAIADYSAAVRLDP 358

Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                H ++A  +           L+    L E+N     +   ++
Sbjct: 359 KSIYAHQQLAAGWAAKKEYKNA--LRGFETLAELNPRHAYAFHQIA 402



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 7/156 (4%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A    +++ K   E        L  R +   +KG++  + +D  E ++L  +   A +
Sbjct: 174 DEAPAHWDRELKADPE----NTHALYMRGIGWREKGELDKALNDFNECIRLEPDFTSAYL 229

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEIN 321
                L  + +  KA     ++ + +P   +A         +T    K    L     +N
Sbjct: 230 SRGNVLSDRRQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESIRLN 289

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              V + +   K     G  D+A A    A+++ PR
Sbjct: 290 PRYVPAHLTRGKAWYGKGEHDKAIANYTEALRLDPR 325


>gi|170030859|ref|XP_001843305.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus]
 gi|167868424|gb|EDS31807.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus]
          Length = 1231

 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 61/200 (30%), Gaps = 11/200 (5%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D   A++   K + ++P        +   Y    EW      L          + + A  
Sbjct: 450 DTARARKCLEKCISLNPAQKEAIILLSSLYRTLGEWDANSKLLQSSVALGATGSGS-AWA 508

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            +   L +  +     +       ++    +I A    A + + +     A  + EK  +
Sbjct: 509 HLQLGLHHLGQQKHDEAIAAFRTVIRYDVANITAWEGLADAYMGRGSYSSAAKVFEKTAE 568

Query: 289 VNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA-------LEM 338
           + P   +P++       +       +     L   N++   ++  +++         L  
Sbjct: 569 LKPDNLYPKLQLANIKNILRQHRDAVALFEELLSTNEKYFPAVKGIAESYAGLCYYRLGQ 628

Query: 339 GSIDQAHAKAMLAMKIAPRK 358
             + +A   A  A+    R 
Sbjct: 629 RLVGKARDHAQSAVDYVTRA 648


>gi|145596855|ref|YP_001161152.1| adenylyl cyclase class-3/4/guanylyl cyclase [Salinispora tropica
            CNB-440]
 gi|145306192|gb|ABP56774.1| adenylyl cyclase class-3/4/guanylyl cyclase [Salinispora tropica
            CNB-440]
          Length = 1190

 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 18/192 (9%)

Query: 83   KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNEYLVYL---LEVQIALAERQYNI 138
            +G+  +  G+++        A  + +          +  L  +   L   +AL    +++
Sbjct: 976  RGFALVVRGVIARGLGEPEHAADLLADAMGYARRTSHPLLTGMAGTLRGFVALDSGDHDL 1035

Query: 139  AHEKLEMMLQIPA-------TREFAVYSLYFESCRIGDLNSAQRY---ATKALDISPDAP 188
            A  +   +L            +      L       GD   A         A   +P   
Sbjct: 1036 AEREARAVLTAVEPHNPWAPAQVAPRVLLATARLAAGDPAVAVGLLAPVATAAQTTPALL 1095

Query: 189  WVTEAVVQQYV----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 V+ QY        +  +A+ +  + +    E  R++ +         A  GD  A
Sbjct: 1096 ISRRLVMAQYASALLAHGQTEQALDWAQRARTVPAEDVRSQVLAAAVLGKALAATGDSTA 1155

Query: 245  SYHDAIESLKLC 256
            +   A E+++L 
Sbjct: 1156 ARASAQEAVRLA 1167


>gi|77460482|ref|YP_349989.1| response regulator receiver domain-containing protein [Pseudomonas
           fluorescens Pf0-1]
 gi|77384485|gb|ABA75998.1| Response regulator receiver domain protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 534

 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 6/133 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYA 177
            L             Q        + ++           +  L F   + G ++ A+   
Sbjct: 165 PLCLRYRADALRDMNQNEALERLYDSIIADRPLPWAFAGLGKLLF---KRGQVSQAKGVY 221

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            KAL + P  P + + +    V   +   A   L +  + +    R +A LL   ++ N 
Sbjct: 222 EKALKVFPMMPALYDGMADVLVAEGDTKGAQQVLEEAIRLSPLAVRRQA-LLGKLAMANE 280

Query: 238 DKGDMIASYHDAI 250
           D      +Y  A+
Sbjct: 281 DFDTASRAYRQAV 293



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 42/211 (19%)

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            PW    + +      + S+A     +  K           L    +     +GD   + 
Sbjct: 197 LPWAFAGLGKLLFKRGQVSQAKGVYEKALKVFP----MMPALYDGMADVLVAEGDTKGAQ 252

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               E+++L          A +      K   A    +           +  Y   +++ 
Sbjct: 253 QVLEEAIRLSP-------LAVRRQALLGKLAMANEDFDTA---------SRAYRQAVNQG 296

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSID--QAHAKAM------LAMKIAPRK 358
              + K             ES + ++   +  GS        +           K  P  
Sbjct: 297 AQSRFK-----------DPESNLGLAHALISKGSERGLDTRTRLEINTTLSAVAKENPTD 345

Query: 359 EIFLLLAQIEQANS---HNTDKILYWTQSAL 386
               + A++ +A S   ++ +     T+ AL
Sbjct: 346 PGLQIRARLMKATSLLLNDAETAEKLTEQAL 376


>gi|71275394|ref|ZP_00651680.1| HemY, N-terminal [Xylella fastidiosa Dixon]
 gi|71898566|ref|ZP_00680737.1| HemY, N-terminal [Xylella fastidiosa Ann-1]
 gi|170730369|ref|YP_001775802.1| porphyrin biosynthesis protein [Xylella fastidiosa M12]
 gi|71163694|gb|EAO13410.1| HemY, N-terminal [Xylella fastidiosa Dixon]
 gi|71731690|gb|EAO33750.1| HemY, N-terminal [Xylella fastidiosa Ann-1]
 gi|167965162|gb|ACA12172.1| porphyrin biosynthesis protein [Xylella fastidiosa M12]
          Length = 391

 Score = 43.4 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 125/367 (34%), Gaps = 17/367 (4%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56
           +  L  +FF++ L I S   +   P     DV I  G   Y T+      +L   +    
Sbjct: 4   LRNLALWFFLLILGIFSAQWLLQQPNRDFGDVVIRIGGNDYITTVPQATILLLIIVLLLW 63

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116
            L ++    +        +  +  Y +G+  L  GL ++      LA ++    S+    
Sbjct: 64  SLRSLLVLPI-------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDEDT 116

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
               +     +++A     ++ A+     + +   T    + S    + +  +       
Sbjct: 117 EVSAIALTTAIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLD 176

Query: 177 ATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           A +   + P         ++Q     + +S   T   Q+  +  E+ R     +     +
Sbjct: 177 ALETHPLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFENETIENVLRQ 236

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHPE 294
             D   +   +    ++LK   N +      A  L  +N    + E  LE+ W  N    
Sbjct: 237 AKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN---- 292

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  +Y  L  +    +  RA     ++ +S   L+ + ++AL+     QA      A+  
Sbjct: 293 LIRLYGFLPLKEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALQRQQYSQAETFLRRAIDK 352

Query: 355 APRKEIF 361
               E +
Sbjct: 353 ETSAETW 359


>gi|332974772|gb|EGK11688.1| hypothetical protein HMPREF9374_1932 [Desmospora sp. 8437]
          Length = 655

 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 103/314 (32%), Gaps = 62/314 (19%)

Query: 84  GYKALYTGLMS----IAAH-----NIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALA 132
           G  A+  GL++    + +      +   A + +    +       +E +        A  
Sbjct: 326 GIGAVVIGLVAGVYLLFSGGLWGDDAEDAARYYGESVRLFREKQMDEAITR------AQL 379

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             + + A ++              + +L+ E     D   A +   + +   PD P V +
Sbjct: 380 AVEADPAEKEY----------LLHLANLHAEKK---DYKKATQVLAEGVKNVPD-PGVYD 425

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+    + + +  +A + + +   +    +R   +        +  KGD  A+      +
Sbjct: 426 ALAMYALDSGDLKQAESAVQKALSS----DRENPLFHYHEGKIHGAKGDDEAAVRSFRTA 481

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------------- 299
           ++L           A  L+   K  +A    ++  K+   P+ A ++             
Sbjct: 482 VRLNPKEGSYHYILASYLLKLKKTEEAVKHGQEAAKLK--PDNATVWYKLGQAHLAERER 539

Query: 300 ------------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                         L+++      +   ++ ++  E   +   +S      G  + +   
Sbjct: 540 IAKKTGLKKKERESLMADTVKEATQAFNQVIKLKPEHAATHYYLSIARYYAGDFEASLKS 599

Query: 348 AMLAMKIAPRKEIF 361
           A  +++I+P+  ++
Sbjct: 600 ARESVRISPKTAVY 613


>gi|332212286|ref|XP_003255250.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 1 [Nomascus leucogenys]
          Length = 479

 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 17/144 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSHTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262
                +    +   A+ ++  +  KG       + ++            +++      +A
Sbjct: 283 TSVLLHHQIGLCYRAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAEVILEKI 286
            +  A+  I     RKAE   +K+
Sbjct: 343 HLDLARMYIEAGNHRKAEETFQKV 366



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 24/149 (16%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +L+  D+G          E+L    +       AAK    +    KA  +L+K  +  P
Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSHTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282

Query: 292 -----HPEIANIYT--------------HLLSENTVGKLKR-----ALRLEEINKESVES 327
                H +I   Y                  +   + K+ R          E       +
Sbjct: 283 TSVLLHHQIGLCYRAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + ++++ +E G+  +A       + + P
Sbjct: 343 HLDLARMYIEAGNHRKAEETFQKVLCMKP 371


>gi|301058856|ref|ZP_07199841.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300447068|gb|EFK10848.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 763

 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 21/227 (9%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R  D+  +A Y GL          A   ++  + Q       L  L     A   +  
Sbjct: 555 RLRRDDR--EAFYRGL-----DEFRRAMLYNADFAAQRYN----LGNL----AANLGKDR 599

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A E  +  + I      A  +L     R G+   ++R   +A+   P+   V  ++  
Sbjct: 600 E-AIEYYQKAIAIDDQFYPAKVNLAMLYNRQGNNKESERLLREAVAQHPELYEVAYSLGL 658

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                K++  A  FL +      ++ R    +           G    +      +L L 
Sbjct: 659 LLAEMKQYEDAGVFLAKAAAGMPDYGR----VHYNHGQLLLILGQPKKAQVALETALALE 714

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302
             +    +  A   +   +  +A  + E   +  P H     +  H+
Sbjct: 715 PQNQEFFVALADCYLRSRQPDRARSLAEDTIRRFPGHRAANELLRHI 761



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 57/168 (33%), Gaps = 18/168 (10%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +    +      ++   R  L    +    + G    +     +++ + D    A +  A
Sbjct: 568 LDEFRRAMLYNADFAAQRYNLGNLAA----NLGKDREAIEYYQKAIAIDDQFYPAKVNLA 623

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLS-ENTVGKLKRALRLEE 319
                Q   +++E +L +   V  HPE       +  +   +   E+    L +A     
Sbjct: 624 MLYNRQGNNKESERLLREA--VAQHPELYEVAYSLGLLLAEMKQYEDAGVFLAKA---AA 678

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQ 366
              +         ++ L +G   +A      A+ + P+ +E F+ LA 
Sbjct: 679 GMPDYGRVHYNHGQLLLILGQPKKAQVALETALALEPQNQEFFVALAD 726


>gi|149631897|ref|XP_001506546.1| PREDICTED: similar to KIAA0155 isoform 1 [Ornithorhynchus anatinus]
          Length = 1163

 Score = 43.4 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 104/306 (33%), Gaps = 43/306 (14%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517

Query: 141 EKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
           +  +  + + P   +  +  L   +   G+   A  +  +AL I+ D P     +   ++
Sbjct: 518 KLYKNILREHPNYVDCYLR-LGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHL 576

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHD 248
             +EW        +  K     N   ++L +            R  E  +K     +   
Sbjct: 577 AKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAI 635

Query: 249 AIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANI 298
             + L+    N   A    ++ A K    + +      R+A   +  +W       +A+I
Sbjct: 636 YKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHI 690

Query: 299 YTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           Y       +  ++      +  +   ++ E ++ +++   + G + +     + A  +AP
Sbjct: 691 YVEQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAP 748

Query: 357 RKEIFL 362
              + +
Sbjct: 749 SDTVLM 754


>gi|325926223|ref|ZP_08187581.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118]
 gi|325543405|gb|EGD14830.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118]
          Length = 883

 Score = 43.4 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            AK  +R RA L   R L+   +     +     E+LKL  +  +A+         Q + 
Sbjct: 760 AAKSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQGRF 819

Query: 277 RKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLE 318
            ++   LE   K++P   +A     + Y     +    +   A  LE
Sbjct: 820 AESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKARKAYATYLE 865


>gi|316970705|gb|EFV54592.1| putative tetratricopeptide protein [Trichinella spiralis]
          Length = 692

 Score = 43.4 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 76/246 (30%), Gaps = 60/246 (24%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA- 187
               ++++ +A + LE  L++     +    L  E   + D + A  Y  +AL + P   
Sbjct: 454 ACSLKKRHELAIQCLERALELDKHYFYGHILLGHEWSALDDTDQADHYFKEALRLRPRHH 513

Query: 188 -PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            PW +   V                        +     A LL + SL        + S 
Sbjct: 514 SPWFSLGYVAFRSQ-------------------DMENAEAYLLRSLSLNPKSPSIQLISL 554

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
              +E+                    + +KR A  IL    K+ P              N
Sbjct: 555 LKVLEA--------------------RGRKRMAGQILNYTLKIAP-------------NN 581

Query: 307 TVGKLKRALR------LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           T  +  RA+       L+ I         ++ ++  EM     A      A+ + P  E 
Sbjct: 582 TFCRFTRAMAQKELMDLKRIIPSEPIVYFLLGRVYKEMNEPHSAMVNFAHAVTLDPNLEQ 641

Query: 361 FLLLAQ 366
             ++AQ
Sbjct: 642 LQVMAQ 647


>gi|315123310|ref|YP_004065316.1| putative protein-tyrosine sulfotransferase [Pseudoalteromonas sp.
           SM9913]
 gi|315017070|gb|ADT70407.1| putative protein-tyrosine sulfotransferase [Pseudoalteromonas sp.
           SM9913]
          Length = 480

 Score = 43.4 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 6/157 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L +    L++ +   A    +M+LQ       A++ L   + R+   ++A     +A  
Sbjct: 2   LLKKADQLLSQNKLREAEFHYKMLLQAEPDNGDALFGLGKVALRLEQFDAAVYILQRACQ 61

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             P A     A+   +        A   L      A +            +      G++
Sbjct: 62  HLPYALEPLYALSDAFNAVNSPEDAQKVLEYATSIAADNPD----THYYLAQHYLTFGEL 117

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             ++    E+LKL       +      L+   +  KA
Sbjct: 118 DKAHATFEEALKL--GIAPVTAYVLFELVQLGRFNKA 152


>gi|297692556|ref|XP_002823611.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like
           [Pongo abelii]
          Length = 914

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 688 EIWMKKAIKLQAD 700


>gi|260829076|ref|XP_002609488.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae]
 gi|229294845|gb|EEN65498.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae]
          Length = 816

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 14/204 (6%)

Query: 196 QQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           +       +  AI   L   ++    +       ++  SL       +  +     +SL 
Sbjct: 598 RLQHDQGRYVEAIETYLEAIRRRPSHYAPQSLYNMLGESL--FKNSQLAEAEEWFKKSLA 655

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTH-LLSENTV 308
              + + A +  AK +   N+  +AE++ +K  +        H            SE   
Sbjct: 656 AKPDHVPAHLTYAKLMAKTNRAAEAELMYQKAMELDSNSATVHQHYGQYMAETGRSEEAA 715

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
             + +A    E+     E++   +    + G  + A      A ++ P      + L  I
Sbjct: 716 DMMVKA---VELGSPEFETIFNAANALRQAGRHEDAEKYYKQATQLKPEVASAHMNLGAI 772

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
              N    +    +   AL   PD
Sbjct: 773 LHLNGKYVEAETSYL-RALELKPD 795


>gi|220908955|ref|YP_002484266.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219865566|gb|ACL45905.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 463

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 46/174 (26%), Gaps = 16/174 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIAL--AERQYNIAHEKLEM-----MLQIP 150
           N  LA   +             L  L L  Q  L   +     A +  +         + 
Sbjct: 282 NYQLAEDYYHQAEVAVEGRTAPLTSLILAGQARLQNLQGDRARAEQYWQQAEILLQASLS 341

Query: 151 ATREFAVYSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            ++      L       G   D   A       + +  DA  +    +       EWS A
Sbjct: 342 GSKFGHRRELAQLLLERGHPADQRQAVALMQAEVQLRQDAQTLGTLALAL-SRVGEWSAA 400

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              + +  ++        A+LL    +     G  + +     ++ ++      
Sbjct: 401 RQAIQKALRSGI----QDAVLLHRAGVIATALGHPVEAEQYFHQARRIDPTFDP 450


>gi|194380400|dbj|BAG63967.1| unnamed protein product [Homo sapiens]
          Length = 914

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 688 EIWMKKAIKLQAD 700


>gi|158337862|ref|YP_001519038.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158308103|gb|ABW29720.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 643

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 74/228 (32%), Gaps = 18/228 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE-------------KL 143
           A N  +   +               + +   ++ L   Q   A +               
Sbjct: 412 AGNGQVEEALTVLRPVVQDSPENPFIRMTLGKVLLQAGQKQEARQLLQTGLKKVSFPLAF 471

Query: 144 EMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
             +   P  +   V   LYFE  +    + A  +  KA+ I PD      AV        
Sbjct: 472 VGIETTPNAKLETVLGQLYFELKQ---YDLALAHYQKAVQIDPDFAVGHFAVGNILRRQG 528

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +  +AI    +  K               R L    +G   A+  D   + +L   ++ A
Sbjct: 529 KSDQAIPAYEKALKLQPRNLFFTHQFYSGRGLALLAQGKEAAAIADFERATQLNAINVEA 588

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309
                K+L+ QNK   A   LE  + +NP +P++A       S+ +V 
Sbjct: 589 LHGLGKALLQQNKPSAAIPHLEAAYDLNPGYPQVAEDLRLAKSQTSVE 636


>gi|158261895|dbj|BAF83125.1| unnamed protein product [Homo sapiens]
          Length = 899

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 688 EIWMKKAIKLQAD 700


>gi|114646136|ref|XP_522486.2| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Pan
           troglodytes]
          Length = 914

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 688 EIWMKKAIKLQAD 700


>gi|22760766|dbj|BAC11325.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 452 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 511

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 512 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 570

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 571 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 627

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 628 EIWMKKAIKLQAD 640


>gi|473901|gb|AAA25160.1| ORF1 [Lactococcus lactis]
          Length = 349

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 20/188 (10%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATREFAVYSLYFES 164
           S + +     +  L+     +    +  Y+ A  +   + +      T+     S+Y   
Sbjct: 52  SKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETK----ISIY--- 104

Query: 165 CRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKKKNA 218
            RIGD  +       A   L+ S +     E + +    Y      +RAI    + +K  
Sbjct: 105 QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMD 164

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E+        +A +       +  A+   A + +K   N++     A+K       K  
Sbjct: 165 VEFLNYE----LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAA 220

Query: 279 AEVILEKI 286
           AE  L   
Sbjct: 221 AERYLVDA 228


>gi|51476220|emb|CAH18100.1| hypothetical protein [Homo sapiens]
          Length = 914

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 688 EIWMKKAIKLQAD 700


>gi|224809432|ref|NP_861448.2| transmembrane and TPR repeat-containing protein 3 [Homo sapiens]
 gi|46798873|emb|CAG26973.1| SMILE protein [Homo sapiens]
 gi|109658812|gb|AAI17178.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo
           sapiens]
 gi|109658968|gb|AAI17176.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo
           sapiens]
 gi|119617821|gb|EAW97415.1| transmembrane and tetratricopeptide repeat containing 3 [Homo
           sapiens]
 gi|313883880|gb|ADR83426.1| transmembrane and tetratricopeptide repeat containing 3 [synthetic
           construct]
          Length = 914

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 688 EIWMKKAIKLQAD 700


>gi|326680234|ref|XP_001922486.3| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
           repeat-containing protein 3 [Danio rerio]
          Length = 934

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 85/234 (36%), Gaps = 15/234 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--T 191
            + + A +     L++  T     Y+L   +  + D + A R   +ALD++P        
Sbjct: 579 NKPSEAKDAYLRALELDHTNADLWYNLAIVNIEMKDPSEALRNFNRALDLNPRHKLALFN 638

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A++ Q       ++     N++     +   + A       +   D  +   + H   E
Sbjct: 639 SALLMQESGE---AKLRPEANRRFLTYVKEEPDDANGYFNLGMLAMDANENEEAEHWMRE 695

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE------ 305
           ++ L      A    A       ++  A  +LE++ +   HPE       L  +      
Sbjct: 696 AIHLQPGFRSALFNLALLYSQSQRELDALPVLEELLRY--HPEHVKG-LILKGDILMNHR 752

Query: 306 -NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            +T G      R+  ++  +V++   +  +  E   + +A    +  + +AP++
Sbjct: 753 KDTRGAKTCFERILSMDPSNVQAKHNLCVVYFEERELQRAERCLVDTLAMAPQE 806


>gi|299131799|ref|ZP_07024994.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
 gi|298591936|gb|EFI52136.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
          Length = 624

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 19/200 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+GDL+ A     +A+ ++P             +   +   A+T   +       +    
Sbjct: 100 RLGDLDGAADAYRRAIALNPGFAAAFHDYGNVLLGQGKPDEALTCYTRAIGIDPFY---- 155

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A     R+           +     E+L +  +++ A    +  L +  +  +A   +E+
Sbjct: 156 ASAHHQRAKVLQTFERHAEALAAFNEALAIKPDNVEALCRRSTVLFALKRFDEALASVEQ 215

Query: 286 IWKVNPHPEIANIYTHLLS--ENTVGKLKRA-LRLE------EINKESVESLVIVSKIAL 336
             +V+P       Y    +   +T+ +L R    L        ++ E  E L+  S    
Sbjct: 216 AKRVDP------TYVEAFNICGSTLHRLDRFDEALASFAHALSLDSERPEVLLNRSATFD 269

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
           E+   ++A      A+ I P
Sbjct: 270 ELHRFEEAALDLDAALTINP 289


>gi|584834|sp|P37718|ACSC_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|580743|emb|CAA38489.1| acsC [Gluconacetobacter xylinus]
 gi|1090660|prf||2019362C acsC gene
          Length = 1302

 Score = 43.4 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 24/288 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154
                 A + +  +  ++   +  +  +   ++ + E Q + A+  L  +        ++
Sbjct: 433 TGQTGEAERNYRAILARN--GDNPIALMGLARVLMGEGQESEANALLSRLGGRYSDQVQQ 490

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             V  +  E+ R  D         +A+  +PD PW+   +        + + A   +   
Sbjct: 491 IEVSGIMAEAARTSDSAQKVSLLRQAMTKAPDDPWLRINLANALQQQGDSAEAANVMRPL 550

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLIS 272
             + +     +A +L A      +  D +A    A     L  +    +I   A +  I 
Sbjct: 551 LTSPRTPADYQAAILYASG----NGNDTLARRLLA----GLSPDDYSPAIRTIADEMAIK 602

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +   +  ++       NP P +         + T  +      L     + + + + + 
Sbjct: 603 ADLASRLSMV------SNPTPLVREALAA--PDPTGARGVAVADLFRQRGDMLHAHMALR 654

Query: 333 KIALEMGSIDQAH--AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             +     +      A A   MKI+       LLA +   +   T   
Sbjct: 655 IASTRNIDLTTEQRLAYATEYMKISNPVAAARLLAPLGDGSGTATGSA 702


>gi|319787163|ref|YP_004146638.1| transglutaminase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465675|gb|ADV27407.1| transglutaminase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 379

 Score = 43.4 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 9/184 (4%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            +++ +    + +R  A     R  E   +GD+  +      +L+  D  + A       
Sbjct: 167 LVSRSRPRGVDDDRALAHFHNNRGAELMAEGDLGGALASLEAALEEDDRFVPAWNNLGVL 226

Query: 270 LISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEINKES 324
           L   +    A   LE   +++P H      +  +Y  +  E+ + +   AL+L++I    
Sbjct: 227 LQRLDDTGGARRALETGHRLDPDHASTLTNLVALYRRI-GEDALAR-NHALKLDQIQAND 284

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILYWTQ 383
                +++      G    A +   +A++I   +  F   LA+    +    +       
Sbjct: 285 PFHQFMLAMECENRGDYACAISHYRVAIRIQEGEHQFHFGLARAYFLDGQPGNAQRE-LG 343

Query: 384 SALH 387
            AL 
Sbjct: 344 RALT 347


>gi|298244040|ref|ZP_06967847.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297557094|gb|EFH90958.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 515

 Score = 43.4 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 72/248 (29%), Gaps = 13/248 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIG 168
                  +    Y    +    ++ Y  A       L +  T         L   +    
Sbjct: 204 RALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPTLATVYYNRGLTLAAL--N 261

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           +   A +    AL+++PD   V       Y     ++ A+    +   + +E      + 
Sbjct: 262 EHTRALQDFQHALELNPDLDIVYADRAASYAALGMYNEALQDFQRSITHDEE----NVLA 317

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           +  R        +   +  D    L    N   A    A++ +      +A V   + W+
Sbjct: 318 IFQRGTTYLRLNEAHKALQDFNYVLAHEPNLARAYAQRAEAHLRLGNLVQARVDYRQSWE 377

Query: 289 ---VNPHPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
               +  P     +  +  ++  G +  +    +   N     + +  +   L     ++
Sbjct: 378 LDSTHIEPAWMGAWLDMCLDDYPGAISPETLEEIASRNPADYHACLCRAVAHLLREQPER 437

Query: 344 AHAKAMLA 351
           A ++   A
Sbjct: 438 ALSELAGA 445


>gi|302383515|ref|YP_003819338.1| hypothetical protein Bresu_2406 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194143|gb|ADL01715.1| TPR repeat-containing protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 602

 Score = 43.4 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 22/231 (9%)

Query: 68  CPAMLFHMLHK--------RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            PA +  + H         +   K    L   + +I   +   A +    +S      + 
Sbjct: 33  SPAAIRRLSHALAGKGPSAKAQRKAIDTLKAAVAAIRVGDYATATR--RCLSVLQADEHN 90

Query: 120 YLVYLLEVQIALAERQYNIAHEKLE----MMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
            L + +       E   + A    +    ++ + PA      + L   + R+G L+ A++
Sbjct: 91  GLAWHVLAISREKEGHLSDALNAYDSALCLLPEDPAIA----HDLARLAQRLGHLDIAEK 146

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              K L + P     T  +       K ++ A+  L    +  ++       L    S  
Sbjct: 147 LLLKFLAVEPGHVEGTNNLACVLRDQKRYTEAVDRLRDLIQIEQDSPTLWNTLGTVLS-- 204

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             D+G M  S     E+L+L      A    A  L    +  +A   L++ 
Sbjct: 205 --DQGQMKESLTFFDEALRLDPAFAKARYNRANVLQPLGQPDRALADLDEA 253


>gi|169827526|ref|YP_001697684.1| hypothetical protein Bsph_1967 [Lysinibacillus sphaericus C3-41]
 gi|168992014|gb|ACA39554.1| Hypothetical ypiA protein [Lysinibacillus sphaericus C3-41]
          Length = 422

 Score = 43.4 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 69/205 (33%), Gaps = 8/205 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +GD + A     +  + SP+ P     +   Y +   +  A   +N+      +    
Sbjct: 80  MELGDEDEALNLLLEIEEGSPEYPQALLVLADYYQMQGLFEVAEKRINEALAILPD---- 135

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVI 282
             +L  A++    + G  + +     E  +  +      +    A+   +      A   
Sbjct: 136 EPLLHFAKAELLFETGRFLEAARLYEELNEQQEEFAGIHLVERLAEVYRAGAAYETALDY 195

Query: 283 LEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             K  +    P+I     Y+   S+     +K+   L+E++ +   + +++++       
Sbjct: 196 YLKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAYLLLAESYAMTEE 255

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLA 365
             +A+      +K     +   L A
Sbjct: 256 NQKAYTAIQEGLKRDEYDKTLYLFA 280



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 98/285 (34%), Gaps = 27/285 (9%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIG 168
                  +E L++  + ++     ++  A    E + +        ++ +   +   R G
Sbjct: 128 EALAILPDEPLLHFAKAELLFETGRFLEAARLYEELNEQQE-EFAGIHLVERLAEVYRAG 186

Query: 169 -DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
               +A  Y  KAL+       +  A    +  ++++  AI  L + K+   ++     +
Sbjct: 187 AAYETALDYYLKALEDEVKPDILFGAAYSAF-QSQKYEMAIKQLEELKELDPDYFSAYLL 245

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L  + ++   ++     +Y    E LK  +      + A K  +  +   +AE  L +  
Sbjct: 246 LAESYAMTEENQ----KAYTAIQEGLKRDEYDKTLYLFAGKMALKNSLPVEAEQYLREAI 301

Query: 288 KVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSI 341
            ++P      +A I      E     ++    L++      E   +    ++    +   
Sbjct: 302 ALDPEYMEAVLALISVLGQQERNEDVIELFETLQQ---NDFEWSTLYPFAAEAYENLELY 358

Query: 342 DQAHAKAMLA---MKIAPR---KEIFLLLAQIEQANSHNTDKILY 380
           D+A+    LA    K       K ++ LL   E+        +L 
Sbjct: 359 DRAYEFYRLAYNDFKEDATFLEKYVYFLL---EEGKRSEAKVVLE 400


>gi|150010168|ref|YP_001304911.1| TPR domain-containing protein [Parabacteroides distasonis ATCC
           8503]
 gi|149938592|gb|ABR45289.1| TPR-domain containing protein [Parabacteroides distasonis ATCC
           8503]
          Length = 999

 Score = 43.4 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 70/207 (33%), Gaps = 23/207 (11%)

Query: 93  MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147
           ++ A  ++  A+++ S V  S    F  E      + +I   ++ Y  A E  +    + 
Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-----PWVTEAVVQQYVLAK 202
           + P  +E A   L   +   G    A   A   L   P               + Y+  K
Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEAL-LAANNLLKEPKLSPEIMSEARYVRAKAYISLK 890

Query: 203 EWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LC 256
           + ++A+  L +  K+ +  +   A  LL     +N D  +      + IE+       L 
Sbjct: 891 QENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLA 950

Query: 257 DNSIMASICAAKSLISQNKKRKAEVIL 283
              I      A   I Q    +A   L
Sbjct: 951 RGFI----LLADIYIRQGDDFQARQYL 973


>gi|284041501|ref|YP_003391841.1| glycosyl transferase family 2 [Conexibacter woesei DSM 14684]
 gi|283945722|gb|ADB48466.1| glycosyl transferase family 2 [Conexibacter woesei DSM 14684]
          Length = 797

 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 69/229 (30%), Gaps = 20/229 (8%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAITFLNQKKKNAKEWNR 223
            GD   A+  A +AL+  P     T+ V +Q   A        AI +  +        +R
Sbjct: 419 RGDDAIAR--AEEALERFPGF---TDLVFEQAAAAQALGRTDDAIAYFERCIAMGDAPSR 473

Query: 224 NRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             A +        IA +      GD  A+      +L          +  A +L+    +
Sbjct: 474 YTATVGMGTYLPTIALAEIRHQHGDPAAAVELLDGALAAHPGFFGLVLPFAAALLDDGAE 533

Query: 277 RKA--EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
                  + E + K+ P               T    ++   L      S  + V +++ 
Sbjct: 534 PDVVVARVEELVAKLTPTVRFMLGTALYEHGETEAAEQQYRELLAQQPSSGHARVALAEA 593

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFL---LLAQIEQANSHNTDKILY 380
            L     D+A A A       P         L A+I   +      +L 
Sbjct: 594 LLSQRRWDEAAAVAAELNDAEPHAGAARRSELFARITGGDHTGAAAVLA 642


>gi|194226638|ref|XP_001915085.1| PREDICTED: similar to SMILE protein [Equus caballus]
          Length = 915

 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPTEALKNFNRALELNPKHK 631

Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
                S +++ +   E+    +A  + +  +   P     +  L  +   +  +++    
Sbjct: 632 LALFNSAILMQESG-EVKLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 689

Query: 381 WTQSALHAMPD 391
           W + A+    D
Sbjct: 690 WMKKAIKLQAD 700


>gi|332221054|ref|XP_003259672.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
           [Nomascus leucogenys]
          Length = 914

 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 68/194 (35%), Gaps = 14/194 (7%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   
Sbjct: 511 RQIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRG 570

Query: 268 KSLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES 324
           + L+  NK  KA E  L+ +     + ++       H+  +     L+   R  E+N + 
Sbjct: 571 ELLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALRNFNRALELNPKH 630

Query: 325 VESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377
               + +   A+ M          +A  + +  +   P     +  L  +   +  + + 
Sbjct: 631 ---KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE- 686

Query: 378 ILYWTQSALHAMPD 391
              W + A+    D
Sbjct: 687 AEIWMKKAIKLQAD 700


>gi|329119499|ref|ZP_08248184.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464432|gb|EGF10732.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 390

 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 22/191 (11%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY- 158
              AR++      Q      Y + L   ++  +  + + A   L+ +   P T       
Sbjct: 58  GKAARELAEAADTQ---PQSYELNLTLAKLYRSRGENDKAARLLQKLADSPDT--VGGRK 112

Query: 159 -------SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                   L ++S  + D       + +  + +       E ++  Y   ++W +A+   
Sbjct: 113 EAVLFELGLTYQSAGLVDRAEQIFLSLENGNTAKG---ARERLLNIYQQDRDWEKAVAAA 169

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAK 268
                + + +    A      +     K D  A+      A+++   C     ASI    
Sbjct: 170 QALSHDEQTYRFETAQFYCEMAQAALFKSDYAAARERVASALDANGKCSR---ASIILGD 226

Query: 269 SLISQNKKRKA 279
               +     A
Sbjct: 227 IEQKEGNYAAA 237



 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 68/240 (28%), Gaps = 50/240 (20%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W   A+      A  W  A   +    K AK             +LE     +   +  +
Sbjct: 9   WPLLALTPFICFALGWFAARVDMKTVLKQAKILP-----AAFYCALEALVDRNSGKAARE 63

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK---------------------IW 287
             E+      S   ++  AK   S+ +  KA  +L+K                      +
Sbjct: 64  LAEAADTQPQSYELNLTLAKLYRSRGENDKAARLLQKLADSPDTVGGRKEAVLFELGLTY 123

Query: 288 KVNPHPEIAN-IYTHLLSENTV----GKL--------------KRALRLEE----INKES 324
           +     + A  I+  L + NT      +L                A  L         E+
Sbjct: 124 QSAGLVDRAEQIFLSLENGNTAKGARERLLNIYQQDRDWEKAVAAAQALSHDEQTYRFET 183

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKILYWTQ 383
            +    +++ AL       A  +   A+          ++L  IEQ   +    I  +T 
Sbjct: 184 AQFYCEMAQAALFKSDYAAARERVASALDANGKCSRASIILGDIEQKEGNYAAAIEAYTA 243


>gi|254447290|ref|ZP_05060757.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           HTCC5015]
 gi|198263429|gb|EDY87707.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           HTCC5015]
          Length = 378

 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 53/185 (28%), Gaps = 37/185 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             I  A ++H  +  + T    +  L  L   Q  LA    + A                
Sbjct: 83  GEIEKAIRVHQNLIARPTLSPSDRSLALLELGQDYLAAGVLDRAE--------------- 127

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQK 214
               L+ +    G+                      + ++  YV  +EWS AI       
Sbjct: 128 ---GLFQQVSVSGNRQV----------------EAMKGLLNIYVQEQEWSTAIDIASELN 168

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +    +++   A     ++ E  +   +  +      + ++   S+  +   A+      
Sbjct: 169 RLTKDDYSHQVAHFYCEQAREAINNQQLEKARQWLQRAQQVDGFSLRVNYMRAQLEQELG 228

Query: 275 KKRKA 279
              +A
Sbjct: 229 HYSQA 233


>gi|34392434|dbj|BAC82544.1| cellulose synthase subunit C [Gluconacetobacter hansenii ATCC
           23769]
          Length = 1302

 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 91/288 (31%), Gaps = 24/288 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154
                 A + +  +  ++   +  +  +   ++ + E Q N A+  L  +        ++
Sbjct: 433 TGQTGEAERNYRAILARN--GDNPIALMGLARVLMGEGQENEANALLSRLGGRYSDQVQQ 490

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             V  +  E+ R  D         +A+  +PD PW+   +        + + A   +   
Sbjct: 491 IEVSGIMAEAARTSDSAQKVSLLRQAMTKAPDDPWLRINLANALQQQGDSAEAANVMRPL 550

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLIS 272
             + +     +A +L A      +  D +A    A     L  +    +I   A +  I 
Sbjct: 551 LTSPRTPADYQAAILYASG----NGNDTLARRLLA----GLSPDDYSPAIRTIADEMAIK 602

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +   +  ++       NP P +         + T  +      L     + + + + + 
Sbjct: 603 ADLASRLSMV------SNPTPLVREALAA--PDPTGARGVAVADLFRQRGDMLHAHMALR 654

Query: 333 KIALEMGSIDQAH--AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             +     +      A A   MKI+       LLA +   +   T   
Sbjct: 655 IASTRNIDLTTEQRLAYATEYMKISNPVAAARLLAPLGDGSGTATGSA 702


>gi|134106567|ref|XP_778294.1| hypothetical protein CNBA2940 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260997|gb|EAL23647.1| hypothetical protein CNBA2940 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 773

 Score = 43.4 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 8/234 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y +A      + Q    R  ++  L      + DL +    +   + IS  +P    AV
Sbjct: 498 NYAMARRAFTFLQQQEPYRIQSMEQLSTLLWHLTDLPALSHLSQSLISISRSSPQAWIAV 557

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              + L K+   A+    +  +     +   A        E  +  +   +      +++
Sbjct: 558 GNCFSLQKDHDEAMRCFRRATQ----VDEGCAYAWTLCGYEAVEMEEYERAMAFYRTAIR 613

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKL 311
                  A        +  ++ R AE    +  ++NP   +      +    S++ V  L
Sbjct: 614 TDARHYNAWYGMGLVYLKTDRPRYAEHHFRRAVEINPTNPVLLCCVGMALEKSDDVVQAL 673

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLL 364
               R  +    S        +  + +   D+A +  +     AP +  +F LL
Sbjct: 674 HFYERASKYAPTSAMVQFKRIRALVALQRYDEAISALVPLTHSAPDEANVFFLL 727


>gi|331662694|ref|ZP_08363617.1| putative heat shock protein [Escherichia coli TA143]
 gi|331061116|gb|EGI33080.1| putative heat shock protein [Escherichia coli TA143]
          Length = 273

 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 15/163 (9%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  A+  L  +    G  + A+             I 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIG 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++Q Y    EW +AI    +  K  K+  R   A      +L++    D+ 
Sbjct: 143 -----ALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLD 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +     +      NS   SI   +  +++ +  KA   L+++
Sbjct: 198 RAMALLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRV 240


>gi|307543978|ref|YP_003896457.1| type IV pilus assembly protein PilF [Halomonas elongata DSM 2581]
 gi|307216002|emb|CBV41272.1| K02656 type IV pilus assembly protein PilF [Halomonas elongata DSM
           2581]
          Length = 240

 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 11/187 (5%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y+   + SRA   L+   K A +     A    A ++ +  +GD   +  +   +L+  
Sbjct: 51  AYLARDDLSRASEALDHALKLAPD----DAEARQAMAMVHHRRGDDALAEENFRAALRDA 106

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI------YTHLLSENTVGK 310
            +   A    A  L  Q + R+A   L++  +   +   A +                 +
Sbjct: 107 PDLTRARNNYAAFLYDQGRIREACQQLQRASEDTHYTNRAQLLVNLGRCQRATGNEAAAR 166

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
                R   I+     S + ++++ +  G +  A        + A +  +   LA++   
Sbjct: 167 -ASFERALRIDPGRPGSHLHLAELDVAQGRLASAERHLERYRRQAGQDALSARLAEVIAR 225

Query: 371 NSHNTDK 377
              + D+
Sbjct: 226 ARDDHDR 232


>gi|300312980|ref|YP_003777072.1| N-acetylglucosaminyl transferase [Herbaspirillum seropedicae SmR1]
 gi|300075765|gb|ADJ65164.1| N-acetylglucosaminyl transferase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 391

 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L  P         A+Y L  +  + G L+ A+    + +D    A  
Sbjct: 84  GETERAIRVHQNLLARPDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQYSAQ- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248
              A+++ Y   KEW RAI+     +        R  A      + +   + +  A+   
Sbjct: 143 AGRALLEIYQREKEWERAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTEAAMAL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             ++L     S+ A++    +L +Q     A     + W+   H
Sbjct: 203 LEKALAADRKSVRATMLMGDALRAQGDIEGAL----ETWRRVEH 242


>gi|294674663|ref|YP_003575279.1| hypothetical protein PRU_2004 [Prevotella ruminicola 23]
 gi|294471998|gb|ADE81387.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
          Length = 681

 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 35/212 (16%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +     E+ +      A  Y  K +  +P   +    +      ++E+ RA+T ++   K
Sbjct: 31  LRG--HEAIQEQKYEDALDYFNKDVQENPKNGYSFVWIASLRTRSEEYGRALTAVDLAIK 88

Query: 217 NAKEWNRNRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
              + + +        R       GD I +  D  E+++L  N        A+    Q  
Sbjct: 89  YLPKKDVDYTSFAHTTRGDIYLHLGDTIKALSDYTEAIRLKPNETKPYEDRAQVYYEQGD 148

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
                                  Y    ++          ++ E+    V   + + + A
Sbjct: 149 -----------------------YARSDAD--------YRKMIELKPGDVMGYMGIGRNA 177

Query: 336 LEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQ 366
                   A  +    +K+      ++   A+
Sbjct: 178 NAQEQWVNAIKQFDYVVKLDNNYSSVYSFRAE 209


>gi|294624686|ref|ZP_06703355.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601017|gb|EFF45085.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 837

 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L  +    G   +A  +  KA+DI P         V+ +    ++  A   L   ++ 
Sbjct: 418 YALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKNATETLRVAEQF 477

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   A+ + +  ++     D   +    I+  +L  +   A   AA  L   N+  
Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADSWIQMAELYPDYAPAQANAAMDLFVANRFA 534

Query: 278 KA 279
            A
Sbjct: 535 DA 536


>gi|108761759|ref|YP_630235.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108465639|gb|ABF90824.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 240

 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 15/178 (8%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQ 174
           +E L  LL   +    ++QY  A + L  +++   T    F +  + +     G    AQ
Sbjct: 2   DEPLKQLLTLGRGYFEKKQYAQAEQYLAKIVEQNPTFADVFNMLGIIYH--DQGQFARAQ 59

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ---KKKNAKE-----WNRNRA 226
           R    AL ++P        +   Y    +++ A         ++K+  +       +  A
Sbjct: 60  RAFESALKLNPAYTEAALNLAVIYNDMGKYAEAKEVYQAALSQQKSGPDELDPYVEKKIA 119

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            +        A  G    +  +   +L LC   +   +    +L        A  ++E
Sbjct: 120 NMYGEIGDVFASSGVWAKAIEEYRRALALCPQFVDIRLKLGNALRDAGD--NAAALIE 175


>gi|58258631|ref|XP_566728.1| ubiquitin-protein ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57222865|gb|AAW40909.1| ubiquitin-protein ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 773

 Score = 43.4 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 8/234 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y +A      + Q    R  ++  L      + DL +    +   + IS  +P    AV
Sbjct: 498 NYAMARRAFTFLQQQEPYRIQSMEQLSTLLWHLTDLPALSHLSQSLISISRSSPQAWIAV 557

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              + L K+   A+    +  +     +   A        E  +  +   +      +++
Sbjct: 558 GNCFSLQKDHDEAMRCFRRATQ----VDEGCAYAWTLCGYEAVEMEEYERAMAFYRTAIR 613

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKL 311
                  A        +  ++ R AE    +  ++NP   +      +    S++ V  L
Sbjct: 614 TDARHYNAWYGMGLVYLKTDRPRYAEHHFRRAVEINPTNPVLLCCVGMALEKSDDVVQAL 673

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLL 364
               R  +    S        +  + +   D+A +  +     AP +  +F LL
Sbjct: 674 HFYERASKYAPTSAMVQFKRIRALVALQRYDEAISALVPLTHSAPDEANVFFLL 727


>gi|302878301|ref|YP_003846865.1| Methyltransferase type 11 [Gallionella capsiferriformans ES-2]
 gi|302581090|gb|ADL55101.1| Methyltransferase type 11 [Gallionella capsiferriformans ES-2]
          Length = 949

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 66/233 (28%), Gaps = 11/233 (4%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              +   +  A  +   M +           L     + G  + A   A  A  +SP+  
Sbjct: 159 SLFSSGNFTEAENRARSMTEHYPAHWVGWKMLGVIFQQQGKNSEALMPALTASKLSPNDA 218

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +          + A     +       + +  + L           G M  +   
Sbjct: 219 ETHNNLGIILDSLGRPTEACVSYRKALTLNPNYIQAHSNL----GATLQKSGHMKEAATS 274

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303
             ++L L      A       L    + + A    ++   ++  P+ A  + +L      
Sbjct: 275 YQKALALNPGYAKAHNNLGAVLSEMGEFQLAAASFKRA--LHIQPDNAQAHYNLSIVQKK 332

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  +       +IN +  ++   +  I  ++  + +A A    A++  P
Sbjct: 333 MGAASDAIDSCRAALQINPDDADAHYNMGTILFDLNHLSEAEAAFRQALRCQP 385


>gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon]
 gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured
           archaeon]
          Length = 739

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 21/200 (10%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN- 224
           ++G    A     KA++I P                  +  AI   ++  +   ++ R  
Sbjct: 341 KLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAW 400

Query: 225 --RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             + + L     +     + IA+Y  AIE          A      +L    +  +A   
Sbjct: 401 NNKGVALC----DLGRNEEAIAAYDKAIEIN---PQFAGAWNNKGAALGKLGRYEEAIAA 453

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI------AL 336
            +K  ++N  P+ A  + +      +GKL R         +++E+    ++       AL
Sbjct: 454 CDKAIEIN--PQFAEAWNN--KGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLAL 509

Query: 337 E-MGSIDQAHAKAMLAMKIA 355
             +G  ++A A    A++I 
Sbjct: 510 SGLGKYEEAIAAHDKAIEIN 529



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 11/137 (8%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+  L       G    A     +A++I+P                 ++  AI   +  
Sbjct: 609 VALRGL-------GRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNA 661

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +   ++    A     + +  +D G    +      ++++      A       L    
Sbjct: 662 IEINPQY----ADAWTNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSG 717

Query: 275 KKRKAEVILEKIWKVNP 291
           +  +A+   EK  +++P
Sbjct: 718 RYEEAKEAFEKAHEIDP 734


>gi|239906032|ref|YP_002952771.1| hypothetical protein DMR_13940 [Desulfovibrio magneticus RS-1]
 gi|239795896|dbj|BAH74885.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 1074

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 27/219 (12%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +    G++ +A   A +A ++ P                + +  A   L    K +  +
Sbjct: 507 RDKWEAGEVEAALGLAGRAQELDPGHGEA-------KAARERYVAARDRLIAALKQSAAY 559

Query: 222 NRNRAILLIARSLENADKGDM----IASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +     A++L++A         +A    AI + K    S+   +  A+   +     
Sbjct: 560 LAAKRFDSAAKALDDARAVSPKFKAVAEMEAAIAARKQRAWSLDERLARARDQWNAGDAD 619

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            A   + +   ++P                    ++ L L   N    E     ++ AL 
Sbjct: 620 AALATVSEAAALDP------------EHQGAAHARKNLALARDNLAKAEER---AETALG 664

Query: 338 MGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375
            G +D+A +    A KI PR   I  L   +      + 
Sbjct: 665 KGKLDEARSALADAAKINPRHPRIAELQTSVAHRAGRDQ 703


>gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 515

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 75/261 (28%), Gaps = 33/261 (12%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             +  A++K +           A Y +      +GD  +A     KA+DI P        
Sbjct: 179 GNFIGAYDKFKAAAVADPNGYEAYYYMGLCKMELGDYPAAITNFDKAIDIKPKYTAAFSK 238

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR------------SLE- 235
                        AI       K    +     NR   + L++R            +L+ 
Sbjct: 239 RGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQP 298

Query: 236 ------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                        A+ G  + +  D  +++ L  N   A      S    +    A    
Sbjct: 299 DNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDF 358

Query: 284 EKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            K  +++P  HP      Y      +  G +K   +   +  +  E+    +     MG 
Sbjct: 359 NKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKPQYEEAYFQKANTLYMMGD 418

Query: 341 IDQAHAKAMLAMKIAPRKEIF 361
              A  +    +K  P +   
Sbjct: 419 KTAAIKEYDEIVKKFPNESAA 439


>gi|323698517|ref|ZP_08110429.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           sp. ND132]
 gi|323458449|gb|EGB14314.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 208

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               D   A+R    A+  SP        +    +   +       +        +  + 
Sbjct: 36  LSRRDFLEAEREFLDAVAHSPRMAEAYVQLGGIALQRGD-------MESCLSYNVQATQQ 88

Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R   A+           +GD   ++    ++LKL  +   A    +  LI+ N   +A+ 
Sbjct: 89  RPFFAVPWGNIGFVYMQQGDNDKAHKSLKKALKLDPDFAQAQATMSSVLIAMNDFEEADK 148

Query: 282 ILEKIWKVNPH 292
           +L+ + + + H
Sbjct: 149 LLKTLLEKHAH 159


>gi|302343164|ref|YP_003807693.1| hypothetical protein Deba_1732 [Desulfarculus baarsii DSM 2075]
 gi|301639777|gb|ADK85099.1| TPR repeat-containing protein [Desulfarculus baarsii DSM 2075]
          Length = 587

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 27/251 (10%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L T L+     +  LA+       +     ++  + L   ++   ++      E  + + 
Sbjct: 336 LATALLEAGRRDEALAQLERLAAMR----PDDAAILLKMARLLDEKKDRKRLTELYDRLG 391

Query: 148 ----QIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                 P       V  L+ ++ R+    +A + A  A    PD   V EA  +     K
Sbjct: 392 KLRPDDPDINFNLGV--LHLDAGRLD--QAADKLAVVA-KAKPDDLDVQEAYFEALASQK 446

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +W        Q        +  +   ++   L       + A    A+E+     +    
Sbjct: 447 KWD---QAAEQAAAMFAANDAAKVAAIVYPGLAANRPDKLAAMLDKALEAKPAAKSLYE- 502

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRL 317
               A   + + K R+A   L K  +  P  ++A           L  +    L    ++
Sbjct: 503 --MRATLALDREKPREAAKALAKAVEAFPD-DLAMAMRLAELYEALGNDAKA-LALFEKI 558

Query: 318 EEINKESVESL 328
            + N +  E+ 
Sbjct: 559 LDKNADYPEAQ 569



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 40/259 (15%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           Y+ A E L+  L            L     +      A    ++ L  SP    +   + 
Sbjct: 175 YDQAVEMLKAALAEKDDPAL-QRKLADLYAKQDKPEQALALWSRLLPASPQDAQLLSDMA 233

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                 + W +A   L++      +  R +A  L+ ++      G    +     ++   
Sbjct: 234 AAQEQLRRWPQAAESLDR--LAGLQRGRLKAATLLRQAKALQLAGQTERAVEATSQAATA 291

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------------------PEIA 296
              ++      A  + +  ++ +   +L K   ++P                      +A
Sbjct: 292 DPQNVAVWNDLADQMGALGRRGQQLDVLTKAADLHPTDFILQQRLATALLEAGRRDEALA 351

Query: 297 NI--YTHLLSENTVGKLKRAL----------------RLEEINKESVESLVIVSKIALEM 338
            +     +  ++    LK A                 RL ++  +  +    +  + L+ 
Sbjct: 352 QLERLAAMRPDDAAILLKMARLLDEKKDRKRLTELYDRLGKLRPDDPDINFNLGVLHLDA 411

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G +DQA  K  +  K  P 
Sbjct: 412 GRLDQAADKLAVVAKAKPD 430


>gi|296133442|ref|YP_003640689.1| TPR repeat-containing protein [Thermincola sp. JR]
 gi|296032020|gb|ADG82788.1| TPR repeat-containing protein [Thermincola potens JR]
          Length = 345

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 4/193 (2%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
              L +++  Y +      N+    L           Y  A E  +  L +      A Y
Sbjct: 6   ENSLKQQVEFYKTAVANAPNDTAALLRLGYALAKSGMYREAEETYKKALAVEPDLYLAEY 65

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L +   +    + A     +A++I+PD       +   Y   K+  ++   L  KK  A
Sbjct: 66  GLGYIYLKEKRYDDAVLRFQRAININPDYVQAYYRLGYLYWEIKDLDKSQELL--KKVIA 123

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E N  +A   + +       G    +     +++    +   A      +    NK  +
Sbjct: 124 LESNHAKAHFYLGKVHNTL--GQWDKAKEYLEKAVAYNPDFDFAWYQLGLAFQGMNKTAE 181

Query: 279 AEVILEKIWKVNP 291
           A  + +K  ++NP
Sbjct: 182 ALAVFQKALEINP 194



 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 15/140 (10%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+L +  +L  A  G    +     ++L +  +  +A        +   +KR  + +L  
Sbjct: 29  ALLRLGYAL--AKSGMYREAEETYKKALAVEPDLYLAEYGLGYIYLK--EKRYDDAVLRF 84

Query: 286 IWKVNPHPE-------IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
              +N +P+       +  +Y  +   + +   LK+ + LE       ++   + K+   
Sbjct: 85  QRAININPDYVQAYYRLGYLYWEIKDLDKSQELLKKVIALES---NHAKAHFYLGKVHNT 141

Query: 338 MGSIDQAHAKAMLAMKIAPR 357
           +G  D+A      A+   P 
Sbjct: 142 LGQWDKAKEYLEKAVAYNPD 161


>gi|255318855|ref|ZP_05360081.1| tetratricopeptide repeat domain protein [Acinetobacter
           radioresistens SK82]
 gi|255304111|gb|EET83302.1| tetratricopeptide repeat domain protein [Acinetobacter
           radioresistens SK82]
          Length = 519

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 67/176 (38%), Gaps = 7/176 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              L    +++KE N    ++LI  +   A  G +  +     ++L+         +  A
Sbjct: 113 REILLNALRSSKEKNNPSILVLI--AGLEAQNGQLEQALVTINQALRKRPKVTGFILMKA 170

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKES 324
             L++QN +  A+  LEK  +   +     +A +   + S      LK+   + +   ++
Sbjct: 171 NLLMAQNDQLAAQQWLEKSSRKQKYNLDIRLAEVRFLVKSNQAESALKKLQGILKQWPDA 230

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
            E+L I    ++++   +QA    +        +    + L    E+   + T K 
Sbjct: 231 EEALFIAGLTSIDLKQYEQAEKYLVELRYSDQYQNEAYYYLAVNAERKQHYETAKA 286



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 11/123 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPA--- 151
             N   A  +     +     +  L+Y    Q+ L +  +      + L+ +L+I     
Sbjct: 345 TGNKKAALALLDEAVKN-LPDDPELIY---AQVLLLDPFQDREKLDQTLKHLLEIEPNSP 400

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           T   A    Y  + +   LN A++YA  AL+ +P+   + + +    +L  ++  A+  L
Sbjct: 401 TYLNAY--AYTLALQNRRLNEARQYAEHALEYAPEQASILDTLGYVCILQNDYDTAVRVL 458

Query: 212 NQK 214
            + 
Sbjct: 459 AKA 461


>gi|119487755|ref|ZP_01621264.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119455588|gb|EAW36725.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 998

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 74/236 (31%), Gaps = 30/236 (12%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +Y+ A    +  +++  +  +A  +L     + G L  A+    KA++++P+  W +   
Sbjct: 335 KYSEAITAYQTAIELDNSLVYAYQNLGNLIKQQGSLTEAEAIYRKAIEVNPNH-WGSYLN 393

Query: 195 VQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +    +    +  AI           E    +  L +A                   E+ 
Sbjct: 394 LGNILLEQTHFEDAIAIYQTALTLNPEAVEVQQNLNLA-------------------EAA 434

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTV 308
           K            A+    Q K  KA    +   ++   P    +Y  L           
Sbjct: 435 KENP--APIYYTFAQQYYQQGKYNKAIQFFQNYLELQ--PGEVELYATLSDCFNQIHQPQ 490

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
             +K      +++  S +    +    L  G  + A ++A  A    P    F LL
Sbjct: 491 EAIKVLQTGTQVHPTSGQLHFSLILQLLRQGETEAAISQAETAFNYLPNDYTFKLL 546


>gi|113476308|ref|YP_722369.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110167356|gb|ABG51896.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1486

 Score = 43.4 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           +      A +   KA  I PD  W   ++ +     ++W  A+    +  +   +++ + 
Sbjct: 536 QQEKWEEAVKVYEKASQIKPDNSWYYNSLGEALKKLEKWEEAVMAYRKAIQLNPDFSWSH 595

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             L    +      G    +     +++KL  +  
Sbjct: 596 NNL----ADCLVKLGKREEAVVAYRQAIKLKPDFT 626


>gi|302876188|ref|YP_003844821.1| heat shock protein DnaJ domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307686920|ref|ZP_07629366.1| heat shock protein DnaJ domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302579045|gb|ADL53057.1| heat shock protein DnaJ domain protein [Clostridium cellulovorans
           743B]
          Length = 1112

 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 57/165 (34%), Gaps = 6/165 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI- 149
           GL+ + A+N+  A K     S+ +                      + A+E  ++ ++  
Sbjct: 771 GLIYLDAYNMEDAVKAFEKASEYNEDDAYPYNN--AGYACKVLGDLDRAYEFYKLSIERV 828

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                    ++      IG    A        +   +  W  + ++  Y    +W++A+ 
Sbjct: 829 KDGEFLPHRNMAVYYRIIGQYEKAIEIYEMIAEKGDNPIWANKRILDVYKQIGDWTKALD 888

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            + +  +  ++W       L+      A +G+   SY    +++K
Sbjct: 889 QVEKIFELEEDWV---MDFLLEGGDIFAYEGNARESYKLYKQAIK 930


>gi|254438924|ref|ZP_05052418.1| Sulfotransferase domain family [Octadecabacter antarcticus 307]
 gi|198254370|gb|EDY78684.1| Sulfotransferase domain family [Octadecabacter antarcticus 307]
          Length = 703

 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 79/238 (33%), Gaps = 12/238 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R GD       A +A+  +PD       +      A +         QK   A 
Sbjct: 87  LAEMRRRGGDATGGLDAARRAVAANPDIAIAQANLGIALYDAGDLDG--AEAAQKAALAI 144

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +  + RA+  +       D+GD  A+      +L+L  +    +      L+  +++ +A
Sbjct: 145 DPRQPRAVNNLGS--IARDRGDRKAAADLYRRALRLSPSDDEIASNLGTVLVEDDREDEA 202

Query: 280 EVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
             IL     V P      H  I     HL  +      +       I+ + + + V +S+
Sbjct: 203 LRILLPYINVRPKVPAEMHAVIGRA--HLRRDALDDAERALRTAINIDPKHISAHVGLSQ 260

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +  +    D+A   A  A +I P        A I        +K       AL A  D
Sbjct: 261 VLQQKNHADKALVVAAAAARIDPNSATAHHQAGICLGELGAPEKARDAYNRALAADTD 318



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 12/201 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD  +A     +AL +SP    +   +    V       A+  L           +
Sbjct: 159 ARDRGDRKAAADLYRRALRLSPSDDEIASNLGTVLVEDDREDEALRIL---LPYINVRPK 215

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A +       +  +  +  +      ++ +    I A +  ++ L  +N   KA V+ 
Sbjct: 216 VPAEMHAVIGRAHLRRDALDDAERALRTAINIDPKHISAHVGLSQVLQQKNHADKALVVA 275

Query: 284 EKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
               +++P+   A+    +        E       RA      + +   +L+ +  +A+E
Sbjct: 276 AAAARIDPNSATAHHQAGICLGELGAPEKARDAYNRA---LAADTDFHAALISLGYLAME 332

Query: 338 MGSIDQAHAKAMLAMKIAPRK 358
           +G  D+A      A+ ++  +
Sbjct: 333 LGDADEARTMFERALALSSDE 353


>gi|159028723|emb|CAO88195.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 565

 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 67/243 (27%), Gaps = 42/243 (17%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L YL +    LA      A      +L        A   +          + A +   +
Sbjct: 38  ALAYLWQGDRLLAAGDKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDR 97

Query: 180 AL------DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                    + P       A+   +   ++WS AI    +       +    A   + ++
Sbjct: 98  GFIVNDKPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYRKAMIIKPTFK---AQFQLGKA 154

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L +  + D   +      ++ L      A     K+   Q           ++W     P
Sbjct: 155 LYSLQRWD--EAAKALQAAVFLDPTQGKAYFYLGKAYSEQ-----------QLW-----P 196

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           E +  Y   L               E+     E    + +  ++ G  ++A      A+ 
Sbjct: 197 EASYAYQQAL---------------ELIPNQGEIYKKLGEALVKQGKWEEAEQIYRQALI 241

Query: 354 IAP 356
            AP
Sbjct: 242 YAP 244


>gi|121704604|ref|XP_001270565.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1]
 gi|119398711|gb|EAW09139.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1]
          Length = 544

 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 59/179 (32%), Gaps = 7/179 (3%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  LAE     A    +  +    T    +           +G  + A 
Sbjct: 31  DTPLSSLIASAKAHLAEGFARDALLYFDAAISRDPTNYLTIFQRG--ATYLSLGRSSQAL 88

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNR-NRAILLIAR 232
               + L + PD         +    + +W  A+  L +  K  + E+    +A     +
Sbjct: 89  GDFDRVLQLKPDFESALLQRARLRAKSADWEGALNDLEKAGKRVSAEYEELQKARDAALQ 148

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           + +  ++GD     + A  ++     S+      A     + +  +    L  + +++P
Sbjct: 149 ASDAENRGDWELCVNQANTAILKASTSLALRQTRAHCRFEKGEMEEGISDLAHVVQISP 207


>gi|83309106|ref|YP_419370.1| thioredoxin domain-containing protein [Magnetospirillum magneticum
           AMB-1]
 gi|82943947|dbj|BAE48811.1| Thioredoxin domain-containing protein [Magnetospirillum magneticum
           AMB-1]
          Length = 310

 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 4/131 (3%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIW 287
            IA +    ++GD   +     + L+   ++  A     + LI+  +  +AE +L     
Sbjct: 141 YIAEAKRVLEEGDPQTAATIFNQILQEAPDNASAMAGLLRCLIAVGQTAQAESMLGRLAP 200

Query: 288 KVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           ++  HP+I   A           VG+     R    + +  ++   ++      G ++ A
Sbjct: 201 EIARHPDITAVATALELARHAGGVGEAAELRRRLAADPDDHQARYDLALAYYAAGEVETA 260

Query: 345 HAKAMLAMKIA 355
             + +   K  
Sbjct: 261 VDELLDLFKRD 271


>gi|27375838|ref|NP_767367.1| hypothetical protein blr0727 [Bradyrhizobium japonicum USDA 110]
 gi|27348976|dbj|BAC45992.1| blr0727 [Bradyrhizobium japonicum USDA 110]
          Length = 370

 Score = 43.4 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 11/205 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
            G    A  +   A   ++   +    +          Q     R +++A     E + +
Sbjct: 89  RGRAYSAKGDRDRAMADYNEAIRLDPGYGPSYTS--RAQEYFNRRDFDLAIAGFTEAIER 146

Query: 149 IPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            P    FA  +    + +   GD + A    T+A+  +P A W  E     +    E   
Sbjct: 147 NPKQAYFATVMRGEAYAAK--GDTDHAVADYTEAMQRNPAAAWPYELRSAVHFDKGEIDE 204

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+   N   +         A     R++    K D   +  +  E  ++    + A +  
Sbjct: 205 ALDDCNSAVRLEPGS----AGGHYCRAVVLVKKDDPDGAIREFDEVTRIAPAFVKAYLAR 260

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
           A +   +   + A    ++  ++ P
Sbjct: 261 AVAWHKKGDDKHAIADFDEAIRLQP 285


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 20/192 (10%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---PATR 153
             NI  A K+     +        L  ++         +   A +  E  L++   P + 
Sbjct: 453 CGNIKEASKIFEETDRDDIV---SLTAMINGYA--EHGKSKEAIDLFEKSLKVGFSPDS- 506

Query: 154 EFAVYSLYFESCRIGDLNSAQRYA---TKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                S+       G L+    Y     +  ++ P A      +V     A   S A   
Sbjct: 507 -VTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRP-AKEHYGCMVDLLCRAGRLSEAEKM 564

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           +++     K+      +L+  ++     KGD+      A   L+L      A +  A   
Sbjct: 565 IDE-MSWKKDDVVWTTLLIACKA-----KGDIERGRRAAERILELDPTCATALVTLANIY 618

Query: 271 ISQNKKRKAEVI 282
            S     +A  +
Sbjct: 619 SSTGNLEEAANV 630


>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
           platensis NIES-39]
          Length = 732

 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 106/388 (27%), Gaps = 91/388 (23%)

Query: 41  PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100
            + ++ I    L   +++F + +     P  +          K   AL  G+  + A + 
Sbjct: 311 LWTVVGIAATGLVGLMVIFGLFQVLNR-PDPV----------KSEAALKRGVERLEAGDP 359

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEV----QIALAE-RQYNIAHE-------------- 141
             A K  +   Q    ++E            Q        Y  A +              
Sbjct: 360 EAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSL 419

Query: 142 KLEMM---------------LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
               M               L    T  F    L        +  +A    T+ +   PD
Sbjct: 420 AYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLA--HYTQENYEAAILDYTEVIRRQPD 477

Query: 187 APWVTEAVVQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD- 238
                 A    +V A        +++ AI      +  A  +NR RA   +         
Sbjct: 478 HSEAYRARGSAHVKAGNLQAGMADYTEAIRL--NPQSAAAYYNRGRARFHLGDYQGALAD 535

Query: 239 -------KGDMIAS-------------YHDAIESLKLCDNSIM---------ASICAAKS 269
                  + D   +             Y  AIES                   +    ++
Sbjct: 536 YNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQN 595

Query: 270 L-ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
              +     KA  +     K + +  +     H L+E+    +    +   +N    ES 
Sbjct: 596 YDAAIGDCTKAIELEPNNSKAHSNRGL----VHSLAEDYEAAIADYSQAISLNPNDAESY 651

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              ++   E+G+  QA A    A++I P
Sbjct: 652 SNRAQAHAELGNYSQAIADYAQAIRIRP 679



 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 70/236 (29%), Gaps = 39/236 (16%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                E    GD  +A +   +++ + PD           Y   +++ +AI    Q  K 
Sbjct: 349 RG--VERLEAGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKL 406

Query: 218 AKE-----WNRNRAI-------------------------LLIARSLENADKGDMIASYH 247
                   +NR+ A                              R L +  + +  A+  
Sbjct: 407 DPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAAIL 466

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THL 302
           D  E ++   +   A      + +     +       +  ++N  P+ A  Y        
Sbjct: 467 DYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLN--PQSAAAYYNRGRARF 524

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              +  G L    ++     ++ E+        + +G+ + A      ++++ P  
Sbjct: 525 HLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTA 580



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 4/117 (3%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            ++A    TKA+++ P+           + LA+++  AI   +Q          N A   
Sbjct: 596 YDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNP----NDAESY 651

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             R+  +A+ G+   +  D  +++++  N   A         S   +R A    E+ 
Sbjct: 652 SNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQA 708


>gi|295676138|ref|YP_003604662.1| cellulose synthase operon C domain protein [Burkholderia sp.
           CCGE1002]
 gi|295435981|gb|ADG15151.1| cellulose synthase operon C domain protein [Burkholderia sp.
           CCGE1002]
          Length = 1320

 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 35/248 (14%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  ++    DL +A+    +A    PD       +    + A     A T   +    
Sbjct: 320 RGL--QALARNDLTAAEPLLARAASARPDDADAVGGLGIARMRAGRHDEARTLFLRAAAL 377

Query: 218 AKEWNRNRAILL--------IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           A +       L         +A+    A  G    +   A  +L +  ++  A +  A +
Sbjct: 378 APDNRTKWQSLARTAQFWGTLAQGRTAAAAGHAQDAERAARAALAMEPDNPDAKLMLADA 437

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           L++Q+  R AE +L  +      P +A + +        G+  +   L     ++++S  
Sbjct: 438 LLAQHDWRAAEPLLRDM-LSGQTPSVAALRSTQTLFENTGRAAQVEPLI----DALQSRF 492

Query: 330 IVS--KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
             +  + +L       A  +A L  K A       LLA  E+  +    +       AL 
Sbjct: 493 TAADDRASL-------ARLRADLLAKQAD-----QLLADGERGPAAQRYEA------ALR 534

Query: 388 AMPDPLWI 395
           + PD  W 
Sbjct: 535 SEPDAAWT 542


>gi|255012572|ref|ZP_05284698.1| TPR domain-containing protein [Bacteroides sp. 2_1_7]
          Length = 999

 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 93  MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147
           ++ A  ++  A+++ S V  S    F  E      + +I   ++ Y  A E  +    + 
Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL---DISPDA-PWVTEAVVQQYVLAKE 203
           + P  +E A   L   +   G    A   A   L    +SP+          + Y+  K+
Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEALLAANDLLKEPKLSPEIMSEARYVRAKAYISLKQ 891

Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LCD 257
            ++A+  L +  K+ +  +   A  LL     +N D  +      + IE+       L  
Sbjct: 892 ENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLAR 951

Query: 258 NSIMASICAAKSLISQNKKRKAEVIL 283
             I      A   I Q    +A   L
Sbjct: 952 GFI----LLADIYIRQGDDFQARQYL 973


>gi|254411584|ref|ZP_05025360.1| Sel1 repeat family [Microcoleus chthonoplastes PCC 7420]
 gi|196181306|gb|EDX76294.1| Sel1 repeat family [Microcoleus chthonoplastes PCC 7420]
          Length = 338

 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 57/194 (29%), Gaps = 7/194 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G++  A     +A  ++P        +      A +   A     Q  + A  +   
Sbjct: 91  IQQGNVADAIAAFRQAAQLNPQLAPAHYNLGLALRQAGQLQAAADAFYQATQIAPNF--- 147

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+          +  ++  +      +++L     +A       L    +   A    +
Sbjct: 148 -ALAYANLGAALLEGKNLPQARDALRRAIELDPELGVAHYNYGLVLSELGEYEVAIAAFQ 206

Query: 285 KIWKV---NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
              ++    P P       +L             +  +I+ +  E+   +  I  E G +
Sbjct: 207 NAMQLSSNAPEPAYHLGLVYLRQGQLEQAKAAFEQAIKISPQYPEAYYNLGSILFEQGDL 266

Query: 342 DQAHAKAMLAMKIA 355
           D A A    + +  
Sbjct: 267 DGALAAFRQSAESN 280



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 4/159 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A        Q+      A Y+L     + G L +A     +A  I+P+      
Sbjct: 93  QGNVADAIAAFRQAAQLNPQLAPAHYNLGLALRQAGQLQAAADAFYQATQIAPNFALAYA 152

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +    +  K   +A   L    + A E +    +      L  ++ G+   +      +
Sbjct: 153 NLGAALLEGKNLPQARDAL----RRAIELDPELGVAHYNYGLVLSELGEYEVAIAAFQNA 208

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++L  N+   +       + Q +  +A+   E+  K++P
Sbjct: 209 MQLSSNAPEPAYHLGLVYLRQGQLEQAKAAFEQAIKISP 247


>gi|149921658|ref|ZP_01910107.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
 gi|149817502|gb|EDM76972.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
          Length = 763

 Score = 43.4 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 32/96 (33%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           ALA+ + + A       +   +    AV  L      +G    A  YA KA  + P    
Sbjct: 659 ALAKGKRDKAERLFHKAIAADSRNASAVEGLARIHFDLGAYGEALGYAKKASRLRPRDEG 718

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           V   +   Y+    +S A     + +       + R
Sbjct: 719 VRLLLGDAYLKVLRYSNARAEYEKAQALGSPLAKKR 754


>gi|325925872|ref|ZP_08187241.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118]
 gi|325543703|gb|EGD15117.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118]
          Length = 837

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L  +    G   +A  +  KA+DI P         V+ +    ++ +A   L   ++ 
Sbjct: 418 YALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKKATETLRVAEQF 477

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   A+ + +  ++     D   +    I+  +L  +   A   AA  L   N+  
Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADSWIQMAELYPDYAPAQANAAMDLFVANRFA 534

Query: 278 KA 279
            A
Sbjct: 535 DA 536


>gi|317419434|emb|CBN81471.1| DnaJ homolog subfamily C member 7 [Dicentrarchus labrax]
          Length = 504

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         ++ A ++  +A
Sbjct: 177 KILKAECLALLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIDKAVQFFVQA 234

Query: 181 LDISPDAPWVTEA-----VVQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A      ++              +  A     +         +  A L
Sbjct: 235 LRMAPDHEKARLACRNAKALKAKKDEGNQAFKNNNYDAAYQLYTEALTIDPNNIKTNAKL 294

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R+   A    +  +  D   ++KL D  I A +  A+  ++  +  +A    EK+++
Sbjct: 295 YCNRATAGAKLKKLNEAIDDCTNAIKLDDTYIKAYLRRAQCYMNTEQYEEAVRDYEKVYQ 354

Query: 289 VN 290
             
Sbjct: 355 TE 356


>gi|148689710|gb|EDL21657.1| mCG142017, isoform CRA_b [Mus musculus]
          Length = 754

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195
            A E     L++        Y+L      + + N A +   +AL+++P         A++
Sbjct: 587 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 646

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            Q        +      ++  N        A       +   D      +     +++KL
Sbjct: 647 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 703

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285
             +   A    A       K+ KA  ILE+
Sbjct: 704 QPDFRSALFNLALLYSQTAKELKALPILEE 733



 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           A  I+P+   V   +             A     Q      ++ +      I+R      
Sbjct: 526 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 581

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
               + +    +++L+L  N+       A   I   +  +A     +  ++NP  ++A  
Sbjct: 582 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 641

Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
               L+ E+   KL     KR L       +       +  +A++     +A +    A+
Sbjct: 642 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 701

Query: 353 KIAPRKEIFL 362
           K+ P     L
Sbjct: 702 KLQPDFRSAL 711


>gi|26336877|dbj|BAC32122.1| unnamed protein product [Mus musculus]
          Length = 753

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195
            A E     L++        Y+L      + + N A +   +AL+++P         A++
Sbjct: 586 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 645

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            Q        +      ++  N        A       +   D      +     +++KL
Sbjct: 646 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 702

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285
             +   A    A       K+ KA  ILE+
Sbjct: 703 QPDFRSALFNLALLYSQTAKELKALPILEE 732



 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           A  I+P+   V   +             A     Q      ++ +      I+R      
Sbjct: 525 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 580

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
               + +    +++L+L  N+       A   I   +  +A     +  ++NP  ++A  
Sbjct: 581 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 640

Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
               L+ E+   KL     KR L       +       +  +A++     +A +    A+
Sbjct: 641 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 700

Query: 353 KIAPRKEIFL 362
           K+ P     L
Sbjct: 701 KLQPDFRSAL 710


>gi|78223139|ref|YP_384886.1| peptidase M, neutral zinc metallopeptidase, zinc-binding site
           [Geobacter metallireducens GS-15]
 gi|78194394|gb|ABB32161.1| Peptidase M, neutral zinc metallopeptidases, zinc-binding site
           [Geobacter metallireducens GS-15]
          Length = 426

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 13/135 (9%)

Query: 270 LISQNKKRKAEVILEKIWKV-NPHP----EIANIYTHLLSENTVGK------LKRALRLE 318
           LI + +  KA   LEK + + +  P     +A  Y  L  +  + +        +  +  
Sbjct: 40  LIERGEIEKAIEQLEKAYSLYSSDPILKGNLATAYA-LQGQRLLDRKSYADAAGQFEKAL 98

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDK 377
            +  +     ++         +   A  +   A  +     E    L +I        + 
Sbjct: 99  VLFPDEPRYHLLRGIAFTLAKNFPLARHELQQARNLGGETAEGLYFLGRIHYEEGETDEA 158

Query: 378 ILYWTQSALHAMPDP 392
           +  W ++A  A  DP
Sbjct: 159 LQNWEKAAALAPSDP 173



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 30/86 (34%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A     +      F +E   +LL        + + +A  +L+    +       +Y L  
Sbjct: 88  ADAAGQFEKALVLFPDEPRYHLLRGIAFTLAKNFPLARHELQQARNLGGETAEGLYFLGR 147

Query: 163 ESCRIGDLNSAQRYATKALDISPDAP 188
                G+ + A +   KA  ++P  P
Sbjct: 148 IHYEEGETDEALQNWEKAAALAPSDP 173


>gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Acyrthosiphon pisum]
          Length = 975

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 15/213 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWV 190
                A    E  +Q+ +    A+  L          GD+       +KA  I    P V
Sbjct: 9   GNAEKARLAFERAIQLDSKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDTTNPMV 68

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   +   K++++    L +      E    RA      +     + +   ++    
Sbjct: 69  LNHLSNHFFFKKDYTK-YELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYY 127

Query: 251 ESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHL 302
           ++ +      ++      +  I       A    EK+ K   HP        + ++Y + 
Sbjct: 128 QATQFAPVTFVLPHYGLGQMYIYGGDMENAAQCFEKVLKA--HPGNYEAMKILGSLYANS 185

Query: 303 LSENTVGKLK-RALRLEEINKESVESLVIVSKI 334
            ++      K    ++ E   + VE+ + +++I
Sbjct: 186 KNQQKRDIAKSHLKKVTEHFPDDVEAWIELAQI 218


>gi|330821872|ref|YP_004350734.1| Cellulose synthase operon C-like protein [Burkholderia gladioli
           BSR3]
 gi|327373867|gb|AEA65222.1| Cellulose synthase operon C-like protein [Burkholderia gladioli
           BSR3]
          Length = 1638

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 97/317 (30%), Gaps = 34/317 (10%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-----VYLLEVQIALAERQYNIAH 140
           +A+  G  ++  +++  AR   + V        + L     V L +     A      A 
Sbjct: 292 RAIGDGFAALDRNDLATARARFNAVLAGAPNDTDALGGLGIVELKQEHFREARNDLERAS 351

Query: 141 EKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
              +      A +        S    +   GD+  A+     A+   P  P     + + 
Sbjct: 352 RGGDPSRWREALKSAGYWSDTSDALVAQNRGDVAKAKSLFEHAIATDPSEPAAQLMLGEL 411

Query: 198 YVLAKEWSRAITFLN---QKKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIES 252
            +   +   A        +++ +  +  R    A+    R  E     D + +   A ++
Sbjct: 412 LLANHDPRGAEQAYRMALRRQADNPDAIRGLVGALAAQGRGDEALQFADQLTAEQQA-KA 470

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENT 307
             L      A    A++  +Q    +A  + E     +P  P    ++A IY  +     
Sbjct: 471 GGLDRLRGTAEAAQARAAEAQGDLGRARSLFEDALVGSPDDPWLRLDLARIY--VRQGAV 528

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
                    L   + +  ++L   + +A +            +  ++AP +     + ++
Sbjct: 529 ASARSMMDGLLAAHPDMPDALYAGALLAEQTHDYG---DGLRMLDRVAPAQRTAA-MGEL 584

Query: 368 EQANSHNTDKILYWTQS 384
           ++           W   
Sbjct: 585 QR---------RLWLAQ 592


>gi|320581017|gb|EFW95239.1| Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) [Pichia
           angusta DL-1]
          Length = 618

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 22/246 (8%)

Query: 135 QYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
            Y  A      + Q+  TR          ++ L+ E     DL+     + +  +IS D+
Sbjct: 338 NYEEAENYFIKLRQLDRTRIEEMEYYSTLLWHLHKEM----DLS---FLSHELHEISKDS 390

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P    AV   + L +E   AI    +  +  K +    A     +  E         +  
Sbjct: 391 PEAWIAVGNLFSLNREPDEAIKCFQKANQVDKNF----AYSYTLQGHEYLSNDAFENALE 446

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
               ++ L      A        +     RKAE    K  ++NP   I      ++ E  
Sbjct: 447 CFRHAILLDKRHYNAFYGIGMVYLKLGDFRKAEFHFRKAVEINPVNVILICCVGMVLEKL 506

Query: 308 VGKLKRALRLEEINKESVESLVIV---SKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
             K +   +    ++    S++ +   ++  + +   D A         +AP    +  L
Sbjct: 507 GKKEQALRQYIFASRLQPLSMLALFKKAQALISLKRYDLALKDFEKLENLAPDEASVHFL 566

Query: 364 LAQIEQ 369
           L ++ +
Sbjct: 567 LGKLYR 572


>gi|298715161|emb|CBJ27849.1| NB-ARC and TPR repeat-containig protein [Ectocarpus siliculosus]
          Length = 1251

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 101/313 (32%), Gaps = 48/313 (15%)

Query: 110  VSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPATREFA------VYSLY 161
            V +     +  L  +L  + AL   +  Y+ A    E    I   +           SL 
Sbjct: 848  VEKTLGVDHPNLAQMLNSRAALLDRQGMYDEAGPLYERSQAIRE-KALGPEHPDVARSLN 906

Query: 162  FES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW----------SRAI 208
              +   CR G    A+    +A+ I   A    +  V   +  + W          +  +
Sbjct: 907  KRAWLLCRQGKHEQAEPLNERAISIWEGALESEQPRVAPGLEMRAWVLRAQGKHAEAETL 966

Query: 209  TFLNQK--KKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAI----ESLKLCDNS 259
            + L+Q   +K     + + A+ L  R+ E   +G    +      AI    ++ +     
Sbjct: 967  SELSQAMHQKALGPEHSDVALSLSNRADELYRQGKDTEAQPLFERAIKIWEKAHRHDHPL 1026

Query: 260  IMASIC-AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
            +   +   A  L +Q K  KA  +LE+   +            +   +T+  L     L 
Sbjct: 1027 VANVLHNRAGLLSAQGKYAKAHALLERALAIR------EGALGVDHPDTITSLGALADLY 1080

Query: 319  EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
                       ++ K    +  +  A  +A    +  P     L +  +  ++     + 
Sbjct: 1081 AKQG-------LLEKATPVLEEVVSARERAQG--RDHPDVASALSMWAVVLSDQGKNAEA 1131

Query: 379  LYWTQSALHAMPD 391
            L   + AL A+ +
Sbjct: 1132 LALFEKAL-AIRE 1143



 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 26/159 (16%)

Query: 166  RIGDLNSAQRYATKALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              G    A     +AL I         PD      A+   Y       +A   L +    
Sbjct: 1040 AQGKYAKAHALLERALAIREGALGVDHPDTITSLGALADLYAKQGLLEKATPVLEEVVSA 1099

Query: 218  AKEWNRNR----AILLIARSLENADKGDMIASYHDAIESLKLC--------DNSIMASIC 265
             +          A  L   ++  +D+G    +     ++L +          ++I +   
Sbjct: 1100 RERAQGRDHPDVASALSMWAVVLSDQGKNAEALALFEKALAIREGALGVDHPDTITSLGA 1159

Query: 266  AAKSLISQNKKRKAEVILEKIWKVNP------HPEIANI 298
             A     Q    KA  +LE++           HP++A+ 
Sbjct: 1160 LADLYTKQGLLDKASRLLEEVVNARERIQGSDHPDVASA 1198



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 37/184 (20%)

Query: 163  ESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            E  R G    AQ    +A+ I         P    V            ++++A   L + 
Sbjct: 995  ELYRQGKDTEAQPLFERAIKIWEKAHRHDHPLVANVLHNRAGLLSAQGKYAKAHALLERA 1054

Query: 215  KK---------NAKEWNRNRAILLIARSLENADKGDMI-----ASYHDAIESLKLCDNSI 260
                       +        A+  +       +K   +     ++   A    +   +  
Sbjct: 1055 LAIREGALGVDHPDTITSLGALADLYAKQGLLEKATPVLEEVVSARERAQ--GRDHPDVA 1112

Query: 261  MASICAAKSLISQNKKRKAEVILEKIWKVNP------HPE-------IANIYTHLLSENT 307
             A    A  L  Q K  +A  + EK   +        HP+       +A++YT     + 
Sbjct: 1113 SALSMWAVVLSDQGKNAEALALFEKALAIREGALGVDHPDTITSLGALADLYTKQGLLDK 1172

Query: 308  VGKL 311
              +L
Sbjct: 1173 ASRL 1176


>gi|294339622|emb|CAZ87981.1| conserved hypothetical protein; putative Tetratricopeptide (TPR)
           repeat [Thiomonas sp. 3As]
          Length = 390

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 57/197 (28%), Gaps = 38/197 (19%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
                A ++H  +  +     E      L   Q        + A    E + +       
Sbjct: 87  GEYERAVRVHQNLLARADLPREARERAQLALAQDFFKAGLLDRAESAYEDLRRS------ 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQK 214
                               YA++AL           A++Q     ++W++AI      +
Sbjct: 141 -------------------VYASQAL----------TALLQISERTQDWNKAIARAGELE 171

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +    + R  A      ++++   G    +      +L+     +   +  A+      
Sbjct: 172 LRATGAYQRQIAQYWCELAVQHHAAGRAQEAQQSLDAALQAAPQGVRPRLLRAQWAQQHG 231

Query: 275 KKRKAEVILEKIWKVNP 291
           +   A  ILE I  V P
Sbjct: 232 ELESALRILESIDLVQP 248


>gi|262304941|gb|ACY45063.1| acetylglucosaminyl-transferase [Acanthocyclops vernalis]
          Length = 289

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 72/184 (39%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +          + +    N   +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVAESEECYNTALRLNP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++   P  A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNXASILQQQGKLNEALMHYKEAIRIQ--PAFAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ +  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMHDIQGALQCYTRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187



 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 4/106 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G LN A  +  +A+ I P        +        +   A+    +  +    +   
Sbjct: 99  QQQGKLNEALMHYKEAIRIQPAFADAYSNMGNTLKEMHDIQGALQCYTRAIQINPAF--- 155

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            A      +  + D G++  +      +LKL  N   A    A  L
Sbjct: 156 -ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPNFPDAYCNLAHCL 200


>gi|171185132|ref|YP_001794051.1| peptidase M1 membrane alanine aminopeptidase [Thermoproteus
           neutrophilus V24Sta]
 gi|170934344|gb|ACB39605.1| Peptidase M1 membrane alanine aminopeptidase [Thermoproteus
           neutrophilus V24Sta]
          Length = 824

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 46/125 (36%), Gaps = 7/125 (5%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +++E   +     +     ++  L D     +  AA++L           ++E  W+   
Sbjct: 554 QAVEALKRNGSPKAVEALAKA--LGDGFWGVAAEAARALGEIGTGEAVYKLIEGYWRAR- 610

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG--SIDQAHAKAM 349
           HP +       L      + + A  L+++   + ES  + ++ A  +G    + A     
Sbjct: 611 HPRVRRAIVEALG--NARRKEAAEFLDKVLHSAEESYYVRAEAARALGRIRWEYAEHSLR 668

Query: 350 LAMKI 354
            A++ 
Sbjct: 669 KALEY 673


>gi|72382577|ref|YP_291932.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002427|gb|AAZ58229.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 323

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 7/135 (5%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            ++   +      +    I+S     ++  +    +  L SQ K  +A+  +EK   + P
Sbjct: 75  YAILCKESLRENEALDLLIKSTDRYPDNPESHAIISDILRSQGKLEEAQFSIEKAINIKP 134

Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                H  +  I+  L   +    +    +   IN   +E+ + +  + +++ +  +A +
Sbjct: 135 DVADYHFNLGLIFIGLRILSKA--IMSLQKAILINPNLIEAYLNLCSVHMDLSNFSEAES 192

Query: 347 KAMLAMKIAPRKEIF 361
               A+K+ P   I 
Sbjct: 193 SIKKAIKLDPNSSIA 207


>gi|189346371|ref|YP_001942900.1| hypothetical protein Clim_0842 [Chlorobium limicola DSM 245]
 gi|189340518|gb|ACD89921.1| TPR repeat-containing protein [Chlorobium limicola DSM 245]
          Length = 201

 Score = 43.4 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 47/134 (35%), Gaps = 13/134 (9%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           S+A+  L++   N     R  A    AR++      +   +  D + ++ L  + + A  
Sbjct: 37  SQALELLDRMLDNG----RRDAQAYYARAVAYLSMNNYRKAGCDFLRTIALDPDFLEAYK 92

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL-LSENTVGKLKRALRLE 318
                 ++  ++  A   L+   + +P        + ++Y  +   E          +  
Sbjct: 93  HLGFIQLTLGREEAALKTLKNALEKDPAHSGLYCVLGDVYLDIGEPEKAKD---AFEKAF 149

Query: 319 EINKESVESLVIVS 332
           E+  E  E    ++
Sbjct: 150 ELAPEDAEPHCKLA 163


>gi|222054793|ref|YP_002537155.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221564082|gb|ACM20054.1| TPR repeat-containing protein [Geobacter sp. FRC-32]
          Length = 492

 Score = 43.4 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 59/189 (31%), Gaps = 16/189 (8%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A E L    +   T     Y L     + G+L  A      +L + P        +++
Sbjct: 37  EEAQEILAAAQKEQPTSSAVAYHLGLALKQTGNLEQAVANLKMSLKLEPMVSDAYPELIE 96

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              L  +++ A  F+   +    +  R    +   +    A   +   +    I++ ++ 
Sbjct: 97  LLYLQNDFAEAGKFIAMAESAGVKPAR----VAFLKGQVLAGNDNSEGAVAALIKAKEID 152

Query: 257 DNSI-MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                 A    A+  + Q  + KA+  L+ +   +P  E+A                   
Sbjct: 153 PALAQQADFQIAQIYLKQGDRDKAQESLKSVISGDPSSELAGFAREYE-----------R 201

Query: 316 RLEEINKES 324
           RL      +
Sbjct: 202 RLTAAAPRN 210


>gi|145641115|ref|ZP_01796696.1| hypothetical protein CGSHiR3021_08596 [Haemophilus influenzae
           R3021]
 gi|145274276|gb|EDK14141.1| hypothetical protein CGSHiR3021_08596 [Haemophilus influenzae
           22.4-21]
          Length = 240

 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 15/187 (8%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y   KEW +A+    +  K   + N            ++ +    +       ++L + 
Sbjct: 2   IYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVS 61

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVG 309
              + AS+  A   +   + ++A  ILE + + NP        P + + Y  L   +   
Sbjct: 62  PTCVRASLLLANLAMLDGQYQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFE 120

Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-Q 366
             L RA ++      + E  + + K+  E      A AK    +   P   IF   +  Q
Sbjct: 121 LFLIRAGQII----NNDEVELALVKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQ 176

Query: 367 IEQANSH 373
           I+ A   
Sbjct: 177 IDDAEDG 183


>gi|312129427|ref|YP_003996767.1| hypothetical protein Lbys_0652 [Leadbetterella byssophila DSM
           17132]
 gi|311905973|gb|ADQ16414.1| hypothetical protein Lbys_0652 [Leadbetterella byssophila DSM
           17132]
          Length = 274

 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            DL  A  +A KA++  PDA WVT    +      +   A+         AK  +    +
Sbjct: 204 KDLKKALEWANKAVEQQPDAFWVTHTKAKIQAKLGDKKGAMETAKLSLSQAKAASNQDYV 263

Query: 228 LLIARSLENA 237
            L  + +   
Sbjct: 264 ALNEKLMATL 273


>gi|158517929|ref|NP_001103483.1| transmembrane and TPR repeat-containing protein 3 isoform 1 [Mus
           musculus]
 gi|148689709|gb|EDL21656.1| mCG142017, isoform CRA_a [Mus musculus]
 gi|148689711|gb|EDL21658.1| mCG142017, isoform CRA_a [Mus musculus]
          Length = 920

 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195
            A E     L++        Y+L      + + N A +   +AL+++P         A++
Sbjct: 586 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 645

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            Q        +      ++  N        A       +   D      +     +++KL
Sbjct: 646 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 702

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285
             +   A    A       K+ KA  ILE+
Sbjct: 703 QPDFRSALFNLALLYSQTAKELKALPILEE 732



 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           A  I+P+   V   +             A     Q      ++ +      I+R      
Sbjct: 525 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 580

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
               + +    +++L+L  N+       A   I   +  +A     +  ++NP  ++A  
Sbjct: 581 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 640

Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
               L+ E+   KL     KR L       +       +  +A++     +A +    A+
Sbjct: 641 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 700

Query: 353 KIAPRKEIFL 362
           K+ P     L
Sbjct: 701 KLQPDFRSAL 710


>gi|145356787|ref|XP_001422607.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582850|gb|ABP00924.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 847

 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 86/258 (33%), Gaps = 52/258 (20%)

Query: 160 LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           L     R   GD+  A+     A D +PD+  +  A  +      E  RA   L + ++ 
Sbjct: 565 LMGAKERWLSGDVTRAREILQSAFDANPDSEEIWLAAFKLEFENGEIDRARMLLAKARER 624

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +  R    + +  +L   + GD  A      E                   I      
Sbjct: 625 LADCAR----VWMKSALVEREAGDEQAERKLLDEG------------------IENGNAS 662

Query: 278 KAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVSK 333
           KA +ILE     NP   H  +A     +  E   G ++ A   +    +E   S +++++
Sbjct: 663 KARIILETARAKNPSNEHLWLAA----VRQERESGNIQLAESTIARALQECPTSGLLLAE 718

Query: 334 IALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNT--DKILYWTQSALHA 388
            ++      Q  +K++ A++     P      ++A I      +   DK   W   A+  
Sbjct: 719 -SVRFAPRPQRKSKSVDALRRCDNDPY-----IIAAIAILFWADRKLDKARSWWNRAVTI 772

Query: 389 MPDPLWISDDGYLSSVWL 406
            PD         +   W 
Sbjct: 773 APD---------IGDHWA 781


>gi|134035048|sp|Q8BRH0|TMTC3_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 3
          Length = 920

 Score = 43.4 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195
            A E     L++        Y+L      + + N A +   +AL+++P         A++
Sbjct: 586 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 645

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            Q        +      ++  N        A       +   D      +     +++KL
Sbjct: 646 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 702

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285
             +   A    A       K+ KA  ILE+
Sbjct: 703 QPDFRSALFNLALLYSQTAKELKALPILEE 732



 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           A  I+P+   V   +             A     Q      ++ +      I+R      
Sbjct: 525 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 580

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
               + +    +++L+L  N+       A   I   +  +A     +  ++NP  ++A  
Sbjct: 581 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 640

Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
               L+ E+   KL     KR L       +       +  +A++     +A +    A+
Sbjct: 641 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 700

Query: 353 KIAPRKEIFL 362
           K+ P     L
Sbjct: 701 KLQPDFRSAL 710


>gi|332994520|gb|AEF04575.1| hypothetical protein ambt_15325 [Alteromonas sp. SN2]
          Length = 925

 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                   A    E +L         + +L F S + G+L+ A+  A KA+ + P+    
Sbjct: 788 QIASDKQTAIATYETILTKTPDNFVVLNNLAFLSFQNGNLDKAETMAKKAVSLQPENADS 847

Query: 191 TEAVVQQYVLAKEWSRAITF 210
            + + Q  +   +   A+  
Sbjct: 848 VDTLAQILIAKGDKEAALKL 867


>gi|327541384|gb|EGF27924.1| protein containing ASPIC/UnbV domain [Rhodopirellula baltica WH47]
          Length = 1041

 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 27/268 (10%), Positives = 80/268 (29%), Gaps = 39/268 (14%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---I 149
           M+I + + P A                           +A+ +     E ++  ++    
Sbjct: 118 MAIGSADAPSADLFEK-----------------TGHAYMAQGRTFDTIELMKRCVRLHPD 160

Query: 150 PATREFAVYSLYF-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            A R  ++  L   ++     +   +    +      +    +++  +     +   +A+
Sbjct: 161 DAGRRVSLIGLMISQALERDAVVHLRYLIQRGQAGISELVIASDSS-RPQADEQMCKQAL 219

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                  +      R  A     R  E  ++   +   H          + + A     +
Sbjct: 220 KLNPSDLRPQYAMTRFDAYNH--RWSEVLEQLKPVVDRH---------PDFVPAWAFLTR 268

Query: 269 SLISQNKKRKAEVI----LEKIWKVNPHPEIAN-IYTHLLSENTVGKLKRALRLEEINKE 323
           + + +N     E I        ++ +P   IA  ++     + ++  +        ++  
Sbjct: 269 AAVEENDIETLERITNRDFADEYESHPQVWIARGVWADQNGDTSLA-VASFAEAVRLDPN 327

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+L  ++      G ++ +   A+ A
Sbjct: 328 HHEALTKLTTALAASGDLELSQRAAVRA 355


>gi|312881061|ref|ZP_07740861.1| TPR repeat-containing protein [Aminomonas paucivorans DSM 12260]
 gi|310784352|gb|EFQ24750.1| TPR repeat-containing protein [Aminomonas paucivorans DSM 12260]
          Length = 439

 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 38/195 (19%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A+ ++ A+    +  K   E  R   +  I   LE+   G    +       L+     
Sbjct: 90  EARRYAPALKLFRKVLKERPE--RKDTLFQIGVCLESL--GRPGEALDAFASHLENQPRD 145

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
             A I   + L+S  +   A   LEK                                  
Sbjct: 146 EGAWIRTGRILLSLGRPESALDPLEKA-------------------------------VR 174

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDK 377
           +  ++ E+  ++ ++   +GS D+A     LA+   P + +  LL  A+         + 
Sbjct: 175 LAPKNPETQRLLGEVYRRLGSRDRAVEHLSLALTWNPDQ-VDTLLRDAKALMGLKAYGEA 233

Query: 378 ILYWTQSALHAMPDP 392
           +  + ++A  A  DP
Sbjct: 234 LRGYRKAAELAPEDP 248


>gi|301308217|ref|ZP_07214171.1| TPR-domain containing protein [Bacteroides sp. 20_3]
 gi|300833687|gb|EFK64303.1| TPR-domain containing protein [Bacteroides sp. 20_3]
          Length = 999

 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 93  MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147
           ++ A  ++  A+++ S V  S    F  E      + +I   ++ Y  A E  +    + 
Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL---DISPDA-PWVTEAVVQQYVLAKE 203
           + P  +E A   L   +   G    A   A   L    +SP+          + Y+  K+
Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEALLAANDLLKEPKLSPEIMSEARYVRAKAYISLKQ 891

Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LCD 257
            ++A+  L +  K+ +  +   A  LL     +N D  +      + IE+       L  
Sbjct: 892 ENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLAR 951

Query: 258 NSIMASICAAKSLISQNKKRKAEVIL 283
             I      A   I Q    +A   L
Sbjct: 952 GFI----LLADIYIRQGDDFQARQYL 973


>gi|317050410|ref|YP_004111526.1| hypothetical protein Selin_0213 [Desulfurispirillum indicum S5]
 gi|316945494|gb|ADU64970.1| hypothetical protein Selin_0213 [Desulfurispirillum indicum S5]
          Length = 451

 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +LE  +  NP  +       L S +         RL  +  +++ + + +++  +E+   
Sbjct: 61  LLEYEFAGNPAYDALFGLAALRSGDPARASWALERLVLVEPDNLNAKLALARAYMELNRF 120

Query: 342 DQAHAKAMLAMKIAPRKEIF----LLLAQIEQ 369
           ++A        ++ P   I      L A++E+
Sbjct: 121 NRAQGLLDEVRQMQPAARILQAAEQLQAELEE 152


>gi|282902039|ref|ZP_06309937.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193126|gb|EFA68125.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 267

 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 14/145 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------ 176
            +L  Q          A +    +LQ       ++  L            A ++      
Sbjct: 113 KVLLAQATQQIGNTQEASQIYRSILQTQPGNIQSLQGLVKLELDQKRPEVAIQFLKETIS 172

Query: 177 -ATKALDISPDAPW--VTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
            A K+  + P +      + ++ + Y   K   +AI+   +  K   +  R     ++A+
Sbjct: 173 NAEKSNSVQPGSFDIIAIQLLLGRVYSSQKNPDQAISLYEEVMKQYPQDFRP----VLAK 228

Query: 233 SLENADKGDMIASYHDAIESLKLCD 257
           ++   ++G +  +      +L L  
Sbjct: 229 AILLKEQGKINEAKPLFDSALTLAP 253


>gi|146343033|ref|YP_001208081.1| putative adenylate cyclase [Bradyrhizobium sp. ORS278]
 gi|146195839|emb|CAL79866.1| putative Adenylate cyclase [Bradyrhizobium sp. ORS278]
          Length = 602

 Score = 43.4 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 94/313 (30%), Gaps = 28/313 (8%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L++        A +    +       ++    L    I         A   +  M     
Sbjct: 275 LVAPENGEQLWAGRYDRDIGDLFAVQDDITANLCTALIPEIY--RAEAAVPVRSMTTDLT 332

Query: 152 T--REFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVT----EAVVQ------Q 197
              R   +  L  Y++  +  D  S+     +A+ I P            ++Q       
Sbjct: 333 AWDRF--LRGLSHYYQPTKA-DYESSIALFREAIKIDPGLAIAHTYLGTILLQGIHFGWI 389

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               + W  A+T      +     + + ++L    +++    G + A    A ++L+L  
Sbjct: 390 RNSRELWDEAMTLAEASVRLDPRSSFSYSLLAYVHAMQ----GRVEAGIDGARKALQLNP 445

Query: 258 NSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHP----EIANIYTHLLSENTVGKLK 312
             + A        +   + R+A  +      + N  P     + + ++H +       L 
Sbjct: 446 YDMGARGVLGVCHLVGGEHREAIELFSVAAQRGNSDPRYQWSVLSAFSHYMLGQYDASLS 505

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
            A      N   ++ L I +    ++G   +A       +   P   I  LL+ I   N 
Sbjct: 506 WARESHYQNPNHLQCLAIRAAALAQLGRSVEAGEAVAALLSQHPWMTIERLLSNIRWRNP 565

Query: 373 HNTDKILYWTQSA 385
            +          A
Sbjct: 566 ADIAHYRDGLAKA 578


>gi|288556107|ref|YP_003428042.1| hypothetical protein BpOF4_15505 [Bacillus pseudofirmus OF4]
 gi|288547267|gb|ADC51150.1| hypothetical protein BpOF4_15505 [Bacillus pseudofirmus OF4]
          Length = 419

 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 26/186 (13%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKK 215
           Y L       GD N +  +  KA+  + + P   V   + + Y  + ++  A+ +  +  
Sbjct: 138 YGLGEFYLERGDYNKSIPHLKKAVHRAEELPNIEVDLKMAEAYSASGQFEEALVYYEKGL 197

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQN 274
           K+           L          GDM  +    +E+LK L  +        AK+L ++N
Sbjct: 198 KD-----HLEPHALFGYGFTAYQVGDMTLAIEQ-LEALKALDPDFSSLYPYLAKALEAEN 251

Query: 275 KKRKAEVILEKIWKV-----------------NPHPEIANIYTHLLSENTVGKLKRALRL 317
           +  +A  IL+    V                   HP+   +Y   +       L+    L
Sbjct: 252 RLEEAMDILKDGMSVDEYNEELYIMAGKLSFKRQHPDEGELYLRKVIALNPSNLEAVQTL 311

Query: 318 EEINKE 323
               K 
Sbjct: 312 AAYLKH 317


>gi|255601698|ref|XP_002537729.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
 gi|223515289|gb|EEF24654.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
          Length = 421

 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 78/261 (29%), Gaps = 45/261 (17%)

Query: 110 VSQQHTFHNEYL------VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
              +    +  L        L   Q A  E+    A         I  T       +   
Sbjct: 130 ARARANLKDPGLKTLVGIALLQTGQTAEGEKLVTEARTAHPENSLIQGT-------IARY 182

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WN 222
                  + A      A+   PDA  ++  ++  Y  A +  +A+    Q+ K +     
Sbjct: 183 YLLSAQTDRAIETLQAAIKAKPDAS-LSRLLIAAYAGAGKADQALGVAQQQAKESPAKAE 241

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               +   A  L+  D+ +          +LK       A +  A+  I + +  KA  +
Sbjct: 242 SWWLLGRTALQLQQLDQAEPALQ-----NALKQDPAFQPAQLDLAQVYIRRKQPEKAAAV 296

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL---RLEEINKESVESLVI------VSK 333
            + + + N               + +  LK       ++  N  ++ES ++       ++
Sbjct: 297 YKAVLQKN--------------NDAIAALKGMTVVFAMQGANPSAIESQLLSLSKSDSAR 342

Query: 334 IALEMGSIDQAHAKAMLAMKI 354
             L  G       +   A ++
Sbjct: 343 AVL--GEFYLRRQQFEDADRL 361



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 68/229 (29%), Gaps = 13/229 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             + + A   L+ +           +  +   +    DL  A  Y +  +D    +    
Sbjct: 51  AGKLDEAEAILQEVYNESHNESVGALIGMIRYA--RNDLKGAAEYLSSNVDPEVASDSAM 108

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A+    +   +  + +   + + +     N     L     +     G          E
Sbjct: 109 TALAATQLRLSQPEKLLEIFDARAR----ANLKDPGLKTLVGIALLQTGQTAEGEKLVTE 164

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENT 307
           +      + +     A+  +   +  +A   L+   K  P       +   Y        
Sbjct: 165 ARTAHPENSLIQGTIARYYLLSAQTDRAIETLQAAIKAKPDASLSRLLIAAYAGA--GKA 222

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              L  A +  + +    ES  ++ + AL++  +DQA      A+K  P
Sbjct: 223 DQALGVAQQQAKESPAKAESWWLLGRTALQLQQLDQAEPALQNALKQDP 271


>gi|254428325|ref|ZP_05042032.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
 gi|196194494|gb|EDX89453.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
          Length = 566

 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 62/219 (28%), Gaps = 38/219 (17%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMM-------LQIPATREFAVYSLYFESCRI--- 167
               ++L   Q A  +   + A +    +        ++ A R         ++  +   
Sbjct: 314 RPDDIHLYLAQAAEQKMDTDSAIDHYLKVGGPQAIRARVQAARLLYQQGNAGQAHALMQD 373

Query: 168 -----------------------GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
                                  GD   A      AL   PD       ++    +  E 
Sbjct: 374 LAQQQPELQDSLTITEAEMRSSNGDPQGAIALINDALRDQPDNTE----LLYSRAMTAEK 429

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM-IASYHDAIESLKLCDNSIMAS 263
              +  L +  K     N + A  L A      ++ D    +Y     +L+L  +     
Sbjct: 430 VGDLAQLEKDLKRIITLNPDDASALNALGYTLGNRTDRLDEAYQYVSRALELRPDDPAIL 489

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                 L  + +   A   L + ++  P PE+A  Y  +
Sbjct: 490 DSMGWVLYQRGEPEAARDYLRRAYEKFPDPEVAAHYGEV 528



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 84/276 (30%), Gaps = 45/276 (16%)

Query: 86  KALYTGLMS-IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + L   L++ +AA    L   +  Y     +  +  ++     Q A          + L 
Sbjct: 44  ETLSDLLVAEVAAQRQSLGVTLGYYSRAAESTRDPAVI----SQAARLAHYLEDPQQALA 99

Query: 145 M----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           M    +   P + +    ++  E  R+G+ ++A R+  + L             +     
Sbjct: 100 MSELWLDTTPDSEDALQVAILSE-IRLGNTSAATRHLDQLLS---AHGEDALGRLVNQAR 155

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +    +  +    +    +    A L  AR+L    +     +      +LKL     
Sbjct: 156 GLDEQGNLQLVEALAQLTDSYPDQ-APLWYARALWLEHEKQPEPALDATERTLKLMPRHE 214

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
            A +  A+ L    + +KA                               L+   +L   
Sbjct: 215 DALLLKAQLLYETGEPQKA-------------------------------LRHLKKLVRK 243

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             ++    +   ++ L  G +++A  +  +  +  P
Sbjct: 244 YPQARRPRIAYVRMLLATGQLEEAGEQLTIMAEQNP 279


>gi|195489044|ref|XP_002092570.1| GE14267 [Drosophila yakuba]
 gi|194178671|gb|EDW92282.1| GE14267 [Drosophila yakuba]
          Length = 940

 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 89/275 (32%), Gaps = 32/275 (11%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           L+  +   A      +L+       A+      +    D   A  Y    L I P  P  
Sbjct: 103 LSSSRAQDADALFIRVLRKQRRNILALIGRACLAYNRQDYIGALGYFKSVLMIQPQGP-- 160

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               V   V      R +  L + +   + A E+N      ++  +L   ++ +      
Sbjct: 161 ----VDVRVGIGHCFRMMGELEKARMSFQMALEYNAQCQNAMLGLALIKLNQREEQTYQE 216

Query: 248 ------DAIESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKVNPHPEIAN 297
                  A +  K   + +      A         +     A   L          E  N
Sbjct: 217 GKLLLAAAFDLNKHNPDVLS---ILASLYYLDGNHKMVWCLAGNALRSTDSKQM--ESLN 271

Query: 298 IYTHLLSENTVGKLKRALRLEEINKE-SVESLVI----VSKIALEMGSIDQAHAKAMLAM 352
            +    S +  G+ + A +   ++ + + E  V+    ++++ L  G + +A A     +
Sbjct: 272 YFQIAKSYHATGQFESAKKFYVLSVKVAPEGYVLPYVGMAQMYLNEGELHRAKACLEAFL 331

Query: 353 KIAPRKEIFL-LLAQI--EQANSHNTDKILYWTQS 384
           K  P + + + LLA+I  E+ +    +K +     
Sbjct: 332 KYEPDEPVVMGLLAKIYLEERSPGQIEKAIEMLVK 366


>gi|32475697|ref|NP_868691.1| hypothetical protein RB9073 [Rhodopirellula baltica SH 1]
 gi|32446239|emb|CAD76068.1| conserved hypothetical protein containing TPR domain
           [Rhodopirellula baltica SH 1]
          Length = 1041

 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 27/268 (10%), Positives = 80/268 (29%), Gaps = 39/268 (14%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---I 149
           M+I + + P A                           +A+ +     E ++  ++    
Sbjct: 118 MAIGSADAPSADLFEK-----------------TGHAYMAQGRTFDTIELMKRCVRLHPD 160

Query: 150 PATREFAVYSLYF-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            A R  ++  L   ++     +   +    +      +    +++  +     +   +A+
Sbjct: 161 DAGRRVSLIGLMISQALERDAVVHLRYLIQRGQAGISELVIASDSS-RPQADEQMCKQAL 219

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                  +      R  A     R  E  ++   +   H          + + A     +
Sbjct: 220 KLNPSDLRPQYAMTRFDAYNH--RWSEVLEQLKPVVDRH---------PDFVPAWAFLTR 268

Query: 269 SLISQNKKRKAEVI----LEKIWKVNPHPEIAN-IYTHLLSENTVGKLKRALRLEEINKE 323
           + + +N     E I        ++ +P   IA  ++     + ++  +        ++  
Sbjct: 269 AAVEENDIETLERITNRDFADEYESHPQVWIARGVWADQNGDTSLA-VASFAEAVRLDPN 327

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+L  ++      G ++ +   A+ A
Sbjct: 328 HHEALTKLTTALAASGDLELSQRAAVRA 355


>gi|113478271|ref|YP_724332.1| hypothetical protein Tery_4945 [Trichodesmium erythraeum IMS101]
 gi|110169319|gb|ABG53859.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 750

 Score = 43.4 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 7/135 (5%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            LI ++     +G    +     + L L  N   A +  A  L +Q K  +A  +  +  
Sbjct: 17  TLIQQAELYYTQGQFSEAMGCCRQVLTLQPNWAPAYVTLANILQAQGKVSEAISVYYRAI 76

Query: 288 KVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           + N  P+++  Y +L             +    +  ++  E   +   ++K+   +G  D
Sbjct: 77  EFN--PDLSQAYINLGTMFYRQGKLEEAIANYYKAIQLQPEMAAAYWNLAKVWEHLGKSD 134

Query: 343 QAHAKAMLAMKIAPR 357
           QA A    A+++ P 
Sbjct: 135 QAIASQQKALELNPS 149


>gi|262304995|gb|ACY45090.1| acetylglucosaminyl-transferase [Hadrurus arizonensis]
          Length = 288

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 6/168 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   ++   +    H + L  L    I   +     A       L +      A  +L  
Sbjct: 39  AEDCYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPEFAAAHSNLAS 96

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              + G LN A  +  +A+ ISP        +        +   A+    +  +    + 
Sbjct: 97  VLQQQGKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAF- 155

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 11/158 (6%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL + P        +            A     +      E+    A      +     +
Sbjct: 46  ALRLCPTHADSLNNLANIKREQGFIEEATRLYLKALDVFPEF----AAAHSNLASVLQQQ 101

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
           G +  +     E++++      A      +L      + A     +  ++NP     H  
Sbjct: 102 GKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSN 161

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197


>gi|256838989|ref|ZP_05544499.1| TPR-domain-containing protein [Parabacteroides sp. D13]
 gi|298374536|ref|ZP_06984494.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
 gi|256739908|gb|EEU53232.1| TPR-domain-containing protein [Parabacteroides sp. D13]
 gi|298268904|gb|EFI10559.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
          Length = 999

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 93  MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147
           ++ A  ++  A+++ S V  S    F  E      + +I   ++ Y  A E  +    + 
Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL---DISPDA-PWVTEAVVQQYVLAKE 203
           + P  +E A   L   +   G    A   A   L    +SP+          + Y+  K+
Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEALLAANDLLKEPKLSPEIMSEARYVRAKAYISLKQ 891

Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LCD 257
            ++A+  L +  K+ +  +   A  LL     +N D  +      + IE+       L  
Sbjct: 892 ENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLAR 951

Query: 258 NSIMASICAAKSLISQNKKRKAEVIL 283
             I      A   I Q    +A   L
Sbjct: 952 GFI----LLADIYIRQGDDFQARQYL 973


>gi|237755427|ref|ZP_04584053.1| putative TPR repeat-containing protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692427|gb|EEP61409.1| putative TPR repeat-containing protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 329

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 29/226 (12%)

Query: 158 YSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-----AIT 209
           Y L  ++       +   A     +A+ + P+ P V     +  V   + ++     AI 
Sbjct: 8   YHLLNKAIYHYENENFEMAITLLDEAILLDPEIPEVH--YWRGKVATHDLNQESLEVAIV 65

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L++  +   ++    A     R      KG+   +  D  ++++L      A    A+ 
Sbjct: 66  ELSEAIRLKPDY----ADAYFERGKVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQI 121

Query: 270 LISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEIN 321
            +      KA   LEK+     H E        +  I+ +         +++  +  E N
Sbjct: 122 ELISGNDEKAMKYLEKV----SHQEGDDRYYYSLGKIFYNAGKYQLA--IEQFNKTIEKN 175

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQ 366
           K  V++ V  +     +G+  +A      A+ + P +  + + +A+
Sbjct: 176 KYFVDAYVYKAHALANLGNYQEAIENLKKAIILVPEEISYFIDMAK 221



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
            +  +  ++     K+ ++ G  ++A      A+++ P+ KE + LLAQIE  + ++   
Sbjct: 72  RLKPDYADAYFERGKVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQIELISGNDEKA 131

Query: 378 ILY 380
           + Y
Sbjct: 132 MKY 134


>gi|255556376|ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus communis]
 gi|223541537|gb|EEF43086.1| pre-mRNA splicing factor, putative [Ricinus communis]
          Length = 648

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 80/268 (29%), Gaps = 20/268 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQ-IPATR 153
            NI  AR++ +   +     NEY+     LLE +      +Y  A        +  P + 
Sbjct: 273 GNIKKARQLLAKGIK-FCGGNEYIYQTLALLEAKA----NRYEQARYLFRQATKCNPKSC 327

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              +     E  +     +A+    KA+  SP   +                 A   L  
Sbjct: 328 ASWLAWAQVEVQQEN-NLTARELFQKAVQASPKNRFAWHVWGVFEANIGNIEMARKLL-- 384

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K     N    +LL + +L          +      + +L        I        +
Sbjct: 385 --KIGHTLNPRDPVLLQSLALLEYKHSTANLARVLFRRASELDPKHQPVWIAWGWMEWKE 442

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVES 327
                A  + ++   ++   E A          E  VG L  A RL      IN +S  +
Sbjct: 443 GNISAARELYQRALSIDSSSESAAKCLQAWGVLEQRVGNLSLARRLFRSSLNINSQSYIT 502

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +  ++   + G+  +A     L  +  
Sbjct: 503 WMTWAQFEEDQGNSVRAEEIRNLYFQQR 530



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 70/213 (32%), Gaps = 11/213 (5%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W   AV++  +      RA    +         ++         ++    +G++  +   
Sbjct: 228 WQCWAVLENKM--GNIRRARELFDAA----TVADKRHIAAWHGWAVLELKQGNIKKARQL 281

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSE 305
             + +K C  +       A      N+  +A  +  +  K NP      +A     +  E
Sbjct: 282 LAKGIKFCGGNEYIYQTLALLEAKANRYEQARYLFRQATKCNPKSCASWLAWAQVEVQQE 341

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           N +   +   +  + + ++  +  +       +G+I+ A     +   + PR  + L   
Sbjct: 342 NNLTARELFQKAVQASPKNRFAWHVWGVFEANIGNIEMARKLLKIGHTLNPRDPVLLQSL 401

Query: 366 QIEQANSHNTDKILYWTQSA--LHAMPDPLWIS 396
            + +      +      + A  L     P+WI+
Sbjct: 402 ALLEYKHSTANLARVLFRRASELDPKHQPVWIA 434


>gi|167561753|ref|ZP_02354669.1| TPR domain protein [Burkholderia oklahomensis EO147]
          Length = 280

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 6/138 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL      A  Q   +      +L  P         L   S   GD ++A +  T+
Sbjct: 83  PDTILLRADALRATDQAAASTVAYRQLLNTP-LAARGYRGLGLLSGASGDFDAASQALTQ 141

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++P        +    + + + + A   L +      E ++N   +L   +L     
Sbjct: 142 ATALAPTDSLTLSDLAYARMRSGDVAGARVPLMKA----AELDQNNPKILSNLALFLLAT 197

Query: 240 GDMIASYHDAIESLKLCD 257
           G    +    +  LKL  
Sbjct: 198 GQTRDALGL-MNQLKLAP 214


>gi|308810889|ref|XP_003082753.1| pentatricopeptide (ISS) [Ostreococcus tauri]
 gi|116061222|emb|CAL56610.1| pentatricopeptide (ISS) [Ostreococcus tauri]
          Length = 923

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 70/228 (30%), Gaps = 23/228 (10%)

Query: 133 ERQYNIAHEKLEM------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            + + +A E  ++      +   P    FA  +L   + + G+  +A+    +A      
Sbjct: 124 AKDWAVAREAFDLRRTEAGLAPDP----FAYSALVSSAAKCGNYVAAREAFEEANAAHAV 179

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              V  A +       ++  A   L + K  A      R+   +  +           + 
Sbjct: 180 DTVVYNAFIDACASRGDYEGARATLERMKTTANVKPNIRSYNGVISASTRRKHFSGALAA 239

Query: 247 HDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKV-------NPH--PEIA 296
            + ++  KL    I   ++ AA +         +E +     +        N H    + 
Sbjct: 240 WEELQLAKLAPTIITYGAMLAAGAATDDVDVAWSEELFADALQSGACGRAGNDHMVSSLI 299

Query: 297 NIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           + Y   +     +    L+RA  +  +  E   S    +K +      
Sbjct: 300 SAYARGVVRKQIDKKTALERAEAIVRLLSEDAASDDRRAKASPNARVW 347


>gi|325203945|gb|ADY99398.1| tetratricopeptide repeat protein [Neisseria meningitidis
           M01-240355]
          Length = 612

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 104/315 (33%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     ++ A       ++    L A +  A+  +
Sbjct: 301 NPNAD----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRD 356

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 357 YAKVRQWLKK-VSAP 370


>gi|302770493|ref|XP_002968665.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii]
 gi|300163170|gb|EFJ29781.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii]
          Length = 824

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 35/189 (18%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A  +  +A  + P      + +        E+  A   L +      ++    A   +  
Sbjct: 348 ACEHYREAAILHPPHYRALKLLGSGLYGVGEYRAAEKALGEAIFLKSDY--ADAHCDLGS 405

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            L     GD   +  +  +++ +  + + A       L    + ++A             
Sbjct: 406 VLHAL--GDDERAIVEFQKAIDIKPDHMDALYNLGGLLRDTGRFQRA------------- 450

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              A +Y+ +L                +N    ++ +  +   L  G  ++A      A 
Sbjct: 451 ---AEVYSRVL---------------SLNPSHWQAQLNRAVSLLGAGDTEEARKALKEAF 492

Query: 353 KIAPRKEIF 361
           K+  R E++
Sbjct: 493 KMTNRVELY 501



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 94/302 (31%), Gaps = 35/302 (11%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A    + R+    +  + + + + L  L   Q A A R  + A +    M          
Sbjct: 212 AGGDEVVRRTMHDLGTESSVYQKALGDL--RQKADASRTQDEAFDAHMAM---------- 259

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLN 212
             SL+           A     +A ++ P            +       +++  A     
Sbjct: 260 GRSLFDHKF----YEEALICFKRATELRPTDVRPHFRTGNTLYSL----EKFLEAREAYE 311

Query: 213 QKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
                A   N     L     +   +    +G ++ +     E+  L      A      
Sbjct: 312 LALDAANTGNPQWTNLVPQIHVNLGVALEGEGMLLNACEHYREAAILHPPHYRALKLLGS 371

Query: 269 SLISQNKKRKAEVIL-EKIWK----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
            L    + R AE  L E I+      + H ++ ++  H L ++    ++   +  +I  +
Sbjct: 372 GLYGVGEYRAAEKALGEAIFLKSDYADAHCDLGSV-LHALGDDERAIVE-FQKAIDIKPD 429

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
            +++L  +  +  + G   +A       + + P      L   +    + +T++     +
Sbjct: 430 HMDALYNLGGLLRDTGRFQRAAEVYSRVLSLNPSHWQAQLNRAVSLLGAGDTEEARKALK 489

Query: 384 SA 385
            A
Sbjct: 490 EA 491


>gi|170767254|ref|ZP_02901707.1| tetratricopeptide repeat protein [Escherichia albertii TW07627]
 gi|170123588|gb|EDS92519.1| tetratricopeptide repeat protein [Escherichia albertii TW07627]
          Length = 1068

 Score = 43.4 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 36/120 (30%), Gaps = 3/120 (2%)

Query: 101 PLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             A      + + H  +         L+       + QY  A E     +    ++    
Sbjct: 488 QAAAYASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGY 547

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y L   + R G++ +   +  ++L   P    V        +L+     A     +  ++
Sbjct: 548 YGLARLAVRDGNVEAGLDFCQQSLRACPTNQEVLCLHNLLLLLSGRRDNARLQREKLLRD 607


>gi|315042610|ref|XP_003170681.1| pre-mRNA-splicing factor clf1 [Arthroderma gypseum CBS 118893]
 gi|311344470|gb|EFR03673.1| pre-mRNA-splicing factor clf1 [Arthroderma gypseum CBS 118893]
          Length = 678

 Score = 43.4 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 80/242 (33%), Gaps = 24/242 (9%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183
           ++Y  A    +  L   P ++  A+ S Y    +  GD         +  +    + +  
Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237
           +P    +   + +    + +  R      +        +  + W R   + +     E  
Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRVRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376

Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +  D+  +     E LKL            +  A+  I Q     A   L +   + P  
Sbjct: 377 ENEDVERARQIYTECLKLIPHKKFTFAKLWLMKAQFEIRQLDLVLARKTLGQAIGMCPKD 436

Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           ++   Y ++     E +  + K   +  + N    ES +  +++   +  +++A A   L
Sbjct: 437 KLFRGYINIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 495

Query: 351 AM 352
            +
Sbjct: 496 GI 497


>gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 530

 Score = 43.4 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 22/277 (7%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMML 147
            G     +  +  A + +    +     +  LV +L+   Q+     Q+  A +  +   
Sbjct: 246 QGTALANSGKLSEAAESYQKALEL----DPNLVEILQPLGQVLTQLNQWEAAVDIFQKAT 301

Query: 148 QIPATREFAVYSLYFESCRIGDLN-SAQRYATKALDISPDAP----WVTEAVVQQYVLAK 202
           Q+      + Y    ++    D    A     +A ++ P +      + +A+ + Y    
Sbjct: 302 QVDP-NSASFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLY---- 356

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            WS AI    +        N+      +    +     D   + +   +S +   NS  +
Sbjct: 357 HWSEAIATYQKALYLNPP-NQAEIQTHLQEVQDKQRHLDEEIAAYS--DSHEFHPNSSES 413

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEE 319
               A+ L S+ K   A +   +   +NP   +A+    YT    +     +    +  E
Sbjct: 414 YEKFAQFLRSKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAE 473

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +N  S      + +  +E G +D+A A    ++ I P
Sbjct: 474 LNPYSPHVQYHLGEALVEEGRLDEAIAHFKQSITIDP 510



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 85/255 (33%), Gaps = 16/255 (6%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y +L   L ++       A   +    + +   +E L  L    +  ++ ++        
Sbjct: 175 YLSLGQTLEAL--GETEEAIASYRRSYELNPSLSEALPKLQT--VLESQGRWEELATLYR 230

Query: 145 MM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
              +  P +     Y     +       +A+ Y  KAL++ P+   + + + Q      +
Sbjct: 231 RCCIVDPNSATSHKYQGTALANSGKLSEAAESY-QKALELDPNLVEILQPLGQVLTQLNQ 289

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           W  A+    +  +   + N       + ++L   D+  ++ +      + +L   S    
Sbjct: 290 WEAAVDIFQKATQ--VDPNSASFYHQLGQALAKCDR--LLEALAAYKRASELHPTSTPVL 345

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLE 318
               ++L       +A    +K   +NP P  A I THL       +     +       
Sbjct: 346 FDLGQALTKLYHWSEAIATYQKALYLNP-PNQAEIQTHLQEVQDKQRHLDEEIAAYSDSH 404

Query: 319 EINKESVESLVIVSK 333
           E +  S ES    ++
Sbjct: 405 EFHPNSSESYEKFAQ 419



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 60/202 (29%), Gaps = 35/202 (17%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +  R G L+ A     +A+  SP + W    + +      +   AI       + A E 
Sbjct: 10  NQLLRKGQLDEAIASYNQAIAESPQSAWYYHNLGEALSQQGKIDEAI----AAYRQATEL 65

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N N A            +G++  +     ++++L  +        A  LI + +  +A  
Sbjct: 66  NPNSAWSYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLALVLIKEGRLEEAVS 125

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +L+K                                 E+  +  E    + K   +    
Sbjct: 126 LLQKA-------------------------------IELKADDAELYHSLGKAYQQQQQY 154

Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363
            +A       +++ P      L
Sbjct: 155 SEAVTAYRQGLELNPYWSDCYL 176


>gi|302340235|ref|YP_003805441.1| hypothetical protein Spirs_3761 [Spirochaeta smaragdinae DSM 11293]
 gi|301637420|gb|ADK82847.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 860

 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 82/264 (31%), Gaps = 18/264 (6%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            +  + +    ++     +E +IA  +  ++ A   L  +++         Y       R
Sbjct: 426 RAIAAIRRYAPDDPEALAIEGKIAFEDGNWDRAEALLRPLVERGCGDSAVYYLCALLDLR 485

Query: 167 IGDLNSAQRYATKALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             DL SA      AL + PD P      A +           A   L   ++N   WN  
Sbjct: 486 RNDLASAATLTDAALALEPDYPLYRFKRAEIGYLSGKGNEEEARRALELDRENGWNWN-- 543

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                    L   D+     +      + +L        I  +++L      + A   ++
Sbjct: 544 ------LLGLILLDERKDAEALDLFEHAKQLLPEEPEPIINYSEALFRLRGCKAAVSCID 597

Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +    P P++ N   ++LS     +        A R E  N    E+    +   L   
Sbjct: 598 DVLTRLPSPQLLNRKGNILSTSHRYDEAADAYLAAARDEPANPLWRENG---AAALLAAD 654

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363
            + +A       ++  P    + L
Sbjct: 655 RVPEAERILARLLEEEPTALRYRL 678



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 60/191 (31%), Gaps = 17/191 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G  +SA  +  + L+  PD             L       +  L+  +         
Sbjct: 294 LSLGFYDSALLHIERILEGDPDMEEALREKTAVLYLQGRIDELLELLDTMEAQKPLP--- 350

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            + LL  R    +  G    +      + +   +    ++ AA S     K  +A  +  
Sbjct: 351 -SALLNLRGNALSSLGRFDQAADLYRRAFEGDPSVSQFALNAAASFERSGKNTEALAMYR 409

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQ 343
           K                L  +    +L RA   +     +  E+L I  KIA E G+ D+
Sbjct: 410 KA------------AGELYRQQAWDELDRAIAAIRRYAPDDPEALAIEGKIAFEDGNWDR 457

Query: 344 AHAKAMLAMKI 354
           A A     ++ 
Sbjct: 458 AEALLRPLVER 468


>gi|295678098|ref|YP_003606622.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. CCGE1002]
 gi|295437941|gb|ADG17111.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. CCGE1002]
          Length = 1634

 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 7/134 (5%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A +      G +      A  +  L  +++ A    A +L    +  +AE    +  K 
Sbjct: 807 LALACALQRAGKLTEFASAAERAATLLPDTLSAQTLLADALKITRQFEQAERHCREALKR 866

Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           +P     H  +  +   +        +    R   +  ++  +   +    LE G   +A
Sbjct: 867 HPESAGLHHSLGVVLQSMGRH--ADSIACFRRAVALTPDNALAYDALGVALLEYGESKEA 924

Query: 345 HAKAMLAMKIAPRK 358
            +    A+++AP +
Sbjct: 925 ESALRRALELAPTQ 938


>gi|262304997|gb|ACY45091.1| acetylglucosaminyl-transferase [Heterometrus spinifer]
          Length = 290

 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 6/168 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   ++   +    H + L  L    I   +     A       L +      A  +L  
Sbjct: 39  AEDCYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPEFAAAHSNLAS 96

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              + G LN A  +  +A+ ISP        +        +   A+    +  +    + 
Sbjct: 97  VLQQQGKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAF- 155

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 11/158 (6%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL + P        +            A     +      E+    A      +     +
Sbjct: 46  ALRLCPTHADSLNNLANIKREQGFIEEATRLYLKALDVFPEF----AAAHSNLASVLQQQ 101

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
           G +  +     E++++      A      +L      + A     +  ++NP     H  
Sbjct: 102 GKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSN 161

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197


>gi|158424855|ref|YP_001526147.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
 gi|158331744|dbj|BAF89229.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
          Length = 471

 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 9/138 (6%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A +  +  +G + A+     + L+   + + A   +A       + R+A   LE+   +
Sbjct: 26  LAEASAHEQEGRLDAAEQIVAQVLEAKPDYVPALHQSAILAHKAKRPREALARLERAIAL 85

Query: 290 NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            P     H  I  +Y      +  +   +RA+ L     +   +   +  I  +   ID 
Sbjct: 86  LPTEPIFHRNICELYRSQGRLDEALVHGRRAVELA---PDDAGAHYNLGVIYYDRMEIDA 142

Query: 344 AHAKAMLAMKIAPRKEIF 361
           A A A  A+ + P     
Sbjct: 143 AIACARRALALDPTMAAA 160


>gi|254247179|ref|ZP_04940500.1| TPR repeat [Burkholderia cenocepacia PC184]
 gi|124871955|gb|EAY63671.1| TPR repeat [Burkholderia cenocepacia PC184]
          Length = 499

 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 85/223 (38%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A  + D    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 57  ARELARASGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 111

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D  D   +     ++L+L  + + A++     L       +A  I      V  +
Sbjct: 112 QQLAVDDKD--GAAQSLKQALQLRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 165

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D+A   
Sbjct: 166 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDEATGY 225

Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++      + ++ LAQI    +++  +   W   
Sbjct: 226 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 267



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 10/142 (7%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
               +L      D +++ +   +      +S  AS   A  L+   K   A+ +L +   
Sbjct: 5   ATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKPADAQPMLARELA 61

Query: 289 VN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                   P   +A     +   + VG L     + + +    E+ + +++  L +   D
Sbjct: 62  RASGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKD 120

Query: 343 QAHAKAMLAMKIAPRKEIFLLL 364
            A      A+++ P      L+
Sbjct: 121 GAAQSLKQALQLRPDYLPAALM 142



 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +PD+   ++      VLA + + A   L ++   A    R  AIL +   L      D +
Sbjct: 29  APDSNRASQVDAALLVLAGKPADAQPMLARELARASGDTRGPAILALQALL--VRGPDRV 86

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
                  + LK   N   A +  A+  ++ + K  A   L++  ++   P+       L 
Sbjct: 87  GGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKDGAAQSLKQALQLR--PDYLPAALMLS 144

Query: 304 SENTVGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK---AMLAMKIAPR 357
                 +   +    +  + N +S ++ + +S++ L    +D A  +           P 
Sbjct: 145 QMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPT 204

Query: 358 KEIFLLLAQI 367
             + L L +I
Sbjct: 205 PLMALALIKI 214


>gi|154412417|ref|XP_001579241.1| TPR Domain containing protein [Trichomonas vaginalis G3]
 gi|121913446|gb|EAY18255.1| TPR Domain containing protein [Trichomonas vaginalis G3]
          Length = 465

 Score = 43.4 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 11/154 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GD NSA   A+K L  +P +     A V   +   +         +  +   +      
Sbjct: 170 EGDANSAFESASKLLKENPSSDKAITAFVSACMALGKSHDLFVVAQRLLETTPDSY---- 225

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +   A     A  G   A+      +LK   +   A +  A +  + N  R A  ++   
Sbjct: 226 LASFAAGCHVAMSGRSDAARSLLWFTLKRMPSFAPAWLAYAMTYKNDNDNRMALSVIMTA 285

Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRAL 315
            +  P     H  +   Y  + S +    L    
Sbjct: 286 ARAFPKLNLLH--LWAAYFCVQSNDFALALAHLQ 317


>gi|304315336|ref|YP_003850483.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588795|gb|ADL59170.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 207

 Score = 43.4 bits (101), Expect = 0.095,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 13/160 (8%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +Y  A     +++       F +   + +     +   A +Y  KAL I+P+        
Sbjct: 36  EYEKAINVYRLLISKTEKDLFNIGFCFTQ---NKEYQKALKYYDKALKINPEYAEAWNNK 92

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA---RSLENADKGDMIASYHDAIE 251
                  K++ +A+   N+  +   E       L+ A   +     + G    +     +
Sbjct: 93  GIILKELKKYKKALKCYNKALEINPE-------LIEAWNNKGTTLQELGKYEEALECYNK 145

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +L++   SI        +L    K +KA    +K  K+NP
Sbjct: 146 ALEINPKSIETLTYKGITLSKIGKYKKALKCFDKALKINP 185


>gi|254445162|ref|ZP_05058638.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259470|gb|EDY83778.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 434

 Score = 43.4 bits (101), Expect = 0.095,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 1/134 (0%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           LA K+   +  + +   E  +  ++ ++AL E   + A   L M+++       A+ SL 
Sbjct: 299 LAAKLSETMGDELSPRQELDLLNVKARLALREDDQDGAASYLSMIVKRDPLNGGALLSLS 358

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKE 220
                 GDL  A+ YA  A  I   A     ++ Q  V  +++  A  FL + ++ + K+
Sbjct: 359 DLEKSRGDLAKAEYYAESATKIDAFAHRAYLSLAQLNVGKRDYDSAAKFLRSAQQIDPKD 418

Query: 221 WNRNRAILLIARSL 234
           +  +  + +   +L
Sbjct: 419 YVADYLLRIEQAAL 432


>gi|195441399|ref|XP_002068497.1| GK20387 [Drosophila willistoni]
 gi|194164582|gb|EDW79483.1| GK20387 [Drosophila willistoni]
          Length = 1185

 Score = 43.4 bits (101), Expect = 0.095,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L    ++    +   A  M  Y     T  N    V +      L       A    E  
Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPVKAKLAFERA 224

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202
           LQ+      A+  L        +  S  +   + L  +         V+          K
Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283

Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
           ++ +    A+        +  E    RA      +     + D   ++    +S ++   
Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312
           N ++      +  I +     A    EK+ K+ P        + ++Y H  S+      K
Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398

Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
               ++ E   E +E+ + +++I LE   +  +      A  I   K  + + A+I
Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 453



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 5/165 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185
            +   A+  Y+ A +      QI         Y L       GD  +A +   K L I P
Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372

Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                 + +   Y     +  R +   + KK   +      A + +A+ LE  D    + 
Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432

Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKI 286
           +Y  A   L+      I A I    A         + A+  LE  
Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESA 477


>gi|319792454|ref|YP_004154094.1| hypothetical protein [Variovorax paradoxus EPS]
 gi|315594917|gb|ADU35983.1| tetratricopeptide repeat protein [Variovorax paradoxus EPS]
          Length = 392

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 6/157 (3%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +Y  A    E +L         RE A ++L  +  R G L+ A+    K L+ +     
Sbjct: 85  GEYQRAVRVHEHLLGRGDLSRTDRERAQHALAQDFLRAGLLDRAEAALQK-LEGTRYENE 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              +++  Y  ++EW++A     +  + +   +   RA  L  ++ E    GD+ A+   
Sbjct: 144 ARLSLLAIYERSREWAQAADVAQKLDESDQASYATRRAHHLCEQATERVAAGDLPAAAKL 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             ++++L   +   +I  A   +       A   L  
Sbjct: 204 LAQAVELAPQAPRPAIDTANLQLRNGNAAAAFDTLVA 240


>gi|307197899|gb|EFN78998.1| Transmembrane and TPR repeat-containing protein CG4050
           [Harpegnathos saltator]
          Length = 982

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 88/240 (36%), Gaps = 27/240 (11%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  P+   
Sbjct: 578 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 633

Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  ++Q+   A+    A   L +  +  K+ N  R    +   +   D  D  ++ 
Sbjct: 634 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 689

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299
                ++ L ++   A    A  L  + +  +A   L +   V  HP+       + +IY
Sbjct: 690 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 747

Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             ++   +      R  R+ +++  +++ L  +  + +E G +  A      A  +AP++
Sbjct: 748 INNIKDLDAAENCYR--RILQLDPNNIQGLHNLCVVMVERGKLGLALQCLERAAALAPQQ 805


>gi|322421231|ref|YP_004200454.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18]
 gi|320127618|gb|ADW15178.1| Tetratricopeptide repeat [Geobacter sp. M18]
          Length = 636

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 4/188 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + +  Y        ++    L   +  +  ++ + A    +  +++ A    A   L   
Sbjct: 389 QALEQYQELAKMNPSDAATQLKLARALVNTKELDSAITAYQGAIKLDAESPEAHRELANL 448

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +   ++ A     + L +  D      A+   YV  K +      L    K   E   
Sbjct: 449 LRKRNMMDEAANQYQEVLRLKKDDQDARTALTAIYVKNKNYDS----LANLLKEGVELAP 504

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           + A       L    + +  A+  +  E++ L  +   A     +  +   +  +A+  L
Sbjct: 505 SDANAHYKLGLVYEFQKNYPAATAEYKEAVNLKPDHAKALNAMGRVQMKDGRIAEAKESL 564

Query: 284 EKIWKVNP 291
           E   K +P
Sbjct: 565 EAARKADP 572



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 68/243 (27%), Gaps = 22/243 (9%)

Query: 125 LEVQIALAERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L+          + A ++    +   P          +  +  +     +A   +     
Sbjct: 69  LKALAFERSGNIDAAIQEYRETLALDPEFYPASGNLGILHQ-QKGASEEAAVELSQ---G 124

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +    P     + +     +    AI    +      E     A L    +      G  
Sbjct: 125 LKTGNPRYHGGLARILAEKQLHQLAIFHFTEALAAFPE----DASLHTDLAASYDAVGQK 180

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIAN 297
                +  ++L +   +  A +     L+ + +  KA   L++    +P     H  +A 
Sbjct: 181 QKGEDEYRKALAIQPGNARARLGFGALLLERGETDKAVNELKQAAIADPGSKEVHRLLAE 240

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMK 353
            Y     + +         L  I  +  E      + +++       +D A ++  L + 
Sbjct: 241 GYLRKGDQKSADY---ERVLAGITPKVKEGPKVDHMALAEQYRNAKDLDMAISEYRLRLA 297

Query: 354 IAP 356
             P
Sbjct: 298 EEP 300


>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
          Length = 818

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 25/101 (24%)

Query: 190 VTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             +AV+          A+EW  AI    + +       R RA+                 
Sbjct: 118 AKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPRRRGRAV--------------HAY 163

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +   A+++  L    +      A           A  +L+ 
Sbjct: 164 ALKLALDAHPLVPGFL------AGMYAENADVAAATRVLDA 198


>gi|330899757|gb|EGH31176.1| TPR repeat-containing protein [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 488

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  + LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQDTLVSLLSAELAGQRNRFDIAPDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217
           SA   A      +P       A   Q   A  +  ++ ++ +  +               
Sbjct: 84  SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143

Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             + +    +L                +  ++L     GD   S    +E     +  I 
Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + D+A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|330823109|ref|YP_004386412.1| tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329308481|gb|AEB82896.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 734

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  + ++           L +     +     +   + +    +L I      A ++
Sbjct: 94  GRKAEALTAFERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCIEPGHVQAQFN 153

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R      A     + L + P             + ++    A+   +Q      
Sbjct: 154 LGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVASFDQALALQP 213

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    A  L+ R      + +   ++ D   +++L  +   +       L    +  +A
Sbjct: 214 QY----ADALVNRGNARLQRKEHAQAFADLDRAIRLNPDQAQSRQLMGTLLRDSKRHEEA 269

Query: 280 EVILEKIWKVNP 291
               ++ W+ NP
Sbjct: 270 LQEFQRAWRCNP 281


>gi|218439036|ref|YP_002377365.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp.
           PCC 7424]
 gi|218171764|gb|ACK70497.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp.
           PCC 7424]
          Length = 431

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A  +  A  +     +Q    ++   YLL  QI  A+ +   A +  + ++ +    E A
Sbjct: 339 AGTLEKAESLAKLYLKQA--PSDPQAYLLLAQIYQAQGKEQQAEDYFQKVIYLNPNCEEA 396

Query: 157 VYSLYFESCRIGDLNSA 173
           +  L       GD + A
Sbjct: 397 LIHLALLKESRGDGSGA 413


>gi|126459224|ref|YP_001055502.1| peptidase M1, membrane alanine aminopeptidase [Pyrobaculum
           calidifontis JCM 11548]
 gi|126248945|gb|ABO08036.1| peptidase M1, membrane alanine aminopeptidase [Pyrobaculum
           calidifontis JCM 11548]
          Length = 822

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 7/125 (5%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +++E   K     +     ++L+  DN    +  AAK+L           ++E  + V  
Sbjct: 552 QAVEALKKNGSPKAVDALAKALR--DNFWGVASEAAKALGEVGTAEAVAKLIE-AYPVVA 608

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--IDQAHAKAM 349
           HP         L      + + A  L+ +  +  ES  + ++ A  +G    + A     
Sbjct: 609 HPRARRAIIEALGNT--RRREAAEFLDRVLHDVGESYYVRAEAARALGKTRWEFAEHSLR 666

Query: 350 LAMKI 354
            A++ 
Sbjct: 667 KALEY 671


>gi|298369471|ref|ZP_06980788.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282028|gb|EFI23516.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 389

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 14/189 (7%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155
              AR++   + QQ   ++  L      ++     + + A      +L  P T    RE 
Sbjct: 57  GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVDDKRER 113

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            ++ L       G ++ A++   + L  +  A    + ++  Y   ++W +AI       
Sbjct: 114 VLFELAQNYQSAGLVDRAEQIFLELLGGN-MAREARQHLMSIYQQDRDWVKAIEMAQLLS 172

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAKSLIS 272
            + + +    A      +     K D+  +      A+++ K C     A++        
Sbjct: 173 HDEQTYQFEIAQFYCELAQAALFKSDLETARGNVRKALDANKKC---TRANMILGDIESK 229

Query: 273 QNKKRKAEV 281
           Q     A  
Sbjct: 230 QGDFPAAVA 238


>gi|301093702|ref|XP_002997696.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262109945|gb|EEY67997.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1358

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 82/334 (24%), Gaps = 64/334 (19%)

Query: 75   MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS------QQHTFHNEYLVYLLEVQ 128
                   D+    L     ++   +I  AR+ +  +             +     LL   
Sbjct: 711  WRLASRIDQRDYWLALAGRAMHTLDITAARRAYRSLGDSGMVLGLDRLADIEEKNLLAGH 770

Query: 129  IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK-ALDISPDA 187
            + +    YN A          P         L            A + A   A D+ P+ 
Sbjct: 771  VCMLFGDYNEARRLFLNS-SDPLAALHMQRHLLQ-------WEQALKLADSLARDLVPEL 822

Query: 188  PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
              V    ++      E+  A+                R       ++E+  + D I    
Sbjct: 823  SAVYATQLEFR---GEFDAAL----------------RMYEHAVNAIESVSRDDSIQGPE 863

Query: 248  DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----------IAN 297
              + + KL   S+      A+        R+   ++ +I       +          IA 
Sbjct: 864  PEV-ADKLRTQSL---AGVARCTFRLGDLRRGVKLVTEIGDSAVFKDCAAILESMKQIAE 919

Query: 298  IYTHLLSENTVGKLKRA----LRLEEINK-----ESVESLVIVSKIALEMGSIDQAHAKA 348
                      + K  +       L          ++ +     ++     G    A    
Sbjct: 920  AAALYEQGGQIEKAAQLFVQMKNLARAAPLMTRVKASKVHAQFARAKEAAGEFASAAEAY 979

Query: 349  MLAMKIAPRKEIFLLLAQIEQANSHNTD--KILY 380
              A ++     +     Q+E  +        +  
Sbjct: 980  ERAGEMDNVVRM-----QLEHLDGAERAFEIVRE 1008



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 43/164 (26%), Gaps = 30/164 (18%)

Query: 127  VQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
             +   A  ++  A E  E    M  +   +   +                   A +A +I
Sbjct: 963  ARAKEAAGEFASAAEAYERAGEMDNVVRMQLEHLDG-----------------AERAFEI 1005

Query: 184  SP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENADK 239
                 +     +  +    A  +  AI FL    K  + +   +    +    +    + 
Sbjct: 1006 VRETKSSEGALSAARYCAEAGRYPNAIEFLLLANKEDEAFALAQQHGQVDCFAATLGQEN 1065

Query: 240  GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 +   A     L          AA+   +     KA  +L
Sbjct: 1066 MAAKRASQVAAHYEGLSPER------AAEFYQAAGNYHKALKLL 1103


>gi|218248390|ref|YP_002373761.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802]
 gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
 gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 406

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 44/147 (29%), Gaps = 15/147 (10%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                A       ++I      A     L      +GD   A     +A+ I PD     
Sbjct: 233 GDNQGAITDYTQAIEIKPDDADAYYNRGLA--KYNLGDKQGAIADYNQAIKIKPDYATAY 290

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                      +   AI   NQ  K   ++    A +    +  N   GD   +  D  +
Sbjct: 291 NNRGNAKYNLGDKQGAIADYNQAIKIKPDYT--LAYICCGLAKSNL--GDNQGAITDYNQ 346

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRK 278
           ++K+  +        A + I +   +K
Sbjct: 347 AIKIKPDY-------ADAYICRGNAKK 366


>gi|222053475|ref|YP_002535837.1| sulfotransferase [Geobacter sp. FRC-32]
 gi|221562764|gb|ACM18736.1| sulfotransferase [Geobacter sp. FRC-32]
          Length = 859

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 84/281 (29%), Gaps = 46/281 (16%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFE 163
           M     +        LV+LL  +      Q+  A   L   L      T    +      
Sbjct: 196 MRQAFDRGDRGATAALVHLLGAR-----GQHEEAWHLLMDALGDMPDETDLMGL--AAEL 248

Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +   G    A  +  +AL+  PD    W   A++    L    + A    +      ++ 
Sbjct: 249 AQVRGQFGEAAHWLKRALEKEPDNARLWSCLAMLSSRHLGV--NCAREAADTALALTEDT 306

Query: 222 NRNRAILLIARSLENADKGDMIASYHDA-IESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                   +A       +GD  A    A  E+L L      A       L+ + +  +A 
Sbjct: 307 GGPLRAHALAAHAHVLAEGDQRAEAEGAYREALALAPRFAPALTGLGNLLMQRGRVEEAT 366

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            + + + ++ P                   L+   +L +  +   E+ V+  ++AL    
Sbjct: 367 ALYQTLKEIAP-------------------LQGWSQLIQAREVPEETAVLE-QLALAAR- 405

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
                      ++      +F L A  E+   ++      W
Sbjct: 406 ----RPSLEGPVQSH---LLFTLAAAWEKKEDYD----RAW 435



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 65/198 (32%), Gaps = 10/198 (5%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A        + A + N    I+           G +  +      ++ L   S  A + 
Sbjct: 84  GAPQTAIPFLQRAWQGNDRHPIVAARLGACLLAAGHVTEALPVLERAVDLLSGSGGAWLN 143

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            A+  ++  +   AE  LE + +  P P        +   + + +L R    E + +++ 
Sbjct: 144 LARGYLAVGE---AEKALEALDRAAPLPGKDEHLYRMSRVDALSRLDRQEEAESMMRQAF 200

Query: 326 ESLVIVSKIAL-----EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           +     +  AL       G  ++A    M A+   P +   + LA           +  +
Sbjct: 201 DRGDRGATAALVHLLGARGQHEEAWHLLMDALGDMPDETDLMGLAAELAQVRGQFGEAAH 260

Query: 381 WTQSALHAMPDPL--WIS 396
           W + AL   PD    W  
Sbjct: 261 WLKRALEKEPDNARLWSC 278


>gi|126452464|ref|YP_001067211.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a]
 gi|167846787|ref|ZP_02472295.1| tetratricopeptide repeat protein [Burkholderia pseudomallei B7210]
 gi|242314115|ref|ZP_04813131.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
 gi|126226106|gb|ABN89646.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
 gi|242137354|gb|EES23756.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
          Length = 614

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  +L L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSLTLAQMH 312


>gi|21226703|ref|NP_632625.1| hypothetical protein MM_0601 [Methanosarcina mazei Go1]
 gi|20904990|gb|AAM30297.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1024

 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 62/176 (35%), Gaps = 10/176 (5%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             +  A       +K +        I    + +  A  G    +  +    L L   ++ 
Sbjct: 586 GRYKDAFEAFEDARKVSGNGK----ISFSGKGIVFAHCGKWKKAIEEFDSVLILDPENVP 641

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLE 318
           AS+  A +LI   +  KA   LEK+   +   +++     +      +    L+   +  
Sbjct: 642 ASVMKAFALIRLEEFGKAAEFLEKLTLKDCDSDLSLCLLGFAFSKQGDLEKALRAYRKAI 701

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQIEQAN 371
           E N +++ +   +++I   +G+   A  +   ++  AP            ++E+  
Sbjct: 702 EANPKNIHARNGLAEICFIIGNSTGALKELEASIAEAPDNAYSRSLKGRVELEEQE 757


>gi|239996055|ref|ZP_04716579.1| CheY-like receiver protein [Alteromonas macleodii ATCC 27126]
          Length = 511

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 39/264 (14%)

Query: 153 REFA-VYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           R  A +  LY       GDL  A       L  S    W     V+    + +W    + 
Sbjct: 137 RLVAEIRKLYARLLFENGDLQRALSIYDDVLTRSDKVLWAQWGKVKCQYASGQWPHCKSH 196

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L+Q   ++   ++    L        + + D        +  +K  + S+ A+     + 
Sbjct: 197 LSQMVNSSLARDKAFEWLAS-----ISFEQDSYDQVEKYLNEIKFSELSLPAAKLKTIAY 251

Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----------EIANIYTHLLSENT----VGKLKRAL 315
             Q+K  +A  +L+K  K   H            E+A  Y  L  E+        L +A 
Sbjct: 252 QKQDKVVEAIDLLQK--KRAMHRSAKDRFNDFTFELAEFYLFLAEESPETNRKESLSQAR 309

Query: 316 RLEEIN------KESVESL-VIVSKIALEMGSIDQAHAKAM-----LAMKIAPRKEIFLL 363
           +L  I        ++++    +++  A+  G +++A            ++  P   I ++
Sbjct: 310 KLVGIAGRSQGDPQTLQKRDYLLAFSAVLDGDLEKAAHLLESDYVDNYLRTEP--SILVI 367

Query: 364 LAQIEQANSHNTDKILYWTQSALH 387
            A++      +  K       A  
Sbjct: 368 AAKVHHG-LGDERKAGELLLMAKR 390


>gi|255084906|ref|XP_002504884.1| predicted protein [Micromonas sp. RCC299]
 gi|226520153|gb|ACO66142.1| predicted protein [Micromonas sp. RCC299]
          Length = 1072

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP--HP---EIANIYTHLLSENTVGKLKRALRLEEIN 321
           A+  I  N  R+A   L +  +++P  H    + A +Y  +        L++   L E  
Sbjct: 305 AEMSIRLNNPRQALYCLGQALRLDPDDHDNRWDQARLYVDI--GEPKRALEQFQNLRERI 362

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIE 368
            ++ E  V ++K+  +MG+ D A +     M   P +    L   LA+++
Sbjct: 363 PDNPEVAVELAKMHYQMGNPDLAESTLDELMAAHPTRADATLVNILAELK 412


>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 942

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 77/258 (29%), Gaps = 42/258 (16%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             IG+   A     KAL   PD+               E+  AITF ++  +   +    
Sbjct: 59  LNIGEYEEAIASFEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPD--SY 116

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDN---------SIMASICAAKSLISQNK 275
            A L    +L     G+   +     +++++  +          +         L    +
Sbjct: 117 EAWLNRGLALAKL--GEYEEAIASYDKAIQIKPDKHETWHNWGLV---------LDDLGE 165

Query: 276 KRKAEVILEKIWKVNPHPEIANIY-------THLLSENTVGKLKRALRLEEINKESVESL 328
             +A    +K  +    P++   +         L        +    +  +   +  ++ 
Sbjct: 166 YEEAIASYDKALQCK--PDLHETWHNRGAALADLREYEKA--IASYDKALQFKPDLHKTW 221

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
               K   ++G  ++A      A++I P K    L   +  A     +K +     AL  
Sbjct: 222 HNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYDKALQF 281

Query: 389 MPDPLWISDDGYLSSVWL 406
            PD             WL
Sbjct: 282 KPD---------FHDAWL 290


>gi|168054571|ref|XP_001779704.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668902|gb|EDQ55500.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 89/257 (34%), Gaps = 21/257 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A N   A + H  V           + LL               +  E +   P  +   
Sbjct: 11  AGNYKNALQ-HCLVVHNKNPQRTDALLLLGAIYYQLHDFDMCIAKNEEAIRIEP--QFAE 67

Query: 157 VYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y     + +  G+++ A +Y + A+++ P+       +   Y+       A        
Sbjct: 68  CYGNMANALKEKGNIDLAIQYYSVAIELKPNFCDAWSNLASAYMRKGRLQEAAECCQHAL 127

Query: 216 KNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  + + N   LL A+ L +        +Y   +E+++L     +A    A  L+ 
Sbjct: 128 TLNPRLVDAHSNLGNLLKAQGLTHH-------AYLCYVEAIRLQPTFAIAWSNLAGLLME 180

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEE----INKESVES 327
             + +KA    ++  ++   P  A+ + +L +    +G+ + A+        +  +   +
Sbjct: 181 AGELQKALAYYKEAIRLK--PNFADAHLNLGNVLKAIGRHQEAISCYNRSIQLRPDYAIA 238

Query: 328 LVIVSKIALEMGSIDQA 344
              ++ +  E G +D A
Sbjct: 239 YGNLASVYYEQGLLDYA 255


>gi|126273311|ref|XP_001376047.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 593

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 51/149 (34%), Gaps = 9/149 (6%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKK 216
                 C       A+    KAL I PD P      A+    +  KE+S          +
Sbjct: 258 GWALLKCGRKYYERAKACFEKALKIEPDNPEFNSGFAIAAYRLDDKEYSCQRVSSLDPLR 317

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI-CAAKSLISQNK 275
            A E N +   ++   +L+  D            E+L+   +S    +  AAK    QN 
Sbjct: 318 RAVELNPDNTFVMALLALKLQDLKQEAEGERYIREALEKM-SSQPYVLRYAAKFYRRQNS 376

Query: 276 KRKAEVILEKIWKVNP-----HPEIANIY 299
             KA  +L+   +  P     H +I   Y
Sbjct: 377 PSKALQLLKIALQATPTSAFLHHQIGVCY 405


>gi|91202019|emb|CAJ75079.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 236

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G L+ A +Y  KAL I P        +   Y    + ++A   L + K   + +  + 
Sbjct: 41  SQGKLDEAMQYYKKALSIDPYNRDAHCNIATVYHKKGQLNKA---LEEYKIVLELYPYDP 97

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            IL    +++ A   +   +     ++++L  +   A      +   +N+   A    +K
Sbjct: 98  QILYNVGAIQ-ARNNNQDNAIAFWEKAVELKPDFTEAQYALGIAYAQKNRFDDAIKSYKK 156

Query: 286 IWKVNP-HP----EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESL 328
           + +  P  P     +   YT     +  +  LK++++L   N +   S 
Sbjct: 157 VLETQPDDPVLYNNLGAAYTETGKLDEAIAALKKSIQL---NPKIPMSH 202



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 12/123 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R  + ++A  +  KA+++ PD      A+   Y     +  AI    +  +   +     
Sbjct: 109 RNNNQDNAIAFWEKAVELKPDFTEAQYALGIAYAQKNRFDDAIKSYKKVLETQPD----D 164

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK----SLISQNKKRKAEV 281
            +L         + G       +AI +LK           + K    +   +     AE 
Sbjct: 165 PVLYNNLGAAYTETGK----LDEAIAALKKSIQLNPKIPMSHKNLEFAYRKKGLIEDAEK 220

Query: 282 ILE 284
            L+
Sbjct: 221 ELK 223


>gi|27379561|ref|NP_771090.1| hypothetical protein blr4450 [Bradyrhizobium japonicum USDA 110]
 gi|27352713|dbj|BAC49715.1| blr4450 [Bradyrhizobium japonicum USDA 110]
          Length = 720

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 7/188 (3%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     +A+ + P+            ++  ++ RA    ++       +    A  +  +
Sbjct: 118 AIELHERAIRLKPNYADAFCNRGMAELMIGQFERAGVDFDRALS----FQPRHAEAIAGK 173

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           ++ + +     A+      SL L   S    +   +  ++  +  +A    +     +P 
Sbjct: 174 AMVSLELRHFEAAEAAFEASLALKPGSPRILVQRGRLHLTLYRLEQAAADFDAALAQSPR 233

Query: 293 PEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            E+A  +     ++  NT G +     L E+N +S   + +++      G I  A     
Sbjct: 234 NELALCWRAQVDIMVRNTAGAMAGVKTLLEVNPQSEAGMSLLASCHANQGDIATALEYLD 293

Query: 350 LAMKIAPR 357
            A+ IAP 
Sbjct: 294 AALAIAPD 301


>gi|88704866|ref|ZP_01102579.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88701187|gb|EAQ98293.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 513

 Score = 43.0 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 82/319 (25%), Gaps = 64/319 (20%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYV--------------SQQHTFHNEYLVYLLEVQIAL 131
           +A+        A NI  A+++++ V                        L      ++A 
Sbjct: 5   EAMSQAAAQEKAGNIDEAKRLYAQVLNVEPGNKKAKKSLKALRGNSKAPLTAADFERVAQ 64

Query: 132 A--ERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                + + A   +  +  L         +  +     R+ +   A      AL + P  
Sbjct: 65  LISVGKLDAARADINKLCRLHPEQPALHNLRGVVL--SRLSEPEHALEAYKAALSLEPAF 122

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                 +   Y    ++  A+    +     +      A +    +      G    +  
Sbjct: 123 SEALNNLATVYTDLGQYKEALGCYQELVNRGEA----DAEVYANLARALRGAGQQENALE 178

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H-------------- 292
               +LK+      A       L    K  +A    E    + P H              
Sbjct: 179 ALRRALKINPLYTDAFNDIGNLLNDMGKHEEAIKAYESALNIEPRHRKALLNLALSYSSM 238

Query: 293 --PEIA-NIYTHLLSENTVGK-------------------LKRALRLEEINKESVESLVI 330
             P++A  +Y  L+      +                   ++   RL  +N E   +  +
Sbjct: 239 GKPQLAIALYQELIEMQPEDRRTLSGIANALLALGRDKDAIQYLERLLRLNPEDRPTKHL 298

Query: 331 VS---KIALEMGSIDQAHA 346
           ++      L  G    A  
Sbjct: 299 LAAVTGDNLTRGDTAYARE 317


>gi|332305783|ref|YP_004433634.1| response regulator receiver [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173112|gb|AEE22366.1| response regulator receiver [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 538

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 55/143 (38%), Gaps = 9/143 (6%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L   ++ ++      Y  A    + +L +  T  +A   L      + +  +A++   +
Sbjct: 168 PLALKIKGEVLQLCGHYTQARVFYKAILNVQ-TFTWAQLGLVKTYLHLNEDEAAEKLVLR 226

Query: 180 ALDISPDAPWVT-EAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNRAILLIARSLENA 237
            L   P++     + ++   +   ++  A+   L   + + +   R++ ++ ++R     
Sbjct: 227 -LAFKPESQLAAYDLLMSLQIKQGDFDTALECVLMASEISPRNIRRHKTVVDLSRITH-- 283

Query: 238 DKGDMIASYHDAIESLKLCDNSI 260
              D    +  A + +K   NSI
Sbjct: 284 ---DYHTQFEAAKKVVKFAKNSI 303


>gi|300870192|ref|YP_003785063.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687891|gb|ADK30562.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 600

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 2/155 (1%)

Query: 91  GLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           G++++      LA   +   V + +  + +    +L   I +     + A E     L  
Sbjct: 169 GIIALNEGMQSLAYDTLSKLVRKSNNEYADMAANVL-GDIYVIAGDTDSAIEMYLKSLAN 227

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T+  +V  L     ++ D +S ++   + L  +P+      A+   Y    ++ +AI 
Sbjct: 228 SKTQVESVKRLVKVYEQVEDYDSIKKVYEQILYQNPNDINTIIALGNLYEEENDYDKAIK 287

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           +  +  K     N   AI L+A +     K D   
Sbjct: 288 YYYRLSKIKNYTNAYEAIGLLANAYYKGSKLDEAE 322


>gi|237813335|ref|YP_002897786.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           MSHR346]
 gi|237504254|gb|ACQ96572.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           MSHR346]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  +L L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSLTLAQMH 312


>gi|255070789|ref|XP_002507476.1| PsbB mRNA maturation factor Mbb1,chloroplast precursor [Micromonas
           sp. RCC299]
 gi|226522751|gb|ACO68734.1| PsbB mRNA maturation factor Mbb1,chloroplast precursor [Micromonas
           sp. RCC299]
          Length = 601

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 76/248 (30%), Gaps = 15/248 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G+++ A++    A   +        A          + RA     +  +         
Sbjct: 228 AEGNVSKARQLFDAATAANKTHAAAWHAWGMFEKSLGNFQRARDLFLKGVR-LVPATSAN 286

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAEVIL 283
           A L  +  +   ++G +  +     E  K    +  A++    A     +    +A  + 
Sbjct: 287 AHLFQSLGVMAMERGRIQEAREHFKEGTKTESGAQSAALWQAWAILESREGNSDQARKLF 346

Query: 284 EKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEM 338
           ++   V+  PE   ++    + E   G + RA  L      +N      L  ++++    
Sbjct: 347 QRGLSVD--PENRYVWLSWAVYEAQEGFIDRARGLLRRGCELNPSDPPLLQALARLEASE 404

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISD 397
           G+I  A        K+ P  +       + +  + N  +     Q  +  A        D
Sbjct: 405 GNITAARQLFEQGTKLDPLHQANWQAWALAEWRAGNVHRARQLMQRGVWVAPR----CCD 460

Query: 398 DGYLSSVW 405
              L   W
Sbjct: 461 ACKLFQAW 468



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 57/170 (33%), Gaps = 6/170 (3%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-ML 147
             G+M++    I  AR+     ++  +      ++     +   E   + A +  +  + 
Sbjct: 292 SLGVMAMERGRIQEAREHFKEGTKTESGAQSAALWQAWAILESREGNSDQARKLFQRGLS 351

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
             P  R   +    +E+   G ++ A+    +  +++P  P + +A+ +        + A
Sbjct: 352 VDPENRYVWLSWAVYEAQ-EGFIDRARGLLRRGCELNPSDPPLLQALARLEASEGNITAA 410

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                Q      + +        A +L     G++  +       + +  
Sbjct: 411 RQLFEQ----GTKLDPLHQANWQAWALAEWRAGNVHRARQLMQRGVWVAP 456


>gi|167739676|ref|ZP_02412450.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 14]
          Length = 376

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  +L L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSLTLAQMH 312


>gi|156740060|ref|YP_001430189.1| hypothetical protein Rcas_0032 [Roseiflexus castenholzii DSM 13941]
 gi|156231388|gb|ABU56171.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 1445

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 72/226 (31%), Gaps = 15/226 (6%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +     DL+ A   A   L+  P      + + + ++  +++  A        +    +
Sbjct: 14  RQWLETNDLDRAIGMAHHILETYPHCLEAHQMLGEAHLANRQYEEACMHFEHALQ----F 69

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +      L+   +     G +  +      +L++  +         +          A +
Sbjct: 70  DPEHIPALVGLGMTCERLGQLERAISAFERALEIKPDLPELRSQLLRLYTDAWGSEYAHL 129

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L +         +A +Y           +    ++     + ++S V ++++       
Sbjct: 130 RLSRA-------GLARLYA--KGHMLPQAISEFRQVVADQPDRLDSRVALAEVLWRDEQE 180

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSAL 386
           ++A       +   P   +  L+L  IE A  + + +  +W  +A 
Sbjct: 181 EEAADVCRDILAKHPHVLKANLILGYIELAAGNPSGE-QFWKAAAA 225



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 16/171 (9%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            + +  +  LA RQY  A    E  LQ       A+  L     R+G L  A     +AL
Sbjct: 42  AHQMLGEAHLANRQYEEACMHFEHALQFDPEHIPALVGLGMTCERLGQLERAISAFERAL 101

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           +I PD P +   +++ Y  A  W               E+   R +     +   A    
Sbjct: 102 EIKPDLPELRSQLLRLYTDA--W-------------GSEYAHLR-LSRAGLARLYAKGHM 145

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  +  +  + +    + + + +  A+ L    ++ +A  +   I   +PH
Sbjct: 146 LPQAISEFRQVVADQPDRLDSRVALAEVLWRDEQEEEAADVCRDILAKHPH 196


>gi|186475263|ref|YP_001856733.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184191722|gb|ACC69687.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
          Length = 592

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 46/166 (27%), Gaps = 4/166 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                      + A +    +L +        Y L     +  ++  A      +L + P
Sbjct: 19  HALALHRAGDLDRAGQAYRAILDLQPDDANTRYMLGVLHLQRQEVERAIECFDASLALQP 78

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D            +   +   A  F  +  + A     + A+                 +
Sbjct: 79  DHADCLNDRGIAALSRGDHEDAAHFFRRATECAP----HDALAHCNLGKALRRLSKPEEA 134

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 +L L D  + A++ +A  L +  +  +A    E   +  P
Sbjct: 135 LASFQRALALDDGDVEAALGSADMLETLARPHEAVTAYEYAARFAP 180


>gi|90022893|ref|YP_528720.1| TPR domain-containing protein [Saccharophagus degradans 2-40]
 gi|89952493|gb|ABD82508.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
          Length = 591

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 28/298 (9%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +H++ LAR+ +  +  Q     +  + L    + +    Y  A    + ++        A
Sbjct: 284 SHDLELARQQYQILFSQR--PQDADILLSLALVEMESELYESAISHFQQLIDRKQHDATA 341

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQK 214
            Y L          + A ++      ++P   +++ AV +    +  ++   A+ ++  K
Sbjct: 342 HYQLGKIHELRNRPDLALQHYK---AVTPSQEFLS-AVYKASEMMAQQDIYNALQYV--K 395

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             ++    + R  L +  +    D G+   +     + L +  +S+      A      +
Sbjct: 396 GLHSSTPKQYRDSLYLREANLLLDAGNPDGALAAMAKGLDIAPDSVNLLYSRAMLYTQLD 455

Query: 275 KKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-------EINKE 323
               A      ILE        P+ A    + L      +  R             +N +
Sbjct: 456 DLALAEADFTQILEL------RPDNAAA-LNALGYTLADRTDRLDEAYNYISRALSLNPD 508

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
               L  +  +   +G+I  A  +   AM I P  EI   L ++     +  + I  W
Sbjct: 509 DPAILDSMGWVEYRLGNIPAALKRLRQAMSILPDHEIAAHLGEVLWVTGNKNEAIETW 566


>gi|119358297|ref|YP_912941.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119355646|gb|ABL66517.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 243

 Score = 43.0 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 7/103 (6%)

Query: 160 LYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  ++      GD  SA  + TKA+++ P +     +       + ++  AI   +    
Sbjct: 30  IMLQAEEQLDKGDYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDAIEDFS---- 85

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A E + N A     R+   A   D   +  D   ++KL    
Sbjct: 86  IAIELDPNAAEAYYNRAAAKASIEDHKGAREDRKMAMKLDPKL 128


>gi|327262216|ref|XP_003215921.1| PREDICTED: tetratricopeptide repeat protein 13-like [Anolis
           carolinensis]
          Length = 823

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 40/229 (17%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSA-QRYAT--KALDISPDA 187
              Y+ A ++   MLQ       A+Y       R G  D+ +A        + + ++PD 
Sbjct: 132 SGLYDEAIQQFSTMLQEQPELVSAIYGRGIAYGRKGLHDIKNAELALFELSRVISLAPDH 191

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---------------------------- 219
           P V E   +          A+  L++  +                               
Sbjct: 192 PEVFEQRAEILSPLGRIVEALADLSKAIQLKPSARLYRHRGTLYFISEDYATAQEDFQNS 251

Query: 220 -EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E NRN+ I ++ + L    +G +  +     E+LK   + + A     ++         
Sbjct: 252 LELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFVDAYKSLGQAYRELGNFEA 311

Query: 279 AEVILEKIWKVNP-HPEIAN-----IYTHLLSENTVGKLKRALRLEEIN 321
           A    +K   +N  H +        +Y H   +  +   KR L+LE  N
Sbjct: 312 ATENFQKALMLNQNHVQTIQLGGMMLYHHGSPDEALKNFKRCLQLEPYN 360


>gi|322816107|gb|EFZ24540.1| tetratricopeptide repeat domain protein [Trypanosoma cruzi]
          Length = 1344

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 56/308 (18%)

Query: 97  AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-------MLQ 148
           + ++  A+ M    +   H        +LL  QI       ++A + LE        M  
Sbjct: 504 SGDLNRAQTMITKSIRHVHVLPE---AFLLSAQICQYIGNASLASQALEQALTLDFDMKD 560

Query: 149 IPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTE--AVVQQ 197
            P           + + Y  +     L  A +   +   +     P  P   +    +  
Sbjct: 561 QPQYNLLHGIVLGMMNKYQNAL--EALQLALKLTKEKSRVTTKGRPLQPLSLQDHVSLYL 618

Query: 198 YVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD---A 249
            +       ++   A   L +     KE           ++   A    MIA+  D   A
Sbjct: 619 QLAQTYLRLRDTEEARATLVEATAMFKE---------TTQAGRVAIANAMIAARTDMDKA 669

Query: 250 IESLKLCDN----SIMASICAAKSL--ISQNKKRKA---EVILEKIWKVNPHPEIANIYT 300
           +E LK           A    A       QN+   A   E ++E++     + ++   YT
Sbjct: 670 VEILKQVPPRSEFFTAAKTRMANLYLTYRQNRHMYANCFEELVEEVPTAQSYFQLGEAYT 729

Query: 301 HL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           ++   E  +   +RA     ++ E+ E  V + +  +      +A      A+  A    
Sbjct: 730 NIQEPEKAIAAYERAK---AMDPENAELAVRIGRALVSTHDYQRAVRYYRDAV--ASDGV 784

Query: 360 IFLLLAQI 367
            F +LA +
Sbjct: 785 NFTVLADL 792


>gi|284051331|ref|ZP_06381541.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 526

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 22/277 (7%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMML 147
            G     +  +  A + +    +     +  LV +L+   Q+     Q+  A +  +   
Sbjct: 246 QGTALANSGKLSEAAESYQKALEL----DPNLVEILQPLGQVLTQLNQWEAAVDIFQKAT 301

Query: 148 QIPATREFAVYSLYFESCRIGDLN-SAQRYATKALDISPDAP----WVTEAVVQQYVLAK 202
           Q+      + Y    ++    D    A     +A ++ P +      + +A+ + Y    
Sbjct: 302 QVDP-NSASFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLY---- 356

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            WS AI    +        N+      +    +     D   + +   +S +   NS  +
Sbjct: 357 HWSEAIATYQKALYLNPP-NQAEIQTHLQEVQDKQRHLDEEIAAYS--DSHEFHPNSSES 413

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEE 319
               A+ L S+ K   A +   +   +NP   +A+    YT    +     +    +  E
Sbjct: 414 YEKFAQFLRSKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAE 473

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +N  S      + +  +E G +D+A A    ++ I P
Sbjct: 474 LNPYSPHVQYHLGEALVEEGRLDEAIAHFKQSITIDP 510



 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 85/255 (33%), Gaps = 16/255 (6%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y +L   L ++       A   +    + +   +E L  L    +  ++ ++        
Sbjct: 175 YLSLGQTLEAL--GETEEAIASYRRSYELNPSLSEALPKLQT--VLESQGRWEELATLYR 230

Query: 145 MM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
              +  P +     Y     +       +A+ Y  KAL++ P+   + + + Q      +
Sbjct: 231 RCCIVDPNSATSHKYQGTALANSGKLSEAAESY-QKALELDPNLVEILQPLGQVLTQLNQ 289

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           W  A+    +  +   + N       + ++L   D+  ++ +      + +L   S    
Sbjct: 290 WEAAVDIFQKATQ--VDPNSASFYHQLGQALAKCDR--LLEALAAYKRASELHPTSTPVL 345

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLE 318
               ++L       +A    +K   +NP P  A I THL       +     +       
Sbjct: 346 FDLGQALTKLYHWSEAIATYQKALYLNP-PNQAEIQTHLQEVQDKQRHLDEEIAAYSDSH 404

Query: 319 EINKESVESLVIVSK 333
           E +  S ES    ++
Sbjct: 405 EFHPNSSESYEKFAQ 419



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 60/202 (29%), Gaps = 35/202 (17%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +  R G L+ A     +A+  SP + W    + +      +   AI       + A E 
Sbjct: 10  NQLLRKGQLDEAIASYNQAIAESPQSAWYYHNLGEALSQQGKIDEAI----AAYRQATEL 65

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N N A            +G++  +     ++++L  +        A  LI + +  +A  
Sbjct: 66  NPNSAWSYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLALVLIKEGRLEEAVS 125

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +L+K                                 E+  +  E    + K   +    
Sbjct: 126 LLQKA-------------------------------IELKADDAELYHSLGKAYQQQQQY 154

Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363
            +A       +++ P      L
Sbjct: 155 SEAVTAYRQGLELNPYWSDCYL 176


>gi|153006768|ref|YP_001381093.1| hypothetical protein Anae109_3930 [Anaeromyxobacter sp. Fw109-5]
 gi|152030341|gb|ABS28109.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 974

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 49/169 (28%), Gaps = 5/169 (2%)

Query: 54  AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY---KALYTGLMSIAAHNIPLARKMHSYV 110
           A  +  A++R  L  PA     L     D       A++  L  +A    P AR +   +
Sbjct: 699 AVRIQRAIARLRLGQPAAARRELEATGRDGRMPAEAAVWYALADVALGRAPRARALLEKL 758

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           S   T     LV+    +   AE     A        +        +  L       G  
Sbjct: 759 SLARTP--PPLVHAALGRALEAEGNLAGAERAYRTAAEREPDAPEGLAGLGRVLVARGHA 816

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
             A      A+ + P       A+ +  ++A     A   L+       
Sbjct: 817 KDAIAPLEDAVRMDPADLEARRALGEARLVAGLAGSARAELDAVLLARP 865


>gi|58039993|ref|YP_191957.1| hypothetical protein GOX1560 [Gluconobacter oxydans 621H]
 gi|58002407|gb|AAW61301.1| Hypothetical protein GOX1560 [Gluconobacter oxydans 621H]
          Length = 514

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 1/129 (0%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R GDL        +AL + PD P     + +        ++AI    +  K +     
Sbjct: 291 ALRSGDLEQEADALHRALVLRPDNPEFLIQLAEVEDQRGNHTQAIDLYTRALKASPPRKE 350

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVI 282
               +L+ R++   + G+      D   +L+L  +          + I  +  + +A  +
Sbjct: 351 ILWPILLGRAMAAEESGNWPMVQDDMKHALELAPDQPEVLNFVGYANIEHDADQAQALAM 410

Query: 283 LEKIWKVNP 291
           L+K   + P
Sbjct: 411 LKKAVDLQP 419


>gi|307154454|ref|YP_003889838.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 434

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 8/131 (6%)

Query: 134 RQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           + Y  A E       L     R +    L     R GD  SA     KA+ ++P      
Sbjct: 92  KDYRGAIEDYNKAISLNPKEARYYNNRGLALH--RSGDSKSALEDYNKAISLNPKLAEAY 149

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                     +++ RA+   NQ  +     +   A     R +  ++ G+      D   
Sbjct: 150 TNRGFIRDELRDYRRALADHNQALR----LDPKNATAYNNRGVTLSNLGNFQEGLEDFER 205

Query: 252 SLKLCDNSIMA 262
           +++L  +  +A
Sbjct: 206 AIRLDPSIAIA 216



 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 11/114 (9%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +  D   A    +K + I+P                K++  AI   N+          
Sbjct: 54  KLKAKDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNP---- 109

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             A     R L     GD  ++  D  +++ L           A++  ++   R
Sbjct: 110 KEARYYNNRGLALHRSGDSKSALEDYNKAISLNPKL-------AEAYTNRGFIR 156


>gi|167919999|ref|ZP_02507090.1| tetratricopeptide repeat protein [Burkholderia pseudomallei BCC215]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|158341361|ref|YP_001522526.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158311602|gb|ABW33212.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
          Length = 505

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 5/154 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A       +Q+      A Y+   +  R+GD   A     K + ++PD       
Sbjct: 332 GDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLNPDNALAYNN 391

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    + + AI   ++  +   ++          R        D   +  D  +++
Sbjct: 392 RGNALSELGDLNGAIADYDKAIQLNPDYPG----AYYNRGNTRFRLSDPNGAITDYDKAI 447

Query: 254 KLCDNSIMASICAAKSLISQNKKRKA-EVILEKI 286
           +L  +   A    A    S   ++ A   + E  
Sbjct: 448 QLNPDHAGAYYNRAIVRRSLGDRKGAIADMTEAA 481



 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 63/209 (30%), Gaps = 15/209 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            L  + A  +     A E       L       +    L  +     D   A     KA+
Sbjct: 254 FLRAEKARQQNDNKAAIELYTRAIRLNADYANAYNNRGLLRQ--NFNDNKGAIADFEKAI 311

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++PD  +             +   AI   ++  +         A     R ++    GD
Sbjct: 312 QLNPDDSFAYNNRGNALSELGDREGAIADYSKAIQLNPV----NAGAYYNRGIDRYRLGD 367

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299
              +  D  ++++L  ++ +A      +L        A    +K  ++N  P+    Y  
Sbjct: 368 NRGAIADFEKTIQLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLN--PDYPGAYYN 425

Query: 300 ---THLLSENTVGKLKRALRLEEINKESV 325
              T     +  G +    +  ++N +  
Sbjct: 426 RGNTRFRLSDPNGAITDYDKAIQLNPDHA 454


>gi|115377527|ref|ZP_01464727.1| putative TPR domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310820083|ref|YP_003952441.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115365467|gb|EAU64502.1| putative TPR domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309393155|gb|ADO70614.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 241

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 54/184 (29%), Gaps = 11/184 (5%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQR 175
           +E L  LL   +    ++QY  A +     +         VY++        G    AQR
Sbjct: 2   DEPLKQLLTLGRGYFDKKQYAQAEQ-YLAQVVEQNQSFADVYNMLGIIYHDQGQFARAQR 60

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--------NRNRAI 227
               AL I+P        +   Y    +++ A           K              A 
Sbjct: 61  AFEAALRINPAYTEAALNLAVIYNDMGKYAEAKEVYQGALAQQKNAPGEMDPYVKGKIAN 120

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +        +  G    +  +   +L LC   +   I    +L    +  +A    E+  
Sbjct: 121 MYADIGNVFSSNGAWAQAIEEYQRALVLCPQFVDIRIKLGDALRDAGRHAEALAQFEQAI 180

Query: 288 KVNP 291
             NP
Sbjct: 181 AQNP 184


>gi|92114109|ref|YP_574037.1| sulfotransferase [Chromohalobacter salexigens DSM 3043]
 gi|91797199|gb|ABE59338.1| sulfotransferase [Chromohalobacter salexigens DSM 3043]
          Length = 1415

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 4/115 (3%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A K +   P  P     + +     KE+  A   L  K +  +  +  +   L   + + 
Sbjct: 18  ARKQVQRHPTDPDAWLTLGKLQAGQKEFYDAKASLE-KARELRPNHHEQEEWLGYVAHKQ 76

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               D +    DA+E   L  NS       +   +   K  K+    +K W+ +P
Sbjct: 77  HRLQDALQHLQDALE---LAPNSAFGLATLSYLYLDMGKPYKSIEYAKKAWQFSP 128


>gi|325143912|gb|EGC66222.1| IgA-specific serine endopeptidase [Neisseria meningitidis M01-240013]
 gi|325206456|gb|ADZ01909.1| IgA-specific serine endopeptidase [Neisseria meningitidis M04-240196]
          Length = 1786

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 73/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1157 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1201

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDISPD 186
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S +
Sbjct: 1202 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1253

Query: 187  APWVTEAVV----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                 EA      QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1254 QKATAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1312

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1313 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1364

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1365 ---SQPQRRKRRAA 1375



 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 12/230 (5%)

Query: 163  ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            E  +     + ++ A  A   +       E   +Q    +  S  +   ++K++ A E +
Sbjct: 1026 EQVKRQQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEKEREAAELS 1085

Query: 223  RNRAILLI--ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              + +     A++L    K +   +   A E  +  +    A+  +AK  + + ++R+  
Sbjct: 1086 AKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQRVGEEERRQTA 1145

Query: 281  VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                +  K    P     Y     +    +  R      + + +VE  +  ++  L    
Sbjct: 1146 QSQPQRRKRRAAP---QDYMAASQDRPKRRGHR-----SVQQNNVE--IAQAQAELARRQ 1195

Query: 341  IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             ++  A  +LA + A  +     LA   +A +    +          A  
Sbjct: 1196 QEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAER 1245


>gi|319761242|ref|YP_004125179.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115803|gb|ADU98291.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 734

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  + ++           L +     +     +   + +    +L I      A ++
Sbjct: 94  GRKAEALTAFERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCIEPGHVQAQFN 153

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R      A     + L + P             + ++    A+   +Q      
Sbjct: 154 LGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVASFDQALALQP 213

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    A  L+ R      + +   ++ D   +++L  +   +       L    +  +A
Sbjct: 214 QY----ADALVNRGNARLQRKEHAQAFADLDRAIRLNPDQAQSRQLMGTLLRDSKRHEEA 269

Query: 280 EVILEKIWKVNP 291
               ++ W+ NP
Sbjct: 270 LQEFQRAWRCNP 281


>gi|262304965|gb|ACY45075.1| acetylglucosaminyl-transferase [Chthamalus fragilis]
          Length = 289

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 8/158 (5%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES 164
            ++   +    H + L  L    I   +     A     + +   P     A  +L    
Sbjct: 42  CYNTALRLMPTHADSLNNL--ANIKREQGFTEEAIRLYCKALEVFPEF-AAAHSNLASVL 98

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G LN A  +  +A+ I P        +       ++   A+    +  +    +   
Sbjct: 99  QQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAF--- 155

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            A      +  + D G++  +      +L+L  +   A
Sbjct: 156 -ADAHSNLASIHKDSGNIPEAIQSYRTALRLKPDFPDA 192



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 48/158 (30%), Gaps = 11/158 (6%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL + P        +            AI    +  +   E+    A      +     +
Sbjct: 46  ALRLMPTHADSLNNLANIKREQGFTEEAIRLYCKALEVFPEF----AAAHSNLASVLQQQ 101

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
           G +  +     E++++      A      +L      + A     +  ++NP     H  
Sbjct: 102 GKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSN 161

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A+I  H  S N    ++       +  +  ++   ++
Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALRLKPDFPDAYCNLA 197



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 69/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             A+++ P+ P     +          S +    N   +         A  L   +    
Sbjct: 10  RHAIELQPNFPDAYCNLANALKEKGLVSESEECYNTALRLMPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +     ++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGFTEEAIRLYCKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           ++ P 
Sbjct: 184 RLKPD 188


>gi|260827198|ref|XP_002608552.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
 gi|229293903|gb|EEN64562.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
          Length = 1183

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 87/253 (34%), Gaps = 37/253 (14%)

Query: 136 YNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           Y  A    +  + + P   +  +  L   +   G +  A  +  +AL I+ D P     +
Sbjct: 518 YQDAERLYKEVLREHPNYVDCYLR-LGCMARDRGQIYEASDWFKEALQINQDHPDAWSLI 576

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA----------RSLENADKGDMIA 244
              ++  +EW        +  K+    +   ++L +           +  +  +K     
Sbjct: 577 GNLHLAKQEWGPGQKKFERILKHPDTASDAYSMLALGNVWLQTLHQPQRDKEKEKRHQDR 636

Query: 245 SYHDAIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPE 294
           +     + L+    N   A    ++ A K+ I + +      R+A   +  +W       
Sbjct: 637 ALAMYKQVLRNDPKNLYAANGIGAVLAQKNCIREARDVFAQVREATADMRDVWLN----- 691

Query: 295 IANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           +A+IY       +  +     LK+         +  + L+ +++   ++G   +     +
Sbjct: 692 LAHIYVEQRQYVSAIQMYENCLKKF-----YKCQDTDVLLYLARAYYKLGKHKECRQILL 746

Query: 350 LAMKIAPRKEIFL 362
            A  ++P   + L
Sbjct: 747 KARHVSPHDTVLL 759



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 81/252 (32%), Gaps = 26/252 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISP 185
            +    +  Y+ A +      Q  +T+       L       GD  +A +   K L   P
Sbjct: 318 ARSFHVQGDYDQAFQYYYQATQFASTQFVLPQFGLGQMYIYRGDNENAAQCFEKVLKHFP 377

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMI 243
           +     + +   Y  + +         Q  K    +  +   A + +A+ LE +D    +
Sbjct: 378 NNYETMKILGSLYAQSSD-QEKRDIAKQHLKKVTEQFPDDVEAWIELAQILEQSDIQGAL 436

Query: 244 ASYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVI----LEKIWKVNPHPE-- 294
            +Y  A   LK    + +   I              ++A+      L++  +   H E  
Sbjct: 437 QAYGTATRILKEKVQADVPPEILNNVGALHFRLGNLQEAKKYYVASLDRSKQEAQHDETY 496

Query: 295 -----------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                      +A ++  L       +L     +   +   V+  + +  +A + G I +
Sbjct: 497 YSAISVTTSYNLARLFEALCMYQDAERL--YKEVLREHPNYVDCYLRLGCMARDRGQIYE 554

Query: 344 AHAKAMLAMKIA 355
           A      A++I 
Sbjct: 555 ASDWFKEALQIN 566


>gi|167895374|ref|ZP_02482776.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 7894]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|160886584|ref|ZP_02067587.1| hypothetical protein BACOVA_04595 [Bacteroides ovatus ATCC 8483]
 gi|237723405|ref|ZP_04553886.1| TPR-repeat-containing protein [Bacteroides sp. 2_2_4]
 gi|260173318|ref|ZP_05759730.1| TPR repeat-containing protein [Bacteroides sp. D2]
 gi|315921592|ref|ZP_07917832.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108469|gb|EDO10214.1| hypothetical protein BACOVA_04595 [Bacteroides ovatus ATCC 8483]
 gi|229447927|gb|EEO53718.1| TPR-repeat-containing protein [Bacteroides sp. 2_2_4]
 gi|313695467|gb|EFS32302.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 272

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 9/170 (5%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +A   L Q  K  +  N   A+L     L     G+   +      +L     ++   + 
Sbjct: 39  KAEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLD 97

Query: 266 AAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEI 320
            A   +   K  +A      +L++  K N    +   Y + L  +    ++    RL E+
Sbjct: 98  RAAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLEL 155

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
           + +S    + ++ +  + G   ++       +   P    +++  A +E+
Sbjct: 156 DPQSYSGRLGLATLEQKEGKFRESLEILNKMITATPDDATLYIARADVER 205



 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 6/166 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           + L    I +   + + A+    +++ +    +E  +   Y    R  D  +A+    + 
Sbjct: 94  ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L++ P +      +        ++  ++  LN+      +     A L IAR+    +  
Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFRESLEILNKMITATPD----DATLYIARADVEREMK 208

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  D  E+++L   S  A +      ++Q KK  A+   EK 
Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254


>gi|9910234|ref|NP_064481.1| interferon-induced protein with tetratricopeptide repeats 1-like
           protein [Rattus norvegicus]
 gi|7329753|emb|CAB82773.1| glucocorticoid-attenuated response gene 16 product [Rattus
           norvegicus]
          Length = 463

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 88/236 (37%), Gaps = 29/236 (12%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            + + +  + P  +      L  +   +G+ + A+ +  +AL  +    +V     + + 
Sbjct: 198 RKAVRLNPEDPHLKVL----LALKLQDLGEQDEAETHIEEALSSTSCQSYVFRYAAKYFR 253

Query: 200 LAKEWSRAITFLNQKKKNAKEW---NRNRAILLIARSLENADKGDMIASYHDAI------ 250
              + + A+  L++  + +      +  + +    + ++    G+  A   + I      
Sbjct: 254 RKGDINEALHLLHRALQTSPSSGYLHYQKGLCYKQQMIQLKTSGNRQARRQENIQELAHQ 313

Query: 251 ------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                 E+L L     MA +C A+      +  +AE   ++   +N      N+  H+  
Sbjct: 314 AICEFQETLNLRPTFEMAYVCMAEMQAEIGQYEEAEGNFQEALNLN------NLVAHIE- 366

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           ++   +  R+ +  + +++   +  +     L++     A  K + A++    + +
Sbjct: 367 QDIHFRYGRSQQFHKKSEDKAITHYLKG---LKLEEKSFAWRKLLTALEKVAERRV 419


>gi|312129655|ref|YP_003996995.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906201|gb|ADQ16642.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 468

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 5/134 (3%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              ++LE  +      +    IE+         A +       +    +KA     K  +
Sbjct: 81  AFKKALEVENAAGGKKAKD--IEAKLKSPELASAYLMQGAGYYNSKNYKKAAEFFSKSSE 138

Query: 289 VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           ++P    A +Y  +     EN  G LK          +       V++I       D+A 
Sbjct: 139 ISPKDTTAALYAGIAEQLLENNAGALKHLNNFIANGGKDASVFYSVAQIYKADKKFDEAV 198

Query: 346 AKAMLAMKIAPRKE 359
                 M++ P   
Sbjct: 199 QVLQKGMEVNPTNS 212


>gi|254293220|ref|YP_003059243.1| hypothetical protein Hbal_0852 [Hirschia baltica ATCC 49814]
 gi|254041751|gb|ACT58546.1| Tetratricopeptide TPR_2 repeat protein [Hirschia baltica ATCC
           49814]
          Length = 273

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 5/122 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             IG    A   AT+AL + P    +++ + + ++      RA   L     + ++W   
Sbjct: 89  RAIGSAERAVDVATQALALHPGDVELSKTLAKAHMDTGRPDRATNALYNAVPDGEDW--- 145

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +L     +     GD   +     ++L +  ++ +     A SL  + K  +AE  L 
Sbjct: 146 --VLYSLYGIALDQLGDHKKAQLRYTKALDISPDNQVILANYALSLALEGKPEEAEAKLR 203

Query: 285 KI 286
             
Sbjct: 204 HA 205


>gi|223938532|ref|ZP_03630424.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223892794|gb|EEF59263.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 432

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 72/251 (28%), Gaps = 39/251 (15%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRI 167
                   N+ + Y    Q+ L ++ Y +A         +  T E +       +   + 
Sbjct: 187 AEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKSTDLNPTNELSYEYRGWAY--YKS 244

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A    + A+ ++P       A      LA E S  +           + N    I
Sbjct: 245 GAYEKAISDYSSAIQLNP----AESAAYGSRGLAYEKSGELEKAIADYSRGIKLNPTNVI 300

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L AR+     +G       D  E++K              SL   N            W
Sbjct: 301 ALHARAAAYHKQGKFDRVIEDYREAIKRKPT---------DSLSYNN----------LAW 341

Query: 288 KVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                  +     +      E  V   K+A  L E  K      +  +    E G+ D+A
Sbjct: 342 -------LQATCENASFRNGEEAVKNAKKACELAEWKKGYCVGTLSAAYA--EAGNFDEA 392

Query: 345 HAKAMLAMKIA 355
              A  A+ + 
Sbjct: 393 LKYAKQALTLE 403


>gi|209526542|ref|ZP_03275068.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209493048|gb|EDZ93377.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 728

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 76/208 (36%), Gaps = 18/208 (8%)

Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  ++      G+ + A     +AL++ P+ P V   +        +   AI    +  +
Sbjct: 20  LLHQAETSYLQGEYDQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALE 79

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                 +  A L          +G + ++     +++ L  +     +  A++L    ++
Sbjct: 80  FDPNLPQAHANL----GSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRE 135

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSEN----TVGKLKRALRLEEIN----KESVESL 328
            +A ++ +K  +++    +     HL ++       GKL+ A+ L +          E+ 
Sbjct: 136 SEALIVEQKANQIH---SLTGGSVHLYNQGNQLFNQGKLEEAIALWKQAIVADPNLAEAY 192

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +  +    G   +A      A+++ P
Sbjct: 193 CQLGIVHRHQGQPQEAIPFLEKAIELKP 220



 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 70/218 (32%), Gaps = 10/218 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A  + +         N   VY+    ++    Q   A       L+       A 
Sbjct: 31  GEYDQA--IAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAH 88

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G L SA     KA+ + PD   V   + +        S A+    ++K N
Sbjct: 89  ANLGSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRESEALIV--EQKAN 146

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   ++ L  +  +  ++G +  +     +++    N   A          Q + +
Sbjct: 147 QIHSLTGGSVHLYNQGNQLFNQGKLEEAIALWKQAIVADPNLAEAYCQLGIVHRHQGQPQ 206

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310
           +A   LEK  ++ P     H  I  IY    S+    +
Sbjct: 207 EAIPFLEKAIELKPNLVAAHQNICGIYRD-SSDLAAAR 243


>gi|167829957|ref|ZP_02461428.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 9]
 gi|226197877|ref|ZP_03793451.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225930065|gb|EEH26078.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|163857686|ref|YP_001631984.1| putative Flp pilus assembly protein [Bordetella petrii DSM 12804]
 gi|163261414|emb|CAP43716.1| putative Flp pilus assembly protein [Bordetella petrii]
          Length = 295

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 41/129 (31%), Gaps = 5/129 (3%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L+        Q   +      +L          + L   +   GD   A +   +A+ ++
Sbjct: 100 LQADALRRTGQEEQSEAAYRKLLGGSQ-AAQGWHGLGLLAGARGDYAQAAQDLERAVKLA 158

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    +   +    + A + + A   L +      E + +   +L   +L    +G+ + 
Sbjct: 159 PTDAQMLGDLGYARLRAGDSAGARVPLGKA----AELDPSNIKVLANMALLLVVEGNAVQ 214

Query: 245 SYHDAIESL 253
           +      + 
Sbjct: 215 AQQLMDRAN 223


>gi|312222011|emb|CBY01951.1| similar to pre-mRNA-splicing factor prp1 [Leptosphaeria maculans]
          Length = 932

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 35/262 (13%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E  + GD   A++   ++ +  P    +    V   V A  + +A +FL   +++A   
Sbjct: 609 REMWQSGDPEGARKVLGRSFEKLPGNENLYTRAVDFEVDAGNYDQARSFLQVARESAATD 668

Query: 222 NRNRAILLIARSLENADKG-------------------------DMIASYHDAIESL--- 253
                  ++ R L N +                           + ++   +A E+    
Sbjct: 669 RIFMKSAVLERQLGNFEVALDICNQALQNWPHSWKLHAVKGQIYEQLSKLKEAQEAFNIG 728

Query: 254 -KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKL 311
            +    S    I  ++    Q    KA   L++  + NP +PE+  +   +  E     +
Sbjct: 729 TRAAPKSPTLYILLSRIQEKQGAIVKARSTLDRGRQQNPKNPEL--LCEAVRLERRQQNI 786

Query: 312 KRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQ 369
             A ++  I  +E   S ++ ++  + + +  Q   +A+ A++      ++F+++A+I  
Sbjct: 787 PAAQKIMAIALQECPNSGLLWAEKIMHLEARTQRKPRALEAIRKVENDAQLFVVVARIFW 846

Query: 370 ANSHNTDKILYWTQSALHAMPD 391
           A          W   A+   PD
Sbjct: 847 AERRLDKAA-TWFTKAVVLDPD 867



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 15/194 (7%)

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W+ +A  +      +   A + +        + +  R  + +  +   + +G    +  
Sbjct: 497 EWLAQA--EICEEEGDKGTAASIVKATIGWGLDEDDERRDIWLEDAKSISSRGRFETARA 554

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLL--- 303
               ++ +   S      +A              +LE+     P+ E +  +Y   +   
Sbjct: 555 ILGHAVSIFPYSTTVWHASADLEKHHGTAESLLSVLERAVTACPNSESLWLLYAREMWQS 614

Query: 304 --SENTVGKLKR-ALRLEEINKESVESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKE 359
              E     L R   +L      + E+L   +    ++ G+ DQA +   +A + A    
Sbjct: 615 GDPEGARKVLGRSFEKL----PGN-ENLYTRAVDFEVDAGNYDQARSFLQVARESAATDR 669

Query: 360 IFLLLAQIEQANSH 373
           IF+  A +E+   +
Sbjct: 670 IFMKSAVLERQLGN 683


>gi|312218035|emb|CBX97981.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1147

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 72/223 (32%), Gaps = 32/223 (14%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN 212
           +  +++E     D   A++   KA ++SP      E + + +    EW      A   ++
Sbjct: 300 LLGIFYEDYN-KDRKRARQCFQKAFELSPSEIVAAERLARLFANQGEWDIVEVVAQRVVD 358

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMASICAAKSL 270
             K      ++ + +     +L                 + +L++  +   + +   +S 
Sbjct: 359 SGKARQVPGSKRKGVSWPYSALGVVQMNKQEYQKSVVSFLSALRISPDDYYSYVGLGESY 418

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            +  +   A       +    +P    ++     E+                    +  +
Sbjct: 419 HNSGRYNSASR----AFNYAENPGDGIVFKKTEDES------------------WFTKYM 456

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370
           ++ +  E+   D+A A     +   P++    I LL   +E+ 
Sbjct: 457 LANVNRELSEFDEALAGYEAVLAKRPKEFGVSIALLQTLVERG 499



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 14/176 (7%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
             A R +  A E  + +L+       A+  +        +   A ++  KAL   P    
Sbjct: 152 YQAPRNHQEAKEIFQGVLKRKPKFTAALIGIGLVLEEEEEYEQAFQFLEKALQQDPSNGR 211

Query: 190 VTEAVVQQYVLAKEWSRAIT---------FLNQKKKNAKEWNRNR----AILLIARSLEN 236
           +         LA ++   +           L+  K+  +E          + +       
Sbjct: 212 IGAESAWCQALAGDYKTGLEKLQGYLDYPQLDASKQRGRELRAQTLYRIGVCIWELDTSK 271

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP 291
           A + D   +Y   + ++K   N               NK RK A    +K ++++P
Sbjct: 272 AARKDRNGAYAKLLAAIKANPNYAPPYTLLGIFYEDYNKDRKRARQCFQKAFELSP 327


>gi|310764776|gb|ADP09726.1| Probable fimbrial biogenesis protein [Erwinia sp. Ejp617]
          Length = 243

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 58/164 (35%), Gaps = 7/164 (4%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             L++   + A   L   + Q P      + ++     + GD + A+ +  +AL  +P  
Sbjct: 36  AYLSKGNMDAARRNLQRALSQAPDDYRVQL-AMARYQQQTGDRSRAEHHYHRALARAPSN 94

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +V            ++  A    +  +K++    R  ++          + G    +  
Sbjct: 95  GYVLNNYGAFLCGLGQYDAAQRQFSLARKDSANGLRADSVENSGYC--FLNAGQQEKARQ 152

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290
             +++++            A++     K R++   +L  +++ N
Sbjct: 153 ALVDAVQTDPT--KGLPMLAEAARRLGKGRRSESRLLLDVYQHN 194


>gi|291613670|ref|YP_003523827.1| response regulator receiver protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291583782|gb|ADE11440.1| response regulator receiver protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 559

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 21/208 (10%)

Query: 125 LEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L+ +  LA        +  E  +          +  +      + ++++A+  A + +  
Sbjct: 195 LKAEALLALNDTTDLLKTYEQALAMRDNVPWVKI-GIARARMLLNEVDAAEEMAKQIVAD 253

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P      E + +   + K+   A   + Q  K      R R+    A  L   D+    
Sbjct: 254 NPSYVAAYELLAEIRRMQKDEEGAYQLMEQSAKILPTAKRFRSNAESAFLLGKLDE---- 309

Query: 244 ASYHDAIESLKLCDNSI---MASICA-AKSLISQNKKRKAEVILEK---------IWKVN 290
            +   +  +++L   SI        + A+        + A   LEK          + ++
Sbjct: 310 -AKKYSESAIRLASGSITERPDDYLSLAQIQTDLGDPQGAIHTLEKSARKFEEKGSFGIS 368

Query: 291 PHPEIANIYTHLLSENTVGK-LKRALRL 317
            +  +A  Y     +    + L+R+ RL
Sbjct: 369 KNAILAQAYFDAGDKAAAKRLLERSQRL 396


>gi|167570811|ref|ZP_02363685.1| TPR domain protein [Burkholderia oklahomensis C6786]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  E  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +            A+           
Sbjct: 143 LGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGRTDEAVAHFRAALAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    +      +L L     +A    A +L +  + R A
Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAEALPAFESALALQPRFPLALFGLANALAALGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  A  L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPAHSLAQMH 312


>gi|149186441|ref|ZP_01864754.1| TPR domain protein [Erythrobacter sp. SD-21]
 gi|148830030|gb|EDL48468.1| TPR domain protein [Erythrobacter sp. SD-21]
          Length = 654

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 87/286 (30%), Gaps = 20/286 (6%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L   Q AL    +    E    +L        A+Y     +  +   + A+RY      +
Sbjct: 8   LSAAQKALQAGDFARGRELAGDLLTEDGKDGEALYMAAVAARYLKQYDDAERYLASLHGV 67

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--DKGD 241
            P+     +          + + AI+      +         A+    R++     + G 
Sbjct: 68  MPEYGRAWQEAGHLAKARGQSAEAISAYANATRFNP------ALEASWRAMAPLLTETGR 121

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIA 296
           +  + +   ++ ++    +   + A      + +  +AE I     + +P        +A
Sbjct: 122 VAEAQNAIAQADRIAG--LPKELVAVTHHFHEGRLLRAEEICRHYLRSHPKNVEGMRLLA 179

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            I   L        L            +++  +            ++A  +A    +  P
Sbjct: 180 KIGMQLGVLEDAEFL--LDSAAAFEPHNIQVRLDYIDALRRRQKFERAREEAEALYRQDP 237

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHA--MPDPLWISDDGY 400
              +F     IE   + + DK       A+ A    DP  ++  G+
Sbjct: 238 ENPLFQSHLAIESMQTGDYDKAFE-LFDAVLARLPNDPATLTSRGH 282


>gi|148977389|ref|ZP_01813989.1| hypothetical protein VSWAT3_22717 [Vibrionales bacterium SWAT-3]
 gi|145963341|gb|EDK28606.1| hypothetical protein VSWAT3_22717 [Vibrionales bacterium SWAT-3]
          Length = 1087

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 11/178 (6%)

Query: 131 LAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           LA  +   A       + +  T+     A+ +L+ E  +    + A     +AL +    
Sbjct: 225 LARGELGDAERLYRKAIALDNTQPYAFVALAALFLEEKKYSSADKAYS---QALSLDSLN 281

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDM 242
                  +   +   +W  A    N     QK    ++ +   + +++ R  +     D 
Sbjct: 282 GSALRGRLDVEIYQGDWHEAREVANQYSSAQKLVVEEKISSIDSEIILIRLRDAIANNDD 341

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
            A        ++L  +S    +  A  + S   K +A+ ++E   K    PE+   Y 
Sbjct: 342 KAMAESVEALIQLTPSSPWLRLDIAGVVRSMGNKSRADQLMEDWAKDTSDPEMKFAYA 399


>gi|116620862|ref|YP_823018.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224024|gb|ABJ82733.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 388

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 8/219 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A    S          E    L   Q          A    +  + +      A 
Sbjct: 171 GENEKAAADLSQAVALRPDFAEAWSDL--GQTCKLRMDDAGALAAFQRAVMLSPDDGVAQ 228

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ---- 213
             L  E    G  + A  +  +A  ++P+      ++          + A     +    
Sbjct: 229 TRLGAEYLSQGKAHEAVPHLQEATRLNPENQTALYSLQSALRDDGRIAEAQEVKERLVEL 288

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            +K++    N  RAI L  +       G +  +      +L L    +      A +L+ 
Sbjct: 289 LRKRDRASENALRAIQLNNQGAALEKDGKLGEALEKYQSALALAPEHVGIRTNVAAALLR 348

Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310
             K ++    L +  +  P +P +       LS+    +
Sbjct: 349 LGKWKEGIAELRESLRREPDNPALQTALKDALSKTPAKR 387


>gi|73669941|ref|YP_305956.1| hypothetical protein Mbar_A2461 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397103|gb|AAZ71376.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 398

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 58/172 (33%), Gaps = 11/172 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+     A   + KAL  +P       +          +  AI   +   K      R  
Sbjct: 170 RLKQHEKALGDSEKALSSNPKLGGAWHSKGSVLADLGRYEEAIEAYDAALKLNPNLAR-- 227

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             +L+ +          + +      +LK+  ++    I      +   K ++A     K
Sbjct: 228 --VLVGKGFALYSLDRPVEAMIAYDAALKINPDNAKNWIGKGLIHLKLGKFKRAIAACSK 285

Query: 286 IWKVNPHPEIANI-YTHLLSENTVGK----LKRALRLEEINKESVESLVIVS 332
              +   P+ ++  Y   ++ +++ K    L    R   I+ +++E+   ++
Sbjct: 286 AISIK--PDSSDAWYCKGMAFSSLDKNGEALGALERALRIDPDNIEARKALA 335


>gi|262304999|gb|ACY45092.1| acetylglucosaminyl-transferase [Idiogaryops pumilis]
          Length = 287

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 6/165 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A + ++   +    H + L  L    I   +     A       L++      A 
Sbjct: 34  GMVREAEECYNTALRLCASHADSLNNL--ANIKREQGLIEEATRLYLKALEVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ ISP        +        +   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNEALLHYKEAIRISPTFADAYSNMGNTLKEMGDVQAALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
              +    A      +  + D G++  +      +LKL  +   A
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAVISYRTALKLKPDFPDA 192



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A    N   +       + A  L   +    
Sbjct: 10  KRAIELQPNFPDAYCNLANALKEKGMVREAEECYNTALRLCA----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  +++P    A+
Sbjct: 66  EQGLIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +    L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMGDVQAALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAVISYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|119964111|ref|YP_948835.1| O-antigen polymerase family protein [Arthrobacter aurescens TC1]
 gi|119950970|gb|ABM09881.1| putative O-antigen polymerase family protein [Arthrobacter
           aurescens TC1]
          Length = 601

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 82/306 (26%), Gaps = 79/306 (25%)

Query: 2   LRLIRYFFVISLVICSFIIVSH--YPEDVSIT-----------------WGNRLYRTSPF 42
           LRL  +  + ++    F +++H   P  V++                     R       
Sbjct: 348 LRLFLFGALAAVCGYGFALMTHFTSPGTVALVCVLAGAILATAPVQEKAAAGRRTTVPAP 407

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102
           V  S+    L   IL  +        P      L  R                   NI  
Sbjct: 408 VRFSVAGLALVGAIL--SGVAASAELPMKSGTDLSAR------------------GNIQQ 447

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQI---ALAERQYNIAHEKLEMMLQIPATREFAVYS 159
           A K          +  +  V LL  Q       +     A                    
Sbjct: 448 ATKAFEAAKALRPWDQD--VDLLAAQAFAVRAVQGDSPAA-------------------- 485

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
                      ++A  +A+ A++ +  +     A+    +   +   A   L+++   + 
Sbjct: 486 -----------DAAVTWASAAVERNRSSMEALSALAIGQLGTGDVEAAEKTLDRQIDRSP 534

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 +   + R L  A+  DM  +  D   +  L      A    ++  +   +  KA
Sbjct: 535 ----WTSEPYLLRGLAKANGQDMAGAIADVESAAALTPKPKRALSILSELYVVSGQPEKA 590

Query: 280 EVILEK 285
             + EK
Sbjct: 591 AEVEEK 596


>gi|71909710|ref|YP_287297.1| response regulator receiver:tetratricopeptide TPR_4 [Dechloromonas
           aromatica RCB]
 gi|71849331|gb|AAZ48827.1| Response regulator receiver:Tetratricopeptide TPR_4 [Dechloromonas
           aromatica RCB]
          Length = 572

 Score = 43.0 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 72/248 (29%), Gaps = 34/248 (13%)

Query: 134 RQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            + + A E    +L     R    A   L       G L+ A++ A +    +P+     
Sbjct: 201 GRTSEAEEVFRRVL---EGRVVPWAKMGLAMALRDRGALDEAEQLAEQVTQDTPEYLSAY 257

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           + +   +        A   L +   +A   N  R  L+   +  N D      +Y   IE
Sbjct: 258 DFLASVHEAQGRLHEAQKTLQRG-ADASPHNTVRQRLVGDVAARNKDLLAAEKAYGKVIE 316

Query: 252 -----SLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWKVNPHPEIAN-----I 298
                SL+  D+        ++ L+ +      RK    +++ W+ +   E+A      +
Sbjct: 317 RSRGSSLRTVDDF----ANLSRVLVERGDVAASRKIATEMKREWRGDKQAELAAMVTESL 372

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVES-----------LVIVSKIALEMGSIDQAHAK 347
             H        +      L        E+            V ++      G  D A   
Sbjct: 373 CLHAEGATEKARNLVDQALALQKTIVAEAVGKDRHTSQRLAVDLAHACYAAGKEDDAGRI 432

Query: 348 AMLAMKIA 355
                   
Sbjct: 433 MRQVAAEN 440


>gi|332992017|gb|AEF02072.1| tetratricopeptide TPR_2 [Alteromonas sp. SN2]
          Length = 928

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL-YFESCRIGDLNSAQRYATKAL 181
           L     L + +++ A    E + +I A   +   + +L Y E     DL  A  YA +AL
Sbjct: 784 LLADFYLTQDEHDKAKTHYEFLSKIDALFDKATVLNNLAYIEMK--NDLPKALEYAEEAL 841

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +SP+ P + +           ++ A+  L + 
Sbjct: 842 SLSPNTPQILDTYGWILARQGNYTEALPNLRKA 874



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +  V A + + A T LN  K  A   N     L  A+    A++ D +     AI++   
Sbjct: 651 KLQVSANDLTGARTSLNDAKAIAP--NSVTIALEEAKLNLRANQLDGLEKEIKAIQAK-- 706

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKR 313
             NS    + A         K+KA     + +K++PH  I  A+++    SE+       
Sbjct: 707 APNSPEVYLLAGNFYNVTKDKQKAFSAFSRAFKLDPHTSIHAASLFQSASSESM---FIA 763

Query: 314 ALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
              L     E    +     +++   L     D+A        KI 
Sbjct: 764 FEALMHPYVEKYPNAYFHKRLLADFYLTQDEHDKAKTHYEFLSKID 809


>gi|225849022|ref|YP_002729186.1| TPR domain protein [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644166|gb|ACN99216.1| putative TPR domain protein [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 329

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
            +     E+     K+ ++ G  ++A      A+KI P+ KE + LLAQIE  + ++   
Sbjct: 72  RLKPTYAEAYFERGKVYIQKGEFEEAKKDLEEAVKIDPKIKEAYSLLAQIELMHGNDQKA 131

Query: 378 ILY 380
           + Y
Sbjct: 132 MEY 134


>gi|222053753|ref|YP_002536115.1| methyltransferase type 11 [Geobacter sp. FRC-32]
 gi|221563042|gb|ACM19014.1| Methyltransferase type 11 [Geobacter sp. FRC-32]
          Length = 686

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 171 NSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRA 226
            +A+  A  ALDI+P      + + +    L +    AI       K      E+  N  
Sbjct: 33  EAAKSLAA-ALDIAPGFAAAHDKLGLILQCLGRR-EEAIAHYECAAKLSPGRPEFRNNLV 90

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             L  ++       D+  + +  I++L+L  + +       +  +++ +++KA
Sbjct: 91  SALAEQARHLLTVKDLAGAENTVIQALELTPDLVDLHQTLGEIYLARGEQQKA 143


>gi|254415674|ref|ZP_05029433.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196177624|gb|EDX72629.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 297

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 9/204 (4%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             + Q     +  E++LQ     + A+  L     R+GD+  A        +++PD P  
Sbjct: 53  EQQDQLEEQAKGYELVLQREPQNQTALRGLLEAKLRLGDVEGAIAPLETLAELNPDQPEY 112

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYH 247
              + Q      +   A     Q   +        +  A L I ++   A  G +  +  
Sbjct: 113 GVLLAQAKEQTGDREGAAQAYRQILASQPGDINALKGLAALYIQQNRPEAAIGLLQETIK 172

Query: 248 DAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTH 301
           +A +  +     +  S   +   +  +SQ +  +   I +++ + NP    P +A     
Sbjct: 173 NAGQQNQTQPGRVDVSSVKLLLGEVYLSQQRFTETLTIYDELIEENPQDFRPVLAKALIL 232

Query: 302 LLSENTVGKLKRALRLEEINKESV 325
                T            +  +  
Sbjct: 233 RQQGKTEEAKPLFTTAVSLAPQEY 256



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 59/201 (29%), Gaps = 30/201 (14%)

Query: 81  YDKGYK-----------ALYTGLM--SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             KGY+           AL  GL+   +   ++  A         +          LL  
Sbjct: 61  QAKGYELVLQREPQNQTAL-RGLLEAKLRLGDVEGAI-APLETLAELNPDQPEYGVLL-A 117

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS--- 184
           Q          A +    +L        A+  L     +     +A     + +  +   
Sbjct: 118 QAKEQTGDREGAAQAYRQILASQPGDINALKGLAALYIQQNRPEAAIGLLQETIKNAGQQ 177

Query: 185 ----PDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
               P    V+   +   + Y+  + ++  +T  ++  +   +  R     ++A++L   
Sbjct: 178 NQTQPGRVDVSSVKLLLGEVYLSQQRFTETLTIYDELIEENPQDFRP----VLAKALILR 233

Query: 238 DKGDMIASYHDAIESLKLCDN 258
            +G    +      ++ L   
Sbjct: 234 QQGKTEEAKPLFTTAVSLAPQ 254


>gi|317494478|ref|ZP_07952891.1| cellulose synthase operon protein C [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917408|gb|EFV38754.1| cellulose synthase operon protein C [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 1146

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 98/317 (30%), Gaps = 54/317 (17%)

Query: 93  MSIAAHNIPLAR-----KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           ++I + +  L           Y   +   + +    L    +A+A +    A    +  L
Sbjct: 340 LAIQSGDKALKANQLDSAQQKYQQARGIDNTDSYAPLGLGDVAVARKDDASAERYYQQAL 399

Query: 148 QIPATREFAVYSL--------------YFESCRIGDLNS--------------------- 172
           ++ +T   AV  L              Y +S   G  N+                     
Sbjct: 400 RLDSTNSSAVRGLVGIYQRQSPAKALAYLDSLSRGQRNAMQGAINSIQSDVLQQQAQALE 459

Query: 173 -------AQRYATKALDISPDAPWVTEAVVQQYVLAK---EWSRAITFLNQKKKNAKEWN 222
                  A     +AL +SP+  W+T  + +    A    +  RA + L Q+     +  
Sbjct: 460 QQQQWAGAASKLQQALKLSPNDVWLTYRLAKDLHAAGRTDDADRAFSTLAQQLPGDPQQV 519

Query: 223 RNRAILLIARSLENADKG--DMIASYHDAIESLKLCDNS-IMASICAAKSLISQNKKRKA 279
              A+ L +   + A     D +       +  +L D      ++  A+ L     + +A
Sbjct: 520 YAHALYLSSTDRDRAALALVDSLPKSKWDTDIHELSDRLHFGETLQKAQDLRDAGHEDEA 579

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              L +    N   ++      +  E+    L     +      +  + +   +  +  G
Sbjct: 580 ITYLRQQ-PANTQVDLTLADWAMEREDYTVALAGYRDVLLREPNNASAHLGEIEAFIAQG 638

Query: 340 SIDQAHAKAMLAMKIAP 356
            ++QA ++     +  P
Sbjct: 639 ELEQARSQLQALQQEKP 655


>gi|296448615|ref|ZP_06890484.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
 gi|296253865|gb|EFH01023.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
          Length = 285

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 62/195 (31%), Gaps = 13/195 (6%)

Query: 168 GDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           GD  +A        ++    P           +    ++  AI   +Q  ++        
Sbjct: 51  GDPKAASANIESLSEVIRRNPSAEAFNTRGVAHAKVGQFQEAIADFSQAIQSDPNS---- 106

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A     R+L     G    +  D   ++ +  N   A I  A  L +Q    +A + L+ 
Sbjct: 107 AAAFTNRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQGNLDEALIDLDA 166

Query: 286 IWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             ++N  PE A  +      H    + +  +       + +  +        +  + +G 
Sbjct: 167 AIRLN--PESAQAFHARGLIHQKRGDNLRAVTDFDNAIDRDPFAAAPYQARGESLVALGK 224

Query: 341 IDQAHAKAMLAMKIA 355
            D+A      A+ + 
Sbjct: 225 YDKAIEDFNAALNVD 239


>gi|294138897|ref|YP_003554875.1| cellulose synthase operon C protein [Shewanella violacea DSS12]
 gi|293325366|dbj|BAJ00097.1| cellulose synthase operon C protein, putative [Shewanella violacea
           DSS12]
          Length = 1195

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 96/297 (32%), Gaps = 45/297 (15%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q A  E +  +A E +   LQ   T       L       G  N A +    AL   PD 
Sbjct: 228 QRANQEGKKRLARELI---LQKDPTYRAKRKGLAL--LDEGKNNQAAKQLRYALTTRPDD 282

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIA 244
           P +  A+   Y+     ++A+ +  + +   K+    ++ R+++ ++       +GD   
Sbjct: 283 PELLGAIGTIYLRGGNQTQALAYFKKAQELDKDPDAASKWRSLIKVSSYWAYLKQGDTAL 342

Query: 245 SYHDAIESLKL---CDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNP------ 291
             +   ++  L         A+  A    A+  + Q + ++AE   +     +       
Sbjct: 343 KENRYTDAKHLYEKSIKITPAAPDAYNGLAELALMQKQYKQAERYYQLALNRDQNNNSAL 402

Query: 292 ---------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                      E+              +L    +++ +  +     +   ++AL  G +D
Sbjct: 403 RGRLNVALAQGELGTAIKLAEHYTPQQQLAINGKIQSLRSDQASQAI---ELALSAGDMD 459

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANS------HNTDKILYWTQSALHAMPDPL 393
           QA       + + P      L A I              D +L W      A  DP 
Sbjct: 460 QAKRSVSRLLALKP--SSPWLRADIADTLRILGNPKQADDLMLAW----DQASSDPQ 510



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 7/101 (6%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++AL ++QY  A    ++ L        A+      +   G+L +A + A      +P 
Sbjct: 372 AELALMQKQYKQAERYYQLALNRDQNNNSALRGRLNVALAQGELGTAIKLAEH---YTPQ 428

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
                   +    L  +  +A   +             R++
Sbjct: 429 QQLAINGKI--QSLRSD--QASQAIELALSAGDMDQAKRSV 465


>gi|225431027|ref|XP_002273357.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297735304|emb|CBI17666.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 27/184 (14%)

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           ++K++           LIA S++   KGD   +      +L    N + A +   ++L+ 
Sbjct: 380 RRKQHQIPIESLSPRDLIALSVQILSKGDKDGAIPFIRMALDKDPNYVRALVVMGQTLLQ 439

Query: 273 QNKKRKAEVILEKIWKV-----NPHPE------IANIYTH---LLSENTVGKLKRALRLE 318
           + +  +A   LE+         +P  +      +A+ +     +    T   L    R+ 
Sbjct: 440 KEQVEEASDYLERAVTKLFLIGHPTEDEVDLMILASQWAGAACVRQGKTAEGLVHLERIA 499

Query: 319 EIN-KESVESL-------VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            +   +  +S        ++++      G   +A      A    P  + +     +E+ 
Sbjct: 500 NLKEPDEPKSKAHYFDGLLLLASTLYREGRNAEAAKHLRKAAAYNPAYKEY-----LEEC 554

Query: 371 NSHN 374
              +
Sbjct: 555 ERED 558


>gi|110597764|ref|ZP_01386048.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM
           13031]
 gi|110340671|gb|EAT59151.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM
           13031]
          Length = 542

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 68/230 (29%), Gaps = 39/230 (16%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-- 186
               E +     E     ++I         +L     + GD + A     +A+ I+PD  
Sbjct: 330 AYGREGETVRKIEAYRQAVRINNDFALGWINLGIAYVQNGDFDKAVDAYQQAVRINPDDA 389

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           + W    +V     A + ++A+       + A E  + R  L +  +    D        
Sbjct: 390 SVWFNTGLV--CRDAGQAAKAVDAFEHAVRIAPENAQYR--LKLGEAYGLID--QRARQI 443

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               E+L++  +                         +  W       +  +Y  +    
Sbjct: 444 EAYNEALRIKQDY------------------------DDAWVS-----LGVVY-GIAGRE 473

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +      L  IN     +L  + K  LE  + ++A        ++ P
Sbjct: 474 AEEREAYLKAL-RINPGHNAALFNLGKDYLEHNNREEAREIYSRLKRLNP 522



 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P +      +   ++   + + AI  L    +   ++    A L IA   E    G+ + 
Sbjct: 284 PSSSDAWGYLGFAHLQKGDLALAIDALQNAIRIRPDYAHYWADLGIAYGRE----GETVR 339

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-- 302
                 +++++ ++  +  I    + +      KA    ++  ++N  P+ A+++ +   
Sbjct: 340 KIEAYRQAVRINNDFALGWINLGIAYVQNGDFDKAVDAYQQAVRIN--PDDASVWFNTGL 397

Query: 303 ---LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
               +      +        I  E+ +  + + + 
Sbjct: 398 VCRDAGQAAKAVDAFEHAVRIAPENAQYRLKLGEA 432


>gi|296136520|ref|YP_003643762.1| Tetratricopeptide TPR_2 repeat protein [Thiomonas intermedia K12]
 gi|295796642|gb|ADG31432.1| Tetratricopeptide TPR_2 repeat protein [Thiomonas intermedia K12]
          Length = 334

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 29/109 (26%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A    E  L+       A+  L   +    D   A  +  +A   +P        + Q
Sbjct: 225 EAARTAYEAALKRWPKAWIAMMGLGNLAYARKDYPQAAIHFAEAARANPSDGDPMNNLAQ 284

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             + A +W  A   +    +  +             +   A   D   +
Sbjct: 285 ALLAAGDWKAAQGAIEVALRLGQPHPEAYRSTAAEIAKARAAALDPTQA 333


>gi|229916939|ref|YP_002885585.1| hypothetical protein EAT1b_1213 [Exiguobacterium sp. AT1b]
 gi|229468368|gb|ACQ70140.1| hypothetical protein EAT1b_1213 [Exiguobacterium sp. AT1b]
          Length = 304

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKE 203
            + +   T E  + +    S R GDL + +R A  AL +  P  P     +++ ++   +
Sbjct: 210 QLSEYDETDETYLRTKARLSFRSGDLETGERLAE-ALTLYHPKVPDGYVMLIEHHMTNGD 268

Query: 204 WSRAITFLNQKKKN 217
           W+     L++  ++
Sbjct: 269 WASLRPTLDRLHQH 282


>gi|167903761|ref|ZP_02490966.1| TPR domain protein [Burkholderia pseudomallei NCTC 13177]
 gi|167912023|ref|ZP_02499114.1| TPR domain protein [Burkholderia pseudomallei 112]
 gi|217421212|ref|ZP_03452717.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
 gi|217396624|gb|EEC36641.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|78223878|ref|YP_385625.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
 gi|78195133|gb|ABB32900.1| TPR repeat protein [Geobacter metallireducens GS-15]
          Length = 247

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 33/181 (18%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ PD       +   Y+  + W  A+        +    N   A + +  +    
Sbjct: 86  RRAIELKPDYSEARNNLGVNYLEMQRWDDAVAQFTLVLADLFFINHEDARINLGLA--YL 143

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            KGD   S     +++     +I+A +   +   + ++                  ++A 
Sbjct: 144 GKGDYPKSLDILRQAVATSPQNIVARVGLGRVYFAMDRN-----------------DLA- 185

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                        ++   +  E+NK        ++   L+      A      A++IAP 
Sbjct: 186 -------------IQEFTKAVELNKNYQNGYYYLALAHLKGKDYVSAADAFREAIRIAPD 232

Query: 358 K 358
            
Sbjct: 233 S 233


>gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 809

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 89/308 (28%), Gaps = 54/308 (17%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-------- 145
           +IA +   LA ++      +   +   L   L  +    + + + A    E         
Sbjct: 289 AIAYYEAALAIRL--RTEGEKGENVAALYNNL-GEAYRHKGECDKAVAFYEKDLAITVET 345

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQ 197
           + +   +       L       GD + A     KAL I         P        +   
Sbjct: 346 LGEKHPSTATTYNGLGTAYGDKGDYDRAIECFEKALAIYVEMLGEKHPSTASTYNNLGSA 405

Query: 198 YVLAKEWSRAITFLNQKK---------KNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           Y    ++ +AI F  +           K+    +    + +   S    D+   +     
Sbjct: 406 YYSKGDYDKAIAFYEKDLAITVETLGEKHPGTADSYLGLGVAYYSKSENDEAIQLYEKAL 465

Query: 249 AIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKV------NPHPEIANIY 299
           AI+   L +     +        +  S+ +  KA  + EK   +        HP  A+ Y
Sbjct: 466 AIKVETLGEKHPSTAETYNNLGNTYYSKGEYDKAIQLYEKALAITVETLGEKHPSTADTY 525

Query: 300 THLLS---------------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +L +               E  +    +   L E +  +  +   +     + G  D+A
Sbjct: 526 NNLGNAYSDKGEYDKAIVFYEKALAI--KVETLGEKHPSTASTHNNLGTAYADKGDYDKA 583

Query: 345 HAKAMLAM 352
                 A+
Sbjct: 584 IQHHETAL 591


>gi|325299985|ref|YP_004259902.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
 gi|324319538|gb|ADY37429.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
          Length = 289

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 73/215 (33%), Gaps = 18/215 (8%)

Query: 164 SCRIGDLNS-AQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKN 217
           +C   D  + A++   +AL + P       A++            +   AI         
Sbjct: 47  ACAQKDSLARAEQLFREALKLDPKN--ARNALLFSNLGTVLKRQGKADEAIEAYTMALNI 104

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                     +L+ R+    DKG +  +Y D    + L      A +  A   + + + +
Sbjct: 105 TPYA----TAILLNRAALYLDKGLLEKAYIDYCNVIDLIPEEKEARLFRAYIYMQRRQYK 160

Query: 278 KA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           +A     V+L K  K  P   I  +         +    R  +L     E    L + + 
Sbjct: 161 EARIDYNVLLGKDMKNKPAR-IGLVMLDQKEGKYIAARDRLNQLVAEYPEDASLLKMRAN 219

Query: 334 IALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
           I LE G  D A      A  + P   ++++++  I
Sbjct: 220 IELEQGFADAALLDLEAASALEPDDADVYVMMGDI 254



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              ++  A   LNQ      E     A LL  R+    ++G   A+  D   +  L  + 
Sbjct: 189 KEGKYIAARDRLNQLVAEYPE----DASLLKMRANIELEQGFADAALLDLEAASALEPDD 244

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEIAN 297
               +      + Q K+R+A    E   ++  P P++A 
Sbjct: 245 ADVYVMMGDIYVQQKKRRQAREAYEHAIELGIPAPQLAE 283


>gi|304393273|ref|ZP_07375201.1| TPR repeat-containing protein [Ahrensia sp. R2A130]
 gi|303294280|gb|EFL88652.1| TPR repeat-containing protein [Ahrensia sp. R2A130]
          Length = 292

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 13/182 (7%)

Query: 85  YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           Y+A     L+  +  +  LAR    Y +      N    Y+    +     +   A    
Sbjct: 111 YQAYSNRALLYSSQGD--LARAQADYNAALRINPNFSEAYVGRGDVYRLAGRNQQAKSDY 168

Query: 144 EMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +  +QI  T   A Y    L+  + + G    A    +KAL      P    A    Y+ 
Sbjct: 169 DRAIQIGTTDPRAYYGRGLLFQRARQHG---PAIEDFSKALSFEDKQPQPYNARGLSYMA 225

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   A+  +N   K   ++    A     ++L   ++GD   ++     +  L  +  
Sbjct: 226 QNQMQNALDDVNTALKLDADY----AEAWTNQALIYENRGDKKRAFKSYARAASLKPSYA 281

Query: 261 MA 262
            A
Sbjct: 282 PA 283


>gi|254481862|ref|ZP_05095105.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037991|gb|EEB78655.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 402

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 101/349 (28%), Gaps = 60/349 (17%)

Query: 47  ILYFFLFAWILLFAVSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102
           +   F  A ++ + + R       S P +           KG   L  G           
Sbjct: 6   VFALFFVAIVIGWYLGRRGQAKSASAPDLPGQYY------KGLNYLLDG----KPDGAVD 55

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A      V+ +    +  L  LL  +      + + A    + +L  P+     V+  + 
Sbjct: 56  AFINALEVNSETLETHIALGNLLRKR-----GEVDRAIRIHQNLLARPSLPRAQVHQAHL 110

Query: 163 ESCRIGDLNSAQRYATKAL----DISP-DAPWVTEAVVQQYVLAKEWSRAITFL------ 211
           E  R          A + L      SP         ++  Y   +EW +AI         
Sbjct: 111 ELARDYISAGLLDRAERLLLDLVAESPIQRRDSQLHLLDIYQSEREWQQAIDIAVELLPR 170

Query: 212 ---------NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
                        +  +      +      + E     D+  +     E+L +   S+ A
Sbjct: 171 KSLLGGTAGTAADEPGQSVPVILSHYYCELAAERRQDNDLQGARQLLQEALAMDKQSVRA 230

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALR 316
           S+          + ++A   L ++ + +P       P +   Y  L  E ++        
Sbjct: 231 SMMLGDVEFDAGRFKQAIKALRRVRQQDPLYISESVPSLRACYRELGDEKSL-------- 282

Query: 317 LEEINK---ESVESLVIVSKIALEMGSID---QAHAKAMLAMKIAPRKE 359
           L  + +         ++++  A ++  +D    A    +  +   P   
Sbjct: 283 LAYVRECLDNHPSPPLLLA-AAEDIREMDGGSTAEQFLIEQLDKMPSLR 330


>gi|241998476|ref|XP_002433881.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes
           scapularis]
 gi|215495640|gb|EEC05281.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes
           scapularis]
          Length = 832

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 22/175 (12%)

Query: 196 QQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           + Y    ++  AI    +   K    +       ++  +      G+   +     E+L+
Sbjct: 606 RLYADEGKYKEAIRVYQEAVAKMPDHYQPQSLYNMMGEA--YFKLGEYTEAERWYKEALR 663

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HPEIANIYTHLLSENT 307
             ++ I A +  AK L   N+  +AE    +   + P       H      Y   LSE+ 
Sbjct: 664 AKNDHIPAHLTYAKLLSKWNRPSEAEQWFLRAKGLAPNDSSVYQH------YGQFLSES- 716

Query: 308 VGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             +   A  L     E+  +  E +   +    + G   +A A    A+K+ PR+
Sbjct: 717 -DRHTEAAELYLRAAELAPDEYEIIFNAANTLRQAGRNAEAEAFYYTAVKLRPRE 770



 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 58/225 (25%), Gaps = 31/225 (13%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L  +L         +   A    +  +       +   Y+L         L  A +    
Sbjct: 491 LANILSAH-----GKKAEAEWAYKKALTYRSNMADV-HYNLGILLQEQNRLEEALQSYKL 544

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-------NQKKKNAKEWNRNRAILLIAR 232
           A+   P        +     +      A+          +   K+ K     +   L   
Sbjct: 545 AIQFRPRLAMAHLNMGLVLGIMGRKDEAVDVYRHCAQLDSAGLKDPKTHESTKISALFNL 604

Query: 233 SLENADKGDMIASYHDAIESLKLCDNS-IMASI--CAAKSLISQNKKRKAEVILEKIWKV 289
               AD+G    +     E++    +     S+     ++     +  +AE   ++    
Sbjct: 605 GRLYADEGKYKEAIRVYQEAVAKMPDHYQPQSLYNMMGEAYFKLGEYTEAERWYKEA--- 661

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333
                         +++    L  A  L + N     E   + +K
Sbjct: 662 ----------LRAKNDHIPAHLTYAKLLSKWNRPSEAEQWFLRAK 696


>gi|124023751|ref|YP_001018058.1| SAM-binding motif-containing protein [Prochlorococcus marinus str.
           MIT 9303]
 gi|123964037|gb|ABM78793.1| SAM (and some other nucleotide) binding motif:TPR repeat
           [Prochlorococcus marinus str. MIT 9303]
          Length = 780

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 22/203 (10%)

Query: 133 ERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           +   N A +  +      L  P        +        G+++ A +   K++ + P   
Sbjct: 37  QGNINEAQKAYQEFINSGLSDPDV----FSNFALICQSQGEIDKAIKVYKKSVKLFPGHA 92

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           +   A +   +        +       + A     N A       L   +KG +  +   
Sbjct: 93  FSH-ANLGYLLFQ---IGMLDDAEVAIRQAIVIQPNLANAYSYLGLVLREKGRLTDAEDI 148

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305
             ++++L  +   A +   + L +Q K  +AE    K  ++    + A+IY +L      
Sbjct: 149 TRKAIELQPDLADAYVNLGQILQNQGKLDEAEHTTRKAIELQD--DSASIYLNLGGILQD 206

Query: 306 -----NTVGKLKRALRLEEINKE 323
                +     ++A+ L+    +
Sbjct: 207 QGNLTDAEANTRKAMNLQADLPD 229


>gi|148256896|ref|YP_001241481.1| SPINDLY family O-linked N-acetylglucosamine transferase
           [Bradyrhizobium sp. BTAi1]
 gi|146409069|gb|ABQ37575.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. BTAi1]
          Length = 739

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 83/274 (30%), Gaps = 12/274 (4%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           M+        A +      +     +E    L     A    +   A      +L +   
Sbjct: 1   MASNVG--SRAFQNARLQKKHRKQVDE---LLPRAVAAYRAGRPAEAQAICGQILALLPE 55

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A++ L   +   G L+ A++  TKA++  P        +       K +  A     
Sbjct: 56  HFDALHLLGVVALDSGQLDMAEQALTKAVEAEPRHAEALSNLGLALFNRKRYEEARKCQE 115

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                         + L          G    +      ++ L  +   A      +L+ 
Sbjct: 116 LAVALKPNL----VVALTGLGNTLMRLGRPEEAIVAHDRAIALKPDYADAYCNRGMALLP 171

Query: 273 QNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            N+  +A    ++   +NP H E         ++  +    L        I   + + L 
Sbjct: 172 LNRNAEANQNFDRALSLNPRHMEAMFGKGLASIILRHFDDALAAFDAALAIRPRAAQVLA 231

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              ++  + G  D A A    A+ I PR+E+ LL
Sbjct: 232 QRGRLHQQAGRFDPAMADFQAALSIDPRQEVALL 265



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 108/342 (31%), Gaps = 40/342 (11%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++++ +  + +A +  +   +    H E L  L         ++Y  A +  E+ + + 
Sbjct: 64  GVVALDSGQLDMAEQALTKAVEAEPRHAEALSNL--GLALFNRKRYEEARKCQELAVALK 121

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+  L     R+G    A     +A+ + PD           Y        A+  
Sbjct: 122 PNLVVALTGLGNTLMRLGRPEEAIVAHDRAIALKPDYA-------DAYCNRG---MALLP 171

Query: 211 LNQKKKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           LN+  +  + ++R           +  + L +        +      +L +   +     
Sbjct: 172 LNRNAEANQNFDRALSLNPRHMEAMFGKGLASIILRHFDDALAAFDAALAIRPRAAQVLA 231

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEIN 321
              +      +   A    +    ++P  E+A        ++ +N    +    ++ E N
Sbjct: 232 QRGRLHQQAGRFDPAMADFQAALSIDPRQEVALLGFAQLSVIRDNVAPAMDACRKVLEQN 291

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP------RKEIFLL--LAQIEQANSH 373
             S  +   + +   + G +  A      A+++ P        +IFLL  + + +     
Sbjct: 292 PASEVAWTWLGECFAKQGDLTTALQHFERALELKPDFGDAITAKIFLLDFMPETDFVQH- 350

Query: 374 NTDKILYWTQS-----ALHAM----PDPLWISDDGYLSSVWL 406
                  W        A         DP      GY+S+ + 
Sbjct: 351 -QAVRRQWWSRIGAQIARRPPPLRDRDPERRLTIGYVSADFR 391


>gi|187931399|ref|YP_001891383.1| hypothetical membrane protein [Francisella tularensis subsp.
          mediasiatica FSC147]
 gi|187712308|gb|ACD30605.1| hypothetical membrane protein [Francisella tularensis subsp.
          mediasiatica FSC147]
          Length = 385

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+++ +    ++L     I  + Y   + +   ++  + +    + I +  LF  IL   
Sbjct: 1  MIKVFKLIIAVALATLVGIWATKYHCYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60

Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83
          +       P +LF            ++
Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87


>gi|92113651|ref|YP_573579.1| tetratricopeptide TPR_4 [Chromohalobacter salexigens DSM 3043]
 gi|91796741|gb|ABE58880.1| Tetratricopeptide TPR_4 [Chromohalobacter salexigens DSM 3043]
          Length = 619

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 9/273 (3%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +     IPL   M +       F  E L  LL  +IA     Y  A      + +   + 
Sbjct: 53  ATTPGAIPLEDPMENAPPVARGFDAEGLSTLLLAEIAGQRGDYRRAARGYLEVNERYGSV 112

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A  +    +    D    ++ A +   ++ DA      +    V   +W  A+    +
Sbjct: 113 ALAERATL-AARYANDSALLEQAALRWQRLADDATTPHYVLASLAVQRGDWETALA--QR 169

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +  A+E +   A L      ++AD   ++A  HD I+      + + A +  A+   +Q
Sbjct: 170 LRIAAREPDAELAALAELAIEDDADLAPLMADLHDFIDEH---PDHLDAQLATAQLEAAQ 226

Query: 274 NKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
              + A+  L ++      P    +      L         + A +      +     + 
Sbjct: 227 GDIQTADARLARLSDNADAPADVWLTRSTIALHRGALSDARRYASQGLRQFPDDSRLRLT 286

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           + +  L  G I  AH      +          L
Sbjct: 287 LVQARLADGEIAAAHDDVERLLARHDDTASLRL 319


>gi|77407837|ref|ZP_00784590.1| TPR domain protein [Streptococcus agalactiae COH1]
 gi|77411719|ref|ZP_00788057.1| TPR domain protein [Streptococcus agalactiae CJB111]
 gi|77162227|gb|EAO73200.1| TPR domain protein [Streptococcus agalactiae CJB111]
 gi|77173584|gb|EAO76700.1| TPR domain protein [Streptococcus agalactiae COH1]
          Length = 408

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 4/115 (3%)

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A    EK  K +P   +  +  +L S   + + KR     +I     E  + +++I  E 
Sbjct: 19  ANKYFEKALKNDPEEILLELGAYLESIGFLPQAKRLYD--QIRPNYPEVAINLAQIVAED 76

Query: 339 GSIDQAHAKAM-LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           G I+QA      ++          L++A +       TD        A     DP
Sbjct: 77  GDIEQAFLYLDYISEDSQEYVSALLVMADLYDMEGL-TDVAREKLLLASKLSDDP 130


>gi|330798465|ref|XP_003287273.1| hypothetical protein DICPUDRAFT_151347 [Dictyostelium purpureum]
 gi|325082733|gb|EGC36206.1| hypothetical protein DICPUDRAFT_151347 [Dictyostelium purpureum]
          Length = 580

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 39/120 (32%), Gaps = 9/120 (7%)

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                       + +  +   A++  +KAL +SP        + +  V+   +  A+  L
Sbjct: 435 MALLG----MVLANQPEEREKARKILSKALSLSPHCTDTVLTLSKLNVVEGRFQEAVDIL 490

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           N +     E+     ++    +     K     +      +L++      AS   A+  +
Sbjct: 491 NNQL----EYQETD-LMHTEIATVYLTKDMHEEAMIHFNSALEINPQYEPASRGLARLEM 545


>gi|301064308|ref|ZP_07204742.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300441587|gb|EFK05918.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 407

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/161 (9%), Positives = 51/161 (31%), Gaps = 10/161 (6%)

Query: 203 EWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           +W +A     +             A  L+       +K D+  +     +++      + 
Sbjct: 171 DWEKAFATRQKIAMLENGSHEHILAHHLVEAGKVCQEKDDVGKARTLFNKAISTQKTCVD 230

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRAL 315
           A +        + + +KA  + +++ ++ P         +   Y  + +   V       
Sbjct: 231 AYLHLGDLHFRKQEYKKAIAVWKRVAEIAPQFTFLAYGRLEGAYNEMKNLEPVEDF--LK 288

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +N +   +   +++       ++ A  +   A+ + P
Sbjct: 289 ECARLNPD-AFTHTALARYLYNKNDMEGALREINNALSLDP 328


>gi|294340648|emb|CAZ89040.1| conserved hypothetical protein; putative exported protein; putative
           TPR repeat [Thiomonas sp. 3As]
          Length = 334

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 29/109 (26%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A    E  L+       A+  L   +    D   A  +  +A   +P        + Q
Sbjct: 225 EAARTAYEAALKRWPKAWIAMMGLGNLAYARKDYPRAAIHFAEAARANPSDGDPMNNLAQ 284

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             + A +W  A   +    +  +             +   A   D   +
Sbjct: 285 ALLAAGDWKAAQGAIEVALRLGQPHPEAYRSTAAEIAKARAAALDPTQA 333


>gi|291570877|dbj|BAI93149.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 748

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G++  A     +A+ ++P   W+ + +     L      AI    +      E    
Sbjct: 266 LATGEIEEAIANYREAIRLNPQLSWLYQKLGHALKLVGNIDEAIVSYEKAIALKPELIWL 325

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             IL    +    +K          IE+LK   + I A    +K L ++ 
Sbjct: 326 YDIL----AQLLTEKERWQEVQDLCIEALKRKPDFIKAYHHLSKILKNRG 371



 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 9/190 (4%)

Query: 116 FHNEYLVYLL---EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
            +      +L     QI   + ++  A +  E  ++I   + +  Y L          + 
Sbjct: 180 LNYPAQSDVLYHNLGQIFGQQERWEEAVKCYERAIEINPNQFYYYYGLAQVLKTQEKWSE 239

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
                 +A+ + PD  W+   +    +   E   AI       + A   N   + L    
Sbjct: 240 LIPVCRQAIALKPDVDWLYMNLGDSLLATGEIEEAI----ANYREAIRLNPQLSWLYQKL 295

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                  G++  +     +++ L    I      A+ L  + + ++ + +  +  K    
Sbjct: 296 GHALKLVGNIDEAIVSYEKAIALKPELIWLYDILAQLLTEKERWQEVQDLCIEALKRK-- 353

Query: 293 PEIANIYTHL 302
           P+    Y HL
Sbjct: 354 PDFIKAYHHL 363



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 93/294 (31%), Gaps = 42/294 (14%)

Query: 118 NEYLVYLLEVQI--ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
              ++  L  Q    L  R +  A    E  L+I +    +  +L       GD   A+ 
Sbjct: 11  QPEVIR-LHEQAVLYLNARNWAEAINCCEEALKIDSNFALSYQTLGTIRQLQGDYVGAEC 69

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
               AL I+P+   V   +   Y   + W+ AI    +  +   +       L    +  
Sbjct: 70  CYHSALKIAPNFAEVHANLGSLYAKNQRWNEAINAYERAIEIRPDMGGVYRNL----AKV 125

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVILEKIWK 288
               G+   +     +++      + A     K  ++            +A  I EK   
Sbjct: 126 FRQCGEPERATEYWCKAI-----LVSADGVRFKDYLNLGNELQQQQQLEEAIAIYEKGIL 180

Query: 289 VNP-------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             P       H  +  I+     E     +K   R  EIN         ++++       
Sbjct: 181 NYPAQSDVLYH-NLGQIF--GQQERWEEAVKCYERAIEINPNQFYYYYGLAQVLKTQEKW 237

Query: 342 DQAHAKAMLAMKIAPRKE-IFL-----LLA--QIEQANSHNTDKIL-----YWT 382
            +       A+ + P  + +++     LLA  +IE+A ++  + I       W 
Sbjct: 238 SELIPVCRQAIALKPDVDWLYMNLGDSLLATGEIEEAIANYREAIRLNPQLSWL 291


>gi|284051626|ref|ZP_06381836.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca]
          Length = 547

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G++  A     +A+ ++P   W+ + +     L      AI    +      E    
Sbjct: 65  LATGEIEEAIANYREAIRLNPQLSWLYQKLGHALKLVGNIDEAIVSYEKAIALKPELIWL 124

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             IL    +    +K          IE+LK   + I A    +K L ++ 
Sbjct: 125 YDIL----AQLLTEKERWQEVQDLCIEALKRKPDFIKAYHHLSKILKNRG 170



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPD 186
             LA  +   A     E +   P  +   +Y     + ++ G+++ A     KA+ + P+
Sbjct: 63  SLLATGEIEEAIANYREAIRLNP--QLSWLYQKLGHALKLVGNIDEAIVSYEKAIALKPE 120

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             W+ + + Q     + W        +  K   ++ +    L
Sbjct: 121 LIWLYDILAQLLTEKERWQEVQDLCIEALKRKPDFIKAYHHL 162



 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 6/168 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           ++  A +  E  ++I   + +  Y L          +       +A+ + PD  W+   +
Sbjct: 1   RWEEAVKCYERAIEINPNQFYYYYGLAQVLKTQEKWSELIPVCRQAIALKPDVDWLYMNL 60

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               +   E   AI       + A   N   + L           G++  +     +++ 
Sbjct: 61  GDSLLATGEIEEAI----ANYREAIRLNPQLSWLYQKLGHALKLVGNIDEAIVSYEKAIA 116

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           L    I      A+ L  + + ++ + +  +  K    P+    Y HL
Sbjct: 117 LKPELIWLYDILAQLLTEKERWQEVQDLCIEALKRK--PDFIKAYHHL 162


>gi|167563649|ref|ZP_02356565.1| TPR domain protein [Burkholderia oklahomensis EO147]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  E  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +            A+           
Sbjct: 143 LGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGRTDEAVAHFRAALAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    +      +L L     +A    A +L +  + R A
Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAEALPAFESALALQPRFPLALFGLANALAALGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  A  L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPAHSLAQMH 312


>gi|163802571|ref|ZP_02196463.1| short chain dehydrogenase [Vibrio sp. AND4]
 gi|159173654|gb|EDP58473.1| short chain dehydrogenase [Vibrio sp. AND4]
          Length = 1253

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 95/295 (32%), Gaps = 42/295 (14%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            ++  A       +++  T+ +A  SL        +  +A +   +AL +          
Sbjct: 401 GEFKQAESLYHKAIRVDTTQPYAFTSLGALYLSQNNYLAADKAYIQALKLDQLNGSALRG 460

Query: 194 VVQQYVLAKEWSRAITFLNQ-----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +   +  ++W  A     +     K+  A++ N  ++ +++AR      + D       
Sbjct: 461 RLDVRIEQQDWVGAELIAQRFSPAQKQVVAEKINGIQSEIILARLRTAIAQNDQAVMQSA 520

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
               + L   S    +  A  + S   K++A+ ++ K  K +  PE+   +   L++++ 
Sbjct: 521 VEALIALKPTSPWLRLDVASMVRSMGNKQRADALMAKWAKSSSDPEMKFAHALYLAKDSK 580

Query: 309 GKLKRALRLEEINKESVESLVI------VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             +     LE +     E  +       ++++ L+    D           +        
Sbjct: 581 V-VAAISELESV----PEKALTPSMQRNLTRLKLDAELQDIQRRYLEEPQSVQ------- 628

Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL-----------SSVWL 406
             A++         ++       + A     W+  D  +           S  W 
Sbjct: 629 --AKLHALEQDYQGQVQA-LARLVGA-----WVEADQVVEAERIYRSLKQSPHWS 675


>gi|158314614|ref|YP_001507122.1| tetratricopeptide TPR_4 [Frankia sp. EAN1pec]
 gi|158110019|gb|ABW12216.1| Tetratricopeptide TPR_4 [Frankia sp. EAN1pec]
          Length = 1024

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 56/201 (27%), Gaps = 39/201 (19%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            AA +   AR +    ++     +   V     + A     +  A   +++ML++     
Sbjct: 546 AAAGDGEAARVLSQQRTRAGDLEDAADVL----RPAADAGDWRAAARLIDLMLEVDDLDG 601

Query: 155 FAVYS----------------------LYFESCRIGDLNSAQRYAT---KA-------LD 182
            A  +                              GD  +A   A    KA         
Sbjct: 602 LAARAEKGDKEAAVALALRLAEAGDVDQLRARADTGDPAAAGTLAEILAKAGDVDELRAR 661

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADK 239
                 W  + + +  V A + + AI  L    ++  E  +     A L    +    + 
Sbjct: 662 AGAGDIWAADWLAELLVNAGDRAGAIAVLRAAARDGVEEVKDVDQLAWLRACLAEVLLET 721

Query: 240 GDMIASYHDAIESLKLCDNSI 260
           GD   +      +     +++
Sbjct: 722 GDHDGAIAVMRAADMSDPDAV 742


>gi|157961897|ref|YP_001501931.1| tetratricopeptide repeat-containing protein [Shewanella pealeana
           ATCC 700345]
 gi|157846897|gb|ABV87396.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345]
          Length = 386

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 85/250 (34%), Gaps = 32/250 (12%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + +    + ++  P      R+ A+  L  +    G  + A+      ++    +  
Sbjct: 83  GEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEE 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               ++  Y + K+W +AI  + + K+K   E   + A      + E  D    + +   
Sbjct: 143 SETQLIAIYQVTKDWQKAIDIIKKLKRKRQHELKHDSAHFYCELANEAEDDALKLKNLQL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           AI+    C     A +  A+  + Q + +  +  +EK         +      L+  + +
Sbjct: 203 AIKQDSQCAR---ALLTLAEQYLKQEEFKSCKQAIEK---------LLTTDIDLVP-DAL 249

Query: 309 GKLKRALRLEEINKESVESL-------------VIVSKIALEMGSIDQAHAKAMLAMKIA 355
              K A  L   +    E L             + +++  +E G    A    M  +   
Sbjct: 250 AIAKEAYLLTNDSTGYQELLREAIEKGAGASVTITLAQHMIEQGHPKDAEKLIMEGLIRH 309

Query: 356 PRKEIFL-LL 364
           P  + F  L+
Sbjct: 310 PTMKSFQHLM 319


>gi|327292887|ref|XP_003231141.1| pre-mRNA splicing factor CLF1 [Trichophyton rubrum CBS 118892]
 gi|326466771|gb|EGD92224.1| pre-mRNA splicing factor CLF1 [Trichophyton rubrum CBS 118892]
          Length = 681

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 78/242 (32%), Gaps = 24/242 (9%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183
           ++Y  A    +  L   P ++  A+ S Y    +  GD         +  +    + +  
Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237
           +P    +   + +    + +  R      +        +  + W R   + +     E  
Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376

Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +  D   +     E LKL            +  A+  I Q     A   L +   + P  
Sbjct: 377 ENEDAERARQIYTECLKLIPHKKFTFAKIWLLKAEFEIRQLDLVLARKTLGQAIGMCPKD 436

Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           ++   Y  +     E +  + K   +  + N    E+ +  +++   +  +++A A   L
Sbjct: 437 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSEAWIKFAELERGLDDVERARAIYEL 495

Query: 351 AM 352
            +
Sbjct: 496 GI 497


>gi|326431070|gb|EGD76640.1| tetratricopeptide protein, variant [Salpingoeca sp. ATCC 50818]
          Length = 753

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 68/224 (30%), Gaps = 39/224 (17%)

Query: 168 GDLNSAQRYATKALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--- 216
           G+   A +    AL I         P+       +   Y    ++ +AI F  +      
Sbjct: 270 GEYAKAIQQYENALAIRLETLGEKHPNTADTYNNLGSVYSSEGQYDKAIHFHEKALAIRV 329

Query: 217 -NAKEWNRNRAILLIARSLENADKGDMIAS-----YHDAIESLKLCDNSIMASICA---A 267
               E +   A   +   L    KGD   +        AI +  L +     +       
Sbjct: 330 ETLGEKHSRTASAYLGLGLAYQRKGDYDKAIHFHEKDLAITAEVLGEKHPSTADTYNNLG 389

Query: 268 KSLISQNKKRKAEVILEKIWKV------NPHPEIANIYTHLLS--ENTVGKLK------- 312
            +  S+ +  KA    EK   +        HP  A+ Y +L S  ++     K       
Sbjct: 390 IAYRSKGEYGKAIDYYEKALAIRVKALGEKHPSTADTYNNLGSAYDDKGDYDKAIALYAK 449

Query: 313 ----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
               R   L + +  +  S + +       G  D+A A    A+
Sbjct: 450 ALAIRVETLGQKHPSTANSYLGLGIANYSKGDYDKAIAFYEKAL 493



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 28/106 (26%), Gaps = 20/106 (18%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVY---------SLYFESCRIGDLNSAQRYAT 178
               +  Y+ A     + +     T                L   +   GD + A  +  
Sbjct: 433 AYDDKGDYDKAIALYAKALAIRVET--LGQKHPSTANSYLGLGIANYSKGDYDKAIAFYE 490

Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           KAL I         P        + + Y    E+ +AI    +   
Sbjct: 491 KALAITVVVLGEKHPSTATTYNNLGEAYHSKGEYEKAIELYEKALA 536


>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
 gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 1276

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 15/196 (7%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A +   KAL+++ +            +   ++  A++  ++  +    +    A 
Sbjct: 66  GKHQEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNY----AE 121

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L  R            +     ++L+L  N   A      +L    + ++A    +K  
Sbjct: 122 ALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKAL 181

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGS 340
           ++NP+  +A  Y  +     +GKL+R         +  E+N  + E         + +  
Sbjct: 182 ELNPNNAVAWNYRGV----ALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLER 237

Query: 341 IDQAHAKAMLAMKIAP 356
             +A      A+K+ P
Sbjct: 238 YQEALQSYEKALKLNP 253



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 13/214 (6%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A ++  +A+ ++P+               + +  A    ++  K     N   A   
Sbjct: 408 YEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNP--NHAEAWYN 465

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +L   ++     +     +++KL  N   A      +L    + ++A    ++  K+
Sbjct: 466 QGVALGKLER--YQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKL 523

Query: 290 NPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           N  P  A       +     E      +   +  ++N    E+          +    +A
Sbjct: 524 N--PNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEA 581

Query: 345 HAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTD 376
                 A+++ P   + +F     +E+   +   
Sbjct: 582 LQSYDKAIQLNPNYAEALFNRGVALERLERYEEA 615


>gi|260804501|ref|XP_002597126.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
 gi|229282389|gb|EEN53138.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
          Length = 989

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 10/212 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146
           +  G + +   N   A K+ + + Q H    +  V           RQ   A     + +
Sbjct: 294 VGRGFLLVNEGNYDEAIKLFNTILQLHPMTYKAYVG--RGTAYAMTRQLLKAEADFTQAL 351

Query: 147 LQIP-ATREFAVYS-----LYFESCRIGDLNSAQRYATKA-LDISPDAPWVTEAVVQQYV 199
              P  T  +         L  E   I DLN AQ       +DI  +   + +A      
Sbjct: 352 TLEPKETEIWKRRGQVRAALGQEGQAIEDLNRAQSICKVVDVDIQKEVGLIYQAKGDNVS 411

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               ++RA   L  K+K  +        L  A  L     G  + +      +L L  + 
Sbjct: 412 ALMHFTRADKVLLVKQKQGELDKSQAKTLWNAMGLCQNSLGYCMDAVVTYQRALNLDPDF 471

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             + +  A++       +KA+ +  +  +++P
Sbjct: 472 RESIVNMAQAYKDYGNFQKADELFARALRLDP 503


>gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2950

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 65/170 (38%), Gaps = 7/170 (4%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
             D   A  +  KAL I+PD       +   Y + +++  A+    +  K+        + 
Sbjct: 2783 NDFEEAVLHYQKALSINPDKIECYYNLGNTYCIMEKFEEALECFERVVKDDP----KHSA 2838

Query: 228  LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                 +       D   +     ++++L   ++      A+  I +     A+  L++  
Sbjct: 2839 AFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVAQLYIEKGDLNAAKRHLDESM 2898

Query: 288  KVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKI 334
            ++ P +P+    Y +      N    +++A +   +++ + E+  ++ ++
Sbjct: 2899 RLQPRNPDTLVRYANYYYQIGNYKEAIQKAKQTLALDEANDEAKSLIREL 2948



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 29/208 (13%)

Query: 165  CRIGDLNSAQRYATKALDIS-------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             ++G+   A+R   +A+D +           W         +  K+    I  L++ +  
Sbjct: 2436 QKLGEFEKAERTYRRAIDANNKDYLPYYKLGW-------MQIKNKQLKEGIDNLSKAQ-- 2486

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQN 274
              ++     I+ +  SL   D+ D  A     I   K   +   +   +   A++   + 
Sbjct: 2487 TLDYQNMDIIIKLGESLMIYDE-DPTAVDEAVIVLHKGMIVDPLNYECTNALARAYEKKG 2545

Query: 275  KKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
                A    +      P      H  +  +Y  +  ++     +    L  IN E  E+L
Sbjct: 2546 DLVNAIKYGKLA-TEQPNSNSNSHYFLGTLY--MKKKDFKSAAESFRTLLRINNEHPEAL 2602

Query: 329  VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +  + I+   G+ ++A      A+K +P
Sbjct: 2603 IEYATISSIQGNFEKAKKYLKHALKSSP 2630



 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 2/126 (1%)

Query: 137  NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
              A E  E +++       A Y+       + D  +A +Y  KA+++ P+       V Q
Sbjct: 2820 EEALECFERVVKDDPKHSAAFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVAQ 2879

Query: 197  QYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAI-ESLK 254
             Y+   + + A   L++  +   +  +           + N  +    A    A+ E+  
Sbjct: 2880 LYIEKGDLNAAKRHLDESMRLQPRNPDTLVRYANYYYQIGNYKEAIQKAKQTLALDEAND 2939

Query: 255  LCDNSI 260
               + I
Sbjct: 2940 EAKSLI 2945


>gi|157369783|ref|YP_001477772.1| AAA ATPase [Serratia proteamaculans 568]
 gi|157321547|gb|ABV40644.1| AAA ATPase [Serratia proteamaculans 568]
          Length = 778

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 4/118 (3%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           ++  +  N        +Y   +E+ +L  +    +   A           A    E    
Sbjct: 549 MLYDAQTNIRHSSHDKAYEILVEAHRLAPDYFEVARIMAYFYQKSGNLSDARSQYELAIV 608

Query: 289 VNP-HPEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           ++P  P++   +        EN    + +     ++++ESVE  + +++  L     D
Sbjct: 609 LSPNTPQLHYWFGRFLLHEEENIDDAIVQFEIAHKLDEESVEVSLDLARAYLFQYEFD 666


>gi|115350208|ref|YP_772047.1| hypothetical protein Bamb_0152 [Burkholderia ambifaria AMMD]
 gi|115280196|gb|ABI85713.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           AMMD]
          Length = 828

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 88/277 (31%), Gaps = 18/277 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL   L    A  +  A+ ++  +           ++ L +     ++           
Sbjct: 6   QALQEALTHHQAGRLGEAKTLYDAILHAQ-PGQPDAMHFLGLLACQLKQYDAGLALMERS 64

Query: 146 MLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           + + P       + ++  E  R+ D   A  +  +A+ + PD P     +      A++ 
Sbjct: 65  LAERPDASYFNNLGNMLRECGRLDD---AIAHYRRAVALRPDYPEAHNNLGNALRDARDP 121

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           + A+   ++  +    +    A           D G++ A+     +++        A  
Sbjct: 122 AEAMRSCSRAIELRPGY----AEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHS 177

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319
                L +Q +   A V   +  ++NP     H  +A         +   +  R      
Sbjct: 178 NLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEHAR----AG 233

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  +  E   ++ +    M   D A      A +I P
Sbjct: 234 LEPDDAEGHCMLGRSLRSMNDFDGAARLFERACEIDP 270



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 21/275 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
             +  A   +      H  + E    L  +L  Q      ++  A       +++     
Sbjct: 153 GELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQ-----ERHADAIVHYRRAIELNPALR 207

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A   L        D + A  +A     + PD       + +      ++  A     + 
Sbjct: 208 VAHRGLAIALRATDDFDGALEHAR--AGLEPDDAEGHCMLGRSLRSMNDFDGAARLFERA 265

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +    +    A            +G+   S      +++L      A      +  + +
Sbjct: 266 CEIDPGY----APAWCRLGELRCQQGEYEESLRLCRHAIELDPELADAYNFLGLAYHNLD 321

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           +   +E+       +NP     H  +A     L   +      R  +  E+  + V+  +
Sbjct: 322 RMAASELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSEYRIAQ--ELGVDPVKIQL 379

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            +  I         A A    A++  P +    LL
Sbjct: 380 TLGDILWAKRDFSGAVAAFREAVEHDPHRAYARLL 414


>gi|295426286|ref|ZP_06818946.1| tetratricopeptide repeat family protein [Lactobacillus amylolyticus
           DSM 11664]
 gi|295064025|gb|EFG54973.1| tetratricopeptide repeat family protein [Lactobacillus amylolyticus
           DSM 11664]
          Length = 421

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 15/216 (6%)

Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           + SL  ++      G   +A+    +AL ++P+   V   + +    + ++  A+     
Sbjct: 104 LESLLVQADYYQTNGLFETAKDKLLQALKLAPEEDAVKFGLAELEFNSGQYEEALAHYKD 163

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K    +     + LI R  +   K          I+        I +   A   ++S 
Sbjct: 164 LIKRQDTFGE---VNLIQRLFQTEAKLGQYEEASQVIKKHSNAILDIDSKYQAGLVMLSV 220

Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
               +A   L+++   +P     +P +A  Y H   ++ V  L+ A      N E  E+L
Sbjct: 221 GDDDQAIKYLDEVIDQSPDYVNAYPLLAQAYQHKHDDDQV--LRSAQAGLAYN-ELDETL 277

Query: 329 VIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             + +  A  +     A       ++IAP      L
Sbjct: 278 YSMGAMAAANLQDFKTAEDLLQKGLEIAPDNSDLRL 313


>gi|71656661|ref|XP_816874.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70882031|gb|EAN95023.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1355

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 56/308 (18%)

Query: 97  AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-------MLQ 148
           + ++  A+ M    +   H        +LL  QI       ++A + LE        M  
Sbjct: 515 SGDLNRAQTMITKSIRHVHVLPE---AFLLSAQICQYIGNASLASQALEQALTLDFDMKD 571

Query: 149 IPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTE--AVVQQ 197
            P           + + Y  +     L  A +   +   +     P  P   +    +  
Sbjct: 572 QPQYNLLHGIVLGMMNKYQNAL--EALQLALKLTKEKSRVTTKGRPLQPLSLQDHVSLYL 629

Query: 198 YVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD---A 249
            +       ++   A   L +     KE           ++   A    MIA+  D   A
Sbjct: 630 QLAQTYLRLRDTEEARATLVEATAMFKE---------TTQAGRVAIANAMIAARTDMDKA 680

Query: 250 IESLKLCDN----SIMASICAAKSL--ISQNKKRKA---EVILEKIWKVNPHPEIANIYT 300
           +E LK           A    A       QN+   A   E ++E++     + ++   YT
Sbjct: 681 VEILKQVPPRSEFFTAAKTRMANLYLTYRQNRHMYANCFEELVEEVPTAQSYFQLGEAYT 740

Query: 301 HL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           ++   E  +   +RA     ++ E+ E  V + +  +      +A      A+  A    
Sbjct: 741 NIQEPEKAIAAYERAK---AMDPENAELAVRIGRALVSTHDYQRAVRYYRDAV--ASDGV 795

Query: 360 IFLLLAQI 367
            F +LA +
Sbjct: 796 NFTVLADL 803


>gi|296188918|ref|XP_002806517.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
           repeat-containing protein 4-like [Callithrix jacchus]
          Length = 612

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 8/123 (6%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  V + +W                     A +        ADKG+  A+     E++
Sbjct: 454 MLRCVVRSGQWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 509

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR
Sbjct: 510 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 565

Query: 314 ALR 316
              
Sbjct: 566 FEA 568


>gi|291484681|dbj|BAI85756.1| hypothetical protein BSNT_03360 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 423

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 16/253 (6%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC 165
              +  +    NE ++     ++  A+  Y  A +  +   +         V+    ES 
Sbjct: 122 QKLLQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESL 181

Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+   A  +  KA+D +PD       +      A + +  +    ++  + KE + +
Sbjct: 182 SASGEFEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPS 236

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L +  S     +G    +   A E ++  + +    + AAK  +   K  + + +L+
Sbjct: 237 YTSLYMPLSKSYEAEGVYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQ 296

Query: 285 KIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +   ++P      H  +A    +   E+    +     +    +E  +    ++    E+
Sbjct: 297 EALALDPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTEL 353

Query: 339 GSIDQAHAKAMLA 351
              ++A      A
Sbjct: 354 EQYEEAKQSFEAA 366



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 5/127 (3%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            LI  +++  + G+     +   ++ K   +   A   AA+         KA  ++  + 
Sbjct: 3   TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLYYEWGDVEKAISLISDLH 60

Query: 288 KVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            + P+  E+ N Y  LL +       L     + E +    ESL++++ +    G  + +
Sbjct: 61  DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS 120

Query: 345 HAKAMLA 351
             K + A
Sbjct: 121 EQKLLQA 127


>gi|225438920|ref|XP_002279290.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1068

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 31/160 (19%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           + +    ++WS+AI  L+     +               LE            D  ++L+
Sbjct: 11  LAKLCSCRDWSKAIRVLDSLLAQSCVIQDICNRAFCYSKLELHKH-----VIRDCDKALQ 65

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
           L    + A I    +L +  KK  A ++    W+          Y H + ++    LK+ 
Sbjct: 66  LEPTLLQAYILKGHALSALGKKEDALLV----WE--------QGYGHAVRQSAD--LKQF 111

Query: 315 LRLEEINKES------------VESLVIVSKIALEMGSID 342
           L LEE+ K++             ES + VS+ AL +    
Sbjct: 112 LELEELLKQNRRITCENHAMESPESSISVSESALHVNEKP 151


>gi|219129766|ref|XP_002185052.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403547|gb|EEC43499.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 175

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 1/95 (1%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ +  D  +A+ +  + LD+ P    +  A         +W RA   L Q  +     
Sbjct: 28  IQAAQKEDYTTARHHYQQGLDLVPRHADLLVAYGSLEANQGKWDRAQQLLQQALEVDATH 87

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              R  L   R      +     +   A+ +L+  
Sbjct: 88  VNARRYLEEIRQAVALRQRRSGLADKSAV-ALRDA 121


>gi|196016267|ref|XP_002117987.1| hypothetical protein TRIADDRAFT_62008 [Trichoplax adhaerens]
 gi|190579460|gb|EDV19555.1| hypothetical protein TRIADDRAFT_62008 [Trichoplax adhaerens]
          Length = 1752

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 31/189 (16%)

Query: 201 AKEWSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             ++  A++  N+            +      +  I  +  S    D+   I +    I+
Sbjct: 447 QGKYDDALSTYNKSLATQQVQLGDDHPDVAVTSSNIGQVYSSQGKYDEAHSILTKSLKIQ 506

Query: 252 SLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKVN------PHPEIANIYTHL 302
             +L D+    +I     A     + K   A  IL K  K+        HP++A  Y+ +
Sbjct: 507 QAQLDDDHPSIAITRNNIASVYQHEGKYDNALSILNKSLKIQRAKLGDNHPDVAKTYSSI 566

Query: 303 LS--------ENTVGKLK-----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                     E+ +  L      R  +  + +     +   ++ +    G  D A +   
Sbjct: 567 GQIYDYQGKYEDALSALNKSLDIRIAQFGDNHPSIATTYTSIASVYYHQGKYDDALSMHN 626

Query: 350 LAMKIAPRK 358
           +++KI   +
Sbjct: 627 ISLKIQETQ 635


>gi|182677850|ref|YP_001831996.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633733|gb|ACB94507.1| Tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 572

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 46/170 (27%), Gaps = 4/170 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL +  +        M              L  +    I    +Q   A +  E +    
Sbjct: 269 GLGAAGSRQGDELAAMIYLRLSLFLAPENSLAIITLGDIYERIKQNERAIDVYETVPDDD 328

Query: 151 ATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             R  A        E+   G    A +Y  + ++  P       A+       K+++ AI
Sbjct: 329 PLRITADIQSGQILEAL--GRTEEANKYLKRIVEEHPKDSDALSALGNLQRAHKQYAEAI 386

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
               Q      +  +    L   R +          +  D   +L L  +
Sbjct: 387 ETYTQALAATSKPEKANWPLYYFRGISYERNKQWPQAEADFRRALALFPD 436


>gi|119510065|ref|ZP_01629205.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414]
 gi|119465252|gb|EAW46149.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414]
          Length = 219

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 58/165 (35%), Gaps = 4/165 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +++ +  +    ++      + T   E    + + +   ++  +  A E L  +++  
Sbjct: 31  GKVAVNSPELVK-SRVEKLAQSRGTPEEERSQLIQQAKTLSSQGDFTGAEENLRTLIKKF 89

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
               F  + L     R      A +   +A+ ++ +       +   Y     W  AI  
Sbjct: 90  PRYAFGHFELGNVLFRQEKPEEAIKAYREAIRLNSNHALAYNGIGLVYASQSLWEEAIAA 149

Query: 211 LNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLK 254
             +  +    +    A+   A + L+   + + IAS   A++  K
Sbjct: 150 YQKALEINPNYG--DALANSAVAFLQTNQESEGIASLEKALDVFK 192


>gi|78067598|ref|YP_370367.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77968343|gb|ABB09723.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 607

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 84/223 (37%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A    +    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 169 ARELARATGETRGPAILALQALL---VRGSDRVGGLAVLKDMLKN--DLNRPEAQLAIAR 223

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D  D   +     ++L++  + + A++     L       +A  I      V  +
Sbjct: 224 QQLAVDDKD--GAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D+A   
Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDEATVF 337

Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++      + ++ LAQI    +++  +   W   
Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379



 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 91/276 (32%), Gaps = 26/276 (9%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++ A     A  + +    +    +      ++  + +   +   A      ML     
Sbjct: 120 IALGAQ--SPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQP----MLARELA 173

Query: 153 REFA-VYS---LYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           R          L  ++   R  D           L    + P    A+ +Q +   +   
Sbjct: 174 RATGETRGPAILALQALLVRGSDRVGGLAVLKDMLKNDLNRPEAQLAIARQQLAVDDKDG 233

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  +   ++       L+   +  A++   IAS+   ++      +   A +  
Sbjct: 234 AAQSLKQALQIRPDY---LPAALMLSQMGPAERAAGIASFEKYVQQNPKSRD---ARLAL 287

Query: 267 AKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEI 320
           ++  ++ ++   A+   E + K    +P P +A     +     +     LK+ ++L + 
Sbjct: 288 SQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDEATVFLKQYVQLGDK 347

Query: 321 NKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                  +  + +++IA++  +  QA        + 
Sbjct: 348 QPNLDVGQGYIYLAQIAIDQNNDAQASQWLDKVDQT 383



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 10/154 (6%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +   A      +L      D +++ +   +      +S  AS   A  L+   K 
Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161

Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             A+ +L +           P   +A     +   + VG L     + + +    E+ + 
Sbjct: 162 ADAQPMLARELARATGETRGPA-ILALQALLVRGSDRVGGLAVLKDMLKNDLNRPEAQLA 220

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +++  L +   D A      A++I P      L+
Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQIRPDYLPAALM 254


>gi|225575069|ref|ZP_03783679.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037739|gb|EEG47985.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM
           10507]
          Length = 346

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 83/242 (34%), Gaps = 19/242 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + +  L +  Y  A +  +  ++    +  +       S ++GD   A  Y  +AL    
Sbjct: 30  QARKDLDQGAYEEAVQGFQEAMERDVHKAESCRGAGIASLKLGDYEEAADYFEQALSQKG 89

Query: 186 DAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                 + V+     A     ++  A        + +++         +A +++     D
Sbjct: 90  LDKGFRKDVLSYQATAQYKNGQYEDAQKTSESLLELSEDAQSCYLAGRVALAVD-----D 144

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIA 296
              +  +  + ++       A     ++ + +  +    V LE+  K +P       E  
Sbjct: 145 YDLAKENFQKVIEEDSGYQQAVQIY-EAYLERGMEADGTVYLEQALKTSPSDAKGRCEQG 203

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            IY ++   +     KR    E ++  + E+++ + ++ L    ++ A A     ++   
Sbjct: 204 KIYYYMEDFDNAE--KRLS--EAVDGGNTEAMIFLGEVYLSKNDLESARASYEDYIQEEE 259

Query: 357 RK 358
             
Sbjct: 260 DA 261


>gi|83311235|ref|YP_421499.1| TPR repeat-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82946076|dbj|BAE50940.1| TPR repeat [Magnetospirillum magneticum AMB-1]
          Length = 548

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 17/236 (7%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A       +A  + E ML I      A++ L   + R GD   A     K +   P    
Sbjct: 17  AFNGGNLEMAAAECERMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRIQ 76

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               + +  +    +S A     +       +   +  + L  R L   D+         
Sbjct: 77  AVITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRLDEA------AA 130

Query: 249 AIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------NIYTH 301
            +E  +  D S+ A          +Q +  +A   LE+  +++P   +A       +   
Sbjct: 131 VLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQLDPGHSMAYNNLGVALQAQ 190

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +E  +  L+R L L     +  E    +     E      A A    A+ + P 
Sbjct: 191 DRTEEAISVLERGLAL---QPDDPELHYSLGCSLQEATRTADATASYRRAIALRPD 243


>gi|307728385|ref|YP_003905609.1| TPR repeat-containing protein [Burkholderia sp. CCGE1003]
 gi|307582920|gb|ADN56318.1| TPR repeat-containing protein [Burkholderia sp. CCGE1003]
          Length = 613

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 104/324 (32%), Gaps = 56/324 (17%)

Query: 110 VSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYF 162
             +Q    N  L       +L  ++AL   Q   A++    + +       A  +  +  
Sbjct: 69  ADEQKALPNVQLTSQIVFQVLAAEVALQRNQPAPAYQTYLALARDTHDPRMAQRATEIAL 128

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            +    D  +A +        +P++    +      VL+ +   A   L ++       N
Sbjct: 129 AAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGKPDDAEPLLARELARVPADN 185

Query: 223 RNRAILLI--------------------------------ARSLENADKGDMIASYHDAI 250
           R  AIL +                                A + +     D   ++    
Sbjct: 186 RGNAILALQLLLSRGPNRVGGLHVLQDMLKNDMNRPEAQLAIARQQLVADDAPGAHKSLQ 245

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENT 307
           ++L L  + + A++  ++      ++++    LEK  + NP  H   +A    +L S+  
Sbjct: 246 QALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRL 303

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH-------AKAMLAMKIAPRKEI 360
               K+   + + N   +  L+ ++ I ++  +   A         +A       P +  
Sbjct: 304 DDAQKQFEVMHKANASDLTPLMALALIKIQQKNFTDAQGYLTQYAQQAEKTPGADPGQ-A 362

Query: 361 FLLLAQIEQANSHNTDKILYWTQS 384
           ++ LAQ+      N      W   
Sbjct: 363 YIYLAQV-SLEQKNEAAAADWLSK 385


>gi|170693985|ref|ZP_02885141.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia graminis
           C4D1M]
 gi|170141057|gb|EDT09229.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia graminis
           C4D1M]
          Length = 542

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 71/232 (30%), Gaps = 32/232 (13%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P       ++ Q  +  +    AI           +    RA   +  +L+ AD+    
Sbjct: 40  HPLDEDSLTSLTQNLIEQQRLGDAIEL--ASIIAQLDSGNARAHFRLGYALQVADRHGEA 97

Query: 244 ASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
            +      +L L        S  A    +S    R+   +LE+   V  HP+  N +T+L
Sbjct: 98  VAP--YRRALALEPTLPSLRSNLAGALSLSNGDLREQTALLEQA--VLAHPDDGNAWTNL 153

Query: 303 LSE-----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +      +  G L+   R  +    S  +    +    E    D A   A  A  +AP 
Sbjct: 154 ANAYRQNLDLSGSLEAGERAVQCAPSSALAHNNYALALREAQRWDAALQAAETACTLAPD 213

Query: 358 ---KEIFLLLAQIEQANSHNTDKILYWTQSALH------------AMPDPLW 394
                  L + Q+ + +  N      W                  A P P W
Sbjct: 214 HAGMRSNLSMLQLMRGDYAN-----GWLSHEARWSGSSELRGNRPAFPAPTW 260


>gi|308802594|ref|XP_003078610.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri]
 gi|116057063|emb|CAL51490.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri]
          Length = 1474

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 10/225 (4%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A      + +       A+  L       GDL  A  +A ++++I+         +  
Sbjct: 568 DDAEAVCSRIAERNHLSADALQGLGIARACAGDLEYAHAFAHRSVNIA-STSQRQITLAN 626

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y+      +AI   +   +         AI        +   GD  ++    + +L   
Sbjct: 627 IYLSQGHTEKAIALFDIAIRRDPVS----AIGHFNIGNAHFMSGDWASARTSYLAALDRE 682

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
            +   A    A  L       +A+  +++  ++    ++  +Y   L    +G+ K+A  
Sbjct: 683 PHYYKALYNLAMLLDVTGFIAEAKDTMKRAVEIR-RSDVRGVYAMGLLYVKLGQWKKAEE 741

Query: 317 LEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +    I+ +   S V +  +A   G  + A A  + A++    
Sbjct: 742 QFKNALLIDDKHAMSHVKLGNLAFRRGEFEFAGALYLNALESDST 786


>gi|76811375|ref|YP_334393.1| TPR domain-containing protein [Burkholderia pseudomallei 1710b]
 gi|76580828|gb|ABA50303.1| TPR domain protein [Burkholderia pseudomallei 1710b]
          Length = 626

 Score = 43.0 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 95  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 154

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 155 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 214

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 215 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 270

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 271 LPHYERAVGLDP 282


>gi|319795626|ref|YP_004157266.1| hypothetical protein [Variovorax paradoxus EPS]
 gi|315598089|gb|ADU39155.1| tetratricopeptide domain protein [Variovorax paradoxus EPS]
          Length = 615

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 31/238 (13%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN----EYLVYLLEVQIALA 132
            KR   + Y AL             LA +       +         E L      +  L 
Sbjct: 359 RKRGVTQAYLALSQ-----------LAERRKDLTGAERWLSRIDSTEDLTIAQTRRAGLL 407

Query: 133 E--RQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
               +   A E +  +          +  A   L  ++ +     +A     +A   +PD
Sbjct: 408 ARQGKLPQAREIIRALPERTADDKKQKFLAEVQLLRDAKQ---YQAAYDMLAQASAAAPD 464

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIA 244
                + V  Q ++A++ +R +  + +  +   +       A   +  S  +  K  +  
Sbjct: 465 D---GDLVYDQAMVAEKLNR-LDDMERLLRRLIQLKPESQNAYNALGYSFAD-RKIRLDE 519

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           +     ++++L       +              +A  ILE  +K  P PEI   +  +
Sbjct: 520 ARTLIQKAVQLAPEDPFIADSLGWVEFRLGNTAEAIRILEAAYKTRPDPEIGAHFGEV 577


>gi|215694797|dbj|BAG89988.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 930

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 463 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 521

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 522 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 578

Query: 212 NQ 213
            +
Sbjct: 579 EE 580


>gi|149391327|gb|ABR25681.1| unknown [Oryza sativa Indica Group]
          Length = 222

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 7   AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 65

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 66  FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 122

Query: 212 NQ 213
            +
Sbjct: 123 EE 124


>gi|125531299|gb|EAY77864.1| hypothetical protein OsI_32907 [Oryza sativa Indica Group]
          Length = 1089

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 622 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 681 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 737

Query: 212 NQ 213
            +
Sbjct: 738 EE 739


>gi|115481316|ref|NP_001064251.1| Os10g0181200 [Oryza sativa Japonica Group]
 gi|113638860|dbj|BAF26165.1| Os10g0181200 [Oryza sativa Japonica Group]
          Length = 1021

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 554 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 612

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 613 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 669

Query: 212 NQ 213
            +
Sbjct: 670 EE 671


>gi|110288708|gb|ABG65944.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 377

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 31  AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 89

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 90  FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 146

Query: 212 NQ 213
            +
Sbjct: 147 EE 148


>gi|110288710|gb|AAP52447.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215694798|dbj|BAG89989.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 735

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 268 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 327 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 383

Query: 212 NQ 213
            +
Sbjct: 384 EE 385


>gi|110288709|gb|ABG65945.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|110288711|gb|ABG65946.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 614

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 268 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 327 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 383

Query: 212 NQ 213
            +
Sbjct: 384 EE 385


>gi|86741850|ref|YP_482250.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3]
 gi|86568712|gb|ABD12521.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3]
          Length = 233

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 2/102 (1%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y     G+  +   +   A ++ ++            V     +      QY  A E   
Sbjct: 116 YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALARAQFTAGQYGAARETFA 173

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++    T ++A + L   + +IGDL +A  +   A+ + PD
Sbjct: 174 WIVDRHPTDDYAQFGLGLSARKIGDLRAAVEHLALAVAMRPD 215


>gi|18642701|gb|AAL76193.1|AC092173_5 Putative crp1 protein [Oryza sativa Japonica Group]
          Length = 1089

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 622 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 681 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 737

Query: 212 NQ 213
            +
Sbjct: 738 EE 739


>gi|116623336|ref|YP_825492.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226498|gb|ABJ85207.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 248

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 7/161 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A       ++    +   +  L       A  +   A      +L++      AV
Sbjct: 77  GDLAHAVAALRQSAELRPGNERTVSTL--ALALDAMGRKADAAAAYREVLELNPINGIAV 134

Query: 158 YSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            +L Y  +   GDL+ A + A +AL++ PD P V++ +   Y+   + +RA    +    
Sbjct: 135 NNLAYILAENGGDLDDALQLARRALELLPDLPEVSDTLGWIYLKKNQAARAAEIFS-GLV 193

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               ++ +         +     GD  A+  +   +LKL  
Sbjct: 194 EKHPFDISY---HYRLGMALTQLGDNFAASGELRAALKLNP 231



 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 14/177 (7%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             L     A+   QY  A    + +   L+ P         L     R GDL  A     
Sbjct: 28  SRLEAGNAAVRAGQYEQAIAAFQALIPDLRDPEAAGDLFLRLGETYRRNGDLAHAVAALR 87

Query: 179 KALDISPDAPWVTEAV---VQQYVLAKEWSRA-ITFLNQKKKNAKEWNRNRAILLIARSL 234
           ++ ++ P        +   +       + + A    L     N    N    IL      
Sbjct: 88  QSAELRPGNERTVSTLALALDAMGRKADAAAAYREVLELNPINGIAVNNLAYILA----- 142

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              + GD+  +   A  +L+L  +    S       + +N+  +A  I   + + +P
Sbjct: 143 --ENGGDLDDALQLARRALELLPDLPEVSDTLGWIYLKKNQAARAAEIFSGLVEKHP 197


>gi|254443350|ref|ZP_05056826.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198257658|gb|EDY81966.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 607

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 80/248 (32%), Gaps = 19/248 (7%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
              +      + +  L+  Q+ L      +A +        P   +  +  L+  +    
Sbjct: 254 RELKDIFAVQDEIAGLIAKQLQLELGVSTVAKK-----TVNPEAHDAYLKGLFNHAKETK 308

Query: 169 D-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR--AITFLNQKKKNAKEW---- 221
                A  +  +AL+  P+      A+   Y+    W+         + +  A++     
Sbjct: 309 AGYEKAIEFYEQALEKDPNYASANAAMSWSYLTLGWWAHLPPREVFPKARVAAQKALELD 368

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N N    +   +++   + D + +  +   +L+L  N   A          Q +   +  
Sbjct: 369 NANAQAHITLGAIKMIYEFDWVGADKEFKRALELSPNDSQAHNMVGWVYRIQGEHEASMK 428

Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
                 +++P   +A       +      +    +    R+ E++     + + +S+   
Sbjct: 429 AFRTALELDPLNVLANFQVGRAFFFARQYDQA--IAHYHRMLELHPNHFSTHLFLSQAYR 486

Query: 337 EMGSIDQA 344
           E G  ++A
Sbjct: 487 EKGMYEEA 494


>gi|13471855|ref|NP_103422.1| hypothetical protein mll1962 [Mesorhizobium loti MAFF303099]
 gi|14022599|dbj|BAB49208.1| mll1962 [Mesorhizobium loti MAFF303099]
          Length = 159

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           P+A  M +Y        +     L  VQ  +A + Y  A  +L  + Q    ++  VY+L
Sbjct: 25  PVATIMPAYAVDDIEGADAP--DLTAVQAKIAAKDYKGALAELRDLAQDN--QQADVYNL 80

Query: 161 YFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              + R  GD+ +A  Y  KAL++ PD     E + + YV   + ++A   L   +K
Sbjct: 81  LGFTLRKTGDVTTALTYYNKALELKPDHKAAREYLGELYVETGDMNKAKEQLASLQK 137


>gi|89099189|ref|ZP_01172067.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
 gi|89086035|gb|EAR65158.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
          Length = 522

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%)

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +   Y  L          R   L     +   +   ++ I+       +A   A  A+++
Sbjct: 441 LLLSYLELERGEAEKARNRLEELVAEQPDLDGAYYYLAVISYNEQDTAKAKEYAEQAIEL 500

Query: 355 APRKEIFLLLAQ 366
            P +E + LL +
Sbjct: 501 NPSEEGYRLLLE 512


>gi|170596782|ref|XP_001902893.1| LD47713p [Brugia malayi]
 gi|158589143|gb|EDP28258.1| LD47713p, putative [Brugia malayi]
          Length = 367

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE-- 318
           A++ AA    +Q    KAE+I++    + P HP+I   Y  L+ E     +  A  L   
Sbjct: 116 AALKAAIQSRTQGNMEKAELIIQHALALAPHHPDILTEY-GLVVEMGRKNVVEAEELYSR 174

Query: 319 --EINKESVESLVIVSKIALEMGSIDQAH 345
               N    E+L+  ++    +  ID+  
Sbjct: 175 ALSYNPHHPEALIRRARTLPIVEEIDREM 203


>gi|149173479|ref|ZP_01852109.1| TPR repeat [Planctomyces maris DSM 8797]
 gi|148847661|gb|EDL61994.1| TPR repeat [Planctomyces maris DSM 8797]
          Length = 441

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 88/283 (31%), Gaps = 27/283 (9%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDL 170
                       L   +      Q   A E L+ + Q+   T E        E+      
Sbjct: 70  AYELDRQNAETLLTLARAQRRTNQVEDAVETLKKLFQLSGQTEELQREQWLVEAQVGDLK 129

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           N  Q  A   +D   +A  + E  V   +L   ++ A   +   + +  E      +   
Sbjct: 130 NLEQHLADMLIDPRGNAADICETFVNSCILNYRFADAQRVIEVWQADFPE----DPLPHY 185

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            +      +G+   +  +   +LKL    I ++   A+  +SQN+   A  I ++     
Sbjct: 186 YQGRILEHQGNWNQAETEFNAALKLSPEHIPSAYNLARIKLSQNQVDAALEIYQRC-LQQ 244

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI-------------------- 330
            H   A +       +    +  A ++    ++  E+ ++                    
Sbjct: 245 QHQHAAALLGMARCLSMQQDVAAARKILNQVQQMPENQIMKDFREVGDPAYAARNAVALQ 304

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANS 372
             ++ L  G+  QA      A+ + P+     L LA   +   
Sbjct: 305 RGQLELSAGNYQQAITNLETAVSLNPKDRKARLSLADAYRGLG 347


>gi|51101256|gb|AAT95430.1| intraflagellar transport particle protein 140 [Chlamydomonas
            reinhardtii]
          Length = 1384

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 47/221 (21%)

Query: 96   AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM----MLQIPA 151
            A      A ++     + H        +    Q    +     A +  E     ++++P 
Sbjct: 801  ACGQWDKALEVAEKNDRIHLKS----THYAYGQFMERQGDMEGARKHYEAAGCGLVEVPR 856

Query: 152  T-----REFAVYSLYFES--------------CRIGDLNSAQRYATKALDISPDAPWVTE 192
                  +   + + Y ++                +G+   A     KA D        + 
Sbjct: 857  MLFEAEKFTELQN-YIQANDSRELILWWGKYLESLGEYAKALDCYRKAGD--------SL 907

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            ++V+ +   ++W  A   +     NA  ++  R      R  E      +   Y   +  
Sbjct: 908  SMVRIHCFQRDWKAAEDEVTNSADNAASFHLARQYEASGRIPEAIRYYTLAKRYSHGVRL 967

Query: 253  LK----------LCDNSIMASIC-AAKSLISQNKKRKAEVI 282
             K          L   S  A +   A  L ++ +  KA  +
Sbjct: 968  AKTHELDSDLMNLALKSTPAVMIDTADYLFAKGQHEKAATL 1008


>gi|116621976|ref|YP_824132.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225138|gb|ABJ83847.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 283

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 63/170 (37%), Gaps = 19/170 (11%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-----KEWSRAITFLNQKKKNAKEWN 222
           G  + A++   +A  ++PD       + + Y+ A         +A    +Q  +      
Sbjct: 106 GYASKARQNFERATQLNPDNLDAQSDLFEYYLEAPGFLGGGLEKARATADQMSRINPAEG 165

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                   A +     + +  ++      +++   + +   I  A+    Q + ++A+  
Sbjct: 166 HW------ALAKLAEKRKEYSSAEDQLRRAIEAAPHQVGRFIDLARLFTKQGRYQEADQS 219

Query: 283 LEKIWKVNPH-PEI----ANIYTHLLSENTVGK--LKRALRLEEINKESV 325
           L K  ++ P+ P++    A++Y        V +  LK+ L L  +  +  
Sbjct: 220 LAKAEQIAPNSPKLIFAKADLYIKSKRNLGVARELLKKYLSLA-LTPDDP 268


>gi|320104179|ref|YP_004179770.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319751461|gb|ADV63221.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 976

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 87/245 (35%), Gaps = 34/245 (13%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E     DL  A+ +A KAL ++P  P       +      +   A   L        E  
Sbjct: 731 EHFSRRDLREARPFADKALKLNPKQPLAAYVKARLLETIGDEEAARAVLKPAL--DPENP 788

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             R + L+ +       G++  +      + +L  ++       A+  + Q   ++ +  
Sbjct: 789 NERVVDLLGQL--EMKAGNLDEAERLFETARRLDPSNSKWIAGLARVHLRQ---KRVDAF 843

Query: 283 LEKIWKVNPHPEIANIYTH------LLSENTVGKLKR--ALRLEEINKE-------SVES 327
           LE         ++A +  +      L  E     L+R    +     KE         E 
Sbjct: 844 LE---------DLAKLALNDADDLTLRKELAKRHLQRGEFDQAARWGKECLYIDVYDPEC 894

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN--SHNTDKILYWTQSA 385
             +++   L     D+A A+  +A+++ P K++ LL  ++ +A   +   D+      + 
Sbjct: 895 HELLADAHLGQNQADRAVAEYKVALQLQP-KKLALLGVKLARAEWAAGQRDEARQRLDAI 953

Query: 386 LHAMP 390
           L A P
Sbjct: 954 LQADP 958



 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 80/296 (27%), Gaps = 54/296 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK-----------LEMM 146
                A +  +    Q    N  L   ++ Q+     +   A               E +
Sbjct: 137 GRWEAAAERTAQARAQD--DNHLLARWVDAQLLRETGKLEDAVNACRWFVDLQNEQAERL 194

Query: 147 LQIPATREFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
              P        +  LYF +   G+  +       +L+   +  +       ++     W
Sbjct: 195 KTDPEALLLVGQAAELYFRAEARGEDLAQ------SLNDVINVIYEQAITTDRHCWQAAW 248

Query: 205 SRAITFLNQKKKNAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLKLC 256
                FL    +        RA+        +L      + +   + A    A  +L++ 
Sbjct: 249 LEGRLFLAGYNERLAMPELQRALTINPLAPEVLTTLGQADLNGYKLAAGREKAQRALEIN 308

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
            + + A +  A   IS  +   A    E    +NP             ++ + +   A R
Sbjct: 309 PSYLPAYVLLADLNISDERFADALKAAESALAINP-----------RDQDALARYAAAQR 357

Query: 317 L--------------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           L                 N         + +   +     +A    + A++  P +
Sbjct: 358 LLLNDAAARAAELAVLADNPRPARFYAALGERLADRRKYPEAERAFLKAVEADPNQ 413



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 71/251 (28%), Gaps = 42/251 (16%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIG 168
                   + L   ++ ++         A   L+  L  + P  R   +        + G
Sbjct: 747 KALKLNPKQPLAAYVKARLLETIGDEEAARAVLKPALDPENPNERVVDLLG--QLEMKAG 804

Query: 169 DLNSAQRYATKALDISPDAP-W-VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +L+ A+R    A  + P    W    A V       + +           +A +    + 
Sbjct: 805 NLDEAERLFETARRLDPSNSKWIAGLARVHLRQKRVD-AFLEDLAKLALNDADDLTLRKE 863

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     +  +  +G+   +     E L +           A + + QN+  +A    +  
Sbjct: 864 L-----AKRHLQRGEFDQAARWGKECLYIDVYDPECHELLADAHLGQNQADRAVAEYKVA 918

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            ++ P                        +L  +        V +++     G  D+A  
Sbjct: 919 LQLQP-----------------------KKLALLG-------VKLARAEWAAGQRDEARQ 948

Query: 347 KAMLAMKIAPR 357
           +    ++  P 
Sbjct: 949 RLDAILQADPT 959



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 108/331 (32%), Gaps = 62/331 (18%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLE 144
           AL  G + +      L  +      +      E     L  Q   AL   +   A E+LE
Sbjct: 16  ALTLGSL-VGVGEGRLTTQAAGVWVRTIQAAQENERDQL-AQALKALQVGKTATAREQLE 73

Query: 145 MMLQIP----ATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAP---------- 188
            + Q P     +   A    +        G+L+ A R   +A+  +P  P          
Sbjct: 74  ALSQSPRVHQDSDLAAEVARAQAICLRAQGELDEATRILEEAIKAAPANPDLLALLADLE 133

Query: 189 -----WVTEAVVQQYVLAKE-------WSRAITFLNQ-KKKNAKEWNRN----------- 224
                W   A       A++       W  A       K ++A    R            
Sbjct: 134 FSRGRWEAAAERTAQARAQDDNHLLARWVDAQLLRETGKLEDAVNACRWFVDLQNEQAER 193

Query: 225 -----RAILLIARSLEN-----ADKGDMIASYHDAI-----ESLKLCDNSIMASICAAKS 269
                 A+LL+ ++ E      A   D+  S +D I     +++    +   A+    + 
Sbjct: 194 LKTDPEALLLVGQAAELYFRAEARGEDLAQSLNDVINVIYEQAITTDRHCWQAAWLEGRL 253

Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGKLKRALRLEEINKESVE 326
            ++   +R A   L++   +NP  PE+        L         ++A R  EIN   + 
Sbjct: 254 FLAGYNERLAMPELQRALTINPLAPEVLTTLGQADLNGYKLAAGREKAQRALEINPSYLP 313

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + V+++ + +       A   A  A+ I PR
Sbjct: 314 AYVLLADLNISDERFADALKAAESALAINPR 344



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 54/147 (36%), Gaps = 31/147 (21%)

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            K ++  + +   A L    + E+  + D+  +   A ++LKL     +A+   A+ L +
Sbjct: 709 SKLQDRLKADPENADLNAKMAYEHFSRRDLREARPFADKALKLNPKQPLAAYVKARLLET 768

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
              +  A  +L+                 L  EN   ++                + ++ 
Sbjct: 769 IGDEEAARAVLKPA---------------LDPENPNERV----------------VDLLG 797

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKE 359
           ++ ++ G++D+A      A ++ P   
Sbjct: 798 QLEMKAGNLDEAERLFETARRLDPSNS 824


>gi|317404933|gb|EFV85300.1| hypothetical protein HMPREF0005_04328 [Achromobacter xylosoxidans
           C54]
          Length = 826

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 101/296 (34%), Gaps = 53/296 (17%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMH-----SYVSQQHTFHNEYLVYL 124
           +           ++G +AL  G +  AA     A ++      + V  Q  F        
Sbjct: 526 SAWLRAQSTAWAEEGAQALEEGRLRDAA-ERICAHRLLNPDALAGVRAQRAFER---AMR 581

Query: 125 LEVQIALAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L V+ AL    +    +     L+  ++ P     A+      +  +GD  +A R+  +A
Sbjct: 582 LGVRAALVAGNHKEVIDLTDIALDTGVEFPE--LHAMRG--RAADALGDKQTAMRHLEQA 637

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                 AP+ T+    +      W              +  +  + +L    + ++A + 
Sbjct: 638 AANE-SAPFSTQLHFARVAFNGGWFG------------EAIDAYKMVLAHGSADQSAKE- 683

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------- 292
                     E+ +        +I  A+ ++S    + A  +LE++ +  P         
Sbjct: 684 ----------EAERQLGRLGPRAIRGAREILSAGDPKAAWNLLERVAQSWPQMTEVDHEK 733

Query: 293 -PEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              +A +Y       S +T  +L    R+ ++  +    L + +  A+ +   +QA
Sbjct: 734 RRILAVLYAESRALDSSSTTERLALGERILQLVPDDPIGLRLAAVGAMRLHRFEQA 789


>gi|301758102|ref|XP_002914901.1| PREDICTED: transmembrane and TPR repeat-containing protein 4-like
           [Ailuropoda melanoleuca]
          Length = 828

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  + + EW                     A +        ADKG+  A+     E++
Sbjct: 541 MLRCMIRSGEWRNEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 596

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L + +N++ + +
Sbjct: 597 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNLGIVQNSLKRFE 654

Query: 313 RALRLEEINKESV 325
            A R      +  
Sbjct: 655 AAERSYRTAIKHR 667


>gi|302775518|ref|XP_002971176.1| hypothetical protein SELMODRAFT_172051 [Selaginella moellendorffii]
 gi|300161158|gb|EFJ27774.1| hypothetical protein SELMODRAFT_172051 [Selaginella moellendorffii]
          Length = 966

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 73/234 (31%), Gaps = 24/234 (10%)

Query: 163 ESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           E  + G + +A+     AL   P   + WV  A +++             L+   K A  
Sbjct: 565 ECRKRGSIETARAIYAHALAAFPGKKSIWVKAAQLEKS------HGTRESLDSLLKRAVG 618

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +     +L +  + E    GD+  +      +     NS    + A K      +  +A+
Sbjct: 619 YCPQAEVLWLMGAKEKWLAGDVEGAREILTAAYVAIPNSEEIWLAAFKLEFENREPERAK 678

Query: 281 VILEKI---------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           ++L K          W  +                   + K      ++     +  +++
Sbjct: 679 ILLAKARDRGCSERVWMKS-------AIVERELGKVAEERKLLEDGLKLYPSFHKLWLML 731

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            ++   +G+ + A +    A++  P      L A   +       +      +A
Sbjct: 732 GQLEERVGNFEAARSVYERALEKCPASTPLWLSAAQLEEKVGGISRARAMLTTA 785



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 97/301 (32%), Gaps = 45/301 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A  E + +   E L+ +L+      P      +     E    GD+  A+   T A   
Sbjct: 596 AAQLE-KSHGTRESLDSLLKRAVGYCPQAEVLWLMG-AKEKWLAGDVEGAREILTAAYVA 653

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK---- 239
            P++  +  A  +     +E  RA   L + +             ++ R L    +    
Sbjct: 654 IPNSEEIWLAAFKLEFENREPERAKILLAKARDRGCSERVWMKSAIVERELGKVAEERKL 713

Query: 240 -------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                                    G+  A+      +L+ C  S    + AA+      
Sbjct: 714 LEDGLKLYPSFHKLWLMLGQLEERVGNFEAARSVYERALEKCPASTPLWLSAAQLEEKVG 773

Query: 275 KKRKAEVILEKI-WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332
              +A  +L     K   +PE+      + +E   G  K A  L     +E  +S ++ +
Sbjct: 774 GISRARAMLTTARLKNRENPELWLA--AIRAETRAGNWKEADALMAKALQECRQSGLLWA 831

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT--DKILYWTQSALHAMP 390
              +EM  + +A  K      I   ++   ++A + +    +   +K   W   A+   P
Sbjct: 832 -ANVEM--VPRAQRKTKSFDAIKNSEQDPYVIAAVGKFFWQDRKVEKARNWMNRAVTFAP 888

Query: 391 D 391
           D
Sbjct: 889 D 889



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 91/227 (40%), Gaps = 30/227 (13%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A+      +  +P     W+  A +++  +A + + A +F+   +K  +E  +N  
Sbjct: 306 DIKKARLLLKSVIQTNPKHAPGWIAAARLEE--VAGKIAAARSFI---QKGCEECPKNED 360

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L + D    + +      ++K    S+   + AA+  +    K     +L K 
Sbjct: 361 VWLEACRLASGDAAKKVIAM-----AVKSIPTSVKLWMAAARLEVENAAK---SRVLRKG 412

Query: 287 WKVNPHPE---IANIYTHLLSENTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSID 342
            +    P+   +      L +E+    L  RA     +    VE  + ++++     + D
Sbjct: 413 LEFI--PDSVRLWKAVVELANEDEARILLARATECCRL---HVELWLALARL----ETYD 463

Query: 343 QAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           +A      A +  P +  I++  A++E+A   N  ++      A+ +
Sbjct: 464 KARVVLNRAREALPTEPTIWIAAAKLEEAQ-GNVSRVEGIIDRAIRS 509


>gi|166713060|ref|ZP_02244267.1| histidine kinase-response regulator hybrid protein [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 653

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 18/203 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 70  RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLVATLRTLLRARR 129

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +      +       A L    +     +    A+   AI +  L   
Sbjct: 130 AEEALRVSEARFREIFEHISAPIAVVDANLHTHEANAAFQRLIGNATPGVAIHAAGLDQA 189

Query: 259 SIMASICAAKSLISQNKKRKAEVIL------EKIWKVNPH--PEIANIYTHLLSENTVGK 310
           S M ++  A  L+ + +   A  +L      E  W+V+P+  P++  +      + T  +
Sbjct: 190 STMHALTTA--LVQRERWSGALTLLRDGKLCETEWRVSPYREPDLGLLMVE---DVTEQR 244

Query: 311 LKRALRLEEINKESVESLVIVSK 333
           L+   + +E++  + E    +++
Sbjct: 245 LREREQRQELDIATSELAHQIAQ 267


>gi|319943883|ref|ZP_08018164.1| hypothetical protein HMPREF0551_1010 [Lautropia mirabilis ATCC
           51599]
 gi|319743116|gb|EFV95522.1| hypothetical protein HMPREF0551_1010 [Lautropia mirabilis ATCC
           51599]
          Length = 539

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 54/406 (13%), Positives = 124/406 (30%), Gaps = 46/406 (11%)

Query: 1   MLR-LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           M+R  I      +  +   +       +V++TW       S  ++L +L        L  
Sbjct: 1   MIRNAIWLLVAFAGAVVLALFFQGNHGNVTLTWPPYQIELSSNMLLVLLIIGFLILHLAL 60

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +    L  P  +     +R   +  ++L   +++        A ++ + V       N 
Sbjct: 61  LLVLRTLGLPQRIRRKREQRRLQRNNRSLQEAVLAHFEGRFERAERLSAAVLAHTPEGNR 120

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYAT 178
                 + Q A A     ++  +L    +    TR         ++ R G  N+A   A 
Sbjct: 121 ------KDQGAAAALLAALSAHRLGNYARRDDWTR---------QAVRRGGKNAAL-MAR 164

Query: 179 KALDISPDAPW------------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAK- 219
               +    P                     E  +  Y  A  W + +  + Q  +  K 
Sbjct: 165 AEFALEDHQPEKALMAVGQITAGGEQQVAALETALAGYGQAGRWDQVLETVRQLTRRGKL 224

Query: 220 ---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI-SQNK 275
              E +  R           A   + + +   ++ + +     + A    A +   +   
Sbjct: 225 AANEADNLRLSAYRQLLARRAGDAEALNALWKSLSADERKKGMLAAPTMTALAEANATGD 284

Query: 276 KRK-AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            R+    +L++ +       +   Y  L +     +L++  R    + E    L ++ +I
Sbjct: 285 ARRIGIGLLDEGYDEG----VLEAYASLEALPARQRLEQLERWRLRHGEKPRLLEMLGRI 340

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
                   +A    + ++         + LAQ+ ++     +  L 
Sbjct: 341 CASERLWGKAEGYLVDSLLAGDSVSARVALAQLYESVGRPQEAALQ 386


>gi|289595906|ref|YP_003482602.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
 gi|289533693|gb|ADD08040.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
          Length = 467

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  SA     K   +S       E ++       ++  AI  L + K  + + N  RA L
Sbjct: 55  DRVSALSPKEK-KTLSRILTEAGEKMLVLK----DYEYAIKTLEKAK--SLDRNNVRAWL 107

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I R+L       +  +     E++KL  N++ A+I    +L  + + + A     +  +
Sbjct: 108 DIGRNL-LERNVQIPYAVASLKEAVKLAPNNVEANILLGDALRMEGELKSALEAYFRALE 166

Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           V+P + ++ N    +  +N V  LK+   L +      E
Sbjct: 167 VDPENEDVINKILKIEPDN-VEVLKKYAELLKKKGNYNE 204


>gi|159128075|gb|EDP53190.1| DnaJ and TPR domain protein [Aspergillus fumigatus A1163]
          Length = 522

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 58/200 (29%), Gaps = 12/200 (6%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173
            +  L  L+   +  LA      A    +  +    +    +           +G    A
Sbjct: 28  PDTPLSSLVASAKAHLASGSARDALLYFDAAVSRDPSNYLTIFQRG--AAYLSLGRTAQA 85

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIA 231
                + L + PD         +      +W  A+    +  K   +  R    A     
Sbjct: 86  LDDFDRVLQLKPDFESALLQRARLRTKTADWDGALHDFERAGKRLSDEYRETQEARDAAF 145

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288
           ++     +G        A  ++     S+      A     + +  +    L  + +   
Sbjct: 146 QAFNAEKQGAWDDCVGRANTAISKASTSLSLRQTRAHCRFEKGEVEEGISDLVHVLQLSP 205

Query: 289 --VNPHPEIANIYTHLLSEN 306
             + PH +I+++  + L ++
Sbjct: 206 GLIEPHLQISSMLFYALGDS 225


>gi|332711174|ref|ZP_08431107.1| hypothetical protein LYNGBM3L_61530 [Lyngbya majuscula 3L]
 gi|332349988|gb|EGJ29595.1| hypothetical protein LYNGBM3L_61530 [Lyngbya majuscula 3L]
          Length = 299

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 58/166 (34%), Gaps = 7/166 (4%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +      +  W +A+   +Q  +   +  + R  L + + L+    G++  +      +L
Sbjct: 49  LADLLYKSGNWEQAVKEYDQVIQRQPQLIQVR--LKLGKLLQLM--GEVAKAIEVYESAL 104

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGK 310
            L  N            + + +  KA    E      P +P     +    +  +N    
Sbjct: 105 PLSSNVATGHHIRGLIEVCRRQPEKAVKAFETAASSEPENPSHWLAWGRVEMELDNAHAA 164

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           LK   ++  +  + + +++      L +G    A  +   A ++AP
Sbjct: 165 LKAFEQILLLQPDDIVAMIHSYDALLILGDFQSAELRLSRAEQLAP 210


>gi|190574784|ref|YP_001972629.1| TPR repeat-containing protein [Stenotrophomonas maltophilia K279a]
 gi|190012706|emb|CAQ46334.1| conserved TPR repeat protein [Stenotrophomonas maltophilia K279a]
          Length = 296

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 6/151 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   H    +Q    +   + LL+        Q + A      +   P       + L  
Sbjct: 62  ASLAHVDAFRQRY-GDPPALRLLQADALRETGQADAAIALYHELSSGPQAAAA-AHGLGL 119

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            + R  D   ++    +A  + P        +    + A ++ +A   L +  + +    
Sbjct: 120 IAARRDDDGGSEEALARATQLQPLNTDYLGDLGYARLRAGQFEQAREPLAKALELSPGNA 179

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  A L    +L    +GD   +   A ++ 
Sbjct: 180 KATANL----ALWAELRGDTTTAERLAGQAN 206


>gi|94967940|ref|YP_589988.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549990|gb|ABF39914.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 515

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 84/295 (28%), Gaps = 52/295 (17%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-------- 133
             GY      ++ IA  + P A+ +H+    +    N      L  Q    +        
Sbjct: 210 RNGYIQDSEKILQIARPSKPTAKYLHTLARVREAQDNLPEASKLFQQALQLDPKSFDLLF 269

Query: 134 ---------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
                     +++ A   L+   ++   R   +  L     +      A   A +   +S
Sbjct: 270 DGARFSGQHNRWDEAVGYLQKCDEVNPDRPEVLLKLTLAYLKTRRREKAVSVARRLASVS 329

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P+ P     +    V  + W  A     +  +         A   +   + + +KG++ A
Sbjct: 330 PNDPNAQYILAFALVENELWETAEPMARKAVEQNP----KDANSQLLMGIIHLNKGELDA 385

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +     E+L+L  N        A    +    RK                          
Sbjct: 386 ARVSFDETLRLDPNL-----LDAHYYSALVSDRK-------------------------G 415

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           +    + +    L   N +   +   +  + L  G    A A    A+++ P   
Sbjct: 416 DVDAARTE-LDALVVKNPDHANAQAELGVLRLRAGDAQGARAALEAAVRLQPEAS 469



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 12/179 (6%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            +   L   + +         +     +     + ++  +     ++L+L   S      
Sbjct: 216 DSEKILQIARPSKPTAKYLHTL-----ARVREAQDNLPEASKLFQQALQLDPKSFDLLFD 270

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEI 320
            A+     N+  +A   L+K  +VNP  PE    +   Y           + R  RL  +
Sbjct: 271 GARFSGQHNRWDEAVGYLQKCDEVNPDRPEVLLKLTLAYLKTRRREKAVSVAR--RLASV 328

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           +     +  I++   +E    + A   A  A++  P+     LL  I   N    D   
Sbjct: 329 SPNDPNAQYILAFALVENELWETAEPMARKAVEQNPKDANSQLLMGIIHLNKGELDAAR 387


>gi|91774433|ref|YP_544189.1| TPR repeat-containing protein [Methylobacillus flagellatus KT]
 gi|91708420|gb|ABE48348.1| TPR repeat [Methylobacillus flagellatus KT]
          Length = 390

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 5/134 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           Y+L    A        A +     LQ       A+  +   + R G    A  +  + L 
Sbjct: 207 YVLTAYEAFNRGDDTAAQQAYRQALQADVRNIDALLGMAAIAARQGRTQDAVGWYQQVLQ 266

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P       A+++    A   S        + KN        A L  A     A++G  
Sbjct: 267 VEPRNSIAQTALLELQGQADPLSS-----ETQLKNLIGQQPGEAYLHAALGNHYAEQGQW 321

Query: 243 IASYHDAIESLKLC 256
             +     ++  L 
Sbjct: 322 PLAQQSYFQAHHLD 335


>gi|57096757|ref|XP_532644.1| PREDICTED: similar to CG4050-PA, isoform A [Canis familiaris]
          Length = 915

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  ++N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALDLNPKHK 631

Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
                S +++ +   E+    +A  + +  +   P     +  L  +   +  +++    
Sbjct: 632 LALFNSAILMQESG-EVKLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEV 689

Query: 381 WTQSALHAMPD 391
           W + A+    D
Sbjct: 690 WLKKAIKLQAD 700


>gi|47230441|emb|CAF99634.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1210

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 37/225 (16%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G+   A  +  +AL I+ D P     +   ++  +EW        +  K     N 
Sbjct: 594 ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND 653

Query: 224 NRAILLIA-----------RSLENADKGDMIASYHDAIESLKLCD-NSIMA----SICAA 267
             ++L +            R  E  +K     +     + L+    N   A    ++ A 
Sbjct: 654 TYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAH 712

Query: 268 KSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRL 317
           K    + +      R+A   +  +W       +A+IY       +  +     LK+    
Sbjct: 713 KGYYREARDVFAQVREATADISDVWLN-----LAHIYVEQKQYISAVQMYENCLKKF--- 764

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
                ++ E L+ +++   + G + +     + A  +AP   + +
Sbjct: 765 --YKYQNTEVLLYLARALFKCGKLQECKQMLLKARHVAPSDTVLM 807


>gi|17158736|ref|NP_478247.1| hypothetical protein all7600 [Nostoc sp. PCC 7120]
 gi|17134685|dbj|BAB77243.1| all7600 [Nostoc sp. PCC 7120]
          Length = 225

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L     R  D ++A      AL ++P            YV   ++ +AI   NQ  K
Sbjct: 77  LRGLAKSQLR--DFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVK 134

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              + N       +  +  +  +G+   +  D  ++L++  N   A      +  +    
Sbjct: 135 --IDPNSQDGYYNLGLA--HFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDS 190

Query: 277 RKAEVILEKI 286
           + A   L++ 
Sbjct: 191 KSAVTDLQQA 200


>gi|323449907|gb|EGB05792.1| hypothetical protein AURANDRAFT_30520 [Aureococcus anophagefferens]
          Length = 423

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 71/239 (29%), Gaps = 8/239 (3%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              Y  A   L  M ++   R   +  L        D       A   +D    +P    
Sbjct: 136 AADYEAAVRSLRTMRRVEPHRMAGLELLSTALWHFKDDVELCYLARHCVDFDARSPEAWC 195

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A      L KE   AI    +       +    A        E     D   +      +
Sbjct: 196 ASGNCLSLQKEHDGAIRCFQRAIAVDPRF----AYAYTLCGHEYVANEDFEKAIGMYRHA 251

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVG 309
           +++ +    A          Q K   AE   ++    NP   + + Y  +    ++    
Sbjct: 252 MRIDERHYNAWYGLGAIYYRQEKYELAEYHFDRALCHNPTSSVLHCYLGMTLHANQKCHD 311

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
            L+   R   +  ++ ++    + + + +   + A A+       APR   +  L+ ++
Sbjct: 312 ALRHLRRAALMEPKNPQARFQCANVLISLDKYEDALAELRAVSDHAPREASVHFLMGKV 370


>gi|315050180|ref|XP_003174464.1| hypothetical protein MGYG_01991 [Arthroderma gypseum CBS 118893]
 gi|311339779|gb|EFQ98981.1| hypothetical protein MGYG_01991 [Arthroderma gypseum CBS 118893]
          Length = 916

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 29/161 (18%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  E  + G++++ +R   +A + +P+   +  A V+      +  +A   L+  ++ A 
Sbjct: 613 LAKEKWQAGEIDNTRRVLGRAFNQNPNNEDIWLAAVKLEADTNQIEQARELLSTARREAG 672

Query: 220 E--------------WNRNRAILLIARSLENADKGD-----------MIASYHDAIES-- 252
                           N++ A+ L+ + L+   K D                  A E+  
Sbjct: 673 TDRVWIKSVAYERQLGNKDHALNLVNQGLQLYPKADKLWMLKGQIYESDGQLQQAREAYG 732

Query: 253 --LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              + C  S+   + A++         KA  +L++     P
Sbjct: 733 TGTRACPKSVPLWLLASRLEEKAGVVVKARSVLDRARLAVP 773


>gi|195168834|ref|XP_002025235.1| GL13341 [Drosophila persimilis]
 gi|194108691|gb|EDW30734.1| GL13341 [Drosophila persimilis]
          Length = 604

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 5/130 (3%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +    F S +      A      A  ++P    V + +   YV  K +  A T      +
Sbjct: 346 LRGNLFISLQR--YREAIEAFRNAQGLAPYRFEVYKGLFHCYVAQKRFKEAQTMCVWAIR 403

Query: 217 NAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +       R+  +  R+L  + +     ++     ++LK+  +   A    A+    +  
Sbjct: 404 S--FRTSPRSYTMFGRTLFHSTNPAAKRSARKFVEKALKIDSSYTPAVALMAEICQYEGA 461

Query: 276 KRKAEVILEK 285
            + A  +LEK
Sbjct: 462 TKAAIKLLEK 471


>gi|159475992|ref|XP_001696098.1| intraflagellar transport particle protein IFT140 [Chlamydomonas
            reinhardtii]
 gi|158275269|gb|EDP01047.1| intraflagellar transport particle protein IFT140 [Chlamydomonas
            reinhardtii]
          Length = 1384

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 47/221 (21%)

Query: 96   AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM----MLQIPA 151
            A      A ++     + H        +    Q    +     A +  E     ++++P 
Sbjct: 801  ACGQWDKALEVAEKNDRIHLKS----THYAYGQFMERQGDMEGARKHYEAAGCGLVEVPR 856

Query: 152  T-----REFAVYSLYFES--------------CRIGDLNSAQRYATKALDISPDAPWVTE 192
                  +   + + Y ++                +G+   A     KA D        + 
Sbjct: 857  MLFEAEKFTELQN-YIQANDSRELILWWGKYLESLGEYAKALDCYRKAGD--------SL 907

Query: 193  AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            ++V+ +   ++W  A   +     NA  ++  R      R  E      +   Y   +  
Sbjct: 908  SMVRIHCFQRDWKAAEDEVTNSADNAASFHLARQYEASGRIPEAIRYYTLAKRYSHGVRL 967

Query: 253  LK----------LCDNSIMASIC-AAKSLISQNKKRKAEVI 282
             K          L   S  A +   A  L ++ +  KA  +
Sbjct: 968  AKTHELDSDLMNLALKSTPAVMIDTADYLFAKGQHEKAATL 1008


>gi|90022221|ref|YP_528048.1| molybdopterin converting factor subunit 1 [Saccharophagus degradans
           2-40]
 gi|89951821|gb|ABD81836.1| peptidase M48, Ste24p [Saccharophagus degradans 2-40]
          Length = 503

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 1/91 (1%)

Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
              Y     + E  +     ++  A Y L     R G    A   A + +   P+  + T
Sbjct: 306 TNNYGEDVRRFENELRGNRFSKLAAQYGLVLSLTRAGKTERALTLAEELVAAEPENIYFT 365

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            A    Y    ++  A+  L +K K     +
Sbjct: 366 VARADVYAEKGDFETAVKALQEKLKTHPNHH 396


>gi|74152020|dbj|BAE32046.1| unnamed protein product [Mus musculus]
          Length = 463

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 83/255 (32%), Gaps = 37/255 (14%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                   +  + +L         ++  A   +E  L   + + + +        R   +
Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A     +AL  SP + ++                         +    + +    L  
Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQITQLRT 295

Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +R+ +   + ++      AI    E+LKL     MA +C A+     ++  +AE   +K 
Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                      +  H+  +  +    R  R  + +K+S +  + +    L++     A  
Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405

Query: 347 KAMLAMKIAPRKEIF 361
           K + A++    + + 
Sbjct: 406 KLLTALEKVAERRVC 420


>gi|281425004|ref|ZP_06255917.1| putative TPR domain protein [Prevotella oris F0302]
 gi|281400848|gb|EFB31679.1| putative TPR domain protein [Prevotella oris F0302]
          Length = 578

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 72/171 (42%), Gaps = 3/171 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKA 180
              L+  +A A  + + A+  L+  +++      A Y L  FES +  D   A  Y TKA
Sbjct: 40  TMFLDAILAEAADKNDSAYALLKQCIELNPNAAEAYYFLAPFESDKKNDTL-AISYLTKA 98

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             +SPD     E + + Y+ A+++++AI        +  +      +LL   + +  D  
Sbjct: 99  CALSPDNDDYQERLAEYYINAQQYAKAIDVFEALITHHSDRTDVLQVLLQLYNQQK-DYD 157

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +M+ +     ++    +   M+ +   +    + +  KA   L + +  +P
Sbjct: 158 NMLRTLARLEQNDGNSEALTMSKVHVYELKGDRKQAYKALQTLCETYPNDP 208


>gi|241764831|ref|ZP_04762836.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax delafieldii 2AN]
 gi|241365626|gb|EER60350.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax delafieldii 2AN]
          Length = 762

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 75/271 (27%), Gaps = 25/271 (9%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY-----LLEV--QIALAERQYNIAHEK 142
            GL+         A +            N  L +     +L    Q  LA  + + A   
Sbjct: 66  EGLLVHGLG----ALQRRKTADGLRILENAALAHPSDCEILVALGQAKLAMGRKSAAVAA 121

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            E +L +      A Y L   +   G  ++A      A    P                 
Sbjct: 122 FEQVLVMAPGHPAASYQLAMLALANGREDNALCLLRTAAANEPSWVDAQYQYGNMLRSRG 181

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           E   A  +         + +    + L     ++    + +     A++   L       
Sbjct: 182 EIHEAEKYYRLALAVQAD-HVETLVNLGGLLKDSGRFAEAVQCLERALQ---LRPELTQP 237

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLE 318
           +   A   ++Q     A   L+    +NP    A  +         +    +L     L 
Sbjct: 238 AFNLAMIRVNQRMWDDASRWLQHTIAINPKQADAKYWLGNTLMGSGDVAASRLAYQSAL- 296

Query: 319 EINKESVESL--VIVSKI---ALEMGSIDQA 344
            +N   V++     ++++   A+  G    A
Sbjct: 297 RLNANYVQARWGYTMAQLPAVAVSAGEQGLA 327


>gi|157273509|gb|ABV27408.1| tetratricopeptide repeat protein [Candidatus Chloracidobacterium
           thermophilum]
          Length = 601

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 18/148 (12%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A  ++P    +  A+   Y  A ++ RAIT L    K   E   N+++          
Sbjct: 472 ERAYALAPHEGRLARALGNAYCQAGQFERAITTLEPWVK-GDETTLNQSLACYDYGYALL 530

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             G    +      +  L  +        A+      + R+A  +          PE + 
Sbjct: 531 ATGRPRQARPYLERAALLAPD-------DAQIWFILAEARRALRLC---------PEASA 574

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESV 325
            Y     +    +   A R  ++ ++  
Sbjct: 575 AYAQAR-QLAPNRADIAQRQADLAQDCP 601


>gi|109899227|ref|YP_662482.1| response regulator receiver protein [Pseudoalteromonas atlantica
           T6c]
 gi|109701508|gb|ABG41428.1| response regulator receiver protein [Pseudoalteromonas atlantica
           T6c]
          Length = 538

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 13/165 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A + +  +   P ++  A   L     + GD ++A      A +ISP      + 
Sbjct: 215 NEDEAAEKLVLRLAFKPESQLAAYDLLMSLQIKQGDFDTALECVLMASEISPRNIRRHKT 274

Query: 194 VVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARS----LENADKGDMIASYH 247
            +    +  ++   +    +  K       +     L +AR+       AD+    A   
Sbjct: 275 ALDLSRITHDYHTQLEAAKKIVKFAKNSIHDTPEHYLNVARASIDYAMTADEEQTSALVK 334

Query: 248 DAIESLKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILEK 285
            A E ++    +   +       +  A+ +   ++K  A+ +LE+
Sbjct: 335 QANEYIRQSRQAFPKADMQDQINVINARLMYLADEKDNAKALLEQ 379


>gi|299142170|ref|ZP_07035303.1| TPR domain-containing protein [Prevotella oris C735]
 gi|298576259|gb|EFI48132.1| TPR domain-containing protein [Prevotella oris C735]
          Length = 593

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 87/215 (40%), Gaps = 12/215 (5%)

Query: 87  ALYTGLMSI------AAHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYN 137
           AL   +M+        A +    +K+ S  +     + + +      L+  +A A  + +
Sbjct: 11  ALSITMMAATAVFPSFAKHGKKQKKVVSSANMPMMSYEDSVRYNTMFLDAILAEAADKND 70

Query: 138 IAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
            A+  L+  +++      A Y L  FES +  D   A  Y TKA  +SPD     E + +
Sbjct: 71  SAYALLKQCIELNPNAAEAYYFLAPFESDKKNDTL-AISYLTKACALSPDNDDYQERLAE 129

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            Y+ A+++++AI        +  +      +LL   + +  D  +M+ +     ++    
Sbjct: 130 YYINAQQYAKAIDVFEALITHHSDRTDVLQVLLQLYNQQK-DYDNMLRTLARLEQNDGNS 188

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +   M+ +   +    + +  KA   L + +  +P
Sbjct: 189 EALTMSKVHVYELKDDRKQAYKALQTLCETYPNDP 223


>gi|90417050|ref|ZP_01224978.1| TPR domain protein [marine gamma proteobacterium HTCC2207]
 gi|90331066|gb|EAS46322.1| TPR domain protein [marine gamma proteobacterium HTCC2207]
          Length = 683

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 54/301 (17%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---YLLEVQIAL--AERQYNIAHEKLE 144
            G + +A   I  AR            HN  L+    +L     L   ++ Y+   +K +
Sbjct: 99  RGHILMAQGEIADARASFQQA----VIHNGSLIASWQMLMTLTDLPVDQKAYDFFEDKFQ 154

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +  +P      V ++  E    G L+ A++     L   P        +    V     
Sbjct: 155 RLAALPP-ELLGVRNMMEE----GKLSKAEQLCRSFLQQHPKHIEGMRLLADLGVKTHVL 209

Query: 205 SRAITFLNQKKKNAKE------------WNRNRAILLIARSLENADKGDM---------- 242
             A   L        E            + R +  L + ++    D              
Sbjct: 210 DDAEFILESALVYEPENQLVRFDYMNVLYKRQKFELCMEQAQVLLDADPENSKYRFSYAN 269

Query: 243 --------IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                     +     E +    ++  + +    +L +  +  +A      +++    P+
Sbjct: 270 QCVAVGRFEEALALYDEFIAADPSAAPSHLLRGHTLKTIGRIDEAVEAYRAVYRAK--PD 327

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLV--------IVSKIALEMGSIDQAHA 346
             + +  L +  T G     + L   +++S  + +         + K   +      A  
Sbjct: 328 FGDAFWSLANLKTYGFEDAEIDLMREHQQSDSTGLDDRIHLSFALGKAMEDAKDYAAASD 387

Query: 347 K 347
            
Sbjct: 388 Y 388


>gi|228474051|ref|ZP_04058792.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
 gi|228274565|gb|EEK13406.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
          Length = 996

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 73/220 (33%), Gaps = 18/220 (8%)

Query: 84  GYKALYTGLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEY------LVYLLEVQIALA 132
           GY  +    +  AA +         +K  + V+ +    +               QI   
Sbjct: 708 GYVKVSDSEIDSAAFDAAERLYVQNKKQEAKVALEKYLKDYPKGTGASQAEFYLAQIYFD 767

Query: 133 ERQYNIAHEKLEMML---QIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDA 187
           E Q + A    E +L   +   + +  V   ++Y E      +        K   ++ + 
Sbjct: 768 ENQKDKALPLYEKVLAQGRNEYSEQVLVRLSNIYLEKEDTDKVLPLLEEIEKTSSVAQNL 827

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            +    +++ +   KE ++AI +  +        NR +    +  +      GD   +  
Sbjct: 828 IFARSNLMKAFYKKKEHAKAIVYAKKILAEKGADNRLKNDARVIMARAYMATGDEAEAEK 887

Query: 248 DAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVILEK 285
              E  K   +++MA      +       + +K+  +++K
Sbjct: 888 QYAEVRKTASDALMAEALYYDAYFKNKAGQYKKSNEVVQK 927


>gi|168044085|ref|XP_001774513.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674225|gb|EDQ60737.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 932

 Score = 43.0 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 73/211 (34%), Gaps = 18/211 (8%)

Query: 151 ATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             +    Y     + +  GD++ A  Y + A+++ P+       +   ++       A  
Sbjct: 72  EPKFAECYGNMANALKEKGDIDLAILYYSAAIELKPNFCDAWSNLASAFMRKGRLQEAAE 131

Query: 210 FLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                        + + N   LL A+ L +        +Y   +E+++L     +A    
Sbjct: 132 CCQHALILNPRLVDAHSNLGNLLKAQGLTHH-------AYLCYVEAIRLQPTFAIAWSNL 184

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A  L+   + +KA    ++  ++ P     H  + N+   +        +    R  ++ 
Sbjct: 185 AGLLMEAGELQKALTYYKEAIRLKPSFVDAHLNLGNVLKAMNRH--QEAIACYNRSIQLR 242

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   +   ++ +  E G +D A      A+
Sbjct: 243 PDYAIAYGNLASVYYEQGLLDHAIVHYKQAL 273


>gi|325845190|ref|ZP_08168498.1| tetratricopeptide repeat protein [Turicibacter sp. HGF1]
 gi|325488786|gb|EGC91187.1| tetratricopeptide repeat protein [Turicibacter sp. HGF1]
          Length = 416

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 74/206 (35%), Gaps = 23/206 (11%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + ++ D   A++   +  ++ P    +   + + Y+  +++ +A+  + +   +  E+N 
Sbjct: 212 AYQLNDEVEAKKVFQELKELDPSYDTIYPILAKIYLKEEDYEKALEMVAEGMTHN-EYN- 269

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L   +        D  A+     E+L L    + +++ + +  +      +    +
Sbjct: 270 --AELYSIKGTALEKLKDFEAARDAYYEALNLDPEDLESALRSNRICLMLEDYEEVVHNI 327

Query: 284 EK-----------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +             W      ++A  Y  L   +         +   +  +++E L   +
Sbjct: 328 KHYEENGLYDDHFTW------DLAIAYLELEEYDEAK--ACFEQGAALFADNIEFLFDYA 379

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358
           +  +E G  ++A       +++ P  
Sbjct: 380 QFLIEEGLSNEAIKLLERILQLDPSA 405


>gi|322699593|gb|EFY91353.1| 20S cyclosome subunit (BimA/Nuc2/Cdc27), putative [Metarhizium
           acridum CQMa 102]
          Length = 818

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 91/268 (33%), Gaps = 20/268 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDIS 184
           Q A     Y  A +    M     +R   +    ++ +   R  DL+     A + +D +
Sbjct: 553 QAA-----YAEAEKFFRRMRVQAPSRLQDMEVYSTILWHLKRETDLS---FLAHELVDSA 604

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             +P    AV   + LA++  +A+    +  +   ++    A     +  E+    +   
Sbjct: 605 WHSPQAWCAVGNAWSLARDPEQALRCFKRATQLDPKF----AYAFTLQGHEHVTNEEYDK 660

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +     +++        A     +         KA         +NP+  +       + 
Sbjct: 661 ALTAYRQAIGADRRHYNAYYGIGRVQERLGAYEKAYDHYYAAQTINPNNAVLICCMGGVL 720

Query: 305 ENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360
           E     V  L    +  E+   + ++    ++  L +G I+ A  + M+   +AP    +
Sbjct: 721 EKQKQMVQALHAYTKAAELAPRAAQTRYKKARALLTVGQIEAAQKELMILKDLAPDEATV 780

Query: 361 FLLLAQIEQANSHNTDKILYWT-QSALH 387
             LL  + +  +     + ++T   AL 
Sbjct: 781 HFLLGTLYRNTNERQLAVRHFTIALALD 808


>gi|302546589|ref|ZP_07298931.1| putative tetratricopeptide repeat protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302464207|gb|EFL27300.1| putative tetratricopeptide repeat protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 429

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 15/234 (6%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E  R  D ++A   A  A  + P  P +   +     L  +   A   L +  + +  
Sbjct: 145 LVELGRYKDASAA---AEHADSVRPGIP-IFTRLAYVKELRGDPEGAREVLERA-RESAT 199

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              + A +  +       +G   A+      +L+     + A     ++  ++++   A 
Sbjct: 200 SPSDIAYVSTSLGQLAFGQGRYDAARSAFHTALRAAPGYLPALEYRGRTAAAEDRLGAAV 259

Query: 281 VILEKIWKVNPHP----EIANIY-THLLSENTVGKLKRALR-LEEINKESVESLVIVSKI 334
             LEK+ + +P P     +   Y     +E    +       +       V + +  + +
Sbjct: 260 RDLEKVVRSSPLPAQLAALGEAYEARGDAEKAKQQYAVVDTWITLARANGVATDLDSALV 319

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           A + G + +A   A               LA     N  +         +A  A
Sbjct: 320 AADHGDVKEALKAARAEWDRRQTVHTADALAWALHRNGKD----REALTAAKRA 369



 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 60/205 (29%), Gaps = 15/205 (7%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L   +   G  ++A+     AL  +P      E   +          A+  L +  +++ 
Sbjct: 211 LGQLAFGQGRYDAARSAFHTALRAAPGYLPALEYRGRTAAAEDRLGAAVRDLEKVVRSSP 270

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHD----AIESLKLCDNSIMASICAAKSLISQNK 275
              +  A+     +  +A+K     +  D       +  +  +   A + A         
Sbjct: 271 LPAQLAALGEAYEARGDAEKAKQQYAVVDTWITLARANGVATDLDSALVAA-----DHGD 325

Query: 276 KRKAEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            ++A       W      H   A  +    +      L  A R          +  +  +
Sbjct: 326 VKEALKAARAEWDRRQTVHTADALAWALHRNGKDREALTAAKR--AAEPGYRNAAFLYHR 383

Query: 334 IALE--MGSIDQAHAKAMLAMKIAP 356
             +E  +G  D A      A+ + P
Sbjct: 384 GMIEKSLGEEDAARDHLAEALDLNP 408


>gi|115377212|ref|ZP_01464424.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310821207|ref|YP_003953565.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
            DW4/3-1]
 gi|115365795|gb|EAU64818.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309394279|gb|ADO71738.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1707

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%)

Query: 166  RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            R+GDL  A +    AL+  P          +  +     + A   L  + + +K+     
Sbjct: 963  RLGDLERAAQLYQSALEAQPHCLPALMGARRVQLKQGNPTAARATLEAEARVSKDSRSAV 1022

Query: 226  AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-----ICAAKS----LISQNKK 276
               + A  L  +   D+  +     ++L+    + +A+     + A +     L + +++
Sbjct: 1023 EAFIAAAKLSTSKLQDLDGAAALYRQALERDPLNAVATTGLEDLLAQRGGTADLAALHER 1082

Query: 277  RKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            R    ++++         +  A +Y   L +     L    R    +    ++L +  ++
Sbjct: 1083 RGEARLVKRDVSAAAASFVSGAKLYLTALDDRAKA-LALVDRALYAHPSYPDALELKGRL 1141

Query: 335  ALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             L+     +A +     ++      + 
Sbjct: 1142 LLDAQQYAEAASALAQRVQQGGDPRLL 1168



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            D   A     + L +SP      +A+ + Y     W+  I     + + A    +   +
Sbjct: 609 KDRAGAITVYERVLALSPSYLPALKALGRLYAQEGRWNELIKMYRAEAEIASTTEQASTL 668

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           +     L          +     E+L L  +   A    A+   SQ
Sbjct: 669 IYKIGELYEHRLKSENEAIASYQEALTLAPSYFPALRALARIYRSQ 714



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 22/227 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +   A  ++  V      +   L  L  L  Q    E ++N   +      +I +T E A
Sbjct: 610 DRAGAITVYERVLALSPSYLPALKALGRLYAQ----EGRWNELIKMYRAEAEIASTTEQA 665

Query: 157 VYSLYFESC----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              +Y        R+   N A     +AL ++P       A+ + Y     W   I  L 
Sbjct: 666 STLIYKIGELYEHRLKSENEAIASYQEALTLAPSYFPALRALARIYRSQSAWESLIEVLR 725

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSL 270
            +  N  +       L  A ++          +     E L++  +   A+   A  +  
Sbjct: 726 AEAANRIDPTERANALFQAAAIWEDQLQRPELAIEGYQEVLRVAPSH--AASLRALERLY 783

Query: 271 ISQNKKRKAEVILEKIWKVNPHP--------EIANIYTHLLSENTVG 309
           ++Q+  ++   IL++  +V   P        ++A +Y     E T  
Sbjct: 784 VTQDNTKELVAILDRETQVGHSPGAKVAAYLKLARLYLDRFQEPTRA 830


>gi|40849926|gb|AAR95675.1| plectin 10 [Mus musculus]
          Length = 4550

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1404 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1463

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1464 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1523

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1524 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1564


>gi|330972812|gb|EGH72878.1| TPR repeat-containing protein [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 556

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  + LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217
           SA   A      +P       A   Q   A  +  ++ ++ +  +               
Sbjct: 84  SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143

Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             + +    +L                +  ++L     GD   S    +E     +  I 
Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + D+A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 74/205 (36%), Gaps = 7/205 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    + ++  N   A K  S    +        +YL+E +   +  Q +   + L   L
Sbjct: 340 LRQADILVSNGNGAEAAKRLSEARAEE-PDYAIQLYLIEAETLTSNDQLDRGWQVLNQAL 398

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206
           +        +Y+    + +  DL   ++     +   P+      A+          +S 
Sbjct: 399 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYSE 458

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   + +  K + +       +L +    N   G++  +     ++L+   +  +A+   
Sbjct: 459 ARDLIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 513

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
            + L ++ ++R+A+ +  K  +  P
Sbjct: 514 GEVLWAKGEQREAKKVWAKALEQQP 538


>gi|303326342|ref|ZP_07356785.1| TPR domain protein/response regulator receiver domain protein
           [Desulfovibrio sp. 3_1_syn3]
 gi|302864258|gb|EFL87189.1| TPR domain protein/response regulator receiver domain protein
           [Desulfovibrio sp. 3_1_syn3]
          Length = 454

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 78/204 (38%), Gaps = 18/204 (8%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                L +     K   +   +L  AR+L    +G+ + +     ++L L  NS  A + 
Sbjct: 134 GVQALLEKIALTIKPHGKLGRVLEWARAL--MAQGEHLRALQVCKQALDLKANSAAALLL 191

Query: 266 AAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
                 +  +  KA    E   +       P  ++A +Y    + NT  +L+   RL+ +
Sbjct: 192 IGDVFRAMRQYDKACEAYENASRTSAMYLEPLRKMAEVYAE--TGNTAKRLECLERLDGL 249

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHN 374
           +  +VE  + + +I L+M   + A      AM ++ R+       +   +A +      +
Sbjct: 250 SPLNVERKLTLGEIYLQMNRPENARKIFDQAMTLSDREATEYISGVAFRVADV--YMDKD 307

Query: 375 TDKILYWTQSALHAMPDPLWISDD 398
               + + Q  L A     W ++D
Sbjct: 308 PQTAVAFLQRGLEAKRG-FWGTED 330


>gi|302186446|ref|ZP_07263119.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae
           642]
          Length = 556

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  + LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217
           SA   A      +P       A   Q   A  +  ++ ++ +  +               
Sbjct: 84  SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143

Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             + +    +L                +  ++L     GD   S    +E     +  I 
Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + D+A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|284052246|ref|ZP_06382456.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca]
          Length = 751

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 73/225 (32%), Gaps = 35/225 (15%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +++ A    +  +        A + L     ++     A     KA+ I PD  W   
Sbjct: 31  AGKWSEAVSAFQKAIAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHH 90

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + + +    + + A++   +      ++       L   + +     D+  +Y  AI+ 
Sbjct: 91  HLGEAFQALNQPALAVSAFRKAIAINPDFC-WSYYQLAKAATQLQQWEDVADAYPKAIQ- 148

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
             L  + +   +  +K+L   N+           W+     ++  +Y  +LS+       
Sbjct: 149 --LKSDFLEFYLGLSKALFELNR-----------WE-----DLVKLYPLILSQ------- 183

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                     + ++    +++  +E    D A       ++  P 
Sbjct: 184 --------QPDFIKHYYSLAETLIEQECWDAALVIYETIIEHNPS 220


>gi|229588281|ref|YP_002870400.1| hypothetical protein PFLU0735 [Pseudomonas fluorescens SBW25]
 gi|229360147|emb|CAY47004.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 574

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 80/229 (34%), Gaps = 36/229 (15%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           +  +  +G   +A   +      +PD      A   Q   A  +  ++ ++ +  +   +
Sbjct: 91  FRIAEYLGADQAALDTSMIWAKNAPDDLEAQRAAAIQLARAGRYDDSMVYMEKVLQGKGD 150

Query: 221 WNRNRAILLIA-----------RSLENADKGDMIASY------------HDAIESLKLCD 257
            + +   L  A           +S +   +     S              +A  +LKL +
Sbjct: 151 THFDFLALSAADTDQDTRNGLMKSFDRLLQKHPKNSQLVFGKALLLQQDDEADAALKLLE 210

Query: 258 NSIM------ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTH-LLSENT 307
            +          +  A+ L + N+ ++A  +LEK   +  +P+   +   Y   L+ ++ 
Sbjct: 211 QNPPEEGEIAPILLRARLLQNLNRGKEAIPLLEK--NIKKYPDDKRLRLTYARMLVEQDR 268

Query: 308 VGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +   K +   L +   +  E    ++ + LE  + D+A       ++  
Sbjct: 269 MEDAKVQFANLVQQYPDDDELRYSLALVCLEAKAWDEAKGYLEELIQRE 317



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +     K+      Q    ++ L Y L   + L  + ++ A   LE ++Q  +  + A  
Sbjct: 267 DRMEDAKVQFANLVQQYPDDDELRYSL-ALVCLEAKAWDEAKGYLEELIQRESHVDSAHL 325

Query: 159 SLYFESCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           +L   +    D  +A   YA            + +A     +       A   L   +  
Sbjct: 326 NLGRIAEERNDPQAALLEYAQVGPGNDYLPAQLRQA--DILMSNGRTDEAEKRLAAARDA 383

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             ++      L + ++   +       ++    ++L    + +      A     +N   
Sbjct: 384 EPDYAIQ---LYLIQAETLSANKQGERAWKLLQQALLQFPDDLNLLYTRAMQAEKRNDLA 440

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSK 333
           + E  L  I K +P   +A         +   +   A  L     ++N E    L  +  
Sbjct: 441 QMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRYAEAKVLIEQAHKLNPEDPAVLDSLGW 500

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
           +   +G++D+A     LA++  P +E+   L ++  AN    +    W
Sbjct: 501 VNYRLGNLDEAERLLRLALERFPDQEVAAHLGEVLWANGKQREARQIW 548


>gi|115748300|ref|XP_001199177.1| PREDICTED: similar to heat shock protein 60 [Strongylocentrotus
           purpuratus]
 gi|115920030|ref|XP_001202135.1| PREDICTED: similar to heat shock protein 60 [Strongylocentrotus
           purpuratus]
          Length = 266

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 12/138 (8%)

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKL----CDNSIMASIC---AAKSLISQNKKRKA 279
           +  +  +  + +K D  A   D ++++ L      +  M +      A S   +   + A
Sbjct: 5   VTYLLITAAHFEKKDYSACREDCLKAVDLGRENRADFKMIAKAFSRVASSYAKEGDFKNA 64

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +  +K    +  PE          +    KLK   RL  ++ E  E    +   A + G
Sbjct: 65  VLYYDKSLAEHRTPETLK-----KRQEVEKKLKELDRLAYVDPEKSEEEKALGNAAFQKG 119

Query: 340 SIDQAHAKAMLAMKIAPR 357
               A      A+K  P 
Sbjct: 120 DYPTARKHYTEAIKRNPD 137


>gi|85705716|ref|ZP_01036813.1| TPR domain protein [Roseovarius sp. 217]
 gi|85669706|gb|EAQ24570.1| TPR domain protein [Roseovarius sp. 217]
          Length = 595

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 65/169 (38%), Gaps = 1/169 (0%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L+  ++     +Y++A E  + + +   +   A         R G  ++A     +   I
Sbjct: 320 LMAAELLEGLERYDLAIEAFKQVPRDHPSYHLAELGRSDVLRRAGKPDAAIEVLEQLATI 379

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            PD P V  AV   Y   ++++ A+   ++          ++  +  AR++ +    +  
Sbjct: 380 YPDLPEVHVAVGDLYRSQEDFASAVPAYDRALDLYSARGSDQWFVHYARAISHERLDNWP 439

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291
            +  D   +L+L  +          +++ ++    +A  ++E+     P
Sbjct: 440 EAEADFRRALELNPDHPQVLNYLGYTMVEKHINLDEALNMIERAVAAQP 488



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 31/287 (10%)

Query: 81  YDKGYKALYTGLMS----IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
            D+G   L  G+++    +   ++  A      V+++    +  + +  +     +   +
Sbjct: 145 EDRGVGDLADGMIAAWADLGKGDMTSALARFDAVAEERGLRSFAIYH--KALALASVGDF 202

Query: 137 NIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             A +    E    I  TR   V        ++G+   A            D      + 
Sbjct: 203 EGADKVFSGEDDAPIQRTRR-GVIGWAQVLSQLGEQTRAISIIDDTFGSDLDHE---ISA 258

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           ++  + A         +     N+     +     + R+L      + I  Y    E +K
Sbjct: 259 LRASLEAG------ESVPFNLVNSASDGISEVFFSLGRALMQEANDEYILIYARVAEMIK 312

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP-----EIANIYTHLLSENT 307
                + A + AA+ L  +  +R    I  + +K  P  HP     E+        +   
Sbjct: 313 --PAHVDAILMAAELL--EGLERYDLAI--EAFKQVPRDHPSYHLAELGRSDVLRRAGKP 366

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              ++   +L  I  +  E  V V  +         A      A+ +
Sbjct: 367 DAAIEVLEQLATIYPDLPEVHVAVGDLYRSQEDFASAVPAYDRALDL 413


>gi|148241045|ref|YP_001220546.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146411421|gb|ABQ39874.1| putative exported protein of unknown function with TPR repeats
           [Bradyrhizobium sp. BTAi1]
          Length = 421

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 8/192 (4%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +   +A  A   + D   V  A  Q      +   AI   NQ  K+ +   + R +LL 
Sbjct: 13  AATLVFAMTAAASATDTSEVARAAFQAK-DRGQLLMAIGLFNQAMKDEQLSKKQRGLLLF 71

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            R       G   A+  D    + L  +        A   I++ +  +A + L++  ++ 
Sbjct: 72  GRGTAYQQLGITEAALTDLDGVVALLPDFPGGYAYRAVIWIAERRYGEALMDLQQAHQLA 131

Query: 291 PHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P+       + N+Y    +      ++   +   +  +  ++    +   +      +A 
Sbjct: 132 PNDASVLLNLGNLYA--QTGRLELAIENYGQAIGLRPDFDKAYFDRAGAYMVKHDFARAM 189

Query: 346 AKAMLAMKIAPR 357
           A    A+++ P 
Sbjct: 190 ADFDKAIELRPT 201


>gi|31213431|ref|XP_315659.1| AGAP005640-PA [Anopheles gambiae str. PEST]
 gi|21299587|gb|EAA11732.1| AGAP005640-PA [Anopheles gambiae str. PEST]
          Length = 931

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 19/164 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 569 RAAYFEKNH-GTRESLETLLQKAVAHCPQSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 626

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +L N D+   
Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDE--- 683

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +     +++K+           AK  + + +  + + +LE+ 
Sbjct: 684 --ALSLLEDAVKVFPEF-------AKLWMMKGQIEEQKQLLERA 718



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 74/225 (32%), Gaps = 22/225 (9%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   + +  +   +      
Sbjct: 278 INDIKKARMLLKSVRETNPYHPPAWIASARLEEVTGKLQMARNLIMRGCEQNPQSEDLW- 336

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 337 -------LEAARLQPPDTAKGVIAQAARRIPTSVRIWIKAADLETEPKAKR---RVFRKA 386

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +      +   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 387 LEHIPNSVRLWKAAVEMENPEDAKILLSRA---VECCGTSVELWLALARL----ETYENA 439

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHA 388
                 A +  P    I+   A++E+AN +N   +      AL +
Sbjct: 440 RKVLNKAREKIPTDRQIWTTAAKLEEANGNNH-MVEKIIDRALSS 483


>gi|302406332|ref|XP_003001002.1| small glutamine-rich tetratricopeptide repeat-containing protein A
           [Verticillium albo-atrum VaMs.102]
 gi|261360260|gb|EEY22688.1| small glutamine-rich tetratricopeptide repeat-containing protein A
           [Verticillium albo-atrum VaMs.102]
          Length = 697

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 69/223 (30%), Gaps = 29/223 (13%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQ----- 197
           Q P        +LY +    GD + A  +  KAL   PD     + +     +++     
Sbjct: 374 QDPEALVLRGRALYCQ----GDNDKAISHFRKALSCDPDMRDAVKWLRVVQKLERMKGEG 429

Query: 198 --YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                A +W  AI       +         + +L  R+L      +  A+  D   +++L
Sbjct: 430 NAEYKAGQWQAAIDKYTAALEIDPTNKGTNSKILQNRALCRTKLKEYDAAIADCERAVQL 489

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                 A    A +L S  +   A       WK             L  E+     +   
Sbjct: 490 DPTYTKARKTKANALGSAERWEDAVK----EWKSIQ---------ELDPEDRTIAKEIRK 536

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              E+ K   +    + +I+ +        A   LA+   P K
Sbjct: 537 AELELKKSKRKDYYKILQISKDADDTQIKKAYRKLAIVHHPDK 579


>gi|258544627|ref|ZP_05704861.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258520135|gb|EEV88994.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 574

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 41/246 (16%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQR 175
             +  V  L  Q+  +   Y  A +    +L        + ++ +   + R      A  
Sbjct: 278 PQDATVRQLVAQLYASAGDYPAALQAFREILDAHRIDLNSYLFFVANAAERANQKEMAAT 337

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------- 220
              +    SP      E +       K++  A       +++  +               
Sbjct: 338 LLDEISKDSPRYLQAQERLALLAFARKDYDAAQERFAALRQDFPDDAQVLDTYLMEAAQL 397

Query: 221 -----WNRNRAILLIARSL-------------ENADKGDMIASYHDAIESLKLCDNSIMA 262
                W R   +L  A +               +A +GD+  +     + L +   +I A
Sbjct: 398 QQAQQWKRLEKLLKAALARYPEQVDLLYVLAELHAARGDLKEAEEQFNKILAIDPANIDA 457

Query: 263 SICAAKSLISQN-KKRKAEVILEKIWKVNP-HPEI-----ANIYTHLLSENTVGKLKRAL 315
                  L++Q   ++KA  ++E   K+ P  P I       +Y    +E+ +  L+RA 
Sbjct: 458 LNAYGYLLLTQGDDEKKAAQLIEAAIKLYPDSPAIQDSYGWLLYRQGKTEDALNWLRRAY 517

Query: 316 RLEEIN 321
                N
Sbjct: 518 AAYRSN 523



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 104/281 (37%), Gaps = 29/281 (10%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI- 149
           GLM+     +  A K  S          E  + L++ Q+  +  +   A + ++ +    
Sbjct: 186 GLMAKEQGKVTTAVKAFSDAIALDGNWRE--LELMQAQVLASIGKLQEARKIMDRITTRY 243

Query: 150 -PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                  + Y     +        A   A +  ++ P    V + V Q Y  A ++  A+
Sbjct: 244 PQDINLLSAYIDMLIAHYQ--WQDAITLALRWKELRPQDATVRQLVAQLYASAGDYPAAL 301

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----SI 264
               ++  +A   + N  +  +A + E A++ +M A+  D  E  K     + A    ++
Sbjct: 302 QAF-REILDAHRIDLNSYLFFVANAAERANQKEMAATLLD--EISKDSPRYLQAQERLAL 358

Query: 265 CA-AKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYT-HLLSENTVGKLKRALRLEE 319
            A A+      ++R A   L + +     P+ A   + Y           + KR  +L +
Sbjct: 359 LAFARKDYDAAQERFAA--LRQDF-----PDDAQVLDTYLMEAAQLQQAQQWKRLEKLLK 411

Query: 320 IN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  E V+ L +++++    G + +A  +    + I P
Sbjct: 412 AALARYPEQVDLLYVLAELHAARGDLKEAEEQFNKILAIDP 452


>gi|254428505|ref|ZP_05042212.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
 gi|196194674|gb|EDX89633.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
          Length = 389

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 50/223 (22%)

Query: 82  DKGYKAL-------YTGL---MSIAA-----HNIPLARKMHSYVSQQHTFHNEYL--VYL 124
           DKG +AL         GL   +++            A ++H+++ +   +       + L
Sbjct: 54  DKGIEALLNSLDVSEEGLETHLALGKLFRKRGEFDRAAQLHTHLLEHGDYGRPVQEEIQL 113

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
              Q  LA   +++A + L  ML               ++                    
Sbjct: 114 ELAQDYLASGIFDLAEQVLLEMLDQD-----------CQAKD------------------ 144

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                V E ++  Y   ++W  AI+   +  KN        A     ++      GD   
Sbjct: 145 ----EVCEQLMGLYEQERDWVNAISMGERLLKNRANLAPVLAQFCCEQAETLRRDGDTNP 200

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +      +L   +  + AS+      + ++    A    +++W
Sbjct: 201 ARRMLRRALSFDNQCVRASLAEGDLEMEESNWGAAIDAFQRVW 243


>gi|171912095|ref|ZP_02927565.1| peptidase C14 caspase catalytic subunit p20 [Verrucomicrobium
           spinosum DSM 4136]
          Length = 659

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 81/253 (32%), Gaps = 17/253 (6%)

Query: 115 TFHNEYLV-YLLEVQIALAERQYNIAHEKLEMMLQIP---ATREFAVYSLYFESCRIGDL 170
               E L   L + Q A   R ++ A +  E+ L+      T+   + +L          
Sbjct: 24  AAEQEDLAKRLAQAQSAQRSRNFDEAIDAYELALKSDLGSTTKTVVLINLGAAYNGKRQW 83

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A      A  + P+ P     +            ++    Q  K         A    
Sbjct: 84  DKAVPCFEAAQMLQPEQPASWYFMGDSLFALNRLEESLAAYTQAIKLLP----KEAAFYS 139

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            R+      G    +  D   +++    + +     A    +Q+    AE    +  +++
Sbjct: 140 GRASLFLKMGKYELALEDCDAAVRFEPKTALHYDKRAAVYYAQSNIPAAERNYTEAIRLD 199

Query: 291 PHPEIAN-----IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           P    A      +Y H    +  +  L  AL+L     E   +    +++   MG   +A
Sbjct: 200 PANVSALNNRGVLYLHTQQWDKAIADLSLALKLA---PEHDSARCNRAQVFAGMGDWARA 256

Query: 345 HAKAMLAMKIAPR 357
            +    A+K+ PR
Sbjct: 257 KSDYQEAVKLFPR 269


>gi|332305153|ref|YP_004433004.1| sulfotransferase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172482|gb|AEE21736.1| sulfotransferase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 662

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 48/221 (21%)

Query: 160 LYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKN 217
           L   + R+ GD   A     + L+ SP+     +     Y    ++   A  F    + N
Sbjct: 55  LLVVAQRLNGDFQQALASNARLLESSPEHARAWQENGYIYSALQEQQKSAQAFYQATQLN 114

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               +  RA+  +     N     +  +  D + +L          I  AK L+ +    
Sbjct: 115 PALLSSWRALQPLYIQQGNVKAATIAQAQIDYLAAL-------PKPILGAKDLMCEGDLH 167

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            A+ +                                 +  + NK   E+++++++I ++
Sbjct: 168 SADKV-------------------------------CRQFLQANKHHPEAMLLLAEIGIQ 196

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLL--------LAQIEQA 370
           +    +A       + + P      L        +A+ E A
Sbjct: 197 LKVYGEADFILSSCLALYPDHSGAGLTYLQLLAKMAKFEDA 237


>gi|324510929|gb|ADY44563.1| Adenosine monophosphate-protein transferase FICD [Ascaris suum]
          Length = 475

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 271 ISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE----EINKESV 325
             +   RKAE I++    + P HP+I   Y  L+ E     L  A  L       N    
Sbjct: 131 RKKGNMRKAETIIQHALALAPNHPDILTEYGILV-ETVRKNLVEAEELYTRALSYNPHHT 189

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           E+LV  ++    +  ID    K + A++   RK  + L  +I + +      +  
Sbjct: 190 EALVRRARTLPLVEEID---KKMLKALR---RKRAYFL--RIPRNSPALKRAMRE 236


>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 484

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 15/175 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD----ISPDA 187
               + A + L+ M+++    E   Y L  E  C+ G  + A +   K ++    + P +
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363

Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                P    ++++      + S+A T + Q  K            L      ++ +G  
Sbjct: 364 TLHLEPSAYNSMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 419

Query: 243 IASYHDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +++      L+   +S  ++     +S + +N+   A+  L+ + + +  P+ A
Sbjct: 420 DSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 474


>gi|302809168|ref|XP_002986277.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
 gi|300145813|gb|EFJ12486.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
          Length = 668

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 26/305 (8%)

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
           R F    A+L     K    +   A     +     ++  A K        + F+   LV
Sbjct: 332 RDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLANAEKHAELAVLNNRFNACALV 391

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
              +            A +  +    +      A+Y+L     ++     A     K   
Sbjct: 392 N--QGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVFKKISY 449

Query: 183 ISPDAPWV------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           + P+   V         V+     A +W   +  L  K  +        A LL       
Sbjct: 450 VLPNNTEVLFQIGQVSDVMGNSRQAIKW---LELLVSKVMH-------DAGLLAMLGNLY 499

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294
               D   + H   ES ++C   ++ +       +      KA    +   ++  HP+  
Sbjct: 500 VRCEDDAKALHYFSESHRVCPTDVVVTAWLGSFYLQNELYEKAMPFFQLASRI--HPDEV 557

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               +        + +    L +  ++   + ++ E L  +  +   +G   +  A    
Sbjct: 558 VKWKLKVALCLRRTGSFSKALHKYKQILNAHPDNAECLHCLVHLCTSLGRKMEVQAYESK 617

Query: 351 AMKIA 355
             K+ 
Sbjct: 618 LWKVD 622


>gi|255035013|ref|YP_003085634.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254947769|gb|ACT92469.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
           18053]
          Length = 399

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 32/254 (12%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
             +  F  E        Q A A    N      E   Q   +  F +      +  +G++
Sbjct: 70  RARIYFERE--------QYAEALDDIN--ESIYE---QDNVSEYFLLRG--KINRELGNI 114

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           ++A   A +A  +   +P +   +         +  A  +LNQ  + A            
Sbjct: 115 DNALEDAQRAEALQQSSPELYVLLADILQAKNRFGEAAGYLNQALRMAP----YDGSAYY 170

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            + +  A +GD +AS      ++ +    + A        +      +A  I EK   +N
Sbjct: 171 VKGMLQAKQGDSLASLSSLNYAMNVNPRLLRAYEQGTIINLKLKNTAEALAINEKA--LN 228

Query: 291 PHPEIANIY--------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             PE A+++             +     L    +   I  +  E+L  ++ +A++  +  
Sbjct: 229 RFPERASLFYGRGEILNALAQPDTA---LIFYQKALAIQPDYDEALNALATVAMQQRAYP 285

Query: 343 QAHAKAMLAMKIAP 356
            A       ++  P
Sbjct: 286 AAIPALKKLLRKKP 299


>gi|218260152|ref|ZP_03475571.1| hypothetical protein PRABACTJOHN_01232 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224711|gb|EEC97361.1| hypothetical protein PRABACTJOHN_01232 [Parabacteroides johnsonii
           DSM 18315]
          Length = 480

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 26/231 (11%)

Query: 127 VQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYA---TK 179
            ++      Y  A E  +  L         +    Y LY        +      A     
Sbjct: 203 GRLYSISGDYEKAIEAFDFALTCDDSDEELKILKAYCLYMNENYEKAIEVYNDIATTDET 262

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            + I+P          + YV  + + +A   L ++ K   +     +   I       + 
Sbjct: 263 RIRITPLLA-------ECYVKLENYEKAYVLLKEQLKQNNQLE--DSSTYINYIRCCVET 313

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV------NPHP 293
           G    +    +++ KL   +I      A + +    + KA    E+++            
Sbjct: 314 GRDEEASDVLMQASKLFPKNIRILSLLALTYLENGDEHKAMEATERLFTALDQVEDKQQE 373

Query: 294 EIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +  ++Y       +  +    L+   ++ E N E     + ++   L  G 
Sbjct: 374 DFESLYRAGQYLFMKGDIDKALQYYKKVLEANPEMPYMHLHMAMAYLAKGD 424



 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 22/219 (10%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           + +   A +   +         E  + +L+         Y  A E    +     TR   
Sbjct: 209 SGDYEKAIEAFDFALTCDDSDEE--LKILKAYCLYMNENYEKAIEVYNDIATTDETR--- 263

Query: 157 VY--SLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV--LAKEWSRAITFL 211
           +    L  E   ++ +   A     + L  +      +  +              A   L
Sbjct: 264 IRITPLLAECYVKLENYEKAYVLLKEQLKQNNQLEDSSTYINYIRCCVETGRDEEASDVL 323

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-----KLCDNSIMASICA 266
            Q  K   +  R  ++L +   LEN D+   + +      +L     K  ++   +   A
Sbjct: 324 MQASKLFPKNIRILSLLALTY-LENGDEHKAMEATERLFTALDQVEDKQQEDF-ESLYRA 381

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300
            + L  +    KA    +K+ + NP     H  +A  Y 
Sbjct: 382 GQYLFMKGDIDKALQYYKKVLEANPEMPYMHLHMAMAYL 420


>gi|193222309|emb|CAL61593.2| Putative response regulator receiver protein [Herminiimonas
           arsenicoxydans]
          Length = 542

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 63/159 (39%), Gaps = 9/159 (5%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +  K+ + AI   ++  K   +W  +   +L  ++    + G    +    +++L L  
Sbjct: 144 RLQKKDLAGAIAECDRVLKIEPKWIVD---ILKTKAGAALELGQNDEARRSYLQALGLRQ 200

Query: 258 NSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           + + A +  A+   ++ +  +A    + +LEK  +     ++         E+    L+ 
Sbjct: 201 DLVWAKLGLARCDQAEGRLEEAKIIVQGVLEKNAQYVDAYDLLAQIAESRGED-QQVLEA 259

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   +   +  S + V   A  +G ++QA +    A+
Sbjct: 260 LNKSYNVIPSARRSRM-VGDAAYRVGDLEQARSAYDKAL 297


>gi|170767100|ref|ZP_02901553.1| cellulose synthase operon protein C [Escherichia albertii TW07627]
 gi|170124538|gb|EDS93469.1| cellulose synthase operon protein C [Escherichia albertii TW07627]
          Length = 1157

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 70/195 (35%), Gaps = 5/195 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 357 QGDAALKANNPDQAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416

Query: 186 DAPWVTEAVVQQYVLAK-EWSRA-ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                   +   Y     E + A I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 417 SNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLSQQAEALENQGK 476

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300
              +     + L L   S+  +   ++ L    ++ +A+ ++  + +  P+ P+    Y 
Sbjct: 477 WAQAAALQRQRLALDPGSVWVTYRLSQDLWQAGQRTQADTLMRNLAQQKPNDPDQVYAYG 536

Query: 301 HLLSENTVGKLKRAL 315
             LS +   +   A 
Sbjct: 537 LYLSGHDQERAALAH 551



 Score = 39.9 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 104/351 (29%), Gaps = 65/351 (18%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++ A+N   A ++           +  ++ L    +A+A + Y  A    +
Sbjct: 352 WLAIQQGDAALKANNPDQAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409

Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181
             L++ ++   AV  L                      +   I D+  + +    + +A 
Sbjct: 410 QTLRMDSSNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLSQQAE 469

Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223
            +     W   A +Q+  LA +              W          L +     K  + 
Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWVTYRLSQDLWQAGQRTQADTLMRNLAQQKPNDP 529

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273
           ++          +  +   +A  ++   +           +L  + +   +  A  L   
Sbjct: 530 DQVYAYGLYLSGHDQERAALAHINNLPRAQWNGNIQELVNRLQSDQV---LETANRLRDS 586

Query: 274 NKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            K++ AE +L    +  P P    ++          +          +      + ++++
Sbjct: 587 GKEQDAEAML----RQQP-PSTRIDLTLADWAQQRRDDAAARAAYQNVLAREPNNADAIL 641

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
            ++++ +  G    A ++                   + QA   +T     
Sbjct: 642 GLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALVQAQLGDTAAAQR 692


>gi|163783224|ref|ZP_02178218.1| hypothetical protein HG1285_14409 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881558|gb|EDP75068.1| hypothetical protein HG1285_14409 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 207

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 17/112 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            Q AL E  Y  A       L++  T       +  L   S ++ D    ++Y  + +++
Sbjct: 77  AQTALLEGDYETAEWLYNEALKMDGTPYEAHLILNDLVLLSQKLKDFERMKKYCEEDIEL 136

Query: 184 SPDAPW--------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            P                    E  V       +   A+  + + +     +
Sbjct: 137 YPQYREELKKRSGGQLPQINAFEVYVYLLEREGKVKEALELVERIRSEGITY 188


>gi|90409035|ref|ZP_01217163.1| hypothetical protein PCNPT3_12073 [Psychromonas sp. CNPT3]
 gi|90309868|gb|EAS38025.1| hypothetical protein PCNPT3_12073 [Psychromonas sp. CNPT3]
          Length = 317

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 40/192 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNE--YLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATRE 154
             +  A ++H  +  + +   E   L  L L          ++ + E    + + P  +E
Sbjct: 10  GEVDRAIRIHQNLIARPSLTREQRDLALLQLGNDFYQ-SGLFDRSEEIFLQLKESPEYQE 68

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ- 213
            A+                                  E ++  Y   KEW  AI+   + 
Sbjct: 69  VAL----------------------------------EKLLNIYQQLKEWQEAISVTERL 94

Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            K  + K  NR  + L  + + E  +  D+        ++L      I A +  +   + 
Sbjct: 95  NKLVSGKNNNRTLSYLYCSLADELTELSDIKKKLGLYKKALATYPACIHAILALSDYYLD 154

Query: 273 QNKKRKAEVILE 284
           Q K  K+   LE
Sbjct: 155 QQKHHKSLQTLE 166


>gi|300694327|ref|YP_003750300.1| tpr repeat domain [Ralstonia solanacearum PSI07]
 gi|299076364|emb|CBJ35677.1| conserved hypothethical protein, tpr repeat domain [Ralstonia
           solanacearum PSI07]
          Length = 700

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/230 (11%), Positives = 60/230 (26%), Gaps = 45/230 (19%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            ++   + A  +A +A+ ++P +     A+        +   A+    Q  +        
Sbjct: 262 RQVERPDEALAFARQAVALAPRSAEAHHALAMALQALGQTDEALPHFEQAARLPGAVAEE 321

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVIL 283
               L+ R+    + G   A+     ++L+    S+ A    A +   +           
Sbjct: 322 ---ALVGRATLLMEAGRRDAALAAFDQALERFPGSVQALAGLADARTFTAGDS------- 371

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                     +IA +   L          R                 + K  L++    +
Sbjct: 372 ----------DIAALEACLAEGERRSLRDRISA-----------HFALGKAYLDLQDPAR 410

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDP 392
           A        +       +            +      W +    A  P+P
Sbjct: 411 AFHHLDAGNRQKRSTFTY------------DGAASSRWMERIAEAFPPEP 448


>gi|198470165|ref|XP_002133383.1| GA22864 [Drosophila pseudoobscura pseudoobscura]
 gi|198145323|gb|EDY72011.1| GA22864 [Drosophila pseudoobscura pseudoobscura]
          Length = 604

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 5/130 (3%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +    F S +      A      A  ++P    V + +   YV  K +  A T      +
Sbjct: 346 LRGNLFISLQR--YREAIEAFRNAQGLAPYRFEVYKGLFHCYVAQKRFKEAQTMCVWAIR 403

Query: 217 NAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +       R+  +  R+L  + +     ++     ++LK+  +   A    A+    +  
Sbjct: 404 S--FRTSPRSYTMFGRTLFHSTNPAAKRSARKFVEKALKIDSSYTPAVALMAEICQYEGA 461

Query: 276 KRKAEVILEK 285
            + A  +LEK
Sbjct: 462 TKAAIKLLEK 471


>gi|75076017|sp|Q4R5F5|IFIT1_MACFA RecName: Full=Interferon-induced protein with tetratricopeptide
           repeats 1; Short=IFIT-1
 gi|67970655|dbj|BAE01670.1| unnamed protein product [Macaca fascicularis]
          Length = 478

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 17/143 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 223 LALKLQDNGQEAEGEKYLEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIAS-YHDAIESLKLC-----------DNSIMA 262
                +    +   A+ ++  +  KG           + ++L                +A
Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKIDKMIRLAIFHFESAVENKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAEVILEK 285
            +  A+  I     RKAE   +K
Sbjct: 343 HLDLARMYIEAGNHRKAEETFQK 365


>gi|83311709|ref|YP_421973.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
           magneticum AMB-1]
 gi|82946550|dbj|BAE51414.1| Predicted O-linked N-acetylglucosamine transferase
           [Magnetospirillum magneticum AMB-1]
          Length = 639

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 66/229 (28%), Gaps = 14/229 (6%)

Query: 137 NIAHEKLEM-MLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           + A       + Q P + E A  + +L   +   G    A     +AL ++P        
Sbjct: 2   DEAEALYHRVLRQAPQSPEAAKSLTNLGVIAHGRGRTGEALTLHGQALALAPQLAEAWCN 61

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                         +         A + +                +GD   +      + 
Sbjct: 62  RGDLLSDLGR----LEEAEGDFVRACDLSPALLPAWFNLGNVRLRRGDTAQAEPCYRRAA 117

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLK 312
            L  +  +     A+ L +  +   A   +E  W++   P+   + T L + +   G+L 
Sbjct: 118 ALAPHLPLIHAQLARCLDAMGQAEGAADAMEAAWRLA--PDDWRLLTDLGALQQQAGRLH 175

Query: 313 RA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            A         +N     +   +  +    G   +A A    A  + P 
Sbjct: 176 AAQNSLRAAISLNPSHAAAHYNLGNVFYGEGRAAEAVACWQAAWSMDPS 224


>gi|120554730|ref|YP_959081.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
 gi|120324579|gb|ABM18894.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
          Length = 189

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 42/128 (32%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           E   A+ +  +  A    E + +    +   + +L   + R GD + A+ +  +A  ++P
Sbjct: 44  EAVKAMKQGNFTEARTVFEQLARNYPDKAGPMANLGIIAFREGDADGAKEWFERARAVNP 103

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +       +      A E+  A  +         ++      L     +   +  D I  
Sbjct: 104 EHVQALNHLGVIARNAGEFDEAERYYRAALAADPDYAPAILNLAFLLDIYLGNPADAIEL 163

Query: 246 YHDAIESL 253
           Y     + 
Sbjct: 164 YERYQSAA 171



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 7/139 (5%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
              + ++   N   AR +   +++ +      +  L    IA  E   + A E  E    
Sbjct: 43  SEAVKAMKQGNFTEARTVFEQLARNYPDKAGPMANL--GIIAFREGDADGAKEWFERARA 100

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWS 205
           +      A+  L   +   G+ + A+RY   AL   PD          ++  Y+     +
Sbjct: 101 VNPEHVQALNHLGVIARNAGEFDEAERYYRAALAADPDYAPAILNLAFLLDIYL--GNPA 158

Query: 206 RAITFLNQKKKNAKEWNRN 224
            AI    + +  A E +  
Sbjct: 159 DAIELYERYQSAASEPHPR 177


>gi|330837945|ref|YP_004412525.1| Tetratricopeptide TPR_2 repeat-containing protein [Selenomonas
           sputigena ATCC 35185]
 gi|329745709|gb|AEB99065.1| Tetratricopeptide TPR_2 repeat-containing protein [Selenomonas
           sputigena ATCC 35185]
          Length = 448

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
              K   +  A   + R++  A +G+   +  D   +L+L   S  A    A    +   
Sbjct: 287 AEKKLAEKKNAAAYVYRAIVFAKRGESERAAADLEAALRLSPKSAAALYDRALFFTAAGD 346

Query: 276 KRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330
           +++A+  LE + K    P+    +      +L +      ++   R+  +  +S  +   
Sbjct: 347 EKRAKADLEALIKAQ--PDFVYAWYNLGVMNLKAGRNNAAMRDFERVLALVPQSANAQSN 404

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +    +      +A      A +I   
Sbjct: 405 IGIALVREKKYREAWRAFAQAAEINTT 431


>gi|262304981|gb|ACY45083.1| acetylglucosaminyl-transferase [Eurytemora affinis]
          Length = 289

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 8/166 (4%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES 164
            ++   Q    H + L  L    I   +     A     + +   P     A  +L    
Sbjct: 42  CYNTALQLSPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAAHSNLASIL 98

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G LN A  +  +A+ I P        +        +   A+   ++  +    +   
Sbjct: 99  QQQGKLNEALLHYKEAIRIQPAFADAYSNMGNTLKEMHDVQGALQCYSRAIQINPAF--- 155

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 156 -ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200



 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            +    N   + +       A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVVESEECYNTALQLSPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++   P  A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASILQQQGKLNEALLHYKEAIRIQ--PAFAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ +  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMHDVQGALQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           K+ P 
Sbjct: 184 KLKPD 188


>gi|254675259|ref|NP_958795.2| plectin isoform 1g [Mus musculus]
          Length = 4550

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1404 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1463

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1464 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1523

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1524 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1564


>gi|224026080|ref|ZP_03644446.1| hypothetical protein BACCOPRO_02833 [Bacteroides coprophilus DSM
           18228]
 gi|224019316|gb|EEF77314.1| hypothetical protein BACCOPRO_02833 [Bacteroides coprophilus DSM
           18228]
          Length = 310

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 15/211 (7%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +  IG L  A +   +A  I  +       +V  Y  A     A   L +        + 
Sbjct: 36  ARNIGQLAYAIKCFEEATAIQ-EETETLSLLVTSYTQANRLDDARHTLERMIA----LDG 90

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            +A   I+ +     + D         ++++L     +A   AAK+ I  +    A  +L
Sbjct: 91  QQADTWISLAGVCYMQEDYKTMEEACRKAIELDSQKPLAYYFAAKAAIGLHNDFMAIAML 150

Query: 284 EKIWKVNPHPEIANIYTHLLSEN--TVGKLKRA----LRLEEINKESVESLVIVSKIALE 337
            K   +    +    Y  L +E    + ++K A      L  +N    ++L++ ++I   
Sbjct: 151 TKAILLKE--DYTEAY-QLRAETLWNMRQVKEAGEDIQVLLRMNPNDEQALLLDAEIQAA 207

Query: 338 MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
            G+ DQA  +    + + P +++ + LL ++
Sbjct: 208 TGNTDQAIGQLQQILSLNPFQEKAYFLLGEL 238


>gi|197117287|ref|YP_002137714.1| cobalamin-binding radical SAM domain-containing iron-sulfur
           cluster-binding oxidoreductase [Geobacter bemidjiensis
           Bem]
 gi|197086647|gb|ACH37918.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
           oxidoreductase with TPR domain [Geobacter bemidjiensis
           Bem]
          Length = 564

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            SY +Q+      ++  +L  +    +  ++ A      M++      + +  L     R
Sbjct: 428 ASYAAQRALLGYCFVTEMLCAESLEQQGDWDGALRLYRGMVKAEPDNPWGLLQLGGLQAR 487

Query: 167 IGDLNSAQRYATKALDISPDA 187
           +GD+  A R   KAL + P  
Sbjct: 488 MGDMKGASRSYQKALQLVPRH 508


>gi|330873309|gb|EGH07458.1| TPR domain-containing protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 556

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  + LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGISERA----YQIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--------- 222
           SA   A      +P       A   Q   A  +  ++ ++ +  +   + +         
Sbjct: 84  SALETALIWARNAPRDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143

Query: 223 ---------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
                                     L+  ++L     GD   S    +E     D  I 
Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKDGEIA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + ++A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 296



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            K+      Q    ++ L + L   + L  + +  A   LE ++   A  + A  +L   
Sbjct: 254 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 312

Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                D  SA   YA   +   PD            V     + A   L++ +    ++ 
Sbjct: 313 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 370

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L +  +        +   +    ++LK   +        A     +N   + E  
Sbjct: 371 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 427

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338
           L  I K  P   +A         +   +   A  L E       +    L  +  +   +
Sbjct: 428 LRSIIKREPENAMALNALGYTLSDRTTRYAEARELIEKAHQISPDDPAVLDSLGWVNYRL 487

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           G++D A      A++  P  E+   L ++  A   +  +       AL   PD
Sbjct: 488 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 539


>gi|168698258|ref|ZP_02730535.1| peptidase-like protein [Gemmata obscuriglobus UQM 2246]
          Length = 1380

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 85/291 (29%), Gaps = 50/291 (17%)

Query: 98  HNIPLARKMHSYV----SQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEM------ 145
            N   A+ M+        +     +  L   L     L         A E          
Sbjct: 159 GNTNDAKAMNERALAIRRKLLPVQHPDLGRSLNNLALLQANLGDRKEAAEGYRKAVCIWK 218

Query: 146 --MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQ- 197
             +        F + +L      + DL  A+R   +AL I         P +   +    
Sbjct: 219 AGLGADDPLVAFGLTNLGLVQHDLRDLEGARRSHQEALAIRRKALPKDHPDIASTLNNLG 278

Query: 198 --YVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                 ++   A       L+ ++K     +   A+ L    L   D  D+  +     E
Sbjct: 279 LVQRDLRDLEGARKSHQEALDIRRKMRPTGHSGVAMSLNNLGLVQRDLRDLEGARKSHQE 338

Query: 252 SLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKVN-----------P--HPEIAN 297
           +L +C  ++ A     A SL +    +     LE   K +           P  HP+IA+
Sbjct: 339 ALDICRKALPAGHPGVAMSLNNLGNAQYDLRDLEGARKSHEEALAIRRKALPKDHPDIAS 398

Query: 298 IY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                 +   +          LE   K   E  + + + AL  G    A +
Sbjct: 399 TLNNLGVAQHD-------LRDLEGARKSHQE-ALDICRKALPAGHPGVAMS 441


>gi|75906644|ref|YP_320940.1| hypothetical protein Ava_0419 [Anabaena variabilis ATCC 29413]
 gi|75700369|gb|ABA20045.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 224

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 5/171 (2%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           +N  L  LLE  +  +    YN A    +    +          + +   + G+  +A  
Sbjct: 35  NNAELKRLLEDGKRLVDAGDYNGAIAVYQQAATMEPRNARIHSGIGYLHAQQGNFQAALA 94

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A+ I+P+      AV        +   A        + A + NRN     +   + 
Sbjct: 95  SYRRAIAINPNNSDFFYAVGYIKGNMGDTPGAKE----AYRRAIQLNRNNVSAYVGLGIT 150

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +  GD  ++     +++KL  N+       A     + + ++A  +L+K 
Sbjct: 151 QSRMGDFQSANWAFEQAIKLDKNNAQTYEFMAAMYKQRRQTKQASNLLQKA 201


>gi|22125250|ref|NP_668673.1| fimbrial biogenesis protein [Yersinia pestis KIM 10]
 gi|45442519|ref|NP_994058.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108808315|ref|YP_652231.1| putative fimbrial biogenesis protein [Yersinia pestis Antiqua]
 gi|108811420|ref|YP_647187.1| fimbrial biogenesis protein [Yersinia pestis Nepal516]
 gi|145599498|ref|YP_001163574.1| fimbrial biogenesis protein [Yersinia pestis Pestoides F]
 gi|149365341|ref|ZP_01887376.1| putative fimbrial biogenesis protein [Yersinia pestis CA88-4125]
 gi|162418968|ref|YP_001605026.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           Angola]
 gi|165925883|ref|ZP_02221715.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937091|ref|ZP_02225656.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008363|ref|ZP_02229261.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212386|ref|ZP_02238421.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398612|ref|ZP_02304136.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421166|ref|ZP_02312919.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423678|ref|ZP_02315431.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470722|ref|ZP_02335426.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           FV-1]
 gi|170023537|ref|YP_001720042.1| type IV pilus biogenesis/stability protein PilW [Yersinia
           pseudotuberculosis YPIII]
 gi|218929941|ref|YP_002347816.1| putative fimbrial biogenesis protein [Yersinia pestis CO92]
 gi|229838461|ref|ZP_04458620.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895162|ref|ZP_04510338.1| putative fimbrial biogenesis protein [Yersinia pestis Pestoides A]
 gi|229899028|ref|ZP_04514172.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901677|ref|ZP_04516799.1| putative fimbrial biogenesis protein [Yersinia pestis Nepal516]
 gi|270489872|ref|ZP_06206946.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           KIM D27]
 gi|294504557|ref|YP_003568619.1| putative fimbrial biogenesis protein [Yersinia pestis Z176003]
 gi|21958121|gb|AAM84924.1|AE013738_1 putative fimbrial biogenesis protein [Yersinia pestis KIM 10]
 gi|45437384|gb|AAS62935.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108775068|gb|ABG17587.1| fimbrial biogenesis protein [Yersinia pestis Nepal516]
 gi|108780228|gb|ABG14286.1| putative fimbrial biogenesis protein [Yersinia pestis Antiqua]
 gi|115348552|emb|CAL21492.1| putative fimbrial biogenesis protein [Yersinia pestis CO92]
 gi|145211194|gb|ABP40601.1| fimbrial biogenesis protein [Yersinia pestis Pestoides F]
 gi|149291754|gb|EDM41828.1| putative fimbrial biogenesis protein [Yersinia pestis CA88-4125]
 gi|162351783|gb|ABX85731.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           Angola]
 gi|165914954|gb|EDR33566.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922087|gb|EDR39264.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992745|gb|EDR45046.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206317|gb|EDR50797.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960655|gb|EDR56676.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051116|gb|EDR62524.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057848|gb|EDR67594.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169750071|gb|ACA67589.1| type IV pilus biogenesis/stability protein PilW [Yersinia
           pseudotuberculosis YPIII]
 gi|229681606|gb|EEO77700.1| putative fimbrial biogenesis protein [Yersinia pestis Nepal516]
 gi|229687973|gb|EEO80045.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694827|gb|EEO84874.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701924|gb|EEO89947.1| putative fimbrial biogenesis protein [Yersinia pestis Pestoides A]
 gi|262366545|gb|ACY63102.1| putative fimbrial biogenesis protein [Yersinia pestis D182038]
 gi|270338376|gb|EFA49153.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
           KIM D27]
 gi|294355016|gb|ADE65357.1| putative fimbrial biogenesis protein [Yersinia pestis Z176003]
 gi|320016018|gb|ADV99589.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 249

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+     A + LE  ++           + F + RIG+ ++A++   +A+
Sbjct: 35  TRLQLGLAYLAQGDLTAARKNLEKAVEADPQDYRTQLGMAFYAQRIGENSAAEQRYQQAM 94

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +             ++              
Sbjct: 95  KLAPGNGTVLNNYGAFLCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYC--FLRANQ 152

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 153 DKQARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194


>gi|330975574|gb|EGH75640.1| TPR repeat-containing protein [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 556

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  + LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217
           SA   A      +P       A   Q   A  +  ++ ++ +  +               
Sbjct: 84  SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143

Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             + +    +L                +  ++L     GD   S    +E     +  I 
Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + D+A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 74/205 (36%), Gaps = 7/205 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    + ++  N   A K  S    +        +YL+E +   +  Q +   + L   L
Sbjct: 340 LRQADILVSNGNGAEAAKRLSEARAEE-PDYAVQLYLIEAETLTSNDQLDRGWQVLNQAL 398

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206
           +        +Y+    + +  DL   ++     +   P+      A+          ++ 
Sbjct: 399 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYTE 458

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   + +  K + +       +L +    N   G++  +     ++L+   +  +A+   
Sbjct: 459 ARELIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 513

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
            + L ++ ++R+A+ +  K  +  P
Sbjct: 514 GEVLWAKGEQREAKKVWAKALEQQP 538


>gi|168000971|ref|XP_001753189.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695888|gb|EDQ82230.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 383

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 72/283 (25%), Gaps = 44/283 (15%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
                D G   +   L++  A N+    +  S   +        L   L   +A      
Sbjct: 114 RVSRRDLGLFGISLPLLAGFASNLE--AEAASRSVRLKDVEYPKLQEALRAAVA---GDL 168

Query: 137 NIAHEKLEMML-QIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             A      ++ + P +    +       S +      A    TKA+ ++PDAP      
Sbjct: 169 EKAETMFSELIEEDPKSASVWSNRGSVRVSLQK--YEQAAEDFTKAIALAPDAPVPFLNR 226

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              Y     +  AI        N  E                    D  A+ +    + +
Sbjct: 227 AISYEAMGRFDDAIADCKTAIINDPE----EYAAWFNLGNVEVRVRDYDAALNAYSRASR 282

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
           L        +  A  L   N+  +   +                                
Sbjct: 283 LAPGIAGYRLKEALVLFELNRLEECRKL-------------------------------V 311

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             L        E+  +++ +  + G+ D A  +   A    PR
Sbjct: 312 QGLVRKYPNYAEAHAVLAAVLWKEGNRDLAEGQFSEATVREPR 354


>gi|90075104|dbj|BAE87232.1| unnamed protein product [Macaca fascicularis]
          Length = 478

 Score = 42.6 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 17/143 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 223 LALKLQDNGQEAEGEKYLEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIAS-YHDAIESLKLC-----------DNSIMA 262
                +    +   A+ ++  +  KG           + ++L                +A
Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKIDKMIRLAIFHFESAVENKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAEVILEK 285
            +  A+  I     RKAE   +K
Sbjct: 343 HLDLARMYIEAGNHRKAEETFQK 365


>gi|317123705|ref|YP_004097817.1| serine/threonine protein kinase [Intrasporangium calvum DSM 43043]
 gi|315587793|gb|ADU47090.1| serine/threonine protein kinase [Intrasporangium calvum DSM 43043]
          Length = 827

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 45/172 (26%), Gaps = 15/172 (8%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL ++   + P A+   + V  Q     E    L     +       +A        + 
Sbjct: 620 QGLAALERGDAPSAQAAFNAVYGQ--VPGELAPKLALAHASEKAGDDAVAENLYVACART 677

Query: 150 PATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            +T    A + L       GD++ A      A  + P                   +  +
Sbjct: 678 DSTYVPMAAFGLARIRAARGDVDGAVA----AYRLVPTQSSA------YRTARAGLAELL 727

Query: 209 TFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              N+   +  E  R  A   L AR            +     E+     + 
Sbjct: 728 ARANRGLPDLAEALRTLADTSLTARRRAEVTTHIYREALASVREA-GAQPDL 778


>gi|290982719|ref|XP_002674077.1| TPR domain-containing protein [Naegleria gruberi]
 gi|284087665|gb|EFC41333.1| TPR domain-containing protein [Naegleria gruberi]
          Length = 724

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 82/231 (35%), Gaps = 16/231 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     + +  E +L++ +    A+  L      +GD+ +++R   KAL ++ +   V  
Sbjct: 117 DGNTEESKKLYESVLELNSKNVSALSGLAACYLLLGDIPASKRLIEKALKVNSEYYHVYH 176

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                Y    ++  AI   NQ       + R+       ++L       +  +  +  E 
Sbjct: 177 VRGMIYDEEGDYENAIKMYNQSSFLNPMYARS----HYNKALSYEKLFLIEQAIDEYREC 232

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEV----ILEKIWKVNPHPEIANIYTHLLSENTV 308
           ++L    I +    +   +   +K +A      IL K    N   +I++ +  +  +   
Sbjct: 233 IRLDSTHISSHQNLSYCYLQMGEKDRAIKILHEILSKNIDANSMADISDSFREIGDDE-- 290

Query: 309 GKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              K    L     ++  + E  +  + +   M     A    + A ++ P
Sbjct: 291 ---KACQVLTSAISLDPTNAEIYIRRADLYKHMEKKSLALMDYLKACELDP 338


>gi|170750467|ref|YP_001756727.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170656989|gb|ACB26044.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 622

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 64/302 (21%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKM---------------HSYVSQQHTFHNEYLVYLLEV 127
           + Y A   GL++    +   A +                 +Y   + +     L      
Sbjct: 183 RDYHA---GLIASVTGDNAEAERRLKAAYDADHNTLRIVDAYARMEASLGRTDLAIQAYS 239

Query: 128 QIALAERQYNIAHEKLEMMLQ-IPATREFA---------VYSLYFESCRIGDLNSAQRYA 177
                  ++ +  + LE + +  P TR            +Y L       GD   A  Y 
Sbjct: 240 DFDQLSPRHPLVRDALEKLKEGKPLTRLIGTAQEGAAEVLYGLGSAGSTQGDELPAVIYL 299

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             AL ++PD       +       K+  RA       +  A    +  A + I  +LE  
Sbjct: 300 RLALYLAPDHALARLTLADTLDRMKQPERANEAY--AQIPANSPLKLNADIQIGLNLEQM 357

Query: 238 DKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            KGD   +    A+++     + I A              ++A    E+          A
Sbjct: 358 GKGDEALAHLDAAMKAHPDDIDVITA----------LGNVQRARKKYEEA---------A 398

Query: 297 NIYTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             YT            RA+ L           +               +A A    A+ +
Sbjct: 399 ATYT------------RAIDLIGDRPQSNYWTTYYFRGTAYERAKQWPKAEADLKKALSL 446

Query: 355 AP 356
            P
Sbjct: 447 VP 448



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 16/246 (6%)

Query: 123 YLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L   IA A R    A     E +   P   E    + +      G L  A R A K +
Sbjct: 48  NFLSAYIAGASRDTAAAATFYREAVKADPRNAELVERA-FISLLADGALPDAFRTAEKLI 106

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              P       ++  + + A +W+ A    ++  + A       A LL A S   A  G 
Sbjct: 107 ARDPTNGLANLSLGVRQIKAGQWAAARQNFSRSGRGA--ATDLTATLLTAWSYAGAGDGK 164

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
                 + +   +  +        A           +AE  L+  +  + H  +  +  +
Sbjct: 165 KALETVNKLRGERYYNTFR--DYHAGLIASVTGDNAEAERRLKAAYDAD-HNTLRIVDAY 221

Query: 302 LLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              E ++G+    ++     ++++         + + ALE     +   + +   +    
Sbjct: 222 ARMEASLGRTDLAIQAYSDFDQLSPRHP-----LVRDALEKLKEGKPLTRLIGTAQEGAA 276

Query: 358 KEIFLL 363
           + ++ L
Sbjct: 277 EVLYGL 282


>gi|158285098|ref|XP_308135.4| AGAP003902-PA [Anopheles gambiae str. PEST]
 gi|157020735|gb|EAA03879.4| AGAP003902-PA [Anopheles gambiae str. PEST]
          Length = 585

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P    + +A+V  Y+       A   L   K         R ++L+AR+    +     
Sbjct: 370 APYRYEIHKALVDNYLNMGRNREAQ--LQALKAVKMLGESARMLVLLARTYMKDEAARP- 426

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +    +++L++ +N + A    ++  + +N       +L+K
Sbjct: 427 KAKALCLKALEMSENFLPAVYLLSEIYLRENDISTRMKLLKK 468


>gi|66044200|ref|YP_234041.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254907|gb|AAY36003.1| TPR repeat:TPR repeat [Pseudomonas syringae pv. syringae B728a]
          Length = 556

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  + LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217
           SA   A      +P       A   Q   A  +  ++ ++ +  +               
Sbjct: 84  SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143

Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             + +    +L                +  ++L     GD   S    +E     +  I 
Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + D+A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296



 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 74/205 (36%), Gaps = 7/205 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    + ++  N   A K  S    +        +YL+E +   +  Q +   + L   L
Sbjct: 340 LRQADILLSNGNGAEAAKRLSEARAEE-PDYAIQLYLIEAETLTSNDQLDRGWQVLNQAL 398

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206
           +        +Y+    + +  DL   ++     +   P+      A+          +S 
Sbjct: 399 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYSE 458

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   + +  K + +       +L +    N   G++  +     ++L+   +  +A+   
Sbjct: 459 ARDLIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 513

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
            + L ++ ++R+A+ +  K  +  P
Sbjct: 514 GEVLWAKGEQREAKKVWAKALEQQP 538


>gi|300865616|ref|ZP_07110390.1| hypothetical protein OSCI_2080002 [Oscillatoria sp. PCC 6506]
 gi|300336371|emb|CBN55540.1| hypothetical protein OSCI_2080002 [Oscillatoria sp. PCC 6506]
          Length = 1330

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 63/207 (30%), Gaps = 46/207 (22%)

Query: 158 YSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           Y    E  +  G+ + A     +A++++PD  W    +    +    W  A     Q  K
Sbjct: 738 YHYLGEILQELGEDDRAIAVYRRAIELNPDFCWSYNNLGDILMQLSRWEEAAAAYRQGIK 797

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              ++      L            D   +      S+ L  +          S  S  + 
Sbjct: 798 INPDF----CWLYNKLGEALVKISDWEEAADAYRRSIDLNPDFC-------WSYYSLGE- 845

Query: 277 RKAEVILEKI--WKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIV 331
                +LE+   W+        + Y     L +E+T  + K    L ++           
Sbjct: 846 -----VLEEQQYWEEA-----VSAYQRAVELEAEDTWMRKKLGDGLRQL----------- 884

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358
                  G  D+A A    A++I P+ 
Sbjct: 885 -------GLWDEAMAIYEQAIEIDPKA 904



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           +    +       +  L  LL  +        + A       L+I      A +SL    
Sbjct: 139 RQAIKLKPDAFGSHHSLGKLLAAK-----GNIDEAIACQYKSLEINPNYVRAYHSLGNVL 193

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            + G+L+SA  Y +KA++++P+  W   ++   ++  + W +AI    +  +   +
Sbjct: 194 VQKGELDSAIAYYSKAIELNPNYCWSYNSLGDVFLKQERWDKAINSYQKAIEMKGD 249


>gi|256829653|ref|YP_003158381.1| hypothetical protein Dbac_1874 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578829|gb|ACU89965.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 793

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 80/281 (28%), Gaps = 21/281 (7%)

Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPD 186
                R+Y  A    E  +    + R  A+ Y+L   +    D   A           P 
Sbjct: 42  ALHQSREYEEALRAFEQAVFLKASARVQALPYALSLSALHRHDEAIALL--EPLQAKKPK 99

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              +   +      A  + +A+      +K             +     +   G+  A+ 
Sbjct: 100 DFDLINLLGVMLKRAGRFEQALGMFELARKLRP----RLVSAWVNTGNVHEAMGNFQAAA 155

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHL--- 302
               E+ +L   +         SL  Q +   A   L++   + P  P     +  +   
Sbjct: 156 EAFGEAARLEPRNAELWRLQGASLFRQRRTEPALQALDRAASLAPADPASFRTHVQVLAK 215

Query: 303 --LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
               +     ++R            E  +++++I    G ID A       +   P    
Sbjct: 216 LGRHDEAAAAIERFR---AARPGDPEPAIMLARIRYNAGRIDDARKLLAEVLADEPGHLS 272

Query: 361 FLLLAQIEQANS---HNTDKILYWTQSALHAMPDPLWISDD 398
             LL      +     +        + AL A PD  W + +
Sbjct: 273 ANLLLAQTCGDGTAEGSRRMANDALRRALAANPD-AWQAAE 312


>gi|118471199|ref|YP_886221.1| hypothetica lprotein [Mycobacterium smegmatis str. MC2 155]
 gi|118172486|gb|ABK73382.1| tetratricopeptide repeat protein, putative [Mycobacterium smegmatis
           str. MC2 155]
          Length = 340

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 44/166 (26%), Gaps = 6/166 (3%)

Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            Q       Y  A E L   + Q P   E  +         + D   A   A  A+  +P
Sbjct: 12  AQAYFDSGNYMRAEEVLRSALAQDPDNPEL-LAGYAQARLGLNDYQGAAWAAHSAIAKAP 70

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                              + A+    +      +      I   A +      G    +
Sbjct: 71  TNEHAKRIYAFALSGQGRNADALQVAWKSVTEHPDVY----IAHYAYANLLLSAGQAQQA 126

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                E+L+L   +  + +       + N    AE    +  ++ P
Sbjct: 127 LTAINEALRLNPTAPDSWVLRGDIYRALNWMAPAEADYREALRLQP 172


>gi|40849910|gb|AAR95667.1| plectin 2 [Mus musculus]
          Length = 4534

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1388 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1447

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1448 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1507

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1508 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1548


>gi|40849922|gb|AAR95673.1| plectin 8 [Mus musculus]
          Length = 4543

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557


>gi|81428417|ref|YP_395417.1| hypothetical protein LSA0804 [Lactobacillus sakei subsp. sakei 23K]
 gi|78610059|emb|CAI55108.1| Hypothetical protein LCA_0804 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 219

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 5/155 (3%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           A  Q+  A ++L   L+   T   A  +L      + D   A+    KAL   P+   + 
Sbjct: 10  AAGQHEEAVQQLVDYLEKTPTDIEAYVTLATFLTTLKDYEQAEVLLQKALTQFPENDALQ 69

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A+   Y  A+ + +A T  +Q  K  +  +    +      LE         +   A+ 
Sbjct: 70  YALGTLYYQAEAYQQAETTFSQLVKETQALDAQYMLAQTYHQLE-----QNARAMAFALT 124

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + + A+I     LIS     +A+   +  
Sbjct: 125 VQEKQPDQLDANILVGNILISLGDFDQAQTYFKNA 159


>gi|119774582|ref|YP_927322.1| hypothetical protein Sama_1445 [Shewanella amazonensis SB2B]
 gi|119767082|gb|ABL99652.1| hypothetical protein Sama_1445 [Shewanella amazonensis SB2B]
          Length = 386

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 11/144 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEY--LVYLLEVQI-ALAERQYNIAHEKLEMML 147
            ++   + +   A+ ++ Y         E   L  L   +  A      ++A    + + 
Sbjct: 244 AIVHRRSGDWHSAQALYQYA-----LEIEPDNLAVLDNYRALAKLAGNTDLADTLKKRIA 298

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +I   R F  Y L  E+ R G+ N A+ Y +K L  +P        + +   +  ++  A
Sbjct: 299 RIEDYRGFDFYVLGHEALRQGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFDIA 358

Query: 208 ITFLNQKKK---NAKEWNRNRAIL 228
              L +       +++  R +A L
Sbjct: 359 KQALEKALALSSRSEDARRYQAKL 382



 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 55/170 (32%), Gaps = 15/170 (8%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+     + +    G +  +Y  A E +K     +     AA           A+ + + 
Sbjct: 203 AMFYRNLASDALVAGRLEDAYWLAREGVKWAPKYVPLINVAAIVHRRSGDWHSAQALYQY 262

Query: 286 IWKVNP--------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
             ++ P        +  +A       ++      KR  R+E+          ++   AL 
Sbjct: 263 ALEIEPDNLAVLDNYRALAK--LAGNTDLADTLKKRIARIEDYRGFDF---YVLGHEALR 317

Query: 338 MGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSAL 386
            G+ ++A       +K AP     +  LA+++              + AL
Sbjct: 318 QGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFD-IAKQALEKAL 366



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 12/126 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL----AKEWSRAITFLNQKKKNAKE 220
            R GD +SAQ     AL+I PD      AV+  Y      A     A   L ++    ++
Sbjct: 248 RRSGDWHSAQALYQYALEIEPDNL----AVLDNYRALAKLAGNTDLA-DTLKKRIARIED 302

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +      +L   +L    +G+   +     + LK            A+    Q K   A+
Sbjct: 303 YRGFDFYVLGHEAL---RQGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFDIAK 359

Query: 281 VILEKI 286
             LEK 
Sbjct: 360 QALEKA 365



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 20/187 (10%)

Query: 151 ATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            T   A+   +L  ++   G L  A   A + +  +P    +       +  + +W  A 
Sbjct: 198 ETTFVAMFYRNLASDALVAGRLEDAYWLAREGVKWAPKYVPLINVAAIVHRRSGDWHSAQ 257

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA----DKGDMIASYHDAIESLKLCDNSIMASI 264
                  +   +   N A+L   R+L       D  D +      IE  +   +      
Sbjct: 258 ALYQYALEIEPD---NLAVLDNYRALAKLAGNTDLADTLKKRIARIEDYRGF-DF----Y 309

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIANI-YTHLLSENTVGKLKRALRLE 318
                 + Q    +AEV   K+ K  P  HP   E+A +       +     L++AL L 
Sbjct: 310 VLGHEALRQGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFDIAKQALEKALALS 369

Query: 319 EINKESV 325
             ++++ 
Sbjct: 370 SRSEDAR 376


>gi|170717698|ref|YP_001784771.1| hypothetical protein HSM_1451 [Haemophilus somnus 2336]
 gi|168825827|gb|ACA31198.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336]
          Length = 398

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 94/337 (27%), Gaps = 62/337 (18%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151
             +  A ++H  +     +  E    LL  Q     +       Y+ A     +++  P 
Sbjct: 91  GEVDRALRIHQALDSSPNYTFEQ--KLLAKQ--QLAKDFLTIGFYDRAENLYILLIDEPN 146

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             E A+  L     +  +   A   A K   ISP       A+   Y             
Sbjct: 147 YAENALQQLAVIYQKTKEWKKAINVAEKLAKISPT--EDNIALAHYYCE----------- 193

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                                    +D+     + H   ++L +   S+ ASI  A+  I
Sbjct: 194 -------------------YSLTLGSDEQQQAQAIHILKQALNVSKTSVRASILIAERYI 234

Query: 272 SQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKES 324
              + ++A   LE +      +     P +   Y  L       +L      L   ++  
Sbjct: 235 VNLEYQRAVQHLENVLIQNADYMSEILPALKYCYQELN------RLDNFELFLIRASQTG 288

Query: 325 VESLVIVSKIALEMGSID--QAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILY 380
             S V ++   L         A  K    ++  P   I    +  QI+ A +    + L 
Sbjct: 289 NNSAVDLALSDLIAEKDGIVAAQTKLHQQLEQNPSTFILHRFIQYQIDAAENGKAKESLI 348

Query: 381 WTQSAL--HAMPDPLWIS-DDGYLSSVWLPLSPISKT 414
                +         +     GY +       P  + 
Sbjct: 349 LLHKIVGDRIARGFDYRCSHCGYQTHKLSWNCPSCRK 385


>gi|330816720|ref|YP_004360425.1| TPR-repeat pilus assembly protein TadD [Burkholderia gladioli BSR3]
 gi|327369113|gb|AEA60469.1| TPR-repeat pilus assembly protein TadD [Burkholderia gladioli BSR3]
          Length = 281

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 2/123 (1%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
              +LL      A  Q + + +    +L  P         +   +   GD   A +   +
Sbjct: 88  PDTHLLRADALRATSQLDASEQFYTQLLNTP-LAARGYRGIGLIAGTRGDFARAAKMLDQ 146

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNRAILLIARSLENAD 238
           A  ++P        +    +   + + A    +   + + K       + L   +  + D
Sbjct: 147 ATLLAPTDASTLSDLAYARMRTGDLAAARVPLMKAAELDQKNARIISNVALFLVASGHQD 206

Query: 239 KGD 241
              
Sbjct: 207 DAQ 209


>gi|40849912|gb|AAR95668.1| plectin 3 [Mus musculus]
          Length = 4521

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1375 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1434

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1435 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1494

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1495 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1535


>gi|40849928|gb|AAR95676.1| plectin 11 [Mus musculus]
          Length = 4543

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557


>gi|40849920|gb|AAR95672.1| plectin 7 [Mus musculus]
          Length = 4511

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1365 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1424

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1425 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1484

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1485 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1525


>gi|12698117|dbj|BAB21885.1| hypothetical protein [Macaca fascicularis]
          Length = 524

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  V + +W                     A +        ADKG+  A+     E++
Sbjct: 237 MLRCVVRSGQWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 292

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L + +N++ + +
Sbjct: 293 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVRIQ--PDFAAAWMNLGIVQNSLKRFE 350

Query: 313 RALRLEEINKESV 325
            A +   +  +  
Sbjct: 351 AAEQSYRMAIKHR 363


>gi|71278736|ref|YP_267286.1| TPR domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71144476|gb|AAZ24949.1| TPR domain protein [Colwellia psychrerythraea 34H]
          Length = 917

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 6/152 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A+ + SY+S+    H    V LL  ++   +     A + LE++ Q        + +
Sbjct: 760 AEAAQTIESYLSRMIKDHK---VRLLLAELY-MQFDEAKAIKHLEIINQSEQNNAVVLNN 815

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     +      A  YA KA ++      +++      V  K +  AI  L        
Sbjct: 816 LAMLELKRARPEQALLYAEKAFELKSGIHQISDTYGAALVTVKNFDSAIIVLLNAINQGS 875

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           E       + + ++     K D + +  D+I+
Sbjct: 876 EAET--TYVNLTKAYLATGKTDKVKALLDSIK 905


>gi|22298814|ref|NP_682061.1| hypothetical protein tlr1271 [Thermosynechococcus elongatus BP-1]
 gi|22294995|dbj|BAC08823.1| tlr1271 [Thermosynechococcus elongatus BP-1]
          Length = 624

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFA 156
            N+  AR  +  V       N++L  LL+  QI LAE     A    +  L +      A
Sbjct: 226 GNLAAARDRYQEV---LLRDNKHLRTLLQLGQICLAEEDLTGAIGYYQRCLSLDPLNSAA 282

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
              L       GD  +A  Y  +A+ ++P+A  V
Sbjct: 283 QAGLATALLESGDPQAALPYLRQAVALNPEAEDV 316



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 77/276 (27%), Gaps = 28/276 (10%)

Query: 119 EYLVYLLEVQIA---LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           E L   LE + A           A     +           +++L  +        +A  
Sbjct: 52  EQLARPLEARTAYEQAIALDPWHAPSHYRL--------AVVLHALLQQ------PAAAVP 97

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +  +AL++ PD       +   Y+   +   AI    +      +        L    L 
Sbjct: 98  HYQRALEVKPDWVEAHSNLGNAYLDLGDTEGAIACYQKALSLNPDLP----TTLYNLGLC 153

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              +G +  +     +SL L             + +       A V  +     NP    
Sbjct: 154 LHAQGKLTEATACYEQSLYLEPGQADVHNNLGSAYLELKNYTAATVHFQAALGANPELLV 213

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            H  +     HL       + +    L   NK  + +L+ + +I L    +  A      
Sbjct: 214 AHYNLGYA-LHLQGNLAAARDRYQEVLLRDNK-HLRTLLQLGQICLAEEDLTGAIGYYQR 271

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
            + + P               S +    L + + A+
Sbjct: 272 CLSLDPLNSAAQAGLATALLESGDPQAALPYLRQAV 307


>gi|320102538|ref|YP_004178129.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319749820|gb|ADV61580.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 1314

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 9/129 (6%)

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-------AITFLNQKKKN 217
             R G+L +A     +A  + PD   +     +       W         A+  L    + 
Sbjct: 973  RRQGNLPAALDRLQRARMVRPDLAEIPRLTARLR-REPLWRNDPLNRLQALEDLQTAARL 1031

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R RA  L   +    +      +   A E+L+L      A++    +L+  ++  
Sbjct: 1032 ESDPIR-RADDLALAAQLFLEDQKPTQALDSATEALRLDPTHPQAALTRLVALMELDRHG 1090

Query: 278  KAEVILEKI 286
            +   ++E  
Sbjct: 1091 ELIPLIEPA 1099


>gi|311108752|ref|YP_003981605.1| tetratricopeptide repeat family protein 11 [Achromobacter
           xylosoxidans A8]
 gi|310763441|gb|ADP18890.1| tetratricopeptide repeat family protein 11 [Achromobacter
           xylosoxidans A8]
          Length = 607

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 8/245 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +L  +IA     Y  A   +  + +       A  +L F+    G+L  A   A     
Sbjct: 73  RVLASEIAAQRGMYGSAATTMLGLARDTGDPRLARRALEFQ-LAGGNLPGALDAARVWAR 131

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +SP+    +   +       +       L+Q  +N  + +R++   +       +   D 
Sbjct: 132 LSPNDVEASSTELALAAANGQTKG----LSQALRNRIDSSRDKPAAIGQALAVLSRLNDR 187

Query: 243 IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT- 300
             +     ESL      + A+  A A    +     +A          +P  E A +   
Sbjct: 188 RLALRILDESLSDNVRKLPAAHLALADVASASGDYTRAAQESRAALAADPKSEAAALRVL 247

Query: 301 -HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +    +       A      N  + +  ++++    + G  + A A+     + +P   
Sbjct: 248 EYGYRVDPQRAQTEARAYIARNPNARKVRLMLAGQLADSGDYNGALAELQAMSRRSPEDF 307

Query: 360 IFLLL 364
             L +
Sbjct: 308 DLLFM 312



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 120 YLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
              +L    +A A   Y  A  E    +   P +   A+  L  E     D   AQ  A 
Sbjct: 206 PAAHLALADVASASGDYTRAAQESRAALAADPKSEAAALRVL--EYGYRVDPQRAQTEAR 263

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             +  +P+A  V   +  Q   + +++ A+  L    + + E
Sbjct: 264 AYIARNPNARKVRLMLAGQLADSGDYNGALAELQAMSRRSPE 305


>gi|296132604|ref|YP_003639851.1| TPR repeat-containing protein [Thermincola sp. JR]
 gi|296031182|gb|ADG81950.1| TPR repeat-containing protein [Thermincola potens JR]
          Length = 196

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 20/164 (12%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L   ++   +++Y  A    +  L+I      A Y+L        +   ++    K L
Sbjct: 51  TNL--GRVLFEQKKYEDAITCFKAALKINPNDSTAHYNLALVYFAREEWQKSRAELDKIL 108

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              P+       + +  + ++ +  A     +  K              +      D   
Sbjct: 109 KAQPNHTLALLQLGEVNLKSENYEEARQTFKKCWKLEPTS--------ASALKGLGDSYV 160

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +  Y  A  + KL    +              + R+A   LE+
Sbjct: 161 GLKQYEKAKAAYKLALRYVP----------DYGEVREALRRLEE 194



 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
            + L  Q K   A    +   K+NP     H  +A +Y     E    + +   ++ +  
Sbjct: 54  GRVLFEQKKYEDAITCFKAALKINPNDSTAHYNLALVYF-AREEWQKSRAE-LDKILKAQ 111

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
                +L+ + ++ L+  + ++A        K+ P     L
Sbjct: 112 PNHTLALLQLGEVNLKSENYEEARQTFKKCWKLEPTSASAL 152


>gi|301772642|ref|XP_002921741.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like
           [Ailuropoda melanoleuca]
 gi|281353406|gb|EFB28990.1| hypothetical protein PANDA_010649 [Ailuropoda melanoleuca]
          Length = 915

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHK 631

Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
                S +++ +   E+    +A  + +  +   P     +  L  +   +  +++    
Sbjct: 632 LALFNSAILMQESG-EVKLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 689

Query: 381 WTQSALHAMPD 391
           W + A+    D
Sbjct: 690 WMKKAIKLQAD 700


>gi|256418964|ref|NP_958788.2| plectin isoform 1e [Mus musculus]
          Length = 4521

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1375 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1434

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1435 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1494

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1495 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1535


>gi|254675253|ref|NP_958793.2| plectin isoform 1b [Mus musculus]
          Length = 4543

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557


>gi|254675251|ref|NP_958792.2| plectin isoform 1d [Mus musculus]
          Length = 4511

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1365 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1424

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1425 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1484

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1485 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1525


>gi|254675201|ref|NP_958787.2| plectin isoform 1f [Mus musculus]
          Length = 4534

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1388 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1447

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1448 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1507

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1508 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1548


>gi|157812760|gb|ABV81125.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Mesocyclops edax]
          Length = 289

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 72/184 (39%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +          + +    N   +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVAESEECYNTALRLNP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +  ++  ++   P  A+
Sbjct: 66  EQGYIEEATRLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQ--PAFAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ +  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMHDIQGALQCYTRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 8/166 (4%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES 164
            ++   + +  H + L  L    I   +     A     + +   P     A  +L    
Sbjct: 42  CYNTALRLNPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAAHSNLASIL 98

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G LN A  +  +A+ I P        +        +   A+    +  +    +   
Sbjct: 99  QQQGKLNEALMHYKEAIRIQPAFADAYSNMGNTLKEMHDIQGALQCYTRAIQINPAF--- 155

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            A      +  + D G++  +      +LKL  N   A    A  L
Sbjct: 156 -ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPNFPDAYCNLAHCL 200


>gi|168002220|ref|XP_001753812.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695219|gb|EDQ81564.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 565

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 67/216 (31%), Gaps = 24/216 (11%)

Query: 134 RQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             +   +  +  ++ I +TR       AVY          D   A  YA K+L +     
Sbjct: 300 GDHMELNRLVHELINIDSTRPEVWVAAAVYWEM-----RDDKIRALTYADKSLRVDDRHT 354

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                     +       A+    + +    +    + ++    ++          +   
Sbjct: 355 SAYVVKGNISLTLNRPEAAVMAFRKAQLLKADLRSYQGLVRAYLAI-----PKHKEALCA 409

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHP-----EIANIY-TH 301
           A E++K    S  A         +    R KA    E   ++ P        +A++Y   
Sbjct: 410 AREAMKAMPQSAKALTLVGDVYAAHQDGRDKARRFYESALRLEPTYLGSVFALADLYGME 469

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
             +E  +  L+R   L+    +++ + +     A +
Sbjct: 470 GRTEEAILLLQRY--LKTWADDALHTKLAQIFAASD 503


>gi|153006241|ref|YP_001380566.1| hypothetical protein Anae109_3398 [Anaeromyxobacter sp. Fw109-5]
 gi|152029814|gb|ABS27582.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 274

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 16/178 (8%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  E    G L+ A R   KA+++ P +    + +   Y   K +  A++      + 
Sbjct: 18  RGI--ELADRGWLDEAIREFKKAIELDPSSAHAHDNLATVYSEKKLFREALSEYLTAIQL 75

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E       L    +    D    IA Y DAIE   L      A +    +L  Q K  
Sbjct: 76  EPESATAHYNLACFLATHGHDMA--IAEYRDAIE---LDPEYPDAHLNLGLTLADQGKAD 130

Query: 278 KAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           +A   LE   +++P      H E+A +       +    + +   +  +  ++ E+ +
Sbjct: 131 EAVKELETAIRLDPKDPFPRH-ELAALLMD--EGDYRSAITQLKEVVRLEPDNFEAHL 185


>gi|145589353|ref|YP_001155950.1| cellulose synthase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047759|gb|ABP34386.1| cellulose synthase operon C domain protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 1271

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 85/252 (33%), Gaps = 52/252 (20%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWN 222
            G+   A++   +AL+I  D       +VQ  + + +   A+  +N +        K ++
Sbjct: 328 RGNSREAEKQFREALNIEADNGIAIRGLVQLLIDSGKQKEALALINAQAPQNSPEGKRYD 387

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEV 281
             R  +L A++ +   KG    +    ++SLKL                     + K   
Sbjct: 388 YLRVKILSAQADDFIAKGQRDEAIAYLLQSLKLEP-LNPWLRFKLAGEYEDGGLQDKGLS 446

Query: 282 ILEKIWKVNPH-------------------------------PEIANIYTHLLSENTVGK 310
           ++++  ++ P+                               P +AN    L   + + +
Sbjct: 447 LMKEGLRLAPNDSEMINANVLYLLSIDQSEEALLLLKASLAKPALANASLRLTYADVLNR 506

Query: 311 LKRALRL------EEINKESVESLVIVSKI--------ALEMGSIDQAHAKAMLAMKIAP 356
           L+R   L            + E     ++I        AL+ G  + A A    A+++ P
Sbjct: 507 LERDDELKPVLEQLRKAPLTGEEKGKYARIDLDYEIRQALKAGDTNTAIALLNKAVELEP 566

Query: 357 RKEIFLL-LAQI 367
                 L LA++
Sbjct: 567 DDVWLRLDLARL 578



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 37/234 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A + L+  L+       A+  +     R G    A  Y  KAL ++P+       
Sbjct: 215 GDIAAAEQPLQDTLKALPNDYLALGGMGVIRMRQGRYEEAITYYQKALTLNPENS----- 269

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    +W   I+      +             I ++ E  DK +   +      ++
Sbjct: 270 --------GKWKSLISTSQYWMQ-------------IHQAEEARDKKNFPLALEKIRAAI 308

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGKLK 312
            L      A          +   R+AE    +   +     IA      LL ++   K  
Sbjct: 309 ALEPQGAEAIAVLGTIEDDRGNSREAEKQFREALNIEADNGIAIRGLVQLLIDSGKQKEA 368

Query: 313 RALRLEEINKESVES--------LVIVSKIA--LEMGSIDQAHAKAMLAMKIAP 356
            AL   +  + S E          ++ ++    +  G  D+A A  + ++K+ P
Sbjct: 369 LALINAQAPQNSPEGKRYDYLRVKILSAQADDFIAKGQRDEAIAYLLQSLKLEP 422


>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 432

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 6/132 (4%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G  + A +   +A+ I+P                 ++  AI   +Q            A 
Sbjct: 281 GKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINP----QDAF 336

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               + +   D G    +     ++ ++      A      +L +  K  +A    ++  
Sbjct: 337 AWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKACDQAI 396

Query: 288 KVNPHPEIANIY 299
            +N  P+ A  +
Sbjct: 397 SIN--PQFAEAW 406



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 13/195 (6%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G  + A +   +A+ I P                 ++  AI   +Q            A 
Sbjct: 213 GKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDP----QLAE 268

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               + +   D G    +     +++ +      A      +L +  K  +A    ++  
Sbjct: 269 TWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAI 328

Query: 288 KVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            +NP    A       +Y     +  +    +A R   IN +  E+          +G  
Sbjct: 329 SINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANR---INPQFAEAWYNKGVALTALGKY 385

Query: 342 DQAHAKAMLAMKIAP 356
           D+A      A+ I P
Sbjct: 386 DEAIKACDQAISINP 400



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 68/240 (28%), Gaps = 35/240 (14%)

Query: 134 RQYNIAHEKL-EMMLQIPATR--------EFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            +Y+ A     + +   P                  Y E+ +  D          A+ I 
Sbjct: 145 GKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQ---------AISID 195

Query: 185 PDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           P   +       V+       ++  AI   +Q      ++    A      +L     G 
Sbjct: 196 PQNAYAWYNKGTVLGIL---GKYDEAIKPFDQAISIDPQF--AEAWYNKGTALGRL--GK 248

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299
              +     +++ +             +L    K  +A    ++   +N  P+IA  +  
Sbjct: 249 YDEAIKACDQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQAISIN--PQIAEAWYN 306

Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                         +K   +   IN +   +  I      ++G  D+A      A +I P
Sbjct: 307 KGVALTALGKYDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANRINP 366


>gi|297170598|gb|ADI21624.1| FOG: TPR repeat [uncultured myxobacterium HF0130_06F04]
          Length = 680

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 76/230 (33%), Gaps = 15/230 (6%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A +  +    + +   + +   LE+ IA        +  + E       T   A Y
Sbjct: 102 DPQAAAEEPAVSEAEVSMAQQAMSRGLELSIA----DPAASLAQFEQAFSQDPTSASAAY 157

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +      + G ++ AQ Y   AL   PD       +        E ++A   L    K  
Sbjct: 158 NAATLYVQQGTVDKAQDYFRNALTAKPDYAPAAAGLAILLEQQGELAQAEEVLRSTWKKT 217

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           KE          A +   A +G +  ++  AIE+L+  + S  A      +   Q K   
Sbjct: 218 KE----TVEAATALAQLFARQGRLDEAHALAIEALRADERSAHAMAALGMTYRRQGKIEL 273

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
           ++  L +  +++P     H E+  +   L  +    +        +    
Sbjct: 274 SQTALSQAIEIDPNLGLAHNELGLVMVKLGLKAAANRA--FEMAVQAAPH 321



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 5/131 (3%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            D  AS     ++      S  A+  AA   + Q    KA+          P    A   
Sbjct: 133 ADPAASLAQFEQAFSQDPTSASAAYNAATLYVQQGTVDKAQDYFRNALTAKPDYAPAAAG 192

Query: 300 THLLSENTVGKLKRALRLEE---INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +L E      +    L       KE+VE+   ++++    G +D+AHA A+ A++   
Sbjct: 193 LAILLEQQGELAQAEEVLRSTWKKTKETVEAATALAQLFARQGRLDEAHALAIEALRAD- 251

Query: 357 RKEIFLLLAQI 367
            +     +A +
Sbjct: 252 -ERSAHAMAAL 261



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A      +     +G +  +      +L    +   A+   A  L  Q +  +AE +L  
Sbjct: 153 ASAAYNAATLYVQQGTVDKAQDYFRNALTAKPDYAPAAAGLAILLEQQGELAQAEEVLRS 212

Query: 286 IWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL--- 336
            WK     V     +A ++         G+L  A  L      + E S   ++ + +   
Sbjct: 213 TWKKTKETVEAATALAQLFAR------QGRLDEAHALAIEALRADERSAHAMAALGMTYR 266

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
             G I+ +      A++I P
Sbjct: 267 RQGKIELSQTALSQAIEIDP 286


>gi|254675265|ref|NP_958796.2| plectin isoform 1a [Mus musculus]
          Length = 4543

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557


>gi|254675244|ref|NP_958791.2| plectin isoform 1 [Mus musculus]
          Length = 4686

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1540 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1599

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1600 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1659

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1660 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1700


>gi|254675119|ref|NP_001157021.1| plectin isoform 1b2alpha [Mus musculus]
          Length = 4548

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1402 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1461

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1462 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1521

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1522 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1562


>gi|122065897|sp|Q9QXS1|PLEC_MOUSE RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName:
            Full=Plectin-1; AltName: Full=Plectin-6
          Length = 4691

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1545 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1604

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1605 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1664

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1665 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1705


>gi|149277491|ref|ZP_01883632.1| TPR-repeat-containing protein [Pedobacter sp. BAL39]
 gi|149231724|gb|EDM37102.1| TPR-repeat-containing protein [Pedobacter sp. BAL39]
          Length = 562

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 10/132 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G   +A +   +AL ++ D   V + ++     A ++  AI   +           N
Sbjct: 316 LQSGKTEAALKQYQEALKLAEDQYGVWQKLLNVQTNAGKYQEAIQTGDAALAIFP----N 371

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLC---DNSIMASICA--AKSLISQNKKRKA 279
           +AIL    +     +     +  +  ++L L         A + A   +  I + + +KA
Sbjct: 372 QAILYYYYAFALHREDRNAEAKANIKQALSLDGENPEMQ-ALVLALQGEIAIDEQQFQKA 430

Query: 280 EVILEKIWKVNP 291
               ++  ++ P
Sbjct: 431 NQSFDQALQLAP 442



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 45/236 (19%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--- 221
              GD  +A     K  +  P++  V  A+   Y   K    A   L +   NA+     
Sbjct: 210 MEKGDHAAALLLLKKTEEAYPESYEVELALADHYKALKNSDEAAVALRKAFSNAQMPVEQ 269

Query: 222 -----------NRNRAILLIARSLE--------------------NADKGDMIASYHDAI 250
                       RN A L  A ++                         G   A+     
Sbjct: 270 KVKIMMMVAADQRNPAHLSDAMAMGQVLLDTHPEDPKVREWYGDLLLQSGKTEAALKQYQ 329

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------THLLS 304
           E+LKL ++             +  K ++A    +    + P+  I   Y          +
Sbjct: 330 EALKLAEDQYGVWQKLLNVQTNAGKYQEAIQTGDAALAIFPNQAILYYYYAFALHREDRN 389

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVS---KIALEMGSIDQAHAKAMLAMKIAPR 357
                 +K+AL L+  N E     ++++   +IA++     +A+     A+++AP 
Sbjct: 390 AEAKANIKQALSLDGENPE--MQALVLALQGEIAIDEQQFQKANQSFDQALQLAPT 443


>gi|108757611|ref|YP_630685.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108461491|gb|ABF86676.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 312

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 21/207 (10%)

Query: 165 CRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              GDL  A+ +    L+ SP     W  + ++      ++   A     +  +    +N
Sbjct: 1   MAKGDLTRAETFCDLGLEFSPQYADLWSNKGIIAMSSGRQD--DAKKHFIKALR----YN 54

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +               +G    ++ +   +LK+  +++ +    A +L+   K  +++  
Sbjct: 55  QEHLQAYQNLGAIYMQEGAYGKAHDNFRRALKVNPDNLESRYNLALTLMKMGKMDESKKE 114

Query: 283 LEKIWKVNP-----HPEIANI-YTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKI 334
           L  I  VNP     H  +  I Y+    +     L RA +L + +           +   
Sbjct: 115 LRTILAVNPGISDVHHLLGIISYSKGDYDEAGEHLARATQLVQDSPLLWHD-----LGTA 169

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            +E+G   +A        ++ P     
Sbjct: 170 LMELGRYQEARESFANCAQLDPSNSSC 196


>gi|40849918|gb|AAR95671.1| plectin 6 [Mus musculus]
          Length = 4686

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1540 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1599

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1600 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1659

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1660 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1700


>gi|71909339|ref|YP_286926.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71848960|gb|AAZ48456.1| TPR repeat:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB]
          Length = 572

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 68/209 (32%), Gaps = 20/209 (9%)

Query: 126 EVQIALAERQYNIAHEKLEMM---LQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKAL 181
             QI L + +   A E L           T+   A   L  E+ R  D   A      AL
Sbjct: 362 AAQILLQQGKSEEARELLHNTRGGTVAERTQLTLAESQLLREAGRHND---AYIVLDSAL 418

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG- 240
            + PD       ++ +  L  E       L    K       + A  L A     A++  
Sbjct: 419 SVQPDNTE----LLYEAGLTAERIGKPELLETHLKQLLAIKPDHAHALNALGYSWAERNI 474

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN--- 297
            +  ++    ++L L              L  Q K  +A   LE+ +K+   PEIA    
Sbjct: 475 RLPEAHDLIAKALSLAPEDPFIMDSMGWVLYRQGKLTEALQTLEQAYKIKADPEIAAHLG 534

Query: 298 --IYTHLLSENTVGKLKRALRLEEINKES 324
             ++     +     LK A    + N ++
Sbjct: 535 EVLWALDRKDEARSLLKAA---AKANPDN 560


>gi|113475394|ref|YP_721455.1| hypothetical protein Tery_1718 [Trichodesmium erythraeum IMS101]
 gi|110166442|gb|ABG50982.1| Tetratricopeptide TPR_4 [Trichodesmium erythraeum IMS101]
          Length = 799

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 99/282 (35%), Gaps = 49/282 (17%)

Query: 120 YLVYLLEVQIALAERQYNIAH-------EKLE-MMLQIPATREFAVYSLYFESCRIGDLN 171
            L  L   ++  A+ +Y  A        E  +  +L+       ++ +L       G   
Sbjct: 371 SLSNL--AELYRAQGKYEAAEPLLLQAIEIYKIALLENHPNIAVSLSNLAELYRAQGKYE 428

Query: 172 SAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAK 219
           +A+    +A++I         P+       + + Y    ++  A   L Q     K    
Sbjct: 429 AAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALP 488

Query: 220 EWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLC-----DNSIMASICAAKSLI 271
           E + N A+ L   +     +G   A+      AIE  K+       N  ++    A+   
Sbjct: 489 ENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYR 548

Query: 272 SQNKKRKAEVILEKI---WKVN-P--HPEIANI--------YTHLLSENTVGKLKRAL-- 315
           +Q K   AE +L +    +K+  P  HP IA          Y+    E     L +A+  
Sbjct: 549 AQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLTNLYYSQGKYEAAEPLLLQAIEI 608

Query: 316 ---RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               L E +     SL  ++++    G  + A    + A++I
Sbjct: 609 YKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEI 650



 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 87/263 (33%), Gaps = 53/263 (20%)

Query: 120 YLVYLLEVQIALAERQYNIAH-------EKLE-MMLQIPATREFAVYSLYFESCRIGDLN 171
            L  L   ++  A+ +Y  A        E  +  + + P     ++ +L       G   
Sbjct: 329 SLSNL--AELYRAQGKYEAAEPLLLQAIEIYKIALPENPPNIAVSLSNLAELYRAQGKYE 386

Query: 172 SAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAK 219
           +A+    +A++I         P+       + + Y    ++  A   L Q     K    
Sbjct: 387 AAEPLLLQAIEIYKIALLENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALP 446

Query: 220 EWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLC-----DNSIMASICAAKSLI 271
           E + N A+ L   +     +G   A+      AIE  K+       N  ++    A+   
Sbjct: 447 ENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYR 506

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +Q K   AE +L +            IY   L EN              +     SL  +
Sbjct: 507 AQGKYEAAEPLLLQA---------IEIYKIALPEN--------------HPNIAVSLSNL 543

Query: 332 SKIALEMGSIDQAHAKAMLAMKI 354
           +++    G  + A    + A++I
Sbjct: 544 AELYRAQGKYEAAEPLLLQAIEI 566



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 99/307 (32%), Gaps = 56/307 (18%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE--------FAVYSLYFESCRIGDLNSAQRYAT 178
             +  A+ +Y  A        +I  T           ++ +L       G   +A+    
Sbjct: 250 AALYFAQGKYEAAEPLYLQAFKIVKTVLPENHPNIAVSLNNLKNLYYSQGKYEAAEPLLL 309

Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRA 226
           +A++I         P+       + + Y    ++  A   L Q     K    E   N A
Sbjct: 310 QAVEIYKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENPPNIA 369

Query: 227 ILLIARSLENADKGDMIAS---YHDAIESLKLC-----DNSIMASICAAKSLISQNKKRK 278
           + L   +     +G   A+      AIE  K+       N  ++    A+   +Q K   
Sbjct: 370 VSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALLENHPNIAVSLSNLAELYRAQGKYEA 429

Query: 279 AEVILEKI---WKVN-P--HPE-------IANIYTHLLSENTVGKL--KRAL----RLEE 319
           AE +L +    +K+  P  HP        +A +Y           L  +        L E
Sbjct: 430 AEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPE 489

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI--------APRKEIFLL-LAQIEQA 370
            +     SL  ++++    G  + A    + A++I         P   + L  LA++ +A
Sbjct: 490 NHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYRA 549

Query: 371 NSHNTDK 377
                  
Sbjct: 550 QGKYEAA 556


>gi|317153733|ref|YP_004121781.1| tetratricopeptide domain-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943984|gb|ADU63035.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 206

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 10/130 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               D   A+R    A+  SP        +    +   +       L        +  + 
Sbjct: 36  LSRRDFMEAEREFLDAVAHSPRLAEGYVQLGGIAMQRGD-------LESCLSYNLQATQQ 88

Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           R   ++            GD   ++    ++LKL  + + A    +   I+     +A+ 
Sbjct: 89  RPFFSVPWGNIGFVQLQLGDTDKAHKSLKKALKLDPDFVQAQATMSSLHITTGDYEEADK 148

Query: 282 ILEKIWKVNP 291
           +L++I +  P
Sbjct: 149 LLKQILEKYP 158


>gi|254675115|ref|NP_001157012.1| plectin isoform 12alpha [Mus musculus]
          Length = 4691

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1545 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1604

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1605 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1664

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1665 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1705


>gi|148697588|gb|EDL29535.1| plectin 1, isoform CRA_c [Mus musculus]
          Length = 4552

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1406 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1465

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1466 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1525

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1526 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1566


>gi|77461012|ref|YP_350519.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
 gi|77385015|gb|ABA76528.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 248

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           +S         L  L   Q   A    N A   LE   ++       +Y L       GD
Sbjct: 136 LSADEQLDGPVLALLTTAQQQQAGGDLNGASSSLERAQRVAPREPQVLYRLAQVRMAQGD 195

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKK 216
              A++ A +AL ++   P +  ++ +       K+   A   L ++K 
Sbjct: 196 APQAEQTARRALTMANGRPDLQASLWELIAQAREKQGDSAGATLARQKA 244


>gi|332242053|ref|XP_003270198.1| PREDICTED: transmembrane and TPR repeat-containing protein 4
           isoform 1 [Nomascus leucogenys]
          Length = 741

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 8/123 (6%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  V + EW                     A +        ADKG+  A+     E++
Sbjct: 454 MLRCVVRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 509

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR
Sbjct: 510 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 565

Query: 314 ALR 316
              
Sbjct: 566 FEA 568


>gi|322698940|gb|EFY90706.1| kinesin light chain 1 and, putative [Metarhizium acridum CQMa 102]
          Length = 645

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 80/251 (31%), Gaps = 39/251 (15%)

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQ 197
           + Q   +R  + ++L       G +  A     + + I         PD       +   
Sbjct: 359 LAQDHPSRLASQHALAGAYEANGQIQKAVTLLEQVVKIQETTLAQDHPDRLASQHELAGA 418

Query: 198 YVLAKEWSRAITFLNQ---------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           Y    +  +A+T L Q          + +        A+    ++     K   +     
Sbjct: 419 YEANGQIQKAVTLLEQVVKIRETTLAQDHPDRLASQHALAGAYKANGQIQKAVTLLEQVV 478

Query: 249 AIESLKLC---DNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHP------ 293
            I+   L     + + +    A++  +  + +KA  +LE++ +         HP      
Sbjct: 479 KIQETTLAQDHPDRLASQHELARAYRANGQIQKAVTLLEQVVEIEETSLAQDHPSRLASQ 538

Query: 294 -EIANIY-THLLSENTVGKLK-----RALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            E+A  Y  +   +  V  L+     R   L + + + + S   ++      G I +A  
Sbjct: 539 QELARAYRANGQIQKAVTLLEQVVKIRETTLAQDHPDRLASQHALAGAYKANGQIQKAVT 598

Query: 347 KAMLAMKIAPR 357
                +KI   
Sbjct: 599 LLEQVVKIQET 609


>gi|297694359|ref|XP_002824446.1| PREDICTED: transmembrane and TPR repeat-containing protein 4-like
           [Pongo abelii]
          Length = 612

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 8/123 (6%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  V + EW                     A +        ADKG+  A+     E++
Sbjct: 454 MLRCVVRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 509

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR
Sbjct: 510 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 565

Query: 314 ALR 316
              
Sbjct: 566 FEA 568


>gi|282878026|ref|ZP_06286834.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
 gi|281299861|gb|EFA92222.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
          Length = 598

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 86/288 (29%), Gaps = 45/288 (15%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSA 173
           NE L  L ++ +         A + L+ +          R      L       G    A
Sbjct: 191 NEELT-LSKMSVYEMMGDKESARKTLQQLADSHPNDVNYRVMLGNWLMQH----GGQKKA 245

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
            +  T+AL+  PD  +V  ++   +    +  +AI   ++   +     + +  +L    
Sbjct: 246 YKLFTQALEEEPDNGFVLASLYDYHNQVGDKEKAIALRDRILMSKDTEIQTKMTMLQQVI 305

Query: 234 LENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +N D KGD     +     +K+       +  AA + +S  K  +  V+         H
Sbjct: 306 RDNEDHKGDSTEVLNLFKRMMKVHPKDADIASLAA-AYMSLKKMPQDTVM-----AALQH 359

Query: 293 PEIANIYTHLLSENTVGKL------------KRALRL----EEINKESVESLVIVSKIAL 336
                    +  +N+  +L            K+ + L     +   + +     ++   +
Sbjct: 360 ------VIDIAPDNSPARLQLLRMYLPGKNWKKIIALCEEGAQFTPDEMAYYYYMAWAHV 413

Query: 337 EMGSIDQAHAKAMLAMKIAPRKE-------IFLLLAQIEQANSHNTDK 377
           +     +A       +     K         + ++  +          
Sbjct: 414 QQDEQPKAIDALKRGVSTINDKSDTELVSEFYSMMGDLLHQQGDQQGA 461


>gi|229098867|ref|ZP_04229803.1| TPR domain protein [Bacillus cereus Rock3-29]
 gi|229105029|ref|ZP_04235683.1| TPR domain protein [Bacillus cereus Rock3-28]
 gi|229117892|ref|ZP_04247254.1| TPR domain protein [Bacillus cereus Rock1-3]
 gi|228665549|gb|EEL21029.1| TPR domain protein [Bacillus cereus Rock1-3]
 gi|228678406|gb|EEL32629.1| TPR domain protein [Bacillus cereus Rock3-28]
 gi|228684540|gb|EEL38482.1| TPR domain protein [Bacillus cereus Rock3-29]
          Length = 219

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 67/205 (32%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A +   Q  ++        A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKSVFEQAMQSGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L ++ + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDEDDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205


>gi|167816884|ref|ZP_02448564.1| TPR domain protein [Burkholderia pseudomallei 91]
          Length = 614

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 54/180 (30%), Gaps = 4/180 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258


>gi|297274760|ref|XP_001094711.2| PREDICTED: transmembrane and TPR repeat-containing protein 4-like
           [Macaca mulatta]
          Length = 618

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  V + +W                     A +        ADKG+  A+     E++
Sbjct: 331 MLRCVVRSGQWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 386

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L + +N++ + +
Sbjct: 387 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVRIQ--PDFAAAWMNLGIVQNSLKRFE 444

Query: 313 RALRLEEINKESV 325
            A +   +  +  
Sbjct: 445 AAEQSYRMAIKHR 457


>gi|281350389|gb|EFB25973.1| hypothetical protein PANDA_002841 [Ailuropoda melanoleuca]
          Length = 759

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  + + EW                     A +        ADKG+  A+     E++
Sbjct: 472 MLRCMIRSGEWRNEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 527

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L + +N++ + +
Sbjct: 528 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNLGIVQNSLKRFE 585

Query: 313 RALRLEEINKESV 325
            A R      +  
Sbjct: 586 AAERSYRTAIKHR 598


>gi|239787366|emb|CAX83842.1| TPR repeat protein [uncultured bacterium]
          Length = 1036

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 55/136 (40%), Gaps = 13/136 (9%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R+L+    G +  +     +++    + + + + +A  L    K   +  +L K  +
Sbjct: 18  AFERALDLQKSGQLDQAASAYEQAMAERPDHVPSLVNSAVVLRRLGKLEASLRLLYKALE 77

Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRA-LRLEEINKESVESLVIVS---KIAL---EMGS 340
           ++P  P +           T+ +LKR    +    + + +S ++++    +AL   E G 
Sbjct: 78  IDPRQPGMWQ-----NLGETLRRLKRLDEAVGAFKRAAQDSNILLAAVSGLALALKEAGQ 132

Query: 341 IDQAHAKAMLAMKIAP 356
           +D+A +     +   P
Sbjct: 133 LDEALSAMETLLAKEP 148



 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 79/230 (34%), Gaps = 10/230 (4%)

Query: 131 LAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
               Q + A    E  M + P     ++ +      R+G L ++ R   KAL+I P  P 
Sbjct: 26  QKSGQLDQAASAYEQAMAERPD-HVPSLVNSAVVLRRLGKLEASLRLLYKALEIDPRQPG 84

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           + + + +     K    A+    +  +++          +   +L   + G +  +    
Sbjct: 85  MWQNLGETLRRLKRLDEAVGAFKRAAQDS----NILLAAVSGLALALKEAGQLDEALSAM 140

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306
              L     ++ A    +  L    +   A++ LE+  ++ P      +   +       
Sbjct: 141 ETLLAKEPGNVAAWAAFSDVLFDAGQDDAAQLALERAIRLKPTSAGHHLRMAFHQSQQGQ 200

Query: 307 TVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIA 355
                     L     +S+ S+   +++  +  G +++A      AM++ 
Sbjct: 201 YQTAEAIYRALLRQGGDSLASVHTGLAQALISQGRLEEAQPLIARAMELD 250


>gi|197129845|gb|ACH46343.1| putative tetratricopeptide repeat domain 1 variant 2 [Taeniopygia
           guttata]
 gi|197129857|gb|ACH46355.1| putative tetratricopeptide repeat domain 1 variant [Taeniopygia
           guttata]
          Length = 278

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              ++  A     +  +     + ++RA+L   R+     +    A+  D  ++++L  +
Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173

Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285
            I A +  A+      K  +A      +LEK
Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKAVLEK 204


>gi|145601929|ref|XP_359458.2| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15]
 gi|145010394|gb|EDJ95050.1| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15]
          Length = 681

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 24/156 (15%)

Query: 148 QIPATREFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQYVL 200
           Q P      +    LY +    G+ + A ++  KA+ + PD     + +     + +   
Sbjct: 375 QDPE--ALGLRGRSLYAQ----GENDKAIQHFRKAVSLDPDFKDAVKWLRVVQKLDRMKE 428

Query: 201 AKE-------WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                     W  AI   +   +   +     + +L  R+L          +  D  ++L
Sbjct: 429 EGNVEYKAGKWQAAIEKYSAALQVDPDNKGTNSKILQNRALAYNKLKQYDQAIIDCEKAL 488

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            L  +   A    A +L    K   A       WK 
Sbjct: 489 SLDPSYTKARKTKATALGLAEKWEDAVR----EWKS 520


>gi|19113365|ref|NP_596573.1| complexed with Cdc5 protein Cwf4 [Schizosaccharomyces pombe 972h-]
 gi|15213959|sp|P87312|CLF1_SCHPO RecName: Full=Pre-mRNA-splicing factor clf1; AltName: Full=Cell
           cycle control protein cwf4; AltName: Full=Complexed with
           cdc5 protein 4
 gi|7689371|gb|AAF67752.1|AF254353_1 Cwf4p [Schizosaccharomyces pombe]
 gi|2226422|emb|CAB10088.1| complexed with Cdc5 protein Cwf4 [Schizosaccharomyces pombe]
          Length = 674

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 71/248 (28%), Gaps = 48/248 (19%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK------NAKEWNRNRAILLIA 231
            K L  SP        +++    A + +       +             W R   I L  
Sbjct: 309 EKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNY 368

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  D  D+  +     E+LKL            +  A   + Q K   A   L +  
Sbjct: 369 CLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRAL 428

Query: 288 KVNPHPEIANIYTHLLS--------------------------------ENTVGKLKRAL 315
            + P P++   Y                                     E  +G   RA 
Sbjct: 429 GMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRAR 488

Query: 316 RLEEINKESV--ESLVIVSKIALEMG----SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            L  +       E+  +V K  ++         +A +     ++ AP  ++++  A  E 
Sbjct: 489 ALYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKVWISFANFEI 548

Query: 370 ANSHNTDK 377
           A+  + D+
Sbjct: 549 AHLEDDDE 556


>gi|22001546|sp|Q9WX63|BCSC3_ACEXY RecName: Full=Cellulose synthase 1 operon protein C; Flags:
           Precursor
 gi|4827155|dbj|BAA77587.1| bcsCI [Gluconacetobacter xylinus]
          Length = 1325

 Score = 42.6 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 84/299 (28%), Gaps = 75/299 (25%)

Query: 110 VSQQHTFH---NEYLVYLLEVQIALA---ERQYNIAHEKLEMMLQIP--ATREFAVYSLY 161
             ++H  H          L  Q         + + A +  +  LQI            L 
Sbjct: 276 ALKEHMLHPPGGPPDKAGLARQAGFQQLNSGRLSAAEQSFQSALQINSHDADSLGGMGLV 335

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             S R GD   A+RY  +A+   P         +    ++ +++     +   +    + 
Sbjct: 336 --SMRQGDAAEARRYFQEAMAADPKTADRWRPALAGMEISGDYAAVRQLIAAHQYTEAKQ 393

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                  L + + +                          A++  A    +  +      
Sbjct: 394 R------LTSLARQPG--------------------QFTGATLMLADLQRTTGQI----- 422

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
                                  +     L R       +  +  +L+ ++++ +  G+ 
Sbjct: 423 -------------------DASEQEYRSVLAR-------DPNNQLALMGLARVDMAQGNT 456

Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWI 395
            +A             +    E+  L+A    +++ ++ + +   + A+  A  DP W+
Sbjct: 457 AEARQLLSRVGPQYATEVGEIEVTGLMAA--ASHTSDSARKVAILREAMTQAPRDP-WV 512



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 112/352 (31%), Gaps = 57/352 (16%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           TGLM+ A+H    ARK+            +  V +        +     A   ++ +L  
Sbjct: 480 TGLMAAASHTSDSARKVAILREAMTQAPRDPWVRINLANALQQQGDVAEAGRVMQPILAN 539

Query: 150 PAT---REFAV---YSLYFESCRI--------GDLNSA-QRYATKA-------------- 180
           P T   R+  +   Y    ++            D + A +  A +               
Sbjct: 540 PVTAQDRQAGILYTYGAGNDAATRRLLSGLSPEDYSPAIRSIAEEMQIKEDLASRLSMVP 599

Query: 181 -------LDISPDAPWVTE--AVVQQYVLAKEWSRAITFL------------NQKKKNAK 219
                    ++P  P      AV   +    +   A   L            +Q+   A 
Sbjct: 600 NPVPLIREALAPPDPTGARGVAVADLFRQRGDMIHARMALRIASTRTIDLSPDQRLAYAT 659

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASICAAKSLISQNKKR 277
           E+ +    +  AR L     G    + +  +  +   L    +  ++  +  L  +  + 
Sbjct: 660 EYMKISNPVAAARLLAPLGDGSGSGAGNALLPEQQQTLQQLRMGIAVAQSDLLNQRGDQA 719

Query: 278 KAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +A   L    + +P    P++A    +     +   L   L +   N + +++     + 
Sbjct: 720 QAYDHLAPALRADPEATSPKLALARLYNGEGKSSKALDIDLAVLRHNPQDLDARQAAVQA 779

Query: 335 ALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           A+  G    A   AM  ++ +P     +L +A  +QA+ H    I    + A
Sbjct: 780 AVNSGRKSLATHLAMDGVQESPMDARAWLGMAVADQADGHGHRTIAD-LRRA 830


>gi|309379431|emb|CBX21998.1| conserved hypothetical protein [Neisseria lactamica Y92-1009]
          Length = 614

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 100/315 (31%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            P      + +      L  E ++ +  L +    A +    R  LL+A++    D    
Sbjct: 131 EPIPGEAQKRMAWLRSVLKGEENQRLDGLEEILAQADDGQNRRIFLLLAQAAVQQDGLAQ 190

Query: 243 IAS-----------------------------YHDAIESL----KLCDNSIMASICAAKS 269
            AS                                AI +L    KL    +  ++   + 
Sbjct: 191 KASEAVHRAALKYEHLPEAAVADVVFNVQVREKDKAIAALQRLAKLDTEILPPTLVTLRL 250

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEI 320
           +      R+   IL   ++      ++ ++  +           ++   +LK    L + 
Sbjct: 251 VA-----RRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLRRPDDAYERLK---VLLDA 302

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +     ++ A       ++    L A +  A+  +
Sbjct: 303 NPNAD----LYIQAAILATNRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRD 358

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 359 YAKVRQWLKK-VSAP 372


>gi|254675195|ref|NP_035247.2| plectin isoform 1c [Mus musculus]
          Length = 4572

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1426 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1485

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1486 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1545

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1546 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1586


>gi|254675117|ref|NP_001157014.1| plectin isoform 1c2alpha3alpha [Mus musculus]
          Length = 4589

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1443 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1502

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1503 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1562

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1563 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1603


>gi|229843852|ref|ZP_04463993.1| hypothetical protein CGSHi6P18H1_05421 [Haemophilus influenzae
           6P18H1]
 gi|229812846|gb|EEP48534.1| hypothetical protein CGSHi6P18H1_05421 [Haemophilus influenzae
           6P18H1]
          Length = 487

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNS 172
           H+  LV   E +IA      ++A  K   +L       ATR  A+  L FE  +      
Sbjct: 100 HHNALVLFAEGKIANLSGDKSLAMRKYREILSANPNDNATR-LALAQLLFEQKQDNASKE 158

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
             +    A D+ P A  + +A ++       W 
Sbjct: 159 QFQKVLTAKDLPPQAREIVQAYLKALDERNSWD 191


>gi|254283922|ref|ZP_04958890.1| sulfotransferase [gamma proteobacterium NOR51-B]
 gi|219680125|gb|EED36474.1| sulfotransferase [gamma proteobacterium NOR51-B]
          Length = 663

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 75/245 (30%), Gaps = 29/245 (11%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             +  L    +  A    E+ LQ     P         L  +      L  A       L
Sbjct: 18  SAETYLRNGDWRNAQAVCEVGLQTFSGDPGLTWLLGRCLIGQKK----LQRADALTRDLL 73

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + PD     E       +  ++  A    N+  ++    +   A   +++     D+  
Sbjct: 74  SMHPDLYRAQELRGDLETVTGDFESARASYNRA-RDLLPADATAAAEQLSKKQAYLDQQQ 132

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +   A+      D+   A    A+         +AE IL ++ + N  P+ A     
Sbjct: 133 --EATGGALMPEGDSDDLAEAERLKAR-----GAGGEAEAILRRLVRRN--PDNAEALRQ 183

Query: 302 LLS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           L +         +    L RA    E +       + +++  L++G  + A   +   + 
Sbjct: 184 LATMASEHFQYADAAALLTRA---VEASPRFARGWLDLARAYLDLGDYNAALESSERVVA 240

Query: 354 IAPRK 358
           + P  
Sbjct: 241 LYPEA 245



 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 4/168 (2%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L E +   A      A   L  +++       A+  L   +        A    T+A++ 
Sbjct: 148 LAEAERLKARGAGGEAEAILRRLVRRNPDNAEALRQLATMASEHFQYADAAALLTRAVEA 207

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           SP        + + Y+   +++ A+    +      E      +L  ++S  N  +    
Sbjct: 208 SPRFARGWLDLARAYLDLGDYNAALESSERVVALYPEAADAHVVLANSQSQANLHE---- 263

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            + +    +L +  +   A    A  L +  ++ +A     +    NP
Sbjct: 264 EAINSYSNALDIAPHHDGAFSGLAHQLKTLGRQDEAIATHRRAIAANP 311


>gi|254169311|ref|ZP_04876142.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei
           T469]
 gi|197621732|gb|EDY34316.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei
           T469]
          Length = 465

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  SA     K   +S       E ++       ++  AI  L + K  + + N  RA L
Sbjct: 53  DRVSALSPKEK-KTLSRILTEAGEKMLVLK----DYEYAIKTLEKAK--SLDRNNVRAWL 105

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            I R+L       +  +     E++KL  N++ A+I    +L  + + + A     +  +
Sbjct: 106 DIGRNL-LERNVQIPYAVASLKEAVKLAPNNVEANILLGDALRMEGELKSALEAYFRALE 164

Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           V+P + ++ N    +  +N V  LK+   L +      E
Sbjct: 165 VDPENEDVINKILKIEPDN-VEVLKKYAELLKKKGNYNE 202


>gi|167535854|ref|XP_001749600.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771992|gb|EDQ85651.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1012

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 84/236 (35%), Gaps = 16/236 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
           A    + + A      +L++     T   A   L         L   ++   +A  +  +
Sbjct: 231 AQL-GRLDQATAAFARVLELEPHNVTALVATAVLEMNKAEDSSLAEGKKLLKEAYSLDNN 289

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P +   +   + +   + + ++ L++  +N +     RA  +   +     + +   ++
Sbjct: 290 NPNILNHLANLFFIKGAYDKVLS-LSRHAQNCRPTAAQRAETMFHMARVYHIQENYDEAF 348

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301
               +++      ++     A+  I + K  KA   +E ++K  P        +A++Y  
Sbjct: 349 KHYYKAVHEDPAFVLPHFGVAQLYIEKRKYDKAIEHMEIVYKHQPGNYESMKVLASLYA- 407

Query: 302 LLSENTVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              ++   + K      ++  +    +E+ + ++ +  E     QA      A+K 
Sbjct: 408 -QQDSRTQRNKAKSLFQQITTLRPFDIEAWIELAMLH-EAEEPAQAVELYERAIKD 461


>gi|148697586|gb|EDL29533.1| plectin 1, isoform CRA_a [Mus musculus]
          Length = 4572

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1426 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1485

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1486 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1545

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1546 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1586


>gi|40849908|gb|AAR95666.1| plectin 1 [Mus musculus]
          Length = 4572

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1426 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1485

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1486 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1545

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1546 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1586


>gi|40849914|gb|AAR95669.1| plectin 4 [Mus musculus]
 gi|40849916|gb|AAR95670.1| plectin 5 [Mus musculus]
 gi|40849924|gb|AAR95674.1| plectin 9 [Mus musculus]
          Length = 4449

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1303 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1362

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1363 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1422

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1423 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1463


>gi|254195664|ref|ZP_04902091.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
 gi|169652410|gb|EDS85103.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
          Length = 614

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|107023732|ref|YP_622059.1| hypothetical protein Bcen_2185 [Burkholderia cenocepacia AU 1054]
 gi|116690819|ref|YP_836442.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424]
 gi|105893921|gb|ABF77086.1| Tetratricopeptide TPR_2 [Burkholderia cenocepacia AU 1054]
 gi|116648908|gb|ABK09549.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia
           HI2424]
          Length = 607

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 85/223 (38%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A  + D    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 169 ARELARASGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D  D   +     ++L+L  + + A++     L       +A  I      V  +
Sbjct: 224 QQLAVDDKD--GAAQSLKQALQLRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D+A   
Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDEATGY 337

Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++      + ++ LAQI    +++  +   W   
Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 10/154 (6%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +   A      +L      D +++ +   +      +S  AS   A  L+   K 
Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161

Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             A+ +L +           P   +A     +   + VG L     + + +    E+ + 
Sbjct: 162 ADAQPMLARELARASGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLA 220

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +++  L +   D A      A+++ P      L+
Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQLRPDYLPAALM 254


>gi|295132916|ref|YP_003583592.1| TPR repeat protein [Zunongwangia profunda SM-A87]
 gi|294980931|gb|ADF51396.1| TPR repeat protein [Zunongwangia profunda SM-A87]
          Length = 686

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 35/208 (16%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A E    ++Q       A+         + + ++A  Y  +AL+ SP  P    +    
Sbjct: 104 KAKEYYSDLVQRYPENFAALLGFANTLSNLKEYDNALLYVNRALETSPGNPNAMVSKKYI 163

Query: 198 YV-------LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            +         +E+  AI+ LN+     ++++ +R  LL  ++       +   + +  +
Sbjct: 164 RLGFAYQKMQNQEYEPAISLLNKNL---EDFSGDRETLL-NKANIYLITKETEEAKNVYL 219

Query: 251 ESLKLCDNSIMA-SICAAKSLISQNKK---RKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
           E  K   +SI+A +  A  + I++N+K     A   +EK                +L ++
Sbjct: 220 ELAKNAKDSIVALNGMALAAHIAENEKEAQSLAGKAIEKA--------------EVLGDS 265

Query: 307 T---VGKLKRALRLEEINKE--SVESLV 329
           T     + + A  L   NK+  + E+ +
Sbjct: 266 TSLQASRERYAQTLV-WNKDFKNAEAYI 292


>gi|291234754|ref|XP_002737312.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 1482

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 30/159 (18%)

Query: 142 KLEMMLQIPATREF------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
             E M +    R         + +L  +  R     + Q  A KA +         +  +
Sbjct: 792 TYEKMTESQVKRALVQDDPKKLRALERQFKREDKRRATQELARKAAESK------MQRKL 845

Query: 196 QQYVLAKEWSRAITFLNQKK-------KNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           +Q  + K    A+    ++K       + AKE  RNRA+L         D    +     
Sbjct: 846 EQQEMTKR---ALETKRRRKLDSLRNIQEAKEARRNRALLAAEERRRQKDHLKFLKHQEK 902

Query: 249 A--IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              +E ++L           A+ ++ Q +K+K    L+K
Sbjct: 903 LQRLEQMRLEKE------MRAQQILEQRRKKKEAQALKK 935


>gi|224067375|ref|XP_002194200.1| PREDICTED: tetratricopeptide repeat domain 1 [Taeniopygia guttata]
          Length = 278

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              ++  A     +  +     + ++RA+L   R+     +    A+  D  ++++L  +
Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173

Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285
            I A +  A+      K  +A      +LEK
Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKAVLEK 204


>gi|168830306|gb|ACA34403.1| hypothetical protein [uncultured bacterium pTW2]
          Length = 557

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 99/309 (32%), Gaps = 26/309 (8%)

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
           L  P     +L +   D    +L   L++ A      A        Q+ +   +    LL
Sbjct: 253 LGDPVAAAAVLARGPQDDQSYSLRASLLAKA--EDKAALGKLYEALQRDSAKPDPQRRLL 310

Query: 126 EVQIALAERQYNIAHEKLEMMLQIP-----ATREFAVYSLYFESCRIGDLNSAQRYATKA 180
             Q A    +Y  A +    +           R   V          GD   A     +A
Sbjct: 311 LGQTAEFLERYPDALQWYRSVPGGDQRWQARLRAAGV----LHKLERGDEAYADLRQLQA 366

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              + +       + +  +  ++ + A                + A LL AR+L    + 
Sbjct: 367 DAAADEDARRNAYLFEAELRQQDGNGAGEL--DAYARGLAAFPDDAALLYARALGWERRD 424

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK--AEVILEKIWKVNP-HPEI-- 295
           D+  +  D    L    +++ A++ A    ++    R   A  ++++     P +P I  
Sbjct: 425 DIARAEADFRRILVAEPDNV-AALNALGYTLADRTTRYTEALQLIDRARVAEPDNPAIID 483

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L++      E    + ++    G  D+A        
Sbjct: 484 SYGWVLYRLGRNDEALVELRRAFALQK----DPEIAAHLGEVLWVKGDKDEARRFFEQGR 539

Query: 353 KIAPRKEIF 361
           K+ P     
Sbjct: 540 KLDPDNRAL 548


>gi|148697587|gb|EDL29534.1| plectin 1, isoform CRA_b [Mus musculus]
          Length = 4584

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1438 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1497

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1498 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1557

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1558 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1598


>gi|71734225|ref|YP_273266.1| TPR domain-containing protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554778|gb|AAZ33989.1| TPR domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 604

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 122 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 178

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 179 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 237

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 238 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 294

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 295 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 344


>gi|283850585|ref|ZP_06367873.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283574156|gb|EFC22128.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 1155

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 62/201 (30%), Gaps = 7/201 (3%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   G+  +A  +  +A    P +        Q  +       A    +     A +   
Sbjct: 280 ALMAGEPGTAGTWLAEASARDPGSVAAASLTAQMALFENRREEARAQADALLARAPDS-- 337

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+  +   L      D+  +      +L L    + A++  A+  +  ++   A   +
Sbjct: 338 --ALAQVTAGLAAMAAFDLPRAKAAFARALVLDPGFVAAAVYLARIELGSDELEAAWATI 395

Query: 284 EKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            K     P   +      +  L   +  G      +   ++    ++ + +  +A   G 
Sbjct: 396 SKALAAAPGEAVVQATAGFVRLGFRDFKGAEAFFNKAAALDPGLGDARLGLGYVAYSRGQ 455

Query: 341 IDQAHAKAMLAMKIAPRKEIF 361
                 + + A  ++PR  + 
Sbjct: 456 KALGLEQMLGATLLSPRLSLL 476


>gi|260887572|ref|ZP_05898835.1| putative lipoprotein [Selenomonas sputigena ATCC 35185]
 gi|260862747|gb|EEX77247.1| putative lipoprotein [Selenomonas sputigena ATCC 35185]
          Length = 443

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
              K   +  A   + R++  A +G+   +  D   +L+L   S  A    A    +   
Sbjct: 282 AEKKLAEKKNAAAYVYRAIVFAKRGESERAAADLEAALRLSPKSAAALYDRALFFTAAGD 341

Query: 276 KRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330
           +++A+  LE + K    P+    +      +L +      ++   R+  +  +S  +   
Sbjct: 342 EKRAKADLEALIKAQ--PDFVYAWYNLGVMNLKAGRNNAAMRDFERVLALVPQSANAQSN 399

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +    +      +A      A +I   
Sbjct: 400 IGIALVREKKYREAWRAFAQAAEINTT 426


>gi|254883031|ref|ZP_05255741.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|254835824|gb|EET16133.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
          Length = 284

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              LNQK    +++ +++NR           L AR+    +      +  D  E+ KL  
Sbjct: 178 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 237

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295
           +     +   +  +SQ KKR+A V  EK  ++  P PE+
Sbjct: 238 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 276


>gi|224144666|ref|XP_002325368.1| predicted protein [Populus trichocarpa]
 gi|222862243|gb|EEE99749.1| predicted protein [Populus trichocarpa]
          Length = 873

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 76/211 (36%), Gaps = 22/211 (10%)

Query: 144 EMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           E +   P  R    Y     +    GD++ A RY   ++++ P+       +   Y+   
Sbjct: 8   EALRLQP--RFAECYGNMANAWKEKGDIDRAIRYYLVSIELRPNFADAWSNLASAYMRKG 65

Query: 203 EWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             + A     Q         + + N   L+ A+ L       +  +Y   +E+L++  + 
Sbjct: 66  RLNEASQCCRQALALNPLLVDAHSNLGNLMKAQGL-------VQEAYSCYLEALRIQPSF 118

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHL-LSENTVGKLKR 313
            +A    A   +      +A    ++  K+ P  P+    + N+Y  L + +  +   +R
Sbjct: 119 AIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIMCYQR 178

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           A    +       +   ++    E G ++ A
Sbjct: 179 A---VQTRPNYAMAFGNLASTCYERGQVELA 206


>gi|194373325|emb|CAM32586.2| N-acetylglucosaminyl transferase protein [Herbaspirillum
           seropedicae]
          Length = 391

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 10/164 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L  P         A+Y L  +  + G L+ A+    + +D    A  
Sbjct: 84  GETERAIRVHQNLLARPDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQYSAQ- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248
              A+++ Y   KEW RAI+     +        R  A      + +   + +  A+   
Sbjct: 143 AGRALLEIYQREKEWERAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTEAAMAL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
             ++L     S+ A++    +L ++     A     + W+   H
Sbjct: 203 LEKALAADRKSVRATMLMGDALRARGDIEGAL----ETWRRVEH 242


>gi|158337072|ref|YP_001518247.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 594

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 72/242 (29%), Gaps = 34/242 (14%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL   AA N P A +  + V Q+   + E   YL   +   A   +  A +    ++
Sbjct: 300 LNRGLAFAAAKNYPAALQDFNQVLQRDAKNPEA--YLNRGRAHAASGNHLAAIQDYGQVI 357

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +       A ++      ++GD  +A    +KAL + P             +       A
Sbjct: 358 KFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQGNSQDA 417

Query: 208 ITFLNQKKK------------------------------NAKEWNRNRAILLIARSLENA 237
           I       +                               A  +N    +    R + ++
Sbjct: 418 IADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHS 477

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
             G   A+  D  + LKL      A         +Q  +  A     +  + N  PE A 
Sbjct: 478 TAGQNEAAIADYSQVLKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEAN--PENAT 535

Query: 298 IY 299
            Y
Sbjct: 536 AY 537


>gi|126332161|ref|XP_001367572.1| PREDICTED: similar to KIAA0155 [Monodelphis domestica]
          Length = 1168

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 102/305 (33%), Gaps = 41/305 (13%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +  + +L+           L   +   G+   A  +  +AL I+ D P     +   ++ 
Sbjct: 518 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 577

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHDA 249
            +EW        +  K     N   ++L +            R  E  +K     +    
Sbjct: 578 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIY 636

Query: 250 IESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIY 299
            + L+    N   A    ++ A K    + +      R+A   +  +W       +A+IY
Sbjct: 637 KQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIY 691

Query: 300 THLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                  +  ++      +  +   ++ E ++ +++   + G + +     + A  +AP 
Sbjct: 692 VEQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAPS 749

Query: 358 KEIFL 362
             + +
Sbjct: 750 DTVLM 754


>gi|48475086|gb|AAT44155.1| 'hypothetical protein, contains pentrtricopeptide (PPR) repeat'
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 15/105 (14%)

Query: 190 VTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARSLENAD-KG 240
             +AV+          A+EW  AI    + +        +   R +    R+    + + 
Sbjct: 118 AKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRA 177

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               +   A+++  L    +      A           A  +L+ 
Sbjct: 178 VHAYALKLALDAHPLVPGFL------AGMYAENADVAAATRVLDA 216


>gi|66564764|ref|XP_396165.2| PREDICTED: anaphase-promoting complex subunit 7 [Apis mellifera]
          Length = 571

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 57/215 (26%), Gaps = 31/215 (14%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
              I +A     Y S++    N      L  Q          A                 
Sbjct: 299 TGEIYVAMAYSLYASRKLGRANT-----LTAQALNLNPNDIEATI--------------- 338

Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +   +  E  +      A  +   A+ + P      + +V   V       A+   +   
Sbjct: 339 LRGNILIEQKK---YQGALFFFRHAVQLKPYRYEPHKGLVDCLVGMHRLREALNIASGSC 395

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K      R   +       +    G        A+   ++    + A    A+    +  
Sbjct: 396 KQLGHTARVLTLYASVLMKDPVSVGKAKNLLEKALLQDEI---YLPAVYLLAEIYEQEMN 452

Query: 276 KRKAEVILEKIWKVNP----HPEIANIYTHLLSEN 306
              A  +LE+  ++      H  + +++  + +E 
Sbjct: 453 LEAAIALLERQVEIQTACKLHQMLGDLWARVHNEE 487


>gi|116623654|ref|YP_825810.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226816|gb|ABJ85525.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 748

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 4/121 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD  +A     +A+ + P    V                A   ++   K   +    R
Sbjct: 611 ARGDFAAAVLPFARAVQLKPGDGEVRINYAVALGSLGRLEEAGQQIDAAIKADPKSAGAR 670

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +    +      +G    +    +E L+L  +  +A + AA+   S+  +  A   L +
Sbjct: 671 NL----KGRLLERQGRPDEALKQFLEVLRLHPDFALAHLDAARIFASKGDRAAAIQHLRQ 726

Query: 286 I 286
            
Sbjct: 727 A 727



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 75/274 (27%), Gaps = 17/274 (6%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH----EKLEMMLQIPATREFAVY 158
           A  + ++        +  +V +          Q   A       +    + P  R    Y
Sbjct: 480 ANAIAAFEEAARRSPDSPVVAVNLADALTEGGQPERAIAVLNRAIRATQEDPLLR----Y 535

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L       G    A     + + + PD       +      A     A   L       
Sbjct: 536 QLGITQTAAGRSAEAIAAFRQTIALDPDLAEAHNLLGAALAGAGNLDEAQRELTAALAIH 595

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +     A  L       A +GD  A+      +++L        I  A +L S  +  +
Sbjct: 596 PD----NADALGNLGHLLAARGDFAAAVLPFARAVQLKPGDGEVRINYAVALGSLGRLEE 651

Query: 279 AEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A   ++   K +P    A                 LK+ L +  ++ +   + +  ++I 
Sbjct: 652 AGQQIDAAIKADPKSAGARNLKGRLLERQGRPDEALKQFLEVLRLHPDFALAHLDAARIF 711

Query: 336 LEMGSIDQAHAKA-MLAMKIAPRKEIFLLLAQIE 368
              G    A       A    P       +A +E
Sbjct: 712 ASKGDRAAAIQHLRQAAASSEPNIRR-QAVAALE 744



 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 79/259 (30%), Gaps = 46/259 (17%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     +A   SPD+P V   +        +  RAI  LN+  +  +E      +L    
Sbjct: 482 AIAAFEEAARRSPDSPVVAVNLADALTEGGQPERAIAVLNRAIRATQE----DPLLRYQL 537

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +     G    +     +++ L  +   A      +L       +A+  L     +  H
Sbjct: 538 GITQTAAGRSAEAIAAFRQTIALDPDLAEAHNLLGAALAGAGNLDEAQRELTAALAI--H 595

Query: 293 PEIANIY-----------------------THLLSENTVGKLKRALRLEEIN-------- 321
           P+ A+                           L   +   ++  A+ L  +         
Sbjct: 596 PDNADALGNLGHLLAARGDFAAAVLPFARAVQLKPGDGEVRINYAVALGSLGRLEEAGQQ 655

Query: 322 --------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
                    +S  +  +  ++    G  D+A  + +  +++ P   +  L A    A+  
Sbjct: 656 IDAAIKADPKSAGARNLKGRLLERQGRPDEALKQFLEVLRLHPDFALAHLDAARIFASKG 715

Query: 374 NTDKILYWTQSALHAMPDP 392
           +    +   + A  A  +P
Sbjct: 716 DRAAAIQHLRQAA-ASSEP 733



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 96/318 (30%), Gaps = 48/318 (15%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIAL----AERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           H+ ++            L   QIA        QY            +P T E A+Y    
Sbjct: 380 HAVMTDHLIQRRPPAAPL--AQIAERQEFDSNQYRGEVAAYYP-APLPKTAENALYLAVA 436

Query: 163 ESCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +  +  DL     R A +     P        + Q ++ A++++ AI    +  + + + 
Sbjct: 437 QVSQKSDLAKGLPRLAAEVARQKPAPAEFYVELGQAWMSARKFANAIAAFEEAARRSPDS 496

Query: 222 ---------------NRNRAILLIARSLENADK---------------GDMIASYHDAIE 251
                             RAI ++ R++    +               G    +     +
Sbjct: 497 PVVAVNLADALTEGGQPERAIAVLNRAIRATQEDPLLRYQLGITQTAAGRSAEAIAAFRQ 556

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI------YTHLLSE 305
           ++ L  +   A      +L       +A+  L     +  HP+ A+             +
Sbjct: 557 TIALDPDLAEAHNLLGAALAGAGNLDEAQRELTAALAI--HPDNADALGNLGHLLAARGD 614

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LL 364
                L    R  ++     E  +  +     +G +++A  +   A+K  P+      L 
Sbjct: 615 FAAAVLP-FARAVQLKPGDGEVRINYAVALGSLGRLEEAGQQIDAAIKADPKSAGARNLK 673

Query: 365 AQIEQANSHNTDKILYWT 382
            ++ +      + +  + 
Sbjct: 674 GRLLERQGRPDEALKQFL 691



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 54/196 (27%), Gaps = 24/196 (12%)

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGD-------MIASYHDAIESL------KLCDNS 259
           + ++ A  +NR  A    + +  N                  D I ++      +    +
Sbjct: 335 RGEQAALHYNRVCAQCHASVAAANHPASADCVGCHMPRRRTQDVIHAVMTDHLIQRRPPA 394

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLK 312
              +  A +     N+ R         +   P P+       +A       S+   G  +
Sbjct: 395 APLAQIAERQEFDSNQYRGEV----AAYYPAPLPKTAENALYLAVAQVSQKSDLAKGLPR 450

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
            A  +        E  V + +  +       A A    A + +P   +  +         
Sbjct: 451 LAAEVARQKPAPAEFYVELGQAWMSARKFANAIAAFEEAARRSPDSPVVAVNLADALTEG 510

Query: 373 HNTDKILYWTQSALHA 388
              ++ +     A+ A
Sbjct: 511 GQPERAIAVLNRAIRA 526


>gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
 gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
          Length = 534

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 67/190 (35%), Gaps = 21/190 (11%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G    A     KA+ + P+ P             + + +AI   ++  K   + N   A
Sbjct: 16  EGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIK--LDPNNPAA 73

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               A SL   ++     +     +++KL  N+  A    A SL    +  KA    +K 
Sbjct: 74  WYYKADSLYKLER--YEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKA 131

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            K++P+   A  Y  ++             L ++ K   ES     + AL+     +A  
Sbjct: 132 IKLDPNNPAAWYYKGII-------------LAKLGKHEEESK--KYEKALD--KYKEAIE 174

Query: 347 KAMLAMKIAP 356
                ++I P
Sbjct: 175 CFKKVLEIDP 184


>gi|167837462|ref|ZP_02464345.1| TPR domain protein [Burkholderia thailandensis MSMB43]
          Length = 331

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 69/234 (29%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  E  L +         +
Sbjct: 83  GRLDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   A+           
Sbjct: 143 LGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGDTDEAVAHFRAALAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    +      +L L     +A    A +L +  + R A
Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAQALRAFESALALQPRFPLALFGLANALAALGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  +  L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 312



 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 63/216 (29%), Gaps = 9/216 (4%)

Query: 92  LMSIAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           L      N   A++ H                +  ++        A  +++ A       
Sbjct: 104 LAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNNLGNALNALGRHDGALAAFRRA 163

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L++      A  +L      +GD + A  +   AL   P        +          ++
Sbjct: 164 LELRPGHAGAHNNLGMALAALGDTDEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQ 223

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+            +     + L   +   A  G    +      ++ L  + ++A +  
Sbjct: 224 ALRAFESALALQPRFP----LALFGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNL 279

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +  +      A    ++  +++P   +A ++  +
Sbjct: 280 GTAHHALGAHEMALRAFDQALRLDPSHALAQMHRAV 315



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 57/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L+ A+     AL  +P                     A   + +      E   
Sbjct: 11  AHRAGRLDDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 66

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A L +         G +  +      +L L     +A      +  +Q +   A    
Sbjct: 67  NDAALQLNLGNAFKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 126

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           E+   + P     H  + N    L   +    L    R  E+      +   +      +
Sbjct: 127 ERALALTPGDASIHNNLGNALNALGRHDGA--LAAFRRALELRPGHAGAHNNLGMALAAL 184

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D+A A    A+   PR
Sbjct: 185 GDTDEAVAHFRAALAAEPR 203


>gi|159462574|ref|XP_001689517.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
 gi|158283505|gb|EDP09255.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
          Length = 929

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 18/147 (12%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAK-------EWSRAI 208
                 +   GD   A     KA+D++P    P   ++  + YV          ++ RA 
Sbjct: 241 RGQARSAL--GDHEGALADLQKAIDLAPLFGGPDSAQSRAECYVEKGMIYQKMRDYRRAC 298

Query: 209 TFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
             L Q  K +         + L + S  +   G  + +Y  A+E   L        +   
Sbjct: 299 RELQQAVKLDGSNAQAWNVLGLCSTSQGDIRDG--VRAYEKAVE---LNPKLKEGWVNMG 353

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE 294
           ++L  + + ++AE +L K   ++P P+
Sbjct: 354 QALKEEGRTKEAERVLLKALALDP-PD 379


>gi|169625073|ref|XP_001805941.1| hypothetical protein SNOG_15803 [Phaeosphaeria nodorum SN15]
 gi|111055778|gb|EAT76898.1| hypothetical protein SNOG_15803 [Phaeosphaeria nodorum SN15]
          Length = 1139

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 75/221 (33%), Gaps = 32/221 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQK 214
            ++FE     D   A++   KA ++SP      E + + +    EW      +   ++  
Sbjct: 300 GIFFEDYN-KDRKRARQCFQKAFELSPSEIVAAERLARLFANQGEWDIVEVVSQRVVDSG 358

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMASICAAKSLIS 272
           K      ++ + +     +L                 + +L++  +   + +   +S  +
Sbjct: 359 KARQVPGSKRKGVSWPYSALGVVQMNKQEYQKSVVSFLSALRISPDDYYSYVGLGESYHN 418

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             +   A    +  +  NP    A+      SE+                ES  +  +++
Sbjct: 419 SGRYNSASRAFK--YAENP----ADNVLKKRSED----------------ESWFTKYMLA 456

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370
            +  E+   D+A +     +   P++    I LL   +E+ 
Sbjct: 457 NVNRELSEFDEALSGYEAVLATRPKEFGVSIALLQTLVEKG 497


>gi|78189724|ref|YP_380062.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78171923|gb|ABB29019.1| TPR repeat [Chlorobium chlorochromatii CaD3]
          Length = 492

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 59/158 (37%), Gaps = 9/158 (5%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  Q      +Y  A E+   +L   +      ++L       G+  +A++++ +++ +
Sbjct: 40  LLMAQ-----GEYQQALERYRALLTTESNNAALHHALAKAYTANGEFVAARQHSQQSVTL 94

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                W    ++       ++++A+  L++K    +  NR     L   + E+       
Sbjct: 95  EGTNVWYLRLLIALTHNESDYAQAVA-LSKKLVTLEPDNRE---ALTMLAYEHLAARQPN 150

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            +       L+L   +    + +A+  +   ++  A  
Sbjct: 151 EALEVFQRLLQLDPANAEVLLSSAEVALELGRRSDALR 188


>gi|116191789|ref|XP_001221707.1| hypothetical protein CHGG_05612 [Chaetomium globosum CBS 148.51]
 gi|88181525|gb|EAQ88993.1| hypothetical protein CHGG_05612 [Chaetomium globosum CBS 148.51]
          Length = 710

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 27/186 (14%)

Query: 123 YLLEVQIALAERQYNI-------AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
            L+  +  L     N        A   L M  Q P        +LY +    G+ + A +
Sbjct: 355 QLMRGEALLKMGDANSLGEAQNIAMSLLRMNSQDPEALVLRGRALYSQ----GENDKAVQ 410

Query: 176 YATKALDISPDAPWVTEAV-----VQQ-------YVLAKEWSRAITFLNQKKKNAKEWNR 223
           +  KAL   PD     + +     +++          A  W  A+               
Sbjct: 411 HFRKALSCDPDFRDAIKWLRTVQKLERMKEDGNTQYKAGRWQAALDLYTSALDVDPANKG 470

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             + +L  R+L          +  D  +++ L    + A    A +L    K   A    
Sbjct: 471 TNSKILQNRALCRIKLKQYDDAITDCEKAVSLDPQYMKARKTKANALGLAEKWEAAVR-- 528

Query: 284 EKIWKV 289
              WK 
Sbjct: 529 --EWKS 532


>gi|332528608|ref|ZP_08404590.1| hypothetical protein HGR_01849 [Hylemonella gracilis ATCC 19624]
 gi|332041924|gb|EGI78268.1| hypothetical protein HGR_01849 [Hylemonella gracilis ATCC 19624]
          Length = 648

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 68/227 (29%), Gaps = 28/227 (12%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R    +SA + A       P++      V+Q  +        +  L +         R
Sbjct: 99  ALRARAGDSALQAARDWTKAQPESAEANRYVLQILLGLNRLDDTVGPLQRALALTAPAER 158

Query: 224 NRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC------AAKSLISQNKK 276
              I  L      ++DK    +    A+++  L    + A +        A +  +  + 
Sbjct: 159 PLLIATLPLYFSRSSDKAMAASVLEQALQAQLLDPARLPAQVMPIDKTTGAAAWSAVGRM 218

Query: 277 RKAEV----ILEKIWK------VNPHPEIANIYT---------HLLSENTVGKLKRALRL 317
           R A      +LE   +        P P +  +               E     L R    
Sbjct: 219 RLAADNPAGVLEAARRGVALDPRAPEPLLLAMALLSPQLPARYAAQREEAGELLTR--HF 276

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
              +  +    +  ++  +++    +A A+  + ++  P      LL
Sbjct: 277 ATTSSATPNLRLYYARALVDIQRYAEAQAQLKIILQAQPDLADAWLL 323


>gi|330967418|gb|EGH67678.1| TPR domain-containing protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 556

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 45/276 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171
           +F  + LV LL  ++A    +++IA +         Q P   E A    Y  +  +G   
Sbjct: 28  SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGISERA----YQIAEYMGADQ 83

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--------- 222
           SA   A      +P       A   Q   A  +  ++ ++ +  +   + +         
Sbjct: 84  SALETALIWARNAPRDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143

Query: 223 ---------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
                                     L+  ++L     GD   S    +E     D  I 
Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKDGEIA 202

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316
             +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   
Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAA 260

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L +   +  E    ++ + LE  + ++A       +
Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 296



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            K+      Q    ++ L + L   + L  + +  A   LE ++   A  + A  +L   
Sbjct: 254 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 312

Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                D  SA   YA   +   PD            V     + A   L++ +    ++ 
Sbjct: 313 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 370

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L +  +        +   +    ++LK   +        A     +N   + E  
Sbjct: 371 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 427

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338
           L  I K  P   +A         +   +   A  L E       +    L  +  +   +
Sbjct: 428 LRSIIKREPENAMALNALGYTLSDRTTRYAEARELIEKAHQISPDDPAVLDSLGWVNYRL 487

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           G++D A      A++  P  E+   L ++  A   +  +       AL   PD
Sbjct: 488 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 539


>gi|298249211|ref|ZP_06973015.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963]
 gi|297547215|gb|EFH81082.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963]
          Length = 729

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 40/129 (31%), Gaps = 6/129 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LLE Q      +Y  A ++   ++           +L     R+GD  +A    TK L 
Sbjct: 520 RLLEAQ-----EKYAAAADQYRELIADLPGELPPQQALARVCARMGDDLTAVELFTKVLK 574

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241
             P        V    +  + W  A   L+   +  AK       +  +  S        
Sbjct: 575 ADPGNTEAVLGVTGSLLNLQRWDEAARVLSSINEAAAKYVEAQLMLCDLYLSRMVPLTPQ 634

Query: 242 MIASYHDAI 250
            + S   A+
Sbjct: 635 NVQSASQAV 643



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 4/129 (3%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++ R G+  SA+ +  +A  I+P++      + + Y+   E+  A+  + + ++ A    
Sbjct: 453 QALRGGNYVSAESFYKQAAKINPNSVDAHLRLAEVYIDTSEFGMALAEVTKVQRMAP--G 510

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +      R LE  +K    A+     E +      +      A+          A  +
Sbjct: 511 NWKVAWYTGRLLEAQEK--YAAAADQYRELIADLPGELPPQQALARVCARMGDDLTAVEL 568

Query: 283 LEKIWKVNP 291
             K+ K +P
Sbjct: 569 FTKVLKADP 577


>gi|262304969|gb|ACY45077.1| acetylglucosaminyl-transferase [Nymphon unguiculatum-charcoti
           complex sp. SEM-1997]
          Length = 288

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 6/165 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
             +  A   +    +    H + L  L    I   +     A +  +  L++      A 
Sbjct: 34  GLVQEAEDCYGTALRLCPSHADSLNNL--ANIKREQGFTEEATKLYQKALEVFPEFAAAH 91

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +L     + G LN A  +  +A+ I P        +       ++   A+    +  + 
Sbjct: 92  SNLASVLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 151

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
              +    A      +  + D G++  +      +LKL      A
Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDA 192



 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A        +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVQEAEDCYGTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +     ++L++      A    A  L  Q K   A +  ++  ++ P    A+
Sbjct: 66  EQGFTEEATKLYQKALEVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187


>gi|242213697|ref|XP_002472675.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728183|gb|EED82082.1| predicted protein [Postia placenta Mad-698-R]
          Length = 703

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 58/181 (32%), Gaps = 13/181 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY--NIAHEKL-- 143
           L   L ++       + K     S +    N   +  L     L +     + A  ++  
Sbjct: 510 LAQTLWAMGTEEGRESAKAQLLQSIESDPDNLLAINTLAGMGILTDDDSLVDAALSEILA 569

Query: 144 ----EMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
               + + + P    T     + L       GD+  A   + KA+ + P  P + + + +
Sbjct: 570 LPPDQRLARDPDREVTYLLVQHHLGQRHQTQGDVQQALSVSQKAVIVEPSRPEIRQTLAE 629

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +   +   ++  L     + +   + R  L +       +      ++  A +++ L 
Sbjct: 630 LVLQQGDGEGSLAVL--AATHQESLAQQRDSLYLRAIARCVNAKTQEEAHQLAHKAVMLT 687

Query: 257 D 257
            
Sbjct: 688 P 688


>gi|307152887|ref|YP_003888271.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306983115|gb|ADN14996.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 237

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 11/161 (6%)

Query: 133 ERQYNIAHEKL-EMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
              Y  A E   + +   P     +      +   +  D   A     KAL + PD    
Sbjct: 64  AGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLK--DFPKALEDFQKALQLEPDLVEA 121

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                  Y+   E+ +AI       K    +N N A       L   + G+ + +  +  
Sbjct: 122 YINRGNVYLELGEYQKAIADYTAALK----FNPNEAFAHNNIGLAYLNLGEPVRATLELT 177

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WK 288
           ++++L  N   A      +      ++KA    +K    W+
Sbjct: 178 KAVELDPNYGEAYYNRGLAFSDVGDQQKARSDFQKAAQLWR 218


>gi|194205879|ref|XP_001501439.2| PREDICTED: similar to Interferon-induced protein with
           tetratricopeptide repeats 1 (IFIT-1) [Equus caballus]
          Length = 534

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 71/232 (30%), Gaps = 33/232 (14%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                +  +  L         Q     + +E  L   +++ + +        + G L+ A
Sbjct: 281 RLNPEDAYIKALLALKLQDVGQEAEGEKYIEEALTNTSSQTYVLRYAAKFYRKKGSLDKA 340

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
            +   KAL  +P + +V   +        +  +     N + +     N  R   L    
Sbjct: 341 LQLFKKALKATPSSAFVHHQI--GLCYRGQVIQMKKAANWQPRGQDRKNVERIARLAISH 398

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           LE                +LK      +A +  A+  I     RKAE   +K+       
Sbjct: 399 LEF---------------ALKEKPTLDIAYVDLAEMYIEAGDHRKAEDTYQKV------- 436

Query: 294 EIANIYTHLLSENTVGKLK----RALRLEEINKESVESLVIVSKIALEMGSI 341
               +   +L E  + ++     R    +  +++      + +   +E  S 
Sbjct: 437 ----LTMKVLEEEKLQRVHFSYGRFQEFQNKSEDHAIIHYLKA-AEIENASF 483


>gi|146343872|ref|YP_001208920.1| TPR domain-containing protein [Bradyrhizobium sp. ORS278]
 gi|146196678|emb|CAL80705.1| putative TPR domain protein; putative O-GlcNAc transferase related
           protein [Bradyrhizobium sp. ORS278]
          Length = 652

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 79/263 (30%), Gaps = 43/263 (16%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L       G L+ A +   +AL + PDA    +A+ +   L    + A    ++  + A
Sbjct: 99  GLAQALRLAGRLDEAIKAYDRALQLRPDAVESWDALSELLQLTGRHAEAALACDRLLQLA 158

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +    RA            +G    +     + LKL  + + A+  A        +  +
Sbjct: 159 PD----RAPTWFRLGESLEAEGRRDEAALAFEQVLKLQPDHVDAANKAGAVHFDAGRYVE 214

Query: 279 A--------------EVIL--------------------EKIWKVNPH-PEIANIYTHLL 303
           A                +L                    ++   + PH P+IAN Y  +L
Sbjct: 215 AIAQFDQSLRQQPDQAGVLCLKGISLRRLRRYDEAQPFGQRAHALAPHDPDIANSYGCIL 274

Query: 304 S--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                    +    +   I  ++ +          E+   D+A A    A+ + P     
Sbjct: 275 QNLGRHDEAITVFEKAIAIRPQTADFHNHRGTSLAELHRFDEAFASFDRAIALRPDFADA 334

Query: 362 LLLAQIEQANSHNTDKILYWTQS 384
              A + +  + +      W   
Sbjct: 335 HWNAALFRLLAGD--FARGWAAR 355



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 95/241 (39%), Gaps = 24/241 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G L  A+    +AL +   +    +A+ +  V  K +  AI +  +  +  ++ +  
Sbjct: 37  LRAGQLTKAEETCRRALTLDAASIDALQAMGRVCVALKRFDDAIEWFARAIR--QDVSVP 94

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---- 280
            + + +A++L  A  G +  +      +L+L  +++ +    ++ L    +  +A     
Sbjct: 95  DSFIGLAQALRLA--GRLDEAIKAYDRALQLRPDAVESWDALSELLQLTGRHAEAALACD 152

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKR------ALRLEEINKESVESLVIVSKI 334
            +L+        P+ A  +  L  E+   + +R        ++ ++  + V++      +
Sbjct: 153 RLLQLA------PDRAPTWFRL-GESLEAEGRRDEAALAFEQVLKLQPDHVDAANKAGAV 205

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSALHAMPDP 392
             + G   +A A+   +++  P +   L L    + +   ++  +       AL A  DP
Sbjct: 206 HFDAGRYVEAIAQFDQSLRQQPDQAGVLCLKGISLRRLRRYDEAQPFGQRAHAL-APHDP 264

Query: 393 L 393
            
Sbjct: 265 D 265


>gi|330809222|ref|YP_004353684.1| hypothetical protein PSEBR_a2401 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377330|gb|AEA68680.1| hypothetical protein; putative TPR domain protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 394

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 4/128 (3%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L        + ++A+ +   A+   PD       +   Y+L  +  +A   L++     
Sbjct: 236 GLARLEFNELEFDAAEEHLKTAVQFMPDHIGTWHLLAWIYILRGDSIQARQALDRSYA-- 293

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              +RN        ++ +   G    +      +LKL  + + A    A  L       K
Sbjct: 294 --LDRNFGETHGGLAIVDVMDGMTERAQKGIRRALKLKPDGLSAHYAEALLLRQAGHPEK 351

Query: 279 AEVILEKI 286
           A  +++++
Sbjct: 352 AAQLIDQV 359


>gi|312080650|ref|XP_003142690.1| fic protein family protein [Loa loa]
 gi|307762143|gb|EFO21377.1| fic protein family protein [Loa loa]
          Length = 473

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE-- 318
           A++ AA    +Q    KAE+I++    + P HP+I   Y  L+ E     +  A  L   
Sbjct: 120 AALKAAVQSRTQGNMAKAELIIQHALALAPHHPDILTEY-GLVVEMGRKNVVEAEELYSR 178

Query: 319 --EINKESVESLVIVSK 333
               N    E+L+  ++
Sbjct: 179 ALSYNPHHPEALIRRAR 195


>gi|298245328|ref|ZP_06969134.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552809|gb|EFH86674.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 591

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 39/117 (33%), Gaps = 4/117 (3%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     +AL + P +      +   +    +++ A+    +        N   A+  
Sbjct: 472 PEEALASYQQALALDPRSFQAWNGLGNVHSSLLDYTGAVDAYTRAL----TVNPRSAVAW 527

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             ++   +  G   A+     E+ ++      A +  A+   S    ++A+   ++ 
Sbjct: 528 CNKAEALSRLGHNRAALDALNEATEMDKGYTRAWLLKAEVYESLGNTQEAQKARKRA 584


>gi|293376722|ref|ZP_06622945.1| tetratricopeptide repeat protein [Turicibacter sanguinis PC909]
 gi|292644679|gb|EFF62766.1| tetratricopeptide repeat protein [Turicibacter sanguinis PC909]
          Length = 416

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 74/206 (35%), Gaps = 23/206 (11%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + ++ D   A++   +  ++ P    +   + + Y+  +++ +A+  + +   +  E+N 
Sbjct: 212 AYQLNDEVEAKKVFQELKELDPSYDTIYPILAKIYLKEEDYEKALEMVAEGMTHN-EYN- 269

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L   +        D  A+     E+L L    + +++ + +  +      +    +
Sbjct: 270 --AELYSIKGTALEKLKDFEAARDAYYEALNLDPEDLESALRSNRICLMLEDYEEVVHNI 327

Query: 284 EK-----------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +             W      ++A  Y  L   +         +   +  ++VE L   +
Sbjct: 328 KHYEENGLYDDHFTW------DLAIAYLELEEYDEAK--ACFEQGAALFADNVEFLFDYA 379

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358
           +  +E G  ++A       +++ P  
Sbjct: 380 QFLIEEGLSNEAIKLLERILQLDPSA 405


>gi|289613279|emb|CBI59873.1| unnamed protein product [Sordaria macrospora]
          Length = 460

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 46/161 (28%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A +W +AI F ++      E N         R+  +        +  DA ++++L    
Sbjct: 20  AAHDWPKAIEFYDKAI----ELNDKEPTFWSNRAQAHLKTEAYGYAIRDATKAIELNPGF 75

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
           +       K+   +                      A  Y  +L+      +K      +
Sbjct: 76  V-------KAYYRR----------------------ATAYAAILN--PKEAVKDFKTCVK 104

Query: 320 INKESVESLVIVSK-----------IALEMGSIDQAHAKAM 349
           I  ++ ++ + + +            A+E+G    A     
Sbjct: 105 IAPDNKDAKLKLVECEKIVRQLAFFAAIEVGDELSAAEGLD 145


>gi|260460555|ref|ZP_05808806.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
 gi|259033660|gb|EEW34920.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
          Length = 280

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 13/182 (7%)

Query: 85  YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           Y+A     L+     N   A  +  Y        N    Y+    +     +   A    
Sbjct: 100 YQAYSNRALIQRFLGNQEAA--LADYNRSIQINGNYDAAYIGRGNLYRKAGRTQDAFNDF 157

Query: 144 EMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           +  +Q+  T   A     L ++S   G    A    + A+ ++PDA          Y+  
Sbjct: 158 QKAIQLDTTDARAYHNRGLIYQSQ--GQHKFAIEDFSTAISLAPDAAEPYNGRGLSYLAT 215

Query: 202 KEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +   A +  N   K + K            ++L    +GD   +     E+++L     
Sbjct: 216 GDEDNAFSDFNMAIKLDGKNAEAW-----ANQALIYERRGDKAKAAKSYKEAVRLNPTYQ 270

Query: 261 MA 262
            A
Sbjct: 271 PA 272


>gi|146306571|ref|YP_001187036.1| TPR repeat-containing protein [Pseudomonas mendocina ymp]
 gi|145574772|gb|ABP84304.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas mendocina ymp]
          Length = 250

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 6/154 (3%)

Query: 135 QYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALD-ISPDAPWVT 191
                   L  +      R+      +L  E  R+G    A ++   AL  I  DAP + 
Sbjct: 67  DSIDPERHLRALRDELEIRDTRDTRVNLADELLRMGQAEEAAKHYQIALRGIHSDAPDIL 126

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             + +      +++     L+Q   +  ++  +   LL AR+LE           + A+ 
Sbjct: 127 LGLARARFALGDFAGCQASLDQLIAHNPDFRSSDGHLLYARALEGQGNDLKAEEEYRALG 186

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           S         A+   A  L    ++R+A  +L++
Sbjct: 187 SYCASPE---ANYRYALLLRRMGRQREAVDLLQQ 217


>gi|329112549|ref|NP_001192276.1| interferon-induced protein with tetratricopeptide repeats 1 [Pan
           troglodytes]
          Length = 478

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLEKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262
                +    +   A+ ++  +  KG       + ++            +++      +A
Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAE 280
            +  A+  I     RKAE
Sbjct: 343 HLDLARMYIEAGNHRKAE 360



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 21/146 (14%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMML----QIPAT--REFAVYSLYFESCRIGDLNSA 173
            + +L   ++ +    +  A E    ML     +  T       Y  + E  +  D+N+ 
Sbjct: 340 EVAHLDLARMYIEAGNHRKAEESFRKMLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAI 399

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             Y  KA+ I            +Q  LA++  ++I  L +               L    
Sbjct: 400 IHYL-KAIKI------------EQASLARD--KSINSLKKLVLRKLRRKALDLESLSLLG 444

Query: 234 LENADKGDMIASYHDAIESLKLCDNS 259
                +G+M  +      +L+L  + 
Sbjct: 445 FVYKLEGNMNEALEYYERALRLAADF 470


>gi|85077237|ref|XP_955993.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A]
 gi|2290382|gb|AAB65138.1| serine/threonine protein phosphatase PPT1 [Neurospora crassa]
 gi|28917032|gb|EAA26757.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A]
 gi|28950344|emb|CAD70968.1| phosphoprotein phosphatase (ppt-1) [Neurospora crassa]
          Length = 479

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 46/161 (28%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A +W +AI F ++      E N         R+  +        +  DA ++++L    
Sbjct: 20  AAHDWPKAIEFYDKAI----ELNDKEPTFWSNRAQAHLKTEAYGYAIRDATKAIELNPGF 75

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
           +       K+   +                      A  Y  +L+      +K      +
Sbjct: 76  V-------KAYYRR----------------------ATAYAAILN--PKEAVKDFKTCVK 104

Query: 320 INKESVESLVIVSK-----------IALEMGSIDQAHAKAM 349
           I  ++ ++ + + +            A+E+G    A     
Sbjct: 105 IAPDNKDAKLKLVECEKIVRQLAFFAAIEVGDELSAAEGLD 145


>gi|225717778|gb|ACO14735.1| TPR repeat-containing protein YDR161W [Caligus clemensi]
          Length = 350

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 29/193 (15%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E+    D   AQ    +AL +  D P   E      + A E  +AI FLN+  +   E  
Sbjct: 18  EAINRYDYFEAQGLLQEALALDNDHPKALELSSFLLLEAGEVEKAIEFLNKAIRVQPEEG 77

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +   L   S           S     + + L      ++           + ++A   
Sbjct: 78  YEKYFTLAQLSSGQ-------ESLDIYQKGITLLSRLRPSA-----------ENKRA--- 116

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKL---KRALRLEEINKESVESLVIVSKIALEMG 339
           L   +       IA +YT  L ++   ++   K     +E + ++ E+L + ++  L   
Sbjct: 117 LSNAYIS-----IAELYTTDLCDDESAEVECTKAIQLAQEADSDNPEALQMKARYNLIKE 171

Query: 340 SIDQAHAKAMLAM 352
             D+A A    ++
Sbjct: 172 QFDEARAAMSESL 184


>gi|74220502|dbj|BAE31468.1| unnamed protein product [Mus musculus]
          Length = 463

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                   +  + +L         ++  A   +E  L   + + + +        R   +
Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A     +AL  SP + ++                         +    + +  + L  
Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295

Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +R+ +   + ++      AI    E+LKL     MA +C A+     ++  +AE   +K 
Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                      +  H+  +  +    R  R  + +K+S +  + +    L++     A  
Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405

Query: 347 KAMLAMKIAPRKEIF 361
           K + A++    + + 
Sbjct: 406 KLLTALEKVAERRVC 420


>gi|146279162|ref|YP_001169321.1| sulfotransferase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557403|gb|ABP72016.1| sulfotransferase [Rhodobacter sphaeroides ATCC 17025]
          Length = 720

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 76/272 (27%), Gaps = 36/272 (13%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +   A E+   ML I      A + L            A  +  +A    P    V +
Sbjct: 25  AGRLPEAEERYRSMLAIAPDDAAASFHLGRLLATRRAPE-ALDHLGRAARTRPQEAAVWQ 83

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A          WS A               R   I     +   A     I     A ++
Sbjct: 84  A----------WSTAAATF------GDGAARQSVIEAAREARLPALLLQQIEGRLSAGQA 127

Query: 253 LKLCDNSI----MASICAAKSLISQNKK----RKAEVILEKIWKVNPHPEIANIY----- 299
             +    I     A + A  +     +     R+A  IL+        P+ A        
Sbjct: 128 KPVAQPRIGRAAPAEVKALLTDYQAGRMPAAERRALAILKAA------PDCALAADVLGN 181

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             +        L    R   +     +  + +++  L +G   +A      A  ++ +  
Sbjct: 182 ARMALGQPATALAAFQRATALEPGWPDGHLHLAQALLALGRPAEALDPLGRAASLSRKPA 241

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             L+L  +  A      + L   + A+ A PD
Sbjct: 242 RALILLAVTLARLGRPAQALAALKRAVAAEPD 273


>gi|325473103|gb|EGC76299.1| lipoprotein [Treponema denticola F0402]
          Length = 598

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTH--LLSEN 306
           E+ KL   S++            NK  +A  + +K W+++   +P     Y H    S N
Sbjct: 196 EAQKLRPQSVLTYYLLGLYKEKTNKLTEAVTLYQKAWQLDSSCYPA-GFKYGHFAAESGN 254

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
               LK A  L  I  ++ E  ++ ++  +    +++A    +  +K  P     LLL
Sbjct: 255 GTEALKIADTLNNIYNDNTEVKLLYAQAHIAKNDLNKASENIVSILKKEPENISALLL 312


>gi|88602724|ref|YP_502902.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88188186|gb|ABD41183.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 1067

 Score = 42.6 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 53/285 (18%)

Query: 125 LEVQIALAER-QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L       E  +   A E+   +   P      +  +     +     +A  +  + L +
Sbjct: 479 LNALAYEHENQKLIKASERFIELFG-PDAEVLFLLGVAQYELKQ--YEAALHHFRETLKL 535

Query: 184 SPDAP----WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---------------WNRN 224
             D      W    +++ Y    +++ AIT     + N  +                   
Sbjct: 536 DKDHTDALFWAGLTLLELY----QFTEAITAFEGVEDNHPDDDQAWYYHGKALVALHELQ 591

Query: 225 RAILLIARSLEN-----------ADKGDMIASYHDAIESLKLCDNSIM----ASICAAKS 269
           +A  ++  SL+            AD      +Y DA++S+    +            AK 
Sbjct: 592 KAEFILKHSLQLNDQSADAWYLLADVQHTRKAYADALQSVGKALDLSPSNNEILKLKAKI 651

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLK--RALRLEEINK 322
            ++    R A     + +     P+ ++      Y   L      +    R  RL   ++
Sbjct: 652 QVALGSFRGAC----QTYAAISEPDASDTEVLTGYMRALYHTGQFREAYSRVTRLLVKDE 707

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
           ++ +   + ++I    G  D+A      A K AP  +  L L  I
Sbjct: 708 KNPDLWRMRAEIERAQGLFDEAANALTEACKYAPNNKKLLSLQAI 752


>gi|332975002|gb|EGK11912.1| hypothetical protein HMPREF9374_1775 [Desmospora sp. 8437]
          Length = 446

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 16/132 (12%)

Query: 165 CRIGDLNSAQRYATKALDIS-----PDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKK-N 217
            R G    A +YA   L+++     P     +   + + Y+   +W +A    +      
Sbjct: 251 QRTGVYQEAIQYAEAGLELARFNYQPSHMFDLWIVLAEVYMKQGDWEQAEECFDLALTLR 310

Query: 218 AKEWNRNRAILLIARS---LENADKGDMIASYHDAIESLKL------CDNSIMASICAAK 268
            K  + +R   + A S   L          +     ++++L            A      
Sbjct: 311 GKISSSDRDKFITAYSRLGLLYMKLNRQEEAAEMLEKAIRLGESCDDVPRLTTALHLMGD 370

Query: 269 SLISQNKKRKAE 280
             + QNK+ +A 
Sbjct: 371 FHLQQNKREEAA 382


>gi|320451054|ref|YP_004203150.1| signAl transduction histidine kinase containing a receiver domain
           [Thermus scotoductus SA-01]
 gi|320151223|gb|ADW22601.1| signAl transduction histidine kinase containing a receiver domain
           [Thermus scotoductus SA-01]
          Length = 723

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 29/165 (17%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKE----WSRAITFLNQ-------- 213
           D   A+ +  +A+   PD       +   +       E    + +A+  L+         
Sbjct: 557 DPAGAEAFLRRAVSAFPDDAEALGELAFALYLQGRHGEAKPLYEKALALLDSPDIRVRYA 616

Query: 214 ----KKKNAKEWNRNRAILLIA----------RSLENADKGDMIASYHDAIESLKLCDNS 259
                 K   E   +  ++L             +      G    +   A + L +  + 
Sbjct: 617 RLLYHMKRYGEAEASYRLVLAGDPGNLDARWGLAEVVLALGRAKEAELLARQVLAMEPSY 676

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
            +A    AK+L+ Q ++ +A+V+L +  ++ PHPE+A +   +L 
Sbjct: 677 PLARFTLAKALLEQGRREEAKVLLREELRLRPHPEVAELLNRVLG 721


>gi|294626105|ref|ZP_06704712.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292599554|gb|EFF43684.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 562

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L  A+     
Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 372

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 373 ASADDDARRDAYVLEAELHQRAGDAPGELGAFERGLAAYPD----DSALLYARGLAWERR 428

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 429 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 545 RLDPDNRAL 553


>gi|289192976|ref|YP_003458917.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
           FS406-22]
 gi|288939426|gb|ADC70181.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
           FS406-22]
          Length = 284

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 20/206 (9%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  ++    D +         L + PD P           +  ++  A+  L++  ++  
Sbjct: 22  LMSKALNKIDES--IEVLEDILKVPPDHPITNFLKGLLLSITGDFENALKLLDEALESNP 79

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
               N AI+   ++        +  S  +  E LK+    + A +  A+ L    +   A
Sbjct: 80  ----NNAIVKYLKAHVYEHLNVIDKSLKEYDEILKINPFLVPAWLRKAEILRKLGRYEDA 135

Query: 280 E----VILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIV 331
                 +LE        P I   Y               L    +  EI  + + +L+  
Sbjct: 136 LECYNKVLEIT------PNITAFYGKALVLHKLGELEEALNCLNKALEIKPDFLLALIKK 189

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           ++I + +  + +A      A +I P 
Sbjct: 190 AQILISLNKLSEAIITLKRASEIRPD 215


>gi|209527043|ref|ZP_03275559.1| sulfotransferase [Arthrospira maxima CS-328]
 gi|209492554|gb|EDZ92893.1| sulfotransferase [Arthrospira maxima CS-328]
          Length = 514

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 41/101 (40%), Gaps = 2/101 (1%)

Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L  Q        + + A      ++ I     +A + L     + G+L+ A  + ++ L 
Sbjct: 6   LLRQANQLKRSGKLDEAIALYHQVIDINPHFAWAYHGLGDAWAKQGNLDEAVAWYSECLK 65

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           I PD+ W+  ++ +      +   A+ +L +      ++++
Sbjct: 66  IHPDSAWLYYSLGEVLAELGDLEAAVDYLQKAIDIKPDFHK 106


>gi|189091788|ref|XP_001929727.1| hypothetical protein [Podospora anserina S mat+]
 gi|188219247|emb|CAP49227.1| unnamed protein product [Podospora anserina S mat+]
          Length = 526

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 56/189 (29%), Gaps = 17/189 (8%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++ AA  +     +    +            L   Q  L++ + N A    +  +    +
Sbjct: 8   LAFAAGFLSTPSMVSGLSTSDIPADTPISALLASAQSHLSKGETNDALVYYDAAIARDPS 67

Query: 153 REFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  L+  +     +G  + A     K L I P        + +    A +W  A  
Sbjct: 68  NYLT---LFKRATTYLSLGRRSQATDDFEKVLSIKPTFEGAHLQLGKLRASAADWDGAKL 124

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              + KK  +      A      +   A  G+         E +K  D+    +I  A  
Sbjct: 125 HYKKAKKTEEVAAVEAAKAAAKAAEAAAKAGN-------WEECVKQADD----AILTANR 173

Query: 270 LISQNKKRK 278
            I   + RK
Sbjct: 174 AIHLRELRK 182


>gi|158338828|ref|YP_001520005.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158309069|gb|ABW30686.1| TPR domain protein, putative [Acaryochloris marina MBIC11017]
          Length = 307

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 20/149 (13%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            +L  Q      +   A +    +L        A+     L  E  R    ++A      
Sbjct: 124 QVLLAQTLQKTGKRESAAQTYRSILATEPGNMDALQGFVNLLVEQQR---PSAATELLQT 180

Query: 180 ALDISPDA--------PWVTEAVV--QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            L  +P A              ++  Q Y   +++ +A+   ++    AK+ N  R +  
Sbjct: 181 TLKNAPQANQVKPNSINESAVQLLLGQVYATQRQFDQAVGVYDK--LIAKDPNDFRPVF- 237

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDN 258
            A+++   ++G    +      + KL   
Sbjct: 238 -AKAILLREQGKTKEADILFNSAEKLAPG 265


>gi|186475487|ref|YP_001856957.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184191946|gb|ACC69911.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
          Length = 615

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 76/278 (27%), Gaps = 16/278 (5%)

Query: 72  LFHMLHKRNYDKGYKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
           +      R  D   +  L   L ++      L + +  + +         + +       
Sbjct: 58  VRRAADLRPQDAALQLNLGNALKALG----RLDQAIERFRNALTLAPTFPMAHYNLGNAY 113

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
               ++  A +  +  L++      +  +L      +G    A     +AL++ P     
Sbjct: 114 ALAGRHEDAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRALELRPGHAGA 173

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +          + A        K    +   R       +      G    +  +  
Sbjct: 174 HNNMGMALNALGSATEAGAHFRAALKIEPRFVAAR----FNLANTLDATGQHEQAVTEFE 229

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSE 305
             L +  +   A      +L S  +  +A    E+   ++P   +A       +  L + 
Sbjct: 230 AVLAMQSSLPPALFGLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAH 289

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +   +     +   +  +   + +      L +G   +
Sbjct: 290 DAAVRA--FDQALRLRPDLPMAHMNRGVALLTLGDFKR 325



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 4/166 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A  + + + A       L +      A++ L     + G    A     +A D+ P
Sbjct: 7   RAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRP 66

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
               +   +           +AI         A  +      L  A +L     G    +
Sbjct: 67  QDAALQLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYAL----AGRHEDA 122

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                +SL+L      + +    +L +  + R+A     +  ++ P
Sbjct: 123 VDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRALELRP 168



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 71/265 (26%), Gaps = 13/265 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A  +    +       +  + L       A  + + A E+    L +  T   A 
Sbjct: 49  GQHEEAADLVRRAADLR--PQDAALQLNLGNALKALGRLDQAIERFRNALTLAPTFPMAH 106

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L       G    A     K+L + P        +            A     +    
Sbjct: 107 YNLGNAYALAGRHEDAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRAL-- 164

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E     A       +     G    +      +LK+    + A    A +L +  +  
Sbjct: 165 --ELRPGHAGAHNNMGMALNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHE 222

Query: 278 KAEVILEK--IWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A    E     + +  P +    N    L          R  R   ++     + + + 
Sbjct: 223 QAVTEFEAVLAMQSSLPPALFGLGNALASLGRHAEARP--RFERAVGLDPAFALAWLSLG 280

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
                +G+ D A      A+++ P 
Sbjct: 281 AAHHALGAHDAAVRAFDQALRLRPD 305


>gi|254295602|ref|ZP_04963060.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
 gi|157805565|gb|EDO82735.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
          Length = 614

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|254192260|ref|ZP_04898749.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254259170|ref|ZP_04950224.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
 gi|157987455|gb|EDO95231.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254217859|gb|EET07243.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
          Length = 614

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|254181068|ref|ZP_04887666.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
 gi|184211607|gb|EDU08650.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
          Length = 614

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|296314663|ref|ZP_06864604.1| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC
           43768]
 gi|296838576|gb|EFH22514.1| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC
           43768]
          Length = 616

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 55/311 (17%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 74  LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132

Query: 184 SPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            P      + +      L  E ++ +  L +    A +    R  LL+A++    D    
Sbjct: 133 EPIPGKAQKRMAWLRSVLKGEENQRLDGLEEVLVQADDGQNRRIFLLLAQAAVQQDGLAK 192

Query: 243 IASYHDAIESLKLCDNSIMASI---------------CAAKSLISQNKK----------- 276
            AS      +LK   +   A++                AA   +++              
Sbjct: 193 KASEAVHRAALKYE-HLPEAAVADVVFNVQVREKDKAIAALQHLAKLDTEILPPTLVTLR 251

Query: 277 ---RKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKES 324
              R+   IL   ++      ++ ++  +           ++   +LK    L + N  +
Sbjct: 252 LVARRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLHRPDDAYERLK---VLLDANPNA 308

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHNTDKI 378
                +  + A+   +  +  +     ++ A       ++    L A +  A+  +  K+
Sbjct: 309 D----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRDYAKV 364

Query: 379 LYWTQSALHAM 389
             W +  + A 
Sbjct: 365 RQWLKK-VSAP 374


>gi|149912520|ref|ZP_01901054.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b]
 gi|149812926|gb|EDM72752.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b]
          Length = 828

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 98/336 (29%), Gaps = 52/336 (15%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEY----LVYLLEVQIALAERQYNIAHEKLEM--M 146
           M+I A N   A + H   + +    N      +  L   +    +     A E L+   +
Sbjct: 108 MAINARNWEEAER-HGRAAAELDADNPRTRIVITALDYAKAFRDDNPVAAADEALKARDL 166

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L+       A   +  +  R GDL++A       L++ PD   +    +Q     ++   
Sbjct: 167 LEENPESLIARQLVIDQYLRSGDLDAAMAAVETGLEMHPDVFELHSTKLQIQANRQDMDA 226

Query: 207 AITFLNQKKKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIES------------L 253
               L             R +L+      ++ D  +       A ES            L
Sbjct: 227 IGGTLRTMVDRFPANENTRRMLITYYIERDDLDSAEAYLRELAAAESAGKDEKLTVVRFL 286

Query: 254 KLCDNSIMA-----------------SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           +     + A                     A     +  + KA   +E +       + A
Sbjct: 287 RETKGLVAARTELERLVDTEEDDIAYRALLASIAFEEGDRAKAISDMEALLDATAAADEA 346

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  SE    +L+              + V+++++ LE G+   A A+    ++  P
Sbjct: 347 EAEDAAESETKQDRLR--------------ARVVLARMLLETGNTVGARAQVEEILQDDP 392

Query: 357 RKEIFLLL-AQIEQANSHNTDKILYWTQSALHAMPD 391
                L + A          D IL    +      D
Sbjct: 393 TNVDALKMRAAWLIDEDKPDDAILDLRAALAEQPRD 428



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 6/98 (6%)

Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKESV 325
           +L+ Q    +A V    ++K++P H E    Y    L +E       + LR+ E   ++ 
Sbjct: 40  ALLEQGDVARALVEFRNVFKLDPLHKEARLTYARTQLENEAYGDAYSQYLRVVEQFPDTF 99

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKEI 360
           E+ + ++++A+   + ++A      A ++    PR  I
Sbjct: 100 EARIELAEMAINARNWEEAERHGRAAAELDADNPRTRI 137


>gi|79458493|ref|NP_567193.2| zinc ion binding [Arabidopsis thaliana]
 gi|75222970|sp|Q5M757|ZDH15_ARATH RecName: Full=Probable S-acyltransferase At4g00840; AltName:
          Full=Probable palmitoyltransferase At4g00840; AltName:
          Full=Zinc finger DHHC domain-containing protein
          At4g00840
 gi|56461762|gb|AAV91337.1| At4g00840 [Arabidopsis thaliana]
 gi|57222210|gb|AAW39012.1| At4g00840 [Arabidopsis thaliana]
 gi|110738461|dbj|BAF01156.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656544|gb|AEE81944.1| putative S-acyltransferase [Arabidopsis thaliana]
          Length = 291

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 12/96 (12%)

Query: 2  LRLIRYFFVISLVIC-SFIIVSHYPEDVSITW-----GNRLYRTSPFVILSILYFFLFAW 55
          L+++ YF ++ +V        +     V  TW            S    L I  F     
Sbjct: 10 LKVLGYFMILLVVAVVGVSYYA----VVVSTWWPILIRGDHGALSALAALIIFVFHFLLI 65

Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG 91
          +LL++      + P  +      R    G  +L  G
Sbjct: 66 MLLWSYFTTVFTDPGSVPEHF--RREMGGGDSLEAG 99


>gi|81428625|ref|YP_395625.1| hypothetical protein LSA1014 [Lactobacillus sakei subsp. sakei 23K]
 gi|78610267|emb|CAI55316.1| Hypothetical protein LCA_1014 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 421

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 41/142 (28%), Gaps = 20/142 (14%)

Query: 160 LYFESCRIGDLNSAQRYATKALDI----------------SPDAPWVTEAVVQQYVLAKE 203
           L+ ++ +  D  +    A +   +                 PD   +   +    V   +
Sbjct: 22  LFQKALKEDDPETLYSLAEELYAMGFLEQASTIYQQLLAQFPDEDQIRTTLADIAVSNGQ 81

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  A+  L     +    +   A  L+  +      G    S    + +L+L  +  +  
Sbjct: 82  YDDALNLLT----DITPESNAYAESLLTAADVYQTMGLPEVSEQKLLTALRLYPDEPVMQ 137

Query: 264 ICAAKSLISQNKKRKAEVILEK 285
              A+      +  KA    E 
Sbjct: 138 FALAELYFEMGEYGKAANYYEA 159



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 80/263 (30%), Gaps = 22/263 (8%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----LYF 162
              ++    + +E ++     ++     +Y  A    E ++      E    +    L  
Sbjct: 121 QKLLTALRLYPDEPVMQFALAELYFEMGEYGKAANYYEALI-DQDVLELGQVNIQKRLAT 179

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEW 221
                G    A +                +  +   Y+  K++ +AI  L + +    ++
Sbjct: 180 SYASSGAFEEALQIYEIMTVEF--LTEDDQFQMGFLYLQIKDYQKAIEILTKLQLADPQY 237

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                 L  A+  +N  +     +       +     S +     +   +     + AE 
Sbjct: 238 TSLYVYLATAQEAQNELQ----EALTAVQTGIGYDMYSEVLYQKGSDLALQLGDDQVAEQ 293

Query: 282 ILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +L K  ++NP        ++ +Y           +         +K + E    +++   
Sbjct: 294 MLNKALEINPDNMGEISALSQVYRRQNRH--AENVAFVQEAIANHKPTAELYWSLAQSQF 351

Query: 337 EMGSIDQAHAKAMLA---MKIAP 356
            + + D A    +LA   +K  P
Sbjct: 352 ALEAFDDARENYLLAYPELKDNP 374


>gi|313681838|ref|YP_004059576.1| diguanylate cyclase/phosphodiesterase with gaf sensor
           [Sulfuricurvum kujiense DSM 16994]
 gi|313154698|gb|ADR33376.1| diguanylate cyclase/phosphodiesterase with GAF sensor
           [Sulfuricurvum kujiense DSM 16994]
          Length = 1862

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 12/112 (10%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA---------VVQQYVLAKEWSRAIT 209
            L  ES        A +YA  A+ + P+  W             +++    A+ +  A+ 
Sbjct: 734 HLAKESL---AYEEAIKYAQAAISLFPENSWRENYEITCSIYLNLLESLSQARRYQEALV 790

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              Q   N      + A +   R   +  +G +  +  D  ++L++ +  I 
Sbjct: 791 LFEQLLSNGLLKKIDIAKIYNLRLTYHFSQGLLSEAIEDGRQALRVLNQEIP 842


>gi|261253580|ref|ZP_05946153.1| zinc metalloprotease [Vibrio orientalis CIP 102891]
 gi|260936971|gb|EEX92960.1| zinc metalloprotease [Vibrio orientalis CIP 102891]
          Length = 491

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 13/161 (8%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A++W         K+   K     +      ++L + D   +  +     + +K   ++
Sbjct: 296 AAQDWF--------KRTQKKVAPNLKVAFEYGKALVHLDDNQLDQAALILNDLIKQDPHN 347

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTH--LLSENTVGKLKRALR 316
           +      +   I+Q +  KAE +L++  K  P+  +  I Y +  L  E     +K   R
Sbjct: 348 LFYLDAMSDLYIAQKQADKAESLLKQALKSAPNNAVITINYANALLKQEKNEEAVKVLQR 407

Query: 317 LEEINKESVESLVIVSKIALEMG--SIDQAHAKAMLAMKIA 355
               N + V    ++S+ ++ +G    D A    +LA+K  
Sbjct: 408 YTHDNPKDVNGWHLLSEASIHLGKSDEDLAARAEILALKAN 448


>gi|254673315|emb|CBA08467.1| TPR domain protein [Neisseria meningitidis alpha275]
          Length = 552

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +K+ KA   L+++ K       
Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGRKKEKAIGALQRLAKLDTEILP 242

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +      + A       ++    + A +  A+  +
Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 358

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 359 YTKVRQWLKK-VSAP 372


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 15/105 (14%)

Query: 190 VTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARSLENAD-KG 240
             +AV+          A+EW  AI    + +        +   R +    R+    + + 
Sbjct: 118 AKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRA 177

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               +   A+++  L    +      A           A  +L+ 
Sbjct: 178 VHAYALKLALDAHPLVPGFL------AGMYAENADVAAATRVLDA 216


>gi|186470573|ref|YP_001861891.1| tetratricopeptide TPR_4 [Burkholderia phymatum STM815]
 gi|184196882|gb|ACC74845.1| Tetratricopeptide TPR_4 [Burkholderia phymatum STM815]
          Length = 594

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)

Query: 78  KRNYDKGYKA--------LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL---LE 126
           +R Y++  +         L  G +         A  + +          + L Y    L 
Sbjct: 445 QRRYERALEVNPNDSLAWLLKGTLLAFEGEGEQA--VDATERALRLSPLDPLRYFYESLG 502

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
              AL+  +Y  A E  +  L++  T    + +L      +GDL +A++   + L + P 
Sbjct: 503 ATAALSAGRYERAVELAQRSLRVNRTNTSTLRALAIAQALLGDLEAARQTVQEVLLLDPS 562

Query: 187 AP 188
             
Sbjct: 563 LT 564


>gi|91204151|emb|CAJ71804.1| conserved hypothetical tpr repeat protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 817

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 73/227 (32%), Gaps = 17/227 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPWV 190
             Y  A  + +  L+I      A Y+L   Y     IGD  +A     KA+  +P     
Sbjct: 433 GMYEKAEYEYKKTLEIKPNDAGAYYNLGNLYERKELIGDAIAAY---EKAIQSNPYHADA 489

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   Y   K++  A+    +  +      R  + L     L   +  +   S    +
Sbjct: 490 YNNIGNIYKKKKQYPAAVKMYEKAIRCNPFDFRYHSNL----GLIYLETKNYRESVDAFL 545

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305
           ++LK+  +           L        AE   +   +++P     H  +  +YT++   
Sbjct: 546 KALKIAPDKSSTHNSLGNVLKEMGDFDGAEEAYKTALQLDPADANIHNSLGMLYTNMKQF 605

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +   +         ++ +   +   +       G  ++A      A+
Sbjct: 606 DKAMR--EFDTAIRLDPKMASAYNNLGIAYANKGDGEKAAEALNTAV 650


>gi|50553969|ref|XP_504393.1| YALI0E25696p [Yarrowia lipolytica]
 gi|49650262|emb|CAG79993.1| YALI0E25696p [Yarrowia lipolytica]
          Length = 488

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 59/198 (29%), Gaps = 26/198 (13%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           I A  +  A      + ++ +     L   L  QI     +   A               
Sbjct: 162 IGAGELDQASSNVVGLLREDSSD--PLALTLRAQILYYNGEMAAAITH------------ 207

Query: 155 FAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                   ++ R   D + A+    +  +I         A       + +++RA     +
Sbjct: 208 ------LQQALRNDPDNSKARTLLKQIKEIDRKREEGNSAF-----KSGQYARAKELYTE 256

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                       A +   R+  N   GD   +  D   +L+   + + A    A++L S 
Sbjct: 257 TLALDPTNKLVNAKIYSNRATANVKLGDFEDALKDCDLALEADPSFVKARKTKARALGSL 316

Query: 274 NKKRKAEVILEKIWKVNP 291
            K   A    ++  + +P
Sbjct: 317 EKWEDAVNEFKQAMEADP 334


>gi|88705135|ref|ZP_01102847.1| TPR/sulfotransferase domain protein [Congregibacter litoralis KT71]
 gi|88700830|gb|EAQ97937.1| TPR/sulfotransferase domain protein [Congregibacter litoralis KT71]
          Length = 535

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 21/219 (9%)

Query: 185 PDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           P+A W+   + +    +   + + A     Q  +   +      ++     +   +  D+
Sbjct: 7   PEAVWLKAKLREGYDRLQRGDQNGAAQCCRQILQRKPDLPEGHFLV----GMIALETNDI 62

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------- 294
             +        KL  +   A    A+  I + +  +AE  LEK      H +        
Sbjct: 63  RTAIQGFGSVTKLQPDHGAAWAQLARIFIRRGQVNRAEDALEKA---VAHADDNPAIQDT 119

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           IA++YT L +       +   +  +    ++  ++  +   + +G   +A      A+  
Sbjct: 120 IASVYTLLGNAAAASPWQ--EKALQHQPANIGFVINRANNLMFLGDFSRARELLESAIAR 177

Query: 355 AP-RKEIFLLLAQIEQANSHNT-DKILYWTQSALHAMPD 391
            P       LL+ +E+A +HN    +            D
Sbjct: 178 HPGHANAHWLLSGLEKARNHNHITVLREILDRESRNDRD 216


>gi|307206508|gb|EFN84534.1| Tetratricopeptide repeat protein 28 [Harpegnathos saltator]
          Length = 2105

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 26/219 (11%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
           +H+R  +   +A   GL + A   + +A +    + +   FH + L              
Sbjct: 739 MHQRQLNLARQAADRGLEAAAYGALGIAHRATKNLDKALGFHTQELTL------RQEAGD 792

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEA 193
                     +  +           Y  + +     L  A+  A   ++       +  A
Sbjct: 793 LRGECRAHGNLGAV-HMAL----GQYTHAVKCYQEQLERAKELADSGVEAQ-ALGNLGIA 846

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +        +  AI +  Q+    +      A+L  AR+L N   GD   +  D  E++
Sbjct: 847 RLNM----AHYEDAIGYFEQQLATLEPLTTGTALLDKARALGNL--GDCYEALGDLEEAI 900

Query: 254 KLCDNSIMASICAA------KSLISQNKKRKAEVILEKI 286
           K  +  + A+I         ++     + R+A   L++ 
Sbjct: 901 KCHEQQLTAAIKLKSIRDQERAYRGLGRAREATGNLQEA 939


>gi|302391014|ref|YP_003826834.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302203091|gb|ADL11769.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 708

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 37/263 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + +       Y  + +  + +L+  + R     +L      +GD  SA       L    
Sbjct: 49  KARTEYYNGAYRESIKLYQEVLEKSSARIDTRKNLAVVYETVGDYKSAVNQYEAVLSTDS 108

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR---SLENADKGDM 242
           D   V   + + Y    ++++A+    +  K A E+  N AIL +A    +  + ++ D 
Sbjct: 109 DEHSVYYDLGELYYSLGKYNQAL----KNTKQAVEYIENEAILKLAYLKLAQIHKERSDY 164

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIAN 297
             +     ++LKL  +S +A   + +     ++ ++A    ++        V    ++A+
Sbjct: 165 HLALSAVKQALKLDPDSAVAYYYSGQIKDRLDQLQEAVADYKQALNKDGSFVEAQLDLAD 224

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y  L       K K A +L +           + +     G    A  +     +I P 
Sbjct: 225 DYFKL------EKYKEAKKLYKK----------ILE---RNGEFKIAQTRLDRIEEIKPD 265

Query: 358 KEIFLLLAQIEQANSHNTDKILY 380
                 L + E     + ++   
Sbjct: 266 ------LFKTEAGEERSKEETRE 282


>gi|258593368|emb|CBE69707.1| exported protein of unknown function [NC10 bacterium 'Dutch
          sediment']
          Length = 99

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 5  IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRF 64
          +  F ++++++  F I      +  +T+    +++S  V++ I          L A+   
Sbjct: 6  LIGFLILAMIVAIFSI--QNSGEAVVTFIGWQFQSSLVVVILISTA-------LGAIMAI 56

Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGL 92
          FLS P      +  R   +    L   L
Sbjct: 57 FLSLPGTFRLRMRMREQAQRIAELEQQL 84


>gi|167534662|ref|XP_001749006.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772430|gb|EDQ86081.1| predicted protein [Monosiga brevicollis MX1]
          Length = 762

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 78/247 (31%), Gaps = 23/247 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
             L  Q      ++  A E     L + +    A+Y+L     R+GDL+ A     K  D
Sbjct: 428 NCLLAQ-----DKHAEAIEFYHEALAVDSGCFEALYNLGLAHRRLGDLDEALDCFLKLAD 482

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P+   V   V   Y   +++ ++  +               A+       +  +  D 
Sbjct: 483 MLPEHAEVVYQVAAVYEELEDFDQSCEWFET--LIGLVRTDPNALRHFGELYDKLE--DK 538

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IAN 297
             ++    E+ +   + I          I      KA    E+  +V P        I +
Sbjct: 539 SEAFKYHFEAFRYFPSDIATISWFGSYYIESQFIEKAIQYFERAAEVQPGQVKWRLMIGS 598

Query: 298 IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLA 351
            Y    + +  +   KR  RL     ++VE L  + +I  +           A  +A   
Sbjct: 599 CYRRTGNYQQALEVYKRTHRLF---PDNVECLKFLVRICTDMDLPEAQDFAVALKRAEQM 655

Query: 352 MKIAPRK 358
            +     
Sbjct: 656 TERKRSA 662


>gi|126737136|ref|ZP_01752871.1| TPR repeat protein [Roseobacter sp. SK209-2-6]
 gi|126721721|gb|EBA18424.1| TPR repeat protein [Roseobacter sp. SK209-2-6]
          Length = 738

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 46/140 (32%), Gaps = 8/140 (5%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             ++  +  +     +++ L    + +    A + ++  +  +A  +LE      P   +
Sbjct: 135 YQEQSQIDNAIALYKKAISLDPEHVNSLNNLANTYVNLGRISEALPLLETARAKAPQNAL 194

Query: 296 ANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                    L +           +   ++    ++   ++++    G  + A  +    +
Sbjct: 195 IAFNLGSAVLKTGQATRAKTLFEKAISLDPNLTQAHYNLAQLQSSAGEKELAIERFDAIL 254

Query: 353 KIAP---RKEIFLL--LAQI 367
           +  P   R     L  LAQI
Sbjct: 255 QENPADDRTRACRLDALAQI 274



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 17/151 (11%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           ++A     KA+ + P+       +   YV     S A+  L   +  A       A++  
Sbjct: 142 DNAIALYKKAISLDPEHVNSLNNLANTYVNLGRISEALPLLETARAKAP----QNALIAF 197

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                    G    +     +++ L  N   A    A+   S  +K  A    + I + N
Sbjct: 198 NLGSAVLKTGQATRAKTLFEKAISLDPNLTQAHYNLAQLQSSAGEKELAIERFDAILQEN 257

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           P              +   +  R   L +IN
Sbjct: 258 PA-------------DDRTRACRLDALAQIN 275



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 25/69 (36%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G    A+    KA+ + P+       + Q    A E   AI   +   +     +R 
Sbjct: 204 LKTGQATRAKTLFEKAISLDPNLTQAHYNLAQLQSSAGEKELAIERFDAILQENPADDRT 263

Query: 225 RAILLIARS 233
           RA  L A +
Sbjct: 264 RACRLDALA 272


>gi|160897672|ref|YP_001563254.1| HemY domain-containing protein [Delftia acidovorans SPH-1]
 gi|160363256|gb|ABX34869.1| HemY domain protein [Delftia acidovorans SPH-1]
          Length = 435

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   +    +  + + + +        V++ W       S  + ++I+            
Sbjct: 1   MRAALWLIGLFGMAVAAALFAGSNQGTVTLFWAPYRLDLSLNLAIAIIVLAFVLLYAALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112
                L  P        ++     + +L   L    A     ARK       
Sbjct: 61  ALAALLQMPHQARRWRSQQKERAMHHSLLEALSHQQAGRFLRARKSALAALA 112


>gi|118097266|ref|XP_414484.2| PREDICTED: similar to Tetratricopeptide repeat domain 1 [Gallus
           gallus]
          Length = 343

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                ++  A     +  +     + ++RA+L   R+     +    A+ +D  ++++L 
Sbjct: 177 QFKKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALNDCSKAVELD 236

Query: 257 DNSIMASICAAKSLISQNKKRKAE----VILEK 285
            N I A +  A+      K  +A      ILEK
Sbjct: 237 PNYIRALLRRAELHEKTEKLDEALEDYKAILEK 269


>gi|332261412|ref|XP_003279766.1| PREDICTED: tetratricopeptide repeat protein 34 [Nomascus
           leucogenys]
          Length = 566

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283
            L  R+L +     +  +  D + +LKL   +++  + +    A++LI+Q        +L
Sbjct: 214 ALCGRALVHLALDQLQEAVEDIVSALKLGPGTVVPELRSLKPEAQALITQGLYSHCRALL 273

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                     ++ +    L  ++T G L     L +IN       ++++ I +  GS ++
Sbjct: 274 S---------QLPDTGAPLEDKDTQGLLAVGEALIKINAGQPHWHLLLADILMARGSYEE 324

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT-DKIL 379
           A      A+  AP  E       + +    +      
Sbjct: 325 AGTHLEKALHPAPTSEAARARLGLLRLKKGDVPGAAR 361


>gi|302534703|ref|ZP_07287045.1| secreted protein [Streptomyces sp. C]
 gi|302443598|gb|EFL15414.1| secreted protein [Streptomyces sp. C]
          Length = 514

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 71/260 (27%), Gaps = 11/260 (4%)

Query: 105 KMHSYVSQQHTFHNEYLV-YLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSL 160
           K       +       L  +L   Q+         A   LE      + PA + + ++ L
Sbjct: 185 KAAQRAMDRLMELRPGLAAHLRAAQVYRDRGWREDAVVALEAAGGEAKSPAEKAYVLFRL 244

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +   GD   A R    AL   P          +          A+            
Sbjct: 245 GELAWERGDPAEALRQYEAALRTDPSQGEALGGRARALAALGRGGEAVRDYRLALGRTPV 304

Query: 221 WNRNRAILLIARSLENADKGDMIAS--YHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
               R  L +   L++ ++ +   +     A  +     N +   +             +
Sbjct: 305 P---RLALELGELLDSLERPEEARAQYRSLAALAAAGAANGVNEEVVLGLYEADHGDPAQ 361

Query: 279 AEVILEKIWKVNPHPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           A   L   W  +   ++A+   +           L+ A +  ++   S +     + I  
Sbjct: 362 AVRRLSAEWARHKSVQVADALGWALHKGGEDSDALEYAKKATDLGLRSADFSYHRAVIER 421

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
            +G    A      A++  P
Sbjct: 422 GLGDEAAARRSLQAALRTNP 441


>gi|283850254|ref|ZP_06367543.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
 gi|283574280|gb|EFC22251.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
          Length = 447

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 7/135 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+ +  +  D G+ + +   A + L++  NS    +    +L    K+ +A     +  K
Sbjct: 152 LMDKGRQFLDTGNPLEAARTAKQVLEMKPNSPSGLLLMGDALRGMGKREEALRAYTQAEK 211

Query: 289 VN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                  P  +IA+   H    NT  ++K   RL++++  +V+  V +    +++G +D+
Sbjct: 212 GARLFLDPLKKIAS--LHHEEGNTAEEIKFLERLDKLSPLNVDRKVDIGTGYIKLGDVDK 269

Query: 344 AHAKAMLAMKIAPRK 358
           A A    A++IA ++
Sbjct: 270 AKAAFDQAVRIATKE 284


>gi|145220212|ref|YP_001130921.1| TPR repeat-containing protein [Prosthecochloris vibrioformis DSM
           265]
 gi|145206376|gb|ABP37419.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeovibrioides
           DSM 265]
          Length = 567

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 71/250 (28%), Gaps = 29/250 (11%)

Query: 125 LEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L   IA  E  Y  A      +  L+   T       L  E         A +   + L 
Sbjct: 115 LLATIAHQEEDYLRAIAVHRELSNLERGNTELLGY--LAMEYLAAQQPAEALKVFEEILA 172

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           + P         +   +  + +  AI  + +        +R R  L           GD 
Sbjct: 173 LDPRNEMARFHSLLLEIRMERYPEAIASIRKMMGEDGGSDRLRLTLGELY----LRTGDY 228

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKK--------RKAEVILEKIWKVNPHPE 294
             +     +++      +   +      +   ++        R  +  L+ + K     E
Sbjct: 229 QKAAVTFRDAVARSPEFVPGWLALLDVSVRSGEQTVFLSDLSRYYDTSLQGLEKQL---E 285

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS---------KIALEMGSIDQAH 345
           +A  Y    + + +     A  L+ +++   ES   ++           AL     D   
Sbjct: 286 LARYYLAKAANDPLYLEPSAAMLDALSRRHPESPDPLALSGFSKLSRGAALGAAE-DFRR 344

Query: 346 AKAMLAMKIA 355
           A A+   K  
Sbjct: 345 AVAIKPEKAE 354


>gi|110626104|ref|NP_032357.2| interferon-induced protein with tetratricopeptide repeats 1 [Mus
           musculus]
 gi|13277747|gb|AAH03768.1| Interferon-induced protein with tetratricopeptide repeats 1 [Mus
           musculus]
 gi|71059781|emb|CAJ18434.1| Ifit1 [Mus musculus]
 gi|74139892|dbj|BAE31785.1| unnamed protein product [Mus musculus]
 gi|74151825|dbj|BAE29700.1| unnamed protein product [Mus musculus]
 gi|74185314|dbj|BAE30133.1| unnamed protein product [Mus musculus]
 gi|74185377|dbj|BAE30163.1| unnamed protein product [Mus musculus]
 gi|74186117|dbj|BAE34228.1| unnamed protein product [Mus musculus]
 gi|74191365|dbj|BAE30265.1| unnamed protein product [Mus musculus]
 gi|74191401|dbj|BAE30281.1| unnamed protein product [Mus musculus]
 gi|74219423|dbj|BAE29489.1| unnamed protein product [Mus musculus]
 gi|74219553|dbj|BAE29547.1| unnamed protein product [Mus musculus]
 gi|148709810|gb|EDL41756.1| interferon-induced protein with tetratricopeptide repeats 1 [Mus
           musculus]
          Length = 463

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                   +  + +L         ++  A   +E  L   + + + +        R   +
Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A     +AL  SP + ++                         +    + +  + L  
Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295

Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +R+ +   + ++      AI    E+LKL     MA +C A+     ++  +AE   +K 
Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                      +  H+  +  +    R  R  + +K+S +  + +    L++     A  
Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405

Query: 347 KAMLAMKIAPRKEIF 361
           K + A++    + + 
Sbjct: 406 KLLTALEKVAERRVC 420


>gi|116623288|ref|YP_825444.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226450|gb|ABJ85159.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 402

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 82/277 (29%), Gaps = 51/277 (18%)

Query: 85  YKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           Y+A L  G++ +   N   A  +    ++Q         YL E Q  L    Y  A E  
Sbjct: 80  YEAELNGGIVLLRQQNPAEALPLFEDAARQKPQEFRPRYYLAESQ--LQTGDYAKAEESY 137

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           ++ + + A    A   +     + G +  A+ Y  KA ++ P        +   Y    +
Sbjct: 138 KLAIGLDAKSSGAQLGMARALVQEGKVADAEVYFRKAAELEPKYREYLLQLAGLYEKGGQ 197

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            + AI    +  +N     R                                        
Sbjct: 198 TAEAIAIYREFPENGAAQARL--------------------------------------- 218

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEE 319
               + L+ + K   A   LE+ +  +P P     +A  Y      +    L    +   
Sbjct: 219 ---GELLLEERKFEDAVPRLEEAYGKDPSPGNRSALAAAYVFTRKLDKALPL--LEQCVA 273

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 ++ ++ ++   +      A  +   A K+ P
Sbjct: 274 AAPADYDTRMMYARALRDKRQFPAAARQFYEATKLKP 310


>gi|332992889|gb|AEF02944.1| hypothetical protein ambt_07055 [Alteromonas sp. SN2]
          Length = 656

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 47/172 (27%), Gaps = 8/172 (4%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL 143
           +A Y GL++      P A K+                 + +      +   +   A    
Sbjct: 213 QAAYQGLLA-KLGKFPQAAKVAQA----RLAQQPESFSIKVSLAHALVGVGELEEAIGIY 267

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +L     R     +L       GD+  A     KA   +PD      ++        +
Sbjct: 268 HSLLADKQDRPALWVALGHALKAKGDVKEAIASYEKAAAFAPDFGDAYWSLANTKTYRFD 327

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              A+  +  ++        +R  L  A      D      ++    +   L
Sbjct: 328 -DNALAVMQLQEALETTKLDDRIHLCFALGKGFEDAKQADKAFDYYAKGNSL 378


>gi|302038431|ref|YP_003798753.1| hypothetical protein NIDE3134 [Candidatus Nitrospira defluvii]
 gi|300606495|emb|CBK42828.1| protein of unknown function, TPR-like [Candidatus Nitrospira
           defluvii]
          Length = 456

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 74/243 (30%), Gaps = 17/243 (6%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+  A      A ++ +  S      N      L     LA+ + + A       +++
Sbjct: 211 KGLLDEAIGEYRAALRLQAGGSAALYSVN------LSA-ALLAKGEVDGAIGAGRTAIRL 263

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A Y+L       G++  A     + L + P    V   V Q    A E   AI 
Sbjct: 264 QPENGDAHYNLGLALKAKGEVEGALAAFREVLKLDPGQGAVHYDVGQLLERAGESDGAIA 323

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                      +         A ++     GD+  +      +L+    SI A      +
Sbjct: 324 EYRAMLA----YRPTHGPAQEALAVLLQKNGDVDGAIVAYRAALQAAPKSIAAHNNLGVA 379

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIA-----NIY-THLLSENTVGKLKRALRLEEINKE 323
           L+++ +  +A         + P   IA       +         +   +  ++L E   +
Sbjct: 380 LLTKGRIDEALTAFRTAADLQPADPIAYYNLGEAFSAQQQRGAAIQSYRSYVKLAEAQPD 439

Query: 324 SVE 326
             E
Sbjct: 440 HRE 442


>gi|281357606|ref|ZP_06244093.1| Tetratricopeptide TPR_4 protein [Victivallis vadensis ATCC BAA-548]
 gi|281315863|gb|EFA99889.1| Tetratricopeptide TPR_4 protein [Victivallis vadensis ATCC BAA-548]
          Length = 781

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 4/128 (3%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +    D  +A++   +A+  +P  P +   + +    A +   A   L    K       
Sbjct: 564 AVLKQDSAAAEKLLREAIAAAPSLPRLYLRLAEAQEAAGKNKEAAATLETGLKAIPA--- 620

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               L    +  +A   D+  +            +  +  +  ++   +  +  +A    
Sbjct: 621 -DVELAYRAARLHALADDLEPAIRLYSRIADRYPDPELIRVNLSELYAAAGRSAEALKTA 679

Query: 284 EKIWKVNP 291
           E  W   P
Sbjct: 680 ESAWLAKP 687



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 69/252 (27%), Gaps = 11/252 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A ++          +   L  LL  +  L +     A        Q   T    +
Sbjct: 464 GEFAAALELAERNRAAGGSNPGTLFQLLAAREGLGKLDEVSAEFGAARRKQPEDTALADL 523

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL--AKEWSRAITFLNQKK 215
           Y  +    R       ++ A +          V  +V +       ++ + A   L +  
Sbjct: 524 YLSFCVRNRR--AGELKQLAEELRQAKKTELKVLASVAEAESAVLKQDSAAAEKLLREAI 581

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             A    R    L +  +      G    +       LK     +  +  AA+     + 
Sbjct: 582 AAAPSLPR----LYLRLAEAQEAAGKNKEAAATLETGLKAIPADVELAYRAARLHALADD 637

Query: 276 KRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
              A  +  +I    P PE+  +     +  +  +   LK A        +   +     
Sbjct: 638 LEPAIRLYSRIADRYPDPELIRVNLSELYAAAGRSAEALKTAESAWLAKPDWPPAQESYG 697

Query: 333 KIALEMGSIDQA 344
               E G+ D+A
Sbjct: 698 IRLTETGAFDRA 709


>gi|217978468|ref|YP_002362615.1| TPR repeat-containing protein [Methylocella silvestris BL2]
 gi|217503844|gb|ACK51253.1| TPR repeat-containing protein [Methylocella silvestris BL2]
          Length = 935

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 14/214 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREF 155
             +  A   ++   +        L       I L   + + A     E +   P   +  
Sbjct: 309 GRLEDAYMAYAAALKIRPAFLPALTN--RANICLQWGRLDEAIRHCDEALRHDPKYPQAL 366

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +        R+G L  A      A+ + P AP                + A+   ++  
Sbjct: 367 GLRGAALH--RLGRLEEALVSLDLAVSVRPAAPEAWLNRGNVLQEMDRLADAVASYHEAL 424

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           + +  +       L +  +   ++GD+  +     E++    +   A    A +L+   +
Sbjct: 425 RLSPHYPE----ALSSLGVALKEQGDVDEALACFNEAIHYKPDYPDARNNRAGALLLMGR 480

Query: 276 KRKAEVILEKIWK---VNPHPEIANIYTHLLSEN 306
            ++     E  W      P P I         E+
Sbjct: 481 LKEGFRDFESRWDRSNAPPRPIIPAA-ARWTGED 513


>gi|167835380|ref|ZP_02462263.1| TPR domain protein [Burkholderia thailandensis MSMB43]
          Length = 606

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 93/261 (35%), Gaps = 11/261 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180
            +L  ++AL       A++    + +       A  +  +   +    D  +A     + 
Sbjct: 80  QVLAAEVALQRNLPAPAYQTYLALSRDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 138

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              SP +    +      VL  + + A   L Q+   A   +R +AI+ +   L  A   
Sbjct: 139 --YSPGSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDSRGQAIIALQALL--ARGP 194

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           + +       + LK   N   A    A+  ++ + K  A   L++  ++ P    A +  
Sbjct: 195 NRVGGLTVLQDLLKNDMNRPEARFAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 254

Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK---IAP 356
             +  +     +    +  + N +S +  + ++++ L    +D A  +     +     P
Sbjct: 255 SQMGPDERAAGVASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQFDAMRRNDSSDP 314

Query: 357 RKEIFLLLAQIEQANSHNTDK 377
              + + L +I+Q +  +   
Sbjct: 315 TPLMAIALIKIQQKHLDDATA 335



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 16/166 (9%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            A + +     D   +     E+L++  + + A++     L       +A  +      V
Sbjct: 218 FAIARQQLATDDKDGATQSLKEALRIKPDYLPAALM----LSQMGPDERAAGVASFEKFV 273

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             +P+     +A    +L  +      K+   +   +      L+ ++ I ++   +D A
Sbjct: 274 QQNPKSRDGRLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDA 333

Query: 345 HAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
            A     +K+A +K      + ++ LAQI   + +N      W   
Sbjct: 334 TAYLKQYVKVAQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDK 378


>gi|166714252|ref|ZP_02245459.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 900

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R RA L   R L+   +     +     E+LKLC +  +A+         Q +  ++  
Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLCADFALAANNLGFVYFRQGRFAESAR 841

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
            LE   K++P   +A +       N   + K    
Sbjct: 842 RLETTLKIDPSRAVAYLNLGDAYANAGDREKARKA 876


>gi|159467375|ref|XP_001691867.1| Paf1 complex component [Chlamydomonas reinhardtii]
 gi|158278594|gb|EDP04357.1| Paf1 complex component [Chlamydomonas reinhardtii]
          Length = 973

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 91/276 (32%), Gaps = 24/276 (8%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           ++ +  +  H    E    L  +Q A A  +Y  A    + +L    T       L   +
Sbjct: 503 RLLNNAAVLHYRAGEVATALALLQRA-AGGEYKAAAALYKEVLSEHPTYIDCYLRLACIA 561

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KE 220
              G+   A  +A  ALD           + Q Y+  +++  A   L Q  +++      
Sbjct: 562 RAKGNHKEALEFAQSALDKEGGHADALALMSQLYMERRDYEAAGKTLIQLIQDSGSKRDT 621

Query: 221 WNR---NRAILLIARSLENADKGDMIASY-HDAIESLKLCDNSIMASICAA----KSLIS 272
           + R       L  A      D+     +    A++  +   ++   ++ AA     +L  
Sbjct: 622 YGRIGYANTYLYTAPKDRKEDQLRKAEARFSKALDEYRAVLDADPRNVWAANGCGAALAE 681

Query: 273 QNKKRKAEVILEKIWKVNPHPE-----------IANIYTHLLSENTVGKLKRALRLEEIN 321
                 A+ +  +++      +           +AN             L R    +  +
Sbjct: 682 LGYLDAAQSVFSEVYASMALSDGFLTIPDVLINLANCNLARCDYQDAVHLYRTALDKLEH 741

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           K   + L+ +++   +   + +A +    A+ +AP 
Sbjct: 742 KHHPQVLLYLARALYDSNKLTEAQSCLKRAIHLAPT 777


>gi|21110817|gb|AAM39201.1| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 911

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L    K++    R RA L   R L+   +   + +     E+LKL  +  +A+   
Sbjct: 781 ATLVLPAAVKSSD---RQRAQLANERGLQLYKEKRYVDAAEQFAEALKLRPDFALAANNL 837

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGK 310
                 Q +  ++   LE   K++P   +A     + Y     +    +
Sbjct: 838 GFVYYRQGRFAESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKAR 885


>gi|82701720|ref|YP_411286.1| hypothetical protein Nmul_A0586 [Nitrosospira multiformis ATCC
           25196]
 gi|82409785|gb|ABB73894.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 573

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 79/296 (26%), Gaps = 49/296 (16%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L   L  + AL      I       + +       A               +A +    A
Sbjct: 52  LFDFLLAETALQRGDTEIGLRTYLKLAKNTQDPRVAQR----------ATEAALQARQPA 101

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENAD 238
             +     W     +    +      A   +     +    +  R  L  L+A + +  D
Sbjct: 102 FALEAAKIWTE---LDPESIP-----ARQMMAALLVHFDRLDEARPHLEKLLAVAGDKID 153

Query: 239 KGDMIASYHDAIESLKLC------------DNSIMA-------SICAAKSLISQNKKRKA 279
              M  +        K               +   A       +  A +  I+  + +KA
Sbjct: 154 DAFMQLNSLLVRSPNKNAIFELVKQLAQPYPDLPEAHFAESQAAWFAERFDIALEEMKKA 213

Query: 280 EVILEKIWKVNPHPEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
              L   W      E+A IY    L  E+    ++      +   ++ ++ +  +++ L 
Sbjct: 214 LA-LRPEW------EMAAIYEGRILSRESNARAIEFFDDYLKRYPKANDTRITYARLLLA 266

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM-PDP 392
                +A  +    +   P      +   +      N D      + AL     DP
Sbjct: 267 ERDYSKAREQFQKLLTENPDNPDVAIAVGLLSLELQNYDVAESNFKRALELGYRDP 322



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 6/135 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-- 222
              G    A +  + +L+  PD+P     ++    LA E       + Q  +   E    
Sbjct: 402 RESGAYKKAFQLLSSSLEKLPDSPE----LLYDRALAAEKIGKADIMEQDLRKLIELRPD 457

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A   +   +       +  +     +++KL                      +    
Sbjct: 458 HAHAYNALGYGIAEHSSKRLPEALELIEKAIKLSPIDPYIIDSLGWVHYRMGDINQGLSY 517

Query: 283 LEKIWKVNPHPEIAN 297
           L + + +NP PEIA 
Sbjct: 518 LRQAFAMNPDPEIAA 532


>gi|6831573|sp|Q64282|IFIT1_MOUSE RecName: Full=Interferon-induced protein with tetratricopeptide
           repeats 1; Short=IFIT-1; AltName:
           Full=Glucocorticoid-attenuated response gene 16 protein;
           Short=GARG-16; AltName: Full=Interferon-induced 56 kDa
           protein; Short=IFI-56K
 gi|1401060|gb|AAC52625.1| GARG-16 [Mus musculus]
 gi|9800619|gb|AAB33831.2| interferon-alpha regulated protein [Mus sp.]
 gi|74188226|dbj|BAE25784.1| unnamed protein product [Mus musculus]
          Length = 463

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                   +  + +L         ++  A   +E  L   + + + +        R   +
Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A     +AL  SP + ++                         +    + +  + L  
Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295

Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +R+ +   + ++      AI    E+LKL     MA +C A+     ++  +AE   +K 
Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                      +  H+  +  +    R  R  + +K+S +  + +    L++     A  
Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405

Query: 347 KAMLAMKIAPRKEIF 361
           K + A++    + + 
Sbjct: 406 KLLTALEKVAERRVC 420


>gi|116619248|ref|YP_821404.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222410|gb|ABJ81119.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 731

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 46/307 (14%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L+++A      AR+              + V  + V  A     +  +       LQ+ +
Sbjct: 346 LIALAWGAAEFARRRPGAAPAIKVLAIAFCVACVLVTWAQI-GYWQDSRTLFAHALQVTS 404

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV---------------TEAVVQ 196
               A ++L  E    G   +A     +AL I PD                   TEA+ Q
Sbjct: 405 GNYLAHHNLGVELADEGRYEAAIAEYQEALRIRPDYAQARTDLGNALLKAGGHGTEALAQ 464

Query: 197 QYVL--------------------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                                   A     A+           E+   R  L  A +   
Sbjct: 465 YRAAVESMPGSPIPHNDLGNALVKAGRLQDAVAEYQAALAIKPEYAEARNNLGKALAGIP 524

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP---- 291
              G+ +  Y  A+   ++  N   A +    +L  +  +   A    +   ++NP    
Sbjct: 525 GRGGEAVGDYQAAL---RINPNLAEAHVNLGDALAQEPGRIADAMAEYQTALRINPNLAE 581

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            H  +   ++  +                 N +  E+   +      M    +A A+   
Sbjct: 582 AHHSLGRAFSD-MPGRMADAAAEYEAALRANPDFAEAHYDLGLALSSMDRPAEALAQFEA 640

Query: 351 AMKIAPR 357
           A+K+ P 
Sbjct: 641 ALKMRPD 647


>gi|145588689|ref|YP_001155286.1| hypothetical protein Pnuc_0502 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047095|gb|ABP33722.1| Tetratricopeptide domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 403

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 87/270 (32%), Gaps = 22/270 (8%)

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102
           +  S L      + + +  SR+ L     +      R     +K L   L++        
Sbjct: 4   IATSWLLLLPIMFGIGWLASRWDLRLENRMDERERMRQQRSTFKGLSL-LLNEQPDQAIE 62

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF----AVY 158
                + +  +    +  L  L   +      +   A    + +      +      A Y
Sbjct: 63  TLVKIAQLDPETIELHFSLGNLFRRR-----GETERAIRVHQHLANRDDLKLRDRDHAAY 117

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-ITFLNQKKKN 217
            L  +  R G L+ A+    +  D     P   E++++ Y + ++W +A I     +   
Sbjct: 118 ELGRDFLRAGLLDRAEASLNRVGDGKYAVP-AKESLLEMYQVERDWKKAIIAATELESLQ 176

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            K  +   A        +   + D++        +L+   N   A I      ++  +  
Sbjct: 177 GKSHHTEIAQFHCELGQDALRRKDLVEVEQSIQRALQAVPNHARALILQGDYFMATERPA 236

Query: 278 KAEVILEKIWK--VNPHPEIANIYTHLLSE 305
           +A     + W    + HP     Y HLL++
Sbjct: 237 QA----IEAWSVIASLHP----AYMHLLAD 258


>gi|77748781|ref|NP_644665.2| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 900

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L    K++    R RA L   R L+   +   + +     E+LKL  +  +A+   
Sbjct: 770 ATLVLPAAVKSSD---RQRAQLANERGLQLYKEKRYVDAAEQFAEALKLRPDFALAANNL 826

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGK 310
                 Q +  ++   LE   K++P   +A     + Y     +    +
Sbjct: 827 GFVYYRQGRFAESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKAR 874


>gi|124004030|ref|ZP_01688877.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123990609|gb|EAY30089.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 603

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 130 ALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           AL   ++  A         L+      +        + + G+L+ A    +KA+ I+P+ 
Sbjct: 289 ALLNEKWQEAISAYTKCVHLKSDHYMAYGHRG--RANRKAGNLDQAIADFSKAIKINPEY 346

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W   +     V+AK+++ A+   ++       +    A     R+      G    +  
Sbjct: 347 DWAYASRGYAKVVAKKYTEALLDFDKAIALKPSYRWAYAH----RARTKYYLGRYKNAIE 402

Query: 248 DAIESLKLCDN 258
           D   +LK+  N
Sbjct: 403 DYNNALKIDPN 413


>gi|73667829|ref|YP_303844.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72394991|gb|AAZ69264.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1013

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 25/216 (11%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMML 147
            GL+         A K       +   H+       +++    +  ++++ A   LE + 
Sbjct: 605 KGLVFAHCGEWGKALK----AFDRILTHDPKNTQASVMKAFALIRLQEFDKAISVLEELT 660

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                 +     L F   R+ D   A +   KA+DI+P        + + Y    +   A
Sbjct: 661 TDEINSDLPSCLLGFACFRLEDFERALKAYRKAIDINPKNSHARNGLSELYFRLGDSRGA 720

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-------SI 260
           +  L      A E + +R +    +     ++     +      +L L           +
Sbjct: 721 LKELEASIAEAPENSFSRNL----KGRVELEEQACEEALESFRRALALDSEDQRLLLWDV 776

Query: 261 MASICAAKSLISQNKKR------KAEVILEKI--WK 288
            A    A++   +N  R       A   LEK   W+
Sbjct: 777 YARYMYAEASFEENSARFRHMLLAAAGKLEKAAIWQ 812


>gi|56475450|ref|YP_157039.1| hypothetical protein ebA36 [Aromatoleum aromaticum EbN1]
 gi|56311493|emb|CAI06138.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 928

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 39/303 (12%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           + + +   A  +    +  H       + +L  +  LA      A   L  + ++ +   
Sbjct: 588 LGSKDPKKALLIAQEAAAGHA-DQPQAISML-ARAQLAAGDQQQAVSSLNKLSELVSQSP 645

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---- 210
            ++  +        D   A+R   +AL+  PD     + +       K    A+      
Sbjct: 646 PSLAEVADMQRFAKDRAGAERSLRRALEHKPDMFEAQQRLASLLAEDKRTDEALKISATV 705

Query: 211 -----------LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                      L + + +A   N   A+    ++LE        A  H A        ++
Sbjct: 706 QKQRPKAAAGPLLEGQIHAASANWEPAVQAYRKALELEALAQTAAKLHAAQVLAGKAPDA 765

Query: 260 IMASI---------------CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL- 303
              +                 A ++L  + +  +AE +  K+ +++  P+ A +  +L  
Sbjct: 766 AKTAADWLRTHPKDVVLRSYLAGRALAER-RLDEAEKLFHKVDELS--PDNAQVLNNLAW 822

Query: 304 ---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                     L  A R  ++   +   L  +  + +E G  D+       A+ ++P   +
Sbjct: 823 IAGQRKDPEALALAERALKLAPNNPAILDTLGTLQVERGQRDEGLENLRKAVGLSPGAGV 882

Query: 361 FLL 363
             L
Sbjct: 883 LRL 885



 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 29/304 (9%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDL 170
                 + L   +     +A      A   L+ +L      +    +          GDL
Sbjct: 331 LARAPKQPLARRMLAMSLMASGDQGRALTTLQPLLDASSVDSATMGLAG--RIHVANGDL 388

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A  Y  K   + P+       +    +L  + S A   L        +      I+++
Sbjct: 389 DRAAEYFAKVAAVEPENAMARTRLGVSKLLGGDASEAFADLEAASDLESDTGHADVIMIL 448

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A        G++  +     +      N+    +     L+++     A +  EK  ++N
Sbjct: 449 AY----LRSGELDKAMAAQRQLEAKQPNNPQTHVLKGGILLARKDAAGARLAFEKALELN 504

Query: 291 PHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA--- 344
           P    A        +  +      KR  ++   N ++VE+ ++++ +     +       
Sbjct: 505 PDSVAAAANLARMDIGEKRPDDARKRFEKIVATNPKNVEAHLLLADLLARTEAKPAEVVS 564

Query: 345 ---HAKAMLAMKIAPRKEI------------FLLLAQIEQANSHNTDKILYWTQSALHAM 389
               A       +AP+  +             LL+AQ   A   +  + +     A  A 
Sbjct: 565 MLKRAAGANPAALAPKLALVRYYLGSKDPKKALLIAQEAAAGHADQPQAISMLARAQLAA 624

Query: 390 PDPL 393
            D  
Sbjct: 625 GDQQ 628



 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 87/300 (29%), Gaps = 41/300 (13%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-------------------- 168
              A+     A    E       +   A   L       G                    
Sbjct: 143 AHFAKGDLEKARAAYEAAAVADPSSGSARAGLAQVKLSAGELDGALADADAAIAADPGAA 202

Query: 169 --------------DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
                         D+  A     +A+   P A     A+V   +       A+  L   
Sbjct: 203 DAHAVRADVLLMRKDIPGAAAALEEAIKARPKAVNYHFALVSMLLRENRVDEAMPHLEAM 262

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           KK+A +    R +    ++L +     +  +  +  E+++L  + + A + A    I  N
Sbjct: 263 KKSAPQHPSTRYL----QALVDLRNNRIEEARDNVTEAVRLAPDYLPARLLAGAIHIRLN 318

Query: 275 KKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +   A+  L  +    P   +A      + + S +    L     L + +     ++ + 
Sbjct: 319 QHVLAQEHLGVVLARAPKQPLARRMLAMSLMASGDQGRALTTLQPLLDASSVDSATMGLA 378

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            +I +  G +D+A         + P   +      + +    +  +     ++A     D
Sbjct: 379 GRIHVANGDLDRAAEYFAKVAAVEPENAMARTRLGVSKLLGGDASEAFADLEAASDLESD 438



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 3/167 (1%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A   P A K  +      T   + ++       ALAER+ + A +    + ++       
Sbjct: 759 AGKAPDAAK--TAADWLRTHPKDVVLRSYLAGRALAERRLDEAEKLFHKVDELSPDNAQV 816

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + +L + + +  D   A   A +AL ++P+ P + + +    V   +    +  L +   
Sbjct: 817 LNNLAWIAGQRKDPE-ALALAERALKLAPNNPAILDTLGTLQVERGQRDEGLENLRKAVG 875

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            +      R  L  A    +          +   ++         A+
Sbjct: 876 LSPGAGVLRLNLAKAYLKADRKDDARKELDNLLGQAPAGSPLHAEAT 922


>gi|331018124|gb|EGH98180.1| TPR domain protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 575

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 89/275 (32%), Gaps = 39/275 (14%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
             +F  + LV LL  ++A    +++IA +              +  + Y  +  +G   S
Sbjct: 45  YGSFSQDTLVSLLSAELAGQRNRFDIALDNYVTQAVKTQDPGVSERA-YQIAEYMGADQS 103

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---------- 222
           A   A      +P       A   Q   A  +  ++ ++ +  +   + +          
Sbjct: 104 ALETALIWARNAPSDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAAE 163

Query: 223 --------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
                                    L+  ++L     GD   S    +E     +  I  
Sbjct: 164 TDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAP 222

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALRL 317
            +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   L
Sbjct: 223 ILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAAL 280

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   +  E    ++ + LE  + ++A       +
Sbjct: 281 VQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 315



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            K+      Q    ++ L + L   + L  + +  A   LE ++   A  + A  +L   
Sbjct: 273 AKVQFAALVQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 331

Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                D  SA   YA   +   PD            V     + A   L++ +    ++ 
Sbjct: 332 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 389

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L +  +        +   +    ++LK   +        A     +N   + E  
Sbjct: 390 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 446

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338
           L  I K  P   +A         +   +   A  L E       +    L  +  +   +
Sbjct: 447 LRTIIKREPENAMALNALGYTLSDRTTRYTEARELIEKAHQISPDDPAVLDSLGWVNYRL 506

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           G++D A      A++  P  E+   L ++  A   +  +       AL   PD
Sbjct: 507 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 558


>gi|241666982|ref|YP_002985066.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240862439|gb|ACS60104.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 354

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149
           G++  AA +   A     Y+     +      +     +     + + A       +   
Sbjct: 126 GVILKAAGDSTAAE--ARYLDAVRLWPQYPEAHYNLAILLEETDRPDEAAAHYRQALKCR 183

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P   +  +  L     + GD   A+ +  +AL + P                 E   A +
Sbjct: 184 PDYVDALLR-LAGVFDKWGDRFEARHHFQEALRLRPGFAEAHNNFGVFLEKHGEAEEAES 242

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              Q  +   +++          ++   +  D+ A+      +L+       A    A  
Sbjct: 243 QYRQALQVRSDYSE----AHYNYAM-LLEGRDVEAAELHYRAALRSAPEYAEAHNNLAVL 297

Query: 270 LISQNKKRKA 279
           L  +     A
Sbjct: 298 LHEKGALSDA 307



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 70/221 (31%), Gaps = 19/221 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD  +A+     A+ + P  P     +            A     Q  K   ++   
Sbjct: 130 KAAGDSTAAEARYLDAVRLWPQYPEAHYNLAILLEETDRPDEAAAHYRQALKCRPDY--- 186

Query: 225 RAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             +  + R     DK GD   + H   E+L+L      A       L    +  +AE   
Sbjct: 187 --VDALLRLAGVFDKWGDRFEARHHFQEALRLRPGFAEAHNNFGVFLEKHGEAEEAESQY 244

Query: 284 EKIWKV-----NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  +V       H   A +              RA        E  E+   ++ +  E 
Sbjct: 245 RQALQVRSDYSEAHYNYAML-LEGRDVEAAELHYRAA--LRSAPEYAEAHNNLAVLLHEK 301

Query: 339 GSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHN 374
           G++  A +  + A+++ P      + +  LLA + +    +
Sbjct: 302 GALSDAKSHYLSAIRLRPVDPQTYRNLSFLLAAMGEEEQAD 342


>gi|190348750|gb|EDK41270.2| hypothetical protein PGUG_05368 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 636

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 53  FAWILLFAVSRFFLSCPAMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSY 109
             W+ +        + P        K      + GY  +  G     A +    + M +Y
Sbjct: 364 VTWLAIGTYYLSVNNLPEA-RKFFSKATLLDPNHGYAWI--GFGHTFAADGEHEQAMSAY 420

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
                 +   +L +L           +++A E L+   QI AT    +  L        +
Sbjct: 421 AFAARLYPGTHLPHLFLGMQHFLMNNFSLAQEYLQSSYQICATDPLLLNELGVVCFHRNN 480

Query: 170 LNSAQRYATKALDISPDA-----PWVT-EAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222
           L+ AQ Y  +AL  +         W++    +   +  +K+  +A+    Q  +     +
Sbjct: 481 LSRAQAYFEEALAAAKHLNADSKAWISIHTNLGHTFRRSKQLEKALECFQQVLR---LSH 537

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           ++ A +L A  L +   G+   +      SL +  ++ +A+    ++L
Sbjct: 538 KDDASILAAVGLVHLKLGNASMAVESLHNSLAISPSNPIANDLLKRAL 585


>gi|119509153|ref|ZP_01628304.1| TPR repeat protein [Nodularia spumigena CCY9414]
 gi|119466319|gb|EAW47205.1| TPR repeat protein [Nodularia spumigena CCY9414]
          Length = 226

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 11/200 (5%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMM 146
           L  G  +++  ++  A+ + +  +      N  L  L E  Q  +A   YN A    +  
Sbjct: 12  LSLGFSAVSIPSVAQAQVLMAQTT------NPQLKRLFEEGQRLVAANDYNGAIAIYQQA 65

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            QI          + +   + G+   A     +A+ I  +      AV    V   +   
Sbjct: 66  AQIEPRNARIHSGIGYLYAQQGNFPPALASYRRAIAIDANNSDFHYAVGYIKVNMGDTKG 125

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A     +  +     NRN     +   +  A  GD  A+     +++KL  N+       
Sbjct: 126 AKESYRRAIQ----LNRNHLNAYLGLGITQARMGDFTAANWAYEQAIKLAPNNAQTYEFM 181

Query: 267 AKSLISQNKKRKAEVILEKI 286
           A     + +  KA  +L+K 
Sbjct: 182 ALMYKQRRQTAKANNLLKKA 201


>gi|330887867|gb|EGH20528.1| TPR domain-containing protein [Pseudomonas syringae pv. mori str.
           301020]
          Length = 423

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 74  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 246

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|113476523|ref|YP_722584.1| hypothetical protein Tery_2947 [Trichodesmium erythraeum IMS101]
 gi|110167571|gb|ABG52111.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 321

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 23/130 (17%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G+L +A  +  +AL I P+ P + +     Y   K+W  AI +  +  K         +
Sbjct: 50  QGNLEAAMSWYAQALKIQPNNPELYKITGNLYSRKKQWDEAIAYYEKAIKLEP------S 103

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  +   L +  K     +   A+ + +                 S   +     ILE  
Sbjct: 104 LTEVYEKLGHIFKQRYQENLQAALNNYRQA------------IEYSPGDESNYYKILE-- 149

Query: 287 WKVNP-HPEI 295
             + P HPEI
Sbjct: 150 --IQPYHPEI 157


>gi|172035397|ref|YP_001801898.1| hypothetical protein cce_0481 [Cyanothece sp. ATCC 51142]
 gi|171696851|gb|ACB49832.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 252

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 13/178 (7%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                 +  A+   NQ                  R    +  G    +  D  + LKL  
Sbjct: 73  KSRQGNYEAAVDDFNQVLAQNP----QDINAYFNRGFAYSSLGQFEQALADFTKVLKLDP 128

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRA 314
             + A +      +   +  KA    EK  K+NP+   A       HL S +        
Sbjct: 129 QMVQAYVNRGNVYLQLGEDEKAISDYEKALKINPNDAFAQNNLGLAHLNSGSPELAKIDF 188

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-----APRKEIFLLLAQI 367
            +   I+    E+        L++G   +A A    A +I             L A+I
Sbjct: 189 TQAVTIDPLYGEAYYNRGLALLDLGETKKAIADFQKAAEIWEEMGEQTASEAAL-AEI 245


>gi|170734144|ref|YP_001766091.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169817386|gb|ACA91969.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia
           MC0-3]
          Length = 607

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 85/223 (38%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A  + D    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 169 ARELARASGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D  D   +     ++L+L  + + A++     L       +A  I      V  +
Sbjct: 224 QQLAVDDKD--GAAQSLKQALQLRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D+A   
Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDEATGY 337

Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++      + ++ LAQI    +++  +   W   
Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 10/154 (6%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +   A      +L      D +++ +   +      +S  AS   A  L+   K 
Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161

Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             A+ +L +           P   +A     +   + VG L     + + +    E+ + 
Sbjct: 162 ADAQPMLARELARASGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLA 220

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +++  L +   D A      A+++ P      L+
Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQLRPDYLPAALM 254


>gi|120610109|ref|YP_969787.1| type IV pilus biogenesis/stability protein PilW [Acidovorax
           citrulli AAC00-1]
 gi|120588573|gb|ABM32013.1| type IV pilus biogenesis/stability protein PilW [Acidovorax
           citrulli AAC00-1]
          Length = 280

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 4/124 (3%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L F   R+GD  SA     +ALDI+P  P++           K ++ A  F ++   
Sbjct: 101 LRGLVF--MRLGDWPSADDSFRRALDINPQEPYLLHNYGWLRCQQKNYAEAGRFFDRAL- 157

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A      RA  L+ + L     G +  +     ++ +L   + +     A     +   
Sbjct: 158 -AVPSYTARAKTLMTQGLCQERAGQVAEAEKTLAKAYELDAGNPVVGYNLASLAFRRGDA 216

Query: 277 RKAE 280
           ++A+
Sbjct: 217 KRAQ 220


>gi|110833213|ref|YP_692072.1| hypothetical protein ABO_0352 [Alcanivorax borkumensis SK2]
 gi|110646324|emb|CAL15800.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 153

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 8/120 (6%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
            + Q    +  L  L   + A  +   + A   LE  L I     +    L       GD
Sbjct: 34  SASQELEGSPALSLLASAEQARQQGNSSRAERYLERALNIAPDSSWLYKELADLRLTEGD 93

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A+ +A KAL ++P+ P     + +    A++         Q      +  R RA +L
Sbjct: 94  ARGAEGFALKALRLAPEHPEYQAGLWELVATARD--------RQGDAGGAKAARERAAVL 145



 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++ + G+ + A+RY  +AL+I+PD+ W+ + +    +   +   A  F  +  + A E  
Sbjct: 53  QARQQGNSSRAERYLERALNIAPDSSWLYKELADLRLTEGDARGAEGFALKALRLAPEHP 112

Query: 223 RNRAIL--LIARSLENA-DKGDMIASYHDA 249
             +A L  L+A + +   D G   A+   A
Sbjct: 113 EYQAGLWELVATARDRQGDAGGAKAARERA 142


>gi|15805161|ref|NP_293847.1| hypothetical protein DR_0121 [Deinococcus radiodurans R1]
 gi|6457788|gb|AAF09713.1|AE001874_10 hypothetical protein DR_0121 [Deinococcus radiodurans R1]
          Length = 449

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 56/199 (28%), Gaps = 27/199 (13%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILL 229
           A   A  A+  +P+ P V     Q Y     W +A +        A      N  RA   
Sbjct: 136 AADRAEAAVSAAPNNPDVLRLRAQIYTEVGFWKQAESSWRAYFAVAPVAAGQNEARAAGN 195

Query: 230 IARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +  +L  A   +G    +       L L   S+  +  AA++ +       A+ +  +  
Sbjct: 196 VQYNLGYAAYTRGQSAQAAAYFKACLTLDPQSVPCATWAARTALESGDYALAQNLYTQAL 255

Query: 288 KVNPH----------------------PEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            + P                          +  Y  L +      L              
Sbjct: 256 SLAPTDKTLNYFAQVARNASTYGPAATQAFSRAYASLDAGRRAEALAGFQEAARSAPNFP 315

Query: 326 ESLVIVSKIALEMGSIDQA 344
           E+     ++ALE G    A
Sbjct: 316 EAQREAGRLALEAGDTGAA 334


>gi|16079316|ref|NP_390140.1| hypothetical protein BSU22590 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|1730922|sp|P54389|YPIA_BACSU RecName: Full=TPR repeat-containing protein ypiA
 gi|1146224|gb|AAB38432.1| putative [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634677|emb|CAB14175.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 423

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 87/248 (35%), Gaps = 16/248 (6%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC-RIGD 169
            +    NE ++     ++  A+  Y  A +  +   +         V+    ES    G+
Sbjct: 127 AKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESLSASGE 186

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A  +  KA+D +PD       +      A + +  +    ++  + KE + +   L 
Sbjct: 187 FEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPSYTSLY 241

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  S     +G    +   A E ++  + +    + AAK  +   K  + + +L++   +
Sbjct: 242 MPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALAL 301

Query: 290 NP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +P      H  +A    +   E+    +     +    +E  +    ++    E+   ++
Sbjct: 302 DPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEE 358

Query: 344 AHAKAMLA 351
           A      A
Sbjct: 359 AKQSFEAA 366



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 5/127 (3%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            LI  +++  + G+     +   ++ K   +   A   AA+         KA  ++  + 
Sbjct: 3   TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLYYEWGDVEKAISLISDLH 60

Query: 288 KVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            + P+  E+ N Y  LL +       L     + E +    ESL++++ +    G  + +
Sbjct: 61  DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS 120

Query: 345 HAKAMLA 351
             K   A
Sbjct: 121 EQKLFQA 127


>gi|326798562|ref|YP_004316381.1| Tetratricopeptide TPR_2 repeat-containing protein [Sphingobacterium
           sp. 21]
 gi|326549326|gb|ADZ77711.1| Tetratricopeptide TPR_2 repeat-containing protein [Sphingobacterium
           sp. 21]
          Length = 570

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 18/162 (11%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              ++A   L  +L++  + + A + L        +L  A  +A KA  + PD  W    
Sbjct: 46  GDIDLAQTTLHKLLKLDDSNDAAYFELARLELEDKNLGDAAIHAKKATTLKPDNEWYWVL 105

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIARSLENADKGDMIASYHD 248
           +   Y   ++++      +Q  +   E     ++R  A+ L      N +    + +YH+
Sbjct: 106 LADIYKRMEDFNSLPPIFDQLIRIKPEKKEYFYDRAYALFL------NNELDKSLQAYHE 159

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKI 286
             +     DN I   I   +  + Q + +KA      I+EK 
Sbjct: 160 IEQKFGKDDNII---IARQEIYLKQKQPKKAIEEVTSIIEKE 198


>gi|256000745|ref|NP_001157675.1| plectin isoform 1hij [Mus musculus]
 gi|256000747|ref|NP_958789.3| plectin isoform 1hij [Mus musculus]
 gi|256355107|ref|NP_958794.2| plectin isoform 1hij [Mus musculus]
 gi|256367522|ref|NP_958790.2| plectin isoform 1hij [Mus musculus]
          Length = 4386

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 101  PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  + V  Q       E L +L +   A  + +           M      R   +
Sbjct: 1240 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1299

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211
                 E  R    G+L + +  A +A      A    E +   VQ     K  + A   L
Sbjct: 1300 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1359

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              K +      + RA+  +      A++ +      +A  +
Sbjct: 1360 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1400


>gi|196233160|ref|ZP_03132007.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196222804|gb|EDY17327.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 566

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 11/203 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    GDL +A+    + L  +         +    +       A   L Q    A 
Sbjct: 12  LAVQYHGSGDLAAAEAICRQILAAASGHAEAWHLLGVCLLSTGRHEEARECLAQAAALAP 71

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                R        + +   G    +      +L++      A    + +L+   +  +A
Sbjct: 72  SVACMR----CDLGVVHRFLGQHEEAVRCFERALQIDPEYAPAWTNLSDTLLRVGRLDEA 127

Query: 280 EVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKI 334
               ++   V   P++A  +++L +           +   LR   IN + + +   ++  
Sbjct: 128 ISSGQRA--VAAQPDLAEAHSNLGNALRDKGRLDEAIHHFLRALAINPQFIAAYNNLAHA 185

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
            +E   +D A A    A+   P 
Sbjct: 186 YIEADRLDDAIASCDRALGRQPT 208



 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 68/225 (30%), Gaps = 28/225 (12%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSY--VSQQHTFHNEYLVYLLEVQIALAE---------- 133
           +A+   +++ A+ +      +      + +H    E L      Q A             
Sbjct: 26  EAICRQILAAASGHAEAWHLLGVCLLSTGRHEEARECL-----AQAAALAPSVACMRCDL 80

Query: 134 -------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                   Q+  A    E  LQI      A  +L     R+G L+ A     +A+   PD
Sbjct: 81  GVVHRFLGQHEEAVRCFERALQIDPEYAPAWTNLSDTLLRVGRLDEAISSGQRAVAAQPD 140

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +            AI    +      ++    A   +A +   AD+ D   + 
Sbjct: 141 LAEAHSNLGNALRDKGRLDEAIHHFLRALAINPQF--IAAYNNLAHAYIEADRLDDAIAS 198

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            D   +L        A +    + + +++  +AE    +     P
Sbjct: 199 CD--RALGRQPTFAKAWLNRGTAYMGKDEVGEAEQSFRRALACQP 241


>gi|134277901|ref|ZP_01764616.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
 gi|134251551|gb|EBA51630.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
          Length = 614

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|154341523|ref|XP_001566713.1| CDC16 [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064038|emb|CAM40229.1| putative CDC16 [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 546

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 63/191 (32%), Gaps = 22/191 (11%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            LA++M         +     V+LL V+ A          +    ++   +++  A+  +
Sbjct: 59  KLAKQMT------FAYDQNSEVFLLAVKAAFELGDLKTCVQHAMTLINADSSKVVAMCFV 112

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +   GD   A  +   AL+  P       A+ ++++L   W   I  L    +   E
Sbjct: 113 AKAAELSGDPAKAVHFYKMALEADPFCGEAFSALTERHLLD-HWE--ILELIDSLRIPPE 169

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
               R+ L      +    G         + +              AK    +N  R+A 
Sbjct: 170 IEVYRSSLKARIGCDYITSGISGVPRTLVLLA-------------GAKKEYERNNLRQAL 216

Query: 281 VILEKIWKVNP 291
            +  +I ++ P
Sbjct: 217 SLTTEILEMEP 227


>gi|159045614|ref|YP_001534408.1| TPR domain-containing protein [Dinoroseobacter shibae DFL 12]
 gi|157913374|gb|ABV94807.1| TPR domain protein [Dinoroseobacter shibae DFL 12]
          Length = 584

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 102/340 (30%), Gaps = 80/340 (23%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN------------------ 171
           AL   +   A    + M+  P TR F +Y       ++GD                    
Sbjct: 159 ALDRGRPAEALAAFDEMIDDPRTRAFGIYHKAMALAQVGDFEGADALFLEDGSIAASLSG 218

Query: 172 ----------SAQRYATKALDI------------------------------SPDAPWVT 191
                     +    A +A  +                               P A +  
Sbjct: 219 RAIIAHAQVLAQLDRADEARTLIETRIGADDPRGAAILDALDAGTLVFDVVPDPAAGYAE 278

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                   L  + + A T L  +           A+LL A  LE+ ++ D   +     +
Sbjct: 279 TFFTVAIALNGQAADAFTLLYARLAQILAPEHIDALLLTASLLEDLEQFD--LANQVYDK 336

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
             +     + A I  A  L    K   A  +L +   V  H ++A ++  L   +T  ++
Sbjct: 337 VPRDSPAFLTAEIGRANVLREAGKADAAIEVLTQ--LVETHGDVARVHAALA--DTHRRM 392

Query: 312 KRALRLEEI-----------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +      E             ++              +G  D+A      A+++ P + +
Sbjct: 393 ENFAEAAEAYDAAIAIAEAQGQDDWVLYYARGIAHERIGDWDEAEVDLRRALELNPGQPM 452

Query: 361 ---FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
              +L  + +E   + +    +   + A+ A PD  +I+D
Sbjct: 453 VLNYLGYSFVEMGENMDEALAM--IEEAVAARPDNGYITD 490


>gi|78045823|ref|YP_361998.1| hypothetical protein XCV0267 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034253|emb|CAJ21898.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 837

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L  +    G   +A  +  KA+DI P         V+ +    ++ +A   L   ++ 
Sbjct: 418 YALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKKATETLRVAEQF 477

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   A+ + +  ++     D   +    I+  +L  +   A   AA  L   N+  
Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADFWIQMAELYPDYAPAQANAAMDLFVANRFA 534

Query: 278 KA 279
            A
Sbjct: 535 DA 536


>gi|56752875|gb|AAW24649.1| SJCHGC09396 protein [Schistosoma japonicum]
          Length = 472

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 49/221 (22%)

Query: 160 LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           L     R   GD+ +A+    +A + +P++  +  A V+     KE++RA   L++   +
Sbjct: 131 LMAAKTRWLAGDVPAARSILARAFEANPNSEEIWLAAVKLESENKEYARARRLLDKACAS 190

Query: 218 AKEWNRNRAILLIA-------RSLENADKGDM---------------------------- 242
           A           +        ++L+  +K                               
Sbjct: 191 ASTARVWMKAARLEWCLGELDKALQMLEKATSMYHQAPKLWLMLSQIYEQMSVGEGLKLN 250

Query: 243 ------IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
                   + +   + L    +     +  A+         KA  ILEK    NP  PE+
Sbjct: 251 EVESLKERARNTYRDGLNHNPHYTALWLQLARFEERHGNLTKARSILEKARSQNPKTPEL 310

Query: 296 ANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIVSKI 334
              +   +      +LK      L +  +E   S  + ++ 
Sbjct: 311 ---WLEAIKLEVRAQLKPVADSLLSKALQECPTSGCLWAEA 348


>gi|315127012|ref|YP_004069015.1| TPR motif protein [Pseudoalteromonas sp. SM9913]
 gi|315015526|gb|ADT68864.1| TPR motif protein [Pseudoalteromonas sp. SM9913]
          Length = 552

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 70/173 (40%), Gaps = 16/173 (9%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           +  +A  ++ +A   L+ ML+   TR  A+  L     ++     AQ + ++A  I+P  
Sbjct: 216 EALIANNEHILAQRMLKTMLERNETRLVALDLLGRLEIKLNQFELAQEFLSQAAHIAPRN 275

Query: 188 PWVTEAVVQQYVLAKEWS------RAITFLNQKKKNAKE---WNRNRAILLIARSLENAD 238
               +++    ++ +++       + I    +   +       N  RA +  A + +  D
Sbjct: 276 IDRQKSLNSVSLINRDYETSYLTQKDIATFAKYSMHDSPDIYLNAARAGIDFALTTDQTD 335

Query: 239 KGDMIASYHDAIESLKLCDNSIMAS------ICAAKSLISQNKKRKAEVILEK 285
           + + I S        +L      ++      +  A+    +++ +KA+ ++E+
Sbjct: 336 QINRI-SRQTNKYINELKTQFPTSNAQTQIDVLNARLYYLKDEHKKAKQLIEQ 387


>gi|308501583|ref|XP_003112976.1| CRE-OGT-1 protein [Caenorhabditis remanei]
 gi|308265277|gb|EFP09230.1| CRE-OGT-1 protein [Caenorhabditis remanei]
          Length = 1255

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 4/138 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + +   A       L+I      A  +L     + G L  A  +  +A+ ISP       
Sbjct: 530 QGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAILHYKEAIRISPTFADAYS 589

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        + S AI   N+  +    +    A      +  + D G+M  +      +
Sbjct: 590 NMGNTLKEMGDSSAAIACYNRAIQINPAF----ADAHSNLASIHKDAGNMAEAIQSYSTA 645

Query: 253 LKLCDNSIMASICAAKSL 270
           LKL      A    A  L
Sbjct: 646 LKLKPEFPDAFCNLAHCL 663



 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 45/157 (28%), Gaps = 11/157 (7%)

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             + P        +        +   A     +  +   E+    A      +     +G
Sbjct: 510 FQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF----AAAHSNLASILQQQG 565

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEI 295
            +  +     E++++      A      +L        A     +  ++NP     H  +
Sbjct: 566 KLQDAILHYKEAIRISPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAHSNL 625

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           A+I+      N    ++      ++  E  ++   ++
Sbjct: 626 ASIHKDA--GNMAEAIQSYSTALKLKPEFPDAFCNLA 660


>gi|239993161|ref|ZP_04713685.1| TPR domain protein [Alteromonas macleodii ATCC 27126]
          Length = 385

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 19/189 (10%)

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL----- 270
           +NA   N+  A+    +  +         +Y     + K+  +   + +           
Sbjct: 190 RNAVSKNKVIAMYYNNKGADALVANSYTRAYSYFRAAAKVAPDLQQSWVNLGVLYRMVDE 249

Query: 271 ISQNKK--RKAEVILE---KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
             Q++   + A  + E     W+      ++ +YT+   ++    LK    +E   K + 
Sbjct: 250 YEQSEMTYKHALSLNEENLTAWEN-----LSILYTYQDRDDEA--LKITQMVEAKRKHNP 302

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQS 384
               I+ + ALE G I  A       +++   +  I   +A+       +  +   + + 
Sbjct: 303 YYHYILGEQALEAGDIALAIVHYERGLRLDNARHEILFGMAK-AYHELGDVSEAQRYLER 361

Query: 385 ALHAMPDPL 393
           A+   P+  
Sbjct: 362 AVRYSPNEQ 370



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A K+   V  +   HN Y  Y+L  Q         +A    E  L++   R   ++ +  
Sbjct: 287 ALKITQMVEAKR-KHNPYYHYILGEQALE-AGDIALAIVHYERGLRLDNARHEILFGMAK 344

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVT 191
               +GD++ AQRY  +A+  SP+     
Sbjct: 345 AYHELGDVSEAQRYLERAVRYSPNEQEKQ 373


>gi|194042608|ref|XP_001926697.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Sus
           scrofa]
          Length = 858

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 154 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDVKNAELALFELSRVITLEPDR 213

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 214 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 266

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 267 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 325

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 326 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQLEPYNE 383

Query: 360 IFLLL 364
           +   +
Sbjct: 384 VCQYM 388


>gi|167720693|ref|ZP_02403929.1| TPR domain protein [Burkholderia pseudomallei DM98]
          Length = 366

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|164660640|ref|XP_001731443.1| hypothetical protein MGL_1626 [Malassezia globosa CBS 7966]
 gi|159105343|gb|EDP44229.1| hypothetical protein MGL_1626 [Malassezia globosa CBS 7966]
          Length = 813

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 29/263 (11%)

Query: 103 ARKMHSYVSQQHTFHNEY--LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           A    + +++ H  H+    L  +LE + A+ E     A +               +   
Sbjct: 515 ANPYMANMTRNHAAHSPPGMLDTVLEHEAAVQE-DPKDASKWYN----------LGLR-- 561

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E+ R     +A     +AL I P       A+   Y    +   A+  L++  K   +
Sbjct: 562 QQENERETQAIAALH---EALKIDPAMKEAWLALAVSYTNENDRDEALEALDRWIKVNDK 618

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKK 276
           +         AR  +  D+   +A+   A+   +  D S        +       +  + 
Sbjct: 619 YQAVVQSYQQARGRQGQDRHRQLANMLLAMARSRAQDISEPVDADVQVAMGVLFNASGEY 678

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331
            KA         V   P+   +Y  +      S  +   L+   +   +  +       +
Sbjct: 679 SKAVDCFTTALHVR--PDDWILYNRIGATLSNSGRSEESLQYYQQALTLRPDFARCHFNL 736

Query: 332 SKIALEMGSIDQAHAKAMLAMKI 354
           S   L +    +A   A  A+ +
Sbjct: 737 SISCLNLKMYTEAAEHAYTALTL 759


>gi|126442191|ref|YP_001059924.1| TPR repeat-containing protein [Burkholderia pseudomallei 668]
 gi|126221684|gb|ABN85190.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668]
          Length = 614

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|254786617|ref|YP_003074046.1| type IV pilus biogenesis/stability protein PilW [Teredinibacter
           turnerae T7901]
 gi|237684809|gb|ACR12073.1| type IV pilus biogenesis/stability protein PilW [Teredinibacter
           turnerae T7901]
          Length = 270

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 4/157 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L +     A       L++          L       G+   A +   KAL    D  
Sbjct: 60  SYLQQNNREGAQRSFTKALEMDPKSAEGYLGLAMIHQLNGEAEEADKKFNKALRSRVDFS 119

Query: 189 WVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             +   +  +  V  K +  A T+      +     R  A++ + R       G+   + 
Sbjct: 120 LASIQFSYARFLVEQKRYEEAYTYFEAASSDFNYPRRTDALVNVGRMALLL--GNKERAE 177

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                +L L      A++  A    +     KA   L
Sbjct: 178 GAFAHALNLDPRQAEAALELADMAFASRDYTKAARFL 214


>gi|271962297|ref|YP_003336493.1| hypothetical protein Sros_0731 [Streptosporangium roseum DSM 43021]
 gi|270505472|gb|ACZ83750.1| hypothetical protein Sros_0731 [Streptosporangium roseum DSM 43021]
          Length = 567

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 114/338 (33%), Gaps = 40/338 (11%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEV--QIALAERQYNI 138
            +L  G    AA    +A +  + V+      +       L   L    + A A   Y+ 
Sbjct: 150 DSLARGFYHHAA---RVASRGRAAVTPDGDLRHWWAFTTGLATALAALDRAAEALDLYHE 206

Query: 139 AHEKLEM----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           A    +     M    AT       L   S    D   A+ +  +A+ ++       + V
Sbjct: 207 ARAATDDPKITMSAAYATAMLYARHL---SAADQDPAQARHWLEQAIHLAAGLNDPRQRV 263

Query: 195 VQ----------QYVLAKEWSRAITFLNQKKKNAK------EWNRNRAILLIARSLENAD 238
           +               A E +RA+  ++             E  ++ A L   R+  +  
Sbjct: 264 LSTVFYEQGLALLDSRAGEPARALRLIDDGLARLAAVLTPGERPQDLARLRHNRAQVHLA 323

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297
            GD   +  D    +     +    +  A    +  + + A        ++ PH PE   
Sbjct: 324 LGDPAQALADLDTVIAHDPGNCEYYVDRAALHRAAGRSQAAIKDYGTAIRLGPHLPE--A 381

Query: 298 IYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            Y   + +   G+L RA     R   I+   +++ + +  + +E G++D A A A   + 
Sbjct: 382 YYNRAVLQQERGRLDRACDDLERALAIDPGHLDARIALVNLQVERGALDAAEAGARAGLA 441

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +AP++   L    + ++   +  +       AL   P+
Sbjct: 442 LAPQEPALLCTLGLIRSERGSLAEADELLSRALAGDPE 479


>gi|254445027|ref|ZP_05058503.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259335|gb|EDY83643.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 362

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 14/111 (12%)

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT--------HLLSENTVG 309
           + +   +     L++Q ++R     LE    ++ HP+  ++          +  +E+  G
Sbjct: 202 DYLPVYLMKGDLLLAQGEQRDGVRFLED--LLDEHPDSGDVKAVLVHGYQLYAYTESDAG 259

Query: 310 KLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +L RA        EI+ ++ ES+V ++    E G  ++A A     ++  P
Sbjct: 260 RLTRAIRSMRSSLEIDPDNAESMVGLASFLNEDGEYEEAEAVFEETIQKRP 310


>gi|168700800|ref|ZP_02733077.1| probable serine/threonine protein kinase [Gemmata obscuriglobus UQM
           2246]
          Length = 957

 Score = 42.2 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 24/215 (11%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R GD         +A    P   WV  ++ +   LA     A+ +L   +    +     
Sbjct: 595 RGGDPVPFLTRVRRA---HPGDFWVNHSLGRMLDLAGRCEDALRYLQVAQALRPDA---- 647

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A++     +  +  G    +      +++L      +   AA +L ++    +A  + E 
Sbjct: 648 AVVYHNLGITLSRCGRPGEALEQYRTAVRLDPACFPSYYNAAIALSAKGDHHEAVAMAEI 707

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE------INKESVESLVIVSKIALEMG 339
             +    P+IA I      ++     ++A  L +      ++     +   +  +    G
Sbjct: 708 GLRFA--PDIA-ILRSAYGDSLQAIGRKAEALAQYQRAVELDPRLPGTQRSLRALLFASG 764

Query: 340 SIDQAHAKAMLAMKIAP--------RKEIFLLLAQ 366
               A      A+   P          E+ LLL  
Sbjct: 765 RTADARVAWGKAIAADPLTHDEWDGYAELCLLLGD 799


>gi|312373537|gb|EFR21253.1| hypothetical protein AND_17299 [Anopheles darlingi]
          Length = 863

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 63/164 (38%), Gaps = 19/164 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+ +    E LE +LQ      P +    +          GD+ +A+   + A  
Sbjct: 538 RAAYFEKNH-GTRESLEALLQKAVAHCPQSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 595

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P++  +  A V+      E+ RA   L + + +A           +  +L + ++   
Sbjct: 596 ANPNSEDIWLAAVKLESENAEYERARRLLAKARASAPTPRVMMKSAKLEWALNDLEE--- 652

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +     +++++  +        AK  + + +  + + +LE+ 
Sbjct: 653 --ALSLLEDAVRVFPDY-------AKLWMMKGQIEEQKNLLERA 687



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           I D+  A+       + +P  P    A  +   +  +   A   + +  +   +      
Sbjct: 258 INDIKKARMLLKSVRETNPYHPPAWIASARLEEVTGKLQMARNLIMRGCEQNPQSEDLW- 316

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  LE A       +     ++ +    S+   I AA        KR    +  K 
Sbjct: 317 -------LEAARLQPPDTAKGVIAQAARRIPTSVRIWIKAADLETEPKAKR---RVFRKA 366

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+   +  +   +   E+    L RA    E    SVE  + ++++     + + A
Sbjct: 367 LEHIPNSVRLWKVAVEMENPEDAKILLSRA---VECCGTSVELWLALARL----ETYENA 419

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
                 A +  P    I+   A++E+AN +
Sbjct: 420 RKVLNKAREKIPTDRQIWTTAAKLEEANGN 449


>gi|262091698|gb|ACY25288.1| hypothetical protein [uncultured actinobacterium]
          Length = 255

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 10/186 (5%)

Query: 180 ALDISPDAPWVTEA--VVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLEN 236
           A    P    V +A    ++   A   +     + +K  +   +    R    +A +L+ 
Sbjct: 17  ARRSKPRVEEVYDAPERDEKRASAAALAHIEATVGKKINSVVGDVAAKRLTAKLALALDA 76

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----P 291
            ++     +    I   + C    +    A  SL    + R A   LE+   V+      
Sbjct: 77  FERERWQDAKRIIIPVSRDCPGIKLIHEIAGLSLYRLGQWRDAADHLEQARAVSGGEVLN 136

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKAML 350
           HP +A+ Y  L+    V +L R L+    + E   E  ++ +    + G + QA  + M 
Sbjct: 137 HPVLADCYRALMRYEKVDELWRELKEASPDPEIIAEGRIVAAGALADKGDV-QAAVRLMQ 195

Query: 351 AMKIAP 356
             K  P
Sbjct: 196 LAKQDP 201


>gi|256828561|ref|YP_003157289.1| TPR repeat-containing protein [Desulfomicrobium baculatum DSM 4028]
 gi|256577737|gb|ACU88873.1| TPR repeat-containing protein [Desulfomicrobium baculatum DSM 4028]
          Length = 453

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 14/205 (6%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
           +KG K L  G          LA              +  + ++++    L     + A E
Sbjct: 159 EKGKKLLEAG----GWGEALLA-----AEDILQQKPDSAVGFMIKGDAYLGLGMTSRAEE 209

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             +  ++        +  L     + GD         +  +ISP        + +  +  
Sbjct: 210 MYQRAVKGAELYLAPLKRLAVLYEQAGDAGKQLECLRRLNEISPLNTQRILHIGELEIAR 269

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              + A        + A+         L +R  +     D   + H + ++L L  ++I 
Sbjct: 270 GNTAVAEEMFQNVMRLAQREADEFLSNLSSRIADICASRDPDMAIHYSKKALDLRGDNIT 329

Query: 262 ASICA-----AKSLISQNKKRKAEV 281
           A+  A       SL  Q K R+A  
Sbjct: 330 AADMATVNILGISLRKQGKWREAIA 354



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 14/139 (10%)

Query: 134 RQYNIAHEKLE---MMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
               +A E  +    + Q  A    + + S   + C   D + A  Y+ KALD+  D   
Sbjct: 270 GNTAVAEEMFQNVMRLAQREADEFLSNLSSRIADICASRDPDMAIHYSKKALDLRGDNIT 329

Query: 190 VTE-AVVQQYV----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             + A V           +W  AI    +            A LL   ++  ++ G+   
Sbjct: 330 AADMATVNILGISLRKQGKWREAIAEYLRVLAVVPGS----ASLLYNMAMAYSEGGETKK 385

Query: 245 SYHDAIESLKLCDNSIMAS 263
           + +   ++LK+      AS
Sbjct: 386 ALNALQKALKIDPEL-PAS 403


>gi|150004556|ref|YP_001299300.1| hypothetical protein BVU_2011 [Bacteroides vulgatus ATCC 8482]
 gi|149932980|gb|ABR39678.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 273

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              LNQK    +++ +++NR           L AR+    +      +  D  E+ KL  
Sbjct: 167 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 226

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295
           +     +   +  +SQ KKR+A V  EK  ++  P PE+
Sbjct: 227 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 265


>gi|114763643|ref|ZP_01443037.1| hypothetical protein 1100011001335_R2601_16090 [Pelagibaca
           bermudensis HTCC2601]
 gi|114543644|gb|EAU46657.1| hypothetical protein R2601_16090 [Roseovarius sp. HTCC2601]
          Length = 278

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 12/103 (11%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKE 220
            R GD ++A    ++A+  +P    +   + Q   +  +W RAI  L        K    
Sbjct: 7   LRDGDPDAALAALSEAVRDAPQEARLRVFLFQLLCVQGDWPRAIQQLRTAATLDPKAGTM 66

Query: 221 WNRNRAILLIARSLENADKGD--------MIASYHDAIESLKL 255
               RA ++  R  E    G                 IE+LKL
Sbjct: 67  AQMYRAAIICERQREEVFAGQRAPMVLGEPDDWIAALIEALKL 109


>gi|77460971|ref|YP_350478.1| hypothetical protein Pfl01_4750 [Pseudomonas fluorescens Pf0-1]
 gi|77384974|gb|ABA76487.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 574

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 9/159 (5%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+  ++L     GD   +    +E     D  I   +  A+ L   N+  +A  +L+K  
Sbjct: 188 LIFGKALLMQQDGDTQGALTL-LEDNPPEDGEIAPILLRARLLQGLNRGDEALPLLQKSI 246

Query: 288 KVNPHPE---IANIYTH-LLSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSID 342
           K   +P+   +   Y   L+ ++ +   K     L +   E  E    ++ + LE  + D
Sbjct: 247 KK--YPDDKRLRLTYARMLVEQDRMDDAKVEFSTLVQQYPEDDELRYSLALVCLEAKAWD 304

Query: 343 QAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380
           +A       +      +   L L +I +  +     ++ 
Sbjct: 305 EAKGYLEDLIARESHVDSAHLNLGRIAEERNDPQGALIE 343


>gi|322784805|gb|EFZ11601.1| hypothetical protein SINV_02609 [Solenopsis invicta]
          Length = 566

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 74/212 (34%), Gaps = 25/212 (11%)

Query: 167 IGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
           I D+  A+       + +P+ P  W+  A +++  +  +   A   + +  +        
Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEE--VTGKVQAARNLIMKGCEVNPTSEDL 334

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                    LE A       +     +S++    S+   I AA        KR    +  
Sbjct: 335 W--------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETEVKAKR---RVYR 383

Query: 285 KIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K  +  P+   +      L   E+    L RA    E    SV+  + ++++     + D
Sbjct: 384 KALEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYD 436

Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373
            A      A +  P    I+   A++E+AN +
Sbjct: 437 NARKVLNKARENIPTDRQIWTTAAKLEEANGN 468


>gi|213514694|ref|NP_001133428.1| DnaJ homolog subfamily C member 7 [Salmo salar]
 gi|209153968|gb|ACI33216.1| DnaJ homolog subfamily C member 7 [Salmo salar]
          Length = 498

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ AT      V  L  Y+E C    ++ A ++  
Sbjct: 178 KVLKAECLAMLGRYPEAQSVASDILRMDATNGDALYVRGLCLYYEDC----IDKAVQFFV 233

Query: 179 KALDISPDAPWVTEAVVQQYVLA------------KEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A      L               +  A    ++         +  A
Sbjct: 234 QALRMAPDHEKARLACRNAKALKAKKEDGNKAFKDGNYDAAYELYSEALTIDPNNIKTNA 293

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R    +    +  +  D  +++KL +  I A +  A+  + + +  +A    EK+
Sbjct: 294 KLFCNRGTVGSKLKKIDQAIEDCTKAVKLDETYIKAYLRRAQCYMDKEEYDEAVRDYEKV 353

Query: 287 WKVN 290
           ++  
Sbjct: 354 YQTE 357


>gi|134300945|ref|YP_001114441.1| heat shock protein DnaJ domain-containing protein [Desulfotomaculum
           reducens MI-1]
 gi|134053645|gb|ABO51616.1| heat shock protein DnaJ domain protein [Desulfotomaculum reducens
           MI-1]
          Length = 402

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 14/139 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--- 257
            ++W +A     Q  + A E     A + +  +     +GD      +   +++L     
Sbjct: 96  EEKWDKAEELFRQALQIAPE----DAQVHLGLAYTTFWQGDERTFEEEFQRAVELAPVAE 151

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-----ANIYTHLLSENTVGKL 311
           + +M     A  L+   +  +A  +L+ + +  P H ++       +Y  L  E+ +  +
Sbjct: 152 DKVMLFTIKAGLLLDDERPEEALQVLQTVEQQYPQHRQLFHQLSVRVYIELGREDELWAM 211

Query: 312 KRALRLEEINKESVESLVI 330
            RA+ L     E+ E + +
Sbjct: 212 TRAM-LPAPGAENPEDIYL 229


>gi|116626162|ref|YP_828318.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229324|gb|ABJ88033.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 577

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 9/138 (6%)

Query: 127 VQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
                 + ++++A  + +    L+ P+      + L ++     DL  A     +A+   
Sbjct: 432 AFAYQEQGRFDLAVAEFQKTADLEPPSADLLIDWGLAYDGMNQPDL--ALAKFREAVAKE 489

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P A      V   Y    +W  A    +  +K    +    AI  + +   +    ++ A
Sbjct: 490 PSAH-AYTQVGYIYAKRSQWKEANEAFDMAQKIDPGF----AITYLYKGQVHLANNELPA 544

Query: 245 SYHDAIESLKLCDNSIMA 262
           +  +   +L+L      A
Sbjct: 545 ALAEFQHALQLDPRLEPA 562


>gi|260599823|ref|YP_003212394.1| cellulose synthase subunit BcsC [Cronobacter turicensis z3032]
 gi|260219000|emb|CBA34355.1| Cellulose synthase operon protein C [Cronobacter turicensis z3032]
          Length = 1167

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 47/169 (27%), Gaps = 16/169 (9%)

Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R              +     + L     A        A  + + +L+     E A   L
Sbjct: 584 RDSGQEAQAIALLRQQPASDRIDLTLADWAQQRGDNAAARAQYQTVLKRSPASEEARLGL 643

Query: 161 YFESCRIGDLNSAQ-RYATKALDI-----SPDAPWVTEAVVQQYVLAKEWSRAITFLN-- 212
                  GD  +A+ + A  AL        P +P     +        + +RA       
Sbjct: 644 AEALIADGDNAAAREQLA--ALQTPGAGGEPRSPGTQRRIANAQAALGDTARAQQAFAVL 701

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCDN 258
                 +  ++  A++L   +      G    +   Y DA+ +  +   
Sbjct: 702 AATARTQPPSQETALVLRDAARFQRQNGQPQQALQTYRDAMVASGIAPT 750



 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 53/199 (26%), Gaps = 15/199 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                    Q   A   L                L   + + GD  +A+      L  SP
Sbjct: 579 TANRLRDSGQEAQAIALLRQQPASDRIDLT----LADWAQQRGDNAAARAQYQTVLKRSP 634

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            +      + +  +   + + A   L   +                 +   A  GD   +
Sbjct: 635 ASEEARLGLAEALIADGDNAAAREQLAALQTPGAGGEPRSPGTQRRIANAQAALGDTARA 694

Query: 246 YHD----AIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKV---NPH-PEI 295
                  A  +     +   A +   AA+      + ++A              P  P  
Sbjct: 695 QQAFAVLAATARTQPPSQETALVLRDAARFQRQNGQPQQALQTYRDAMVASGIAPTRPAD 754

Query: 296 ANIYTHL-LSENTVGKLKR 313
            +++T L  ++ +   LKR
Sbjct: 755 NDVFTRLTRNDASDDWLKR 773



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 79/275 (28%), Gaps = 59/275 (21%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---------------------- 167
           A+A +    A       L++  T   AV  L     R                       
Sbjct: 395 AVANKNDAAAERYYRQALRMDNTNSNAVRGLANLYRRQSPERADAFIATLSASQRRSIED 454

Query: 168 ------GDL--------NSAQRYATKA------LDISPDAPWVTEAVVQQYVLAKEWSRA 207
                  D          +  R+A  A      L + P++ W+T  +      A     A
Sbjct: 455 IERSLTNDRLEQQAATLEAQGRFAEAAALQRQRLALDPESVWITYRLANDLASAGARRDA 514

Query: 208 ITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDM---IASYHDAIES-LKLCDNSIMA 262
              + Q  ++ A +  +  A  L     +            +      + L+L       
Sbjct: 515 DIVMGQLAQRKAGDPEQVYAYGLYLSGSDRQRAAQSHLNTLARDKWTPNILELSQRLQTN 574

Query: 263 SIC-AAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALR 316
            +   A  L    ++ +A  +L    +  P  +     +A+ +     +N   + +    
Sbjct: 575 ELMETANRLRDSGQEAQAIALL----RQQPASDRIDLTLAD-WAQQRGDNAAARAQ-YQT 628

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           + + +  S E+ + +++  +  G    A  +    
Sbjct: 629 VLKRSPASEEARLGLAEALIADGDNAAAREQLAAL 663



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 53/361 (14%), Positives = 99/361 (27%), Gaps = 65/361 (18%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
           D  Y+A   G+  +       A    +   + +   +E L  L   Q    +     A  
Sbjct: 267 DPAYRARMQGMARVEEGQGAKAVSELTTAVKANPNDSEALGAL--AQAYSQQGNRARAVP 324

Query: 142 KLE-MMLQIPA-----------------------------------------------TR 153
            LE  + Q P                                                T 
Sbjct: 325 LLEQALKQDPNSPNSGRWQSLLQVNRYWLLIQQGDAALKANNLAQAQQKYQQAATVDNTD 384

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVVQQYVLAKEWSRAITFL 211
            +AV  L   +    +  +A+RY  +AL +           A + +    +     I  L
Sbjct: 385 SYAVLGLGDVAVANKNDAAAERYYRQALRMDNTNSNAVRGLANLYRRQSPERADAFIATL 444

Query: 212 NQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +  ++ + E          L  ++     +G    +     + L L   S+  +   A  
Sbjct: 445 SASQRRSIEDIERSLTNDRLEQQAATLEAQGRFAEAAALQRQRLALDPESVWITYRLAND 504

Query: 270 LISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHLLSENTVGKLK--RALRLEE--INKES 324
           L S   +R A++++ +   +    PE    Y   LS +   +        L         
Sbjct: 505 LASAGARRDADIVMGQLAQRKAGDPEQVYAYGLYLSGSDRQRAAQSHLNTLARDKWTPNI 564

Query: 325 VE-SLVI----VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           +E S  +    + + A  +    Q      L  +      I L LA   Q    +     
Sbjct: 565 LELSQRLQTNELMETANRLRDSGQEAQAIALLRQQPASDRIDLTLADWAQ-QRGDNAAAR 623

Query: 380 Y 380
            
Sbjct: 624 A 624


>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 21/266 (7%)

Query: 117 HNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
            NE    LL               A E  ++  ++  +   A  +         +   A 
Sbjct: 56  ENESFSALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAA 115

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               KAL I   +  V     + Y L  +   A+    +  K   +  +     L  R  
Sbjct: 116 YIIEKALQIDRRSKEVWGTKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPK 175

Query: 235 ENA---DKGDMIASYHDAIESLKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILE 284
           +      KG  +       E +K+    +  +       +    +  + ++ R+A   L+
Sbjct: 176 DLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALK 235

Query: 285 KIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K  K++P+       +  +Y           LK      +I+    +S  + +   L + 
Sbjct: 236 KAIKIDPNDKKSWINLGILYK--KRGEYEEALKCFKEAIKIDPNDKKSWYLEA-SVLHIL 292

Query: 340 SID-QAHAKAMLAMKIAPRKEIFLLL 364
             D +A      A+++  + E  LLL
Sbjct: 293 ERDSEALKSINRALELDKKYESALLL 318



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 22/165 (13%)

Query: 134  RQYNIAHEKLEMMLQ-IPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                 A + +E  ++     +        +Y    ++GDLNSA  YA KA ++       
Sbjct: 867  GDLQEAIKAIERAIEWKKDAKFYLLGSR-IY---LKMGDLNSAYNYANKAFEL----EDS 918

Query: 191  TEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMIASY 246
             +A +          ++   I  L    K   + N   A+ L+ ++LE  ++  D +  Y
Sbjct: 919  DDARINLASIMFELGKYDDVIALL----KPLGKNNNLDALRLLGKALEAEERYEDAVKIY 974

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +  ++  K   +S    I   +  ++ NK  +A    E+   ++P
Sbjct: 975  NKVVDIDKKDKSSW---ISLGRCYLTLNKYNEAIKAFERASLIDP 1016


>gi|134084415|emb|CAK43198.1| unnamed protein product [Aspergillus niger]
          Length = 537

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 94/316 (29%), Gaps = 52/316 (16%)

Query: 60  AVSRFFLSCPAMLFHMLHKRN----YDKGYKALYTG--------LMSIAAH-----NIPL 102
            + RF       L             D+  + L  G        LM+  A      +   
Sbjct: 150 KMLRFVSQAEEALSQDRGVSMVLFCLDQARQLLGQGVKEPRKWTLMTAEAQLKMGNDNSY 209

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
            +     +S       +    ++  +          A + L+M L +             
Sbjct: 210 GKAQDIAISMLRVNSQDPDALMIRARAFYGMGDTEQALKLLKMCLGLDP----------- 258

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                 D+ +A +       +         A       AK++ RAI    +      +  
Sbjct: 259 ------DMKAAIKLLRTVQKLVRTKEEGNTAF-----KAKDYRRAIDLWGEALTVDPKNK 307

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A +L  R+    +  +  ++  D  E+L+L    + A    AK+        +A   
Sbjct: 308 DQNAKILQNRAQAYINLKEYDSAVADCNEALRLDPGYLKAQKMRAKAHGGAGNWEEAVRD 367

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            + + + NP             +    +++RA    E+ K   +    +  ++ + G  +
Sbjct: 368 YKAVAESNP-----------TEKGIQEEIRRAEF--ELKKAQRKDYYKILGVSKDAGEQE 414

Query: 343 QAHAKAMLAMKIAPRK 358
              A   +A++  P K
Sbjct: 415 IKKAYRKMAIQYHPDK 430



 Score = 40.3 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 64/183 (34%), Gaps = 26/183 (14%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               ++RAI    +  + +       ++ L  R+         +A+  D   + +L   +
Sbjct: 54  KDGNYARAIEEFTKALEISPNS----SVYLSNRAAAYMAANQYLAALEDCERACELDPTN 109

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
                  A+ L S  +  +A  +L    ++ P              +   +   A ++  
Sbjct: 110 TKIMYRLARILTSLGRPTEALDVLS---RIEP------------PASATDRAA-AEKMLR 153

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHNTD 376
              ++ E+L     +++ +  +DQA       +K       + L+   AQ++  N ++  
Sbjct: 154 FVSQAEEALSQDRGVSMVLFCLDQARQLLGQGVKEP---RKWTLMTAEAQLKMGNDNSYG 210

Query: 377 KIL 379
           K  
Sbjct: 211 KAQ 213


>gi|85001147|ref|XP_955292.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65303438|emb|CAI75816.1| hypothetical protein, conserved [Theileria annulata]
          Length = 540

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 12/157 (7%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +Y+ A    +  L    TR+    SL  +  R+ +         K   I+P+        
Sbjct: 310 KYDDAISCYQKSLIENNTRQT--RSLLSDLERLKERK------EKEAYINPELAEQHREK 361

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
             +Y    ++  A    ++  K       + A L   R+       +  ++  D  ++++
Sbjct: 362 GNEYFKEFKFPEAKKEYDEAIKRNP----SDAKLYSNRAAALLKLCEYPSALADCNKAIE 417

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           L    + A        +   +  KA    +K  KV+P
Sbjct: 418 LDPTFVKAWARKGNLHVLMKEYHKAMDAYDKGLKVDP 454


>gi|315047698|ref|XP_003173224.1| DnaJ domain-containing protein [Arthroderma gypseum CBS 118893]
 gi|311343610|gb|EFR02813.1| DnaJ domain-containing protein [Arthroderma gypseum CBS 118893]
          Length = 327

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/268 (11%), Positives = 77/268 (28%), Gaps = 40/268 (14%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173
            +  +  LL   +  LA      A       +    +   ++           +G  + A
Sbjct: 28  PDTPVSSLLSSAKTHLASGSAENALLYFNAAIDKDPSNYLSIFQRG--AAYLSLGRHSRA 85

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232
                + L + P          +  + +  W+ A   L    K  + +  +     + A 
Sbjct: 86  ADDFNRVLKLKPGFEGALLQRGKLRMRSGNWAGAKEDLEAAGKPGEGDLVQLHEAQVAAL 145

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + E+A+K     +     +S          +I  A       + R               
Sbjct: 146 AAEDAEKKQDWEACVA--QSN--------IAIMKAMGSTELRRIR--------------- 180

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLA 351
                   HL   +    +    RL +++  +V+  + + + +   +   ++        
Sbjct: 181 -----GKCHLERGDIQEGINDLTRLTQLSPNNVDPYLQISAMLFYSLADTERGMDHIRKC 235

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           +   P  +I     ++ +    N+ +I 
Sbjct: 236 LHSDPDSKICS---RLFRGEKRNSKQIK 260


>gi|221310175|ref|ZP_03592022.1| hypothetical protein Bsubs1_12411 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314497|ref|ZP_03596302.1| hypothetical protein BsubsN3_12332 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319419|ref|ZP_03600713.1| hypothetical protein BsubsJ_12258 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323695|ref|ZP_03604989.1| hypothetical protein BsubsS_12387 [Bacillus subtilis subsp.
           subtilis str. SMY]
          Length = 449

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 87/248 (35%), Gaps = 16/248 (6%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC-RIGD 169
            +    NE ++     ++  A+  Y  A +  +   +         V+    ES    G+
Sbjct: 153 AKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESLSASGE 212

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A  +  KA+D +PD       +      A + +  +    ++  + KE + +   L 
Sbjct: 213 FEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPSYTSLY 267

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +  S     +G    +   A E ++  + +    + AAK  +   K  + + +L++   +
Sbjct: 268 MPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALAL 327

Query: 290 NP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +P      H  +A    +   E+    +     +    +E  +    ++    E+   ++
Sbjct: 328 DPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEE 384

Query: 344 AHAKAMLA 351
           A      A
Sbjct: 385 AKQSFEAA 392



 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L +K+K+  + N      LI  +++  + G+     +   ++ K   +   A   AA+  
Sbjct: 17  LYRKRKDRSDLN-----TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLY 69

Query: 271 ISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVES 327
                  KA  ++  +  + P+  E+ N Y  LL +       L     + E +    ES
Sbjct: 70  YEWGDVEKAISLISDLHDLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPES 129

Query: 328 LVIVSKIALEMGSIDQAHAKAMLA 351
           L++++ +    G  + +  K   A
Sbjct: 130 LLLMADLYQMQGLFEVSEQKLFQA 153


>gi|205352618|ref|YP_002226419.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272399|emb|CAR37279.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627683|gb|EGE34026.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 371

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 27/249 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A+    K  D +     
Sbjct: 65  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAAGLYDRAEDMFNKLTDETEFRVG 124

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM  +   
Sbjct: 125 ALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDMDRAMAL 184

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             +      NS   SI   +  +++    KA   L+++   +           L+SE   
Sbjct: 185 LKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KELVSETLE 235

Query: 309 GKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA-------MKIAP 356
                  +L +  + +      V     +   L +  I +A   +  A       ++  P
Sbjct: 236 MLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITRQLQRHP 295

Query: 357 RKEIF-LLL 364
              +F  L+
Sbjct: 296 TMRVFHKLM 304


>gi|300866716|ref|ZP_07111400.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300335316|emb|CBN56560.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 201

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 11/123 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               GD + A    T+A+ ++P+ P +            +   AI   NQ  +    +  
Sbjct: 48  KLLKGDYSGAIEDFTEAIRLNPNQPGIYSNRGLARASKGDIQGAIADYNQAIRINPNY-- 105

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             AI  + R L  +   +   +  D  ++L+L  N         ++  ++   R      
Sbjct: 106 --AIGYLHRGLAYSALKNYQYALSDYDQALRLNPNL-------GEAYYNRGNIRHYLKEK 156

Query: 284 EKI 286
           E  
Sbjct: 157 EAA 159


>gi|298708286|emb|CBJ48349.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 3821

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 84/298 (28%), Gaps = 73/298 (24%)

Query: 127 VQIALAE------RQYNIAHEKLE----MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174
            Q            ++  A             + + RE     + L       G    A 
Sbjct: 66  AQALGLGRVLLSRGEHEEAALVYRVAASAAAAVDSNREHGEAQHGLGLALLATGRPEEAL 125

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------------ 222
               +A  + PD P  T  +      A + + A+T L       +               
Sbjct: 126 VACREAERLDPDLPTATSCIGAILTDAGDIAGALTALRHAADKTERGEVTAGLWRDAEGT 185

Query: 223 ------RNRAILLIARSLENA-------------DKGDMIASYHDAIE------------ 251
                 R  A LL A  ++ A               GD  A+Y+  +             
Sbjct: 186 ADTIHGRLGAALLAAGEVDEAIEVLTRVELEARRAGGDPHAAYNLGVAWQTKGETEKAIV 245

Query: 252 ----SLKLCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPE-IANIYTHL--- 302
               +  L        +     L+   +  +AE + L    +    P  +A  Y++L   
Sbjct: 246 AYSRATDLAPTLAAPRVNLGAQLLQSGRLAEAEAVLLSAAERARDDPISLAATYSNLGAV 305

Query: 303 -----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                  E  +    RA++          SLV ++K+  E+G ++QA      AM   
Sbjct: 306 FQRSGKPEEALESYSRAVQSGAGRP----SLVHIAKLHHELGQLEQAREACRRAMLEE 359



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 50/196 (25%), Gaps = 25/196 (12%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           + NR          L     G    +     E+ +L  +   A+ C    L        A
Sbjct: 99  DSNREHGEAQHGLGLALLATGRPEEALVACREAERLDPDLPTATSCIGAILTDAGDIAGA 158

Query: 280 EVILEKI-------------WKVNP------HPEI-ANIYTHLLSENTVGKLKRALRLEE 319
              L                W+         H  + A +      +  +  L R      
Sbjct: 159 LTALRHAADKTERGEVTAGLWRDAEGTADTIHGRLGAALLAAGEVDEAIEVLTRVELEAR 218

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL--LLAQ-IEQANSHNTD 376
                  +   +       G  ++A      A  +AP        L AQ ++       +
Sbjct: 219 RAGGDPHAAYNLGVAWQTKGETEKAIVAYSRATDLAPTLAAPRVNLGAQLLQSGRLAEAE 278

Query: 377 KILYWTQSALHAMPDP 392
            +L    +A  A  DP
Sbjct: 279 AVL--LSAAERARDDP 292


>gi|197124256|ref|YP_002136207.1| hypothetical protein AnaeK_3867 [Anaeromyxobacter sp. K]
 gi|196174105|gb|ACG75078.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
          Length = 967

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 12/202 (5%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLK 254
                 +++ A   L +  ++     R  A   +  +L +  +G           + + +
Sbjct: 721 ARYRLGQYAAARAELERTARDG----RMPAEAAVWYALTDVAQGRAARGRTLLEKLAATR 776

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKL 311
                  A +   ++L ++ +   AE   +         P P +A     L        L
Sbjct: 777 SPPPL--AHVALGRALEAEGRADDAEKAYQDAMARDPRAPEPALALGDLLLRRGRAGDAL 834

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
               +   ++    E+   +    L  G    A A+    +   P+    L L       
Sbjct: 835 PFLEKAVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLA 894

Query: 372 SHNTDKILYWTQSALH-AMPDP 392
                +     +  L  A  DP
Sbjct: 895 ESQPAEARRAAERGLAVAPRDP 916



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 63/226 (27%), Gaps = 7/226 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+G   +A+    +                   V     +R  T L +            
Sbjct: 724 RLGQYAAARAELERTARDGRMPAEAAVWYALTDVAQGRAARGRTLLEKLAATRSPPP--- 780

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +  +A       +G    +     +++     +   ++     L+ + +   A   LEK
Sbjct: 781 -LAHVALGRALEAEGRADDAEKAYQDAMARDPRAPEPALALGDLLLRRGRAGDALPFLEK 839

Query: 286 IWKVNPH-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              ++P  PE   A     L              +     +   +L ++S   L      
Sbjct: 840 AVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLAESQPA 899

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           +A   A   + +APR    LL          +        + AL A
Sbjct: 900 EARRAAERGLAVAPRDPALLLAGARAAQADGDRAVARALAERALKA 945


>gi|26354607|dbj|BAC40930.1| unnamed protein product [Mus musculus]
          Length = 463

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                   +  + +L         ++  A   +E  L   + + + +        R   +
Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A     +AL  SP + ++                         +    + +  + L  
Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295

Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +R+ +   + ++      AI    E+LKL     MA +C A+     ++  +AE   +K 
Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                      +  H+  +  +    R  R  + +K+S +  + +    L++     A  
Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405

Query: 347 KAMLAMKIAPRKEIF 361
           K + A++    + + 
Sbjct: 406 KLLTALEKVAERRVC 420



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 38/236 (16%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKK 216
                 C  GD   A     KAL + P+ P      AVV       +   ++  L +  +
Sbjct: 143 GWALLKCGGGDYKQAMACFAKALKVEPENPEYNTGYAVVAYRQDLDDNFISLEPLRKAVR 202

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQN 274
              E    + +L    +L+  D G+ + +     E+  L   S  + +   AAK    ++
Sbjct: 203 LNPEDPYLKVLL----ALKLQDLGEHVEAEAHIEEA--LSSTSCQSYVIRYAAKYFRRKH 256

Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIY------THLLSENTVGKLKRALRLE----- 318
           +  KA  +L +  + +P     H +    Y                +      L      
Sbjct: 257 RVDKALHLLNRALQASPSSGYLHYQKGLCYKQQISQLRTSRNRQPRRQDNVQELAQQAIH 316

Query: 319 ------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
                 ++      + V ++++  E+   ++A      A+          L+A IE
Sbjct: 317 EFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKALNNK------TLVAHIE 366


>gi|86606961|ref|YP_475724.1| TPR repeat- and protein kinase domain-containing protein
           [Synechococcus sp. JA-3-3Ab]
 gi|86555503|gb|ABD00461.1| protein kinase domain/TPR repeat protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 952

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 36/308 (11%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREF 155
            +   A    S V ++     E        +  L    +  A E   + +   P   +  
Sbjct: 448 GDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQLL--DFQGAIEDYTQALQLDPGHPKAC 505

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-------VTEAVVQQYVLAKEW-SRA 207
               L  ++   GDL  A    ++A+ +               +A +          + A
Sbjct: 506 YRRGLARQAL--GDLQGAITDFSQAIALRATQGEEPSGAVAAAQAELYLQRAVAYLSNNA 563

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +       + A   N   A+    R L     GD   +  D   +L+L      A +   
Sbjct: 564 LEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALADFNRALELDPRLAKAYLKRG 623

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--LRLEEIN---- 321
            + +       A   L +         IA   + + + ++ G++ R     L  +     
Sbjct: 624 IAHLELGHLEAALADLNQA--------IALDASDVGARSSRGQVHRLLGDPLAALQDYTA 675

Query: 322 -----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSH 373
                  + +      +I  E      A      A++ A +        L+A+I      
Sbjct: 676 ALERDPRNPQLYFDRGQIYFEQEDWAAACEDFSQALQWAGQPGGPHGLDLMARIHLYRGM 735

Query: 374 NTDKILYW 381
              ++  W
Sbjct: 736 ARQRLEDW 743



 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 72/241 (29%), Gaps = 20/241 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
                L +A     +AL ++P                 + + A+   N+      E +  
Sbjct: 559 LSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALADFNRAL----ELDPR 614

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A   + R + + + G + A+  D  +++ L  + + A     +          A     
Sbjct: 615 LAKAYLKRGIAHLELGHLEAALADLNQAIALDASDVGARSSRGQVHRLLGDPLAALQDYT 674

Query: 285 KIWKVNP-HPEI----ANIYTHLLSENTVGKLKRALRLEEIN--KESVESLVIVSKIAL- 336
              + +P +P++      IY     E+     +   +  +          L ++++I L 
Sbjct: 675 AALERDPRNPQLYFDRGQIYFE--QEDWAAACEDFSQALQWAGQPGGPHGLDLMARIHLY 732

Query: 337 ------EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                  +     A A     ++  P+      L         + +  L     A+    
Sbjct: 733 RGMARQRLEDWQGALADFTALIQEQPQASQGFALRAAVHLVLGDEEAALADLDRAIGCNR 792

Query: 391 D 391
           D
Sbjct: 793 D 793



 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 11/200 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E  R GDL  A    T A+ + P                 +W+ A+    +  +     
Sbjct: 306 QEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAGAVEDFTRAIQLGG-- 363

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A     R +     G+   +  D   +L+L  +  +A      +    ++ ++A  
Sbjct: 364 --GDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAIE 421

Query: 282 ILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
              +  ++N  PE    Y           +  G +     +   + +  E+         
Sbjct: 422 DYSRALELN--PEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARA 479

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
           ++     A      A+++ P
Sbjct: 480 QLLDFQGAIEDYTQALQLDP 499



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 90/288 (31%), Gaps = 22/288 (7%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             G +     + PLA       + +    N  L Y    QI   +  +  A E     LQ
Sbjct: 655 SRGQVHRLLGD-PLAALQDYTAALERDPRNPQL-YFDRGQIYFEQEDWAAACEDFSQALQ 712

Query: 149 -----------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
                          R      +  +  R+ D   A    T  +   P A          
Sbjct: 713 WAGQPGGPHGLDLMARIHLYRGMARQ--RLEDWQGALADFTALIQEQPQASQGFALRAAV 770

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI-ASYHDAIESLKLC 256
           +++  +   A+  L++     ++W    A L   +  +   + + +  +  D  + L L 
Sbjct: 771 HLVLGDEEAALADLDRAIGCNRDWGLADAALAYRQRGDLHRQANRLQQAIADYTQVLALN 830

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IANI----YTHLLSENTVGK 310
                A +  A       +  +A     ++ ++ P P+  +  +    + +    +    
Sbjct: 831 PQERHALLWRALLWDQAGEIERALADYTQLLQLEPDPQTRLWALNNRGWAYAQQGDFAAA 890

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           ++   ++ E +   +++    +     +G    A      A+++   +
Sbjct: 891 IRDYTQVLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQGYE 938


>gi|326428775|gb|EGD74345.1| hypothetical protein PTSG_06355 [Salpingoeca sp. ATCC 50818]
          Length = 1374

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 45/152 (29%), Gaps = 22/152 (14%)

Query: 117  HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---------SLYFESCRI 167
             N         Q   +      A +  +  L I  T                L   +   
Sbjct: 1093 PNTAATLYEIAQAHRSMGNVEEAAQFYQRSLGI-YTAVLGERHPDLATVYSGLTQLALDC 1151

Query: 168  GDLNSAQRYATKALDIS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKK---- 215
            GD ++A RY  K LDIS        P V     Q    +V   +  RA+    +      
Sbjct: 1152 GDYDTALRYLEKDLDISLDAHGEQHPDVGTTYAQYAHAHVGKGDLDRALECGEKSLAIFA 1211

Query: 216  KNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                E + + A+   A +   A +GD   S  
Sbjct: 1212 ATVGEDHMSTALAYDALAAVYAARGDEQRSQE 1243



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 23/123 (18%)

Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLE------------EINKESVESLVIVSKIAL 336
             HPEIA  Y  L    ++ G+  RA                E++  +  +   +  +A 
Sbjct: 586 QQHPEIAMTYLELSDVYDSAGETARAHEYATTALAILQRTVGELHPYTANANHSLGVLAS 645

Query: 337 EMGSIDQAHAKAMLAMKI--------APR-KEIFLLLAQIEQANSHNTDKILYWTQSALH 387
             G  D+A A A   ++I         P     +L +++I   N  +  +    T++AL 
Sbjct: 646 GAGDYDKAMAFAEKDLEISRASLGDMHPDVAATYLHISEILD-NKGDYTRARECTETALR 704

Query: 388 AMP 390
            + 
Sbjct: 705 ILR 707


>gi|269839838|ref|YP_003324531.1| methyltransferase type 12 [Thermobaculum terrenum ATCC BAA-798]
 gi|269791568|gb|ACZ43708.1| Methyltransferase type 12 [Thermobaculum terrenum ATCC BAA-798]
          Length = 436

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 5/138 (3%)

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
                +A+ + P+      A+         ++ A    + ++  A E+ R R+   +A +
Sbjct: 94  LASFEQAIALDPECGEAHCALGGALQEVGRFAEAEQ--HCRRSLALEFERPRSYFFLANA 151

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292
           L +   G ++ +      +L L  +   A    A     + +  +A  +LE    + P +
Sbjct: 152 LCSL--GRLLEARECFRAALALDPSYSDAHWTLATVYRVKGRTAEALRVLECGSALAPDN 209

Query: 293 PEIANIYTHLLSENTVGK 310
           PEI  I   L       +
Sbjct: 210 PEIPFILEALKGSYAPSR 227


>gi|254459760|ref|ZP_05073176.1| Alpha-2-macroglobulin N-terminal domain family protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206676349|gb|EDZ40836.1| Alpha-2-macroglobulin N-terminal domain family protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 1811

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 30/151 (19%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------------------QYVLAK 202
               D ++A   A K   + P   W  + ++                           A 
Sbjct: 118 LSQQDRDAALVQAEKLGALHPGGQWTVQVLLDAVRDRRVEKNLKSAMHWQGAATAQSDAS 177

Query: 203 E-WSR-AITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAIESLK 254
           + W+  A   L  K KN+ E  + R   L A      R+   A +   +    +A+E  +
Sbjct: 178 DMWAEYARLALEVKGKNSTETRKLRQRALSAATNAYLRAPSAAAQVSALQIMAEAMEQTR 237

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              + I A   AA      +     +  + K
Sbjct: 238 RGRDMIPALRLAANLQPRDDIIAALDKAINK 268


>gi|119489716|ref|ZP_01622475.1| hypothetical protein L8106_13365 [Lyngbya sp. PCC 8106]
 gi|119454453|gb|EAW35602.1| hypothetical protein L8106_13365 [Lyngbya sp. PCC 8106]
          Length = 1112

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 8/133 (6%)

Query: 126 EVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDI 183
           E        Q   A       + + P    +  Y    E+  ++G L+ A     +A+ +
Sbjct: 31  EANQLQRSGQLEEAVGAYRQAIAENPD--FYWSYHNLGETLWKLGRLDEAVEVFRQAVAL 88

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLENADK 239
           +P A W    + +          AI    Q  +    WN    R   +LL      ++ K
Sbjct: 89  NPSAAWSHFNLGEVLEQQGRTEEAIAAYRQALQFNPAWNEVKERLAELLLTVGRSSSSAK 148

Query: 240 GDMIASYHDAIES 252
           G   ++   A+ +
Sbjct: 149 GARGSTLETALPA 161


>gi|83719090|ref|YP_442157.1| TPR domain-containing protein [Burkholderia thailandensis E264]
 gi|83652915|gb|ABC36978.1| TPR domain protein [Burkholderia thailandensis E264]
          Length = 626

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 95  GRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRALALAPGDASIHNN 154

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G    A     +AL++ P        +        +   AI           
Sbjct: 155 LGNALNALGRHGDALAAFRRALELRPGHAGAHNNLGMALAALGDTEEAIAHFRAALAAEP 214

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    +      +L L     +A    A +L +  + R A
Sbjct: 215 RF--VAAHFNLGNALDAV--GRHAQALSAFESALALQPRFPLALFGLANALAALGRHRDA 270

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  +  L +++
Sbjct: 271 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 324



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L+ A+     AL  +P                     A   + +      E   
Sbjct: 23  AHRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 78

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A L +         G +  +      +L L     +A      +  +Q +   A    
Sbjct: 79  NDAALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 138

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           ++   + P     H  + N    L        L    R  E+      +   +      +
Sbjct: 139 QRALALAPGDASIHNNLGNALNALGRHG--DALAAFRRALELRPGHAGAHNNLGMALAAL 196

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  ++A A    A+   PR
Sbjct: 197 GDTEEAIAHFRAALAAEPR 215


>gi|78212361|ref|YP_381140.1| hypothetical protein Syncc9605_0817 [Synechococcus sp. CC9605]
 gi|78196820|gb|ABB34585.1| hypothetical protein Syncc9605_0817 [Synechococcus sp. CC9605]
          Length = 467

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 47/162 (29%), Gaps = 15/162 (9%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMM 146
            G+ +  A N   A        ++     E    LV LL       + ++       E +
Sbjct: 11  KGVQAAMAGNHIEAENFFRQAIKESDTAIEGSMNLVRLLH-----MQGRHAETIRAFEEL 65

Query: 147 LQIPATREFAVYSLY---FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
                  +     LY     +  +GD  +A R        +P    +   + +  + +  
Sbjct: 66  QTKAQIEKIHPQILYMVTQSALDLGDQKTALRNLRVLAPQNPKNSEIQCMLSKILIESGR 125

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              +   L Q      +       +    ++  ++ G+   +
Sbjct: 126 LVESKKVLEQAMLVNPD----DPSIATQLAITQSELGNYDKA 163


>gi|326430914|gb|EGD76484.1| tetratricopeptide TPR_2 repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 660

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 78/310 (25%), Gaps = 87/310 (28%)

Query: 129 IALAERQYNIAHEKLEMMLQIP-ATREFAVY---------SLYFESCRIGDLNSAQRYAT 178
              ++ +++ A    E  L I   T                L       GD + A  +  
Sbjct: 368 AYDSKGEHDRAIACFEKALGIQVET--LGEKHPSIADSYLGLGIAYRSKGDFDKAIHFYE 425

Query: 179 KALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------------- 216
           KAL I         P        + +      ++ RAI    +                 
Sbjct: 426 KALAIKVEALGKKHPSTATSCNNLGEACYSKGDYDRAIACYEKALAIQVETLGEKHPATA 485

Query: 217 ---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
                    + +     RA   + ++L    +         A   + L    +       
Sbjct: 486 VTLVNIGRVHNQTGGNERACAYMQQALAIEVEALGEKHPSTANTCINL--GFV------- 536

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
               S+ +  KA    EK         +A                R   L E +  +  S
Sbjct: 537 --YASKGEYDKAIRYYEKA--------LAI---------------RVETLGEKHPTTATS 571

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMK--------IAPRKEIFLLLAQIEQANSHNTDKIL 379
              +  +  E G+ ++A A    A+           P         ++++    ++    
Sbjct: 572 YFTLGLLHDERGNKERACACIQHALDVRTAILGPDHPSTRKAE--RELQRIRGGDSKTKQ 629

Query: 380 YWTQSALHAM 389
            W   A+   
Sbjct: 630 DWVLFAVCCP 639


>gi|312892332|ref|ZP_07751827.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
 gi|311295116|gb|EFQ72290.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
          Length = 577

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 11/205 (5%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           LA ++ + + Q    ++  +  L   +I   +     A E  E  + +    ++    L 
Sbjct: 62  LAAELFNRILQIDPANDASMFEL--AKIKKIQNNEAGARELFERAVTVNRDNKYYWIGLA 119

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
               +  DL   +    +   + PD P         Y + K +  A+   +Q +K     
Sbjct: 120 ESYEKTNDLVKLENVFNELTRLDPDNPEYLFDKANAYFIEKRYDEALAIYDQLEKRLGLN 179

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +     ++  R      +G +  +  +  E +K   + +   +  ++   S     KA  
Sbjct: 180 DD----IIANRQKIYLKQGKIDKAAAELEEMIKANPDQMRYYLLLSEIYNSNGFNDKALK 235

Query: 282 ILEKIWKVNP-----HPEIANIYTH 301
           +LEK  KVN      H  +A++Y  
Sbjct: 236 VLEKAEKVNSNSGMIHLALADVYKD 260


>gi|307107245|gb|EFN55488.1| hypothetical protein CHLNCDRAFT_133862 [Chlorella variabilis]
          Length = 425

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
           E NKE  E  + V++ AL+ G   +A   A  A+K+ P+ +  LLLA+I++A   
Sbjct: 3   EANKEQAEKCLEVAEAALKAGDTAKAERFAGKALKLFPQDKARLLLARIKRAAGA 57


>gi|292488377|ref|YP_003531259.1| hypothetical protein EAMY_1901 [Erwinia amylovora CFBP1430]
 gi|292899572|ref|YP_003538941.1| hypothetical protein EAM_1862 [Erwinia amylovora ATCC 49946]
 gi|291199420|emb|CBJ46537.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291553806|emb|CBA20851.1| Uncharacterized protein yciM precursor [Erwinia amylovora CFBP1430]
 gi|312172520|emb|CBX80776.1| Uncharacterized protein yciM precursor [Erwinia amylovora ATCC
           BAA-2158]
          Length = 389

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 86/253 (33%), Gaps = 16/253 (6%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  A+  L  +    G  + A++   + +D +     
Sbjct: 83  GEVDRAIRIHQALMESDSLTYDQRLLAIQQLGRDYMAAGFYDRAEQMFGQLVDETDFRVG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W  AI    +  K  K   +   A      +L+     D+  +   
Sbjct: 143 ALQQLLIIHQATSDWLNAIDAAERLVKLGKSRLKMEIAHFYCELALQAMSSDDLERAMSL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIANIYTHL 302
             +      NS   SI   +  ++Q +  KA    + ++E  K         + + Y HL
Sbjct: 203 LKKGEAADRNSARVSIMMGRIHMAQAEYAKAVQHLQRVIEQDKELVSETLDMLESCYRHL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             E     L    R  E N  +  + + ++ I  +    + A       ++  P   +F 
Sbjct: 263 --EQAPAWLSYLERCVEENTGAA-AELYLAGILDQQDGAEAAQTYITRQLQRHPTMRVFH 319

Query: 363 LLAQ--IEQANSH 373
            L    +++A   
Sbjct: 320 RLIDFNLQEAEDG 332


>gi|149375467|ref|ZP_01893237.1| hypothetical protein MDG893_16462 [Marinobacter algicola DG893]
 gi|149360172|gb|EDM48626.1| hypothetical protein MDG893_16462 [Marinobacter algicola DG893]
          Length = 1155

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 82/281 (29%), Gaps = 27/281 (9%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAE-----RQYNIAHEKLEMMLQIPAT 152
             L  +             E     L   VQI   +      + +I   + E +L    +
Sbjct: 456 ASLYWRTRQPERALALLDFEPQDRQLAETVQIMRMDLANSLGRTDILKREYESLLTRSDS 515

Query: 153 RE---FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                     L   +    D   A   +     +    P    A+ +  +   +W     
Sbjct: 516 ELTPNLEER-LLNLAALFEDYPRALSLSEHLF-LETGQPRFLAAIAEYQLALGQWQELEQ 573

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L + + +      N       R+L +    +++A+      + +L  +    ++  + +
Sbjct: 574 TLERWQTDVPTARNNPRY-WSLRALIHQRNDEVLAANDAYRAAWELAPD--DENLMISWA 630

Query: 270 LISQNKKRKAEVILEK-------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +      +    L+              +P +A  Y+ L        L    +  +   
Sbjct: 631 WLQLANAEQFADTLQALLARIGDAPSPAAYPVLAYGYSAL--GQPRKALDWFRQGMKTRS 688

Query: 323 ESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEI 360
           + +E L+  +++  + G+   A     KA   ++  P    
Sbjct: 689 DDIEWLLATARLLEQTGAPGTATDLRQKAAAKLREDPSTRA 729


>gi|149176851|ref|ZP_01855461.1| probable O-linked GlcNAc transferase-putative TPR-containing
           transmembrane protein [Planctomyces maris DSM 8797]
 gi|148844288|gb|EDL58641.1| probable O-linked GlcNAc transferase-putative TPR-containing
           transmembrane protein [Planctomyces maris DSM 8797]
          Length = 703

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 41/226 (18%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L          +  Q +A K     PD   +   +       +EW  AIT L Q  K   
Sbjct: 504 LMQLERFHEARDLLQPFAEK----YPDNLQIQRFLGSILTQTREWQAAITHLEQAHKLDP 559

Query: 220 EWNRNRAILLIAR--SLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQ 273
           + +     L  A   + E + + + +  +  A     ++L+L   +  A    A++ I  
Sbjct: 560 DDSEICNNLGSAYEKAAETSQQDNTVELFETAARFWQKALRLDPRNSFARYNLARNKIRL 619

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            +  +A   L ++ + +P  E+A               +    L  ++ +          
Sbjct: 620 EQHSEALADLNQLLEEHPEFELAE--------------QGLEPLV-MSPD---------- 654

Query: 334 IALEMGSIDQAHAKAMLAMK------IAPRKEIFLLLAQIEQANSH 373
             L       A        +        P ++  LLLA+I +  S 
Sbjct: 655 SNLTAEEFQAAARNLEQLARFYEQTGRKPFQKHALLLAEIARRRSG 700


>gi|114327486|ref|YP_744643.1| TPR repeat-containing protein [Granulibacter bethesdensis CGDNIH1]
 gi|114315660|gb|ABI61720.1| tetratricopeptide repeat family protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 552

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 57/215 (26%), Gaps = 23/215 (10%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRYATKA 180
             + A  E +   A        +   +         +  L  E     +  +A     +A
Sbjct: 11  RARAAHREGRLEDAENAYRQAWRENQSDPAPAHLLGL--LLIE---RQEYAAAAAILRQA 65

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + ++P    +   +    +       A T       + +    + A+     +    D G
Sbjct: 66  VKLAPQDSAIQNTLAHACLKDLRHEEAETAFRNAL-HLEPNRPDYAV---GLASLLHDLG 121

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295
               +      ++    +   A         +     +A   L +     P +P+    +
Sbjct: 122 RSEEAVTLMRGAVAASPDHEAAEEALGTLCAATGALEEAVPYLTRAVLRQPDNPDLLLSL 181

Query: 296 ANIYTHL-LSENTVGKLKRALRLEEINKESVESLV 329
           A     L   E     L+RAL L         +  
Sbjct: 182 AGACKDLGRPEEAEPLLRRALAL---RPGHPTTEF 213



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 39/149 (26%), Gaps = 4/149 (2%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                  +  +        L + ++  A       L +   R      L      +G   
Sbjct: 65  AVKLAPQDSAIQNTLAHACLKDLRHEEAETAFRNALHLEPNRPDYAVGLASLLHDLGRSE 124

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A      A+  SPD     EA+            A+ +L +      +       LL++
Sbjct: 125 EAVTLMRGAVAASPDHEAAEEALGTLCAATGALEEAVPYLTRAVLRQPDNPD----LLLS 180

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI 260
            +    D G    +      +L L     
Sbjct: 181 LAGACKDLGRPEEAEPLLRRALALRPGHP 209


>gi|159900535|ref|YP_001546782.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159893574|gb|ABX06654.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 628

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 24/215 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFES----CRIGDLNSAQRYATKAL 181
            Q+  + + Y  A E   + ++  P   E+     Y E       IGD  +A+R   +++
Sbjct: 428 AQVYDSLKDYPKAIEYYSLTIEMDPNYAEY-----YNERANIYLHIGDYAAAERDYQRSI 482

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           ++SP    V   + Q Y + + + +AI   ++      + +    + L  R+      G 
Sbjct: 483 ELSPPYTEVWTNLGQCYQVQEHFEKAIGAFSRAL----DIDPKNVVALNHRAECYEGLGQ 538

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT- 300
             A+  D   SLKL  +        A       +   +   L     +   P++A +Y  
Sbjct: 539 TQAAIADYSASLKLKTSEASTFANRAILYYELGEIEASLADLNTAISLQ--PDLAELYEN 596

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             ++   + +   A           +  ++++K  
Sbjct: 597 RAVALEALERHAEAE-------HDRQQAILLAKAH 624


>gi|124268651|ref|YP_001022655.1| Flp pilus assembly protein TadD [Methylibium petroleiphilum PM1]
 gi|124261426|gb|ABM96420.1| Flp pilus assembly protein TadD [Methylibium petroleiphilum PM1]
          Length = 535

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 6/162 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A       + +      A Y+L      +  L+ A     +A+ + P        
Sbjct: 95  GRLDEAVAAYRRSVALKPDFAVAHYNLGTALKDLQQLDEAVTSLRRAVALQPGYAAAHAN 154

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +            AI               + ++    R+    D     A+     ++L
Sbjct: 155 LGAVRQAQGHLDDAIACYRAALAITPTARAHLSLASALRAHGLLD-----AAAASLRDAL 209

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE 294
            L      A     ++L  Q +   A        +++P HPE
Sbjct: 210 ALDPAYADAHNNLGETLWDQGRVDDALASYRAAHRLDPAHPE 251


>gi|134291883|ref|YP_001115652.1| cellulose synthase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134135072|gb|ABO59397.1| cellulose synthase operon C domain protein [Burkholderia
           vietnamiensis G4]
          Length = 1482

 Score = 42.2 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 82/254 (32%), Gaps = 7/254 (2%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHE 141
           +G  AL     + A  ++  A +  +    +    +  Y  Y      A +   +  A  
Sbjct: 326 RGIVALKQERFAQARSDLERASRGGNAARWRSALDSATYWFYTSSALGAQSNGDFAQAKA 385

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             E  +    +   A   L        D   A++    AL    D P     +V      
Sbjct: 386 LFERAILADPSNVTAQVLLGDALLENRDAPGAEQAYRMALRRQSDNPDAMRGLVGALAAQ 445

Query: 202 KEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                A+ F  Q    ++  A    R R+    A++ +    GD+ A+     ++L    
Sbjct: 446 GRADEALQFATQLSAEQQAKAGGLERLRSTAEAAQARQAEAHGDLGAARSLFEDALAGNP 505

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALR 316
           +     +  A+  + Q     A  +++ +    P  P+ A     LL+E T        R
Sbjct: 506 DDPWLRLDLARVYVRQGAIASARSLMDGLLAERPDMPD-ALYAGALLAEQTQDWSVGLQR 564

Query: 317 LEEINKESVESLVI 330
           LE I      + + 
Sbjct: 565 LERIAPAQRTAAMT 578



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 69/209 (33%), Gaps = 30/209 (14%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           + P A + +    ++ + + + +  L+    A    + + A +    +      +   + 
Sbjct: 413 DAPGAEQAYRMALRRQSDNPDAMRGLVGALAAQ--GRADEALQFATQLSAEQQAKAGGLE 470

Query: 159 SL--------YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            L          ++   GDL +A+     AL  +PD PW+   + + YV     + A + 
Sbjct: 471 RLRSTAEAAQARQAEAHGDLGAARSLFEDALAGNPDDPWLRLDLARVYVRQGAIASARSL 530

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS------- 263
           ++       +        L A +L      D            ++      A+       
Sbjct: 531 MDGLLAERPDMPD----ALYAGALLAEQTQDWSVGLQRLE---RIAPAQRTAAMTTLQHR 583

Query: 264 ------ICAAKSLISQNKKRKAEVILEKI 286
                 +  A  L+   ++ KA V+L + 
Sbjct: 584 LWVGQQVALATRLVRNGQQAKALVVLHEA 612


>gi|196232599|ref|ZP_03131451.1| AAA ATPase central domain protein [Chthoniobacter flavus Ellin428]
 gi|196223361|gb|EDY17879.1| AAA ATPase central domain protein [Chthoniobacter flavus Ellin428]
          Length = 452

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 48/115 (41%), Gaps = 3/115 (2%)

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL- 303
                +++ +  +++   +  A + + +    +A  + E++  ++P  PE       +L 
Sbjct: 4   LDPLRQAVAVSPDNVPLLLLLAHACLDEWSLDEARSVFERVLTLDPTRPEARVGIARILH 63

Query: 304 -SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            S  T   + R   L   N +   + ++++++    G+++ A      A+ + P 
Sbjct: 64  LSGKTSEAVVRTEALIVQNPQFAPAHLLLARLHAGEGNLEAARTSYARALALDPT 118


>gi|220919039|ref|YP_002494343.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956893|gb|ACL67277.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 970

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 12/202 (5%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLK 254
                 +++ A   L +  ++     R  A   +  +L +  +G           + + +
Sbjct: 724 ARYRLGQYAAARAELERTARDG----RMPAEAAVWYALTDVAQGRAARGRTLLEKLAATR 779

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKL 311
                  A +   ++L ++ +   AE   +         P P +A     L        L
Sbjct: 780 SPPPL--AHVALGRALEAEGRADDAEKAYQDAMTREPRAPEPALALGDLLLRRGRATDAL 837

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
               +   ++    E+   +    L  G    A A+    +   P+    L L       
Sbjct: 838 PVLEKAVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLA 897

Query: 372 SHNTDKILYWTQSALH-AMPDP 392
                +     +  L  A  DP
Sbjct: 898 ESQPAEARRAAERGLAVAPRDP 919



 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 64/226 (28%), Gaps = 7/226 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+G   +A+    +                   V     +R  T L +            
Sbjct: 727 RLGQYAAARAELERTARDGRMPAEAAVWYALTDVAQGRAARGRTLLEKLAATRSPPP--- 783

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +  +A       +G    +     +++     +   ++     L+ + +   A  +LEK
Sbjct: 784 -LAHVALGRALEAEGRADDAEKAYQDAMTREPRAPEPALALGDLLLRRGRATDALPVLEK 842

Query: 286 IWKVNPH-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              ++P  PE   A     L              +     +   +L ++S   L      
Sbjct: 843 AVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLAESQPA 902

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           +A   A   + +APR    LL          +        + AL A
Sbjct: 903 EARRAAERGLAVAPRDPALLLAGARAAQADGDRAVARALAERALKA 948


>gi|115377936|ref|ZP_01465120.1| DnaJ domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310822318|ref|YP_003954676.1| DnaJ domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115365041|gb|EAU64092.1| DnaJ domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309395390|gb|ADO72849.1| DnaJ domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 319

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 23/197 (11%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
           + L    +     +  + L  G  ++   +   A K  +      + + E    L EV+ 
Sbjct: 137 SRLTRHPYLARTHRLTELLTRGKAALDRGDFEQATKDLNQALAVDSKNREASTLLGEVR- 195

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                + N A        Q           L  E+ +  +L SA  +  KA  + P    
Sbjct: 196 -----RRNEAQRGKRDFEQ----------GL--EAEKQQNLPSALEFYRKACSLDPQHAE 238

Query: 190 VT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A      L  +W+       +  + A +    R +L    +    D      +   
Sbjct: 239 AAFRAARVSRALGADWNEQRVHAQRAVELAPDRIPQRLLL----AQILLDGKAGNIAKRH 294

Query: 249 AIESLKLCDNSIMASIC 265
             E LKL   +  AS  
Sbjct: 295 LEEVLKLDPKNAEASAL 311


>gi|148654935|ref|YP_001275140.1| hypothetical protein RoseRS_0774 [Roseiflexus sp. RS-1]
 gi|148567045|gb|ABQ89190.1| TPR repeat-containing protein [Roseiflexus sp. RS-1]
          Length = 1534

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 24/186 (12%)

Query: 130 ALAERQ-YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A    + Y  A  + E +L        A+  L   S R+G L+SA     +AL+I PD P
Sbjct: 49  AFLSNRQYEEARIEFEKVLSFDPEHIPALVGLGMTSERLGQLSSAIAAFERALEIKPDLP 108

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +   +++ Y  A  W               E+   R +  +  +   A    +  +  +
Sbjct: 109 ELRSQLLRLYTEA--W-------------GSEYAHLR-LSRVGLARLYAKGHMLPQAISE 152

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLL 303
             + +    + + A +  A++L    ++ +A  +   I     HP++        Y  L 
Sbjct: 153 FRQVVADQPDRLDARVALAEALWRDEQEEEALEVCRAILVS--HPDVLKANLILGYIELA 210

Query: 304 SENTVG 309
           S N  G
Sbjct: 211 SGNPSG 216



 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/221 (10%), Positives = 72/221 (32%), Gaps = 15/221 (6%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +     DL+ A       L+  P      + + + ++  +++  A     +       +
Sbjct: 14  RQWLESDDLDRAIGMVQHILETYPKCLEAHQMLGEAFLSNRQYEEARIEFEKVLS----F 69

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +      L+   + +   G + ++      +L++  +         +          A +
Sbjct: 70  DPEHIPALVGLGMTSERLGQLSSAIAAFERALEIKPDLPELRSQLLRLYTEAWGSEYAHL 129

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L ++        +A +Y           +    ++     + +++ V +++        
Sbjct: 130 RLSRV-------GLARLYA--KGHMLPQAISEFRQVVADQPDRLDARVALAEALWRDEQE 180

Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYW 381
           ++A       +   P   +  L+L  IE A+ + + +  YW
Sbjct: 181 EEALEVCRAILVSHPDVLKANLILGYIELASGNPSGE-QYW 220


>gi|78484985|ref|YP_390910.1| TPR repeat-containing protein [Thiomicrospira crunogena XCL-2]
 gi|78363271|gb|ABB41236.1| hypothetical protein with a tetratrico peptide repeat (TPR) motif;
           predicted membrane protein [Thiomicrospira crunogena
           XCL-2]
          Length = 516

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 17/128 (13%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A  +  +  A +     L+       A++ +   + + G++++A  +  +ALD+SP    
Sbjct: 331 AYQKNDFQQAEQHYLAALKKNPKNLTALFGMGATAAKQGEVHAALNFYRQALDVSPYNKE 390

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR---SLENADKGDMIASY 246
              AV                L      ++  ++    ++      +  +A  G   A  
Sbjct: 391 AETAV--------------AILEATLTQSEPASKRLKFMINQSPNNAKLHAALGHQYAKQ 436

Query: 247 HDAIESLK 254
            + I++ K
Sbjct: 437 KNWIKAQK 444


>gi|330892509|gb|EGH25170.1| TPR domain-containing protein [Pseudomonas syringae pv. mori str.
           301020]
          Length = 510

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 28  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 84

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 85  GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 143

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 144 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 200

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 201 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 250


>gi|330995749|ref|ZP_08319646.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329574479|gb|EGG56044.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 491

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 60/279 (21%)

Query: 141 EKLEMMLQIPATREFAVYSLYFES----------CRIGDLNSAQRYATKALDISPDAPWV 190
              E MLQ          S+Y E+              D + A      AL+I P +   
Sbjct: 19  ALYEQMLQ-------GGQSVYLEADELTDIAEYYLVQNDTDKAMACIQYALNIHPGSIDP 71

Query: 191 TEAVVQQYVLAKEWSRA---------------------ITFLNQKKKNAKEWNRNR---- 225
              + +Q +   +   A                     +     K++ A  +   +    
Sbjct: 72  LIFLARQKMFNGDIEGAKTIRDCITDPNDREVIFLNAELLLREGKEQEATTYLSEKAETE 131

Query: 226 ----AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A+     +    D G +  +      +L +  ++       A  LIS N+ ++A  
Sbjct: 132 EEDAALFAYDTATLFLDYGYLEQAAQWGQRALDMEPDNEKFLKFKADHLISSNRPKEAIE 191

Query: 282 ILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           IL  +  +NP      H  +   Y   + E+    ++ A     I++   ++L++ +   
Sbjct: 192 ILNSLLDINPYNLNAWH-SLGEAYF--VCEDFSKTMETADFALAIDEHDAQALLLKANSL 248

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLL-----LAQIEQ 369
           L+  ++D+AH   +   K  P  EI  L     L+ +E+
Sbjct: 249 LQQQNLDEAHQLYLRYFKEHPSNEIPYLFDGVCLSALER 287


>gi|323139109|ref|ZP_08074167.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
 gi|322395673|gb|EFX98216.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
          Length = 772

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 76/233 (32%), Gaps = 13/233 (5%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
               +       ++    L +   +  E  +        ++   P  R      ++    
Sbjct: 545 RAIRIEAAVALADQPADTLSKEDASRLEAAWAEYEASQRLIADRPEGRANL--GMFLLRR 602

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
                  A+  A   L + P A  ++  +   Y    + + +   L +    + +     
Sbjct: 603 GKPAEAEAEYLAG--LKLEPAAAPLSVNLADLYRGQGKEAESEQVLRKAIAISPDA---- 656

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    A  L    +     +  +   +++L  +    +     +L S  +++++  +L+K
Sbjct: 657 AAGHHALGLSLVRQRRYDEAISELGRAVELAPDESRYAYVNIVALQSLGREQESRALLDK 716

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRAL----RLEEINKESVESLVIVSKI 334
             +  P+ ++  +   L        +KRA      L E+  +  E   + +++
Sbjct: 717 ALRRFPY-DMDILQLELQDAIQAEDVKRAAPVASTLAEMAPDDAEIARLAAEL 768



 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 46/152 (30%), Gaps = 31/152 (20%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              +G    +  + +  LKL   +   S+  A     Q K+ ++E +L K          
Sbjct: 599 LLRRGKPAEAEAEYLAGLKLEPAAAPLSVNLADLYRGQGKEAESEQVLRKA--------- 649

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                                   I+ ++      +    +     D+A ++   A+++A
Sbjct: 650 ----------------------IAISPDAAAGHHALGLSLVRQRRYDEAISELGRAVELA 687

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           P +  +  +  +   +     +       AL 
Sbjct: 688 PDESRYAYVNIVALQSLGREQESRALLDKALR 719



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 67/223 (30%), Gaps = 23/223 (10%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A       SQ+           L     L   +   A  +    L++         +L  
Sbjct: 573 AAWAEYEASQRLIADRPEGRANL-GMFLLRRGKPAEAEAEYLAGLKLEPAAAPLSVNLAD 631

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                G    +++   KA+ ISPDA     A+    V  + +  AI+ L +  + A + +
Sbjct: 632 LYRGQGKEAESEQVLRKAIAISPDAAAGHHALGLSLVRQRRYDEAISELGRAVELAPDES 691

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           R   + ++A        G    S     ++L+     +       +  I     ++A  +
Sbjct: 692 RYAYVNIVALQSL----GREQESRALLDKALRRFPYDMDILQLELQDAIQAEDVKRAAPV 747

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
                        A+    +  ++         RL    K+  
Sbjct: 748 -------------ASTLAEMAPDDAE-----IARLAAELKDHR 772


>gi|291567441|dbj|BAI89713.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 715

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 12/206 (5%)

Query: 160 LYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           LY ++         + A      AL+  P+     + +     L  E+ +A     +  +
Sbjct: 12  LYQQANTYLAKQQFSEAIASCKTALEYHPNLAPAYKIIGTVEQLQGEFDQAEASYKKALE 71

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              ++    A L    + +N +    I+ Y  AIE   +  +   A    AK     N+ 
Sbjct: 72  IEPDFAEVYANLGSLFAQQN-EWQSAISFYEKAIE---IKPDFGGAYRNLAKVFGQINQP 127

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEEIN----KESVESLVIV 331
            KA   L K   + P       Y  +    +  GK  +A+ L            E    +
Sbjct: 128 NKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEIYPNVAEIHYNL 187

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
            +  +       A      A+++ P 
Sbjct: 188 GETFVNCQQWKSAITAYKQALEMNPD 213



 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 74/198 (37%), Gaps = 13/198 (6%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G+ + A+    KAL+I PD   V   +   +    EW  AI+F  +  +   ++     
Sbjct: 56  QGEFDQAEASYKKALEIEPDFAEVYANLGSLFAQQNEWQSAISFYEKAIEIKPDFGGAYR 115

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILE 284
            L    +           + +  ++++ +   +I  +  I  A++L +Q K  +A  +  
Sbjct: 116 NL----AKVFGQINQPNKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYT 171

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K  ++ P     H  +   + +     +   +    +  E+N +       +  +  E  
Sbjct: 172 KAMEIYPNVAEIHYNLGETFVNCQQWKSA--ITAYKQALEMNPDLYYVYSRLGDVFTEQQ 229

Query: 340 SIDQAHAKAMLAMKIAPR 357
           +  +A A     +K+ P 
Sbjct: 230 NYQEAIAAYQQCVKLKPD 247



 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 91/232 (39%), Gaps = 11/232 (4%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPW 189
             + +++ A    +  L+I       VY +L     +  +  SA  +  KA++I PD   
Sbjct: 54  QLQGEFDQAEASYKKALEIEP-DFAEVYANLGSLFAQQNEWQSAISFYEKAIEIKPDFGG 112

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               + + +    + ++A   L +      +  +    + +A++L+  ++G    +    
Sbjct: 113 AYRNLAKVFGQINQPNKANYCLLKAIDIEPQNIKLTEYIEVAQTLD--NQGKFTQAIALY 170

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LS 304
            +++++  N         ++ ++  + + A    ++  ++N  P++  +Y+ L       
Sbjct: 171 TKAMEIYPNVAEIHYNLGETFVNCQQWKSAITAYKQALEMN--PDLYYVYSRLGDVFTEQ 228

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +N    +    +  ++  +       + +I  + G I QA A     + + P
Sbjct: 229 QNYQEAIAAYQQCVKLKPDIDWIHFKLGEICKKQGDIKQAIAAYQKGITLQP 280


>gi|254442584|ref|ZP_05056060.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256892|gb|EDY81200.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 872

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 79/253 (31%), Gaps = 48/253 (18%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
             Q         +L   ++ALA+  Y +A +  +  L+           L   S R GD 
Sbjct: 177 RAQEFGTAPVSAFLASGELALAKHDYKLASQTFQKGLEAHPRNSELWQGLAT-SFREGDR 235

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           +    YA +AL I+P        + +  + A+ +  A   L+             A+   
Sbjct: 236 SKLIEYAERALSINPRLADTRVLIAEHLIAAESYDAAGEQLDLALIVNPLHPNALALK-- 293

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                                          A +   ++   + ++ +A  +    W+ N
Sbjct: 294 -------------------------------AVLAYLRNENERGEELRATAL--STWRTN 320

Query: 291 PHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           P  +      ++  Y       +  ++   L  E  N     + + +++  L +G  D+A
Sbjct: 321 PEVDYRIGQQLSRKY-RFEDGASSQRIALGLD-EFYNP----ARIQLAQDLLRLGLNDEA 374

Query: 345 HAKAMLAMKIAPR 357
              A    +  P 
Sbjct: 375 WRHANAVYQSDPY 387



 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 80/216 (37%), Gaps = 8/216 (3%)

Query: 177 ATKALDISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           A +  +I P       A        A+    A+ +L  ++     ++    + +   +L 
Sbjct: 103 ADRNYEIRPRLLLREAAFFSGRSDEARRQKDALGYLVNERSRRYAYDPENIVAVGKIALL 162

Query: 236 NADKGDMIAS--YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292
              +  ++    +  A E        + A + + +  ++++  + A    +K  + +P +
Sbjct: 163 FNVEPKIVLENFFRRAQE-FGTAP--VSAFLASGELALAKHDYKLASQTFQKGLEAHPRN 219

Query: 293 PEIAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            E+   + T     +    ++ A R   IN    ++ V++++  +   S D A  +  LA
Sbjct: 220 SELWQGLATSFREGDRSKLIEYAERALSINPRLADTRVLIAEHLIAAESYDAAGEQLDLA 279

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           + + P     L L  +     +  ++      +AL 
Sbjct: 280 LIVNPLHPNALALKAVLAYLRNENERGEELRATALS 315


>gi|251797283|ref|YP_003012014.1| hypothetical protein Pjdr2_3292 [Paenibacillus sp. JDR-2]
 gi|247544909|gb|ACT01928.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. JDR-2]
          Length = 294

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 9/196 (4%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     K L   P +P       Q  VL  ++ +A  ++++  K   E +    +  
Sbjct: 26  YKEALIETEKLLRDDPHSPDPYALYAQICVLMGDYEKARHWVDEALKRDPEHH----LGW 81

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             R     + G+  A +    E+L++           A  L  + K ++A+  +    ++
Sbjct: 82  YVRVSLFYETGNEAAFHEAVREALRIDPYEAHYYYLQANQLNKKGKFKEAKEQIGIALEL 141

Query: 290 NP-HPEIANI--YTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            P +P+  +I  YT  LL  + V +      L     E    L+ ++  A   G      
Sbjct: 142 EPENPQYLSILSYTEALLGNDAVSRETEREAL-RYGAEEPIVLMYLAWSAARRGDYKLHE 200

Query: 346 AKAMLAMKIAPRKEIF 361
                A+++ P ++ +
Sbjct: 201 TYMRSAVRLNPDEKQY 216


>gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
 gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
          Length = 707

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 11/117 (9%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     +AL I+PD     +      +  K +S A+    +  +   +    +A L   +
Sbjct: 351 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSA-WQAWLGRGQ 409

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEK 285
           +L+   K         A+ES     +   A+  A    A   +   +   A+  LEK
Sbjct: 410 ALDKLGKNQE------ALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALEK 460


>gi|153006387|ref|YP_001380712.1| hypothetical protein Anae109_3547 [Anaeromyxobacter sp. Fw109-5]
 gi|152029960|gb|ABS27728.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5]
          Length = 306

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 54/149 (36%), Gaps = 9/149 (6%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +      +  +G L+ A+R A  AL   P A      + + ++   +   A+        
Sbjct: 9   LVGRARAALEVGRLDEAERAARGALAAEPSAEDGHALLARVHLARGDHGEALRAAEGGVA 68

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E    + +    R+L     G    +   A E+++L  +        +  L +  K 
Sbjct: 69  ATPESEWLQRL----RALALNGMGRRKEALAAADEAVRLQPDVAPGHFVRSVILATLKKL 124

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYT 300
            +A    E+  +++P     H ++ +++ 
Sbjct: 125 PEAREAAERALELDPEDAGHHAQLGDLWL 153



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             + AL   + + A       L    + E     L       GD   A R A   +  +P
Sbjct: 12  RARAALEVGRLDEAERAARGALAAEPSAEDGHALLARVHLARGDHGEALRAAEGGVAATP 71

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++ W+                A+   ++  +   +     A     RS+  A    +  +
Sbjct: 72  ESEWLQRLRALALNGMGRRKEALAAADEAVRLQPDV----APGHFVRSVILATLKKLPEA 127

Query: 246 YHDAIESLKLCD 257
              A  +L+L  
Sbjct: 128 REAAERALELDP 139


>gi|149197815|ref|ZP_01874864.1| hypothetical protein LNTAR_04991 [Lentisphaera araneosa HTCC2155]
 gi|149139036|gb|EDM27440.1| hypothetical protein LNTAR_04991 [Lentisphaera araneosa HTCC2155]
          Length = 3353

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 85/253 (33%), Gaps = 48/253 (18%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +  L    T   +  ++Y +     ++++A       L  +P      E  +      +E
Sbjct: 552 KADLSDKETILLS--AIYDQ---SDEVDTAFEIIETKLQQNPQNELFLEQKLNLSKKHRE 606

Query: 204 WSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           W  AI  L    +     +  R + +++++   E  +      +      +         
Sbjct: 607 WDAAIATLTAITQLSPKHKATRIKDLVILSLKAEKTEDALKWIAVWKKTSASSTSPYIQE 666

Query: 262 ASI-----------------------------CAAKSLISQNKKRKAEVILEKIWK-VNP 291
           ASI                               A+ L +  K ++A+ +    W+ VN 
Sbjct: 667 ASIYRNKMDYDKSSEVLKKAMFKFPENKTMPRLLAQDLSTSGKTKEAKSVY---WRMVNK 723

Query: 292 HPEIANIYTHLLS-------ENTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             ++A     + S       ++++G+L ++     E N +S+   + ++++    G  + 
Sbjct: 724 TEDLAEKLGLVRSIIQLSQNDDSMGELTQKLQGRLENNPQSIFPPLALAELHRSSGYYED 783

Query: 344 AHAKAMLAMKIAP 356
                + A +I P
Sbjct: 784 RRKFLLKATEIKP 796


>gi|109089880|ref|XP_001086535.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 1 isoform 2 [Macaca mulatta]
          Length = 478

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 43/143 (30%), Gaps = 17/143 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y        A+  L +  +   
Sbjct: 223 LALKLQDNGQEAEGEKYLEEALANMSSQTYVFRYAAKFYQRKGSVDEALELLKKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIAS-YHDAIESLKLC-----------DNSIMA 262
                +    +   A+ ++  +  KG           + ++L                +A
Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKIDKMIRLAIFHFESAVENKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAEVILEK 285
            +  A+  I     RKAE   +K
Sbjct: 343 HLDLARMYIEAGNHRKAEETFQK 365


>gi|146303596|ref|YP_001190912.1| hypothetical protein Msed_0813 [Metallosphaera sedula DSM 5348]
 gi|145701846|gb|ABP94988.1| TPR repeat-containing protein [Metallosphaera sedula DSM 5348]
          Length = 286

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 58/141 (41%), Gaps = 18/141 (12%)

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           L+ A++        +A+  L+     + A +  A  L    K  +A  IL+K  +  P  
Sbjct: 5   LDRAEELIEENRLDEALSILRDV-ELVEAFVLRADILRRLGKVDEALRILDKGMEKFP-- 61

Query: 294 EIANIYTHLLSENTVGKLKRALRL-EEIN---------KESVESLVIVSKIALEMGSIDQ 343
                +++++  +    L+   +L E +N           S E   + +++  ++G  ++
Sbjct: 62  -----FSYVILSSKAEILESLGKLDEALNTIDEVLSIIPYSSEHRFVKARLLFKLGRYEE 116

Query: 344 AHAKAMLAMKIAPRKEIFLLL 364
           A+ +    +++ PR     ++
Sbjct: 117 ANLELAEVLRVNPRNVDARIM 137


>gi|94264704|ref|ZP_01288485.1| TPR repeat [delta proteobacterium MLMS-1]
 gi|93454870|gb|EAT05117.1| TPR repeat [delta proteobacterium MLMS-1]
          Length = 448

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 4/99 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146
           L  G  ++AA++   A        ++H  H E  +  L  + A    +Y  A    E  +
Sbjct: 35  LAAGRQAMAANDYEAAYHAFFAAFEEHPTHPE--INFLLGRAAFETGRYEEAVMAYERVL 92

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           L  P +    +  L     R+G    A++Y  + L  +P
Sbjct: 93  LSSPDSGRARLE-LARAYMRLGSGEIARQYFREVLATNP 130


>gi|332703231|ref|ZP_08423319.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553380|gb|EGJ50424.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 565

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 23/302 (7%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIP 150
           L+ + A     A++    +S+         VYL    +     +   A   L+  +++ P
Sbjct: 54  LVYLDAARAGKAQQADGALSKVLELDKRQEVYLELADLKWRLGKTEDAAVLLQDGLVRYP 113

Query: 151 ATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             +   +    +Y    R    + A       L   P          +  +  + +++A 
Sbjct: 114 GDKWLTLRLADIYRLQQR---YDGAATTLETYLAAHPSDAEALSRQARLALERERFAQAR 170

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L          +R+   +L  R+           +     ++L+     + A +  A 
Sbjct: 171 DIL-----AKLPADRHSPEVLYLRAKAEVGLAQNRKAIATLRKALEKDPTYLPAVVELAY 225

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-----RALRLEEINKE 323
            L  +N   +AE +  ++       E+    T +  +     LK     +AL L +   +
Sbjct: 226 ILELENDFAEAERVYVRLL------ELGEASTEVWIKLIDLNLKLNNPEKALSLAQSGPQ 279

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWT 382
           S   L+  + + L     D+A        +  P   ++   LA +E     N++  LY  
Sbjct: 280 SKAFLLETAHLFLGQKFYDEASEVLTPLAQQEPMDADVRFYLALLEYEGRKNSEAALYQL 339

Query: 383 QS 384
             
Sbjct: 340 TQ 341


>gi|307245597|ref|ZP_07527683.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307259007|ref|ZP_07540738.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853299|gb|EFM85518.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306867031|gb|EFM98888.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 391

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 84  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 204 SKTLEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 259

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 318

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341


>gi|298292160|ref|YP_003694099.1| hypothetical protein Snov_2184 [Starkeya novella DSM 506]
 gi|296928671|gb|ADH89480.1| Tetratricopeptide TPR_2 repeat protein [Starkeya novella DSM 506]
          Length = 372

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 7/137 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  + + A      AL   PD  +    +   Y   KE+ RA  +  +  K    +  +
Sbjct: 227 QRQKEYDEAVELLDAALRQQPDFLYPLINLGIIYAGRKEYDRADEYFARAVKQNPNYLVS 286

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           R     A      ++G +  +      ++ +  +        A       +  KA+  +E
Sbjct: 287 R----TAWGDMLIERGLLDDAVIQYEAAVLISPHDDKLQAKLADLYERTGQPEKAQEQIE 342

Query: 285 KIWKVNPHPEIANIYTH 301
           K  K+NP   I+  Y  
Sbjct: 343 KALKLNP---ISQAYLD 356


>gi|289678410|ref|ZP_06499300.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae
           FF5]
          Length = 508

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 38/227 (16%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---- 216
           Y  +  +G   SA   A      +P       A   Q   A  +  ++ ++ +  +    
Sbjct: 25  YQIAEYMGADQSALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGD 84

Query: 217 ----------NAKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAI 250
                        + +    +L                +  ++L     GD   S    +
Sbjct: 85  THFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-L 143

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENT 307
           E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E  
Sbjct: 144 EDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQN 201

Query: 308 V--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                  +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 202 RMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 248



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 74/205 (36%), Gaps = 7/205 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    + ++  N   A K  S    +        +YL+E +   +  Q +   + L   L
Sbjct: 292 LRQADILVSNGNGAEAAKRLSEARAEE-PDYAVQLYLIEAETLTSNDQLDRGWQVLNQAL 350

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206
           +        +Y+    + +  DL   ++     +   P+      A+          ++ 
Sbjct: 351 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYTE 410

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   + +  K + +       +L +    N   G++  +     ++L+   +  +A+   
Sbjct: 411 ARELIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 465

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291
            + L ++ ++R+A+ +  K  +  P
Sbjct: 466 GEVLWAKGEQREAKKVWAKALEQQP 490


>gi|256419985|ref|YP_003120638.1| hypothetical protein Cpin_0939 [Chitinophaga pinensis DSM 2588]
 gi|256034893|gb|ACU58437.1| hypothetical protein Cpin_0939 [Chitinophaga pinensis DSM 2588]
          Length = 287

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEIN 321
            A    I++ +  +A  +L +  ++NP  +   I     ++ +   +  +++   +   N
Sbjct: 143 HAEDPAIAKWESSQAISLLGQAIELNPKNDSLKIKQALLYMNTGEPMVGVQKLRDVVAAN 202

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANS 372
            ++ E+ + ++ +A++    D+A  +     +  P   +   +LA+  +   
Sbjct: 203 PDNAEAQITLANLAIQSNQFDKAIERMESFTQKHPDEAKAVFVLAEAYRGKG 254


>gi|91775034|ref|YP_544790.1| tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
 gi|91709021|gb|ABE48949.1| Tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
          Length = 562

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 87/271 (32%), Gaps = 7/271 (2%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A+     +++      A       +       E++   L  +IA    Q+++A      +
Sbjct: 8   AIVVAYAAVSLGMGTAAGAATKTENPSPALTGEFVYKYLIGEIAGQRGQFDLASALFLDL 67

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +       A  +    +    D  +A   A+    + P +    +A+ Q  +   + + 
Sbjct: 68  AKTSQDSRLAERA-AKTAVMGNDGRTAIDAASLWSQLDPSSAEAHQALTQMLINTGKLNE 126

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L     N +        L    S +     +  A      E  +   +   A    
Sbjct: 127 AKPHLRALLANEEGRAGGFMFLNNLLSRQQ----NKAAVLSLVQELARDYPDLPEAHFAI 182

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKES 324
           A +  +      +   L +  K+ P  E+A +     LL ++    +         N  +
Sbjct: 183 AHAAWNAGNIDLSLNELSQADKLRPGWEMAALMRGQVLLGKSPAEAVAFYRSFLSTNTGA 242

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            E  + +++I       D+A A+ +  ++ A
Sbjct: 243 NEVRLALARILAGQKKFDEAKAEFIKLIEAA 273



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 87/278 (31%), Gaps = 23/278 (8%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL +Q          A +  +  L        +  +Y L   + R  +   A ++ +K  
Sbjct: 285 LLSLQANEL----PDAEKYFKEALGKGFKDKDQLYIY-LGQIAERKRNDEEALQWYSKVA 339

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                       V            AI  L    K+  +  R   +   A  L  A +  
Sbjct: 340 PGEVRYVDAQLGVANVISRRDGIDAAIQSLE-NLKDLTDAQRAAIVHAQANVLTQAKRYQ 398

Query: 242 MIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
              +   +AI +L      +     AA+ +   +   +    L K+      P+ A  Y 
Sbjct: 399 EAYARLENAINTLPNSPELVYDFAMAAERINKLDVMERELRKLIKM-----QPDFAQAY- 452

Query: 301 HLLSENTVGKLKRA-------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + L  +   +  R         +  E++ +    L  +  +   +G +D+A      A  
Sbjct: 453 NALGYSLADRNIRLDEAKAMIEKAHELSPDDHYILDSLGWVYYRLGDLDKALEYLRRAYA 512

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             P  EI   L ++        + +  W   AL A P+
Sbjct: 513 QQPDPEIAAHLGEVLWKQGKRDEAVKTWEA-ALSAFPE 549


>gi|323492365|ref|ZP_08097518.1| putative Zn-dependent protease [Vibrio brasiliensis LMG 20546]
 gi|323313412|gb|EGA66523.1| putative Zn-dependent protease [Vibrio brasiliensis LMG 20546]
          Length = 484

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 13/161 (8%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A++W          +   K     +A     ++L + D  ++  +       +K   N+
Sbjct: 289 AAQDWF--------NRTEKKAAPSVKAAFQYGKALVHLDNKELDQASSILNNLIKQQPNN 340

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTH--LLSENTVGKLKRALR 316
                  +   I+Q++  KA+ +LEK  +  P+  +  I Y +  +  +     +K   R
Sbjct: 341 RFYLDALSDLYIAQDQANKAQSMLEKALQSAPNNAVLTINYANSLVKQDKNSEAVKVLQR 400

Query: 317 LEEINKESVESLVIVSKIALEMG--SIDQAHAKAMLAMKIA 355
               N E V    ++S+ ++ +G    D A    +LA+K  
Sbjct: 401 YTHDNPEDVNGWHLLSEASIHLGLSDEDLAARAEILALKAN 441


>gi|309792081|ref|ZP_07686555.1| TPR repeat-containing transcriptional regulator LuxR
           [Oscillochloris trichoides DG6]
 gi|308225888|gb|EFO79642.1| TPR repeat-containing transcriptional regulator LuxR
           [Oscillochloris trichoides DG6]
          Length = 845

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 15/179 (8%)

Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           V LL  Q    E     A   L    +  P+ +   +      +   G    A   A +A
Sbjct: 423 VALLRGQFHQIEPYLAAAQASLSHATVAQPSLQATMLTLQANLAQMRGQTGEALALAEEA 482

Query: 181 LDISPDAPWVTEAVVQQ-----YVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARS 233
             I+P       A++          A +++ AI  L +  +  ++   +    + +   +
Sbjct: 483 RRIAPVGDLRLSALIALALGATQRQAGDFASAIVQLQRAIQTGQQIGDHVTAMLAVAHLA 542

Query: 234 LENADKGDM---IASYHDAI---ESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285
           L     G +   +    DA+   E+ K     + A   A A+      +   A   L++
Sbjct: 543 LLTLQSGQLRFFVRIAEDAVAQTEAQKTAPFMVGAVHIALAQVYYEWGRVAAARETLQR 601


>gi|307254553|ref|ZP_07536387.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306862490|gb|EFM94450.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
          Length = 338

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 31  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 90

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211
           ++  L     +  +   A   A K + I P     P              ++    ++ L
Sbjct: 91  SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 150

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270
           ++  + + +  R   +L      +N  +     +  +    L+   + I   I   K+  
Sbjct: 151 SKTLEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 206

Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326
           +++N     E+ L +  ++  H    ++A   Y            K   +L +       
Sbjct: 207 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 265

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351
              I  +  +      +A    ML 
Sbjct: 266 HRFIHYQ--INEAEEGRAKESLMLL 288


>gi|262304987|gb|ACY45086.1| acetylglucosaminyl-transferase [Endeis laevis]
          Length = 288

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 49/160 (30%), Gaps = 6/160 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   +    +    H + L  L    I   +     A +  +  L +      A  +L  
Sbjct: 39  AEDCYGTALRLCPSHADSLNNL--ANIKREQGFTEDATKLYQKALDVFPEFAAAHSNLAS 96

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              + G LN A  +  +A+ I P        +       ++   A+    +  +    + 
Sbjct: 97  VLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF- 155

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
              A      +  + D G++  +      +LKL      A
Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDA 192



 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A        +       + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVQDAEDCYGTALRLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +     ++L +      A    A  L  Q K   A +  ++  ++ P    A+
Sbjct: 66  EQGFTEDATKLYQKALDVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187


>gi|218887207|ref|YP_002436528.1| hypothetical protein DvMF_2117 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758161|gb|ACL09060.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 207

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
            + GDL+   RY  +A         PW     V       E   AI  L +  K   ++ 
Sbjct: 71  LQRGDLDGCLRYNEEAAQCRAKFPVPWSNIGFVHLQ--RGEPEEAIKALKKALKWDPDFI 128

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +  A +  A  ++    GD  AS   + E++K       A    A +   + +  +A  
Sbjct: 129 QAMATMGAAYFMQ----GDYEASIQISREAIKREPGFGPAYNNLALAHFERGEFAQAVQ 183



 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 4/123 (3%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  +A+     A+  SP        +    +   +    + +  +  +   ++     + 
Sbjct: 41  DFVAAEESFLSAVRNSPRLGEAYVQLGGICLQRGDLDGCLRYNEEAAQCRAKFP----VP 96

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                  +  +G+   +     ++LK   + I A      +   Q     +  I  +  K
Sbjct: 97  WSNIGFVHLQRGEPEEAIKALKKALKWDPDFIQAMATMGAAYFMQGDYEASIQISREAIK 156

Query: 289 VNP 291
             P
Sbjct: 157 REP 159


>gi|254410362|ref|ZP_05024141.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196182568|gb|EDX77553.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 560

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +Y  A    +  L+I     +A     +       G    A     KAL+I PD  +  
Sbjct: 379 GRYEEAIASYDKALEIQPDDYYAWYFRGIALSYL--GRYEEAIASYDKALEIQPDDYYAW 436

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                       +  AI   ++  +   ++    +      +L    +     +     +
Sbjct: 437 YFRGIALSYLGRYEEAIASYDKALEIKPDYQSGWS--HRGNALSFLKR--YEEAITSYEK 492

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +LK   +   A    A     Q     A   L++  K+NP
Sbjct: 493 ALKFKPDYHYAWYFKACCYALQGNVDLAIENLQQAIKLNP 532



 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 12/129 (9%)

Query: 134 RQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISP--DAPW 189
            +Y  A    +  L+I     +A     +       G    A     KAL+I P   + W
Sbjct: 413 GRYEEAIASYDKALEIQPDDYYAWYFRGIALSYL--GRYEEAIASYDKALEIKPDYQSGW 470

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                       K +  AIT   +  K   +++          +L+    G++  +  + 
Sbjct: 471 SHRG--NALSFLKRYEEAITSYEKALKFKPDYHYAWYFKACCYALQ----GNVDLAIENL 524

Query: 250 IESLKLCDN 258
            +++KL  +
Sbjct: 525 QQAIKLNPD 533


>gi|170695081|ref|ZP_02886229.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
 gi|170139933|gb|EDT08113.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
          Length = 539

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 48/168 (28%), Gaps = 6/168 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G ++    +   A       S++       L +    Q+    ++ + A   LE  L   
Sbjct: 63  GYIAAQQGDHARAADYLIQASERALLSWHQLKF--AAQVCRLAQRRDAAIALLERCLAQC 120

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A++ +      +G+   A         + P                  +   +  
Sbjct: 121 RNDAAALHGVAVSLIELGESQRALEVFVHLCKVHPQLAEAHYNRGTLLGTMGRYDDELDA 180

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             Q       + R  A + +  +L +  + D   +     ++L +  N
Sbjct: 181 YRQAIALKPRFVR--AYVNLGVALRDLRRFD--EALLQFRKALSIDPN 224


>gi|172064642|ref|YP_001812292.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
 gi|171998127|gb|ACB69043.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MC40-6]
          Length = 611

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 49/161 (30%), Gaps = 4/161 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 +   A +      +I  +      +L     +  D N+AQ YA +AL   P+  
Sbjct: 149 ALHLANRLPEARDAYLRCERIKPSYPQLRNNLSALHLQQEDYNAAQFYAKEALAEDPNNA 208

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   ++   E   A   L +    A     + A  L A S    ++     +   
Sbjct: 209 SAWSLLGSSHLKRAELDAAECALERALVLAP----HDARSLQAYSYICKERQRWSQAMEL 264

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             ++ +L           A   + Q +  +     E  W+ 
Sbjct: 265 IEQANRLKPQDGSIQWSIAMLQLLQGQYEQGWRNHEARWRA 305


>gi|110597030|ref|ZP_01385319.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
 gi|110341221|gb|EAT59686.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
          Length = 654

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 22/262 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                  + ++  A    + +L        A++     + + GDL  A     +AL+I P
Sbjct: 7   RAYALHMKGRFEDAFALYQSVLSRNPLHFDALHLSGVIAAQTGDLLRAAELIKRALEIDP 66

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   +            AI   ++            A     R+L   D      +
Sbjct: 67  RHINALNNLGYVLRGLGRMESAIEMHDRAL----LLESGHADHWYNRALALHDLARFEEA 122

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                ++L L  +   A      +L +  +  +A    E+   +NP    +    H    
Sbjct: 123 VGSFRQALSLKPDFADAWNMLGAALNALTRHEEALECYERSIALNP----STAAAHNNRG 178

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
             +  L+R            E L    +  AL  G +   + +A+  M +   +E    L
Sbjct: 179 VALNDLERF----------AEGLRSCEQALALHAGDVTAWNNRAISLMGLDRHEEA---L 225

Query: 365 AQIEQANSHNTDKILYWTQSAL 386
           A   +A + +      WT   +
Sbjct: 226 ASCMKAIALDQGSAEAWTLQGV 247


>gi|88792532|gb|ABD52285.1| polysaccharide deacetylase [Xanthomonas campestris pv. glycines]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L    K++    R RA L   R L+   +   + +     E+LKL  +  +A+   
Sbjct: 765 ATLVLPAAVKSSD---RQRAQLANERGLQLYKEKRYVDAAEQFDEALKLRPDFALAANNL 821

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGK 310
                 Q +  ++   LE   K++P   +A     + Y     +    +
Sbjct: 822 GFVYYRQGRFAESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKAR 869


>gi|322709271|gb|EFZ00847.1| 20S cyclosome subunit (BimA/Nuc2/Cdc27), putative [Metarhizium
           anisopliae ARSEF 23]
          Length = 840

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 92/268 (34%), Gaps = 20/268 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDIS 184
           Q A     Y  A +    M     +R   +    ++ +   R  DL+     A + +D +
Sbjct: 553 QAA-----YAEAEKFFRRMRVQAPSRLQDMEVYSTILWHLKRETDLS---FLAHELVDSA 604

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             +P    A+   + LA++  +A+    +  +   ++    A     +  E+    +   
Sbjct: 605 WHSPQAWCALGNAWSLARDPEQALRCFKRATQLDPKF----AYAFTLQGHEHVTNEEYDK 660

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +     +++        A     +         KA         +NP+  +       + 
Sbjct: 661 ALTAYRQAIAADRRHYNAYYGIGRVQERLGAYEKAYDHYYAAQTINPNNAVLICCMGGVL 720

Query: 305 ENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360
           E     V  L    +  E+   + ++    ++  L +G I+ A  + M+   +AP    +
Sbjct: 721 EKQKQMVQALHAYTKAAELAPRAAQTRYKKARALLTVGQIEAAQKELMILKDLAPDEATV 780

Query: 361 FLLLAQIEQANSHNTDKILYWT-QSALH 387
             LL  + ++ +     + ++T   AL 
Sbjct: 781 HFLLGTLYRSTNERQLAVRHFTIALALD 808


>gi|237708471|ref|ZP_04538952.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237723945|ref|ZP_04554426.1| TPR repeat-containing protein [Bacteroides sp. D4]
 gi|229437609|gb|EEO47686.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
 gi|229457400|gb|EEO63121.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 284

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              LNQK    +++ +++NR           L AR+    +      +  D  E+ KL  
Sbjct: 178 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 237

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295
           +     +   +  +SQ KKR+A V  EK  ++  P PE+
Sbjct: 238 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 276


>gi|146328222|emb|CAM58138.1| hypothetical protein [uncultured marine microorganism]
          Length = 548

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 68/209 (32%), Gaps = 34/209 (16%)

Query: 190 VTEAVVQQYVLAKEWSRA--ITFLNQKKKNAKEWNRNRAILLI--ARSLENADKGDMIAS 245
              A V+  +  ++W  A  +  L   +K    +    A+ L   AR++  A  G +  S
Sbjct: 337 AGAAPVRYAMERRDWEAAASLEPLEAAEKAGGNYEVRNAVALRYWARAVGAAKSGYIEQS 396

Query: 246 YHDAIESLKLCDNSIMASICAAK-------------SLISQNKKRKAEVILEKIWKVN-- 290
             D IE  +L      A    A+               +++++  +A  ++    K+   
Sbjct: 397 ERDLIELERLAKEMASAERVWARNTAEVFRLQATAWLALAKDESDRALELMRAAAKLESE 456

Query: 291 -------------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
                         H ++ ++   L        L               + +  ++ A +
Sbjct: 457 TDKSGLSPGRALPAHEQLGDMLAEL--GRPQAALAEYEASMSQAPRRFNTYLGAARAAND 514

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            G  + A       +++A  +   + LA+
Sbjct: 515 AGKPEIARDYYGKLLELASEESSRVELAE 543


>gi|110596792|ref|ZP_01385082.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
 gi|110341479|gb|EAT59939.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
          Length = 466

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 71/203 (34%), Gaps = 11/203 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
              +     +   A E     L+       A+Y+L      + D + A     + ++I+ 
Sbjct: 245 RANVLAITGRIEEAAESYIKTLEQEPDDINALYNLGIAYEELEDYSEAVHCYRRCIEINS 304

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +      A+   +   +E+  AI+ ++Q      E        L+ ++    +  D+  S
Sbjct: 305 EFTDAWFALACCHEALEEYEEAISAIDQALTALPESIE----FLLLKAEIEYNLNDLENS 360

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300
                E + +   S    +  A  L        +   L++  K+ P     H EIA  Y 
Sbjct: 361 ISTYREIIMIDPESPQIWVDFAMVLREAGDVNASIDALQQSLKLQPFSAEAHFEIAAAYF 420

Query: 301 HLLSENTVGKLKRALRLEEINKE 323
            +   + +  LK   +  +I+ +
Sbjct: 421 AM--GDKLSTLKALSKAFKIDPD 441


>gi|46579994|ref|YP_010802.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449410|gb|AAS96061.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234007|gb|ADP86861.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           vulgaris RCH1]
          Length = 562

 Score = 42.2 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 71/198 (35%), Gaps = 14/198 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GDL +A R A +  +  P+     E   Q  V       A+  +++      +     
Sbjct: 359 EKGDLEAALRTAREGRETFPEQRDFREMEAQLLVNMGRSEEALRVIDKAADRWPD----D 414

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILE 284
           + LL  R+L   D+G   A++    E +K   N   A      +L  Q     +A  +LE
Sbjct: 415 SGLLFMRALILDDRGAKDAAFAAMEEVIKASPNHAQALNYVGYTLAEQERDLTRAVSLLE 474

Query: 285 KIWKVNP-HP----EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +   ++P +P     +A  Y            + RA+ L   +    E       IA  M
Sbjct: 475 RANTLSPDNPFILDSLAWAYFKAGRIPEAWKAISRAIELNAPDPIIWEHY---GDIATAM 531

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G  + A      A+ + P
Sbjct: 532 GQKNTARRAYRKALSMNP 549



 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 30/241 (12%)

Query: 155 FAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             +  L  ES       D   A   A  A    P      + + Q  V  + +  A    
Sbjct: 113 LGLTLLLAESYLDLDRNDEAIALLRAYNA--KHPKDDEARQELAQLLVKTRRYEEA---- 166

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
             K   +       ++L    +        +  +     +++K   + + A    A    
Sbjct: 167 -DKLILSIGETSRTSLLRYYHARALMGLNRLTEATAQLRKAVKASPDFLEAWAELAYVYE 225

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIA------NIYTHLLSENTV--GKLKRALRLEEINKE 323
            +    +AE I E+         +A      +++  L++ N      +K    L     E
Sbjct: 226 LRKNYVEAEKIYEQ--------ILALDEGNQDVWLRLVAINIKLNNPVKAYE-LARQGPE 276

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYW 381
           +   ++  + + L+    +QA    +LA+K +P   +E++  LA +      +TD  L W
Sbjct: 277 TFGFMLTAATLFLDDRFFEQA-EGLLLAVKDSPGAPEEVYFFLAVLAYEGQRDTDATLSW 335

Query: 382 T 382
            
Sbjct: 336 L 336


>gi|312880768|ref|ZP_07740568.1| serine/threonine protein kinase with TPR repeats [Aminomonas
           paucivorans DSM 12260]
 gi|310784059|gb|EFQ24457.1| serine/threonine protein kinase with TPR repeats [Aminomonas
           paucivorans DSM 12260]
          Length = 516

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 1/84 (1%)

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A       + +  G L         +        ++++I L     D A  +A  A+ +
Sbjct: 396 LARAQARWSAGDEAGALAILEEAVRSSPRDPSPHRMLARIHLARRRFDAAAQEARRALDL 455

Query: 355 APR-KEIFLLLAQIEQANSHNTDK 377
           APR      L AQ  +    N + 
Sbjct: 456 APRDAPALFLAAQAAEGQGRNEEA 479



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A  Q    A + + A+  L +  +++        +L    +  +  +    A+  +A  +
Sbjct: 397 ARAQARWSAGDEAGALAILEEAVRSSPRDPSPHRML----ARIHLARRRFDAAAQEARRA 452

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           L L      A   AA++   Q +  +A+  L++
Sbjct: 453 LDLAPRDAPALFLAAQAAEGQGRNEEAQSFLQE 485



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 4/123 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q   +      A   LE  ++           L          ++A + A +ALD
Sbjct: 395 LLARAQARWSAGDEAGALAILEEAVRSSPRDPSPHRMLARIHLARRRFDAAAQEARRALD 454

Query: 183 ISPDAPWVTEAVVQQYVLAKEW--SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           ++P         +       +     A +FL +       +   +A+    R  +  + G
Sbjct: 455 LAPR--DAPALFLAAQAAEGQGRNEEAQSFLQELLSRDATYPGAQALWERLRQGDPGETG 512

Query: 241 DMI 243
           + +
Sbjct: 513 NPL 515


>gi|303248555|ref|ZP_07334812.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio fructosovorans JJ]
 gi|302490085|gb|EFL50006.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio fructosovorans JJ]
          Length = 800

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 5/155 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                ARK      + +  H   L+ L   +++  ++++  A +  +  +  P      +
Sbjct: 648 GENAAARKAFQKCLRANPGHIYSLLRL--GRMSEEDKRFTTALKYYKRAMAAPGGAPLTL 705

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L   + + G    A+ +  +AL   P        + + Y+   +   AI     ++  
Sbjct: 706 RHLARLAFKRGRNEEAREHLHQALLHDPKDAVSLHLMAKLYLKEGQ-DPAIAEAMARQAV 764

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A    R      +AR+L    +G    +      +
Sbjct: 765 ALRPERTEFWQALARALT--AQGRDGEARDALARA 797



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 65/218 (29%), Gaps = 34/218 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A  + + ++   A    A+Y+L     R+G+  +A++   K L  +P   +    
Sbjct: 614 GRLDTARAEFDRVIGRDAKNTMALYNLGCVCRRLGENAAARKAFQKCLRANPGHIYSLLR 673

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + +     K ++ A+ +  +             + L   +     +G    +     ++L
Sbjct: 674 LGRMSEEDKRFTTALKYYKRAMAAPGGAP----LTLRHLARLAFKRGRNEEAREHLHQAL 729

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                  ++    AK  + + +                 P IA                 
Sbjct: 730 LHDPKDAVSLHLMAKLYLKEGQD----------------PAIAEAMA------------- 760

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             +   +  E  E    +++     G   +A      A
Sbjct: 761 -RQAVALRPERTEFWQALARALTAQGRDGEARDALARA 797


>gi|121593320|ref|YP_985216.1| hypothetical protein Ajs_0898 [Acidovorax sp. JS42]
 gi|120605400|gb|ABM41140.1| TPR repeat-containing protein [Acidovorax sp. JS42]
          Length = 599

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 63/219 (28%), Gaps = 14/219 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQ---IALAE--RQYNIA 139
           +AL    +     +  +A K   Y   +      E    LL  Q    AL     + + A
Sbjct: 345 RALTQAYLM----HAQVAEKRGDYAGAEGWLSRIEDAAELLTAQSRRAALLARQGKLDEA 400

Query: 140 HEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
              +  +    P      + +             A     KA+ ++P    +        
Sbjct: 401 RALIRAVPASTPDQERLKLQAEAQLLREAKQYAQAYTVLGKAVALAPADNDLAYDQAMLA 460

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             A         L        +++     L  + +        +  +    +++L+   N
Sbjct: 461 EKAGRLDDMERLLRAIIARQPDYHHALNALGFSLA---ERGVRLEEAKALIVKALEFAPN 517

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
               +            +++A  IL++ ++  P  EIA 
Sbjct: 518 DPFITDSLGWVEFRLGNRQEALTILKRAYETQPDAEIAA 556


>gi|320103773|ref|YP_004179364.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319751055|gb|ADV62815.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 1626

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 20/276 (7%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLY 161
           R   +  + ++T +N  +     V+ AL   Q+  A +  E + +             + 
Sbjct: 292 RFAIAEAAVKNTLNNPTITRR-AVKAALDVGQFETASKLFEGIHKGSDNDAELLYFQGVL 350

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             S R   L  +      A+   P       A +            I         A   
Sbjct: 351 ASSQRR--LERSLELLNAAIAKDPGLLDAHAARLAVLASDPTTRGQIDEAVSAMLAANPG 408

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              RA L+   + +     +   +  +   + +L        +  A+  I  N+   A  
Sbjct: 409 Q-ARAHLI---AHQIYRGINPDRAQIEIERAGELEPLHPEVVLTRAREAIKANQIASAIA 464

Query: 282 ILEKIWKVNPHPE-----IANIYT-HLLSENTVGKLKRALRLEEINKESVESL---VIVS 332
           ++++ W V P  +     +A++Y      E  +  L+RA++    +    ESL    +V+
Sbjct: 465 LIQQGWNVQPMDDRLPVLLASLYVSEGKPELAIDVLERAMKSLSFSIPIRESLADTYLVA 524

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQ 366
               ++     A  K+   +  +     +   L+A+
Sbjct: 525 NRLDDLDKFLAAWPKSDNPLNESAKDYMKALALVAR 560


>gi|307168705|gb|EFN61737.1| Transmembrane and TPR repeat-containing protein CG4050 [Camponotus
           floridanus]
          Length = 980

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 27/240 (11%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  P+   
Sbjct: 573 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 628

Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  ++Q+   A+    A   L +  +  K+ N  R    +   +   D  D  ++ 
Sbjct: 629 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 684

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299
                ++ L ++   A    A  L  + +  +A   L +   V  HP+       + +IY
Sbjct: 685 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 742

Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             ++   +      R  R+ +++  +++ L  +  + +E G +  A      A  +AP +
Sbjct: 743 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLEHAAALAPHQ 800


>gi|197128015|gb|ACH44513.1| putative tetratricopeptide repeat domain 1 variant [Taeniopygia
           guttata]
          Length = 278

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              ++  A     +  +     + ++RA+L   R+     +    A+  D  ++++L  +
Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173

Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285
            I A +  A+      K  +A      +LEK
Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKTVLEK 204


>gi|153012222|ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicago truncatula]
          Length = 163

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 5/103 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSA 173
             E   Y  +   A +E  Y  A     E M     P  R + +Y++       G+   A
Sbjct: 32  EKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKA 91

Query: 174 QRYATKALDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQK 214
             Y  +AL+ +P  P      AV+  Y+   +   A ++ +Q 
Sbjct: 92  LEYYFRALERNPFLPQAFNNMAVICHYIRQGDSEIAESWFDQA 134


>gi|119629447|gb|EAX09042.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_c [Homo sapiens]
          Length = 612

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568


>gi|17511700|gb|AAH18707.1| TMTC4 protein [Homo sapiens]
          Length = 395

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 243 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 298

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 299 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 351


>gi|332706283|ref|ZP_08426351.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354988|gb|EGJ34460.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1611

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 20/121 (16%)

Query: 159  SLYFESCR---IGDLNSAQRYATKALDISPDAPW---------VTEAVVQQ---YVLAKE 203
             L  +  +    GD+  A     +A + + D  +            A ++Q        +
Sbjct: 1389 GLVKQGEKLAKEGDVEGAIAKFKEAQEWNSDLEFDPEKKAKQLAARAKLEQGDKLAEEGD 1448

Query: 204  WSRAITFLNQKKKNAKEWN-----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
               AI    + ++   +       + RAI  + +  + A KG +  +     ++ KL  N
Sbjct: 1449 VDGAIAKFKKAQEWNSDLEFDPEEKARAIAKVKQGEQLARKGQLTKALSLYKQAQKLDPN 1508

Query: 259  S 259
             
Sbjct: 1509 L 1509


>gi|325928005|ref|ZP_08189223.1| tetratricopeptide repeat protein [Xanthomonas perforans 91-118]
 gi|325541619|gb|EGD13143.1| tetratricopeptide repeat protein [Xanthomonas perforans 91-118]
          Length = 412

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  +    +LY    +   L  A+     
Sbjct: 163 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQVSEARLRTASALYELGRKPEALAEARALQGD 222

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 223 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 278

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 279 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 338

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 339 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 394

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 395 RLDPDNRAL 403


>gi|300718975|ref|YP_003743778.1| cellulose synthase operon protein C [Erwinia billingiae Eb661]
 gi|299064811|emb|CAX61931.1| cellulose synthase operon protein C [Erwinia billingiae Eb661]
          Length = 1269

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 76/245 (31%), Gaps = 30/245 (12%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             + G      G  ++ + ++  A+   + V Q +    + L  L    +A     Y  A
Sbjct: 263 RKNAGGAEKGQGFTALNSGDVSGAQSAFNQVLQANPEDADALAGL--GYVAQRNGNYAAA 320

Query: 140 HEKL------------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDIS 184
            + L            + M Q    R +A  +   ++ + G+   A   +    +A    
Sbjct: 321 ADYLDRAAKQGGENSQQRMTQAADARFYAQLATAQQAMKAGNTAQALSLSEPLTQADGEK 380

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             +  +  A       + +   A     +    +   NR     L     +     +   
Sbjct: 381 GVSAKLFRA--DVQRRSNQLDAAEQT-YRSVIQSDPDNRPAKEGLFYVLRQQNRGAEANT 437

Query: 245 SYHDAIESLKLCDNSIMASI-----CAAKSLISQNKKRKAEVILEKIWKVNPH-P----E 294
                 ES++       A         AK  ++    ++A  IL++  +  P  P    +
Sbjct: 438 LLSSLPESVRESVTPKPAVTSDPVRRQAKQALAAGNTQQAIAILQQGTQRFPTDPWLRLD 497

Query: 295 IANIY 299
           +A IY
Sbjct: 498 LARIY 502



 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 8/67 (11%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++A+H++P A+ + + +  + T        LL  ++A A+  +  A       L+    
Sbjct: 757 VALASHDLPKAKGLVAGLRGEQTPER----LLLMARVAEADGDHQQALAY----LRTARG 808

Query: 153 REFAVYS 159
           +   +  
Sbjct: 809 KMIGLEG 815


>gi|171685644|ref|XP_001907763.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942783|emb|CAP68436.1| unnamed protein product [Podospora anserina S mat+]
          Length = 815

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 82/247 (33%), Gaps = 21/247 (8%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYAT 178
           L  +   Q   A   Y  A +    +  +  TR     VYS      R     S    A 
Sbjct: 524 LARMGRAQYEQA--NYAEAEKLFRRLRMLAPTRHEDMEVYSTVLWHLRKETDLS--FLAH 579

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           + +D   D+P+   A+   + LA +  +A+    +  +   ++    A     +  E+ +
Sbjct: 580 ELVDAVWDSPYAWCALGNAWSLACDHEQALRCFKRAIQLHPKF----AYAYTLQGHEHVE 635

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             +   +     +++        A     K         KA    +    +  HP+ A +
Sbjct: 636 NEEYDKALTAYRQAISADKRHYNAYYGIGKVFEKLGNWDKALSHYKAALVI--HPDHAVL 693

Query: 299 YTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +     + + K+         R  E+   + E     ++  +  G  ++A  + ++ 
Sbjct: 694 ICCV--GTVLQRQKQIGQALPYFSRAVELAPRAPEIRHKKARALMATGQFEEAQQELLVL 751

Query: 352 MKIAPRK 358
             +AP K
Sbjct: 752 RDLAPDK 758


>gi|60219539|emb|CAI56780.1| hypothetical protein [Homo sapiens]
          Length = 430

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 28  QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 87

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 88  LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 146

Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
              + +   A+ M          +A  + +  +   P     +  L  +   +  + +  
Sbjct: 147 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 203

Query: 379 LYWTQSALHAMPD 391
             W + A+    D
Sbjct: 204 EIWMKKAIKLQAD 216


>gi|33862553|ref|NP_894113.1| SAM-binding motif-containing protein [Prochlorococcus marinus str.
           MIT 9313]
 gi|33640666|emb|CAE20455.1| SAM (and some other nucleotide) binding motif:TPR repeat
           [Prochlorococcus marinus str. MIT 9313]
          Length = 774

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 67/203 (33%), Gaps = 22/203 (10%)

Query: 133 ERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           +   N A +  +      L  P        +        G+++ A     +++ + P   
Sbjct: 37  QGNINEAQKAYQEFINSGLSDPDV----FSNFALICQSQGEIDKAINIYKRSIKLFPRHA 92

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           +   A +            +       + A     N A       L   +KG +  +   
Sbjct: 93  FSH-ANLGYLFFQ---IGMLDDAEAAIRQAIVIQPNLANAYSYLGLVLREKGRLTDAEDI 148

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305
             ++++L  + + A +   + L +Q K  +AE    +  ++    + A+IY +L      
Sbjct: 149 TRKAIELQPDLVDAYVNLGQILQNQGKLDEAEHTTRQAIELQD--DSASIYLNLGGILQD 206

Query: 306 -----NTVGKLKRALRLEEINKE 323
                +     ++A+ L+    +
Sbjct: 207 QGDLTDAEANTRKAMHLQADLPD 229


>gi|224058285|ref|XP_002194126.1| PREDICTED: similar to tetratricopeptide repeat domain 4
           [Taeniopygia guttata]
          Length = 330

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 6/123 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G+  SA   A +A  + P           +Y   K++ RA+   ++  +        
Sbjct: 1   MALGNYRSALNDAIQAKKLKPTHLKA-IIRGNEYFKEKDYGRAVAAYSEGLRRRCGDAGL 59

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+LL  R+  +   G+  ++ +DAI++ KL    + A I  A   +      +A     
Sbjct: 60  DAVLLTNRAAAHFHLGNYRSALNDAIQAKKLKPTHLKAIIRGALCHMELKNFVEAI---- 115

Query: 285 KIW 287
             W
Sbjct: 116 -AW 117


>gi|220906314|ref|YP_002481625.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219862925|gb|ACL43264.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 331

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 30/192 (15%)

Query: 81  YDKGYKALYT----------GLM-----SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125
            +KGY+A+            GL+      + A    +   +           +     +L
Sbjct: 92  QEKGYQAVLQREPDNVTALEGLVNTRLEMVQAGYAKIPTVIEPLEKLAKAKPDRTDYLVL 151

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY--------A 177
             Q          A +  + +L        A+  +     +     +A           A
Sbjct: 152 LGQAQQYVGNREAAAQAFQNVLATKPGDIKALQGMASLLLQEQRPEAAIALLQDTIDKKA 211

Query: 178 TKALDISPDAPW--VTEAVV-QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            KA  I P +      + ++ + Y   + +  AI   +Q  K  K+ N  R ++  A+++
Sbjct: 212 IKANQIQPGSVDITAVQLLLGELYTNLRRYDEAIALFDQLIK--KDKNDFRPVV--AKAM 267

Query: 235 ENADKGDMIASY 246
               +G    + 
Sbjct: 268 VFTQQGKTEEAK 279


>gi|330951106|gb|EGH51366.1| TPR repeat-containing protein [Pseudomonas syringae Cit 7]
          Length = 519

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 73/227 (32%), Gaps = 38/227 (16%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y  +  +G   SA   A      +P       A   Q   A  +  ++ ++ +  +   +
Sbjct: 36  YQIAEYMGADQSALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGD 95

Query: 221 WN----RNRAI--------------------------LLIARSLENADKGDMIASYHDAI 250
            +       A+                          L+  ++L     GD   S    +
Sbjct: 96  THFDFLALSAVETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-L 154

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENT 307
           E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E  
Sbjct: 155 EDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQN 212

Query: 308 V--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                  +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 213 RMEDAKVQFAALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 259


>gi|329894006|ref|ZP_08270014.1| TPR domain protein [gamma proteobacterium IMCC3088]
 gi|328923349|gb|EGG30668.1| TPR domain protein [gamma proteobacterium IMCC3088]
          Length = 668

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 80/289 (27%), Gaps = 60/289 (20%)

Query: 54  AWILLFAVSRFFLSCPAMLFH---------MLHKRNYDKGYKALYTGLMSIAAHNIPLA- 103
           AW  L    R+     A                +   + G+  L  G +  A  +   A 
Sbjct: 47  AWYFLAVCQRYTQQAEAASRSLQQCLDIDPSFGRAYQEYGHLHLAQGRVQEAIGSYLDAV 106

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ---YNIAHEKLEMMLQIPATREFAVYSL 160
           R+  S VS         L+ L     A           A E+   +  +P      V + 
Sbjct: 107 RRNDSLVSAWR-----QLIDL-----ATKIGDLNLRKDAEEQYRRLSALPG-ALLGVRNF 155

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA------------- 207
             E    G L  A+      L  +P        +    V       A             
Sbjct: 156 LAE----GKLLKAESLCRTFLKQNPKHVEGMRLLADIGVKLSILDDAEFLLESALVFEPE 211

Query: 208 --------ITFLNQKKKNAKEWNRNRAILL---------IARSLENADKGDMIASYHDAI 250
                   I  L+Q++K A+   + + +L           + + +    G    +     
Sbjct: 212 NPFARFDYINVLHQRQKYAQSLEQAQTLLAQEPSNDRYRTSVANQLVAVGRFEEALDVYD 271

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           +      NS    +    +L +  +  +A     K +K +  PE  + Y
Sbjct: 272 DIAMRVPNSAPLQLLRGHALKTIGRIDEAIEAYRKAYKAS--PEFGDAY 318


>gi|326387782|ref|ZP_08209388.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207828|gb|EGD58639.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 663

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 17/167 (10%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPE---- 294
           GD   +         L   S+   +  AKSL S  +   AE ++      +  HPE    
Sbjct: 113 GDQAGAALAERHGAHLA--SLPPPVLRAKSLFSDGEMDAAERMIRDFLLAHGDHPEAMRL 170

Query: 295 IANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A I +   + ++        L L     +  ++     +  +      +A       ++
Sbjct: 171 LAQIGFVRGVHDDAELLFAGVLALV---PDHHDARGEYVQTLIARHKFSEARKALAPLLE 227

Query: 354 IAPRKEIFLLLAQ-IEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399
             P      + A  I      N   I      A+ A   P    DDG
Sbjct: 228 RDPANHAHRIQAATIAVGLGENDAAIN--LYRAMLADLVPT---DDG 269


>gi|257455108|ref|ZP_05620346.1| tetratricopeptide TPR_2 [Enhydrobacter aerosaccus SK60]
 gi|257447441|gb|EEV22446.1| tetratricopeptide TPR_2 [Enhydrobacter aerosaccus SK60]
          Length = 627

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 74/199 (37%), Gaps = 10/199 (5%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254
           +         +A+    Q+           A  +  R+L           S   A    +
Sbjct: 124 EFAADRGRIDQALATYKQQ------SFLADAAPVFERALGLSLQNEPPQLSLAFANAWQQ 177

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              + + A        +  ++   A   L +I + +P  +++ I   +    T  + +  
Sbjct: 178 QNPDHVPAIFYVTHLALKAHEYELAGEKLNQILQYDPDADLSQILIGIYPTETRDQAELL 237

Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANS 372
             L  ++ ++  SL+++ + + L+      A      A+K  P+   FL+L A I QA S
Sbjct: 238 ATLNRLDIKNNPSLLVMKAGLLLQFQQPKAALVAINRALKTNPKSPAFLILKADILQALS 297

Query: 373 HNTDKILYWTQSALHAMPD 391
             +++++ +   A   +PD
Sbjct: 298 -PSNQVIAFIAQARKTVPD 315



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 2/124 (1%)

Query: 263 SICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEI 320
           +I  A+    + +  +A    ++  +  +  P         L +E     L  A   ++ 
Sbjct: 119 AILMAEFAADRGRIDQALATYKQQSFLADAAPVFERALGLSLQNEPPQLSLAFANAWQQQ 178

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           N + V ++  V+ +AL+    + A  K    ++  P  ++  +L  I    + +  ++L 
Sbjct: 179 NPDHVPAIFYVTHLALKAHEYELAGEKLNQILQYDPDADLSQILIGIYPTETRDQAELLA 238

Query: 381 WTQS 384
               
Sbjct: 239 TLNR 242


>gi|222612526|gb|EEE50658.1| hypothetical protein OsJ_30888 [Oryza sativa Japonica Group]
          Length = 869

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152
           A     AR+++  + + +       VY + ++          A +  E M    +Q    
Sbjct: 402 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 460

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211
              A+  +   + R    ++A      A             +++     AK+W +A+   
Sbjct: 461 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 517

Query: 212 NQ 213
            +
Sbjct: 518 EE 519


>gi|254483058|ref|ZP_05096293.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036743|gb|EEB77415.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 581

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 80/233 (34%), Gaps = 31/233 (13%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           + P  +  A   L     +  D  SA  Y  +ALD +  +      +++           
Sbjct: 57  EDPYAKSSAGRFLARHYVQQKDYASAIAYYEEALDAAGLSGVANREMLR----------- 105

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
                  +    + N + A +++ R+L+     D       A ++     + + A + A 
Sbjct: 106 ----ELAQVYLLDSNHSLAAVVLQRALDIDLVPDARDFLLLA-QAHYRMGDYV-AVVVAL 159

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
             + +   K + + +         H  +A  Y     E     LK   +L ++  ++ E+
Sbjct: 160 DGIQANGLKLEVQQL---------HQALALYYRAGAYEQCENILK---QLLKVEVDNPEN 207

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIA-P-RKEIFLLLAQIEQANSHNTDKI 378
              ++ + L+     QA     LA +   P  +   LLL  ++  + +     
Sbjct: 208 WHQLASVYLQQNKQKQALDHLNLAFEKRVPFAESELLLLVDLQAVSGNPYGAA 260


>gi|148262284|ref|YP_001228990.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146395784|gb|ABQ24417.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 275

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 12/163 (7%)

Query: 102 LARKMHSYVSQQHTFHNEYLV----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           LA+K    ++      +  L      LL++  +  E    +A  K + M Q P       
Sbjct: 102 LAQKPADDLALLKEDTDRRLTAMEERLLKLDKSFEELHKTLAEAKNKEMEQAPD--ALYQ 159

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQK 214
             L  ++ + GD   A+ Y TK +++ P       A     + Y   K++ +AI    + 
Sbjct: 160 RGL--DTLKGGDPQKAREYFTKFIELFPKHELTANARYWLGETYYHEKKYDQAILEFQEV 217

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            KN     +  A +L  +++   + GD  ++ +   + ++   
Sbjct: 218 IKNYPGKEKVPAAML-KQAMAFKELGDAKSARYVYKKLIEDSP 259


>gi|94987433|ref|YP_595366.1| GluNAc transferase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731682|emb|CAJ55045.1| GluNAc transferase [Lawsonia intracellularis PHE/MN1-00]
          Length = 275

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 12/182 (6%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFE 163
                 +      E L    E Q  L +     A E    + +               + 
Sbjct: 104 AAKEALKDFETRRERLFN--EGQKQLEKGNILEAREAFSKLAKEFKDDPELMGQIGKMYL 161

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
                    A  Y   AL I+P+  ++   +        ++  A  +  +  K    +  
Sbjct: 162 KYEY--YEDAIIYLETALTINPELAYLYNYIGIALRKVGKFDIAEKYYLRASK----YLG 215

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               L         D GD   +   A  +LK+  + + A     +    + K + + V+ 
Sbjct: 216 KDPNLFFNLGRLYIDWGDWEKAIVSASAALKVRPDFMEAKKL--RKYAERMKHKNSSVLF 273

Query: 284 EK 285
           E+
Sbjct: 274 EE 275


>gi|8050853|gb|AAF71779.1|AF263912_18 NysRII [Streptomyces noursei ATCC 11455]
          Length = 953

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 88/309 (28%), Gaps = 42/309 (13%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA- 151
           ++ A  +   ARK+           +  +  L       A    + A   L+ ML     
Sbjct: 555 LATAGEDADKARKLARIALTGGVNESLMMPKLAACAALFATDDNDEAVHGLDTMLTAARS 614

Query: 152 -------TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---- 199
                   R F + + ++  + R+         A +AL   P   W   A+         
Sbjct: 615 AHLRSMAARIFNLRARIHLCAARLEAAERDLDSAERAL---PPTSWHPRALPNLIATRIL 671

Query: 200 ---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK-- 254
                    RA            E       LL+AR+   AD GD   +   + E  +  
Sbjct: 672 VSMETGRPDRARRLAEAPVPAGGEEGVWWPALLLARARVAADDGDWEEALRLSRECGRWL 731

Query: 255 -----LCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTHLL 303
                     +     AA++ +      +A  + ++       W       IA + T  L
Sbjct: 732 FRRHWANPAMLSWRPLAAEACLKLGDVTEARRLRDEELFFADRWGTASARGIARLTTRRL 791

Query: 304 SENTVGK-LKRALRLEEINKESVE------SLVIVSKIALEMGSIDQAHAKAMLAMKI-- 354
            ++   + ++R      + ++S        S +  +      G    A        ++  
Sbjct: 792 FDDDGDRAVRRIREAAALLRDSPARLAYLWSRLSQAGAETAHGDTAAAARSWQAVARMTA 851

Query: 355 -APRKEIFL 362
             P   +  
Sbjct: 852 AHPASRLAT 860


>gi|297180994|gb|ADI17196.1| FOG: tpr repeat-protein [uncultured Rhodobacterales bacterium
           HF0070_10D05]
          Length = 734

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 10/170 (5%)

Query: 132 AERQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A   +  +   L + +   P   E  +   L   +    D  SA      A  + P    
Sbjct: 242 ANGDFGKSLRYLNKAIELNPDYAEALINRGLISLAQ--EDKASALTDLENAHKLKPHINQ 299

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +   ++   + AK++   I       K      +    L  + +L +    +   +    
Sbjct: 300 IWHPILTLKMEAKDFEHTIALAEGMVKLDPMDEK----LFASMALSHQHLKNYDDAVVFY 355

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            +++ +  +   A      +L  Q K  +A     K   +   P+ A  Y
Sbjct: 356 NKAISIKPDYATAYNNMGNALKDQGKLDEAIEAFNKALCIK--PDYATAY 403



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 15/182 (8%)

Query: 86  KAL-YTGLMSIAAHNIPLARKMHSYVSQQH----TFHNEYLVYLLEVQIALAERQYNIAH 140
           +AL   GL+S+A  +   A        +         +  L   +E       + +    
Sbjct: 265 EALINRGLISLAQEDKASALTDLENAHKLKPHINQIWHPILTLKMEA------KDFEHTI 318

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
              E M+++    E    S+      + + + A  +  KA+ I PD       +      
Sbjct: 319 ALAEGMVKLDPMDEKLFASMALSHQHLKNYDDAVVFYNKAISIKPDYATAYNNMGNALKD 378

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   AI   N+      ++    A           D+G +  +     ++L +  +  
Sbjct: 379 QGKLDEAIEAFNKALCIKPDY----ATAYNNMGNALKDQGKLDEAIEAFNKALCIKPDYA 434

Query: 261 MA 262
            A
Sbjct: 435 TA 436



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 13/107 (12%)

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            TR            +   +N A   A K   + PD       +        ++ +++ +
Sbjct: 202 ETRLL---------LKQKKVNEALAVAEKTNKLFPDDVEGMGILGSCLRANGDFGKSLRY 252

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           LN+  +   ++    A  LI R L +  + D  ++  D   + KL  
Sbjct: 253 LNKAIELNPDY----AEALINRGLISLAQEDKASALTDLENAHKLKP 295



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 47/136 (34%), Gaps = 8/136 (5%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              +  +  +   A ++ KL  + +         L +     K+   L K  ++N  P+ 
Sbjct: 206 LLKQKKVNEALAVAEKTNKLFPDDVEGMGILGSCLRANGDFGKSLRYLNKAIELN--PDY 263

Query: 296 ANIYTH-----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           A    +     L  E+    L       ++     +    +  + +E    +   A A  
Sbjct: 264 AEALINRGLISLAQEDKASALTDLENAHKLKPHINQIWHPILTLKMEAKDFEHTIALAEG 323

Query: 351 AMKIAP-RKEIFLLLA 365
            +K+ P  +++F  +A
Sbjct: 324 MVKLDPMDEKLFASMA 339


>gi|289207527|ref|YP_003459593.1| hypothetical protein TK90_0342 [Thioalkalivibrio sp. K90mix]
 gi|288943158|gb|ADC70857.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp.
           K90mix]
          Length = 582

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 78/239 (32%), Gaps = 24/239 (10%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             E     A +  E +       +  + +    +  I   ++A+    +     PD    
Sbjct: 343 EMEDDPEGARQAYERVGGGGHADDARLRA-ARMTLEIEGESAARERFEQM-QQGPDTELA 400

Query: 191 TEAVVQ---QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             A V          E++ A   LN+         R    LL  R L +  + D+ A+  
Sbjct: 401 RRAYVGEANLLREKGEYTAARERLNRGLVQFPGDTR----LLYMRGLVHERQDDIEAAEA 456

Query: 248 DAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN--------I 298
           D    L     ++ A +          ++  +A  ++E+ +     P+ A         +
Sbjct: 457 DFRAILDNDPENVAALNALGYTLADRTDRYEEALDLIERAYAQE--PDDAAIIDSYGWVL 514

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           Y     +     L+RA  L     +  E    ++ +  E G  D+A +    A++  P 
Sbjct: 515 YRLGRLDEAEDFLRRAYDL----SDDGEIASNLAVVLWERGERDEARSILEAALEREPD 569



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 99/279 (35%), Gaps = 25/279 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +++ +     A + +   +      ++  +     +IAL  R  N A +  E   Q+ 
Sbjct: 67  GEIAVRSGQYEEAARYYGAAA---LLSDDPAIAERATRIALFARDRNQALQSSERWRQLA 123

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDIS------PDAPWVTEAVVQQYVLAKEW 204
                A+         +G  + A       +D+       P A     AVV Q    +  
Sbjct: 124 PESLDALQLSTVLRLDLGQPDPAAEQMGTVIDLQAVQGGDPYA--ALGAVVGQTHNREAA 181

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A+  L  ++++    +R     + A +      GD   +       ++    S+   +
Sbjct: 182 LEALEKLTDQRQDDVGVHR-----VFAEAALRFAPGDP--ALEATARGVERFPESVSLRL 234

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRAL--RLEE 319
             A++L    +  +A   L     V  HPE       Y  +L+E+   ++ R    RL E
Sbjct: 235 LRARALDEAGQSDEALEELRAT--VANHPESREARFGYARMLAEHDDREMAREEMDRLVE 292

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            + E V+ L+ ++ + LE   +  A         +  R+
Sbjct: 293 QDPEDVQLLLALALMNLEAEQLGPARTYLERLDALGERE 331


>gi|198276654|ref|ZP_03209185.1| hypothetical protein BACPLE_02850 [Bacteroides plebeius DSM 17135]
 gi|198270179|gb|EDY94449.1| hypothetical protein BACPLE_02850 [Bacteroides plebeius DSM 17135]
          Length = 366

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 7/202 (3%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+ +     +P A K             E     L     L   +   A   L+ ++  
Sbjct: 81  DGIRARNMGKLPYAIKCFEEAVA---LQEEKETLGLLASAYLQANRTEDARITLDRLIAK 137

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             T   A+ SL        D     +   KA+ +            +     K   +AI 
Sbjct: 138 DETNVQALLSLASVCYIQEDYEGMDKACQKAIALDEKNAQAYYLAARAARGLKNDLQAIV 197

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +     + +    A LL  R+    +      + +D  + LKL      A +  A  
Sbjct: 198 MLTKAIVQNESFT--EAYLL--RAEVLWEMRQAKDALNDLEQVLKLNPEEEEALLLKATI 253

Query: 270 LISQNKKRKAEVILEKIWKVNP 291
            I   + ++ E  +E++  +NP
Sbjct: 254 HIGMGENQEGEACVEQVIALNP 275


>gi|162454874|ref|YP_001617241.1| hypothetical protein sce6592 [Sorangium cellulosum 'So ce 56']
 gi|161165456|emb|CAN96761.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
            cellulosum 'So ce 56']
          Length = 4053

 Score = 42.2 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 56/198 (28%), Gaps = 19/198 (9%)

Query: 95   IAAHNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQ------IALAERQYNIAHEKLEM 145
            +AA     AR         + Q     E L YL           AL       A E    
Sbjct: 2643 LAAGEADRARAALERALPRAAQPAPLRERLAYLYRASGAWSALAALIAGDAARADEAPAR 2702

Query: 146  M-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            + L   A   +            G   +A     +A+ ++PD   +  A  +    A   
Sbjct: 2703 LSLLREAADLYLTRG--------GSPAAAIPLFDEAIALAPDDLSLRLARSRALSAAGRA 2754

Query: 205  SRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A   L     +      + RA++    +      GD   +  +   +L++      A 
Sbjct: 2755 DDATAALRGIIADFGTRRPKERALVHYELARVALATGDRARAMAEFDLALRVDPAHPDAL 2814

Query: 264  ICAAKSLISQNKKRKAEV 281
               A   +   +  +A  
Sbjct: 2815 HGLAGLALEDGQLERAHR 2832



 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 82/264 (31%), Gaps = 15/264 (5%)

Query: 95   IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
              + ++  AR     +    +     L  L    +  +  +++ A      ++ +     
Sbjct: 3724 ARSGDVERARAHLGDLLHADSKDRAALKAL--AGLEESAARWDAASAVYRRLIALEEGDA 3781

Query: 155  FAVYSLYFES--CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-AITFL 211
                +L       R G L  A+    +AL  +P  P + + +   Y         A   L
Sbjct: 3782 LVATALLLAGTCARAGHLGDARGGLERALRAAPGNPEIRDRLRALYAEIGANRELAAITL 3841

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                  +    R    LL+A      D GD   +     E+  L       ++    +LI
Sbjct: 3842 EDAAAASDVAGRF--TLLVAAGRLLLDVGDAAQAAAALREARSLRPEDNEVALLLVDALI 3899

Query: 272  SQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTV-----GKLKRALRLEEINKE 323
            +    R+A  +   L    K      +  +Y  +             L    R  E + +
Sbjct: 3900 AAGDSREARAVTAELIVAAKGRRSRHLGAVYHRVARIEDAEGNLHESLTALTRALENDPQ 3959

Query: 324  SVESLVIVSKIALEMGSIDQAHAK 347
            + E  + + + AL +G  D A   
Sbjct: 3960 NGEIAMELGESALGLGEEDIAARA 3983



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 75/210 (35%), Gaps = 12/210 (5%)

Query: 160  LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            L       G+ + A+    +AL  +     + E +   Y  +  WS     +      A 
Sbjct: 2638 LADAYLAAGEADRARAALERALPRAAQPAPLRERLAYLYRASGAWSALAALIAGDAARAD 2697

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            E     ++L  A  L     G   A+     E++ L  + +   +  +++L +  +   A
Sbjct: 2698 EAPARLSLLREAADLYLTRGGSPAAAIPLFDEAIALAPDDLSLRLARSRALSAAGRADDA 2757

Query: 280  EVILEKIW----------KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
               L  I           +   H E+A +   L + +    +        ++    ++L 
Sbjct: 2758 TAALRGIIADFGTRRPKERALVHYELARV--ALATGDRARAMAEFDLALRVDPAHPDALH 2815

Query: 330  IVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             ++ +ALE G +++AH      + +A R  
Sbjct: 2816 GLAGLALEDGQLERAHRAYRALLLVARRPR 2845


>gi|108805943|ref|YP_645880.1| tetratricopeptide repeat-containing protein [Rubrobacter
           xylanophilus DSM 9941]
 gi|108767186|gb|ABG06068.1| Tetratricopeptide TPR_2 [Rubrobacter xylanophilus DSM 9941]
          Length = 444

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 59/166 (35%), Gaps = 3/166 (1%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           LI +    A +G +  +     ++L+   +         ++L+   +  +AE       +
Sbjct: 6   LIEQGEALASEGLVEEALERFEQALQRAPDDPEVVEAVGRALLGLGRLEEAEASFLDALE 65

Query: 289 VNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           ++P    P +      +  +     +    R  E + E  ++ V + +    MG    A 
Sbjct: 66  MDPGWVAPRMGLAMVAMRRDEPFKIVHHLERAIEADPEQPDAYVELGRYYGLMGEPLLAR 125

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           A     +   P     L+ A +   ++ +    L + + A+ A  D
Sbjct: 126 ATFERWLARHPDDADMLINAGLTLFDAGDYGPALEFFERAVEAAED 171



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 7/143 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A  +   A  M +Y             +L    +     +   A +     L+   +  
Sbjct: 290 LANGDEEGA--MDAYRRVLELDPENPEAHLELGILHDRRGERQRAEKHFLESLKADPSNP 347

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+YS        G+L +A+    +AL   P       A+        E++ ++ +L + 
Sbjct: 348 RALYSYANVYYTSGELETAEELLARALAADPGYSPALSALASIRARRGEYAASLEYLEKA 407

Query: 215 KKNAKEWNRNRAILLIARSLENA 237
            +        R +    R+LE A
Sbjct: 408 VEAG-----ERDVEHFKRALEFA 425



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 50/177 (28%), Gaps = 21/177 (11%)

Query: 157 VYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           +  LY         GD   A     + L++ P+ P     +   +    E  RA     +
Sbjct: 279 IRHLYTLGEARLANGDEEGAMDAYRRVLELDPENPEAHLELGILHDRRGERQRAEKHFLE 338

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K      R     L + +      G++  +      +L        A    A     +
Sbjct: 339 SLKADPSNPR----ALYSYANVYYTSGELETAEELLARALAADPGYSPALSALASIRARR 394

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            +   +   LEK  +                E  V   KRAL    + ++     ++
Sbjct: 395 GEYAASLEYLEKAVEA--------------GERDVEHFKRALEFAPLRQDPRFRRLL 437


>gi|299535697|ref|ZP_07049018.1| hypothetical protein BFZC1_06728 [Lysinibacillus fusiformis ZC1]
 gi|298728897|gb|EFI69451.1| hypothetical protein BFZC1_06728 [Lysinibacillus fusiformis ZC1]
          Length = 219

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A  E++Y  A +     ++          +       + D   A+R+  KA+ +   A  
Sbjct: 10  AFQEKRYEDAAQLFTKAIEAEPENAIGYVNFGNLLAVLEDTERAERFFQKAITVDESAAT 69

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y  A+ ++ A+    Q  K+  E     A +            +   +    
Sbjct: 70  AYYGLANLYYNAERYAEAVKLYEQALKHHIEG----ADVYYMMGKCFERMDNSKLALPYL 125

Query: 250 IESLKLCDN-----SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLL 303
             ++++           A +  A  +  + K ++ ++++E+ W   + H  +  +Y  + 
Sbjct: 126 QRAVEIAPEDTQIRLAYAIVLCALEMFEEGK-KELDLLIEQDWNNADAHYNLGVLYA-VS 183

Query: 304 SENTVGKLKRALRLEEINKESVESLVI 330
           +E T   +    +   +  E  ++  I
Sbjct: 184 TEQTEDAMYHLKQAFTLQPEYDQARYI 210


>gi|255711458|ref|XP_002552012.1| KLTH0B05170p [Lachancea thermotolerans]
 gi|238933390|emb|CAR21574.1| KLTH0B05170p [Lachancea thermotolerans]
          Length = 593

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 11/202 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+    +Q+  A +  E   ++  +  F    L   + R G  + ++   ++A    P
Sbjct: 379 RGQMYFITQQFEQAGKDFEKAKELSESNIFPYIQLACLTYREGKFDDSETLFSEARRKFP 438

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDM- 242
            AP V     +      + + A    +   K ++A +        LI ++   + +  + 
Sbjct: 439 TAPEVPNFYAETLSDKGDLAGARKQYDIAAKLEDALDGIHVGVSPLIGKATLLSREPSVE 498

Query: 243 --IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
             + +     ++ +    S  A I  A+  + Q    +A  + E+        ++A  + 
Sbjct: 499 NFVEATQLFEKACQNDPRSEQAKIGLAQLKLQQEDIDEAIALFEEA------ADLARSFD 552

Query: 301 HLLSENTVGKLKRALRLEEINK 322
             L   T  +  +  +    + 
Sbjct: 553 EKLQATTFAEATKIQKKIRADP 574



 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 15/146 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAER-----QYNIAHEKLEMMLQIP 150
            ++  ARK +   ++     +   V +  L  +  L  R      +  A +  E   Q  
Sbjct: 455 GDLAGARKQYDIAAKLEDALDGIHVGVSPLIGKATLLSREPSVENFVEATQLFEKACQND 514

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              E A   L     +  D++ A     +A D++            + + A  ++ A   
Sbjct: 515 PRSEQAKIGLAQLKLQQEDIDEAIALFEEAADLARS--------FDEKLQATTFAEATKI 566

Query: 211 LNQKKKNAKEWNRNRAILLIARSLEN 236
             + + +     +    L   R+   
Sbjct: 567 QKKIRADPVVSAKIEETLAAYRAQGM 592


>gi|225873213|ref|YP_002754672.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225792497|gb|ACO32587.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 348

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 86/232 (37%), Gaps = 16/232 (6%)

Query: 133 ERQYNIAHEKLE-MMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             +   A E  E  + Q P       +  L     R+G   +A  Y  KA    P A   
Sbjct: 81  TGRLPQAKEAFEKAIAQNPKDIESVQLEGLTL--FRMGQPKAAIPYLEKAKQWMPTANAD 138

Query: 191 TEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              V+   Y+ A+++  A        +     +   A L++A+ L  ++  D  A+  +A
Sbjct: 139 ASHVLGLCYMNAQQFDDARRAF--AAEYDLPPDSAAAHLILAQMLMLSNLTDQGAA--EA 194

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-P----EIANIYTHLLS 304
            ++L L     MA     +  + +++  +A   L+   K+NP  P     + + Y  +  
Sbjct: 195 QKALALQPGLPMAHFLIGEVDLFKSQVDEAVQQLQAEQKINPTYPPVYSRLGDAYFRIGK 254

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +   +      L  ++  S    +++ K+ L     + A      A ++ P
Sbjct: 255 YDQAEQ-ALLKSLA-LSTSSTGPFILMGKVLLRKQDPETAAMYLRHAEQMDP 304


>gi|255567975|ref|XP_002524965.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
 gi|223535800|gb|EEF37462.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
          Length = 1101

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 8/150 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           E +Y  A    + +L    T               R   L +A    +KA+  +P A   
Sbjct: 359 EGKYASAISIFDQILTEDPTYPEALIGRGTAHAFQRE--LEAAIADFSKAIQSNPLAGEA 416

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            +   Q      E   AI  L +      E+  N A +L  R + N    D  A+  D  
Sbjct: 417 WKRRGQARAALGESIEAIHDLTKAL----EFEPNSADILHERGIVNFKFKDFDAAVQDLS 472

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             +KL  ++  A      +L S  + +KAE
Sbjct: 473 ACVKLDKDNKSAYTYLGLALSSTGEYKKAE 502


>gi|158522430|ref|YP_001530300.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511256|gb|ABW68223.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 792

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 13/230 (5%)

Query: 137 NIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           + A     + +   P T     Y+L     R  DL +A R+   ALD++P          
Sbjct: 510 DQAEPFFQKALTLAPETEAV-HYNLGLVRFRQTDLAAAWRHVNSALDLNPGYDLALNLAG 568

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             ++      +A+    +            A       +    +GD   +      +L+ 
Sbjct: 569 SLHMACGNTGQAVALYRKALAITPLS----AETFNNLGIALHRQGDSGQAMTFFRRALER 624

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGK 310
                 A+    K   +      A   LE+    +P  P    ++  +Y  +  ++    
Sbjct: 625 NPGFADAASNLEKIEAALETYGLAIRALEQAVAASPGDPARLFQLGRLYAAVGMQDKA-- 682

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           L    +   +  +    L  +  +  ++  I +A        ++AP   +
Sbjct: 683 LAAYEKTIVLKPDDAACLNALGTLYADICDIQKAITCFEKLARLAPDNAV 732



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 56/193 (29%), Gaps = 11/193 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+   A     KAL I+P +      +        +  +A+TF  +  +    +   
Sbjct: 572 MACGNTGQAVALYRKALAITPLSAETFNNLGIALHRQGDSGQAMTFFRRALERNPGFADA 631

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A  L          G  I +   A+ +       +       +   +   + KA    E
Sbjct: 632 -ASNLEKIEAALETYGLAIRALEQAVAASPGDPARL---FQLGRLYAAVGMQDKALAAYE 687

Query: 285 KIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           K   + P        +  +Y  +   +    +    +L  +  ++      ++ +     
Sbjct: 688 KTIVLKPDDAACLNALGTLYADIC--DIQKAITCFEKLARLAPDNAVVYYNLACLYARQH 745

Query: 340 SIDQAHAKAMLAM 352
            +  A      A+
Sbjct: 746 QVAPALTNLENAL 758



 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 69/259 (26%), Gaps = 44/259 (16%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           LA       S         L   L   + +A      A       L I         +L 
Sbjct: 543 LAAAWRHVNSALDLNPGYDLALNLAGSLHMACGNTGQAVALYRKALAITPLSAETFNNLG 602

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------ 215
               R GD   A  +  +AL+ +P        + +     + +  AI  L Q        
Sbjct: 603 IALHRQGDSGQAMTFFRRALERNPGFADAASNLEKIEAALETYGLAIRALEQAVAASPGD 662

Query: 216 ------------------KNAKEWNRN------RAILLIARSLENADKGDMIASYHDAIE 251
                             K    + +        A  L A     AD  D+  +     +
Sbjct: 663 PARLFQLGRLYAAVGMQDKALAAYEKTIVLKPDDAACLNALGTLYADICDIQKAITCFEK 722

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
             +L  ++ +     A     Q++   A   LE          +A  Y      + + ++
Sbjct: 723 LARLAPDNAVVYYNLACLYARQHQVAPALTNLENA--------LAAGY------DDMDRI 768

Query: 312 KRALRLEEINKESVESLVI 330
           +    L+ I        +I
Sbjct: 769 RTDKDLDNIRHTEAFDRLI 787


>gi|119496609|ref|XP_001265078.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
 gi|119413240|gb|EAW23181.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
          Length = 688

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 63/193 (32%), Gaps = 22/193 (11%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
              L +     +S     + +    ++  +      +   A + L+M L +         
Sbjct: 361 ENSLRKAQDIAISMLRENNQDPDALMIRARAYYGLGESEQALKTLKMCLGLDP------- 413

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                     D+  A +       ++        A       AK++ +AI   ++  +  
Sbjct: 414 ----------DMKPAIKLLRTVQKLTRTKEEGNNAF-----KAKDYRKAIELWSEALEVD 458

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +     + +L  R+    +  +   + +D  E+LKL  + + A    AK+        +
Sbjct: 459 PQNKDMNSKILQNRAQAYINLKEYENAINDCNEALKLDPSYVKAQKMRAKAYGGAGNWEE 518

Query: 279 AEVILEKIWKVNP 291
           A    + + + NP
Sbjct: 519 AIRDYKAVAEANP 531



 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               ++RAI    +  +         +I L  R+         + +  DA  +L+L  ++
Sbjct: 209 KDGNYNRAIEEFTKAIEINPSS----SIYLSNRAAAYLSANRYLEALEDAERALELDPDN 264

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
                  A+ L +  +  +A  +L    +V P P  A             K++R ++
Sbjct: 265 SKIMYRLARILTALGRPSEALEVLS---RVQP-PASAT------DRAAPEKMQRFIK 311


>gi|117926265|ref|YP_866882.1| sulfotransferase [Magnetococcus sp. MC-1]
 gi|117610021|gb|ABK45476.1| sulfotransferase [Magnetococcus sp. MC-1]
          Length = 1077

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 81/273 (29%), Gaps = 16/273 (5%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           H                   N A    +  +LQ P   E           +     +   
Sbjct: 33  HTPPAQRYSAAMALHRRGALNEAEAAYKTELLQDPDDAEGHHLLGLLLYQQQRHAEARPH 92

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            A     + P + +         +  ++++ A T   +  +   ++       L+   + 
Sbjct: 93  LAR-VSALRPQSAYHHYHCGLVDMALQDFAAATTCFQKALQYKPDYTD----ALLNLGVV 147

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291
              +G   A+    ++++++  +S+ A I        Q +   A+ +L +  K  P    
Sbjct: 148 YQQQGKPQAAEQAWLQAIQVDPSSMGAYINLGLFYQEQQRLPDAKQVLMQGLKHAPNALP 207

Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              ++A + T L        L     + +       +   +    +++G+   A  +   
Sbjct: 208 LQEKLAQLLTTLGEYPAALPL--LEAVAQAKPTDWGAQRALGLAQIQVGAFAAAVPQLER 265

Query: 351 AMKIAPRKEIFLL--LAQIEQANSHNTDKILYW 381
             +      I  L  LA   Q      + +  W
Sbjct: 266 VAQAD-EGRIATLHGLATALQGCGRVDEAVQVW 297


>gi|257482005|ref|ZP_05636046.1| TPR domain-containing protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|330988607|gb|EGH86710.1| TPR domain-containing protein [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331008865|gb|EGH88921.1| TPR domain-containing protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 556

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 74  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 246

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|226359536|ref|YP_002777314.1| LuxR family transcriptional regulator [Rhodococcus opacus B4]
 gi|226238021|dbj|BAH48369.1| putative LuxR family transcriptional regulator [Rhodococcus opacus
           B4]
          Length = 772

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 10/105 (9%)

Query: 89  YTGLMSIAAHNI----PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
             G+++    ++     L  K   Y +       E LV   E Q+AL+     +A    E
Sbjct: 456 TEGMLAAMQGDVTDPVALVAKARHYAAGVADPGLEQLVTRTEAQLALSSGDAALAVTHFE 515

Query: 145 MML------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +L      +   T+   +  L     R GD   A     + L I
Sbjct: 516 KVLDACRASEDLDTQLEVLLGLGVACGRCGDRARAMTCFEEILAI 560


>gi|196034328|ref|ZP_03101737.1| TPR domain protein [Bacillus cereus W]
 gi|195992870|gb|EDX56829.1| TPR domain protein [Bacillus cereus W]
          Length = 219

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    ++ EI  +  
Sbjct: 181 YVFEENNEKALALFKKVTEIQPDHF 205


>gi|187736425|ref|YP_001878537.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187426477|gb|ACD05756.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 917

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 71/254 (27%), Gaps = 31/254 (12%)

Query: 121 LVYLLEVQ---IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           L   L  +    A   R   +A      M                 +        A   A
Sbjct: 508 LAQALSAERGKAAQLARDLELARS---QMKTKAD----------KSARNDKKQAEALARA 554

Query: 178 TKALDISPDAPWV---TEAVVQQYVLAKEWSRAITF------LNQKKKNAKEWNRNRAI- 227
            KAL+               ++     +    AI+         +    + E    R + 
Sbjct: 555 QKALEQKNIQVEELTRQMEELKSRSAEQARLAAISAGTITPDQEKALNRSMEATVRRKLE 614

Query: 228 --LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              L   + E   K    A+       L      + A +     L+ +NK  +A   L+K
Sbjct: 615 AEALGQGAAEAFAKKRYAAAEQLYRTLLDFQPAHVPALVNLGTILLQRNKAEEAIKFLKK 674

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSID 342
             +++     A     +              L     ++  +  +L+ +  +    G+ +
Sbjct: 675 ATELDASSSPAWFMMGVAQYRAGEDHHAIASLTETVRLDPANAPALLYLGNLETSAGNYE 734

Query: 343 QAHAKAMLAMKIAP 356
           +A A    A+KI P
Sbjct: 735 KAVAHFENALKIQP 748


>gi|332266747|ref|XP_003282359.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Nomascus
           leucogenys]
          Length = 738

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 34  SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 93

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 94  PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 146

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 147 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 205

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 206 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 263

Query: 360 IFLLL 364
           +   +
Sbjct: 264 VCQYM 268


>gi|329889169|ref|ZP_08267512.1| tetratricopeptide repeat family protein [Brevundimonas diminuta
           ATCC 11568]
 gi|328844470|gb|EGF94034.1| tetratricopeptide repeat family protein [Brevundimonas diminuta
           ATCC 11568]
          Length = 501

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 77/223 (34%), Gaps = 14/223 (6%)

Query: 95  IAAHNIPLARKMHSYVSQQHTF---HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           +A+      R + +  + +  F    +    +L+  +      +++ A +     L+   
Sbjct: 79  LASSLGDTGRNLEAVEAARRAFANGGDAPETWLVLARALSGCGRHDEADDAYRQALKRRP 138

Query: 152 TREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAIT 209
               AV  L        G   +A      AL  +P    +   +    +    +   A  
Sbjct: 139 VYGDAVRELAQLIWMCGGGREAAAAPVLDALKAAPGDAELLTCLAVVLMYGGADPREAWG 198

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L ++ ++       RA ++   + + A K D   +   A  + +   N++      A++
Sbjct: 199 ELTRRVRDGGV----RAAMVEMAAGQLALKFDPALAVGHAHAATQAAPNTLEPWTSLAEA 254

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           +I+      A  IL ++    P P+   +  H     T  +LK
Sbjct: 255 MIASGDPDGALEILRQL-LAAPTPDQKVLALHA----TASRLK 292



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 69/225 (30%), Gaps = 13/225 (5%)

Query: 161 YFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           +  +  +GD      A   A +A     DAP     + +          A     Q  K 
Sbjct: 77  HNLASSLGDTGRNLEAVEAARRAFANGGDAPETWLVLARALSGCGRHDEADDAYRQALKR 136

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKK 276
              +    A+  +A+ L     G   A+    +++LK    ++ + +  A   +      
Sbjct: 137 RPVYG--DAVRELAQ-LIWMCGGGREAAAAPVLDALKAAPGDAELLTCLAVVLMYGGADP 193

Query: 277 RKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           R+A       +          E+A     L  +  +  +  A    +    ++E    ++
Sbjct: 194 REAWGELTRRVRDGGVRAAMVEMAAGQLALKFDPALA-VGHAHAATQAAPNTLEPWTSLA 252

Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTD 376
           +  +  G  D A       +    P +++  L A   +       
Sbjct: 253 EAMIASGDPDGALEILRQLLAAPTPDQKVLALHATASRLKGQADA 297


>gi|297661669|ref|XP_002809357.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
           13-like [Pongo abelii]
          Length = 814

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 114 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 173

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 174 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 226

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 227 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 285

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 286 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 343

Query: 360 IFLLL 364
           +   +
Sbjct: 344 VCQYM 348


>gi|296114966|ref|ZP_06833611.1| cellulose synthase operon C domain protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295978484|gb|EFG85217.1| cellulose synthase operon C domain protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 1195

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 91/288 (31%), Gaps = 24/288 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154
                 A + +  +  ++   +  +  +   ++ + E Q N A+  L  +        ++
Sbjct: 433 TGQTGEAERNYRAILARN--GDNPIALMGLARVLMGEGQENEANALLSRLGGRYSDQVQQ 490

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             V  +  E+ R  D         +A+  +PD PW+   +        + + A   +   
Sbjct: 491 IEVSGIMAEAARTSDSAQKVSLLRQAMTKAPDDPWLRINLANALQQQGDSAEAANVMRPL 550

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLIS 272
             + +     +A +L A      +  D +A    A     L  +    +I   A +  I 
Sbjct: 551 LTSPRTPADYQAAILYASG----NGNDTLARRLLA----GLSPDDYSPAIRTIADEMAIK 602

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +   +  ++       NP P +         + T  +      L     + + + + + 
Sbjct: 603 ADLASRLSMV------SNPTPLVREALAA--PDPTGARGVAVADLFRQRGDMLHAHMALR 654

Query: 333 KIALEMGSIDQAH--AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             +     +      A A   MKI+       LLA +   +   T   
Sbjct: 655 IASTRNIDLTTEQRLAYATEYMKISNPVAAARLLAPLGDGSGTATGSA 702


>gi|281350820|gb|EFB26404.1| hypothetical protein PANDA_005322 [Ailuropoda melanoleuca]
          Length = 770

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 66  SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 125

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 126 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 178

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 179 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 237

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 238 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 295

Query: 360 IFLLL 364
           +   +
Sbjct: 296 VCQYM 300


>gi|194206137|ref|XP_001916733.1| PREDICTED: tetratricopeptide repeat domain 13 [Equus caballus]
          Length = 852

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 148 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNADLALFELSRVITLEPDR 207

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 208 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 260

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 261 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 319

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 320 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 377

Query: 360 IFLLL 364
           +   +
Sbjct: 378 VCQYM 382


>gi|239741018|ref|XP_002342056.1| PREDICTED: tetratricopeptide repeat protein 34 [Homo sapiens]
 gi|190462818|sp|A8MYJ7|TTC34_HUMAN RecName: Full=Tetratricopeptide repeat protein 34; Short=TPR repeat
           protein 34
          Length = 566

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283
            L  R+L +     +  +  D + +LKL   +++  + +    A++LI+Q        +L
Sbjct: 214 ALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLKPEAQALITQGLYSHCRALL 273

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                     ++ +    L  ++T G L     L +I+       ++++ I +  GS ++
Sbjct: 274 S---------QLPDTGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADILMAQGSYEE 324

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT-DKILYWTQSA-LHAM 389
           A      A+  AP  E       + Q    +           A + A 
Sbjct: 325 AGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAP 372


>gi|170784867|ref|NP_078801.3| tetratricopeptide repeat protein 13 isoform a [Homo sapiens]
 gi|212276494|sp|Q8NBP0|TTC13_HUMAN RecName: Full=Tetratricopeptide repeat protein 13; Short=TPR repeat
           protein 13
 gi|55960679|emb|CAI17217.1| tetratricopeptide repeat domain 13 [Homo sapiens]
 gi|55962311|emb|CAI15330.1| tetratricopeptide repeat domain 13 [Homo sapiens]
          Length = 860

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385

Query: 360 IFLLL 364
           +   +
Sbjct: 386 VCQYM 390


>gi|114573136|ref|XP_001149624.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 6 [Pan
           troglodytes]
 gi|114573138|ref|XP_001149480.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Pan
           troglodytes]
          Length = 860

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385

Query: 360 IFLLL 364
           +   +
Sbjct: 386 VCQYM 390


>gi|114573146|ref|XP_524534.2| PREDICTED: tetratricopeptide repeat domain 13 isoform 7 [Pan
           troglodytes]
          Length = 845

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385

Query: 360 IFLLL 364
           +   +
Sbjct: 386 VCQYM 390


>gi|114573148|ref|XP_001148919.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1 [Pan
           troglodytes]
          Length = 769

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385

Query: 360 IFLLL 364
           +   +
Sbjct: 386 VCQYM 390


>gi|109020014|ref|XP_001107062.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 5 [Macaca
           mulatta]
          Length = 860

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385

Query: 360 IFLLL 364
           +   +
Sbjct: 386 VCQYM 390


>gi|73952538|ref|XP_546094.2| PREDICTED: similar to tetratricopeptide repeat domain 13 isoform 1
           [Canis familiaris]
          Length = 859

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 155 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 214

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 215 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 267

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 268 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 326

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 327 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 384

Query: 360 IFLLL 364
           +   +
Sbjct: 385 VCQYM 389


>gi|50949446|emb|CAH10599.1| hypothetical protein [Homo sapiens]
          Length = 785

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 81  SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 140

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 141 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 193

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 194 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 252

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 253 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 310

Query: 360 IFLLL 364
           +   +
Sbjct: 311 VCQYM 315


>gi|47210998|emb|CAF95830.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 402

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 32/210 (15%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYS 159
            A  + S   +   F  E L  L          +Y  A      +L++ +T      V  
Sbjct: 70  RALAVASACQRFKIFKAECLALL---------GRYPEAQSVATDILRLDSTNADALYVRG 120

Query: 160 L--YFESCRIGDLNSAQRYATKALDISPDAPWVTEA-----VVQQYVLAK-------EWS 205
           L  Y+E C    ++ A ++  +AL ++PD      A      ++              + 
Sbjct: 121 LCLYYEDC----IDKAVQFFIQALRMAPDHEKARLACRNAKALKAKKEEGNEAFKKCNYE 176

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A     +         +  A L   R+   A    +  +  D   ++KL D  I A + 
Sbjct: 177 AAYQLYTKALMIDPNNIKTNAKLYCNRATAGAKLNKLNQTIEDCTSAIKLDDTYIKAYLR 236

Query: 266 AAKSLISQNKKRKAEVILEKIW---KVNPH 292
            A+  +   +  +A    EK++   K + H
Sbjct: 237 RAQCYMDTEQYEEAVRDYEKVYHDSKKHQH 266


>gi|268562285|ref|XP_002638558.1| Hypothetical protein CBG05596 [Caenorhabditis briggsae]
 gi|187034843|emb|CAP26045.1| hypothetical protein CBG_05596 [Caenorhabditis briggsae AF16]
          Length = 956

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 82/227 (36%), Gaps = 26/227 (11%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A+       + +P  P  WV  AV+++     +   A   +    +  ++   +  
Sbjct: 304 DIKKARMLLKSVRETNPRHPPAWVASAVLEEQA--GKLQTARNLI---MEGCEKIKNSEE 358

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L  +D G  I +      +++ C  S+     A+        K+K   +L K 
Sbjct: 359 LWLHAIRLHPSDVGKSIVA-----NAVRSCPQSVRLWCKASDLEQDIKDKKK---VLRKA 410

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P   ++      L   E     L RA    E    S E  + ++++     + + A
Sbjct: 411 LEQIPSSVKLWKAAVELEDPEEARILLTRA---VECCSSSTEMWLALARL----ETYENA 463

Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A +  P    I+L  A++E+        +      AL+++ 
Sbjct: 464 RKVLNKAREHIPTDRHIWLSAARLEETRGQKD-MVDKIVSKALNSLR 509


>gi|22761440|dbj|BAC11586.1| unnamed protein product [Homo sapiens]
          Length = 860

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385

Query: 360 IFLLL 364
           +   +
Sbjct: 386 VCQYM 390


>gi|85710130|ref|ZP_01041195.1| thioredoxin [Erythrobacter sp. NAP1]
 gi|85688840|gb|EAQ28844.1| thioredoxin [Erythrobacter sp. NAP1]
          Length = 310

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 21/160 (13%)

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI---LEKIWKVNP 291
           +   +GD   +     +  +   ++  A     +SL++  +  +A+ +   +E   K+  
Sbjct: 145 DALGEGDAQRAASIFAQVTEFASDNAPAHAGLVRSLVALGQVEEAKQVMTAIEADPKLAS 204

Query: 292 HPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            P IA   + L    T    G+L       + + +++E+ +  ++ A   G  D+A    
Sbjct: 205 DPSIAAAKSALELAGTQVDDGELASLRDTAKASPDNMEAQMAYAEAAFAGGQRDEAAD-- 262

Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                         LLA IE     N             A
Sbjct: 263 -------------TLLAMIEADREWNDGAARAKLLQIFEA 289


>gi|323698111|ref|ZP_08110023.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           sp. ND132]
 gi|323458043|gb|EGB13908.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 758

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QI 149
           G +++   + P A + +              V L    +   +     A   L  +  Q 
Sbjct: 584 GNLAVNRGDDPAAERDYRKAIAIDDHFYPAKVNL--AMLYNRQGDNVRAERLLREVTVQR 641

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT----EAVVQQYVLAKEWS 205
           P   E A YSL      +G    A+ Y  +A +  P+         + ++      +   
Sbjct: 642 PDLYEVA-YSLGLLLAEMGRYTDAETYLGRAAEHLPENARAQYNYGQVLLALKRPVE--- 697

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                     K A +   +     +A +      G    +   A+  L+       A+  
Sbjct: 698 -----AEAAMKRALDAAPHNQAYFVALANFYLASGRPDKARDLALRILERSPGDTAATEL 752



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 21/192 (10%)

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +A  +    P        +     +    +    Q  +   ++   R   L   +    +
Sbjct: 538 EAAALLSSLPESDLREADREAFRAD----LEDYRQSLRYNADFAAQR-YNLGNLA---VN 589

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
           +GD  A+  D  +++ + D+   A +  A     Q    +AE +L ++      P++  +
Sbjct: 590 RGDDPAAERDYRKAIAIDDHFYPAKVNLAMLYNRQGDNVRAERLLREV--TVQRPDLYEV 647

Query: 299 YTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
              L           +    L RA    E   E+  +     ++ L +    +A A    
Sbjct: 648 AYSLGLLLAEMGRYTDAETYLGRA---AEHLPENARAQYNYGQVLLALKRPVEAEAAMKR 704

Query: 351 AMKIAPRKEIFL 362
           A+  AP  + + 
Sbjct: 705 ALDAAPHNQAYF 716


>gi|323489123|ref|ZP_08094357.1| Tetratricopeptide repeat protein [Planococcus donghaensis MPA1U2]
 gi|323397246|gb|EGA90058.1| Tetratricopeptide repeat protein [Planococcus donghaensis MPA1U2]
          Length = 1382

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 55/159 (34%), Gaps = 7/159 (4%)

Query: 121  LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            L + L  ++A    +++ A       ++  +    A   L      + D + A + A   
Sbjct: 895  LAHYLLGRLAEQTEKWHEALAHYTKCVKADSRFMVAHEGLMRSYLALEDQDRAFKAALFV 954

Query: 181  LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            L+  P +  + E + +        S A      +             LL A++     +G
Sbjct: 955  LENEPLSLDLQE-LFELVD-----SDAKQLAIGRVLEKVSAQVLEEWLLSAKAQLAEKRG 1008

Query: 241  DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             +  + +  +++  L   ++ +     +  + Q   ++A
Sbjct: 1009 KVAEAENLLLQAQALN-GALPSRYQYMQFCVRQGDLKRA 1046


>gi|294776566|ref|ZP_06742038.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
 gi|294449583|gb|EFG18111.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
          Length = 284

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                L AR+    +      +  D  E+ KL  +     +   +  +SQ KKR+A V  
Sbjct: 204 RDVSYLKARATLAVEMNTPDLALLDLEEAAKLAPDDAEIYVMCGEIYLSQKKKREAYVAF 263

Query: 284 EKIWKVN-PHPEI 295
           EK  ++  P PE+
Sbjct: 264 EKAIELGVPRPEL 276


>gi|289643209|ref|ZP_06475336.1| adenylate/guanylate cyclase with TPR repeats [Frankia symbiont of
            Datisca glomerata]
 gi|289506980|gb|EFD27952.1| adenylate/guanylate cyclase with TPR repeats [Frankia symbiont of
            Datisca glomerata]
          Length = 1295

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 31/188 (16%)

Query: 88   LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
            +  GL +  A +                       +L   Q A  +  +  A      M+
Sbjct: 1025 VARGLAARGAGD-----------------PERGAAHLHNAQAAADQGGH--AVVGALSMV 1065

Query: 148  QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSR 206
             +  TR  A   L  E+ +  DL      A  +L++ P A    + +  Q   A      
Sbjct: 1066 LLGLTRLDA--GLLNEAEQAADLA---MRALDSLELQPHAQLGAKVLAAQVARARGRLQE 1120

Query: 207  AITFLNQKKKNAKEWN----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            AI  L       +       R +A   +  +    D G    +   A  ++++    + A
Sbjct: 1121 AIQLLETALAAGEPATLLFPRRQAYAHL--AGTLLDAGRPAEALAVARRAVEVGAEDVRA 1178

Query: 263  SICAAKSL 270
             + A ++L
Sbjct: 1179 QVLAWRAL 1186


>gi|295690653|ref|YP_003594346.1| tetratricopeptide repeat-containing protein [Caulobacter segnis
           ATCC 21756]
 gi|295432556|gb|ADG11728.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter segnis ATCC
           21756]
          Length = 497

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 80/276 (28%), Gaps = 20/276 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEK-LEMMLQIPATRE 154
                A +M +  +       +    LL    A  +   +++ A       + + PA R 
Sbjct: 16  GRAAEALRMTAAPA----LSPQATSGLLMAHAAALKAVGRHDEALTFNRRAVTRAPADRF 71

Query: 155 FAVYSLYFESCRIGD---LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                 Y  +  +GD      A+  A K + +  D P V   + +     + +  A    
Sbjct: 72  A----WYNLAATLGDLSLHAEAEEAARKTIALGLDVPEVRLVLGKALQGLRRYDEAEGAF 127

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                       +  + L    L     G   A+      ++          +  +  L 
Sbjct: 128 ETALAARPT---DATVHLELAQLRWMRTGRTDAALALLDAAIARHPTVSNLRLIRSTVLT 184

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINKESVESL 328
                  A+  LE      P   +  I     +     +   L  A   +     + E+ 
Sbjct: 185 FAGDHAGADATLEDALARAPDDLLVRIAAARSAGAQGDRERMLGHAREAQRRAHGAGETR 244

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            ++ +  L  G  D A   A   +  AP  +  L+L
Sbjct: 245 AVLCEALLANGEADAAARVAEDMVAAAPDDQYALVL 280


>gi|261327858|emb|CBH10836.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 1502

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 80/273 (29%), Gaps = 12/273 (4%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               ARK     + +     E      E + A  + +   A +K E M +    R+  + 
Sbjct: 476 EEEAARKKAEEEAARKRAEEEAARKKAEEEAARKKAEEEAARKKAEKMRKRAQARKARMK 535

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +    + +  +  +A++ A +                ++        +A     +K+   
Sbjct: 536 A-EEAARKRAEEEAARKKAEEEAARKRAEEEAARKRAEEEAAR---KKAEEEAARKRAE- 590

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +E  R RA    AR     +     A    A +  +       A   AA+    +   RK
Sbjct: 591 EEAARKRAEEEAARKRAEEEAARKKAEEEAARKKAEEEAARKRAEEEAARKRAEEEAARK 650

Query: 279 AEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
                E+  +     E A            +E    + K          E   +     +
Sbjct: 651 KAE--EEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEE 708

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            A    + ++A  K    M+   +     + A+
Sbjct: 709 EAARKKAEEEAARKKAEKMRKRAQARKARMKAE 741


>gi|224588264|gb|ACN58888.1| TPR repeat protein [uncultured bacterium BLR13]
          Length = 746

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 76/242 (31%), Gaps = 26/242 (10%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +     +A +   +AL ++P                     A     +  +   ++   
Sbjct: 166 QQTKRYAAALQSVEQALALNPHNVEAYNNRGNILRELGRLDEAGESYRRALELVPQY--A 223

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A   + R L + ++ +   +     +++ L      A    A  L   N+   A    E
Sbjct: 224 DAHCNLGRLLLSRERFE--DALQCYDQAIGLDPQLAQAYRHRAIVLRKLNRTEDALRDNE 281

Query: 285 KIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKES----VESLVIVS 332
               +    E+ + Y  L          E+  G +   L+L+  + ++    + + ++ +
Sbjct: 282 TASGLQ--RELTDAYCKLGKELREQGRPESAAGVIAALLKLDGSDSDAGIWQLHARMLNA 339

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALH-AMP 390
                 G  + A A    A+ + P    + L    I +A     +      + A+  A  
Sbjct: 340 -----AGRHEDALASIGRALALKPDSGDYHLTRGAILRATLQ-YEAARQCYEKAVELAPR 393

Query: 391 DP 392
            P
Sbjct: 394 HP 395



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 93/259 (35%), Gaps = 24/259 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           E +   A    E +L++      A++ +   + + G+ + A  +   AL + PD      
Sbjct: 32  EGELAKAMHTYEQVLKLAPRHVEALHHVGIVAFQTGNFDMAAGFIRSALTVDPDHAGAHG 91

Query: 193 AVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            +       +    A+   ++  +    + +      +  ++L+  +  D + SY  A+E
Sbjct: 92  DLGNALREMQHLEDALRSYDRALELTGGDADTYYNRAVALQALQRQE--DALHSYDQALE 149

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVI--LEKIWKVNPHPEIANIYTH-------- 301
                D          ++++ Q  KR A  +  +E+   +NPH      Y +        
Sbjct: 150 LNAGDDQ-----AWNNRAVVFQQTKRYAAALQSVEQALALNPHN--VEAYNNRGNILREL 202

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360
              +      +RAL L     +  ++   + ++ L     + A      A+ + P+  + 
Sbjct: 203 GRLDEAGESYRRALELV---PQYADAHCNLGRLLLSRERFEDALQCYDQAIGLDPQLAQA 259

Query: 361 FLLLAQIEQANSHNTDKIL 379
           +   A + +  +   D + 
Sbjct: 260 YRHRAIVLRKLNRTEDALR 278


>gi|307150426|ref|YP_003885810.1| purine or other phosphorylase family 1 [Cyanothece sp. PCC 7822]
 gi|306980654|gb|ADN12535.1| purine or other phosphorylase family 1 [Cyanothece sp. PCC 7822]
          Length = 1389

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L  K  +  ++       LI   L++  +G         I++ +   ++  A   AA+
Sbjct: 321 DELWHKADDKAKYRLLAKTGLIQLGLDHYHEGASNL-----IKAKQYNPDNETALALAAR 375

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
             I   +  +AE+++EK+ + NP   +A      ++       K   ++ E  +   + L
Sbjct: 376 GHILHKQYEQAEILIEKVLEKNPANALAYSLRVDMANEADSIDKILEQIPEPYRNEPDVL 435

Query: 329 VIVSKIALEMGSIDQAHAKAMLAM 352
           + + + A       QA      A+
Sbjct: 436 IALGQAAFNRQLYPQAEEWVQSAI 459



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            ++  AI  ++   +   +     A  +  R++   +KG+   +Y  + + L        
Sbjct: 543 GKYDEAIRDIDLVLQREPD----NAYCIKQRAILAHEKGNEEQAYEFSKKLLS-SPEIPE 597

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--------ANIYTHLLSENTVGKLKR 313
           ASI AA SLI+  +  +A+ ILE+  +   H ++          IY  L    +  K+  
Sbjct: 598 ASILAASSLITMQRFPEAQKILEEFQQTEGHEKLKQETKRLQVEIYFKLKDYKSAQKI-- 655

Query: 314 ALRLEEINKESVESLVI 330
              L   + E+  +L++
Sbjct: 656 LEELLNGDPENTFNLIL 672


>gi|171059259|ref|YP_001791608.1| response regulator receiver protein [Leptothrix cholodnii SP-6]
 gi|170776704|gb|ACB34843.1| response regulator receiver protein [Leptothrix cholodnii SP-6]
          Length = 577

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 11/149 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                AR + + + +           L   +  +       A   LE ++    +   A 
Sbjct: 183 GRHDDARALFTAIRETRAL---PWAKLGIARAEVEAGTTVQARRTLESLISDNPSFADAY 239

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL----AKEWSRAITFLNQ 213
             +       GDL  A     +A  I+P     +   +Q+  +    A +W  A   L +
Sbjct: 240 DVMGRVQVEQGDLEGALATFRRASAITP----ASVTRLQKQGMLAFYAGQWDEAGKALER 295

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDM 242
                          L+  +L   D+ D 
Sbjct: 296 AMVTGLSSKMFDMQTLVLLALLRFDQTDP 324


>gi|188993860|ref|YP_001905870.1| hypothetical protein xccb100_4465 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735620|emb|CAP53838.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 919

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           K  +R RA L   R L+   +     +     E+LKL  +  +A+         Q +  +
Sbjct: 798 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 857

Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A   LE   K++P        + + Y     +    + K       +  +   +    ++
Sbjct: 858 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 915

Query: 334 I 334
           +
Sbjct: 916 L 916


>gi|27803004|emb|CAD60707.1| unnamed protein product [Podospora anserina]
          Length = 508

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 56/189 (29%), Gaps = 17/189 (8%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++ AA  +     +    +            L   Q  L++ + N A    +  +    +
Sbjct: 8   LAFAAGFLSTPSMVSGLSTSDIPADTPISALLASAQSHLSKGETNDALVYYDAAIARDPS 67

Query: 153 REFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  L+  +     +G  + A     K L I P        + +    A +W  A  
Sbjct: 68  NYLT---LFKRATTYLSLGRRSQATDDFEKVLSIKPTFEGAHLQLGKLRASAADWDGAKL 124

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              + KK  +      A      +   A  G+         E +K  D+    +I  A  
Sbjct: 125 HYKKAKKTEEVAAVEAAKAAAKAAEAAAKAGN-------WEECVKQADD----AILTANR 173

Query: 270 LISQNKKRK 278
            I   + RK
Sbjct: 174 AIHLRELRK 182


>gi|225873133|ref|YP_002754592.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225791697|gb|ACO31787.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 744

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 56/169 (33%), Gaps = 13/169 (7%)

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +++ A+   +   +   ++    A      ++         ++      +L L  +   A
Sbjct: 540 QYAAAVKAFDHVVQLRPDY----ADAYTNIAVVEIPWEKYGSAMDSIRRALMLSPHDARA 595

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRL 317
              AA         ++    L +  K  P       E+   Y  L  +     +++   L
Sbjct: 596 HYYAALLERRAGHPQQEVADLLEAEKQYPQSRDVRRELGVAYYRLGEDKLA--IEQFEAL 653

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--KIAPRKEIFLLL 364
           E+I+ + + +   ++ +    G   QA A+  L +  K+         +
Sbjct: 654 EKIDPDDLAAHYNLAILYHRAGMATQARAEQALFVTEKVNSTARSLSFM 702


>gi|195472283|ref|XP_002088430.1| GE12522 [Drosophila yakuba]
 gi|194174531|gb|EDW88142.1| GE12522 [Drosophila yakuba]
          Length = 590

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 11/205 (5%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            ++L   ++ +    +    NA      RA   I R+              D  E+ +L 
Sbjct: 306 FHLLCGSYAESQQDFDAILANADADPNLRAYAYIKRAALFIQLDQREKGLADFDEAERLN 365

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKR 313
             +       A+ L+   +   A    EK  ++ P   IA     Y         G  +R
Sbjct: 366 PENPDVYHQRAQILLLLEQIEPALAEFEKAVRIAPDHAIAFVQKCYAEYRLSLLAGDQRR 425

Query: 314 ALRL-------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              +        +     VE   +++++  +     QA      AMK+AP     ++   
Sbjct: 426 LESVMHTFQNAIDRFPSCVECYSLMAQVLADQQQFPQAQEYYEKAMKLAPTNPALIVHQA 485

Query: 367 IEQAN-SHNTDKILYWTQSALHAMP 390
           I       + +  +     A+   P
Sbjct: 486 IMVLQWRGDIEMAVQLLNKAIEVDP 510



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 7/156 (4%)

Query: 171 NSAQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             A     KA+ I+PD          A  +  +LA +  R  + ++   +NA +   +  
Sbjct: 386 EPALAEFEKAVRIAPDHAIAFVQKCYAEYRLSLLAGDQRRLESVMHT-FQNAIDRFPSCV 444

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEK 285
                 +   AD+     +     +++KL   +    +  A  ++  +     A  +L K
Sbjct: 445 ECYSLMAQVLADQQQFPQAQEYYEKAMKLAPTNPALIVHQAIMVLQWRGDIEMAVQLLNK 504

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
             +V+P  E+A      + E    +LKRA+ L E  
Sbjct: 505 AIEVDPKCELAYETLGTV-EVQRAQLKRAVELFEKA 539


>gi|149919362|ref|ZP_01907844.1| hypothetical protein PPSIR1_04078 [Plesiocystis pacifica SIR-1]
 gi|149819862|gb|EDM79286.1| hypothetical protein PPSIR1_04078 [Plesiocystis pacifica SIR-1]
          Length = 589

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 12/124 (9%)

Query: 157 VYSLYFESCRI----GDLNSAQRYATKALDISPDAPWVTEAVVQQY---VLAKEWSRAIT 209
           +  LY +        GD   A   + +AL++ P      +  +        A   S +  
Sbjct: 320 LLGLYMQRIAAHVADGDTKQAIAMSEQALELDPT-----DRTLNLQHVIATAMRNSGSGR 374

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L    +   E+NR RA++  A +L+    G   ++     ++ +     +   +  A+ 
Sbjct: 375 KLLADWEADPEYNRMRALVETAYALKMMGIGQFASARAATEKAERYAPELLETHLARAEL 434

Query: 270 LISQ 273
               
Sbjct: 435 QAET 438



 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 57/149 (38%), Gaps = 11/149 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREF-----AVYSLYFESCRI---GDLNSAQRYA 177
           E + ALAE   + A +    +++   +R+      A+ SL  +        D +SA    
Sbjct: 48  EAETALAEGDESRAEQLYREVMRNKKSRDSEDARRALVSLLLQRAARMMETDSDSAMPIY 107

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
              + + PD+     A  +  +  + ++ A+  L +  K  +      +++ I     N 
Sbjct: 108 RDVISLKPDSDEARIAYARALMKVERYTEAVDVLMED-KGCRGCKSLISVIYIESGNTNV 166

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICA 266
             G+   +  D   +L +  +    ++ A
Sbjct: 167 RDGNYSEALEDYDLALSVNRD--PLTVLA 193


>gi|71747738|ref|XP_822924.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70832592|gb|EAN78096.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 466

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 86/220 (39%), Gaps = 28/220 (12%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V  L     R GDL  + ++  KAL ++P +P   + + Q  +L  ++  AI    + ++
Sbjct: 100 VKGLLT--RRSGDLTISFQHFQKALTLNPGSPACLQQLAQTSLLLGKFYEAIESFQRAEE 157

Query: 217 N------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                   K+W+    + L    +    K +   ++  +++  +         +  +K L
Sbjct: 158 ARAARGFRKDWSLQYGVGLCYEYMREYRKAE--EAFVSSMQIQRFDCT----VLRLSKVL 211

Query: 271 ISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHL-LSENTVGKLKRALRLEEINKES 324
           + Q +  +A  +LE+    +P +P+    +  +Y  +         L R L L      S
Sbjct: 212 VLQKQHSRAISLLEEAVLGSPDNPDMLTVLGLLYLRVDRPAKAFNYLGRCLIL-----NS 266

Query: 325 VESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIFL 362
            +S   ++  ++  E G    A  K  +A+   P     L
Sbjct: 267 SDSRATMAAASIMQENGEFGVALNKYRVAVPKLP-SSACL 305


>gi|321311728|ref|YP_004204015.1| hypothetical protein BSn5_01770 [Bacillus subtilis BSn5]
 gi|320018002|gb|ADV92988.1| hypothetical protein BSn5_01770 [Bacillus subtilis BSn5]
          Length = 423

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 16/253 (6%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC 165
              +  +    NE ++     ++  A+  Y  A +  +   +         V+    ES 
Sbjct: 122 QKLLQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESL 181

Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+   A  +  KA+D +PD       +      A + +  +    ++  + KE + +
Sbjct: 182 SASGEFEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPS 236

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L +  S     +G    +   A E ++  + +    + AAK  +   K  + + +L+
Sbjct: 237 YTSLYMPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQ 296

Query: 285 KIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +   ++P      H  +A    +   E+    +     +    +E  +    ++    E+
Sbjct: 297 EALVLDPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTEL 353

Query: 339 GSIDQAHAKAMLA 351
              ++A      A
Sbjct: 354 EQYEEAKQSFEAA 366



 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 5/127 (3%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            LI  +++  + G+     +   ++ K   +   A   AA+         KA  ++  + 
Sbjct: 3   TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLYYEWGDVEKAISLISDLH 60

Query: 288 KVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            + P+  E+ N Y  LL +       L     + E +    ESL++++ +    G  + +
Sbjct: 61  DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS 120

Query: 345 HAKAMLA 351
             K + A
Sbjct: 121 EQKLLQA 127


>gi|319781537|ref|YP_004141013.1| Tetratricopeptide TPR_1 repeat-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317167425|gb|ADV10963.1| Tetratricopeptide TPR_1 repeat-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 280

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 10/133 (7%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             +   A    +  +Q+  T   A     L ++S   G    A    + A+ ++PDA   
Sbjct: 147 AGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQ--GQHKFAIEDFSTAISLAPDAAEP 204

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                  Y+   +   A +  N   K + K            ++L    +GD   +    
Sbjct: 205 YNGRGLSYLATNDEDNAFSDFNMAIKLDGKNAEAW-----ANQALIYERRGDKAKAAKSY 259

Query: 250 IESLKLCDNSIMA 262
            E+++L      A
Sbjct: 260 KEAVRLDPTYQPA 272


>gi|297161762|gb|ADI11474.1| hypothetical protein SBI_08356 [Streptomyces bingchenggensis BCW-1]
          Length = 446

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G  + A   A +A  + P  P V   +     L  + + A   L + +K+A     + A 
Sbjct: 166 GRYDEAYAAARRADSLRPGIP-VFTRLAYVLELRGDPAGARRVLLRARKSA-TAPGDVAY 223

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +  A       +G    +     ++L+     + A     ++  +      A   LE++ 
Sbjct: 224 VATALGQLAWSQGQFPRARGHFADALRADPGYLPALEGRGRTHAAVGDLDAAARDLEEVV 283

Query: 288 KVNPHP----EIANIYTHLLSENTVGK 310
           +  P P     +  +Y     + T  +
Sbjct: 284 RRYPLPAELAALGEVY-EARGDRTRAR 309


>gi|240139236|ref|YP_002963711.1| hypothetical protein MexAM1_META1p2664 [Methylobacterium extorquens
           AM1]
 gi|240009208|gb|ACS40434.1| Hypothetical protein MexAM1_META1p2664 [Methylobacterium extorquens
           AM1]
          Length = 764

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 53/184 (28%), Gaps = 8/184 (4%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++ A  +  A      V       +E     +   +AL   +   A    E +    +  
Sbjct: 31  ALNAGRLDEAEHQARSVLAAR--PHEPTALDVLGCVALNRGRPEEALAHFERVRATRSKD 88

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
               ++L     + G   SA R+  KA ++ PD         +       ++ A      
Sbjct: 89  PLLQFNLGEAHRQTGAPGSALRHFRKAAELRPDFAEAHGQAGEMLRALGRFTEAAKAYQS 148

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                 E     A  L   +L    +G+   +      +L+     +  +   A    + 
Sbjct: 149 ALMLKPEL----AHCLAGFALLLVREGEFGQAVPFFEAALRATP--VTMAPARAPLWANL 202

Query: 274 NKKR 277
              R
Sbjct: 203 GSAR 206


>gi|73989452|ref|XP_534177.2| PREDICTED: similar to CG5038-PA [Canis familiaris]
          Length = 1013

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 8/123 (6%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  + + EW                     A +        ADKG+  A+     E++
Sbjct: 726 MLRCMIRSGEWRNEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 781

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR
Sbjct: 782 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 837

Query: 314 ALR 316
              
Sbjct: 838 FEA 840


>gi|88706342|ref|ZP_01104048.1| adenylate/guanylate cyclase protein [Congregibacter litoralis KT71]
 gi|88699493|gb|EAQ96606.1| adenylate/guanylate cyclase protein [Congregibacter litoralis KT71]
          Length = 728

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 10/146 (6%)

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           ML     +   +     ++     + SA     +ALD+ P              L K  +
Sbjct: 324 MLANAQYQSAGMQG--RQAM----ILSASELVAEALDLDPQLAEAHGMSALLLSLQKRNA 377

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A   +++  +    + R  A L    +     + D   +     ++++L        + 
Sbjct: 378 EARAAVDRAIELRPSYARAYATL----ASLLYAEADFDGALAQIRKAIELDPQEDSFRLQ 433

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291
            A+SL S ++  +A  ++++  K NP
Sbjct: 434 LARSLWSVSRAEEAVAMVKESIKRNP 459



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI------- 271
            +       +L  + +E   +     +     E++ +  N  MA +  A +         
Sbjct: 278 PDLEAYEKFILGKQQMEQQSRPAAENAKRLFQEAIDIDPNYAMAYVMLANAQYQSAGMQG 337

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIY--------THLLSENTVGKLKRALRLEEINKE 323
            Q     A  ++ +   ++  P++A  +            +      + RA+ L      
Sbjct: 338 RQAMILSASELVAEALDLD--PQLAEAHGMSALLLSLQKRNAEARAAVDRAIEL---RPS 392

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              +   ++ +       D A A+   A+++ P+++ F L
Sbjct: 393 YARAYATLASLLYAEADFDGALAQIRKAIELDPQEDSFRL 432


>gi|317037649|ref|XP_001398829.2| DnaJ and TPR domain protein [Aspergillus niger CBS 513.88]
          Length = 740

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 90/290 (31%), Gaps = 48/290 (16%)

Query: 82  DKGYKALYTG--------LMSIAAH-----NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
           D+  + L  G        LM+  A      +    +     +S       +    ++  +
Sbjct: 379 DQARQLLGQGVKEPRKWTLMTAEAQLKMGNDNSYGKAQDIAISMLRVNSQDPDALMIRAR 438

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A + L+M L +                   D+ +A +       +     
Sbjct: 439 AFYGMGDTEQALKLLKMCLGLDP-----------------DMKAAIKLLRTVQKLVRTKE 481

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A       AK++ RAI    +      +     A +L  R+    +  +  ++  D
Sbjct: 482 EGNTAF-----KAKDYRRAIDLWGEALTVDPKNKDQNAKILQNRAQAYINLKEYDSAVAD 536

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             E+L+L    + A    AK+        +A    + + + NP             +   
Sbjct: 537 CNEALRLDPGYLKAQKMRAKAHGGAGNWEEAVRDYKAVAESNP-----------TEKGIQ 585

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            +++RA    E+ K   +    +  ++ + G  +   A   +A++  P K
Sbjct: 586 EEIRRAEF--ELKKAQRKDYYKILGVSKDAGEQEIKKAYRKMAIQYHPDK 633



 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 64/183 (34%), Gaps = 26/183 (14%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               ++RAI    +  + +       ++ L  R+         +A+  D   + +L   +
Sbjct: 257 KDGNYARAIEEFTKALEISPNS----SVYLSNRAAAYMAANQYLAALEDCERACELDPTN 312

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
                  A+ L S  +  +A  +L    ++ P              +   +   A ++  
Sbjct: 313 TKIMYRLARILTSLGRPTEALDVLS---RIEP------------PASATDRAA-AEKMLR 356

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHNTD 376
              ++ E+L     +++ +  +DQA       +K       + L+   AQ++  N ++  
Sbjct: 357 FVSQAEEALSQDRGVSMVLFCLDQARQLLGQGVKEP---RKWTLMTAEAQLKMGNDNSYG 413

Query: 377 KIL 379
           K  
Sbjct: 414 KAQ 416


>gi|303248804|ref|ZP_07335055.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ]
 gi|302489816|gb|EFL49746.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ]
          Length = 567

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 78/263 (29%), Gaps = 41/263 (15%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            ++     A E    ML   A        L     R    + A +         P     
Sbjct: 230 ESQGDLAGAEEAYRKMLSQDAGSPEVQARLLRVLLRRKQPDQALKLLRDEAPDKPHLLDA 289

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADK----- 239
             A ++     +   +A+  L      + +    +A+L         ++LE         
Sbjct: 290 MSAFLEAGYTKQA-RQALDMLVAADPGSPDLPFYKAVLAYEGDKNPKKALEILAAVAPDN 348

Query: 240 -----------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                            GD   +     E+     +        A  L  +    +A  +
Sbjct: 349 PNYDKSLSFRIQIATELGDYAKAEGLVREARTRYPDRKEFIAVEAALLDKRGDTAQAAKV 408

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLVIVS-KI 334
           LEK    +P  ++  +Y + +    + KLKR         ++   +  + ++L  +   +
Sbjct: 409 LEKALAASPD-DLDLLYRYGV---ALEKLKRRGEAKAVMEKIVAKDPVNPDALNYLGYSL 464

Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357
           A E   +D+A     LA+   P 
Sbjct: 465 AEEGRDLDKAVDMIRLALSKEPD 487



 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 78/270 (28%), Gaps = 15/270 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISP 185
             +     ++  A + L  + +           L  ++   +G    A     +A+D   
Sbjct: 159 ASLLEDAGKHKEALQVLSRIPEADRDAATCY--LMAKAMAGLGRNAKAVTLLRQAVDKDQ 216

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   +        + + A     +           +A            +     +
Sbjct: 217 TLLPAWLDLGGLLESQGDLAGAEEAYRKMLSQDAGSPEVQA----RLLRVLLRRKQPDQA 272

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304
                +      +     + A  + +     ++A   L+ +   +P  P++      L  
Sbjct: 273 LKLLRDEAPDKPHL----LDAMSAFLEAGYTKQARQALDMLVAADPGSPDLPFYKAVLAY 328

Query: 305 ENTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           E      K    L  +  ++    +SL    +IA E+G   +A      A    P ++ F
Sbjct: 329 EGDKNPKKALEILAAVAPDNPNYDKSLSFRIQIATELGDYAKAEGLVREARTRYPDRKEF 388

Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           + +         +T +     + AL A PD
Sbjct: 389 IAVEAALLDKRGDTAQAAKVLEKALAASPD 418


>gi|289627920|ref|ZP_06460874.1| TPR domain-containing protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647285|ref|ZP_06478628.1| TPR domain-containing protein [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330868896|gb|EGH03605.1| TPR domain-containing protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 556

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 74  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 246

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|260942649|ref|XP_002615623.1| hypothetical protein CLUG_04505 [Clavispora lusitaniae ATCC 42720]
 gi|238850913|gb|EEQ40377.1| hypothetical protein CLUG_04505 [Clavispora lusitaniae ATCC 42720]
          Length = 681

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 12/195 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQI 149
           G     A      + + +Y      F   +L  L L +Q        N+A E L    QI
Sbjct: 404 GFAHTFALEGEHEQAISAYAFAARLFPGTHLPNLFLGMQHLQM-NNVNLAEEYLLASYQI 462

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------LAK 202
             T    +  L         L  A+ Y  +ALD +      ++  +  +         + 
Sbjct: 463 CNTDPLLLNELGVIKYHKNSLQKAESYLQEALDAAKYLNSDSQIWISIHCNLGHVYRRSN 522

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +  +A+  LNQ  K     +RN + +L +  L     GD   + +   ++L L     +A
Sbjct: 523 QPYKALDCLNQAFK---LSHRNDSNILSSMGLLYLKLGDTSKAINVLHDALALSPADPVA 579

Query: 263 SICAAKSLISQNKKR 277
           S    ++L S     
Sbjct: 580 SDLLKRALESNKDVS 594


>gi|260787465|ref|XP_002588773.1| hypothetical protein BRAFLDRAFT_89799 [Branchiostoma floridae]
 gi|229273943|gb|EEN44784.1| hypothetical protein BRAFLDRAFT_89799 [Branchiostoma floridae]
          Length = 1713

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 21/156 (13%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A RY   AL+I   A W+   + +       + +A+  + +  K     + + A 
Sbjct: 836 GDERQAIRYYENALEIYTYATWIR--LGEHRQAISHYEQALQ-MYRSIKGQNSAHLHIAS 892

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLC----------DNSIMASICAAKSLISQNKKR 277
            LI         GD I       E+LK+            +          +       R
Sbjct: 893 SLIGLGGATLVLGDYIKGISYIEEALKMLMSIHGQSIAHPHIAPILNFLGLACGKVGDHR 952

Query: 278 KAEVILEKIW--------KVNPHPEIANIYTHLLSE 305
           KA     +          +   HP+IA     L  E
Sbjct: 953 KATRCFRQALQMYRTIHGQTAAHPQIALSLRGLAGE 988


>gi|188533762|ref|YP_001907559.1| tetratricopeptide repeat protein [Erwinia tasmaniensis Et1/99]
 gi|188028804|emb|CAO96666.1| Predicted N-acetylglucosaminyl transferase, similar to conserved
           hypothetical protein YciM [Erwinia tasmaniensis Et1/99]
          Length = 389

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 9/161 (5%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  + A++   + +D +     
Sbjct: 83  GEVDRAIRIHQALMESASLTYDQRLLAVQQLGRDYMAAGFYDRAEQMFGQLVDETDFRVG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
             + ++  +    +W  AI    +  K  K+  +   A      +L+     D+  +   
Sbjct: 143 ALQQLLIIHQATSDWLNAIETAERLVKLGKDRLKMEIAHFYCELALQAMGSDDLERAMGL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK 285
             +      NS   SI   +  +++ +  KA    + ++E+
Sbjct: 203 LKKGESADKNSARVSIMMGRIYMAKAEYAKAVQHLQRVIEQ 243


>gi|119497099|ref|XP_001265316.1| UDP-N-acetylglucosaminyltransferase [Neosartorya fischeri NRRL 181]
 gi|119413478|gb|EAW23419.1| UDP-N-acetylglucosaminyltransferase [Neosartorya fischeri NRRL 181]
          Length = 1661

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 13/153 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y+ A      ++   AT   A+ +L      +     A ++  +A+ + P      E 
Sbjct: 567 GDYHKAMRWYSRIIARDATHVEAISNLAATLLALDRREEALQHWLRAVKLRPSFFEAVEH 626

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD----MIASYHDA 249
           ++     +     A+  ++  + + +             + E     D     + SY  A
Sbjct: 627 LIGLLCSSHRGKEAVNIIDYVQNSLRFPKNGDCFTTDEHASETESDADSGASSVGSYEKA 686

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             S    D+         +SLI   K  +A  +
Sbjct: 687 --SFDYDDDF-------GRSLIGNRKPSEASAV 710


>gi|262197748|ref|YP_003268957.1| hypothetical protein Hoch_4573 [Haliangium ochraceum DSM 14365]
 gi|262081095|gb|ACY17064.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
            14365]
          Length = 3590

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 4/176 (2%)

Query: 104  RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLY 161
            R + SY        +E        Q+      +++A + +  +++     +++ A+Y   
Sbjct: 2688 RAIESYKDALTFDPDEPSALDALGQLYEKISDWDMAIDAMSQLVRITDSPSKQVALYHRI 2747

Query: 162  --FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
                +  + D    +    +AL I        E +V+ Y    +W +A   + + + +  
Sbjct: 2748 GRVYASELHDYEQGEAQFLRALSIDTTHVPTMEELVRLYSERGDWLKAAQMMVRAENHTD 2807

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                   +L  A  +   +  D   S       + L    + A+   A     + +
Sbjct: 2808 SVLDKIRLLYQAARIYLDELRDREQSKQYLAAVIALDPEHVGAAEPLADIYFREEQ 2863



 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 6/165 (3%)

Query: 127  VQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFES--CRIGDLNSAQRYATKAL 181
             ++   +++++   E      M    PATR   +Y    E    ++ D + A      AL
Sbjct: 2639 ARLYRQDQKWDPLIETYRNHIMAASDPATR-IELYCAMGEVYDEQLEDPDRAIESYKDAL 2697

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
               PD P   +A+ Q Y    +W  AI  ++Q  +     ++  A+      +  ++  D
Sbjct: 2698 TFDPDEPSALDALGQLYEKISDWDMAIDAMSQLVRITDSPSKQVALYHRIGRVYASELHD 2757

Query: 242  MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                    + +L +    +       +    +    KA  ++ + 
Sbjct: 2758 YEQGEAQFLRALSIDTTHVPTMEELVRLYSERGDWLKAAQMMVRA 2802



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 92/318 (28%), Gaps = 47/318 (14%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           MH     +     E L+ L E +I   E   + A +  E+                  + 
Sbjct: 305 MHLLEVYEKRRDWEKLIGLREREIEGIEDPLDRAEKTYEVAK--------------LAAT 350

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+        +  K L   P        + + Y  +K W +      ++   A +     
Sbjct: 351 RVKKPEVCIHWWEKVLATDPAHEEAIGELYKLYERSKSWEKLAEICEKQANIAPDEKTQA 410

Query: 226 AILLIARSLENADKGDMIASYHDAIE------SLKLCDNSIMASICAAK-------SLIS 272
             L     L      D   + H            +   +++     A K          S
Sbjct: 411 DSLQKLGLLYTDKIEDTDKAIHAWRRLLLLDNENRRAQDALKKLYIANKDWTALEDFYRS 470

Query: 273 QNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEINKESV 325
           Q K  +   +LE+  +     +       IA  Y   + ++    ++   ++  +++ ++
Sbjct: 471 QGKLDEFVRVLERQVEAGDEEDRLPLAMKIAVTYRDEIEKSDRA-MRAFEKVLSLDENNL 529

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMK------IAPRKEIFLL--LAQIEQANSHNTDK 377
           E+    ++  + +    +   K +  ++        P   +     LA+  +    +   
Sbjct: 530 EA----AEALIPIYEEGRDPRKLVRVLEIQLEQTEEPELRVARTKQLAEYSEEKLRDKGA 585

Query: 378 ILYWTQSALHAMPDPLWI 395
              W   A        W+
Sbjct: 586 AFGWYLKAHEGEHRAEWV 603


>gi|222529576|ref|YP_002573458.1| tetratricopeptide repeat-containing protein [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456423|gb|ACM60685.1| Tetratricopeptide TPR_2 repeat protein [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 294

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 7/202 (3%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L       G+   A+      L   P        +    + +    +A  +  +  K 
Sbjct: 3   RDLVLHYLESGNYKKAREVIQNILQEDPLNAEAYIQLSAIELESGNLKKAEDYAKEALKI 62

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                   A+L          + D   +    +++LK+ +  +    C ++ LI      
Sbjct: 63  DSNNKVAWAVL----GQIYHHQKDYSQAERCYLQALKIDNVYVEVLACYSELLIETGFIE 118

Query: 278 KAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           K   IL+    + P  ++      + +L + N     K   +L   + +      ++   
Sbjct: 119 KGLEILKYAKSLEPTNDLILENEFFVNLYNRNFEKANKTIKKLFTSSSKIGSIYKLLVLY 178

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
            +  G+  +A+  A LA +  P
Sbjct: 179 EVNRGNFKKAYNYAKLAWQEYP 200


>gi|158261713|dbj|BAF83034.1| unnamed protein product [Homo sapiens]
          Length = 741

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568


>gi|124005768|ref|ZP_01690607.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123988836|gb|EAY28442.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 631

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 46/155 (29%), Gaps = 18/155 (11%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQ-----IPATREF--AVYSLY--FESCRIGD--LNSAQ 174
                L +     A E  +  ++      PA       +   Y   ++    D     A 
Sbjct: 470 MGMAYLMKGDNAKAEESFKKAVEIGAGDNPAMTGLLNGIKGYYAIQQATSRDDGKYKEAY 529

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
                A    P+        +   + A ++ +A    N   K         A    A ++
Sbjct: 530 ELLASAASTVPNY---FNKGLAYLLEANDYEQAKASFNAAAKMND----KDATTFYALAV 582

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
             A +G+      +  ++++L  +    ++  A+ 
Sbjct: 583 VAARQGNEGELTQNLKKAVELKSDLKAKALKDAEF 617


>gi|328882730|emb|CCA55969.1| putative secreted protein [Streptomyces venezuelae ATCC 10712]
          Length = 492

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 58/194 (29%), Gaps = 7/194 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIAL-----AERQYNIAHEKLEMMLQIPATREFAVYSL 160
                 ++           L+ Q+AL     A   +  A E  E + +    R  A   L
Sbjct: 106 RAERALRRSLAERPAARGNLDAQLALGALAGARGDWKSAKEWGEKVRKADPKRWPAYPVL 165

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                 +GD  +AQ+      ++   A         Q    + W               E
Sbjct: 166 MDAYNGLGDYAAAQKAMETLEELHSGA--AVRTRASQTFRDRGWREDADAAALDAAALAE 223

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            +  +A  L        ++G+   +      +L+L  +   +    A++L +  +  +A 
Sbjct: 224 TDAEKAASLARLGDLAWERGEPEEALGRYGTALRLVPDHGPSLAGRARALTALGRTDEAL 283

Query: 281 VILEKIWKVNPHPE 294
                     P PE
Sbjct: 284 RDWRAALARLPLPE 297


>gi|322492925|emb|CBZ28206.1| conserved hypothetical protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 1409

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 27/204 (13%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRN 224
            D   A     +A  + P    V E V   +V + ++++        +      A E +  
Sbjct: 952  DPELAATLYERAAAVCPTYLEVAEVVADVFVQSGDYAKGSVYMKRVMRANPSAATEMHMR 1011

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVI 282
             A L    + +    G  +      ++ L +  + + A+  A     L + N       +
Sbjct: 1012 LARLGTGSAWDTMSHGQRMEVMEHLLKGLGVAPDRVAAAFAAGVQSHLTNANDTNVVVSL 1071

Query: 283  LEKIWKVNPHPEIANIYTHLLSENT--------------VGKLKRALRLEEIN-KESVES 327
                      P + +      SE+                  L R  R   +        
Sbjct: 1072 GNLA------PLLLDGVATATSEDAVCFATYVVQTRFQEPQLLNRMYRRALLRFPHHATI 1125

Query: 328  LVIVSKIALEMGSIDQAHAKAMLA 351
            LV  + + +  G    A      A
Sbjct: 1126 LVNYATLCMHSGCHTLARKYIAKA 1149


>gi|291229366|ref|XP_002734654.1| PREDICTED: solute carrier family 16, member 3-like [Saccoglossus
           kowalevskii]
          Length = 502

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 11/96 (11%)

Query: 8   FFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSI--LYFFLFAWILLFAVSRF 64
             +   +      +S+     S+T+ G  +   S FV      + F    + +L  V   
Sbjct: 64  VAISLCMGPIAAALSNRFSHRSVTFIGGVITSMSLFVSAFAPNIAFITVTYGVLVGVGHG 123

Query: 65  FLSCPAM--LFHMLHKRNYDKGYKALYTGLMSIAAH 98
               P+   +     +R       A+  G+ ++ + 
Sbjct: 124 LARTPSAAMVGRYFKRRY------AIANGIAAVGSG 153


>gi|298528185|ref|ZP_07015589.1| response regulator receiver protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511837|gb|EFI35739.1| response regulator receiver protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 449

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 69/197 (35%), Gaps = 19/197 (9%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSLYFESC 165
             + +    ++E  + L      L       A     + + Q+    R+    ++   + 
Sbjct: 245 KKLDKLSPLNHERKIDL--GDTYLRMDNEEEAKANFDQAIRQVQKQARDLISSTIMQIAR 302

Query: 166 RIGD--LNSAQRYATKALD-----ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           ++ D   + + +Y  KA++     +S +  W+   +        +W  AI + +Q  K A
Sbjct: 303 KVRDERPDLSSQYVAKAIEHKGSALSREDIWMFNEIGISLRQQGKWEEAIGYYSQGLKIA 362

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI----MASICAAKSLISQN 274
                    L     +  A       +  +  +++++    +      +   AK   + N
Sbjct: 363 P----MDGGLYYNVGMAYAQGKQYYKALENFQKAVEVSPELVDQYSSVAFNMAKVYQALN 418

Query: 275 KKRKAEVILEKIWKVNP 291
           +   A   L+K  +V+P
Sbjct: 419 RPGDAVKYLKKALEVDP 435


>gi|125598900|gb|EAZ38476.1| hypothetical protein OsJ_22864 [Oryza sativa Japonica Group]
          Length = 955

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 10/96 (10%)

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDA 249
           A + +    + WS+AI  L+     +        NRA       L      D   +    
Sbjct: 6   AELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALE-- 63

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                L    + A +   K+L +  K+ +A  + E+
Sbjct: 64  -----LDPALLQAYVLKGKALSALGKREEALAVWEQ 94


>gi|119629448|gb|EAX09043.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_d [Homo sapiens]
          Length = 741

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568


>gi|118766328|ref|NP_001073137.1| transmembrane and TPR repeat-containing protein 4 isoform 2 [Homo
           sapiens]
 gi|134035049|sp|Q5T4D3|TMTC4_HUMAN RecName: Full=Transmembrane and TPR repeat-containing protein 4
 gi|117644870|emb|CAL37901.1| hypothetical protein [synthetic construct]
 gi|306921601|dbj|BAJ17880.1| transmembrane and tetratricopeptide repeat containing 4 [synthetic
           construct]
          Length = 741

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568


>gi|72092893|ref|XP_788690.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115958483|ref|XP_001188894.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 569

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 10/233 (4%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L+E +   A E     +++      A ++L       G+L+SA+    +AL+I P   
Sbjct: 254 TLLSEDEPERAAEYFREAIKLNPHHAKAYFNLANIYNNRGELDSAEALFLRALEIDPQYM 313

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            V   +        +   A  F  Q  +  +      A L    +     K D   + + 
Sbjct: 314 NVLNHLASLKQRQGDVPAAEAFYRQGLEQVEPS----ADLHNNYAAFLMGKDDYQVALYH 369

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI--WKVNPHP--EIANIYTHLLS 304
             + L+L    ++A    A+ L   N+  +AE +  +   +  N      +A IY +  +
Sbjct: 370 CGKCLELEPTHVVAMTNKARVLRHLNRTGEAEDMYIRALSYSNNAKTLQSLAAIYYN--T 427

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +     L+       +   +++  +  +++   +G    A      A++  P 
Sbjct: 428 DRPTQALETYKEALVLEPLNLDIQLQYAQVMTRLGLYKDAELYLSEAVQTKPT 480


>gi|327307674|ref|XP_003238528.1| DnaJ and TPR domain-containing protein [Trichophyton rubrum CBS
           118892]
 gi|326458784|gb|EGD84237.1| DnaJ and TPR domain-containing protein [Trichophyton rubrum CBS
           118892]
          Length = 731

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199
           Q P          Y +    GD + A ++  +AL + PD+  + + +             
Sbjct: 422 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 477

Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                A+++  AI    +  +         + LL  R+  + +  +   +  D   +L+ 
Sbjct: 478 NAAFKARKYREAIDLYTKGLEVDPNNRDINSKLLQNRAQAHININEYDKAIKDCTSALEF 537

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             + I A    AK+        +A   L+ I + NP
Sbjct: 538 DPSYIKARRVRAKANGGAGNWDEALKELKDIAESNP 573


>gi|320162153|ref|YP_004175378.1| hypothetical protein ANT_27520 [Anaerolinea thermophila UNI-1]
 gi|319996007|dbj|BAJ64778.1| hypothetical protein ANT_27520 [Anaerolinea thermophila UNI-1]
          Length = 641

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 81/233 (34%), Gaps = 33/233 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L F+SC   D   A+    +A+D+ P A     ++         ++ A   L Q     
Sbjct: 91  GLLFQSCAAFDP--ARNALERAVDLFPSA-EARFSLGNLLRELGLFADARPLLEQALVED 147

Query: 219 KEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAA------- 267
           ++    RA++  L   +L   ++G +  +   A ++L L  ++I    ++ A        
Sbjct: 148 RQNGTPRAVIRDLDGLTLLALEQGKLEEALPWAEQALALAQSAIPEKDALLATVWLNYGT 207

Query: 268 ------KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKR 313
                 + + ++   R+A  + E+ W+   HP  A     L                ++R
Sbjct: 208 VLRDMNRLVEAEQAHRRALALDER-WRGAEHPATARDAVELSGTLLEMGRIHEARDLVER 266

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           A  L        E    V +    +G I +     + A      ++   + A 
Sbjct: 267 A--LSMDRACYGERHPAVGRDLAHLGEILRVRNALIEA--RQATQQALEIFAD 315


>gi|258544287|ref|ZP_05704521.1| tetratricopeptide repeat protein [Cardiobacterium hominis ATCC
           15826]
 gi|258520467|gb|EEV89326.1| tetratricopeptide repeat protein [Cardiobacterium hominis ATCC
           15826]
          Length = 376

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 17/193 (8%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-RN 224
             G  + AQ      L     A  V  A+   Y   K+W  A+    Q +        + 
Sbjct: 118 AAGMYSQAQALFETLLAAQYRAAEVMPALAHLYERTKQWQAALKLSEQWQAQGYGARGKE 177

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            +      + +  D   + A    A+ + + C   + A+    +  + Q +   A   L+
Sbjct: 178 ISHYYCELAQQAGDDASVAAYLQQALVADRDC---VRANRMRGQLYLRQGEYVNAIHALQ 234

Query: 285 KIWKVNPH------PEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            I + +        PEIA  Y  +  S+   G L++    +  N       + ++   L 
Sbjct: 235 SIGEQSAALLPDVLPEIAEAYRAIGRSDEYRGWLEKVEA-QTKNP-----RLTLALAQLL 288

Query: 338 MGSIDQAHAKAML 350
             +   A A  + 
Sbjct: 289 NDTSPDAAADLLQ 301


>gi|254445427|ref|ZP_05058903.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259735|gb|EDY84043.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 568

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 62/201 (30%), Gaps = 14/201 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G  +       +AL ++P        + + Y    +   A+  L   +         
Sbjct: 353 LKRGLRDEGVELLQQALALAPAHISANRTLAKLYWEEGKKEAALDQLEMLRTLQPTDFAT 412

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           R  L         +KGD  A+     E+ ++   +       A SL+ Q  +   E   E
Sbjct: 413 RMTLGNYY----LEKGDFEAAIAVVEEARRIDPENTDIRNLLALSLMRQGNEEAREGAFE 468

Query: 285 KIWKVNPHPEIANIYTH---LLSENTVGKLKRA-------LRLEEINKESVESLVIVSKI 334
           K   V      A+       L     +  +KR          L E   E     V +  I
Sbjct: 469 KAVAVYSRAIEADASLEEAYLNKVKVLMHIKRFADAEGVVRALMERRPEDPVLSVSLGDI 528

Query: 335 ALEMGSIDQAHAKAMLAMKIA 355
            L  G+   A A     +++A
Sbjct: 529 QLAAGNASGARATWETGLELA 549



 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 5/159 (3%)

Query: 136 YNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           Y  A     E + +       A Y L   + + GDL +A+R   K++ ++PD+       
Sbjct: 70  YAEAEVCYLESISRSDEDAAVAHYLLADIAKQEGDLAAAKRSLAKSIALAPDSLPALLDY 129

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            +    + +   A    N+  K   +  +     L+  +     +     +    +   K
Sbjct: 130 AEVTAKSGDVQAASALYNRVLKKNVDNPK----ALLELARFEMLQNRPEEALPLLLRIAK 185

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
              N I       + L +  ++ KA +I  +I +  P P
Sbjct: 186 RDPNYIDGITLLTQVLDTLGEREKASMIRSEISRRKPAP 224



 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 3/134 (2%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A+     +     +GD+ A+     +S+ L  +S+ A +  A+        + A  +  +
Sbjct: 89  AVAHYLLADIAKQEGDLAAAKRSLAKSIALAPDSLPALLDYAEVTAKSGDVQAASALYNR 148

Query: 286 IWKV---NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           + K    NP   +      +L       L   LR+ + +   ++ + +++++   +G  +
Sbjct: 149 VLKKNVDNPKALLELARFEMLQNRPEEALPLLLRIAKRDPNYIDGITLLTQVLDTLGERE 208

Query: 343 QAHAKAMLAMKIAP 356
           +A        +  P
Sbjct: 209 KASMIRSEISRRKP 222


>gi|220907546|ref|YP_002482857.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 373

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 12/212 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--ML 147
            G + + + N+  A  +  Y      + NE   Y +   I L       A         L
Sbjct: 125 RGSIQLESGNLQGA--LADYNQVIRLYPNEANAYFIRGAIQLQLDNLQGAIADFNRGIKL 182

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                + + +          G+   A     + + +SP+ P              +   A
Sbjct: 183 NPNEAKAYFIRGTIQAGL--GNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGA 240

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I   +Q  + +   +         R    A  GD+  +  D  +++KL        +   
Sbjct: 241 IADYDQVIRLSPNCH----CAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARG 296

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            +      ++ A     +  K+N  PE+A  Y
Sbjct: 297 NAHDELGNRQAAIADYNQAIKLN--PELAEAY 326



 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 4/133 (3%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                     D   A     +A+ ++P+                 +  AI  L+Q  K  
Sbjct: 56  GQAKAKYAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAIADLDQGIKLN 115

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                N A     R     + G++  +  D  + ++L  N   A        +  +  + 
Sbjct: 116 P----NNASAYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQG 171

Query: 279 AEVILEKIWKVNP 291
           A     +  K+NP
Sbjct: 172 AIADFNRGIKLNP 184


>gi|149177146|ref|ZP_01855753.1| hypothetical protein PM8797T_27100 [Planctomyces maris DSM 8797]
 gi|148844038|gb|EDL58394.1| hypothetical protein PM8797T_27100 [Planctomyces maris DSM 8797]
          Length = 967

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 83/277 (29%), Gaps = 70/277 (25%)

Query: 150 PATREFAVYSLYF---ESCRIGDLNSAQRYATKAL----DISPDAPWV----TEAVVQQY 198
             T    V  L     E  + G    ++    +A     +I+P          + +++  
Sbjct: 18  EKTDSLDVKELLKSAYEHQQHGRYEESREVYDQAAKQLGEITPQTAEANLKLQQGLIELD 77

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
            L  + S AI  L    K   +    + +L    +    + G+   ++     +L L  +
Sbjct: 78  RLTGKTSAAIKRLEAAIKQTPD----QPLLHAVGARLTYETGEYNKAHQYVARALALDSD 133

Query: 259 SIMASICAAKSLISQNKKRK-------------------AEVILEKI--------W---- 287
             +A +  A  L    K  +                   AE +L+          W    
Sbjct: 134 QPLAHLIQAHLLTDAGKINEANEGYRWFVRYYNRAQPEDAETLLQIAEGATQYARWNSVS 193

Query: 288 ---------------KVNPHPEIANIYTHLLSENTVGKLKR------ALRLEEINKESVE 326
                          K +P   +A   +++       K  R           +IN  + E
Sbjct: 194 QIFTFVINTVCPDALKADP---LAWQASYISGSILQEKYNRPQAADEFTAALKINPRAAE 250

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             V ++  A+E    D A      A++I PR    LL
Sbjct: 251 VYVALAFSAIESHDFDLAVKMINRALEINPRSIDALL 287



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/271 (10%), Positives = 72/271 (26%), Gaps = 48/271 (17%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESC-RIGDLNSAQRYATKALDISP 185
            A  +     +    + + +      +  A+   Y  +         A+  A   L  +P
Sbjct: 692 TASLKGYRTESTRSFKELQKDYEADQKNLALAGEYAANLLSRRKKQEARELAQSVLSRNP 751

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             P     + +  +L+++   A+  +    K   +       LL         +     +
Sbjct: 752 AQPQAALTIARLELLSEDLPAALAIMQPALKAKTD----DVELLGLAGKILLKQKQYPEA 807

Query: 246 YHDAIESLKLCD---NSIMASICAAKSLISQNKKRKA----------------------- 279
                 + K        +       + L   +K+++A                       
Sbjct: 808 LAIYEAAHKKYPYKTEWLQGLAIIYRHLTEDHKQKEALLKLVHLDPTDVDSMQELMYLYQ 867

Query: 280 -------------EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
                          +   +     H  +A     L       +  R   L +++ ++ E
Sbjct: 868 SEGDLKETLHWGQAALQIDVLDPETHECLAETALKLKQPELAIREYRV--LLQLDGKNTE 925

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   ++    E G   +A  +    +K+ P 
Sbjct: 926 ARYQLANALFESGKKQEAETEVEQLLKLNPD 956


>gi|86156853|ref|YP_463638.1| zinc finger/thioredoxin [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773364|gb|ABC80201.1| zinc finger/thioredoxin putative [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 1139

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 6/201 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +++A  ++P AR   +          +   +    ++  AE     A       L + 
Sbjct: 756 GRLALARGDLPAAR--EALAQAVEKGPRDPAAHAALGELRAAEGDAAGAEAAFRAALALD 813

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           A    AV  L   +   GD+  A+    +AL + P +     A+      A++    +  
Sbjct: 814 AEHAAAVLGLARLAQARGDVAGARAGLVRALALEPRSAEAQLALGTLEWSARD----LEK 869

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +     A +     A  L        ++GD  A+      +      +  A +   ++L
Sbjct: 870 ADAALAAAVDLQPRNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAADAQLWFGRAL 929

Query: 271 ISQNKKRKAEVILEKIWKVNP 291
           +++ +   A V L K   ++P
Sbjct: 930 LARGETPAALVRLRKAVDLSP 950



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 22/280 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  ++A  +   A      +          +      + AL   +   A   LE +    
Sbjct: 511 GEAALARGDAVKAAAAFQRLGGLEQGPRAPMGL---ARAALLRGKPEEARSVLEKVAAAD 567

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           A    A   L   +   GD++ A+        ++P      +  +     A+        
Sbjct: 568 AAYLPARLELAALAEAAGDVDGART------QLAPVLADAAQPRLAPLERARARMVEAAL 621

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI------ 264
           L++    A +  +     L A     A +  ++       ++      S   +       
Sbjct: 622 LDRSAATAADAEKALLAALEADPRLAAARAALVRQRLRRGDAAGAVAASDPVAAEAASDP 681

Query: 265 ----CAAKSLISQNKKRKAEVILEKIWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRL 317
                  ++L    +   A  + ++   V P  P +  A       +             
Sbjct: 682 ALAAARVRALALAGRALDAARLADQALGVAPGTPALLVAKAVALSAAGKPQEAAAAYAEA 741

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +  +VE  V + ++AL  G +  A      A++  PR
Sbjct: 742 LARDAGAVEPRVALGRLALARGDLPAAREALAQAVEKGPR 781


>gi|66524297|ref|XP_393964.2| PREDICTED: transmembrane and TPR repeat-containing protein
           CG4050-like isoform 1 [Apis mellifera]
          Length = 996

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 27/240 (11%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  P+   
Sbjct: 578 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 633

Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  ++Q+   A+    A   L +  +  K+ N  R    +   +   D  D  ++ 
Sbjct: 634 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 689

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299
                ++ L ++   A    A  L  + +  +A   L +   V  HP+       + +IY
Sbjct: 690 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 747

Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             ++   +      R  R+ +++  +++ L  +  + +E G +  A      A  +AP +
Sbjct: 748 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLERAAALAPHQ 805


>gi|332139991|ref|YP_004425729.1| Thioredoxin domain-containing protein [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550013|gb|AEA96731.1| Thioredoxin domain-containing protein [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 289

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 11/148 (7%)

Query: 140 HEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
            +++  ML      P     A      ++ + G+   A   A +AL ++PD       ++
Sbjct: 106 EQQIREMLTKYLPNPEDELLATAG---KAIQQGEYAEALPAAKEALSLNPDNVNAKYMLI 162

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             Y+       A   L    K   + +R +++       E A     I     A+E+   
Sbjct: 163 DCYIETGSIDTAKALLE-DIKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVIL 283
                   I  A  L   NK + A  +L
Sbjct: 222 DLQL---KIDLAIQLQQANKAQDALALL 246



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 3/104 (2%)

Query: 291 PHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+PE   +A     +        L  A     +N ++V +  ++    +E GSID A A 
Sbjct: 118 PNPEDELLATAGKAIQQGEYAEALPAAKEALSLNPDNVNAKYMLIDCYIETGSIDTAKAL 177

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                 +        L  +IE A        +   Q+A+ A PD
Sbjct: 178 LEDIKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221


>gi|300122485|emb|CBK23055.2| Tom70 [Blastocystis hominis]
          Length = 526

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 34/124 (27%), Gaps = 7/124 (5%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A     A    +   +       +   L +            A +  E + +    RE 
Sbjct: 233 GAFEAAYADFCEAAKEEAKCSDRSH-ALLEKATFLTLSGDQREARKIFEALFE-AGMREV 290

Query: 156 AVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            +  L   +     +G+   A     +A+   P          Q  ++  E  +A   L 
Sbjct: 291 NL--LVKFASCLLELGEETRAHELFDEAVSAFPKEVDAWFHRGQMRLVEGELKKAREDLQ 348

Query: 213 QKKK 216
           +  K
Sbjct: 349 RVVK 352



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 43/148 (29%), Gaps = 13/148 (8%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +   A E  E  L       + +          G   +A     +A          + A+
Sbjct: 206 KRIEAGEAAEPSLGD----LYLMRGGLR--KSKGAFEAAYADFCEAAKEEAKCSDRSHAL 259

Query: 195 VQ---QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++      L+ +   A        +           LL+  +    + G+   ++    E
Sbjct: 260 LEKATFLTLSGDQREARKIFEALFEAGM----REVNLLVKFASCLLELGEETRAHELFDE 315

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++      + A     +  + + + +KA
Sbjct: 316 AVSAFPKEVDAWFHRGQMRLVEGELKKA 343


>gi|317046355|ref|YP_004114003.1| cellulose synthase operon C domain-containing protein [Pantoea sp.
           At-9b]
 gi|316947972|gb|ADU67447.1| cellulose synthase operon C domain protein [Pantoea sp. At-9b]
          Length = 1163

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 7/199 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL +   N A  +      I  +  +A+  L   +    D   A+RY   AL I      
Sbjct: 368 ALKKGDLNGAERQYRNAQAIDNSDSWALIGLGDVAQARHDPAQAERYWQLALRIDRGNTT 427

Query: 190 VTEAV--VQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSLENADKGDMIAS 245
               +  + Q          I  L   ++          R+  L A +   A++G    +
Sbjct: 428 AVRRLAGLYQQQSPARAMAFINALPAAQQRGLADTLRTLRSDSLRAEADALAEQGQWHQA 487

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT--HL 302
                ++ +   + I  S   A +L +     +   ++E + + +P  P     +     
Sbjct: 488 VVKYRQAAQDTPDDIWLSYRLAGALRNSGDAAQGRAVMESMVRQHPQEPSALYAWALWLS 547

Query: 303 LSENTVGKLKRALRLEEIN 321
             +     L    RL +  
Sbjct: 548 SGDEDDAALAALNRLPQAR 566



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 99/326 (30%), Gaps = 55/326 (16%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + A+  G  ++   ++  A + +          +  L+ L    +A A      A    +
Sbjct: 359 WLAINNGDNALKKGDLNGAERQYRNAQAIDNSDSWALIGL--GDVAQARHDPAQAERYWQ 416

Query: 145 MMLQIPATREFAVY---SLYFE---------------SCRIGDLNSAQR-----YATKAL 181
           + L+I      AV     LY +               + + G  ++ +         +A 
Sbjct: 417 LALRIDRGNTTAVRRLAGLYQQQSPARAMAFINALPAAQQRGLADTLRTLRSDSLRAEAD 476

Query: 182 DISPDAPWVTEAVVQQYVLAKE-----WSRAITFLNQKKKNAKEWNRNRAIL-------- 228
            ++    W  +AVV+    A++     W      L    +N+ +  + RA++        
Sbjct: 477 ALAEQGQW-HQAVVKYRQAAQDTPDDIWLSYR--LAGALRNSGDAAQGRAVMESMVRQHP 533

Query: 229 ----LIARSLENADKGDMIASYHDAI----ES------LKLCDNSIMASICAAKSLISQN 274
                +         GD   +   A+    ++       +L D      + A  + +   
Sbjct: 534 QEPSALYAWALWLSSGDEDDAALAALNRLPQARWDDNMHELADRLNQQKVFARANALRDG 593

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
               A + L +    +P  +I      L   +    L     + + +  + ++ +   + 
Sbjct: 594 GNAAAAIALLQQQPASPRRDITLADWALERGDARSALAGYQHVLKQDAHNNDAALGRIEA 653

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEI 360
            L +    +A             + I
Sbjct: 654 LLALKRPQEARQALQSLPDSVAEESI 679


>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
          Length = 815

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 10/169 (5%)

Query: 133 ERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           + + + A +    +  L    T  +    + F   ++G+   A +    A+ ++P+    
Sbjct: 87  QGEKDKAIQDYNTVIKLNENNTNAYINRGILF--KQLGEHEKALQDYNMAIKLNPNDADA 144

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +        +  +A+   N   K       N A     R +    KG+   +  D  
Sbjct: 145 FNNLGNLLDDQGQKDKALQNFNTAIKLNP----NDATAYYNRGVVFKQKGEKEKALEDFN 200

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            ++K   N I A I        Q +K KA        K+N  P  A  Y
Sbjct: 201 MAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLN--PNYATAY 247



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 76/226 (33%), Gaps = 7/226 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A +     +++        Y+     C +G+   A +     + ++P+     + 
Sbjct: 326 GETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQN 385

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               Y    E   A+   +   K    +    A     R +   ++G +  +  D   ++
Sbjct: 386 RGVLYGEQGEIENALKDFDMAIKLNPNY----ATAYQNRGVLFGEQGQIENALTDFDIAI 441

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGK 310
           KL      A          + +K KA        K+NP+ +IA     L        V  
Sbjct: 442 KLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQA 501

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           L+   +  ++N     +      +  E G I++A     +A+K+ P
Sbjct: 502 LQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNP 547



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 24/154 (15%)

Query: 158 YS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAK----EWSRAIT 209
              LY E    G++  A +    A+ ++P+     +    + +Q    +    +++ AI 
Sbjct: 522 RGVLYGE---QGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIK 578

Query: 210 F----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                    +   K+ +  + +L   +       G+   +  D   ++KL  N   A   
Sbjct: 579 LNPNYATAYQNRGKQSSSRKGVLYKQQ-------GEKEKALQDYHTAIKLNPNFATAYYN 631

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
                  Q +K KA     +  ++N  P  A  Y
Sbjct: 632 RGVLFGEQGEKEKALQDYNEAIQLN--PNYATAY 663


>gi|88799828|ref|ZP_01115401.1| putative regulatory protein [Reinekea sp. MED297]
 gi|88777408|gb|EAR08610.1| putative regulatory protein [Reinekea sp. MED297]
          Length = 508

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 7/132 (5%)

Query: 160 LYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           LY  +        GD    ++ A KA           + V + +     + +A+   +Q 
Sbjct: 314 LYLAASAEVLYQCGDKTHGRQLAEKAHGQMSHPAATLKTVGKIHAFEGRFDQALDCYDQA 373

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQ 273
                       +LL  +++          +  +A +++K L       +I +      +
Sbjct: 374 IAMIPNGGTYHYMLLTLKAI-LFKANREHDALSEAFQAMKMLEPKLSKRAILSLMLYDGE 432

Query: 274 NKKRKAEVILEK 285
            K   AE  L K
Sbjct: 433 RKMTFAERTLLK 444


>gi|253702409|ref|YP_003023598.1| glycosyl transferase family 2 [Geobacter sp. M21]
 gi|251777259|gb|ACT19840.1| glycosyl transferase family 2 [Geobacter sp. M21]
          Length = 1523

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 157  VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            +      + R    ++ +    + +  SP +P    A+      A +W  A+  L Q   
Sbjct: 882  LRG-AKFARRGKLNDAVELMLQEGIRFSPASPAPYLALAGILCEAGKWREALEVLEQ--- 937

Query: 217  NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI-CAAKSLISQNK 275
                 +   A L+  R+ +  + G+   +   A E+  +       ++       + Q +
Sbjct: 938  -VPAGSELAAALMRGRAFK--ESGEPTQTMEAAGEAEAIDPE-APGTLHLKGVLALWQGE 993

Query: 276  KRKAEVILEKIWKVNP 291
              + E +L +   ++P
Sbjct: 994  TERGEELLRRAIALDP 1009



 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 294  EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            E+A   T L       +L    RL +++ E+ E+   +  + L  G   +A   A+   +
Sbjct: 1357 ELARQATELNRGEEAQRL--WHRLLQVHPENAEAYFNLGYLQLCAGEYPKARESALKGAQ 1414

Query: 354  IAP 356
            +AP
Sbjct: 1415 LAP 1417



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 4/126 (3%)

Query: 160  LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            L  ++  +     AQR   + L + P+       +    + A E+ +A        K A+
Sbjct: 1358 LARQATELNRGEEAQRLWHRLLQVHPENAEAYFNLGYLQLCAGEYPKAR---ESALKGAQ 1414

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 +       +      G+   +     E L+   +   A   +   L+ Q +K +A
Sbjct: 1415 LAPGMKE-AAFNLAKCELFLGNTEKARESCREMLEKWPDYPPALSLSCVCLLLQGEKAQA 1473

Query: 280  EVILEK 285
            + +L++
Sbjct: 1474 QHLLQR 1479


>gi|239942030|ref|ZP_04693967.1| hypothetical protein SrosN15_13607 [Streptomyces roseosporus NRRL
           15998]
 gi|291445477|ref|ZP_06584867.1| TPR repeat-containing protein [Streptomyces roseosporus NRRL 15998]
 gi|291348424|gb|EFE75328.1| TPR repeat-containing protein [Streptomyces roseosporus NRRL 15998]
          Length = 424

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 81/265 (30%), Gaps = 13/265 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
              P A         + T  +     +          + + A       + +    E A 
Sbjct: 149 GPRPTAALGLLLTRAELTDRDRAAALVARAWDRFRAGELDAALSDHGRAVAVDPRSERAH 208

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                    +G    A     +A +I+P   W      + Y        A+T L++    
Sbjct: 209 QGRAVILRSLGRHEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRA--- 265

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               + + A+ L +R L     G    +  D   ++ L      A +  ++         
Sbjct: 266 -HALDPSDAVPLGSRGLVRHALGRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPV 324

Query: 278 KAEVILEKIWKVNPHP-----EIANIY-THLLSENTVGKLKRALRLEEINKESVESLVIV 331
            A   L++  ++NP       E   +Y      E  V    RAL L   + E   +    
Sbjct: 325 GALADLDRAEELNPGRAGTEGERGEVYRATGRHEEAVACYGRALAL---DPEYAWAHGSR 381

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356
           +     +G + +A A    A+++ P
Sbjct: 382 ALALEALGRLPEARADLDRALELDP 406


>gi|224023687|ref|ZP_03642053.1| hypothetical protein BACCOPRO_00403 [Bacteroides coprophilus DSM
           18228]
 gi|224016909|gb|EEF74921.1| hypothetical protein BACCOPRO_00403 [Bacteroides coprophilus DSM
           18228]
          Length = 482

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 20/212 (9%)

Query: 165 CRIGDLNSAQRY---ATKALDISPDAPWVTEAVVQQYVLAKE--WSRAITFLNQKKKNAK 219
            + GD+  A +Y   A K  +  P   W+  A            +  A  +L    ++  
Sbjct: 247 MQSGDIEKALKYFLKADKLYNNKPRL-WIVIA----QCYMGLMLFPAAADYLTALLEHPD 301

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRK 278
                +A     R+L +    D  A   D +E+ ++C        +   +  + QN  + 
Sbjct: 302 IPEYEKAYYYEQRALCSLAICDTEACLKD-LEAGRICDPQFPRLYLTYGEYYLVQNDLKS 360

Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESV-ESLVIVS 332
           A+        ++P+ +     IA+        +   +     RLE+   E + E    ++
Sbjct: 361 AQTEFAHAEALDPNKDEMLGLIASTLLRYEYIDEAAR--NYARLEKEYPEKIKEYYGYLA 418

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            +      + +           APR+ +  ++
Sbjct: 419 FLHYLQDDLQKMTEDIAKGYLQAPRELVAGIM 450


>gi|217978527|ref|YP_002362674.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
 gi|217503903|gb|ACK51312.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
          Length = 778

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 4/120 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G L+ A     +AL + P          +   L+ +   A+  LN+             
Sbjct: 279 QGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNKALSIDP----RLP 334

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L  R      +     +  D  E+L++  + + A     ++     +  KA+   +K 
Sbjct: 335 VSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVAAYAGRGQAYEKAGQLPKAKADYQKA 394


>gi|195444547|ref|XP_002069917.1| GK11776 [Drosophila willistoni]
 gi|194166002|gb|EDW80903.1| GK11776 [Drosophila willistoni]
          Length = 702

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 45/131 (34%), Gaps = 4/131 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++A      + A       + +    E A+ +L       G L +A+++   AL++ P 
Sbjct: 448 ARLATDTGNNSKAFHHYHRAIDLYPAYESALMNLGNLYREHGQLETAEKFIRLALEVYPA 507

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P     +       K++S+A+    +       +  N A+          ++     + 
Sbjct: 508 FPVAWMNLGIVQSAQKKYSQALASYERALS----YRANYAVCFYNMGNLYLEQQLYAEAL 563

Query: 247 HDAIESLKLCD 257
           H    ++ L  
Sbjct: 564 HHWQHAVALNP 574


>gi|53724807|ref|YP_102262.1| TPR domain-containing protein [Burkholderia mallei ATCC 23344]
 gi|52428230|gb|AAU48823.1| TPR domain protein [Burkholderia mallei ATCC 23344]
          Length = 626

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 95  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 154

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 155 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 214

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+         + H    +L L     +A    A +L ++ + R A
Sbjct: 215 HF--VAAHFNLGNALDAI--SQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 270

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 271 LPHYERAVGLDP 282


>gi|32645|emb|CAA27244.1| unnamed protein product [Homo sapiens]
          Length = 478

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262
                +    +   A+ ++  +  KG       + ++            +++      +A
Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAE 280
            +  A+  I     RKAE
Sbjct: 343 HLDLARMYIEAGNHRKAE 360


>gi|301763435|ref|XP_002917148.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
           13-like [Ailuropoda melanoleuca]
          Length = 868

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 164 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 223

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 224 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 276

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 277 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 335

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 336 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 393

Query: 360 IFLLL 364
           +   +
Sbjct: 394 VCQYM 398


>gi|298485679|ref|ZP_07003758.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298159705|gb|EFI00747.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 575

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 93  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 149

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 150 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 208

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 209 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSLKR--YPDDKRLRLTYARMLV 265

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 266 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 315


>gi|289192263|ref|YP_003458204.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938713|gb|ADC69468.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 310

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 66/195 (33%), Gaps = 6/195 (3%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSL-YFESCRIG 168
                  +    Y L+  + ++  +   + E    +L++           +      R+G
Sbjct: 64  KALKLKPDYSRAYFLKGVLLMSLGRLKESKEVFLKLLELDKQESNIGAKCITATILMRLG 123

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + + A +      +  P +        +      +   A+    +      E N    + 
Sbjct: 124 EFDEALKILETMFEDYPKSAIAWAEKGEILYSEGKLKEALECFEKAL----EVNPKDYLS 179

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+ +     + G    +     + ++  +  I A +   + LI   +  +A+  +EK  K
Sbjct: 180 LLYKGEILFELGKFREALECFEKIIQKNEKDIRALLYVIQILIFLGRITEAKEYIEKALK 239

Query: 289 VNPHPEIANIYTHLL 303
           +NP+  +  +Y  ++
Sbjct: 240 LNPNSSLLYVYYGIV 254


>gi|225871740|ref|YP_002753194.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225793991|gb|ACO34081.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 393

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 64/205 (31%), Gaps = 13/205 (6%)

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P +      V +     K+W  A                    +          +  
Sbjct: 191 ALDPQSAQAHMLVGEALDEMKDWIGAEREFRAAIAANP----KEPNVHFGLGYLLWTRSQ 246

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIA 296
              +       L     + +A++  A + + ++K   A  +L+K  ++ P     H ++ 
Sbjct: 247 YPEAATQFEAELANDPGNFLATLYLADTDLRRSKPDDALPLLKKAVRMGPGNAMAHRDLG 306

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ--AHAKAMLAMKI 354
            +Y  L  +     +        +  +   +   + ++  +MG +D   A  K +  ++ 
Sbjct: 307 EVYADLNDD--AKAVAEYREAVRLAPKDTNARWRLGRLYRKMGMVDASNAEFKKLQGLQK 364

Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379
           A  + +  ++++     S       
Sbjct: 365 AENERLLQVMSEAPDGKSKAAAPAQ 389


>gi|225450597|ref|XP_002277942.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 574

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 23/204 (11%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A  +  A  +   +  +    NE    +L       E     A +  E M +        
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE-NVTAAKKVFEEMQRQ------G 329

Query: 157 VY-------SLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +        SL    C  G L+ A     K   + + P+      A++  +   K    A
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV-TYNALINGFCKKKMLKEA 388

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMASIC 265
              L+   K     N      LI        +G++  +   A  +E   L  + +  +I 
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLID---GFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 445

Query: 266 AAKSLISQNKKRKAEVILEKIWKV 289
              +L  + + RKA  +L+++++V
Sbjct: 446 V-DALCKKGETRKAVRLLDEMFEV 468


>gi|219126404|ref|XP_002183448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405204|gb|EEC45148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 959

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 18/228 (7%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ ++GD + A+R   + +  +P    +   + + Y      S A   L Q  ++    
Sbjct: 400 KQADQVGDRDLAKRLLQELVVATPHDARLYRRLARMYKEEGNVSAARAILQQGIRDHHAK 459

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N      L + +  +AD      + H   +++++                 + +   A  
Sbjct: 460 NGYLWHGLGSMATSDAD------AKHYWQKAIEVDPALPHPYHSLGTLEHKEGRIANAMK 513

Query: 282 ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKI 334
            L+K     P     H  +  +Y      +     K   R  +         +   ++ +
Sbjct: 514 TLQKGVAYCPTSHRLHHALGELYRDAKMLDMAA--KSYHRAIQHGPPVSHGFAFTGLAYV 571

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTDKILY 380
           A E   I  A      A+ +   + +  ++ LAQ+E++   + D    
Sbjct: 572 AYERDDIHGARRWLRKAIVLNKGRHVNSWVALAQMEES-IGDIDSARA 618


>gi|87125210|ref|ZP_01081056.1| TPR repeat protein [Synechococcus sp. RS9917]
 gi|86166979|gb|EAQ68240.1| TPR repeat protein [Synechococcus sp. RS9917]
          Length = 409

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 56/162 (34%), Gaps = 1/162 (0%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKL 143
           Y+ L    ++++A +   A   +             +   L +   L +++  + A +  
Sbjct: 248 YELLLHLAIALSASDPAAATDAYRQALDLPLDTRLSMGARLNLAALLMQQERLDEAIQLT 307

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
               Q         Y+L     R GD+ +A +   +AL ++P+     + +    +L  +
Sbjct: 308 LTATQRAPEVALGWYNLGLMQRRRGDIAAALQAYERALHLNPEHAETHQNLAVARLLGGD 367

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              A +   +      +  R      +   +E   K D + +
Sbjct: 368 IDGARSGFREAIALLHQQGRPEEAQALRHQVEGMVKLDEVRA 409



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 9/136 (6%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKSLISQNK 275
                 R   +L +A +L  +D      +Y  A++ L L     M +    A  L+ Q +
Sbjct: 241 TNSVSERYELLLHLAIALSASDPAAATDAYRQALD-LPLDTRLSMGARLNLAALLMQQER 299

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVI 330
             +A  +          PE+A  + +L        +    L+   R   +N E  E+   
Sbjct: 300 LDEAIQLTLTA--TQRAPEVALGWYNLGLMQRRRGDIAAALQAYERALHLNPEHAETHQN 357

Query: 331 VSKIALEMGSIDQAHA 346
           ++   L  G ID A +
Sbjct: 358 LAVARLLGGDIDGARS 373



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 15/181 (8%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
           + +  +G   L  GL S+ A   P A    +    +          LL + IAL+     
Sbjct: 213 EGHQGRGLSLLRQGLASLEA--DPNANTPDTNSVSERYE------LLLHLAIALSASDPA 264

Query: 138 IAHEKLEMMLQIP-ATRE-FAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            A +     L +P  TR       +L     +   L+ A +    A   +P+       +
Sbjct: 265 AATDAYRQALDLPLDTRLSMGARLNLAALLMQQERLDEAIQLTLTATQRAPEVALGWYNL 324

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                   + + A+    +      E       L +AR L     GD+  +     E++ 
Sbjct: 325 GLMQRRRGDIAAALQAYERALHLNPEHAETHQNLAVARLLG----GDIDGARSGFREAIA 380

Query: 255 L 255
           L
Sbjct: 381 L 381


>gi|326386623|ref|ZP_08208245.1| tetratricopeptide TPR_4 [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208938|gb|EGD59733.1| tetratricopeptide TPR_4 [Novosphingobium nitrogenifigens DSM 19370]
          Length = 308

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 5/108 (4%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            R  +   R+      G +  +     ++ +L      A + +A     Q     A+  +
Sbjct: 159 QRGAIYADRARALVALGRLDEAGASLTQARRLAPEYAGAFLLSATLARRQKDLVSAQEFI 218

Query: 284 EKIWKVNPH-PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVES 327
           E   ++NPH P I   A +   L   +   + K    +   + +S E+
Sbjct: 219 ESASRINPHDPAIGLEAGVIAVLAGHDEAAR-KSWSSVVSTSPDSPEA 265


>gi|331224468|ref|XP_003324906.1| pol II transcription elongation factor [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309303896|gb|EFP80487.1| pol II transcription elongation factor [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 1095

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 13/169 (7%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-----AQRYATKALDISPDAPWV 190
              A E  +  L+  A        L  ++ R  D  S       + AT A+++S   P +
Sbjct: 56  TRAAMEYWKRDLKQDAISLAN-QGL--QALRDQDRPSECLPLLCQLATYAINLSRGLPTL 112

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSLENADKGDMIASYH 247
                +   +      A   L +      E +R  +   ++L AR+     + +   +  
Sbjct: 113 KLETPEYDTIPPAQPTADETLEKAAHYINEASRIDSRNPLVLDARATLYLAQKNYDQALT 172

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PE 294
              E LK     + A +  A+ L  +   R A  + +++ K+ PH  P+
Sbjct: 173 ACEEILKERPTHLPALLGKARVLFHRKFFRPALKLYQQVLKLAPHVLPD 221


>gi|291404400|ref|XP_002718420.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 1-like [Oryctolagus cuniculus]
          Length = 503

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 67/225 (29%), Gaps = 33/225 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAK-EWSRAITFL 211
                 C   +   A+    KAL+  P+ P       +T   +        + S A +  
Sbjct: 174 GWALLKCGRKNYERAKACFEKALEADPENPEFNTGYAITVYRLDYPAKRPYDVSDAFSL- 232

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            Q  + A   N   A L    +L+  D G+         E+L    +       AAK   
Sbjct: 233 -QPLRKAIRLNPQDAYLKALLALKLQDLGEEAEGRECMEEALAHTSSQTYVFRYAAKFFR 291

Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANIYTH--------------LLSENTVGKL- 311
            Q +  +A   L++  K  P     H +I   Y                      V +L 
Sbjct: 292 RQGRVDEALKYLKRALKATPRSVFLHHQIGLCYREQMIQIKNATHMQPRGRDRENVDRLV 351

Query: 312 ----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                   +   +      + V ++++  E+    +A      A+
Sbjct: 352 QLAINEFQKASVLKPTFELAHVHLAEMYAEIRQYKEAEEHFQKAL 396


>gi|265751368|ref|ZP_06087431.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263238264|gb|EEZ23714.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 273

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              LNQK    +++ +++NR           L AR+    +      +  D  E+ KL  
Sbjct: 167 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 226

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295
           +     +   +  +SQ KKR+A V  EK  ++  P PE+
Sbjct: 227 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 265


>gi|298528424|ref|ZP_07015828.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512076|gb|EFI35978.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfonatronospira thiodismutans ASO3-1]
          Length = 795

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 83/269 (30%), Gaps = 38/269 (14%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           + L   +      ++     A E+ +  L        A  SL     R+G L  A+++  
Sbjct: 561 DSLTLTVSADSLFSQGDTFAALEEYKQALAADENNLLARNSLAICYARLGRLELARQHFQ 620

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +  D   +       +    +   +   A     +      E + + A  L+       +
Sbjct: 621 EITDKDSENLMAWYNLGCVCLKQGDSLEAANLFAKCL----EIDSSHAFSLLRLGQLAEN 676

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             D   +     E+ +  D     +  A + L                WK +        
Sbjct: 677 SADFEKAARCYQEAGQTRDG----AGLAPRHLARL------------AWKQD-------- 712

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ-AHAKAMLAMKIAPR 357
                 E +   L     L + +     SL +++++ L+ G   + A + A  ++ + P 
Sbjct: 713 ----QKEQSREFLH--QALLQ-DPRDAFSLNLMARMYLQSGDDPEIAESLARQSVALRPD 765

Query: 358 KEIFLL-LAQIEQANSHNTDKILYWTQSA 385
              F L LA I +A   +  +       A
Sbjct: 766 VSEFWLDLADIFKARDKSEQEAQA-RARA 793



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 38/113 (33%), Gaps = 2/113 (1%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G + +   +   A  + +   +  + H   L+ L   Q+A     +  A    +   Q  
Sbjct: 637 GCVCLKQGDSLEAANLFAKCLEIDSSHAFSLLRL--GQLAENSADFEKAARCYQEAGQTR 694

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
                A   L   + +      ++ +  +AL   P   +    + + Y+ + +
Sbjct: 695 DGAGLAPRHLARLAWKQDQKEQSREFLHQALLQDPRDAFSLNLMARMYLQSGD 747


>gi|225175599|ref|ZP_03729593.1| Tetratricopeptide TPR_2 repeat protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168928|gb|EEG77728.1| Tetratricopeptide TPR_2 repeat protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 220

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 2/169 (1%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G+ + +   I  A       S+     N+   + +  Q   A  + + A E  +  +
Sbjct: 40  LQHGIRAYSEGQIDQAFLRFQDASEIR--PNDATTHYMLAQSLEAMGREDEAMEHYQQTI 97

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           ++   +    Y+L     R  DL +A+    +AL    +       +   Y   +++  A
Sbjct: 98  ELNPAKAAPYYNLAVIYNRRKDLPAAESQLIEALRQQRNFHGARLMLGGIYHEQEKYEEA 157

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           +  L +  +N               +       +   +     + L+L 
Sbjct: 158 VDELQRLLRNRDLERPLEIRARTFLARTYTAMEETQNAREQWQKILQLD 206


>gi|261420022|ref|YP_003253704.1| hypothetical protein GYMC61_2632 [Geobacillus sp. Y412MC61]
 gi|319766836|ref|YP_004132337.1| hypothetical protein GYMC52_1763 [Geobacillus sp. Y412MC52]
 gi|261376479|gb|ACX79222.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61]
 gi|317111702|gb|ADU94194.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
            Y412MC52]
          Length = 1385

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 120  YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
             L      ++  +  +Y  A +  E  L++  +     + L       G+      +  +
Sbjct: 905  PLSLFRLAELCASLGRYEEAKQHYEACLKVDPSFVLCHFRLAALYEAEGNEERQHTHLLQ 964

Query: 180  ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            A+ ++P         ++Q     E S  +  L   + +A E     ++  +  +L   D+
Sbjct: 965  AVRLAPK-----RVDMEQLAAIAEPSALLRALADARPHAGEAWYYDSLGYVYGALGRRDQ 1019

Query: 240  GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IA 296
                       ++L L  +        A  L+ + ++++A  +LE++     HP+   + 
Sbjct: 1020 EKA-----AVEKALALDPDHHEVLRHWAMVLMGEGRQKEAVKLLEQLMVR--HPDDEPLY 1072

Query: 297  NIYTHLLSENTVGKLKRALRLEEIN 321
             +Y  L  +   G  K   RLE + 
Sbjct: 1073 PLYVALFPKTMRGLGKLRHRLERLK 1097



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 16/195 (8%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY-SLYF 162
           K    + +        L + L  +IA    +Y  A       LQ  P   E   Y  L  
Sbjct: 545 KAEDVLKRVKGKAQSPLYHYLRGRIAFFASRYEEAARYFRTSLQLDPDQPEVWSYFGLA- 603

Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            S   G +      +  A+ + P          V+  +     ++ A  + ++  +    
Sbjct: 604 -SAYAGHIEKGLISSRVAVSLYPGDLFIETNHGVLLFHAKR--FAEARAWFDRLVRR--- 657

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             R  A L   R+  + + G    +      +  L        +  A        + KA+
Sbjct: 658 -ERRDAQLWYERARCDRELGRRRKAERGFCVAKALDPQEPYPYLMLADLYDDDGDREKAK 716

Query: 281 VILEK----IWKVNP 291
            +LE+     W++ P
Sbjct: 717 AVLEEGLAVAWRLAP 731


>gi|30249277|ref|NP_841347.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30180596|emb|CAD85209.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 1165

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 8/132 (6%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A   A +A+ +          + +  + A +   A+    +      + +R + +L  
Sbjct: 365 ETALASAEEAVRLDSQNALAWARLAELQMSAGKSDHALQSAERAVSLDPDLSRTQTVLGF 424

Query: 231 ARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWK 288
           A  L+    +  +  +    ++            I  A+  I +NK  +A  I +E    
Sbjct: 425 AHLLQIDTHRAQVAFARATVLDQADPMPRL---GIGIAR--IRENKL-EAGRIDIETAAS 478

Query: 289 VNPHPEIANIYT 300
           ++P   +   Y 
Sbjct: 479 LDPANSLIRSYL 490



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 8/165 (4%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                + + A+  L+         +      LI RS      G +  +  D   + +L  
Sbjct: 257 QYRQGKLAEALAELDHLLAEELTVD-----ALILRSELLLTTGRVKEALSDLQRTEQLEP 311

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRA 314
            +  A    A   + QN+K++A  +  +  + NP      +A  Y    +      L  A
Sbjct: 312 GNSDALALHAMIFVVQNRKQEALALAGQAVRNNPASSAAKLALSYAQQANFQIETALASA 371

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                ++ ++  +   ++++ +  G  D A   A  A+ + P   
Sbjct: 372 EEAVRLDSQNALAWARLAELQMSAGKSDHALQSAERAVSLDPDLS 416


>gi|332141544|ref|YP_004427282.1| tetratricopeptide repeat protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551566|gb|AEA98284.1| tetratricopeptide repeat protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 389

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 78/245 (31%), Gaps = 19/245 (7%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A +  + ++         RE A+  L  +  + G L  A+    + L+       
Sbjct: 83  GEIDRAIKVHQNLVSRDELQPAQRENALRELGHDYTQAGFLERAENAFLQLLNSEKHYLV 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASY 246
             + +   Y   KEW RAI       +   +  +     A     ++          A+ 
Sbjct: 143 AQQQLFSIYQTTKEWERAIELAEHMVQCHGDNDDVCERLAHFYCEQAAVELKNESQGAAL 202

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYT 300
               +++   ++++   +      + Q +   A     ++      W     P +  I  
Sbjct: 203 TLLQKAVNADEHAVRPWLMLGDIALEQKRFTDANAYFTQVAERDINWFSEAVPSLEKIAE 262

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                ++         LE   +E   S + +  + ++ G   QA    +  ++  P    
Sbjct: 263 ETDDWDSFQ-----KNLEAHWQECATSYLAMVDVLMKRGETAQAAEYLLEQLRKRPTMRG 317

Query: 361 F-LLL 364
           F  L+
Sbjct: 318 FKTLM 322


>gi|325109373|ref|YP_004270441.1| SEC-C motif domain protein [Planctomyces brasiliensis DSM 5305]
 gi|324969641|gb|ADY60419.1| SEC-C motif domain protein [Planctomyces brasiliensis DSM 5305]
          Length = 715

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEIN 321
             A  L    + R A  ILE++   +P           +    E+          L   +
Sbjct: 29  MKALQLHEAGQSRAALKILERLHTQDPARSWVATSLAGVQLFLEDPAAARDALKPLLAES 88

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            +     V+ +  AL++   + A +    A   
Sbjct: 89  PDHPLGRVLDATAALDLNGFEGARSVIHRAFTK 121


>gi|209544340|ref|YP_002276569.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532017|gb|ACI51954.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 648

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 59/195 (30%), Gaps = 19/195 (9%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            +AR+    + Q+    +     LL    A  + ++  A   L   L            L
Sbjct: 26  AIARQCEHILDQE--PDHPGASCLLGTIHAR-QGKFESAIPLLRRALARMPANAEGYNVL 82

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT------FLNQK 214
                  G    A     +A+ I PD       +    V   + + AI        L+ +
Sbjct: 83  GMALRDAGQAEDAIACFRRAVAIRPDHQGARTNLGNALVAGGDRAGAIAQFRALLTLDTQ 142

Query: 215 KKNAKEWNRNRA--------ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
                ++    A        ++ +  +L    + +  A++  A  S     + + A +  
Sbjct: 143 LAAIADYRTALAADPADVETLIRLGAALRTIGRCEEAAAHFQAASSH--APDRVAARLHR 200

Query: 267 AKSLISQNKKRKAEV 281
           A +L    +   A  
Sbjct: 201 AGALAELGRIDDAMA 215


>gi|171057655|ref|YP_001790004.1| tetratricopeptide repeat-containing protein [Leptothrix cholodnii
           SP-6]
 gi|170775100|gb|ACB33239.1| conserved hypothetical protein [Leptothrix cholodnii SP-6]
          Length = 384

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 103/309 (33%), Gaps = 25/309 (8%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +Y  A    + +L         R+ A ++L  +  + G  + A+  A KAL+ +  A  
Sbjct: 85  GEYERAVRVHQHLLARADLPTSERDRAQHALAQDYLKAGLFDRAEA-AYKALEGTAFATD 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  +  A++W  AI      +   A  + +  A       LE    GD  A+   
Sbjct: 144 ARLALLTLHESARDWKSAIEVARGLEATAAGSFAQRIAHYWCELCLEADAAGDGAAADAA 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--N 306
             ++ ++   S    I + + L    +  +A  +   +  V+P       ++ +  +   
Sbjct: 204 LTKAREVAPQSARPLILSGQRLARAGRHTEALGLWTALSTVHP-----EAFSVIAGDYAA 258

Query: 307 TVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL- 364
           +    +RA   L  +    + +      +A      D A  + ML   +   + +   L 
Sbjct: 259 SAQVCQRADEALVRLKALHLAAPSADLLLAALSLESDAAARRRMLVQHLKENQSLSAALK 318

Query: 365 -----AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFE 419
                A     +   +  +      AL  +      +  G+ +  +    P       + 
Sbjct: 319 LLQDPAAAPDDDGGESLAMQQAVGKALRPLRRYH-CAACGFEAQNYFWQCPGCHGWDTY- 376

Query: 420 WKIPTKSPE 428
              P +  E
Sbjct: 377 ---PPRRLE 382


>gi|30584945|gb|AAP36740.1| Homo sapiens interferon-induced protein with tetratricopeptide
           repeats 1 [synthetic construct]
 gi|60653723|gb|AAX29555.1| interferon-induced protein with tetratricopeptide repeats 1
           [synthetic construct]
          Length = 479

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262
                +    +   A+ ++  +  KG       + ++            +++      +A
Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAE 280
            +  A+  I     RKAE
Sbjct: 343 HLDLARMYIEAGNHRKAE 360


>gi|332708799|ref|ZP_08428770.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
 gi|332352341|gb|EGJ31910.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
          Length = 606

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 6/134 (4%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSLYFESC 165
           +     H   N         Q    +++   A     + +   P  T  +    +  +  
Sbjct: 477 ACNDALHFKPNYPEAVWSLGQAFDQQQRSVEALRLYNQALTLKPDLTEAWLSQGITLQKL 536

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G    A     KA+ +  +         +  +    +++AIT LN+  +   E N   
Sbjct: 537 --GRSVEAITALEKAIALQRNLAEAWMTKGEAQMTLGRFNQAITSLNKALQ--IEPNHRN 592

Query: 226 AILLIARSLENADK 239
           A+ L  ++ +   +
Sbjct: 593 ALKLRQQARKKLQR 606


>gi|259415019|ref|ZP_05738941.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
 gi|259348929|gb|EEW60683.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
          Length = 572

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 79/268 (29%), Gaps = 39/268 (14%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-ATKALD 182
           LL+    + +   + A E+ + + +    + FA Y        +GD   A+   A     
Sbjct: 132 LLDAWAYMGKGAVSQALEQFDTVAEQDGLKFFATYHKALALASVGDYEGAEELFAANEGQ 191

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFL---------------NQKKKNAKEWN----- 222
           +   +     A VQ         +A+  L                 K    +        
Sbjct: 192 LGRSSRRAAIARVQVLSQLGRTEQALEVLVDSFGEGFDPALTDLADKLAMGETVGFTITP 251

Query: 223 -----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                       + ++L      D +  Y  A  + KL    + A + +A  L    +  
Sbjct: 252 TPRDGMAEVFFSLGQALSGEAASDYVLMY--ARMAAKLSPAHVDAVLLSAGLLDQMGRY- 308

Query: 278 KAEVILEKIWKVNP--HPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
               +    +K  P  HP+     +        S N     +   +L     + V   + 
Sbjct: 309 ---ELSIATYKQVPRDHPDFHAAELGRAEALRRSANPQAAAEVLEQLARDFPQHVAVYID 365

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +  +  +  +   A      A++++P +
Sbjct: 366 LGDLLRQQENYSDAAKAYSRALELSPEE 393


>gi|303286241|ref|XP_003062410.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455927|gb|EEH53229.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1570

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 32/266 (12%), Positives = 73/266 (27%), Gaps = 44/266 (16%)

Query: 127  VQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
             +  L +     A       L      P  R  ++          G+  +A     +A++
Sbjct: 936  ARFELLQGDAERARGLYRAALLHAEGRPRARAESLRKWAVMEFGAGERVNAAGLFERAMN 995

Query: 183  ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +                        +    +  + A+E   +        +   +     
Sbjct: 996  V------------------------LEEAERAARVAEEGEEDSGAEEEREASSLSSSSSS 1031

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                +DA E        I+A++    +  S    R A+ ++   W            T  
Sbjct: 1032 SGVKYDASE-----PGGIIAALDDPGATESSASLRAAQAVVLHAWSQ----------TKA 1076

Query: 303  LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIF 361
             S   +         E  +  +   +  ++++    G + +A  +  LA    P    I 
Sbjct: 1077 RSGEALEARALLSDAEAKDPSNPRVIHALAQLDEAAGDVLRARERYELAAANFPGDAHIA 1136

Query: 362  LLLAQIEQANSHNTDKILYWTQSALH 387
            L  A++E+    +         +A  
Sbjct: 1137 LSRARLERVAFGDVAAARDIFSAAAE 1162


>gi|194383714|dbj|BAG59215.1| unnamed protein product [Homo sapiens]
          Length = 366

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    +  A ++  
Sbjct: 51  KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 106

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 107 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 166

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+
Sbjct: 167 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 226

Query: 287 WKVN 290
           ++  
Sbjct: 227 YQTE 230


>gi|119629445|gb|EAX09040.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_a [Homo sapiens]
          Length = 760

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 479 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 534

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 535 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 587


>gi|115927386|ref|XP_783739.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115965250|ref|XP_001182952.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 1350

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIAR 232
            + +  +P+        ++      +         +   N          R    L I  
Sbjct: 355 EEEVKANPNNYDAWFDYLRLMETDGDIETVRDLYERAIANIPPAQEKRLWRRYMYLWINY 414

Query: 233 SL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +  E  +  DM  +       L L            +  A+  + Q + +KA  ++    
Sbjct: 415 ATYEELEVRDMEKTREVYKACLDLIPHKKFTFAKMWVLMAQFEVRQKELQKARRVMGTAI 474

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++   Y  +     E    ++    +  E N  +  + +  +++   +G ID++
Sbjct: 475 GKCPKDKLFKSYIEMELQLREFDRCRV-LYEKFLEFNPANCTTWMKYAELETILGDIDRS 533

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 534 RAVYELAI 541



 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 14/188 (7%)

Query: 178  TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIAR 232
             + +  +P+        ++      +         +   N          R    L I  
Sbjct: 995  EEEVKANPNNYDAWFDYLRLMETDGDIETVRDLYERAIANIPPAQEKRLWRRYMYLWINY 1054

Query: 233  SL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
            +  E  +  DM  +       L L            +  A+  + Q + +KA  ++    
Sbjct: 1055 ATYEELEVRDMEKTREVYKACLDLIPHKKFTFAKMWVLMAQFEVRQKELQKARRVMGTAI 1114

Query: 288  KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               P  ++   Y  +     E    ++    +  E N  +  + +  +++   +G ID++
Sbjct: 1115 GKCPKDKLFKSYIEMELQLREFDRCRV-LYEKFLEFNPANCTTWMKYAELETILGDIDRS 1173

Query: 345  HAKAMLAM 352
             A   LA+
Sbjct: 1174 RAVYELAI 1181


>gi|118766330|ref|NP_116202.2| transmembrane and TPR repeat-containing protein 4 isoform 1 [Homo
           sapiens]
 gi|55859640|emb|CAI11007.1| transmembrane and tetratricopeptide repeat containing 4 [Homo
           sapiens]
          Length = 760

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 479 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 534

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 535 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 587


>gi|116534937|ref|NP_001539.3| interferon-induced protein with tetratricopeptide repeats 1 isoform
           2 [Homo sapiens]
 gi|116242522|sp|P09914|IFIT1_HUMAN RecName: Full=Interferon-induced protein with tetratricopeptide
           repeats 1; Short=IFIT-1; AltName:
           Full=Interferon-induced 56 kDa protein; Short=IFI-56K
 gi|13937956|gb|AAH07091.1| Interferon-induced protein with tetratricopeptide repeats 1 [Homo
           sapiens]
 gi|30582173|gb|AAP35313.1| interferon-induced protein with tetratricopeptide repeats 1 [Homo
           sapiens]
 gi|55957848|emb|CAI12379.1| interferon-induced protein with tetratricopeptide repeats 1 [Homo
           sapiens]
 gi|61361742|gb|AAX42096.1| interferon-induced protein with tetratricopeptide repeats 1
           [synthetic construct]
 gi|61361748|gb|AAX42097.1| interferon-induced protein with tetratricopeptide repeats 1
           [synthetic construct]
 gi|119570521|gb|EAW50136.1| interferon-induced protein with tetratricopeptide repeats 1,
           isoform CRA_a [Homo sapiens]
 gi|123993717|gb|ABM84460.1| interferon-induced protein with tetratricopeptide repeats 1
           [synthetic construct]
 gi|123994159|gb|ABM84681.1| interferon-induced protein with tetratricopeptide repeats 1
           [synthetic construct]
 gi|189069497|dbj|BAG37163.1| unnamed protein product [Homo sapiens]
 gi|261861590|dbj|BAI47317.1| interferon-induced protein with tetratricopeptide repeats 1
           [synthetic construct]
          Length = 478

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262
                +    +   A+ ++  +  KG       + ++            +++      +A
Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342

Query: 263 SICAAKSLISQNKKRKAE 280
            +  A+  I     RKAE
Sbjct: 343 HLDLARMYIEAGNHRKAE 360


>gi|262304951|gb|ACY45068.1| acetylglucosaminyl-transferase [Ammothea hilgendorfi]
          Length = 288

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 49/160 (30%), Gaps = 6/160 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   +         H + L  L    I   +     A +  +  L++      A  +L  
Sbjct: 39  AEDCYGTALGLCPSHADSLNNL--ANIKREQGLTEEATKLYQKALEVFPEFAAAHSNLAS 96

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              + G LN A  +  +A+ I P        +       ++   A+    +  +    + 
Sbjct: 97  VLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF- 155

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
              A      +  + D G++  +      +LKL      A
Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDA 192



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+++ P+ P     +            A                + A  L   +    
Sbjct: 10  RRAIELQPNFPDAYCNLANALKEKGLVQDAEDCYGTALGLCP----SHADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +     ++L++      A    A  L  Q K   A +  ++  ++ P    A+
Sbjct: 66  EQGLTEEATKLYQKALEVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++  G L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187


>gi|261419131|ref|YP_003252813.1| AIG2 family protein [Geobacillus sp. Y412MC61]
 gi|319765948|ref|YP_004131449.1| AIG2 family protein [Geobacillus sp. Y412MC52]
 gi|261375588|gb|ACX78331.1| AIG2 family protein [Geobacillus sp. Y412MC61]
 gi|317110814|gb|ADU93306.1| AIG2 family protein [Geobacillus sp. Y412MC52]
          Length = 371

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 39/133 (29%), Gaps = 23/133 (17%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           + A  E +          +L+         Y       R  +   A++   +AL   P  
Sbjct: 39  RFAQLEPENTKLKIWFAQLLRD--------YG-RDIKLRKENYRKARKLFEQALRFDPGD 89

Query: 188 P-----WVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAKEWNRNRAILLIARSLENAD 238
           P     W    +         W  AI      L    K+ + ++  RA+   A +     
Sbjct: 90  PVCRYHWGHLELYD-----GRWKEAIRQFQIVLQSTSKHLEPYHYIRALCSSAIAYNQLG 144

Query: 239 KGDMIASYHDAIE 251
             +   +  D +E
Sbjct: 145 DPETELAILDQLE 157


>gi|167619111|ref|ZP_02387742.1| TPR domain protein [Burkholderia thailandensis Bt4]
 gi|257138346|ref|ZP_05586608.1| TPR domain-containing protein [Burkholderia thailandensis E264]
          Length = 614

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRALALAPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G    A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHGDALAAFRRALELRPGHAGAHNNLGMALAALGDTEEAIAHFRAALAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    +      +L L     +A    A +L +  + R A
Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAQALSAFESALALQPRFPLALFGLANALAALGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  +  L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 312



 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L+ A+     AL  +P                     A   + +      E   
Sbjct: 11  AHRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 66

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A L +         G +  +      +L L     +A      +  +Q +   A    
Sbjct: 67  NDAALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 126

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           ++   + P     H  + N    L        L    R  E+      +   +      +
Sbjct: 127 QRALALAPGDASIHNNLGNALNALGRHG--DALAAFRRALELRPGHAGAHNNLGMALAAL 184

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  ++A A    A+   PR
Sbjct: 185 GDTEEAIAHFRAALAAEPR 203


>gi|147678918|ref|YP_001213133.1| hypothetical protein PTH_2583 [Pelotomaculum thermopropionicum SI]
 gi|146275015|dbj|BAF60764.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 806

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 34/134 (25%), Gaps = 18/134 (13%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-DISPDAPW 189
           +       A +  E    +P               RI    +A     K L +++P    
Sbjct: 675 MVSGNREAAKQYFEKAAAVPG--------------RIEAKMAALNDTEKKLWNVAPLMEP 720

Query: 190 VTEAVVQQYVLA---KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                +           W+ A   L       K   + +    +  +L    +G    + 
Sbjct: 721 TPAVKLNVGASQYLLGRWAEADAGLQAALSGEKTDEKTKGEAFLWLALLRDKQGRPQEAQ 780

Query: 247 HDAIESLKLCDNSI 260
               ++ KL     
Sbjct: 781 EYLAQAQKLAPELA 794


>gi|254255306|ref|ZP_04948622.1| hypothetical protein BDAG_04641 [Burkholderia dolosa AUO158]
 gi|124901043|gb|EAY71793.1| hypothetical protein BDAG_04641 [Burkholderia dolosa AUO158]
          Length = 607

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 6/134 (4%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  ++ R      A      A  ++P  P +       Y+       A   L       
Sbjct: 143 GLAQQAARRHAQ--ALDAYRHAASMNPRLPMLRNNWGAAYLELGRHDEARQLLEATLAED 200

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +     A      +      G +      A  +  L  N + A    +  L    +   
Sbjct: 201 PD----HAFAWTNLASVLLKTGKIDDGLVAAERACALAPNYVTALQTYSYVLREHRQFDA 256

Query: 279 AEVILEKIWKVNPH 292
           A  + ++   + PH
Sbjct: 257 ALEVAQRALGIEPH 270



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 14/143 (9%)

Query: 87  ALYTGL---MSIAAHN-------IPLARKMHSYVSQQH--TFHNEYLVYLLE--VQIALA 132
           A+ TGL    +  A N          AR+    +         N  L  L        L 
Sbjct: 123 AIATGLCRHFAADAGNWFRLGLAQQAARRHAQALDAYRHAASMNPRLPMLRNNWGAAYLE 182

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +++ A + LE  L       FA  +L     + G ++     A +A  ++P+     +
Sbjct: 183 LGRHDEARQLLEATLAEDPDHAFAWTNLASVLLKTGKIDDGLVAAERACALAPNYVTALQ 242

Query: 193 AVVQQYVLAKEWSRAITFLNQKK 215
                    +++  A+    +  
Sbjct: 243 TYSYVLREHRQFDAALEVAQRAL 265


>gi|298243809|ref|ZP_06967616.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297556863|gb|EFH90727.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 1332

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 85/272 (31%), Gaps = 33/272 (12%)

Query: 127  VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             QI      ++ A +   +  +  A    A         R G   +A +   +AL     
Sbjct: 981  GQIYQQCGNFDQALDSYALASRDSAVEVLARVGSAHCYLRQGKPEAAIQQFEQALQAVRR 1040

Query: 187  APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            AP    A++        W+       + ++  +E       + +  +      G    + 
Sbjct: 1041 AP----ALLDPTT----WAA------RPREEGEEHKAPEVEISLLLAQAYRRSGRQDQAE 1086

Query: 247  HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
            +   +  ++   +   +   A+    +     A    E +       ++   Y      +
Sbjct: 1087 NIMRQVKQVRAGNDEVASTLAEISARRPDPSTAVR--EYM-------DLVRHYRQSRQID 1137

Query: 307  TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA----MKIAPRKEIFL 362
                LK    L  +  +  ++   ++ I +  G +D+  A+  L     ++     E   
Sbjct: 1138 NA--LKVLNELVHLAPQEPQAHEELADIYINRGLLDEGIAELRLLVDANLRRNNTAEAAA 1195

Query: 363  LLAQIEQ--ANSHNTDKILYWTQSALHAMPDP 392
             L +I      + ++++ L     A  A  DP
Sbjct: 1196 TLQRIGNIFDETGDSEEALAAFCRA--AELDP 1225



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 80/269 (29%), Gaps = 38/269 (14%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQ--------------------IPATREFAVYSLY 161
            + LL  Q      + + A   +  + Q                     P+T       L 
Sbjct: 1068 ISLLLAQAYRRSGRQDQAENIMRQVKQVRAGNDEVASTLAEISARRPDPSTAVREYMDLV 1127

Query: 162  FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                +   +++A +   + + ++P  P   E +   Y+        I  L          
Sbjct: 1128 RHYRQSRQIDNALKVLNELVHLAPQEPQAHEELADIYINRGLLDEGIAELRLLVDANLRR 1187

Query: 222  NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            N         + + N   + GD   +      + +L  NS+                ++A
Sbjct: 1188 NNTAEAAATLQRIGNIFDETGDSEEALAAFCRAAELDPNSMDLLREVVGFCFRVGHPQEA 1247

Query: 280  EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                   ++      IA  Y    ++     +    +L  I++ + ++  ++ +    +G
Sbjct: 1248 AR-----YQAV----IARHYFE--TQQVKEAVAALQQLITIDRNNFDAYDMLGQTYQAVG 1296

Query: 340  SIDQAHAKAMLAMKIAP-----RKEIFLL 363
              +QA        KI P     R+ +  L
Sbjct: 1297 EYEQASRVYRNLAKINPGSSIARERLATL 1325


>gi|283852957|ref|ZP_06370216.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283571647|gb|EFC19648.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 567

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 21/236 (8%)

Query: 133 ERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           +     A + LE  +   P  R+   Y L          + A +   + L+ +P      
Sbjct: 97  QNDREAATQTLEKGLAAFPGARQLTFY-LANAYQMRRMEDMAVKTLERFLEKNPADAPAL 155

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           + +      + +  +A+  L +            A +L  R+   A  G   A+      
Sbjct: 156 QELASLLEDSGKHEQALAVLGR-----IPEKDRDATVLYLRAKAEAGHGRKDAAMGTLRA 210

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           ++      + A    A  L      + AE             +       L  E+   + 
Sbjct: 211 AVAKDPALMPAWADLAGLLEQAGDLKGAE-------------DCYRKMLSLGEESPEVRA 257

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
           + A  L +  K   +++ ++++ A +      A +  + A      K++  LL  +
Sbjct: 258 RLARILIK-QKNPAQAVSLLAEGAPDKSRFLDAMSALVEAGYPRQAKQVLGLLTAL 312



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 95/341 (27%), Gaps = 64/341 (18%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIP 150
                   A         +          L    +         A +    ML    + P
Sbjct: 196 AGHGRKDAAMGTLRAAVAKDPALMPAWADL--AGLLEQAGDLKGAEDCYRKMLSLGEESP 253

Query: 151 ATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-- 200
             R      L  +            G  + ++     +  +    P   + V+       
Sbjct: 254 EVRARLARILIKQKNPAQAVSLLAEGAPDKSRFLDAMSALVEAGYPRQAKQVLGLLTALD 313

Query: 201 ---------------AKEWS--RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                            + +   A+  L +       ++++    L  R    ++ GD  
Sbjct: 314 PDSPDLPFYKAVLAYEGDKNPREALAILGRVPPENPNYDKS----LAFRIQIASEIGDFG 369

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +     E+ +   +        A  L  +     A  +LE     +P  ++  +Y + +
Sbjct: 370 KAAGLVREARQRYPDRKEFISVEAALLDKRGDTAAAAKVLENALAASPD-DVDLLYRYGV 428

Query: 304 SENTVGKLKRA-------LRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIA 355
               + KLKR         ++      + ++L  +   +A E   +++A +    A++  
Sbjct: 429 ---ALEKLKRRDEAKAVMEKIVAKEPTNPDALNYLGYSLAEEGRDLEKALSMVKTALEKE 485

Query: 356 PRKEIFL---------------LLAQIEQANSHNTDKILYW 381
           P    FL                LA IE+A +H     + W
Sbjct: 486 PDNPFFLDSLAWTLHKLGRANEALAAIERAIAHKVKDAIIW 526


>gi|264676953|ref|YP_003276859.1| hypothetical protein CtCNB1_0817 [Comamonas testosteroni CNB-2]
 gi|299531516|ref|ZP_07044922.1| TPR repeat protein [Comamonas testosteroni S44]
 gi|262207465|gb|ACY31563.1| TPR repeat protein [Comamonas testosteroni CNB-2]
 gi|298720479|gb|EFI61430.1| TPR repeat protein [Comamonas testosteroni S44]
          Length = 595

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 20/279 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI--AHEKLEMMLQ 148
           G M + A   P A +     ++      E     L     L      +    ++      
Sbjct: 208 GHMRLIAGQKPAALQALQNGAK---LGPESGAVALLAMELLESGSAEVEPLVKRYLEKNH 264

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            P  R      L  +          Q    +A    P+ P     +    +   E   A 
Sbjct: 265 SPQLRLTYARVLLGQKRNADAKTQLQLITREA----PEFPEAWVMLANLQLQDGELDAAD 320

Query: 209 TFLNQ------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             L Q      K           + L + R+ + A+K          ++ +    N +  
Sbjct: 321 VSLTQFSALLPKLPEGVGRAAGESQLYLLRA-DLAEKRQRYDEADIYLQRIPDAANLLSV 379

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGKLKRALRLE 318
               A  L  Q K ++A  +++ I    P+     +IA +     +           +L 
Sbjct: 380 QARRADLLARQGKVKEARALIQAIPANGPNQKRLKQIAEVQLLRDAGLNKEAYALQAQLL 439

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               + VE     + +A   G+  +        +K  P 
Sbjct: 440 SQAPDDVELAYDTALLAERAGNFSEMERLLRDIIKRKPD 478



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 55/205 (26%), Gaps = 10/205 (4%)

Query: 100 IPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALA-----ERQYNIAHEKLEMMLQI-PAT 152
             LA K   Y               LL VQ   A     + +   A   ++ +    P  
Sbjct: 351 ADLAEKRQRYDEADIYLQRIPDAANLLSVQARRADLLARQGKVKEARALIQAIPANGPNQ 410

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           +     +        G    A     + L  +PD   +          A  +S     L 
Sbjct: 411 KRLKQIAEVQLLRDAGLNKEAYALQAQLLSQAPDDVELAYDTALLAERAGNFSEMERLLR 470

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              K   ++      L  + +        +  +      +L +       +   A     
Sbjct: 471 DIIKRKPDFKHAYNALGYSYA---DRGIKLEEAQTLIQTALDMQPGDPFITDSLAWVHFR 527

Query: 273 QNKKRKAEVILEKIWKVNPHPEIAN 297
           +    +AE +LE+ +      EIA 
Sbjct: 528 RGNLDEAEKLLEQAYATRQDAEIAA 552


>gi|255065140|ref|ZP_05316995.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
 gi|255050561|gb|EET46025.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
          Length = 627

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 22/183 (12%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           AR+++        F       LL  +I L +     A     MML    + E A  +L  
Sbjct: 60  ARRVNIQNRANQIF------TLLSGEILLQKGDAGTALATYMMMLNNTKSPEVAERAL-E 112

Query: 163 ESCRIGDLNSAQRYATKALDISP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +  +     A+    K  +I P          W+   ++       +  + +  L+   
Sbjct: 113 MAVSLNAFQQAEMIYQKWREIEPVPGNAQKRMTWLRNILL------GQGDKTLNGLDDIL 166

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            NA E    R  LL+A++          AS     E+LK  D  +  +  A     +Q  
Sbjct: 167 ANASEEQNQRIFLLLAQAAIQQPGLAEKASSQVHKEALKYKD--LPEAAIADVIFSAQGG 224

Query: 276 KRK 278
           K+K
Sbjct: 225 KKK 227



 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 88/256 (34%), Gaps = 22/256 (8%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L+        + Y  A + L  ++      + AV+    E+ + G+  +A   A +A  +
Sbjct: 350 LIGAMAYADVKDYPKAKQWLAKVVSPSYVFDKAVFGASLEAEQ-GNGKAALAEARRAQSL 408

Query: 184 SPDAP-------WVTEAVVQQYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARS 233
            P+          +    +           A++ LN+   K     +       +L  R+
Sbjct: 409 -PEQEGRYFGSKELQRVTLFALSKHDNLQEALSELNKMLPKISRQPDAMEQLPDVLYQRA 467

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKV 289
           +     GD   +  D    ++L  ++  A+   A   I  +  +K    A  +++  +++
Sbjct: 468 MIYDRMGDQGKAIADLRRVVELAPDN--ANGLNALGYILLSPTKKNLDEAFKLIQAAYQI 525

Query: 290 NP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            P +P I +   + + L ++    L       E   +  E    + +     G  ++A  
Sbjct: 526 EPENPAINDSLGWAYFLKDDVQTALPYLQYAFEKYPD-AEVAAHLGEALWASGEQEKAKK 584

Query: 347 KAMLAMKIAPRKEIFL 362
                +K     +I  
Sbjct: 585 IWTDGLKGEGDMKILR 600


>gi|222149840|ref|YP_002550797.1| TPR repeat protein [Agrobacterium vitis S4]
 gi|221736822|gb|ACM37785.1| TPR repeat protein [Agrobacterium vitis S4]
          Length = 1677

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 4/132 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                   +   A    E  LQ+   +   + ++      +GD   A     +A+ +   
Sbjct: 43  ALALHLSGRSREAIPAFEHALQLAPDQSGLLQNMVLPLIAVGDHQRAIDIGARAVTLDGK 102

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           A      +V     AK W  A+       +     + N   LL    +   + GD   + 
Sbjct: 103 AVGAWSNLVLALTSAKRWDEAL----NAARQGLALDNNEPSLLAQMGVILLELGDSAGAE 158

Query: 247 HDAIESLKLCDN 258
                +L+L  +
Sbjct: 159 THLRRALELKPD 170



 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 88/295 (29%), Gaps = 56/295 (18%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
                    +E    L E       R Y  A +    +L     RE  +  L       G
Sbjct: 567 AGRATDDAPDEAADGLNEAIKRHQGRDYGRAVQLYRHVLTQDFQRERVLNLLGMACLEAG 626

Query: 169 DLNS-----AQRYATKALDISPDAP--WVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKE 220
           + +S     A  +  +A+ I P     W   A+ +    L  +  RA+       ++   
Sbjct: 627 ERSSVAGRQAIPFCARAVAIRPSLGDHWSNFAIALDAAGLVTDGMRAL-------RHGLL 679

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           ++   A  L+A +      GD   ++  A E LK    S  A    A + ++  +   AE
Sbjct: 680 YDTGHAACLLALARRETSVGDAETAFRRAGEVLKAQPRSGHALSVYAAAALALGRFNVAE 739

Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGK------------------------- 310
             L +  ++ P     H ++  +           +                         
Sbjct: 740 EALRRACRIEPELASHHVQLGAVLLKAKQPQAAARAWEKALTLDPGNADAWSNLGVAERN 799

Query: 311 ---------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    ++R   L +      ES   +    ++ G  D+A      A++  P
Sbjct: 800 HGYADLACWIQRQGALAK--PGHAESWSNLGISLMDTGREDEAILAFGKAIEARP 852


>gi|194222021|ref|XP_001494093.2| PREDICTED: similar to transmembrane and tetratricopeptide repeat
           containing 4 [Equus caballus]
          Length = 1073

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 8/123 (6%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            ++  + + +W                     A +        ADKG+  A+     E++
Sbjct: 786 TLRCMIRSGDWRSEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAVRYYREAV 841

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR
Sbjct: 842 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 897

Query: 314 ALR 316
              
Sbjct: 898 FEA 900


>gi|256074639|ref|XP_002573631.1| cell division cycle [Schistosoma mansoni]
 gi|238658815|emb|CAZ29863.1| cell division cycle, putative [Schistosoma mansoni]
          Length = 787

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 72/250 (28%), Gaps = 19/250 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             +  +    Y  AH+      +I   +   +        ++       + A   L +  
Sbjct: 384 AARAHMDNSDYQTAHKLFNEARRIEPWQLSGMDFYSTVLWQVQADQELSQLAHDLLQLDR 443

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +AP           L  E   AI F  +  + +       A  L+       ++ D   +
Sbjct: 444 NAPEPWCVAGNCLSLQGEHEAAIKFFRRALQVSPT--SAYAWTLLGHEQSTLEEFD--RA 499

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
                 +L++      A    +     Q K   AE  L +   + P     +        
Sbjct: 500 LAAFQFALRIDPRHYNALFGISNVYYKQEKFDLAENYLVRAVALFPQ----SHLLLTHLA 555

Query: 306 NTVGKLKRA-----------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               +L R             R  +I   +  +    + I   +G   +  ++    + +
Sbjct: 556 ALRSRLGRLDDGYGSAMDLISRACKIQPNNPLARYHKASILYHLGRYSEVLSELQKLLVL 615

Query: 355 APRKEIFLLL 364
            PR+ +  L+
Sbjct: 616 TPREAMVYLM 625


>gi|170079336|ref|YP_001735974.1| receptor ligand binding family protein [Synechococcus sp. PCC 7002]
 gi|169887005|gb|ACB00719.1| receptor ligand binding family protein [Synechococcus sp. PCC 7002]
          Length = 466

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 47/175 (26%), Gaps = 39/175 (22%)

Query: 45  LSILYFFLFAWILL----FAVSRF--FLSCPAM----LFHMLHKRNYDKGYKAL------ 88
            ++L   +    LL    +   +    L  P      +          +G + L      
Sbjct: 8   AALLGALVITLGLLGAGGWWFLQQNQSLQLPTSLGDVIGQGETANRLSRGERLLLQGDRQ 67

Query: 89  ---YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV----QIAL---------- 131
                G+ +    + P A ++     Q      E L+YL       Q A           
Sbjct: 68  PDKEQGIAAYGTGDFPEAIRLFQASLQASPNDPETLIYLNNAKIRQQTANPQAIAVVVSL 127

Query: 132 -AERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDL----NSAQRYATKA 180
             +   + A E L  + Q            L   +   GD       AQ  A +A
Sbjct: 128 PVDTDTSGAKEILRGVAQAQKEALDGGRGFLVVLADDDGDPAIAAEVAQALADQA 182


>gi|156740399|ref|YP_001430528.1| TPR repeat-containing serine/threonine protein kinase [Roseiflexus
           castenholzii DSM 13941]
 gi|156231727|gb|ABU56510.1| serine/threonine protein kinase with TPR repeats [Roseiflexus
           castenholzii DSM 13941]
          Length = 545

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 25/238 (10%)

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
             +  P         R+  + +K    GL  +       A +       +          
Sbjct: 309 ALVGSPFPRESAFDDRDEAEHWK--ERGLAHMNMGEYKEAIRCFKRTV-ELDQDQPDGWN 365

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGD-------LNSAQR 175
           L+          +       E + + +  T    +Y         GD          A  
Sbjct: 366 LIARCSLQLWLYHEALQAVDEGLRRAVSRTEFAHLYG------ARGDIFATMQKPVDALA 419

Query: 176 YATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
              KAL  +P AP  W ++ V+ Q +   E ++A  +L +  +     + + A+      
Sbjct: 420 AFDKALSYTPTAPALWRSKGVLLQRL--GEMAQAQEYLEKAIQ----LDPSDAVARRLLG 473

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 G   ++ +   E+LKL   S+   +     L+   +  +A+   EK  +++P
Sbjct: 474 DVLCASGRHKSAANSYAEALKLDPRSVDGWVRYGNCLLHLARLEEAKHAFEKALQIDP 531


>gi|108757730|ref|YP_632805.1| TPR domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108461610|gb|ABF86795.1| TPR domain protein [Myxococcus xanthus DK 1622]
          Length = 624

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 7/234 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L+ ++      +  A + L + L         +  L  E  R+GDL  A+R   +A+
Sbjct: 57  TNYLQSRLKHHAGDHRGAVDALRLALATDDGNPLLLTRLGEEYARLGDLTRAERELRRAV 116

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
             +P        + +    +K ++RA   L +             +L       + + G 
Sbjct: 117 LRAPAYYPAHVLLGRVLTESKRFARARLHLRRAVTLKPREPEAYLVLTQL----HLEMGA 172

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +                       +L  +    +AE +L +     P          
Sbjct: 173 PDEAVKVVDALALALPGEASGYQRLGLALAERGDTARAERLLVEAATRAPGDVDVLTALA 232

Query: 302 LLSENTVGKLKRALRLEEI---NKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            L E+T   ++    L      + +S E L+   + AL+ GS  +A A     +
Sbjct: 233 QLYEDTGRPVQAEESLARALERDPDSREVLLGAGRAALKAGSAVRARAYFDRLL 286



 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 98/324 (30%), Gaps = 40/324 (12%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY-- 161
           +   S         +   V L   + AL       A    + +L + +  E  V   +  
Sbjct: 243 QAEESLARALERDPDSREVLLGAGRAALKAGSAVRARAYFDRLLSLSSEPEMPVRVAFSY 302

Query: 162 ------------FESCRIGDLNSAQ--RYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                        E+ R GD    +   YA    +         EA       A  ++ A
Sbjct: 303 LAAREPRAAAEVLEAARRGDHADPRLAYYAGLVHERMRRFADAAEAFAGVPAEADVYADA 362

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLE---------------NADKGDMIASYHDAIES 252
              L + +  +     +RA+ L   +++                   G    +     E 
Sbjct: 363 R--LRRARSLSLLGEHSRALTLFRAAMQESPADVEVRMQFARALERGGTPNRAELLLREG 420

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTV 308
           L    ++ +    AA     Q + R+A  +L       P  +   +Y     H    +  
Sbjct: 421 LSAGPSAALYDALAATLH-RQGRGREALTLLRGAVARFP-RDEDLLYVLGAAHERQGDVT 478

Query: 309 GKLKRALRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
           G L R   +  ++ +   +L  +   +A    ++D+A  +   A+++ P    +L     
Sbjct: 479 GALARMRAVLAVSPDHAAALNFLGYLLAQAGQNLDEAERRVRRALELRPDTGAYLDSLGW 538

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
                 +  + +   + A    PD
Sbjct: 539 VYFRRGDYARAVDALERASTLAPD 562



 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 93/326 (28%), Gaps = 42/326 (12%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           AR              E   YL+  Q+ L     + A + ++ +             L  
Sbjct: 140 ARARLHLRRAVTLKPREPEAYLVLTQLHLEMGAPDEAVKVVDALALALPGEASGYQRLGL 199

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                GD   A+R   +A   +P    V  A+ Q Y       +A   L +  +   +  
Sbjct: 200 ALAERGDTARAERLLVEAATRAPGDVDVLTALAQLYEDTGRPVQAEESLARALERDPD-- 257

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               +L   R+   A       +Y D + SL          +  A S ++  + R A  +
Sbjct: 258 SREVLLGAGRAALKAGSAVRARAYFDRLLSLSSEPEMP---VRVAFSYLAAREPRAAAEV 314

Query: 283 LEKIWKVNPH------------------PEIANIYTHLLSEN---TVGKLKRALRLEEIN 321
           LE   + +                     + A  +  + +E       +L+RA  L  + 
Sbjct: 315 LEAARRGDHADPRLAYYAGLVHERMRRFADAAEAFAGVPAEADVYADARLRRARSLSLLG 374

Query: 322 ----------------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                              VE  +  ++     G+ ++A       +   P   ++  LA
Sbjct: 375 EHSRALTLFRAAMQESPADVEVRMQFARALERGGTPNRAELLLREGLSAGPSAALYDALA 434

Query: 366 QIEQANSHNTDKILYWTQSALHAMPD 391
                     + +     +      D
Sbjct: 435 ATLHRQGRGREALTLLRGAVARFPRD 460


>gi|288963193|ref|YP_003453472.1| TPR repeat-containing protein [Azospirillum sp. B510]
 gi|288915445|dbj|BAI76928.1| TPR repeat-containing protein [Azospirillum sp. B510]
          Length = 866

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 7/226 (3%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             Q   A  +    L   +    A+  L   +  +G    A  +A +A+ + PD      
Sbjct: 17  SGQAAEAERQYRGFLSRGSFSTDAMVPLAELARCLGLTAEALAWAGRAVRLRPDQADAWT 76

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                 +           + +    A       A  L A ++       +  +     E+
Sbjct: 77  LYALALIAQHRVEAGTAAVGRALMIAP----RSAPALRAAAVAMLRMNRLPEAAARCGEA 132

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVG 309
           L +      A    A   +++ +  +A+V+  +   +   P  A   +            
Sbjct: 133 LAIQPGYADALATLALIRMAEGRAEEADVLFRQATALPMAPAEAFGNHAALLARLGRDAE 192

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            L+RA R   +      +  ++  +  + G  D A      A+   
Sbjct: 193 ALERAERAVALRPRLASAHHLLGTLHRQAGRTDPASRHFKAAIAAD 238


>gi|89056160|ref|YP_511611.1| transcriptional regulatory protein-like [Jannaschia sp. CCS1]
 gi|88865709|gb|ABD56586.1| transcriptional regulatory protein-like protein [Jannaschia sp.
           CCS1]
          Length = 527

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 13/156 (8%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +   + A   A +A+D  P +             A  +  A+   ++      
Sbjct: 358 LAICKLSLRRYDVALADAQRAIDADPASAMAHGCHAWVLAYAGRYRDALAAYDRAVALGG 417

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK---- 275
             +  R + +  R       GD   +   A E + L  ++         +L S  +    
Sbjct: 418 PSDPRRVLWMTGRETAQFGLGDYEGALDTARELIALSPDNPSGYRVKCAALASLGRLVEA 477

Query: 276 KRKAEVI--------LEKIWKVNP-HPEIANIYTHL 302
           +R A  +        ++      P  PE+A+ Y   
Sbjct: 478 RRAAAKLVALLPGHDVDTAIARQPFQPELASEYAAA 513



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 75/261 (28%), Gaps = 49/261 (18%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATR------EFAVYSLYFESCRIGDLNSAQRYATK 179
             Q  L + ++  A +        P  R          Y     +       +A+ +  +
Sbjct: 248 TAQPELIKAEHQKAEKT------DPEARSAWQEFVLGQY--LLAAPDKPANAAARAHFER 299

Query: 180 ALDISPDAP-----------------WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           A+ + P +                  W   A +     A++  RA+T          +  
Sbjct: 300 AMSLEPGSGRIHAGLAMTHLWDYWYDWSQNAGISLETAARDAERALTL------APDDSW 353

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               + +   SL   D      +  DA  ++     S MA  C A  L    + R A   
Sbjct: 354 AWSILAICKLSLRRYD-----VALADAQRAIDADPASAMAHGCHAWVLAYAGRYRDALAA 408

Query: 283 LEKIWK----VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            ++        +P   +             +  G L  A  L  ++ ++     +     
Sbjct: 409 YDRAVALGGPSDPRRVLWMTGRETAQFGLGDYEGALDTARELIALSPDNPSGYRVKCAAL 468

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
             +G + +A   A   + + P
Sbjct: 469 ASLGRLVEARRAAAKLVALLP 489


>gi|83647331|ref|YP_435766.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83635374|gb|ABC31341.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 1131

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 82/265 (30%), Gaps = 37/265 (13%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            ++A +      D  P       A++      +E    +  L   ++        +A+L 
Sbjct: 237 PDAALQTLRAGADDEPSIKLARAAILLTSGQQQEAGSLLESLQNDQRLGHLALAMKAVLA 296

Query: 230 I--------------ARSLENADKGDMIASYHDAIESLKLCDNSI----------MASIC 265
                          A +L NAD    + +   A ++      +I            ++ 
Sbjct: 297 AVNSQSQQALQLAQDAVAL-NADSPSALLALSYAWQANINLPEAIAAAERATVAAPHNVI 355

Query: 266 A----AKSLISQNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLE 318
                A+  ++      A+    +  ++ P HP+  IA  +  L             R  
Sbjct: 356 VWTRLAELQLTSGAYSNAKYAASRATEIAPTHPQAQIAEGFIALFEHKLADADAHFQRAI 415

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSHNT 375
           + +    ++ + +    L  G ++       +A+ ++P       +L  A  E+  S + 
Sbjct: 416 KADPGVPDAWLGLGLTKLRGGDLEAGRNNLEVAVSLSPNNAVLRSYLGRAYFEEKRSDDA 475

Query: 376 DKILYWTQSALHAMPDPLWISDDGY 400
            +   W  +      DP     DG 
Sbjct: 476 GE--QWLLAKERDSKDPTPYFYDGV 498


>gi|28199111|ref|NP_779425.1| hypothetical protein PD1224 [Xylella fastidiosa Temecula1]
 gi|28057209|gb|AAO29074.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 698

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 65/214 (30%), Gaps = 20/214 (9%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA---------------LA 132
           L     + A      A++  +   QQ+  H   L                        LA
Sbjct: 28  LARAWCASAPGEAQ-AQRWLAAALQQYGEHKAALTASEAALALAPELPELHLQHGLLLLA 86

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +   + A   L    ++   +          +   G L+ A++ +  A  I  D P +  
Sbjct: 87  QHDLSGADAALSRSTRLDPNQFNTYVMQAHLAIARGALDEAEQLSRTAARIISDHPQLLA 146

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                 +   +  +A+  L+Q  +   E       +L +       KG +  +       
Sbjct: 147 VNATITLHRGQVDQALAMLSQAVELLPE----EPAVLFSLGFAYLQKGHIAFAERAFQRV 202

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           ++L  + I      A+    Q +   A  ILE+ 
Sbjct: 203 IELNPHVIPVRALIAQLAQRQGRLDDALRILEEA 236



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 101/301 (33%), Gaps = 34/301 (11%)

Query: 92  LMSIAA----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L+++ A    H   + + +            E  V        L +     A    + ++
Sbjct: 144 LLAVNATITLHRGQVDQALAMLSQAVELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVI 203

Query: 148 QIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWS 205
           ++       V +L  + + R G L+ A R   +AL +   D P +     +  ++A    
Sbjct: 204 ELNP-HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELMAGNPD 262

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           RA+  L Q      E  R    LL A    + D  D   +   A++  K   +       
Sbjct: 263 RALPHLRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKKRNHDL-----W 316

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KE 323
            A+  ++     +A +++E+             +   + E+          L  ++  + 
Sbjct: 317 LARLSVAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQN 359

Query: 324 SVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
           + E+   V++  +A+E G +          ++  P   +  L   IE    H    +  W
Sbjct: 360 NPEAAETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVACLQQLIESVPEHERTILRPW 419

Query: 382 T 382
            
Sbjct: 420 L 420


>gi|85107807|ref|XP_962452.1| hypothetical protein NCU11379 [Neurospora crassa OR74A]
 gi|28924058|gb|EAA33216.1| hypothetical protein NCU11379 [Neurospora crassa OR74A]
          Length = 734

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 38/220 (17%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + ++ A +  +  +   P +++     L     +I D     +     L   P       
Sbjct: 91  KNFDEAIKAYKFALKLEPESQQI-QRDLAVLQVQIRDYQGYVQSRFAMLKAKPHLRQNWT 149

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMIASYHD 248
           A+   Y L     +A   L   +K+        ++  +  L+ ++   A++GD+  +   
Sbjct: 150 ALAIAYQLEGSLEQAENILTTYEKSMTNVPLKTDQEHSEALLYKNTIIAERGDIKRALEH 209

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
                K C + +      A+ L   N+K +A       W+                    
Sbjct: 210 LESDCKNCLDRLAVMEMRARYLGQLNRKEEAAK----AWRA------------------- 246

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                   L + N E  E    + + ALE+   D+A  KA
Sbjct: 247 --------LLDRNPEHPEYYKGLIE-ALEIDEKDEAALKA 277


>gi|326915587|ref|XP_003204096.1| PREDICTED: tetratricopeptide repeat protein 13-like [Meleagris
           gallopavo]
          Length = 685

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 34/188 (18%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A  +   MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 73  NGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEPDH 132

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKK-----------------------------KNA 218
           P V E   +        S A++ L +                               +++
Sbjct: 133 PEVFEQRAEILSPLGRISEALSDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQHS 192

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E N+N+ I ++ + L    +G +  +     E+LK   + I A     ++         
Sbjct: 193 LELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFDA 252

Query: 279 AEVILEKI 286
           A    +K 
Sbjct: 253 ATESFQKA 260


>gi|322787461|gb|EFZ13549.1| hypothetical protein SINV_08719 [Solenopsis invicta]
          Length = 847

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 27/240 (11%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  P+   
Sbjct: 441 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 496

Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  ++Q+   A+    A   L +  +  K+ N  R    +   +   D  D  ++ 
Sbjct: 497 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 552

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299
                ++ L ++   A    A  L  + +  +A   L +   V  HP+       + +IY
Sbjct: 553 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 610

Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             ++   +      R  R+ +++  +++ L  +  + +E G +  A      A  +AP +
Sbjct: 611 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLERAAALAPHQ 668


>gi|156549360|ref|XP_001601753.1| PREDICTED: similar to GA17918-PA [Nasonia vitripennis]
          Length = 1015

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 88/240 (36%), Gaps = 27/240 (11%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  P+   
Sbjct: 576 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 631

Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  ++Q+   A+    A   L +  +  K+ N  R    +   +   D  D  ++ 
Sbjct: 632 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSESAE 687

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299
                ++ L ++   A    A  L  + +  +A   L +   V  HP+       + +IY
Sbjct: 688 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 745

Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             ++   +      R  R+ +++  +++ L  +  + +E G +  A      A  +AP++
Sbjct: 746 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLERAAALAPQQ 803


>gi|194366102|ref|YP_002028712.1| tetratricopeptide repeat-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194348906|gb|ACF52029.1| Tetratricopeptide TPR_2 repeat protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 306

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +  + +   + LL+        Q + A      +   P       + L   + R  D   
Sbjct: 71  RQRYGDPPALRLLQADALRETGQADAAIALYRELSSGPQAAAA-AHGLGLIAARRDDDAG 129

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           +++   +A  + P        +    + A  + +A   L +  + +    +  A L    
Sbjct: 130 SEQALAQATQLQPLNTSYLGDLGYARLRAGRFEQAREPLAKALELSPGNAKATANL---- 185

Query: 233 SLENADKGDMIASYHDAIESL 253
           +L    +GD   +   A ++ 
Sbjct: 186 ALWAVLRGDTATAERLAQQAN 206


>gi|46202374|ref|ZP_00053308.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 1207

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 14/207 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R GD  +A     + + + P       A  Q   LA     ++ F      +  E +R
Sbjct: 31  ARRYGDTETALSAYRRIIALDPINTEAPLAAAQTCRLAGRPRDSLLFC----LDLLEMDR 86

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 +  +      G    ++      L    +S+      A+ L  + +   AE+ L
Sbjct: 87  QHMGCRLELAEALRQIGQPEEAHAIIDILLMERPDSVQVWCGLAQLLCDEGRLAGAELSL 146

Query: 284 EKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +   +  HP     +  L         +   L        +  + V   V +++  +++
Sbjct: 147 RRALGL--HPGFGPAWATLGGVLARMGESDAALDAFHAAIILEPDQVSHQVHLAEALMDL 204

Query: 339 GSIDQAHAKAMLAM---KIAPRKEIFL 362
             ID+A A    A+   +  P   +  
Sbjct: 205 NRIDEAAAHIGRALALDEEDPSARLAR 231



 Score = 39.9 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 65/224 (29%), Gaps = 21/224 (9%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++    +   A   +  +      + E    L   Q      +   +      +L++   
Sbjct: 30  LARRYGDTETALSAYRRIIALDPINTEA--PLAAAQTCRLAGRPRDSLLFCLDLLEMDR- 86

Query: 153 REFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           +         E+ R  G    A       L   PD+  V   + Q        + A   L
Sbjct: 87  QHMGCRLELAEALRQIGQPEEAHAIIDILLMERPDSVQVWCGLAQLLCDEGRLAGAELSL 146

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +       +    A L        A  G+  A+      ++ L  + +   +  A++L+
Sbjct: 147 RRALGLHPGFGPAWATL----GGVLARMGESDAALDAFHAAIILEPDQVSHQVHLAEALM 202

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             N+  +A   + +                L  E+   +L RA 
Sbjct: 203 DLNRIDEAAAHIGRA-------------LALDEEDPSARLARAR 233


>gi|326433511|gb|EGD79081.1| hypothetical protein PTSG_02049 [Salpingoeca sp. ATCC 50818]
          Length = 759

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 30/148 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLL-------------EVQIALAERQYNIAHEKLE 144
            +   AR       + H+   E  +++L               Q   ++  Y  A E L 
Sbjct: 351 GDTMRARGAQEGAIKYHSKALEIRLHVLGEDHDDTRESRRDVAQAYESKGDYTTALEHLN 410

Query: 145 MMLQIPATREFAVYSLYFESC---------RIGDLNSAQRYATKALDI--------SPDA 187
             L++   +E+  Y     +          R    + A RYA KAL++         P++
Sbjct: 411 KALEVMEGKEYGPYDTTLAAVYNQLGRVYARTKQNDEAIRYAEKALEMFEKAYGEDHPES 470

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                 + Q Y    + +RAI +L++  
Sbjct: 471 ASSINVLAQVYQNKGDTTRAIEYLHRAL 498


>gi|313899639|ref|ZP_07833145.1| tetratricopeptide repeat protein [Clostridium sp. HGF2]
 gi|312955560|gb|EFR37222.1| tetratricopeptide repeat protein [Clostridium sp. HGF2]
          Length = 504

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 33/215 (15%)

Query: 154 EFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                  SL          N+A  Y  KAL    D  W+ + ++      ++W++ + +L
Sbjct: 244 LLGDVYRSLQRIRESDEQYNTALEYFEKALQKETDIYWIYQEMIWIAHKQQDWTKKLQYL 303

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIAS-------YHDAIESLKLCDNSIMASI 264
            +  +  K+       L+   +   +D  D + +            E  ++ D       
Sbjct: 304 ERASEEKKD----DLWLMFHYARCYSDLHDHVKAIAACEFCLQHGEEGREMQD------- 352

Query: 265 CAAKSLISQNKKRKAEVILEK--------IWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
             A +L   ++  KA  +L+K         W  +   E+   YT L  E+    ++   +
Sbjct: 353 LYAWNLGRSSQGEKAIAVLKKRIERFGGEAWNFS---ELGWNYTQL--EDYKEAIRCFKK 407

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             ++  ++  +  ++    L +  +D A +  + A
Sbjct: 408 AYDLEPKNPLNCSMLGWCNLRLNQLDAALSFLLEA 442


>gi|168704383|ref|ZP_02736660.1| serine/threonine-protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 1008

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 65/229 (28%), Gaps = 35/229 (15%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L  R+ + A + L   ++       A   L        D   A R   ++L ++P  P
Sbjct: 787 ALLRTRELDAAVQSLRAAVECDPRSAVAHAELGRALQLKRDTTGAIRAYRESLKLNPANP 846

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A+       ++   AI       + A         L     +     GD   +   
Sbjct: 847 GAASALGHLLWDREDLDGAIGAFRDALRYAPA----EPGLHNNLGMLLRQTGDPRGAASA 902

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             E+++L    +       ++  +     +A                          +  
Sbjct: 903 YKEAIRLDPKHL-------RARYNLGVALRAAK------------------------DPA 931

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           G +K    L  ++         +     ++G +D A A+   A+ I P 
Sbjct: 932 GAVKAYRELLALDPNHSAGHNGLGNALRDLGDLDGAIAEFRAALSINPS 980



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 2/106 (1%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++     +   A   +    +    H      L       A +    A +    +L + 
Sbjct: 887 GMLLRQTGDPRGAASAYKEAIRLDPKHLRARYNL--GVALRAAKDPAGAVKAYRELLALD 944

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
                    L      +GDL+ A      AL I+P      + +  
Sbjct: 945 PNHSAGHNGLGNALRDLGDLDGAIAEFRAALSINPSNGPAQQNLTD 990


>gi|110679389|ref|YP_682396.1| TPR domain-containing protein [Roseobacter denitrificans OCh 114]
 gi|109455505|gb|ABG31710.1| TPR domain protein [Roseobacter denitrificans OCh 114]
          Length = 285

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 53/150 (35%), Gaps = 9/150 (6%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           LE  +A A +++  A    E  + +  T   A  +  +     GD + A++   +A+   
Sbjct: 145 LEAMMADANKEWRKADSFYETAIGLTTTPAGAFNNWGYSKLTRGDFSGAEKLFGQAIRQD 204

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P        +V      ++++                   RA LL   +L    +GD+  
Sbjct: 205 PTLFTAKNNLVLARSAQRKYT---------LPVVPMTQSERAQLLHTMALSAVRQGDIQT 255

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQN 274
           S     +++        A++ A ++L    
Sbjct: 256 SKSLLRDAIDTHPQHFDAAVRALEALERSG 285



 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 68/239 (28%), Gaps = 13/239 (5%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             N A    +  L+    R      L     R      A     K  ++       +   
Sbjct: 54  DPNEAISYYQRTLKSDPDRLDLRRGLATSFVRAKRFTEAASAWEKVTELKDSTHEDSVNY 113

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               + + +W  A   L+      + + R R   ++A + +   K D        +    
Sbjct: 114 ADALIRSGDWDTAEKVLDTVPPTYETFKRYRLEAMMADANKEWRKADSFYETAIGL---- 169

Query: 255 LCDNSIMASICAAKSLIS--QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
               +  A            +     AE +  +  + +P   +     +L+   +  +  
Sbjct: 170 ---TTTPAGAFNNWGYSKLTRGDFSGAEKLFGQAIRQDPT--LFTAKNNLVLARSAQRKY 224

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQ 369
               +     E  + L  ++  A+  G I  + +    A+   P+        L  +E+
Sbjct: 225 TLPVVPMTQSERAQLLHTMALSAVRQGDIQTSKSLLRDAIDTHPQHFDAAVRALEALER 283


>gi|121998981|ref|YP_001003768.1| peptidase M48, Ste24p [Halorhodospira halophila SL1]
 gi|121590386|gb|ABM62966.1| peptidase M48, Ste24p [Halorhodospira halophila SL1]
          Length = 486

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 61/165 (36%), Gaps = 8/165 (4%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              + ++A+  LN            R  +L+ R       GD   +     E+  L   S
Sbjct: 326 EEGQHAQALALLN----TLSAIEGERLYVLLGRGEILRAIGDTEEALATYREARSLYPGS 381

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEIANIYTHLLSENTVGKLKRALRLE 318
             A+   A++L++ +  ++A  +L +  +  +  P++  +     +     + +  + L 
Sbjct: 382 WAATYRLAETLLADDDAKEARRVLARATRGSSGSPQLLRLLADA-AHAAGREAEGYIALA 440

Query: 319 EINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           E  +   E  + V+++  A+     D+       A+K    +   
Sbjct: 441 EHYRGRGEHRLAVAQLNNAIRHAGEDRYQRARAEALKARWTQHAA 485


>gi|332242055|ref|XP_003270199.1| PREDICTED: transmembrane and TPR repeat-containing protein 4
           isoform 2 [Nomascus leucogenys]
          Length = 630

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 8/123 (6%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +++  V + EW                     A +        ADKG+  A+     E++
Sbjct: 343 MLRCVVRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 398

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR
Sbjct: 399 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 454

Query: 314 ALR 316
              
Sbjct: 455 FEA 457


>gi|332305582|ref|YP_004433433.1| type IV pilus biogenesis/stability protein PilW [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172911|gb|AEE22165.1| type IV pilus biogenesis/stability protein PilW [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 329

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 19/200 (9%)

Query: 190 VTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             +  +     Y+    +S+A   L++    A       A +    +    +  +  ++ 
Sbjct: 35  AAKTRLSLGLTYLENGNYSQAKFNLDKALAFAPNL----ADVHYGMAYYYQNVEEPESAS 90

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
               +++ L   +   +      L +Q    +A+    K    + +   A  Y +L    
Sbjct: 91  KAYQKAISLAPKNADIANSYGAFLCAQGDYEQAKEYFFKALNSDVYNSSAETYENLALCS 150

Query: 305 ------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357
                 ++ +G LK A           +SL +++++ L+      A        K+A   
Sbjct: 151 QSQNAFDDAIGFLKDA---LNHQPGRAKSLFLLAQVQLQANRFAAARDSLRRYEKVASVS 207

Query: 358 KEIFLLLAQIEQANSHNTDK 377
            +   L  +IEQ        
Sbjct: 208 AQSLWLAVKIEQGAGAPKRA 227


>gi|319785717|ref|YP_004145192.1| HemY domain protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317464229|gb|ADV25961.1| HemY domain protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 418

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 113/353 (32%), Gaps = 19/353 (5%)

Query: 20  IVSHY----PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHM 75
            ++         V +  G   Y  S  V +++L   +    +L+ + R            
Sbjct: 23  WMAQQDPAQMGRVIVRTGGYDYSASLPVAIALLLAAMVLLAILWHLLRLPF-------RA 75

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
             +    +G   L  G+ ++         ++    +         L     V+ A A   
Sbjct: 76  WGRYRKRQGRGRLIEGMRAVYGGRWSQGERLLGTAADDAEAGTLALAG--AVRAADARGD 133

Query: 136 YNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
              A + L  +  + P               R  D  +A   A  A  + P    +    
Sbjct: 134 EAAAEQWLAQLGSRDPVLHAVLKAERLLAHGRPVDAINALDVAE-AQPLPPRGLLLRARA 192

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           +     A E    +  L Q+     +      I L A SL+  D  +++A      E++ 
Sbjct: 193 LAAVHRAGEAYGLLGALRQQGALPPDGLAALEIELAAASLQETDDANLLAER---WEAMP 249

Query: 255 LCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
               +  A I A A+   +      A   LE+   V+   E+ ++Y  L   +   +   
Sbjct: 250 KPLRTEPAVIGAYARRASALGWHDAAMRHLEQALDVHWDEELVDLYARLPVGHVDSRRAS 309

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           A R  + +  S   LV ++++A       QA      A++     + + LL  
Sbjct: 310 AQRWLQQHPHSPALLVALARLARGQEQWPQARDFLHRALEEGAGADAWELLGD 362


>gi|261400184|ref|ZP_05986309.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970]
 gi|269210184|gb|EEZ76639.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970]
          Length = 616

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 74  LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + +           +  L +    + +  + R  LL+A++   
Sbjct: 133 EPIPGGAQKRAGWLRNVLKEGGNQR------LDGLEEVLAQSDDVQKRRVFLLLAQAAVQ 186

Query: 237 ADKGDMIAS-----------------------------YHDAIESL----KLCDNSIMAS 263
            D     AS                                AI +L    KL    +  +
Sbjct: 187 QDGLAQKASEAVHRAALKYEHLPEAAVADVVFNVQVREKDKAIAALQRLAKLDTEILPPT 246

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRA 314
           +   + +      R+   IL   ++      ++ ++  +           ++   +LK  
Sbjct: 247 LVTLRLVA-----RRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLRRPDDAYERLK-- 299

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L + N  +     +  + A+   +  +  +     ++ A       ++    L A + 
Sbjct: 300 -VLLDANPNAD----LYIQAAILATNRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMM 354

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 355 YADRRDYAKVRQWLKK-VSAP 374


>gi|114777009|ref|ZP_01452029.1| hypothetical protein SPV1_06594 [Mariprofundus ferrooxydans PV-1]
 gi|114552530|gb|EAU54990.1| hypothetical protein SPV1_06594 [Mariprofundus ferrooxydans PV-1]
          Length = 562

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 69/199 (34%), Gaps = 8/199 (4%)

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            I P    V        V A +  +A     Q    A +       L      +     D
Sbjct: 43  AIQPGNADVANIRGIVCVQAGDKMQAEQLFVQAINAAPKRAEFHNNLGKLYLSQKLF-TD 101

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EI--ANI 298
               Y  A+   +   +     +    SL+   +  KA  ILE++    P+P ++  A  
Sbjct: 102 AAERYRSAMHYDRNSLDL---KLGYCASLVGMGEPEKALPILEQLRSKKPNPPDLFMALF 158

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357
           Y +         L    +L   + +  ++     ++ ++ G + +A  +   A+ + P  
Sbjct: 159 YAYQGLGRIDDALACLDKLIAGDADHFDARFQRGQLFMQQGRMQEAEDELHAALALRPDY 218

Query: 358 KEIFLLLAQIEQANSHNTD 376
            + + +L ++++  S +  
Sbjct: 219 SKAYSMLVEMKKFTSDDDA 237


>gi|303238712|ref|ZP_07325245.1| transcriptional regulator, AraC family [Acetivibrio cellulolyticus
           CD2]
 gi|302593831|gb|EFL63546.1| transcriptional regulator, AraC family [Acetivibrio cellulolyticus
           CD2]
          Length = 791

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 71/183 (38%), Gaps = 23/183 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEMM 146
           G+++    N   A KM +   +  +     E +   L    +++ +++ Y+ A +  E  
Sbjct: 443 GMVARGKGNFGQAMKMFNEHLKICEELDDKEGISNALINIAEMSRSQQNYSFARDYYERC 502

Query: 147 LQIPATREFAVYSLY--------FESCRIGDLNSAQRYATKALDI------SPDAPWVTE 192
           L++   RE    SL           +   GD + A +   ++L++      + +  W+  
Sbjct: 503 LKL--VREMGYKSLIARTLKDLGEIARYEGDFDKAGQLFQESLEVLEESKDNGEMMWLYR 560

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            + +  +  + +S A     +  +    +  +R I LI   L      ++  +  + I +
Sbjct: 561 NMAELEMQKQCYSSAKELYFKGLR---VFRGSRQITLIYALLVFEGLAEIAFAQEELIMA 617

Query: 253 LKL 255
            +L
Sbjct: 618 ARL 620


>gi|169829329|ref|YP_001699487.1| hypothetical protein Bsph_3881 [Lysinibacillus sphaericus C3-41]
 gi|168993817|gb|ACA41357.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 219

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A  +++Y  A +     ++          +       + D   A+R+  KA+ +   A  
Sbjct: 10  AFQDKRYEEAAQLFTKAIEAEPENAIGYVNFGNLLAVLEDTERAERFFQKAITVDETAAT 69

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y  A+ ++ A+    Q  K+  E     A +            +   +    
Sbjct: 70  AYYGLANLYYNAERYAEAVKLYEQALKHHIEG----ADVYYMMGKCFERMENSKLALPYL 125

Query: 250 IESLKLCDN-----SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLL 303
             ++++           A +  A  +  Q K ++ ++++E+ W   + H  +  +Y  + 
Sbjct: 126 QRAVEIAPEDTQIRLAYAIVLCALEMFEQGK-KELDLLIEQDWNNADAHYNLGVLYA-VS 183

Query: 304 SENTVGKLKRALRLEEINKESVESLVI 330
           +E T   +    +   +  E  ++  I
Sbjct: 184 TEQTEDAMYHLKQAFTLQPEYDQARYI 210


>gi|17229291|ref|NP_485839.1| hypothetical protein alr1799 [Nostoc sp. PCC 7120]
 gi|17130889|dbj|BAB73498.1| alr1799 [Nostoc sp. PCC 7120]
          Length = 402

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 4/158 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + +   A       L I   R  A Y+L       G L  A      A+++ P   
Sbjct: 160 ALQQQGKKEGAITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAVNLEPSKI 219

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +  K     +   A    +     A +G    +   
Sbjct: 220 NAHHNLAIALQQTGKMEEAIVAYREVLK----LDPKNAAAYSSLGSLMAMQGRPEEAIAA 275

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             ++++    + +A      +L +Q + +KA    ++ 
Sbjct: 276 YTQAVRQDPKNALAYYNLGITLYNQGELQKASNAFKRA 313


>gi|284052546|ref|ZP_06382756.1| glycosyl transferase family protein [Arthrospira platensis str.
           Paraca]
          Length = 238

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 12/206 (5%)

Query: 160 LYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           LY ++         + A      AL+  P+     + +     L  E+ +A     +  +
Sbjct: 12  LYQQANTYLAKQQFSEAIASCKTALEYHPNLAPAYKIIGTVEQLQGEFDQAEASYKKALE 71

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              ++    A L    + +N +    I+ Y  AIE   +  +   A    AK     N+ 
Sbjct: 72  IEPDFAEVYANLGSLFAQQN-EWQSAISFYEKAIE---IKPDFGGAYRNLAKVFGQINQP 127

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEEIN----KESVESLVIV 331
            KA   L K   + P       Y  +    +  GK  +A+ L            E    +
Sbjct: 128 NKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEIYPNVAEIHYNL 187

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
            +  +       A      A+++ P 
Sbjct: 188 GETFVNCQQWKSAITAYKQALEMNPD 213


>gi|283852059|ref|ZP_06369334.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283572609|gb|EFC20594.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 788

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 35/210 (16%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E+ R      A+   +KA+ +        E  VQ  +       A     +         
Sbjct: 46  EALRQ--PGPAEGAFSKAVALEKGLLEAWEGRVQSLLALGRCDEAAKDATRVLTRQP--G 101

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
               +L +  +   A  G    +      +L        A++  A+ L+ Q +  +A  +
Sbjct: 102 HVPMLLALGTARHQA--GRRDEAAEAYRRALAAAPGQPFATVSLAQILLEQGQAGQALAV 159

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----------------KESVE 326
           L+                     +    LKRA  L  +                  +   
Sbjct: 160 LDD-------------CPAGEQRDGRVALKRAEALWALARRDEARAVAEAAAARFPQDDA 206

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               + +   E G  + A A    A  +AP
Sbjct: 207 VRATLGRYCYEAGETEAAVAWLRQAAHLAP 236


>gi|156740598|ref|YP_001430727.1| hypothetical protein Rcas_0580 [Roseiflexus castenholzii DSM 13941]
 gi|156231926|gb|ABU56709.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 319

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 4/120 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+ D  +A+     A+   P            +    + + A+  L+   + +       
Sbjct: 180 RLNDRTAAREAFDAAIRARPQHVDALYERALLHYAVGDLNAALADLDTALRLSP----RA 235

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    AR L    +GD  ++  D  ++L L  +   A I  A +   Q     A   L++
Sbjct: 236 ANAYYARGLIRHTQGDPRSAIADFGQALLLRPDYPEALIARAATYAEQGNITAARADLKR 295


>gi|77747992|ref|NP_639573.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|77761345|ref|YP_245384.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 901

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           K  +R RA L   R L+   +     +     E+LKL  +  +A+         Q +  +
Sbjct: 780 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 839

Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A   LE   K++P        + + Y     +    + K       +  +   +    ++
Sbjct: 840 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 897

Query: 334 I 334
           +
Sbjct: 898 L 898


>gi|333025910|ref|ZP_08453974.1| hypothetical protein STTU_3414 [Streptomyces sp. Tu6071]
 gi|332745762|gb|EGJ76203.1| hypothetical protein STTU_3414 [Streptomyces sp. Tu6071]
          Length = 454

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 68/237 (28%), Gaps = 14/237 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            A        A   +   L     P    FA Y L   +   GD  +A   A   L  +P
Sbjct: 193 AAELRGDTTAARSAMRRALDAANGPDDTSFARYYLSELAFGSGDAETALSEAEAGLRATP 252

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            AP + +A  +          A   L++  +          +  +  SL    + +   +
Sbjct: 253 GAPSLLQARARARAALGRGQAATEDLSKAVQALPLPEYLVQLGELYDSLGQHREAERQFA 312

Query: 246 YHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              A +    +  +  +S      AA         R+A  +     +  P  +  +    
Sbjct: 313 VLRAEQRLFTANGVALDSD-----AALFEADHGDPRRALTLARAGLRGRPFLDSHDALAW 367

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAP 356
            L +N   +         +   +  +L    +  +   +G    A      A+   P
Sbjct: 368 ALHKNGRDREALTEADRALALGTRNALFTYHRAMILESLGDKAAARTGLRTALATNP 424


>gi|319643549|ref|ZP_07998170.1| hypothetical protein HMPREF9011_03771 [Bacteroides sp. 3_1_40A]
 gi|317384813|gb|EFV65771.1| hypothetical protein HMPREF9011_03771 [Bacteroides sp. 3_1_40A]
          Length = 246

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              LNQK    +++ +++NR           L AR+    +      +  D  E+ KL  
Sbjct: 140 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 199

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295
           +     +   +  +SQ KKR+A V  EK  ++  P PE+
Sbjct: 200 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 238


>gi|302692584|ref|XP_003035971.1| hypothetical protein SCHCODRAFT_84511 [Schizophyllum commune H4-8]
 gi|300109667|gb|EFJ01069.1| hypothetical protein SCHCODRAFT_84511 [Schizophyllum commune H4-8]
          Length = 289

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 14/230 (6%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            Y  A      +  +   R + +    SL +   +  +L+     A + L+I+P AP   
Sbjct: 11  NYAAAERAFGAVRTLEPYRLWDMEIYSSLLWNVRKAEELS---YLAQELLNINPHAPQGW 67

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A    + L ++ ++A+    +  +     + + A        E  D+ D   + +    
Sbjct: 68  LAAGNLFSLQRDRAKALACFRRAFQ----LDPSCAYAYTLSGQELLDE-DADRAINFFQS 122

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK- 310
           +L++      A        +  +K R AE    K  ++NP   +      +  E    + 
Sbjct: 123 ALRVDARHYNAWYGLGTCYMRMSKIRMAEFHFRKAVEINPKNAVLLGCLGMAVERRNDRP 182

Query: 311 --LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             LK      E+  ++       +KI + M   + A +        +P +
Sbjct: 183 GGLKLFNEAVELQPDNALVRYRRAKIYIAMRRYEDAISDLEFLRNTSPEE 232


>gi|284036394|ref|YP_003386324.1| hypothetical protein Slin_1475 [Spirosoma linguale DSM 74]
 gi|283815687|gb|ADB37525.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 467

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 3/87 (3%)

Query: 131 LAERQYNIAHEKLEMMLQIPATRE--FAVYSLYFES-CRIGDLNSAQRYATKALDISPDA 187
             E     +  + E ML    ++     VY    E     GDL+ A + A   L+  P A
Sbjct: 7   EREGDIKESIRRFEQMLDQQQSQFFDLDVYEQMVEHYLNQGDLDKALKAAESGLENFPYA 66

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +     Q     + +  ++  L + 
Sbjct: 67  LELMLDKAQIMANFQRFDESLDLLERA 93


>gi|219850611|ref|YP_002465044.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus
           aggregans DSM 9485]
 gi|219544870|gb|ACL26608.1| serine/threonine protein kinase with TPR repeats [Chloroflexus
           aggregans DSM 9485]
          Length = 863

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 50/385 (12%), Positives = 116/385 (30%), Gaps = 48/385 (12%)

Query: 39  TSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA-A 97
               V +  L   +   I LF + R     P  L               + TG  ++A A
Sbjct: 373 VGILVGVIALGLLIGGGIALFVLFRPSSPTPTSLTDTTAS--------FISTGDTALAHA 424

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE--- 154
             +  A + +      ++       +L      LA+  ++ A    + ++    +R    
Sbjct: 425 GGLTEAIEAYRKAVAANSDDMTAHAHL--AGALLAQGSWSEAIAVTDPLINATDSRAQAI 482

Query: 155 -FAVYSLY-------FESCRIG------DLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
              +            ++   G      D N A  +A  A  ++ DA    +  +     
Sbjct: 483 GLGIRGYAYLHLGNRVQARISGERAIKADDNEALGHALYAAVLATDAADSRDNDLMDRA- 541

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARS--LENADKGDMIASYHDAIESLKLCDN 258
                 AI     +   +   N+  A  L+  +   +   + D       A+ SL+   +
Sbjct: 542 ----FNAIGSAEDRLAASDPLNQALAHALLGWAFSRDFLLRDDPNT-LEQAVSSLEAAID 596

Query: 259 SIMASIC----AAKSLISQNKKRK-AEVILEKIWKVNPHPEIANI---YTHLLSENTVGK 310
                           ++ ++    A   L+    ++P    A     +     + T   
Sbjct: 597 RFPNLALFHYELGTIYLTTDQDSTLARDELQNALTLDPTFSAAQAALGWLAYRDDQTDAA 656

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIE- 368
            +   +  ++N +   +L  + ++A +  + +QA       +   P     +  L + + 
Sbjct: 657 KQAFQQALQLNPKEGLALFGLGRLAFDDENFEQALDYFQQTIDANPDFASAYAYLGETKL 716

Query: 369 --QANSHNTDKILYWTQSALHAMPD 391
                + + +    W   A  A  +
Sbjct: 717 FTGFQNADNETAGDWYSQAEEAYRE 741


>gi|83814353|ref|YP_445962.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83755747|gb|ABC43860.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
           13855]
          Length = 627

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 84/241 (34%), Gaps = 15/241 (6%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDIS 184
           Q   + ++Y  A   +E  +  P T    V  L  ++    + G+  +A     +AL ++
Sbjct: 86  QAYESLKRYRDALRLVEERIGSPPT----VSRLAEKARLQYQKGEGEAADATWDRALALA 141

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P+ P     V       +++ +AI  L + +    + +  R  L     L+    G   A
Sbjct: 142 PNEPQTYRTVYNTLAELRQFRKAIAVLQEGRAALDQPDAFRTELAHLYGLD----GQFEA 197

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE-VILEKIWKVNPHPE---IANIYT 300
           +  + +  L    N +       ++ + Q +   A   +L++  + NP  E       + 
Sbjct: 198 AMQEYVAFLAEAPNRLNYVRSRLRTFVEQGQGIAASIQVLQQTVQENPLNEAYRTLLAWL 257

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           H   ++          L+ +     + L   ++ A +      A        +  PR  +
Sbjct: 258 HTEQDDYAAAFDEYRALDRLGDRQGQILFGFARRAADAQRYGVATRACEAIQEQYPRSGV 317

Query: 361 F 361
            
Sbjct: 318 A 318


>gi|167570099|ref|ZP_02362973.1| TPR domain protein [Burkholderia oklahomensis C6786]
          Length = 322

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 6/138 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL      A  Q   +      +L  P         L   S   GD ++A +  T+
Sbjct: 83  PDTILLRADALRATDQAAASTVAYRQLLNTP-LAARGYRGLGLLSGASGDFDAASQALTQ 141

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++P        +    + + + + A   L +      E ++N   +L   +L     
Sbjct: 142 ATALAPTDSLTLSDLAYARMRSGDVAGARVPLMKA----AELDQNNPKILSNLALFLLAT 197

Query: 240 GDMIASYHDAIESLKLCD 257
           G    +    +  LKL  
Sbjct: 198 GQTRDALGL-MNQLKLAP 214


>gi|116626628|ref|YP_828784.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229790|gb|ABJ88499.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 271

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 53/203 (26%)

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS----------------- 269
           +   AR+     +     +     E+L+L  N + A    A+                  
Sbjct: 25  LAAYARADRMFREHRFQDAMDAVDEALRLNPNLVPALTLRARLAMAANRYDVARQSLERA 84

Query: 270 -----------------LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSEN 306
                               QN+   A   LEK   +N H   A +Y  L       ++ 
Sbjct: 85  IAADPQSWYARFLYGFHFYEQNEMPAAIAALEKARDLNAHDPPAALYLGLAYEAVGRADE 144

Query: 307 TVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
            +   +RA+ LEE +    VE+L+  S+++L +G  D A   A  A KI P         
Sbjct: 145 ALQLYRRAIELEEASGALHVETLLTASRLSLLLGRFDDAAGLAQRAAKIDPASR------ 198

Query: 366 QIEQANSHNTDKILYWTQSALHA 388
                   + +    W + A+ A
Sbjct: 199 ------DPHFELARVWLKKAVSA 215


>gi|206578353|ref|YP_002236097.1| outer membrane autotransporter barrel domain protein [Klebsiella
           pneumoniae 342]
 gi|206567411|gb|ACI09187.1| outer membrane autotransporter barrel domain protein [Klebsiella
           pneumoniae 342]
          Length = 1350

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 42/367 (11%), Positives = 98/367 (26%), Gaps = 79/367 (21%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           + +   +R      +A   G  ++ + N   A++    V Q +    + L  +    IA 
Sbjct: 261 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 315

Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176
               Y  A + L                   +   Y    ++    + G+++ A      
Sbjct: 316 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 375

Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                 A  A         L  + D P   + +        + +     L    +   + 
Sbjct: 376 LAQQSGARGASAKLFRADVLRHNKDLPQAEQTLRSLLSDDPQNAAGRENLYYVLREQNKS 435

Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258
              +A+L                          ++      G+   +     E +    +
Sbjct: 436 AEAQAMLQTLPQNLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPD 495

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
                +  A+ L       +A  ++   ++  P      +Y   L  +  G  ++A  L 
Sbjct: 496 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNNALYAAALFASENGAWQQAQTLL 553

Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359
                  ++               +  ++  L  G+   A           P+      +
Sbjct: 554 ARIPGGSQTSDMRDLRQRVNYNLQLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGK 613

Query: 360 IFLLLAQ 366
           +  LLA+
Sbjct: 614 LARLLAE 620



 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 91/277 (32%), Gaps = 29/277 (10%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188
                 A ++ E +LQ       A+  + + + R GD  +A +Y ++A D+  DA     
Sbjct: 283 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 342

Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               +A+    +   + +     ++Q    +    +       +  L  AD         
Sbjct: 343 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGARGASAKLFRADVLRHNKDLP 402

Query: 248 DAIESLK--LCDNSIMASICAAK-----SLISQNKKRKAEVILEK-----IWKVNPH--- 292
            A ++L+  L D+   A+    +      L  QNK  +A+ +L+        K+ P    
Sbjct: 403 QAEQTLRSLLSDDPQNAA---GRENLYYVLREQNKSAEAQAMLQTLPQNLQQKLQPRVVA 459

Query: 293 --PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
             P  A        + S N  G +           +     + ++++  + G+  +A + 
Sbjct: 460 GMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSL 519

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
              A +           A +  + +    +       
Sbjct: 520 MSAAYRPGASNNALYA-AALFASENGAWQQAQTLLAR 555



 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 88/266 (33%), Gaps = 43/266 (16%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--A 180
            L   +  LA+     A   L  M   P         L       GDL +A        +
Sbjct: 577 QLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGKLARLLAESGDLTTAVSLVRNNIS 636

Query: 181 LDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSL 234
             +S +A    +  AV+ Q  L      A   L   +  A       A +    +I  + 
Sbjct: 637 SGVSGNAGDYADQIAVLNQAGLTG---EAQNLLTNPQLQASSTPTQLASIRNGYVINEAD 693

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
              ++G+  A+Y   I +++    +       A+      K  K   +            
Sbjct: 694 RLREQGNYAAAYDKLIRAMQSDPQNTDLMFAMARLY-QSGKMNKEAGV------------ 740

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              +Y +L++ +T  +  RA  +                +AL  G+ D+A  +    ++ 
Sbjct: 741 ---VYDYLMTRDTPNQDARAGAI---------------DVALSAGNNDRA-EQLAGGLRQ 781

Query: 355 APRKEIFLLLAQIEQANSHNTDKILY 380
               +  LLLA++ +A  H+   + Y
Sbjct: 782 DNSPDRLLLLARVAEAQGHHQQAMTY 807


>gi|192359545|ref|YP_001981823.1| peptidase family M48 family [Cellvibrio japonicus Ueda107]
 gi|190685710|gb|ACE83388.1| Peptidase family M48 family [Cellvibrio japonicus Ueda107]
          Length = 490

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 62/215 (28%), Gaps = 29/215 (13%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L   +   GD   A                   A++     A++   A    +++  
Sbjct: 171 LAGLVLAANSEGDAGIA-------------------AIMGTQAAAQQ---ARLSFSRQ-- 206

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           N +E +R     +I   L+     +M      A    +     ++    + + +      
Sbjct: 207 NEQEADRIGMQTMIEAGLDPYAASEMFEEMMRANRLNRRPPEYLLTHPVSERRVADARN- 265

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVE-SLVIVSKI 334
            +A     K +  N   ++         E T     R      +   +S + S    +  
Sbjct: 266 -RAMKYPRKAYPDNLEYQLVRARIRANQEETPQIAARMFKSELDRESDSPDASRYGWALA 324

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIE 368
                  D A       ++  P +  + ++ A IE
Sbjct: 325 LSRSSQFDAAREALAPLLEKDPTRVTYQIMRADIE 359


>gi|209884514|ref|YP_002288371.1| TPR domain protein [Oligotropha carboxidovorans OM5]
 gi|209872710|gb|ACI92506.1| TPR domain protein [Oligotropha carboxidovorans OM5]
          Length = 599

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 65/197 (32%), Gaps = 11/197 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           +IG L  A+ Y  +AL      P     +   ++     +  I  +    + A   N   
Sbjct: 32  QIGRLAEAEAYYREALAAPRQQPDALHLLGVVFMQTGRLAPGIELI----RRAIGLNGTN 87

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                         GD+  +      +L+L  +   A       L+ Q K  +A V   +
Sbjct: 88  GEYFSNLGAGLNRLGDLAGAADAFRRALELKPDFATAFHDYGNVLLKQGKLDEALVSFTR 147

Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              ++P     H + A +            L        I  ++ E+L   + + L M  
Sbjct: 148 AIGIDPFYTNAHHQRAKVLQRFGRH--AEALAAFNEALAIKPDNAEALCRRALVLLAMKR 205

Query: 341 IDQAHAKAMLAMKIAPR 357
            D+A A A  A +I P 
Sbjct: 206 FDEALASAEEAKRIDPS 222


>gi|168701913|ref|ZP_02734190.1| hypothetical protein GobsU_20473 [Gemmata obscuriglobus UQM 2246]
          Length = 1470

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 15/198 (7%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +   L K+WS A+  L + + +          LL+A +   A   +           L  
Sbjct: 379 RLAALKKDWSTALRLLEEARPSIARAPALNKKLLVALAACYAAVLNPDKQLEYCRTVLAT 438

Query: 256 CDNSIMASICAAKSLISQNKKRKAE---VILEKIWKVNPHP------EIANIYTH--LLS 304
             +   A +  A++L   N+  +A      +   +++N H       E+ ++        
Sbjct: 439 EPDYPPAVVGEAEALAKLNRVGEALPRYRRIVNGYRLNEHRTELVRLELYHVLAQPGASG 498

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK----EI 360
           E    +   A++   + +  VE  V+ S      G  DQ   +  L +   P+       
Sbjct: 499 ERDWDRFNEAVKPVPVAERPVEMQVLCSDALAAQGKTDQGADELRLWIDKNPKSPKANAA 558

Query: 361 FLLLAQIEQANSHNTDKI 378
           F+ LA++    +  +   
Sbjct: 559 FVALARLNTGGTAESALA 576


>gi|145345890|ref|XP_001417432.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577659|gb|ABO95725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 209

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 12/167 (7%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             LA+    Y           + +               A       L        A+Y+
Sbjct: 45  GKLAKASTVYAMAIRRDPVSAVAHFNIGNAHFLAGDAASARVSYLAALDREPNYFKALYN 104

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKK 215
           L      IG +  A+ +  +A+D  P+    T A+   YV   +W +A       LN   
Sbjct: 105 LAIVIDSIGSVGEAKEWMKRAVDCRPNDSRATYALALLYVKLGQWKKAEYHFEQTLNLDA 164

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           K+A    +   +           +GD   S  + + +L++   ++ A
Sbjct: 165 KHAPSQVKLGNLA--------FRRGDFQRSGANYLNALEVDPGNVEA 203


>gi|124006390|ref|ZP_01691224.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123988047|gb|EAY27718.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 610

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 42/145 (28%), Gaps = 18/145 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQ-----IPATREF--AVYSLY--FESCRIGD--LNSAQ 174
                L +     A E  +  ++      PA       +   Y   ++    D     A 
Sbjct: 449 MGMAYLMKGDNAKAEESFKKAVEIGAGDNPAMTGLLNGIKGYYAIQQATSRDDGKYKEAY 508

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
                A    P+        +   + A ++ +A    N   K         A    A ++
Sbjct: 509 ELLASAASTVPNY---FNKGLAYLLEANDYEQAKASFNAAAKMND----KDATTFYALAV 561

Query: 235 ENADKGDMIASYHDAIESLKLCDNS 259
             A +G+      +  ++++L  + 
Sbjct: 562 VAARQGNEGELTQNLKKAVELKSDL 586


>gi|115752602|ref|XP_797370.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
           containing 3 [Strongylocentrotus purpuratus]
 gi|115939107|ref|XP_001195096.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
           containing 3 [Strongylocentrotus purpuratus]
          Length = 844

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV-TE 192
            Q + A    +   Q+   +    Y+L   + +      A ++  +A++I P        
Sbjct: 584 GQLDEAESLYQQAAQLEPLKADIHYNLGIVAMKKRQKPKALKHFDRAVEIDPKHKMALYN 643

Query: 193 AVVQQY----VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           + +          ++   AI  L +  +   E   + + L     +   D  D   +   
Sbjct: 644 SALYIQESGNAARRQ--DAIKRLQKVIEIDPESEMSYSTL----GMLAVDDNDNPGALQY 697

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENT 307
             ++L++  +S  A    A          +A+  LE + + +P H +   +   ++  + 
Sbjct: 698 YQKALEINPSSRHALFNIAMIHSDDKHPLQAKPYLENLLQHHPNHTKSMLLLGDIMLNSL 757

Query: 308 VGKLKR---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              +K      R+ ++   +V++   +  I ++ G   +     +  ++ AP  
Sbjct: 758 QDVIKSQQLFQRIVDLEPSNVQAQHNLCVIMVQKGLFMEGEQCLLDVLERAPHA 811


>gi|27379563|ref|NP_771092.1| hypothetical protein blr4452 [Bradyrhizobium japonicum USDA 110]
 gi|27352715|dbj|BAC49717.1| blr4452 [Bradyrhizobium japonicum USDA 110]
          Length = 696

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 62/162 (38%), Gaps = 11/162 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                  A   L +    A +   + A   +A       K +   +  +  +++ L  N 
Sbjct: 20  QGGRLEEAQQLLERAI--AIDPRSHEAHNNLAAVYVVLQKFEAARACQE--KAIALKPNF 75

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-HLLSENTVGKLKR----A 314
             A      +L++ N   +A  + ++  ++   P+ A+ +    L+E  + +L R     
Sbjct: 76  TPALTGLGNTLLNMNLPEQAIEMYDRAIRLK--PDYADAFCNRGLAELALRQLDRARQSF 133

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            R       +VE+LV    + +E+ + D+A      A+ I P
Sbjct: 134 ERALLFQPRNVEALVGKGLVNIELKNFDEAKGALEAALAIRP 175


>gi|330811721|ref|YP_004356183.1| hypothetical protein PSEBR_a4760 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379829|gb|AEA71179.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 574

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 8/133 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+  ++L     GD   +     ++           +  A+ L   N+  +A  +LEK  
Sbjct: 188 LIFGKALLLQQDGDTQGALTLLEDNPPEAGEVAPI-LLRARLLQGLNRGDEALPLLEKSI 246

Query: 288 KVNPHPE---IANIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K   +P+   +   Y  +L EN            L +   E  E    ++ + LE  + +
Sbjct: 247 KK--YPDDKRLRLTYARMLVENNRMDDAKVEFSSLVQQYPEDDELRYSLALVCLEAKAWE 304

Query: 343 QAHAKAMLAMKIA 355
           +A       +   
Sbjct: 305 EAKGYLEDLIARE 317



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 16/254 (6%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ-RYATKALDISPDAPWVTEAV 194
           +  A   LE ++   +  + A  +L   +    D  SA   YA            + +A 
Sbjct: 303 WEEAKGYLEDLIARESHVDSAHLNLGRIAEERNDPESALIEYAQVGPGNDYLPAQLRQA- 361

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               +   + + A + L  ++ +  ++      L +  +   A       +++   ++LK
Sbjct: 362 -DILIGNGKTADAQSRLAVQRDSQPDYGIQ---LYLIEAETLAANNQGDKAWNVLQQALK 417

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR- 313
              + +      A     +N   + E  L  I + +P   +A    + L      +  R 
Sbjct: 418 QYPDDLNLLYTRAMLAEKRNDLAQMEKDLRLIIQRDPDNAMA---LNALGYTLSDRTTRY 474

Query: 314 ------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
                   +  +IN E    L  +  +   +G++D+A      A++  P +E+   L ++
Sbjct: 475 DEAKLLIEQAHQINPEDPAVLDSLGWVNFRLGNLDEAERLLRQALERFPDQEVAAHLGEV 534

Query: 368 EQANSHNTDKILYW 381
             AN    +    W
Sbjct: 535 LWANGKQREARQIW 548


>gi|331238707|ref|XP_003332008.1| pol II transcription elongation factor [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309310998|gb|EFP87589.1| pol II transcription elongation factor [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 1107

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 13/169 (7%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-----AQRYATKALDISPDAPWV 190
              A E  +  L+  A        L  ++ R  D  S       + AT A+++S   P +
Sbjct: 56  TRAAMEYWKRDLKQDAISLAN-QGL--QALRDQDRPSECLPLLCQLATYAINLSRGLPTL 112

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSLENADKGDMIASYH 247
                +   +      A   L +      E +R  +   ++L AR+     +     +  
Sbjct: 113 KLETPEYDTIPPAQPTADETLEKAAHYINEASRIDSRNPLVLDARATLYLAQKHYDQALT 172

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PE 294
              E LK     + A +  A+ L  +   R A  + +++ K+ PH  P+
Sbjct: 173 ACEEILKERPTHLPALLGKARVLFHRKFFRPALKLYQQVLKLAPHVLPD 221


>gi|293415818|ref|ZP_06658461.1| yphG protein [Escherichia coli B185]
 gi|291433466|gb|EFF06445.1| yphG protein [Escherichia coli B185]
          Length = 1093

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 35/115 (30%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHGLNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L  SP    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRASPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|197362290|ref|YP_002141927.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|207856779|ref|YP_002243430.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197093767|emb|CAR59241.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|206708582|emb|CAR32903.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246898|emb|CBG24715.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301158236|emb|CBW17735.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 371

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
            + + A    + +++        R  AV  L        D  +A  Y  A    +   D 
Sbjct: 65  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 118

Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242
                   + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM
Sbjct: 119 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 178

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     +      NS   SI   +  +++    KA   L+++   +           L
Sbjct: 179 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 229

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351
           +SE          +L +  + +      V     +   L +  I +A   +  A      
Sbjct: 230 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 289

Query: 352 -MKIAPRKEIF-LLL 364
            ++  P   +F  L+
Sbjct: 290 QLQRHPTMRVFHKLM 304


>gi|166710805|ref|ZP_02242012.1| hypothetical protein Xoryp_04915 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 562

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 85/249 (34%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L +A+     
Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 372

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 429 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVGGKQDEARRYFDEAR 544

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 545 RLDPDNRAL 553


>gi|116623761|ref|YP_825917.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226923|gb|ABJ85632.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 775

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 88/320 (27%), Gaps = 52/320 (16%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            I  AR     + ++   +NE    L   + +        A   L  +L+       A+ 
Sbjct: 368 EIQRARDEFGALLKRDPQNNELRFNL--ARASRQAGDETQARSALVEILRRDPNHRNALR 425

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     +    + A +YA + + + P            + L    +     L +     
Sbjct: 426 ELADLEIQNQRPDEALQYAERLIALEPANIGARLVRTAAWALRGPKTEVRAELRRMIAER 485

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNKK 276
            +     A   +  +    D+G+   +       L+                   +Q + 
Sbjct: 486 PDM----AEPALQMATLEMDQGNYAEAERSYQR-LRATPKFDIRPLRGLVV-VYQAQGQS 539

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           RKA  ++++                                       ++   +++  A 
Sbjct: 540 RKALDLVQQE--------------------------------SKRTNDIQVRTLLATTAA 567

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLW 394
           + G +D A + A   +   P   +  + + Q+ +         + Y     L A  D   
Sbjct: 568 QAGDLDLALSTAQAILNDIPQDPKNLIFMGQLLEQKGQMEQAIVQYDRARQL-APKD--- 623

Query: 395 ISDDGYLSSVWLPLSPISKT 414
               G +++ +      +  
Sbjct: 624 ----GLVAARYGLALVNTGR 639


>gi|325281165|ref|YP_004253707.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
 gi|324312974|gb|ADY33527.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
          Length = 317

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 10/139 (7%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             LL  ++ L+ R Y    + +E    ++         +     E+   GD  +A++   
Sbjct: 162 ALLLRAEMMLSTRDYKDGLQDIEKVIGLMPEEENAFL-IRGRLHEAL--GDDQAAEQDYE 218

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
               ++P        +   Y+  ++  +AI   ++  +   E+ R        R      
Sbjct: 219 VVTGLNPFNEQAYLQLGTLYIAREQPDKAIELFDEAIELKPEFAR----AYSERGRAKLM 274

Query: 239 KGDMIASYHDAIESLKLCD 257
           KGD   S  D  ++L+L  
Sbjct: 275 KGDKNGSVEDLKKALELNP 293


>gi|260827022|ref|XP_002608464.1| hypothetical protein BRAFLDRAFT_231915 [Branchiostoma floridae]
 gi|229293815|gb|EEN64474.1| hypothetical protein BRAFLDRAFT_231915 [Branchiostoma floridae]
          Length = 1133

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-LAERQYNIAHEKLEMML--QIPATRE 154
             ++  A ++ + +++    +    + L    +    E   + A + L   L       ++
Sbjct: 975  GDMQQAEEVGTRIAKALAKNQTSWILLSMAALYWRVEGNGDRAIDCLRQALHFSQHRMKD 1034

Query: 155  FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             A+  +     R G  + A+  A  A++I+P        +   Y    +  +A+ +    
Sbjct: 1035 VALIGMANIFHRTGLWHDARVVAQMAVEIAPHLVVNHFTLANIYAAMGDIDKALKYYEMT 1094

Query: 215  KKNAKEW----NRNRAI--LLIARSLENADKGDMIASY 246
                 E+     R R +   ++ +    A+K     + 
Sbjct: 1095 VIIQGEFAPAMERLRTLQCNILMKRQREAEKDQQKDAR 1132


>gi|121634647|ref|YP_974892.1| putative periplasmic protein [Neisseria meningitidis FAM18]
 gi|120866353|emb|CAM10096.1| putative periplasmic protein [Neisseria meningitidis FAM18]
          Length = 616

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 74  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 133 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 186

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 187 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 244

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 245 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 304

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +      + A       ++    + A +  A+  +
Sbjct: 305 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 360

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 361 YTKVRQWLKK-VSAP 374


>gi|315125213|ref|YP_004067216.1| HemY [Pseudoalteromonas sp. SM9913]
 gi|315013726|gb|ADT67064.1| putative HemY [Pseudoalteromonas sp. SM9913]
          Length = 369

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M+ LI +   I LV+     V      V I++ N     +      +      A  L + 
Sbjct: 1  MIGLIIFIVAIVLVLAITPFVLDEKGYVLISFNNTTIEGTIVSFCIMAALSAAALYLTYK 60

Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSI 95
          + R+ LS      H    R+ ++ + A+   L S+
Sbjct: 61 LVRYCLSIYRNTKHGFFARSQERKHAAIEQALWSL 95


>gi|311068774|ref|YP_003973697.1| hypothetical protein BATR1942_09165 [Bacillus atrophaeus 1942]
 gi|310869291|gb|ADP32766.1| hypothetical protein BATR1942_09165 [Bacillus atrophaeus 1942]
          Length = 423

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 89/253 (35%), Gaps = 16/253 (6%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC 165
              +  +    +E ++     ++   +  Y  A +  +   +         V+    ES 
Sbjct: 122 QKLLKAKSILEDEPVIDFALGELYYTQGAYAKAIQYFKRTAEEQSEIGGVNVHQRLAESL 181

Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+L  A  +  KA++ +P+       +      A + +  +    ++  + KE + +
Sbjct: 182 SASGELEEAIPWYEKAVEETPE----PNTIFGYGFTASQ-AGFVKTAIKQLSDLKEIDPS 236

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            + L +  +     +G    +   A E +   + +    + AAK  +     ++ + +L+
Sbjct: 237 YSSLYMPLAESYEAEGMYEEALKTAKEGISYDEYNKELFLYAAKMTLKIGNVQEGKKLLQ 296

Query: 285 KIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +   ++P      H  +A    +L  E+    +     +    +E  +    ++    E+
Sbjct: 297 EALALDPGYVEALHTLLA---VYLKEEDYELIIDLIQEVRGYGEEDPKYNWYLASAYTEL 353

Query: 339 GSIDQAHAKAMLA 351
              ++A      A
Sbjct: 354 EKYEEAKKCFEAA 366


>gi|310795048|gb|EFQ30509.1| DnaJ domain-containing protein [Glomerella graminicola M1.001]
          Length = 520

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 15/200 (7%)

Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSA 173
           +  +  LL   Q  L++ Q + A    +  +    +       L+  +     +G  N A
Sbjct: 30  DTPVSSLLATAQSHLSKGQTSDALVYYDAAVARDPSNYLT---LFKRATTYLSLGRTNQA 86

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT--FLNQKKKNAKEWNRNRAILLIA 231
                + L + P        + +      +W  A     L +K   + E          A
Sbjct: 87  TDDFNRVLSLKPGFEGAHVQLAKIKSKTADWDGAREQYILARKDPTSPELVALDEAQGAA 146

Query: 232 RSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-- 288
           R  E A+K GD  A    A E++   + +I      ++    + +  +    L  + +  
Sbjct: 147 RLAEMAEKSGDWEACVGHAGEAIMTANRAISLREMRSRCRFQRGEVEEGMGDLHHVLQMR 206

Query: 289 ---VNPHPEIANIYTHLLSE 305
               +PH  IA I  + L +
Sbjct: 207 PGDTSPHITIAAITFYALGD 226


>gi|295398931|ref|ZP_06808913.1| TPR repeat-containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294978397|gb|EFG53993.1| TPR repeat-containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 420

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 72/238 (30%), Gaps = 46/238 (19%)

Query: 124 LLEVQIALAER----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L+   +   +           +  E M   P  +      L      +G  + +  +  K
Sbjct: 106 LIAADLYQMQGLEEVSERKLQQAYEKMPDEPIIQFA----LAELYFSMGQYSKSIPFYEK 161

Query: 180 ALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            L            E + +   L  E+ +A+ + ++  +   +        L    +   
Sbjct: 162 VLKKEKTIAGTHIPERLAEALSLCGEFEQALPYYDEALQEKLDSR-----TLFGYGVTAF 216

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
                  +     E   L    +   +  AK+   + +       LEK +      EIA 
Sbjct: 217 QAEYYQTAIEKLSELKALDPEFVPLYLYLAKAYEHEGQ-------LEKSY------EIAK 263

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
              H+                     + E L+   K+AL++G +D+A +    A++I 
Sbjct: 264 EGIHVDE------------------WNKELLLYAGKVALKLGKLDEAESWLKKAIEID 303


>gi|224079309|ref|XP_002189702.1| PREDICTED: similar to zinc finger, MYND-type containing 12
           [Taeniopygia guttata]
          Length = 448

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 13/100 (13%)

Query: 212 NQKKKNAKEWNRNRAILLIARSLENAD----KGDMIASYHDAIESLKLCD--------NS 259
            + +K+ KE    R   LIA +L  A      G  + +   A+++L+             
Sbjct: 37  EKDRKHGKEQLLRRQESLIAVALSTAQGFVWSGQPLEAIPAALQALRFSSRVFGSGSSQL 96

Query: 260 IMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANI 298
           +   +  A++     + R+A   L +  W V   P+ +  
Sbjct: 97  VPIYLLLAEASTGAGRLRQAAKYLSQAQWIVLQTPDCSAA 136


>gi|291190510|ref|NP_001167125.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
 gi|223648266|gb|ACN10891.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
          Length = 1158

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 45/307 (14%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +  + +L+           L   +   G+   A  +  +AL I+ D P     +   ++ 
Sbjct: 518 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 577

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAIESLK 254
            +EW        +  K     N   ++L +             D+         A+   K
Sbjct: 578 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYK 637

Query: 255 -----LCDNSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYT 300
                   N   A    ++ A K    + +      R+A   +  +W       +A+IY 
Sbjct: 638 QVLRNDSKNLYAANGIGAVLAHKGYYREARDVFAQVREATADISDVWLN-----LAHIYV 692

Query: 301 HLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                 +  +     LK+         ++ E L+ +++   + G + +     + A  +A
Sbjct: 693 EQKQYISAVQMYENCLKKF-----YKHQNTEVLLYLARALFKCGKLQECKQTLLKARHVA 747

Query: 356 PRKEIFL 362
           P   + +
Sbjct: 748 PSDTVLM 754


>gi|198431345|ref|XP_002124816.1| PREDICTED: similar to MGC78939 protein [Ciona intestinalis]
          Length = 347

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 20/159 (12%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDA 187
           A++      A E     +++  T+              R+   N+A R A KAL+I+PD+
Sbjct: 135 AMSNGDNEGAIEHFTAGIKLDNTKTVLFVKRG--TAYLRLAKPNAATRDAKKALEINPDS 192

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               + + +       W+ A       +K   +   +  +       E   K   I  + 
Sbjct: 193 AAAYKVLGKADKFLGNWAEACHNFEVAQKIDYDDEIHDLL------KEIKPKATKIREHT 246

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            A E  K           AA+      + +KA+   EK 
Sbjct: 247 MARERKKKEKE------IAARI----KRVKKAQKAQEKA 275


>gi|195115032|ref|XP_002002071.1| GI17182 [Drosophila mojavensis]
 gi|193912646|gb|EDW11513.1| GI17182 [Drosophila mojavensis]
          Length = 598

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 11/191 (5%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +    NA      R    I R+       +      D  E+ KL  ++       A+ L
Sbjct: 328 FDAILANADADITLRTYAYIRRAALFIQMEEREKGLADFAEAEKLKPDNPDVYHQRAQIL 387

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLL------SENTVGKL-KRALRLEEI 320
           +   +   A V  +K  ++ P+  IAN+   Y           +N++ ++ K      + 
Sbjct: 388 LLLEQIDAALVEFDKAVRLAPNHAIANVQKCYAEYRLALMSGDQNSLERVIKDFELAIKK 447

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN-SHNTDKIL 379
             + VE   +++++  +     QA     +AMK AP     L+   I       + D  +
Sbjct: 448 FPDCVECYSLMAQVLADQQQFPQAQNFYDMAMKRAPTNPALLVHQAIMMLQWRGDIDAAV 507

Query: 380 YWTQSALHAMP 390
                A+   P
Sbjct: 508 SLLNRAIEVDP 518


>gi|161503186|ref|YP_001570298.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864533|gb|ABX21156.1| hypothetical protein SARI_01254 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 389

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 17/164 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
            + + A    + +++        R  AV  L        D  +A  Y  A    +   D 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136

Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242
                   + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM
Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQLGNDDM 196

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +     +      NS   SI   +  +++    KA   L+++
Sbjct: 197 ERAMALLKKGAAADKNSARVSIMMGRVYMAKGDYAKAVESLQRV 240


>gi|158301431|ref|XP_321122.4| AGAP001939-PA [Anopheles gambiae str. PEST]
 gi|157012467|gb|EAA01154.4| AGAP001939-PA [Anopheles gambiae str. PEST]
          Length = 696

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 81/252 (32%), Gaps = 37/252 (14%)

Query: 176 YATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI----L 228
            A++  +  PD     ++++    Q    K++  A+  L    +          +     
Sbjct: 336 LASRLANAHPDLE--FQSLLVRVSQLARDKKYREAVELLEAYAQRLPAGRTTELLQVRFA 393

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286
           ++   L   ++   I +     E+ +     + A +      +  + K+ A  IL+    
Sbjct: 394 IVQLQLVAGNRKAAIETLESLGEA-RYQPGVVSALVT---LHLGLDNKQAASEILKSAVE 449

Query: 287 WKVNPHP------EIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           W            ++++++      HL         K    L   +   ++   +++++ 
Sbjct: 450 WYKRQKSATISDSDLSDMWRQAASFHLRGGEPETAAKSLEELLRTHPNDMK---LLAQLV 506

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395
           +     D    +A  A K  P  E    +++I+   + N      W   A      P   
Sbjct: 507 IAYAQFDP--KRAQQASKRLPALETLTTVSEIDALEATN------WMMIAKAVKRKPNQP 558

Query: 396 SDDGYLSSVWLP 407
           +  G  +    P
Sbjct: 559 AGGGRTTGDQSP 570


>gi|149919241|ref|ZP_01907724.1| hypothetical protein PPSIR1_02451 [Plesiocystis pacifica SIR-1]
 gi|149819955|gb|EDM79377.1| hypothetical protein PPSIR1_02451 [Plesiocystis pacifica SIR-1]
          Length = 376

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 37/111 (33%), Gaps = 5/111 (4%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNR-----AILLIARSLENADKGDMIASYHDAIE 251
               A ++  A    ++     +  +  R     A L + R L   + G+   +      
Sbjct: 222 LRREAGDYDGARAAFDRALARMRAGSTPRHQQTLAWLALQRGLVEWETGNPKEALRYYQG 281

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           +     +  + +   A++  +  +  +A  +  +    +  PE+ +    L
Sbjct: 282 AHAAFPDWWLVTEHRAEAHAALGEHHEAISLYRQALDHSHQPELMDALAAL 332


>gi|114328818|ref|YP_745975.1| TPR repeat-containing protein [Granulibacter bethesdensis CGDNIH1]
 gi|114316992|gb|ABI63052.1| tetratricopeptide repeat family protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 598

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 68/198 (34%), Gaps = 8/198 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ +IG+   A+  +   LD+SP  P     + Q  +     S A   L++  K     
Sbjct: 45  RQAFKIGNAAVAEELSLAVLDLSPYDPDALLMLSQIRLAQNNHSAAKALLSRLVKANPNL 104

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A+ L   +  + +  ++  +   A  +++       A       L    +    E 
Sbjct: 105 ----AVQLTQLARLHMEVRELKDAERVARMAIRADPTLADAHNVLGMILSEAGELIGGEA 160

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALE 337
                  +   P+   +     +    G+ + A     +   +  +  ++++  + +  +
Sbjct: 161 CYRHTIAMIDQPDAIILANLAWNLTLQGRFEEAASSYEQSLSLAPDVPQTVIGHALLERK 220

Query: 338 MGSIDQAHAKAMLAMKIA 355
            G +++A      A + A
Sbjct: 221 AGRLEKARDILSQAYEKA 238


>gi|326798999|ref|YP_004316818.1| hypothetical protein Sph21_1586 [Sphingobacterium sp. 21]
 gi|326549763|gb|ADZ78148.1| Tetratricopeptide TPR_2 repeat-containing protein [Sphingobacterium
           sp. 21]
          Length = 583

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 108/317 (34%), Gaps = 32/317 (10%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           ++L    ++I A     A+ +   + Q      E   YL    + L     + A    + 
Sbjct: 25  QSLKDAQVAIDAEQYAKAKSILKNLVQNKPKDAENYFYL--GDVYLVTDYPDSAKTFFQQ 82

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQYVL 200
            L+           L   +   G+   A++  T+A + +         +V  A +   + 
Sbjct: 83  GLEADPKDNLNKVGLGAVALVQGNTAEAEKLFTEATEKAKKKDYLENLYVGRAYMNPNLE 142

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             ++ +A+ +L +     KE N+  A++  +        GD   +Y +  ++  L +   
Sbjct: 143 KPDYKKALPYLEKA----KEANQKDALIPSSLGDAYFGMGDASNAYTNYRDAYDLDNTFT 198

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------------LSENTV 308
            A +             +A   L  I  +  HP+ A  Y  L             SE+  
Sbjct: 199 RARVQMTVISKQARAFPEAVQDLNTI--IQEHPDYAPAYRELAETYNAYAQFATKSEDYN 256

Query: 309 GK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRKEIF 361
            +    LK   +  ++   S++S +  +   ++         +A       K+ PR   +
Sbjct: 257 SRIQEALKAYKQYMDLTDYSLDSRMRYADFMIKARDYKNLEEQANEMAKLDKVNPRILRY 316

Query: 362 LLLAQIEQANSHNTDKI 378
           L  A  E  N  ++ K 
Sbjct: 317 LGYASYENGNYPSSQKA 333


>gi|325919956|ref|ZP_08181941.1| Tfp pilus assembly protein PilF [Xanthomonas gardneri ATCC 19865]
 gi|325549572|gb|EGD20441.1| Tfp pilus assembly protein PilF [Xanthomonas gardneri ATCC 19865]
          Length = 691

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 16/203 (7%)

Query: 162 FESCRIGDLNSAQRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216
            ++ R    + A   A +    A D +    W+  A+ QQ       + A+  +      
Sbjct: 6   LQALRRNAADDAVALAREWVISAPDNAATHRWLGLALQQQQGQP---ALALASIETALTL 62

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             ++ + +     +  +  +    D   S   A     L  N   A +  A   +++   
Sbjct: 63  TPEDADLHLLRAGLLLATRDLSAADAALSRTTA-----LDPNQFNAYVMQAHLAVARGDL 117

Query: 277 RKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
             A+ +     ++ P HP++  +     L    +   L    R  +   +    L  +  
Sbjct: 118 DDAQRLSRTAARLAPEHPQLLAVDGVVELRRGQSDHALSLLTRAAQQLPDDPRVLFALGF 177

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
             L+      A       +++ P
Sbjct: 178 AYLQKEHFAFAERAFERVVELNP 200



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 24/192 (12%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +   GDL+ AQR +  A  ++P+ P     + VV+      +   A++ L +  +   + 
Sbjct: 111 AVARGDLDDAQRLSRTAARLAPEHPQLLAVDGVVELRRGQSD--HALSLLTRAAQQLPDD 168

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R    +L A       K     +       ++L           A+    Q +   A  
Sbjct: 169 PR----VLFALGFAYLQKEHFAFAERAFERVVELNPPGTALRAFIAQLAQRQGRLDDALA 224

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            ++ ++   P  +I            + +L   + L+    +       V+ + L +   
Sbjct: 225 AMQGVF-AQPGGDI----------PAMRRLAGEMELQAGRPDQ-----AVAHLRLALAHW 268

Query: 342 DQAHAKAMLAMK 353
                     + 
Sbjct: 269 PADRRTLHALLT 280


>gi|308186996|ref|YP_003931127.1| hypothetical protein Pvag_1488 [Pantoea vagans C9-1]
 gi|308057506|gb|ADO09678.1| Uncharacterized protein yciM precursor [Pantoea vagans C9-1]
          Length = 389

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 41/194 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL VQ      +A   Y+ A +  + +     T 
Sbjct: 83  GEVDRAIRIHQALMESASLSYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFKQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       RIG                       + ++  +    +W +AI    +
Sbjct: 139 F-----------RIG---------------------ALQQLLLIHQATSDWQQAIEVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  KE  +   A      +L+     D+  +     +      NS   SI   + L+ 
Sbjct: 167 LVKLGKEKQKGEIAHFYCELALQAMSSDDLDRAMSLLKKGEAADRNSARISIMMGRILME 226

Query: 273 QNKKRKAEVILEKI 286
           +    +A   L+++
Sbjct: 227 KEDYARAVGHLQRV 240


>gi|300309989|ref|YP_003774081.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
 gi|300072774|gb|ADJ62173.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
          Length = 542

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 49/151 (32%), Gaps = 3/151 (1%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A E  +  L +     +A   L   +   G ++ A+      L  +       + + Q
Sbjct: 186 DEAREVYKQALGMRDDLVWAKIGLARCNIVAGQMDDARAIVEDVLAQNKQFIAAYDLLAQ 245

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                     A+  L +  +      R+R +  +A    + D+     +Y   ++  K  
Sbjct: 246 IDEAQGNQEGALEALTRSSEIIPSARRSRLVGDVAYRSGHLDQA--REAYDKVLKHTKGS 303

Query: 257 DNSIMASICA-AKSLISQNKKRKAEVILEKI 286
             +    + + A+  I       A  +LE  
Sbjct: 304 LTAQPTDLLSLAQVHIDSGDADAALRLLESA 334


>gi|238504042|ref|XP_002383253.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357]
 gi|220690724|gb|EED47073.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357]
          Length = 727

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 22/195 (11%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A+    A+     ++     + +    ++  +      +   A + L++ + +       
Sbjct: 381 ANENSYAKAQDIAMNMLRQNNQDPDALMIRARAFYGLGETEQALKTLKICISLDP----- 435

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                       D+ SA +       +         A       AK++ +AI   +Q  +
Sbjct: 436 ------------DMKSAIKLLRTVQKLMRTKEEGNNAF-----KAKDYRKAIDLWSQALE 478

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                    A +L  R+  + +  +   +  D  E+L+L  + + A    AK+  +    
Sbjct: 479 VDPSNKDMNAKILQNRAQAHINLKEYDNAVKDCTEALRLDPSYVKAQKIRAKAHGAAGNW 538

Query: 277 RKAEVILEKIWKVNP 291
            +A    + + + NP
Sbjct: 539 EEAVRDYKAVAESNP 553


>gi|196232526|ref|ZP_03131378.1| sulfotransferase [Chthoniobacter flavus Ellin428]
 gi|196223288|gb|EDY17806.1| sulfotransferase [Chthoniobacter flavus Ellin428]
          Length = 738

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 11/106 (10%)

Query: 289 VNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +P P+    +   +  L +  T    + A  L     +      +++ IAL+  +  +A
Sbjct: 2   THPTPDPRQRLEAAFEDLRAGRTKEAQQAADGLRRTFPDHAGVRNLLALIALDQQAPQRA 61

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                 A+++ PR+ I+         N     + L     A+ +  
Sbjct: 62  AQHLEHAIRLDPREPIY-------HCNLGEARRALQEMDKAIESFR 100


>gi|21326645|gb|AAL30085.1| NodB-like protein [Xanthomonas campestris pv. campestris]
          Length = 900

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           K  +R RA L   R L+   +     +     E+LKL  +  +A+         Q +  +
Sbjct: 779 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 838

Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A   LE   K++P        + + Y     +    + K       +  +   +    ++
Sbjct: 839 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 896

Query: 334 I 334
           +
Sbjct: 897 L 897


>gi|296807879|ref|XP_002844278.1| pre-mRNA-splicing factor clf1 [Arthroderma otae CBS 113480]
 gi|238843761|gb|EEQ33423.1| pre-mRNA-splicing factor clf1 [Arthroderma otae CBS 113480]
          Length = 678

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183
           ++Y  A    +  L   P ++  A+ S Y    +  GD         +  +    + +  
Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237
           +P    +   + +    + +  R      +        +  + W R   + +     E  
Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376

Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +  D+  +     E LKL            +  A+  I Q     A   L +   + P  
Sbjct: 377 ENQDIERARQIYTECLKLIPHKKFTFAKIWLMKAQFEIRQLDLVLARKTLGQAIGMCPKD 436

Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           ++   Y  +     E +  +     +  E N    ES +  +++   +  +++A A   L
Sbjct: 437 KLFRGYIDIERKLFEFSRCR-TLFEKQIEWNPSQSESWIKFAELERGLDDVERARAIYEL 495

Query: 351 AM 352
            +
Sbjct: 496 GI 497


>gi|218779986|ref|YP_002431304.1| response regulator receiver protein [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761370|gb|ACL03836.1| Response regulator receiver domain protein (CheY-like)
           [Desulfatibacillum alkenivorans AK-01]
          Length = 383

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 64/228 (28%), Gaps = 43/228 (18%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
               + A +     +       F+   L     +  D  +A ++  +A+ ISP       
Sbjct: 182 NNNLDDAEKCFLAAINRNKLDVFSFNQLGELYMQRQDFENAAKFLDEAMKISPRQLDRGI 241

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +    +      +A    ++    ++E N  R                           
Sbjct: 242 RLGTVLLQTGMRDKARQTFDKTISVSREQNETRE-------------------------- 275

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN---IYTHLLSENTV 308
                               +   R A  +L +I +  P  P++     ++   L +N  
Sbjct: 276 ------------MIVDICEKEGDIRYAANLLIEILQNTPGRPDLLVRLGLFLEELGDN-Q 322

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +KR     +++ +     + +++  L M     A       +K  P
Sbjct: 323 EAVKRLTLASDLDAKDPRIKMHLARNYLAMKRPMWAEKYLNQVLKADP 370


>gi|119496787|ref|XP_001265167.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
           putative [Neosartorya fischeri NRRL 181]
 gi|119413329|gb|EAW23270.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4),
           putative [Neosartorya fischeri NRRL 181]
          Length = 1098

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 18/159 (11%)

Query: 160 LYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L+ E+      GD  +A     +A+ I+P+       + + ++   +  +A+T L     
Sbjct: 165 LHSEATSAFIDGDYETAIDLVKRAIHINPEMFAAHSLLSEIFLAQGQKDKALTALF---- 220

Query: 217 NAKEWNRNRAILLIARSLENADKG--DMIASYHDAIESLKLCDNSIMASICA----AKSL 270
           +        A +    +    D+   D  A+ +D I  L    +    +  A    A   
Sbjct: 221 SGAHTRPRDASVWFKVAQMILDRAGDDRPAALNDVIYCLSRVIDIEPKNYNARFQRAAVY 280

Query: 271 ISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304
                  +A    E+I K  PH       +A  Y  L  
Sbjct: 281 RELGHNGRAVTEYERILKEVPHHPRALRNLAEAYIDLNE 319


>gi|118580646|ref|YP_901896.1| hypothetical protein Ppro_2231 [Pelobacter propionicus DSM 2379]
 gi|118503356|gb|ABK99838.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 265

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 56/200 (28%), Gaps = 12/200 (6%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G+  L   L      +I  A   +           + L  L    +     Q+  A    
Sbjct: 42  GFFYLGDAL--AEDGHIDKAIVAYREGLAIAPDDTDALTTL--GDLLFESGQHEAAIASY 97

Query: 144 EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             + ++            L + S   GD   A     +AL+  P   +   A+       
Sbjct: 98  TRVRELEPGDMDVLVSIGLVYSSLDRGDE--AIACFRQALESDPRNVFAWNALGDALYGG 155

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +   A+       +   E + +             D  ++  +  +  ++++L     M
Sbjct: 156 DDVQGAVD----AYRKGVEIDPDDPAAHFNLGELYYDMDELEEAEQECCQAVRLDPCFSM 211

Query: 262 ASICAAKSLISQNKKRKAEV 281
           A +      + Q +   A  
Sbjct: 212 AYLTLGSICMDQERLEDAVR 231


>gi|111224569|ref|YP_715363.1| hypothetical protein FRAAL5188 [Frankia alni ACN14a]
 gi|111152101|emb|CAJ63828.1| hypothetical protein; putative TPR domains [Frankia alni ACN14a]
          Length = 147

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 2/102 (1%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y     G+  +   +   A ++ ++            V     +   +  QY  A E   
Sbjct: 30  YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALGRAQFSAGQYVAARETFA 87

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++    T ++A + L   + +IGDL +A  +   A+ + PD
Sbjct: 88  WIVDRHPTDDYAQFGLGLSARKIGDLRAAVEHLALAVAMRPD 129


>gi|21240973|ref|NP_640555.1| hypothetical protein XAC0199 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106258|gb|AAM35091.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 710

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 63/198 (31%), Gaps = 7/198 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++ R    + A   A + +  +PD       +        + + A+  ++       E 
Sbjct: 26  LQALRRDAADDAVALAREWVTNAPDHAAAHRWLALALQQQGQPALALDSIDTALTLTPE- 84

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A L + R+       D+ A+      +  L  N   A +  A   +++    +AE 
Sbjct: 85  ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 141

Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     ++ P HP++  +     +        L    R  E   +    L  +    L+ 
Sbjct: 142 LSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 201

Query: 339 GSIDQAHAKAMLAMKIAP 356
                A       +++ P
Sbjct: 202 EHFAFAERAFERVIELNP 219



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 16/292 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  + S  +       +  ++LL     LA R  + A   L     +   +  A   
Sbjct: 66  GQPALALDSIDTALTLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVM 125

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217
               +   GDL+ A+R +  A  ++P+ P     + VV+      +  RA++ L +  + 
Sbjct: 126 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMR--RGQDDRALSLLTRAAEQ 183

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +     A +L +       K     +       ++L           A+    Q +  
Sbjct: 184 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLD 239

Query: 278 KAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            A   ++ +    P  ++  +        L +                      +L  + 
Sbjct: 240 DALAAMQGV-LDQPDGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALL 298

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382
                +G++D A      A+  +       L  LA            I  W 
Sbjct: 299 TAWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 350


>gi|255036666|ref|YP_003087287.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254949422|gb|ACT94122.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
           18053]
          Length = 471

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 31/210 (14%)

Query: 167 IGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            GD N A +  T  + ++PD              +        ++ RAI           
Sbjct: 63  TGDFNGAMQAYTTVISMNPDHAPSYFNRGLAKANLKDYRGAMGDYDRAIEL--------- 113

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             N   A+   +R +  + + D  ++  D  ++++L      A      S       R A
Sbjct: 114 --NPKEALYYQSRGVSKSLQDDYRSAIDDYSKAIELNPEEPKAYYNRGVSYAKLKNHRNA 171

Query: 280 EVILEKIWKVNPHPEIANIYTHLL--------SENTVGKLKRALRLEEINKESVESLVIV 331
            V L+    +NP  E+A +Y            + +      R + L      +     + 
Sbjct: 172 LVDLDHALSLNPD-ELAALYARGNCKQDLQEYAGSLAD-FTRVIELSPKRTGAYAGRGL- 228

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
               LE+G    A A    A++++P    +
Sbjct: 229 --AKLELGDYQGAAADFTRAIELSPNDSEY 256


>gi|171915121|ref|ZP_02930591.1| TPR domain protein [Verrucomicrobium spinosum DSM 4136]
          Length = 1820

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 44/150 (29%), Gaps = 12/150 (8%)

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                  Q   TR    Y  +    R     SA   A K        P +   ++     
Sbjct: 81  RAHRERPQDAETRL--HYGYHVLHRRG--PMSAWSLAAKPESCENLTPELHADLIALRAA 136

Query: 201 A----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                ++++ A + L    K   E     A L   ++     +     +     E+L+L 
Sbjct: 137 VAALYRDFNVAESLLTSALKLDPES----AWLATEQARFLQAQEKREEALSRLDEALQLR 192

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI 286
                A    A+ L   N+  +A   L + 
Sbjct: 193 PWFRPAVQHRARLLHLLNRHGEAVAYLTEA 222



 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 54/189 (28%), Gaps = 16/189 (8%)

Query: 167  IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             G    + R   +  +++PD     + + Q      +   A+  L    K     N  R 
Sbjct: 1029 QGRNEESLRAFRRTTELNPDWDQAWQDLAQLQEDLGQAEDALHTLRTALKRMPRENNLRM 1088

Query: 227  ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVIL 283
            +L    ++     G+    +      L+       A       A  L  Q         +
Sbjct: 1089 LL----AIFLWRAGERQEPWELVESCLRDDPGLQRAWGILSAWAPLLHRQQSLEDLARSV 1144

Query: 284  EKIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +      HP  A ++      L  E    +L+       I     E+    + +  E G
Sbjct: 1145 TRE-----HPAQARLWMMLARVLRPEAVEERLQAVDHALAIRPRLAEAYDFKAILLSEQG 1199

Query: 340  SIDQAHAKA 348
              ++A    
Sbjct: 1200 KFEEARKAL 1208


>gi|138752634|emb|CAM32314.1| putative cellulose synthase operon protein C [Cronobacter
           sakazakii]
          Length = 1167

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 41/159 (25%), Gaps = 9/159 (5%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R              +     + L     A        A  + + +L      E A   L
Sbjct: 584 RDSGQEAQAIALLRQQPPSDRIDLTLADWAQQRGDNATARAQYQTVLTRSPASEEARLGL 643

Query: 161 YFESCRIGDLNSAQ----RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QK 214
                  GD  +A+       T A    P +P     +        + +RA         
Sbjct: 644 AEVLIAQGDNAAAREQLVALQTPAAGGEPRSPDTQRRIANAEAALGDTARAQQAFAVLAA 703

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +  ++  A++L   +      G    +     +++
Sbjct: 704 TAKTQPPSQESALVLRDAARFQRQNGQPQQALQTYRDAM 742



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 90/273 (32%), Gaps = 17/273 (6%)

Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL  Q   AL       A +K +    +  T  +AV  L   +    D  +A+RY  +AL
Sbjct: 353 LLIQQGDAALKANNLAQAQQKYQQAATVDNTDSYAVLGLGDVAVAKKDDAAAERYYRQAL 412

Query: 182 DISPDAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENA 237
            +           A + +    +     I  L   ++ + +          L  ++    
Sbjct: 413 RMDNTNSNAVRGLANLYRRQSPERAEAFIATLPASQRRSIDDIERSMTNDRLEQQAAALE 472

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296
            +G    +     + L L  +S+  +   A  L S  ++R A+ ++ ++ +  P  PE  
Sbjct: 473 AEGRFADAAAVQRQRLALDPDSVWITYRLANDLASAGQRRDADAVMGQLAQRKPGDPEQV 532

Query: 297 NIYTHLLSENTVGK--LKRALRLEE--INKESVE-SLVI----VSKIALEMGSIDQAHAK 347
             Y   LS +   +  L     L         +E S  +    + + A  +    Q    
Sbjct: 533 YAYGLYLSGSDRQRAALSHLNTLARDKWTPNILELSQRLQTNELMETANRLRDSGQEAQA 592

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
             L  +  P   I L LA   Q    +      
Sbjct: 593 IALLRQQPPSDRIDLTLADWAQ-QRGDNATARA 624



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 46/162 (28%), Gaps = 14/162 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                    Q   A   L                L   + + GD  +A+      L  SP
Sbjct: 579 TANRLRDSGQEAQAIALLRQQPPSDRIDLT----LADWAQQRGDNATARAQYQTVLTRSP 634

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-----KEWNRNRAILLIARSLENADKG 240
            +      + +  +   + + A   L   +  A     +  +  R I     +L +  + 
Sbjct: 635 ASEEARLGLAEVLIAQGDNAAAREQLVALQTPAAGGEPRSPDTQRRIANAEAALGDTARA 694

Query: 241 DMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKA 279
               +   A    K    S  +++    AA+      + ++A
Sbjct: 695 QQAFAVLAATA--KTQPPSQESALVLRDAARFQRQNGQPQQA 734


>gi|290511888|ref|ZP_06551256.1| outer membrane autotransporter barrel domain-containing protein
           [Klebsiella sp. 1_1_55]
 gi|289775678|gb|EFD83678.1| outer membrane autotransporter barrel domain-containing protein
           [Klebsiella sp. 1_1_55]
          Length = 1342

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 42/367 (11%), Positives = 98/367 (26%), Gaps = 79/367 (21%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           + +   +R      +A   G  ++ + N   A++    V Q +    + L  +    IA 
Sbjct: 253 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 307

Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176
               Y  A + L                   +   Y    ++    + G+++ A      
Sbjct: 308 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 367

Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                 A  A         L  + D P   + +        + +     L    +   + 
Sbjct: 368 LAQQSGARGASAKLFRADVLRHNKDLPQAEQTLRSLLSDDPQNAAGRENLYYVLREQNKS 427

Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258
              +A+L                          ++      G+   +     E +    +
Sbjct: 428 AEAQAMLQTLPQNLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPD 487

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
                +  A+ L       +A  ++   ++  P      +Y   L  +  G  ++A  L 
Sbjct: 488 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNNALYAAALFASENGAWQQAQTLL 545

Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359
                  ++               +  ++  L  G+   A           P+      +
Sbjct: 546 ARIPGGSQTSDMRDLRQRVNYNLQLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGK 605

Query: 360 IFLLLAQ 366
           +  LLA+
Sbjct: 606 LARLLAE 612



 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 91/277 (32%), Gaps = 29/277 (10%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188
                 A ++ E +LQ       A+  + + + R GD  +A +Y ++A D+  DA     
Sbjct: 275 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 334

Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               +A+    +   + +     ++Q    +    +       +  L  AD         
Sbjct: 335 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGARGASAKLFRADVLRHNKDLP 394

Query: 248 DAIESLK--LCDNSIMASICAAK-----SLISQNKKRKAEVILEK-----IWKVNPH--- 292
            A ++L+  L D+   A+    +      L  QNK  +A+ +L+        K+ P    
Sbjct: 395 QAEQTLRSLLSDDPQNAA---GRENLYYVLREQNKSAEAQAMLQTLPQNLQQKLQPRVVA 451

Query: 293 --PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
             P  A        + S N  G +           +     + ++++  + G+  +A + 
Sbjct: 452 GMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSL 511

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
              A +           A +  + +    +       
Sbjct: 512 MSAAYRPGASNNALYA-AALFASENGAWQQAQTLLAR 547



 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 88/266 (33%), Gaps = 43/266 (16%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--A 180
            L   +  LA+     A   L  M   P         L       GDL +A        +
Sbjct: 569 QLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGKLARLLAESGDLTTAVSLVRNNIS 628

Query: 181 LDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSL 234
             +S +A    +  AV+ Q  L      A   L   +  A       A +    +I  + 
Sbjct: 629 SGVSGNAGDYADQIAVLNQAGLTG---EAQNLLTNPQLQASSTPTQLASIRNGYVINEAD 685

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
              ++G+  A+Y   I +++    +       A+      K  K   +            
Sbjct: 686 RLREQGNYAAAYDKLIRAMQSDPQNTDLMFAMARLY-QSGKMNKEAGV------------ 732

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              +Y +L++ +T  +  RA  +                +AL  G+ D+A  +    ++ 
Sbjct: 733 ---VYDYLMTRDTPNQDARAGAI---------------DVALSAGNNDRA-EQLAGGLRQ 773

Query: 355 APRKEIFLLLAQIEQANSHNTDKILY 380
               +  LLLA++ +A  H+   + Y
Sbjct: 774 DNSPDRLLLLARVAEAQGHHQQAMTY 799


>gi|196228742|ref|ZP_03127608.1| Tetratricopeptide domain protein [Chthoniobacter flavus Ellin428]
 gi|196227023|gb|EDY21527.1| Tetratricopeptide domain protein [Chthoniobacter flavus Ellin428]
          Length = 863

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 7/145 (4%)

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             D  A+ +   ++LK   N + A +  A   I       A   + K+  +NPH   A+ 
Sbjct: 223 SSDTEAAENALEQTLKFNPNHLPARLLMADQFIDGENYDVAAREIAKVLAINPHLAEAHA 282

Query: 299 Y----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           Y     +L ++    +  RA  L+     + E   ++ K   +     +  A    A+K 
Sbjct: 283 YRAVLANLQADPKTEEAARAEALQLW-PTNPEIPHLIGKKLSQKYRFAEGAALQREALKW 341

Query: 355 APR--KEIFLLLAQIEQANSHNTDK 377
            P        L   + +   H+ + 
Sbjct: 342 DPSYLPAKAQLANDLLRLGGHDDEA 366



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 86/282 (30%), Gaps = 55/282 (19%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVYSLYFESCRI-G 168
           H    E    LL+ +   A  +Y  A   L      PA         +  L +E+ R  G
Sbjct: 61  HDQPEEDAWPLLQAKALNAVGRYQEARAIL-----DPAIEHSPNSLQLRLLSYETLRRLG 115

Query: 169 DLN-SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
               +A++ A                 + +   ++EW+         +         R+ 
Sbjct: 116 ATEEAAKQLAE----------------LDRLGGSREWA--------YRSPGDRVALARSA 151

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKI 286
           LLI          D        ++ L+    +     + + +  +S++    A  I    
Sbjct: 152 LLIG--------TDPKKVLDVILDPLRKSQPDFRDTYLVSGELALSKSDFALAGRIFGTA 203

Query: 287 WKVN-PHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            K     P+    +A  Y    +E     L    +  + N   + + ++++   ++  + 
Sbjct: 204 VKKFGEDPDIWFGLARAYVSSDTEAAENAL---EQTLKFNPNHLPARLLMADQFIDGENY 260

Query: 342 DQAHAKAMLAMKIAP---RKEIFLLLAQIEQANSHNTDKILY 380
           D A  +    + I P       +  +    QA+    +    
Sbjct: 261 DVAAREIAKVLAINPHLAEAHAYRAVLANLQADPKTEEAARA 302


>gi|168260077|ref|ZP_02682050.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205350584|gb|EDZ37215.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 389

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 13/162 (8%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  +     A    +   D   
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAAGLYDR----AEDMFNQLTDETE 138

Query: 190 ----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIA 244
                 + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM  
Sbjct: 139 FRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDMDR 198

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     +      NS   SI   +  +++    KA   L+++
Sbjct: 199 AMALLRKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240


>gi|169764699|ref|XP_001816821.1| DnaJ and TPR domain protein [Aspergillus oryzae RIB40]
 gi|83764675|dbj|BAE54819.1| unnamed protein product [Aspergillus oryzae]
          Length = 727

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 22/195 (11%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A+    A+     ++     + +    ++  +      +   A + L++ + +       
Sbjct: 381 ANENSYAKAQDIAMNMLRQNNQDPDALMIRARAFYGLGETEQALKTLKICISLDP----- 435

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                       D+ SA +       +         A       AK++ +AI   +Q  +
Sbjct: 436 ------------DMKSAIKLLRTVQKLMRTKEEGNNAF-----KAKDYRKAIDLWSQALE 478

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                    A +L  R+  + +  +   +  D  E+L+L  + + A    AK+  +    
Sbjct: 479 VDPSNKDMNAKILQNRAQAHINLKEYDNAVKDCTEALRLDPSYVKAQKIRAKAHGAAGNW 538

Query: 277 RKAEVILEKIWKVNP 291
            +A    + + + NP
Sbjct: 539 EEAVRDYKAVAESNP 553


>gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group]
 gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
           Japonica Group]
 gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
           Japonica Group]
 gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group]
 gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group]
          Length = 1011

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 10/96 (10%)

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDA 249
           A + +    + WS+AI  L+     +        NRA       L      D   +    
Sbjct: 6   AELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALE-- 63

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                L    + A +   K+L +  K+ +A  + E+
Sbjct: 64  -----LDPALLQAYVLKGKALSALGKREEALAVWEQ 94


>gi|292491513|ref|YP_003526952.1| hypothetical protein Nhal_1414 [Nitrosococcus halophilus Nc4]
 gi|291580108|gb|ADE14565.1| Tetratricopeptide TPR_2 repeat protein [Nitrosococcus halophilus
           Nc4]
          Length = 304

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 14/196 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            N  LA K +    +Q   H   L    LL+    L ++++++A +KL   ++I   R  
Sbjct: 100 GNTELAEKAYRDTLKQKANHAGALEGFGLLQ----LHKKEFDLAKDKLAAAVKIDPKRWR 155

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A   L   +    D  +AQ++   AL+I P  P +   +   + LA  W  A +F  +  
Sbjct: 156 AHNGLGVIADLRKDYVTAQQHYQAALEIKPGLPLLLNNLGYSHYLAGNWKLARSFFEKIL 215

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             AK+    +A   +   L    +G    +   A +++     S+         L+ +  
Sbjct: 216 --AKDSRHEKAWANLG--LIYVRQGHHDEA-TSAFQNIMDEPESL---YHIGYILMMEGD 267

Query: 276 KRKAEVILEKIWKVNP 291
            R A     K    +P
Sbjct: 268 HRTAANYFRKAISASP 283


>gi|284122500|ref|ZP_06386846.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283829344|gb|EFC33740.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 552

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 16/206 (7%)

Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L+ E+    R G L+ A+    + L   P        +         + RA+  +++  +
Sbjct: 17  LFEEAVNHHRGGRLSQAETCYQQVLTQDPAHADALHLLGLVAYQQGRYDRALDCISKAIQ 76

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                   + +      L + +   +  +     ++L L  + + A       L  Q + 
Sbjct: 77  RDAT----KPLYFYNLGLVHQNLNQLREAERAYRQALALKSDYVEALGNLGNVLREQGEL 132

Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTH-LLSENTVGKLKRALRLEEINKESVESLVI 330
             A    +++  + P HPE    +          +      +RA+ L   N E+ E+   
Sbjct: 133 DAACAAYKQVLTIKPDHPEGYNNLGVALKEQGKRDEAKDAYQRAIAL---NPENAEAHCN 189

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  I  E   +D+A ++   A+ + P
Sbjct: 190 LGAILFEDERLDEAISRFEHAVSLKP 215



 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 51/159 (32%), Gaps = 2/159 (1%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+    + +  A + +       + + E L  L    +   + + + A    + +L I 
Sbjct: 89  GLVHQNLNQLREAERAYRQALALKSDYVEALGNL--GNVLREQGELDAACAAYKQVLTIK 146

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                   +L       G  + A+    +A+ ++P+       +       +    AI+ 
Sbjct: 147 PDHPEGYNNLGVALKEQGKRDEAKDAYQRAIALNPENAEAHCNLGAILFEDERLDEAISR 206

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                     + +    L +AR  +   +G +      A
Sbjct: 207 FEHAVSLKPHYAKAHHHLGLARLWKQDTEGALHELRTSA 245


>gi|225871875|ref|YP_002753329.1| non-specific serine/threonine protein kinase [Acidobacterium
           capsulatum ATCC 51196]
 gi|225792350|gb|ACO32440.1| non-specific serine/threonine protein kinase [Acidobacterium
           capsulatum ATCC 51196]
          Length = 877

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 98/287 (34%), Gaps = 33/287 (11%)

Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             A+ + ++A E+    M   P     A+  L       G    A+    +A ++ PD+ 
Sbjct: 584 YRAQGKQDLALEQFQRAMQLDPR-NADALDGLARVHENAGRFQDAKAEFVRAANLQPDSW 642

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A+   Y    ++ +AI      +    +     A +L+  +    D+GD  AS H 
Sbjct: 643 DGYNALGMFYDRQGKYPQAIAAYQSARAITPD----NATVLLNLAGAYEDQGDP-ASLHK 697

Query: 249 AIESLKLCDNSIMASICAA---KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS- 304
           A   L+            A        +++  +A   L +  + N    +  ++  L   
Sbjct: 698 AEGLLRRSLALHPTYAGWANLGNLYYLEHRFPEAVDALRRALQFNAANYL--VWDDLRGS 755

Query: 305 ----------ENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                     ++T  K K+      + +     ++V  + +  + G    AH     A+ 
Sbjct: 756 CEWVKDKACVQSTSEKEKQMLRTYVKNHPHDAVAVVSYADLLAQAGQNSLAHNYIQTALA 815

Query: 354 IAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALH-------AMPDP 392
           I+P        +A + +   +  + + Y    AL        A+ DP
Sbjct: 816 ISPDDPSTLEAVAVVYENLGNRKEAVRY-LNQALRKGYSRNQALSDP 861


>gi|229918431|ref|YP_002887077.1| TPR repeat-containing protein [Exiguobacterium sp. AT1b]
 gi|229469860|gb|ACQ71632.1| TPR repeat-containing protein [Exiguobacterium sp. AT1b]
          Length = 219

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 13/210 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A+ + ++  A +     ++   T      ++      I D + A  +  KA+++      
Sbjct: 10  AMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKAIELDGSFGA 69

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A        ++   A   L Q   +  +     A L     L     GD + +    
Sbjct: 70  AHYAKGALAYELEQLESAEASLRQALLSGMD----DADLHFMLGLTYKAMGDFVRAMPRL 125

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLS 304
            E+ K     +  +     +L    +  +A V LE+   ++  H +    +A  Y  L  
Sbjct: 126 REAKKQSPEDVEITFQYGLALAQSEQLEEAVVALEETLDLDASHTDARYNLAIAYAFLGD 185

Query: 305 -ENTVGKLKRALRLEEINKESVESLVIVSK 333
            E T  +L+R     E+  +   +   V+K
Sbjct: 186 QERTYAELQRV---LEMQPDHELARDAVAK 212


>gi|171915650|ref|ZP_02931120.1| Peptidase C39, bacteriocin processing [Verrucomicrobium spinosum
           DSM 4136]
          Length = 1656

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 55/191 (28%), Gaps = 15/191 (7%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAITFLNQKK 215
               +   + D + AQ      L   PD+PW  E+ +     +     +  A  +    +
Sbjct: 72  GKAIQKWNLHDYDEAQLLFLDHLTKYPDSPWAAESELHLGCASQYLGRYDEAQKWFEASQ 131

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             A          L+   +   D+G++  +     +      +   A +  A   I    
Sbjct: 132 TRADLGQPMHQKALLRLGVVAMDRGELSKASELFAQLRANDGD--PARMTYASYWIRALS 189

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             KA+   E   +      +  I   ++   T  +  RA  L+            + ++ 
Sbjct: 190 LMKAK---ETALRDCGQKSLGEIC-KVMGNETNARELRA--LDAAGPH----GFTIQELE 239

Query: 336 LEMGSIDQAHA 346
                   A  
Sbjct: 240 QTARRYGMAAR 250


>gi|167751933|ref|ZP_02424060.1| hypothetical protein ALIPUT_00175 [Alistipes putredinis DSM 17216]
 gi|167660174|gb|EDS04304.1| hypothetical protein ALIPUT_00175 [Alistipes putredinis DSM 17216]
          Length = 370

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 30/67 (44%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           NR + + L  +++E  D GD         ++L L  +    +   A + + +   +KA  
Sbjct: 26  NREQVLALQRQAIELMDNGDPDQGIVLLRQALTLDPDYWPLTYEMAYAYMVKRDYQKAIK 85

Query: 282 ILEKIWK 288
           + + ++K
Sbjct: 86  LAKTLYK 92


>gi|138895365|ref|YP_001125818.1| TPR repeat-containing protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266878|gb|ABO67073.1| TPR-repeat-containing protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 1386

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 55/184 (29%), Gaps = 10/184 (5%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE 163
           +    + Q        L + L  +IA    +Y  A       LQ  P   E   Y+    
Sbjct: 546 RAEQALKQAKGKRQSPLYHYLRGRIAFFMSRYEEAVRHFRASLQLDPDQPEVWSYTALAS 605

Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +   G        +  A+ + P          ++  +      + A  + +    +    
Sbjct: 606 AYA-GYTERGLVCSRIAVHLHPGDLFIETNHGLLLFHAKRL--AEARKWFD----HLVRR 658

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R  A L   R+  + + G    +      +  L        +  A       K+ +A+ 
Sbjct: 659 ERRDAHLWYERARCDLELGHRRKAERGFRVAKALDPREPYPYVMLADLYDDDGKREQAKA 718

Query: 282 ILEK 285
           +L++
Sbjct: 719 VLKE 722


>gi|326386010|ref|ZP_08207634.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209235|gb|EGD60028.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 882

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 98/346 (28%), Gaps = 60/346 (17%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH---------- 140
           G++   +     A       +       E  ++ +       + + + A           
Sbjct: 53  GVLQATSGAFAQAETAFRRAADLRPADAE--IHFMLGVTLQQQGKADEAAAAFRRASSLN 110

Query: 141 ------------------------EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
                                   + LE ++++      A  +L     + G  + A   
Sbjct: 111 PQHELALLALGTTLQEIGRTGEALDALERLIRLNPASLDAHNNLGVALIQAGQPDKAAAA 170

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---TFLNQKKKNAKEWNRNRAILLIARS 233
              AL + PDAP     +V   + A+ +  A+     L +      +     A++L+   
Sbjct: 171 LETALHLRPDAPDTLYNLVAALLSARRFDAALVRSEQLLRMVPRDPQALMQHALVLVEAG 230

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
             +     + A      +               A +L++  +  +A  + ++  +  P  
Sbjct: 231 RGDEALAHLDAMLAQLPQGAAGAPLRAAILGHRAIALMALGRPEQALDVYDEALRAAP-- 288

Query: 294 EIANIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
             A+   H                L  A      N  + ++  ++    L +G    A  
Sbjct: 289 --ADADIHANRALALLALRRPYDALVSAQMAARHNSAAPQAHNVLGLAHLRLGEYGAAAT 346

Query: 347 KAMLAMKIAPR-----KEIFLLLAQIEQANSHNTDKILYWTQSALH 387
                + + P        +   LA++E+ +  +      W   AL 
Sbjct: 347 AFGQGLALRPDDPDMLSHLATALAELERHDEAD----RLW-ARALT 387



 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 17/208 (8%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-----GDMIASYHDAIESLKL 255
           +++   AI  L ++ +      R +A+L    S  +A            ++  A  + + 
Sbjct: 12  SRDQIEAILTLARQGRMGDALPRAQALLAAHPSAFDAAHLVGVLQATSGAFAQAETAFRR 71

Query: 256 CDNSIMASI----CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN---TV 308
             +   A          +L  Q K  +A     +   +NP  E+A +      +    T 
Sbjct: 72  AADLRPADAEIHFMLGVTLQQQGKADEAAAAFRRASSLNPQHELALLALGTTLQEIGRTG 131

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQ 366
             L    RL  +N  S+++   +    ++ G  D+A A    A+ + P     ++ L+A 
Sbjct: 132 EALDALERLIRLNPASLDAHNNLGVALIQAGQPDKAAAALETALHLRPDAPDTLYNLVAA 191

Query: 367 IEQANSHNTDKIL-YWTQSALHAMPDPL 393
           +  A   +   +        +    DP 
Sbjct: 192 LLSARRFDAALVRSEQLLRMV--PRDPQ 217


>gi|322421643|ref|YP_004200866.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320128030|gb|ADW15590.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 598

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 11/169 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G    A+    + +   P +      +            A   L +    + E    
Sbjct: 20  LRKGMQEEARAQLRELVRQEPPSTAACYLLAVLRGEDGSPEEAAELLARTL--SLEPENV 77

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A+  +  +L+  +      +     E+L++    + A I  A  L    +  +AE++L 
Sbjct: 78  KALNALGAALQQLE--QPEQALSCYREALRIKPGFLEARINLALLLKEALRFSEAELVLR 135

Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESL 328
                  HP+   ++ +L +       ++  +        ++ + +++ 
Sbjct: 136 DG--TELHPDSVRLHYNLANVLHYQGRSLEAVAAYRETLRLDPDHLDAR 182


>gi|241713562|ref|XP_002412106.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215505183|gb|EEC14677.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 778

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 157 VYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LN 212
           +  L  E+      GD   A +   + + + P AP   + +   Y    + ++A+ F L 
Sbjct: 11  LQGLMGEANLCFARGDHEDAIKMCMEVIRLVPRAPEPFQTLGMLYEEMGDPAKALQFSLI 70

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
               +  + +    +  ++      ++GD+  +      +++   +++   +        
Sbjct: 71  GAHLSPDDADEWARLGELS-----LEQGDVRQATTCYARAVRADPSNLDLRLELCTLYEQ 125

Query: 273 QNKKRKA 279
             ++RKA
Sbjct: 126 AGEQRKA 132


>gi|195381697|ref|XP_002049582.1| GJ21672 [Drosophila virilis]
 gi|194144379|gb|EDW60775.1| GJ21672 [Drosophila virilis]
          Length = 655

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---D 241
           P +    + +  +++   +   AI   +              +L + R+     +G   D
Sbjct: 364 PTSIEQHKKLGNEHLENGKLLAAIDTYSAALAEYPRGE----VLYLNRATALMRRGWFGD 419

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + A+  D  E+L+L    + A    A++L+  ++ ++A+  L++
Sbjct: 420 IYAALRDCHEALRLDPTYVKAHFRLARALLELHRPQEADKCLQE 463


>gi|195160004|ref|XP_002020866.1| GL14152 [Drosophila persimilis]
 gi|194117816|gb|EDW39859.1| GL14152 [Drosophila persimilis]
          Length = 586

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +  RA   + R+           +  D   + KL  +S       A+ L+  +    A  
Sbjct: 330 DTIRAYAYMKRASLYMQVNKRDEALADFDAAEKLKPDSPDVYHQRAQILLLLDSINPALE 389

Query: 282 ILEKIWKVNPHPEIA---NIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIV 331
             EK  ++ P+  IA     YT           +     +++  +  +   + VE   ++
Sbjct: 390 QFEKAVRLAPNHAIAYVQKCYTKYRLALMTNNQQGLESVVRQLEQAIDQFPKCVECYSML 449

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +++  +  + DQA      AMK+AP      
Sbjct: 450 AQVMADQQNFDQAQQYYDKAMKLAPTNAALF 480


>gi|163846279|ref|YP_001634323.1| hypothetical protein Caur_0695 [Chloroflexus aurantiacus J-10-fl]
 gi|222524035|ref|YP_002568505.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163667568|gb|ABY33934.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222447914|gb|ACM52180.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 1766

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 23/183 (12%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +H   N     LL  +  LA+R    A    E +LQ+      A   L       G L+ 
Sbjct: 34  EHHPDNLEAQRLL-GEAYLAKRDLPAATATFEQVLQVDPENIPAHVGLGMAYEWQGRLDK 92

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     +AL+I PD P +   +V+ Y  A                   W    A L ++R
Sbjct: 93  AIAEFEQALEIRPDMPELRAQLVRLYTEA-------------------WGSEHAALRLSR 133

Query: 233 ---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +   A    +  + H+  + +    + + A +   ++L    +  +A  +     K 
Sbjct: 134 PGLARLYARGHMLPQAIHEFRQVIAEHPDRLDAWVGLIEALWRDGQLDEAATVCRDALKQ 193

Query: 290 NPH 292
            PH
Sbjct: 194 QPH 196



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 63/196 (32%), Gaps = 16/196 (8%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           + E+ +I     A       L+  PD       + + Y+  ++   A     Q  +   E
Sbjct: 16  FLEANQI---EQAIGLIQHILEHHPDNLEAQRLLGEAYLAKRDLPAATATFEQVLQVDPE 72

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                    +   +    +G +  +  +  ++L++  +         +          A 
Sbjct: 73  ----NIPAHVGLGMAYEWQGRLDKAIAEFEQALEIRPDMPELRAQLVRLYTEAWGSEHAA 128

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           + L +       P +A +Y           +    ++   + + +++ V + +     G 
Sbjct: 129 LRLSR-------PGLARLYA--RGHMLPQAIHEFRQVIAEHPDRLDAWVGLIEALWRDGQ 179

Query: 341 IDQAHAKAMLAMKIAP 356
           +D+A      A+K  P
Sbjct: 180 LDEAATVCRDALKQQP 195


>gi|330941704|gb|EGH44461.1| TPR repeat-containing protein [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 446

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 8/130 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+  ++L     GD   S    +E     +  I   +  A+ L S N+ ++A  +LEK  
Sbjct: 67  LIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSI 125

Query: 288 KVNPHPE---IANIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K   +P+   +   Y  +L E         +   L +   +  E    ++ + LE  + D
Sbjct: 126 KK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWD 183

Query: 343 QAHAKAMLAM 352
           +A       +
Sbjct: 184 EAAGYLEELI 193


>gi|171910644|ref|ZP_02926114.1| type II/III secretion system protein [Verrucomicrobium spinosum DSM
           4136]
          Length = 816

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 70/215 (32%), Gaps = 23/215 (10%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P       A  +          A   + +  K   E +   A+     +L+      M A
Sbjct: 18  PSGSASGIAQRELARREARVQEAQAAMERGDKLFAEGDYEGALNEYKAALDLLPDAPMTA 77

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           S  DA  + + CD    A++  A+      +  +A+ +L      N  P+       L+ 
Sbjct: 78  SLRDAATA-RYCD----AAVELARERAKNGRYAEAKALLNDALARN--PDHVKAKKLLVE 130

Query: 305 ENTVGKLKRALRLEEINKES------VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357
            +   + +       +  E       VE  + +      +G  D A      A++I    
Sbjct: 131 LDDPVRYE-----PALTPEHVKNVGEVERHLQMGYSYYNIGDYDAAIRTFQDALRIDKYN 185

Query: 358 --KEIFLLLAQIEQANSHNTDK--ILYWTQSALHA 388
                 +  A+ +++   +T +        +A++A
Sbjct: 186 GAARRGMERAEQKRSEYFDTARDHQRAKMLNAVNA 220


>gi|170017047|ref|YP_001727966.1| TPR repeat-containing protein [Leuconostoc citreum KM20]
 gi|169803904|gb|ACA82522.1| TPR repeat protein [Leuconostoc citreum KM20]
          Length = 420

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 7/132 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDI 183
           L  Q     +Q   A    +  L    T    +Y L   +  + GD  +A+ Y  KAL I
Sbjct: 245 LLGQSYERLQQPEEAFRVYQAGLIQDETN-TKLYHLAGHAAEKSGDDTAAEAYYQKALSI 303

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                     +   Y+   ++++A++ L ++ K  ++   N  +  I +++     GD  
Sbjct: 304 DESDTTALFMLADLYLQHNQYAQALSLLEKENKEIEDERFNWYLARIYQAI-----GDDG 358

Query: 244 ASYHDAIESLKL 255
            +     E+  L
Sbjct: 359 KAKQYWQEATPL 370


>gi|85720009|gb|ABC75573.1| hypothetical protein [Ictalurus punctatus]
          Length = 202

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 7/158 (4%)

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI 295
               +M  +     + LK C +S+   +  ++      +  +A  ILEK    NP  PE+
Sbjct: 33  EQSENMDKARDAYNQGLKKCPHSMPLWLLLSRLEERVGQLTRARAILEKSRLKNPQSPEL 92

Query: 296 ANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                 L     +  +  A  L     +E   S ++ ++ A+ + +  Q   K++ A+K 
Sbjct: 93  WLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILWAE-AVFLEARPQRKTKSVDALKK 149

Query: 355 -APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                 + L +A++  +      K   W    +   PD
Sbjct: 150 CEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEPD 186


>gi|299136529|ref|ZP_07029712.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298601044|gb|EFI57199.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 540

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 86/282 (30%), Gaps = 43/282 (15%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL    + N   A +  ++V+ +       L  ++  Q     RQ        +      
Sbjct: 265 GLAHFNSANYAAAEQAFAFVATRL-----PLPEVVNDQAVALSRQGKDGAAFFQRASTAD 319

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            + E   Y+L     R GD   A + A  AL + P+                        
Sbjct: 320 PSDEDYHYNLAIALFRRGDTAGALKEADAALKLKPNDNEAGS----LRAHLSLVPAGTKL 375

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +    +     R R     A   + A + D + +   A+           A    A   
Sbjct: 376 TDSATNSFSPVERIRRNYSEAGLRQAAFQLDQMRAARMAM--------LPPAQ--QATEY 425

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
               +   A+ +L +                   E               +  S  + V 
Sbjct: 426 TQLGRDYLAQGLLPEA----------------EGE--------FQSALTADPNSAAAHVG 461

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
           ++++    G+  +A  +A  ++KI P    +L+LA+++ A++
Sbjct: 462 LAQVREASGNAAEARDEARKSLKIQPSATAYLVLARLDLADN 503


>gi|296230983|ref|XP_002807781.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
           13-like [Callithrix jacchus]
          Length = 890

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 85/244 (34%), Gaps = 21/244 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 239 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 298

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 299 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 351

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYT 300
           + D  +SL+L  N  +A +    +   +   ++A    ++  K     ++ +  +   Y 
Sbjct: 352 HEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYR 411

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E+
Sbjct: 412 ELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEV 469

Query: 361 FLLL 364
              +
Sbjct: 470 CQYM 473


>gi|262304955|gb|ACY45070.1| acetylglucosaminyl-transferase [Amblyomma sp. 'Amb2']
          Length = 287

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 6/168 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   +    +    H + L  L    I   +     A       L++      A  +L  
Sbjct: 39  AEDCYQTALRLCPTHADSLNNL--ANIKREQGFVEEATRLYLKALEVFPEFAAAHSNLAS 96

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              + G L  A  +  +A+ ISP        +        +   A+   ++  +    + 
Sbjct: 97  VLQQQGKLTEALLHYREAIRISPTFADAYSNMGNTLKEMGDVQGALQCYSRAIQINPAF- 155

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
              A      +  + D G++  +      +LKL      A    A  L
Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIASYRTALKLKPEFPDAYCNLAHCL 200



 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 11/160 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             AL + P        +            A     +  +   E+    A      +    
Sbjct: 44  QTALRLCPTHADSLNNLANIKREQGFVEEATRLYLKALEVFPEF----AAAHSNLASVLQ 99

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292
            +G +  +     E++++      A      +L      + A     +  ++NP     H
Sbjct: 100 QQGKLTEALLHYREAIRISPTFADAYSNMGNTLKEMGDVQGALQCYSRAIQINPAFADAH 159

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             +A+I  H  S N    +       ++  E  ++   ++
Sbjct: 160 SNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 11/184 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A+D+ P+ P     +        + + A        +         A  L   +    
Sbjct: 10  RRAIDLQPNFPDAYCNLANALKEKSQVTEAEDCYQTALRLCPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G +  +    +++L++      A    A  L  Q K  +A +   +  +++P    A+
Sbjct: 66  EQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTEALLHYREAIRISPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +      +  G L+   R  +IN    ++   ++ I  + G+I +A A    A+
Sbjct: 124 AYSNMGNTLKEMGDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183

Query: 353 KIAP 356
           K+ P
Sbjct: 184 KLKP 187


>gi|253702402|ref|YP_003023591.1| hypothetical protein GM21_3814 [Geobacter sp. M21]
 gi|251777252|gb|ACT19833.1| TPR repeat-containing protein [Geobacter sp. M21]
          Length = 615

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 98/307 (31%), Gaps = 25/307 (8%)

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAA---HNIPLARKMHSYVSQQHTFHNEYLVYL 124
            P      L +        A+    ++  +        A K +          N YL  L
Sbjct: 313 DPQRAAAALREHLARFPKHAVAHNDLAAISYQLGEKEQALKHYREAVWLDPKENVYLKNL 372

Query: 125 LEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
               I   E  + + A      +L+        + +L      +G    A+ +  +AL+I
Sbjct: 373 --ADILFVEAGEADEAIAIYLRLLEQSPRDVETLLNLGIICESVGQPAEAESFYQRALEI 430

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P   W   A  Q   L +          + +  A +     A     RS E   +GD+ 
Sbjct: 431 EP---WNQAARQQLTALRQR-------TEEPQPPAAKDEDLAAEDRYQRSQELVSQGDLD 480

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298
            ++ +  E L    +   A    A     Q  K +A    EK  ++ P        +A+ 
Sbjct: 481 GAFQELKEILLSYPDFAPAHNDLAVLAYQQGDKEQARAHYEKAAELAPGNGTFQKNLADF 540

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-- 356
           Y  +   +  G +   L       +++E+L+ + KI   +    +A +     + + P  
Sbjct: 541 YF-VEGYDVDGAIAIYLEQLRREPKNIETLMGLGKICTILDRPVEAQSFYGKVINLEPWN 599

Query: 357 -RKEIFL 362
                 L
Sbjct: 600 RDARECL 606


>gi|182681839|ref|YP_001829999.1| TPR repeat-containing protein [Xylella fastidiosa M23]
 gi|182631949|gb|ACB92725.1| Tetratricopeptide TPR_2 repeat protein [Xylella fastidiosa M23]
 gi|307578088|gb|ADN62057.1| hypothetical protein XFLM_00135 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 690

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 65/214 (30%), Gaps = 20/214 (9%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA---------------LA 132
           L     + A      A++  +   QQ+  H   L                        LA
Sbjct: 20  LARAWCASAPGEAQ-AQRWLAAALQQYGEHKAALTASEAALALAPELPELHLQHGLLLLA 78

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +   + A   L    ++   +          +   G L+ A++ +  A  I  D P +  
Sbjct: 79  QHDLSGADAALSRSTRLDPNQFNTYVMQAHLAIARGALDEAEQLSRTAARIISDHPQLLA 138

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                 +   +  +A+  L+Q  +   E       +L +       KG +  +       
Sbjct: 139 VNATITLHRGQVDQALAMLSQAVELLPE----EPAVLFSLGFAYLQKGHIAFAERAFQRV 194

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           ++L  + I      A+    Q +   A  ILE+ 
Sbjct: 195 IELNPHVIPVRALIAQLAQRQGRLDDALRILEEA 228



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 101/301 (33%), Gaps = 34/301 (11%)

Query: 92  LMSIAA----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L+++ A    H   + + +            E  V        L +     A    + ++
Sbjct: 136 LLAVNATITLHRGQVDQALAMLSQAVELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVI 195

Query: 148 QIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWS 205
           ++       V +L  + + R G L+ A R   +AL +   D P +     +  ++A    
Sbjct: 196 ELNP-HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELMAGNPD 254

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           RA+  L Q      E  R    LL A    + D  D   +   A++  K   +       
Sbjct: 255 RALPHLRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKKRNHDL-----W 308

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KE 323
            A+  ++     +A +++E+             +   + E+          L  ++  + 
Sbjct: 309 LARLSVAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQN 351

Query: 324 SVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
           + E+   V++  +A+E G +          ++  P   +  L   IE    H    +  W
Sbjct: 352 NPEAAETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVACLQQLIESVPEHERTILRPW 411

Query: 382 T 382
            
Sbjct: 412 L 412


>gi|171316042|ref|ZP_02905269.1| serine/threonine protein kinase [Burkholderia ambifaria MEX-5]
 gi|171098846|gb|EDT43638.1| serine/threonine protein kinase [Burkholderia ambifaria MEX-5]
          Length = 1349

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 6/162 (3%)

Query: 101  PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAV 157
             +AR+     +         +  L   +        + A      +L++      R    
Sbjct: 1164 AMAREAVYCATCLDHLPTLGVTMLYLARTYQLAGDRDAARSLSAALLRLSEAHRLRAVGH 1223

Query: 158  YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y+    +    D      +  A +         +    + +      ++  A+  + Q  
Sbjct: 1224 YAAIIHAWAQEDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAGRGDYDAALAQIRQCL 1283

Query: 216  K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                    R     L+ +  E   + D       A+++ +  
Sbjct: 1284 AWCESTGERYYEAQLLLKQCEYLRRADPRCGGVAALDACRRA 1325


>gi|94969422|ref|YP_591470.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94551472|gb|ABF41396.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 736

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 14/206 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-LAKEWSRA---ITFLNQKKKNAKEW 221
           R    + A++   +A+ I P        V      L   W  +   +       + A E 
Sbjct: 470 RRKSFDYARQMFARAIVIDPTYARAYAGVSDCCSHLYMYWGGSADDLKEAEAASRKAVEL 529

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +   A   ++R L          +  +  ++  L      A    A+    +    KA  
Sbjct: 530 DPELAEGHVSRGLALQMVKKYEEAEAEFGKATDLNPKLFEAYYFFARLCFQRGNLEKAAD 589

Query: 282 ILEKIWKVNP----HPE-IANIYTHLLSE-----NTVGKLKRALRLEEINKESVESLVIV 331
           + E+    NP     P  +A     L             +K   R  E++ E   +L + 
Sbjct: 590 LFERARLANPEDYQTPILLAQTLESLERHLEAKAARARAMKLFERHVELHPEDARALYLG 649

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   ++   +D+A      A+ I P 
Sbjct: 650 ASGLIDAKQMDRALDWTNRALSIDPD 675



 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 52/194 (26%), Gaps = 5/194 (2%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
                  K     S++    +  L   ++         ++Y  A  +      +      
Sbjct: 510 GGSADDLKEAEAASRKAVELDPELAEGHVSRGLALQMVKKYEEAEAEFGKATDLNPKLFE 569

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLN 212
           A Y       + G+L  A     +A   +P     P +    ++      E   A     
Sbjct: 570 AYYFFARLCFQRGNLEKAADLFERARLANPEDYQTPILLAQTLESLERHLEAKAARARAM 629

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  +   E +   A  L   +    D   M  +      +L +  +        A S   
Sbjct: 630 KLFERHVELHPEDARALYLGASGLIDAKQMDRALDWTNRALSIDPDDPAVLYNVACSYAK 689

Query: 273 QNKKRKAEVILEKI 286
                KA   +EK 
Sbjct: 690 LAMSEKAMDCIEKA 703


>gi|301058162|ref|ZP_07199214.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300447794|gb|EFK11507.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 482

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 18/223 (8%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
               + + A  + E  LQ+      A  ++       G++  A ++   A+ I P    +
Sbjct: 269 QRRGKLDEALLQYEKALQLRPNFAVAHDNMGLIFMAKGNIPEAVKHTGMAVRIRPGNAII 328

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                Q  +       A     Q  +    +   +A   +  +L    K     +    +
Sbjct: 329 QNNYGQLLLRQGRIEEAAKHFYQAVRIKPRY--AKAQNNLGIALAQQKKLK--EAKEHLL 384

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
            + +L  N+        +  + Q   ++A    E    +  +P  A   T+L       +
Sbjct: 385 LAARLDPNNPEILNNVGQVFMLQGNSKEAVRYFEAT--IQQNPNFAQALTNL----GFMR 438

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           LK      +   +     + V+        + +A     LA+K
Sbjct: 439 LK--ENRMDEAAQYFHRALAVA------PDMGRARQGLNLAIK 473



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 43/112 (38%), Gaps = 1/112 (0%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++A        K H  ++ +   +N  ++  +  Q+ + +     A    E  +Q    
Sbjct: 368 IALAQQKKLKEAKEHLLLAARLDPNNPEILNNV-GQVFMLQGNSKEAVRYFEATIQQNPN 426

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
              A+ +L F   +   ++ A +Y  +AL ++PD     + +         W
Sbjct: 427 FAQALTNLGFMRLKENRMDEAAQYFHRALAVAPDMGRARQGLNLAIKAKGSW 478


>gi|254804737|ref|YP_003082958.1| hypothetical protein NMO_0749 [Neisseria meningitidis alpha14]
 gi|254668279|emb|CBA05178.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|325132285|gb|EGC54978.1| tetratricopeptide repeat protein [Neisseria meningitidis M6190]
 gi|325135920|gb|EGC58530.1| tetratricopeptide repeat protein [Neisseria meningitidis M0579]
          Length = 612

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +LK     +  +  A      Q +++ KA   L+++ K       
Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +      + A       ++    + A +  A+  +
Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 356

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 357 YTKVRQWLKK-VSAP 370


>gi|15896690|ref|NP_350039.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15026540|gb|AAK81379.1|AE007842_7 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|325510854|gb|ADZ22490.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018]
          Length = 305

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 4/125 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  +  L I    E A Y L        D   A +   KA+ I+P+       
Sbjct: 56  GKVEKAEEYYKEALSIDDYEERAYYGLATIYDEKEDYEEAIKLYNKAIYINPNYHKAYFF 115

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   Y L+ + + AI     K  +  + +    + L        ++     +Y    ++L
Sbjct: 116 LANAYDLSGQKNLAIETYE-KLLSLDDMDFWSNLNL---GCIYEEQNKNDLAYRLFSKAL 171

Query: 254 KLCDN 258
           K+  N
Sbjct: 172 KINPN 176


>gi|134293931|ref|YP_001117667.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4]
 gi|134137088|gb|ABO58202.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4]
          Length = 1189

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 62/213 (29%), Gaps = 11/213 (5%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A       +    T   A+ +      ++G  + A     +AL + P         
Sbjct: 687 DPERALTDFNAAIATKPTFVDALVNSAIALEQLGRHDEALLRCDRALALEPRHACALATR 746

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                     + AI    +      + +    ++L   +           ++     +L+
Sbjct: 747 GNAASQLGRHTDAIDSYARAL----DADPLSTVVLCNFADALMRVDRHADAHALCERALE 802

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVG 309
           L      A    A+  +  ++   A   L +   + P  ++A     +    L   +   
Sbjct: 803 LDPQCAPAWFTRARVRLETHRYDDALDDLSRAIALAPLDKLAHFHRGHALRALRRHD--D 860

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            L    R+ +I+ +   +    + + L  G  +
Sbjct: 861 ALHAYARVLDIDPDDAAAHCTRAFLCLSTGDFE 893


>gi|182677316|ref|YP_001831462.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 301

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 11/174 (6%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P +    +     Y    ++S AI+  +Q  K     + N A     R+L         
Sbjct: 81  NPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIK----LDPNNAPAYTNRALAYRQSNRND 136

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---- 299
           A+  D   ++++      A +  A  L  Q    +A+  L++  K+N  PE A  +    
Sbjct: 137 AALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLN--PENAQAFHARG 194

Query: 300 -THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +    N    +       + +  +    +   +  +  G  D+A      A+
Sbjct: 195 LIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDFNAAL 248


>gi|88603325|ref|YP_503503.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88188787|gb|ABD41784.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 314

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 47/163 (28%), Gaps = 8/163 (4%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           L    ++ A    + +LQ           L       G+   A     + L   PD  W 
Sbjct: 72  LLNGSFSEATRAFDQVLQADPDSSPGWLGLARAQSGAGEQEQALISLEEFLFRHPD-EW- 129

Query: 191 TEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              ++Q       +++  A+    +      E N   A+            G    +   
Sbjct: 130 QGYLLQGTIQTSLQKYPDAVASYEKAL----ELNTTDALAWAGYGAALYGTGSYEDARDA 185

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +SL L  +   A     KSL     +  A   L     ++P
Sbjct: 186 CQQSLSLRPDLPSAHYWEGKSLFMLGDETGALSSLNHTVSIDP 228


>gi|21115529|gb|AAM43455.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575954|gb|AAY51364.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 952

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           K  +R RA L   R L+   +     +     E+LKL  +  +A+         Q +  +
Sbjct: 831 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 890

Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           A   LE   K++P        + + Y     +    + K       +  +   +    ++
Sbjct: 891 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 948

Query: 334 I 334
           +
Sbjct: 949 L 949


>gi|71279913|ref|YP_267075.1| TPR domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71145653|gb|AAZ26126.1| TPR domain protein [Colwellia psychrerythraea 34H]
          Length = 914

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/117 (10%), Positives = 44/117 (37%), Gaps = 2/117 (1%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            E   + A    + +++       A  +L +      +++ A  +A KAL+++P    + 
Sbjct: 779 LENDSDKAIAVYDDVVKKQPKNVVAHNNLAWLYLEQDNISKALEHAEKALELAPQIANIV 838

Query: 192 EAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           +   +  + + +   A+ + ++       K+ +     +    +    ++   + + 
Sbjct: 839 DTYAKVLLGSGDKRAALQYASKASEIAKGKDVDIQLNYVEALIANNRINEAKDLLAK 895



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 13/119 (10%)

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304
            +  +++KL    I A +  A S + +    KA  I EK W+   +P+ A+ +  L S  
Sbjct: 420 ENLQDAVKLNPELIEAELAIAFSALQRGDIAKANAIAEK-WQKQ-YPDKASSFNLLASIA 477

Query: 305 ------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                 +     LK++L LE+   ++  +L    +IA +  +I  +  +A   + IAP 
Sbjct: 478 IKEGKYDKAEQALKKSLSLEQ---DNFFALTEQLRIARKQENIPLSKQRADYLITIAPT 533


>gi|169779858|ref|XP_001824393.1| DnaJ and TPR domain protein [Aspergillus oryzae RIB40]
 gi|83773133|dbj|BAE63260.1| unnamed protein product [Aspergillus oryzae]
          Length = 523

 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 7/164 (4%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  LA      A    +  +    T    V           +G  + A 
Sbjct: 30  DTPLSSLIASAKTHLAGGSPRDALLYFDAAVSRDPTNYITVFQRG--AAYLSLGKNSQAS 87

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNR-NRAILLIAR 232
               + L + PD         +      +W  A+  L +  KK++ E+N    A    A 
Sbjct: 88  DDFDRVLQLKPDFESALLQRARLRANTADWEGALKDLEKAGKKSSLEYNEIQEARDAAAL 147

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +      GD  A  + A  ++     S+      A     +   
Sbjct: 148 AQNAEKHGDWEACVNQANVAVLKASASLSLRQTRAHCRFERGDV 191


>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 484

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 67/175 (38%), Gaps = 15/175 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD----ISPDA 187
               + A + L+ M+++    E   Y L  E  C+ G  + A +   K ++    + P +
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363

Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                P     +++      + S+A T + Q  K            L      ++ +G  
Sbjct: 364 TLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 419

Query: 243 IASYHDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +++      L+   +S  ++     +S + +N+   A+  L+ + + +  P+ A
Sbjct: 420 DSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 474


>gi|26248913|ref|NP_754953.1| hypothetical protein c3071 [Escherichia coli CFT073]
 gi|26109319|gb|AAN81521.1|AE016764_203 Hypothetical protein yphG [Escherichia coli CFT073]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|29826476|ref|NP_828782.1| hypothetical protein SAP1p33 [Streptomyces avermitilis MA-4680]
 gi|29611274|dbj|BAC75317.1| conserved hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 1000

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 32/125 (25%), Gaps = 8/125 (6%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A +   A  +    + +   + + L  L   Q+         A            T   
Sbjct: 843 GAGDREGAEALFRQAADR--GNTDVLCRL--AQVREGAGDREGAEALFRQAADRGNTDV- 897

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +Y L       GD   A+  A +A D       V   + Q    A +   A     Q  
Sbjct: 898 -LYRLAEMREEAGDREGAEALARQAAD--RGNTDVLCRLAQVREEAGDREGAEALFRQAA 954

Query: 216 KNAKE 220
                
Sbjct: 955 DRGST 959



 Score = 39.9 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 23/293 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A +   A  +    + +   + + L  L    +   +     A   L        T    
Sbjct: 684 AGDREGAEALARQAADR--GNTDVLCRL--ADMRERDGDREGAEAVLRQAADRGNTDV-- 737

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +Y L     R GD   A+    +A D        T A+ +  ++   W  A      +  
Sbjct: 738 LYRLADMRERDGDREGAEALFRQAADRG-----STTALFRLAMM---WEGAGDREGAEAV 789

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             +  +R    +L   +    + GD   +   A ++    +  +   +C    +      
Sbjct: 790 LRQAADRGNTHVLYRLADMREEAGDREGAEALARQAADRGNTDV---LCRLAQVREGAGD 846

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI--VSKI 334
           R+    L +      + ++      +  E    + + A  L     +   + V+  ++++
Sbjct: 847 REGAEALFRQAADRGNTDVLCRLAQVR-EGAGDR-EGAEALFRQAADRGNTDVLYRLAEM 904

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
             E G  + A A A  A        +  L AQ+ +  + + +      + A  
Sbjct: 905 REEAGDREGAEALARQAADRGNTDVLCRL-AQV-REEAGDREGAEALFRQAAD 955



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 73/285 (25%), Gaps = 20/285 (7%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            A     L    H             L  L    +         A   L       +T  
Sbjct: 584 AAEGRHRLQWAHHLRHRAATHGSTTALFRL--AMMRERAGDREGAEALLRQAADRGST-- 639

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+  L     R GD   A+  A +A D           +      A +   A     Q 
Sbjct: 640 TALSGLADMRERAGDREGAEALARQAAD--RGNTDALYRLADMRERAGDREGAEALARQA 697

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                  +R    +L   +      GD   +     ++    +  +      A       
Sbjct: 698 ------ADRGNTDVLCRLADMRERDGDREGAEAVLRQAADRGNTDV--LYRLADMRERDG 749

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI--VS 332
            +  AE +  +         +      ++ E    + + A  +     +   + V+  ++
Sbjct: 750 DREGAEALFRQAADRGSTTALFR--LAMMWEGAGDR-EGAEAVLRQAADRGNTHVLYRLA 806

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +  E G  + A A A  A        +  L AQ+ +        
Sbjct: 807 DMREEAGDREGAEALARQAADRGNTDVLCRL-AQVREGAGDREGA 850


>gi|324504302|gb|ADY41858.1| DnaJ subfamily C member 3 [Ascaris suum]
          Length = 503

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 21/171 (12%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GDL  A+     AL   P    V E +     + +    A   L+ +      +   
Sbjct: 122 LKQGDLTKAEADYKAALKADPSNGEVAEKLKAIEQIRQFTRDADGLLHSRDYTGAAYYYT 181

Query: 225 RAI--------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +AI        L   R+      G++  +  D     KL  +S  A +  +K        
Sbjct: 182 KAIEYCQWDARLHENRAKCYEHTGEVQKAIADYRSVSKLVPDSTEAFLTISKLYYGIGDA 241

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
            ++   + +  K+NP H E    Y            KR  +L ++ +   E
Sbjct: 242 EESLSQIRECLKLNPDHKECFAFY------------KRVKKLVKMRESLSE 280


>gi|319410233|emb|CBY90573.1| conserved hypothetical TPR-containing periplasmic protein
           [Neisseria meningitidis WUE 2594]
          Length = 612

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 103/309 (33%), Gaps = 51/309 (16%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            P      +       VL +  ++ +  L +    A E    R  LL+A++    D    
Sbjct: 129 EPIPGEAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLLAQAAVQQDGLAQ 188

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------------- 288
            AS      +LK     +  +  A      Q +++ KA   L+++ K             
Sbjct: 189 KASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILPPTLMTL 246

Query: 289 ---VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEINKESVE 326
                 +PEI + +                 +++  ++ +L     R   L E N  +  
Sbjct: 247 RLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLERNPNAD- 305

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHNTDKILY 380
              +  + A+   +  +  +      + A       ++    + A +  A+  +  K+  
Sbjct: 306 ---LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRDYTKVRQ 362

Query: 381 WTQSALHAM 389
           W +  + A 
Sbjct: 363 WLKK-VSAP 370


>gi|294670789|ref|ZP_06735645.1| hypothetical protein NEIELOOT_02492 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307276|gb|EFE48519.1| hypothetical protein NEIELOOT_02492 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 330

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 21/168 (12%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  ++AL +    +A      ML      E A  +    +  +G    A+    + + +
Sbjct: 73  LLGAELALHKGDPGLALATYMAMLDRTRDSEVAERA-MDMAVNLGAYEYAEAVYQRWIKL 131

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P          W+ + V        E+  A    +   + A E  R+R  LL+A+    
Sbjct: 132 EPTPGPALKRISWMRDMV------RGEYGDARNGFDAALEGANEEQRSRIFLLVAQ---- 181

Query: 237 ADKGDMIASYHDAIESLKLCDNSI--MASICAAKSLISQNKKRKAEVI 282
               +   +        K   +      ++ A   L + N  + A+ +
Sbjct: 182 IAAQNPAVAQLMDDTVHKRAKSYPELPEAVIADAILSALND-KAADSV 228


>gi|187736127|ref|YP_001878239.1| type II and III secretion system protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187426179|gb|ACD05458.1| type II and III secretion system protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 833

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 22/193 (11%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--------------NSIMASIC 265
           E     ++LL+ ++ +   +G    +  +   SL                  +   AS+ 
Sbjct: 38  EEQAQASMLLLGQARQQYSEGKYQEALDNYRRSLTALPKSPNMEKRRRFLETSIADASVA 97

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            A+  I   +  +A  +LE   K  P   +A     +        ++    L   + ++V
Sbjct: 98  VAQEYIKAGRYDEAVKLLEDALKSTPDHALARRTLEI----ARDPVRTNPALSPEHVKNV 153

Query: 326 E--SLVI-VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYW 381
           E  + ++ ++    E+G  D A  +    +K  P        +  + +A +         
Sbjct: 154 EEVNRLLHLAFGYYELGQYDAALKEFTSVLKTDPYNTAARRGMELVNRARTAYFSAARDE 213

Query: 382 TQSALHAMPDPLW 394
           T+S+  A     W
Sbjct: 214 TRSSALADVSRQW 226


>gi|108757835|ref|YP_634543.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108461715|gb|ABF86900.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 3182

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 9/186 (4%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAV 157
            +A K    +      H   L  L   + +   R    A         + + PA    A 
Sbjct: 373 QVAVKALHELLGLKPDHLPSLKAL--ARASDQARDRAGAVRAYRRLAALARDPAEAADAH 430

Query: 158 YSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             L    +    D+  A+ +   AL ++PD P     + +      E  RA+  L++ ++
Sbjct: 431 VHLARLCAQTEDDIAGARLHCEAALRLAPDHPDALLLLGELCHRGGEHLRALKALDRLRE 490

Query: 217 NAKEWNRNRAILLI-ARSLENADKG--DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            A   +    +      +    D+G      +     E++ L          AA+     
Sbjct: 491 VAMGRHELDRVGHADLMAGRVWDEGLKQPENALLRFREAVSLLPGEPEPLFAAARVAEGL 550

Query: 274 NKKRKA 279
            + ++A
Sbjct: 551 GRLQEA 556


>gi|115481532|ref|NP_001064359.1| Os10g0328700 [Oryza sativa Japonica Group]
 gi|20303634|gb|AAM19061.1|AC099774_23 putative crooked neck protein [Oryza sativa Japonica Group]
 gi|31431188|gb|AAP53003.1| Crooked neck protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113638968|dbj|BAF26273.1| Os10g0328700 [Oryza sativa Japonica Group]
 gi|215687247|dbj|BAG91812.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 711

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 87/278 (31%), Gaps = 34/278 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMML--QIPATREFAVY-SLY 161
           H+         N+    LL       E   + + A    +  L  + P  R   +   L 
Sbjct: 250 HAGSLLAAAGDNDDTAVLLAAFADFEERCGEPDRARAIYQHALRGEPPEPRAEELREKLL 309

Query: 162 FESCRIGDL--------NSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFL 211
               R GD            +    +A+  +P     W     +++     + +R     
Sbjct: 310 SLEKRFGDRHGVEDSIVTKRRSQYERAVTTNPLCYDAWFDLIRLEESANTGDANRIRDLY 369

Query: 212 NQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----N 258
            +              + W R   + +     E  D  D+  +     E L+       +
Sbjct: 370 RRAVANVPPAAAAAEKRHWRRYIYLWINYALFEELDAEDVARARGVYRECLRTIPHKKFS 429

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
                + AA+  I       A  +L     V P P+++  Y  +  E  +G + R   L 
Sbjct: 430 FSNICVMAAELEIRDKNLAAARRLLGNAIGVAPRPKLSRRYIEI--ELQLGNVGRCRILS 487

Query: 319 EINKESV--ESLVIVSKIALE--MGSIDQAHAKAMLAM 352
           +   E     S V  S  ALE  +G  D+A +   LA+
Sbjct: 488 QKFIEHAPSSSHVWRSYAALEKKLGETDRARSVYDLAV 525


>gi|190576474|ref|YP_001974319.1| putative polysaccharide deacetylase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190014396|emb|CAQ48044.1| putative polysaccharide deacetylase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 890

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +R RA     R L+   +     +     E+LKL  +   A+         Q + 
Sbjct: 767 AGPASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRPDFAQAANNLGFVYYRQQRY 826

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL 302
            +A   LE   K++P    A  Y +L
Sbjct: 827 AEAARWLENTLKIDPSR--AVAYLNL 850


>gi|218780012|ref|YP_002431330.1| hypothetical protein Dalk_2169 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761396|gb|ACL03862.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 798

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 73/233 (31%), Gaps = 22/233 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                           +   P +   A+ +L     + G L  A  Y  K+L  +P +  
Sbjct: 506 YEMGNIEEAVQGYYRALTYKPDSD-LALNNLGLIMAKNGKLQEAVEYYEKSLAANPQSAE 564

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDMIASYHD 248
               +    V      +A  F  Q      +  R  A +  +  +L    +G    +   
Sbjct: 565 TMANMGDAQVALGNLEKAKGFYTQALSVDTDSFRVHASMGKLLINLGEFQQGLDQFAAAL 624

Query: 249 AI--ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE 305
           AI  +  +  ++     + A + L    +       LE   +  P  P  AN +      
Sbjct: 625 AIDHQDQETQNDL----LLALRILNEIER-------LEDAIQTQPNQP--ANYFALAKLL 671

Query: 306 NTVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               K  RA +L     E        L  ++K+ ++ G  D+A    +   ++
Sbjct: 672 GRYNKTDRAEQLCLQGLEKAPSDPNGLNQLAKVRMDQGRYDEAEKLLLETARV 724


>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
           MBIC11017]
          Length = 810

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 95/309 (30%), Gaps = 13/309 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G  +  + N   A +      +    + E  + L   +      +Y  A  + + +L+  
Sbjct: 348 GQQAAQSGNWQSATENFEQALELKADYTEAALKL--GETYAEIGKYPEAIAQFDTLLKQQ 405

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A           G   +A     +AL + P             V   ++  AI  
Sbjct: 406 PKTAAAFRERGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAI-- 463

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                + A     N+A   +        +G + A+  +  ++++   N + A +      
Sbjct: 464 --ADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYR 521

Query: 271 ISQNKKRKAEVILEKIWK--VNPHPEIA-NIYTHLLSENTVGKLKRALRLEEINKESVES 327
                   AE   EK  K  V    + A   Y     +     +    +   IN +   +
Sbjct: 522 SVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQALTINPQLTRA 581

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ--ANSHNTDKILYWTQS 384
              +  +  E G I+QA      A++I P     +LL  ++        + +  L     
Sbjct: 582 HTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQQADFEGALQDYDR 641

Query: 385 ALHA-MPDP 392
           A+     DP
Sbjct: 642 AIAINPKDP 650


>gi|26991366|ref|NP_746791.1| hypothetical protein PP_4682 [Pseudomonas putida KT2440]
 gi|24986431|gb|AAN70255.1|AE016665_8 lipoprotein, putative [Pseudomonas putida KT2440]
          Length = 266

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 4/106 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
               +S         L  L   Q       +N A   LE   +I       +Y L     
Sbjct: 150 AAGGLSADEQLDGPVLALLTTAQTQQGSGDFNGAASSLERAQRIAPREPQVLYRLAQVRL 209

Query: 166 RIGDLNSAQRYATKALDIS---PDA-PWVTEAVVQQYVLAKEWSRA 207
             GD   A++ A +AL  +   P     +   + Q      + + A
Sbjct: 210 SQGDAAQAEQLARRALTYANGRPSLQAELWNTIAQAREKQGDSAGA 255


>gi|85710694|ref|ZP_01041758.1| hypothetical protein NAP1_09792 [Erythrobacter sp. NAP1]
 gi|85687872|gb|EAQ27877.1| hypothetical protein NAP1_09792 [Erythrobacter sp. NAP1]
          Length = 665

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 66/209 (31%), Gaps = 13/209 (6%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
           Y KG+ AL  G + +    +  A     Y   +     +               Q  +A 
Sbjct: 438 YAKGHLAL--GYV-LNFGRMDRAGAYPHYKRAEELAPGDADTMRSVATFYSFGNQRALAM 494

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           + +E ++++      A  S  F +   G  + A  Y  KAL+++P       A+    + 
Sbjct: 495 QMIERVVELDPLNALAFRSAGFVALFAGAFDQAIAYMEKALELNPSLANSFYAIGAAKLA 554

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   A      +  +           L   ++     GD   +     + +    +S 
Sbjct: 555 LGDDVGARDAFEAEAID--------LFALPGLAIARRRLGDEAGASEAFSKLVSDYGDS- 605

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKV 289
                 A+ L    +  +A  +L + +  
Sbjct: 606 -GLYQQAQVLAQWGESERALAVLTRAFDK 633


>gi|332704145|ref|ZP_08424233.1| tetratricopeptide domain-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332554294|gb|EGJ51338.1| tetratricopeptide domain-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 379

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 22/239 (9%)

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               +  A+Y L  +  R G ++ A+    +A  +      +   + +      ++ +A 
Sbjct: 85  DKEFKIKALYELGRDYKRAGFVDRARAALEEAQALGGRNKLILSELARLAADGGDYEQA- 143

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L  +  + +      A  L+  + E  DKG          ++L++   S+ A +    
Sbjct: 144 ATLYSQLDHPQA----EAHYLVQFARELFDKGVEAQGKKTLKKALRVYPGSLEAWLVQLT 199

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGKLKRALRLEEINKESVES 327
                  K +    L      +  PE++  ++  LLS  T G+L  +     ++    E+
Sbjct: 200 REYDAGDKDRLRKTLSDA-LAHVRPELSFILFEGLLSHATKGRLPDSANARTVSLSQTET 258

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
            ++V+ +       +       + +         L+LA      +    +   W + AL
Sbjct: 259 ELLVAVLN------ELESRHGEILLHYY----GALILA-----LNGRPQEASTWLERAL 302


>gi|332278297|ref|ZP_08390710.1| tetratricopeptide repeat protein [Shigella sp. D9]
 gi|332100649|gb|EGJ03995.1| tetratricopeptide repeat protein [Shigella sp. D9]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 663


>gi|225682800|gb|EEH21084.1| pre-mRNA-splicing factor clf1 [Paracoccidioides brasiliensis Pb03]
          Length = 677

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 76/240 (31%), Gaps = 26/240 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185
             A    +  + ++P  +  A++  Y    +  GD              +Y  + +  +P
Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKENP 318

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239
               +    V+    + +  R      +              R    L I  +L E  + 
Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378

Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            DM  ++    E +KL            +  A+  I Q   + A   L       P  ++
Sbjct: 379 KDMERAHQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              Y  L     E    + K   +  E +  + ++ +  +++   +  ID+A A   L +
Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497


>gi|198475784|ref|XP_001357159.2| GA19838 [Drosophila pseudoobscura pseudoobscura]
 gi|198137958|gb|EAL34226.2| GA19838 [Drosophila pseudoobscura pseudoobscura]
          Length = 586

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +  RA   + R+           +  D   + KL  +S       A+ L+  +    A  
Sbjct: 330 DTIRAYAYMKRASLYMQVNKRDEALADFDAAEKLKPDSPDVYHQRAQILLLLDSINPALE 389

Query: 282 ILEKIWKVNPHPEIA---NIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIV 331
             EK  ++ P+  IA     YT           +     +++  +  +   + VE   ++
Sbjct: 390 QFEKAVRLAPNHAIAYVQKCYTKYRLALMTNNQQGLESVVRQLEQAIDQFPKCVECYSML 449

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +++  +  + DQA      AMK+AP      
Sbjct: 450 AQVMADQQNFDQAQQYYDKAMKLAPTNAALF 480


>gi|195123558|ref|XP_002006272.1| GI18655 [Drosophila mojavensis]
 gi|193911340|gb|EDW10207.1| GI18655 [Drosophila mojavensis]
          Length = 662

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---D 241
           P +    + +  + +   +   AI   +       +      +L + R+     +G   D
Sbjct: 366 PTSIERHKKLGNEQLENGKLLAAIDTYSAALAEYPQGE----VLYLNRATALMRRGWFGD 421

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           + A+  D  E+L+L  + + A    A++L+  ++  +A+  L++
Sbjct: 422 IYAALRDCHEALRLDPSYVKAHFRLARALLELHRPHEADKCLQE 465


>gi|67642936|ref|ZP_00441687.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
 gi|121599439|ref|YP_993899.1| TPR domain-containing protein [Burkholderia mallei SAVP1]
 gi|124386425|ref|YP_001026959.1| TPR domain-containing protein [Burkholderia mallei NCTC 10229]
 gi|126451387|ref|YP_001079753.1| TPR repeat-containing protein [Burkholderia mallei NCTC 10247]
 gi|166999704|ref|ZP_02265538.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
 gi|254177047|ref|ZP_04883704.1| TPR domain protein [Burkholderia mallei ATCC 10399]
 gi|254208928|ref|ZP_04915276.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
 gi|254360018|ref|ZP_04976288.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
 gi|121228249|gb|ABM50767.1| TPR domain protein [Burkholderia mallei SAVP1]
 gi|124294445|gb|ABN03714.1| TPR domain protein [Burkholderia mallei NCTC 10229]
 gi|126244257|gb|ABO07350.1| tetratricopeptide repeat protein [Burkholderia mallei NCTC 10247]
 gi|147750804|gb|EDK57873.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
 gi|148029258|gb|EDK87163.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
 gi|160698088|gb|EDP88058.1| TPR domain protein [Burkholderia mallei ATCC 10399]
 gi|238524157|gb|EEP87592.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
 gi|243064201|gb|EES46387.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
          Length = 614

 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 4/192 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G  + A     +AL++ P        +        +   AI           
Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+         + H    +L L     +A    A +L ++ + R A
Sbjct: 203 HF--VAAHFNLGNALDAI--SQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258

Query: 280 EVILEKIWKVNP 291
               E+   ++P
Sbjct: 259 LPHYERAVGLDP 270


>gi|281179597|dbj|BAI55927.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|253996237|ref|YP_003048301.1| type IV pilus biogenesis/stability protein PilW [Methylotenera
           mobilis JLW8]
 gi|253982916|gb|ACT47774.1| type IV pilus biogenesis/stability protein PilW [Methylotenera
           mobilis JLW8]
          Length = 270

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 4/203 (1%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            L +R   +A ++  +  +I  +   A   L      +G    A+    +A+ I P+   
Sbjct: 66  YLQQRNLEVALDEFTIATKIDPSSAMAYNGLGMVHSALGQDALAEASFKQAVQIEPNNSE 125

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                            +I       KN        AI      + +  K D+  +    
Sbjct: 126 SHNNFGNFLCSRGRVDESIKEFMAAVKNPLYAT--PAIAYTNAGVCSLRKQDVRNAEVYF 183

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENT 307
             +L+L      A+   A    ++N    A   L+      P PE+  +   +     N 
Sbjct: 184 QRALQLEPLLHSAAYQLALIQFNRNDVANARNTLQNAMLSRPGPELLWLSVRVARLLGNH 243

Query: 308 VGKLKRALRLEEINKESVESLVI 330
             +   AL L     +S ++ ++
Sbjct: 244 DDESSYALELRRQYPDSEQAKLL 266


>gi|218438596|ref|YP_002376925.1| hypothetical protein PCC7424_1618 [Cyanothece sp. PCC 7424]
 gi|218171324|gb|ACK70057.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 217

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 7/180 (3%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E L+  L  Q A   + Y  A       +++      A Y+L       G L  A+    
Sbjct: 37  EELIQ-LGNQAAK-SKNYAQAERLFYNAVKLYPNYPAAYYNLAKALYDQGKLEEAETNYR 94

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +A+ ++P+       +        +   AI    +       +N   ++          +
Sbjct: 95  RAILLNPEYAEAYNNLGSVLSDQGKLEEAIINFERAI----HFNPQYSLAYNNLGTALHE 150

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297
           +G +  +      +++L D + +A       L  Q K ++A+   +K   +NP+ P+ A 
Sbjct: 151 QGHLEEAQMQYQTAIELDDTNALAYYNLGLVLRDQGKTQEAKANFDKALSINPNLPDPAQ 210


>gi|158520339|ref|YP_001528209.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158509165|gb|ABW66132.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 401

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 58/189 (30%), Gaps = 17/189 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            + Y+ A       L+       A Y L       G+L+ +     KAL+++P  P    
Sbjct: 33  TKDYDGAIADFTAYLEQKPDSFQATYMLGRAYLEKGELDKSVATLKKALEMNPGDPEAIL 92

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +   YV   ++  AI        + ++ +R      + + +             +A+ S
Sbjct: 93  FLGVAYVAKADYENAIATFE----SFEDPSRPLLEKAVGKQITLLKIDYNKKLAKEAVAS 148

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI----YTHLLSENTV 308
            K            A          K     +K         +A +     +H+ S   V
Sbjct: 149 EKKLATVKPPVETYAVFYYEDKTPGKNMAAFQKA--------LAAMTISNLSHINSIQVV 200

Query: 309 GKLKRALRL 317
            +L R   L
Sbjct: 201 ERL-RLQAL 208


>gi|78064817|ref|YP_367586.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77965562|gb|ABB06942.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 828

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 69/189 (36%), Gaps = 14/189 (7%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           ++A  Y  +A+ + P      + + +    A +   A+       +   +     A  ++
Sbjct: 191 DAADAY-RRAIALQPGFRVAHQGLSETLRAAGDLRGAVD----HAREGLDPGDADAHCVL 245

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           AR L+   + D   +      ++ +      A          Q +  +A        +++
Sbjct: 246 ARLLQRMSEFD--KAVELLERAIAIDPAHARAWAWLGDLRNQQGEYGQAVQACRHAIELD 303

Query: 291 PHPEIANIYTHLL-SENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAH 345
             PE+A+ Y  L  + + + +L  A         +N +  ++   ++   L +  +D+A 
Sbjct: 304 --PELADAYNFLGFAYHNLNRLAAAELSYRHAIDLNPDDADAHQNLAAALLRLEKLDEAL 361

Query: 346 AKAMLAMKI 354
               +A ++
Sbjct: 362 KHTEIAREL 370



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 66/257 (25%), Gaps = 54/257 (21%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDIS 184
             + + A             R   +   Y E+            +  +A     +A+++ 
Sbjct: 84  SGRLDDAIAHYR--------RAVGLRPDYPEAHNNLGNALRDAREPTAAMESCARAIELR 135

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P        +        E   A     +   +  ++    A   +  +L   +K D   
Sbjct: 136 PGYAEAYNNLGNALQDLGEHEAAAASYAKAVAHQPQY--ADAYCNLGNALNAQEKFD--D 191

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +      ++ L     +A    +++L +    R A                         
Sbjct: 192 AADAYRRAIALQPGFRVAHQGLSETLRAAGDLRGAVD----------------------- 228

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
                        E ++    ++  +++++   M   D+A      A+ I P     +  
Sbjct: 229 ----------HAREGLDPGDADAHCVLARLLQRMSEFDKAVELLERAIAIDPAHARAWAW 278

Query: 364 LAQIEQANSHNTDKILY 380
           L  +          +  
Sbjct: 279 LGDLRNQQGEYGQAVQA 295


>gi|332841590|ref|XP_509717.3| PREDICTED: transmembrane and TPR repeat-containing protein 4 [Pan
           troglodytes]
          Length = 590

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 309 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 364

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 365 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 417


>gi|262198154|ref|YP_003269363.1| hypothetical protein Hoch_4981 [Haliangium ochraceum DSM 14365]
 gi|262081501|gb|ACY17470.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 384

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 83/262 (31%), Gaps = 16/262 (6%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  +  +A + Y  A   L  +L +  T   A       +    D  S      KA+++ 
Sbjct: 98  LLAEAQMAAKDYEGARSTLSQLLGLDETDAAAYAKRGEAAIAQKDYESGLEDIRKAMELE 157

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P        + +      +   A   L    +    +      LL+  +L+    G +  
Sbjct: 158 PQNLEYRVTLGKGLQETGQNGEAAEVLAAVVEENPAYLDG---LLVYGALQR-SAGKLQD 213

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +      +++    S +A      +      +  A   L++  ++    + ++     + 
Sbjct: 214 ARELHQRAVETSPESALAHYELGITQFYMGDRDDALSSLQQATEL----DASDAQIRYVH 269

Query: 305 ENTVGKLKRALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356
              +  + R     E         K+  ++   +  +  ++   D+A       ++  P 
Sbjct: 270 GELLRNMGRFEEAAERYRDALDRQKDHDKAAAKLGLMLTKLERFDEAAEVLSARVEREPQ 329

Query: 357 RKEIFLLLAQIEQANSHNTDKI 378
             +  L L Q+ ++     + +
Sbjct: 330 DADALLYLGQLHESQEQFAEAV 351



 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 35/227 (15%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT------------- 209
           E+   G   +A+ +  +A ++ P+     E  V   +       A+              
Sbjct: 34  EARDSGQAAAAEGHYERARELRPEHYETAERYVGFLIAEGRADDAVAEAQEYLEQAIGEL 93

Query: 210 ----FLNQKKKNAKEWNRNRAILLIARSLENADKG-------------DMIASYHDAIES 252
                L + +  AK++   R+ L     L+  D               D  +   D  ++
Sbjct: 94  KGYHLLAEAQMAAKDYEGARSTLSQLLGLDETDAAAYAKRGEAAIAQKDYESGLEDIRKA 153

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           ++L   ++   +   K L    +  +A  +L  + + NP   +  +  +   + + GKL+
Sbjct: 154 MELEPQNLEYRVTLGKGLQETGQNGEAAEVLAAVVEENPA-YLDGLLVYGALQRSAGKLQ 212

Query: 313 RALRLEEINKE-SVESLVIVSKIALE---MGSIDQAHAKAMLAMKIA 355
            A  L +   E S ES +   ++ +    MG  D A +    A ++ 
Sbjct: 213 DARELHQRAVETSPESALAHYELGITQFYMGDRDDALSSLQQATELD 259


>gi|170696868|ref|ZP_02887964.1| serine/threonine protein kinase [Burkholderia ambifaria IOP40-10]
 gi|170138042|gb|EDT06274.1| serine/threonine protein kinase [Burkholderia ambifaria IOP40-10]
          Length = 1349

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 6/162 (3%)

Query: 101  PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAV 157
             +AR+     +         +  L   +        + A      +L++      R    
Sbjct: 1164 AMAREAVYCATCLDHLPTLGVTMLYLARTYQLAGDRDAARSLSAALLRLSEAHRLRAVGH 1223

Query: 158  YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y+    +    D      +  A +         +    + +      ++  A+  + Q  
Sbjct: 1224 YAAIIHAWTQEDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAGRGDYDAALAQIRQCL 1283

Query: 216  K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                    R     L+ +  E   + D       A+++ +  
Sbjct: 1284 AWCESTGERYYEAQLLLKQCEYLRRADPRCGGVAALDACRRA 1325


>gi|167527386|ref|XP_001748025.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773443|gb|EDQ87082.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1173

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 48/172 (27%), Gaps = 18/172 (10%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A +    ++         L  LL+        +   A +  E +L    T   A  +
Sbjct: 52  AEHAYRCALAINPSLYSVRNDLGNLLKA-----TGKNAEARQCYEQVLYYQPTFAVAWNN 106

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-- 217
           L            A +  TKA+ +      V   ++         + A+  +    ++  
Sbjct: 107 LGCIELDEQQPQHALQRFTKAVYLDSQLECVYSNLLSILGAEST-AAALGNVANVLRDEG 165

Query: 218 -----AKEWNRN-----RAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                   + R+      A +    +        +  +     E++KL  + 
Sbjct: 166 QLLAAQHVYKRSLGLSPSAHVHAGLAALFHRSQQLPEAARHYQEAIKLNPSF 217


>gi|134295461|ref|YP_001119196.1| cellulose synthase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134138618|gb|ABO54361.1| cellulose synthase operon C domain protein [Burkholderia
           vietnamiensis G4]
          Length = 1307

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 19/220 (8%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM--L 147
            GL ++A  ++  A  + +  ++      + L  L  +++         A          
Sbjct: 306 RGLQALARGDLAGADPLLARAARARPDDADALGGLGLLRLREGRHDEARALFARAAALAT 365

Query: 148 QIPATREFAV------YSLYFE---SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
                +   +      + L  +   +   G    A+R A  AL + PD+P     +    
Sbjct: 366 TDQRGKWQGLARTAQFWGLLAQGRAAASAGRPQDAERSARAALAMQPDSPDAKLQLADAL 425

Query: 199 VLAKEWSRAITFLNQ--KKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESL 253
           +  ++W+RA   L +    ++          LL     R+       D + S     +  
Sbjct: 426 LAQRDWARAEPLLRELLAVRSPSVSVVRDTALLYQNTGRAERIGPLLDALQSRVTGSDDR 485

Query: 254 KLCDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNP 291
           +  D    A + A  A++L  + ++  A    E   +  P
Sbjct: 486 RALDGLR-ADLLATEARALADKGERGPAAQRYEAAVRAAP 524


>gi|186686296|ref|YP_001869492.1| hypothetical protein Npun_R6265 [Nostoc punctiforme PCC 73102]
 gi|186468748|gb|ACC84549.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 226

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 35/130 (26%), Gaps = 4/130 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L +      +     A E L  +++      F  + L     R      A     +A+ +
Sbjct: 70  LQQANALFNQGDLTGAEENLRKLIKKFPDDAFGHFQLGNVLFRQKKPEEAISAYQEAIRL 129

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                    A+   Y     W  A+T   +  +    +       L   +L         
Sbjct: 130 QSKYALAYNAIGMVYASQSRWDEAMTEYKKALEINPNYGE----ALTNFALVLWQTNKKD 185

Query: 244 ASYHDAIESL 253
            +     ++L
Sbjct: 186 EALSSLEKAL 195


>gi|296135516|ref|YP_003642758.1| tetratricopeptide repeat protein [Thiomonas intermedia K12]
 gi|295795638|gb|ADG30428.1| tetratricopeptide repeat protein [Thiomonas intermedia K12]
          Length = 390

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 38/197 (19%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
                A ++H  +  +     E      L   Q        + A    E + +       
Sbjct: 87  GEYERAVRVHQNLLARADLPREARERAQLALAQDFFKAGLLDRAESAYEDLRRS------ 140

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQK 214
                               YA++AL           A++Q     ++W++AI      +
Sbjct: 141 -------------------VYASQAL----------TALLQISERTQDWNKAIARAAELE 171

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +    + R  A      ++++   G    +      +L+     +   +  A+      
Sbjct: 172 LRATGAYQRQIAQYWCELAVQHHAAGRAQEAQQSLDAALQAAPQGVRPRLLRAQWAQQHG 231

Query: 275 KKRKAEVILEKIWKVNP 291
           +   A  +LE I  V P
Sbjct: 232 ELESALHMLESIDLVQP 248


>gi|238506132|ref|XP_002384268.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357]
 gi|220690382|gb|EED46732.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357]
          Length = 533

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 7/164 (4%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  LA      A    +  +    T    V           +G  + A 
Sbjct: 30  DTPLSSLIASAKTHLAGGSPRDALLYFDAAVSRDPTNYITVFQRG--AAYLSLGKNSQAS 87

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNR-NRAILLIAR 232
               + L + PD         +      +W  A+  L +  KK++ E+N    A    A 
Sbjct: 88  DDFDRVLQLKPDFESALLQRARLRANTADWEGALKDLEKAGKKSSLEYNEIQEARDAAAL 147

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +      GD  A  + A  ++     S+      A     +   
Sbjct: 148 AQNAEKHGDWEACVNQANVAVLKASASLSLRQTRAHCRFERGDV 191


>gi|304321651|ref|YP_003855294.1| TPR domain protein [Parvularcula bermudensis HTCC2503]
 gi|303300553|gb|ADM10152.1| TPR domain protein [Parvularcula bermudensis HTCC2503]
          Length = 854

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            ++  +   A      A   ++ ++        A+      + R GD  +A R A     
Sbjct: 162 KMIAARAHYALGDLLAARSAIDTIIGGDGESMTALLFKAQIALRSGDYGAALRLARGIDA 221

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIARSLENADKG 240
           I P         V+  +   + + A T +        +  R      LL+A   +     
Sbjct: 222 IDPGNVTAGVIAVEALLRIGDEATAQTTITDLAAANPDDPRPTYLKALLLAEQGQMKQAA 281

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           D ++S    +E  +        ++  A+  +++ +  +AE +L    +       A    
Sbjct: 282 DTVSSIEPWLERREG------GAVFLARLKLAEQRPAQAEQLLRARLREQATDIAARQLL 335

Query: 301 HLLSENTVGKLKRALRLEE---INKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             + +    + + A  LE            L + +   ++ G ID A A     
Sbjct: 336 VSILDERGEEAEAARVLERGLAFAPRHPVLLRLKADRLIDAGEIDAAAAVLAPL 389


>gi|193212228|ref|YP_001998181.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
 gi|193085705|gb|ACF10981.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB
           8327]
          Length = 561

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 47/167 (28%), Gaps = 8/167 (4%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIG 168
           +      +    +L    +A     YN + E       LQ        +  L  E     
Sbjct: 91  AAVKLAPSNPHYHLYLADLAQDMHDYNRSAELYGQAFDLQPDKPELLYLQGL--ELMSAN 148

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
               A R   KA+ + P        ++Q  +  K +  AI   N+  +      + R IL
Sbjct: 149 QPEPAIRVFEKAVSLDPYNDNALSQILQLQIRLKRFPEAIETCNKMLEIDGSNLKLRLIL 208

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               +  N        +     E ++     +          IS  +
Sbjct: 209 AELYAKNN----QAARAVATLKEVIQTDPGYVPGWSALFDFYISAGR 251



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 113/323 (34%), Gaps = 24/323 (7%)

Query: 84  GYKALYTGLMSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           G+ AL+   +S   + +     +         +   + L  L  V+    E QY     +
Sbjct: 238 GWSALFDFYISAGRSADFRRELRAFLDSKAASSEKIDDLARLFIVRSGKQE-QYEAPTRE 296

Query: 143 L--EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTEAVVQQY 198
              E++   P  ++ F +  L+     I D   A +   +KA++++       EA++  +
Sbjct: 297 FLDELIAVRPRESKLFVLKGLF---EMIHDRQRAGQLCFSKAVELNSSNAEAWEALISAH 353

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-- 256
           +   E ++A   L +K   A      R  LL    L     G+   +     +++++   
Sbjct: 354 ISMNEKTQAYALL-RKANAALPGEGLRWKLLEGSLL--LQAGEPKKAATVLQQAVRMKMT 410

Query: 257 ----DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSE-NTV 308
                  I A I  A +      K ++      + +++ H  +A     Y          
Sbjct: 411 DDDLPLLIRAHISLALAYDGLGMKNRSRQAYTTVLRLDAHNSLAMNNLAYLLAEEGIKLR 470

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQI 367
             L  A     +  ++   L  +  +  ++G  D+A      A++    + E++L L + 
Sbjct: 471 DALLLATNAVLLEPDNGVYLDTLGWVNYKLGEYDRARILLEKAIETGIEEPEVYLHLGEA 530

Query: 368 EQANSHNTDKILYWTQSALHAMP 390
            +    +  K     + A  A  
Sbjct: 531 YRK-LGDEPKAKEMFEKAKAASR 552


>gi|182414971|ref|YP_001820037.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177842185|gb|ACB76437.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 744

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 9/170 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQ--QHTFHNEYLV---YLLEVQIALAERQYNIAHEKLEMMLQ 148
            +A  +   A +  +   +  +     E       L   ++   + +   A   L  +L 
Sbjct: 558 HLALGDAQRALERTADAERSYREALRLEPAALDGRLRLAELLAEQGRDAEAAPLLREVLA 617

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             A    A Y +     R GD         +A+ + PD P     +      A + + A+
Sbjct: 618 RDAGSADAHYQIGRLGLRAGDTAMGVHALREAVRLRPDWPAARLTLGNALARAGDMTGAV 677

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                           R  L    +      G +  +  +   +L+   +
Sbjct: 678 EEFRAALALRPNDLGARNNL----ANALLASGRVAEAIREYETALQQQPD 723



 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAIL 228
              A  Y   AL + PDA  + E +             A+       +     +  RA  
Sbjct: 434 RAEAIGYFEMALRLKPDAAELHEGLGYLLARDSATQAPALEHAEAALR----LDSARASA 489

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R +     G++ A+      +LKL      A+     +L++  +  +A  +LE+  +
Sbjct: 490 HNLRGMLLVRAGEIDAAIGAFQRALKLEPKLAAAAANLGSALLAAGRPAEAVPVLERAVE 549

Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             P     H  + +    L       +  R   L  +   +++  + ++++  E G   +
Sbjct: 550 FAPTLAAAHLALGDAQRALERTADAERSYR-EAL-RLEPAALDGRLRLAELLAEQGRDAE 607

Query: 344 AHAKAMLAMKIA 355
           A       +   
Sbjct: 608 AAPLLREVLARD 619



 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/261 (10%), Positives = 71/261 (27%), Gaps = 7/261 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A  +    +           + L   + +   + + A    +  L++      A  +
Sbjct: 467 ATQAPALEHAEAALRLDSARASAHNLRGMLLVRAGEIDAAIGAFQRALKLEPKLAAAAAN 526

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G    A     +A++ +P       A+       +  + A     +  +   
Sbjct: 527 LGSALLAAGRPAEAVPVLERAVEFAPTLAAAHLALGDAQRALERTADAERSYREALRLEP 586

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                R  L    +    ++G    +     E L     S  A     +  +        
Sbjct: 587 AALDGRLRLAELLA----EQGRDAEAAPLLREVLARDAGSADAHYQIGRLGLRAGDTAMG 642

Query: 280 EVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
              L +  ++    P   +        + +  G ++       +    + +   ++   L
Sbjct: 643 VHALREAVRLRPDWPAARLTLGNALARAGDMTGAVEEFRAALALRPNDLGARNNLANALL 702

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
             G + +A  +   A++  P 
Sbjct: 703 ASGRVAEAIREYETALQQQPD 723


>gi|115376114|ref|ZP_01463359.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310821025|ref|YP_003953383.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366929|gb|EAU65919.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309394097|gb|ADO71556.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 459

 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 80/272 (29%), Gaps = 16/272 (5%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL    +     +  +A         +   ++  L   L  + + A      A    E 
Sbjct: 75  RALTEAQVKAGRGDAWIAELQRRNSQAERAVNHYMLGLALFSRASDAG---APAVAAFER 131

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            + +  +     Y L           +A     +A +++P    V   + +      +  
Sbjct: 132 AIALAPSEPEFHYRLGIAHLESEQYTAALGPLRRAAELAPGKAAVRLPLAKALFRTGDAP 191

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-IMASI 264
            A+  LN   + +           +   + +   G   A+     E +KL     I    
Sbjct: 192 GAVAALNAVVRASPSPAEVATARALMNQIADPFVGFPKAAEGKLEEGIKLLQELDIPQQA 251

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
             A   + Q+    A V          H  +   Y  L  ++    +    +  E     
Sbjct: 252 ILAFEELLQSYPDLAVV----------HALLGLAYQRL--DDAGRAVDEFKQAIERAPRD 299

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            ++ + + ++ L     D A      A+++ P
Sbjct: 300 GKNYLYLGELYLSRQRSDAAREAYTKAVELNP 331


>gi|330881884|gb|EGH16033.1| TPR domain-containing protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 556

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 74  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKR--YPDDKRLRLTYARMLV 246

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|329847187|ref|ZP_08262215.1| transglutaminase-like superfamily protein [Asticcacaulis
           biprosthecum C19]
 gi|328842250|gb|EGF91819.1| transglutaminase-like superfamily protein [Asticcacaulis
           biprosthecum C19]
          Length = 1097

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 72/237 (30%), Gaps = 53/237 (22%)

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           ++  AI  + +      + N         R L   +KGD + +  DA+ ++ +  +SI A
Sbjct: 754 DYPAAIDAVTRVL----DINPADPAARYLRGLILLEKGDAVRALDDALANVMMQPDSIEA 809

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY------------------ 299
           ++  A +  +  +  KA  +L+     N      H  +   +                  
Sbjct: 810 TLFLATAYQANIQYDKAVEVLQAAITKNDKDARLHAALGEAFLRCATQAECDSNRPKAVE 869

Query: 300 ------------------THLLSENTVGKLKRALRL---EEINKESVESLVIVSKIALEM 338
                               +  E+   +  R   +     +  +S + L+   +     
Sbjct: 870 AYNKAIALEPSVDLYLNRARVRPES--ERAARFSDIDAALALQPDSTKILLTRGQFYRSY 927

Query: 339 GSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393
              D A A A     + P     + L A I     +N  + +     AL     DP 
Sbjct: 928 KDYDLALADADAIQALEPDSTEAYSLRANIYADQGNNDAEFIQ-LDKALALKPEDPD 983


>gi|254481605|ref|ZP_05094849.1| kinase domain protein [marine gamma proteobacterium HTCC2148]
 gi|214038233|gb|EEB78896.1| kinase domain protein [marine gamma proteobacterium HTCC2148]
          Length = 839

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 59/404 (14%), Positives = 117/404 (28%), Gaps = 82/404 (20%)

Query: 2   LRLIRYFFVISLVICS-FIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           LR++    V+       +             W  +    S                +   
Sbjct: 351 LRMLIIVVVLGGAGFGGYTW-----------WQGQQGSVSKDQRAVTAELAKAFSAM--- 396

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLM------------SIAAHNIPLARKM-- 106
                 + P          + D G  A   G+             +IAA +   AR+M  
Sbjct: 397 ---NEENLPVAASSFYKVLSMDGGNDAAQQGMAEVGALYTAQIEEAIAAEDEDKARRMLL 453

Query: 107 ---HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
                + +  +    +  + LL  Q  LA  Q   A + L                    
Sbjct: 454 DYGGYFAASNNLERLQAEIELLAEQKNLANIQSQRAQKLLSQ---------------VDA 498

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWN 222
           S    D   A R   +A  I PD P      ++    A +  +A +   ++   N     
Sbjct: 499 SVEADDFEQANRLIAQAAAIDPDHPE-----LEGRRDAVDTYQAQSAAYEELWANYTPAQ 553

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV- 281
           R     +IA +    D+ D+ A+     E+  +  +S   +    +   +Q K  +A+  
Sbjct: 554 REEFNSMIAAADRALDENDLGAATIAVNEAQNIASDSPELASRIGRIEAAQIKLAEAQAE 613

Query: 282 -------ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES------- 327
                  +L++        E A         N    +     +   + ++          
Sbjct: 614 ELARLNSMLDEA-------EGATSAIAADPANAAIAMAIYQEVAVQSPDNPRVTKGLASI 666

Query: 328 ---LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
               + +++ A++ G  D A        ++ P  + +  L AQ+
Sbjct: 667 AGFYLGMAEDAVKAGDFDSARQALAAGQELLPDSELLATLHAQL 710


>gi|163742553|ref|ZP_02149939.1| hypothetical protein RG210_06689 [Phaeobacter gallaeciensis 2.10]
 gi|161384138|gb|EDQ08521.1| hypothetical protein RG210_06689 [Phaeobacter gallaeciensis 2.10]
          Length = 818

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 38/285 (13%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATREF 155
           A +  LA      V +    H    + L E +IA  E     +A E  + + +       
Sbjct: 474 AGDPHLAGAALRSVDRTGVEHVPE-INLAEAEIARLEGDVETVAQELTDEVAERTENAPR 532

Query: 156 AVYSLY------FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           A+  L         +      + A  Y       SP    +  AVV    L  E+  +  
Sbjct: 533 ALIELIDLSFAERSALSPDVPDLAASY-EVENRDSPLGADLRRAVVAALALTGEFHDSFN 591

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L    +      R  A+  +   L           Y   I +          +   A+ 
Sbjct: 592 ELEVLSRRDGPAARTAALEPLLTLLTERADDVTFLQYALVIAANGTTAEVAPVADIVAER 651

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           L+     ++A+ IL+K                +   NT  +L  A     +  +   S +
Sbjct: 652 LLDLGFAQQAQSILKK--------------LAMEPGNTKRRLILAK--AALAMDKPHSAL 695

Query: 330 -------------IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                        + ++     G   +A    +   +       F
Sbjct: 696 VELMGLSGSAANKLRAEALWRNGEYARAGEYLLEEQEKDAAARGF 740


>gi|194367814|ref|YP_002030424.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3]
 gi|194350618|gb|ACF53741.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3]
          Length = 890

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +R RA     R L+   +     +     E+LKL  +   A+         Q + 
Sbjct: 767 AGPASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRPDFAQAANNLGFVYYRQQRY 826

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL 302
            +A   LE   K++P    A  Y +L
Sbjct: 827 AEAARWLENTLKIDPSR--AVAYLNL 850


>gi|119570522|gb|EAW50137.1| interferon-induced protein with tetratricopeptide repeats 1,
           isoform CRA_b [Homo sapiens]
 gi|119570523|gb|EAW50138.1| interferon-induced protein with tetratricopeptide repeats 1,
           isoform CRA_b [Homo sapiens]
          Length = 447

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 192 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 251

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262
                +    +   A+ ++  +  KG       + ++            +++      +A
Sbjct: 252 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 311

Query: 263 SICAAKSLISQNKKRKAE 280
            +  A+  I     RKAE
Sbjct: 312 HLDLARMYIEAGNHRKAE 329


>gi|118785037|ref|XP_314265.3| AGAP003363-PA [Anopheles gambiae str. PEST]
 gi|116128163|gb|EAA09649.3| AGAP003363-PA [Anopheles gambiae str. PEST]
          Length = 676

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 71/211 (33%), Gaps = 13/211 (6%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y++   +   GD  +A  +  +A+++ P+       +   Y    E  RA   L +  + 
Sbjct: 428 YNIARLATDQGDRATAFTFYRRAIELHPEYEAAHMNLGNLYRETHELDRAEWHLRRAIEI 487

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            + +      L I ++     + D  A+      +L+L  N            I +    
Sbjct: 488 HEPFPSAWMNLGIVQA----ARKDHDAALTSYQRALQLKPNYANCLYNLGNLYIDKQNSS 543

Query: 278 KAEVILEKIWKVNP-HPEIANIYTHLLS-ENTVGKLKRALRLEEIN----KESVESLVIV 331
            A     +  + NP H   +  + ++L+  +   + +  +R   +           L   
Sbjct: 544 MALRYWREAIQQNPRH---SKAWANILALYDNRDRTEDIIRTSALALTFLPNDTAILFTR 600

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +    ++G  + A +     +   P   ++ 
Sbjct: 601 ANAYGKLGQYETAESLYHQIIAARPDHAVYR 631


>gi|82545001|ref|YP_408948.1| hypothetical protein SBO_2577 [Shigella boydii Sb227]
 gi|81246412|gb|ABB67120.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 663


>gi|332197746|gb|AEE35867.1| superkiller protein 3-like protein [Arabidopsis thaliana]
          Length = 1168

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 30/179 (16%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLEN 236
             A + SP A W    +    +  K+WS A+  L    +      +   A+ L  + L  
Sbjct: 111 RDASEKSPKAFWAFCRLGYIQLHQKKWSEAVQSLQHAIRGYPTMSDLWEALGLAYQRLGM 170

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                 I +Y  AIE   L +  I A + +A   +     RK   + E+  K++P     
Sbjct: 171 F--TAAIKAYGRAIE---LDETKIFALVESANIFLMLGSYRKGVELFEQALKISP----- 220

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                          +    L  +       L+  SK  + +G+   A +    A K A
Sbjct: 221 ---------------QNISVLYGLAS----GLLSWSKECINLGAFGWAASLLEDARKAA 260


>gi|320327393|gb|EFW83407.1| TPR domain-containing protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 556

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 74  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKR--YPDDKRLRLTYARMLV 246

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|320325688|gb|EFW81749.1| TPR domain-containing protein [Pseudomonas syringae pv. glycinea
           str. B076]
          Length = 556

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           QIA        A E   +  +   T   A  +   +  R G  + +  Y  + L      
Sbjct: 74  QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  +       +       L    +   ++  N   L+  ++L     GD   S  
Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304
             +E     +  I   +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L 
Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKR--YPDDKRLRLTYARMLV 246

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E         +   L +   +  E    ++ + LE  + D+A       +
Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296


>gi|303248745|ref|ZP_07334997.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
 gi|302489832|gb|EFL49761.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
          Length = 1308

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 82/309 (26%), Gaps = 50/309 (16%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQY 136
              +   AL  G  +  +     A+ +           N        +   Q        
Sbjct: 645 RDKQAEIALGLGTSAALSG--RPAKAVEPLSRALGLLDNGPRKAKAIMTLAQAYGTLGNS 702

Query: 137 NIAHEKLEMMLQIP---ATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTE 192
             A          P    +   A       +    GDL +A++   +AL +S     +  
Sbjct: 703 QKAIAFWRQAAAAPGALRSDVAASQENLGYALTGAGDLPAAEKAFRRALALSGPNWRLLS 762

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+ Q       +  A+    +      +     A+ L    L     G    +  D  ++
Sbjct: 763 ALGQIAYKTGRYQEALDDFTRSLALNPDPATRIAMALCYEKL-----GKPGLALVDYDKA 817

Query: 253 LKLCDNSIMASICAAKSLISQ------NKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
                +    S    ++           + R    I  + +K      +   Y       
Sbjct: 818 ---APDLASLSAQDRRAYYRAQGFLYAGESRNEAGI--EAFKAT----LELGY----DPE 864

Query: 307 TVGKLKRALRLEEINKESVESLVIV-----------------SKIALEMGSIDQAHAKAM 349
           T  +L R  RL    +E+ ++L  V                 + +A      D+A     
Sbjct: 865 TATRLGRLERLAGHPEEAKKTLEAVDPATLPPDLKIMRLSELASLAEADKDYDRARKFLE 924

Query: 350 LAMKIAPRK 358
            A+ I P  
Sbjct: 925 AALAIRPDA 933



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 88/306 (28%), Gaps = 40/306 (13%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
             L +  AH +            +   H +   +L      + E +   A ++ E+ L++
Sbjct: 23  QALAAGNAHEVGATDGKDKSWIGRQLSHFKAYPHLDMAYRRMKENRLEDAQKEFELYLKL 82

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A          +G  ++A   A + L   PD            + A +   A+ 
Sbjct: 83  QPDDLAARGDYMDLLYDLGRYDAAMAEAHRILAAKPDNAAALLTSGLCLMRAGDLKSAVA 142

Query: 210 FLNQ--KKKNAKEWNRNRAILLIA-------------------------RSLENA----- 237
            + Q       K      A+L  A                          +L+ A     
Sbjct: 143 PMEQAVALTKDKPVPHRVAVLATADVLAKLGRYQQALSLLSGLPETADNYALDQAKGVLW 202

Query: 238 ----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH- 292
               D    ++++  A+ +       +      A +       RKA   L +   + P  
Sbjct: 203 AKKGDAAQAVSAFEKALAAAGNDKEKLATLRALAVASADTGDARKAGAYLTEARALAPKD 262

Query: 293 PEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P++          +       +    L  +   ++E+ + ++ +   +   D A A+   
Sbjct: 263 PDLLHQQAVLANKAGRFEEAARLGQELTRLAP-TLENKLFLANVLASLKRYDAAAAELTP 321

Query: 351 AMKIAP 356
            +   P
Sbjct: 322 LLAQKP 327



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 85/283 (30%), Gaps = 49/283 (17%)

Query: 134 RQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                A    E  L        +   + +L   S   GD   A  Y T+A  ++P  P +
Sbjct: 206 GDAAQAVSAFEKALAAAGNDKEKLATLRALAVASADTGDARKAGAYLTEARALAPKDPDL 265

Query: 191 --TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              +AV+        +  A     +  + A         L +A  L +  + D  A+   
Sbjct: 266 LHQQAVLANKA--GRFEEAARLGQELTRLAPTLENK---LFLANVLASLKRYDAAAAELT 320

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIY----THLL 303
            + + K           A +  +       +A+            P+ A  Y      L 
Sbjct: 321 PLLAQKPKPK------EAYRLNMRLGVLAMQADK-----------PDEAAAYFRAAVDLR 363

Query: 304 SEN-TVGKLKRALRLEEINKESVESLVIVSKIALE-------------MGSIDQAHAKAM 349
            E   + +L RA +     +E+ ++L     +  +             +     A     
Sbjct: 364 REPLALIRLSRAEQRAGRTQEAAQALHEAVSMGADPNTLLELATLLTKLDKNTAAITYLD 423

Query: 350 LAMKIA--PRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAM 389
            A+  A  P++   +L +     A + +        + AL A 
Sbjct: 424 KALAEAKDPQQRSHILAMKATLLAETGDNAAARKVLEEALQAP 466


>gi|197128016|gb|ACH44514.1| putative tetratricopeptide repeat domain 1 [Taeniopygia guttata]
          Length = 255

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              ++  A     +  +     + ++RA+L   R+     +    A+  D  ++++L  +
Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173

Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285
            I A +  A+      K  +A      +LEK
Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKAVLEK 204


>gi|218438243|ref|YP_002376572.1| hypothetical protein PCC7424_1257 [Cyanothece sp. PCC 7424]
 gi|218170971|gb|ACK69704.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 237

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 7/131 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           ++ D   A     KAL+  P+           Y+  +++ +AIT   +  K   +     
Sbjct: 97  QLKDFPKALADYQKALEFEPELVEAYINRGNVYLELEDYQKAITDYTEALKFNPD----E 152

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A      +L   + G+   +  +  ++++L      A             ++KA    +K
Sbjct: 153 AFAHNNLALAYFNLGNPERAKLELTKAVELDPAYGEAYFNRGLVFFELGDEQKARADFQK 212

Query: 286 I---WKVNPHP 293
               W+   +P
Sbjct: 213 AAQLWQQEGNP 223


>gi|251800015|ref|YP_003014746.1| hypothetical protein Pjdr2_6057 [Paenibacillus sp. JDR-2]
 gi|247547641|gb|ACT04660.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. JDR-2]
          Length = 847

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 23/206 (11%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-- 226
           D ++A +   KA  I P  P          +L  ++  A+  L     +     +     
Sbjct: 195 DYHTALQALNKAQGIDPGHP-------DLLILRAKYDMAVGRLELALDHLTGLTKQDPQD 247

Query: 227 -ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              +  RS      G    +Y      L L   +        K  +S     +A   L++
Sbjct: 248 YYAIYYRSGLLYRMGHYEEAYAGYQSILPLRPEATDVLFSLGKCAVSIGLHHEAIGYLKQ 307

Query: 286 IWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           +  + PH E     + + Y          ++     +     +++E+   +    L    
Sbjct: 308 LDDILPHDEEVINLLLSAYRF--------RIDELNAIYNDEPQNMEAGHELVAAYLACHQ 359

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           +++A+       +  P   +++ +AQ
Sbjct: 360 LEEAYQLLTELEEKHPSVRLYVQMAQ 385


>gi|110165339|gb|ABG49879.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium
           erythraeum IMS101]
          Length = 559

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 14/108 (12%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216
             L        D  SA     +A+DI                  +++  AI   N+  K 
Sbjct: 442 RGLA--KYEQQDYQSALAEFDRAIDIDSSHIDAYIYRGDAKDKLEDYEGAIADYNEAIKI 499

Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              + K +     +L           GD   +  D  +++KL  N   
Sbjct: 500 DSSHPKAYYSRENVL--------RKAGDSREAIADYDQAIKLDPNYTP 539


>gi|313894392|ref|ZP_07827957.1| tetratricopeptide repeat protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313441216|gb|EFR59643.1| tetratricopeptide repeat protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 164

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 12/162 (7%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   GD   A   AT ++  +P++            L  +   A    + KK    + 
Sbjct: 12  KQALSSGDYAKAIEEATASIKDNPNSSEAYSVRGFAMALHGD--TAKGLADTKKAYDLDP 69

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N          ++    +G +  S     + L+   ++  +    A     Q    KA  
Sbjct: 70  NN--VANYYNMAMVYKLQGQLNDSKQWFEKVLEKDPSNTWSVYGIATIYADQGDDTKALD 127

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKL---KRALRLEEI 320
            LEK   +NP     ++      ++   +     R   L  +
Sbjct: 128 WLEKAININP-----SVKAVAAEQDHFERFHNNARFKTLVGL 164


>gi|262304963|gb|ACY45074.1| acetylglucosaminyl-transferase [Semibalanus balanoides]
          Length = 289

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 69/185 (37%), Gaps = 11/185 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             A+++ P+ P     +          + +    N   +         A  L   +    
Sbjct: 10  RHAIELQPNFPDAYCNLANALKEKGLVAESEECYNTALRLMPT----HADSLNNLANIKR 65

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           ++G    +    +++L++      A    A  L  Q K  +A +  ++  ++ P    A+
Sbjct: 66  EQGYTEEAIRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123

Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            Y+++ +     ++    L+   R  +IN    ++   ++ I  + G+I +A      A+
Sbjct: 124 AYSNMGNTLKEMQDIPAALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183

Query: 353 KIAPR 357
           ++ P 
Sbjct: 184 RLKPD 188



 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 6/157 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
            ++   +    H + L  L    I   +     A       L++      A  +L     
Sbjct: 42  CYNTALRLMPTHADSLNNL--ANIKREQGYTEEAIRLYLKALEVFPEFAAAHSNLASVLQ 99

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G LN A  +  +A+ I P        +       ++   A+   ++  +    +    
Sbjct: 100 QQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIPAALQCYSRAIQINPAF---- 155

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           A      +  + D G++  +      +L+L  +   A
Sbjct: 156 ADAHSNLASIHKDSGNIPEAIQSYRTALRLKPDFPDA 192


>gi|74220680|dbj|BAE31546.1| unnamed protein product [Mus musculus]
          Length = 386

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
                   +  + +L         ++  A   +E  L   + + + +        R   +
Sbjct: 122 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 181

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           + A     +AL  SP + ++                         +    + +  + L  
Sbjct: 182 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 218

Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +R+ +   + ++      AI    E+LKL     MA +C A+     ++  +AE   +K 
Sbjct: 219 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 278

Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                      +  H+  +  +    R  R  + +K+S +  + +    L++     A  
Sbjct: 279 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 328

Query: 347 KAMLAMKIAPRKEIF 361
           K + A++    + + 
Sbjct: 329 KLLTALEKVAERRVC 343


>gi|33864076|ref|NP_895636.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33635660|emb|CAE21984.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 549

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 29/249 (11%), Positives = 75/249 (30%), Gaps = 17/249 (6%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATK 179
            L        + + + A    + +L +     +A+    S+  E  R    +    + ++
Sbjct: 3   QLQAAVALHKQGELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKR---FDEGIDFLSR 59

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A+ + PD P     +   +  ++ W  AI+   +            A+  +   L+  ++
Sbjct: 60  AISLQPDNPDAIYNLGNVFKDSERWDEAISCYEKTL--GLRAESPEALNNLGICLKEVER 117

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
            +           + +      A +    +   Q K  +A+        +   P+    Y
Sbjct: 118 FEYSE--IVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYRNAIDLK--PDFEAAY 173

Query: 300 THL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             L             +    +  E+  +  +    +  +  E G  + A         +
Sbjct: 174 FALGLVLKEEGKVEEAIASYRKAIELKPDFADVYFALGLVLKEAGEFEAARQIVSALSTV 233

Query: 355 APRKEIFLL 363
              ++  LL
Sbjct: 234 NAMEDSTLL 242


>gi|313157937|gb|EFR57343.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 994

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 86/263 (32%), Gaps = 28/263 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
            GL +  A ++  A++  +  +  +       L    + +IA A+  Y +A  K    L+
Sbjct: 434 RGLEAYNAGDMRAAQRYLAESAAINVSPKYSALNSFWQGEIAFAQGDYTVAAAKYNAYLK 493

Query: 149 I----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVL 200
                      A+Y+L + +    D+  A+    K L + P            +      
Sbjct: 494 RAPRSEKEYAMALYNLGYCAFSRMDMAQARGSFEKFLAVYPARDRYRADACNRLGDIRYS 553

Query: 201 AKEWSRAITFLNQKKKNAKE----WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            +E+  A+   ++               RA+ L         K   +     A E     
Sbjct: 554 DREFEAAVAEYDRAAALGGPEKYYAQYKRAVTL-GILGRTEQKQQALRQIIAAGEGDYAD 612

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEK---IWKVNPHP-----EIANIYTHLLSENTV 308
                AS    +S I+Q +  +    LEK    +  +P       ++   Y +L   +  
Sbjct: 613 ----EASYELGRSHIAQEQYAEGAAQLEKFVADYPSSPRRAQALSDLGLAYLNL--GDKE 666

Query: 309 GKLKRALRLEEINKESVESLVIV 331
             L+    + E   +S E+   +
Sbjct: 667 KSLRYYDMVVETAPQSSEAKGAM 689


>gi|325107573|ref|YP_004268641.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324967841|gb|ADY58619.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 448

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 4/93 (4%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE-KLEMMLQIPATREF-AVYSLYFES 164
            S         ++ L   L+     A  +   A +  L  + + P      A        
Sbjct: 124 ESANRALELNPDDELSLNLQSMALRALGRPLEAEQVALLSLHRNPEIAFSHANRGWGL-- 181

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
               D   A+++  +AL ++P+  W  + ++  
Sbjct: 182 LERKDYAGAKKHFREALRLNPNYEWARDGLMAA 214


>gi|297519130|ref|ZP_06937516.1| hypothetical protein EcolOP_15928 [Escherichia coli OP50]
          Length = 690

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|282164288|ref|YP_003356673.1| hypothetical protein MCP_1618 [Methanocella paludicola SANAE]
 gi|282156602|dbj|BAI61690.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 328

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 89/258 (34%), Gaps = 41/258 (15%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +Y+ A  +   ++        A Y L      +G+   A +   +A    PD   +   +
Sbjct: 61  RYDDAIREFTAIVNNVPDFSTAHYELAKTYLLMGENREALKEFERAARFEPDNMDIQFFL 120

Query: 195 VQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILL--------------------- 229
                    L++E   A   ++    +A   NR   ILL                     
Sbjct: 121 RYVPQFTKPLSEELKDAQNGVDMDAGDAFAHNRLGVILLMMDSLDCGLQEIQWAVELENK 180

Query: 230 ------IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 +A +    D+G    ++ +A  +  +   ++ A +      +   ++  A    
Sbjct: 181 AEYHLNLAYAQSLFDEG---EAWREADLASSMGPENLDALLFLGALYMDLGREADAFATY 237

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           E    + P     H  I N+Y  + +   + +++      ++N ++  +   ++++ +  
Sbjct: 238 EDAVSIYPGSDLLHYLIGNVYFAVQNIG-MARIE-IETAVKLNPDNYAARRALAELYMIS 295

Query: 339 GSIDQAHAKAMLAMKIAP 356
           G  D+A  +    +K+ P
Sbjct: 296 GRDDKAIDQLEELVKMEP 313


>gi|182412285|ref|YP_001817351.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177839499|gb|ACB73751.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 627

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 63/207 (30%), Gaps = 12/207 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G L  A+    +A+  +P +      +          + A   L +  +         
Sbjct: 18  RAGRLVQAEAQYRQAVLGAPKSFEALHLLGLVNFQLGRMAEAADLLQRALRVNP----QS 73

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A   +   +     G    +       +        A    A  L +QN+ R+A    +K
Sbjct: 74  APCAMQLGMVLVALGRHKEAEAHLRGVVTRQPQLHEAWTHLAHCLKTQNRLREAIDCYQK 133

Query: 286 IWKVNPHPEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSI 341
             ++ P   +A  Y + L+ +   +    L    R   I+    E+    ++   +   I
Sbjct: 134 AIELEPKDALA-WYNYGLTLSLAARPLEALACHERALAIDPHHAEARFGRAQALQQTNRI 192

Query: 342 DQAHAKAMLAMKIAP---RKEIFLLLA 365
            +A       +   P       + L A
Sbjct: 193 PEAVEDYGRVLARQPGNLEARSYRLFA 219


>gi|33152427|ref|NP_873780.1| hypothetical protein HD1355 [Haemophilus ducreyi 35000HP]
 gi|33148650|gb|AAP96169.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 396

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 26/180 (14%)

Query: 66  LSCPAMLFHMLHKR----NYDKGYKALY--------TGLMSIA--AHNIPLARKMHSYVS 111
                 L ++   R       + ++AL           L++    A +   A       +
Sbjct: 77  FEAELTLGNLFRSRGEVDRALRIHQALDSSLNYSIEQKLLAKQQLAKDFMAAGFYDRAEN 136

Query: 112 QQHTFHNEY------LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE- 163
                 +E       L  L+   +     ++  A    E +L+  P T    +   Y E 
Sbjct: 137 YYILLLDEPEFAVNSLTQLMV--LYQKTNEWKKAINVAEKLLKIDPKTDRIPLSHYYCEY 194

Query: 164 --SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             + +  D +   R   KAL+ SP     +  +   Y+   ++S+A+T          ++
Sbjct: 195 AQAIKSEDEDLYLRLLGKALEYSPLCTRASMLLGDYYLAQGQFSQALTHFEHILVQDPDY 254


>gi|71414808|ref|XP_809492.1| vesicular transport-associated repeat protein [Trypanosoma cruzi
           strain CL Brener]
 gi|70873884|gb|EAN87641.1| vesicular transport-associated repeat protein, putative
           [Trypanosoma cruzi]
          Length = 1174

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 83/296 (28%), Gaps = 15/296 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               AR++      +           L  + A A R    A E   +  +    R  A  
Sbjct: 573 EEAEARRLAEEAEARRLAEEAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEE 632

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV----QQYVLAKEWSRAITFLNQK 214
               E+ R+ +   A+R A +A +    A       +    +   LA+E + A     + 
Sbjct: 633 ---AEARRLAEEAEARRLAEEAAEARRLAEEAEARRLAEEAEARRLAEEAAEARRLAEEA 689

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +          A  L   + E     +   +   A E+              A++     
Sbjct: 690 EARRLAEEAAEARRLTEEAAEARRLAEEAEARRLAEEAEARRL------AEEAEARRLAE 743

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +  +A  + E+  +     E A     L  E    +            E       +++ 
Sbjct: 744 EAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEEAEARRLAEEAAEARRLAEE 803

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           A E   + +  A+A    + A  + +       E        +     + A  A  
Sbjct: 804 AAEARRLAEEAAEARRLAEEAEARRLAE--EAAEARRLAEEAEARRLAEEAAEARR 857



 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 78/292 (26%), Gaps = 6/292 (2%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
               AR++      +           L    A       +A E  E         E    
Sbjct: 371 EEAEARRLAEEAEARRLAEEAAEARRL----AEEAEARRLAEEAAEARRLTEEAAEARRL 426

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +   E+ R+ +   A+R A +A +    A    EA       A+    A      ++   
Sbjct: 427 AEEAEARRLAEEAEARRLAEEAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAE 486

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +     R     A +   A++ +      +A       +         A++     +  +
Sbjct: 487 EAAEARRLAEEEAEARRLAEEAEARRLAEEAEARRLAEEAEARRLAEEAEARRLAEEAAE 546

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A  + E+  +     E A     L  E    +            E       +++ A E 
Sbjct: 547 ARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEEAEARRLAEEAAEARRLAEEAAEA 606

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             + +  A+A    +         L  + E        +     + A  A  
Sbjct: 607 RRLAEEAAEARRLAEEEAEAR--RLAEEAEARRLAEEAEARRLAEEAAEARR 656



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 78/266 (29%), Gaps = 28/266 (10%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
                AR++      +           L  + A A     +A E  E            + 
Sbjct: 774  EEAEARRLAEEAEARRLAEEAAEARRLAEEAAEA---RRLAEEAAEARRLAEEAEARRLA 830

Query: 159  SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                E+ R+ +   A+R A +A +    A    EA                    + +  
Sbjct: 831  EEAAEARRLAEEAEARRLAEEAAEARRLAEEAAEAR-------------RLAEEAEARRL 877

Query: 219  KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNK 275
             E    R +   A +   A++ +      +A E+ +L +    A   A   A++     +
Sbjct: 878  AEEAEARRLAEEAEARRLAEEAEARRLAEEAAEARRLAEEEAEARRLAEEEAEARRLAEE 937

Query: 276  KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            + +A  + E+          A        E    +L           E  ES  +  + A
Sbjct: 938  EAEARRLAEEA---------AEARRLTEEEAEARRLAEEAAEARRLAEEAESRRLAEEAA 988

Query: 336  LEMGSIDQAHAKAMLAMKIAPRKEIF 361
                  ++A     LA + A  + + 
Sbjct: 989  EARRLAEEAAEARRLAEEAAEARRLA 1014


>gi|71744978|ref|XP_827119.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70831284|gb|EAN76789.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 1351

 Score = 41.5 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 93/287 (32%), Gaps = 36/287 (12%)

Query: 97  AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATRE 154
           + N+  A+ M  + +  +H   +    +LL  QI       ++A + LE  +      ++
Sbjct: 508 SGNLNKAQAMITTNIRHEHAIPD---AFLLSAQICQYVGNVSLASQALEQALTLDFEVKD 564

Query: 155 FAVYSLY---------FESCRIGDLNSAQ-------RYATKALDISPDAPWVTEAVV--- 195
             +Y+L               +  L  A            K   + P +     ++    
Sbjct: 565 QPLYNLLYGSVLGMMNKHKEALEALQEALKVVKDKSHVTAKGRLVQPLSVQDHVSLYLLI 624

Query: 196 -QQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            Q ++   +   A   +              R  +  A     A + D+  +     +  
Sbjct: 625 AQTHLKLHDAEEARATVAEATALFKDTAQAGRVAIASAM---IAARTDVDRALEILRQVP 681

Query: 254 KLCDNSIMASICAAKSLI--SQNKKRKA---EVILEKIWKVNPHPEIANIYTHLLSENTV 308
              D  I A    A   +   QN++  A   E ++E++     +  +   YT++  +   
Sbjct: 682 PRSDFFIAAKTRMANIYLIHRQNRQMYAECFEQLVEEVATAQSYIALGEAYTNI--QEPE 739

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +    + + I+ ++ +  V++ +  +      +A      A+   
Sbjct: 740 KSISAYEKAKAIDPDNSDLAVLIGRALVSTHDYQRAIRYYRDAVASD 786


>gi|313199820|ref|YP_004038478.1| hypothetical protein MPQ_0043 [Methylovorus sp. MP688]
 gi|312439136|gb|ADQ83242.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 876

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 60/202 (29%), Gaps = 21/202 (10%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAI 227
            +AQ     AL + P        +   +   +    AIT    L        +   N  +
Sbjct: 329 AAAQDLFATALAMEPQNDNARYGLALVFAREQNHEEAITVAQGLPANDAGRNDLLLNAYL 388

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L  ++    D    +     A ++  L      AS+  A S        +A  +   ++
Sbjct: 389 ALAKQAYGQQDSQQTLNYLQQAKQAGAL-PRY--ASLMEAWSQFGLGNTTQAAEVFASLY 445

Query: 288 KVNPHPEIA----NIYTHLLSENTVGKLKRALRLEEINKES-----------VESLVIVS 332
           +  P  E A      Y  L   + +  L     L    K              E+  + +
Sbjct: 446 RAQPDKESAAGVMASYLKLDRADDIAPLATTEPLASQYKHHVAAGLFGQKRFFEARALDA 505

Query: 333 KIALEMGSIDQAHAKAMLAMKI 354
               + G I    A A +A++ 
Sbjct: 506 DTYGDAGGIAAPQAGAGIALRD 527


>gi|302342825|ref|YP_003807354.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
 gi|301639438|gb|ADK84760.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
          Length = 349

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 70/192 (36%), Gaps = 21/192 (10%)

Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L  +      E+++  A E    +L I  + E   Y++ + S   G    A  Y  KA  
Sbjct: 145 LYAKGLQLMEEKRWEEALESFRRILGIYESAEI-YYNMGYISTARGSYEEAIHYFRKATQ 203

Query: 183 ISPDAPWVTEAVVQQY-------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----- 230
           I+       E + + Y       +  K +  A     +++ ++        +L +     
Sbjct: 204 INNAFAQAHEKMGECYRQLARPKLAQKHFELAADIYMERRMDSNAEQVLNQVLELNPNTI 263

Query: 231 ----ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               +  +    +G    +     ++LK+   ++      A+        ++A ++LE+ 
Sbjct: 264 NVYNSLGILYRRQGRYELAIKQYKKALKVNPEAVNIHYNLARIYYETKDYQRALILLEQA 323

Query: 287 WKVNPHPEIANI 298
            K+N  P+ A+ 
Sbjct: 324 LKIN--PDFADA 333


>gi|284036905|ref|YP_003386835.1| hypothetical protein Slin_1991 [Spirosoma linguale DSM 74]
 gi|283816198|gb|ADB38036.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 367

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 81/220 (36%), Gaps = 30/220 (13%)

Query: 189 WVTEAVVQQ--YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              +  ++    +  +E+  AI F ++      ++    A     R L      D   + 
Sbjct: 51  EAAQFFLKGNVQLQKREYKEAIRFYSEAIAKKSDF----ADAYNNRGLAKFRDDDREGAL 106

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-----LEKIWKVNP--HPEIANIY 299
            D   +++L  +   A    A+ L+       A  +     + K ++ +      + ++Y
Sbjct: 107 ADYTRAVELDPDFGTAYFNRAEVLLETGDA--AGSVSDLMRINKQYQDSTFYQTRLGDVY 164

Query: 300 THL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             L           RAL+L   N ++VE+L     +     + DQA      A+++ P++
Sbjct: 165 VRLGKQAEAQAAYDRALQL---NPDNVEALTNRGALLYSQKAYDQAGEDIQRALRLNPKQ 221

Query: 359 EIF-----LLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392
           +       LLLA++      N  + L + + AL      P
Sbjct: 222 DAALNNQSLLLARV-----GNFAEALVYVERALALQPRQP 256


>gi|229496266|ref|ZP_04389986.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316844|gb|EEN82757.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
          Length = 1009

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 54/317 (17%), Positives = 100/317 (31%), Gaps = 60/317 (18%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR------------------EFAVY 158
           +  L      +A+     A      +       P TR                  E    
Sbjct: 177 IAKLYVASSKMAKGDLQAAEAIYRSLSGDRELAPETRIGMAALSYYSGDYAKAVAEVGEI 236

Query: 159 -----------SLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVV--QQYVLA 201
                      SL   +     R+GD  +A +Y  + ++ SP+     + ++    Y+  
Sbjct: 237 ERVEPRLASNPSLLQVAGNAYYRLGDAPNASKYLERFIEDSPEFASPEDFLLLGAAYMEQ 296

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIE-----SLKL 255
           + ++ AI  L Q  +  K      A L + R+L +  +    I +Y  A+E      ++ 
Sbjct: 297 QRYNEAIEPLKQATQ-GKGATGYAASLYLGRALRDQGNYPQAIVAYERAVEESAPTQVRE 355

Query: 256 CDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKL 311
                MA +  +    +     R AE  L   +  + H      +    +L + +    L
Sbjct: 356 AAMYEMALVMRSSGQSNFGQDVRIAERFL-NTFPTSKHRPTMEKFLTEFYLSNTDYATSL 414

Query: 312 KRALRLEEINKESVESLVIV----SKIALEMGSIDQAHAKAMLAMKIAPRKEIF-----L 362
               RL++      E+   V    +  AL  G   QA      A+       ++     L
Sbjct: 415 VSIRRLKKTTPAIDEARQYVLNHLALDALSQGKFSQATRYIEDALDKQAVSSLYKGESLL 474

Query: 363 LLAQIEQANSHNTDKIL 379
           + A I +A       I 
Sbjct: 475 IQADILRAQGDYAGSIR 491


>gi|193787406|dbj|BAG52612.1| unnamed protein product [Homo sapiens]
          Length = 447

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +    G     ++Y  +AL       +V     + Y       +A+  L +  +   
Sbjct: 192 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 251

Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262
                +    +   A+ ++  +  KG       + ++            +++      +A
Sbjct: 252 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 311

Query: 263 SICAAKSLISQNKKRKAE 280
            +  A+  I     RKAE
Sbjct: 312 HLDLARMYIEAGNHRKAE 329


>gi|162455564|ref|YP_001617931.1| hypothetical protein sce7282 [Sorangium cellulosum 'So ce 56']
 gi|161166146|emb|CAN97451.1| hypothetical protein sce7282 [Sorangium cellulosum 'So ce 56']
          Length = 453

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 67/231 (29%), Gaps = 22/231 (9%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYN 137
           D+  +AL   +          +   H+++ +     +  L            ALA     
Sbjct: 66  DREIEALSRRIAKAPGGADLWSALGHAWLRKARASGDPSLYGRAHACAEVGLALAAEDRA 125

Query: 138 ----------------IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
                            A +  E +L        A+ +L   +  +G    A   A + +
Sbjct: 126 SLNLLGLVLIHERRFTEARDAAERVLSRDEGDALALGTLSDAALALGAFQVAAHAAQRMV 185

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKG 240
           D  P  P    A      L  + + A   +               A  L   ++    +G
Sbjct: 186 DQRPGLPSYARAA-HLRWLQGDAATAKRIIRLAIDAGDPGEPEALAWTLTQAAMMFWHEG 244

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           D   +      +L        A    A+  +++    +A  +LE+  + +P
Sbjct: 245 DNEGADLGFERALAAQAGYPPALAGRARVALARGAWGRAVELLEQAHQQSP 295


>gi|119513703|ref|ZP_01632700.1| hypothetical protein N9414_07524 [Nodularia spumigena CCY9414]
 gi|119461639|gb|EAW42679.1| hypothetical protein N9414_07524 [Nodularia spumigena CCY9414]
          Length = 161

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+   A     +A+ ++P                K+ + A+   NQ        +   AI
Sbjct: 22  GENQRAIADYNQAIRLAPRYAEAYNNRGNARAAQKDNNGALDDYNQAIS----LDSRYAI 77

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
               R    A +GD   +  D  ++++L      A      +  +Q  +  A   LE+ 
Sbjct: 78  AYNNRGNARAAQGDRQEAIADYNQAIRLNSTFGPAYNNRGNARAAQGDREGALQDLERA 136


>gi|328953610|ref|YP_004370944.1| Cold-shock protein DNA-binding protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328453934|gb|AEB09763.1| Cold-shock protein DNA-binding protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 1568

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 37/176 (21%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD-LNSAQR-YA-------- 177
           +  L E+  + A +                  L  E+ + GD   SA +  A        
Sbjct: 499 RAQLIEKDLDKAVQ------------------LLREAIKRGDNTESAVKDLASVLVQQGK 540

Query: 178 -TKALDISPDAPWVT-------EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +A+        V+         ++  Y  A ++  AIT L +K K A      RA  L
Sbjct: 541 PEEAIKTLESHKQVSSDPKSIDNLLITSYQNAGQYDHAITLLQKKLKQADN-EIKRAPYL 599

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              +L N  KGD   S     + L    +++      A  L  Q    +A+ +L+K
Sbjct: 600 FQIALMNLKKGDYGQSEQFFRKILTKQPDNVTVQRNIAICLSKQGHYDEAKKLLQK 655


>gi|282879056|ref|ZP_06287816.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
 gi|281298790|gb|EFA91199.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
          Length = 535

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 14/176 (7%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A  E       E  +   +       A+ +L   + + GD   A RY  +AL ++P AP 
Sbjct: 344 ATLEDNMAKKEEIYKRTAEYYDKDYRALNNLATLAFKKGDEMEATRYLERALRVNPQAPE 403

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----ARSLENADKGDMIAS 245
               +    ++      A T + +            ++ L     A++ ++ +  +  ++
Sbjct: 404 ALANLGIMELVNGNVKEAETSIAKALGEQNVNVAIGSLNLAKGNFAQAEKDFEDVNSNSA 463

Query: 246 YHD-------AIESLKLCDNSIMASI---CAAKSLISQNKKRKAEVILEKIWKVNP 291
                     A  +  L   +   ++     A     +  K  AE  L++  K +P
Sbjct: 464 ALAQLMNKNYAAAAATLDKVANPNALTDYLHAIVAARRGNKFAAESYLKEALKKDP 519


>gi|297724923|ref|NP_001174825.1| Os06g0523800 [Oryza sativa Japonica Group]
 gi|255677105|dbj|BAH93553.1| Os06g0523800 [Oryza sativa Japonica Group]
          Length = 699

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 87/281 (30%), Gaps = 29/281 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--IAHEKLE-MMLQIPATRE 154
             +  AR+++          +E+   L        ER      A    +  + ++P  + 
Sbjct: 240 GEVERARRVYERA-ADLLADDEHAEVLFVAFAEFEERCREVERARAVYKYALDRVPKGQA 298

Query: 155 FAVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
             +Y  +    +  GD            +      +  +P         ++         
Sbjct: 299 EELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKD 358

Query: 206 RAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD-- 257
           R      +   N       R       L I  +L E  D  DM  +     E LKL    
Sbjct: 359 RIREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELDAKDMERTREVYSECLKLIPHK 418

Query: 258 --NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                   + AA+  I Q   + A  IL     + P  +I   Y  +  E  +G  +R  
Sbjct: 419 KLTFSKMWLMAAQFEIRQKNLKAARRILGNAIGMAPKGKIFKKYIEI--ELYLGNFERCR 476

Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            L     E +  +  + +  +++   +G  D+A +   LA+
Sbjct: 477 TLYEKYIEWSPANCYAWMKYAELEKSLGETDRARSIYELAI 517


>gi|206559199|ref|YP_002229960.1| hypothetical protein BCAL0804 [Burkholderia cenocepacia J2315]
 gi|198035237|emb|CAR51111.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 607

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 84/223 (37%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A    D    A    +A++   V   +    +  L    KN  + NR  A L IAR
Sbjct: 169 ARELARATGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
                D  D   +     ++L++  + + A++     L       +A  I      V  +
Sbjct: 224 QQLAVDDKD--GAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D+A   
Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDEATGY 337

Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++      + ++ LAQI    +++  +   W   
Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 10/154 (6%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +   A      +L      D +++ +   +      +S  AS   A  L+   K 
Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161

Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
             A+ +L +           P   +A     +   + VG L     + + +    E+ + 
Sbjct: 162 ADAQPMLARELARATGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLA 220

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +++  L +   D A      A++I P      L+
Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQIRPDYLPAALM 254


>gi|297183881|gb|ADI20003.1| FOG: tpr repeat-protein [uncultured gamma proteobacterium
           EB000_65A11]
          Length = 472

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 80/202 (39%), Gaps = 12/202 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R GD+ +A     + + ++P      + +   Y+    +++A        K   + N 
Sbjct: 3   AHRRGDIKAAIPEYLRVISLAPTNSVAIQLLGACYLQINRFAQARESFEAAIK--LDANY 60

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A   +AR   +  + D+ A+  +   +  L  ++       A  L ++ +  ++E + 
Sbjct: 61  GDAFHNLARL--DEAEHDLDAAEKNYRRAHALVPSNADTVFSLANVLKAKGELAESEQLY 118

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI--VSKIAL 336
            K  +++P     H ++A +  HL  ++ +  ++  +        + +  +   + K   
Sbjct: 119 RKTIELSPSYAPAHRQLARLIDHLSVDDDIQAMEALIA-APSTPSNAKMHLAFGLGKCFE 177

Query: 337 EMGSIDQAHAKAMLAMKIAPRK 358
           ++G  ++A      A ++   +
Sbjct: 178 DLGLFERAMTYFNSANRLMRDQ 199


>gi|261331352|emb|CBH14346.1| tetratricopeptide repeat protein, predicted [Trypanosoma brucei
           gambiense DAL972]
          Length = 1362

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 93/287 (32%), Gaps = 36/287 (12%)

Query: 97  AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATRE 154
           + N+  A+ M  + +  +H   +    +LL  QI       ++A + LE  +      ++
Sbjct: 519 SGNLNKAQAMITTNIRHEHAIPD---AFLLSAQICQYVGNVSLASQALEQALTLDFEVKD 575

Query: 155 FAVYSLY---------FESCRIGDLNSAQ-------RYATKALDISPDAPWVTEAVV--- 195
             +Y+L               +  L  A            K   + P +     ++    
Sbjct: 576 QPLYNLLYGSVLGMMNKHKEALEALQEALKVVKDKSHVTAKGRLVQPLSVQDHVSLYLLI 635

Query: 196 -QQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            Q ++   +   A   +              R  +  A     A + D+  +     +  
Sbjct: 636 AQTHLKLHDAEEARATVAEATALFKDTAQAGRVAIASAM---IAARTDVDRALEILRQVP 692

Query: 254 KLCDNSIMASICAAKSLI--SQNKKRKA---EVILEKIWKVNPHPEIANIYTHLLSENTV 308
              D  I A    A   +   QN++  A   E ++E++     +  +   YT++  +   
Sbjct: 693 PRSDFFIAAKTRMANIYLIHRQNRQMYAECFEQLVEEVATAQSYIALGEAYTNI--QEPE 750

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +    + + I+ ++ +  V++ +  +      +A      A+   
Sbjct: 751 KSISAYEKAKAIDPDNSDLAVLIGRALVSTHDYQRAIRYYRDAVASD 797


>gi|255601934|ref|XP_002537778.1| conserved hypothetical protein [Ricinus communis]
 gi|223515103|gb|EEF24606.1| conserved hypothetical protein [Ricinus communis]
          Length = 215

 Score = 41.5 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 26/183 (14%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESC-RIGD---- 169
           E LV   E Q+  A+ +Y  A  K +   ++       +      L   S    GD    
Sbjct: 31  EPLVQ--EAQVLTAQGKYRDAVSKYQEATKLDPASSMPLSGAAFVLMKSSQIAQGDAAGR 88

Query: 170 -LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
               ++  A +AL +  D P   E               +  L   +         +A  
Sbjct: 89  LRQQSESLARQALVLGADDPMAQEV--------------LRNLLDDRPPPLHVPNQQAWK 134

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           ++              +     E+ +L      A + A      Q K  +AE +  K  +
Sbjct: 135 VMQEGEVLFQSNKPDEARVKYEEAARLDPQYSSAVVNAGDCYFVQKKWPEAEALFRKATE 194

Query: 289 VNP 291
           + P
Sbjct: 195 IEP 197


>gi|320590682|gb|EFX03125.1| 20S cyclosome subunit [Grosmannia clavigera kw1407]
          Length = 885

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 98/299 (32%), Gaps = 14/299 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L +G +++A      A    S + + H  ++   V     +       Y  A      + 
Sbjct: 560 LGSGYLALAQFQCSEALVAFSSLPRAH--NDTPWVQAQMGRAQYELAAYAEAETCFRRVR 617

Query: 148 QIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            +  TR     VYS      +     S    A + +D +  +     A+   + LA++  
Sbjct: 618 VLAPTRLDDMEVYSTILWFLKRETDLS--FLAHELVDAAWTSAQAWCALGNAWSLAQDHE 675

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +A+    +  +   ++    A     +  E+    +   +     +++        A   
Sbjct: 676 QALRCFRRATQLKPKF----AYAYTLQGHEHVLNEEYDKALTAYRQAVAADRRHYNAYYG 731

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINK 322
             +         KA         ++P   +       + E        L+  ++  ++  
Sbjct: 732 IGRVYEKLGNFDKAYEHYHIASVIHPTNAVLICCIGKVLERQKQIVPALQYFIKATDLAP 791

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380
            + ++    ++  L +G +  A  + M+   IAP    +  LL ++ +  +  +  + +
Sbjct: 792 RAAQTRFRKARALLALGQLQAAQQELMILKDIAPDEAAVHFLLGKLYKTLNDKSAAVRH 850


>gi|317477616|ref|ZP_07936834.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
 gi|316906221|gb|EFV27957.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
          Length = 283

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 32/189 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
               LA+  +S V      + E L  L+   I + +R+Y +A    E +L++        
Sbjct: 108 GRNNLAQADYSLVLDLEKNNEEAL--LMRAYIYMQQREYKMAKADYERLLKVNPASYNGR 165

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     + G    A R                                      K K+
Sbjct: 166 LGLATLEQKEGKHEDALRILNNMFA------------------------------AKGKD 195

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A+      A+L +AR+    D   M  +  D  E+++L  +     +   +  ++Q KK 
Sbjct: 196 AQLSPSQYAMLYVARAGVEKDLKHMDMALVDLEEAIRLDSSQPDIYLMRGEIYLAQKKKD 255

Query: 278 KAEVILEKI 286
            A+   EK 
Sbjct: 256 LAKRDFEKA 264


>gi|307261203|ref|ZP_07542878.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306868934|gb|EFN00736.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 391

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 83/271 (30%), Gaps = 30/271 (11%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     M+L  P     
Sbjct: 84  GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDI----------SPDAPWVTEAVVQQYVLAKEWS 205
           ++  L     +  +   A   A K + I               +         +  ++  
Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIESDTDKIPLSHYYCEYAQA------IKNEDLD 197

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
             ++ L++  + + +  R   +L      +N  +     +  +    L+   + I   I 
Sbjct: 198 GHLSALSKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIE 253

Query: 266 AAKS-LISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEI 320
             K+  +++N     E+ L +  ++  H    ++A   Y            K   +L + 
Sbjct: 254 KIKACYMAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQY 312

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                    I  +  +      +A    ML 
Sbjct: 313 PSMITFHRFIHYQ--INEAEEGRAKESLMLL 341


>gi|288959495|ref|YP_003449836.1| TPR domain protein [Azospirillum sp. B510]
 gi|288911803|dbj|BAI73292.1| TPR domain protein [Azospirillum sp. B510]
          Length = 588

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 6/143 (4%)

Query: 153 REFAVYSLYFESCRIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           R   ++     + +     + A      ALD+   AP +   +        E   A    
Sbjct: 143 RLPELHGNLGNALKAQSRLDEAADCFRAALDLRAQAPEMHHFLAATLRELGELEEAERHF 202

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                 A ++      +  + +   +  G +  +  +    L      + A +  A  L 
Sbjct: 203 RIALDQAPDY----LDVHYSLAELLSTGGRLEEAEAEFRVVLAAAPRFVPAQVGLAHVLQ 258

Query: 272 SQNKKRKAEVILEKIWKVNP-HP 293
           S ++  +A  ++E   +  P HP
Sbjct: 259 SLDRAGEAIEVIESAREQAPDHP 281


>gi|256017302|ref|ZP_05431167.1| hypothetical protein ShiD9_00205 [Shigella sp. D9]
 gi|323944606|gb|EGB40674.1| tetratricopeptide [Escherichia coli H120]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|227887581|ref|ZP_04005386.1| tetratricopeptide repeat protein [Escherichia coli 83972]
 gi|300982249|ref|ZP_07175960.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|301047184|ref|ZP_07194276.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|227835931|gb|EEJ46397.1| tetratricopeptide repeat protein [Escherichia coli 83972]
 gi|300300861|gb|EFJ57246.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|300408803|gb|EFJ92341.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|307554567|gb|ADN47342.1| tetratricopeptide repeat protein [Escherichia coli ABU 83972]
 gi|315292479|gb|EFU51831.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|215487893|ref|YP_002330324.1| hypothetical protein E2348C_2826 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965463|ref|ZP_07779695.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
 gi|215265965|emb|CAS10374.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|312289883|gb|EFR17771.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|260811293|ref|XP_002600357.1| hypothetical protein BRAFLDRAFT_66590 [Branchiostoma floridae]
 gi|229285643|gb|EEN56369.1| hypothetical protein BRAFLDRAFT_66590 [Branchiostoma floridae]
          Length = 1567

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 78/257 (30%), Gaps = 48/257 (18%)

Query: 151  ATREFAVYSLYFESCRIGDLNSAQ------RYATKAL----DISPDAPWVTEAVVQQYVL 200
            +T+   +  L      +GD   A         A +AL       P+       +      
Sbjct: 871  STKATLLQHLGKAWQNLGDHTKALFYFDLSHVAFQALHHPITEHPNIATSRNFMGTSCCN 930

Query: 201  AKEWSRAITFLNQKKKNAK------EWNRNRAILLIARSLENADKGDMIASY---HDAIE 251
               +  AI++L +     K        N + ++ L    L     GD   +      A+E
Sbjct: 931  LGNYKEAISYLTEALNMLKNFYGHNTANDHISVALNCLGLTFEKLGDYKKALGYFEQALE 990

Query: 252  SLKL---CDNSIMASIC--AAKSLISQNKKRKAEVILEKIW--------KVNPHPEIA-- 296
              +      +  +A++    A  L  + + +KA   +E+          +   H +IA  
Sbjct: 991  MTRRIHRSPHREIATLLNNIALVLKEKGEIKKAISCIEEALDMRKRLFGENTAHLDIANS 1050

Query: 297  -----NIYTHLLSENTV-----GKLKRALRLEEINKESVESLVIVSKIALEMG--SIDQA 344
                 + Y  L             LK    +        E   ++  + + +   +  QA
Sbjct: 1051 LNALGSTYHELRDGQKAVFYKKQALKMFRVIYGETAVHPEIADVLVNLGISLNYINDPQA 1110

Query: 345  HAKAMLAMKIAPRKEIF 361
                   +++   + I+
Sbjct: 1111 MTYGEQGLEM--TRRIY 1125


>gi|163784399|ref|ZP_02179288.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880330|gb|EDP73945.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 202

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 2/121 (1%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           ++G+L+ AQ Y  KA+  +P+       +       K++  A  +  +  KN    N+ +
Sbjct: 80  KVGELDKAQEYFLKAIQTNPEKAESYVNLGILLAKKKDYGSAKNYFKKAIKNPNYKNKEK 139

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A      +L     G++        +++   +  + A        + Q+K  +A+ + EK
Sbjct: 140 AY--YNLALVYLKLGNLKRYEESLKKAIAYNNFFLPAYEELGNYYMQQDKYDQAKRLYEK 197

Query: 286 I 286
            
Sbjct: 198 A 198


>gi|74316402|ref|YP_314142.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74055897|gb|AAZ96337.1| hypothetical protein containing TPR repeat [Thiobacillus
           denitrificans ATCC 25259]
          Length = 592

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 73/278 (26%), Gaps = 10/278 (3%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           E L+  L  ++A       IA      + +       A  +    +    D   A     
Sbjct: 73  ELLLKFLVAEVAGQRGAIGIAQTTYLDLARQTRDPRVAQRAAEVSAFAR-DPAGALEATR 131

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
              +   D+    + +    +     + A   L    +           L +A ++    
Sbjct: 132 LWAEADKDSLRAQQTLAALLLSEGRLAEAEPVLRALLQEKPA----EGFLHLAAAIGKMR 187

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIA 296
             D  A+                A    A++  S  +   A   L+K   + P   P   
Sbjct: 188 --DSAAALELVRRLAADHPQLPEAQFAIAQAAASAGQFDTALAALQKADSLRPGWEPGAL 245

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                L   +    L         + ++ E  +  ++  +      +A A+     +  P
Sbjct: 246 LHAQILARTSNAAALAFMRTFLAEHGDAREVRLAYARTLVSANQFTEARAEFARLTRDFP 305

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393
           R     L A +      + D         L     DP 
Sbjct: 306 RNAEVSLAAGLLSLQLGDLDAAHALLTQTLEYNPRDPD 343


>gi|46581341|ref|YP_012149.1| TPR domain/response regulator receiver domain-containing protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120601481|ref|YP_965881.1| response regulator receiver [Desulfovibrio vulgaris DP4]
 gi|46450763|gb|AAS97409.1| TPR domain protein/response regulator receiver domain protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120561710|gb|ABM27454.1| response regulator receiver [Desulfovibrio vulgaris DP4]
 gi|311235000|gb|ADP87854.1| response regulator receiver [Desulfovibrio vulgaris RCH1]
          Length = 451

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 16/248 (6%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           YL+  +      + + A E  E   +        +  L      +G+     RY  +   
Sbjct: 193 YLVMGEAYQHLGKLDKARECYEEASRNAELYLEPLRRLADIHGEMGEPTEQLRYLERLDQ 252

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +SP        +   ++      +A    +   + A     +    +  R     +  D 
Sbjct: 253 LSPLNVERKVDMGAIHLELGNQEKADELFDTAVQQATREALSYIADISGRIAGIYNGRDP 312

Query: 243 IASYHDAIESLKLCDNSIMASIC-----AAKSLISQNKKRKAEVILEKIWKVNPHPE--- 294
             + H    +L    + + AS          +L  Q K ++A     K  +V P  E   
Sbjct: 313 QRAEHFLRRALDAKGDMLDASDLDTFNRLGIALRRQGKWQEALTEYHKALRVAPEDENLF 372

Query: 295 --IANIYTHLLSENTVGKLKRALRLEEINKE----SVESLVIVSKIALEMGSIDQAHAKA 348
             +         +    +      L  IN E           +  + +  G  + A    
Sbjct: 373 YNMGMACAEGR-DFREARANMLKALT-INPELPRRDPVMAYNIGLVFMRAGGREYAERCL 430

Query: 349 MLAMKIAP 356
            +A+++ P
Sbjct: 431 NIALELDP 438



 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 13/173 (7%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           LI ++ E   +           + L+L   S    +   ++     K  KA    E+  +
Sbjct: 159 LIDQAREFVHQNLPEQGIKLCRQILELKPGSAAGYLVMGEAYQHLGKLDKARECYEEASR 218

Query: 289 VN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                  P   +A+I  H        +L+   RL++++  +VE  V +  I LE+G+ ++
Sbjct: 219 NAELYLEPLRRLADI--HGEMGEPTEQLRYLERLDQLSPLNVERKVDMGAIHLELGNQEK 276

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQA-----NSHNTDKILYWTQSALHAMPD 391
           A      A++ A R+     +A I        N  +  +  ++ + AL A  D
Sbjct: 277 ADELFDTAVQQATRE-ALSYIADISGRIAGIYNGRDPQRAEHFLRRALDAKGD 328



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 54/183 (29%), Gaps = 15/183 (8%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAER--QYNIAHEKLEM- 145
           G + +   N   A ++     QQ T   E L Y+  +  +IA          A   L   
Sbjct: 265 GAIHLELGNQEKADELFDTAVQQAT--REALSYIADISGRIAGIYNGRDPQRAEHFLRRA 322

Query: 146 ------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                 ML       F    +     R G    A     KAL ++P+   +   +     
Sbjct: 323 LDAKGDMLDASDLDTFNRLGIAL--RRQGKWQEALTEYHKALRVAPEDENLFYNMGMACA 380

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             +++  A   + +      E  R   ++     L     G    +      +L+L    
Sbjct: 381 EGRDFREARANMLKALTINPELPRRDPVMAYNIGLVFMRAGGREYAERCLNIALELDPGF 440

Query: 260 IMA 262
             A
Sbjct: 441 TKA 443


>gi|191168879|ref|ZP_03030651.1| tetratricopeptide repeat protein [Escherichia coli B7A]
 gi|293446903|ref|ZP_06663325.1| yphG protein [Escherichia coli B088]
 gi|309794403|ref|ZP_07688826.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|331669297|ref|ZP_08370145.1| putative tetratricopeptide repeat protein [Escherichia coli TA271]
 gi|331678542|ref|ZP_08379217.1| putative tetratricopeptide repeat protein [Escherichia coli H591]
 gi|190901085|gb|EDV60862.1| tetratricopeptide repeat protein [Escherichia coli B7A]
 gi|291323733|gb|EFE63161.1| yphG protein [Escherichia coli B088]
 gi|308121859|gb|EFO59121.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|331064491|gb|EGI36402.1| putative tetratricopeptide repeat protein [Escherichia coli TA271]
 gi|331075002|gb|EGI46322.1| putative tetratricopeptide repeat protein [Escherichia coli H591]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|300817680|ref|ZP_07097895.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|300529668|gb|EFK50730.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|302307823|ref|NP_984579.2| AEL281Cp [Ashbya gossypii ATCC 10895]
 gi|299789186|gb|AAS52403.2| AEL281Cp [Ashbya gossypii ATCC 10895]
          Length = 1390

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 3/118 (2%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             + E  +  L+I ++   A   L       G + ++ +   +AL++SP+  +    +  
Sbjct: 677 AESIEWFQSALRIDSSDVEAWIGLGQAYAACGRIEASIKVFERALELSPEHKYAGLFLAI 736

Query: 197 QYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                 E+ +++  L +   K      +    +  L+  +L+  D+G +I +   A E
Sbjct: 737 SLCQLSEFEKSLEALRKLVNKYPQEAIFKERLSATLVEHALQFFDQGYLIKAATCAAE 794


>gi|297530018|ref|YP_003671293.1| hypothetical protein GC56T3_1717 [Geobacillus sp. C56-T3]
 gi|297253270|gb|ADI26716.1| TPR repeat-containing protein [Geobacillus sp. C56-T3]
          Length = 1385

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 91/298 (30%), Gaps = 25/298 (8%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY-SLYF 162
           K    + +        L + L  +IA    +Y  A       LQ  P   E   Y  L  
Sbjct: 545 KAEDVLKRVKGKAQSPLYHYLRGRIAFFASRYEEAARYFRTSLQLDPDQPEVWSYFGLA- 603

Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            S   G +      +  A+ + P          V+  +V    ++ A  + ++  +    
Sbjct: 604 -SAYAGHIEKGLISSRVAVSLYPGDLFIETNHGVLLFHVKR--FAEARAWFDRLVRR--- 657

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             R  A L   R+  + + G    +      +  L        +  A        + KA+
Sbjct: 658 -ERRDAQLWYERARCDRELGRRRKAERGFCVAKALDPQEPYPYLMLADLYDDDGDREKAK 716

Query: 281 VILEK----IWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            +LE+     W++ P +  + ++Y  +        +         + + V + + ++   
Sbjct: 717 AVLEEGLAVAWRLAPLYVRLGDLY--MEEGEAEQAVSCYEEAIRHDSDDVFAHLGLAAAL 774

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ---IEQA---NSHNTDKILYWTQSALH 387
            E G ++ A    +           + L A    I           +  L W +  L 
Sbjct: 775 AERGDVEAARRYVIKQHTRFANNSEYWLNAGKWLIAHGFADEEEGRETALSWLEEGLR 832



 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 120  YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
             L      ++  +  ++  A ++ E  L+   +     + L       G+      +  +
Sbjct: 905  PLSLFRLAELCASLGRHEEAKQQYETCLKADPSFVLCHFRLAALYEAEGNEERQHTHLLQ 964

Query: 180  ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            A+ ++P         ++Q     E S  +  L   + +A E     ++  +  +L   D+
Sbjct: 965  AVRLAPK-----RVDMEQLAAIAEPSALLRALADARPHAGEAWYYDSLGYVYGALGRRDQ 1019

Query: 240  GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IA 296
                       ++L L  +        A  L+ + ++++A  +LE++     HP+   + 
Sbjct: 1020 EKA-----AVEKALALDPDHHEVLRHWAMVLMGEGRQKEAVKLLEQLMVR--HPDDEPLY 1072

Query: 297  NIYTHLLSENTVGKLKRALRLEEIN 321
             +Y  L  +   G  K   RLE + 
Sbjct: 1073 PLYVALFPKTMRGLGKLRHRLERLK 1097


>gi|282880691|ref|ZP_06289393.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305417|gb|EFA97475.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
          Length = 473

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 83/240 (34%), Gaps = 23/240 (9%)

Query: 137 NIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             A +  E++        +E     L       GD   ++R   K +D +P +      +
Sbjct: 155 MKAEDWFELLKSKTDDDCQELKGRILLGL----GDYEESERIFQKLIDKNPYSVDYWTDL 210

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                +   +S AIT                ++ +I ++    + G+   +    +   +
Sbjct: 211 ASLQAINDRFSDAITSCEYAIAINP----KNSLAIIIKANSLFNLGNFEEALKYYLAYQQ 266

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE-IANIYTHL--------LS 304
           L  N +        S +  ++  KA   L++  + N   PE +A IY ++          
Sbjct: 267 LDPNDVTIDGLIGVSYLQLDQPAKALAHLKRAEQQNQVTPESLAEIYENIALTLSHLGKM 326

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           +  +  + +   LE ++ E +   +    I LE   ++ A      A++  P    +  L
Sbjct: 327 DEALSYVDKMQNLECMDMEDI--KLTKGHILLENDQVEAAQEIFQEAIRQ-PNASTYTAL 383


>gi|226226814|ref|YP_002760920.1| hypothetical protein GAU_1408 [Gemmatimonas aurantiaca T-27]
 gi|226090005|dbj|BAH38450.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 918

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 35/256 (13%)

Query: 146 MLQIPATRE----FAV----YSLYFESCRI-------GDLNSAQRYATKALDISPDAPWV 190
           M+  P          +       + E+          G+     ++A   LD+       
Sbjct: 267 MVVDPDGALARYGLGLAFRQRGYFREARAEFERAIVHGEDERLVQHALAELDLIDGNSAG 326

Query: 191 TEAVVQQYVLAKE----WSR---AITFLNQKKKNAKEWNR------NRAILLIARSLENA 237
            +A  +  +  +E    W+    A+         A  + R        A+      +  A
Sbjct: 327 AQARYEHLLAEQESARWWNEHGVALHQGGNVASAADSYRRALRIDPRDALAYNNLGVALA 386

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           D+GD  A+      S +L    + A    A  L    +   A  +L +   V  HP  A 
Sbjct: 387 DRGDTNAAREALTRSAELDPTFVRARRNLACLLSWNGEGLAALDLLRE--LVEFHPRDAE 444

Query: 298 IYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +  +       E  +   +  ++  E++    E+   ++ +   +G  D A  +   A+
Sbjct: 445 AWHAIGLVFVSLERLIDAREAFVKAIELHARHAEARFALADVLDRLGDQDGAARETEQAL 504

Query: 353 KIAPRKEIFLLLAQIE 368
            I+P +    L   IE
Sbjct: 505 VISPVRADARLTVGIE 520



 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 49/197 (24%), Gaps = 9/197 (4%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN----EYLVYLLEVQIALAERQYNIAHEK 142
           AL    +   +     A +  S  +             L++              +A   
Sbjct: 654 ALTAASLGDGSGETADADRHASRHTLLRLLKQDVMSPALLHFAGDVSLQIA-DRTLALGF 712

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
               L     R     ++       GDL +A+     AL ++P        + + +  A 
Sbjct: 713 YRRALSRDPMRPTPRVAIARLLREQGDLLAARLEIVAALAVAPGWREARLELARLHRDAA 772

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               A   L     +         I L   +     +     +       L+   +   A
Sbjct: 773 RLDEARLVLVTCLADVPT----DLIALELLAGVLVAEERDDDARVVVDRLLRHDPSRSAA 828

Query: 263 SICAAKSLISQNKKRKA 279
                  L  Q + R A
Sbjct: 829 LWFDGVLLARQARMRDA 845



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 45/158 (28%), Gaps = 4/158 (2%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             +A    SY         + L Y             N A E L    ++  T   A  +
Sbjct: 355 GNVASAADSYRRALRIDPRDALAYNNLGVALADRGDTNAAREALTRSAELDPTFVRARRN 414

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G+  +A     + ++  P       A+   +V  +    A     +      
Sbjct: 415 LACLLSWNGEGLAALDLLRELVEFHPRDAEAWHAIGLVFVSLERLIDAREAFVKAI---- 470

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           E +   A    A +      GD   +  +  ++L +  
Sbjct: 471 ELHARHAEARFALADVLDRLGDQDGAARETEQALVISP 508


>gi|255578208|ref|XP_002529972.1| zinc finger protein, putative [Ricinus communis]
 gi|223530534|gb|EEF32415.1| zinc finger protein, putative [Ricinus communis]
          Length = 223

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 2  LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYR---TSPFVILSILYFFLFAWILL 58
          L+++ Y  +  L++   + +S+Y   V ITWG +L R    S      I+ F +   +LL
Sbjct: 12 LKVLGYLMI--LLVAGIVALSYYA-VVIITWGPQLLRGGGHSFLAFSLIILFHILLVMLL 68

Query: 59 FAVSRFFLSCPAML-FHMLHKRNYDKG 84
          ++  R     P  +  +   +     G
Sbjct: 69 WSYFRVVFKDPGSVPENWRQENLEGGG 95


>gi|218463823|ref|ZP_03503914.1| probable adenylate cyclase protein [Rhizobium etli Kim 5]
          Length = 590

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 72/202 (35%), Gaps = 24/202 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAV-----VQQYVLAKEWSRA----ITFLNQKKKNAKEWNR 223
           A++   +A+++ P+       +     +        WS +    I    +    A   + 
Sbjct: 364 ARKLLQRAVELDPNFASAHAFLALTHGLDYL---NRWSESPQRSIEQAEEAATLAVARDD 420

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +  +   A S+         ++  +A  ++ L  N     +   ++LI   +  +A    
Sbjct: 421 SDPVAHWALSVVKLYTRQHDSAISEAARAIVLNPNFAEGQVSLGEALIYSGRSGEALAYF 480

Query: 284 EKIWKVNPH-PE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           ++   +NP+ P+       +A        E     L+R  R    N  +  S  +++   
Sbjct: 481 DRARVLNPYFPDVVLHFQALALFQLRRYEEAVEPLLQRVNR----NPVTDVSRALLAACY 536

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
             +G  ++A A+    +++ P 
Sbjct: 537 GHLGRFEEARARWQEVLRVNPD 558


>gi|182438044|ref|YP_001825763.1| hypothetical protein SGR_4251 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326778687|ref|ZP_08237952.1| Tetratricopeptide TPR_2 repeat-containing protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|117676062|dbj|BAF36653.1| hypothetical protein [Streptomyces griseus]
 gi|178466560|dbj|BAG21080.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326659020|gb|EGE43866.1| Tetratricopeptide TPR_2 repeat-containing protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 801

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 82/266 (30%), Gaps = 13/266 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
              P A         + T  +     ++         + + A       + +    E A 
Sbjct: 528 GPRPTAALGLLLTRAELTDTDRAAALVVRAWDRFRAGELDAALSDHGRAIAVDPRSERAH 587

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                    +G    A     +A +I+P   W      + Y      + A+T L++    
Sbjct: 588 QGRAVILRSLGRHEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLAEALTVLDRA--- 644

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               + + A+ L +R L     G    +  D   ++ L      A +  ++         
Sbjct: 645 -HALDPSDAVPLGSRGLVRHALGRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPV 703

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIV 331
            A   L++  +++P       E   +Y         V    RAL L   + +   +    
Sbjct: 704 GALADLDRAEELSPGQAGTEGERGEVYRATDRPGEAVACYDRALAL---DPDYAWAYGSR 760

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           +     +G + +A A    A+++ P 
Sbjct: 761 ALALEALGRVPEALADLDRALELDPD 786


>gi|94971629|ref|YP_593677.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553679|gb|ABF43603.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 722

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 23/229 (10%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           ++    V         YL  L ++Q     +     +A E+ E ++++  T       L 
Sbjct: 142 KRDPKNVDAHRLLGRIYLRSLGDMQSGNNQSRDMQRLAIEQYEEIVKLDPTSVEDHLLLG 201

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                  DL  A++    A+ I PD+      +   Y    +  +A   L     +    
Sbjct: 202 RLYSYSNDLTKAEKEFKTAVQIQPDSEEAVTMLAYLYTQEGDTKKAQEVL-----SNIPD 256

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE- 280
           +   A L         ++ D   +     +++ L   ++ +    A++L++  +   A  
Sbjct: 257 DDRSAKLYSTLGYTYEEQKDYKKAIEAYRKAVMLDKENLDSVRGLAQNLLNDGQLDAALE 316

Query: 281 --VILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRALRLEE 319
              I+     V+  P  A  Y H+          E  +  LK+A  L +
Sbjct: 317 QYKII-----VDQDPSDAQSYQHIAEIDRRNGKFEAALDALKKASALVQ 360



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 37/263 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               ++ Y  A E     + +      +V  L       G L++A       +D  P   
Sbjct: 270 TYEEQKDYKKAIEAYRKAVMLDKENLDSVRGLAQNLLNDGQLDAALEQYKIIVDQDPSDA 329

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              + + +      ++  A+  L +     ++++E   N A++   +     D  + I  
Sbjct: 330 QSYQHIAEIDRRNGKFEAALDALKKASALVQDSQEIPYNMAVIYEGQGR-YEDAINTIQQ 388

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LS 304
                +      +          S  S ++  ++   LE+         + NIY      
Sbjct: 389 LLTKTD----KPD---------ASYSSADRSNRSI-FLER---------LGNIYREANKP 425

Query: 305 ENTVGKLKRALRLEEINKESVESLVI--VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +  V   +R + L     +   S     + +   +      A A A    K  P+     
Sbjct: 426 QQAVETFRRMIALG----DDPASRAYQEMVETYRDNRDWPSATAAAQEGAKKLPKDRGLQ 481

Query: 363 LLAQIEQANSHNTDKILYWTQSA 385
           L+     A   +  K       A
Sbjct: 482 LVLA---AQLADEGKADQALSIA 501


>gi|301022083|ref|ZP_07186010.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
 gi|299881388|gb|EFI89599.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 663


>gi|329663548|ref|NP_001192789.1| tetratricopeptide repeat protein 13 [Bos taurus]
 gi|297491376|ref|XP_002698831.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1 [Bos
           taurus]
 gi|296472256|gb|DAA14371.1| tetratricopeptide repeat domain 13 isoform 1 [Bos taurus]
          Length = 858

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 154 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 213

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 214 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 266

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 267 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 325

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 326 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNE 383

Query: 360 IFLLL 364
           +   +
Sbjct: 384 VCQYM 388


>gi|83858829|ref|ZP_00952351.1| flagellin modification protein FlmG [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853652|gb|EAP91504.1| flagellin modification protein FlmG [Oceanicaulis alexandrii
           HTCC2633]
          Length = 600

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 67/164 (40%), Gaps = 12/164 (7%)

Query: 205 SRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNS 259
             A T + +     K+  +    +AI L+ R+++  D     A+    +  +++ +   S
Sbjct: 28  EAASTEVQRALSSAKSKDDNLPPKAIGLLKRAMKIVDDDRAAAAKAAKLCLDAVDIAPES 87

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRAL 315
            +A+   A  L    +  KA    E+ W+ NPH   + IY +L       + +   ++ L
Sbjct: 88  SLANHALAICLERLGRLAKALQFYERAWQFNPHN--SEIYLNLAMLAWKLDMLPAAEKFL 145

Query: 316 RL-EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           RL  ++       ++ +S +  + G  + +      A+   P +
Sbjct: 146 RLFVQMAPNHPAGVINLSGVLRDQGKFEDSIEILRAAIYANPEE 189


>gi|307944215|ref|ZP_07659556.1| putative tetratricopeptide repeat protein [Roseibium sp. TrichSKD4]
 gi|307772561|gb|EFO31781.1| putative tetratricopeptide repeat protein [Roseibium sp. TrichSKD4]
          Length = 263

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+GD  +A + A+KA  ++P +     A+ + Y   ++   AI         A E    
Sbjct: 81  LRLGDKTAAYKMASKATALAPKSSQSHIALGEVYAEQEKHDLAIQSYETALTYAPE---- 136

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
              LL   S  +   GD   +     E+L+    +  A + AA     QN+
Sbjct: 137 NVSLLAILSRHHRKLGDTAKADSMLSEALERDSQNPDALVEAASVEGWQNQ 187


>gi|196229070|ref|ZP_03127936.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196227351|gb|EDY21855.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 508

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 12/184 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G L  A+    + L  +P       A+         W  AI  L +        + N
Sbjct: 17  QQAGRLTEAETTYRQILTAAPHFLRAWVALGSTLSAMGRWPEAIKVLERTL----TLDPN 72

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           R  +       +A  G    +     ++L L  N        A  L+ Q++  +A    +
Sbjct: 73  RPEIHFNLGNNHAKSGQWEPAIASFRKALVLRPNCAQTCTNLAGVLLEQDRLDEAIAHFQ 132

Query: 285 KIWKVNP----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +   ++P    H  +   YT     E  +   +RAL L     +   +   ++   +  G
Sbjct: 133 RALTLHPAAEMHYNLGVAYTRAARGEEAIACFRRALAL---RPDYANAHWALAPELMRRG 189

Query: 340 SIDQ 343
             ++
Sbjct: 190 HYEE 193


>gi|160888700|ref|ZP_02069703.1| hypothetical protein BACUNI_01118 [Bacteroides uniformis ATCC 8492]
 gi|317479554|ref|ZP_07938682.1| tetratricopeptide [Bacteroides sp. 4_1_36]
 gi|156861599|gb|EDO55030.1| hypothetical protein BACUNI_01118 [Bacteroides uniformis ATCC 8492]
 gi|316904284|gb|EFV26110.1| tetratricopeptide [Bacteroides sp. 4_1_36]
          Length = 283

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 31/189 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
               LAR  +S V    + + E L  L+   I + +R YN A    E +L++        
Sbjct: 108 GKDDLARIDYSLVLDIESDNQEAL--LMRAYIYMRQRNYNFAKSDYERLLKLAPQSYNGR 165

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     + G   +A       +                               +  + 
Sbjct: 166 LGLATLEQKEGKYEAALSILNAMIA-----------------------------EKGGEA 196

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
            +   +  A+L +AR+    D   +  +  D  E++KL  +   A +   +  +SQ KK 
Sbjct: 197 TRLTTQQYAVLYVARAGVEQDMKHVDLAMMDLEEAIKLDASQTEAYLIRGQIYLSQKKKE 256

Query: 278 KAEVILEKI 286
            A+   EK 
Sbjct: 257 LAKRDFEKA 265


>gi|156936307|ref|YP_001440223.1| cellulose synthase subunit BcsC [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156534561|gb|ABU79387.1| hypothetical protein ESA_04207 [Cronobacter sakazakii ATCC BAA-894]
          Length = 1167

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 9/159 (5%)

Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R              + +   + L     A        A  + + +L      E A   L
Sbjct: 584 RDSGQEAQAIALLRQQPVSDRIDLTLADWAQQRGDNATARAQYQTVLTRSPASEEARLGL 643

Query: 161 YFESCRIGDLNSAQ-RYAT---KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QK 214
                  GD  +A+ + A     A    P +P     +        + +RA         
Sbjct: 644 AEVLIAQGDNAAAREQLAALQTPAAGGEPRSPGTQRRIANAEAALGDTARAQQAFAVLAA 703

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +  ++  A++L   +      G    +     +++
Sbjct: 704 TAKTQPPSQESALVLRDAARFQRQNGQPQQALQTYRDAM 742



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 14/162 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                    Q   A   L                L   + + GD  +A+      L  SP
Sbjct: 579 TANRLRDSGQEAQAIALLRQQPVSDRIDLT----LADWAQQRGDNATARAQYQTVLTRSP 634

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSLENADKG 240
            +      + +  +   + + A   L   +  A           R I     +L +  + 
Sbjct: 635 ASEEARLGLAEVLIAQGDNAAAREQLAALQTPAAGGEPRSPGTQRRIANAEAALGDTARA 694

Query: 241 DMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKA 279
               +   A    K    S  +++    AA+      + ++A
Sbjct: 695 QQAFAVLAATA--KTQPPSQESALVLRDAARFQRQNGQPQQA 734


>gi|126725849|ref|ZP_01741691.1| hypothetical protein RB2150_06573 [Rhodobacterales bacterium
           HTCC2150]
 gi|126705053|gb|EBA04144.1| hypothetical protein RB2150_06573 [Rhodobacterales bacterium
           HTCC2150]
          Length = 650

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 30/244 (12%)

Query: 160 LYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK---------EWSRAI 208
           L       + G + +A+      LD  P      + + +    +          + +  I
Sbjct: 7   LMLAKKMAKNGQIEAARDLFQSVLDKFPKNRRAIDGLKKLPANSGAGGSGIPKIQLNGLI 66

Query: 209 TFLN---------QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              N         Q  K ++ + R   +  +  +           +  +  +SL L   S
Sbjct: 67  QLFNDGNFQTVVKQALKLSQIYPREAPLFGLLGAS-FLRLNQHDEAVSNYEKSLNLNLTS 125

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314
               +    +LI  ++  +A   L+ +   NP     H  +   Y   +        K  
Sbjct: 126 TELKVSLGYALIKADRAFEAIEKLKAVVDENPNFEHAHLNLGLAYKATIEFELAQ--KCF 183

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE--IFLLLAQIEQANS 372
            ++ +IN +S + L  ++ I  ++   D A      AM++APR+    +     +E+A  
Sbjct: 184 EKVHQINPKSTDGLFNLANILAQIDDFDAADRTYEKAMELAPRRADIAYNRAHALERAGR 243

Query: 373 HNTD 376
           +   
Sbjct: 244 YEAA 247



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 8/161 (4%)

Query: 102 LARKMHSYVSQQHTFHNE----YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            A +    + +     +E       +L       A  ++ +A +  E + QI       +
Sbjct: 138 KADRAFEAIEKLKAVVDENPNFEHAHLNLGLAYKATIEFELAQKCFEKVHQINPKSTDGL 197

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           ++L     +I D ++A R   KA++++P    +          A  +  A+ F     K 
Sbjct: 198 FNLANILAQIDDFDAADRTYEKAMELAPRRADIAYNRAHALERAGRYEAALEF----YKI 253

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +   N N+A  L   ++ +  +G+   +      +L +  +
Sbjct: 254 SLNINPNQASALNNIAVIHKMQGNKKEARRSFESALTIAPD 294


>gi|62737789|gb|AAX98205.1| transcriptional regulator [Streptomyces aizunensis]
          Length = 998

 Score = 41.5 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 13/130 (10%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            R G L  A+R A +ALD  P   W         A+++      +   A   L++     
Sbjct: 679 LRRGHLVEARRLAEQALDQLPPHGWGVGIGMPLSALIEARTAMGDHEAAAELLDRPVPED 738

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-------DNSIMASICAAKSLI 271
               R+    L AR       G   A+  D     +L           +   +  A++ +
Sbjct: 739 MLTTRHGLHYLYARGRHQLATGRHHAALTDFTACGELMRRWGMDRSTLVPWRVGVAEARL 798

Query: 272 SQNKKRKAEV 281
           +   + +AE 
Sbjct: 799 ALGSREEAER 808


>gi|332707755|ref|ZP_08427782.1| NB-ARC domain protein [Lyngbya majuscula 3L]
 gi|332353458|gb|EGJ32971.1| NB-ARC domain protein [Lyngbya majuscula 3L]
          Length = 1255

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 34/274 (12%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAV 157
            +   A   H   +   ++    L   L  Q   A     N ++    +    P       
Sbjct: 840  DAARALTDHKDRAHALSYLAPQLSENLLPQALEAARGITNESNRAHALSALAP------- 892

Query: 158  YSLYFESCRIGDLNSAQRY------ATKALDISPDAPWVTEAVVQQ----YVLAKEWSRA 207
               +        L +A+        A     ++P  P +    ++         + W   
Sbjct: 893  ---HLPKILSEALEAARAITDPWNRANALCQLAPYLPEILPEALELIGAIRSKIQHWDSG 949

Query: 208  ITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKL-CDNSIMASI 264
            IT LN+  K +        +   L++++LE A           A+  + L     +  ++
Sbjct: 950  ITILNESGKASILRKLAPYLSKKLLSQALEVAQSIADDKDRVYALSEIALHLPEILPEAL 1009

Query: 265  CAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKE 323
              A+S+   + + +A+ +++      P  PEI      +  E T     RA  L E+   
Sbjct: 1010 KVAQSI--THNQDRADALIKLA----PQMPEILPEALEMAREFT-DPWNRANALIELAPY 1062

Query: 324  SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              ESL   +  A    +I     +A   +++AP 
Sbjct: 1063 LPESLFPQALEA--AAAITDPWNRANALIELAPY 1094


>gi|298530763|ref|ZP_07018165.1| response regulator receiver protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510137|gb|EFI34041.1| response regulator receiver protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 384

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 70/210 (33%), Gaps = 19/210 (9%)

Query: 97  AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE- 154
           A  I  AR +    +S  H        + L+ ++   E+ +  A   L   L+I      
Sbjct: 181 AGEIKRARAVVEQALSINHLLGK---AWFLKAELEKEEQNWQEARASLNRALEIQPRNAD 237

Query: 155 ----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                    LY E     D   A+    +A++I+P+  W+       Y+       A   
Sbjct: 238 YFLCLGDTLLYLE-----DNMKARESFQRAMNIAPEEDWIKTRTWDIYLKHDLCREAEAS 292

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                 N    +     +L   ++    KG+M  +      +LK   ++      AA S 
Sbjct: 293 FGSLLINCLSSD-----VLNNYAVALRKKGEMARAVELYAVALKKDPDNPGLLFNAAVSD 347

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
                 R+A   LE+  ++ P    A  + 
Sbjct: 348 YYNGNFRRAVNRLERAIELQPGFAQAEAFL 377


>gi|163732373|ref|ZP_02139819.1| adenylate cyclase cya3 (Sinorhizobium meliloti) [Roseobacter
           litoralis Och 149]
 gi|161394671|gb|EDQ18994.1| adenylate cyclase cya3 (Sinorhizobium meliloti) [Roseobacter
           litoralis Och 149]
          Length = 588

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 79/235 (33%), Gaps = 13/235 (5%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-----ITFLNQKKKN 217
                   +SA +   +A+ I PD           +     W        +  L+  +  
Sbjct: 351 HKFTQEARDSALKLLDEAIKIDPDYAEAHGVAAYCHQQRYLWGGCDPQDRLASLHHAEAV 410

Query: 218 AKEWNRNRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           A+    +   L   A +L   D    +A+   A  +L L  NS +A IC +  +    K 
Sbjct: 411 AEGRTDDATPLSFAAMALSALDNQHEVAATMLAR-ALDLSPNSALALICRSLVMTILGKP 469

Query: 277 RKAEVILEKIWKVNP-----H-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
            K  V   +  +++P     H PE       L   ++   +  A R  + N         
Sbjct: 470 EKGAVDAAQSLRLSPFDPLRHIPECVLAIAMLAVGHSKEAVDHARRAVDANPMFTPGRAT 529

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           ++   +E   ID+A       +  AP   I  L  ++   N    D++    + A
Sbjct: 530 LALCLVEDERIDEAADVMRTVLAKAPDTRISNLHERLLIVNGLGFDRVSAAMRLA 584



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 31/233 (13%)

Query: 99  NIPLARKMHSYVSQQHTF-----HNEYLVYLLEVQIALAERQYNIAHEK-LEMMLQIPAT 152
           +   A  + +Y  QQ          + L  L   + A+AE + + A       M      
Sbjct: 374 DYAEAHGVAAYCHQQRYLWGGCDPQDRLASLHHAE-AVAEGRTDDATPLSFAAMA----- 427

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWSRAIT 209
                      +       +A   A  ALD+SP++         V+      +    A+ 
Sbjct: 428 ---------LSALDNQHEVAATMLAR-ALDLSPNSALALICRSLVMTILGKPE--KGAVD 475

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               +      ++  R I     ++     G    +   A  ++             A  
Sbjct: 476 A--AQSLRLSPFDPLRHIPECVLAIAMLAVGHSKEAVDHARRAVDANPMFTPGRATLALC 533

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEI 320
           L+   +  +A  ++  +    P   I+N++    +++     ++  A+RL  +
Sbjct: 534 LVEDERIDEAADVMRTVLAKAPDTRISNLHERLLIVNGLGFDRVSAAMRLAGL 586


>gi|222053544|ref|YP_002535906.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221562833|gb|ACM18805.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 657

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----PHP 293
           +  M A   +   ++KL  + ++A +C  K+L    +  +A   L    ++N     PH 
Sbjct: 517 REKMEAGLKELRTAIKLRPDYLLAHVCLGKTLSDLKQFDEATTELLTAARLNPNSPLPHI 576

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +   Y     E T  +          +    E+ + + K+  + G++  A A+   +  
Sbjct: 577 FLGESY-ENRGEFTNAR-NEYTTAIAADPTHPEAHLRLGKLHAKEGNLPDAIAELEKSYL 634

Query: 354 IAPRK 358
           + P +
Sbjct: 635 VYPNE 639


>gi|62180273|ref|YP_216690.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127906|gb|AAX65609.1| putative N-acetylglucosaminyl transferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|322714747|gb|EFZ06318.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 389

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 17/164 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
            + + A    + +++        R  AV  L        D  +A  Y  A    +   D 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136

Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242
                   + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM
Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +     +      NS   SI   +  +++    KA   L+++
Sbjct: 197 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240


>gi|89095333|ref|ZP_01168251.1| type IV pilus biogenesis protein PilF [Oceanospirillum sp. MED92]
 gi|89080408|gb|EAR59662.1| type IV pilus biogenesis protein PilF [Oceanospirillum sp. MED92]
          Length = 244

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 2/152 (1%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            L       A    +  L I +    A   L       GD   A++Y  KA  + P +  
Sbjct: 33  YLQTGDVVNAKTSFKRALDINSGYADAYNGLALAFQLEGDPGIAEQYYRKATSLDPSSAM 92

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +           K +  A   L++  ++     R +A   + R  +N  + D  A+ H  
Sbjct: 93  IHNNFGAFLFSEKRYEEACRELSRATEDPFYNRRAQAFENLGRCYQNLQRTD--AAKHAF 150

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             SL++  N  +A +  +  LI++    +A  
Sbjct: 151 QRSLQVTSNRPVALVELSDLLIAEGNYPEANK 182


>gi|328948042|ref|YP_004365379.1| hypothetical protein Tresu_1170 [Treponema succinifaciens DSM 2489]
 gi|328448366|gb|AEB14082.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           succinifaciens DSM 2489]
          Length = 1134

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 54/176 (30%), Gaps = 13/176 (7%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +  E   + P         L  ++    +  SA+ +   A    P        + +  
Sbjct: 728 AEKSFEKSKEEPNVMFI----LGMDALEKHNYASAENFLRNATKKEPGNSTYFYQLGRVL 783

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
            + K+++ ++       K    +    A             G    +      ++K+  +
Sbjct: 784 AMQKKYNESLAAFQTSIKINGNF----APAHYNSGFVCEKLGKNKEALASYRNAIKIKPD 839

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVG 309
              A + A   L  +    +A     +  K+NP       E+ + Y+ L + +   
Sbjct: 840 YENAFMGAGHILAEEKNYSEAVKSYSEAVKINPSRAQTYQELGSCYSELKNYSLAE 895


>gi|320200113|gb|EFW74702.1| hypothetical protein ECoL_02951 [Escherichia coli EC4100B]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|315646851|ref|ZP_07899966.1| TPR domain protein [Paenibacillus vortex V453]
 gi|315277781|gb|EFU41105.1| TPR domain protein [Paenibacillus vortex V453]
          Length = 865

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           +  A  S        G++  A+ +  +A  I P+ P +   + +  +    W  A     
Sbjct: 221 QFLAARSNAQICLVQGNVEGAEHWLREAAQIMPEEPDLNRMIGELCLQYSNWEEAFQAFK 280

Query: 213 QKKKNA-KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           + + +   E + N  +      L   +      +Y    + L    +   A   AA+ L 
Sbjct: 281 RMEASGNAEVHHNSDLAYCMLQLGMLED-----AYSMYQKVLVHTPDDAQALTGAAQCLE 335

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-----RALRLEEINKESVE 326
              + +++  +  +I ++ P     +++ H   +    +L+     R     E   + ++
Sbjct: 336 QLGRIKESRELYLRIKQLCP----WDLHAHTQIDTLNQRLEQQMKMRLE--VEDRPDQMK 389

Query: 327 SLVIVSKIALEMGSIDQA 344
           +L  ++ + +E    DQA
Sbjct: 390 TLDELAGLYMEQQQYDQA 407


>gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 323

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 13/204 (6%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                E    GD   A     +A+ I  ++          Y L  E+ +AIT LN+  + 
Sbjct: 74  RG--VEKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAITDLNRAIEI 131

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A  ++         R       GD+  +  D  +++ +  N  +A      + + Q   +
Sbjct: 132 APNFDP----AYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQQENIQ 187

Query: 278 KAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A     +  ++N  P +   Y       L        +    R   +N    +      
Sbjct: 188 EAITDFNQALEIN--PNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYSNRG 245

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
            + L+   +  A A    A++I P
Sbjct: 246 FVHLQQNDLQTALADLNQALEINP 269



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 48/153 (31%), Gaps = 4/153 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A       + I      A     F   +  ++  A     +AL+I+P+       
Sbjct: 150 GDLEGAISDFTKAIDINPNLALAYNGRGFAHLQQENIQEAITDFNQALEINPNLVLAYNN 209

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                +   ++  AI   N+       +    A     R   +  + D+  +  D  ++L
Sbjct: 210 RANARLEQGKFKEAIADFNRAIAVNPNY----AQGYSNRGFVHLQQNDLQTALADLNQAL 265

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           ++  N   A      + +  + + +A    +K 
Sbjct: 266 EINPNYAQAYYHRGLTHVQLSNEEEAIADFQKA 298



 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 21/189 (11%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                   ++GDL  A    TKA+DI+P+           ++  +    AIT  NQ  + 
Sbjct: 142 RGFAR--LQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQQENIQEAITDFNQALEI 199

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                    +    R+    ++G    +  D   ++ +  N            + QN  +
Sbjct: 200 NPNL----VLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYSNRGFVHLQQNDLQ 255

Query: 278 KAEVILEKIWKVNPHPEIANIYTH--------LLSENTVGKLKRALRLEEINKESVESLV 329
            A   L +  ++N  P  A  Y H           E  +   ++A  L     +     +
Sbjct: 256 TALADLNQALEIN--PNYAQAYYHRGLTHVQLSNEEEAIADFQKAADLSRQQGD-----M 308

Query: 330 IVSKIALEM 338
            + + AL+ 
Sbjct: 309 TIYQNALDQ 317


>gi|167589230|ref|ZP_02381618.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ubonensis Bu]
          Length = 760

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 82/281 (29%), Gaps = 28/281 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYA 177
            L          +   A    E + +        T    +      +C++G   +     
Sbjct: 7   QLDAALAHHQAGRLADARVLYEAIRRSEPDQPDATHFLGL-----LACQLGRFPAGIALM 61

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +++ +  D  ++                AI    +      ++    A           
Sbjct: 62  ERSIALRADPVYLNNFG-NMLRAHGRLDDAIASYRRAVALKPDY----AEAHSNLGNALR 116

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           D GD  A+     ++L L  +   A      +L  Q++   A    +K   + P    A 
Sbjct: 117 DAGDPHAAMLSCAQALALRPDYAQAFNNLGNALRDQDELDAAARAYDKAIALEP----AY 172

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              H    N      R        + +VE    + +  L +G++     +   A++   R
Sbjct: 173 ADAHYNRGNVFRAQGRLDDAVRCYRRAVELQPDLHQAHLNLGNVLFERDELEPAIESLTR 232

Query: 358 KE-------IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                       L A  ++A   + ++     + A+ A PD
Sbjct: 233 ASQGGSVEAFLNLAAAFDRA--GDLERAAASLRRAIAATPD 271



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 74/239 (30%), Gaps = 12/239 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A       + +      A  +L       GD ++A     +AL + PD       
Sbjct: 85  GRLDDAIASYRRAVALKPDYAEAHSNLGNALRDAGDPHAAMLSCAQALALRPDYAQAFNN 144

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        E   A    ++       +    A     R      +G +  +      ++
Sbjct: 145 LGNALRDQDELDAAARAYDKAIALEPAY----ADAHYNRGNVFRAQGRLDDAVRCYRRAV 200

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS-ENTVG 309
           +L  +   A +     L  +++   A   L +  +   V     +A  +      E    
Sbjct: 201 ELQPDLHQAHLNLGNVLFERDELEPAIESLTRASQGGSVEAFLNLAAAFDRAGDLERAAA 260

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQI 367
            L+RA        +  E    ++++ +  G   +A     +A+ +      +  + A+I
Sbjct: 261 SLRRA---IAATPDRAELHHHLAQVLVRQGKRPEALESCRIALALPGQTAHMHTVSAEI 316


>gi|316973855|gb|EFV57404.1| putative tetratricopeptide repeat-containing domain protein
           [Trichinella spiralis]
          Length = 1062

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 75/234 (32%), Gaps = 11/234 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + +Y+       N  +V+     +   +   ++A +  +  +++      A  +L   
Sbjct: 188 RAVSAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANA 247

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G +  A+     AL++ P        +            A     +  +   E+  
Sbjct: 248 LKEKGFVAEAEECYNTALNLCPQHADSLNNLANIKREQGFIEEATRLYIKALEIFPEF-- 305

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A      +     +G +  +     E++++      A      +L   N    A    
Sbjct: 306 --AAAHSNLASILQQQGRLTEAILHYKEAIRIAPTFADAYSNMGNTLKEMNDITGAMQCY 363

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
            +  ++NP     H  +A+I  H  S N    ++      ++  +  ++   ++
Sbjct: 364 SRAIQINPAFADAHSNLASI--HKDSGNVPDAIQAYRTALKLKPDFPDAFCNLA 415



 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
             +  A + ++        H + L  L    I   +     A     + +   P     A
Sbjct: 252 GFVAEAEECYNTALNLCPQHADSLNNL--ANIKREQGFIEEATRLYIKALEIFPEF-AAA 308

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L     + G L  A  +  +A+ I+P        +        + + A+   ++  +
Sbjct: 309 HSNLASILQQQGRLTEAILHYKEAIRIAPTFADAYSNMGNTLKEMNDITGAMQCYSRAIQ 368

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 369 INPAF----ADAHSNLASIHKDSGNVPDAIQAYRTALKLKPDFPDAFCNLAHCL 418


>gi|289192214|ref|YP_003458155.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938664|gb|ADC69419.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 635

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 6/128 (4%)

Query: 134 RQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-APWV 190
             Y+ A E  E  L       +   +  L        + + A  Y  KAL+  P    W 
Sbjct: 17  GDYDKAIECFERALDECPEEGKWITLKCLALCYRLKENYDKAIEYFKKALEKCPKDKKWE 76

Query: 191 TEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y    E+ RAI +  +  +   +  + R  + +     N    D   +    
Sbjct: 77  ILEDLGVCYYSKGEYGRAIEYFEKALELCPDEEKWRIWISLGDCYYNIR--DYDKAIDYY 134

Query: 250 IESLKLCD 257
            ++LK+C 
Sbjct: 135 KKALKMCP 142


>gi|209526253|ref|ZP_03274783.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209493350|gb|EDZ93675.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 431

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 60/197 (30%), Gaps = 11/197 (5%)

Query: 126 EVQIALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDI 183
           + +      Q   A +   + +   P   E      +     +      A     KA+ I
Sbjct: 241 QAEKLFLSNQLESAVDAYNQALKLEPNLAEVWNNRGVVLTKLKR--YQEAIASYEKAIQI 298

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             D P               +  AI   ++      ++    A     ++L N ++ D  
Sbjct: 299 RTDYPDAWSNRGVALGKLNYYQAAIFSYDRALALKPDY--LDAWNNRGQALMNLEQYD-- 354

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +     ++ K+  N        A+       +  A   L++  ++N  P+    +    
Sbjct: 355 EAIASYNQAAKIRPNFYKIWYNKARCYALTGNRELAIENLKRALRIN--PDAVQKFAQQE 412

Query: 304 SENT-VGKLKRALRLEE 319
            +   + + +R  +L +
Sbjct: 413 PDFAGICQEQRFQQLLK 429


>gi|157162026|ref|YP_001459344.1| TPR repeat-containing protein [Escherichia coli HS]
 gi|157067706|gb|ABV06961.1| tetratricopeptide repeat protein [Escherichia coli HS]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|156034555|ref|XP_001585696.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980]
 gi|154698616|gb|EDN98354.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 471

 Score = 41.5 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A +W +AI    +      E +  +      R+  N        +  DA ++++L  N 
Sbjct: 20  AAHDWPKAIELYTKAI----ELDDQKPTYYSNRAQANIKSEAYGYAIADATKAIELDPNF 75

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           + A    A +  +  K ++A    + + K  P
Sbjct: 76  VKAYYRRAVAYTAILKSKEALRDFKTVVKKAP 107


>gi|331674000|ref|ZP_08374763.1| putative tetratricopeptide repeat protein [Escherichia coli TA280]
 gi|331069273|gb|EGI40665.1| putative tetratricopeptide repeat protein [Escherichia coli TA280]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|307313880|ref|ZP_07593496.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli W]
 gi|306906381|gb|EFN36896.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli W]
 gi|315061868|gb|ADT76195.1| conserved protein [Escherichia coli W]
 gi|323377551|gb|ADX49819.1| Tetratricopeptide TPR_1 repeat-containing protein [Escherichia coli
           KO11]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|218555073|ref|YP_002387986.1| hypothetical protein ECIAI1_2602 [Escherichia coli IAI1]
 gi|218361841|emb|CAQ99441.1| conserved hypothetical protein [Escherichia coli IAI1]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|218780011|ref|YP_002431329.1| hypothetical protein Dalk_2168 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761395|gb|ACL03861.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 639

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 4/144 (2%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E  R G    A  +   A+++ P   ++     +  +       A     +  K+    
Sbjct: 460 QELKRKGFYEEALLHHAIAINLRPREKYIWHPYYEVLIDMGRLDEAEAIAQKAVKDFP-- 517

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A      ++  + +     S  +  +++ L  +S +    AA     +N+  KA  
Sbjct: 518 --QDAQAHNNLAIILSARDKAEQSLAEFEKAVALDPHSTIMRENAADEYARRNQPEKAVH 575

Query: 282 ILEKIWKVNPHPEIANIYTHLLSE 305
            L +  K++P   I ++   +  E
Sbjct: 576 HLREALKISPRTAILHLRLAIELE 599



 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A    +  ++       A  +L            +     KA+ + P +  + E 
Sbjct: 500 GRLDEAEAIAQKAVKDFPQDAQAHNNLAIILSARDKAEQSLAEFEKAVALDPHSTIMREN 559

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
              +Y    +  +A+  L +  K +       AIL +  ++E    GD+  + H   E+ 
Sbjct: 560 AADEYARRNQPEKAVHHLREALKISP----RTAILHLRLAIELEKLGDVSRAIHHYKEAK 615

Query: 254 KLCDNSI 260
           +     +
Sbjct: 616 RYNPTFV 622


>gi|134094645|ref|YP_001099720.1| putative response receiver protein [Herminiimonas arsenicoxydans]
          Length = 468

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 63/159 (39%), Gaps = 9/159 (5%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +  K+ + AI   ++  K   +W  +   +L  ++    + G    +    +++L L  
Sbjct: 70  RLQKKDLAGAIAECDRVLKIEPKWIVD---ILKTKAGAALELGQNDEARRSYLQALGLRQ 126

Query: 258 NSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           + + A +  A+   ++ +  +A    + +LEK  +     ++         E+    L+ 
Sbjct: 127 DLVWAKLGLARCDQAEGRLEEAKIIVQGVLEKNAQYVDAYDLLAQIAESRGED-QQVLEA 185

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   +   +  S + V   A  +G ++QA +    A+
Sbjct: 186 LNKSYNVIPSARRSRM-VGDAAYRVGDLEQARSAYDKAL 223


>gi|53804652|ref|YP_113528.1| TPR domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53758413|gb|AAU92704.1| TPR domain protein [Methylococcus capsulatus str. Bath]
          Length = 586

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 5/168 (2%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A L  A +L  A++G+   +  +  E+LKL  +   A +  A+ +        A  ++++
Sbjct: 197 ADLHFAAALLAANQGEFQQALSETEEALKLHPDWGRARVLQAQVMAQMGDSATAGDLIQR 256

Query: 286 IWKVNPHPE-IANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             K +P    +  IY+   + S +  G  +   R+      + ++   +    +++G +D
Sbjct: 257 ALKRDPDNARLRLIYSQFLIKSGDIEGARRELERIVAKEPGNQDARFGLGLALIDLGRLD 316

Query: 343 QAHAK-AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
            A  + A LA     R + +  L  I  A     ++ L W        
Sbjct: 317 AARREFAALAASEKWRVQAYFYLGLI-DARKGRLNEALDWFDRVTTGP 363


>gi|54308912|ref|YP_129932.1| hypothetical protein PBPRA1723 [Photobacterium profundum SS9]
 gi|46913342|emb|CAG20130.1| hypothetical protein PBPRA1723 [Photobacterium profundum SS9]
          Length = 1261

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 57/255 (22%)

Query: 137 NIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALD------------- 182
             A +    M   P          +     R G+   A  +  KAL+             
Sbjct: 329 AAARQLQYAMTTRPNDPEILG--GMGKVYLRWGNQTKALVFFKKALENDNDPDNQSKWKS 386

Query: 183 -ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            I   + W       +Y   K++SRA   L +K K  +  N      L   +     KG+
Sbjct: 387 LIDTSSYWAFVDQGDKYTEKKQYSRAER-LYKKAKALQPNN---PYTLNRLAELYGIKGN 442

Query: 242 MIASYHDAIESLKLCDNSIMASICAAK--SLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
              +    I++LK   +S+ ++    +   L+SQNK  +A               +A+ Y
Sbjct: 443 YKEADRYYIQALKR--DSLNSTALRGRIDLLLSQNKSDQAIR-------------LADTY 487

Query: 300 THLLSENTVGKLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +     +   ++ +      +++++NKE         + AL  G    A  K    + + 
Sbjct: 488 S-----SKQKRIVKVKVNELKIDQLNKE--------VQAALLAGDNPLASQKVEALLLLK 534

Query: 356 PRKEIFLLLAQIEQA 370
           P      L A I  A
Sbjct: 535 PT--SAWLRADIADA 547


>gi|332092617|gb|EGI97689.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|320176150|gb|EFW51217.1| hypothetical protein SDB_01395 [Shigella dysenteriae CDC 74-1112]
          Length = 1090

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 515 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 574

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 575 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 629


>gi|119493200|ref|ZP_01624075.1| hypothetical protein L8106_15774 [Lyngbya sp. PCC 8106]
 gi|119452765|gb|EAW33942.1| hypothetical protein L8106_15774 [Lyngbya sp. PCC 8106]
          Length = 200

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 15/196 (7%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +  E  R G L+ A     KA++ +P   W    + +          AI       + A 
Sbjct: 6   IANERLRAGKLDEAVVAYQKAIEENPCFSWAYHNLAEALTQQGRLEEAIV----AYRQAI 61

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           + N   A      +     +G    +     ++ ++       +  A    +SQ +++  
Sbjct: 62  QLNPQSAWTYHNLAAVLTQQGLSTEAIAVYQKATEINPEFSSKTFFADHHKLSQEQQQ-- 119

Query: 280 EVILEKIWKVNPHPEIANIY------THLLSE--NTVGKLKRALRLEEINKESVESLVIV 331
             I+E   ++   PE A  Y        ++ +    V   +R + L+      +E    +
Sbjct: 120 AKIIEYRDRIQKQPEQAEFYHVLGQLLQIVGQRTEAVACFQRYIELQGDAV-HLEFYRNL 178

Query: 332 SKIALEMGSIDQAHAK 347
            +  L+     +   +
Sbjct: 179 GEALLDKTQFPEDRQQ 194


>gi|58584258|ref|YP_203274.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428852|gb|AAW77889.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 900

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 7/118 (5%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R RA L   R L+   +     +     E+LKL  +  +A+         Q +  ++  
Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRADFALAANNLGFVYFRQGRSAESAR 841

Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            LE   K++P   +A     + Y      +     K      E+  +   +    +++
Sbjct: 842 RLETTLKIDPSRAVAYLNLGDAYAE--GGDREKARKAYSTYLELQPQVSGAAQARAQL 897


>gi|291283774|ref|YP_003500592.1| hypothetical protein G2583_3079 [Escherichia coli O55:H7 str.
           CB9615]
 gi|209763058|gb|ACI79841.1| hypothetical protein ECs3415 [Escherichia coli]
 gi|209763064|gb|ACI79844.1| hypothetical protein ECs3415 [Escherichia coli]
 gi|290763647|gb|ADD57608.1| hypothetical protein G2583_3079 [Escherichia coli O55:H7 str.
           CB9615]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|148695062|gb|EDL27009.1| mCG129388 [Mus musculus]
          Length = 1245

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 46/338 (13%), Positives = 104/338 (30%), Gaps = 75/338 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIA--------------HEK 142
                A K+      + +   E L V +    +ALA+   + A               E 
Sbjct: 575 GEQHEAAKVLQDAIHEFSGTCEELRVTIANADLALAQGDTDRALSMLRNVTTEQPYFIEA 634

Query: 143 LEMMLQI----------------------PATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            E M  I                      P+ R F +         I +   A     +A
Sbjct: 635 KEKMADIYLKHRKEKMLYITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQA 692

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----------------WNRN 224
           L+ +P    +   + +  V    +S+AIT+     K+ ++                + + 
Sbjct: 693 LNQNPKDGTLARKIGKALVKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKA 752

Query: 225 RAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +L  + + E   +    M+      + +         +   AA     + + R    I
Sbjct: 753 EKVLQHSLAHEPVSELSALMVDGRSQVLLAKVYSKMERPSDAIAALQQARELQAR----I 808

Query: 283 LEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVI 330
           L+++    P       H   A I   +   +   +  ++A+          E+    ++ 
Sbjct: 809 LKRVQMEQPDAVPSQKHFA-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLE 867

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
           ++++ L    +D +     L ++     +   +L+A +
Sbjct: 868 LAQLYLAQEDLDASLRHCALLLQRDQDNEPATMLMADL 905


>gi|67904274|ref|XP_682393.1| hypothetical protein AN9124.2 [Aspergillus nidulans FGSC A4]
 gi|40742767|gb|EAA61957.1| hypothetical protein AN9124.2 [Aspergillus nidulans FGSC A4]
 gi|259485460|tpe|CBF82501.1| TPA: heat shock protein (Sti1), putative (AFU_orthologue;
           AFUA_7G01860) [Aspergillus nidulans FGSC A4]
          Length = 575

 Score = 41.5 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 43/153 (28%), Gaps = 16/153 (10%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                   + A E     L    T      + +             A+  A K   I P 
Sbjct: 336 AYEKLGDLDKAIENYNKSLTEHRTPDALTKLRN----------AEKARDKAKKEAYIDPV 385

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  + Q+     +W  A+    +  K A +  R        R+           + 
Sbjct: 386 EAEKARELGQKKFQEADWPGAVDAFTEMTKRAPDDPRG----YSNRAAALIKLMAFPQAV 441

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            D  E+++       A I  +++L +  +  +A
Sbjct: 442 QDCDEAIRCDPKFFRAYIRKSQALAAMKEYSRA 474


>gi|209920027|ref|YP_002294111.1| hypothetical protein ECSE_2836 [Escherichia coli SE11]
 gi|209913286|dbj|BAG78360.1| conserved hypothetical protein [Escherichia coli SE11]
          Length = 1124

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|218778927|ref|YP_002430245.1| hypothetical protein Dalk_1074 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760311|gb|ACL02777.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 647

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 32/217 (14%)

Query: 174 QRYATKAL-DISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRAIL 228
            +   +AL  I P    +   + + Y    ++  A    +  L   +KN  + +   A L
Sbjct: 62  LKIKEEALGKIHPGVGEICNNIGRLYRKQGKYQEAESFYLRALEITEKNLGDAHPQAAAL 121

Query: 229 -----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAE 280
                ++  +L    + + +      I    L ++    +      A     Q+K  +AE
Sbjct: 122 CNNLAVLYHALGKYAQAEPLFMRALEIREKALGEDHPDVAQTCSNLALLYQDQDKYSQAE 181

Query: 281 VILEKIWKVN------PHPEIANIYTHLLS-------ENTVGKLK------RALRLEEIN 321
            ++++  K+        HP+ A +Y  L          +    L+      R   L + +
Sbjct: 182 HLIKRALKIEVNALGEDHPDTAAVYNILSGLYSSQGKYDQAEPLQLRVLKIREKVLGKNH 241

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            +   +   ++++    G  D+A    + A++I    
Sbjct: 242 PDYATACNNLAELYRMQGKYDKAEPLYIQALEIRETA 278


>gi|218767984|ref|YP_002342496.1| putative periplasmic protein [Neisseria meningitidis Z2491]
 gi|121051992|emb|CAM08301.1| putative periplasmic protein [Neisseria meningitidis Z2491]
 gi|325137744|gb|EGC60319.1| tetratricopeptide repeat protein [Neisseria meningitidis ES14902]
          Length = 612

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 63/315 (20%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            P        A W+   + ++          +  L +    A E    R  LL+A++   
Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288
            D     AS      +L+     +  +  A      Q +++ KA   L+++ K       
Sbjct: 183 QDGLAQKASKAVRRAALRY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240

Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320
                       +PEI + +                 +++  ++ +L     R   L E 
Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374
           N  +     +  + A+   +  +  +      + A       ++    + A +  A+  +
Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 356

Query: 375 TDKILYWTQSALHAM 389
             K+  W +  + A 
Sbjct: 357 YTKVRQWLKK-VSAP 370


>gi|320196385|gb|EFW71009.1| hypothetical protein EcoM_01778 [Escherichia coli WV_060327]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|315300528|gb|EFU59757.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|320108751|ref|YP_004184341.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319927272|gb|ADV84347.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
           saanensis SP1PR4]
          Length = 761

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 56/373 (15%), Positives = 115/373 (30%), Gaps = 46/373 (12%)

Query: 4   LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL-----L 58
              +  ++  V+    +V  +     +T       T   + ++I+    +AW       +
Sbjct: 360 FFSFPGLMLAVVWGMWLVLQH----VMTTEKLRTLTPILIGVAIVLLCGYAWGAHVRNRV 415

Query: 59  FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118
           +           +            G   +  GL  +   + P A +  +   Q    + 
Sbjct: 416 WKTEESLWLDDVIKSSHN-------GRGLMIYGLTQMNKGDYPTALEYFTKALQYTPNYA 468

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF-AVYSLYFESCRIGDLNSAQRY 176
              + L  V   +     + A E     ML  P   +  A Y  +      G+    +  
Sbjct: 469 TLEINLGVVHGVM--GHRSEAEEHFRRAMLLTPNDDQVHAFYGRWLL----GEERIPEAL 522

Query: 177 ATK--ALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN------QKKKNAKEWNRN 224
           A +  A+ ++P      + ++       + +     AI  L         +   ++ +  
Sbjct: 523 AEEQRAVALNPQRSIQRDLLLTVLSRTGDEASLRQAAIETLAIIPEDATARAFLQQAHPT 582

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A   +  SL    +G    S   A  +L        A      +  +  +   A     
Sbjct: 583 NATDALNLSLAQYRQGQYAQSLESAQRALVFDPKMAEAYNNIGAAYGAMGRWDDAVANEI 642

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQ 343
           K  ++NP  +IA     +  +      KRA         SV + +I   +AL   G   +
Sbjct: 643 KALQINPELDIAKNNLAIFQQ------KRA---ATTGPPSVVADLINRSMALNQAGKFAE 693

Query: 344 AHAKAMLAMKIAP 356
           +   A  A+K+ P
Sbjct: 694 SIDTARQALKLDP 706



 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 38/116 (32%), Gaps = 19/116 (16%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----------FLNQKK 215
           R G    +   A +AL   P        +   Y     W  A+            L+  K
Sbjct: 596 RQGQYAQSLESAQRALVFDPKMAEAYNNIGAAYGAMGRWDDAVANEIKALQINPELDIAK 655

Query: 216 KNAKEWNRNRAIL---------LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            N   + + RA           LI RS+     G    S   A ++LKL  NS +A
Sbjct: 656 NNLAIFQQKRAATTGPPSVVADLINRSMALNQAGKFAESIDTARQALKLDPNSALA 711


>gi|303327039|ref|ZP_07357481.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863027|gb|EFL85959.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 579

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 86/233 (36%), Gaps = 20/233 (8%)

Query: 160 LYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKK 216
           LY E+    G            L   PD+      +    V +K+++ A   LN    K+
Sbjct: 134 LYAEALMEHGMPERGVTLMRVYLQKHPDSLDARLELALLLVKSKQFTEAEKLLNSIPAKQ 193

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +   +   A  LI  + +N        +     +++K   + + A    A     + + 
Sbjct: 194 RSPLVDYYHARALIGMARQN-------DAVPYLQKAVKEMPDFVEALAELAFIHEQRGEL 246

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK---RALRLEEINKESVESLVIVSK 333
           R+A  + EK+ K+N     +     L   N   +LK   +AL+   +   +V   + V+ 
Sbjct: 247 REARTVYEKLIKLN----FSTQDVALRLVNISLRLKQPEKALQYMRLGPATVPFKLTVAS 302

Query: 334 IALEMGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQANSHNTDKILYWTQS 384
           + ++     QA +     +    AP + ++LLLA +      +    L W   
Sbjct: 303 MFMDSRHYLQAESLLKQIVADGGAPGE-VYLLLADLTYEQRRDLPMALSWLDK 354


>gi|239787437|emb|CAX83909.1| TPR repeat protein [uncultured bacterium]
          Length = 663

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 50/214 (23%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE------ 141
           L  GL  +    +  A      V       +E  V LL   +A     ++ A        
Sbjct: 7   LRQGLAHLEQGELEQAAARFDAV--LQMVPDEPEVLLLAAMVAEQRGNFSQALSWLGRGL 64

Query: 142 ---------------KLEMMLQIPATRE------------------FAVYSLYFESCRIG 168
                           L+ + ++   RE                    +      +   G
Sbjct: 65  VRSPGDPRLHLKMGVVLKALKRVEPARERFLEAAELNPEDCEPHLQLGL-----LAQESG 119

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D   A  +  +AL ++PD P     +   +    E + A +   Q     KE  R    L
Sbjct: 120 DDRGAVAHYQRALALAPDLPEAHFNLGCAWQSLGENASAESCFEQVLLVKKEHERAHYNL 179

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            I R  +    G    +  D   + ++      A
Sbjct: 180 GIIRQGD----GRNGQAVEDFATACRIRPGYAKA 209



 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDP 392
             LE G ++QA A+    +++ P +   LLLA +      N  + L W    L  +  DP
Sbjct: 12  AHLEQGELEQAAARFDAVLQMVPDEPEVLLLAAMVAEQRGNFSQALSWLGRGLVRSPGDP 71


>gi|226290243|gb|EEH45727.1| pre-mRNA-splicing factor CLF1 [Paracoccidioides brasiliensis Pb18]
          Length = 677

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185
             A    +  + ++P  +  A++  Y    +  GD              +Y  + +  +P
Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKENP 318

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239
               +    V+    + +  R      +              R    L I  +L E  + 
Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378

Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            DM  ++    E ++L            +  A+  I Q   + A   L       P  ++
Sbjct: 379 KDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              Y  L     E    + K   +  E +  + ++ +  +++   +  ID+A A   L +
Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497


>gi|145615460|ref|XP_001414541.1| hypothetical protein MGG_13130 [Magnaporthe oryzae 70-15]
 gi|145022282|gb|EDK06302.1| hypothetical protein MGG_13130 [Magnaporthe oryzae 70-15]
          Length = 2231

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 67/246 (27%), Gaps = 41/246 (16%)

Query: 144  EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            E M          + +L  E+ R      A  Y      +        EA++      ++
Sbjct: 1194 EFMEHDDKALPIDIRTLGREAARCHAYAKALHYKELEF-LQDHNGGAVEALIVINNQLQQ 1252

Query: 204  WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
               AI  L + +          A+ L     E  ++ D    +++  E       S+   
Sbjct: 1253 SDAAIGILRKAQSY------QDALHLKETWFEKLERWDEALEFYNKREKETPAGTSVPVE 1306

Query: 264  ICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
            +     + L +  +           W       +A +     S ++    +R   L    
Sbjct: 1307 VIMGKMRCLHALGE-----------WDT-----LAQLAGATWSNSSSELQRRFAPLATT- 1349

Query: 322  KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
                         A  +G  D   A      + +P +  F  +  I +      + +  W
Sbjct: 1350 ------------AAWGLGKWDSMDAYLQSMKRTSPDRSFFQAILAIHRNQFG--EAVR-W 1394

Query: 382  TQSALH 387
               A  
Sbjct: 1395 IDQARE 1400


>gi|78223239|ref|YP_384986.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
 gi|78194494|gb|ABB32261.1| TPR repeat protein [Geobacter metallireducens GS-15]
          Length = 883

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 81/236 (34%), Gaps = 16/236 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +    + A   A + +++     +    +   Y+       A+  LN+      E    
Sbjct: 340 LQQKRTDDAITEAKRVIELDDKNAFAHNVLGSAYIAKGMTDEAVRELNRAI----ELEPK 395

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
                + + + N  +G       +   ++K+  + + +    A   +  NK+ +A  +L 
Sbjct: 396 LVGAHMKKGIVNLARGKRAEGEEELETAVKVAPDVLNSRYLLASYYMRLNKQARAIEVLR 455

Query: 285 KIWK--VNPHPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
              +      P      A  +     ++ +  L++A  +++     + +   ++   +  
Sbjct: 456 AGLRGGKQDAPLYNTMAAAAFADKREKDGILYLQKAREVDQA---YLPASFNLASYYISK 512

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPL 393
               +A       +K  P     L+ L  I ++     + + Y+T+    A  DP+
Sbjct: 513 KDNGRAAGLFNEILKRDPANLKALIGLGAISESEGKAQEAVAYYTK--AKATKDPV 566



 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 81/225 (36%), Gaps = 7/225 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              N A   L+  ++       A Y L      +G    A++   KAL  +P  P +   
Sbjct: 38  GNANGAIVLLKNAVEKDQNYFDARYKLAKAYMTVGKFEQAEKEFQKALRQNPSNPEIRLD 97

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + + Y    +   +I     K   +       A+ +I  S       D    Y    ESL
Sbjct: 98  LAKLYNSINKPDESIA--EAKAYLSARAGSADALEVIGTSYGQKKMFDEAEKYLK--ESL 153

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGK 310
           +       A +  AK  ++  ++++   +L +I + +P    A     +      N+   
Sbjct: 154 QAEPARASAMLQLAKVYLATKREQEGMGLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKA 213

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           L+   ++ + + +   +   +  + +  G +D+A   A   ++ A
Sbjct: 214 LEYYQKIMQADPDDANAAFRIGMMHISKGEVDKAERLADDLIRKA 258



 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 72/221 (32%), Gaps = 16/221 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATRE---FAVYSLYFESCRIGDLNSAQRYATK 179
           +L+   I  +++ Y+ A   +   + +         A+  +Y E  R  D   A      
Sbjct: 668 HLVIASIYESQKDYDRAISAVRSGIAVEPGNLRASMALGGIY-EKKR--DFARAIAAYDD 724

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L  +P       A    +  + +   A        K A ++      L    +      
Sbjct: 725 ILRKNPKNIPALFAKGAAFDQSGKKKEAAGIYRAVLKIAPDFVPALNNLAYLAAEGY--- 781

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294
           G+   +   A  + KL  N+         +L+   K+  +  +LEK   + P     H  
Sbjct: 782 GNKSEALSLASRANKLQPNNAGVMDTYGYALLINGKRTASVRVLEKAVSLLPNNPAVHYH 841

Query: 295 IANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKI 334
           +A  Y   + +     +     L      ES  +  +++++
Sbjct: 842 LAMAYRD-MGDRAKASVSVQKSLQYGEFPESAAARKLLAEL 881



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 86/262 (32%), Gaps = 13/262 (4%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +   A  + + + ++   + + L+ L    I+ +E +   A                   
Sbjct: 514 DNGRAAGLFNEILKRDPANLKALIGL--GAISESEGKAQEAVAYYTKAKATKDP--VGYL 569

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           SL     R  +   A   A + L  +P+   + E         K+++ A+   ++ +K A
Sbjct: 570 SLASYYIRKKEAPKALALANEGLKGAPNNAALLELKGGLLAADKKYAEALKVYDELEKVA 629

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                 RAI L   +L      ++  +   A + +     S    +  A    SQ    +
Sbjct: 630 PT----RAIPLKIGALVV--TKNIPKAVEQAQKVVAANPKSAAGHLVIASIYESQKDYDR 683

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVG---KLKRALRLEEINKESVESLVIVSKIA 335
           A   +     V P    A++    + E        +     +   N +++ +L       
Sbjct: 684 AISAVRSGIAVEPGNLRASMALGGIYEKKRDFARAIAAYDDILRKNPKNIPALFAKGAAF 743

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
            + G   +A       +KIAP 
Sbjct: 744 DQSGKKKEAAGIYRAVLKIAPD 765


>gi|313157559|gb|EFR56977.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 594

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 9/142 (6%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A   A +A  +     W  + + Q  + A+ +  A+    ++ + A   N +   LL
Sbjct: 88  PDEAVELARRAYRLDTTNKWYHQFLGQALIFAQRYPEALGV-YKRLRAADPQNPDNYRLL 146

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEK 285
            A   +       IA+   A             S    + LIS  +  KA      ++E 
Sbjct: 147 AALYEQVQQPYSAIATLDSAELRFGRIPML---SAMKRQLLISTRQLDKAVDEAKAMVEA 203

Query: 286 I-WKVNPHPEIANIYTHLLSEN 306
             ++   H  +A++Y  L  ++
Sbjct: 204 APYEAQHHVVLADLYAILNKDS 225


>gi|222034254|emb|CAP76995.1| Uncharacterized protein yphG [Escherichia coli LF82]
 gi|312947120|gb|ADR27947.1| hypothetical protein NRG857_12655 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 1093

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|156744315|ref|YP_001434444.1| hypothetical protein Rcas_4410 [Roseiflexus castenholzii DSM 13941]
 gi|156235643|gb|ABU60426.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 360

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 7/193 (3%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
              +R        L   +  +       A K  S   +     +       + QI L + 
Sbjct: 161 SHDERRLQMTEDRLREQMTRMFEGESASADKRASAERESRMLCD-------QGQILLRQG 213

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +   A E+ E  L    T + A          +G  + A     +AL + P++  V    
Sbjct: 214 RPQEAFERFEAALAASDTNQSAWLWRAMALTDLGRFDDALASYDRALALEPESAGVWNNK 273

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               +       A+    +    A   +  +A+  + R       G    +    + S +
Sbjct: 274 GALLMELGRLEAALECFERAIDLAAPISTVKAVYWLNRGKVLYMLGRYAEARDALMHSHE 333

Query: 255 LCDNSIMASICAA 267
           L  +   A+  AA
Sbjct: 334 LEPSPESAAGIAA 346


>gi|221069007|ref|ZP_03545112.1| tetratricopeptide TPR_4 [Comamonas testosteroni KF-1]
 gi|220714030|gb|EED69398.1| tetratricopeptide TPR_4 [Comamonas testosteroni KF-1]
          Length = 916

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 73/219 (33%), Gaps = 21/219 (9%)

Query: 84  GYKALYTGLMSIAAHNIPLA---RKMHSYVSQQHTFHNEYLVYLL---------EVQIAL 131
           GY        +    +   A    +     +     +   LVYLL         E + A 
Sbjct: 182 GYAKASQAYAATERRDFAAALPLARQAVAAAPARLDYQRLLVYLLVENGRFDEAEARAAR 241

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPW 189
            +    +  +    ML+    +  A+       ++   GD+  A R+A  ++ ++P A  
Sbjct: 242 LDNVKQLQSDADWQMLRTSIRQRQALRPFEQALQAREQGDMAKALRHAESSVRLAPQALA 301

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                +   +   + ++A     Q    ++       + + L  +    A +     ++ 
Sbjct: 302 PRLQWLGLLLQDGQAAQAQRVAEQGLALQHDPALQVLQGVALHVQGRGMASE----QAFD 357

Query: 248 DAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEK 285
            A+ +  L         + A  + ++  +  +A+ +L+ 
Sbjct: 358 AALAAPHLSRSERQNYGVIALDAALAAGQTERAQRLLQA 396



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 82/244 (33%), Gaps = 35/244 (14%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNA 218
           +    D  +A   A +A+  +P        +V   V    +  A     +     + ++ 
Sbjct: 192 ATERRDFAAALPLARQAVAAAPARLDYQRLLVYLLVENGRFDEAEARAARLDNVKQLQSD 251

Query: 219 KEW-------NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +W        + +A+    ++L+  ++GDM  +   A  S++L   ++   +     L+
Sbjct: 252 ADWQMLRTSIRQRQALRPFEQALQAREQGDMAKALRHAESSVRLAPQALAPRLQWLGLLL 311

Query: 272 SQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVE 326
              +  +A+ + E+   +   P +       ++       +      AL    +++   +
Sbjct: 312 QDGQAAQAQRVAEQGLALQHDPALQVLQGVALHVQGRGMASEQAFDAALAAPHLSRSERQ 371

Query: 327 SLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +  +++   AL  G                  +    LL  +E  ++ +          A
Sbjct: 372 NYGVIALDAALAAGQ----------------TERAQRLLQALETGSNADVGSRREQL-KA 414

Query: 386 LHAM 389
           L + 
Sbjct: 415 LRSS 418


>gi|91775742|ref|YP_545498.1| TPR repeat-containing protein [Methylobacillus flagellatus KT]
 gi|91709729|gb|ABE49657.1| TPR repeat [Methylobacillus flagellatus KT]
          Length = 700

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 5/143 (3%)

Query: 96  AAHNIPLARKMHSYVSQQHTFH---NEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIP 150
           AA ++  AR  +    Q+          L  +L+     A     +  A +    ++ + 
Sbjct: 120 AAGDLAAARTAYLEARQRAPQDTDIQAGLCSVLQALGNRAQQAGHFAEAEQHFRDLIALQ 179

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                  Y+L       G    A     +AL ISPD       +       ++   AI  
Sbjct: 180 PGNGAWHYNLGNALREQGQAAQAAECYRRALAISPDDADAHNNLGNVLRELQQLPEAIAC 239

Query: 211 LNQKKKNAKEWNRNRAILLIARS 233
             +           R  L+  R 
Sbjct: 240 YERALAINPALYHARVHLVHQRQ 262



 Score = 40.3 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 51/136 (37%), Gaps = 5/136 (3%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKN 217
            L   +C  G L++A  +  + L ++P    + + +      A + + A T  L  +++ 
Sbjct: 81  GLALRAC--GQLDAAIHHFRQGLALAPGDSDLWQNLGAAQHAAGDLAAARTAYLEARQRA 138

Query: 218 AKEWNRNRAILLIARSLEN--ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            ++ +    +  + ++L N     G    +     + + L   +         +L  Q +
Sbjct: 139 PQDTDIQAGLCSVLQALGNRAQQAGHFAEAEQHFRDLIALQPGNGAWHYNLGNALREQGQ 198

Query: 276 KRKAEVILEKIWKVNP 291
             +A     +   ++P
Sbjct: 199 AAQAAECYRRALAISP 214


>gi|74588419|sp|Q5K654|CLF1_PARBR RecName: Full=Pre-mRNA-splicing factor CLF1
 gi|33316748|gb|AAQ04633.1|AF443189_1 cell cycle regulator protein Clf1 [Paracoccidioides brasiliensis]
          Length = 677

 Score = 41.5 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%)

Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185
             A    +  + ++P  +  A++  Y    +  GD              +Y  + +  +P
Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKENP 318

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239
               +    V+    + +  R      +              R    L I  +L E  + 
Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378

Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            DM  ++    E ++L            +  A+  I Q   + A   L       P  ++
Sbjct: 379 KDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438

Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              Y  L     E    + K   +  E +  + ++ +  +++   +  ID+A A   L +
Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497


>gi|323499915|ref|ZP_08104874.1| TPR repeat-containing protein [Vibrio sinaloensis DSM 21326]
 gi|323315156|gb|EGA68208.1| TPR repeat-containing protein [Vibrio sinaloensis DSM 21326]
          Length = 336

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 93/281 (33%), Gaps = 29/281 (10%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQH--TFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           +A+  G  ++   N+ LA   +          F +  L  +   +I  +     +A    
Sbjct: 51  EAITRGDAALKQGNVDLALYEYIRSLSFENGQFRDRSLYNI--GRIHQSRGNLALAERAF 108

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            + ++       A+  L   S R GD+   + Y  KA++         +          +
Sbjct: 109 TLAVETNPNNIQALEQLGIISSRDGDVKQGESYFLKAIN-------ADQLRFGSKRTLTD 161

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIM 261
               ++ ++  K    + +           L      D       A    +L++  +S+ 
Sbjct: 162 QD--LSTVDAVKVLKTDVSSPD---YAYMGLGVLADLDAKHELAQAYYQHALRIKPDSVK 216

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALR 316
               +  S       R+A+ +  +  + +P+ E     +A IY         G++ RAL 
Sbjct: 217 TLTNSGYSYYMSGDYRQAQRLSLQALEEDPNNEKALNNLALIYLG------KGEINRALN 270

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +   +    E+L  V    +  G  DQA      A+   P 
Sbjct: 271 VFTRHMNKPEALNNVGYFLMLQGKPDQAIPYLQQAIDTKPT 311


>gi|260429340|ref|ZP_05783317.1| putative tetratricopeptide TPR_2 [Citreicella sp. SE45]
 gi|260419963|gb|EEX13216.1| putative tetratricopeptide TPR_2 [Citreicella sp. SE45]
          Length = 830

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 81/301 (26%), Gaps = 43/301 (14%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--- 151
               +  LA       + +          LL  Q+         A E L  +L       
Sbjct: 336 AGQQDAALAEAQEVAQAARDRGEAPAGALLLTAQMRDKAGDRAGAEETLRALLADTPLHL 395

Query: 152 -------TREF-------AVYSLY-----------------FESCRIGDLNSAQRYATKA 180
                  T          A+  L                        GD   A++  ++A
Sbjct: 396 EANQLLATYLLDRGQPEPALRHLVAAQSVNSQQPQTLSLLSRAYAASGDAVMARQLQSEA 455

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            D S  AP            A   S AI  LN       E      +  +        + 
Sbjct: 456 FDASGRAPDAALRYALLLADAGSESAAIDVLNASLSRFPE--DLGLLTTLGEQYRLTAQW 513

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
           +  AS  D +  +   +  ++A        ++Q     A   L++ W      + A  Y 
Sbjct: 514 ERAASIEDRLRQIGSGEALLVAERIRFDRQVAQEDIEVAIGYLDQRWSEG--RDSAASYA 571

Query: 301 HLL----SENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
            +     S     + +R L L      E        + +A+     D+A A     ++ A
Sbjct: 572 AITRANLSSGHPERARRVLELGLSRFPEDRNLRAAGATLAMTEQKFDEAAAILQELLQDA 631

Query: 356 P 356
           P
Sbjct: 632 P 632


>gi|255076918|ref|XP_002502122.1| predicted protein [Micromonas sp. RCC299]
 gi|226517387|gb|ACO63380.1| predicted protein [Micromonas sp. RCC299]
          Length = 1318

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 10/207 (4%)

Query: 94  SIAAH-NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++A   +   AR M     +           LL         +   A    + +L     
Sbjct: 117 ALAGGPDSWRARGMAERALRMARGDGFDAKTLLGT-TENDRARTRKAKRWFDEVLDTEEG 175

Query: 153 R--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                A+        R+G +  A     +   I P          +  + A +W  A+  
Sbjct: 176 EGHLEALMGRVKVMERLGQVAGALDALNRVAVIHPSFVPAVAEKAKMRMRAGDWDAALET 235

Query: 211 LNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESL--KLCDNSIMASIC 265
                +      +  R RA  L+      A    MI    DA+ESL  +     +  S  
Sbjct: 236 AQGILERDPKNIDALRLRAFYLLGVEGNAAAGRAMIGQLTDALESLEGRNARLFVSCSRD 295

Query: 266 AAKSLISQNKKRKA-EVILEKIWKVNP 291
            A+     +    A   +LE+   + P
Sbjct: 296 LARVAGGTSTTLSALGRMLERARAIEP 322


>gi|94267436|ref|ZP_01290875.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93452004|gb|EAT02706.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 560

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            L E + A     +  A    +  + + P +RE A+  L   +    D  +A     + L
Sbjct: 368 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAAM-GLATVAQSRNDPLTALHLYQQIL 426

Query: 182 DISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +  P      + +V        A         LN+        +   A L +     +A 
Sbjct: 427 ERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNR--------HPQAAPLHLTMGNLHAS 478

Query: 239 KGDMIASYHDAIESL 253
           +G+   +      +L
Sbjct: 479 QGEWTRARRAYQNAL 493


>gi|114321550|ref|YP_743233.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227944|gb|ABI57743.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 245

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 6/134 (4%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATKALDISP 185
            AL E     A E+ E +++  AT   A  +   L +   R G+L++A+  A++  +  P
Sbjct: 42  AALDEDDRAAARERFEALIERHATSRHAGQARAELAWLHYRAGELDAAREQASRMAETHP 101

Query: 186 DAPWVTEAV-VQQYVLAKEWSR--AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           D P +  A+ V      ++W    A    +Q+       +    + L A         + 
Sbjct: 102 DHPSLPYALYVAAMAAEQQWEDSLARGEPDQRLARRAFADYRAVVDLDAEDRHAGLALEA 161

Query: 243 IASYHDAIESLKLC 256
           +++  +AI   +L 
Sbjct: 162 MSALREAIARHELD 175


>gi|298714766|emb|CBJ25665.1| Methyltransferase [Ectocarpus siliculosus]
          Length = 738

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 67/210 (31%), Gaps = 21/210 (10%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  ++         A +     L++  TR      L       G    A     +A++++
Sbjct: 297 LMARLLHDAGNLQGAVDAYLKALELDPTRSEVFRGLGGAYQSQGQHQMAFASYQQAINLA 356

Query: 185 PDAPWVTEAVVQQ-----------YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           P   W   A ++            Y  A +   AI       +++         +L    
Sbjct: 357 P---WDLLAYLKLGMLYEDLAVGKYEEAGD--HAIRCFQYYLQHSG---SEDTDVLTRLG 408

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                + D  ++      +L +  +        A + +   ++ +A   L++  +++P P
Sbjct: 409 NLQVMRLDPGSAVETYRRALAVDKSLSNVWFNLANAYLKLGEEEEAATCLKEKLRLDPDP 468

Query: 294 E--IANIYTHLLSENTVGKLKRALRLEEIN 321
              ++  Y     E   G+L  + +L    
Sbjct: 469 NAGVSARYLLASLEADPGRLTESDQLAYAR 498


>gi|84626026|ref|YP_453398.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369966|dbj|BAE71124.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 900

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 7/118 (5%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R RA L   R L+   +     +     E+LKL  +  +A+         Q +  ++  
Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRADFALAANNLGFVYFRQGRSAESAR 841

Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            LE   K++P   +A     + Y      +     K      E+  +   +    +++
Sbjct: 842 RLETTLKIDPSRAVAYLNLGDAYAE--GGDREKARKAYSTYLELQPQVSGAAQARAQL 897


>gi|116621859|ref|YP_824015.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225021|gb|ABJ83730.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 246

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 5/133 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISP 185
                +    + A       +++      A+ +L +  +      + A + A  A+ + P
Sbjct: 103 ALALDSRGNRSDAQRAYRATIELDPNNAIAMNNLAFLLAEEGTSFDEALQLARHAMALMP 162

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D+  +T+      +   +   AI   +         +  R  LL    +    KG+    
Sbjct: 163 DSMQMTDTAGWVQLKRGDNDAAIALFSDAVAKEPAEDSFRDHLL----MALERKGERAGI 218

Query: 246 YHDAIESLKLCDN 258
           + + I +LK   +
Sbjct: 219 FGETISALKQAPS 231


>gi|332830243|gb|EGK02871.1| hypothetical protein HMPREF9455_01121 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 551

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 12/195 (6%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA 156
             + LA++    V +Q    +         +IA  E +   A    E  +   P +    
Sbjct: 33  GELKLAKEYFQKVLRQ----SPAEANYYLGEIAFQEGKTAEAKSYYEQAIAGNPES-ALG 87

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L     +  D   A+    +    +     V  A+ Q Y+      +A+     K +
Sbjct: 88  AIGLAKLQLKS-DPKGAEDQLKEIQKKNKKDVTVILAIAQAYLDNGMKEKALE----KLQ 142

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +A++ ++    + I      A +     +     +++    N ++A +  A+     N+ 
Sbjct: 143 DARKADKKSPYIYIFEGDMLAKENKPGDAAMQYDQAINFDANCVLAYMKGARVYEFINR- 201

Query: 277 RKAEVILEKIWKVNP 291
           + A  +L+K+ ++NP
Sbjct: 202 KTATDMLKKVIEINP 216


>gi|320186348|gb|EFW61082.1| hypothetical protein SGF_01429 [Shigella flexneri CDC 796-83]
          Length = 1068

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 607


>gi|331658691|ref|ZP_08359635.1| conserved hypothetical protein [Escherichia coli TA206]
 gi|331054356|gb|EGI26383.1| conserved hypothetical protein [Escherichia coli TA206]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|302508623|ref|XP_003016272.1| hypothetical protein ARB_05671 [Arthroderma benhamiae CBS 112371]
 gi|291179841|gb|EFE35627.1| hypothetical protein ARB_05671 [Arthroderma benhamiae CBS 112371]
          Length = 884

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 55/156 (35%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199
           Q P          Y +    GD + A ++  +AL + PD+  + + +             
Sbjct: 475 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 530

Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                A+++  AI    +  +         + LL  R+  + +  +   +  D   +L+ 
Sbjct: 531 NAAFKARKYREAIDLYTKGLEVDPNNKDINSKLLQNRAQAHININEYDKAIKDCTSALEF 590

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             + I A    AK+        +A   L+ I + +P
Sbjct: 591 DPSYIKARRVRAKANGGAGNWDEALKELKDIAESSP 626


>gi|283853837|ref|ZP_06371056.1| hypothetical protein DFW101DRAFT_3626 [Desulfovibrio sp. FW1012B]
 gi|283570772|gb|EFC18813.1| hypothetical protein DFW101DRAFT_3626 [Desulfovibrio sp. FW1012B]
          Length = 274

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 12/141 (8%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFES----CRIGDLNSAQRYATKALDISPD 186
           LA+     A       ++           L+          G    +  Y  +A++ SPD
Sbjct: 127 LADGNLLEAQRNFRAAVED----YVDEKGLFPLIASRLLDAGQFKPSFEYIRRAVEESPD 182

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                + ++     A+EWS A   L   +         + +L    +L  A  G    + 
Sbjct: 183 NARAYDFLLTAAGKAEEWSLAERILLDVQAKG----VRQPLLDQTLALVEARLGHWAEAR 238

Query: 247 HDAIESLKLCDNSIMASICAA 267
             A  ++        A+   A
Sbjct: 239 SAAKRAVDAAPRLAEAARVLA 259


>gi|188493285|ref|ZP_03000555.1| tetratricopeptide repeat protein [Escherichia coli 53638]
 gi|188488484|gb|EDU63587.1| tetratricopeptide repeat protein [Escherichia coli 53638]
          Length = 1124

 Score = 41.1 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|322436160|ref|YP_004218372.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
 gi|321163887|gb|ADW69592.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
          Length = 810

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 73/251 (29%), Gaps = 35/251 (13%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ---------RYATKALDISPDAPWV 190
              L MM + P TR   V  L  E C+  D  +           +Y       + +   V
Sbjct: 240 RNTLRMMSRNPETRLTPV--LAREICQRTDSAAMLDGSIASLGSQYVITLHATNCNTGEV 297

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKK-----------------NAKEWNRNRAILLIARS 233
                 Q    ++   A++ +    +                 +    +   A+   + S
Sbjct: 298 LYTEQVQAARKEDVLHALSTVASNLRSRLGESISSIRSLDTPLDEATTSSLDALKAFSES 357

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
               ++    A+   A  +++L      A     +      +++ +     K ++   H 
Sbjct: 358 ARVENESGSAAAIQLAQRAVELDPKFAAAWAILGRLYGDIGQEKSSAESTAKAYEFRDHA 417

Query: 294 E------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM-GSIDQAHA 346
                  I   Y   ++ N     +      ++      S    + + L + G  D+A  
Sbjct: 418 SDHERFFIVASYEMQVTGNLEKAEQTCETWAQVYPNDAGSYGFRAGLILRVFGQYDKAIE 477

Query: 347 KAMLAMKIAPR 357
            A   + I P 
Sbjct: 478 NAEHLVGIHPD 488


>gi|299532473|ref|ZP_07045864.1| tetratricopeptide repeat protein [Comamonas testosteroni S44]
 gi|298719558|gb|EFI60524.1| tetratricopeptide repeat protein [Comamonas testosteroni S44]
          Length = 385

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 82/216 (37%), Gaps = 5/216 (2%)

Query: 177 ATKAL---DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232
           A +AL   + +        A++  Y  +++W++A   + + +   + +++   A  L   
Sbjct: 128 AEEALNRLEGTQYEGEARLALLAIYERSRDWAQAAAIVRKMQAAGQGDFSTRLAHYLCED 187

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +      G +  ++    ++L+    +    +  A+    Q +  +A   L+ + + +P 
Sbjct: 188 AQSQVAHGQLDKAFAQLQQALETAPQAPRPRLELAQLQHRQGRSAQALSSLQALAQNSPA 247

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-VIVSKIALEMGSIDQAHAKAMLA 351
                    +      G L  A  L   + E   SL ++ + +A++  S D A       
Sbjct: 248 ALPLAASLLVEVAEATGALAEARDLLLKHYEQAPSLDLLQALVAVDQKSGDAAAPGRQRL 307

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           ++    +   +  AQ  +  +   ++     Q AL+
Sbjct: 308 VQHLEHESSLVAAAQWLEGETLTEEQYHATVQKALN 343


>gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 650

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 16/164 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATR----------EFAVYSLYFESCRIGDLNSAQRYATKALD 182
           E ++ +A + LE M     T                  + E+ R+ D   A     + + 
Sbjct: 211 EGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEALALGGEGV- 269

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             P +  +    +     A  W + +  L + K N       +    +  +       + 
Sbjct: 270 --PMSTTMYNFGIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKDANLED 327

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEK 285
             +Y   + ++ L       +  +A S I    + ++A  +L++
Sbjct: 328 ALAYLTEMRAVGLAPTFF--AYISAMSAIKVAGQWKEALSLLDE 369


>gi|292614103|ref|XP_002662144.1| PREDICTED: tetratricopeptide repeat protein 37-like [Danio rerio]
          Length = 1566

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 69/195 (35%), Gaps = 17/195 (8%)

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           R    Y  Y E     D   A+    +A ++ P       A V   +   +   A+T L 
Sbjct: 491 RLLGHY--YREV--AKDQGRARGCYKRAFELDPSDAEAGAAAVDLSMEQGDMDSALTVLQ 546

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              + A   +   A +   R L +   G    +  D   +L+      +   C  ++ ++
Sbjct: 547 SVTERATPGSAKWAWM--RRGLYHLKIGQHQQAIADLQAALRADPQDWVCWECLGEAYLN 604

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKESV----- 325
           +     A    +K   + P   I ++Y     +  +G+ K A    +  + KE       
Sbjct: 605 RRSFTAALKAFDKAHVLQPT-SIYSLYQTAAIKQILGRFKEAAAEYKQILEKEDYVPALK 663

Query: 326 ---ESLVIVSKIALE 337
              E L+ ++K AL+
Sbjct: 664 GLGECLLALAKSALD 678



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 20/185 (10%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN----KKRKAEVILE 284
           L  ++L +  K     +    +E+L    +S            +      + R    +L+
Sbjct: 419 LTLKALLHVAKEQHKQAEESFLEALSRSPDSGELFFLLGSLYWNMGEEIRRDRSKTHLLK 478

Query: 285 KIWKVNPH-----PEIANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVSKIALE 337
              K++P+       + + Y  +  +    +   KRA  L   +    E+      +++E
Sbjct: 479 AA-KLDPYLGSVFRLLGHYYREVAKDQGRARGCYKRAFEL---DPSDAEAGAAAVDLSME 534

Query: 338 MGSIDQAHAKAMLAMKIA-PRKEIFLLLAQ-IEQANSHNTDKILYWTQSALHAMPDPL-W 394
            G +D A        + A P    +  + + +         + +   Q+AL A  DP  W
Sbjct: 535 QGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHLKIGQHQQAIADLQAALRA--DPQDW 592

Query: 395 ISDDG 399
           +  + 
Sbjct: 593 VCWEC 597


>gi|225163601|ref|ZP_03725909.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2]
 gi|224801803|gb|EEG20091.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2]
          Length = 652

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q ++ A    RA +   Q  ++A       A +     L          +    + +L+L
Sbjct: 17  QAHLQAGRLVRADSLCRQLLQHAP----RDAAVYYLAGLLALRLQRPAEAITRLMTALRL 72

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLK 312
             +S  A+   A  LI   +  +AE++L K  ++ P       A  +   L         
Sbjct: 73  SPDSAPAATLLATVLIDAGRAAEAEIMLAKTARLAPRSAGIVSALAHVQKLQGRVKEAAS 132

Query: 313 RALRLEEINKESV 325
              R  ++  +S 
Sbjct: 133 AYERATQLAPDSP 145


>gi|254284407|ref|ZP_04959375.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           NOR51-B]
 gi|219680610|gb|EED36959.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           NOR51-B]
          Length = 567

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 90/269 (33%), Gaps = 19/269 (7%)

Query: 124 LLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKA 180
           LL  + AL  R +      L  + M+        A  +L   E  ++ D  +A   A + 
Sbjct: 47  LLAAEFALRNRDFQTGLRLLLEQAMILDDP--ALARRALQLAEFMQVND--AALIAAMRL 102

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            D+ PD        ++  +   + +RAI      +K      R  A  L    L++  + 
Sbjct: 103 ADLDPDDSAAAATAMRLLIAVGQPARAI---EYARKAKAGGRRINAPAL----LQDFSQR 155

Query: 241 DMIASYHDAIESLKLC---DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
                   A    +L       +  ++  A     Q     A   L+ +    P  E A 
Sbjct: 156 PAAERRIIATGINELAMQYPEDVDLTLAQALLKREQGDTAAAIEQLDALLSREPDDERAL 215

Query: 298 I-YTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + +T L  +    K   R       N ++    +  +++      +D+A  +  + +  +
Sbjct: 216 VVWTQLALDTDRDKPFGRIDDAVNENPDNERLRLQYARLLASNDQLDRALEQFDVLIASS 275

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQS 384
           PR   +LL A + +    + +        
Sbjct: 276 PRNGDYLLSAALVELEREDYEAGRQRLDQ 304


>gi|325522202|gb|EGD00845.1| TPR repeat-containing protein [Burkholderia sp. TJI49]
          Length = 383

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 59/160 (36%), Gaps = 16/160 (10%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE- 294
                D   +     ++L++  + + A++     L       +A  I+     V  +P+ 
Sbjct: 1   QLAVDDKEGAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIVSFEKYVQQNPKS 56

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               +A    +L  +      K+   + +++ +    L+ ++ I ++   +D A A    
Sbjct: 57  RDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDDASAYLKQ 116

Query: 351 AMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
            +++  ++      + ++ LA+I      N  +   W   
Sbjct: 117 YVQLGAKQPDLDVGQGYIYLAEI-AIEQGNDAQASQWLDK 155


>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 1280

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 4/112 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A    T+AL+I+PD      A         +   AI    Q      ++    A 
Sbjct: 594 GDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDDYTQALNLNPDY----AC 649

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +   R +  +D  D   +  D  E++ +  +   A    A         ++A
Sbjct: 650 IYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLGNYQRA 701


>gi|255264733|ref|ZP_05344075.1| TPR domain protein [Thalassiobium sp. R2A62]
 gi|255107068|gb|EET49742.1| TPR domain protein [Thalassiobium sp. R2A62]
          Length = 562

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 16/257 (6%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
            +H   +     LL  ++     Q+++A +  + + +       A         R G  +
Sbjct: 279 AEHLRSDHIEALLLSARLLEELGQFDLATQAYDSVPRSDPAYHAAELGRSAALRRAGRSD 338

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A    T+  +   D P V +A+        ++  A    +       +       L   
Sbjct: 339 AAIEVLTQLAETHGDLPQVHQALADGLRRDGDYDAANASYSTALSLFTKTMPFHWRLYFH 398

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVN 290
           R++     G+   +  D  +SL L  +     +      +  Q K  +A  ++E+     
Sbjct: 399 RAVTFERLGNWSEAEADLRQSLALNPSQPEVLNYLGYSLVERQEKIDEALTLIERAAAER 458

Query: 291 PHPEI------ANIYTHLLSENTVGKLKRALRLEEINK---ESVESLVIVSKIALEMGSI 341
           P            +Y     E  V  L+RA  LE ++    +       +      +G  
Sbjct: 459 PDTGFIIDSLGWVLYRRGEFEQAVTHLERASELEPVDPVVNDH------LGDAYWAVGRE 512

Query: 342 DQAHAKAMLAMKIAPRK 358
            +A  +   A+   P +
Sbjct: 513 TEARFQWSRALSFDPTE 529



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 80/263 (30%), Gaps = 61/263 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL+    + + Q   A +  + +   P  R F +Y                    KAL +
Sbjct: 129 LLQAWSHVGQGQMARALDDFDDVTASPGLRAFGLYH-------------------KALAL 169

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +                  ++  A     + +   +     RA L   + L   D+ D  
Sbjct: 170 A---------------SVGDFEDADAVFVEAQSGQRT---RRATLAHTQVLSQLDRNDDA 211

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---- 299
                A+       +    +           ++ +A   L   +  +P   IA ++    
Sbjct: 212 LRLMTAVFGNSFGADIAPIA-----------EELRAGAPLGFSFVTSPTDGIAEVFFSVA 260

Query: 300 ----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                 +  + T+   + A  L     + +E+L++ +++  E+G  D A        +  
Sbjct: 261 GALDGEMEPDFTLIYTRIAEHL---RSDHIEALLLSARLLEELGQFDLATQAYDSVPRSD 317

Query: 356 PRKEIFLL--LAQIEQANSHNTD 376
           P      L   A + +A   +  
Sbjct: 318 PAYHAAELGRSAALRRAGRSDAA 340


>gi|168462824|ref|ZP_02696755.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195634056|gb|EDX52408.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 389

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 17/164 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
            + + A    + +++        R  AV  L        D  +A  Y  A    +   D 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136

Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242
                   + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM
Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +     +      NS   SI   +  +++    KA   L+++
Sbjct: 197 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240


>gi|332344424|gb|AEE57758.1| tetratricopeptide repeat protein [Escherichia coli UMNK88]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|313199915|ref|YP_004038573.1| hypothetical protein MPQ_0148 [Methylovorus sp. MP688]
 gi|312439231|gb|ADQ83337.1| TPR repeat-containing protein [Methylovorus sp. MP688]
          Length = 640

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 80/264 (30%), Gaps = 37/264 (14%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y  A   LE +LQ+  T   + +        +G   SAQ Y  +AL   PD       
Sbjct: 103 GRYEEALTALESVLQLRETDAASAFLAGNACMMLGHAESAQAYYQRALQYRPDYAEAYHN 162

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEW------------------------------NR 223
           +       ++W  A++F N+      ++                                
Sbjct: 163 LGIILNQRRQWQDALSFFNKAIDLKPDYLEAYTSCGNALIELGKHDFAIAHFDHVLQVQA 222

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              + L  R +          +      +L        A++  A +L++ ++  +A    
Sbjct: 223 QNPLALNGRGVALKHLRQHALALASFDAALAARPGFAEATLNRANALLALDRHEEALEAY 282

Query: 284 EKIWKVNPH-PEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
                + PH P++     N Y  L   +    L+   +  ++  ++   L   + I L  
Sbjct: 283 GAALALTPHNPQVYSNRGNAYLDLGQYDAA--LQDYDQALQLEPDNATVLWNKALICLVH 340

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL 362
           G  +Q         +       + 
Sbjct: 341 GDFEQGWHLFEHGWEAEGPPRGYR 364


>gi|260856643|ref|YP_003230534.1| hypothetical protein ECO26_3596 [Escherichia coli O26:H11 str.
           11368]
 gi|257755292|dbj|BAI26794.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|254453074|ref|ZP_05066511.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238]
 gi|198267480|gb|EDY91750.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238]
          Length = 572

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 83/314 (26%), Gaps = 68/314 (21%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  + A     Y+ A       L   A     +         +G + SA   A   +   
Sbjct: 34  LAARQAAISGDYDAAALYFRDALLADANNTALMEQTLAAYLGVGQVESAAGIARPFISAG 93

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL------IARSLENAD 238
            ++     A++ Q   A++W      +    +     +                ++   D
Sbjct: 94  GESQIANIALMAQAARAEDWDAIFDLIEAGHEVGPLLDGLAQAWAYLGKGDTVHAMMRFD 153

Query: 239 K----------GDMIASYHDA----IESLKLCDNSIM---------ASICAAKSLISQNK 275
           +          G    +   A    ++      +            + +   + L+    
Sbjct: 154 EVIDTPGLRGFGQQHKALALAMSGDLDGASAIYDLPPNIGIIPTRGSVVAHLQILVQLGD 213

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR------------------- 316
             +A  ++E+ +  +P PE+A + + + +       +                       
Sbjct: 214 FERAGDMIERAFGEDPDPELAALRSAITAGEVPDLSRAVATPSDGISYAFKGFSDILQGE 273

Query: 317 -------LEE-----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-------- 356
                  L       I     ++ +  +++   +G  D A           P        
Sbjct: 274 ANESYLLLYAQAARYIAPHDADTQIATARLLNALGQYDAAAQTFAQVATDDPAFHSAEIG 333

Query: 357 RKEIFLLLAQIEQA 370
           R E   L  +IEQA
Sbjct: 334 RAEALRLAGRIEQA 347


>gi|119493430|ref|XP_001263905.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
 gi|119412065|gb|EAW22008.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
          Length = 522

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 7/180 (3%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173
            +  L  L+   +  LA      A    +  +    +    +           +G    A
Sbjct: 28  PDTPLSSLVASAKAHLASGSARDALLYFDAAVSRDPSNYLTIFQRG--AAYLSLGRTAQA 85

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIA 231
                + L + PD         +      +W  A+    +  K   E  R    A     
Sbjct: 86  LDDFDRVLQLKPDFESALLQRARLRAKTADWDGALHDFERAGKKLSEEYRETQEARDAAF 145

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ +   +G        A  ++     S+      A     + +  +    L  + +++P
Sbjct: 146 QAFDAEKQGAWDDCVGRANTAILKASTSLGLRQTRAHCRFEKGEVEEGISDLVHVLQLSP 205


>gi|104783051|ref|YP_609549.1| M48 family peptidase [Pseudomonas entomophila L48]
 gi|95112038|emb|CAK16765.1| putative peptidase M48 family [Pseudomonas entomophila L48]
          Length = 478

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 58/202 (28%), Gaps = 5/202 (2%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +        D  +      +            E ++   V     +       Q +K+ 
Sbjct: 200 GILNLEKAGYDPRNMPNMFERLARQYRYDAKPPEFLLTHPVTESRIADTRNRAEQARKDG 259

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E      ++    +L    +G    +       L        A    A + I   +  +
Sbjct: 260 TEDTLRYQLIRARVALTY--EGTPGLAAKRFRAQLDENPQLDAARYGLALAQIKGGQLNE 317

Query: 279 AEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A   L+ +    P+     +A I   + +       +RA RL+ +   +     + + + 
Sbjct: 318 ARENLKPLLAKAPNDITYNLAQIDLDITNNRLADAQQRAQRLQGLYPGNYPLKQVRADLL 377

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
           ++ G   +A       +K  P 
Sbjct: 378 IKQGKPAEAEKVLDDLVKSRPD 399


>gi|16127358|ref|NP_421922.1| TPR domain-containing protein [Caulobacter crescentus CB15]
 gi|221236164|ref|YP_002518601.1| tetratricopeptide repeat family protein [Caulobacter crescentus
           NA1000]
 gi|13424790|gb|AAK25090.1| TPR domain protein [Caulobacter crescentus CB15]
 gi|220965337|gb|ACL96693.1| tetratricopeptide repeat family protein [Caulobacter crescentus
           NA1000]
          Length = 673

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 73/259 (28%), Gaps = 18/259 (6%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNI--AHEKLEMMLQIPATREFAVYSLYFES 164
            +    +    +     +L               A      M  +P      +  L    
Sbjct: 33  QARAILEVVPRHADTTRVLAA-AQRLSGDAEGGLATVAPLAMA-LPNLPLAQLE-LALCL 89

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+G    A R   +   + P        + +   L  +   A   L ++ + +      
Sbjct: 90  ERLGRTAEAARAFDRVSALEPRLSEAWRGLSESLELLGDRQGAERALARQLRASTRDP-- 147

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
               L+  +     +  +  +     + LK     + A    A++     +   AE +L 
Sbjct: 148 ----LLVEAATALAEDRLGEAERLLRDRLKADAGDVAAIRMLAETGARLGRYADAEALLT 203

Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +  ++   P  A    +L          +  L +  +L   +        + + I   +G
Sbjct: 204 RCMELA--PNFAAARHNLATMLYRQNKNLEALAQIEQLVAKDARHPGYANLYAAILARLG 261

Query: 340 SIDQAHAKAMLAMKIAPRK 358
             D+A A     +   P +
Sbjct: 262 EYDRAIAVYGQVLADYPNQ 280


>gi|103486441|ref|YP_616002.1| tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256]
 gi|98976518|gb|ABF52669.1| Tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256]
          Length = 613

 Score = 41.1 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 80/299 (26%), Gaps = 41/299 (13%)

Query: 87  ALYTGLMSIAAH-NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           AL    +++        A K                   L  +    +     A   LE 
Sbjct: 54  ALARVAIALGDGVGAEAAVKGAIEAGANDAALRP-----LLARAFELQGDGARALAALEA 108

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
              IP     A +         GDL +A+    +A+   P +  +   V +    + +  
Sbjct: 109 GPVIPEMLGEAAWVAGDVHLANGDLAAAREAYDRAVHELPRSSALWVDVARFRDASADMR 168

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A   ++     A E +   +  L  ++        + A+      +L     +  A I 
Sbjct: 169 GARDAVD----YAIELDAANSAALAYKANLVRRAEGLTAALAWYDRALAADPGNAAALID 224

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            A +L    + R                            + +  L+RA  L        
Sbjct: 225 QAATLGDLGRYR----------------------------DMLTALRRAAVLV---PREP 253

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
               + + +A    +   A +           +  F+LL+ + +           W + 
Sbjct: 254 RIHYLQAVLAARAANYRLARSLLQRTRGALDSEPGFMLLSAVVELELGGEAVAASWAER 312



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 6/188 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              AR +   V  +         ++L    ALA  +Y +A E       + A     +  
Sbjct: 426 GNTARAIERAVRLRDANPGVADAHMLLGDAALAGGRYALAVEAYRAARNLDAGERTTLR- 484

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKNA 218
               +       +    A  AL     +    + +     +    W  AI    +     
Sbjct: 485 -LANALYRAGDAAGSGAAIMALRDRQPSSVAADRIAGHLAIELGHWDAAIAHFERVGSRI 543

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +     A++L   +   A KGD   +      + +L   +       A  L  + K++ 
Sbjct: 544 GD---RDAVVLRELARAWAAKGDDARALVLIDRAYRLQPLNAGIMELYAALLERRGKRQA 600

Query: 279 AEVILEKI 286
           A  + +K 
Sbjct: 601 AADLRDKA 608


>gi|332197745|gb|AEE35866.1| superkiller protein 3-like protein [Arabidopsis thaliana]
          Length = 1140

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 30/179 (16%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLEN 236
             A + SP A W    +    +  K+WS A+  L    +      +   A+ L  + L  
Sbjct: 111 RDASEKSPKAFWAFCRLGYIQLHQKKWSEAVQSLQHAIRGYPTMSDLWEALGLAYQRLGM 170

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
                 I +Y  AIE   L +  I A + +A   +     RK   + E+  K++P     
Sbjct: 171 F--TAAIKAYGRAIE---LDETKIFALVESANIFLMLGSYRKGVELFEQALKISP----- 220

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                          +    L  +       L+  SK  + +G+   A +    A K A
Sbjct: 221 ---------------QNISVLYGLAS----GLLSWSKECINLGAFGWAASLLEDARKAA 260


>gi|299136536|ref|ZP_07029719.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298601051|gb|EFI57206.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 696

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 68/184 (36%), Gaps = 27/184 (14%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL---KLCDNSIMASICA----AKSLISQN 274
           +R+ A      +    D+         A +++   KL  ++   S       +       
Sbjct: 43  DRSSAYYHYGLAKIYEDEASGNGRQDLATQAIEQYKLALDADPGSRMLQDGLSNLYFKLG 102

Query: 275 KKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGK--------LKRALRLEE 319
           + R+A    +   +V  HP+       +  +Y   L +    +        +K   ++ E
Sbjct: 103 RIREAVTAAQD--QVAKHPDDADAHMLLGRVYLRSLGDGQSPQSSDMLQMAIKEYEKIAE 160

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQI--EQANSHNTD 376
           +    +E+ +++ ++        +A A+   A +I    +E+ L +A++  EQ +     
Sbjct: 161 LKPNDLETHLLLGQLYGLNHDSAKAEAQFKAAQQIDGSSEEVVLSMARLYSEQGDLQRAA 220

Query: 377 KILY 380
           K++ 
Sbjct: 221 KVIA 224



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 89/275 (32%), Gaps = 27/275 (9%)

Query: 130 ALAERQYNIAHEKLE----MMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDI 183
           A    + ++A + +E     +   P +R     + +LYF   ++G +  A   A   +  
Sbjct: 61  ASGNGRQDLATQAIEQYKLALDADPGSRMLQDGLSNLYF---KLGRIREAVTAAQDQVAK 117

Query: 184 SPDAPWVTEAVVQQYVLA---KEWSRAITFLNQKKKN-----AKEWNRNRAILLIARSLE 235
            PD       + + Y+ +    +  ++   L    K        + N     LL+ +   
Sbjct: 118 HPDDADAHMLLGRVYLRSLGDGQSPQSSDMLQMAIKEYEKIAELKPNDLETHLLLGQLYG 177

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL----EKIWKVNP 291
                    +   A + +      +   +  A+    Q   ++A  ++    E       
Sbjct: 178 LNHDSAKAEAQFKAAQQIDGSSEEV--VLSMARLYSEQGDLQRAAKVIADVSEDDRSARM 235

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +A IY  L        +       + + ++ ++   ++   +  G  D A       
Sbjct: 236 DFALAGIYDQLKQ--PKQAVAAYRATLDQDPDNTDAKRGLANALIANGETDAAAKIFAEI 293

Query: 352 MKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +   P   +  +  A I++   H  ++ L   + A
Sbjct: 294 ISSDPQDAQSLIREADIQRQQGH-YEQALATLKKA 327


>gi|299754015|ref|XP_001833698.2| cell division cycle protein 27/anaphase promoting complex subunit 3
           [Coprinopsis cinerea okayama7#130]
 gi|298410567|gb|EAU88243.2| cell division cycle protein 27/anaphase promoting complex subunit 3
           [Coprinopsis cinerea okayama7#130]
          Length = 639

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 92/286 (32%), Gaps = 29/286 (10%)

Query: 100 IPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAER-------QYNIAHEKLEMMLQIP 150
              AR++  Y  ++     E L   +       +           Y+ A        +I 
Sbjct: 318 ASAARRLALYDCKRCLKELERLPPAHQKSASTLVMIGKVHYELQDYSSAERAFRSAREIE 377

Query: 151 ATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             R     VYS      +     S    A + L+I+P +     A+   + L K+ ++A+
Sbjct: 378 PYRLWDMEVYSTLLWHLQRNIELS--YLAQELLNINPQSSQAWIAIGNLFSLQKDRTQAL 435

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
           T      K A + + + A        E  D+ ++  S      +L++      A      
Sbjct: 436 TCF----KRAAQLDPSCAYAFTLSGHETIDE-NLDVSTTFFESALRVDARHYNAWYGLGT 490

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKESV 325
             +  +K R+AE    K  +++PH  +      +     +     L    +  E   E+ 
Sbjct: 491 CYLRASKIRRAEYHYRKALEIHPHNAVILGCVAMTLERRQEYDQALSYYNKAIEACPENA 550

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLL 363
                 +K+ + M   ++A        +  P           ++ L
Sbjct: 551 LVRYRRAKMWVSMRKYNEALKDLEHLRRTTPEEANVIFQLARVYRL 596


>gi|91211873|ref|YP_541859.1| hypothetical protein UTI89_C2868 [Escherichia coli UTI89]
 gi|237705056|ref|ZP_04535537.1| tetratricopeptide repeat protein [Escherichia sp. 3_2_53FAA]
 gi|91073447|gb|ABE08328.1| hypothetical protein YphG [Escherichia coli UTI89]
 gi|226901422|gb|EEH87681.1| tetratricopeptide repeat protein [Escherichia sp. 3_2_53FAA]
 gi|294493666|gb|ADE92422.1| tetratricopeptide repeat protein [Escherichia coli IHE3034]
          Length = 1124

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|307167322|gb|EFN60967.1| Mitochondrial import receptor subunit TOM70 [Camponotus floridanus]
          Length = 591

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 6/163 (3%)

Query: 94  SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA 151
           +I   ++ LA   M  +      F +    Y+L  Q+    +QY+ A     + + + P 
Sbjct: 422 AIFNRDVRLAEEAMKDFEKAFIKFPDRSECYMLYAQMMAETQQYDKADMYFAKAIEKDPK 481

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                V+    +    G+++ A  Y  KAL+         E++    V       AI   
Sbjct: 482 NATIYVHKGLLQLQWNGNIDKAVEYFRKALETDEKCEHAYESLGSIEVQRGNIREAIRLF 541

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           ++      E  R    L    SL +A +  +       +E ++
Sbjct: 542 DKAL----ELCRTSMELAHLYSLRDAAQTQLNLQNRLGMEGIR 580


>gi|302392828|ref|YP_003828648.1| hypothetical protein Acear_2093 [Acetohalobium arabaticum DSM 5501]
 gi|302204905|gb|ADL13583.1| Tetratricopeptide TPR_2 repeat protein [Acetohalobium arabaticum
           DSM 5501]
          Length = 729

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 8/101 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTH-LLSENTVGKLKRALRLEEIN 321
           A+      +  KA  +L++  ++ P    + ++A  Y         +  +K AL L+   
Sbjct: 267 AQLYYEVLETDKAVEMLKQAVEIKPKIKYYRKLAEFYREQSRYNKAIEAIKEALVLDYKR 326

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
               E    + ++ L++ +IDQA +    A+ +AP  + +L
Sbjct: 327 G---ELHYTLGELHLQLQNIDQARSSLERAVNLAPTNKEYL 364


>gi|322420095|ref|YP_004199318.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320126482|gb|ADW14042.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 665

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 67/240 (27%), Gaps = 16/240 (6%)

Query: 40  SPFVILSILYFFLFAWILLFAVSRFFLSCPAML-----FHMLHKRNYDKGYKALYTGLMS 94
           S   I   +      +  +          P  L          K   +  Y     G+  
Sbjct: 432 SARAITVGIAALALVFGGVTWQRNKVWESPVSLWGDVVSKSPAKSRANDHY-----GVAL 486

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
                   A +      Q +  +   L  L   ++       + A    E ++ +    +
Sbjct: 487 SGVGRTGEAIEFLKTALQINPRNEYALYNL--GRLFDETNNIDAAIGCYEAVIDLKPDLD 544

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A  +L  +    GD + A +Y   AL   P        +        +   AI      
Sbjct: 545 LAYNNLAVDYLLKGDDDRAIQYYNIALKHKPQFAEAHNNLGFALQRKGKVDEAIEHYRAA 604

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +    +   +A   +  +     KG++  +     E+L+L      A    AK+L  + 
Sbjct: 605 IRENPGY--AKAYNNLGEA--YLAKGELDRAIGQFREALRLRPEDEAARENLAKALQQKG 660


>gi|221042950|dbj|BAH13152.1| unnamed protein product [Homo sapiens]
          Length = 630

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 349 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 404

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 405 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 457


>gi|254282484|ref|ZP_04957452.1| hypothetical protein NOR51B_977 [gamma proteobacterium NOR51-B]
 gi|219678687|gb|EED35036.1| hypothetical protein NOR51B_977 [gamma proteobacterium NOR51-B]
          Length = 498

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 91/327 (27%), Gaps = 29/327 (8%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +  L      Y +   +        L   ++   +     A    + +L   A    A+ 
Sbjct: 19  DEDLEAAEARYAALLASDPQSAEAKLGLGRVLQQQGFQRPAMGLFQSVLDDDAKHVGALV 78

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L      +G  ++A     +A+   PD   V   +   Y  +     A+    +    A
Sbjct: 79  GLGLSLKAMGWNDAAADTLVEAVRAQPDDGKVWGHLASAYSASGREDEAVAAYQEALLLA 138

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +     A     R L      D + SY D +    +  +    +   A+ LI+     +
Sbjct: 139 PDDLELHA--WFNRYLGVLGHDDFLKSYRDRLV---IQPDDQACASELARLLIAGGCPDE 193

Query: 279 AEVILEK---IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A  +L +       +P   +  +            L+ A        +  +  +  +   
Sbjct: 194 ALAVLTEHVDAESASPATGVLRVEALRELGQFDSSLEAARTGLRHFPQHRDVKLAFAIAL 253

Query: 336 LEMG-SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH---AMPD 391
           +  G    +A A      K AP                 + + I ++   AL    +   
Sbjct: 254 MASGADYGEAEALLGSMAKAAPD----------------DQEVIAHYLT-ALRYTGSDRY 296

Query: 392 PLWISDDGYLSSVWLPLSPISKTLCYF 418
             W+     +    L  S     L   
Sbjct: 297 RGWVDYARIVHPSTLIASEGCADLDTL 323


>gi|195435350|ref|XP_002065657.1| GK14555 [Drosophila willistoni]
 gi|194161742|gb|EDW76643.1| GK14555 [Drosophila willistoni]
          Length = 598

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 14/135 (10%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--- 227
             A     KA+ ++PD      A+VQ+      +  A+   +QK+  +   +  +AI   
Sbjct: 394 EPALAEFDKAVSLAPDH---AIALVQRCYAE--YRLALLSGDQKRLESVMRSFEQAIEKF 448

Query: 228 -----LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEV 281
                     +   AD+     ++    +++KL   +    +  A  ++  +    KA  
Sbjct: 449 PDCVECYSLMAQVLADQQQFPQAHQYYDKAMKLAPTNPALIVHQAIMMLQWRGDIEKAVQ 508

Query: 282 ILEKIWKVNPHPEIA 296
           +LE   +V+P  E+A
Sbjct: 509 LLEHAIEVDPKCELA 523



 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 6/166 (3%)

Query: 93  MSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP 150
           +++ + +   L   M S+      F +    Y L  Q+   ++Q+  AH+   + M   P
Sbjct: 424 LALLSGDQKRLESVMRSFEQAIEKFPDCVECYSLMAQVLADQQQFPQAHQYYDKAMKLAP 483

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                 V+         GD+  A +    A+++ P      E +    V     +RA+  
Sbjct: 484 TNPALIVHQAIMMLQWRGDIEKAVQLLEHAIEVDPKCELAYETLGTVEVQRAHLTRAVEL 543

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +       +++++A L+   SL NA    +  +    I+   + 
Sbjct: 544 FEKALI----YSKSQAELVHVYSLRNAALAQINVTKKLGIDMNSVS 585


>gi|147769448|emb|CAN74770.1| hypothetical protein VITISV_014241 [Vitis vinifera]
          Length = 306

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 12/140 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G LN A +   +AL I+P        +V  +     + +A   + +      E  R 
Sbjct: 175 MRKGRLNEAAQCCRQALAINP-------LLVDAHSNLGNFMKAQGLIQEAYSCYIEALRI 227

Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +   AI     +    + GD+  +     E++KL      A +       +    ++A V
Sbjct: 228 QPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIV 287

Query: 282 ILEKIWKVNPHPEIANIYTH 301
             ++  +    PE A  Y  
Sbjct: 288 CYQRALQTR--PEYAMAYGE 305


>gi|145345359|ref|XP_001417181.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577408|gb|ABO95474.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1059

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 9/162 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD---------LNSAQRYATKALDIS 184
             +  A      +L++      A+  L      + D         + +A R   +A    
Sbjct: 219 GDFKTAKLAFARVLKLDERNVEAMLGLALCELSLHDIRSQQHLDSVAAAMRLLERAFMHD 278

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    V   +    ++A ++ +         +N  E  RNRA     ++     +G +  
Sbjct: 279 PHNQAVNNVISDNLLMADDYEKVEKLTRLALQNNAETPRNRAKAAFNQARALHARGQVPQ 338

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +    + +  L ++ +       +  +++   + A   ++K 
Sbjct: 339 AQALYLTATNLDEHYVPPYFGLGQIALAKGDVKLAWNYMDKA 380


>gi|254481224|ref|ZP_05094469.1| Sulfotransferase domain family protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038387|gb|EEB79049.1| Sulfotransferase domain family protein [marine gamma
           proteobacterium HTCC2148]
          Length = 665

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 30/269 (11%), Positives = 85/269 (31%), Gaps = 20/269 (7%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           A  +   A +  +         +     + +  +  A+ +Y  A    + +++       
Sbjct: 117 ATGHDDKAEEAFARSRAL----SPQKGQIEQASVLFAQGKYREAETVAKELVRQNPQDVN 172

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A   L   + +    + A+    K + ++P        +        +++ AI  L + +
Sbjct: 173 AAALLARIAIQAHCYDDAEALLRKVVQMAPPFIQAWHDLSTALKEQSKFTEAIEALKKAR 232

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +   +       L  A +++         +      +L++  +   A +     L +  K
Sbjct: 233 EIEPDNAITHYFLGAALAMD----SSPELAEASYQRALQIDSSLSGAHLGLGHVLKTLGK 288

Query: 276 KRKAEVILEKIWKVNP-----HPEIAN----IYTHLLSENTVGKLKRALRLEEINKESVE 326
           + +         K+ P     H  ++N    ++     E+   +L+   +L + +     
Sbjct: 289 QEEGIAAYRAAMKLRPNFGEIHYSLSNLKTFVFDDAEIEDMTRRLES-EQLSKESVVHF- 346

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               + K   +    D+A      A +  
Sbjct: 347 -CFALGKAFEDAKDYDKAFEYYSRANETH 374


>gi|212693847|ref|ZP_03301975.1| hypothetical protein BACDOR_03369 [Bacteroides dorei DSM 17855]
 gi|212663599|gb|EEB24173.1| hypothetical protein BACDOR_03369 [Bacteroides dorei DSM 17855]
          Length = 259

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              LNQK    +++ +++NR           L AR+    +      +  D  E+ KL  
Sbjct: 153 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 212

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295
           +     +   +  +SQ KKR+A V  EK  ++  P PE+
Sbjct: 213 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 251


>gi|190194345|ref|NP_001121730.1| tetratricopeptide repeat protein 21B [Danio rerio]
 gi|169146276|emb|CAQ13801.1| novel protein similar to vertebrate tetratricopeptide repeat domain
           21A (TTC21A) [Danio rerio]
          Length = 1321

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 93/277 (33%), Gaps = 45/277 (16%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEM-MLQIPAT 152
           + +I  A+      S QH           +LL  QI L +  Y ++ + LE+ +      
Sbjct: 510 SGDIDAAQ-----SSLQHCLDQNPAHADAHLLMAQIHLIQGNYKLSSQSLELCLSHNFEI 564

Query: 153 REFAVYSLYF-ESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           RE  +Y L   ++ R  G L  A +                +  +    + +  S A   
Sbjct: 565 REHPLYHLIKAQAQRKMGQLQEAIQ--------------TLQMAMSLCAVKRTGSSAKR- 609

Query: 211 LNQKKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              K+      +     L +A +L  N ++ +      DAI         +  +I  A  
Sbjct: 610 -QSKRVELSSADCVSVFLELAEALWLNGEQHEAAKVMQDAINEFTGTPEELRVTIANADL 668

Query: 270 LISQNKKRKAEVIL-----EKIWKVNPHPEIANIYTHLLSENTVGKLKRA-----LRLEE 319
            + +     A  +L     E+ + +    ++A+IY +   E      KR        L +
Sbjct: 669 ALMRGDTELALSMLRNITPEQPYYIQAKEKMADIYLNHRKE------KRLYVSCYRELVD 722

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  S +++    + +   + A      A+K  P
Sbjct: 723 KMPN-PHSFLLLGDAYMNIQEPELAIEVYEQALKKNP 758


>gi|114681195|ref|XP_001143495.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 564

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 197 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 256

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 257 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 316

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 317 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 375

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 376 RAIYELAI 383


>gi|115403015|ref|XP_001217584.1| hypothetical protein ATEG_08998 [Aspergillus terreus NIH2624]
 gi|114189430|gb|EAU31130.1| hypothetical protein ATEG_08998 [Aspergillus terreus NIH2624]
          Length = 522

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 10/141 (7%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  LA      A    +  +    T    +      + S R      A 
Sbjct: 29  DTPLSSLVASAKSHLASGSARDALLYFDAAIARDPTNYLTIFQRGAAYLSLRRN--TQAL 86

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEW----NRNRAILL 229
               + L++ PD         +    + +W+ A++ L +  KK++ E+        A L 
Sbjct: 87  EDFDRVLELKPDFESALLQRSRLRASSADWTGALSDLAKAGKKSSPEYAELEEARDAALK 146

Query: 230 IARSLENADKGDMIASYHDAI 250
             ++ +     D I   + A+
Sbjct: 147 AQKAEDRKQWDDCITQANVAV 167


>gi|89109355|ref|AP_003135.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|162135907|ref|NP_417044.4| conserved protein [Escherichia coli str. K-12 substr. MG1655]
 gi|170082159|ref|YP_001731479.1| hypothetical protein ECDH10B_2716 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238901714|ref|YP_002927510.1| hypothetical protein BWG_2313 [Escherichia coli BW2952]
 gi|300951739|ref|ZP_07165558.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|300958815|ref|ZP_07170927.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|161789053|sp|P76585|YPHG_ECOLI RecName: Full=Uncharacterized protein yphG
 gi|85675444|dbj|BAE76731.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|87082126|gb|AAC75602.2| conserved protein [Escherichia coli str. K-12 substr. MG1655]
 gi|169889994|gb|ACB03701.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|238860360|gb|ACR62358.1| conserved protein [Escherichia coli BW2952]
 gi|260448371|gb|ACX38793.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli DH1]
 gi|300314563|gb|EFJ64347.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|300449023|gb|EFK12643.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|315137173|dbj|BAJ44332.1| hypothetical protein ECDH1ME8569_2476 [Escherichia coli DH1]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|83643569|ref|YP_432004.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83631612|gb|ABC27579.1| protein containing tetratricopeptide repeats [Hahella chejuensis
           KCTC 2396]
          Length = 311

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 38/200 (19%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D   A R    ALD +P A     A++   ++ +    A      + +     +R  A  
Sbjct: 18  DYEKATRNLKSALDSAPSAE--GHALLALCLIPQNRILAARV---EAQRGVAEDRRSAFC 72

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
             A +  +       A+      +L+L      ++   A      ++ ++   ILE    
Sbjct: 73  HYAAAAASEAGKHYDAARRHIELALELEPQ--TSAYQIASL--RLDRLQQGSDILEP--- 125

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                                       L       +  +  +++   +    +QA+  A
Sbjct: 126 -------------------------LKTLLSERPNDLAVIYALAECYCDSSEWEQAYLYA 160

Query: 349 MLAMKIAPR-KEIFLLLAQI 367
             A+++    +   +L+A++
Sbjct: 161 GRALRLEATSQRALMLMARV 180


>gi|94309670|ref|YP_582880.1| tetratricopeptide repeat protein [Cupriavidus metallidurans CH34]
 gi|93353522|gb|ABF07611.1| putative N-Acetylglucosaminyl transferase; Tetratricopeptide TPR
           repeat protein [Cupriavidus metallidurans CH34]
          Length = 409

 Score = 41.1 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 6/153 (3%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +   P      RE A+Y L  +  R G L+ A+    + L   P A  
Sbjct: 84  GETERAIRVHQNLATRPDLPEPEREHALYELGQDFLRAGLLDRAEESLRR-LMSGPYAAS 142

Query: 190 VTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +++ Y + KEW +AI      +  + +++    A      + +   K     +   
Sbjct: 143 AKRVLLELYEVEKEWQKAIEAARELQALDQQDYRVQIAQFCCELAQDALLKKRPEDAVEW 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              + +    ++ A I       +      A  
Sbjct: 203 LRRATQENPANVRAPILLGDVSAAGGDTEGALK 235


>gi|331648241|ref|ZP_08349331.1| conserved hypothetical protein [Escherichia coli M605]
 gi|330912319|gb|EGH40829.1| uncharacterized protein YphG, TPR-domain containing [Escherichia
           coli AA86]
 gi|331043101|gb|EGI15241.1| conserved hypothetical protein [Escherichia coli M605]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|297566081|ref|YP_003685053.1| hypothetical protein Mesil_1660 [Meiothermus silvanus DSM 9946]
 gi|296850530|gb|ADH63545.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus silvanus DSM
           9946]
          Length = 370

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 89/311 (28%), Gaps = 73/311 (23%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA-----QRYATKA------L 181
             ++  A    E  ++   +   ++Y L     R+G + +A     +  A  A      +
Sbjct: 56  AGRFETAQPFFERAVKECNSSAESLYFLARNQMRLGLMTAAIENLRRSIAQNATFINSYI 115

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++            +        +A+  L    ++A+  N   A +   R++    +G 
Sbjct: 116 ALAQAYTDSFRFAENREAAKGNLDQALNVL----RDAERVNSKYAPIYSWRAVVLGLQGQ 171

Query: 242 MIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKVNP--------- 291
              +   A  ++ L D+   A     A   ++Q K  +A  I        P         
Sbjct: 172 YDRAIEAANRAIALDDD--PALRSTLASLYVAQGKPDEALKIYNDAVNKYPKDSDLRIKY 229

Query: 292 ---------------HPEIANIYTHLLSENTVGKLKRALRLEEINK-------------- 322
                          H   A I     +E  V + +    L+                  
Sbjct: 230 GTFLLARKDCTAALAHLNQAAILAPGNAEVYVYQGQALECLKSWKPAGAAYENAVALSPV 289

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
              E+   + ++ LE+G   +A      A+ + P+   F                  YW 
Sbjct: 290 RYPEAYAGLGRVYLELGDAQKARFNLTKAVALEPQNASF-----------------RYWL 332

Query: 383 QSALHAMPDPL 393
             A   + D  
Sbjct: 333 GKANEVLGDKA 343


>gi|291614814|ref|YP_003524971.1| hypothetical protein Slit_2357 [Sideroxydans lithotrophicus ES-1]
 gi|291584926|gb|ADE12584.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
          Length = 591

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 80/272 (29%), Gaps = 11/272 (4%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L   L   IA    Q  +A +    + +       A  +    +    D ++A       
Sbjct: 70  LYEFLLGDIAAQRNQPKLAAQAYLDLAKTTRDPRVARRA-AQLAYESRDYDTAVESFKLW 128

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            ++ P +P   +  +   +   +   A   L++  +                +       
Sbjct: 129 EELEPASPLAKQLYLSLLLSGGKLQEARPLLDEVLRADPASAGRTFTSTYPMAAHGTQDK 188

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-- 298
             I ++  A+       +        A++  +  K+  A   + +   + P  ++A +  
Sbjct: 189 SAILAWTIAVTHPY--PDVAEGHWAVAQAAAAAGKQDLALAEIHRAVTLRPDWDVAAVFE 246

Query: 299 ---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
              Y +   +  +  LK+     + + E+ E  +  ++  L       A  +    +   
Sbjct: 247 AQLYLNSEPQKGLDLLKKF---LDAHPENRELRLYYARALLNQKQFAAARDEFQRLLDDR 303

Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           P          +        D+     Q AL+
Sbjct: 304 PDSPDLAFAVALISMQMGEYDRAEKELQQALN 335



 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 23/299 (7%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAE---RQYNIAHEKLE-MMLQIPATREFAVYSLY 161
             +    Q    +      L   +AL      +Y+ A ++L+  + +         Y L 
Sbjct: 290 AAARDEFQRLLDDRPDSPDLAFAVALISMQMGEYDRAEKELQQALNKGGRDESTVHYYLA 349

Query: 162 FESCRIGDLNSAQRYAT--KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
             +    D  +A  +    K  +    A     A++     A +   A+  L++      
Sbjct: 350 QLNEARKDDAAALEHYRLVKEGEYGYAARLREVALLD---KAGKLDEALDALHRAVAKND 406

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E      ++      EN           + ++      + +  +  AA      +K    
Sbjct: 407 EQRVQLIMIDAQLLRENKKYETSYQVLAEGLKKFPENPDLLYQTAMAAD---KLDKVELF 463

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGK-------LKRALRLEEINKESVESLVIVS 332
           E ++ K+ K++  P+ A+ Y + L  + + +       +K   +  ++  +       + 
Sbjct: 464 EKLIRKLMKIS--PDNAHAY-NALGYSLLDRKVRIKEAMKLVEKAYQLEPDDAAITDSMG 520

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                MG++D++      A    P  EI   L ++   +         WT SA  A PD
Sbjct: 521 WGYYLMGNLDESLKFLNRAFAANPDPEIAAHLGEVMWMHGDKAGARKIWTDSA-KANPD 578


>gi|55859637|emb|CAI11004.1| transmembrane and tetratricopeptide repeat containing 4 [Homo
           sapiens]
          Length = 684

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 403 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 458

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 459 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 511


>gi|16760172|ref|NP_455789.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765052|ref|NP_460667.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142057|ref|NP_805399.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413366|ref|YP_150441.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161613809|ref|YP_001587774.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549790|ref|ZP_02343548.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168230140|ref|ZP_02655198.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194446469|ref|YP_002040959.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194469605|ref|ZP_03075589.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194737248|ref|YP_002114737.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197247715|ref|YP_002146321.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197265165|ref|ZP_03165239.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198242977|ref|YP_002215435.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390499|ref|ZP_03217110.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204927717|ref|ZP_03218918.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|213052586|ref|ZP_03345464.1| hypothetical protein Salmoneentericaenterica_06516 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213416473|ref|ZP_03349617.1| hypothetical protein Salmonentericaenterica_00137 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213424422|ref|ZP_03357235.1| hypothetical protein SentesTyphi_01405 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582489|ref|ZP_03364315.1| hypothetical protein SentesTyph_15343 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213647983|ref|ZP_03378036.1| hypothetical protein SentesTy_12279 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855514|ref|ZP_03383754.1| hypothetical protein SentesT_16285 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224583802|ref|YP_002637600.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911902|ref|ZP_04655739.1| hypothetical protein SentesTe_12321 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825191|ref|ZP_06544499.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25324989|pir||AD0655 conserved hypothetical protein STY1343 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16420238|gb|AAL20626.1| putative N-acetylglucosaminyl transferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16502466|emb|CAD08423.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137686|gb|AAO69248.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56127623|gb|AAV77129.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161363173|gb|ABX66941.1| hypothetical protein SPAB_01543 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405132|gb|ACF65354.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194455969|gb|EDX44808.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194712750|gb|ACF91971.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197211418|gb|ACH48815.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197243420|gb|EDY26040.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197937493|gb|ACH74826.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602944|gb|EDZ01490.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204323059|gb|EDZ08255.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205324977|gb|EDZ12816.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205335504|gb|EDZ22268.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|224468329|gb|ACN46159.1| hypothetical protein SPC_2023 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|267993649|gb|ACY88534.1| hypothetical protein STM14_2066 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312912699|dbj|BAJ36673.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085795|emb|CBY95571.1| Uncharacterized protein HI1223 Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321224336|gb|EFX49399.1| Heat shock predicted periplasmic protein YciM, precursor
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322614966|gb|EFY11891.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621440|gb|EFY18294.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623218|gb|EFY20060.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628508|gb|EFY25296.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633672|gb|EFY30412.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638520|gb|EFY35215.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640810|gb|EFY37459.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645326|gb|EFY41854.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651791|gb|EFY48163.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654312|gb|EFY50634.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659278|gb|EFY55526.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662721|gb|EFY58928.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667668|gb|EFY63828.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671918|gb|EFY68039.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677036|gb|EFY73100.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680302|gb|EFY76341.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685269|gb|EFY81265.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323129978|gb|ADX17408.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323196181|gb|EFZ81340.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199328|gb|EFZ84422.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204786|gb|EFZ89782.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205918|gb|EFZ90881.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212719|gb|EFZ97534.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217245|gb|EGA01966.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222890|gb|EGA07243.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225572|gb|EGA09800.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232107|gb|EGA16214.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234634|gb|EGA18721.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238086|gb|EGA22145.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243311|gb|EGA27330.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248433|gb|EGA32368.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252539|gb|EGA36382.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255436|gb|EGA39202.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260838|gb|EGA44440.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267575|gb|EGA51058.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270995|gb|EGA54426.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623182|gb|EGE29527.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|332988596|gb|AEF07579.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 389

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
            + + A    + +++        R  AV  L        D  +A  Y  A    +   D 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136

Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242
                   + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM
Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     +      NS   SI   +  +++    KA   L+++   +           L
Sbjct: 197 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 247

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351
           +SE          +L +  + +      V     +   L +  I +A   +  A      
Sbjct: 248 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 307

Query: 352 -MKIAPRKEIF-LLL 364
            ++  P   +F  L+
Sbjct: 308 QLQRHPTMRVFHKLM 322


>gi|323156206|gb|EFZ42365.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|189236217|ref|XP_971516.2| PREDICTED: similar to AT30101p [Tribolium castaneum]
          Length = 913

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 16/170 (9%)

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A +QQ   A+ W +A   LN +  +           +    L   +      +     ++
Sbjct: 739 ARLQQDEEAERWYQA--ALNAQPDHVPAH-------ITYGKLLAKNVSRTAEAEQWFRKA 789

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTVGKL 311
            +L            + L S+ + ++A V+ EK  ++ PH  E+A      + +   G+ 
Sbjct: 790 QRLAPQEPSVYHHYGEFLASRRRYKEASVMYEKAAELRPHDYELAVAAATAMRQ--AGRH 847

Query: 312 KRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           + A R       +      S   +  I    G   +A +    A+++ P 
Sbjct: 848 QEAERWYRTAVDLKPSDARSHTNLGAILHLNGKYSEAASSYKEALRLQPD 897


>gi|157155956|ref|YP_001463871.1| TPR repeat-containing protein [Escherichia coli E24377A]
 gi|157077986|gb|ABV17694.1| tetratricopeptide repeat protein [Escherichia coli E24377A]
          Length = 1124

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 654


>gi|160883803|ref|ZP_02064806.1| hypothetical protein BACOVA_01775 [Bacteroides ovatus ATCC 8483]
 gi|156110888|gb|EDO12633.1| hypothetical protein BACOVA_01775 [Bacteroides ovatus ATCC 8483]
          Length = 676

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189
           + Y+ A E LE +L++    TR + +      S +  D  +A     KAL++    P  W
Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+V+      +++ A    N+        +   A   I R+L    + ++  +  D 
Sbjct: 196 AARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249

Query: 250 IESLKLCDN 258
             +L +  N
Sbjct: 250 DLALDIDPN 258


>gi|10434572|dbj|BAB14303.1| unnamed protein product [Homo sapiens]
 gi|10435092|dbj|BAB14485.1| unnamed protein product [Homo sapiens]
 gi|119630617|gb|EAX10212.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_g [Homo sapiens]
          Length = 564

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 197 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 256

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 257 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 316

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 317 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 375

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 376 RAIYELAI 383


>gi|302819283|ref|XP_002991312.1| hypothetical protein SELMODRAFT_448389 [Selaginella moellendorffii]
 gi|300140892|gb|EFJ07610.1| hypothetical protein SELMODRAFT_448389 [Selaginella moellendorffii]
          Length = 434

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 68  CPAMLFHM--LHKRNYDKGYK---ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
            P+         KRN D+  +   ++   L +IA  +   A    S V +        L 
Sbjct: 68  DPSAALRYSERSKRNADRATQYERSVMEALDAIAEGSYDKALSSQSKVLENFPKD---LA 124

Query: 123 YLLEVQI-ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD-LNSAQRYATKA 180
            L   Q  A +  + ++  +    +L +   R + +Y +   S    D  + A+  A +A
Sbjct: 125 SLKRAQAMAFSRGKSHLMLKFASQVLHVNRDRAY-MYGMLAFSLVENDRTDEAEVAARRA 183

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           L I     W   A+   +   +++  AI F+   
Sbjct: 184 LSIEKHDVWAQHALCHVFQERQQYKDAIMFMESN 217


>gi|255600764|ref|XP_002537530.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
 gi|223516024|gb|EEF24853.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
          Length = 450

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 4/169 (2%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L+    +A      A       L +      A  +L +   R G    A+ +  +A+ + 
Sbjct: 10  LDANHLMAAGDDAGAEHCYLQALALQPWHVAARANLGYLKERQGAEAEAEFHYRQAIALV 69

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           PD   + + +       K  + A   L      A E        L           +   
Sbjct: 70  PDHAQLHQNLGALLFKEKRLTEAEASLRTAVSLAPESPTP----LSQLGAVLVCMHNEPE 125

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
                  +L L  +   A    +  L+ Q +  +   +L+  W+ +  P
Sbjct: 126 GEDCYRRALALDPDHARAQFNLSYLLLRQARFDEGWRMLDARWQFDHFP 174


>gi|167534895|ref|XP_001749122.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772275|gb|EDQ85928.1| predicted protein [Monosiga brevicollis MX1]
          Length = 712

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 16/191 (8%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-----AKEWNRNRAILLIAR 232
            K +  +P         ++      + ++A     +   N      K + R    L +  
Sbjct: 359 EKEIKENPHNYDAWFDYIRLAESEGDVAKARDIYERAIANVPLDQDKRYWRRYIYLWVYY 418

Query: 233 SL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
           ++ E     D   +       L+L            + AA+  I Q   + A  +L +  
Sbjct: 419 AVFEELTAKDADRTRAVYQACLQLLPHKTFTFAKVWLYAAQFEIRQKNLKAARQLLGRSL 478

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQ 343
            + P  ++   Y  L  E  + +  R   L       N  + ++ V  +++   +G  ++
Sbjct: 479 GLCPKDKLYKGYIELELE--LREFDRCRTLYNKYLEFNPATCQTWVQYAELEAVLGDYER 536

Query: 344 AHAKAMLAMKI 354
           A A   LA+  
Sbjct: 537 ARAIFELAIDQ 547


>gi|113476762|ref|YP_722823.1| hypothetical protein Tery_3235 [Trichodesmium erythraeum IMS101]
 gi|110167810|gb|ABG52350.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 734

 Score = 41.1 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 66/168 (39%), Gaps = 11/168 (6%)

Query: 123 YLLEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            LL+ Q        + + A      +++I     +A  +L     + G+L+ A  Y  ++
Sbjct: 10  QLLK-QANQLKRAGRLDEAIALYYQVIEINPNFAWAYNNLGDALVKQGNLDEAVAYYFES 68

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L ++P++ W+   + +          AI +L +  K   ++ +  + L    +       
Sbjct: 69  LKLNPNSAWLLYGLGEALAKQGNLEAAIEYLQKAIKTKPDFYKFYSCLGFILA----ANN 124

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE 284
           ++  +  +  +SL+L  N   +    ++ LI +    +A       +E
Sbjct: 125 NLNEAVVNIYKSLRLNKNCWWSHYFLSQLLIEKGDLHEAFYNYAKAIE 172


>gi|332702647|ref|ZP_08422735.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552796|gb|EGJ49840.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 206

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 9/181 (4%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A   + Q ++  +      A     ++      G +  +      +L+L  +   A +
Sbjct: 7   DEARKTIEQAQRELEVLP--DAQAYYNQATAELYLGRIEDAASHFRHALRLKPDFAAAWV 64

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEE 319
               +L+   K  +AE   ++  + +  P++   Y      HL         +   +   
Sbjct: 65  NLGGALLRLGKLEEAEAANKRAIEAD--PDLTAGYLNLGLIHLNRGEWEEAARIYEQALS 122

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           ++  + E+   +    L+  ++D+A  + M A+   P       L     A   +     
Sbjct: 123 LDMLNPEAHASLGMAYLKTDNLDKAIEEGMKAIGQRPGFGAAYELVCAAYAEQGDNAAAN 182

Query: 380 Y 380
            
Sbjct: 183 A 183


>gi|322500179|emb|CBZ35255.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1569

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 27/204 (13%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRN 224
            D   A     +A  + P    V E V   +V + ++++        +      A E +  
Sbjct: 1112 DPELAATLYERAAAVCPTYLEVAEVVADVFVQSGDYAKGSVYMKRVMRANPSAATEMHMR 1171

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVI 282
             A L    + +    G  +      ++ L +    + A+  A     L + N       +
Sbjct: 1172 LARLGTGSAWDTMSHGQRMEVMEHLLKGLGVAPERVAAAFAAGVQSQLTNANNTNVVMSL 1231

Query: 283  LEKIWKVNPHPEIANIYTHLLSENT--------------VGKLKRALRLEEIN-KESVES 327
                      P + +      SE+                  L R  R   +   +    
Sbjct: 1232 GNLA------PLLLDGVATATSEDAVCFATYVVQTRFQEPQLLNRMYRRALLRFPQHATI 1285

Query: 328  LVIVSKIALEMGSIDQAHAKAMLA 351
            LV  + + +  G    A      A
Sbjct: 1286 LVNYATLCMHSGCHTLARKYIAKA 1309


>gi|307182081|gb|EFN69459.1| Intraflagellar transport protein 172-like protein [Camponotus
            floridanus]
          Length = 1735

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 80/314 (25%), Gaps = 57/314 (18%)

Query: 94   SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT- 152
             + + +   A   H    +         V +   +      ++  A      +    A  
Sbjct: 954  HVQSGDWMRA---HQVAQEYMKSDEANQVLMRHAESLQQAGEFRHAEALYVAIGDYDAAI 1010

Query: 153  ---REFAVYSLYFE--SCRIGD--LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
               R+           +    D    +    A + LD +       E  +     A +W 
Sbjct: 1011 AMYRKAGHRGDMIRLVAEHRPDLLQTTHAHLARE-LDAAGKPREAEEHFLG----AGDWR 1065

Query: 206  RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMAS 263
             A                 R++ +   +L  A K     +      + +  L        
Sbjct: 1066 GA-------------VTAYRSVNMWEDALRVAKKASGEKAAQQVALMWARTLAPEL---- 1108

Query: 264  ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
               A+ L+  N     +  L+   + +    +      +    TV + K       +  E
Sbjct: 1109 --GARLLMRLN---YLDPCLQLACEAS----LFEWALEIAKYGTVDQKKEIHYRHAMALE 1159

Query: 324  SVESLVIVSKIA-LEMGSIDQA---------HAKAMLAMKIAPRKEIFLLLAQ--IEQAN 371
              E     ++   ++ G I +A            A    +   ++ +  +L     E A 
Sbjct: 1160 D-EGRFAQAEKEFVQAGKIMEAVQMYIHNRDWESAEDVARSHSQEAVAQVLIARAAEAAE 1218

Query: 372  SHNTDKILYWTQSA 385
              +          A
Sbjct: 1219 GQDYATAEALLLRA 1232


>gi|241765396|ref|ZP_04763368.1| Methyltransferase type 12 [Acidovorax delafieldii 2AN]
 gi|241364873|gb|EER59832.1| Methyltransferase type 12 [Acidovorax delafieldii 2AN]
          Length = 436

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 41/212 (19%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +   +   A   LN+ +       R   +      L     G++  ++     S+ L  
Sbjct: 19  QIAKNDLKNAALTLNKAQAVVPNDPRVFMLA----GLMAEKSGNIKGAFEALRRSVSLAP 74

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----------------HPEIANIYT 300
           +     +  A  L  QN+ ++A    EK+ K+ P                 H E+A  + 
Sbjct: 75  DWGPGLLELALLLARQNQFQEAVETAEKVAKLEPKNLQVLAGVIDIAHRAGHAEMAVRHL 134

Query: 301 ----HLLSENTVGK--LKR--------------ALRLEEINKESVESLVIVSKIALEMGS 340
                L+  + + +  L R                 L   N    ++LV   +  +  G 
Sbjct: 135 RRGLELVPGDAMLRRLLARDLSEQGKHEESVAMWTTLVAENPADPQALVGRVQACIASGQ 194

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
             QA A     + +AP   ++   AQ+ +  +
Sbjct: 195 PAQALADTQALLALAPDDAVYQYYAQLARGET 226


>gi|259908340|ref|YP_002648696.1| tetratricopeptide repeat protein [Erwinia pyrifoliae Ep1/96]
 gi|224963962|emb|CAX55467.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
 gi|283478280|emb|CAY74196.1| Uncharacterized protein yciM precursor [Erwinia pyrifoliae DSM
           12163]
          Length = 389

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 25/248 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  A+  L  +    G  + A+             +S
Sbjct: 83  GEVDRAIRIHQALMESDSLTYDQRLLAIQQLGRDYMAAGFYDRAEHMFGQLVDETDFRLS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W  AI    +  K  K       A      +L+     D+ 
Sbjct: 143 -----ALQQLLIIHQATSDWLNAIDAAERLIKLGKSRLGMEIAHFYCELALQAMSSDDLE 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297
            +     +      NS   SI   +  I++ +  KA    + ++E  K         + +
Sbjct: 198 RAMSLLKKGEAADRNSARVSIMMGRIHIAKAEYAKAVQHLQRVIEQDKELVSETLEMLES 257

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y HL        +    R  E N  +  + + ++ I  +    + A       ++  P 
Sbjct: 258 CYQHLEQGPAW--VNYLERCVEENTGAA-AELYLAGILDQQDGAEAAQTYITRQLQRHPT 314

Query: 358 KEIF-LLL 364
             +F  L+
Sbjct: 315 MRVFHRLM 322


>gi|205374228|ref|ZP_03227027.1| YrrB [Bacillus coahuilensis m4-4]
          Length = 221

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 60/178 (33%), Gaps = 7/178 (3%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L +Q+   E +   A +     ++          +       +G+   A+ +  KA+++ 
Sbjct: 6   LGIQVLQ-EGKMEEALKLFTEAIEENPGDSVGYINFGNVLSSVGETVRAKIFYEKAIELD 64

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P A     A+       +++S A     +  +   E        +   ++   D      
Sbjct: 65  PKAGAAYYALGNVLFQEEKFSEAKDQFEKAIRTGME--NGDVYFMFGFTMVQLD--QPKL 120

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           +      +++L    + A      +L    +  +A   L  +  V   P+ A+ Y +L
Sbjct: 121 AMPYLQRAVELTPEDVEARFQYGLTLAGLEEIDEAVKQLLLV--VEQQPDHADAYYNL 176


>gi|162454729|ref|YP_001617096.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56']
 gi|161165311|emb|CAN96616.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56']
          Length = 947

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 52/165 (31%), Gaps = 22/165 (13%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +E    LL         +   A +  + ++ +      A   L     R+ D ++A +  
Sbjct: 152 DEVATRLLRA------GRDRDAIDIFKRVVDLDPNNPLAYLRLAEALIRVRDYDAAIQRF 205

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             A ++          +++          A+  + +  ++  +    R    I   L+  
Sbjct: 206 GTAAEL----------LLKL----GRRDDALKVVERLLQHRPDARFARMAAEIY--LDRG 249

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           D  D +++      + K     +      A++     +  KA  +
Sbjct: 250 DPSDGMSALTKLQIAFKENPKDLETLALLARAFDLLGQPAKAIEV 294


>gi|161523696|ref|YP_001578708.1| TPR repeat-containing protein [Burkholderia multivorans ATCC 17616]
 gi|189351540|ref|YP_001947168.1| hypothetical protein BMULJ_02743 [Burkholderia multivorans ATCC
           17616]
 gi|160341125|gb|ABX14211.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia multivorans
           ATCC 17616]
 gi|189335562|dbj|BAG44632.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 607

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 16/181 (8%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K+  + + NR    +A + +     D   +      +L++  + + A++     L    
Sbjct: 204 LKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRRALQIRPDYLPAALM----LSQMG 259

Query: 275 KKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
              +A  I      V  +P+     +A    +L  +      K+   + +++ +    L+
Sbjct: 260 PAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLM 319

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQ 383
            ++ I ++   +D A A     +++  ++      + ++ LAQI      N  +   W  
Sbjct: 320 ALALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYLAQI-AIEQGNDAQASQWLD 378

Query: 384 S 384
            
Sbjct: 379 K 379


>gi|332702514|ref|ZP_08422602.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552663|gb|EGJ49707.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 207

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 6/124 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222
           + + GDL     Y   A    P  P V  A +   ++       AI    Q  K  K+ N
Sbjct: 69  AMQRGDLEGCLHYNEIAAKNMPLFP-VPYANMGFVHMQRGNVDEAIKAFKQAIK--KDAN 125

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +AI  +  +L    KGD+  S   +  +L++  N   A    A   + +    KA   
Sbjct: 126 FVQAIASLGGALYM--KGDLDESEGYSKRALEIEANFGPALNNLALVELERGNHAKAREY 183

Query: 283 LEKI 286
           +E+ 
Sbjct: 184 VEQA 187


>gi|257457795|ref|ZP_05622956.1| TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257444845|gb|EEV19927.1| TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 311

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
               A      + A E     L +  +    +Y++     + GD+ +A+ Y      +  
Sbjct: 170 RGMAASLLGDTDKAIEAFTQALAVNPSDFV-LYAVAENYKKKGDIQNAKLY------LFE 222

Query: 186 DAPWVTEAVVQQYVL---------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                 +AV++               +   A+   N   +  K+ N   A       L  
Sbjct: 223 TIKKTGDAVLEVRCRNQLGLLFLEENKPEEALEQFNTVLE--KDANSADA--HYGLGLIY 278

Query: 237 ADKGDMIASYHDAIESLKLCD 257
             +GDMI + ++   +++L  
Sbjct: 279 EMQGDMIKARYEWRSAIRLNP 299


>gi|257086752|ref|ZP_05581113.1| hypothetical protein EFLG_00343 [Enterococcus faecalis D6]
 gi|256994782|gb|EEU82084.1| hypothetical protein EFLG_00343 [Enterococcus faecalis D6]
 gi|315027274|gb|EFT39206.1| tetratricopeptide repeat protein [Enterococcus faecalis TX2137]
          Length = 418

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 91/305 (29%), Gaps = 25/305 (8%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PAT 152
           ++ A N+  A+ M     ++       L  L   +  L+      A +  + +L+  P  
Sbjct: 10  ALQAENLAEAQLMFEEALKKD--DENTLADL--GETLLSLGFLEEAKQIFQQLLEQFPDA 65

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---T 209
               +  L   +    +++ A  Y  K        P  +++ VQ  ++  +  + +    
Sbjct: 66  DGLNIP-LAEIAIENNEIDDAFIYLEK-------IPETSDSYVQSLLVTADLYQVLGIPE 117

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               K K A        ++  A        G  + +       ++     I A     + 
Sbjct: 118 VSEAKLKEAANLMPEEPLIQFALGELYFTNGQFVEAITRYQSIVESGTAQISAISLNERL 177

Query: 270 ---LISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINK 322
                      +A   LE   K     +    +A  Y  L        +    +L+ +N 
Sbjct: 178 GSSYSMLGDFEEAVPYLEAAVKEEQTDDRLFQLAFTYLQL--HENQKAIALFQQLKTLNP 235

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
                 + +++   E   +D+A A     +   P +      A       H+      W 
Sbjct: 236 HYQSLYLYLAEALQEEEQLDEAKAVIEEGIAENPFQVELYQFASENAYRLHDIAGAENWL 295

Query: 383 QSALH 387
             AL 
Sbjct: 296 LKALE 300


>gi|126654199|ref|ZP_01726000.1| hypothetical protein BB14905_09575 [Bacillus sp. B14905]
 gi|126589338|gb|EAZ83492.1| hypothetical protein BB14905_09575 [Bacillus sp. B14905]
          Length = 219

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A  +++Y  A +     ++          +       + D   A+R+  KA+ +   A  
Sbjct: 10  AFQDKRYEEAAQLFTKAIEAEPENAIGYVNFGNLLAVLEDTERAERFFQKAITVDETAAT 69

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y  A+ ++ A+    Q  K+  E     A +            +   +    
Sbjct: 70  AYYGLANLYYNAERYAEAVKLYEQALKHHIEG----ADVYYMMGKCFERMENPKLALPYL 125

Query: 250 IESLKLCDN-----SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLL 303
             ++++           + +  A  +  Q K ++ ++++E+ W   + H  +  +Y  + 
Sbjct: 126 QRAVEIAPEDTQIRLAYSIVLCALEMFEQGK-KELDLLIEQDWNNADAHYNLGVLYA-VS 183

Query: 304 SENTVGKLKRALRLEEINKESVESLVI 330
           +E T   +    +   +  E  ++  I
Sbjct: 184 TEQTEDAMYHLKQAFTLQPEYDQARYI 210


>gi|31874611|emb|CAD98046.1| hypothetical protein [Homo sapiens]
 gi|117646410|emb|CAL38672.1| hypothetical protein [synthetic construct]
          Length = 914

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 72/190 (37%), Gaps = 8/190 (4%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +  KK  A+    +  + +   +L  A++  +  +     +++ +  +   A I   +
Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571

Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324
            L+  NK  KA E  L+ +     + ++       H+  +     LK   R  E+N +  
Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHK 631

Query: 325 --VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYW 381
             + + VIV + + E+    +A  + +  +   P     +  L  +   +  + +    W
Sbjct: 632 LALFNSVIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-AEIW 690

Query: 382 TQSALHAMPD 391
            + A+    D
Sbjct: 691 MKKAIKLQAD 700


>gi|56962453|ref|YP_174179.1| hypothetical protein ABC0679 [Bacillus clausii KSM-K16]
 gi|56908691|dbj|BAD63218.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 648

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 12/137 (8%)

Query: 126 EVQIALAERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           + Q  L   Q   A        ++  + P    + +  +Y+   R  D  +A     + L
Sbjct: 203 DAQAYLRNDQLEAAKAAIDRAFQLFARDPD--LWHLKGVYY--LRNNDYRAALHMFQEKL 258

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            +SP  P       Q +   K++   I   +Q       ++ +    L  +   + +  D
Sbjct: 259 ALSPADPDGLLYSAQLHFHFKDFQSVIADCDQLLA----YHEHHVEGLFLKIKGHLELND 314

Query: 242 MIASYHDAIESLKLCDN 258
            + ++    ++++L  +
Sbjct: 315 EVTAHQWIEKAIELHPD 331


>gi|87312286|ref|ZP_01094384.1| probable O-linked GlcNAc transferase [Blastopirellula marina DSM
           3645]
 gi|87284990|gb|EAQ76926.1| probable O-linked GlcNAc transferase [Blastopirellula marina DSM
           3645]
          Length = 322

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 56/143 (39%), Gaps = 13/143 (9%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +   A + +     +  +GD   +    +++++   +++ A +  A+ L  Q K   A  
Sbjct: 94  DHLNAAVYLGSGRMHEQQGDFDGAAKQYLKAIEEYPDNLYALLSYARLLDRQGKSPAALE 153

Query: 282 ILEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSK 333
             +K      HP+ A     L          ++ +  + +A  +E  NK    +   ++ 
Sbjct: 154 YYQKA--AAAHPDSAVAMNDLGLCYLKSKRFDDAMSAIYKATTIEPENKRYRNN---MAS 208

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
             ++   +++A ++   A   AP
Sbjct: 209 ALVDANRLEEAFSQLEYAHGAAP 231



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 8/161 (4%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             +  ++ A ++    ++      +A+ S      R G   +A  Y  KA    PD+   
Sbjct: 109 EQQGDFDGAAKQYLKAIEEYPDNLYALLSYARLLDRQGKSPAALEYYQKAAAAHPDSAVA 168

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   Y+ +K +  A++ + +      E  R R    +A +L +A++        +A 
Sbjct: 169 MNDLGLCYLKSKRFDDAMSAIYKATTIEPENKRYR--NNMASALVDANR------LEEAF 220

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             L+    +  A       L  +   + A V L    + +P
Sbjct: 221 SQLEYAHGAAPAHYNLGYLLYKRGDAQLARVHLNMAIEKDP 261


>gi|271962301|ref|YP_003336497.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
 gi|270505476|gb|ACZ83754.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
          Length = 1118

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 24/195 (12%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD   A   A +AL +     W   A  +      EW+       ++ +      R
Sbjct: 116 AIASGDGARALDLADRALAL-----WQGPAYAEF--ADAEWAEPEATRLEELRLVAVECR 168

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L + R+ E   +   + ++     +++L     +A   A +   +    RKA   L
Sbjct: 169 AEARLTLGRNAEIELEQH-VRAHPLRENAVRL---LALAYYRAGRQADALAAIRKARETL 224

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                V+P P +  + T +        L  A  L      +  S       A+       
Sbjct: 225 AAELGVDPGPALRALETDI--------LAHAGSLNRQEPAAPGSP-----AAIRAPERAA 271

Query: 344 AHAKAMLAMKIAPRK 358
           +      A + APR+
Sbjct: 272 SRGAGEAAKRDAPRE 286


>gi|154339838|ref|XP_001565876.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063194|emb|CAM45394.1| conserved hypothetical protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1412

 Score = 41.1 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 23/202 (11%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRN 224
            D   A     +A ++ P    V E V   +V + ++++   ++ +  +         +  
Sbjct: 955  DPRLAATLYERAAEVCPTYLEVAEVVADVFVQSGDYTKGFAYMKRVIRANPSAATEMHMR 1014

Query: 225  RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             A L    + E    G+ +      ++SL +    + AS  AA++   +     A  I  
Sbjct: 1015 LARLGTGTAWETMSYGERMEVMEHLLKSLGVAPERV-ASAFAAEAKRLEGN---ANKINM 1070

Query: 285  KIWKVNPHPEIANIYTHLLSENTV--------------GKLKRALRLEEIN-KESVESLV 329
             +   N  P + +     +SE+ V                L R  R   +   +    LV
Sbjct: 1071 TMSLGNLAPLLLDGVASCMSEDAVCFATYVVQTRFQEMQLLNRMYRRALLRFPQHATLLV 1130

Query: 330  IVSKIALEMGSIDQAHAKAMLA 351
              + + +  G    A      A
Sbjct: 1131 NYATLCMHSGYHTLARKYIAKA 1152


>gi|238064374|ref|ZP_04609083.1| serine/threonine protein kinase [Micromonospora sp. ATCC 39149]
 gi|237886185|gb|EEP75013.1| serine/threonine protein kinase [Micromonospora sp. ATCC 39149]
          Length = 774

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 33/117 (28%), Gaps = 5/117 (4%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+++A  ++  A     +         E    L     A        A      + + 
Sbjct: 554 HGLLALARSDVDDA--TARFDRAYGELPGEVAPKLALGYCAEQRGDAVEATRYYRAVWRR 611

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             +   A + L       GD  +A ++      +S        A V+      +W  
Sbjct: 612 DRSAASAAFGLARLRLAAGDREAAVQFLDGVPRVSRHYDAAQVAAVRVLA---DWLG 665


>gi|148654221|ref|YP_001274426.1| protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1]
 gi|148566331|gb|ABQ88476.1| Protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1]
          Length = 490

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATK 179
           +L   Q  L   + + A E    +  IP     A  +L   +      G+L+ A     +
Sbjct: 331 HLDRAQALLDAGRLDDAMEV---LRTIPPNSSLAPRALTLVARVHANRGELDLAIAEVRR 387

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL+I          +   YV   +W  AI  L + +    +     A++    ++     
Sbjct: 388 ALEIDALRDDAYLLLGTMYVRQGQWHDAIQSLERARYLNPDA----ALVSYHLAMAYRQA 443

Query: 240 GDMIASYHDAIESLK 254
           G    +  +   +L+
Sbjct: 444 GKKELAAREFRSALR 458


>gi|30249569|ref|NP_841639.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30138932|emb|CAD85511.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 569

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 71/248 (28%), Gaps = 34/248 (13%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL  GL+S    ++  A K       Q  F +   ++    +I    +    A +    +
Sbjct: 288 ALAIGLLSAELDDLGSAEKYFKRAL-QLGFEDTNTIHFNLGRIHEIAQHNAEAMDAYLRV 346

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYAT----------------KA--------LD 182
                     V   +  + R G + +A+RY                  +A          
Sbjct: 347 TGGERYIAARVRYAFLLAKRDG-IAAARRYLKTVQVENEQQRTQLLISEAQLLRDSGEFR 405

Query: 183 ISPDAPWV-------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            + D              ++    L  +    +  L Q  +   E   + A    A    
Sbjct: 406 GAYDLLDAYLRKYPDQVELLYDRALMADKIGKLDVLEQDLRKLIELRPDNAHAYNALGYS 465

Query: 236 NADKG-DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            A++G  +  +     ++++L  +                  +K    L+  +     PE
Sbjct: 466 LAERGLQLPEALALIQKAIELSPDDPYIMDSLGWVYYRMGDLKKGVNYLKLAFDTRSDPE 525

Query: 295 IANIYTHL 302
           IA  Y  L
Sbjct: 526 IAAHYGEL 533



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
           LK   +L     +  E+   VS+ A        A      A+++ P  E    +A + Q 
Sbjct: 170 LKLVQQLAASYPDLPEAHFAVSQAAWSANEFKLAAKAMNQALELRPEWE----MAAVHQG 225

Query: 371 N 371
            
Sbjct: 226 Q 226


>gi|284928935|ref|YP_003421457.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A]
 gi|284809394|gb|ADB95099.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A]
          Length = 365

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 66/211 (31%), Gaps = 35/211 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              + A       +Q+      +   L     R  D + A     + + + P+ P +   
Sbjct: 123 GDNDNAATAYYYAVQLNPKSVKSYIGLGVVLLRKEDYDGAAEAYRRVMTLEPNNPNIFSI 182

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +    +  KE+ +AI +L    K        R +L  A       +G + +   +   + 
Sbjct: 183 MGASLLQQKEFKQAIKYLKSAVKQFPRDTELRMLLATA----LLQQGQIFSGKEELRIAE 238

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           K+   ++   +  A  L  QN   +A  I                               
Sbjct: 239 KIDPKNLKIQLKIAGILEIQNNLEEALKI------------------------------- 267

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             R+   NK+S E+ + + +I +      +A
Sbjct: 268 YKRISYFNKQSSEAHMGIGRIQMAQKDFLRA 298


>gi|282899920|ref|ZP_06307881.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281195190|gb|EFA70126.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 302

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 62/206 (30%), Gaps = 23/206 (11%)

Query: 88  LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           L  GL +IA     +  +A +  + +       +  L   L  Q    +     A    +
Sbjct: 48  LNKGLKAIAEGKVQDAIIAFRQAAQLDPALAPAHYNLGLALR-QTGKLQ---PAADAFYQ 103

Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                P   +    +     E     +L  A  Y   AL + P   +    +     L K
Sbjct: 104 ATQADPQFASAFANLGGALLE---GNNLPLAIDYLKTALQLDPKLGFAHYNLGLARQLQK 160

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           +W +AI    Q    +   N    +  +        +G +  +    I+++ L  N   A
Sbjct: 161 DWQQAIASFQQAIIYSP--NSAEPVYHLGNC--YLQQGKLELAKSTFIKAISLNSNYTEA 216

Query: 263 SICAAKSLISQNKK-------RKAEV 281
                  L  Q +        RKA  
Sbjct: 217 HYNLGLILFEQGQLQDSLSAFRKAAQ 242


>gi|229175069|ref|ZP_04302587.1| TPR domain protein [Bacillus cereus MM3]
 gi|228608437|gb|EEK65741.1| TPR domain protein [Bacillus cereus MM3]
          Length = 219

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205


>gi|320646340|gb|EFX15267.1| hypothetical protein ECO9389_06873 [Escherichia coli O157:H- str.
           493-89]
 gi|320651520|gb|EFX19907.1| hypothetical protein ECO2687_14881 [Escherichia coli O157:H- str. H
           2687]
 gi|320657231|gb|EFX25040.1| hypothetical protein ECO7815_13394 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662837|gb|EFX30169.1| hypothetical protein ECO5905_01061 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667641|gb|EFX34556.1| hypothetical protein ECOSU61_20648 [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|156364414|ref|XP_001626343.1| predicted protein [Nematostella vectensis]
 gi|156213216|gb|EDO34243.1| predicted protein [Nematostella vectensis]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 52/368 (14%), Positives = 113/368 (30%), Gaps = 50/368 (13%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A +  + +L+           L   +   G +  A  +  +AL I+ D P     +  
Sbjct: 513 DKAEQLYKNILREHPNYVDCYLRLGCMARNRGQIYEASDWFKEALQINQDHPDAWSLIGN 572

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAI 250
            ++  +EW        +  K     N   ++L +             DK         A+
Sbjct: 573 LHLAKQEWGPGQKKFERILKQPSTANDAYSLLALGNVWLQTLHAPTRDKAKERRHQDRAL 632

Query: 251 ----ESLKLCDNSIMAS-----ICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIA 296
               + L+    ++ A+     I A K  I + +      R+A   +  +W       +A
Sbjct: 633 AMYKQVLRNDSRNLYAANGIGCILAHKGYIREARDVFSQVREATADVPDVWLN-----LA 687

Query: 297 NIYTHLLSENTVGKLKRALR-LEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +IY       +   ++     L +  K   VE ++ +++     G +       + A  +
Sbjct: 688 HIYVEQKQYVSA--IQMYENCLRKFFKHHSVEVMLYLARAYYRAGKLKDCKRVLLKARHV 745

Query: 355 APRKEIFL---------LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVW 405
           +P   I L         L   I +A   +   +L        A  +  W+S  G      
Sbjct: 746 SPNDTILLFNVSLVQQKLATGILRAEKSSLKVVLGAVGELEQAQRNFTWLSRHGDRM--- 802

Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465
                         W                + +  A   D+ +  L   ++    ++++
Sbjct: 803 --------KFD-LAWAAYESRHTSDLLSQAQYHVSRARKLDEQEQELRRKQEAEKEALRR 853

Query: 466 VSSFEDST 473
               E+ +
Sbjct: 854 SKEEEERS 861


>gi|76803894|gb|ABA55837.1| fimbiral biogenesis and twitching motility protein [Vibrio sp.
           DAT722]
          Length = 238

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 24/201 (11%)

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASY 246
                A+   Y+      RA   L Q   +A ++ R   ++     ++   DK + +   
Sbjct: 36  AESRIALGLGYLENGNMIRAHDNLQQALAHAPQYYRTQLSMAHYYETVGEVDKAESMYKR 95

Query: 247 HDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI-----WKVNPHPEIANIY 299
               +  K        ++       L  Q K  +A+ +  +      + + P       +
Sbjct: 96  SL-RQHTKN------GNVLNNYGTFLCKQGKYEQADKMFTRAIEQPYYYLIPASYENAAF 148

Query: 300 THLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---- 354
             L S+    + K    R  + +    +S++ ++K+ ++ G    A  + M   +     
Sbjct: 149 CALKSQQP-ERAKYYFERAIDHDPHRPKSILQLAKLEIDDGEYTDARIRLMRFHQTYGLK 207

Query: 355 APRKEIFLLLAQIEQANSHNT 375
            P      L+ ++E+A  ++ 
Sbjct: 208 KP---SLQLMVELERAAGNDA 225


>gi|67923685|ref|ZP_00517153.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854485|gb|EAM49776.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 530

 Score = 41.1 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 86/281 (30%), Gaps = 21/281 (7%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
            GL+         A  + SY        +  L +           +++ A     + +  
Sbjct: 248 KGLIHTQQAEYEAA--IASYDKALQLTPDYDLAWNNRGIALANVGRFDKAIASYDKALQL 305

Query: 149 IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            P   E      +       G  + A     KAL + PD                    A
Sbjct: 306 TPDKDEAWCNRGIAL--FNRGRSDEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDEA 363

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I   ++  +   + +  +A      +L     G    +     ++L+L  +   A     
Sbjct: 364 IASYDKALQLKPDDH--QAWNNRGYALRQL--GRFDEAIASYYKALQLKPDYYEAWHNRG 419

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEE------I 320
            +L    +  +A    +K  ++   P+    + +      + KL R    +        +
Sbjct: 420 IALRKLGRFDEAIASYDKALQLK--PDYHQAWHN--RGIALRKLGRFDEAIASYDKALQL 475

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             +  ++          +G +D+A A    A+++ P +EI+
Sbjct: 476 KPDDHQAWYNRGIALGNLGRLDEAIASFDKALQLKPDEEIY 516


>gi|301615540|ref|XP_002937236.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 5-like [Xenopus (Silurana) tropicalis]
          Length = 515

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 20/157 (12%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE--AVVQQYVLAKEWS----RA 207
              +Y  Y E         A+    KAL + PD P +    A+V   + ++ +       
Sbjct: 174 LLTLYGKYCE--------RAKECFEKALVLDPDNPELNSGYAIVMYRIESQHYRVYGTGE 225

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            T L    K A   N N  ++    +L+    G          E+L+   +S      AA
Sbjct: 226 CTSLEL-LKRAVTLNENDTVIKALLALKYVYLGQAEEGEKIIEEALRQTPDSPYLLRYAA 284

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299
           K      K   A  IL+K     P     H +I   Y
Sbjct: 285 KFYRIVGKTGDAITILKKALNQTPTSCSLHHQIGICY 321


>gi|262280063|ref|ZP_06057848.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262260414|gb|EEY79147.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 569

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 102/323 (31%), Gaps = 35/323 (10%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
            T  + + + +  +  +        H+F    L   +  + ALA      A     ++  
Sbjct: 16  STTFLLLGSMSSHVYARPVQETYAVHSFDQ-ALEQTMVAEFALAYDDIPNALHNYTVLAI 74

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
              +      +L   +    D  +A   AT  +   P        +    +   E+  A 
Sbjct: 75  KSNSTSIKQRALDV-ALEYNDFQAALNIATHWVAQEPKDVPALFYLSHIALKTHEYQLAA 133

Query: 209 TFLNQKKKNAKEWNRN-------------RAILLIAR---------------SLENADKG 240
             L++  K     +               R +LL A                +   A  G
Sbjct: 134 ETLDKILKIDPTADLEQILASIAPENAQDREVLLTALRSSSEKDNPSILALIANLEAQNG 193

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVNPHPEIAN 297
            + ++  +  ++L+         +  A  LI+ + +  A     K    +K N    +A 
Sbjct: 194 QLESALTNINKALRRRPKVTSFILMKANLLIALSDQEGALKWYAKSSRKYKKNLDIRLAE 253

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           I   +    +   L++   + E N ++ E+L I    ++++   D+A    +     A  
Sbjct: 254 IRYLIQLNQSQLALEKLENVIEANPKAEEALFIAGLTSIDLKQYDKAEQYLVDLRNSAKY 313

Query: 358 K--EIFLLLAQIEQANSHNTDKI 378
           +    + L    E+   + + K 
Sbjct: 314 QNEAYYYLAINAERKQHYESAKA 336



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 389 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 446

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 447 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 488


>gi|296825692|ref|XP_002850854.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480]
 gi|238838408|gb|EEQ28070.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480]
          Length = 735

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVL- 200
           Q P          Y +    GD + A ++  +AL + PD+  +       + +++     
Sbjct: 434 QDPDAIFLRGRLFYLQ----GDNDQAVKHFKRALSLDPDSSKIIKCLRMVQKLLRIKDEG 489

Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                ++++  AI    +  +         + LL  R+  + +      +  D  ++L+ 
Sbjct: 490 NAAFKSRKYREAIDLYTRGLEVDPSNKDINSKLLQNRAQAHININQFEKAIDDCTKALEC 549

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               + A    AK+        +A   L+ I + +P
Sbjct: 550 DPTYLKARRVRAKAYGGAGNWDEAVKELKDIAENHP 585


>gi|119629446|gb|EAX09041.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_b [Homo sapiens]
          Length = 524

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+     E+++L    
Sbjct: 243 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 298

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 299 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 351


>gi|119581193|gb|EAW60789.1| DnaJ (Hsp40) homolog, subfamily C, member 7, isoform CRA_b [Homo
           sapiens]
          Length = 443

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    +  A ++  
Sbjct: 128 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 183

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 184 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 243

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+
Sbjct: 244 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 303

Query: 287 WKVN 290
           ++  
Sbjct: 304 YQTE 307


>gi|312622201|ref|YP_004023814.1| hypothetical protein Calkro_1131 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202668|gb|ADQ45995.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 294

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 66/204 (32%), Gaps = 8/204 (3%)

Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +   L       G+   A+      L   P        +    + +    +A  +  +  
Sbjct: 1   MRGDLVLHYLESGNYKKAREVIQNILQEDPLNAEAYIQLSAIELESGNLKKAEDYAKEAL 60

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K         A+L          + D   +    +++LK+ +  +    C ++ LI    
Sbjct: 61  KIDSNNKVAWAVL----GQIYHHQKDYSQAERCYLQALKIDNVYVEVLACYSELLIETGF 116

Query: 276 KRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             K   IL+    + P  ++      + +L + N     K   +L   + +      ++ 
Sbjct: 117 IEKGLEILKYAKSLEPTNDLILENEFFVNLYNRNFEKANKTIKKLFTSSGKIGSVYKLLV 176

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
              +  G+  +A+  A LA +  P
Sbjct: 177 LYEVNRGNFKKAYNYAKLAWQEYP 200


>gi|289667598|ref|ZP_06488673.1| putative secreted protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 551

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 85/249 (34%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L  A+     
Sbjct: 302 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 361

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 362 ATADDDARRDAYVLEAELHQRANDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 417

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D++ +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 418 DDVLRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 477

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 478 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 533

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 534 RLDPDNRAL 542


>gi|213967226|ref|ZP_03395375.1| TPR domain protein [Pseudomonas syringae pv. tomato T1]
 gi|301381038|ref|ZP_07229456.1| TPR domain protein [Pseudomonas syringae pv. tomato Max13]
 gi|302060380|ref|ZP_07251921.1| TPR domain protein [Pseudomonas syringae pv. tomato K40]
 gi|302134870|ref|ZP_07260860.1| TPR domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928068|gb|EEB61614.1| TPR domain protein [Pseudomonas syringae pv. tomato T1]
          Length = 575

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 89/275 (32%), Gaps = 39/275 (14%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
             +F  + LV LL  ++A    +++IA +              +  + Y  +  +G   S
Sbjct: 45  YGSFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAVKTQDPGVSERA-YQIAEYMGADQS 103

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---------- 222
           A   A      +P       A   Q   A  +  ++ ++ +  +   + +          
Sbjct: 104 ALETALIWARNAPSDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAAE 163

Query: 223 --------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
                                    L+  ++L     GD   S    +E     +  I  
Sbjct: 164 TDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAP 222

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALRL 317
            +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   L
Sbjct: 223 ILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAAL 280

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   +  E    ++ + LE  + ++A       +
Sbjct: 281 LQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 315



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            K+      Q    ++ L + L   + L  + +  A   LE ++   A  + A  +L   
Sbjct: 273 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 331

Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                D  SA   YA   +   PD            V     + A   L++ +    ++ 
Sbjct: 332 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 389

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L +  +        +   +    ++LK   +        A     +N   + E  
Sbjct: 390 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 446

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338
           L  I K  P   +A         +   +   A  L E       +    L  +  +   +
Sbjct: 447 LRTIIKREPENAMALNALGYTLSDRTTRYTEARELIEKAHQISPDDPAVLDSLGWVNYRL 506

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           G++D A      A++  P  E+   L ++  A   +  +       AL   PD
Sbjct: 507 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 558


>gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 799

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 83/280 (29%), Gaps = 39/280 (13%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-QYNIAHEK 142
           G + L   +         +A +    VS + +  +          I+  E      A   
Sbjct: 115 GRELL---MKPAGKGEEVVAVEERKRVSAETSLSDS---------ISSIENSDSEQAEVW 162

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                               +    GD   A     KAL   PD  +             
Sbjct: 163 FN-------------RG--NQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRGVALADLG 207

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           ++  AI   ++  +   ++++        R +  AD G+   +  +  ++L++  +   A
Sbjct: 208 KYEEAIANYDKALQIQPDFHQ----AWYNRGVALADLGEYEEAIANYDKALQIQPDFHQA 263

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRL 317
                 +L    +  +A    +K  ++   P+    +                +    + 
Sbjct: 264 WYNRGVALADLGEYEEAIANYDKALQIQ--PDKHEAWYNRGVALGNLGKYEEAIANYDKA 321

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +I  +  ++  +      ++G  ++A A    A++  P 
Sbjct: 322 LQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPD 361


>gi|188991867|ref|YP_001903877.1| hypothetical protein xccb100_2472 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733627|emb|CAP51832.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas
           campestris pv. campestris]
          Length = 396

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 10/142 (7%)

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           + K +   + R R       +L++  +G    +Y    E  KL       +   A     
Sbjct: 149 RSKSDQIIFKRLR------EALQHIKEGSYDIAYEILEECQKLSPEYYEVARIFAFFHQK 202

Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESL 328
           +    +A    E    + P  P++   +   +    ++    +++     +++  S E  
Sbjct: 203 RGNYTEARENYELAIALAPDTPQLLFWFGKFIMTCEQDLDSAIQKFEAAHKLDSGSPEIS 262

Query: 329 VIVSKIALEMGSIDQAHAKAML 350
           V +++  +   S D+AH     
Sbjct: 263 VNLARAQMIQHSFDRAHQLLEQ 284


>gi|161525096|ref|YP_001580108.1| cellulose synthase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189350160|ref|YP_001945788.1| hypothetical protein BMULJ_01316 [Burkholderia multivorans ATCC
           17616]
 gi|160342525|gb|ABX15611.1| cellulose synthase operon C domain protein [Burkholderia
           multivorans ATCC 17616]
 gi|189334182|dbj|BAG43252.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 1313

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 19/195 (9%)

Query: 70  AMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126
           A L      R     D  Y A   GL ++A  ++  A  + +  ++      E +  L  
Sbjct: 289 AALDRQRDARRRLERDPDYIAQQRGLQALARGDLAAAEPLLTRAARGRADDAEAVGGLGL 348

Query: 127 VQIALAERQYNIAHEKLEM---MLQIPATREFAV------YSLYFESCRIGDLNSAQRYA 177
           ++  L E +++ A         +      +   +      + L  +         A +  
Sbjct: 349 LR--LREGRHDEARALFARAATLATDQRGKWQGLARTAQFWGLLAQGRDAASAGRAAQAE 406

Query: 178 TKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIAR 232
             A       P   +A +      +  ++W+ A   L +    ++ +         L A 
Sbjct: 407 RAARAALAMQPDSADAKLQLADALLAQRDWAGAEPLLRELLAARSPRIAAVRDTATLYAN 466

Query: 233 SLENADKGDMIASYH 247
           +      G ++ +  
Sbjct: 467 TGRAEQVGPLLEALQ 481


>gi|119897366|ref|YP_932579.1| tetratricopeptide repeat protein [Azoarcus sp. BH72]
 gi|119669779|emb|CAL93692.1| conserved hypothetical transferase protein [Azoarcus sp. BH72]
          Length = 391

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 66/191 (34%), Gaps = 15/191 (7%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    ++++         R  A+  L  +  + G L+ A+    K L  +     
Sbjct: 84  GETDRAIRLHQLLVDRDDLNEDQRLQALGELGQDFLKAGLLDRAETVFLK-LRDTRANDV 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHD 248
               +++ Y   K+W++AI        + +  W +  A      +               
Sbjct: 143 ALRYLLEIYQQEKDWAKAIEIARALPDHEEAMWRKEVASFHCELATTALADSRFPDVRRH 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305
             E+L +  + + AS+       +Q +   A     + WK     +   +Y  L +E   
Sbjct: 203 IDEALAINRSCVRASLIEGDLYAAQGRDEDAL----EAWKRIESQD--PVYLSLAAERVM 256

Query: 306 NTVGKLKRALR 316
           +  G+L R  +
Sbjct: 257 DAYGRLGRVEQ 267


>gi|302342025|ref|YP_003806554.1| hypothetical protein Deba_0588 [Desulfarculus baarsii DSM 2075]
 gi|301638638|gb|ADK83960.1| TPR repeat-containing protein [Desulfarculus baarsii DSM 2075]
          Length = 438

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 9/140 (6%)

Query: 262 ASICAAKSLISQNKKRKAE---VILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRA-L 315
           A     + L+   +  +A      + K W   P   +  A +Y  +       + K    
Sbjct: 15  ALAHEGQRLLRTGRANEAMDAFRAMVKGWPQQPEGYLGMAAVYQAMSLRLEAAREKAIGQ 74

Query: 316 RLEEI--NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
            L  +  + E + + + V++  ++    D A   A LA+++AP  +  L LA      ++
Sbjct: 75  GLTHLATHPEDLRARLEVAEALMDKEMFDWAAHHADLALRLAPEDQKVLRLAARAHRRNN 134

Query: 374 NTDKILYWTQSALHA-MPDP 392
           N  K +   + AL     DP
Sbjct: 135 NHRKAVVALRRALRQDPLDP 154


>gi|242006797|ref|XP_002424231.1| smile protein, putative [Pediculus humanus corporis]
 gi|212507600|gb|EEB11493.1| smile protein, putative [Pediculus humanus corporis]
          Length = 963

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 90/240 (37%), Gaps = 27/240 (11%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  PD   
Sbjct: 576 NRTKEAQEVYERALFYDNNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPDHEQ 631

Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  ++Q+    +    A   L +     K+    R    +   +   D  D+  + 
Sbjct: 632 ALLNSAILLQELGRVELRKIARDRLLKLL--NKDATNERVYFNLG--MLAMDDHDVSGAE 687

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299
           H    +++L D+   A    A  L   ++  +A   L +   V  HP+       + +IY
Sbjct: 688 HWFRLAVQLKDDFRSALFNLALLLADDHRPLEAAPFLNQ--LVRYHPDHVKGLILLGDIY 745

Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             ++   +      R  ++ ++  E+V+ L  +  + +E G++ +A      A+K+AP +
Sbjct: 746 INNIKDLDAAESCYR--KILKLEPENVQGLHNLCVVFVERGNLQKAEGCLKQALKLAPNE 803


>gi|195108155|ref|XP_001998658.1| GI24092 [Drosophila mojavensis]
 gi|193915252|gb|EDW14119.1| GI24092 [Drosophila mojavensis]
          Length = 498

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 63/202 (31%), Gaps = 12/202 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFAV 157
             L+  +  Y +      N YL       + LA  +   A +    +L++    T   + 
Sbjct: 58  GQLSDALTHYHAAVEGDPNNYLTLFKRGTVYLALGKTRFAIQDFSRVLELKPDFTAARSQ 117

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +     + GD + A +     L   P    V E   +     ++W      LN   + 
Sbjct: 118 RGIV--HMKSGDYDHALQDFELVLREEPQNSLVLEHYARVRPAKEQWELVQRLLNNNDEQ 175

Query: 218 AK--------EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                     E +        ARS       D +++  D  +  +L  +S       A+ 
Sbjct: 176 NAIGMITQLLEISPWSVTFRQARSDAYLKTNDPLSAIADLRQVNRLSQDSTEGHYNIAQL 235

Query: 270 LISQNKKRKAEVILEKIWKVNP 291
           L +      A   + +  K +P
Sbjct: 236 LYNIGHATNALKEIRECLKFDP 257


>gi|195117658|ref|XP_002003364.1| GI17875 [Drosophila mojavensis]
 gi|193913939|gb|EDW12806.1| GI17875 [Drosophila mojavensis]
          Length = 851

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 68/206 (33%), Gaps = 18/206 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R GD  + ++    A+ I+P  P     +         +  A   L     +       
Sbjct: 488 QRNGDWQNEEQLFRSAIAINP--PKALGNLGSVLSSQGRYEEAKLALQSALAHRPTM--- 542

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS--QNKKRKAEVI 282
            A       + +  + +  A+      +++L      A +  A +L++  Q ++ +A  +
Sbjct: 543 -ADAHFNLGIVHQQQQNYTAALLCYRRAIQLRPQLAPAYVNLATTLLAWDQGRQEEAAAV 601

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           L    ++  H           S +   +    L+L  +++    S + +  +   + ++ 
Sbjct: 602 LLAGARLPGH------GVRDRSAHEAARHSAYLQLSALHRSQGRSQLAMEVLNEALDTLP 655

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIE 368
                    +     + +  L  ++E
Sbjct: 656 LERRNQRAMLH----QRLAALHVELE 677


>gi|78188708|ref|YP_379046.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78170907|gb|ABB28003.1| TPR repeat [Chlorobium chlorochromatii CaD3]
          Length = 706

 Score = 41.1 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/242 (10%), Positives = 72/242 (29%), Gaps = 10/242 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             +    +   N A E    ++++      A  +L       GD + A+    +AL  +P
Sbjct: 21  HARQLRKQGMLNEAIEAFREVIELQPDYVAAYNNLANALQAQGDSDGAEAVYQQALHYAP 80

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             P +        +  +E+  AI    +      ++     +     +   + +G+  A+
Sbjct: 81  MLPVLHCNYGSLLLARQEYDAAIKSYQKALTLQADFF----LAYTNLAKAYSVRGNFFAA 136

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI----LEKIWKVNPHPEIANIYTH 301
                 +L+L        +   +         +A       L+       +  +      
Sbjct: 137 LQTYKAALRLKPQDAELYLDCGQLYQQYGFIPQAVKYYRRSLQLAASARGYNALGAALQD 196

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                 + +      L ++  +       ++++   +G ++ A       + +       
Sbjct: 197 -WGNLKLARASYHRAL-KLQPDFDLPQYNLAQLYENLGELETARRYYEQTLTVDAENAKL 254

Query: 362 LL 363
           LL
Sbjct: 255 LL 256


>gi|332968797|gb|EGK07845.1| tetratricopeptide TPR_2 protein [Psychrobacter sp. 1501(2011)]
          Length = 694

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 5/154 (3%)

Query: 218 AKEWNRNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            +E  ++ A  +  R+LE +   D    S   A++  +     I A    A   +  +  
Sbjct: 192 KQEALKDDATAVFERALELSLLYDMPKESLAFALQWQQQNPEHIPALFYVAHLALKAHDY 251

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             +  +L +I   +   +++ I   +   N   +      L  +  +     ++V +  L
Sbjct: 252 ELSGKVLTEILDYDTQADLSEILIGIYPTNQKDQRSLLETLLSL-PKHDNPSLLVMQAGL 310

Query: 337 --EMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQI 367
             ++G  D A      A+K  P    F++L A I
Sbjct: 311 MSQLGQPDIALVSVNRALKFQPDNAPFIVLKADI 344


>gi|328866185|gb|EGG14571.1| TPR repeat-containing protein [Dictyostelium fasciculatum]
          Length = 756

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 25/216 (11%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A+         +P     W+  A ++ Y    + S A   + Q      +      
Sbjct: 274 DIKKARLLFRSVTQTNPKHAPGWIASAKLEMYA--GKLSVARKIIAQGCLECPDDEEVW- 330

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                  +ENA+      +     +++K+  +SI   + AA +L    K +K   +L + 
Sbjct: 331 -------IENANLQTPDNAKLLLAQAVKVIPHSIKIWLYAA-ALEKDVKMKK--RVLRRA 380

Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            +  P+  ++      L   E+    L RA+     N +     + ++   LE    D+A
Sbjct: 381 LEFVPNSVKLWKEAVELEEPEDAKILLGRAVECVGDNVD-----LWLALANLES--YDRA 433

Query: 345 HAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKIL 379
                 A    P   EI++  AQ+E+A +H  +   
Sbjct: 434 REVLNKARTAIPTSIEIWIAAAQLEEAVNHTENVAR 469


>gi|313500589|gb|ADR61955.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 257

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 4/106 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
               +S         L  L   Q       +N A   LE   +I       +Y L     
Sbjct: 141 AAGGLSADEQLDGPVLALLTTAQTQQGSGDFNGAASSLERAQRIAPREPQVLYRLAQVRL 200

Query: 166 RIGDLNSAQRYATKALDIS---PDA-PWVTEAVVQQYVLAKEWSRA 207
             GD   A++ A +AL  +   P     +   + Q      + + A
Sbjct: 201 SQGDAAQAEQLARRALTYANGRPSLQAELWNTIAQAREKQGDSAGA 246


>gi|310767736|gb|ADP12686.1| tetratricopeptide repeat protein [Erwinia sp. Ejp617]
          Length = 389

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 25/248 (10%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184
            + + A    + +++        R  A+  L  +    G  + A+             +S
Sbjct: 83  GEVDRAIRIHQALMESDSLTYDQRLLAIQQLGRDYMAAGFYDRAEHMFGQLVDETDFRLS 142

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243
                  + ++  +    +W  AI    +  K  K       A      +L+     D+ 
Sbjct: 143 -----ALQQLLIIHQATSDWLNAIDAAERLIKLGKSRLGMEIAHFYCELALQAMSSDDLE 197

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297
            +     +      NS   SI   +  I++ +  KA    + ++E  K         + +
Sbjct: 198 RAMSLLKKGEAADRNSARVSIMMGRIHIAKAEYAKAVQHLQRVIEQDKELVSETLEMLES 257

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y HL        +    R  E N  +  + + ++ I  +    + A       ++  P 
Sbjct: 258 CYQHLEQGPAW--INYLERCVEENTGAA-AELYLAGILDQQDGAEAAQTYITRQLQRHPT 314

Query: 358 KEIF-LLL 364
             +F  L+
Sbjct: 315 MRVFHRLM 322


>gi|310822924|ref|YP_003955282.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395996|gb|ADO73455.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 271

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 14/199 (7%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  E    G L+ A +   KA+++ P +    + +   Y   K +  A+       K 
Sbjct: 17  RGI--ELADRGWLDEAIKEFKKAIELDPSSAHAHDNLATVYAEKKLFREALAEYLTALKL 74

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E       L    S   A+      +  +  E+++L      A +    +   Q +  
Sbjct: 75  EPESATAHYNLACFLSTHAAEM-----AVEEYKEAIELDPEYPDAHLNLGLTYADQGRVE 129

Query: 278 KAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A   L+   +       P  E+A     +   +    + +   +  + +++ E+ + + 
Sbjct: 130 EAMRELQTAIELDAQDAFPRHELAA--LQMDEGDYRSAITQLKEVVRLEQDNFEAHLDLG 187

Query: 333 KIALEMGSIDQAHAKAMLA 351
               + G   +A      A
Sbjct: 188 ICYAQKGFYAEAERAYEKA 206


>gi|300115107|ref|YP_003761682.1| tetratricopeptide repeat-containing protein [Nitrosococcus watsonii
           C-113]
 gi|299541044|gb|ADJ29361.1| Tetratricopeptide TPR_2 repeat protein [Nitrosococcus watsonii
           C-113]
          Length = 580

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 12/171 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLEM 145
           L  G + I A     A  M  Y     +  ++    LL  +   A    + +IA + L  
Sbjct: 403 LAEGEILINAGRYKEA--MSHYDKALQSRPDD--TNLLYARALVAENLGRLDIAEQDLRR 458

Query: 146 MLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           ++ +      A+ +L Y  + R G L  A RY ++A+ + P+  ++ +++   Y    ++
Sbjct: 459 VITLEPGNAEALNALGYTLADRTGRLEEALRYISRAMKLKPNNAFILDSMGWVYYRLGDY 518

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            +A  +L +  +  K+       +          KGD   +      +LK+
Sbjct: 519 DKAEKYLREAMELRKDPE-----IAAHLGEVLWAKGDKAGARQVWQHTLKM 564


>gi|189219505|ref|YP_001940146.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
 gi|189186363|gb|ACD83548.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
          Length = 246

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 60/164 (36%), Gaps = 27/164 (16%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
               +L    + ++  +    +++ +L      A + AA+  + + +  KAE  L K++K
Sbjct: 60  AYQDALVAFKRLNVDEAQKAILKAQELKPKDPRAIVLAARIFLQKKEYNKAEKELYKVFK 119

Query: 289 VNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVE------------SLVIV 331
           +   P+ +  Y +L       ++    L R  +    +  + E              V  
Sbjct: 120 IQ--PDYSPAYQYLGEVFYAKKDYKEALYRFEQAALHDSSNKEILLKRIYCMIGLGRVDS 177

Query: 332 SKIALE-MGSIDQ-------AHAKAMLAMKIAPRKEIFLLLAQI 367
           ++  +  + + D+       A A     +K    ++  L  A+I
Sbjct: 178 AESLIAGLSAFDESSPGYYFAKAALCRVLKKYNEEKSLLDTARI 221


>gi|156045017|ref|XP_001589064.1| hypothetical protein SS1G_09697 [Sclerotinia sclerotiorum 1980]
 gi|154694092|gb|EDN93830.1| hypothetical protein SS1G_09697 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 836

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D   A R   +A  ++P   +       ++V+ +E+ +A+T      ++A   +R     
Sbjct: 622 DHEQALRCFKRATQLNPKFAYAFTLQGHEHVMNEEYDKALT----SYRHAMAVDRRHYNA 677

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                      G+   ++     + K+   + +        +  +  K  A    +K  +
Sbjct: 678 YYGVGKVYEKMGNYDKAFIHFEAASKINPTNAVLLGLMGSVVDKKGNKALALAYFKKAIE 737

Query: 289 VNPHPEIAN------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           ++P   +        + T    E+ + +LK    L     +      ++ ++   +    
Sbjct: 738 LDPKSALTRFKKARCLMTMGNMEDALEELKILKDLA---PDEAMVHFLLGRLYKSIKQKG 794

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373
            +     +A+ + P+     +   IE     
Sbjct: 795 ASVRHFTIALNLDPKASQ-QIKEAIESLEQG 824


>gi|149179248|ref|ZP_01857813.1| TPR repeat protein [Planctomyces maris DSM 8797]
 gi|148841927|gb|EDL56325.1| TPR repeat protein [Planctomyces maris DSM 8797]
          Length = 609

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 46/160 (28%), Gaps = 10/160 (6%)

Query: 204 WSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           W      L    ++ +   R      I+         + G    +      S+++     
Sbjct: 433 WE--RKDLQASLRHFEASARLLPQNHIVYEKWGSLLREMGQTDEAVQKLQRSIEINPQYA 490

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRALR 316
            A     +   S+    KA  + E   +  P  + A  Y      L +      +    R
Sbjct: 491 PAYFTLGRIWESRGDLDKARELYEATLQHAPGFDSA-WYNLGLIDLKAGRQPEAIAAFQR 549

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             EIN     +   +  I L   +  QA      A+ I P
Sbjct: 550 ALEINPRHASAHNNLGVIYLFQQNFSQAKFHFEEALHIDP 589


>gi|115523116|ref|YP_780027.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53]
 gi|115517063|gb|ABJ05047.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
           BisA53]
          Length = 735

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 8/218 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G+LN A+    +A   +P    V  A+ +  +  + W  A    +Q +K     N +
Sbjct: 390 QRRGNLNHAEDILAEASSRNPTDTNVLSALARVRLARQNWIGAQEIADQIRKVGDNQNIS 449

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             IL    +     +     +      +     N+  + +   ++ ++  +  +AE  L 
Sbjct: 450 DNIL----AASLTGQKKYDEAIGLLQSAYSANPNATQSMLGLVRAYVAAKQTDRAEAFLR 505

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSI 341
            +   +P    A +   L+   +    K       + E N +       ++ +      +
Sbjct: 506 AVLNASPQNVQARVTLGLVQLASNAPAKAEATFKAVIEENAKDPAGYRALADLYGRQNKL 565

Query: 342 DQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378
           + A       ++ AP      L LA +++A       I
Sbjct: 566 NDALQILKAGLQQAPNDVALRLGLAGLQEATRDIDGAI 603


>gi|323941189|gb|EGB37374.1| tetratricopeptide [Escherichia coli E482]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|312074136|ref|XP_003139835.1| hypothetical protein LOAG_04250 [Loa loa]
 gi|307765001|gb|EFO24235.1| hypothetical protein LOAG_04250 [Loa loa]
          Length = 659

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 5/107 (4%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A      +  R G+  +A ++  KAL I              Y    +++ A T L+  
Sbjct: 259 VAKRG--VDKIREGENATAVQHFNKALSICEKNIEALVGRAAAYANMGQYNLAETDLDAA 316

Query: 215 KKNAKEWNRNRAIL---LIARSLENADKGDMIASYHDAIESLKLCDN 258
                     R  +   L+  +    + G    +     +SL + D+
Sbjct: 317 LAINASHTNARNYMIETLLQEAKRLEEAGKKDEAKTKYEKSLTIKDD 363


>gi|26390368|dbj|BAC25886.1| unnamed protein product [Mus musculus]
          Length = 607

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 459 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 514

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 515 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 567


>gi|78046533|ref|YP_362708.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034963|emb|CAJ22608.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 562

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  +    +LY    +   L  A+     
Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQVSEARLRTASALYELGRKPEALAEARALQGD 372

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 429 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 545 RLDPDNRAL 553


>gi|87125272|ref|ZP_01081118.1| probable tpr domain protein [Synechococcus sp. RS9917]
 gi|86167041|gb|EAQ68302.1| probable tpr domain protein [Synechococcus sp. RS9917]
          Length = 606

 Score = 41.1 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 74/257 (28%), Gaps = 21/257 (8%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           A  ++  A   L+  LQ+      A+ +L      +G   +A     +AL + PD     
Sbjct: 46  ASGRHQDAIASLQQALQLNPGNALALGNLGAAQQELGQTEAAIHSLQQALKLRPDFAIAL 105

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +        +   A+    +  +      R    +L          G   A+     +
Sbjct: 106 TNLGLCLQSRGDHEAAMACFARSLRLRPGNLR----VLQGLGWSQLQAGHPDAAIDTLQQ 161

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
            L    ++    +  A +     + + A+    +     PH   A +   L       + 
Sbjct: 162 VLAQAPHAAEIRLILASAQREARQIQAADQNFRRC-ATEPHASAAVVAASLEHFTVTRQA 220

Query: 312 KRALRLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
               +L +          + V  + +AL+      A A +      A             
Sbjct: 221 NALEQLLDSRGQGVSDPVAQVYAAALALQRQQFSNARAISDQLNSDAITA---------- 270

Query: 369 QANSHNTDKILYWTQSA 385
                 T +I +W+  A
Sbjct: 271 ---LPPTARIRHWSTRA 284



 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 2/158 (1%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           A+     A        Q +  +   L  L   Q      Q   A   L+  L++      
Sbjct: 46  ASGRHQDAIASLQQALQLNPGNALALGNLGAAQ--QELGQTEAAIHSLQQALKLRPDFAI 103

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+ +L       GD  +A     ++L + P    V + +    + A     AI  L Q  
Sbjct: 104 ALTNLGLCLQSRGDHEAAMACFARSLRLRPGNLRVLQGLGWSQLQAGHPDAAIDTLQQVL 163

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             A      R IL  A+      +         A E  
Sbjct: 164 AQAPHAAEIRLILASAQREARQIQAADQNFRRCATEPH 201


>gi|320588421|gb|EFX00890.1| and tpr domain containing protein [Grosmannia clavigera kw1407]
          Length = 539

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 61/198 (30%), Gaps = 11/198 (5%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           LA  + S +S Q    +  L  LL      L+  +   A       +    T   A +  
Sbjct: 10  LAAGIVSALSTQDIPTDTPLSSLLASAHGHLSRGETGEALVYYNAAIARDPTGYLAFFKR 69

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                 +G    A     K L + PD       + +      +W  A     + K     
Sbjct: 70  ATTYLSLGRPAQATDDFNKVLSLKPDFEAAHIQLGKIRQRVADWDGAREHFAKVKATPDM 129

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-------ICAAKSLISQ 273
              +RA+     + + A   ++  +  +  E +     +I  +          A+   ++
Sbjct: 130 QELSRAL---GEAEKAAGLAELAEAAGNWEECISQAGVAIPVANRALSLRQLRARCRFAR 186

Query: 274 NKKRKAEVILEKIWKVNP 291
            +  +    L  +  +NP
Sbjct: 187 GEVEEGAGDLLHVLNLNP 204


>gi|291301009|ref|YP_003512287.1| NB-ARC domain-containing protein [Stackebrandtia nassauensis DSM
           44728]
 gi|290570229|gb|ADD43194.1| NB-ARC domain protein [Stackebrandtia nassauensis DSM 44728]
          Length = 827

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 34/120 (28%), Gaps = 14/120 (11%)

Query: 91  GLMSIAAHNIPLARKMHSYVS----QQHTFHNEYLVYLLEVQIALAERQYNIA------- 139
           G  ++A  +   AR   +              E        ++A        A       
Sbjct: 696 GEAALAHDDADTARDAFTQAREIGSAIGDRAGEAHATFGLAEVARLNGDDREALALVADA 755

Query: 140 HEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
               + +   P T     +      +   GD ++A+ +  +AL ++        A ++  
Sbjct: 756 QPVFQDLDDDPCTVLALDLRGDM--AVAQGDRDAARAHWEEALVLATRHALPQTARLRAK 813



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 87/305 (28%), Gaps = 78/305 (25%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML------QIPATREFAVYSLY 161
           +          + L  L   +IA    Q   A +    +L              A+  L 
Sbjct: 520 AQAIGDRGAEADALSGL--AEIARLTGQPRRAEDLFRRVLVIRRQIADHDGEAHALRGLA 577

Query: 162 FESCRIGDLNSAQRYATKALDIS------PDAPWVTEAVVQQYVLAKEWS----RAITFL 211
            +     D  +A  Y  +ALD+       P        +++   + ++++     A + L
Sbjct: 578 -QVSAGRDFVAAADYYRQALDLHRRNGNGPGEAETLWGLLEIARIFEDYATVEANARSIL 636

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
              ++         A+  +  +   A  GD  A+      +L +C +             
Sbjct: 637 EICRRVGNRIGEAHALCGLGTA--FARTGDHEAATTSCRRALSICLDI------------ 682

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIA--------NIYTHLLSENTV--GKLKRALR----- 316
               +R A       W+      +A        + +T      +    +   A       
Sbjct: 683 --GNRRGAVR----AWRGLGEAALAHDDADTARDAFTQAREIGSAIGDRAGEAHATFGLA 736

Query: 317 -LEEINKESVESLVIVSKI-----------------------ALEMGSIDQAHAKAMLAM 352
            +  +N +  E+L +V+                         A+  G  D A A    A+
Sbjct: 737 EVARLNGDDREALALVADAQPVFQDLDDDPCTVLALDLRGDMAVAQGDRDAARAHWEEAL 796

Query: 353 KIAPR 357
            +A R
Sbjct: 797 VLATR 801


>gi|186686793|ref|YP_001869986.1| TPR repeat-containing serine/threonin protein kinase [Nostoc
           punctiforme PCC 73102]
 gi|186469145|gb|ACC84945.1| serine/threonine protein kinase with TPR repeats [Nostoc
           punctiforme PCC 73102]
          Length = 652

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + +Y++A ++ E+ ++      FAV +L     + GD  +A   A K L    +   +  
Sbjct: 510 QGEYDLAEKQYEIAIRSSDQAIFAVAALARLKNKKGDHTAAATLALKGL-QKTNNRELQA 568

Query: 193 AVVQ----QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           ++ +      ++  + + A  +L +  K   +  R  A  L+++  E+  + +   +Y D
Sbjct: 569 SLYKDLGWARLMENKLTEAERYLEKATK--LDSERTDAYCLLSQIEESLGQLNYARAYID 626

Query: 249 A 249
           A
Sbjct: 627 A 627


>gi|169615473|ref|XP_001801152.1| hypothetical protein SNOG_10894 [Phaeosphaeria nodorum SN15]
 gi|111060273|gb|EAT81393.1| hypothetical protein SNOG_10894 [Phaeosphaeria nodorum SN15]
          Length = 627

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 64/194 (32%), Gaps = 13/194 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQI 149
           G     A      + + +Y +    F   +L  L L +Q        ++A E L+    +
Sbjct: 371 GFAHTFAAEGEHDQAISAYSTAARLFQGTHLPQLFLGMQNLQL-NNLSLAREYLKAAHDL 429

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-------QQYVLAK 202
             T    +  L            A +Y  +AL+IS       +A+V            A+
Sbjct: 430 CETDPLLLNELGVVYYNEEQFLEASQYFRRALEISAQNEAEPDALVPTKINLAHALRRAE 489

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            +  A+    +  ++          +  A+ L   + G    +     E+L +     MA
Sbjct: 490 LFEDALITFEEVLRHGI----KDPSVFAAKGLVLMELGREWDAVIILHEALAVAPQDPMA 545

Query: 263 SICAAKSLISQNKK 276
           +    ++L + +  
Sbjct: 546 TDLLNRALDNSDDM 559


>gi|85090798|ref|XP_958590.1| hypothetical protein NCU09438 [Neurospora crassa OR74A]
 gi|28919964|gb|EAA29354.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1444

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 78/236 (33%), Gaps = 38/236 (16%)

Query: 134 RQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           +  + A+      L+      PA     +Y     +    D   A+R   KA+++SP   
Sbjct: 557 KDRSGAYALFLESLKNNLNYAPAYTILGIY----YADYAKDKKRARRCFQKAVELSPSEV 612

Query: 189 WVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI- 243
              E + + +    +W R    A   ++  K      ++ + I     +L  A+      
Sbjct: 613 ESAERLARSFADDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFAALGVAELNKQEF 672

Query: 244 -ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +      +L++  N   + +   ++  S  +   A   +    K+             
Sbjct: 673 HKAIVSFQSALRISPNDYHSWVGLGEAYHSSGRYIAATKAILNAQKLE------------ 720

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
             E++            +  E+  +  I++ I  E+G  D++       ++  P +
Sbjct: 721 --ESSE---------ANLTGETWFTKFILADIKRELGDFDESIELYQRVIQERPDE 765


>gi|307625903|gb|ADN70207.1| hypothetical protein UM146_03975 [Escherichia coli UM146]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|291402198|ref|XP_002717429.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1
           [Oryctolagus cuniculus]
          Length = 865

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187
              Y+ A      MLQ       A+    + +    + D+ +A        + + + PD 
Sbjct: 161 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 220

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245
           P V E   +        + A+  L +  +        R+R  L            D   +
Sbjct: 221 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 273

Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299
           + D  +SL+L  N    ++         +   ++A    ++  K     ++ +  +   Y
Sbjct: 274 HEDFQQSLELNRN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 332

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L +       +   +   +N+  V++L +   +    GS+ +A       +++ P  E
Sbjct: 333 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 390

Query: 360 IFLLL 364
           +   +
Sbjct: 391 VCQYM 395


>gi|268317521|ref|YP_003291240.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262335055|gb|ACY48852.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 521

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 106/364 (29%), Gaps = 65/364 (17%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           A+      ++   ++ Q H   ++ +V   + + A        A +  E +         
Sbjct: 88  ASGESSALQEAVRFIRQHH--PDDPVVLRWQARWAHQHGDLVTARQLYEQLRDRYGADTS 145

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
              +L+      GD  +A +     L    D P +       Y       +A   L +  
Sbjct: 146 LNRTLWPLQLATGDTLAALQTLEALLPFDADNPELWRTAGLLYFRRDAREKARWALERAL 205

Query: 216 KNAKEWNRNRAIL------------LIARSLENADKGDMI-ASYHDAI------------ 250
           + A E      +L            L+AR+    ++      +  +A             
Sbjct: 206 RLAPEDTAAARLLARLEPHPTTPAALLARARHLIEQQPEDPQARQEARTLLQDLLRRDST 265

Query: 251 --ESLKL-----------------------CDNSIMASICAAKSLISQNKKRKAEVILEK 285
             E+L+L                           +     AA++ ++    R+   + E+
Sbjct: 266 HVEALRLLARLYRDERPDWSAELLTRSLQYDPRDLSVWTTAARTWLAAGMPRRGAEVAEE 325

Query: 286 IWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRLEEINK--------ESVESLVIVSKI 334
              + P  P +     Y HL        L     L ++          E+ E   +   +
Sbjct: 326 ALFLFPDQPPLLRLAAYAHLSLGRPDAALPHVETLLKLLPEWPEHTPEEAAELHALQGHL 385

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ-ANSHNTDKILYWTQSALHAMPDPL 393
              +   D A      A ++  R     L   +         +  L   ++AL   P+P 
Sbjct: 386 LARLERPDAAREACRQARRLNTRAAAVRLHCAVVDWLAGGPQETALQEARAALPDPPEP- 444

Query: 394 WISD 397
           W+S+
Sbjct: 445 WMSE 448


>gi|260773184|ref|ZP_05882100.1| hypothetical protein VIB_001651 [Vibrio metschnikovii CIP 69.14]
 gi|260612323|gb|EEX37526.1| hypothetical protein VIB_001651 [Vibrio metschnikovii CIP 69.14]
          Length = 389

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 100/341 (29%), Gaps = 63/341 (18%)

Query: 98  HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +  +       + L      +  +     + A +  E ++  P  RE 
Sbjct: 83  GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVAGFLDRAEKIFEQLIDEPEHRES 142

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+                                  + +   Y   +EW +AI       
Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIECAQALV 168

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  ++  +N  A      ++     G    +      +L      + ASI   K  ++  
Sbjct: 169 KLGRKRMKNSIAHFWCELAMLEQSDGQDNKAMQFFKRALHEDPKCVRASISLGKLCLANQ 228

Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV--E 326
           + ++    LE++      +     P +A  Y HL  E+ +        L +    +    
Sbjct: 229 QYQQTISHLERVLSQDIDFIGEVLPTLAECYHHLGQEDAL-----VEFLRQCIDNNAGVS 283

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYWTQS 384
           + ++++++  +   +  A       +   P  + F  L+   I +A        L   Q 
Sbjct: 284 AELMLAQLVAQHDGVASAQELLTRQLVKNPTMKGFYRLIGYHIAEAEEGRAKASLSTLQK 343

Query: 385 ----ALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418
                L A   P +       S+    W    P  K     
Sbjct: 344 LVGEQLKAK--PHYRCRHCGFSTHSLYWH--CPSCKGWGTI 380


>gi|170076790|ref|YP_001733428.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002]
 gi|169884459|gb|ACA98172.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002]
          Length = 717

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 41/176 (23%), Gaps = 13/176 (7%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYF 162
            +                      +      Q + A    + ++Q  P   E  +  L  
Sbjct: 244 WQYADAAQAYPNAPRTPQNLYRLARSLQVSDQPDQARPAYQTLIQTFPDAPETGL-GLRR 302

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAK 219
            +  + D   A  Y  +A    P       A+               A     Q      
Sbjct: 303 LASLVNDTE-ALTYLDQAAQKFP--EEAPSALFAKADLLEKLGSNRSASQTREQALN--- 356

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                          + A++     +Y  AIE  K           AA+S+    K
Sbjct: 357 --THKDQSATTEYRWQQAERYAQEGNYTQAIEWAKAIATLTPDHTLAAESIFWTGK 410


>gi|115375784|ref|ZP_01463036.1| serine/threonine kinase associate protein KapB [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367172|gb|EAU66155.1| serine/threonine kinase associate protein KapB [Stigmatella
           aurantiaca DW4/3-1]
          Length = 281

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 14/199 (7%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  E    G L+ A +   KA+++ P +    + +   Y   K +  A+       K 
Sbjct: 27  RGI--ELADRGWLDEAIKEFKKAIELDPSSAHAHDNLATVYAEKKLFREALAEYLTALKL 84

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E       L    S   A+      +  +  E+++L      A +    +   Q +  
Sbjct: 85  EPESATAHYNLACFLSTHAAEM-----AVEEYKEAIELDPEYPDAHLNLGLTYADQGRVE 139

Query: 278 KAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A   L+   +       P  E+A     +   +    + +   +  + +++ E+ + + 
Sbjct: 140 EAMRELQTAIELDAQDAFPRHELAA--LQMDEGDYRSAITQLKEVVRLEQDNFEAHLDLG 197

Query: 333 KIALEMGSIDQAHAKAMLA 351
               + G   +A      A
Sbjct: 198 ICYAQKGFYAEAERAYEKA 216


>gi|300820780|ref|ZP_07100930.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7]
 gi|300526533|gb|EFK47602.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7]
          Length = 882

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 307 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 366

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 367 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 421


>gi|270158839|ref|ZP_06187496.1| TPR domain protein [Legionella longbeachae D-4968]
 gi|289166369|ref|YP_003456507.1| Protein with TPR motifs (protein-protein interaction motif)
           [Legionella longbeachae NSW150]
 gi|269990864|gb|EEZ97118.1| TPR domain protein [Legionella longbeachae D-4968]
 gi|288859542|emb|CBJ13507.1| putative Protein with TPR motifs (protein-protein interaction
           motif) [Legionella longbeachae NSW150]
          Length = 566

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 6/140 (4%)

Query: 125 LEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L  Q      E Q   A    E +L        +++ L     ++GD+++A  Y  +AL 
Sbjct: 6   LFAQAYKFQYEGQLPQAISIYEQILTKEPGHLNSLHFLGLIYAQLGDMDNAILYLLQALS 65

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ISP+   +   +   Y       +AI +  +  +   E+ + +  L    +++N    + 
Sbjct: 66  ISPNDVSLLNNLANAYKKTHLLDKAIEYYQRAIQLDPEYAQAQNNLATVYAMQN----NY 121

Query: 243 IASYHDAIESLKLCDNSIMA 262
             +     +++    +   A
Sbjct: 122 SKALFHYTKAVHAEPDFSAA 141


>gi|288933094|ref|YP_003437153.1| cellulose synthase operon C domain protein [Klebsiella variicola
           At-22]
 gi|288887823|gb|ADC56141.1| cellulose synthase operon C domain protein [Klebsiella variicola
           At-22]
          Length = 1350

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 42/367 (11%), Positives = 98/367 (26%), Gaps = 79/367 (21%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           + +   +R      +A   G  ++ + N   A++    V Q +    + L  +    IA 
Sbjct: 261 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 315

Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176
               Y  A + L                   +   Y    ++    + G+++ A      
Sbjct: 316 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 375

Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                 A  A         L  + D P   + +        + +     L    +   + 
Sbjct: 376 LAQQSGARGASAKLFRADVLRHNKDLPQAEQTLRSLLSDDPQNAAGRENLYYVLREQNKS 435

Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258
              +A+L                          ++      G+   +     E +    +
Sbjct: 436 AEAQAMLQTLPQSLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPGGAIATLREGVARYPD 495

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
                +  A+ L       +A  ++   ++  P      +Y   L  +  G  ++A  L 
Sbjct: 496 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNNALYAAALFASENGAWQQAQTLL 553

Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359
                  ++               +  ++  L  G+   A           P+      +
Sbjct: 554 ARIPGGSQTSDMRDLRQRVNYNLQLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGK 613

Query: 360 IFLLLAQ 366
           +  LLA+
Sbjct: 614 LARLLAE 620



 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 43/266 (16%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--A 180
            L   +  LA+     A   L  M   P         L       GDL +A        +
Sbjct: 577 QLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGKLARLLAESGDLTTAVSLVRNNIS 636

Query: 181 LDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSL 234
             +S +A    +  AV+ Q  L      A   L+  +  A       A +    +I  + 
Sbjct: 637 SGVSGNAGDYADQIAVLNQAGLTG---EAQNLLSNPQLQASSTPTQLASIRNGYVINEAD 693

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
              ++G+  A+Y   I +++    +       A+      K  K   +            
Sbjct: 694 RLREQGNYAAAYDKLIRAMQSDPQNTDLMFAMARLY-QSGKMNKEAGV------------ 740

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              +Y +L++ +T  +  RA  +                +AL  G+ D+A  +    ++ 
Sbjct: 741 ---VYDYLMTRDTPNQDARAGAI---------------DVALSAGNNDRA-EQLAGGLRQ 781

Query: 355 APRKEIFLLLAQIEQANSHNTDKILY 380
               +  LLLA++ +A  H+   + Y
Sbjct: 782 DNSPDRLLLLARVAEAQGHHQQAMTY 807


>gi|224543089|ref|ZP_03683628.1| hypothetical protein CATMIT_02289 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524029|gb|EEF93134.1| hypothetical protein CATMIT_02289 [Catenibacterium mitsuokai DSM
           15897]
          Length = 401

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 26/162 (16%)

Query: 211 LNQKKKNAK--EWNRNRAILLIARSLENADKGDMIASYHDAIESLK---LCDNSIMASIC 265
           L++  K  K  ++   +   LI  + +   KGD+  +   A E+++      +   A   
Sbjct: 76  LDKAYKEGKIKDYAEEKMKSLIEEAKQYYRKGDIKLATQCAEEAIEGKVNDPD---AYNV 132

Query: 266 AAKSLISQNKKRKAEVILEKI-----------WKVNPHPEIANIYTHLLSENTVGKLKRA 314
            A+         KA   ++             W       +        +++     KR 
Sbjct: 133 LARCYFDMQNYGKAVKTIDDGINIFNDAINLHW-------LGARMAITGTKDYEDAQKRI 185

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +L E+   S         + L  G  D A  +    ++  P
Sbjct: 186 NKLLELTPNSSIGHSEQINLHLNKGDEDLAFQEIDTYIEAHP 227


>gi|161485632|ref|YP_720352.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium
           erythraeum IMS101]
          Length = 541

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 14/108 (12%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216
             L        D  SA     +A+DI                  +++  AI   N+  K 
Sbjct: 424 RGLA--KYEQQDYQSALAEFDRAIDIDSSHIDAYIYRGDAKDKLEDYEGAIADYNEAIKI 481

Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              + K +     +L           GD   +  D  +++KL  N   
Sbjct: 482 DSSHPKAYYSRENVL--------RKAGDSREAIADYDQAIKLDPNYTP 521


>gi|153006319|ref|YP_001380644.1| hypothetical protein Anae109_3476 [Anaeromyxobacter sp. Fw109-5]
 gi|152029892|gb|ABS27660.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 634

 Score = 41.1 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 67/192 (34%), Gaps = 7/192 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD  +A+    KAL +         A+ Q    A  +  A + L +       ++  +  
Sbjct: 424 GDPGAAEAAYRKALALDAKYAAAWLALGQLQSAAGRFEEARSSLGRALVARPGYDAAQLS 483

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L +A +      G    +       L     ++ A    A  L + +++ +A   L +  
Sbjct: 484 LGVAAAR----AGRPDEAIAAYQALLARSPRNVSAWYDLALVLEAVSRRDEARAALARAL 539

Query: 288 KVNP--HPEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            ++P   P +      HL S       K    L ++    +E    +++I+   G+    
Sbjct: 540 AIDPGHAPSLRTVAQLHLDSGRLAEARKAFEELLDLVPGDLEGRAALAEISAREGNRAAC 599

Query: 345 HAKAMLAMKIAP 356
            A A   +  AP
Sbjct: 600 DAAARRLLAEAP 611


>gi|323703290|ref|ZP_08114941.1| Tetratricopeptide TPR_2 repeat protein [Desulfotomaculum
           nigrificans DSM 574]
 gi|323531755|gb|EGB21643.1| Tetratricopeptide TPR_2 repeat protein [Desulfotomaculum
           nigrificans DSM 574]
          Length = 192

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 5/132 (3%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              ++ +    +   LL    A      +   A    E +L +       + +L      
Sbjct: 59  KALEEQSKKKPHDTELLNALAANYTEAGKLGQAATTYEKILSLEPKNVSVMENLALIYYA 118

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNR 223
            G  + A+R   KAL I P+ P V     Q     K +  AI  + +     K     + 
Sbjct: 119 QGKTDVAERQLNKALQIEPNNPDVNFQYAQLQAEKKNYQGAIAAMEKVLQTEKQGPRADE 178

Query: 224 NRAILLIARSLE 235
            R ++   ++  
Sbjct: 179 ARKLIESWKAAA 190


>gi|331653983|ref|ZP_08354984.1| putative tetratricopeptide repeat protein [Escherichia coli M718]
 gi|331048832|gb|EGI20908.1| putative tetratricopeptide repeat protein [Escherichia coli M718]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 416

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESC---------RIGDLNSAQRYATKA--LD 182
                A   L+ M ++P         L  +           R G    A +   +     
Sbjct: 8   GDRRKALRALDGMKRLP-------RELLHQKSHCMVITACGRGGQWEQAVKLLREMPTAG 60

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +SP+      AV       ++W  A+  L +        +    ++  + +++   KG+ 
Sbjct: 61  LSPNVI-TYNAVFAACAKGEQWKGALALLKEMTAVGLTPD----VITYSSAVDACAKGEQ 115

Query: 243 ---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                +    + ++ L  + I  S  A  +     + ++A  +L++
Sbjct: 116 WKGALALLKEMTAVGLTPDVITYSS-AVDACAKGEQWKEALALLKE 160


>gi|213029668|ref|ZP_03344115.1| putative uroporphyrinogen III C-methyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 523

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 2/114 (1%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           ++ +   V I   N    TS   +  IL   +     +  + R      A        R 
Sbjct: 412 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 471

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
             +  K     L+ +A  +     K+ S  +         + YLL  + A    
Sbjct: 472 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRG 523


>gi|170691501|ref|ZP_02882666.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
 gi|170143706|gb|EDT11869.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
          Length = 613

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 109/321 (33%), Gaps = 30/321 (9%)

Query: 93  MSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146
           M+  A  I LA +  S         Q    +      L+  + +   + + A   LE  +
Sbjct: 119 MAQRATEIALAAQSPSDALAAAQLWQQYAPSSERAAQLDASLLVLSGKPDDAQPLLEREL 178

Query: 147 LQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
            ++P   R  A+ +L     R  +         + L    + P    AV +Q ++A +  
Sbjct: 179 AKVPADNRGNAILALQLLLSRGPNRIGGLHVLQEMLKNDMNRPEAQLAVARQQLVANDAP 238

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A   L Q      ++       L    +   ++ + IAS    ++      +   A + 
Sbjct: 239 GARKSLEQALALKPDY---LPAALTLSQMGPEERKEGIASLEKYVQQNPKSHD---ARLA 292

Query: 266 AAKSLISQNKKRKAEV---ILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEE 319
            A+  ++ ++   A+    I+ K    +  P +A     +      +    L +  +  E
Sbjct: 293 LAQMYLASDRLDDAQKQFEIMHKANANDLTPLMALALIRIQQKSFNDAQAYLTQYAQQAE 352

Query: 320 INKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN----SH 373
               +   ++ + +++++LE  +   A        KI+P  + + L AQI +A       
Sbjct: 353 KTPGADPGQAYIYLAQLSLEQKNEAAAADWLD---KISPSSQQY-LPAQITRAQLLAKQG 408

Query: 374 NTDKILYWTQSALHA-MPDPL 393
             D           A   D  
Sbjct: 409 KPDDARRQLARLRPADPRDQA 429



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 8/146 (5%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                +   A      +L      D +A+     +      +S  A+   A  L+   K 
Sbjct: 111 ARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQQ---YAPSSERAAQLDASLLVLSGKP 167

Query: 277 RKAEVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKES---VESLVIV 331
             A+ +LE+     P      A +   LL      ++     L+E+ K      E+ + V
Sbjct: 168 DDAQPLLERELAKVPADNRGNAILALQLLLSRGPNRIGGLHVLQEMLKNDMNRPEAQLAV 227

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           ++  L       A      A+ + P 
Sbjct: 228 ARQQLVANDAPGARKSLEQALALKPD 253



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 17/203 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMML-QIPATREFAVY---SLYFESCRIGDLNSAQRYATKAL 181
             Q+   + + + A  +L  +    P  +   V    ++ F++ R G+  +  + AT A 
Sbjct: 400 RAQLLAKQGKPDDARRQLARLRPADPRDQAVVVRTDAAILFDAKRYGEAETRLQEATAAF 459

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              PD            + A++ +     +  + +   +   +      A     AD+  
Sbjct: 460 PDDPDL------TYDYAMAAEK-NGHFDTMEAQLRKLIQTQPDNPQAYNALGYSLADRNQ 512

Query: 242 MIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN--- 297
            +A     +E +  L  N                    A  +L K + + P+ EI     
Sbjct: 513 RLAEADKLVEKASSLAPNDAFIMDSVGWVKYRMGDTTDAIKVLRKAYDIQPNAEIGAHLG 572

Query: 298 --IYTHLLSENTVGKLKRALRLE 318
             ++     +      + A +LE
Sbjct: 573 EVLWKSGNQDQARAAFREARKLE 595


>gi|119505824|ref|ZP_01627890.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
 gi|119458322|gb|EAW39431.1| TPR domain protein [marine gamma proteobacterium HTCC2080]
          Length = 605

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 99/277 (35%), Gaps = 18/277 (6%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMM-LQIPATREFAVYSLYF 162
            ++    +       L  LL+ +  L +R+ + A E L  + M LQ P        +L  
Sbjct: 64  ANAGSPAETPIPAASLYPLLQAEFLLRQRRLDEALEILTRQAMQLQDPE---LTRRALRL 120

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              R  D N A   + K  D   +        +   + A +  RA+ F    K+     N
Sbjct: 121 AEFRQNDRN-ALVLSMKLTDQDSNDGAAAVTAMGLLIRAGQPERALVFARTAKERGARIN 179

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEV 281
              A+++    L      D      +AIESL +        +I  A    +QN    A  
Sbjct: 180 -APALMVSWDKLG----ADRRRLTAEAIESLAVDWPEDQDIAIALAYLYRAQNNPEGALD 234

Query: 282 ILEKIWKVNPHPEIANI-YTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           IL+ +   +P  E A + +T +   +      KR     +   ++    +  +++     
Sbjct: 235 ILDPVLNESPDEERALLLWTQIKLDQGGKNPFKRMRAALKRAPDNEALRLQFARLLAGTE 294

Query: 340 SIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH 373
             D+A  +    + ++PR   +   L L +IE     
Sbjct: 295 QYDEAREQFAALLVLSPRNGDYLFSLALIEIEAKQLA 331


>gi|94268542|ref|ZP_01291208.1| TPR repeat [delta proteobacterium MLMS-1]
 gi|93451563|gb|EAT02372.1| TPR repeat [delta proteobacterium MLMS-1]
          Length = 538

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 5/101 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            L E + A     +  A    +  + + P +RE A+  L   +    D  +A     + L
Sbjct: 362 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAAM-GLATVAQSRNDPLTALHLYQQIL 420

Query: 182 DISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAK 219
           +  P      + +V        A         LN+  + A 
Sbjct: 421 ERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNRHPQAAP 461


>gi|91201109|emb|CAJ74168.1| hypothetical protein kuste3406 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 610

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 74/213 (34%), Gaps = 25/213 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKK 216
           +        D   A     +A+ + PDAP       AV+       ++ RAI   +   +
Sbjct: 38  ILIHKQNYQD---ALHEYERAISLKPDAPEAWYNKAAVLDYM---GDFERAIEAADMAVQ 91

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +  ++    A  +  R+ ++   G    +     ++L++  +++M               
Sbjct: 92  SKPDY--WEAWYMKGRASDH--TGKYYEAIKAFDKALEIKPDALMVLYNKGNVHDHIGDI 147

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL--KRALRLE------EINKESVESL 328
             +    + I K+   P+    + +      + ++  KR + LE       IN    E+ 
Sbjct: 148 EASVKTYDSILKLK--PDEYEAWNN--KGLALARIPEKRGIALEAYDQAIRINPVYYEAW 203

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +      + +    +A      A+KI P++   
Sbjct: 204 INKGNCFVRLRRYGEAIDAYDTAIKIRPKEHAA 236


>gi|329119615|ref|ZP_08248296.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464212|gb|EGF10516.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 624

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 89/267 (33%), Gaps = 10/267 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L   ++AL +     A      ML+     E A  ++   +  +G    A++     L I
Sbjct: 65  LFGAELALQKGDPGTALGTYIAMLERTRDPEVAERAI-DMAVGLGAYQYAEQVYQSWLKI 123

Query: 184 SPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR--SLENADKG 240
            P   P +      + ++   ++ A        + A E  R+R  LL+A+  +       
Sbjct: 124 EPAPGPALQRITWMRDMVRGNYANARDGFTAALEGADEAQRSRIFLLVAQIAAQNPEVAK 183

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
            M  + H    + +   +    ++ A   L + N K  A V   +         +   Y 
Sbjct: 184 IMEETVHRQAAAHQDKPD----AVIADAILSALNDKPSAAVAALQRLAALDSEILPPTYL 239

Query: 301 HLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            L    +     + R     + ++ S     +  +  +  G  D+A       +   P  
Sbjct: 240 TLRLIGQRKPDTINRFFAETDTDQLSPVWQELQIEALVYAGKKDEAGRLLQNLIDKRPSA 299

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSA 385
           ++++  A +        ++ + +   A
Sbjct: 300 DLYIQAALLAANRKAPLEETVGYLTKA 326


>gi|324507792|gb|ADY43297.1| Signal recognition particle 72 kDa protein [Ascaris suum]
          Length = 644

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 9/122 (7%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD + A + A K L   P      +  +   +   ++  A+  +       K    
Sbjct: 20  ADTSGDYDKALKTANKILRNFPRETLAFKCKLVAQIQLGQFEEALALI------KKTPFH 73

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                L  ++       D  A+     ++     + +      A+ L    K  +A  I 
Sbjct: 74  QMGDCLFEKAYVQYRLNDDTAAMETLAKAN---PDDVRCMELKAQLLYRAEKFDEAAAIF 130

Query: 284 EK 285
           +K
Sbjct: 131 KK 132


>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 923

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 78/268 (29%), Gaps = 45/268 (16%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A +   Y        +  L +L       A+  +  A       +++      A 
Sbjct: 633 GEFEKAIR--DYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAY 690

Query: 158 --YSL--------------YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVL 200
                              + ++  + D      YA +A  +      V +A+      L
Sbjct: 691 YNRGFAWTCLGQFARSIPDFTQAIAL-DPEDGSAYANRAFALH-SLGAVAQAIEDYTQAL 748

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA---------------DKGDMIAS 245
            +    A T+ N+   +    +   AI   A +L                    GD+  +
Sbjct: 749 QRLGRDASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAVNLAVCRQAVGDLERA 808

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
             D  E+++L  +     +   +  + +    +A        K+N  P++ +    L   
Sbjct: 809 LADLNEAIRLDPDEAEIYLIRGRLHLQRGDPTQAAADFAAALKLN--PDLPSA-LRLRGL 865

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSK 333
                 KR   L ++      S  ++++
Sbjct: 866 ALFKLGKRLTALLDL------SRSLLAR 887


>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 484

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 15/175 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALD----ISPDA 187
               + A + L+ M+++    E   Y L  E  C+ G  + A +   K ++    + P +
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQS 363

Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                P     +++      + S+A T + Q  K            L      ++ +G  
Sbjct: 364 TLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 419

Query: 243 IASYHDAIESLKLCDNSIMASICAA-KSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +++      L+   +S  ++  +  +S + +N+   A+  L+ + + +  P+ A
Sbjct: 420 DSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 474


>gi|242024304|ref|XP_002432568.1| General transcription factor 3C polypeptide, putative [Pediculus
           humanus corporis]
 gi|212518028|gb|EEB19830.1| General transcription factor 3C polypeptide, putative [Pediculus
           humanus corporis]
          Length = 827

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 7/129 (5%)

Query: 156 AVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           A+  L  ++      GD  SA +   + +   P AP   + + + Y       +++    
Sbjct: 103 ALEGLMGQANMCFVKGDHESALQMCLEIIRQVPSAPEPFQTLAEIYEEKGLKEKSLQVAM 162

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
               +    +  + I L  RSL+  +  D I  Y  AI   K    +I   I   + L  
Sbjct: 163 IA-AHLNPRDCEQWINLGERSLQLNNLSDAITCYSRAI---KYDPGNINPHIIRCQLLEQ 218

Query: 273 QNKKRKAEV 281
           +  ++ A  
Sbjct: 219 KGDRKSAIK 227


>gi|253772555|ref|YP_003035386.1| hypothetical protein ECBD_1135 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162523|ref|YP_003045631.1| hypothetical protein ECB_02441 [Escherichia coli B str. REL606]
 gi|300930195|ref|ZP_07145612.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|242378149|emb|CAQ32922.1| conserved protein [Escherichia coli BL21(DE3)]
 gi|253323599|gb|ACT28201.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974424|gb|ACT40095.1| hypothetical protein ECB_02441 [Escherichia coli B str. REL606]
 gi|253978591|gb|ACT44261.1| hypothetical protein ECD_02441 [Escherichia coli BL21(DE3)]
 gi|300461915|gb|EFK25408.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|309702881|emb|CBJ02212.1| putative TPR-domain protein [Escherichia coli ETEC H10407]
 gi|323936289|gb|EGB32580.1| tetratricopeptide [Escherichia coli E1520]
 gi|323961365|gb|EGB56977.1| tetratricopeptide [Escherichia coli H489]
 gi|323971037|gb|EGB66285.1| tetratricopeptide [Escherichia coli TA007]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|28868322|ref|NP_790941.1| TPR domain-containing protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28851559|gb|AAO54636.1| TPR domain protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 575

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 89/275 (32%), Gaps = 39/275 (14%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
             +F  + LV LL  ++A    +++IA +              +  + Y  +  +G   S
Sbjct: 45  YGSFSQDTLVSLLSAELAGQRNRFDIALDNYVTQAVKTQDPGVSERA-YQIAEYMGADQS 103

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---------- 222
           A   A      +P       A   Q   A  +  ++ ++ +  +   + +          
Sbjct: 104 ALETALIWARNAPSDLEAKRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAAE 163

Query: 223 --------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
                                    L+  ++L     GD   S    +E     +  I  
Sbjct: 164 TDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAP 222

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALRL 317
            +  A+ L S N+ ++A  +LEK  K   +P+   +   Y  +L E         +   L
Sbjct: 223 ILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAAL 280

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +   +  E    ++ + LE  + ++A       +
Sbjct: 281 VQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 315



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            K+      Q    ++ L + L   + L  + +  A   LE ++   A  + A  +L   
Sbjct: 273 AKVQFAALVQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 331

Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
                D  SA   YA   +   PD            V     + A   L++ +    ++ 
Sbjct: 332 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 389

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L +  +        +   +    ++LK   +        A     +N   + E  
Sbjct: 390 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 446

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338
           L  I K  P   +A         +   +   A  L E       +    L  +  +   +
Sbjct: 447 LRTIIKREPENAMALNALGYTLSDRTTRYTEARELIEKAHQISPDDPAVLDSLGWVNYRL 506

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           G++D A      A++  P  E+   L ++  A   +  +       AL   PD
Sbjct: 507 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 558


>gi|323967997|gb|EGB63409.1| tetratricopeptide [Escherichia coli M863]
 gi|327252257|gb|EGE63929.1| tetratricopeptide repeat family protein [Escherichia coli STEC_7v]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|306814387|ref|ZP_07448549.1| hypothetical protein ECNC101_20137 [Escherichia coli NC101]
 gi|305851781|gb|EFM52233.1| hypothetical protein ECNC101_20137 [Escherichia coli NC101]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|302877727|ref|YP_003846291.1| cellulose synthase operon C domain-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302580516|gb|ADL54527.1| cellulose synthase operon C domain protein [Gallionella
           capsiferriformans ES-2]
          Length = 1236

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 96/296 (32%), Gaps = 54/296 (18%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH----EKLEMMLQIPATREF 155
            P   K+ +  +     ++  ++   +   ALA+   + A     + ++     P     
Sbjct: 172 SPKVDKIDADEAAVRLANDPDIIARTDALDALADGNIDQAETSLLDIIKRRPNDPE--VI 229

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS---------- 205
               L  +    G+   +++Y  +A+  +            +   A  W           
Sbjct: 230 GGLGLVHQK--RGNFIESEKYFIQAVAAAQG----------EESEAGRWESLIGTARFSQ 277

Query: 206 ---RAITFLNQKKKNAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLK 254
               A   LN+ K    E    +AI         L  R     ++ +   +     E+LK
Sbjct: 278 YMTNAKALLNENKLPEAEAAIEQAIALKPGDPDTLAVRGNIKTEENNFPEAERLYREALK 337

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKI-------WKVNPH------PEIANIYTH 301
           +   +  A+   A  L+   +  +A   +E++       W+ +P+       E  N+Y  
Sbjct: 338 IEGYNSFATRGLANLLVRMGRSEEALSFIEQVLNDYPNEWRKSPYSQASLLREAGNLYIA 397

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +    +K   +   ++ ++      ++K  + +  I  A       + ++P 
Sbjct: 398 AHQPSYA--VKAFEQAVSVDPKNPWVRFSLAKHYISLDLIPLARGVIQEGVNLSPD 451


>gi|163787308|ref|ZP_02181755.1| TPR repeat [Flavobacteriales bacterium ALC-1]
 gi|159877196|gb|EDP71253.1| TPR repeat [Flavobacteriales bacterium ALC-1]
          Length = 686

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              +  A    + ++Q       A+         +     A  Y  KALD+SP  P    
Sbjct: 101 NNNFVDAKAYYKDLVQEDPKSFAALLGFANTLSNLKAYEDALTYVNKALDVSPGNPNAMT 160

Query: 193 AVVQQYV-------LAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIA 244
           +    Y+        A+ + +A   L +  +    + +    +  +    E  D+   + 
Sbjct: 161 SKKYIYLGYAYQNQQAQHYDKAEMLLTKNLELFGDDKDTLLNLANLYLIWEKYDEAQTMY 220

Query: 245 SYHDAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +        K    +         A       K++KA  I  + +  
Sbjct: 221 NRLAEQPQHKIIASNGL----ALVAHL---NGKEKKALAISTEAYNS 260


>gi|144900378|emb|CAM77242.1| TPR repeat [Magnetospirillum gryphiswaldense MSR-1]
          Length = 497

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 7/153 (4%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           +S   GD  SA+    + L I    P   + +    +       A   L Q         
Sbjct: 16  QSLERGDAASAEHQFRQGLMIRRGDPQALQGLGLALIRQGRQGDARQPLEQAAAALP--- 72

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A           + GD  A+      + ++      A     + L+   +  +AEV+
Sbjct: 73  -KDAGCAANLGALLIELGDHPAAEPHLRRATRVQPGMAAAWNNLGRVLMHLGRLDEAEVM 131

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
           L K   + P     +       E    +L R  
Sbjct: 132 LRKALTLRPA---YSQCRENWRETQDIRLHRLE 161


>gi|121703103|ref|XP_001269816.1| UDP-N-acetylglucosaminyltransferase [Aspergillus clavatus NRRL 1]
 gi|119397959|gb|EAW08390.1| UDP-N-acetylglucosaminyltransferase [Aspergillus clavatus NRRL 1]
          Length = 1669

 Score = 41.1 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 37/112 (33%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y+ A      ++   AT   A+ +L      +     A ++  +A+ + P      E 
Sbjct: 575 GDYHKAMRWYSRIIARDATHVEAISNLAATLLALERREDALQHWLRAVKLRPSFFEAVEH 634

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++  Y  +     A+  ++  + + +             + E     D  AS
Sbjct: 635 LIGLYCTSHRGKEAVRIIDYVQNSLRSPQNGDCFTADEHASETESDADSRAS 686


>gi|326916559|ref|XP_003204574.1| PREDICTED: WD repeat-containing protein 35-like [Meleagris
           gallopavo]
          Length = 1267

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 41/138 (29%), Gaps = 12/138 (8%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQR 175
            +  L  LL  + AL +     A +           +       L  ES +  ++ +   
Sbjct: 783 PHPRLWRLL-AEAALQKLDLQTAEQAFVRCKDYQGIKFVKRLGNLQSESMQQAEVAAYFS 841

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  +        +  +   +   +W R +  L     ++ +    +A   I     
Sbjct: 842 RFEEAERM-YLDMDRRDLAIGLRIKLGDWFRVLQLLKTGSGDSDDALLEQAHNAI----- 895

Query: 236 NADKGDMIASYHDAIESL 253
               GD  A     + ++
Sbjct: 896 ----GDYFADRQKWLNAV 909


>gi|301024832|ref|ZP_07188469.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
 gi|300396363|gb|EFJ79901.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|125597406|gb|EAZ37186.1| hypothetical protein OsJ_21527 [Oryza sativa Japonica Group]
          Length = 674

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 87/281 (30%), Gaps = 29/281 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--IAHEKLE-MMLQIPATRE 154
             +  AR+++          +E+   L        ER      A    +  + ++P  + 
Sbjct: 240 GEVERARRVYERA-ADLLADDEHAEVLFVAFAEFEERCREVERARAVYKYALDRVPKGQA 298

Query: 155 FAVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
             +Y  +    +  GD            +      +  +P         ++         
Sbjct: 299 EELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKD 358

Query: 206 RAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD-- 257
           R      +   N       R       L I  +L E  D  DM  +     E LKL    
Sbjct: 359 RIREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELDAKDMERTREVYSECLKLIPHK 418

Query: 258 --NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                   + AA+  I Q   + A  IL     + P  +I   Y  +  E  +G  +R  
Sbjct: 419 KLTFSKMWLMAAQFEIRQKNLKAARRILGNAIGMAPKGKIFKKYIEI--ELYLGNFERCR 476

Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            L     E +  +  + +  +++   +G  D+A +   LA+
Sbjct: 477 TLYEKYIEWSPANCYAWMKYAELEKSLGETDRARSIYELAI 517


>gi|124024305|ref|YP_001018612.1| glycosyl transferase [Prochlorococcus marinus str. MIT 9303]
 gi|123964591|gb|ABM79347.1| Glycosyl transferase, family 2:TPR repeat [Prochlorococcus marinus
           str. MIT 9303]
          Length = 427

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 174 QRYATKA-LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAI 227
            R A +A L   P  P+    +    V   +  R I  L Q  K     NA    R   +
Sbjct: 210 LRTAMEAWLAEHPGDPYTCAKLGALEVDEGQKERGIQLLRQGLKQNENTNANPIERYELL 269

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDN---SIMASICAAKSLISQNKKRKAEVILE 284
           L +  +L    + D   +     E++ L  +   S+ A +  A  L+ Q    +A  +  
Sbjct: 270 LHLGIAL---AQDDPQGAVTAYREAVALPMDIRVSLGARLNLAALLMQQELLDEAIALTT 326

Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                   PE+A  + +L        N V  L    + +++N E  E+    +   L  G
Sbjct: 327 TA--TQQAPEVALAWYNLGLMQRRRGNLVEALYAYEQAKQLNPEHAETHQNHAVAMLVAG 384

Query: 340 SIDQAHAKAMLAMKIAPRK 358
            I+ A      A+ +  R+
Sbjct: 385 DINGARNSFSKAITLLQRQ 403


>gi|67526011|ref|XP_661067.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4]
 gi|40743817|gb|EAA63003.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4]
 gi|259485544|tpe|CBF82655.1| TPA: DnaJ and TPR domain protein (AFU_orthologue; AFUA_3G05400)
           [Aspergillus nidulans FGSC A4]
          Length = 519

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 7/180 (3%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173
            N  +  L+   +  L+      A   L+  +    T    V           +G    A
Sbjct: 29  PNTPMSSLIASAKAHLSSGSPRDALLYLDAAISRDPTNYLTVFQRG--AAYLSLGRRAQA 86

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNR-NRAILLIA 231
           Q    + L + P+         +  V   +WS A+  L +  KKN  E+     A     
Sbjct: 87  QDDFDRVLQLKPNFEGALLQRARLRVNTADWSGALNDLEKAGKKNTPEYEEFQNARDATI 146

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           R+L+   KG   A   +A  ++     S+      A     + +  +    L    +++P
Sbjct: 147 RALDAEKKGAWEACVSEATTAIAKASASLTLRRSRAHCRFEKGELEEGISDLTHTLQISP 206


>gi|302038642|ref|YP_003798964.1| putative type IV pilus biogenesis/stability protein PilW
           [Candidatus Nitrospira defluvii]
 gi|300606706|emb|CBK43039.1| putative Type IV pilus biogenesis/stability protein PilW
           [Candidatus Nitrospira defluvii]
          Length = 233

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 7/161 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A        A+   +  ++  P  +E   Y L       G    A+    +A+ I  D  
Sbjct: 54  ARLSSDQQQAYVSFQKAVKLNPDNKEA-HYGLGHIYSSQGRFKLAEESFREAIRIDGDYA 112

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                + Q       W  AI    Q   N      + A   + ++L +  +GD+  +   
Sbjct: 113 EANTYLGQVLANQDRWKEAIAAYRQALSNPLYPTPDLARFHLGKALMH--EGDLQGAMEV 170

Query: 249 AIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKI 286
             ++  +   ++  ++     A+         +A   L K+
Sbjct: 171 LEDATTVTPPNVPPAMLQLELARVYHKLGFDVRAREALAKV 211


>gi|297706453|ref|XP_002830052.1| PREDICTED: crooked neck-like protein 1-like isoform 1 [Pongo
           abelii]
          Length = 848

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 660 RAIYELAI 667


>gi|221045550|dbj|BAH14452.1| unnamed protein product [Homo sapiens]
          Length = 438

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    +  A ++  
Sbjct: 123 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 178

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 179 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 238

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+
Sbjct: 239 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 298

Query: 287 WKVN 290
           ++  
Sbjct: 299 YQTE 302


>gi|323449134|gb|EGB05025.1| hypothetical protein AURANDRAFT_54921 [Aureococcus anophagefferens]
          Length = 1310

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 47/255 (18%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKAL-----DISP 185
               Y  A E      +   T   A+Y  +Y +       ++ Q+    A      D SP
Sbjct: 303 MLGDYAGAMEMYREAGRSDETNLAALYGTIYCQVMTGELEDAEQQLEFIAAISDSIDQSP 362

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             P+                  +  L   +++         + L+ ++ +   +G    S
Sbjct: 363 QLPY------------------LKALIAWRRSGDASEH---VQLLEQAEKLHFRGLTDRS 401

Query: 246 YHDAIESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                 +   L  + +   I  AK  +   + +               P  A        
Sbjct: 402 VSSIFNNFYGLDPDFL---IQLAKEYLQHLRFQD--------------PSSARAQLGSSP 444

Query: 305 ENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFL 362
              V + ++   R+       +E+ ++V+   L +G ++ A     LA+ +        L
Sbjct: 445 AGAVNRGIEILERVSAQAPGLIEAHLLVAHARLAVGQLEAATRTLNLALSLDSQSAAAHL 504

Query: 363 LLAQIEQANSHNTDK 377
           L+A++  A  ++   
Sbjct: 505 LMARLALAQDNHRGA 519


>gi|312110462|ref|YP_003988778.1| hypothetical protein GY4MC1_1366 [Geobacillus sp. Y4.1MC1]
 gi|311215563|gb|ADP74167.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 420

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 71/238 (29%), Gaps = 46/238 (19%)

Query: 124 LLEVQIALAER----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L+   +   +           +  E M   P  +      L      +G  + +  +  K
Sbjct: 106 LIAADLYQMQGLEEVSERKLQQAYEKMPDEPIIQFA----LAELYFSMGQYSKSIPFYEK 161

Query: 180 ALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            L            E + +   L  E+ +A+ + ++  +   +        L    +   
Sbjct: 162 VLKKEKTIAGTHIPERLAEALSLCGEFEQALPYYDEALQEKLDSQ-----TLFGYGVTAF 216

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
                  +     E   L    +   +  AK+   + +       LEK +      EIA 
Sbjct: 217 QAEYYQTAIEKLSELKALDPEFVPLYLYLAKAYEHEGQ-------LEKSY------EIAK 263

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
              H+                     + E L+   K+AL++G  D+A +    A++I 
Sbjct: 264 EGIHVDE------------------WNKELLLYAGKVALKLGKPDEAESWLKKAIEID 303


>gi|297706455|ref|XP_002830053.1| PREDICTED: crooked neck-like protein 1-like isoform 2 [Pongo
           abelii]
          Length = 836

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 648 RAIYELAI 655


>gi|117624771|ref|YP_853684.1| hypothetical protein APECO1_3982 [Escherichia coli APEC O1]
 gi|218559469|ref|YP_002392382.1| hypothetical protein ECS88_2719 [Escherichia coli S88]
 gi|115513895|gb|ABJ01970.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218366238|emb|CAR03985.1| conserved hypothetical protein [Escherichia coli S88]
 gi|315288023|gb|EFU47425.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3]
 gi|323949203|gb|EGB45094.1| tetratricopeptide [Escherichia coli H252]
 gi|323955784|gb|EGB51542.1| tetratricopeptide [Escherichia coli H263]
          Length = 1093

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|221219056|ref|NP_001138238.1| dnaJ homolog subfamily C member 7 isoform 2 [Homo sapiens]
 gi|332260849|ref|XP_003279493.1| PREDICTED: dnaJ homolog subfamily C member 7 [Nomascus leucogenys]
 gi|31416724|gb|AAH03601.1| DNAJC7 protein [Homo sapiens]
 gi|119581192|gb|EAW60788.1| DnaJ (Hsp40) homolog, subfamily C, member 7, isoform CRA_a [Homo
           sapiens]
 gi|194385152|dbj|BAG60982.1| unnamed protein product [Homo sapiens]
          Length = 438

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    +  A ++  
Sbjct: 123 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 178

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 179 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 238

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+
Sbjct: 239 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 298

Query: 287 WKVN 290
           ++  
Sbjct: 299 YQTE 302


>gi|50949465|emb|CAH10656.1| hypothetical protein [Homo sapiens]
          Length = 728

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 361 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 420

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 421 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 480

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 481 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 539

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 540 RAIYELAI 547


>gi|324008454|gb|EGB77673.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|323978421|gb|EGB73506.1| tetratricopeptide [Escherichia coli TW10509]
          Length = 1017

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|297521558|ref|ZP_06939944.1| cellulose synthase subunit BcsC [Escherichia coli OP50]
          Length = 411

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%)

Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           R+       +     +     + L     A   R Y  A    + +L        A+  L
Sbjct: 125 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 184

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218
                  GD  +A+    K       +      V        + + A    N+   +  +
Sbjct: 185 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 244

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +   A++L   +   A  GD   +     +++
Sbjct: 245 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 279


>gi|294666027|ref|ZP_06731289.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292604219|gb|EFF47608.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 562

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L  A+     
Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 372

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 429 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 545 RLDPDNRAL 553


>gi|229111868|ref|ZP_04241414.1| TPR domain protein [Bacillus cereus Rock1-15]
 gi|229146966|ref|ZP_04275330.1| TPR domain protein [Bacillus cereus BDRD-ST24]
 gi|228636565|gb|EEK93031.1| TPR domain protein [Bacillus cereus BDRD-ST24]
 gi|228671624|gb|EEL26922.1| TPR domain protein [Bacillus cereus Rock1-15]
          Length = 222

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 14  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 74  AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208


>gi|254475750|ref|ZP_05089136.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
           putative [Ruegeria sp. R11]
 gi|214029993|gb|EEB70828.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
           putative [Ruegeria sp. R11]
          Length = 730

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 12/172 (6%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+         A E     A    A       +     +     ++L L    + A   
Sbjct: 105 NALDEAATCLNKACELQPTSATTFAAMGDVYKRQNRGQDALALYKKALSLDPACLPALNN 164

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKL----KRALRLEEI 320
              +L+ Q+K  +A+    K   +   P+ A + Y     +  +G +    K   +    
Sbjct: 165 MGNTLLEQDKIIEADECFAKA--IEQAPDNAQLLYNRANIQRQLGNVDVACKLYEQAARY 222

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQI 367
               +E+   ++++A + G   +A       +   P     R     L+A++
Sbjct: 223 APNFLEARYNLAQMAGQAGRQAEAIHHLEQILVARPADDRARARKLRLMAEL 274


>gi|220933709|ref|YP_002512608.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995019|gb|ACL71621.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 574

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/224 (9%), Positives = 61/224 (27%), Gaps = 62/224 (27%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +       +A R + + ++++P +    + +    V A     A+  L+   +N+ +   
Sbjct: 94  ALFADQREAALRASMRWVELAPASVEGRQVLGALLVNAGRVPEAVEQLDWVIQNSPQGQA 153

Query: 224 N-------------------------------RAILLIARSLENADKGDMIASYHDAIES 252
                                            A + +A++           +   A  +
Sbjct: 154 AGHTTVSNLLSRSQNQAAALAAMGQLAERYPGDASMQLAQARLALQMRQPEQALEAADRA 213

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           L L      A +  A++        +   I+ +                           
Sbjct: 214 LTLDPGLSDAKVLRARAYTQMGDLGRGVQIMREA-------------------------- 247

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                   + ++ +  +   ++ ++ G  D+A A+    +   P
Sbjct: 248 -----VASDPQNTDLRLAYGRLLIQAGDYDEARAEFEQLIARRP 286



 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 79/241 (32%), Gaps = 19/241 (7%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +IA  ER+ + A      +      R+  V  L     R G +++A     +    + +
Sbjct: 330 GRIAETERRSDDALRHYRGVGDGDHFRDARVR-LALLMGRAGQVDAALDMLREMRRDADE 388

Query: 187 APWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             W     +   Q    A+E+  A+  L+Q      +       LL AR+L       + 
Sbjct: 389 PDWRVRLYLTESQVLRDAREYQAAMEVLDQGLLEQPDSGE----LLYARALVAEKLDRLD 444

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLI---SQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               D    L    ++  A+   A         ++  +A   + +      HPE A I  
Sbjct: 445 ILETDLRAILARDPDN--AAALNALGYTLADRTDRLDEAYDYIRRA--HAQHPEDAAILD 500

Query: 301 HL-LSENTVGKLKRALRLEEINKE---SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            L      +G+L  A        +     E    ++ +  + G  D+A      A+   P
Sbjct: 501 SLGWVLYRMGRLDEAETYLRQAYDTMYDPEIASNLAMLLWDRGQRDEARRVLEDALAQDP 560

Query: 357 R 357
            
Sbjct: 561 D 561


>gi|194437693|ref|ZP_03069789.1| tetratricopeptide repeat protein [Escherichia coli 101-1]
 gi|194423499|gb|EDX39490.1| tetratricopeptide repeat protein [Escherichia coli 101-1]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 607


>gi|170029427|ref|XP_001842594.1| o-linked N-acetyl glucosamine transferase [Culex quinquefasciatus]
 gi|167862425|gb|EDS25808.1| o-linked N-acetyl glucosamine transferase [Culex quinquefasciatus]
          Length = 840

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 56/164 (34%), Gaps = 22/164 (13%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A+  +  AH     ML   ++R                 + A+++  +AL ++P   
Sbjct: 683 ALEAQPDHIAAHLSYGSMLARNSSR----------------TSEAEQWFRRALRLAPADA 726

Query: 189 WVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            V     +     +  + AI + +N  +    +++    +   A +L   D+   + +  
Sbjct: 727 SVHHHYAEFLTTVRRTAEAIQYRVNAAELAPSDYS---LVTAAASALRLLDRK--VEAER 781

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              +++ L      A       L    + ++A     +  ++ P
Sbjct: 782 WYRQAVNLRPEEARAHTNLGAILHLLGRPQEAAHSYREALRIQP 825


>gi|113952955|ref|YP_731753.1| TPR repeat-containing glycosyl transferase [Synechococcus sp.
           CC9311]
 gi|113880306|gb|ABI45264.1| Glycosyl transferase, family 2:TPR repeat [Synechococcus sp.
           CC9311]
          Length = 402

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 61/186 (32%), Gaps = 14/186 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIAR 232
            + L+  P  P+    +    V   +    I  L +   N  E       R   +L +  
Sbjct: 190 QEWLEQEPGHPYACAKLGALEVADGDRIHGIALLREGLANLGEGDENAAERYELLLHLGI 249

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP 291
           +L   D    I  Y  A+ +  L     + +     +L+ Q NK  +A  +     +   
Sbjct: 250 ALSTEDTNQAIEFYKQAL-AQSLDVRLGLGARLNLAALLLQTNKIDEAIQLTTTACQRA- 307

Query: 292 HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            PE+A  + +L             L+   R   +     E    ++   L  G ID A A
Sbjct: 308 -PEVALAWYNLGLMQRRKGEIKDALQSYERAISLEPSHAECHQNLAVARLVGGDIDGARA 366

Query: 347 KAMLAM 352
               A+
Sbjct: 367 SFREAI 372


>gi|157128485|ref|XP_001661450.1| Anaphase Promoting Complex, putative [Aedes aegypti]
 gi|108872562|gb|EAT36787.1| Anaphase Promoting Complex, putative [Aedes aegypti]
          Length = 577

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 3/121 (2%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            ++     A  +   A   +P    V + +V  Y+       A     +  K   E  R 
Sbjct: 347 LQLKKYQEAIAHLRFAQQFAPYRYEVHKVLVDTYLNMNRLREAQAQALKALKTIGETPRL 406

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +L      +++ K      +  A+E  +   N + A    A      N       +L+
Sbjct: 407 LVLLGRTYLKDDSTKAKAKTLFMKALEMNE---NYLPAVYMLADLYRQDNDASSCIKLLK 463

Query: 285 K 285
           K
Sbjct: 464 K 464


>gi|90019827|ref|YP_525654.1| hypothetical protein Sde_0178 [Saccharophagus degradans 2-40]
 gi|89949427|gb|ABD79442.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
          Length = 880

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 94/311 (30%), Gaps = 45/311 (14%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL++    NI LA +         +        L +  IA  ++ + +A +     +  
Sbjct: 488 QGLVASIDKNIDLANESFKKALSIDSKSYTA--NLYQALIAANQQNWKLATQGFTNAIAS 545

Query: 150 PATREFAVYSLYF---------------ESC--RIGDLNSAQRYATKALDISPDAPWVTE 192
              +      L                 E+   + GD  +A   AT  L           
Sbjct: 546 NPIQLAPYGGLLKSLAATESPNDVVTRFEALTGKNGDKTNAALIATDYLIQQNKTAEAQN 605

Query: 193 --AVVQQYVLAKEWSRA--------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
               +    L ++ S+A        I  +    ++A   N  +A +      +     + 
Sbjct: 606 KFETINLAELKEQRSQASAVAEEIYINLIKLHVRDAANANDQKAAVAYLEQAQAQYPNNT 665

Query: 243 IA---------SYHDAIESLKLCDNS------IMASICAAKSLISQNKKRKAEVILEKIW 287
                       Y    E+  L          + +++ +A  LI QN   +A   L+  W
Sbjct: 666 KLLSLAAAYYLQYDKLAEAAALASKLRQLNENVYSTLISADILIKQNDYAQAISSLKSEW 725

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHA 346
           K  P+ +IA         +     +  L+  E+     V+     +  A + G I  A  
Sbjct: 726 KREPNQDIALAIQKAALASNTDLDEDFLQSWEVAFPNQVQPHFYRANKAQQSGDIVLALK 785

Query: 347 KAMLAMKIAPR 357
                ++I P 
Sbjct: 786 HYEKIIEINPS 796



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 73/260 (28%), Gaps = 38/260 (14%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREF 155
                A    + ++  +    E    +      L       A + L  + Q      R  
Sbjct: 255 GRYADAAPYSNALANANPNWQETQDRMANAIANLQSGDLEAAEKILMQIQQDNPNQGRSA 314

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A+  +     + GD   A  Y    +D    AP  T A     +   +   A+  L    
Sbjct: 315 ALLGIIN--LQKGDSEKASEYFADNIDPETAAPIFTGAAALAQLQQNQIDSALQMLETAL 372

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +   +  R   +  +A +         I +   A  + +   +  M +   A    +  +
Sbjct: 373 EANPDNKRLLVLYGLAATRTQDLYQKGIEALQQA--ASQGEPDYRMHTTL-ADGYFNGKE 429

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             KA   LEK                                + I  +++     ++K  
Sbjct: 430 IAKATAELEKA-------------------------------QAIAPDNIALRYHIAKRY 458

Query: 336 LEMGSIDQAHAKAMLAMKIA 355
           L  G ID A A A   +K  
Sbjct: 459 LANGLIDNAKAFAQAQLKKD 478


>gi|291042672|ref|NP_001166973.1| transmembrane and tetratricopeptide repeat containing 4 [Danio
           rerio]
 gi|169154660|emb|CAQ13663.1| novel protein similar to vertebrate transmembrane and
           tetratricopeptide repeat containing 4 (TMTC4) [Danio
           rerio]
          Length = 739

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 6/103 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            +++W    +                A +        AD+G+  A+     E+++L    
Sbjct: 458 RSQQWRSEQSLFTSALSVCP----LNAKVHYNVGKNLADRGNQSAAVQYYREAVRLHPKY 513

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           + A       L  +N+ ++AE +L     V+  P+ A  + +L
Sbjct: 514 VHAMNNLGNILKERNELKEAEELLSAA--VHIQPDFAAAWMNL 554


>gi|320162285|ref|YP_004175510.1| O-antigen polymerase family protein [Anaerolinea thermophila UNI-1]
 gi|319996139|dbj|BAJ64910.1| O-antigen polymerase family protein [Anaerolinea thermophila UNI-1]
          Length = 770

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 86/305 (28%), Gaps = 46/305 (15%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREF--AVYSLYFES---CRIGDL---NSAQRYA 177
           +   A  +  +  A E  + +L+         A   L  E+      GD      ++ + 
Sbjct: 462 QASRAYEQGDFIAAAETYQEVLRRSPQDILYRAQAGLA-EAWAWQASGDARWLERSREHL 520

Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
              +   P  APW   A+   YV      +A   L + +  A    RN     +      
Sbjct: 521 ENVVAQEPAPAPW-HAALAGVYVAEGNLEQAWQALQEARARA----RNEPSYALYAGWIA 575

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
              G    +     E L+L        I A      +   R+     E    + P P   
Sbjct: 576 EQLGWQEQALTAYREGLRLDP------ILAGSPFWEETALRRQAR--EGTAFIQPQPYWQ 627

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              + L + +     +R        ++      +  ++AL  G  D A   A        
Sbjct: 628 EALSALEAGDISEARRRIAFSRFAGEKGFAPQAVEWRVALAAGEEDWALRAAK------- 680

Query: 357 RKEIFLLLAQIEQANSHNTDK-ILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415
                 L   +E+  S      +  +   A+    D         +   +L L P    L
Sbjct: 681 -----TLRDGLERYFSGWRGYNLAGYLNRAVF-PAD---------VPPNFLALFPQDGRL 725

Query: 416 CYFEW 420
               W
Sbjct: 726 DALAW 730


>gi|312372036|gb|EFR20087.1| hypothetical protein AND_20684 [Anopheles darlingi]
          Length = 915

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 18/180 (10%)

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAILLIARSLENADK 239
           I P A   ++A +++++       A   L+    +   A E + +  +    R       
Sbjct: 449 ILPGAESASQAEIERHLEMGRDFLARGQLSDALTHYHAAVEGDPSNYLTYFKRGTVYFAL 508

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANI 298
           G    +  D    L+L  +   A    A   +       AE  L  + + +PH P+    
Sbjct: 509 GKAKFAVSDFSRVLELKPDFTAARAQRASVFLKMGDFDNAETDLMVVLRHDPHNPDANQQ 568

Query: 299 YTHL--------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           Y+ +                 +    +    +L E    SVE     +++ L +G    A
Sbjct: 569 YSRIGPARDQWYLCVDVMERGDYTTAIALLTQLLEYCPWSVEIREARAQMYLRIGDRMAA 628


>gi|302851112|ref|XP_002957081.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f.
           nagariensis]
 gi|300257637|gb|EFJ41883.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f.
           nagariensis]
          Length = 572

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 55/185 (29%), Gaps = 8/185 (4%)

Query: 126 EVQIALAER-QYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKAL 181
           +     +     + A       L +      A++   +L  +         A R  + A+
Sbjct: 39  QASALHSSGTDLHRAEALYRRFLAVQPRHAHALHQLGALLTQLYGKEKDAEALRLVSSAV 98

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P +     ++   +  A  W  A     +      E +     +++  +    ++G 
Sbjct: 99  QLQPASAKFRNSLGVVHRTAGRWREAADAFERA----NEKDPLNVAVMMNLARALREEGR 154

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +        KL  +   A       L S      A     +  +++P  + A  +  
Sbjct: 155 QQRAAEVYGAVTKLQPDHPSAHYRRGAILRSIRHNEAALAAFRQHLRLHPEHQAAKFWVA 214

Query: 302 LLSEN 306
            ++ +
Sbjct: 215 AITGD 219


>gi|261333092|emb|CBH16087.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 776

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 12/142 (8%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIES 252
                W  A+  L        +  +      + A++++A +    ++GD+ A+     + 
Sbjct: 376 SKGGAWEEALQCLTAAAGIRIDGEKDAVLAQHHAVVVMAYARLVEERGDVAAARSALAKC 435

Query: 253 LKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           ++       A      I AA       +  +A+ +L     ++P PE+ +    L S   
Sbjct: 436 IRHFP-FKTACCPRLWIEAAALEERHGEFVQAQKLLAASLNISPCPEVFDAALRLESNAC 494

Query: 308 VGKLKRALRLEEINKESVESLV 329
                 A    + ++   ES +
Sbjct: 495 AAGEVSAESCVQRSRAIYESAI 516


>gi|224367223|ref|YP_002601386.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family
           protein) [Desulfobacterium autotrophicum HRM2]
 gi|223689939|gb|ACN13222.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family
           protein) [Desulfobacterium autotrophicum HRM2]
          Length = 450

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 11/200 (5%)

Query: 99  NIPLARKMHSYVSQQH-----TFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPA 151
           N   A +       Q               LL    A  L + + + A    E   ++  
Sbjct: 31  NAASAHRQGRLAEAQKGYEKVLEQRPDWGQLLNALGAVYLDQSRPDRAKAMFERAARLNP 90

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A Y+L        D + A       LD  PD   V   +   Y    +   AI+  
Sbjct: 91  PHLSACYNLGRMKQLENDHSGAITIYRAMLDAQPDMGEVWNNIGVAYREIGKPDEAISSF 150

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +            A   +  + +     +   +     +++++  +   A +    SL 
Sbjct: 151 RKAV--GFAPEMAEAWNNLGVAQDELHLTE--KASDSYGKAIEIQPDYASAHLNLGISLQ 206

Query: 272 SQNKKRKAEVILEKIWKVNP 291
           +  + ++A     K+ ++ P
Sbjct: 207 NSGQLKEAGKHYSKVLEIQP 226


>gi|158521641|ref|YP_001529511.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3]
 gi|158510467|gb|ABW67434.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3]
          Length = 474

 Score = 40.7 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 42/151 (27%), Gaps = 7/151 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL       A      +++       A Y L     +      A  +  K  + SP  P 
Sbjct: 274 ALCPGDS-AAIRHFTALVEQNPADPSARYGLGLALLQNNRPADAIAHLEKVAEKSPFHPH 332

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMIASYHD 248
               + + +     + +A++ L +       +N  R     A + E        I  Y  
Sbjct: 333 ALTDLGKAHYFTGAYEKALSILER-VPPTDFYNTER-YFYTAMAAEKLGLHDKSITLYKR 390

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            I+        + A     K    Q     A
Sbjct: 391 IIQQ---EPRYLPALYELGKVAGEQGNLDDA 418


>gi|328866496|gb|EGG14880.1| anaphase promoting complex subunit 3 [Dictyostelium fasciculatum]
          Length = 1033

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 53/194 (27%), Gaps = 18/194 (9%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            +   A K+     Q            L     L+    + A       L+I A    A Y
Sbjct: 819  DHESALKIFKRAIQLDNSFTYAYT--LCGHEYLSNDDLDNAQNYYRSALKIDARHYNAWY 876

Query: 159  SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ------QYVLAKEWSRAITFLN 212
             L     R+   + A+ +  KAL I+P       +V+            K    A++ L 
Sbjct: 877  GLGLIYFRLEKYDLAEYHFRKALTINP-----FSSVLYCHIGITLQANRKH-LEALSMLQ 930

Query: 213  QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            Q      +      +    ++      G    +  +  +  +L        I   K    
Sbjct: 931  QAI----DLQPRNTLAKFKKASILYQLGQYQEALTELDQFKELAPKETPLYILMGKIYKK 986

Query: 273  QNKKRKAEVILEKI 286
              +   A   L   
Sbjct: 987  LGQLDMALNCLTTA 1000


>gi|326800753|ref|YP_004318572.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
           sp. 21]
 gi|326551517|gb|ADZ79902.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
           sp. 21]
          Length = 395

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 18/229 (7%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A    ++ +       + ++ L     A   +QY+ A  K + ++   +       +L  
Sbjct: 155 ASAYTAFNNGLKYMPGDSILTLYAGIAAQNNQQYDDAISKFKTLIPKSSDAYL---NLSD 211

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              + GD  SA +Y  +A    PD+  +    +   +      + I  +  +   A + +
Sbjct: 212 AYLKKGDTASAVKYIDEAATKFPDSAKIINQKIVLNITTGNSEKVIKDIESQM--AADPS 269

Query: 223 RNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                  +  + E+  + D  + +Y   IE+      +  A+  AA  L        A  
Sbjct: 270 NGELPFFLGYAYESTKQPDKALEAYKKGIEAKPDDARNYGAA--AAIILNKARDIYNAAS 327

Query: 282 IL----EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
            +    E  +K      +   YT  L++  V  L++A  L+   K   E
Sbjct: 328 SIPTNKEAEYKAK----LQEAYT--LADTAVPYLEKATTLDPKTKGYWE 370


>gi|254411807|ref|ZP_05025583.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196181529|gb|EDX76517.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 639

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 64/194 (32%), Gaps = 7/194 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G   SA    T+A+ ++P             +   +   A     Q  +    +     
Sbjct: 394 QGKTQSALADLTQAIQLNPQNADAYYQRGNLRLELGDRQGAKADYTQVLQRDPNFTP--- 450

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              + R    AD G   A+ +D  ++++L  N + A +   +S  +   ++ A       
Sbjct: 451 -AWVNRGQIQADLGHEQAAINDYTQAIQLKPNLVTAYLKRCRSRSNLGNQKGAIDDCTTA 509

Query: 287 WKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
             + P+  +A            ++ G +       ++N E+ ++         E+     
Sbjct: 510 INLRPNQALAYQNRGLARQRRGDSRGAITDYTVAIQLNPEAADAYYNRGVARQEIEDTLG 569

Query: 344 AHAKAMLAMKIAPR 357
           A A    A++  P 
Sbjct: 570 AIADYTQAIERNPD 583



 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 51/186 (27%), Gaps = 21/186 (11%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +A  Y ++A+   P          + Y    +   A+  L Q  +         A   
Sbjct: 363 PEAAIDYYSQAITYQPQNATAYYYRGKIYANQGKTQSALADLTQAIQLNP----QNADAY 418

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             R     + GD   +  D  + L+   N   A +   +       ++ A     +  ++
Sbjct: 419 YQRGNLRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYTQAIQL 478

Query: 290 NPHPEIANIYT-HLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P +   Y     S + +G  K A         +              AL   +   A
Sbjct: 479 K--PNLVTAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQ----------ALAYQNRGLA 526

Query: 345 HAKAML 350
             +   
Sbjct: 527 RQRRGD 532


>gi|94498614|ref|ZP_01305167.1| TPR repeat-containing protein [Sphingomonas sp. SKA58]
 gi|94421909|gb|EAT06957.1| TPR repeat-containing protein [Sphingomonas sp. SKA58]
          Length = 675

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 57/179 (31%), Gaps = 5/179 (2%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                    +L+   +  A  Q   A    E    I   R+ A+  L       G+   A
Sbjct: 453 RANPGAPAAWLILGDLLQANGQGQAAVRAYEAGANIRFDRDAALR-LVSALQATGNGARA 511

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           ++ A   L   P    +        V  ++W  A   L   +    +   N A+L+   +
Sbjct: 512 EQVAQLFLRQHPMDRDMLRVAAGYAVGREDWRGAERLLQALRAQIGD---NDALLMTDLA 568

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291
             + ++    A+   A     L   +   +      L+  + K   A  +LEK   + P
Sbjct: 569 RVSLEQRKESAALAYARHGYALMPGNPATADMLGWVLLRTDAKGPAAVDLLEKAVALAP 627


>gi|300795419|ref|NP_001178666.1| tetratricopeptide repeat protein 21B [Rattus norvegicus]
 gi|109470008|ref|XP_001056795.1| PREDICTED: tetratricopeptide repeat domain 21B-like [Rattus
           norvegicus]
          Length = 1315

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 100/320 (31%), Gaps = 66/320 (20%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA------------- 139
           +++A  +   A  M              L  +   Q    E +  +A             
Sbjct: 662 LALAQGDTERALSM--------------LRNVTTEQPYFIEAKEKMADIYLKHRKEKMLY 707

Query: 140 HEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
                 + +  P+ R F +         I +   A     +AL+ +P    +   + +  
Sbjct: 708 ITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQALNQNPKDGTLARKIGKAL 765

Query: 199 VLAKEWSRAITFLNQKKKNAKE----------------WNRNRAILLIARSLENADK--G 240
           V    +S+AIT+     K+ ++                + +   +L  + + +  ++   
Sbjct: 766 VKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKAEKVLQHSLAHDPVNELSA 825

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HP 293
            M+      + +             AA     + + R    IL+++    P       H 
Sbjct: 826 LMVDGRSQVLLAKVYSKMERPGDAIAALQQARELQAR----ILKRVQMEQPDAVPSQRHF 881

Query: 294 EIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKA 348
             A I   +   +   +  ++A+          E+    ++ ++++ L    +D +    
Sbjct: 882 A-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLELAQLYLAQEDLDASLRHC 940

Query: 349 MLAMKIAPR-KEIFLLLAQI 367
            L ++     +   +L+A +
Sbjct: 941 ALLLQRDQDNEPATMLMADL 960


>gi|300867781|ref|ZP_07112424.1| putative MCP methyltransferase, CheR-type with Tpr repeats
           [Oscillatoria sp. PCC 6506]
 gi|300334198|emb|CBN57596.1| putative MCP methyltransferase, CheR-type with Tpr repeats
           [Oscillatoria sp. PCC 6506]
          Length = 578

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 53/153 (34%), Gaps = 8/153 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPW 189
           E       +    +      +   + +L  E+    +      A + A + +D+ P    
Sbjct: 389 ENNTVNTRQISSSLTVEKERQRAGI-NLLQEAEAFCKNKTYFEAIKKAEQVIDLYPHNFK 447

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               + + Y    ++ +AI + +Q  +     +          +    + GD+ A+ +  
Sbjct: 448 AYYLLAEIYANLGKYEQAINYCHQAIQ----VDSLSVFPYHLLAHIAEENGDVEAAKNLL 503

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            + + LC + I A +        +   ++A+ +
Sbjct: 504 KKIIYLCPSFISAYLDLGNIYAGEGNVKRAKKM 536


>gi|302664426|ref|XP_003023843.1| hypothetical protein TRV_02040 [Trichophyton verrucosum HKI 0517]
 gi|291187861|gb|EFE43225.1| hypothetical protein TRV_02040 [Trichophyton verrucosum HKI 0517]
          Length = 571

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV----VQQYVLAKEWSRAITF 210
             +  L     R  DL ++Q   T+    SP  P V+ A+    +   +   ++  A++ 
Sbjct: 54  AGMPGLLTNHNR-DDLRASQHLLTQLEGASPPDPEVSTALNLLKIDLLMRQGDYDDALST 112

Query: 211 LNQKKK--NAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLC 256
           ++Q  +  +   ++    I LLIA++      G     +  A+ + K+ 
Sbjct: 113 VDQVAQSMHQDSFDIATQISLLIAKARIFDRTGQPERGFSLAMRAAKIA 161


>gi|114158711|ref|NP_001041069.1| tetratricopeptide repeat protein 21B [Mus musculus]
 gi|123792576|sp|Q0HA38|TT21B_MOUSE RecName: Full=Tetratricopeptide repeat protein 21B; Short=TPR
           repeat protein 21B; AltName: Full=Tetratricopeptide
           repeat-containing hedgehog modulator 1
 gi|67764064|gb|AAY79164.1| tetratricopeptide repeat-containing hedgehog modulator 1 [Mus
           musculus]
 gi|123233021|emb|CAM21880.1| tetratricopeptide repeat domain 21B [Mus musculus]
 gi|123857418|emb|CAM17348.1| tetratricopeptide repeat domain 21B [Mus musculus]
          Length = 1315

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 46/338 (13%), Positives = 104/338 (30%), Gaps = 75/338 (22%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIA--------------HEK 142
                A K+      + +   E L V +    +ALA+   + A               E 
Sbjct: 630 GEQHEAAKVLQDAIHEFSGTCEELRVTIANADLALAQGDTDRALSMLRNVTTEQPYFIEA 689

Query: 143 LEMMLQI----------------------PATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            E M  I                      P+ R F +         I +   A     +A
Sbjct: 690 KEKMADIYLKHRKEKMLYITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQA 747

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----------------WNRN 224
           L+ +P    +   + +  V    +S+AIT+     K+ ++                + + 
Sbjct: 748 LNQNPKDGTLARKIGKALVKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKA 807

Query: 225 RAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +L  + + E   +    M+      + +         +   AA     + + R    I
Sbjct: 808 EKVLQHSLAHEPVSELSALMVDGRSQVLLAKVYSKMERPSDAIAALQQARELQAR----I 863

Query: 283 LEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVI 330
           L+++    P       H   A I   +   +   +  ++A+          E+    ++ 
Sbjct: 864 LKRVQMEQPDAVPSQKHFA-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLE 922

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
           ++++ L    +D +     L ++     +   +L+A +
Sbjct: 923 LAQLYLAQEDLDASLRHCALLLQRDQDNEPATMLMADL 960


>gi|30022471|ref|NP_834102.1| TPR repeat-containing protein [Bacillus cereus ATCC 14579]
 gi|218233420|ref|YP_002369205.1| TPR domain protein [Bacillus cereus B4264]
 gi|228954680|ref|ZP_04116703.1| TPR domain protein [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229071904|ref|ZP_04205115.1| TPR domain protein [Bacillus cereus F65185]
 gi|229081660|ref|ZP_04214155.1| TPR domain protein [Bacillus cereus Rock4-2]
 gi|229129676|ref|ZP_04258644.1| TPR domain protein [Bacillus cereus BDRD-Cer4]
 gi|229152599|ref|ZP_04280788.1| TPR domain protein [Bacillus cereus m1550]
 gi|229192607|ref|ZP_04319568.1| TPR domain protein [Bacillus cereus ATCC 10876]
 gi|296504888|ref|YP_003666588.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171]
 gi|29898029|gb|AAP11303.1| Tetratricopeptide repeat family protein [Bacillus cereus ATCC
           14579]
 gi|218161377|gb|ACK61369.1| tetratricopeptide repeat protein [Bacillus cereus B4264]
 gi|228590914|gb|EEK48772.1| TPR domain protein [Bacillus cereus ATCC 10876]
 gi|228630860|gb|EEK87500.1| TPR domain protein [Bacillus cereus m1550]
 gi|228653793|gb|EEL09663.1| TPR domain protein [Bacillus cereus BDRD-Cer4]
 gi|228701664|gb|EEL54155.1| TPR domain protein [Bacillus cereus Rock4-2]
 gi|228711200|gb|EEL63164.1| TPR domain protein [Bacillus cereus F65185]
 gi|228805007|gb|EEM51603.1| TPR domain protein [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|296325940|gb|ADH08868.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171]
          Length = 219

 Score = 40.7 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|329897173|ref|ZP_08271913.1| hypothetical protein IMCC3088_2584 [gamma proteobacterium IMCC3088]
 gi|328921328|gb|EGG28722.1| hypothetical protein IMCC3088_2584 [gamma proteobacterium IMCC3088]
          Length = 567

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 88/280 (31%), Gaps = 15/280 (5%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
           + Q+    +E +   L  + AL +  Y  A    + +       E +  +    +  +GD
Sbjct: 34  IRQEAPIPDELVYDFLLAEFALRQGDYRQALRLYQDLATQVDDVEVSARA-TRIAQFLGD 92

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            ++      + L   P+ P          +     ++A  +     +     +    +L 
Sbjct: 93  ESAVSVLVKRWLAQEPNNPEAGRLAGILALRRGAGAKAFDYFYDAAQEGAIVD--FGMLA 150

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            A    ++ + +++    DA        +   A    A          +A   + ++   
Sbjct: 151 RAYPDLSSPEREILKQRIDAKLDGSQERSLTFARALMA---AEDGDNTRALTFVNELLAA 207

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            P         A +   L  E+ +  L +A    + N  +       +++ L    +  A
Sbjct: 208 EPQNIQALMLQARLQLSLKHESPLDGLAQA---VKTNPNNEALRQHYAQL-LAGTDVSAA 263

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
             +  +     PRK  +L+   +     +++     + + 
Sbjct: 264 RTQYEILSADHPRKGEYLMALALLNKELNDSLAAKAYLRQ 303


>gi|326478361|gb|EGE02371.1| DnaJ domain-containing protein [Trichophyton equinum CBS 127.97]
          Length = 771

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199
           Q P          Y +    GD + A ++  +AL + PD+  + + +             
Sbjct: 471 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 526

Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                A+++  AI    +  +         + LL  R+  + +  +   +  D   +L+ 
Sbjct: 527 NAAFKARKYREAIDLYTKGLEVDPNNKDINSKLLQNRAQAHININEYDKAIRDCTSALEC 586

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             N I A    AK+        +A   L+ I + NP
Sbjct: 587 DPNYIKARRVRAKANGGAGNWDEALKELKDIAENNP 622


>gi|319956570|ref|YP_004167833.1| tetratricopeptide tpr_1 repeat-containing protein [Nitratifractor
           salsuginis DSM 16511]
 gi|319418974|gb|ADV46084.1| Tetratricopeptide TPR_1 repeat-containing protein [Nitratifractor
           salsuginis DSM 16511]
          Length = 211

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 12/153 (7%)

Query: 76  LHKRNYDKGY--KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
             +     G   + L     S+   +   A+K           + E L  L    + +  
Sbjct: 54  FSRSTEKPGRIEELLSIADESLEKGDNLEAKKALQSALILDENNPEILRRL--GVVYMNM 111

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPW 189
             Y+ A +  E +L++    + A  SL     ++G+  +A R   +AL +    +P    
Sbjct: 112 NDYSDARKTYEKLLELDPNDDLAHGSLANALHKLGEEEAALREHHEALRLDPDYAPHHYN 171

Query: 190 VTEAVVQQYVLAK---EWSRAITFLNQKKKNAK 219
               +       +   E+ +A+  L+   K AK
Sbjct: 172 YANTLYDLGRREEALAEYRKALE-LDSDLKEAK 203



 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 5/146 (3%)

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +      + P  R   + S+  ES   GD   A++    AL +  + P +   +   Y+ 
Sbjct: 52  KTFSRSTEKPG-RIEELLSIADESLEKGDNLEAKKALQSALILDENNPEILRRLGVVYMN 110

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             ++S A     +      E + N  +   + +      G+  A+  +  E+L+L  +  
Sbjct: 111 MNDYSDARKTYEKLL----ELDPNDDLAHGSLANALHKLGEEEAALREHHEALRLDPDYA 166

Query: 261 MASICAAKSLISQNKKRKAEVILEKI 286
                 A +L    ++ +A     K 
Sbjct: 167 PHHYNYANTLYDLGRREEALAEYRKA 192


>gi|307128870|ref|YP_003880886.1| cellulose synthase operon protein C [Dickeya dadantii 3937]
 gi|306526399|gb|ADM96329.1| Cellulose synthase operon protein C precursor [Dickeya dadantii
           3937]
          Length = 1298

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 77/246 (31%), Gaps = 15/246 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL     + A      +LQ       A+  + + + R GD  +A  Y  +A     +  
Sbjct: 276 TALNSGDLSNAQTAFSQVLQANPEDADALAGMGYAAQRRGDFAAAASYLERAARQGGENS 335

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A  QQ      +   +    Q  KN          L ++  L  A     + +   
Sbjct: 336 ----AQRQQQADDARFYAQLANAQQAMKNGDTAQ----ALTLSEPLAQAGGDKGLTAKLF 387

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             + L+  +N   A       L +    R A+  L  + +     + AN     L EN V
Sbjct: 388 RADVLRRTNNFPQAERLYRDVLQTDADNRNAKEGLYYVLREQNRADEANTLFAALPEN-V 446

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367
            +      +        E     +K AL  G   +A       ++  P      L LA+I
Sbjct: 447 RRSMAPRPVATSAPVRNE-----AKQALAAGDTVRAIGLLQQGIQRFPNDGWLKLDLARI 501

Query: 368 EQANSH 373
            Q   +
Sbjct: 502 YQQQGN 507



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 14/188 (7%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIA---HEKLEMMLQIPATREFAVYSLYFESC 165
                +    E L Y+L  Q    E     A         M   P      V +   ++ 
Sbjct: 410 QTDADNRNAKEGLYYVLREQNRADEANTLFAALPENVRRSMAPRPVATSAPVRNEAKQAL 469

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             GD   A     + +   P+  W+   + + Y      + A + +    +     +   
Sbjct: 470 AAGDTVRAIGLLQQGIQRFPNDGWLKLDLARIYQQQGNMAAATSLMQPLFRAGAGADDLY 529

Query: 226 AILLIA-------RSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKR 277
           A  L A       ++     +        D    + ++  N  MA+   A+  +S+ +  
Sbjct: 530 AAALFASENNAWQQASTLLSRIPPRNQNEDTRSLARRVNFNLQMAT---AQVYLSRGENA 586

Query: 278 KAEVILEK 285
            A   L  
Sbjct: 587 AAANTLRA 594


>gi|301330352|ref|ZP_07222999.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
 gi|300843686|gb|EFK71446.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623


>gi|238498556|ref|XP_002380513.1| cell cycle control protein (Cwf4), putative [Aspergillus flavus
           NRRL3357]
 gi|220693787|gb|EED50132.1| cell cycle control protein (Cwf4), putative [Aspergillus flavus
           NRRL3357]
          Length = 670

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 88/275 (32%), Gaps = 32/275 (11%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  + ++P ++   ++  Y    +  GD              +Y  + L 
Sbjct: 257 KEYERARAIYKYALDRLPRSKSVTLHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-EN 236
            +P    +     +    + +  R      +              R    L I  ++ E 
Sbjct: 316 ENPRNYDIWFDFTRLEETSGDPERVRDTYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEE 375

Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +  D+  +     E LKL            +  A+  I Q + + A   L +   + P 
Sbjct: 376 MEAKDVERARQIYNECLKLIPHKKFTFAKIWLMKAQFEIRQMELQTARKTLGQAIGMCPK 435

Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            ++   Y  L     E    +     +  E N  + +S +  +++   +   D+A A   
Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSNSQSWIQFAELERGLDDSDRARAIFE 494

Query: 350 LAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380
           L ++  P     + ++      E+      D++  
Sbjct: 495 LGIEQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527


>gi|213408162|ref|XP_002174852.1| chaperone activator Sti1 [Schizosaccharomyces japonicus yFS275]
 gi|212002899|gb|EEB08559.1| chaperone activator Sti1 [Schizosaccharomyces japonicus yFS275]
          Length = 582

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 41/148 (27%), Gaps = 22/148 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
               +  +  A E  +  L         T+               +   A+  A +   +
Sbjct: 339 AYQKQGDFTNAIEYFQRSLTEHRSPDILTKL-------------KETEKAKEKADREAYV 385

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P+      A   +   A +++ AI    +  K A    R        R+          
Sbjct: 386 NPELAEQARAKGNELFKAGDFAGAIKEYTEVTKRAPNDPRG----FSNRAAAYLKVMAPA 441

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  D   ++ +      A +  A+ L 
Sbjct: 442 EAIRDCNTAIGIDATFAKAYLRKAQGLF 469


>gi|148668306|gb|EDL00636.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_a [Mus musculus]
 gi|148668307|gb|EDL00637.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_a [Mus musculus]
          Length = 719

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 459 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 514

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 515 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 567


>gi|121701957|ref|XP_001269243.1| cell cycle control protein (Cwf4), putative [Aspergillus clavatus
           NRRL 1]
 gi|119397386|gb|EAW07817.1| cell cycle control protein (Cwf4), putative [Aspergillus clavatus
           NRRL 1]
          Length = 676

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 93/278 (33%), Gaps = 38/278 (13%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  + ++P ++  A++  Y    +  GD              +Y  + L 
Sbjct: 257 KEYERARAIYKYALDRLPRSKSMALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315

Query: 183 ISPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSL 234
            +P     WV  A +++   + +  R      +        +  + W R   + +     
Sbjct: 316 ENPRNYDVWVDFARLEE--TSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYAIW 373

Query: 235 ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           E  +  DM  +     E L+L            +  A+  I Q     A   L +   + 
Sbjct: 374 EEMEAKDMDRARQVYTECLRLIPHKKFTFAKIWLLKAQFDIRQMDLSAARKTLGQAIGMC 433

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHA 346
           P  ++   Y  L  E  + +  R   L E     N  + +S +  +++   +   ++A A
Sbjct: 434 PKDKLFRGYIDL--ERQLFEFVRCRTLYEKQIEWNPSNSQSWIQFAELERGLDDSERARA 491

Query: 347 KAMLAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380
              L +   P     + ++      E+      D++  
Sbjct: 492 IFELGIDQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527


>gi|260845179|ref|YP_003222957.1| hypothetical protein ECO103_3070 [Escherichia coli O103:H2 str.
           12009]
 gi|257760326|dbj|BAI31823.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|323159273|gb|EFZ45260.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623


>gi|86610135|ref|YP_478897.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558677|gb|ABD03634.1| tetratricopeptide repeat protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 643

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 85/258 (32%), Gaps = 26/258 (10%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  +           +    +L   QI L   Q++ A +     L++   R    +++  
Sbjct: 345 AEALAQQQKALGLDPHFSEAHLCVAQIRLKLGQWDEAIDSCWAALELND-RLGLGHAVMG 403

Query: 163 ESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL---AKEWSRAITFLNQKKKNA 218
           ++  R G L +A      AL++           V   +    A   ++A    +Q   N 
Sbjct: 404 QALMRKGQLKAAIAAFRTALNLDLAPELAAGVRVDLGLAMVHAGHLAQASQEFSQVIFNG 463

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKR 277
           + + R +A       L  A +     +  +   +L+L  +   A   AA  L     K+R
Sbjct: 464 Q-FKRQQARAYYGLGLVLASQEQYSEAVKNYRRALELAPDLHEA--MAAIGLAYLGPKQR 520

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            A                   +  +  +     +++  +  + + +  E+   + + +  
Sbjct: 521 DAS---------------GRKF--IQPQQLQQAIQQFEQALKGDPDLPEAHFGMGEASRI 563

Query: 338 MGSIDQAHAKAMLAMKIA 355
            G +  A A    A++  
Sbjct: 564 KGDLTSAEASYRRAIRSN 581



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 9/119 (7%)

Query: 157 VYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +YSL  ++    G+   A     KAL + P        V Q  +   +W  AI       
Sbjct: 330 IYSLLGQAWAEKGNWAEALAQQQKALGLDPHFSEAHLCVAQIRLKLGQWDEAIDSCWAAL 389

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
               E N    +           KG        AI + +   N  +A   AA   +   
Sbjct: 390 ----ELNDRLGLGHAVMGQALMRKGQ----LKAAIAAFRTALNLDLAPELAAGVRVDLG 440


>gi|78357165|ref|YP_388614.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219570|gb|ABB38919.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 483

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 87/238 (36%), Gaps = 33/238 (13%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +   TR   + +L     R  D  +A  Y   +  + P+   + + +V  Y    + S A
Sbjct: 275 KDDNTRFRRIQTLIRA--RFADQEAAMHYFNNSGTLPPELALMGKGIV--YARQNKISTA 330

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
             F +Q    A     + A++L      + +KGD   +      ++    + +MA    A
Sbjct: 331 AEFFDQAVSLAP----SDALVLREAGRFHYNKGDSKRAAGLLQRAVMNNPHDLMALFFFA 386

Query: 268 KSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           + L    +  KA     ++ +  P   E+   Y  +L EN   +L              E
Sbjct: 387 RLLADNGQVDKAVEYYRQVLQKLPEDSEVHYYYGRMLGENN--RL-------------FE 431

Query: 327 SLVIVSKIALEM---GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
             + ++  AL       ++    +A    +    K      A++E+ ++ + ++  +W
Sbjct: 432 GHLQLAYSALYANNKRKVEFHRKQAETLARTEDDK------AELERFDTRHAERAEFW 483


>gi|186685148|ref|YP_001868344.1| hypothetical protein Npun_F5064 [Nostoc punctiforme PCC 73102]
 gi|186467600|gb|ACC83401.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 307

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS---------------LENADKGDMIASYHDAIE 251
           AI +LNQ  +  +      AI    ++               L     G +  S      
Sbjct: 46  AIDWLNQGLQAIQAGKVKDAIAAFKQAAKLDPTLAPAYYNLGLAYRQTGQLQPSADAFYR 105

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTV 308
           + +       A      +L+  N  + A   L++  +++P    A+    L+ E   +  
Sbjct: 106 ATQADPKFAPAFANLGGALLEGNNLQLANDYLQRALELDPKLGFAHYNFGLVREQQGDCE 165

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +    +  E +K + E    +    L+ G +D+A      A+KI P
Sbjct: 166 KAIASFKQAIEYSKNAPEPPYHIGMCYLQQGKLDRARDAFNQAVKINP 213


>gi|330719091|ref|ZP_08313691.1| hypothetical protein LfalK3_07528 [Leuconostoc fallax KCTC 3537]
          Length = 425

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 47/147 (31%), Gaps = 14/147 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SP 185
           A+       A    +  LQ  +     +Y+L  E   +G       YA +A ++     P
Sbjct: 13  AIESGDLVSAQNYFKKSLQNDSDEL--IYNLAEELYGMGFT----HYAKEAYELLLTRYP 66

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
               +  A+    +   E   A+  L+Q    +  +  +  +       E  ++    + 
Sbjct: 67  QEDSIRTALADIAIDDGEIDHALELLSQVNPESDAYVSSLLVKADLYQSEGLNEAAESSL 126

Query: 246 YHDAIESLKLCDNSIMASICAAKSLIS 272
                 + +L  +  +  +  A+    
Sbjct: 127 RR----AQQLMPDHDIIQLALAEFYFD 149


>gi|303247915|ref|ZP_07334182.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
 gi|302490639|gb|EFL50542.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
          Length = 1624

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 85/265 (32%), Gaps = 12/265 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREF 155
             I  A              NE    L        + + + A   L   +    P  RE 
Sbjct: 606 GRIEEAATFLEAALADDPDRNEA--RLYLALARKRQGRSDDAERLLAEAIAKASPFDRE- 662

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
             Y+L   +   G  N A  +  KAL ++P+   + + V+   V   +++ A        
Sbjct: 663 --YALGEFAALDGKENEALAHFRKALTLAPNDDRMRQRVISLLVAGNDFTTARE--YADW 718

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             A+    +RA+   A ++   + GD   S     + L    N+        ++L  Q +
Sbjct: 719 YEARLAKDDRAVFGTA-AVVRLEMGDPAGSESLYRDLLAREPNASDYLAGLGRALNRQTR 777

Query: 276 KRKAEVILEKIWKVNPHPEI-ANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSK 333
            ++    L K +     P + A +   L+        +  A R    + +  E L   ++
Sbjct: 778 YQETVDALGKAYAAKKSPVLGAIVCEALMGLGRYEDVVTEAARGLAAHPKDRELLRYAAE 837

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358
                  +      A   + I P  
Sbjct: 838 ATEFTRDLPACEDYARRGLAIDPDS 862


>gi|241613489|ref|XP_002407411.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes
           scapularis]
 gi|215502791|gb|EEC12285.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes
           scapularis]
          Length = 589

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 13/181 (7%)

Query: 190 VTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             EA++     ++L       +  LNQ        ++ R   LI           +  + 
Sbjct: 307 AAEALLLRGTFHLLQGRSQATLDDLNQLLSMDNISSKVRVNALIKLGTLKVHSEHLDEAL 366

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN--IYTH-- 301
            D   + +L   +    +   + L+  ++       +E+   + P  P  A    Y    
Sbjct: 367 QDFERAAELDPANADIFLHRGQVLMLLDRLEDTLQDMERTCTLRPDFPSAAAQRCYVQYR 426

Query: 302 --LLSENTVGKLKRALRLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             + + +   + K      E+        ES  + +++  E    D+A      A K  P
Sbjct: 427 CGMRATDPEQRQKALDGFAEVQQRFPNCPESYFLHAQLLTETQEFDKAEEYFRKAEKADP 486

Query: 357 R 357
            
Sbjct: 487 T 487


>gi|153006523|ref|YP_001380848.1| hypothetical protein Anae109_3685 [Anaeromyxobacter sp. Fw109-5]
 gi|152030096|gb|ABS27864.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 495

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 7/83 (8%)

Query: 310 KLKRAL-------RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +L R         RL + +     + V +    L+     +A  +  +A+ + P     +
Sbjct: 63  RLARFEDAGDVWQRLVDESPVEPIARVNLGLAWLKAKRYPEAARQLEIALDLNPDHRKAM 122

Query: 363 LLAQIEQANSHNTDKILYWTQSA 385
               +      +      W   A
Sbjct: 123 GYLGLALLEGGDPAAARGWFAKA 145


>gi|39942378|ref|XP_360726.1| hypothetical protein MGG_03269 [Magnaporthe oryzae 70-15]
 gi|145015730|gb|EDK00220.1| hypothetical protein MGG_03269 [Magnaporthe oryzae 70-15]
          Length = 1425

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 49/129 (37%), Gaps = 7/129 (5%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQK 214
            +Y+E C   D N A++   KA+++SP      E + +     ++W          ++  
Sbjct: 579 GIYYEEC-SKDKNRARKCFLKAVELSPSEVDAAERLARSLADERDWDGVELVSQRVVDSG 637

Query: 215 KKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K      ++ + +     +L  A+  K D   +      +L++  +   + +   +S  +
Sbjct: 638 KVRPPPGSKRKGLSWPFAALGVAELNKQDYAKAVVSFQSALRISPDDYHSWVGLGESYYN 697

Query: 273 QNKKRKAEV 281
             +   A  
Sbjct: 698 SGRYIAATK 706


>gi|29345831|ref|NP_809334.1| TPR repeat-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337724|gb|AAO75528.1| tetratricopeptide repeat (TPR) family protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 683

 Score = 40.7 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           + Y+ A E LE +L++    TR + +      S +  D  +A +    AL++    P   
Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTVAALKDFNTALELDKYDPDAW 195

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A     +    ++ A + L++        +   A   I R+L    + ++  +  D   
Sbjct: 196 SARAIVRLQQSNYAEAESDLDRAI----HLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 252 SLKLCDN 258
           +L +  N
Sbjct: 252 ALDIDPN 258


>gi|330945606|gb|EGH47104.1| peptidase aspartic, active site protein [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 294

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 4/90 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD ++A   A +A+   P      + +V   +   +++ A +   +        N 
Sbjct: 79  ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 134

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESL 253
           N A LL+ R       GD   +  D  +++
Sbjct: 135 NDATLLVQRGQMRQRLGDQDGARQDFAQAM 164


>gi|324020004|gb|EGB89223.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623


>gi|229048103|ref|ZP_04193676.1| TPR domain protein [Bacillus cereus AH676]
 gi|228723258|gb|EEL74630.1| TPR domain protein [Bacillus cereus AH676]
          Length = 219

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|218696176|ref|YP_002403843.1| hypothetical protein EC55989_2835 [Escherichia coli 55989]
 gi|218352908|emb|CAU98707.1| conserved hypothetical protein [Escherichia coli 55989]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623


>gi|65321762|ref|ZP_00394721.1| COG0457: FOG: TPR repeat [Bacillus anthracis str. A2012]
          Length = 222

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 14  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 74  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208


>gi|46202722|ref|ZP_00052716.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 344

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 57/192 (29%), Gaps = 8/192 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            A+     A K            ++    L   ++ +  R+   A   L  +L     R 
Sbjct: 84  AASGRSGPAEKSFKRALALAPDLSDAAENL--ARVLIETRRAGEALAPLHAVLAREPGRF 141

Query: 155 FAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
            +   L   + R  GD+  A       LD  P+       +   +    + + A+    +
Sbjct: 142 IS-RHLLGRALRDSGDMEGALAAFKAVLDAQPNFTAAINDLGLLHYACGKGAEALECFER 200

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K   + +    +    R+L          +       LK   ++   ++   K +   
Sbjct: 201 LLKLNPDDH----VAANNRALTLRVLNRPEEAEEQYRAILKRHPDAPEVNLNLGKLIART 256

Query: 274 NKKRKAEVILEK 285
            + + A   L K
Sbjct: 257 GRAQDAAPFLAK 268


>gi|332527783|ref|ZP_08403822.1| putative porphyrin biosynthesis-like protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332112179|gb|EGJ12155.1| putative porphyrin biosynthesis-like protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 417

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 62/245 (25%), Gaps = 23/245 (9%)

Query: 21  VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
           +      V+I W       S  + + I+    FA           ++ P         R 
Sbjct: 21  LGSNDGVVTIYWRGWRTDLSLNLFVLIVVGGAFAITSAAQAVNALVTLPKRAGEWRALRR 80

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ--------QHTFHNEYLVYLLEVQIALA 132
                 AL   L    +     A K  S            +       L +LL       
Sbjct: 81  ERLAQAALREALAEYFSARYSRAHKAASRAIAIQQDSPELRADAEFSVLAHLLAAGSLHR 140

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            +      E L  M                    + D   A+  A +      DA    E
Sbjct: 141 LQDRTRRDELLRQMP------VAGRKGGVGAGRSVDD--GARLLAAEWALDDRDAGRALE 192

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248
            + +        ++A+     K +  +   R    L  AR L        +A+       
Sbjct: 193 LLAELPPGVARRTQALRL---KLQACRLARRPLEALHTARLLAKHQGFSPVAALGLLRSL 249

Query: 249 AIESL 253
           A E+L
Sbjct: 250 AFEAL 254


>gi|330863909|emb|CBX73998.1| uncharacterized protein yciM [Yersinia enterocolitica W22703]
          Length = 231

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 15/167 (8%)

Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K  KE  R   A      +L+     D+  +     ++          SI   +  +++ 
Sbjct: 11  KLGKENQRLEIAHFYCELALQAMGSDDLDKAMSLLKKAASADKQCARVSIMQGRVHLAKG 70

Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           +  K    LE++ +          P ++  Y HL             R  E N  +  + 
Sbjct: 71  EYAKGVEALERVLEQDKEVVSEALPMLSECYQHLQQPEAWANF--LKRCVEDNTGAT-AE 127

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQA 370
           +++++I  +    D A       ++  P   + + L+    A  E+ 
Sbjct: 128 LMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFYRLMDYHLADAEEG 174


>gi|300927079|ref|ZP_07142831.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|300416963|gb|EFK00274.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623


>gi|227818413|ref|YP_002822384.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|227337412|gb|ACP21631.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 635

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 71/243 (29%), Gaps = 24/243 (9%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + + A A  +   AH+    +      R                   A     +AL + P
Sbjct: 372 KSRSAEAGTRDVDAHDLF--LRGREMLRAV--------KKDRDMFEQATACFRQALALDP 421

Query: 186 D--APWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEW---NRNRAILLIARSLENADK 239
           +  AP     +         WS A    L+  ++ A E    +          SL    +
Sbjct: 422 NYAAPCAGLGLAYVLDYQNHWSAAPETSLDAAERFADEAIGKDDQDPFNHFVVSLVAMFR 481

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            +       A  +L L  N   A        +   + + A   +E+  +++P  +     
Sbjct: 482 RNYRRWGESADRALALNPNFASALNMRGVLHLYTGEPKLAIPDIERAMRLDPAVQQQYLH 541

Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +   Y   +  +            E+N  +  S   ++     +G +D+A         
Sbjct: 542 FLGTAYF--VDGDYEKAATLFRDRIEVNPTTDLSRAFLASALGHLGRLDEARRIWGELKD 599

Query: 354 IAP 356
           I P
Sbjct: 600 INP 602


>gi|193064043|ref|ZP_03045128.1| tetratricopeptide repeat protein [Escherichia coli E22]
 gi|194427263|ref|ZP_03059813.1| tetratricopeptide repeat protein [Escherichia coli B171]
 gi|192929278|gb|EDV82887.1| tetratricopeptide repeat protein [Escherichia coli E22]
 gi|194414584|gb|EDX30856.1| tetratricopeptide repeat protein [Escherichia coli B171]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 598


>gi|193068326|ref|ZP_03049289.1| tetratricopeptide repeat protein [Escherichia coli E110019]
 gi|192958278|gb|EDV88718.1| tetratricopeptide repeat protein [Escherichia coli E110019]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623


>gi|326473847|gb|EGD97856.1| DnaJ and TPR domain-containing protein [Trichophyton tonsurans CBS
           112818]
          Length = 771

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199
           Q P          Y +    GD + A ++  +AL + PD+  + + +             
Sbjct: 471 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 526

Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                A+++  AI    +  +         + LL  R+  + +  +   +  D   +L+ 
Sbjct: 527 NAAFKARKYREAIDLYTKGLEVDPNNKDINSKLLQNRAQAHININEYDKAIRDCTSALEC 586

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             N I A    AK+        +A   L+ I + NP
Sbjct: 587 DPNYIKARRVRAKANGGAGNWDEALKELKDIAENNP 622


>gi|324118241|gb|EGC12137.1| tetratricopeptide [Escherichia coli E1167]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623


>gi|323169442|gb|EFZ55115.1| tetratricopeptide repeat family protein [Shigella sonnei 53G]
          Length = 840

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 31/106 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 265 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 324

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            + R G+ ++   +  ++L   P    V        VL+     A 
Sbjct: 325 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 370


>gi|269148527|gb|ACZ28663.1| peptidase M48 family [uncultured organism]
          Length = 428

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 36/194 (18%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--------REFAVYS 159
           + +          L        +      N A +          T        R  +  S
Sbjct: 180 AGLRALELLQTHPLTL------SRIADARNRAEQIATGSKGDNLTFQLIKARVRVLSGDS 233

Query: 160 LYFESCRIGD--LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           +Y +  +  D    +A +Y  +AL+      W++          K++ +A   + Q  KN
Sbjct: 234 IYLQRQKAADEIPQAAIQY-RQALN------WLS---------EKQYDKARNAIRQLLKN 277

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               +  R +  +  +          A++     +L L  N++  +   A++L+ +    
Sbjct: 278 ----DSQRVLYHLTAAEIELAADKPQAAHKVLASALILFPNNLPLTEMLAETLLKEGNVT 333

Query: 278 KAEVILEKIWKVNP 291
           +A  +LE+  +  P
Sbjct: 334 EASALLEQQLRYQP 347



 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 77/240 (32%), Gaps = 33/240 (13%)

Query: 69  PAMLFHMLHKRNYD-------KGYKA---LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118
           P  L  +   RN         KG      L    + + + +         Y+ +Q     
Sbjct: 192 PLTLSRIADARNRAEQIATGSKGDNLTFQLIKARVRVLSGDSI-------YLQRQKAADE 244

Query: 119 EYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQ 174
                +   Q    L+E+QY+ A   +  +L+  + R   +Y L             +A 
Sbjct: 245 IPQAAIQYRQALNWLSEKQYDKARNAIRQLLKNDSQRV--LYHLTAAEIELAADKPQAAH 302

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           +    AL + P+   +TE + +  +     + A   L Q+ +   E  R    L    + 
Sbjct: 303 KVLASALILFPNNLPLTEMLAETLLKEGNVTEASALLEQQLRYQPE--RRLYTLHFQAAK 360

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKVN 290
                 D   S  +    L+  D + + +I   K  I Q  K +    A       WK  
Sbjct: 361 TARRYADAYQSLAE----LQYIDGNTVQAITYLKQAIEQGTKSQYEQLAMQARLAAWKKE 416


>gi|253567817|ref|ZP_04845228.1| tetratricopeptide repeat family protein [Bacteroides sp. 1_1_6]
 gi|251841890|gb|EES69970.1| tetratricopeptide repeat family protein [Bacteroides sp. 1_1_6]
          Length = 683

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           + Y+ A E LE +L++    TR + +      S +  D  +A +    AL++    P   
Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTVAALKDFNTALELDKYDPDAW 195

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            A     +    ++ A + L++        +   A   I R+L    + ++  +  D   
Sbjct: 196 SARAIVRLQQSNYAEAESDLDRAI----HLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 252 SLKLCDN 258
           +L +  N
Sbjct: 252 ALDIDPN 258


>gi|257058790|ref|YP_003136678.1| hypotheticalprotein [Cyanothece sp. PCC 8802]
 gi|256588956|gb|ACU99842.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 22/203 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE---- 154
           +  LA ++ + +    +   E +  L+E   A AE+  +          + P T +    
Sbjct: 195 DSDLAEQLAAQLGIPSSNPQEIINALMEQFQAQAEQDQSQ---------ETPQTEQEWFN 245

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +     E  R GDL  A     +AL+I+P                  +  AI   ++ 
Sbjct: 246 LGL-----EQARQGDLEGAIASWDRALEINPSLAEGWHNRGSALGTLGRFDEAINSFDRA 300

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                +    +A  L   +L N  + +   +     ++L++      A    + +L    
Sbjct: 301 IY--LDAQDFQAWNLKGNALYNLQQWE--GAITCWDKALEVRPEFYQAWYNRSSALEELG 356

Query: 275 KKRKAEVILEKIWKVNPHPEIAN 297
           +  +A     K  ++ P  E+A+
Sbjct: 357 RTEEAIAGYRKALEIEPTFELAS 379


>gi|254427253|ref|ZP_05040960.1| Sulfotransferase domain family [Alcanivorax sp. DG881]
 gi|196193422|gb|EDX88381.1| Sulfotransferase domain family [Alcanivorax sp. DG881]
          Length = 529

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A  A+ ++P      +   Q +     W++A+  LN+  K +   N     L  A 
Sbjct: 60  AKTLAELAVKMAPKNWRSWQLSYQAHHADAHWAQALKSLNKIAKLSPSINAEH-YLAKAE 118

Query: 233 SLENADKGDMIASYHDAIESL 253
           +LE   + D   +    +++L
Sbjct: 119 ALERLFRPDEALACLAELDAL 139


>gi|14042273|dbj|BAB55179.1| unnamed protein product [Homo sapiens]
          Length = 479

 Score = 40.7 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + EW                     A +        ADKG+  A+  +  E+++L    
Sbjct: 198 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRNYREAVRLNPKY 253

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR   
Sbjct: 254 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 306


>gi|254422573|ref|ZP_05036291.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196190062|gb|EDX85026.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 248

 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 52/175 (29%), Gaps = 14/175 (8%)

Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYA 177
             LL  Q         +  A + L  ++    T         L + +   GD   A    
Sbjct: 52  TLLLRKQAGDEAKKGNHITAVKILSHLIVREPTNPENLVNRGLMYSNLGRGDD--ALADY 109

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A++++P            + +   W  AI   ++         R R    + +++   
Sbjct: 110 NRAIELNPKFDRAFSNRGNLHAIRHNWQDAIADYDEAIDLNPLNIRAR----LNQAVTFR 165

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + G+   +      +L     S +      ++   Q  + +A       +    H
Sbjct: 166 EMGNYEEALICLDIALFFRPKSAVLYAERGRTYHLQGYRNRA----IAAYTTACH 216


>gi|182412282|ref|YP_001817348.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177839496|gb|ACB73748.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 1087

 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 15/182 (8%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L++     +   R   +L    +     +     +   A E L+   +   A +   +
Sbjct: 518 RALDEFLMPGRATRRVPRLLATGWAYFGLKEW--ARAGSCACEVLRSDPDQAEAHLLLGR 575

Query: 269 SLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
           SL+     R     L++  ++ P        +A  Y  +  +     +     LE     
Sbjct: 576 SLMRSENIRDGLTSLQRATELAPSEAAAWRALAEAYAQIE-DAAAALVAAERALEHGRDV 634

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQ----IEQANSHNTD 376
              S  +V+  AL + + ++A A     ++  P   R + +LLLA+    I +     + 
Sbjct: 635 DYRSHFLVAWAALTVTNHERARAVLAQILQAQPGNLRAKRWLLLAEGQANIPKGEISPSA 694

Query: 377 KI 378
           +I
Sbjct: 695 RI 696


>gi|10435748|dbj|BAB14659.1| unnamed protein product [Homo sapiens]
          Length = 512

 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 9/164 (5%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +   + + + RAI  +    +  + W R   + +     E  +  D   +      SL+L
Sbjct: 170 EAEAVREAYERAIANVPP-IQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLEL 228

Query: 256 CD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTV 308
                       I  A+  I Q     A   L       P  ++  +Y  L     E   
Sbjct: 229 IPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDR 288

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            + K   +  E   E+  S +  +++   +G ID+A A   LA+
Sbjct: 289 CR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAI 331


>gi|332847547|ref|XP_003315475.1| PREDICTED: dnaJ homolog subfamily C member 7 isoform 2 [Pan
           troglodytes]
 gi|332847549|ref|XP_003315476.1| PREDICTED: dnaJ homolog subfamily C member 7 isoform 3 [Pan
           troglodytes]
          Length = 438

 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    +  A ++  
Sbjct: 123 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 178

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 179 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 238

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+
Sbjct: 239 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 298

Query: 287 WKVN 290
           ++  
Sbjct: 299 YQTE 302


>gi|126297642|ref|XP_001365692.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 483

 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 24/197 (12%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR- 223
              G+   A    +KA++++P          + Y+   ++S A   L +    A    + 
Sbjct: 1   MSSGEWEKAVLSFSKAINLNPQLVEAYVLRAEAYIQLCDFSSASQNLRKAIVLAPYRPQL 60

Query: 224 --NRAILLIARSLENADKGDMIASYHDAIESLKLCD-----NSIMASICAAKSLISQNKK 276
                 +L  +     ++   + +     ++ +L            +   A       K 
Sbjct: 61  IDRLCFVLYVQGQCLFEEESYLKALDVFTQASELQPLKSSYRFRSIACLLA-----MKKH 115

Query: 277 RKAEVILEKIWKVNPHPEI----ANIY-THLLSENTVGKLKRALRLEEINKESVESLVIV 331
           ++   I+ K  K + +P++    A +Y   L        L RALR   I  E  E+  ++
Sbjct: 116 QECLGIITKELKQHANPDVYILRARLYNFFLKPNQCYQDLHRALR---IKPEHPEANTLL 172

Query: 332 SKIALEMGSIDQAHAKA 348
            K+ ++      A  +A
Sbjct: 173 EKLLMQARK---AREEA 186


>gi|75910095|ref|YP_324391.1| photosystem I assembly protein Ycf3 [Anabaena variabilis ATCC
           29413]
 gi|75703820|gb|ABA23496.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 196

 Score = 40.7 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174
            E  VY  +   A AE +Y  A E  E  +     T +    +Y++       GD + A 
Sbjct: 56  KEAFVYYRDGMSAQAEGEYAEALEYYEEALTLEEDTNDRGYILYNMGLIYASNGDHDKAL 115

Query: 175 RYATKALDISPDAPWV--TEAVVQQYVLA-----KEWSRAITFLNQK 214
               +A++++P  P      AV+  Y         +        +Q 
Sbjct: 116 ELYHQAIELNPRLPQALNNIAVIYHYKGEKAKEDGDHDGGEALFDQA 162


>gi|297172356|gb|ADI23331.1| hypothetical protein [uncultured Oceanospirillales bacterium
           HF0770_27O18]
          Length = 149

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 40/93 (43%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++   G+  +A RY  +AL ++P++ W+   +    +   +   A  F  +  + A + +
Sbjct: 51  QARAQGETGAASRYLERALTMAPNSSWLYRELALLRLEEGDGHAAEGFAQRALRLAPDND 110

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             RA L    +   A++GD   +      +  L
Sbjct: 111 DYRAELWELVAAARAEQGDRSGADEARARAQAL 143



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 4/118 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A K     +      +  +  L   + A A+ +   A   LE  L +     +    L  
Sbjct: 25  AEKAEPVTADTELKGSPAMALLSRAEQARAQGETGAASRYLERALTMAPNSSWLYRELAL 84

Query: 163 ESCRIGDLNSAQRYATKALDISPDA----PWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                GD ++A+ +A +AL ++PD       + E V        + S A     + + 
Sbjct: 85  LRLEEGDGHAAEGFAQRALRLAPDNDDYRAELWELVAAARAEQGDRSGADEARARAQA 142


>gi|308271574|emb|CBX28182.1| hypothetical protein N47_G35060 [uncultured Desulfobacterium sp.]
          Length = 490

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 8/106 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A  L     +  A    +K  + NP       ++  +Y            K       + 
Sbjct: 324 ALVLSESGDRSDAIAYFKKALEENPFDPDILRDLGKVYF--QDGQYPEAQKTLEGAVSLA 381

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQ 366
            +  E+L+ + +I  E G  + A    +   +  P  K    LL +
Sbjct: 382 PDDPETLLFLGRIKAETGKFNDARKLFLTITEKYPYYKRALYLLGE 427



 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 8/83 (9%)

Query: 133 ERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + A    +  L+     P      +  L     + G    AQ+    A+ ++PD P
Sbjct: 330 SGDRSDAIAYFKKALEENPFDPDI----LRDLGKVYFQDGQYPEAQKTLEGAVSLAPDDP 385

Query: 189 WVTEAVVQQYVLAKEWSRAITFL 211
                + +      +++ A    
Sbjct: 386 ETLLFLGRIKAETGKFNDARKLF 408


>gi|295689041|ref|YP_003592734.1| tetratricopeptide repeat-containing protein [Caulobacter segnis
           ATCC 21756]
 gi|295430944|gb|ADG10116.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter segnis ATCC
           21756]
          Length = 577

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 62/197 (31%), Gaps = 10/197 (5%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A   A  A   +P+      A+        +W  ++  L+            R  
Sbjct: 356 GDKAKALEVARAAAAAAPNNRDAQVALADLLRSGGQWDESVAVLDPLIAGEAASPDWR-- 413

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVILEKI 286
           LL  R++     G    +  D   +LKL  +          + I + +  ++A  +++K 
Sbjct: 414 LLYLRAVSLEQGGRWPEAERDLQAALKLNPDEPELLNFLGYTWIDRGEHLKEALAMVQKA 473

Query: 287 WKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
               P        +   Y  L    T   +++     E+     +    +      +G  
Sbjct: 474 VDARPQSGAMLDSLGWAYYRLGDYKTA--VEKLEAAAEMEPGDPDVNDHLGDAYWRVGRK 531

Query: 342 DQAHAKAMLAMKIAPRK 358
            +A  +    + + P +
Sbjct: 532 TEATFQWRRVLSLEPTE 548


>gi|303315935|ref|XP_003067972.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107648|gb|EER25827.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032086|gb|EFW14042.1| translation repressor/antiviral protein Ski3 [Coccidioides
           posadasii str. Silveira]
          Length = 1412

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 65/231 (28%), Gaps = 29/231 (12%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              + + +  A +  E +L+   T    +  L        D + A     KAL   P   
Sbjct: 424 TYQSPKNHPEAKQIFEEILKRNQTSTKCLLGLGLIFEEDQDYDQAVALLEKALQRDPKNA 483

Query: 189 WVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
            V   +        E  +A       L   +    ++   +A++L        +      
Sbjct: 484 RVRCELFWCRAHCGELQQAARGLEETLTMIQCEQSQYRDLKAVILYRIGQCQWELDPSPT 543

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +  D   +      SI +++  A +  S                      +   Y     
Sbjct: 544 ARKDRNGAYAKFLGSIQSNMNYAPAYTS----------------------LGIFYADYKK 581

Query: 305 ENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +    + KR   +  E++    E+   +++     G  D   A A   +  
Sbjct: 582 D--QKRAKRCFHKAIELSSSETEAAERLARDFANQGDWDLVEAIAQRVVDS 630


>gi|182412343|ref|YP_001817409.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177839557|gb|ACB73809.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 478

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 60/197 (30%), Gaps = 8/197 (4%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++  V L     A  E +   A   LE  L +          +       GDL  A+R+ 
Sbjct: 254 HDPYVLLTAASTAWVEERAERAFALLERALTLAPGDARLHRQMAKMLSARGDLAGARRHL 313

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            + + ++P    +   ++       +       L +        N     +     +  A
Sbjct: 314 EEGVALAPTNDSIQLDLIGILHQLND----TAALQRVVAAGLAANPESPAMHFEAGMAAA 369

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVNPHPE 294
             G +  +      + +   + I A+I  A       +      +L+     +   P P 
Sbjct: 370 AAGRLEEAAQHLEFTWRTSPDQIAAAIELANVYFRAGRGDDGVALLQDAITKFSHKPAPL 429

Query: 295 IANIYTH-LLSENTVGK 310
           +  +  H + + +   +
Sbjct: 430 LLVLIRHGIETGDPRTR 446


>gi|148668309|gb|EDL00639.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_c [Mus musculus]
          Length = 767

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 485 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 540

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 541 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 593


>gi|119484402|ref|ZP_01619019.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119457876|gb|EAW38999.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 566

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 77/208 (37%), Gaps = 11/208 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + +     +A     + L ++PD+P V  +  Q  +  +++  AI   ++  +    +  
Sbjct: 281 ALKSQWPEAALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNFPE 340

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 + R +   + G    +      +L++  + +    C  ++L   ++  +A +  
Sbjct: 341 ----AWLGRGIALCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQLDRYEEAVIAY 396

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIAL 336
           +K+  +    +       L     + KL+R         ++  +  ++ E+ + + +   
Sbjct: 397 DKVLLLTSENQTLATQAGLQRGEALEKLERYSEAIVAYKKVVRLRPDNFEAWIKLGQACE 456

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           ++     A      A++I P      L+
Sbjct: 457 QVQQYSSAFEAYSQAIQIWPDNYTVRLM 484


>gi|94272126|ref|ZP_01292074.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93450229|gb|EAT01514.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 216

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            L E + A     +  A    +  + + P +RE A+  L   +    D  +A     + L
Sbjct: 24  LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAAM-GLATVAQSRNDPLTALHLYQQIL 82

Query: 182 DISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +  P      + +V        A         LN+        +   A L +     +A 
Sbjct: 83  ERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNR--------HPQAAPLHLTMGNLHAS 134

Query: 239 KGDMIASYHDAIESL 253
           +G+   +      +L
Sbjct: 135 QGEWTRARRAYQNAL 149


>gi|58037339|ref|NP_082927.1| transmembrane and TPR repeat-containing protein 4 [Mus musculus]
 gi|81913085|sp|Q8BG19|TMTC4_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 4
 gi|26329567|dbj|BAC28522.1| unnamed protein product [Mus musculus]
 gi|26335635|dbj|BAC31518.1| unnamed protein product [Mus musculus]
 gi|26336430|dbj|BAC31900.1| unnamed protein product [Mus musculus]
 gi|26337207|dbj|BAC32288.1| unnamed protein product [Mus musculus]
 gi|26340478|dbj|BAC33902.1| unnamed protein product [Mus musculus]
          Length = 741

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 459 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 514

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 515 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 567


>gi|134301125|ref|YP_001114621.1| TPR repeat-containing protein [Desulfotomaculum reducens MI-1]
 gi|134053825|gb|ABO51796.1| TPR repeat-containing protein [Desulfotomaculum reducens MI-1]
          Length = 193

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 55/162 (33%), Gaps = 16/162 (9%)

Query: 88  LYTGLMSIA---------AHNIPLARKMHSYVSQQHT--FHNEYLVYLLEVQI--ALAER 134
           L  GL++ +               A  +   +         N     LL       +   
Sbjct: 28  LSIGLIASSIAWTGIGDITGQTDTATTLEERIQNLELQAKKNPEDKGLLAALASYYIQAG 87

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           + ++A E  E ++++      +  +L       G L++A++    AL++ P    V    
Sbjct: 88  KVDLARESYEKLVKLDPKDISSRQNLALLYYTQGKLDAAEQELKNALEVEPSNAEVNYQY 147

Query: 195 VQQYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARS 233
            +     +++  AI+ + +    +K     +  R  +   ++
Sbjct: 148 AKLLGEKRDYKLAISHMEKFLASQKEGPRADEARKFIEAWKA 189


>gi|324013563|gb|EGB82782.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|323489695|ref|ZP_08094922.1| hypothetical protein GPDM_10120 [Planococcus donghaensis MPA1U2]
 gi|323396826|gb|EGA89645.1| hypothetical protein GPDM_10120 [Planococcus donghaensis MPA1U2]
          Length = 417

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 54/169 (31%), Gaps = 14/169 (8%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRY 176
            YLL+ Q       Y  A++ +   L                     + ++G       +
Sbjct: 239 AYLLKAQSYNMAEDYQPAYQAISEGLARDEFDKELYLFAG-----KLALKLGKAEEGVEH 293

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A+ + P+       +V  +   ++    +       ++  +W     ++  A     
Sbjct: 294 LRQAIALDPEYMEAIYTLVSYFHAQEQDEEVLELAEMVVESGDDWAGLYPMVAEAYERTE 353

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             K   +  Y  A  S K   + +         LI + K+ +A  I+++
Sbjct: 354 NYKQATVY-YDKAYSSFKDDADFLKKYTL---FLIEEGKRERALEIIKE 398


>gi|315505218|ref|YP_004084105.1| tetratricopeptide tpr_1 repeat-containing protein [Micromonospora
           sp. L5]
 gi|315411837|gb|ADU09954.1| Tetratricopeptide TPR_1 repeat-containing protein [Micromonospora
           sp. L5]
          Length = 567

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 85/244 (34%), Gaps = 23/244 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLAKEWSRAITFLNQKKKN- 217
           D   A+ +   AL ++ +       ++               A    RA+  ++      
Sbjct: 238 DPALARHWLEVALRLAAELADPRRRLLSTVFYEQGLALLDSRAGRPDRALRLVDDGLTRL 297

Query: 218 -----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                  E  ++ A L   R+  +   GD   +  D    +    ++    +  A    +
Sbjct: 298 TAALGPGERPQDLARLRHNRAQVHLALGDPARALADLDTVIAHDPDNCEYYVDRAALHRA 357

Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRA----LRLEEINKESVES 327
             + R A    +   ++ PH PE    Y   + +   G+ +RA     R+  I    +++
Sbjct: 358 AGRTRAAIRDYDAAIRLGPHLPE--AYYNRAVLQQERGRPERARADLERVLAIEPGHLDA 415

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            + +  + +E G++D A A A   +  AP++   L    +  A      +       AL+
Sbjct: 416 RIALVNLHVERGALDAAEAGARAGLAGAPQEPALLCTLGLVLAERGRPAEADELLTRALN 475

Query: 388 AMPD 391
             P+
Sbjct: 476 GDPE 479


>gi|188997419|ref|YP_001931670.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932486|gb|ACD67116.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 105

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           +   +  + + + P      +Y L  E  + G    A  Y  K L +  D       + Q
Sbjct: 2   DRIEQLKKALEKDPN-NPLGLYGLALELYKQGLYEDAIVYFKKYLSLYEDQGAAYRTLAQ 60

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            Y+   +  +AI    +  + A+++N    +    + +E  
Sbjct: 61  CYINIGDIEQAIETYERGIEKARKYNHPTMVEEFKQEIERL 101


>gi|167581033|ref|ZP_02373907.1| TPR domain protein [Burkholderia thailandensis TXDOH]
          Length = 614

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 68/234 (29%), Gaps = 16/234 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L   +  + +         L +        A+ +++ A +  +  L +         +
Sbjct: 83  GRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRALALAPGDASIHNN 142

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G    A     +AL++ P        +        +   A+           
Sbjct: 143 LGNALNALGRHGDALAAFRRALELRPGHAGAHNNLGMALAALGDTEEAVAHFRAALAAEP 202

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            +    A   +  +L+    G    +      +L L     +A    A +L +  + R A
Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAQALSAFESALALQPRFPLALFGLANALAALGRHRDA 258

Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321
               E+   ++P            H  +      L + +   +L  +  L +++
Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 312



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L+ A+     AL  +P                     A   + +      E   
Sbjct: 11  AHRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 66

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N A L +         G +  +      +L L     +A      +  +Q +   A    
Sbjct: 67  NDAALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 126

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           ++   + P     H  + N    L        L    R  E+      +   +      +
Sbjct: 127 QRALALAPGDASIHNNLGNALNALGRHG--DALAAFRRALELRPGHAGAHNNLGMALAAL 184

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  ++A A    A+   PR
Sbjct: 185 GDTEEAVAHFRAALAAEPR 203


>gi|170100523|ref|XP_001881479.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643438|gb|EDR07690.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1213

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 65/201 (32%), Gaps = 34/201 (16%)

Query: 96   AAHNIPLARKMHSYVSQQHTFHNEY-------LVYLLEVQIAL--AERQYNIAHEKL-EM 145
            A++++  A  +H          +         L   L+ +     A    + A     E 
Sbjct: 926  ASNDLDEAISLHQEALLLRPAPHPERSSSLNNLANALQSRFEQQGASNDLDKAISLHQEA 985

Query: 146  MLQIPATR----------EFAVYSLYFESCRIGDLNSAQRYATKALDISP---------- 185
            +L  PA              A+   + +     DL+ A     +AL + P          
Sbjct: 986  LLLQPAPHPDRSSSLNNLAAALQGHFEQRGASNDLDEAISLHREALLLQPAPHPCRSHSL 1045

Query: 186  -DAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLEN-ADKGD 241
             +     ++  +Q   + +   AI+   +    + A   +R+ ++  +A +L++  ++  
Sbjct: 1046 NNLANALQSRFEQRGASNDLDEAISLHREALLLRPAPHPDRSSSLNNLADALQSRFEQRG 1105

Query: 242  MIASYHDAIESLKLCDNSIMA 262
                  +AI   +       A
Sbjct: 1106 ASNDLDEAISLHREALLLRPA 1126


>gi|147919338|ref|YP_686926.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon
           RC-I]
 gi|110622322|emb|CAJ37600.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon
           RC-I]
          Length = 310

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 15/201 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G+   A     K  ++ PD       + +       +  A+   ++  +  +++   
Sbjct: 34  RDMGNYGRAVEEFRKMSELEPDDAEAHRLLGEALYRNGAYEEALKEFDKAIQLDEDYTEA 93

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           R      +S+  A  G    S  +   +       +      AK + +  K  +A  +  
Sbjct: 94  R----YWKSIVYAKMGREKESSQEYRTAYDSDPEDVELMYEWAKEVAAAGKYYEAIRVYR 149

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRAL------RLEEIN-KESVESLVIVSKIALE 337
            I     HPE       L   + + +  +         L   +  ++     ++ +  L 
Sbjct: 150 DILIA--HPEYYEARVDL--GSALIRAGKENEGYEEYALARASDPDNPMIPFMIGEFLLS 205

Query: 338 MGSIDQAHAKAMLAMKIAPRK 358
           M  +D+A      A +++P  
Sbjct: 206 MDRLDEALDAFKSAQELSPNA 226



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 73/264 (27%), Gaps = 49/264 (18%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVT- 191
             Y  A E+   M ++      A   L  E+  R G    A +   KA+ +  D      
Sbjct: 37  GNYGRAVEEFRKMSELEPDDAEAHR-LLGEALYRNGAYEEALKEFDKAIQLDEDYTEARY 95

Query: 192 -----EAVVQQY----------------------------VLAKEWSRAITFLNQKKKNA 218
                 A + +                               A ++  AI          
Sbjct: 96  WKSIVYAKMGREKESSQEYRTAYDSDPEDVELMYEWAKEVAAAGKYYEAIRVYRDILIAH 155

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E+   R  L  A        G     Y +   +     ++ M      + L+S ++  +
Sbjct: 156 PEYYEARVDLGSA----LIRAGKENEGYEEYALARASDPDNPMIPFMIGEFLLSMDRLDE 211

Query: 279 AEVILEKIWKVNP-HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332
           A    +   +++P  P+   +Y  +             +    +        VE    + 
Sbjct: 212 ALDAFKSAQELSPNAPD---VYRRIGDVLHRKGRVDEAISEYKKAIRQKPHDVELHAGLG 268

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
            + LE G  D A  +     K+ P
Sbjct: 269 DLYLEKGMKDDAVREYRRVKKLEP 292


>gi|148263389|ref|YP_001230095.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146396889|gb|ABQ25522.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 638

 Score = 40.7 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 22/182 (12%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++ +  W              WS             K   ++R    +  +L   ++
Sbjct: 460 AAGMARNTIWADSVTF--------WSD---------VARKSPKKSRVHTNLGIAL--FEQ 500

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G   A   +   +++L  +   A I   KSL+ Q    +A   L    ++NPH  + +++
Sbjct: 501 GKTGAGIEEFRTAIRLKPSDTNARINLGKSLLIQKMYDEAASELLTAARLNPHDPVPHVF 560

Query: 300 THLLSENTVGKL-KRALRLEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             L+ E        R   L  I     S ++ + + ++  +   I  A  +   A+++ P
Sbjct: 561 LGLVYEGKGELSNARWAYLAAIKISPASPDAHIRLGELYAKEEKIQDAKREYEAALRLYP 620

Query: 357 RK 358
            +
Sbjct: 621 DE 622


>gi|332702922|ref|ZP_08423010.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553071|gb|EGJ50115.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 474

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 60/144 (41%), Gaps = 15/144 (10%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+ +   +  +G+   +     E+L+   +S  A +    +L +  +   A       + 
Sbjct: 152 LLEKGKSHLLRGNTSMAMTLGEEALRHKPDSPSALMLVGDALRAMERHEDALS----AYA 207

Query: 289 VNPHPE---------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
              H           +   Y+ L   ++V +L+   RL+ ++  +VE  V +  + L++G
Sbjct: 208 EAHHSAELYLEPIKRLIQTYSEL--GDSVKELEYLERLDRLSPLNVERKVQIGGLKLKLG 265

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363
           ++  A  +   A+K+   + + L+
Sbjct: 266 NLSAADREFGKAVKLTTDQAMSLI 289


>gi|297172794|gb|ADI23758.1| hypothetical protein [uncultured Oceanospirillales bacterium
           HF4000_43P14]
          Length = 149

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 40/93 (43%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++   G+  +A RY  +AL ++P++ W+   +    +   +   A  F  +  + A + +
Sbjct: 51  QARAQGETGAASRYLERALTMAPNSSWLYRELALLRLEEGDGHAAEGFAQRALRLAPDND 110

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             RA L    +   A++GD   +      +  L
Sbjct: 111 DYRAELWELVAAARAEQGDRSGADEARARAQAL 143



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 4/118 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A K     +      +  +  L   + A A+ +   A   LE  L +     +    L  
Sbjct: 25  AEKAEPVTADTELQGSPAMALLSRAEQARAQGETGAASRYLERALTMAPNSSWLYRELAL 84

Query: 163 ESCRIGDLNSAQRYATKALDISPDA----PWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                GD ++A+ +A +AL ++PD       + E V        + S A     + + 
Sbjct: 85  LRLEEGDGHAAEGFAQRALRLAPDNDDYRAELWELVAAARAEQGDRSGADEARARAQA 142


>gi|289643933|ref|ZP_06476036.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506262|gb|EFD27258.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 216

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 2/116 (1%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y     G+  +   N   A ++ ++              L   +      QY  A E   
Sbjct: 94  YDWYTRGVALLDRGNANAAVQLLAHAVAAEPGSRSVREAL--ARAQFDAGQYGAARESFA 151

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            ++    T ++A + L   + R GDL +A  +   A+ + PD     +A+      
Sbjct: 152 WIVAHDPTDDYAQFGLGMAARRTGDLRAAVEHLALAVAMRPDLGHYGQALRGVRAA 207


>gi|283788209|ref|YP_003368074.1| TPR repeat lipoprotein [Citrobacter rodentium ICC168]
 gi|282951663|emb|CBG91363.1| TPR repeat lipoprotein [Citrobacter rodentium ICC168]
          Length = 294

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 19/218 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIM 261
           +  A    +   +    +N       + R +     G    +  D +   +   N     
Sbjct: 112 FDAAYEAFDSVLELDPTYN----YAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 167

Query: 262 ASICAAKSLISQNKKRKA-----EVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKR-A 314
             +  A+  + + + ++A     +   ++ W  N    I   Y   +SE+T+  +LK  A
Sbjct: 168 LWLYLAEQKLDEKQAKEALRQRFDKSDKEQWGWN----IVEFYLGDISESTLMERLKADA 223

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                + +   E+   + K  L +G +D A A   LA+
Sbjct: 224 TDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAV 261


>gi|282162848|ref|YP_003355233.1| hypothetical protein MCP_0178 [Methanocella paludicola SANAE]
 gi|282155162|dbj|BAI60250.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 373

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 98/312 (31%), Gaps = 20/312 (6%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH-------------NEYLVYLLEVQI 129
           +    +  GL+       P A K  +Y+ ++   H             ++   +      
Sbjct: 18  RALGLITKGLLVDGRAEEPGAEKARAYLGRRDYAHAAEELKKAISSHPDDPEAHYDLGVA 77

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   + + A       +++      A Y+L     + G L+ A R   +A  + PD   
Sbjct: 78  LVRAGKLDDAMGSFVAAIKLDPGFAEAHYNLGVVFAKKGMLDDAIREYNRAARLRPDYAK 137

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +            A + L           R +A+    R +E A + + I S  + 
Sbjct: 138 AHFNLALALTNKGLHDHAKSELMA----VGGIRRRQALEHYNRGVELAGRDEAILSMAEF 193

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSEN 306
            E+L+L      A       L       +A     +   +NP  PE+           E+
Sbjct: 194 REALRLDPGLYQAYNNIGAMLAHNGMIDRAVAEYGRGLSINPDDPELHFNMALALSARED 253

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               LK       ++    E+   + K    +  +D A ++   A+ + P   +  L   
Sbjct: 254 HGAALKELGEAVRLSPNFAEAHYSLGKTLAALDKLDWAVSEYKEALSLDPGLSMAYLDMG 313

Query: 367 IEQANSHNTDKI 378
           +    S + +  
Sbjct: 314 VALEESGDLEAA 325


>gi|229093466|ref|ZP_04224569.1| TPR domain protein [Bacillus cereus Rock3-42]
 gi|228689937|gb|EEL43741.1| TPR domain protein [Bacillus cereus Rock3-42]
          Length = 219

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|297201942|ref|ZP_06919339.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148002|gb|EDY56715.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 777

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 59/185 (31%), Gaps = 20/185 (10%)

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE--------NADKGDMI 243
            A++      K W       ++ ++  +E+    A    A   +            G   
Sbjct: 230 TAILHFTGRHKPWQGGEAGYSRAEERWREFELTDAEFQAAYMEQQGSLHHDLIVHYGTPH 289

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPEIANIYTHL 302
            +    +E+ +     + A+  ++              I L++ W   PH  + +    L
Sbjct: 290 VARTGDVEAARK----VAAAHISSGDYQDAVDVLSGVRIPLDEAW---PHEVLGHA---L 339

Query: 303 LSENTVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +S +   + K  L L         +    ++++A   G   +A   A   + + P     
Sbjct: 340 MSVSRYDEAKTQLLLASAAPNRAATAYARLAQMAWVHGDNTEALRHATAGLAVDPTHRSS 399

Query: 362 LLLAQ 366
            L AQ
Sbjct: 400 RLWAQ 404


>gi|218690664|ref|YP_002398876.1| hypothetical protein ECED1_2976 [Escherichia coli ED1a]
 gi|218428228|emb|CAR09144.2| conserved hypothetical protein [Escherichia coli ED1a]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|222110041|ref|YP_002552305.1| tpr repeat-containing protein [Acidovorax ebreus TPSY]
 gi|221729485|gb|ACM32305.1| TPR repeat-containing protein [Acidovorax ebreus TPSY]
          Length = 574

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 63/219 (28%), Gaps = 14/219 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQ---IALA--ERQYNIA 139
           +AL    +     +  +A K   Y   +      E    LL  Q    AL   + +   A
Sbjct: 320 RALTQAYLM----HAQVAEKRGDYAGAEGWLSRIEDAAELLTAQSRRAALLVRQGKLEEA 375

Query: 140 HEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
              +  +    P      + +             A     KA+ ++P    +        
Sbjct: 376 RALIRAVPASTPDQERLKLQAEAQLLREAKQYAQAYTVLGKAVALAPADNDLAYDQAMLA 435

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             A         L        +++     L  + +        +  +    +++L+   N
Sbjct: 436 EKAGRLDDMERLLRAIIARQPDYHHALNALGFSLA---ERGVRLEEAKALIVKALEFAPN 492

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
               +            +++A  IL++ ++  P  EIA 
Sbjct: 493 DPFITDSLGWVEFRLGNRQEALTILKRAYETQPDAEIAA 531


>gi|206559756|ref|YP_002230520.1| putative cellulose biosynthesis protein [Burkholderia cenocepacia
           J2315]
 gi|198035797|emb|CAR51688.1| putative cellulose biosynthesis protein [Burkholderia cenocepacia
           J2315]
          Length = 1245

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 52/306 (16%)

Query: 72  LFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLAR-----------------KMHSYVS 111
           L      R     D  Y A   GL ++A  ++  A                       + 
Sbjct: 223 LDRQRDARRRLERDPDYIAQQRGLQALARGDLAAADPLLARAARARADDADALGGLGLLR 282

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
            +   H+E    +L  + A           K + + +    + + + +   E+   G   
Sbjct: 283 LREGRHDEA--RVLFARAATRATDQ---RGKWQSLART--AQFWGLLAQGREAASAGRPK 335

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A+R A  AL + PD P     +    +  ++W++A   L                LL A
Sbjct: 336 EAERAARAALAMQPDNPDAKLQLADALLAQRDWAQAEPLLRG--------------LLAA 381

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           RS   +   D    Y +   + ++          A +  ++    R+A   L      N 
Sbjct: 382 RSPSLSAVRDTATLYENTGRADRIGPLLD-----ALQGRVTGADDRRALDGLRSDLLANE 436

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +A+              +R         ++  +   ++++  +MG            
Sbjct: 437 ARALAD------KGARGPAAQRYEAAVRAAPDAPWTRFALARLYRDMGLPQLGRTVMDDG 490

Query: 352 MKIAPR 357
           +     
Sbjct: 491 LAQRDT 496


>gi|254414647|ref|ZP_05028412.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196178495|gb|EDX73494.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 234

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q+     E+S AI  L+Q  K+        AI    R L     G    +  D   +L+L
Sbjct: 50  QRQAKQGEYSSAIALLSQAIKHHPT----HAIDYNNRGLIYFQMGQRQKALDDYNRALQL 105

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 A         +  +  KA    EK   +NP
Sbjct: 106 NPELDSAYNNRGNYYAAMGQLAKALADYEKALDLNP 141


>gi|189197921|ref|XP_001935298.1| UDP-N-acetylglucosaminyltransferase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187981246|gb|EDU47872.1| UDP-N-acetylglucosaminyltransferase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1529

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 5/130 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL   +A A   Y  A +  + +L +      A+ +L      +     A+ Y  +A+ +
Sbjct: 414 LLGGCLAYALGDYQKAQDWYKHILTLDKDHVEAISNLAATMLALQQKREAENYWRRAVKL 473

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDM 242
            P      E ++      ++   A+  + + ++  K   R  A+    RSLE   ++ + 
Sbjct: 474 RPSYFEAVEHLIGLLCSDQKSREAVQVIEEVERQLKFVKRADAM----RSLEIESERSNS 529

Query: 243 IASYHDAIES 252
             S     E+
Sbjct: 530 DLSESSVSEA 539


>gi|30264465|ref|NP_846842.1| TPR domain-containing protein [Bacillus anthracis str. Ames]
 gi|47529923|ref|YP_021272.1| TPR domain-containing protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187286|ref|YP_030538.1| TPR domain-containing protein [Bacillus anthracis str. Sterne]
 gi|49478625|ref|YP_038445.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|165872749|ref|ZP_02217377.1| TPR domain protein [Bacillus anthracis str. A0488]
 gi|167636509|ref|ZP_02394806.1| TPR domain protein [Bacillus anthracis str. A0442]
 gi|167638676|ref|ZP_02396952.1| TPR domain protein [Bacillus anthracis str. A0193]
 gi|170689640|ref|ZP_02880822.1| TPR domain protein [Bacillus anthracis str. A0465]
 gi|170709400|ref|ZP_02899811.1| TPR domain protein [Bacillus anthracis str. A0389]
 gi|177653264|ref|ZP_02935516.1| TPR domain protein [Bacillus anthracis str. A0174]
 gi|190566840|ref|ZP_03019756.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|196039205|ref|ZP_03106511.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99]
 gi|196044928|ref|ZP_03112162.1| TPR domain protein [Bacillus cereus 03BB108]
 gi|218905590|ref|YP_002453424.1| TPR domain protein [Bacillus cereus AH820]
 gi|225866377|ref|YP_002751755.1| TPR domain protein [Bacillus cereus 03BB102]
 gi|227817174|ref|YP_002817183.1| TPR domain protein [Bacillus anthracis str. CDC 684]
 gi|228917029|ref|ZP_04080589.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228929440|ref|ZP_04092461.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228935716|ref|ZP_04098529.1| TPR domain protein [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228948109|ref|ZP_04110393.1| TPR domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229123936|ref|ZP_04253128.1| TPR domain protein [Bacillus cereus 95/8201]
 gi|229602202|ref|YP_002868682.1| TPR domain protein [Bacillus anthracis str. A0248]
 gi|254684151|ref|ZP_05148011.1| TPR domain protein [Bacillus anthracis str. CNEVA-9066]
 gi|254724678|ref|ZP_05186461.1| TPR domain protein [Bacillus anthracis str. A1055]
 gi|254736498|ref|ZP_05194204.1| TPR domain protein [Bacillus anthracis str. Western North America
           USA6153]
 gi|254741536|ref|ZP_05199223.1| TPR domain protein [Bacillus anthracis str. Kruger B]
 gi|254751365|ref|ZP_05203402.1| TPR domain protein [Bacillus anthracis str. Vollum]
 gi|254757697|ref|ZP_05209724.1| TPR domain protein [Bacillus anthracis str. Australia 94]
 gi|300119217|ref|ZP_07056914.1| TPR domain protein [Bacillus cereus SJ1]
 gi|301055903|ref|YP_003794114.1| tetratricopeptide repeat family protein [Bacillus anthracis CI]
 gi|30259123|gb|AAP28328.1| tetratricopeptide repeat protein [Bacillus anthracis str. Ames]
 gi|47505071|gb|AAT33747.1| TPR domain protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181213|gb|AAT56589.1| TPR domain protein [Bacillus anthracis str. Sterne]
 gi|49330181|gb|AAT60827.1| TPR domain protein (tetratricopeptide repeat family protein)
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|164711525|gb|EDR17074.1| TPR domain protein [Bacillus anthracis str. A0488]
 gi|167513524|gb|EDR88894.1| TPR domain protein [Bacillus anthracis str. A0193]
 gi|167528102|gb|EDR90899.1| TPR domain protein [Bacillus anthracis str. A0442]
 gi|170125699|gb|EDS94615.1| TPR domain protein [Bacillus anthracis str. A0389]
 gi|170666410|gb|EDT17191.1| TPR domain protein [Bacillus anthracis str. A0465]
 gi|172081546|gb|EDT66618.1| TPR domain protein [Bacillus anthracis str. A0174]
 gi|190561831|gb|EDV15800.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|196024416|gb|EDX63089.1| TPR domain protein [Bacillus cereus 03BB108]
 gi|196029832|gb|EDX68433.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99]
 gi|218539110|gb|ACK91508.1| TPR domain protein [Bacillus cereus AH820]
 gi|225787224|gb|ACO27441.1| tetratricopeptide repeat protein [Bacillus cereus 03BB102]
 gi|227004598|gb|ACP14341.1| tetratricopeptide repeat protein [Bacillus anthracis str. CDC 684]
 gi|228659238|gb|EEL14886.1| TPR domain protein [Bacillus cereus 95/8201]
 gi|228811467|gb|EEM57804.1| TPR domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228823954|gb|EEM69773.1| TPR domain protein [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228830228|gb|EEM75844.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228842636|gb|EEM87724.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|229266610|gb|ACQ48247.1| TPR domain protein [Bacillus anthracis str. A0248]
 gi|298723437|gb|EFI64182.1| TPR domain protein [Bacillus cereus SJ1]
 gi|300378072|gb|ADK06976.1| tetratricopeptide repeat family protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 219

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|85059391|ref|YP_455093.1| hypothetical protein SG1413 [Sodalis glossinidius str. 'morsitans']
 gi|84779911|dbj|BAE74688.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 389

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
               ++Q +    EWS+AI    +  K  KE +R   A      +L+     DM  +   
Sbjct: 143 ALSLLLQIHQATSEWSKAIDVAEKLVKLGKEQHRVEIAHFYCELALQVMGSDDMDRAVAL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNK 275
             +      NS   SI  A+  ++Q  
Sbjct: 203 LKKGAAADKNSARVSIMRARIYMAQQD 229


>gi|110642710|ref|YP_670440.1| hypothetical protein ECP_2550 [Escherichia coli 536]
 gi|191172596|ref|ZP_03034135.1| tetratricopeptide repeat protein [Escherichia coli F11]
 gi|300974184|ref|ZP_07172502.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
 gi|110344302|gb|ABG70539.1| hypothetical protein YphG [Escherichia coli 536]
 gi|190907069|gb|EDV66669.1| tetratricopeptide repeat protein [Escherichia coli F11]
 gi|300308923|gb|EFJ63443.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|315615810|gb|EFU96442.1| tetratricopeptide repeat family protein [Escherichia coli 3431]
          Length = 1088

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 3/115 (2%)

Query: 106 MHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
               + + H+ +         L+       + QY  A E     +    ++    Y L  
Sbjct: 513 ATQALKRAHSLNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 572

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 573 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 627


>gi|309792006|ref|ZP_07686484.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308226000|gb|EFO79750.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 525

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 79/246 (32%), Gaps = 17/246 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             +A  +      Q       ++YL        +  +  A  +    +Q       A Y+
Sbjct: 55  ALIAAYVDGEEQAQIYERERAIIYLYIGNALAFQEDWEAALREYLEAVQTDQQLAEAHYN 114

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G L+ A     + L+ +P+      A+       +       +++    +A 
Sbjct: 115 LGVAFAARGQLDRAVAAFRETLEHNPNLYEAHFAL--GRCYQQIDDAGRAYIHYN--SAC 170

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRK 278
                 A  L    L + + G    +     E+L++    I   S  A  +LIS++++  
Sbjct: 171 NARPQAAEPLYYMGLMHQEHGAHELAQKCFAEALRVEPTFISPDSSAAEDALISRSEEEV 230

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A+      W       ++        E    ++ RA  L +   +   +  ++  +    
Sbjct: 231 AQ------WYYR----LSQALKQQNYEEDAERIYRA--LLQWRAQEYPARYLLGNLLARQ 278

Query: 339 GSIDQA 344
              D+A
Sbjct: 279 RRWDEA 284



 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 53/145 (36%), Gaps = 7/145 (4%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A+ + R RAI+ +      A + D  A+  + +E+++       A      +  ++ +  
Sbjct: 67  AQIYERERAIIYLYIGNALAFQEDWEAALREYLEAVQTDQQLAEAHYNLGVAFAARGQLD 126

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
           +A     +  + NP     H  +   Y  +  ++                ++ E L  + 
Sbjct: 127 RAVAAFRETLEHNPNLYEAHFALGRCYQQI--DDAGRAYIHYNSACNARPQAAEPLYYMG 184

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
            +  E G+ + A      A+++ P 
Sbjct: 185 LMHQEHGAHELAQKCFAEALRVEPT 209


>gi|256021766|ref|ZP_05435631.1| hypothetical protein E4_00210 [Escherichia sp. 4_1_40B]
 gi|301648308|ref|ZP_07248048.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|307139185|ref|ZP_07498541.1| hypothetical protein EcolH7_13803 [Escherichia coli H736]
 gi|331643171|ref|ZP_08344306.1| putative tetratricopeptide repeat protein [Escherichia coli H736]
 gi|301073584|gb|EFK88390.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|331039969|gb|EGI12189.1| putative tetratricopeptide repeat protein [Escherichia coli H736]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 3/115 (2%)

Query: 106 MHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
               + + H+ +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHSLNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632


>gi|304396071|ref|ZP_07377953.1| tetratricopeptide repeat protein [Pantoea sp. aB]
 gi|304356440|gb|EFM20805.1| tetratricopeptide repeat protein [Pantoea sp. aB]
          Length = 389

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 41/194 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153
             +  A ++H  + +  +   E    LL VQ      +A   Y+ A +  + +     T 
Sbjct: 83  GEVDRAIRIHQALMESASLSYEQ--RLLAVQQLGRDYMAAGFYDRAEDMFKQLT--DETD 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                       R+G                       + ++  +    +W +AI    +
Sbjct: 139 F-----------RVG---------------------ALQQLLLIHQATSDWQQAIEVAER 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
             K  K+  +   A      +L+     D+  +     +      NS   SI   +  + 
Sbjct: 167 LVKLGKDKQKGEIAHFYCELALQAMSSDDLDRAMSLLKKGEAADRNSARISIMMGRIFME 226

Query: 273 QNKKRKAEVILEKI 286
           +    KA   L+++
Sbjct: 227 KEDFTKAVGHLQRV 240


>gi|294507873|ref|YP_003571931.1| Conserved hypothetical protein, containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
 gi|294344201|emb|CBH24979.1| Conserved hypothetical protein, containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
          Length = 639

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 84/241 (34%), Gaps = 15/241 (6%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDIS 184
           Q   + ++Y  A   +E  +  P T    V  L  ++    + G+  +A     +AL ++
Sbjct: 98  QAYESLKRYRDALRLVEERIGSPPT----VSRLAEKARLQYQKGEGEAADATWDRALALA 153

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P+ P     V       +++ +AI  L + +    + +  R  L     L+    G   A
Sbjct: 154 PNEPQTYRTVYNTLAELRQFRKAIAVLQEGRAALDQPDAFRTELAHLYGLD----GQFEA 209

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE-VILEKIWKVNPHPE---IANIYT 300
           +  + +  L    N +       ++ + Q +   A   +L++  + NP  E       + 
Sbjct: 210 AMQEYVAFLAEAPNRLNYVRSRLRTFVEQGQGIAASIQVLQQTVQENPLNEAYRTLLAWL 269

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           H   +N          L+ +     + L   ++ A +      A        +  PR  +
Sbjct: 270 HTEQDNYAAAFDEYRALDRLGDRQGQILFGFARRAADAQRYGVATRACEAIQEQYPRSGV 329

Query: 361 F 361
            
Sbjct: 330 A 330


>gi|294338775|emb|CAZ87109.1| putative UDP-N-ACETYLGLUCOSAMINE--PEPTIDE
           N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT [Thiomonas sp.
           3As]
          Length = 753

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 62/171 (36%), Gaps = 10/171 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+A ++    +G +  +      +L+L  +   A      +L    +  +AE ++ +   
Sbjct: 55  LVAHAVPLHQQGRVGEAAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIA 114

Query: 289 VNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             P       Y        LL       ++      +++ ++ ES   +++     G + 
Sbjct: 115 AQPA---QGAYWNSLGRLLLLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLAGELA 171

Query: 343 QAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           +A      A+++ P   +    LAQ+ +        + ++  +A  A   P
Sbjct: 172 EAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHYQLAASMAPDAP 222


>gi|301105357|ref|XP_002901762.1| CCR4-NOT transcription complex subunit, putative [Phytophthora
           infestans T30-4]
 gi|262099100|gb|EEY57152.1| CCR4-NOT transcription complex subunit, putative [Phytophthora
           infestans T30-4]
          Length = 706

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 6/114 (5%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+ Y  +AL +   A   TE +          + A       ++   + +R RA + +  
Sbjct: 595 ARSYTAEALCMLSRAAEATETL---QSERNLIAMAE---EYAREANIQLSRARAGVHVNN 648

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     +G    +      +++   N   +       L+ +   +KA  +L++ 
Sbjct: 649 ATSLLLQGRSSEAEESVTRAVRENPNCRESLELLVYVLLKKGDTKKAARVLKEA 702


>gi|296134823|ref|YP_003642065.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12]
 gi|295794945|gb|ADG29735.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12]
          Length = 733

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 64/175 (36%), Gaps = 10/175 (5%)

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A  L+A ++    +G +  +      +L+L  +   A      +L    +  +AE ++ 
Sbjct: 31  QAQQLVAHAVPLHQQGRVGEAAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVR 90

Query: 285 KIWKVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           +     P       Y        LL       ++      +++ ++ ES   +++     
Sbjct: 91  QAIAAQPA---QGAYWNSLGRLLLLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLA 147

Query: 339 GSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           G + +A      A+++ P   +    LAQ+ +        + ++  +A  A   P
Sbjct: 148 GELAEAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHYQLAASMAPDAP 202


>gi|239988495|ref|ZP_04709159.1| hypothetical protein SrosN1_14397 [Streptomyces roseosporus NRRL
           11379]
          Length = 341

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 81/265 (30%), Gaps = 13/265 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
              P A         + T  +     +          + + A       + +    E A 
Sbjct: 66  GPRPTAALGLLLTRAELTDRDRAAALVARAWDRFRAGELDAALSDHGRAVAVDPRSERAH 125

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                    +G    A     +A +I+P   W      + Y        A+T L++    
Sbjct: 126 QGRAVILRSLGRHEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRA--- 182

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               + + A+ L +R L     G    +  D   ++ L      A +  ++         
Sbjct: 183 -HALDPSDAVPLGSRGLVRHALGRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPV 241

Query: 278 KAEVILEKIWKVNPHP-----EIANIY-THLLSENTVGKLKRALRLEEINKESVESLVIV 331
            A   L++  ++NP       E   +Y      E  V    RAL L   + E   +    
Sbjct: 242 GALADLDRAEELNPGRAGTEGERGEVYRATGRHEEAVACYGRALAL---DPEYAWAHGSR 298

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356
           +     +G + +A A    A+++ P
Sbjct: 299 ALALEALGRLPEARADLDRALELDP 323


>gi|228960667|ref|ZP_04122312.1| TPR domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228799031|gb|EEM46003.1| TPR domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 219

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   +   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVHYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|148668308|gb|EDL00638.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_b [Mus musculus]
          Length = 760

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 478 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 533

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 534 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 586


>gi|296157410|ref|ZP_06840245.1| glycosyl transferase family 9 [Burkholderia sp. Ch1-1]
 gi|295892182|gb|EFG71965.1| glycosyl transferase family 9 [Burkholderia sp. Ch1-1]
          Length = 601

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 66/206 (32%), Gaps = 15/206 (7%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+     E+ + G L+SA+ +  +AL +              +        A + +++
Sbjct: 20  LTALIDAALEAHQAGRLDSAESFYREALTLDSAHTGALHYFGVLHYQRGAHDIAASLMSR 79

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K     +R+ A     R L  A  G +  +     ++L+L  +   A      +L +Q
Sbjct: 80  ALK----LDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGAALQAQ 135

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVE 326
               +A          NP      +  HL     + KL R    L        ++  S E
Sbjct: 136 GALLEAVEHYRLALASNP----MLLDAHLNLGTALNKLARFDEALACYRHVLSLDPASAE 191

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAM 352
           +           G    A A    A+
Sbjct: 192 AHFSAGNTHQARGDHGAAIASFEQAV 217



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 82/269 (30%), Gaps = 18/269 (6%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQI-----ALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           M      +           L   I     A    + + A       L + +    A++  
Sbjct: 1   MEHQSQPERAHAAPPHTAYLTALIDAALEAHQAGRLDSAESFYREALTLDSAHTGALHYF 60

Query: 161 YFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                + G  + A    ++AL +     A W    +V           A+   +Q  +  
Sbjct: 61  GVLHYQRGAHDIAASLMSRALKLDRHDAACWSNRGLVA--AALGHLDEAMICYDQALQLQ 118

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            ++    A      +L+   +G ++ +      +L      + A +    +L    +  +
Sbjct: 119 PDF--ADAHNNFGAALQ--AQGALLEAVEHYRLALASNPMLLDAHLNLGTALNKLARFDE 174

Query: 279 AEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A      +  ++P    A+      H    +    +    +   +  +  E+ V +  + 
Sbjct: 175 ALACYRHVLSLDPASAEAHFSAGNTHQARGDHGAAIASFEQAVALRADYAEAHVNLGSLI 234

Query: 336 LEMGSIDQAHAK--AMLAMKIAPRKEIFL 362
            ++G    A +     +A+K  P   + L
Sbjct: 235 GKLGDYAGAESHYRRAVALKPIPTHLVCL 263


>gi|283836291|ref|ZP_06356032.1| lipoprotein NlpI [Citrobacter youngae ATCC 29220]
 gi|291067654|gb|EFE05763.1| lipoprotein NlpI [Citrobacter youngae ATCC 29220]
          Length = 294

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 19/218 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIM 261
           +  A    +   +    +N       + R +     G    +  D +   +   N     
Sbjct: 112 FDAAYEAFDSVLELDPTYN----YAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 167

Query: 262 ASICAAKSLISQNKKRKA-----EVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKR-A 314
             +  A+  + + + ++A     E   ++ W  N    I   Y   +SE+T+  +LK  A
Sbjct: 168 LWLYLAEQKLDEKQAKEALKQRFEKSDKEQWGWN----IVEFYLGNISESTLMERLKADA 223

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                + +   E+   + K  L +G +D A A   LA+
Sbjct: 224 TDNTSLAEHLSETNFYLGKYYLSLGDLDNATALFKLAV 261


>gi|253997756|ref|YP_003049819.1| hypothetical protein Msip34_0043 [Methylovorus sp. SIP3-4]
 gi|253984435|gb|ACT49292.1| hypothetical protein Msip34_0043 [Methylovorus sp. SIP3-4]
          Length = 876

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 88/294 (29%), Gaps = 47/294 (15%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ-----IALAERQYNIAH--EK 142
             L+++ A     AR              E L   L  Q     +ALA +Q++ A     
Sbjct: 252 EALIALGAATPRTAR-------------GEALFQQLVYQNGVEDLALAIKQHDNARVDSL 298

Query: 143 LEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
            E +    +      +  + + +        L +AQ     AL + P        +   +
Sbjct: 299 FEQLQPEIVARKDISQLLLVAWHDFKLER--LAAAQDLFATALAMEPQNDNARYGLALVF 356

Query: 199 VLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +    AIT    L        +   N  + L  ++    D    +     A ++  L
Sbjct: 357 AREQNHEEAITVAQGLPANDAGRNDLLLNAYLALAKQAYGQQDSQQTLNYLRQAKQAGAL 416

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA----NIYTHLLSENTVGKL 311
                 AS+  A S        +A  +   +++  P  E A      Y  L   + +  L
Sbjct: 417 -PRY--ASLMEAWSQFGLGNTTQASEVFASLYRAQPDEESAAGVMASYLKLDRADDIAPL 473

Query: 312 KRALRLEEINKES-----------VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                L    K              E+  + +    + G I    A A +A++ 
Sbjct: 474 ATTEPLASQYKHHVAAGLFGQKRFFEARALDADTYGDAGGIAAPQAGAGIALRD 527


>gi|168241280|ref|ZP_02666212.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205339167|gb|EDZ25931.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 389

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
            + + A    + +++        R  AV  L        D  +A  Y  A    +   D 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136

Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242
                   + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM
Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     +      NS   SI   +  +++    KA   L+++   +           L
Sbjct: 197 DRAMAVLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 247

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351
           +SE          +L +  + +      V     +   L +  I +A   +  A      
Sbjct: 248 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 307

Query: 352 -MKIAPRKEIF-LLL 364
            ++  P   +F  L+
Sbjct: 308 QLQRHPTMRVFHKLM 322


>gi|57208423|emb|CAI42112.1| crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [Homo
           sapiens]
          Length = 836

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 648 RAIYELAI 655


>gi|78065635|ref|YP_368404.1| hypothetical protein Bcep18194_A4163 [Burkholderia sp. 383]
 gi|77966380|gb|ABB07760.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 390

 Score = 40.7 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+    K  D       
Sbjct: 84  GETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALG- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W+++I    + +  + K      A      + +   + +  A+   
Sbjct: 143 AQRALLTIYEIEKDWNKSIDTAKRIESMSDKPLGVEIAQFHCELAQDALQRKNAAAAAEQ 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
              +L +   ++ A++ +  +  ++     A    +++   NP       Y  L+++
Sbjct: 203 LRLALTVNPQNVRATVLSGDAAEAEGNHAAAIEHWKRVEAQNP------AYLPLVAD 253


>gi|326385464|ref|ZP_08207103.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326210003|gb|EGD60781.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 677

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 82/290 (28%), Gaps = 19/290 (6%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYSLYFESCRIGD 169
               ++    ++           + A   L        + P       + L   +   GD
Sbjct: 36  RAQPDDPRAAMVLACALRLCGDAHGAVAALDLPVRAAPEDPV--LAGEWGLALVA--AGD 91

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A      A    P      +A+ +   +      A          A          +
Sbjct: 92  HARAIAPLRLATRAQPRLARTWQALARALRMTGAEDEAWHADAGAVAAASVDP------M 145

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A +      G    +       L L  +   A     +      ++ +A V + +   +
Sbjct: 146 LAEAARAMTAGATDKAQALIERYLSLMPDDAAAIRLLGELAWRSGRQDQAIVHVTQAVAL 205

Query: 290 NPHPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            P  E A ++     + ++     +++A  L     +    +++ + I +++G  D A  
Sbjct: 206 APGFEAARVFLARMLVEADRLPEAMEQADILVARAPDEPGLVMLRASILVKLGEQDAARV 265

Query: 347 -KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM-PDPLW 394
               L  +      +FL L  + +   H    +  +  +   A      W
Sbjct: 266 IYEDLIARGTAPAAVFLNLGHVAKTLGHAGKAVEAFRGAIARAPGSGEAW 315


>gi|262197790|ref|YP_003268999.1| hypothetical protein Hoch_4615 [Haliangium ochraceum DSM 14365]
 gi|262081137|gb|ACY17106.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 1402

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 109/332 (32%), Gaps = 41/332 (12%)

Query: 74  HMLHKRNYDKGYKALYT--------GLMSIAAHN-----IPLARKMHSYVSQQHTFHNEY 120
               +    +  + L          G +  A  +           + SY         E 
Sbjct: 385 RYWRRGREAQALEILARVGRRFAGDGAVHTAIADLYTRWGKADLALQSYERLARIEPEEP 444

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
              +   +          A      ++       +A             L+ A R   KA
Sbjct: 445 SHLVNLGEQYHMRGDTKQAMAVWRRIIARKTPANYARLG--EVFAEHNQLDEALRMYEKA 502

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + + P+     +     +   ++W          +  ++  +    +L +  + + ADK 
Sbjct: 503 IQMEPEQAAHYKGRAGVFERRRDW----------QSVSRAVDDWNKVLALLSNKD-ADKP 551

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +    +  LK   +S   ++  AK+   ++  R+   + E  +       +   Y 
Sbjct: 552 ARAEARRRIVSLLKRGPSS---AMSKAKASWQRDFWREPADV-EAGYL------LVEAYL 601

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                N+  +     RL +++ +  E+L +++K+A      D A A      +++P +  
Sbjct: 602 RDNKFNSAER--ELQRLLKLDPKDTEALELLAKVAERTYDYDAAVAHLERLAELSPNRRR 659

Query: 361 --FLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             F  +A+++ A+  + +  L + + AL A P
Sbjct: 660 DYFNRIAELKTADRKDDE-ALEYARRALEASP 690



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 7/157 (4%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLY 161
           A +    + +      E L  L   ++A     Y+ A   LE + +  P  R      + 
Sbjct: 609 AERELQRLLKLDPKDTEALELL--AKVAERTYDYDAAVAHLERLAELSPNRRRDYFNRIA 666

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                    + A  YA +AL+ SP+ P   E + ++YV  + +  A     +      E 
Sbjct: 667 ELKTADRKDDEALEYARRALEASPNDPLAYERLAERYVEMQRFDEA----TEAYAKTIEL 722

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +  +     A +L +    +   +     E L+   +
Sbjct: 723 DPRQFRAYFALALLHTHNHEPERAAELYREVLRRASD 759


>gi|284037111|ref|YP_003387041.1| hypothetical protein Slin_2220 [Spirosoma linguale DSM 74]
 gi|283816404|gb|ADB38242.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 430

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 8/158 (5%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP-ATREFAVYSL 160
           A+ + +    +    +   +Y L+  +   + Q++ A   + + +   P     +    L
Sbjct: 135 AKALQNAQRAEILGVDTPELYTLQGDLLQRQNQFDKAKLYIAKALQMAPYDGEAYFYKGL 194

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              + R GD   A      +L + P        +   Y    + + A+ +  Q  +    
Sbjct: 195 M--AARQGDTIQALALYQHSLRLKPRYLETYNQLASIYRTTGDLNSALVYNGQALRYFPN 252

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             R    L   R L    +G + ++     +++K+   
Sbjct: 253 NPR----LYYGRGLIYHTEGKLDSAIVYYQQTMKVQPG 286



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 14/188 (7%)

Query: 177 ATKALDIS-----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           A +AL ++     P + +   AV+   +     + A+  +++                + 
Sbjct: 70  ALRALTLAINQSSPASAYAKRAVI--LLAMGRLNEALADIDEAISRNDNLGSY----YLT 123

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           R+           +  +A  +  L  ++          L  QN+  KA++ + K  ++ P
Sbjct: 124 RAQVLRALQQPAKALQNAQRAEILGVDTPELYTLQGDLLQRQNQFDKAKLYIAKALQMAP 183

Query: 292 HPEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
           +   A  Y  L      +T+  L        +    +E+   ++ I    G ++ A    
Sbjct: 184 YDGEAYFYKGLMAARQGDTIQALALYQHSLRLKPRYLETYNQLASIYRTTGDLNSALVYN 243

Query: 349 MLAMKIAP 356
             A++  P
Sbjct: 244 GQALRYFP 251


>gi|206890487|ref|YP_002248931.1| TPR repeat [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742425|gb|ACI21482.1| TPR repeat [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 242

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 54/159 (33%), Gaps = 8/159 (5%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI--SP 185
               E+ Y +A+ +  + +   P  ++  ++ L        +   A+    + L +  + 
Sbjct: 44  AYYIEKNYQLAYSEFHKALQIDPDNKDA-LHGLALVHMEFQEYEMAKDLFLRTLSLDNNY 102

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              W    V  Q +       AI    +   N     +++A     + L     G    +
Sbjct: 103 ADAWFNLGVCYQKLNMH--KEAIDAFQKALNNPLFVTQDKAYF--GQGLSLYRVGQYEEA 158

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            +   +++K     I A +  A +    N+  +A   L+
Sbjct: 159 KNAFDKAIKRNVLLIPAHLYLALTYQKLNQYSEAVKTLK 197


>gi|70731837|ref|YP_261579.1| response regulator/TPR domain-containing protein [Pseudomonas
           fluorescens Pf-5]
 gi|68346136|gb|AAY93742.1| response regulator/TPR domain protein [Pseudomonas fluorescens
           Pf-5]
          Length = 534

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     + G +  A+    KAL   P  P + + + +  V   +  RA   L +  + +
Sbjct: 203 GLGRLLFKRGQVGEAKAVYEKALKAFPMMPGLYDGLAEVLVAEGDTQRAQNVLEEAVRLS 262

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAI 250
               R +A LL   ++ N D      +Y  A+
Sbjct: 263 PLAVRRQA-LLGKLAMANEDFDSASRAYRQAV 293



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 3/139 (2%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +    +         +      S+        A +   + L  + +  +A+ + 
Sbjct: 162 RYAPLCLRYRADALRDMHQNEALERLYNSILADRPLPWAYVGLGRLLFKRGQVGEAKAVY 221

Query: 284 EKIWKVNP-HPEIANIYTH-LLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGS 340
           EK  K  P  P + +     L++E    + +        ++  +V    ++ K+A+    
Sbjct: 222 EKALKAFPMMPGLYDGLAEVLVAEGDTQRAQNVLEEAVRLSPLAVRRQALLGKLAMANED 281

Query: 341 IDQAHAKAMLAMKIAPRKE 359
            D A      A+    +  
Sbjct: 282 FDSASRAYRQAVSQGAQSR 300


>gi|325179646|emb|CCA14044.1| hypothetical protein SORBIDRAFT_08g016670 [Albugo laibachii Nc14]
          Length = 1005

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 83/259 (32%), Gaps = 41/259 (15%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQ-----------------QYVLAK 202
            E+   G + +A+    +A + +P++   W+    ++                     + 
Sbjct: 675 KEAWTNGSVENARLILRQAFNANPNSEQIWLAAVKLEWENDEIELARALLAKARAQAPSA 734

Query: 203 E-WSRAI--------------TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           + W ++I                L        E  +     +  +  E  D+ D   +  
Sbjct: 735 QVWMKSILLEREVGAAGSQEEELLKGGVSRFPESPKLHM--MAGQFYEYKDEPDFAEAKQ 792

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSEN 306
                ++ C  SI   I +++         KA  +LE     NP  ++  ++   +  E 
Sbjct: 793 KYRSGIQHCPKSIRLWILSSRLEEKMTGVTKARSVLELARLKNPKNDM--LWLESIRLEA 850

Query: 307 TVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
            VG  K    L     +E  +S +++++         Q  A  +   +      + L +A
Sbjct: 851 RVGNGKGQSILLSKALQECPDSGILLAESIESAPRPHQKRASFIALNRRDNDPSVCLAVA 910

Query: 366 QIEQANSHNTDKILYWTQS 384
           ++         K+  W + 
Sbjct: 911 KLFWQERK-YTKVRKWLER 928


>gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 503

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 8/129 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMML 147
            L+      I  A K++    +    +++    L +LL       + +   A +     +
Sbjct: 379 ALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLS-----EKGEIGEAEKLYREAI 433

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           +I        Y+L       GD++ A++   +A+ I      V   +        +   A
Sbjct: 434 KIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIKIDDKDLDVYNNLAVLLANKGDIDEA 493

Query: 208 ITFLNQKKK 216
                  K+
Sbjct: 494 EKLYKINKR 502



 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 10/190 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156
            I  A K++    +    ++     L      L     + + A +  +  ++I      A
Sbjct: 251 EIDEAEKLYREAIKIDDKNSNTYNNL----ALLLANKGEIDEAEKLYKEAIKIDDKYSKA 306

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             +L       G+++ A++   +A+ I          +        E   A     +  K
Sbjct: 307 YNNLAVLLSEKGEMDEAEKLFREAIKIDDKNSNTYNNLALLLKNKGEIDEAEKLYREAIK 366

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              + +     L    +L  A+KG++  +     E++K+ D +  A    A  L  + + 
Sbjct: 367 IDDKNSNTYNNL----ALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLSEKGEI 422

Query: 277 RKAEVILEKI 286
            +AE +  + 
Sbjct: 423 GEAEKLYREA 432


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 10/166 (6%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALD 182
           LL         Q   A    E +     T    +   L     R G   +A     +   
Sbjct: 15  LLNALA--KAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQA 72

Query: 183 I--SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               P+  W    +V     A ++  A+  L  + ++       R    +  +L  A + 
Sbjct: 73  KGCKPNL-WTYNTLVDCLGKAGQFDEALRLL-AEMRDNGCVPDVRTYNCLISTLGKAGRL 130

Query: 241 DMIASYHDAIESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEK 285
               +    +       +     S+     L    + +KA  +LE+
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYG--LGKVGRSQKAMELLEE 174


>gi|170019168|ref|YP_001724122.1| TPR repeat-containing protein [Escherichia coli ATCC 8739]
 gi|169754096|gb|ACA76795.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli ATCC 8739]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +   +L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQHSLRTCPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|153006532|ref|YP_001380857.1| hypothetical protein Anae109_3694 [Anaeromyxobacter sp. Fw109-5]
 gi|152030105|gb|ABS27873.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 638

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 78/241 (32%), Gaps = 18/241 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R GD   A      A+     +P +  ++ +  +    +  A     +  + A    R  
Sbjct: 57  RAGDPRGAVDALRLAVAHDGTSPELRVSLAEALLELDRFDAAEAEARKALELAGGAGRTA 116

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--------AKSLISQNKKR 277
           +   +  +   A +  +  +  +   +++L  +       A        A   +    + 
Sbjct: 117 SEAHVLLARLAAGRDRIEEATLELRRAVRLEADLAARGERADALPWRLLADLYLDLGDEA 176

Query: 278 KAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLK------RALRLEEINKESVESLVI 330
            A   LE    + PH P  A      L    + + +         R  E++   VE+L +
Sbjct: 177 AAARTLE---DLGPHAPAEAAAGLRELGRALLDRGQPGRAEHGLRRAAELDPAEVEALRL 233

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           ++     +G   +A    +  ++  P     L+      A + + ++   W +    A  
Sbjct: 234 LAAAHEALGRDGEARDDHLAVLRREPDDAASLVALGHLAAQAGDAERAREWFRRHARAAG 293

Query: 391 D 391
           D
Sbjct: 294 D 294


>gi|172060347|ref|YP_001807999.1| cellulose synthase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171992864|gb|ACB63783.1| cellulose synthase operon C domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 1315

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 105/357 (29%), Gaps = 73/357 (20%)

Query: 70  AMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126
           A L      +     D  Y A   GL ++A  ++  A  + +  +Q      + L     
Sbjct: 291 ATLDRQRDAQRRLERDPDYIAQQRGLQALARGDLAGADPLLARAAQARADDADALGG--L 348

Query: 127 VQIALAERQYNIAHEKLEMML---QIPATREFAV------YSLYFE---SCRIGDLNSAQ 174
             + L E +++ A                +   +      + L  +   +   G    A+
Sbjct: 349 GLLRLREGRHDEARALFTRAAARSTDQRGKWQGLARTAQFWGLLAQGRAAASAGRPQDAE 408

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---------------------- 212
           R A  AL + PD+P     +V   +  ++W+RA   L                       
Sbjct: 409 RAARAALAMQPDSPDAKLQLVDALLAQRDWARAEPLLRELLAARSPTLSAVRGTAMLYEN 468

Query: 213 --------------QKKKNAKEWNRN----RAILLIARSLENADKGDMIASYHDAIESLK 254
                         Q +   ++  R     RA LL +++   ADKG+   +      +++
Sbjct: 469 TGRADRVGPLLDALQGRVTGRDDRRALDGLRADLLASQARALADKGERGPAAQRYEAAVR 528

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--------------EIANIYT 300
              ++       A+        +    +++     +  P              +IA    
Sbjct: 529 AAPDAPWTRFALARLYRDMGLPQLGRTVMDDGLAQSDTPEMRYATALYRNSLDDIAGAQA 588

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            L   +   +      L    K   E  +  ++ AL  G      A    A   AP 
Sbjct: 589 ALAGVDDAHRSDGMRALA--RKLDAEGALADARGALGRGDRAAFAASLTHAQTSAPD 643



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 73/281 (25%), Gaps = 36/281 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           + +    + +   A ++ E  +      P TR      L      +G     +      L
Sbjct: 506 QARALADKGERGPAAQRYEAAVRAAPDAPWTRFA----LARLYRDMGLPQLGRTVMDDGL 561

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFL------NQKKKNAKEWNRNRAILLIARSLE 235
             S D P +  A         + + A   L      ++         +  A   +A +  
Sbjct: 562 AQS-DTPEMRYATALYRNSLDDIAGAQAALAGVDDAHRSDGMRALARKLDAEGALADARG 620

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
              +GD  A       +     +            I      +    L      +PH   
Sbjct: 621 ALGRGDRAAFAASLTHAQTSAPDDPDMLAAIGAQWIDAGDPERGLAPLRDWIAAHPHE-- 678

Query: 296 ANIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSK-----------------IALE 337
           A+    L   + +G   R   L    +    E  +  ++                  A+ 
Sbjct: 679 ADTDVRLRYGDLLGSAGRDDALAAWLDALRREPALTAAQTARIEDQSLRLVLRQTDDAIA 738

Query: 338 MGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDK 377
                +A      A +     K   L LA +E+A  H    
Sbjct: 739 RQDYARARTLLDRASEAGRADKRYALELADLERAQGHYDAA 779



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 32/272 (11%)

Query: 148 QIPATREFAVYS--LYFESCRIGDLN----SAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           +        + +  L  ++  + D      +AQRY   A+  +PDAPW   A+ + Y   
Sbjct: 489 RDDRRALDGLRADLLASQARALADKGERGPAAQRY-EAAVRAAPDAPWTRFALARLYRDM 547

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS------YHDAIESLKL 255
                  T ++     +       A  L   SL++        +        D + +L  
Sbjct: 548 GLPQLGRTVMDDGLAQSDTPEMRYATALYRNSLDDIAGAQAALAGVDDAHRSDGMRALAR 607

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSENTVGKLK 312
             +    ++  A+  + +  +      L       P  P++        + + +    L 
Sbjct: 608 KLD-AEGALADARGALGRGDRAAFAASLTHAQTSAPDDPDMLAAIGAQWIDAGDPERGLA 666

Query: 313 RALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
                   +    ++ V +     L     D A A  + A++  P        A+IE  +
Sbjct: 667 PLRDWIAAHPHEADTDVRLRYGDLLGSAGRDDALAAWLDALRREPALTAAQT-ARIEDQS 725

Query: 372 -------------SHNTDKILYWTQSALHAMP 390
                          +  +       A  A  
Sbjct: 726 LRLVLRQTDDAIARQDYARARTLLDRASEAGR 757


>gi|114681189|ref|XP_514541.2| PREDICTED: crooked neck-like protein 1 isoform 4 [Pan troglodytes]
 gi|114681191|ref|XP_001143710.1| PREDICTED: crooked neck-like protein 1 isoform 3 [Pan troglodytes]
          Length = 740

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 373 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 432

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 433 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 492

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 493 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 551

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 552 RAIYELAI 559


>gi|124256489|ref|NP_057736.4| crooked neck-like protein 1 [Homo sapiens]
 gi|147744555|sp|Q9BZJ0|CRNL1_HUMAN RecName: Full=Crooked neck-like protein 1; AltName: Full=Crooked
           neck homolog; Short=hCrn
 gi|57208424|emb|CAI42113.1| crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [Homo
           sapiens]
 gi|162317768|gb|AAI56790.1| Crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
           [synthetic construct]
          Length = 848

 Score = 40.7 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 660 RAIYELAI 667


>gi|229496965|ref|ZP_04390670.1| TPR domain protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316067|gb|EEN81995.1| TPR domain protein [Porphyromonas endodontalis ATCC 35406]
          Length = 333

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 84/254 (33%), Gaps = 40/254 (15%)

Query: 130 ALAERQYNIAHEKL-EMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
           A    +Y  A +   + +   P   TR    Y L     RIG    A ++    ++  P+
Sbjct: 47  ASKIGEYPFAIKAFGKALELRPEFETR----YYLAETLMRIGATRQALKHLDLLVEEEPN 102

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                    +      ++ +AI  L       +E  ++ A+L    +     + +   + 
Sbjct: 103 HLTTRIYRAKAEYEEGQYDKAIEDLKTALALTEE-EKDLALLHRLLAANYLAQKEWQNAV 161

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
            +A +++ L D    +S+   K+L++  +  +A   L + ++  P               
Sbjct: 162 DEATKAIDLHDEEPTSSLYKTKALVALEQWDEATEFLREAFRAFP--------------- 206

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365
              +                  +  + IAL  G    A      A+   P  ++    L 
Sbjct: 207 EEERF----------------HLYEADIALAKGDYPAAQTAYRTALDKDPFNEDACCGLG 250

Query: 366 QIEQANSHNTDKIL 379
            IE+ + + +  I 
Sbjct: 251 HIEELSGNLSQAIQ 264



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 7/166 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             +   +    E QY+ A E L+    + +           L        +  +A   AT
Sbjct: 106 TRIYRAKAEYEEGQYDKAIEDLKTALALTEEEKDLALLHRLLAANYLAQKEWQNAVDEAT 165

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           KA+D+  + P  +    +  V  ++W  A  FL +  +   E  R      +  +     
Sbjct: 166 KAIDLHDEEPTSSLYKTKALVALEQWDEATEFLREAFRAFPEEER----FHLYEADIALA 221

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           KGD  A+      +L     +  A               +A  +L+
Sbjct: 222 KGDYPAAQTAYRTALDKDPFNEDACCGLGHIEELSGNLSQAIQLLQ 267


>gi|209550939|ref|YP_002282856.1| hypothetical protein Rleg2_3363 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536695|gb|ACI56630.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 289

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 11/137 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q   A   ++ A +     L     R +    L ++     D   A    +KA+ ++P
Sbjct: 151 AGQDDQAFNDFDKAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++P         Y+   +   A    N    +A E N N A     ++L    +GD   +
Sbjct: 204 NSPEPYNGRGISYIALNDNDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259

Query: 246 YHDAIESLKLCDNSIMA 262
                 ++ L      A
Sbjct: 260 ARSYRHAVGLDPKYQPA 276


>gi|158313584|ref|YP_001506092.1| tetratricopeptide domain-containing protein [Frankia sp. EAN1pec]
 gi|158108989|gb|ABW11186.1| Tetratricopeptide domain protein [Frankia sp. EAN1pec]
          Length = 162

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 2/116 (1%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y     G+  +   +   A ++ ++            V     +      QY+ A     
Sbjct: 45  YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALGRAQFEAGQYDDALRTFA 102

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            ++    T ++A + L   + R GDL SA  +   A+ + PD      A+      
Sbjct: 103 WIVDRHPTDDYAQFGLGMAARRTGDLRSAVEHLALAVAMRPDLAHYGVALRGARAA 158


>gi|119630613|gb|EAX10208.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_c [Homo sapiens]
          Length = 836

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 648 RAIYELAI 655


>gi|71748268|ref|XP_823189.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70832857|gb|EAN78361.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 776

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 12/142 (8%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIES 252
                W  A+  L        +  +      + A++++A +    ++GD+ A+     + 
Sbjct: 376 SKGGAWEEALQCLTAAAGIRIDGEKDAVLAQHHAVVVMAYARLVEERGDVAAARSALAKC 435

Query: 253 LKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           ++       A      I AA       +  +A+ +L     ++P PE+ +    L S   
Sbjct: 436 IRHFP-FKTACCPRLWIEAAALEERHGEFVQAQKLLAASLNISPCPEVFDAALRLESNAC 494

Query: 308 VGKLKRALRLEEINKESVESLV 329
                 A    + ++   ES +
Sbjct: 495 AAGEVSAESCVQRSRAIYESAI 516


>gi|332186506|ref|ZP_08388250.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17]
 gi|332013489|gb|EGI55550.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17]
          Length = 574

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 49/190 (25%), Gaps = 5/190 (2%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +   GD  +A++ A  AL             +       + ++A     ++      
Sbjct: 390 LQLAQEEGDRGAARQ-AMAALLDGRALEPGALRRISALADGLDPAQARALAERRIAAGIA 448

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             R+R    +  +    + GD   +     E L      + A    A +         A 
Sbjct: 449 GPRDR----LDLAWAAWNAGDAARTRDWLHEYLVEAPGDLPALRLMADAQARLGGPAAAR 504

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             LE+     P                   L     +        E   + +++ +  G 
Sbjct: 505 PWLERALLQAPRTGRTRAELLDRLGRRAEALALVTAMRRAAPRDAELAALQARLLIAAGQ 564

Query: 341 IDQAHAKAML 350
             +A A    
Sbjct: 565 PGRARAVLTP 574


>gi|329960080|ref|ZP_08298544.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
 gi|328533032|gb|EGF59805.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
          Length = 283

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 13/192 (6%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAVYS- 159
           + + SY    +       + L    + L   +  +A      ++    T       + + 
Sbjct: 78  KALESYTFALNIAPRTVPILLNRAALYLELGKDELARVDY-SLVLDMETGNQEALLMRAY 136

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +Y +     D  +A+    + L ++P +      +         +  A++ LN+   +  
Sbjct: 137 IYRQKR---DYKAARSDYERLLKLNPLSYNGRLGLATLEQKEGNYEEALSLLNRMIADKT 193

Query: 220 EWNRN-----RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +          A+L +AR+    D      +  D  E++ L  +     +   +  +SQ 
Sbjct: 194 DGTAQISTPLYALLYVARAGVEQDMKHTDLALIDLEEAVSLDASQPETYLTRGQIYLSQK 253

Query: 275 KKRKAEVILEKI 286
           KK  A+   EK 
Sbjct: 254 KKDLAKRDFEKA 265


>gi|332142021|ref|YP_004427759.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552043|gb|AEA98761.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 918

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 5/130 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             + + G+   A  + T+ LDI P+   V       + L  E+ +A   +N    +    
Sbjct: 211 QLAMKSGENEKAVAHMTELLDIWPNIAIVQITSAHAFALNGEYDKAFNIINS-VSSEARS 269

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                I       +N ++  + A+     + L + DN I     A  +     +   A  
Sbjct: 270 PWLDKISAEIYLRKNENESALKAAEEAIDKGLSIEDNFI----IAGTAAFKLGRNETAYE 325

Query: 282 ILEKIWKVNP 291
            L+K +  NP
Sbjct: 326 YLKKAYAKNP 335



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 39/215 (18%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQ 148
            GL+S+ + ++  A+             N  +   LL  Q     ++             
Sbjct: 716 EGLVSLRSGDVKSAKSQLEQA----LLINPSVPTALLVAQ---LNKESE----------- 757

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYA------TKALD----ISPDAPWVTEAV---V 195
            P T   A+ S++ +S    DL+    YA       +AL     I  + P    A+    
Sbjct: 758 -PLTGLNALESVFIDSNNEKDLHILAEYAASVGFLDRALAYYDQIVYNFPESHIALNNKA 816

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +  ++++ AI          +                  D+   ++++   +ES   
Sbjct: 817 NILIEKEKFTEAIELAENAYNIRQNPAYLDTKGWAEYKAGQVDRA--VSTFKLLLESQ-- 872

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
                 A++  A+  ++Q  +  A   L++ ++ +
Sbjct: 873 -PRYEAAAVHLAEIYLAQGDRASASK-LKQAFQSS 905


>gi|262304983|gb|ACY45084.1| acetylglucosaminyl-transferase [Eremocosta gigasella]
          Length = 290

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%)

Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +    AL + P        +            A     +  +   E+    A      
Sbjct: 39  AEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAHSNL 94

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +     +G +  +     E++++      A      +L      + A     +  ++NP 
Sbjct: 95  ASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPA 154

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               H  +A+I  H  S N    +       ++  E  ++   ++
Sbjct: 155 FADAHSNLASI--HKDSGNIPEAISSYRTALKLKPEFPDAYCNLA 197



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 66/215 (30%), Gaps = 22/215 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + Q   A E     L++  T   ++ +L       G +  A R   KAL++ P+
Sbjct: 27  ANALKEKGQVPEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  +        + + A+    +  + +  +    A           + GD+  + 
Sbjct: 87  FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301
                ++++      A    A          +A        K+ P  P+    +A+    
Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAISSYRTALKLKPEFPDAYCNLAH-CLQ 201

Query: 302 LLSE--NTVGKLKRA----------LRLEEINKES 324
           ++ +  +   ++K+            RL  ++   
Sbjct: 202 IVCDWTDYEARMKKLVAIVADQLDKNRLPSVHPHH 236


>gi|194451266|ref|YP_002045752.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194409570|gb|ACF69789.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
          Length = 389

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187
            + + A    + +++        R  AV  L        D  +A  Y  A    +   D 
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136

Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242
                   + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM
Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +     +      NS   SI   +  +++    KA   L+++   +           L
Sbjct: 197 DRAMAVLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 247

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351
           +SE          +L +  + +      V     +   L +  I +A   +  A      
Sbjct: 248 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 307

Query: 352 -MKIAPRKEIF-LLL 364
            ++  P   +F  L+
Sbjct: 308 QLQRHPTMRVFHKLM 322


>gi|119630615|gb|EAX10210.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_e [Homo sapiens]
          Length = 848

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 660 RAIYELAI 667


>gi|114681193|ref|XP_001143571.1| PREDICTED: crooked neck-like 1 protein isoform 2 [Pan troglodytes]
          Length = 679

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 312 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 371

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 372 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 431

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 432 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 490

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 491 RAIYELAI 498


>gi|298243358|ref|ZP_06967165.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297556412|gb|EFH90276.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 365

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/270 (10%), Positives = 78/270 (28%), Gaps = 42/270 (15%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS---------- 184
            ++ A      + +     + A+  L      +GD  +    A + L+ +          
Sbjct: 45  NWSQAILYFSELSKQDEEDKEALIGLATALDAMGDYEALLETARRMLETALNSAQGLAFK 104

Query: 185 ------------------------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                                    + P          +L + +  A+    +    A +
Sbjct: 105 ARALQKLERISEATIANDQALLLDTNLPLAWLNRSGLQLLQQRFPEALRSAQRAVTLAPD 164

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                A     + +   +   +  +  +  ++L+L   ++       + L    + ++  
Sbjct: 165 ----DARTWANQGVALLNFNRLNEALENFSKALELDPQNLFVLQMKGEILCRLGRMQEVI 220

Query: 281 VILEKIWKVNP--HPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALE 337
            +  +   ++P   P +      L S      LK  A  L     +++ +     +    
Sbjct: 221 AVTREALLMHPGHTPSLIQAVQALRSLEMYDALKEVARELIAQVPDNLFAWENYMRAWRG 280

Query: 338 MGSIDQAHAKAMLAMKIAPRK-EIFLLLAQ 366
           +G  ++A       +++ P     + L A 
Sbjct: 281 LGLYEEASETLDQLLQLDPDSVRFWTLKAD 310


>gi|296122022|ref|YP_003629800.1| hypothetical protein Plim_1771 [Planctomyces limnophilus DSM 3776]
 gi|296014362|gb|ADG67601.1| Tetratricopeptide TPR_4 [Planctomyces limnophilus DSM 3776]
          Length = 339

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 23/196 (11%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+   +   A            +    + +L       +  + D  A+Y        L  
Sbjct: 135 YLELGQIDEAQLASEAALLRDSQSVSAKMLL----GKIHEKQRDYDAAYEMYRSVSDLWP 190

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------------EIANIYT-HLLS 304
           + + A +  A+  I + +  +A  IL    ++  HP            ++   Y  +   
Sbjct: 191 DDVAAKLAMARVQIERGQADRACPILR---ELMHHPYATLPQQREAEWQLGLAYASNQRW 247

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           E+ V +L++++   E++ +       +++     GS + A      ++ + P       L
Sbjct: 248 EDAVQRLEQSIAERELSADDW---YHLAEAQFHTGSGEHARISVQKSLAMQPDHRGATTL 304

Query: 365 AQIEQANSHNTDKILY 380
           AQ+  AN+        
Sbjct: 305 AQMLSANTGADAIAKG 320


>gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 669

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 8/188 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL  I       A      V      + E L  L    ++     +  A + LE++    
Sbjct: 450 GLAYIKLGAYEDALAAFRKVHAMTPDNAEVLYQL--GNVSDMLGDFPAAIKHLEILHAKV 507

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           +T    +  L      IGD   A  Y  ++  + P    V   +   YV    W +A   
Sbjct: 508 STDPGILARLGAIHAAIGDEAKALHYYQESHRLYPSDMDVLRWLGTFYVKTGNWEKAREL 567

Query: 211 LNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                    K+      +    R + N +  D +A+Y       K+  +++       + 
Sbjct: 568 YQLACMIKPKDVKYRLLVATCLRKVGNVN--DALAAYETI---HKVYPDNVECLRHLCRL 622

Query: 270 LISQNKKR 277
                + +
Sbjct: 623 YGDLGRTK 630


>gi|153006215|ref|YP_001380540.1| hypothetical protein Anae109_3372 [Anaeromyxobacter sp. Fw109-5]
 gi|152029788|gb|ABS27556.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5]
          Length = 4095

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 64/190 (33%), Gaps = 7/190 (3%)

Query: 171  NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            + A+     AL + PD+     A+ + Y  +  W+ A+  L ++ + A        I + 
Sbjct: 3204 DRAEAIFNHALQLEPDSREAVSALGRLYERSGNWNLALDMLRREARIAGGARDAVDIHVR 3263

Query: 231  ARSLENADKGDMIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKV 289
              ++      D   +      +L+L    + A       +   +++ R  E+++E+    
Sbjct: 3264 IGAIHEDMLMDPAGAKEAYARALQLDAGCLPAIRALKGIAERERDRDRYLEMLVEEARYT 3323

Query: 290  NPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                E   +YT          ++     +      +      ++   ++ I + +     
Sbjct: 3324 ADAAEKTRLYTAAGRVYHEERDDRDQAARYYEEALKRTPGHPDAARPLADIYVALSRWPD 3383

Query: 344  AHAKAMLAMK 353
            A       ++
Sbjct: 3384 AERVLDAVVE 3393



 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 85/308 (27%), Gaps = 23/308 (7%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R +            +     L  +I   +  +    + L  +      R  A+ +L+ E
Sbjct: 294 RALERIDRAWAFLPGDPAALDLLARIHGEKGDHRGYSDALARLAAQTRDR-AALVALHLE 352

Query: 164 SCRIG-----DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
             R+      D +SA     KAL + P          + +  A  +  A+  L +    A
Sbjct: 353 MARVDVVRFSDADSALAALGKALALDPACEPAALQAFEHHADAGRFEEALATLERHLAAA 412

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +    +  + + A  L     GD   +      +L+       A+   A  L    +   
Sbjct: 413 QPKAAHAPLRVRAAQLARERLGDPARARRHLEAALRADPGHAPAAAALAPLLEEAEEWSA 472

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLS---------ENTVGKLKRALRLEEINKESVESLV 329
              +LE    +    + A     L                 L+   R   +      +  
Sbjct: 473 LAQVLEASAGLE--RDRAERIRILERLAEVQQEQLGRPKEALRTLSRALALEPSRAATRK 530

Query: 330 IVSKIALEMGSI-DQAHAKAMLAMKIAPRKEI----FLLLAQI-EQANSHNTDKILYWTQ 383
            +   A    +  D   A    A  +             +A+I ++      + +  W  
Sbjct: 531 AMEGAAARADAFLDLVRAYRAAATAVQDDLRAKKTLLRRVAEILDRDLGKPDEAVGAWRA 590

Query: 384 SALHAMPD 391
            A     D
Sbjct: 591 LAELDPED 598



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 65/223 (29%), Gaps = 3/223 (1%)

Query: 150  PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            P  R   +      + R  D ++A     + L   P       A+ + +   + W     
Sbjct: 1174 PELRAAILRERAELADRRKDPDAAAEAWGRLLSACPSDREALSALRRLHRGRERWGELSD 1233

Query: 210  FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
               +  + A +       L    ++     GD   +     +   +      A+    + 
Sbjct: 1234 VCAEIARRAGDPAAREDALREEAAVAEGKLGDPARAAAAWTQVAAIAAEDAEAAAALERL 1293

Query: 270  LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVE 326
                ++  +    LE+       PE A     L     ++  G L+    L   +     
Sbjct: 1294 HERLDRPAELAAALERRLARGFDPEAAARLAELRRTRLDDPAGALELHSELLRRDPARTA 1353

Query: 327  SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            S   +  +A   G + +       A   A  +    + A+ E+
Sbjct: 1354 SRDAIVGLAATAGEVGRDALDLADAALTAAGEHALRVAAREER 1396



 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 83/296 (28%), Gaps = 28/296 (9%)

Query: 95   IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML---QIPA 151
            +A  +   A +    +        E +  L          +     + L   L   + P 
Sbjct: 2100 LALGDPRRAAEAWQRLLDLAPDDREAIAGL--AAALRDGAEPEALAQALRRALSVEESPE 2157

Query: 152  TREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R      L   +  R+GD+  A +   + L+++P        + +  V  + W      
Sbjct: 2158 ARAALHAELAVLQDERLGDVTGAIQSLREVLELAPHDRDALARLDRLCVRTERWVDLADV 2217

Query: 211  LNQKKKNAKEWNRNRAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAA 267
            L ++   A       A++ + + L    +    D   +     E L    +   A     
Sbjct: 2218 LAREIAAAAAAGDEAALVPLRQRLAELSETRLLDREGAVSLYEEVLAARPDHPEAIARLE 2277

Query: 268  KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
              L       +A  ILE  +                  +   +            + +E 
Sbjct: 2278 AILQKDPGNARAAAILEDAY--------------ARGGDVSKQAAVLEVRAAERPDPLER 2323

Query: 328  LVIVSKIA----LEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378
              +  ++A     ++G    A      A +  P        +  + +A+ H  +  
Sbjct: 2324 KALYVQLAELREAQLGDPQLAFLALCKAFREDPADPALRARMETLAEASGHEEELA 2379


>gi|11055967|gb|AAF65571.2|AF255443_1 CGI-201 protein [Homo sapiens]
          Length = 836

 Score = 40.7 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 648 RAIYELAI 655


>gi|323188337|gb|EFZ73629.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G  ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|330927740|ref|XP_003301979.1| hypothetical protein PTT_13645 [Pyrenophora teres f. teres 0-1]
 gi|311322904|gb|EFQ89927.1| hypothetical protein PTT_13645 [Pyrenophora teres f. teres 0-1]
          Length = 1669

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 4/136 (2%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL   +A A   Y  A +  + +L +      A+ +L      +     A+ Y  +A+ +
Sbjct: 553 LLGGCLAYALGDYQKAQDWYKHILTLDKDHVEAISNLAATMLALQQKREAENYWRRAVKL 612

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P      E ++      ++   A+  + + ++  K   R  A+    RSLE   +    
Sbjct: 613 RPSYFEAVEHLIGLLCSDQKSREAVQVIEEVERQLKFAKRADAM----RSLEIESERSTS 668

Query: 244 ASYHDAIESLKLCDNS 259
                ++         
Sbjct: 669 DLSESSVSEASDRPVF 684


>gi|228923147|ref|ZP_04086438.1| TPR domain protein [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836526|gb|EEM81876.1| TPR domain protein [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 219

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFNEAKAVFEQAMQAGL----QSADVTFMVGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|254423262|ref|ZP_05036980.1| peptidase, M48 family [Synechococcus sp. PCC 7335]
 gi|196190751|gb|EDX85715.1| peptidase, M48 family [Synechococcus sp. PCC 7335]
          Length = 473

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 3/99 (3%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            ++  +  +     +       L+     + A    A++L       +A  +LE+   + 
Sbjct: 90  QQAQTSLSRNRQERALVFLKNLLERSPEFVPAYSLLAEALQDTEASDEALAVLEQASTLF 149

Query: 291 PH-PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVE 326
           PH  +IAN     L   +  +     A     +N +  E
Sbjct: 150 PHDADIANARISALRSVDQPLEASIAARLFAMVNPDHPE 188


>gi|149202967|ref|ZP_01879938.1| TPR domain protein [Roseovarius sp. TM1035]
 gi|149143513|gb|EDM31549.1| TPR domain protein [Roseovarius sp. TM1035]
          Length = 595

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 85/285 (29%), Gaps = 27/285 (9%)

Query: 81  YDKGYKALYTGLMS----IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             +G   L  G++S    +   ++  A      V+++    +  + +  +     +   +
Sbjct: 145 EGRGVGDLADGMISAWADLGKGDMTSALARFDDVAKERGLRSFAIYH--KALALASVGDF 202

Query: 137 NIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKAL--DISPDAPWVTE 192
             A +        P   TR   V        ++G+   A          D+ P+      
Sbjct: 203 EGADKVFSGEDDGPIQRTRR-GVIGWSQVLSQLGEHERAVTIIDDTFGTDLDPEIE---- 257

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             ++  +           L     N+     +     + R+L      + +  Y    E 
Sbjct: 258 -TLRARLADG------ESLPFDLVNSASDGISEVFFSLGRALMQEANDEYVLIYARVAEM 310

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVG 309
           +K     + A + AA  L    +   A    +K+ + +P   +A +        +     
Sbjct: 311 IK--PAHVDAVLMAADLLEDLERFDLAIEAFKKVPRDHPSYHLAELGRSDVLRRAGKPDA 368

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            ++   +L +      E  V V  +         A      A+++
Sbjct: 369 AIEVLEQLAKDYPNLAEVHVAVGDLHRSQEDFSAAVPAYDRALEL 413



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 64/169 (37%), Gaps = 1/169 (0%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L+   +     ++++A E  + + +   +   A         R G  ++A     +    
Sbjct: 320 LMAADLLEDLERFDLAIEAFKKVPRDHPSYHLAELGRSDVLRRAGKPDAAIEVLEQLAKD 379

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+   V  AV   +   +++S A+   ++  +  +    ++  +  AR++ +    +  
Sbjct: 380 YPNLAEVHVAVGDLHRSQEDFSAAVPAYDRALELYQSRGNDQWFVRYARAISHERLDNWP 439

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291
            +  D   +L+L  +          +++ ++    +A  ++E+     P
Sbjct: 440 EAEADFRRALELNPDHPQVLNYLGYTMVEKHINLDEALNMIERAVAAQP 488


>gi|85858724|ref|YP_460926.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 563

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 7/170 (4%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              L      AI  L    ++    +     L+   +    +KGD   +     ESL   
Sbjct: 50  LSALDGRLDDAIQELETALRHDPLSSH----LMKELASLYVEKGDFRRAVDLCKESLVHD 105

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKR 313
            + +   +      I+    + A     K+ +++P    A +Y    +  +E     +  
Sbjct: 106 PDDVDVHLILGNLYINMKDYKNAIRSYRKVIEIDPKNTSAYLYLGTLYAETERYDKAVDM 165

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              L + + ++V     ++K+ +E+    +A       + + P  E  L+
Sbjct: 166 YSLLLKNDHDNVMGTYYMAKVLVELRRESEAEQYFKKTLLLKPSLESALI 215


>gi|53804390|ref|YP_113965.1| TPR domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53758151|gb|AAU92442.1| TPR domain protein [Methylococcus capsulatus str. Bath]
          Length = 699

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 85/247 (34%), Gaps = 39/247 (15%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            Q + A + +  +L+        ++     + R G  + A    +KAL+ +P+       
Sbjct: 31  GQIDKAEQAVLTLLERKPNDANILHLAGVVALRKGQNSRAVALISKALEYAPNESLYYFN 90

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARSL-ENADKGDMIASYHDAI 250
           +   Y+       AI    Q  ++A   +  R  A + +  +L E     + +A++   +
Sbjct: 91  LGNAYLA----DGAIDLGIQALQDATRLDPERMEAWMNLGLALVEAKRHPEAVAAFERLL 146

Query: 251 E---SLKLCDNSIMASICAAKSL----------------ISQNKKRKAEVILEKIWKVNP 291
           E     +       A + A   L                +    +R A  ++        
Sbjct: 147 EIDPDHEADVAFASALVGAGIMLKESAMVDRGISVLESKLRDGYERYAAGVI-------- 198

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +A    H    +   +      L E N E +     +++  +++G +++A     L 
Sbjct: 199 ---LARALEHRNRLSEAIRQH--QALLEANPEHIGIRNNLARCLVQLGRVEEARTHYRLC 253

Query: 352 MKIAPRK 358
           +K AP K
Sbjct: 254 VKSAPDK 260


>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
 gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3145

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 11/198 (5%)

Query: 134  RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
               + A    +  + +      A  +L       G+L+ A  Y  +AL+I+P+       
Sbjct: 1143 GDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKGNLSKASNYYQQALEINPNYAEAWCN 1202

Query: 194  VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +    +   +   AI +  +  +   ++    A           +KG++  + +   ++L
Sbjct: 1203 LGVILLKQGQIELAIEYFRKSLELNPDY----AQAYNNLGFVFQEKGNLSKASNYYQQAL 1258

Query: 254  KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308
            ++  N   A       L  Q +   A     K  ++NP     H  +   +      N  
Sbjct: 1259 EINPNYAEAWCNLGVVLRKQGQIELAIEYFRKSLELNPDYAMTHNSLGVTFEE--EGNFT 1316

Query: 309  GKLKRALRLEEINKESVE 326
              +    +  E+     E
Sbjct: 1317 ASIASYQKALELEPNFPE 1334


>gi|317484227|ref|ZP_07943156.1| sigma-54 interaction domain-containing protein [Bilophila
           wadsworthia 3_1_6]
 gi|316924576|gb|EFV45733.1| sigma-54 interaction domain-containing protein [Bilophila
           wadsworthia 3_1_6]
          Length = 1033

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 6/79 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             +         M    +      Y+L      IG + SA+  A  A + +    W+T  
Sbjct: 267 GDWLNRIALFHAMSISQSAMYLGRYTL-----AIGTVESARHSAELAGEKTFSLLWLTHF 321

Query: 194 VVQQYVLAKEWSRAITFLN 212
                +   +W  A+  L+
Sbjct: 322 CF-LLLRKGDWDEALNHLD 339


>gi|301119041|ref|XP_002907248.1| anaphase-promoting complex subunit 7, putative [Phytophthora
           infestans T30-4]
 gi|262105760|gb|EEY63812.1| anaphase-promoting complex subunit 7, putative [Phytophthora
           infestans T30-4]
          Length = 639

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 89/281 (31%), Gaps = 21/281 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L++  +      Y  A E    + ++ P      ++ L  +     D       A     
Sbjct: 288 LVQAHMDTERGNYRAAVESFNALERVFPKN----LHCLLHKGTLESDQEL-LHQAHVTFK 342

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +     +  + + +Y        + T LN   +   + + +RA   +A +  N  KGD 
Sbjct: 343 RARQTDDLNLSFMDRYANCLRRGNSRTNLNDLVQELFKISSSRAESWLAAAYYNDVKGDY 402

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             +   +  ++        A +   + L+   + + A   L+  W           YT +
Sbjct: 403 ETALQFSERAIAEQHRHAPAHLLRGELLLRMQRPQPA---LKAFWTACRLTRSLEAYTGI 459

Query: 303 LS----------ENTVGKLKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLA 351
           ++                L  A  + ++  +  +S V+    +AL     +QA      A
Sbjct: 460 ITSYCDLFAIGVNRYKEALATAKSVVKLYPQKAQSFVLFGSVLALSSEHREQARQALQKA 519

Query: 352 MKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           + + PRK      LA +   + +    I            +
Sbjct: 520 LSMEPRKLSTNFALADLLVEDGNLRGAIDRLQALGERHPRE 560


>gi|254000197|ref|YP_003052260.1| hypothetical protein Msip34_2496 [Methylovorus sp. SIP3-4]
 gi|253986876|gb|ACT51733.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 380

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 14/149 (9%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
           AA +   A  +   +           ++LL V IAL +     A +  +      A +  
Sbjct: 23  AAGDDKQATAICQQILAADA-RQPEAIHLLGV-IALQDGNMEKAAQYFQK-----AIKLN 75

Query: 156 A-----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                   +L   S   G L  A+    KA+ + P        +    +   ++  A   
Sbjct: 76  GKNPQYHSNLGLVSHEQGKLTEAEASYRKAIQLEPRYVDAWYNLHALLIRTGDYLPAREA 135

Query: 211 LNQKKKNAKEWNRNR--AILLIARSLENA 237
           L+   K        R   ++L+  + E  
Sbjct: 136 LDMVLKLNPHDQEARLMMVILLDYAGEKE 164


>gi|218513248|ref|ZP_03510088.1| putative exported protein, TonB-dependent receptor [Rhizobium etli
           8C-3]
          Length = 334

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/121 (9%), Positives = 41/121 (33%), Gaps = 1/121 (0%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +L    ++   D+  M  +  +   ++ L  +  +A +   +  +   ++ K+   L
Sbjct: 6   QDPLLHANLAMLYLDQSRMKEAKREIDTAIALDPSFDIALLVRGRYYLQSGERDKSLEDL 65

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSKIALEMGSID 342
                 NP    + +           ++     L+     ++ +  +   + A+++   D
Sbjct: 66  LAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLDNNDPAISAFRTAVDIDDYD 125

Query: 343 Q 343
            
Sbjct: 126 A 126


>gi|255945219|ref|XP_002563377.1| Pc20g08540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588112|emb|CAP86183.1| Pc20g08540 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 513

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 58/185 (31%), Gaps = 7/185 (3%)

Query: 112 QQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIG 168
                 +  +  L+   +  LA+     A    +  +    T    +           IG
Sbjct: 20  ALQIPSDTPISELISSAKAHLAQGSPRDAVVYFDAAVSRDPTNYITIFQRG--AAYLSIG 77

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAI 227
             + A     + L++ P+         +    +  W  A+  L +  KK+  ++    A 
Sbjct: 78  KNSQASSDFDRVLELKPNFEGALLQRSRLNARSAHWQEALQDLERAGKKSTDDYKELEAA 137

Query: 228 L-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                 +L    +G       +A  ++   + ++      A     + +  +A   L  +
Sbjct: 138 RDAATLALNAEKQGAWETCVSEANVAILKANTALPLRQARAHCHFEKGETEEALSDLAHV 197

Query: 287 WKVNP 291
            +++P
Sbjct: 198 LQMSP 202


>gi|119620977|gb|EAX00572.1| intraflagellar transport 172 homolog (Chlamydomonas), isoform CRA_b
            [Homo sapiens]
          Length = 1711

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 29/196 (14%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
             +S+    H    V+L        E ++  A  +       P         ++  +    
Sbjct: 1093 ELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIR-AGKPKEAVL----MFVHNQ--- 1144

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  +AQR A  A D     P     V+           A+   + +K             
Sbjct: 1145 DWEAAQRVAE-AHD-----PDSVAEVLVGQAR-----GALEEKDFQKAEG---------- 1183

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            L+ R+       +         ++L++C + + + + A +    +   +K    +E   +
Sbjct: 1184 LLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVE 1243

Query: 289  VNPHPEIANIYTHLLS 304
               H E A  Y+  + 
Sbjct: 1244 QARHWEQAGEYSRAVD 1259


>gi|88809358|ref|ZP_01124866.1| hypothetical protein WH7805_09409 [Synechococcus sp. WH 7805]
 gi|88786577|gb|EAR17736.1| hypothetical protein WH7805_09409 [Synechococcus sp. WH 7805]
          Length = 298

 Score = 40.7 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 15/196 (7%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           +  R+G    A R A  A+ + P+   +   + +  + + + + A   L + K       
Sbjct: 59  QLLRLGQPEEASRLAALAVRLQPNDERLWSVLAEAQLRSDQLNDAAGSLAKAKSLNP--- 115

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             +A L  A +           +     E L+L   +  A      + + Q+  R+A   
Sbjct: 116 -GKAGLWFAEASLALRDNRPDDAVPLLDEGLRLDPKNAGAYFDLGNARVMQDDLRQALRA 174

Query: 283 LEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL--- 336
            EK   + P    A            NT   +KR   + +I     E ++ ++  AL   
Sbjct: 175 FEKATSIKPSFWEALNNQALVLFEMGNTSEAIKRWRSVLKIKSN-AEPMLALA-AALNKQ 232

Query: 337 ---EMGSIDQAHAKAM 349
              +  SI+ A     
Sbjct: 233 KPGDTESIELARKALA 248


>gi|294085367|ref|YP_003552127.1| thioredoxin [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664942|gb|ADE40043.1| thioredoxin [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 299

 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 4/123 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E+    D  +A  +  +A++  P++      V++      + + A    +Q    + E+
Sbjct: 134 NEAVDQQDFAAAMTHFQQAMEADPESAEALGGVIRCLTGMGDHASARDVADQ---LSDEY 190

Query: 222 NRNRAILLIARSLENADKGDMIA-SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             N+AI+    +L+ A++    A     A   +     ++ A    A +L +  +   A 
Sbjct: 191 KENKAIITAIAALDLAERAAESAGGLDAARAVVAAEPENLDARQELAMALFAVGENAAAM 250

Query: 281 VIL 283
             L
Sbjct: 251 EQL 253


>gi|218780057|ref|YP_002431375.1| hypothetical protein Dalk_2214 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761441|gb|ACL03907.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 777

 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 57/202 (28%), Gaps = 36/202 (17%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +    D  +A  Y   AL ++P +      +   Y            LN+  +   E 
Sbjct: 598 LLAAAGQDKEAA-SYIQAALSLAPRSVDALNNMASIYFKTGSIEAGANQLNRILEIEPEN 656

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              R  L    +L     G+ + +         +  +   A    A  LIS  +      
Sbjct: 657 IEVRRNL----ALLMLKTGNPLGARDQLKTICYISPDDFDAQYLLATVLISLGR------ 706

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
                        +   YTHL              L EI     E+   ++ +   +G  
Sbjct: 707 -------------LEEAYTHLS-----------KAL-EIKPNHPETHNKMAAVLYNLGYQ 741

Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363
           D A      A+K  P  E   L
Sbjct: 742 DDAIRHLETALKNNPDYENARL 763


>gi|126660968|ref|ZP_01732056.1| MCP methyltransferase, CheR-type [Cyanothece sp. CCY0110]
 gi|126617746|gb|EAZ88527.1| MCP methyltransferase, CheR-type [Cyanothece sp. CCY0110]
          Length = 499

 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           + E  R     +A     + LDI+ +       + Q Y     +  AI +  +  K    
Sbjct: 352 FIEQER---YQAALEQFQQILDINSNHTDAAYWIAQIYANQGRYQDAILYCERLLKIDSL 408

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                 +L    +    + G +  + +   + + L  NS+ A +        +  +R+A 
Sbjct: 409 AIAPHYLL----ARIAEETGKLEEAKYLLKKIIYLDPNSVAAYLDLTHIYTQEGDERRAI 464

Query: 281 VI 282
            +
Sbjct: 465 KM 466


>gi|120612254|ref|YP_971932.1| hypothetical protein Aave_3607 [Acidovorax citrulli AAC00-1]
 gi|120590718|gb|ABM34158.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax citrulli
           AAC00-1]
          Length = 584

 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 16/206 (7%)

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           +A+ Q Y  A + + A   + +   +  +      +   A        GD   +   A  
Sbjct: 156 QAIPQLYGRASDKAAAAAIVEKALADQLQNPATGPLAWTALGRMRLAAGDRKGALEAARN 215

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVG 309
           +L        A++ + + L+   +   AE ++ +     P PEI   Y    L  +    
Sbjct: 216 ALAQEPTLDAAALLSLQ-LVEAGEA-DAEPLVARYMGGKPQPEIRMAYAGVLLNLQRYSE 273

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-------IAPRKE--- 359
              +   L     +  E+ ++ + +AL+   + ++ +      +         PRK    
Sbjct: 274 AGTQLDLLTREAPDMAEAWLLKATLALQSDRLQESESALEQFERLLQSYPPTDPRKAAMG 333

Query: 360 -IFLLLAQIEQANSHNTDKILYWTQS 384
             +LL +QI +    +  +   W   
Sbjct: 334 QAYLLRSQIAEK-RGDLAQAEAWLGK 358



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 56/205 (27%), Gaps = 16/205 (7%)

Query: 103 ARKMHSYVSQQHTFHN-EYLVYLLEVQIALAE-----RQYNIAHEKLEMMLQI----PAT 152
           A K       +      E    LL  Q   A       + N     +  +          
Sbjct: 343 AEKRGDLAQAEAWLGKIENSSELLAAQTRRASLLARQGKLNEGIALIRRLPARNPVEERQ 402

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           +  A   L  ++ +      A     KA+ ++P    +          A + +     L 
Sbjct: 403 KLVAEAQLLRDAKQ---YQQAFEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLR 459

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           Q  +   +++     L  + +        +  +     ++L         +         
Sbjct: 460 QIIEKRPDYHHAYNALGYSLA---ERGIRLQEARQLIQKALTYAPRDPFITDSLGWVEFR 516

Query: 273 QNKKRKAEVILEKIWKVNPHPEIAN 297
                +A  +L + ++  P PEIA 
Sbjct: 517 LGNHAEAARLLNEAFQRQPDPEIAA 541



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 110/326 (33%), Gaps = 42/326 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYV-SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           G M +AA +   A +      +Q+ T     L+ L  V+   A+ +  +A          
Sbjct: 197 GRMRLAAGDRKGALEAARNALAQEPTLDAAALLSLQLVEAGEADAEPLVAR--YMGGKPQ 254

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTEAVVQQYVLA-KEWSRA 207
           P  R  A   +     R  +  +       +A D++    W+ +A +       +E   A
Sbjct: 255 PEIR-MAYAGVLLNLQRYSEAGTQLDLLTREAPDMA--EAWLLKATLALQSDRLQESESA 311

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +    +  ++    +  +A +  A  L  + A+K   +A     +  ++     + A   
Sbjct: 312 LEQFERLLQSYPPTDPRKAAMGQAYLLRSQIAEKRGDLAQAEAWLGKIENSSELLAAQTR 371

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            A  L  Q K  +   ++ ++   NP                  KL    +L    K+  
Sbjct: 372 RASLLARQGKLNEGIALIRRLPARNP-------------VEERQKLVAEAQLLRDAKQYQ 418

Query: 326 ESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ--------------- 369
           ++  +  K  A+  G  D A+ +AMLA K      +  LL QI +               
Sbjct: 419 QAFEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLRQIIEKRPDYHHAYNALGYS 478

Query: 370 -ANSHNT-DKILYWTQSALH-AMPDP 392
            A       +     Q AL  A  DP
Sbjct: 479 LAERGIRLQEARQLIQKALTYAPRDP 504


>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 756

 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 25/235 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A+ +   +  +H    +  +   LL  Q          A E L+ M  +    E 
Sbjct: 373 GKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS--KAGDMAAATEVLKAMATLNVPAEA 430

Query: 156 AVYSLYFESC-RIGDLNSAQRYA------------TKALDISPDAPWVTEAVVQQYVLAK 202
             Y +  E+  +    N A +                 L++ P        +++      
Sbjct: 431 GHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS---AYNPIIEYLCNNG 487

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH-DAIESLKLCDNSIM 261
           + ++A     Q  K         A+  + R   +A +G+  +SY    I S +       
Sbjct: 488 QTAKAEVLFRQLMKRG--VQDQDALNNLIR--GHAKEGNPESSYEILKIMSRRGVPREAN 543

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           A     KS +S+ +   A+  L+ + +    P+ A   + + S    G+++ A R
Sbjct: 544 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFEDGRVQTASR 598


>gi|60417348|emb|CAI59801.1| import receptor subunit TOM34 [Nyctotherus ovalis]
          Length = 105

 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             Y    +W  AI   ++   +      N ++    R+L +    +   +  D+ ES+K+
Sbjct: 12  NAYAQRGDWKEAIELYSKSIGSNP----NESLAYSNRALAHLKLKNYREAAEDSTESIKI 67

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              ++ A    A++     + +KA   L+ I  V P
Sbjct: 68  NPKNLKAYQRRAEACAELGEYKKAYKDLKVILDVEP 103


>gi|27379691|ref|NP_771220.1| hypothetical protein blr4580 [Bradyrhizobium japonicum USDA 110]
 gi|27352843|dbj|BAC49845.1| blr4580 [Bradyrhizobium japonicum USDA 110]
          Length = 389

 Score = 40.7 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 4/176 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R++    +      +  L      +I   +     A   L   + +      A Y+    
Sbjct: 58  RRLAGCSAVLQANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIA 117

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              +GD + A    T+A+ + P+           Y+   +++RA+   +Q  K     +R
Sbjct: 118 YDDLGDRDHAIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIK----LDR 173

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             A+    R     + G+   +  D   ++KL  N   A    A+    + ++ +A
Sbjct: 174 TFALAYFNRGTAYREHGEADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARA 229


>gi|320102705|ref|YP_004178296.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319749987|gb|ADV61747.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 652

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 76/229 (33%), Gaps = 21/229 (9%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                     A +         P     A Y+L     R G  + A+     +LD++PD 
Sbjct: 114 ALQDAGLLPRAIDAFTHAHALRPDDPLIA-YNLGNAWLRRGRHDRAEACYRASLDLNPDQ 172

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P     +        ++  A+    +    A ++   R  L  A      + G  + +  
Sbjct: 173 PLAWCNLGTALQEQGQFEAALAAFTEAIDRAPDYADARYNLGNA----LQELGRHVEAET 228

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
               +L+L  + + A +    +L++Q ++ +AE +  +  +    P+ A  +  L     
Sbjct: 229 AYRRALELRPDFLEARVNLGNALMAQAREAEAEALHAETLQTR--PDSAEAHNGL----A 282

Query: 308 VGKLKR---------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           + +  R               +  +  E+   ++   L +G  ++    
Sbjct: 283 LSRFNRGWYEGVVEHYRAALRLRPDFPEAHKNLALALLTLGEWEEGFEH 331


>gi|307637945|gb|ADN80395.1| Paralysed flagellar protein [Helicobacter pylori 908]
 gi|325996549|gb|ADZ51954.1| Paralysed flagella protein [Helicobacter pylori 2018]
 gi|325998138|gb|ADZ50346.1| Paralysed flagella protein [Helicobacter pylori 2017]
          Length = 801

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 54/242 (22%)

Query: 127 VQIALAERQYNIAHEKLEM-MLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +       Y  A    +  +L+   +R    A   L  E+    DL+SA     +A   
Sbjct: 276 AKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMHLAIEAAEASDLSSASMLFKEAFSN 335

Query: 184 SPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + D    +E  +   +  +  + ++ A   +++  ++  ++           +LE     
Sbjct: 336 AKDKESASEIALNWAEAEINYQNFNNAKYLIDKVVQSNPDY----LSTHSESALELLKLL 391

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
                   AIE               A  L++Q+   KA        K     ++  +Y 
Sbjct: 392 KKNQMNESAIE--------------IAHLLLNQDDDVKA--------KEQALYDLGALYA 429

Query: 301 HLLSENTVGKLKRALR--LEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    ++K      L  +   ++  E         LE  S+ +A  +  L      
Sbjct: 430 ---------RIKDFKNAHLYNLRYLQDHAE---------LERASVVRARDEKALFSMEGN 471

Query: 357 RK 358
            +
Sbjct: 472 TQ 473


>gi|281359483|gb|ADA63503.1| type IV pilus assembly protein [Vibrio vulnificus]
          Length = 244

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 44/185 (23%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A  L   + G MI ++ +  ++L    +   A +  A       +  KAE I +K     
Sbjct: 43  ALGLGYLENGAMIKAHDNLQQALTHAPDYYRAHLSMAHYYERVGENGKAEDIYQK--SAR 100

Query: 291 PHP-------------------EIAN----------------------IYTHLLSENTVG 309
            HP                   + A+                       +  L +   V 
Sbjct: 101 QHPKNGNVLNNYGTFLCKKGEYDKADRLFNRAIEQPYYYLIPASYENAAFCALKAGENVK 160

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIE 368
                 R  + +    +S++ ++K+ ++ G+  QA  + M   +    +     L+  +E
Sbjct: 161 AQTYFTRAIDYDPHRPKSILNLAKLEVDAGNYTQARLRLMRFHQSYGLQIPSLKLMIDLE 220

Query: 369 QANSH 373
               +
Sbjct: 221 DKAGN 225


>gi|260891393|ref|ZP_05902656.1| putative tetratricopeptide repeat-containing domain protein
           [Leptotrichia hofstadii F0254]
 gi|260858776|gb|EEX73276.1| putative tetratricopeptide repeat-containing domain protein
           [Leptotrichia hofstadii F0254]
          Length = 378

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 124 LLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           +L  +IA+ E+  + A + L  M    +    +   +   ++   +  +   A+ Y  K 
Sbjct: 205 ILLAEIAINEKNPSQAEKYLLEMNTAAKGKNGQILGMLGTFY--LQQNNPAKAEEYLAKT 262

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           +   P        ++  Y +    ++ +  +  + K+AK  NR               + 
Sbjct: 263 VAAEPKNTSAKILLLGIYEVQNNTAK-LNSIYSQLKSAKVTNRQIGTYFGGVGAGALAEK 321

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +  +  +  ++         A +   +    Q KK +A  IL++ 
Sbjct: 322 YLQKAITEDKDNA--------AKVVLGQVYAGQGKKAEAVKILQEA 359


>gi|229163344|ref|ZP_04291296.1| TPR domain protein [Bacillus cereus R309803]
 gi|228620125|gb|EEK76999.1| TPR domain protein [Bacillus cereus R309803]
          Length = 222

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD + A  +  +AL++   +  
Sbjct: 14  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSDRAILFYKRALELDDKSAA 73

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 74  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208


>gi|256829247|ref|YP_003157975.1| hypothetical protein Dbac_1465 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578423|gb|ACU89559.1| tetratricopeptide domain-containing protein [Desulfomicrobium
           baculatum DSM 4028]
          Length = 364

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 21/162 (12%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             +  A  +   M        + V      +   G   + Q    +A +I P +P     
Sbjct: 133 GDFLAASRQYRKMGHDLQAAHYLVR-----AATTGTEVTDQGLLAEAREIYPASPEAWLE 187

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IE 251
            +   +  + W   ++ L+Q          +   +L+   L+  D G  + +   A  ++
Sbjct: 188 GIMFQISRESWDDVLSLLDQGL---GSVGTHLGFVLLDPLLDFEDSGAPVKAILPAAYLD 244

Query: 252 SL-----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           +L     +           A   L +  +  +A     K W+
Sbjct: 245 ALLTVIDRHPPELAPLHY-AGCLLRAHGRIEEA-----KTWQ 280


>gi|209551008|ref|YP_002282925.1| hypothetical protein Rleg2_3432 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536764|gb|ACI56699.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 153

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 6/119 (5%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L +I A    +       V    +     L     V+  +  + Y+ A  +L  + +   
Sbjct: 11  LCAICAGFSAVTALPAFAVDNMESTDAPDLT---SVRAKIDAKDYDGALAELRGLAEDN- 66

Query: 152 TREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            ++  VY+L   + R  GD  ++  Y TKAL++ PD     E + + Y+   E ++A  
Sbjct: 67  -QQADVYNLMGYTLRKTGDYKTSLTYYTKALELQPDHKAAREYLGELYIETGEMAKAEE 124


>gi|149177451|ref|ZP_01856055.1| hypothetical protein PM8797T_19156 [Planctomyces maris DSM 8797]
 gi|148843784|gb|EDL58143.1| hypothetical protein PM8797T_19156 [Planctomyces maris DSM 8797]
          Length = 1668

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 95/322 (29%), Gaps = 50/322 (15%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIP 150
           S  +     A ++      +           L  Q +      ++A+   +    ++   
Sbjct: 320 SAGSSEKDQAARLLKQARAELQSGRLDSARALAQQASQL----DVAYRLFDDRPELVLDE 375

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R  +           G+  SAQ  A +          + +A +      ++++ A   
Sbjct: 376 IKRAQSGAGSLA---ATGNTGSAQMTAAEGASKEQATELLRQARLDI--KKRDFAGARQK 430

Query: 211 LNQKKKNAKEW----NRNRAILLIA-RSLENADKGDMIASYHDAIES-----LKLCDNSI 260
           + Q +     +    +R   +L    R  + A     I       ++      +L +   
Sbjct: 431 VQQVQGMKVSYDLFDDRPELVLAAIDRISDEAATISGIKGLQQNQDAIRPRINRLMEQ-- 488

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
                 A+  + Q  K +A ++     K+    E  NI     SE+    +KR       
Sbjct: 489 ------AQVALQQGNKDEALMLASSAQKLA---ETLNIEFASTSESPSAFIKRVGTSSAS 539

Query: 321 ------------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-----LL 363
                       N E    LV  ++  L  G I+ A  KA  A ++     +F      +
Sbjct: 540 KFNPGNTASEKNNPEYARKLVAAARNDLAQGRIEDARQKAEAAQQVDTAYSLFEDRPEQV 599

Query: 364 LAQIEQANSHNTDKILYWTQSA 385
           LA I                +A
Sbjct: 600 LADIRNMAGQPGGLSQEQLYAA 621


>gi|307718491|ref|YP_003874023.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306532216|gb|ADN01750.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 382

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 5/157 (3%)

Query: 130 ALAERQY-NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           AL ++     A  + E +L++     +A+  L     + G+ + A  Y  + L   P   
Sbjct: 39  ALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNN 98

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           +    +   Y   + +  AI    +  K    ++     +L   +      G+   S   
Sbjct: 99  YALFGLADCYKAQERYREAIEIWEKYLK----YDETNVTVLTRVADAYRKTGNFKRSKEL 154

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            ++ L+L + +  A I            R A    E 
Sbjct: 155 YLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEA 191



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 90/270 (33%), Gaps = 24/270 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A   +    + +  +N  L  L       A+ +Y  A E  E  L+   T    +
Sbjct: 78  GEHDRAVSYYRECLRYYPGNNYALFGL--ADCYKAQERYREAIEIWEKYLKYDETNVTVL 135

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +     + G+   ++    K L++    P+    +   +   K++  AI++     + 
Sbjct: 136 TRVADAYRKTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILER 195

Query: 218 AKEWNRNRAILLIA---RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            ++    R +  I    R L+  ++G         +++L+   ++  A    A       
Sbjct: 196 DRDRVDIRVLTAIGNCHRKLKQYERGIPYF-----LKALEKDPHNFYALFGLADCYRGVG 250

Query: 275 KKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
             R++    E+I + +PH ++      + Y HL        L RA               
Sbjct: 251 DHRRSLQYWERILEKDPHNKVILTRTGDAYRHLGD------LARAEEYYHQALNIEFDSY 304

Query: 330 IVSKIAL---EMGSIDQAHAKAMLAMKIAP 356
            +  +A+         +A       +++ P
Sbjct: 305 AILGLAMVHKARKEYREAAESLNTILRLDP 334



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 5/152 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +QY          L+      +A++ L      +GD   + +Y  + L+  P    +   
Sbjct: 216 KQYERGIPYFLKALEKDPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVILTR 275

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               Y    + +RA  + +Q      +     +  ++  ++ +  + +   +       L
Sbjct: 276 TGDAYRHLGDLARAEEYYHQALNIEFD-----SYAILGLAMVHKARKEYREAAESLNTIL 330

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +L   +    I  A   +  N+K +A  +L++
Sbjct: 331 RLDPENPKIYIELADCYLHLNQKEEARSVLKE 362


>gi|289663471|ref|ZP_06485052.1| putative secreted protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 551

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L  A+     
Sbjct: 302 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 361

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 362 ATADDDARRDAYVLEAELHQRANDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 417

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 418 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 477

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 478 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 533

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 534 RLDPDNRAL 542


>gi|218437922|ref|YP_002376251.1| hypothetical protein PCC7424_0927 [Cyanothece sp. PCC 7424]
 gi|218170650|gb|ACK69383.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 291

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 19/205 (9%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +  R     +A   A  +  ++P        +   Y+  +E  + I  LN+        
Sbjct: 52  IQLVRFQQPEAALSRAKLSTQLAPGHFQTWFILGTLYLQQEEVDQGIEALNRAL----TL 107

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKSLISQNKKRKAE 280
                 +          KG+   +  +  + LKL  +   A++     S    +K  +A 
Sbjct: 108 EPKEPGIFFTLGSAYFQKGEYQTAISEIQKGLKLKPD-TPAALFDLGNSYYKLDKHSQAI 166

Query: 281 VILEKI-------WKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
              EK        W     P + NI             LK       I+KE  E  + ++
Sbjct: 167 SSYEKAISLDKEFW-----PALNNIGLIKYEQGKMAEALKYWQSALTIDKEQAEPKLAIA 221

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357
                 G   +    A  A+ +  R
Sbjct: 222 VATYAQGQTQEGLKLAESALLLDSR 246


>gi|118479553|ref|YP_896704.1| TPR repeat-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|118418778|gb|ABK87197.1| TPR-repeat-containing protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 222

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 14  YMQEGNWEEAAKNFTEAIEKNPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 74  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208


>gi|219849523|ref|YP_002463956.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus
           aggregans DSM 9485]
 gi|219543782|gb|ACL25520.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus
           aggregans DSM 9485]
          Length = 383

 Score = 40.7 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372
           S E  +  ++ A + G  D A A     ++I P     + LLAQI + + 
Sbjct: 251 SPEERLRQARAAADHGDWDAAQAYVQQVLEINPLYAPAYYLLAQIAEHHG 300


>gi|327270580|ref|XP_003220067.1| PREDICTED: crooked neck-like protein 1-like [Anolis carolinensis]
          Length = 694

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      +         +        +  + W R   + +  
Sbjct: 328 EEEVKANPHNYDAWFDYLRLVESDADPDAVREVYERAIANVPPIQEKRHWKRYIYLWINY 387

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +       ++L            +  A+  I Q   + A   L    
Sbjct: 388 ALYEELEAKDPERTRQVYQACIELIPHKKFTFAKIWLLYAQFEIRQKSLQLARRALGTSI 447

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++   Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 448 GKCPKNKLFKGYIELELQLREFDRCR-KLYEKFLEFAPENCTSWIKFAELETILGDIDRA 506

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 507 RAIYELAI 514


>gi|302545304|ref|ZP_07297646.1| LuxR-family transcriptional regulator [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302462922|gb|EFL26015.1| LuxR-family transcriptional regulator [Streptomyces himastatinicus
           ATCC 53653]
          Length = 947

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 64/205 (31%), Gaps = 24/205 (11%)

Query: 164 SCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           + R GDL  A   A  AL   P          +  A++Q          A+  L Q   +
Sbjct: 628 ALRQGDLQVAAHQARSALAQIPAPGWGVGLGLLLSALIQAETGMGHHDEAMALLEQPLPD 687

Query: 218 AKE-------WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                     + R R    +A    +A  GD  A    A              + AA++ 
Sbjct: 688 GLFRTVPGMYYLRARGRCHLATGRYHAALGDFQACGELAESWRMDTPLLAPWRLDAAEAW 747

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-----NTVGKLKRALRLEEINKESV 325
           ++     +A  + E+  +             L            +L+R L   +   E +
Sbjct: 748 LALGNPAQARSLAEEQLRR------GAGEARLRGGLLVVLARTDQLRRRLPRLKEAVEVL 801

Query: 326 ESLVIVSKIALEMGSIDQAHAKAML 350
           E      ++A+ +G + +A+     
Sbjct: 802 EGGDDRIQLAIALGELGRAYRALGD 826


>gi|296446847|ref|ZP_06888784.1| cytochrome C family protein [Methylosinus trichosporium OB3b]
 gi|296255618|gb|EFH02708.1| cytochrome C family protein [Methylosinus trichosporium OB3b]
          Length = 650

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A+  +  R    +      A++G  + +      +L+L      A +  A  L S+ + 
Sbjct: 526 AAELVSAERPETHLGVGALRAEQGRPLEAIAAFETALRLDPKFTPARLDLADLLRSEGRD 585

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVI 330
            +AE  L +  + +P     H  +A        E     +L RA+ L     +       
Sbjct: 586 AEAEAPLREAVRRDPADAVAHYALALWLLRQSREMEARSELARAVTLA---PDDP----A 638

Query: 331 VSKI 334
           +++ 
Sbjct: 639 IARA 642


>gi|257464684|ref|ZP_05629055.1| tetratricopeptide repeat protein [Actinobacillus minor 202]
 gi|257450344|gb|EEV24387.1| tetratricopeptide repeat protein [Actinobacillus minor 202]
          Length = 397

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 42/194 (21%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
             +  A ++H  +     ++   + L      +  +A   Y+ A     ++L  P     
Sbjct: 91  GEVDRALRIHQALDSSPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYILLLDEPE---- 146

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                                      ++         +++ Y   KEW +AI    +  
Sbjct: 147 -------------------------FAVN-----SLSQLMEIYQKTKEWKKAINVSEKLL 176

Query: 216 KNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K A E +R          A++++N D+   ++    A+E          AS+      + 
Sbjct: 177 KIAPETDRIPLAHYYCEYAQAVKNEDQNAFLSLLEKALE---HFPQCARASMMLGDYHLE 233

Query: 273 QNKKRKAEVILEKI 286
             + R A    EK+
Sbjct: 234 NQRFRTAADYYEKV 247


>gi|288941666|ref|YP_003443906.1| type 11 methyltransferase [Allochromatium vinosum DSM 180]
 gi|288897038|gb|ADC62874.1| Methyltransferase type 11 [Allochromatium vinosum DSM 180]
          Length = 798

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 73/244 (29%), Gaps = 27/244 (11%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQ----------RYAT 178
                   +    +   +R    + ++  +          D   A             A 
Sbjct: 25  DRQTIGNAMHKKTRSSGSRASGGHGIHRTAPLSTPSLAEQDALVALFNAGRLSEGETMAR 84

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
             +   P A +  +A+    +       A+  L Q      E N   +  L +      D
Sbjct: 85  DVIRRYPKAVFGWKALGTVLLAGDRQREALPALQQAL----ELNPRDSECLNSLGKTLQD 140

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HP 293
              + A+      +L+L  +   A I     L+   +  +A V L++   + P     H 
Sbjct: 141 LVQLDAALDAIEHALRLRPDYGSALINRGNVLVQLGRPDEALVCLDRALALQPDSASAHN 200

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +  +    L   +    L        +     E+   +  +  ++G  +++ A+   A+ 
Sbjct: 201 DRGHALKALGRLDEA--LAAYTHAIALKPGFAEAHHNLGSVLRDLGRFEESLAQYGRALD 258

Query: 354 IAPR 357
           + P 
Sbjct: 259 LKPD 262


>gi|210617786|ref|ZP_03291757.1| hypothetical protein CLONEX_03981 [Clostridium nexile DSM 1787]
 gi|210149149|gb|EEA80158.1| hypothetical protein CLONEX_03981 [Clostridium nexile DSM 1787]
          Length = 440

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +      +  +A E+   + Q   T E    S+   +  I D   A R   + +  +P 
Sbjct: 320 AEAYEKTGKEELALEQYRKVSQWNQTEEL-YRSMVRIAQNI-DEQEALRLCEEGIAANPK 377

Query: 187 APWVTEAVVQQYVLA 201
           +  +   ++Q     
Sbjct: 378 SKELRIQLIQIQCKD 392


>gi|118579511|ref|YP_900761.1| hypothetical protein Ppro_1078 [Pelobacter propionicus DSM 2379]
 gi|118502221|gb|ABK98703.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
          Length = 423

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 97/331 (29%), Gaps = 42/331 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF--------VILSILYFFL 52
           M+ ++R+F ++ +V      +S    D  +  G+   +   +          LS    + 
Sbjct: 1   MINILRFFVLMLVVSLLCGFLSGAGGDERLRRGDEYLQARQWEEAIDEYRAALSERPEWP 60

Query: 53  FAWILLFAVSRFFLSCPAMLFHMLHKRN--YDKGYKALYTGLMSIAAHNIPLARKMHSYV 110
            A   L             +            +G      G++      +  A   +   
Sbjct: 61  AALERLADALMAAGKDGEAISTYERLLRLDESRGSVRYTLGVLHERGGRLKEAESQYREC 120

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
            +Q   +++   +L    I +      +A ++   ++          + L     +    
Sbjct: 121 LRQEPDNDDARRHL--ADIYVLRGNLTLATKEYRQLITRQPANPLFYFRLARVLKKNRRY 178

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRA 226
             A +   +A++++P    +   + + Y        A       L    ++ +  N   +
Sbjct: 179 GEAIKEYRRAIELAPHNAELRRELAELYCKRGMGDGAIGQYRELLRLDNRDTEARNSLIS 238

Query: 227 I---LLIARSLENA---------DKGDM--------------IASYHDAIESLKLCDNSI 260
           +   L    +L            D  D                A+  +  ++L L ++  
Sbjct: 239 LYVKLHRYGALRQLLQEGVERFPDDPDSHFRMGLMHDFAREYQAAISEYRKALALKNDHA 298

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            A     K  +   K  KA+  L    K +P
Sbjct: 299 RALKGLGKIYLKLGKTTKAKECLVAARKADP 329


>gi|116624565|ref|YP_826721.1| peptidase M56, BlaR1 [Candidatus Solibacter usitatus Ellin6076]
 gi|116227727|gb|ABJ86436.1| peptidase M56, BlaR1 [Candidatus Solibacter usitatus Ellin6076]
          Length = 733

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 14/188 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            R G    A +   + +   P      +   ++ Y+     + A     Q  K     + 
Sbjct: 340 LRSGVNELALQKYMEGVAADPAHRATLQKRCIEAYMRMGRKAEAADVNAQLLKE----HP 395

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +    L   +    D+G++ A+     + L+   ++ +A     ++ I+Q     A   +
Sbjct: 396 HDTDGLAFGATILLDQGNVAAAIAQLQQVLERAPDNPVAHFDLGRAYIAQGDLMAARREI 455

Query: 284 EKIWKVNPHPEIANIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           E+   +   P+       L         +    +L R         E ++ L  +   A+
Sbjct: 456 EEAIALR--PDFTRARQALERLSPGAGGDANEDELARLQSESAKAPERLDLLQSLGTAAV 513

Query: 337 EMGSIDQA 344
             G  D A
Sbjct: 514 RAGKFDLA 521



 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 32/188 (17%)

Query: 83  KGYKALYTGLMSIAAH----NIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQY 136
           +  +AL    +S  A        LAR                   LL+     A+   ++
Sbjct: 467 RARQALER--LSPGAGGDANEDELARLQSESAKAPERLD------LLQSLGTAAVRAGKF 518

Query: 137 NIAHEKLEMMLQIPATRE-FAVYSLYFESC-----RIGDLNSAQRYATKALDISPDAPWV 190
           ++A    + +L    TRE   +    +        R GD  +A     KA +++P    V
Sbjct: 519 DLAIYAYQKLL--DRTREPSELRGELYLKLGDAYVRKGDSAAALDAMQKARELAPGNRLV 576

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              ++     A   + A      + +   E      +      L      D +A+    +
Sbjct: 577 LGPLLTLLDGAGRHAEA-----NQLRAGIE-----TVAAHQAELTTQFLNDEVAAAEQRL 626

Query: 251 ESLKLCDN 258
             L+L  +
Sbjct: 627 AKLRLQPS 634



 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINKES 324
           ++ +   +K +A  +  ++ K +PH      +     L   N    + +  ++ E   ++
Sbjct: 372 EAYMRMGRKAEAADVNAQLLKEHPHDTDGLAFGATILLDQGNVAAAIAQLQQVLERAPDN 431

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377
             +   + +  +  G +  A  +   A+ + P        L ++      + ++
Sbjct: 432 PVAHFDLGRAYIAQGDLMAARREIEEAIALRPDFTRARQALERLSPGAGGDANE 485


>gi|70990982|ref|XP_750340.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
 gi|66847972|gb|EAL88302.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
 gi|159130814|gb|EDP55927.1| DnaJ and TPR domain protein [Aspergillus fumigatus A1163]
          Length = 693

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 61/183 (33%), Gaps = 22/183 (12%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
            +S     + +    ++  +      +   A + L+M L +                   
Sbjct: 373 AISMLRENNQDPDALMIRARAYYGLGESEQALKTLKMCLGLDP----------------- 415

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+  A +       ++        A       AK++ +AI   ++  +   +     + +
Sbjct: 416 DMKPAIKMLRTVQKLTRTKEEGNNAF-----KAKDYRKAIELWSEALEVDPQNKDMNSKI 470

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L  R+    +  +   + +D  E+LKL  + + A    AK+        +A    + + +
Sbjct: 471 LQNRAQAYINLKEYENAINDCNEALKLDPSYVKAQKMRAKAYGGAGNWEEAIRDYKAVAE 530

Query: 289 VNP 291
            NP
Sbjct: 531 ANP 533



 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               ++RAI    +  +         +I L  R+         + +  DA  +L+L  ++
Sbjct: 211 KDGNYNRAIEEFTKAIEINPSS----SIYLSNRAAAYLSANRYLEALEDAERALELDPDN 266

Query: 260 IMASICAAKSLISQNKKRKAEVIL 283
                  A+ L +  +  +A  +L
Sbjct: 267 SKIMYRLARILTALGRPSEALEVL 290


>gi|329663840|ref|NP_001192326.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Bos
           taurus]
          Length = 1173

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 99/304 (32%), Gaps = 39/304 (12%)

Query: 91  GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140
           G +     N+  A+K        +    +H  H    + +       ++  A  +++ A 
Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +  + +L+           L   +   G+   A  +  +AL I+ D P     +   ++ 
Sbjct: 518 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 577

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAIESLK 254
            +EW        +  K     +   ++L +             D+         A+   K
Sbjct: 578 KQEWGPGQKKFERILKQPATQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYK 637

Query: 255 -----LCDNSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYT 300
                   N   A    ++ A K    + +      R+A   +  +W       +A+IY 
Sbjct: 638 QVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIYV 692

Query: 301 HLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                 +  ++      +  +   ++ E ++ +++   + G + +     + A  +AP  
Sbjct: 693 EQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSD 750

Query: 359 EIFL 362
            + +
Sbjct: 751 TVLM 754


>gi|308272672|emb|CBX29276.1| hypothetical protein N47_J02570 [uncultured Desulfobacterium sp.]
          Length = 234

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 43/168 (25%), Gaps = 19/168 (11%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             A     +AL   PD              + +   AI    +       +    A+   
Sbjct: 76  EEAINKFKEALIDKPDFVEAWYGWGIALENSGQHEEAIEKFEKAVTYKPNY----AVAWY 131

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
              L   + G    +     +++    +   A  C   +L    K+ +A    EK     
Sbjct: 132 GWGLVLENSGKREEAIEKFDKAVACRPDFAEAWYCWGAALEKSGKREEAIEKFEKAVTYK 191

Query: 291 PHPEIANIYTHLL---------SENTVGKLKRALRLEEINKESVESLV 329
           P+      Y             S      +++     +      E+ +
Sbjct: 192 PN------YAEARCNWGAALEKSGKHEEAIEKFKEATKYKPNYAEARL 233


>gi|294941015|ref|XP_002782970.1| serine/threonine protein phosphatase PfPP5, putative [Perkinsus
           marinus ATCC 50983]
 gi|239895152|gb|EER14766.1| serine/threonine protein phosphatase PfPP5, putative [Perkinsus
           marinus ATCC 50983]
          Length = 335

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 16/203 (7%)

Query: 98  HNIPLARK--MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            ++ LA++  M+  +    +F      Y+      +   +++ A E  +  L     R  
Sbjct: 65  GDV-LAKRYEMNDALKGGASFEKCAKTYVRMATCYVRMNKFDDAIEMYQKALTEDNNRHT 123

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
              +   E   + +     +Y  +A  I+P+          +   A +++ A    ++  
Sbjct: 124 --RTALNECKHMKE-----KYEREAY-INPELADEHRVKGNECFKAADYAGAKKEYDEAI 175

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K       + A L   R+           +  D  E LKL    + A             
Sbjct: 176 KRNP----SDAKLYSNRAAALTKLMAYPDALRDLDECLKLDPKFVKAYSRKGTVHFMMKD 231

Query: 276 KRKAEVILEKIWKVNP-HPEIAN 297
            +KA    EK  +++P H E+ +
Sbjct: 232 YKKALEDYEKGLEIDPSHKELLD 254


>gi|226314849|ref|YP_002774745.1| hypothetical protein BBR47_52640 [Brevibacillus brevis NBRC 100599]
 gi|226097799|dbj|BAH46241.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 547

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 8/181 (4%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L+   ++     +        R+  + ++G  + +     E ++     + A    + + 
Sbjct: 139 LDMPPRHFLPSEKEDVYSKHERARRSLEEGRFLEALDTLKEIVEADPEFLPAWNNLSLAY 198

Query: 271 ISQNKKRKAEVILEKIWKV---NPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESV 325
               +  KA   +E+       N H    +A + +H     TV  L     L+++     
Sbjct: 199 YYAGEFEKAMETIEQTLDKEEGNLHALCNLAVLLSH--HNQTVELLSLIDTLKKVVPFHP 256

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384
           E+   ++     +G  D+A+      ++     E      A I    S   D+ L W Q 
Sbjct: 257 ENTYKLATTMGVLGQHDEAYFHYQRMLRNGRPHEACTYHYAAISAYLSGKKDQALRWWQK 316

Query: 385 A 385
           A
Sbjct: 317 A 317


>gi|221199988|ref|ZP_03573031.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2M]
 gi|221206857|ref|ZP_03579869.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2]
 gi|221211196|ref|ZP_03584175.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD1]
 gi|221168557|gb|EEE01025.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD1]
 gi|221173512|gb|EEE05947.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2]
 gi|221180227|gb|EEE12631.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2M]
          Length = 607

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 16/181 (8%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K+  + + NR    +A + +     D   +      +L++  + + A++     L    
Sbjct: 204 LKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRRALQIRPDYLPAALM----LSQMG 259

Query: 275 KKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
              +A  I      V  +P+     +A    +L  +      K+   + +++ +    L+
Sbjct: 260 PAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLM 319

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQ 383
            ++ I ++   +D A A     +++  ++      + ++ LAQI      N  +   W  
Sbjct: 320 ALALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYLAQI-AIEQGNEAQASQWLD 378

Query: 384 S 384
            
Sbjct: 379 K 379


>gi|206890228|ref|YP_002249703.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742166|gb|ACI21223.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 1056

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 55/186 (29%), Gaps = 26/186 (13%)

Query: 118 NEYLVYLLE--VQIALAERQYNIAHEKLEMMLQ--IPATRE------FAVYSLYFESCRI 167
            + L  +L    + AL+  +Y  A       L+       E       ++  L +     
Sbjct: 142 KDSLTIVLHELGKAALSLGKYEKALSSFNESLKLYREKGDENSVGANLSLIGLVYSKM-- 199

Query: 168 GDLNSAQRYATKALDISPDA--PWVTEAVV----QQYVLAKEWSRAITFLNQK--KKNAK 219
           G L  A  Y  +AL I+     P  T  V+      Y    +  RAI++  +    +   
Sbjct: 200 GQLKKALSYFEEALKIAKKHNDPEGTSIVLREIADIYSDLYQRDRAISYYQEAIEIQKKN 259

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD---NSIMASIC---AAKSLISQ 273
              +   + L        D      +     E+LK+     +    +             
Sbjct: 260 NLRKELGVTLNNLGSMYMDLAQYEKALQSYQEALKIAKEQNDLPTTATLFNNIGHVYAKF 319

Query: 274 NKKRKA 279
            +  KA
Sbjct: 320 GRTDKA 325



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 26/176 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDA---PWVTEAVVQ----QYVLAKEWSRAITFL 211
            L      +GD N A  Y  KA+D++       W+ + +       Y  + ++ +A  +L
Sbjct: 70  GLGSSYEDMGDENKALFYYEKAIDVARKLGNKEWLADDLFLAGSIYYRKSLDYEKAFAYL 129

Query: 212 NQKKKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKL-----CDNSIMASI 264
            + +K   E     ++ ++   L  A    G    +     ESLKL      +NS+ A++
Sbjct: 130 EESRKLFTEIGAKDSLTIVLHELGKAALSLGKYEKALSSFNESLKLYREKGDENSVGANL 189

Query: 265 -CAAKSLISQNKKRKAEVILEKIWKVN-PH----------PEIANIYTHLLSENTV 308
                      + +KA    E+  K+   H           EIA+IY+ L   +  
Sbjct: 190 SLIGLVYSKMGQLKKALSYFEEALKIAKKHNDPEGTSIVLREIADIYSDLYQRDRA 245


>gi|167909465|ref|ZP_02496556.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 112]
          Length = 581

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 26  DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 85

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP +    +      VL  + + A   L
Sbjct: 86  RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 142

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
           +Q+   A   NR +AI+ +                                A + +    
Sbjct: 143 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 202

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L++  + + A++     L       +A  I      V  +P+     
Sbjct: 203 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 258

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 259 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 318

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           A +K      + ++ LAQI   + +N      W      A 
Sbjct: 319 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 358


>gi|167718020|ref|ZP_02401256.1| tetratricopeptide repeat protein [Burkholderia pseudomallei DM98]
          Length = 579

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 24  DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 83

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP +    +      VL  + + A   L
Sbjct: 84  RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 140

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
           +Q+   A   NR +AI+ +                                A + +    
Sbjct: 141 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 200

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L++  + + A++     L       +A  I      V  +P+     
Sbjct: 201 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDSR 256

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 257 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 316

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           A +K      + ++ LAQI   + +N      W      A 
Sbjct: 317 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 356


>gi|119620980|gb|EAX00575.1| intraflagellar transport 172 homolog (Chlamydomonas), isoform CRA_e
            [Homo sapiens]
          Length = 1711

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 29/196 (14%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
             +S+    H    V+L        E ++  A  +       P         ++  +    
Sbjct: 1109 ELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIR-AGKPKEAVL----MFVHNQ--- 1160

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  +AQR A  A D     P     V+           A+   + +K             
Sbjct: 1161 DWEAAQRVAE-AHD-----PDSVAEVLVGQAR-----GALEEKDFQKAEG---------- 1199

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            L+ R+       +         ++L++C + + + + A +    +   +K    +E   +
Sbjct: 1200 LLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVE 1259

Query: 289  VNPHPEIANIYTHLLS 304
               H E A  Y+  + 
Sbjct: 1260 QARHWEQAGEYSRAVD 1275


>gi|12711633|gb|AAK01925.1|AF318303_1 CGI-201 protein, type II [Homo sapiens]
          Length = 848

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 660 RAIYELAI 667


>gi|114321630|ref|YP_743313.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228024|gb|ABI57823.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
          Length = 500

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 7/147 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            +    GD   A +      + +  A        +    +  +++  A   L++ + +  
Sbjct: 298 QQVLAQGDAREAVQRFRARAEQTRGAEQIAARYGLALALIRDRQFDEAEALLSKLEADL- 356

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                +   L+AR       GD   +     ++ +L   +  A    A +L+   +  +A
Sbjct: 357 ---SGQPAWLLARGRLQQRSGDPAQAAATLRKAQELFPGNRAAPTYLADALLDAGQPNEA 413

Query: 280 EVILEKIWKVNP-HPEIANIYTHLLSE 305
             +L +  + +P HPE+        +E
Sbjct: 414 RQVLTRAVRDHPNHPELKRRLAEAANE 440



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 7/144 (4%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              +   A+     + +  +   +  A   +A +L    + D   +    +E+     + 
Sbjct: 302 AQGDAREAVQRFRARAEQTRGAEQIAARYGLALALIRDRQFDEAEALLSKLEA---DLSG 358

Query: 260 IMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
             A + A  +         +A   L K  ++ P    A  Y      +     +    L 
Sbjct: 359 QPAWLLARGRLQQRSGDPAQAAATLRKAQELFPGNRAAPTYLADALLDAGQPNEARQVLT 418

Query: 319 EI---NKESVESLVIVSKIALEMG 339
                +    E    +++ A E G
Sbjct: 419 RAVRDHPNHPELKRRLAEAANEAG 442


>gi|325180925|emb|CCA15335.1| DNA polymerase epsilon subunit putative [Albugo laibachii Nc14]
          Length = 447

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 39/155 (25%), Gaps = 39/155 (25%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           A       +   +I  AR     +S++    N      +    A    +   A    E +
Sbjct: 15  AASQAFAPLHIQDIADARNRLG-ISKELLPENRAKRLHVGALAATLNGKLQEAAALYESI 73

Query: 147 LQIPATREFAVYSLYFESCRIGDL------------------------------------ 170
           L        A+   Y    ++GD                                     
Sbjct: 74  LAHDPLDLLALRCSYDVYLKLGDARNVLGTIARRAPFWSPQIPGYSLLLSMQAFGLHLCG 133

Query: 171 --NSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             + A+  A KAL ++ +  W    ++Q       
Sbjct: 134 KMDEAEVLAEKALALNGNDRWAFFTLLQVLETRGN 168


>gi|330940627|ref|XP_003305973.1| hypothetical protein PTT_18968 [Pyrenophora teres f. teres 0-1]
 gi|311316779|gb|EFQ85945.1| hypothetical protein PTT_18968 [Pyrenophora teres f. teres 0-1]
          Length = 598

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 91/266 (34%), Gaps = 53/266 (19%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+  L   +A+ ER   IA ++   +L    T        +    R     SA   A +A
Sbjct: 210 LIRSLLHHLAIVERPTPIAMQRFLSILDDMKTA-------HIHIIRSE-WTSAIHLAGRA 261

Query: 181 LD-------ISPDAPW--------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +         S    W                  +    V A  +S A +F+ + +    
Sbjct: 262 MGKVGSDELQSALHIWRDMEHRAAIKGRDVTFNVLFNVAVKAGRYSLAESFMKEMQARRL 321

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              R   + L+       +   +  +Y + I + ++ D  ++ ++ A  SLI   +   A
Sbjct: 322 PMFRYWRVTLLYYYGVLQNGNGVRKAYQELIAAGEIVDTVVLNAVIA--SLIRAGEPSAA 379

Query: 280 EVILEK-----IWKVNPHP-------------EIANIYTH----LLSENTVGKLKRALRL 317
           E + E+       +++P P              +  ++      L+ E    +LKR    
Sbjct: 380 EHVFERMKRLHATRISPAPGHRFLNRNWRDRRALGLLFRDESRRLVREGRDDELKRLQDF 439

Query: 318 EEINKESVESLVIVSKIALEMGSIDQ 343
             +  +S    +++   A   G+ID+
Sbjct: 440 APVAPDSRTYGILMRYYATTAGNIDR 465


>gi|301059725|ref|ZP_07200622.1| YcaO-like protein [delta proteobacterium NaphS2]
 gi|300446172|gb|EFK10040.1| YcaO-like protein [delta proteobacterium NaphS2]
          Length = 576

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 20/135 (14%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLA-KEWSRAITF 210
              +  +      +GD  +A  +  +AL + P A  V      +   +   +++ +AIT 
Sbjct: 430 FLGLAHI-----SLGDPQTAMLFLEEALKLDPKAEDVPSIYCYMGICLRDMEQYRKAITV 484

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC----A 266
           L +        +R R  +              +  +  AIE+         AS       
Sbjct: 485 LEK----GARVDRERTDIHNLMGFCYFK----LKEHEKAIEAFHKVLELDPASAIDYANI 536

Query: 267 AKSLISQNKKRKAEV 281
           A +      K  A  
Sbjct: 537 ASNYRDMGNKEMAIR 551


>gi|291567438|dbj|BAI89710.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 260

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 15/190 (7%)

Query: 153 REFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAI 208
           +  A+  L+ ++       D ++A + A +AL + PD     + + +       E + A 
Sbjct: 6   KFLALQ-LHQQAIIYINNRDWDAAIKAAEQALKLYPDLAIACKTLGIAWQC-KGELAEAE 63

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
            +  Q  K    +    + L    + ++  +     +      +LK+  N   A    AK
Sbjct: 64  KWYKQALKIQPHFAEVYSNLGSLYAKQSQWEP----AIIAYQTALKINPNLAGAYRNLAK 119

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKE 323
                           K  K+ P    A+ Y  L +     +     +    +  ++  +
Sbjct: 120 VWTELEDTDNFIKCQYKALKLEPEKGSADDYIKLGNLLLKSRQFTKAIACYRQAIKLYPD 179

Query: 324 SVESLVIVSK 333
           + E+   + +
Sbjct: 180 TSEAYHNLGE 189


>gi|284097303|ref|ZP_06385439.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3]
 gi|283831177|gb|EFC35151.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3]
          Length = 637

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 14/149 (9%)

Query: 129 IALAERQYNIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPD 186
               +  +++       +L+  P                   D + A     K L+  P 
Sbjct: 154 AYDKKGDHDLTIADYTKVLELDPDNMFAYHNRG--RAYINKNDHDKAIEDFNKILEQDPA 211

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA-- 244
              +    V  Y L  ++ +AI    +  +    +    A   + R     D+GD     
Sbjct: 212 NAEIYLYRVLAYSLKGDYDKAIADCTKTLEFKPNY----ANAHLCRGFAYIDQGDQEKFL 267

Query: 245 -SYHDAIESLKLCDNS---IMASICAAKS 269
            ++ D +++ +        + A   A + 
Sbjct: 268 DAFKDFVKANEYDQALKTEVPAIYVAGQI 296


>gi|294909633|ref|XP_002777813.1| hypothetical protein, conserved [Perkinsus marinus ATCC 50983]
 gi|239885775|gb|EER09608.1| hypothetical protein, conserved [Perkinsus marinus ATCC 50983]
          Length = 386

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 6/133 (4%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            + A     AI           E  +  AI+   R+     +   I    DA ++L L  
Sbjct: 99  QMKAGLLDGAIKAYTNALSVHCEDPKLDAIVHSNRAQAYLKQKKYIQCISDAQQALSLDP 158

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRA-L 315
             + A+   A + +      +A        K +P   +++ +    + E    + +R   
Sbjct: 159 TQVKAAYRGAVACMELQLFARAAKFARSGLKTDPDSKDLSKVMGQAIDELKKSRERREKE 218

Query: 316 RLEEINKESVESL 328
           +L+    +  E+ 
Sbjct: 219 KLD----DHGETA 227


>gi|218701061|ref|YP_002408690.1| hypothetical protein ECIAI39_2752 [Escherichia coli IAI39]
 gi|218371047|emb|CAR18874.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 1093

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G  ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|75910999|ref|YP_325295.1| hypothetical protein Ava_4803 [Anabaena variabilis ATCC 29413]
 gi|75704724|gb|ABA24400.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413]
          Length = 340

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 4/158 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               + +   A       L I   R  A Y+L       G L  A      A+++ P   
Sbjct: 98  ALQQQGKKEGAITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAINLEPSKV 157

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +  K     +   A          A +G    +   
Sbjct: 158 NAHHNLAIALQQTGKMEEAIVAYREVLK----LDPQNAAAYSNLGSLMAMQGRPEEAIAA 213

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             ++++    + +A      +L +Q   +KA    ++ 
Sbjct: 214 YTQAVRQDPKNALAYYNLGITLYNQGDLQKASNAFKRA 251


>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
 gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
          Length = 551

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 95/312 (30%), Gaps = 25/312 (8%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
            GL+     +   A  +  Y         +  +   +    L +   + A     E +  
Sbjct: 237 RGLIWSRKGDDSRA--IADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRL 294

Query: 149 IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            P             E  R GD + A    ++ + + P                 E+ RA
Sbjct: 295 DPKMAAAYYDRG--TEWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERA 352

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  LN+        +  +A +   R++  A KGD   +  D  +++ L  N   A     
Sbjct: 353 LADLNRAI----GLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRG 408

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKES 324
                     KAE    K   + P      I+  +    S  T    +   +L+     +
Sbjct: 409 FVNFYSGMLAKAEPDFAKAAALAPDNAYLAIWLDIIDRRSGGTSHLREAIAKLDMSKWPA 468

Query: 325 VESLVIV-----SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
               +++     ++   + G+ D A     +          +   A++++  + N + + 
Sbjct: 469 PVIKMLLGQKTSAETLADAGTGDSAQTSGQVCE-----ANFYT--AELDRLQARNEEAVR 521

Query: 380 YWTQSALHAMPD 391
            +  +A      
Sbjct: 522 LYRLAARTCPKG 533


>gi|46201347|ref|ZP_00055208.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 575

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 60/207 (28%), Gaps = 12/207 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R+G L+ A+  A +A++++P       A+       +++  A   L +  K   
Sbjct: 26  LAVMRVRLGALDGAKAVAERAVELAPGLAEAHAALGLVLSKTRQFPEARASLERAVKLNP 85

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                   L    S+        + +   A   +      + A   A       +    A
Sbjct: 86  GLGMAWMHLGEVLSVLPDQAQAAVDALRRASGLMPRDPRPLNALAGALMGYQRYDD---A 142

Query: 280 EVILEKIWKVNPHPEIAN-------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                    +   P +A+           L   +    + RA  L   +  +++  +  +
Sbjct: 143 IGAYRAATALASEPNLADMLNNMGVALERLERRDEAVPVIRAASLIRPDSAAIQDNLGNA 202

Query: 333 KIALEMGSIDQA--HAKAMLAMKIAPR 357
            +        +A       L  K A  
Sbjct: 203 LLGTARAEEAEACHRRALALGAKGAET 229


>gi|299148226|ref|ZP_07041288.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
 gi|298512987|gb|EFI36874.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
          Length = 320

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 24/223 (10%), Positives = 74/223 (33%), Gaps = 42/223 (18%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +      + R+G  + A +   +AL I  +       + Q Y+   E ++A   L +  
Sbjct: 35  GLR-----AQRMGRPDYAVKCFIEALAIK-EEFETMGYLSQLYIQMGETAKARELLEKMA 88

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               +         +  +     + D  A    A +++ + + +++A            K
Sbjct: 89  AMEPDVTS----TFLTLANVCFIQEDYQAMEEAANKAIAIEEGNVVAHYL-------LGK 137

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            RK +                        ++ +  +    +   +  + +E+ ++ ++  
Sbjct: 138 ARKGQ------------------------DDDLMTIAHLTKAITLKDDFIEARLLRAEAL 173

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDK 377
           + +             +   P +E  +LL  ++++A+  + + 
Sbjct: 174 MNLKQYKDMMEDIDAVLAQNPEEETAMLLRGKVKEADGKDEEA 216


>gi|239906686|ref|YP_002953427.1| hypothetical protein DMR_20500 [Desulfovibrio magneticus RS-1]
 gi|239796552|dbj|BAH75541.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 402

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 39/120 (32%), Gaps = 5/120 (4%)

Query: 164 SCRIGDLN-SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           + +  D +  A +    AL+++P       +         ++  A+  L +  +      
Sbjct: 251 ALKQLDRDDEALQAYEIALNLNPSDAGAWYSKGVILGTHGQYDEALLALEKALQIN--SK 308

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A      +L + ++     +      +L L    I A    A +L    +  +A  +
Sbjct: 309 SPHAWNNFGAALNSLNR--PEEALAALDMALSLDPELIPAQHNRAGALKQLGRLDEALAV 366


>gi|162451294|ref|YP_001613661.1| hypothetical protein sce3022 [Sorangium cellulosum 'So ce 56']
 gi|161161876|emb|CAN93181.1| hypothetical protein sce3022 [Sorangium cellulosum 'So ce 56']
          Length = 496

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 99/352 (28%), Gaps = 85/352 (24%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +    +   A      +       +   + L   Q  +    +  A +  + + +     
Sbjct: 92  AFGERDYEKAISALKRIITMDPDDHAARLNLASAQANM--GDHPAALKSFQAIRKTFQGD 149

Query: 154 E-----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ----------- 197
                      L  +       ++A      AL+  PD     +A+VQ            
Sbjct: 150 ADYHVAVGQVHLAMQKK-----DAALDEMVLALEAKPDCQPALDAMVQLGVLLPIYENPR 204

Query: 198 --------------YVLAKEWSRA----------ITFLNQKKKN--------------AK 219
                           LA +W  A          + +  ++ ++               +
Sbjct: 205 DAASLVYVRADAVLEYLAGQWDAAPRDGAFYLEQLAYHERELRHDVALAAAERAAAASGE 264

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             +R RA L    +L +  + D      +A  +     +S  A +  AK L    +  + 
Sbjct: 265 GASRERAHLARIAALRSLGRTDEALGAAEAFVAT--APSSSGAWVELAKCLSQAGRGAEV 322

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLK---RALRLEEINKESVES---LVIVSK 333
              +E+  + +P  ++A +       +     K       L        ES      +++
Sbjct: 323 PAAVERALESDPG-DLAALSLRFWPSDPADIQKVNEAIPALAAFVAAHPESAGARRSLAR 381

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
             L  G ID A A    A+ +AP                 +  +  YWT+  
Sbjct: 382 AELVAGRIDDALAGFAAAVALAP---------------GDDDLRAEYWTELG 418


>gi|115379807|ref|ZP_01466876.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|115363183|gb|EAU62349.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
          Length = 3238

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 53/188 (28%), Gaps = 10/188 (5%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLY-F 162
            S          +  + +   Q A      +   E L+ + +       R   +  L   
Sbjct: 444 ASLARAVRMMPADAALRVTARQAAEDADSLDSYAEILQELTEEGNVGAARASLLRELADV 503

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           +  ++ D   A       L + P      +++ + +   ++W+     L +    A E  
Sbjct: 504 QEKKLDDKAGAVHALRALLALEPSNADCLKSLQRLHRAGEQWAELAEVLERLASVATEPA 563

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A L  A  L      +   +        +       A++   +      + +     
Sbjct: 564 EQVAYLREAALLHETKLANKERAAATWRTLAERDPLQREAAVALDRLYTDLGRTK----- 618

Query: 283 LEKIWKVN 290
            E  W ++
Sbjct: 619 -ELAWALS 625



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 29/254 (11%)

Query: 163  ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAK 219
             +    D  +A  Y  + L    D+      +   YV  ++W+ A   +  + +K     
Sbjct: 2656 HAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERMLDIVTRKMAEKA 2715

Query: 220  EWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
               ++ A+ L     + R    A+K G    +     +S  L    +         L+  
Sbjct: 2716 IAEKDGALTLELSRQLYRLGYVAEKLGKREKALDAYEKSYGLDARYLATLESYGHLLVQA 2775

Query: 274  NKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLKRALRLEEI 320
             +   A  +L+ I  +  H E             + ++   L   +         +   I
Sbjct: 2776 KRYDDALKVLQAI--LVHHRESLTDLEVVEVYWQLGDVLAALGHSDRAQ--NHFEKALAI 2831

Query: 321  NKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            +     SL  +  +  + G  ++A     + +  +    +  ++L L +I +    +   
Sbjct: 2832 DPGHEPSLRALVSLMDKAGRHEKAAELRQQLVSVVDGEAKARVYLELGEIARDKLKDPYM 2891

Query: 378  ILYWTQSALHAMPD 391
             +     AL   PD
Sbjct: 2892 AIDAFTGALKVKPD 2905



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%)

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  SA+    +AL I P       A+       K+W      L Q+ +  ++       L
Sbjct: 2590 DTGSAKTCYQQALAIDPGHLASIRALKGIQEQEKDWGGYEQTLLQEAQQTEDPQAKARAL 2649

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            L         + D   + H   + LK   +S+ A+   A   +++     AE +L
Sbjct: 2650 LDVAKYHAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERML 2704


>gi|75812660|ref|YP_320278.1| TPR repeat-containing serine/threonin protein kinase [Anabaena
           variabilis ATCC 29413]
 gi|75705416|gb|ABA25089.1| serine/threonine protein kinase with TPR repeats [Anabaena
           variabilis ATCC 29413]
          Length = 707

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 4/88 (4%)

Query: 131 LAERQYNIAH-EKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                   A     + M   P   R + V  L    CR  + + A +   +A +++P   
Sbjct: 373 QLHLDETQAEIAAKKAMQLKPNDGRSYGVLGLVN--CRKSNWSEALKNLEQAANLAPQEV 430

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           W+   +      +  W +A   +N+  +
Sbjct: 431 WIQANLAWALGKSGNWQQAENTVNKALQ 458


>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
 gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 1121

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 4/148 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  +  L +      A Y +   S  +G    A  Y  + L  +   P   + 
Sbjct: 690 GRSEEALECYKKALDLDPQSSNAWYGMASTSNTLGRSEEAVAYYDQLLAANASDPEALQG 749

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +  +    +  AI   N       E        L  R+L  A       +  D    L
Sbjct: 750 KSEALINLGRYEEAIACFN----PLLELEPENIEALDGRALALARSERREEALEDYNRIL 805

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281
           +L  ++  A    A       +  +A  
Sbjct: 806 QLDPSNTKALAEKASLFEELGRYEEAAS 833


>gi|114320028|ref|YP_741711.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226422|gb|ABI56221.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 3/146 (2%)

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138
           R   + ++A      ++ A N   A ++     Q++   +E + + L   I     Q+  
Sbjct: 276 RERQEAFEAHDRAREALRAGNTAEAMRLADQAVQRY--PDEAIFHGLRGDILSVRGQHGQ 333

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A    +  L   +               +G+ + A+R   ++ D+ P+A     A+ +  
Sbjct: 334 AVRAYDRALVRNSEYFAFHLGRGMAHNELGNHSQARRDLERSNDLLPNAV-AHNALGKLA 392

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRN 224
           + A +  RA        ++     R 
Sbjct: 393 LAAGDTDRARGHFTVAAQSNSPEGRE 418


>gi|262171376|ref|ZP_06039054.1| hypothetical protein VII_002196 [Vibrio mimicus MB-451]
 gi|261892452|gb|EEY38438.1| hypothetical protein VII_002196 [Vibrio mimicus MB-451]
          Length = 234

 Score = 40.3 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 37/216 (17%)

Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             A   +P        A+   Y+      +A   L +  ++A  + R++    ++ +   
Sbjct: 21  EAAAQSNPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPSYYRSQ----LSMAHYF 76

Query: 237 ADKGDMIASYHDAIESLKLCD-------NSIMASICAAKSLISQNKKRKAEV-----ILE 284
              G+  ++      +L           N             + N  R+A       ++ 
Sbjct: 77  EAVGESDSARKMYQTALNQHPKNGNVLNNFGTFLCKQGDYETADNYFRRAVAQPYYYLIS 136

Query: 285 KIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI----VSKIALEM 338
             ++       A +       ++      KRA        +   + ++    ++K+ +E 
Sbjct: 137 ASYEN------AALCALKSGQNDKARDYFKRA-------VDHDPTRLLSILQLTKMEIEA 183

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSH 373
           G   QA  + M   +    ++  L LL ++E+   +
Sbjct: 184 GEYTQARIRLMSLNQRYGYQKASLKLLIELEKRAGN 219


>gi|302531550|ref|ZP_07283892.1| predicted protein [Streptomyces sp. AA4]
 gi|302440445|gb|EFL12261.1| predicted protein [Streptomyces sp. AA4]
          Length = 1025

 Score = 40.3 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 32/103 (31%), Gaps = 8/103 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEM 145
           L   L+    H   LA    S    Q     +    LL             + A    E 
Sbjct: 788 LSQLLVLRGRHEEALAAMTESLSLMQTLGATDDYADLLCRRGDSRALRGDLDGAKADYER 847

Query: 146 MLQI------PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +++      P TR      L   + R GDL  A+  A +AL 
Sbjct: 848 TVELAHRTGMPETRASGHVGLSGLARRSGDLAGARALAEQALA 890


>gi|148658680|ref|YP_001278885.1| protein kinase [Roseiflexus sp. RS-1]
 gi|148570790|gb|ABQ92935.1| protein kinase [Roseiflexus sp. RS-1]
          Length = 545

 Score = 40.3 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 78/239 (32%), Gaps = 15/239 (6%)

Query: 58  LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
           L  V    +  P +      +R+  + +K    GL  +       A +      +     
Sbjct: 303 LQRVREALVGAPFVCESSFDQRDEAEQWK--ERGLAHMNMSEYKEAIRCFKRAVELD--Q 358

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNS 172
           ++   + L  +  L    Y+ A + +E  L+   +R      +      F + +      
Sbjct: 359 DQPDSWDLMARCLLKLWMYHEALQSVEEGLRRAVSRTEFGNLYGARGEIFTAMQK--PLE 416

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     KAL   P  P +            +   A     +        + +  I     
Sbjct: 417 ALTAYDKALSYMPSMPALWRGKGALLQHIGDAQSAQECFEKAIA----LDPSDTIAHRQL 472

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               A +G   A+     E+LKL   S+   +   +SL+   +K +A +  EK  K++P
Sbjct: 473 GDLLASRGRWKAAVDSYAEALKLDPRSVEGWVKYGESLLRLGRKEEARIAFEKALKLDP 531


>gi|315187027|gb|EFU20784.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 365

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 5/157 (3%)

Query: 130 ALAERQY-NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           AL ++     A  + E +L++     +A+  L     + G+ + A  Y  + L   P   
Sbjct: 22  ALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNN 81

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           +    +   Y   + +  AI    +  K    ++     +L   +      G+   S   
Sbjct: 82  YALFGLADCYKAQERYREAIEIWEKYLK----YDETNVTVLTRVADAYRKTGNFKRSKEL 137

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            ++ L+L + +  A I            R A    E 
Sbjct: 138 YLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEA 174



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 90/270 (33%), Gaps = 24/270 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A   +    + +  +N  L  L       A+ +Y  A E  E  L+   T    +
Sbjct: 61  GEHDRAVSYYRECLRYYPGNNYALFGL--ADCYKAQERYREAIEIWEKYLKYDETNVTVL 118

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +     + G+   ++    K L++    P+    +   +   K++  AI++     + 
Sbjct: 119 TRVADAYRKTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILER 178

Query: 218 AKEWNRNRAILLIA---RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            ++    R +  I    R L+  ++G         +++L+   ++  A    A       
Sbjct: 179 DRDRVDIRVLTAIGNCHRKLKQYERGIPYF-----LKALEKDPHNFYALFGLADCYRGVG 233

Query: 275 KKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
             R++    E+I + +PH ++      + Y HL        L RA               
Sbjct: 234 DHRRSLQYWERILEKDPHNKVILTRTGDAYRHLGD------LARAEEYYHQALNIEFDSY 287

Query: 330 IVSKIAL---EMGSIDQAHAKAMLAMKIAP 356
            +  +A+         +A       +++ P
Sbjct: 288 AILGLAMVHKARKEYREAAESLNTILRLDP 317



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 5/152 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +QY          L+      +A++ L      +GD   + +Y  + L+  P    +   
Sbjct: 199 KQYERGIPYFLKALEKDPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVILTR 258

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               Y    + +RA  + +Q      +     +  ++  ++ +  + +   +       L
Sbjct: 259 TGDAYRHLGDLARAEEYYHQALNIEFD-----SYAILGLAMVHKARKEYREAAESLNTIL 313

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +L   +    I  A   +  N+K +A  +L++
Sbjct: 314 RLDPENPKIYIELADCYLHLNQKEEARSVLKE 345


>gi|262165791|ref|ZP_06033528.1| hypothetical protein VMA_002240 [Vibrio mimicus VM223]
 gi|262025507|gb|EEY44175.1| hypothetical protein VMA_002240 [Vibrio mimicus VM223]
          Length = 237

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 37/216 (17%)

Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             A   +P        A+   Y+      +A   L +  ++A  + R++    ++ +   
Sbjct: 24  EAAAQSNPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPSYYRSQ----LSMAHYF 79

Query: 237 ADKGDMIASYHDAIESLKLCD-------NSIMASICAAKSLISQNKKRKAEV-----ILE 284
              G+  ++      +L           N             + N  R+A       ++ 
Sbjct: 80  EAVGESDSARKMYQTALNQHPKNGNVLNNFGTFLCKQGDYETADNYFRRAVAQPYYYLIS 139

Query: 285 KIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI----VSKIALEM 338
             ++       A +       ++      KRA        +   + ++    ++K+ +E 
Sbjct: 140 ASYEN------AALCALKSGQNDKARDYFKRA-------VDHDPTRLLSILQLTKMEIEA 186

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSH 373
           G   QA  + M   +    ++  L LL ++E+   +
Sbjct: 187 GEYTQARIRLMSLNQRYGYQKASLKLLIELEKRAGN 222


>gi|258624556|ref|ZP_05719496.1| fimbrial biogenesis and twitching motility protein, putative
           [Vibrio mimicus VM603]
 gi|258583171|gb|EEW07980.1| fimbrial biogenesis and twitching motility protein, putative
           [Vibrio mimicus VM603]
          Length = 237

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 37/216 (17%)

Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             A   +P        A+   Y+      +A   L +  ++A  + R++    ++ +   
Sbjct: 24  EAAAQSNPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPSYYRSQ----LSMAHYF 79

Query: 237 ADKGDMIASYHDAIESLKLCD-------NSIMASICAAKSLISQNKKRKAEV-----ILE 284
              G+  ++      +L           N             + N  R+A       ++ 
Sbjct: 80  EAVGESDSARKMYQTALNQHPKNGNVLNNFGTFLCKQGDYETADNYFRRAVAQPYYYLIS 139

Query: 285 KIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI----VSKIALEM 338
             ++       A +       ++      KRA        +   + ++    ++K+ +E 
Sbjct: 140 ASYEN------AALCALKSGQNDKARDYFKRA-------VDHDPTRLLSILQLTKMEIEA 186

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSH 373
           G   QA  + M   +    ++  L LL ++E+   +
Sbjct: 187 GEYTQARIRLMSLNQRYGYQKASLKLLIELEKRAGN 222


>gi|224535460|ref|ZP_03675999.1| hypothetical protein BACCELL_00323 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522926|gb|EEF92031.1| hypothetical protein BACCELL_00323 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 474

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 7/141 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRN 224
           ++G+ ++A     KA  +   AP      +    V   EW      L +  +  +     
Sbjct: 247 QLGNEDAALECYQKAEQMHGLAPEFVYTYIGLCKVSKGEWEEGYENLEKAIQANEAEETP 306

Query: 225 RAILLIARSLENADKGDMIASYHD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              L    +        M           ++ KL      A +   +  + +    K   
Sbjct: 307 APTLPSLYANAGLCLSKMKKKRKAHQYCKKAQKLEPKDPEAYLIEGRMYVEEGDYEKGIK 366

Query: 282 ILEKIWKVNPHPEIANIYTHL 302
              K     P    A+ +  +
Sbjct: 367 QWAKALNCAP---SADTWNEI 384


>gi|255944335|ref|XP_002562935.1| Pc20g03850 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587670|emb|CAP85714.1| Pc20g03850 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1430

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 31/197 (15%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNR 223
            D   A+R   KA ++S       E + + +  +KEW      A   ++  K      ++
Sbjct: 587 KDKARARRCFHKAFELSTSEIEAAERLARDFADSKEWDLVEAIAQRVVDSGKARPSPGSK 646

Query: 224 NRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R       +L     +K     S      +L+L      + +  A+S     +   A  
Sbjct: 647 RRGFSWPYAALGSVQVNKQQYSKSIVSFQAALRLAATDYHSWVGLAESYHHSGRYNAATK 706

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-ESLVIVSKIALEMGS 340
             E+   + P                         L   +KE +  +  +++ +  E+G 
Sbjct: 707 AFEQAKLLEP------------------------ELSAKDKEHIWFARYMLANVRRELGQ 742

Query: 341 IDQAHAKAMLAMKIAPR 357
            D+A A     +K  P 
Sbjct: 743 YDEAIAAYEDVLKSRPD 759


>gi|209516118|ref|ZP_03264977.1| hypothetical protein BH160DRAFT_1254 [Burkholderia sp. H160]
 gi|209503402|gb|EEA03399.1| hypothetical protein BH160DRAFT_1254 [Burkholderia sp. H160]
          Length = 915

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 1/128 (0%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILL 229
           ++A  +   AL  +P     T  + Q  V  ++W  A   L      A    R  R  + 
Sbjct: 322 DAAAEWFEAALAFAPQDVGATVGLAQVRVAQRDWDGADALLEPAPVAADARARELRGQIA 381

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +AR+ +   +G    S  +   +  L        +    +L +     +AE +    +  
Sbjct: 382 LARADDAYRQGHYAESLRELDLAAGLGVPEASTGVLRGWNLYALRHYAEAERVFRARYDA 441

Query: 290 NPHPEIAN 297
           +   + A 
Sbjct: 442 SHDEDSAE 449


>gi|194861421|ref|XP_001969780.1| GG10284 [Drosophila erecta]
 gi|190661647|gb|EDV58839.1| GG10284 [Drosophila erecta]
          Length = 590

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 11/205 (5%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
            ++L   ++ +    +    NA      RA   I R+              D  E+ +L 
Sbjct: 306 FHLLCGSYTESQQDFDAILANADADPNLRAYAYIKRAALFIQLDQRDKCLADFDEAERLN 365

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKR 313
             +       A+ L+   +   A    EK  ++ P+  IA     Y         G  +R
Sbjct: 366 PENPDVYHQRAQILLLLEQIGPALAEFEKAVRIAPNHAIALVQKCYAEYRLSLLAGDERR 425

Query: 314 ALRL-------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              +        E     VE   +++++  +     QA      AMK+AP     ++   
Sbjct: 426 LESVMHNFQNAIERFPSCVECYSLMAQMLADQQQFSQAQEYYTKAMKLAPTNPALIVHQA 485

Query: 367 IEQAN-SHNTDKILYWTQSALHAMP 390
           I       + +  +     A+   P
Sbjct: 486 IMVLQWRGDIEVAVQLLNKAIEVDP 510



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 6/129 (4%)

Query: 173 AQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           A     KA+ I+P+          A  +  +LA +  R +  +    +NA E   +    
Sbjct: 388 ALAEFEKAVRIAPNHAIALVQKCYAEYRLSLLAGD-ERRLESVMHNFQNAIERFPSCVEC 446

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIW 287
               +   AD+     +     +++KL   +    +  A  ++  +     A  +L K  
Sbjct: 447 YSLMAQMLADQQQFSQAQEYYTKAMKLAPTNPALIVHQAIMVLQWRGDIEVAVQLLNKAI 506

Query: 288 KVNPHPEIA 296
           +V+P  E+A
Sbjct: 507 EVDPKCELA 515


>gi|21241716|ref|NP_641298.1| hypothetical protein XAC0946 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21107084|gb|AAM35834.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 565

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L  A+     
Sbjct: 316 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 375

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 376 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 431

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 432 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 491

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 492 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 547

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 548 RLDPDNRAL 556


>gi|120556583|ref|YP_960934.1| rhomboid family protein [Marinobacter aquaeolei VT8]
 gi|120326432|gb|ABM20747.1| Rhomboid family protein [Marinobacter aquaeolei VT8]
          Length = 483

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 24/152 (15%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS- 184
           +   +L   ++++A  + E + +    R   +  LY  +    DL+S +  A + +  + 
Sbjct: 331 QAMASLGRMEFDLARRQFEALRERYPERPVLLEHLYQLAKLRPDLDSYRMRAEEMMADAI 390

Query: 185 -----------------------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                                  P AP     V+   +   ++  A     + +  A+  
Sbjct: 391 ARRQPEQMVDVWQEYLSKGEAYHPLAPEAHNRVLFASLKRHDFKAAEKAFERMRAKAEPD 450

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL 253
             N A  L+    E          Y   ++  
Sbjct: 451 MVNEACRLLVAEFEKLQMEPKARHYRQLLQVH 482


>gi|75761643|ref|ZP_00741592.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490864|gb|EAO54131.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 222

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 14  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 74  AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208


>gi|312219437|emb|CBX99381.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1999

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 2/129 (1%)

Query: 124  LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            LL   +A A   Y  A +  + +L I      A+ +L      +     A+ Y  +A+ +
Sbjct: 879  LLGGCLAYALGDYQKAQDWYKHILTIDRDHVEAISNLAATYLALQQKRDAEAYWRRAVRL 938

Query: 184  SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             P      E ++           A+  + + ++  +   R  A  L +   E+      +
Sbjct: 939  RPSYFEAVEHLIGLLCSDHRGREAVAIIEEVERKLRFVRREDA--LRSLEAESERSSSTV 996

Query: 244  ASYHDAIES 252
            +   D  E+
Sbjct: 997  SESPDLSEA 1005


>gi|288960921|ref|YP_003451260.1| hypothetical protein AZL_b00530 [Azospirillum sp. B510]
 gi|288913229|dbj|BAI74716.1| hypothetical protein AZL_b00530 [Azospirillum sp. B510]
          Length = 362

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 2/128 (1%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-- 223
           +  D + A     +A+ I P+       +        E+  A+T      +N        
Sbjct: 212 QQNDRHGAIHQFEEAVHIDPNFLSPRLNLGVVNARLGEYDAAVTNFTAVVENPAVAQSPA 271

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            +A  L       A  G +  +Y    ES +   N        A+ L +Q ++ +AE + 
Sbjct: 272 VKAAALSEWGFTLALTGRIDEAYAKFDESTRTDPNFSDVFSSWAEVLSAQGRREEAERMT 331

Query: 284 EKIWKVNP 291
            K  K+ P
Sbjct: 332 AKALKLAP 339


>gi|237757020|ref|ZP_04585474.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690823|gb|EEP59977.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 105

 Score = 40.3 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           +   +  + + + P      +Y L  E  + G    A  Y  K L +  D       + Q
Sbjct: 2   DRIEQLKKALEKDPN-NPLGLYGLALELYKQGLYEDAIIYFKKYLSLYEDQGAAYRTLAQ 60

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            Y+   +  +AI    +  + A+++N    +    + +E  
Sbjct: 61  CYINIGDIEQAIETYERGIEKARKYNHPTMVEEFKQEIERL 101


>gi|322436889|ref|YP_004219101.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321164616|gb|ADW70321.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 502

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 38/214 (17%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKNAKEWNRNR 225
                 A     KA+ ++ D+  V  A+V        +W+RA     Q+ + + E     
Sbjct: 247 RDAALKAYEAVQKAVKLNKDSLPVRTALVNVLTNCTWDWARA----EQECRASVEAGVMD 302

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A ++   S     +G    +   A+ +L+L    I AS                      
Sbjct: 303 ARMIQLYSSLVGCQGRHEEALSLAMHALRLDPE-IPAS---------------------- 339

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                 H +IA  Y +    +    L  A +   +  +   +  ++++I    G  D A 
Sbjct: 340 ------HSQIAQAYLYA--GDYANALNSAKKYLMVRPDFATAHALLTRILAVSGDWDGAL 391

Query: 346 AKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKI 378
            +   A++I+ R      L+A ++     +    
Sbjct: 392 TECQTAVEISGRSPSSLALMAYVQAG-RGDVQAA 424


>gi|253998812|ref|YP_003050875.1| hypothetical protein Msip34_1101 [Methylovorus sp. SIP3-4]
 gi|313200899|ref|YP_004039557.1| hypothetical protein MPQ_1157 [Methylovorus sp. MP688]
 gi|253985491|gb|ACT50348.1| tetratricopeptide repeat protein [Methylovorus sp. SIP3-4]
 gi|312440215|gb|ADQ84321.1| tetratricopeptide repeat protein [Methylovorus sp. MP688]
          Length = 387

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 12/157 (7%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A      +L         +   +  L  +  + G L+ A+             P 
Sbjct: 85  GEVDRAIHLHLNLLDRKELPEQQKLAVMAELAQDYLKAGLLDRAEELFKSLDGSRYKQP- 143

Query: 190 VTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY-- 246
              ++++ YV  +EW RAI      ++ +   + +  A      ++++    D   +   
Sbjct: 144 ALRSLLEIYVREREWERAIKCATELERISGIPFRKEIAQYYCEMAVKSILNNDAHTARYE 203

Query: 247 -HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A+++ K C   + A+I       +    + A  I
Sbjct: 204 LDMALDANKAC---VRATIMLGDMEAAAGDHKAAIAI 237


>gi|168699317|ref|ZP_02731594.1| hypothetical protein GobsU_07347 [Gemmata obscuriglobus UQM 2246]
          Length = 415

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 87/266 (32%), Gaps = 41/266 (15%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL    Y  A E     +++                 +GD   A     +A+ + PD   
Sbjct: 20  ALTAGDYQEAVECYSRAIRLRPGDFAGYRFRAHAYIELGDRVRALNDLDQAIRLKPDDAQ 79

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                 ++     ++ +AIT  ++  K     +  R  L+  R   +AD+GD  A++ D 
Sbjct: 80  TYADRAEELFAQVQYDQAITDCDRALK----LDPKRVALVALRGRCHADRGDSEAAFRDF 135

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
             ++    N               N  R       ++W+   H ++         EN   
Sbjct: 136 AAAIDADPN---------------NAYRY------RLWRAQLHLDL---------ENYTA 165

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-------KEIFL 362
            L  A  +   +     +L + + +    G    A A     +++ P        + +  
Sbjct: 166 ALDDATTVIAADPRHAGALALRATVRQFAGDYAAAVADYTATLEVKPNDPLVHLGRAVCR 225

Query: 363 LLAQIEQANSHNTDKILYWTQSALHA 388
           LL +     + + D+++      + A
Sbjct: 226 LLLRDYVGAAADADEVIRQLPGVVRA 251


>gi|119630611|gb|EAX10206.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 853

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 486 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 545

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 546 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 605

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 606 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 664

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 665 RAIYELAI 672


>gi|33594049|ref|NP_881693.1| hypothetical protein BP3128 [Bordetella pertussis Tohama I]
 gi|33564123|emb|CAE43395.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332383466|gb|AEE68313.1| hypothetical protein BPTD_3090 [Bordetella pertussis CS]
          Length = 628

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 86/271 (31%), Gaps = 48/271 (17%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R+M +              ++L  +IA  + +Y+ A  +L   +  PA R  A      +
Sbjct: 361 RQMATAPGATDAGAAAADAHVLLSRIAEDQGRYDEAIRELGR-IDDPAMRYSAH---MRQ 416

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +                                          A+  +++      E   
Sbjct: 417 AT-------------------------------LRARQGRIDGALAMVDRADPQDDE--- 442

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            R + ++ ++    D   +  +    + + K   +++      A     Q +  + E +L
Sbjct: 443 ERTLGVLTKAQILRDADQVDRAVAILVAADKAMPDTVEIKYELAMLYERQGRIDQLERLL 502

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRL------EEINKESVESLVIVSKIAL 336
            ++  ++  P+ A+ Y + L      + +R    L       E++ E    L  +  +  
Sbjct: 503 REVIALD--PDHAHAY-NALGYTLADRNQRLPEALDLITQALELSPEDPFILDSMGWVKF 559

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            MG    A      A  + P  +I   LA++
Sbjct: 560 RMGEPSAAIEYLKRAYALRPEADIAAHLAEV 590



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 8/265 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            ++  ++A     Y  A   L  + +       A   L F+    G+L  A   A     
Sbjct: 94  RIVGAELAAQRGMYGTAAATLVTLARETGDPRLARRGLEFQ-LAGGNLPGALDAARAWSS 152

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P+    +   +       E S     L    +   +  R++   ++      +   D 
Sbjct: 153 LAPNDIEASSTELALAAANGETSG----LATALRKRIDTARDKPAAIVQAMGVLSRLNDR 208

Query: 243 IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIAN--IY 299
             +     ESL      + A+  A A    +     +A          +P  E A   + 
Sbjct: 209 RLALRILDESLSDSARKLPAAHLALADVAQAAGDYPRAANEAYAALAADPKSEAAAQRVL 268

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +    +      +A      N ++ +  ++++    + G  D A A+     + +P   
Sbjct: 269 EYGAKVDATRAQHQARAFINRNPDARKLRLMLAGQIADGGDYDGALAELQAMSRRSPEDF 328

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384
             + +       +   D+   + Q 
Sbjct: 329 DLMFMQAQLAYKAGRLDQARGYLQQ 353


>gi|47566583|ref|ZP_00237405.1| TPR domain protein [Bacillus cereus G9241]
 gi|229158011|ref|ZP_04286082.1| TPR domain protein [Bacillus cereus ATCC 4342]
 gi|47556613|gb|EAL14945.1| TPR domain protein [Bacillus cereus G9241]
 gi|228625464|gb|EEK82220.1| TPR domain protein [Bacillus cereus ATCC 4342]
 gi|324328298|gb|ADY23558.1| tetratricopeptide repeat family protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 219

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  +N    L    +  EI  +  
Sbjct: 181 YVFEDNNEKALALFKKATEIQPDHF 205


>gi|302814181|ref|XP_002988775.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
 gi|300143596|gb|EFJ10286.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
          Length = 668

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 88/305 (28%), Gaps = 26/305 (8%)

Query: 63  RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
           R F    A+L     K    +   A     +     ++  A K        + F+   LV
Sbjct: 332 RDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLANAEKHAELAVLNNRFNACALV 391

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
              +            A +  +    +      A+Y+L     ++     A     K   
Sbjct: 392 N--QGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVFKKISY 449

Query: 183 ISPDAPWV------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           + P+   V         V+     A +W   +  L  K  +        A LL       
Sbjct: 450 VLPNNTEVLFQIGQVSDVMGNSRQAIKW---LELLVSKVMH-------DAGLLAMLGNLY 499

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294
               D   + H   ES ++C   ++ +       +      KA    +   ++  HPE  
Sbjct: 500 VRCEDDAKALHYFSESHRVCPTDVVVTAWLGSFYLQNELYEKAMPFFQLASRI--HPEEV 557

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
               +        + +    L +  ++   + ++ E L  +  +   +G   +  A    
Sbjct: 558 VKWKLKVALCLRRTGSFSKALHKYKQILSAHPDNAECLRCLVHLCTSLGRKMEVQAYESK 617

Query: 351 AMKIA 355
             K+ 
Sbjct: 618 LWKVD 622


>gi|254416035|ref|ZP_05029791.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196177210|gb|EDX72218.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 762

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 58/152 (38%), Gaps = 4/152 (2%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              +       + ++     +G +  +      +++   +S+ A +  A +   Q   ++
Sbjct: 23  PAVHAQTVPTAVRQAFSLLSQGRVQDAIAAFEAAVRRYPDSLDAKLGLAIAHRRQGNLQQ 82

Query: 279 AEVILEKIWKVNPHPEIAN----IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           A    +++   +P  E+A     ++    SE  V  ++    L  +N   +E+  + +++
Sbjct: 83  AWNAYQQVLAQDPTNELALKSVGLFGTYRSEWQVQGIEALTTLLNLNPNDIEARGLRAQL 142

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
                   +A A   + ++  P   I L  A+
Sbjct: 143 YGFQQRFAEALADYQIVLQANPSPNILLGAAE 174


>gi|119630612|gb|EAX10207.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_b [Homo sapiens]
          Length = 841

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 474 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 533

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 534 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 593

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 594 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 652

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 653 RAIYELAI 660


>gi|73979996|ref|XP_861389.1| PREDICTED: similar to selective LIM binding factor, rat homolog
            isoform 5 [Canis familiaris]
          Length = 1525

 Score = 40.3 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 29/176 (16%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
             +S+    H    ++L        E ++  A  +       P         ++F +    
Sbjct: 1131 ELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIR-AGKPKEAVL----MFFHNQ--- 1182

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  +AQR A       PD+  V E +++Q         A   L +K     ++ +   +L
Sbjct: 1183 DWEAAQRVAE---AHDPDS--VAEVLLRQ---------AREALEEK-----DFQKAEGLL 1223

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            L  R+       +         ++L++C + +   + A +    +   +K    LE
Sbjct: 1224 L--RAQRPGLALNYYKEAGLWSDALRICKDYVPGQLEALQEEYEREATKKGARGLE 1277


>gi|317052270|ref|YP_004113386.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
           indicum S5]
 gi|316947354|gb|ADU66830.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurispirillum indicum S5]
          Length = 1017

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 62/209 (29%), Gaps = 21/209 (10%)

Query: 143 LEMMLQIPATREFAVYSLYFE---------SCRIGDL-----NSAQRYATKALDISPDAP 188
            E  ++ P T    V     E             GD      + ++     +L I  DA 
Sbjct: 83  YEKPVEDPQTVLLGVSGQREEPEKPWGRSIHLERGDQYFLSGDYSRAINEYSLAIGTDAA 142

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +   Y    ++ +AI    +          +      A  L   +    + +   
Sbjct: 143 LAYHNLGVIYTELGDFKKAIESFQRAIAARPSLPES----YSALGLALHEVSRNVEALQY 198

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSE 305
            +++L+L  ++         + +       A     +  ++NP    A        L++ 
Sbjct: 199 HLQALRLDPDNSEFHNNVGNAYLYLGDYANARRHYTRAIEINPSNTQAMANQNSLLLITG 258

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKI 334
           +    ++    +   + ++ E L+ +   
Sbjct: 259 DYDAAIQGFREILSADPDNYEVLMNLGMA 287


>gi|302916241|ref|XP_003051931.1| hypothetical protein NECHADRAFT_78614 [Nectria haematococca mpVI
           77-13-4]
 gi|256732870|gb|EEU46218.1| hypothetical protein NECHADRAFT_78614 [Nectria haematococca mpVI
           77-13-4]
          Length = 515

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 39/211 (18%)

Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            + +LL   Q  L+  + + A    +  +    T    V+        IG    A     
Sbjct: 32  PVSHLLSSAQEHLSRGETSEALIYYDAAIARDPTNYLTVFKRATAYLSIGRTTQATDDFN 91

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRA----------------------------ITF 210
           K L + P        + +    + +W  A                             T 
Sbjct: 92  KVLALKPGFEGAHLQLARLRGRSGDWDLAKNEYRSAGLAPDSAEVKELEEAKLAAALATM 151

Query: 211 LNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSI 260
             + +K         NA       A L   R+    + GD+     D    L L   +  
Sbjct: 152 AEKAQKWEECVKASSNAITVASRSAHLRELRAHCRFEHGDVEEGLSDLRHVLHLRPGDIS 211

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              + +A S             ++K  + +P
Sbjct: 212 PHVVISATSFYGLGDMESGIGQIKKCLQSDP 242


>gi|198421851|ref|XP_002124401.1| PREDICTED: similar to Anaphase promoting complex subunit 7 [Ciona
           intestinalis]
          Length = 542

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 87/238 (36%), Gaps = 20/238 (8%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDI 183
                    ++ A   L+ + +      F +  +   +  + D   A+       +   +
Sbjct: 230 AIACYMADDHDSAMMHLKSLHRQER---FWLRGMDLYASLLYDEKKAEELGKFSTELFAV 286

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           S   P    A+    +L +++++A+      + N  +    +A LL  ++      G++ 
Sbjct: 287 SDLQPESWIALGYHALLNEDYTKAVYL--AARANQLDPFSVQAFLL--KAAGLVGLGEVQ 342

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYT-H 301
            +   + E++ L  + +          +S+N+   A  + +  ++   P P    +    
Sbjct: 343 TALSHSKEAISLAPHRLDCYAKLVSCYMSENRNNDALTVAKSAFEALGPSPGSYVLCALT 402

Query: 302 LLSENTV-----GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +L +++V       + RAL L+  +K ++E+   +           +A     LA + 
Sbjct: 403 MLPDSSVLDKAGKLVDRALTLDPNHKSAIETKCTIL---YRQEKYSEAIKCLKLATQR 457


>gi|193213199|ref|YP_001999152.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
 gi|193086676|gb|ACF11952.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
          Length = 646

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 92/289 (31%), Gaps = 43/289 (14%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +     ++ +    +H    + L  +  L+ Q    +  Y  A    +            
Sbjct: 152 DYDQVNRLLAEFRNKHAELRQDLARVDYLQGQNYELQINYPEAERYYKKAAATEDENPLY 211

Query: 157 VYSLYFESCRIGDLNSAQRYATKAL-----DISPDAPWVT---EAVVQQYVLAKEWSRAI 208
           + +      ++G  + A+    +AL      + P+ P V      +         +  A 
Sbjct: 212 LDAHATILWKMGRYDEAEPLFRRALAIDKKALGPNHPNVAIRLNNLANLLADQGNYRDAE 271

Query: 209 TFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               +            +    N    + ++  +    D+ + +     AI    L  N 
Sbjct: 272 PLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRALAIREKSLGPNH 331

Query: 260 IM--------ASICAAKSLISQNKK--RKAEVILEKIWKVNPHPEIANIYTHL------- 302
                     A++   KS   + +   R+A  I EK    N HP++AN   +L       
Sbjct: 332 PGVATTLNNLAALLDNKSRYDEAEPLYRRALAIREKSLGPN-HPDVANTLNNLAVLLDNK 390

Query: 303 -LSENTVGKLKRALRL--EEINKESVESLVIVSKIALEMGS---IDQAH 345
              +      +RA+ +  + +     +    ++ +A+ +G+    D+A 
Sbjct: 391 SRYDEAEPLYRRAIAIDEKALGPNHPDVANTLNNLAVLLGNKSRYDEAE 439


>gi|90076642|dbj|BAE88001.1| unnamed protein product [Macaca fascicularis]
          Length = 449

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 13/155 (8%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283
            L  R+L +     +  +  D + +LKL   +++  + +    A++LI+Q    +   +L
Sbjct: 97  ALCGRALVHLALDQLQEAIDDILSALKLGPGTVVPELRSLKPEAQALITQGLYSRCRALL 156

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                     ++ +    L  E+T G L     L +I+   ++  +++  I +  GS ++
Sbjct: 157 S---------QLLDTGAPLEDEDTQGLLAVGQALIKIDAGQLDWHLLLVDILMARGSYEE 207

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           A      A+  AP  E       + +    +    
Sbjct: 208 AGTHLEKALHPAPTSEAARARLGLLRLKKGDVPAA 242


>gi|1688076|gb|AAB36872.1| tetratricopeptide repeat protein [Homo sapiens]
 gi|21707455|gb|AAH33772.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [Homo sapiens]
 gi|60814211|gb|AAX36291.1| DnaJ-like subfamily C member 7 [synthetic construct]
 gi|61355290|gb|AAX41124.1| DnaJ-like subfamily C member 7 [synthetic construct]
 gi|123992776|gb|ABM83990.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [synthetic construct]
 gi|123999522|gb|ABM87316.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [synthetic construct]
          Length = 484

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    +  A ++  
Sbjct: 169 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 224

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 225 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 284

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+
Sbjct: 285 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 344

Query: 287 WKVN 290
           ++  
Sbjct: 345 YQTE 348


>gi|332021351|gb|EGI61725.1| Amyloid protein-binding protein 2 [Acromyrmex echinatior]
          Length = 583

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 194 VVQQYVLAKEWSRAITF------LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           ++   V  +++  A         + +K K+ +  N N A L    S+    + +   ++ 
Sbjct: 173 LLHAQVAYRDFDGAAETHQLAMEMIEKLKSKQYNNSNHAALFAEFSVLFYIRSEYDEAHR 232

Query: 248 DAIESLK-LCDNSIMASIC------AAKSLISQNKKRKAEVILEKI 286
            +IE+LK L  +   A I       AAKS + + + +KA++++++ 
Sbjct: 233 WSIEALKQLRPSL-PAGIIVDVLRQAAKSCVVKREFQKADLLIKEA 277


>gi|17432229|gb|AAL39004.1|AF111802_1 MSTP021 [Homo sapiens]
 gi|158259059|dbj|BAF85488.1| unnamed protein product [Homo sapiens]
          Length = 687

 Score = 40.3 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 320 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 379

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 380 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 439

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 440 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 498

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 499 RAIYELAI 506


>gi|296200303|ref|XP_002747530.1| PREDICTED: crooked neck-like protein 1 [Callithrix jacchus]
          Length = 687

 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 320 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 379

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 380 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 439

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 440 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 498

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 499 RAIYELAI 506


>gi|254488737|ref|ZP_05101942.1| TPR domain protein [Roseobacter sp. GAI101]
 gi|214045606|gb|EEB86244.1| TPR domain protein [Roseobacter sp. GAI101]
          Length = 572

 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 11/198 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            QY++A E+L+ +         A         +    + A     +      D P V  A
Sbjct: 306 GQYDLAIEELQAVPADDPAYHAAELGRAAALRQSDKPDQAIEVLQQLTRSHGDLPAVHSA 365

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +         W  AI   ++  +   E N  R +L  AR +     GD   +  D   +L
Sbjct: 366 LGDALRAQDNWEAAIKSYDRAVELTSESNPQRWVLFYARGIAEERSGDGKGAEKDFRAAL 425

Query: 254 KLCDNSIMASICAAKSLISQNK-KRKAEVILEKIWKVNPHPEI--------ANIYTHLLS 304
            +             SL+ Q +   +A  ++E+    +  P+           +Y     
Sbjct: 426 AINPEQPQVLNYLGYSLVEQGRNLDEALNMIERAVAAS--PDSGYIVDSLGWVLYRLGRY 483

Query: 305 ENTVGKLKRALRLEEINK 322
           E  VG+++RA+ L  ++ 
Sbjct: 484 EEAVGQMERAVELIAVDP 501


>gi|60825965|gb|AAX36741.1| DnaJ-like subfamily C member 7 [synthetic construct]
 gi|61365329|gb|AAX42691.1| DnaJ-like subfamily C member 7 [synthetic construct]
          Length = 485

 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178
            +L+ +      +Y  A      +L++ +T      V  L  Y+E C    +  A ++  
Sbjct: 169 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 224

Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +AL ++PD      A                      +  A     +         +  A
Sbjct: 225 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 284

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L   R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+
Sbjct: 285 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 344

Query: 287 WKVN 290
           ++  
Sbjct: 345 YQTE 348


>gi|7758|emb|CAA41263.1| crn [Drosophila melanogaster]
          Length = 702

 Score = 40.3 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 80/252 (31%), Gaps = 26/252 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176
            +    +++++ A    +  L       T+E    +      + GD         S ++Y
Sbjct: 254 ARFEEGQKEHDRARIIYKYALDHLPKDRTQEL-FKAYTKHEKKYGDRAGIEDVIVSKRKY 312

Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230
              + +  +P         ++      +  +      +   N    N     R    L I
Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWI 372

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L+L            +  A+  I   + ++A   L  
Sbjct: 373 NYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGL 432

Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              + P  ++   Y  L     E    ++    +  E   E+  + +  +++   +G  D
Sbjct: 433 AIGMCPRDKLFRGYIDLEIQLREFERCRM-LYEKFLEFGPENCVTWMKFAELENLLGDTD 491

Query: 343 QAHAKAMLAMKI 354
           +A A   LA++ 
Sbjct: 492 RARAIFELAVQQ 503


>gi|331664114|ref|ZP_08365024.1| conserved hypothetical protein [Escherichia coli TA143]
 gi|331059913|gb|EGI31890.1| conserved hypothetical protein [Escherichia coli TA143]
          Length = 1096

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G  ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGHQDNARLQREKLLRD 632


>gi|307110999|gb|EFN59234.1| hypothetical protein CHLNCDRAFT_138218 [Chlorella variabilis]
          Length = 703

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 36/150 (24%), Gaps = 21/150 (14%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133
             LH R   +G++AL    +S+        R+M      +  F              +  
Sbjct: 421 RWLHSRRE-RGHEALTHVALSLRLVVAKALRRMSKLDEAEMHFK-------------VLA 466

Query: 134 RQYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATK-----ALDISPD 186
                       M           A+  +   +   GD  +A     +     AL   P 
Sbjct: 467 GWVTEGETAFGEMSGSSPVSIHQQALRGIALVALERGDKGAAMAQYERILGKAALGRGPA 526

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
             W             +   A   L    K
Sbjct: 527 EHWAHADYGWLLYQEGDIQGARQHLEDALK 556


>gi|291295766|ref|YP_003507164.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Meiothermus ruber DSM 1279]
 gi|290470725|gb|ADD28144.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Meiothermus ruber DSM 1279]
          Length = 868

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 60/180 (33%), Gaps = 17/180 (9%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQIALA 132
           H      G  A   G + +   +   A + +     +    ++ L+ L    L  ++A  
Sbjct: 200 HSARNRAGNLA-SIGNLYMEMGDFAQAHRYYEQALAEAHQSSDRLIELQVMQLMAELAYK 258

Query: 133 ERQYNIAHEKLEMMLQI------PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            + Y  A    + +LQ          +  A+  L      +G+  +A +   + L ++  
Sbjct: 259 RQDYPQALALYQTILQASQQQGLERMQATALEGLAKAQMALGEPQTATQTLLEVLALARS 318

Query: 187 APWVTEAVVQQYVLAKEW------SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + W    +     L + W       +A     +  + A +  R R+  L  R L    K 
Sbjct: 319 SGWGATLLDVLLSLGEAWLAQGALEQARACAQEALELASQARRKRSTYLAHRLLAQIHKA 378


>gi|271502565|ref|YP_003335591.1| cellulose synthase operon c domain-containing protein [Dickeya
           dadantii Ech586]
 gi|270346120|gb|ACZ78885.1| cellulose synthase operon C domain protein [Dickeya dadantii
           Ech586]
          Length = 1300

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 80/288 (27%), Gaps = 50/288 (17%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQI------------ALAERQYNIA 139
           A+ +  +A K+      + T        L    L+                  + +   A
Sbjct: 376 ASGDKGMAAKLFRADVLRRTNDFPQAERLYRDILQTDADNRNAKEGLYYVLREQNRTAEA 435

Query: 140 HEKL--------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           +             M   P      + +   ++  +GD   A     + +   P+  W+ 
Sbjct: 436 NTLFAALPENVRRSMAPRPVATSTPIRNEAKQALAVGDTTRAIGLLQQGVQRFPNDGWLR 495

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-------RSLENADKGDMIA 244
             + + Y      + A + +    +     +   A  L A       ++     +     
Sbjct: 496 LDLARIYQQQGNTAAATSVMQPLFRAGASGDDLYAAALFASENNAWQQASTLLSRIPPRD 555

Query: 245 SYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
               +   + ++  N  MA+   A+  +S+ +   A   L +   V P            
Sbjct: 556 QNEASRSLARRVNFNLQMAT---AQVYLSRGENAAAANTL-RALSVTP------------ 599

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            +N     K A  L         + V V +  ++ G    A   A   
Sbjct: 600 PDNPADAGKLARALAA--SGDTTAAVAVVRSNMQRGVQGNAGDYADQV 645



 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 15/250 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL     + A      +LQ       A+  + + + R GD  +A  Y  +A     +  
Sbjct: 276 TALNSGDISSAQTAFGQVLQANPEDADALAGMGYAAQRRGDFAAAASYLERAARQGGENS 335

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A  QQ      +   +    Q  K+          L ++  L  A     +A+   
Sbjct: 336 ----AQRQQQAEDARFYAQLANAQQAMKSGNTAQ----ALSLSEPLVQASGDKGMAAKLF 387

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
             + L+  ++   A       L +    R A+  L  + +       AN     L EN V
Sbjct: 388 RADVLRRTNDFPQAERLYRDILQTDADNRNAKEGLYYVLREQNRTAEANTLFAALPEN-V 446

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367
            +      +        E     +K AL +G   +A       ++  P      L LA+I
Sbjct: 447 RRSMAPRPVATSTPIRNE-----AKQALAVGDTTRAIGLLQQGVQRFPNDGWLRLDLARI 501

Query: 368 EQANSHNTDK 377
            Q   +    
Sbjct: 502 YQQQGNTAAA 511



 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 46/232 (19%)

Query: 128 QIALAERQY-------NIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
           Q    +  Y       ++A   L+   M+    T+   + +LY  +   GD   A ++  
Sbjct: 39  QALFDQADYWHQRSHDDLARSALQKILMVDANNTKALYLMALY--AQNSGDSAEAAKWRE 96

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +   +SP  P                   +  L+  ++ A           +A + + A 
Sbjct: 97  RLSKVSPQDPL------------------LQSLDNARQAAAIPQSQ-----LALARQQAR 133

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
            G++ AS         L   +   +  AA+  ++    R    +L +   ++   E+   
Sbjct: 134 SGNISASLQTWRN---LFSGNQPPAGIAAEYYLTMAGDR---TLLPQA--IDHLRELTAA 185

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                 ++T   +     L        E L I+S +A      DQA  +A+L
Sbjct: 186 ----RPQDTSAAVALGKALTYQEPTRREGLQILSGLASGSTDADQAMRQALL 233


>gi|229186635|ref|ZP_04313796.1| TPR domain protein [Bacillus cereus BGSC 6E1]
 gi|228596894|gb|EEK54553.1| TPR domain protein [Bacillus cereus BGSC 6E1]
          Length = 219

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEKNPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|256828531|ref|YP_003157259.1| hypothetical protein Dbac_0720 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577707|gb|ACU88843.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 186

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 2/136 (1%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +  + LA K +   + +    ++ L+ L  V  A A   +  A       L+       A
Sbjct: 45  SGELDLALKAYETAAAKDRSWDQPLINLGNVHSAQA--DWTQAAASYRQALKRNPENSEA 102

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + +L +    + +   A  +++KA+   P  P     + Q      E  +A+  L++  +
Sbjct: 103 MNNLAYALVNLDEPREALEWSSKAVQAEPGNPLFRATLAQALAGTGEREKALALLDETLQ 162

Query: 217 NAKEWNRNRAILLIAR 232
                +  R  +   R
Sbjct: 163 TLPSDDPLREKIAALR 178


>gi|12711631|gb|AAK01924.1|AF318302_1 CGI-201 protein, short form [Homo sapiens]
          Length = 687

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 320 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 379

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 380 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 439

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 440 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 498

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 499 RAIYELAI 506


>gi|253998757|ref|YP_003050820.1| hypothetical protein Msip34_1046 [Methylovorus sp. SIP3-4]
 gi|253985436|gb|ACT50293.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 566

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 67/257 (26%), Gaps = 26/257 (10%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF-AVYSLYFESC 165
               Q      + L+ LL             A      ML+  P T     V  +  ES 
Sbjct: 6   QQARQPGQSEMQALIGLLNA------GHMPQAEATARSMLRQYPQTLMLHNVLGIALESQ 59

Query: 166 RIGDLNSAQRYATKALDISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           +     +A      A+ + P    +      V+           AI    +      +  
Sbjct: 60  QKYADAAASY--RSAIALEPKIAEIHFNLGVVLGHL---GRMDEAIASYRKAISLKPDL- 113

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A+            G    +     ++  +      A       L  Q K   A   
Sbjct: 114 ---AVAYFNLGFALQTLGRYEEAIPSYRKAAAMQPTFYEAHGNLGTVLQKQGKMEDAIAS 170

Query: 283 LEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             K  +++  P     +A              +        +  + V++   + +   + 
Sbjct: 171 YRKALEIHADPRGYFNLATALRD--HGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQ 228

Query: 339 GSIDQAHAKAMLAMKIA 355
           G++D+A      A+ + 
Sbjct: 229 GNMDEAVKAYQQALSLD 245


>gi|218245745|ref|YP_002371116.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218166223|gb|ACK64960.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 388

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 22/203 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE---- 154
           +  LA ++ + +    +   E +  L+E   A AE+  +          + P T +    
Sbjct: 195 DSDLAEQLAAQLGIPSSNPQEIIDALMEQFQAQAEQDQSQ---------ETPQTEQEWFN 245

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +     E  R GDL  A     +AL+I+P                  +  AI   ++ 
Sbjct: 246 LGL-----EQARQGDLEGAIASWDRALEINPSLAEGWHNRGSALGTLGRFDEAINSFDRA 300

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                +    +A  L   +L N  + +   +     ++L++      A    + +L    
Sbjct: 301 IY--LDAQDFQAWNLKGNALYNLQQWE--GAITCWDKALEVRPEFYQAWYNRSSALEELG 356

Query: 275 KKRKAEVILEKIWKVNPHPEIAN 297
           +  +A     K  ++ P  E+A+
Sbjct: 357 RTEEAIAGYRKALEIEPTFELAS 379


>gi|125555561|gb|EAZ01167.1| hypothetical protein OsI_23195 [Oryza sativa Indica Group]
          Length = 674

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 90/282 (31%), Gaps = 31/282 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--IAHEKLE-MMLQIPATRE 154
             +  AR+++          +E+   L        ER      A    +  + ++P  + 
Sbjct: 240 GEVERARRVYERA-ADLLADDEHAEVLFVAFAEFEERCREVERARAVYKYALDRVPKGQA 298

Query: 155 FAVYS--LYFESC--RIGDLNSAQ------RYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             +Y   L FE      G +  A       +Y    +  +P         ++        
Sbjct: 299 EELYRKFLAFEKQFGDRGGIEDAIVGKRRFQY-EDEVRKNPLNYDSWFDYIRLEESVGNK 357

Query: 205 SRAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD- 257
            R      +   N       R       L I  +L E  D  DM  +     E LKL   
Sbjct: 358 DRIREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELDAKDMERTREVYSECLKLIPH 417

Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
                    + AA+  I Q   + A  IL     + P  +I   Y  +  E  +G  +R 
Sbjct: 418 KKLTFSKVWLMAAQFEIRQKNLKAARRILGNAIGMAPKGKIFKKYIEI--ELYLGNFERC 475

Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             L     E +  +  + +  +++   +G  D+A +   LA+
Sbjct: 476 RTLYEKYIEWSPANCYAWMKYAELEKSLGETDRARSIYELAI 517


>gi|47220645|emb|CAG06567.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1868

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 131  LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             A ++Y  A +K       E +      +     +L     ++ D   A+ +ATKAL++ 
Sbjct: 1102 EAAQRYQYALKKFPREGFSEDLKTFRELKVSLFLNLSRCRRKMNDFGMAEEFATKALELK 1161

Query: 185  PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            P +     A  +    +++++ A+  L +  K++      + +L
Sbjct: 1162 PKSFEAYYARARAKRSSRQFTEALEDLKEAMKHSPNNREIQRLL 1205


>gi|17137126|ref|NP_477118.1| crooked neck [Drosophila melanogaster]
 gi|17380353|sp|P17886|CRN_DROME RecName: Full=Protein crooked neck
 gi|2827496|emb|CAA15705.1| EG:30B8.1 [Drosophila melanogaster]
 gi|7290299|gb|AAF45760.1| crooked neck [Drosophila melanogaster]
 gi|15291643|gb|AAK93090.1| LD21701p [Drosophila melanogaster]
 gi|220944718|gb|ACL84902.1| crn-PA [synthetic construct]
          Length = 702

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 80/252 (31%), Gaps = 26/252 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176
            +    +++++ A    +  L       T+E    +      + GD         S ++Y
Sbjct: 254 ARFEEGQKEHDRARIIYKYALDHLPKDRTQEL-FKAYTKHEKKYGDRAGIEDVIVSKRKY 312

Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230
              + +  +P         ++      +  +      +   N    N     R    L I
Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWI 372

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L+L            +  A+  I   + ++A   L  
Sbjct: 373 NYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGL 432

Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              + P  ++   Y  L     E    ++    +  E   E+  + +  +++   +G  D
Sbjct: 433 AIGMCPRDKLFRGYIDLEIQLREFERCRM-LYEKFLEFGPENCVTWMKFAELENLLGDTD 491

Query: 343 QAHAKAMLAMKI 354
           +A A   LA++ 
Sbjct: 492 RARAIFELAVQQ 503


>gi|152976809|ref|YP_001376326.1| TPR repeat-containing protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025561|gb|ABS23331.1| TPR repeat-containing protein [Bacillus cytotoxicus NVH 391-98]
          Length = 219

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 11/201 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDEKSAT 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   +++  A     Q  +         A ++    + +   G+   +    
Sbjct: 71  AYYGLGNIYYSREQFQEAKAMFEQAMQGGL----QSADIVFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLS 304
             + +L +  + A+      L      ++A+   EK+ +++   E A+ Y      ++  
Sbjct: 127 QRAAELDEMDVEAAFQCGLCLARLEHVKEAKPYFEKVLQMD--KEHADAYYNLGVAYVFE 184

Query: 305 ENTVGKLKRALRLEEINKESV 325
           EN    L    +  +I  +  
Sbjct: 185 ENKEKALALFKKATKIQPDHF 205


>gi|113475008|ref|YP_721069.1| FkbM family methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110166056|gb|ABG50596.1| methyltransferase FkbM family [Trichodesmium erythraeum IMS101]
          Length = 415

 Score = 40.3 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 3/136 (2%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+  +   +  A + + Y   Q   +N  L+YLL  +I     Q + A    + ++Q+ 
Sbjct: 45  GLIEQSQGKLEEATQFYKYAF-QIDSNNISLLYLL-ARITQELNQLDEAINYWQKLVQLK 102

Query: 151 ATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  Y  +     + G  + A      AL ISP++    +A+    +  ++   A  
Sbjct: 103 PDGTLEFYGNIGNSLVQQGKFDEALNCFRDALKISPNSFQAHQAIGNLLIRKEQLLEAKL 162

Query: 210 FLNQKKKNAKEWNRNR 225
             ++  +    +   +
Sbjct: 163 EFSKALEINPNYQTAK 178


>gi|282165353|ref|YP_003357738.1| hypothetical protein MCP_2683 [Methanocella paludicola SANAE]
 gi|282157667|dbj|BAI62755.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 358

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 7/195 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           RIG+   A     KAL++ P +  +   +           +A+   ++      +     
Sbjct: 124 RIGESEEALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPD----N 179

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A   + R    + +G    +      S+++  +   A        I   K   A  +L+K
Sbjct: 180 AAAWMGRGEVLSKEGKEAEALECYDRSIRISPDIAGAWYGKGMLFIKGGKYDDALAMLDK 239

Query: 286 IWKVNP-HPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             ++   H +          LS      L    ++ E+   S  +  +   +   + + +
Sbjct: 240 AVEMRDGHADAWFYRGCVLELSGRIREALDCYRKVTELQPGSQAAWFMRGVLLGRLEAYE 299

Query: 343 QAHAKAMLAMKIAPR 357
           +A      A++I PR
Sbjct: 300 EAMPCFDKALEINPR 314


>gi|258404381|ref|YP_003197123.1| TPR repeat-containing protein [Desulfohalobium retbaense DSM 5692]
 gi|257796608|gb|ACV67545.1| TPR repeat-containing protein [Desulfohalobium retbaense DSM 5692]
          Length = 208

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 6/154 (3%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            Q   A + L+  +   P   E  V  L   +    DL +   +  +A +I P       
Sbjct: 40  GQLQEAEDHLKQAIQADPELAEAYVQ-LGGLAMHRNDLAACMSFNQRATEIRPRFAVPQG 98

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +   ++      +A+  L +      ++ +  A L  A  ++    GD+     +  ++
Sbjct: 99  NLGFVHLQQGNVDQAVKHLKRAISLDPQFVQAIATLGNAYLMD----GDVDGCIEENQKA 154

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L      A      + + +    KA    ++ 
Sbjct: 155 IDLQPTFGPAYNNMMLAYMEKGDFAKASAYCKQA 188


>gi|242310515|ref|ZP_04809670.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239522913|gb|EEQ62779.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 431

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 16/141 (11%)

Query: 122 VYLLEVQIALAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           +Y+++  +AL    Y  A E      E+       RE  +  L        D   A+  A
Sbjct: 46  IYIIQAYVALDMGDYKTARENLQKAYELTKNKEYLRE--IIGLLVL---EKDFLKAKNAA 100

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------ 231
              L +SP+   V +A+V+      +   A+  +    KN            +       
Sbjct: 101 KDYLKVSPNDEKVRQALVEILGSMGDLQGAVQEVQILLKNNASVQNLEIASSVYFLQKDY 160

Query: 232 -RSLENADKGDMIASYHDAIE 251
            R+LE   K   I      ++
Sbjct: 161 SRALEYLQKAYEINKDEKILD 181


>gi|148677249|gb|EDL09196.1| tetratricopeptide repeat domain 21A, isoform CRA_b [Mus musculus]
          Length = 1282

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%)

Query: 135  QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             Y  A      +L+        +  L     R G L  A  +   A  +S   P      
Sbjct: 934  NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 992

Query: 195  VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               Y          + + A+ FLN+ +K++         L     ++     D      +
Sbjct: 993  --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1045

Query: 249  AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306
            A ESL    NS      A++    Q+  R AE +L + +   PH E              
Sbjct: 1046 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1096

Query: 307  TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357
               + K          + + +  K+S+ +L+ +++  + +  + +A  +     K+    
Sbjct: 1097 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1156

Query: 358  ------KEIFLLLAQIEQANSHNTDKILYWTQS 384
                  ++ +LLLA I        D  L   + 
Sbjct: 1157 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1188


>gi|221133964|ref|ZP_03560269.1| Thioredoxin domain-containing protein [Glaciecola sp. HTCC2999]
          Length = 281

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 4/122 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD   A  +A +A  I P+       +    +   + S A   L+       + 
Sbjct: 121 QEKLNEGDAQGALPFAQQAYAIKPENLDCQYMLADCQIDVGQISAAKALLDN--IGLADQ 178

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +    +L     +E A++                       SI  A +L + +K  +A  
Sbjct: 179 DNRYTVL--QGKIELAEQAAESPELKALQAQYDADPTDKQISIELAVALHAAHKTEEALG 236

Query: 282 IL 283
           +L
Sbjct: 237 LL 238


>gi|189346021|ref|YP_001942550.1| hypothetical protein Clim_0478 [Chlorobium limicola DSM 245]
 gi|189340168|gb|ACD89571.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
           245]
          Length = 343

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 81/269 (30%), Gaps = 15/269 (5%)

Query: 132 AERQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A      A     E +   P+    +    L       G  + A     +AL I+   P 
Sbjct: 72  ASGDVTGAVADYSEALKLDPSLAAASNNRGLAMAKI--GKYHEAVLDYNQALRINAVLPE 129

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           V   +    +   + S A+   N        +    A+     + +   +     +  D 
Sbjct: 130 VYNNLGLARIALGDQSGALDDFNTALALKPFYP--EALFNRGCARQKLSE--HREALRDF 185

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLS 304
            + +            AA S  +    + A V   K   ++  P  A  +       + S
Sbjct: 186 QQVISFRSGYAEPYFYAALSRSAMGDHKGALVDYTKAIAIS--PSYAEAFAGRALAKIRS 243

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            +  G L     +  +  ++ E     + + +++     A     LA++          L
Sbjct: 244 GDYRGALDDYDTVIGLQSDNPELYYNRALVKVKLSDYPGAEIDCSLALERNKVYAEAFFL 303

Query: 365 AQIEQANSHNTDKILYWTQSALHAMPDPL 393
             I ++   N + +L   + +  A  +P 
Sbjct: 304 RGIVRSELGNREGMLADLRFSADAGYEPA 332


>gi|326795290|ref|YP_004313110.1| response regulator receiver [Marinomonas mediterranea MMB-1]
 gi|326546054|gb|ADZ91274.1| response regulator receiver [Marinomonas mediterranea MMB-1]
          Length = 555

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 5/106 (4%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
            +PW  +A++  Y+  + W   +  L + +   ++++       +  +     +     +
Sbjct: 175 YSPWCKKALIDAYLGLERWQE-LEVLCKSELEVRDYD----WAWLGLAKLAIARKQWDEA 229

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                  LKL   +I      A+    + K  +A+ +LE    ++P
Sbjct: 230 IKHLEHVLKLFPQAIAGYDLLAECFKEKGKLPEAQKVLEDALSISP 275



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   +      + A ++    L + P A    + + + +    +   A   L      +
Sbjct: 215 GLAKLAIARKQWDEAIKHLEHVLKLFPQAIAGYDLLAECFKEKGKLPEAQKVLEDALSIS 274

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              ++ +       ++ + + GD+ ++   +  +LKL 
Sbjct: 275 PRIHKRQR----DMAVVSMENGDVQSALKASQHTLKLA 308


>gi|331684198|ref|ZP_08384794.1| conserved hypothetical protein [Escherichia coli H299]
 gi|331079150|gb|EGI50352.1| conserved hypothetical protein [Escherichia coli H299]
          Length = 1093

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G  ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|307181130|gb|EFN68861.1| Tetratricopeptide repeat protein 28 [Camponotus floridanus]
          Length = 2073

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 68/219 (31%), Gaps = 26/219 (11%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
           +H+R  +   +A   GL + A   + +A +    + +   FH + L              
Sbjct: 703 MHQRQLNLARQAADRGLEAAAYGALGIAHRATKNLDKALGFHTQELTL------RQEAGD 756

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEA 193
                     +  +           Y  + +     L  A+  A   ++       +  A
Sbjct: 757 LRGECRAHGNLGAV-HMAL----GQYTHAVKCYQEQLERAKELADSGVEAQ-ALGNLGIA 810

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +        +  AI +  Q+    +      A+L   R+L N   GD   +  D  E++
Sbjct: 811 RLNM----AHYEDAIGYFEQQLATLEPLTTGTALLDKTRALGNL--GDCYEALGDLEEAI 864

Query: 254 K-LCDNSIMASICAA-----KSLISQNKKRKAEVILEKI 286
           K        A+   +     ++     + R+A   L + 
Sbjct: 865 KCHEQQLTAATKLKSIRDQERAYRGLGRAREATGNLPEA 903



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 6/160 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A     Y +A       L +         +      ++G   +A + A KA +++P  P
Sbjct: 34  AACQNGDYALAATLYTEALALDPLSHVLYSNRSAARLKMGLFAAALQDAVKATELNPQWP 93

Query: 189 WVT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                  V    L +    A+   +    +    ++  + L+ A                
Sbjct: 94  KAYYRQGVALQCLGRH-GEALVAFSTGLAHDASNHQLLSGLVEASLKSPLRPTLEPTFQQ 152

Query: 248 DAIESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEKI 286
             + ++KL ++  ++ S+   + L +  + R A  +LE  
Sbjct: 153 --LRAMKLDESPFVVISVVGQELLGA-GQYRAAAGVLEAA 189


>gi|297624994|ref|YP_003706428.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix
           DSM 17093]
 gi|297166174|gb|ADI15885.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
           17093]
          Length = 357

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 22/271 (8%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           A+     A    + +L+  A    A+          G  +       + L+ +P+     
Sbjct: 37  AQGNCLSARLFYQQVLEREANNPDALLGKGQALVCEGAFDEGIATLQRVLEAAPERTEAY 96

Query: 192 EAVVQQYVLAKEWS---------RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             +   YV     +          A+  L + +          A LL  R +    +G++
Sbjct: 97  LRLASAYVEQHRNAPQRHTEGLQEALAVLEEAESAGLGG----AELLNLRGMILYRRGEL 152

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---- 298
            A+      ++ L   +         + +   +   A   L +   +N  P+ A+     
Sbjct: 153 EAARDALQRAVALDSTAAAYYENLGLTYLGLGELEPAVRTLRRAVTLN--PDSASARNQL 210

Query: 299 -YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +LL       L    +   +  E +E+   + +   + G +  A       + +   
Sbjct: 211 GSAYLLLGRCEDALFELEQAVSLAPEQLETNFNLGRALFDCGEVRAARPYFEKVVALDVT 270

Query: 358 KE--IFLLLAQIEQANSHNTDKILYWTQSAL 386
               ++  LA+I+    +    +   T+ AL
Sbjct: 271 ALPPVYTYLARIDLEEGNYDAAVTQATKGAL 301


>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 1279

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 4/112 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A    T+AL+I+PD P    A         +   AI    Q      ++    A 
Sbjct: 593 GDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDY----AY 648

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +   R +  +D  D   +  D  ++L +  +   A      +       + A
Sbjct: 649 IYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYYDLGNYQSA 700


>gi|146099591|ref|XP_001468684.1| hypothetical protein [Leishmania infantum]
 gi|134073052|emb|CAM71772.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322502721|emb|CBZ37804.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 425

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 20/141 (14%)

Query: 166 RIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQ---QYVLAKEWSRAITFLNQK--K 215
             G +    + A  A  I      P +P +   +++    + +  ++      L Q    
Sbjct: 258 AAGQVERQLQLAQAAYSIQERRLGPMSPQLAMTLLEVAEAHRVNGDFYNQKALLEQAVEL 317

Query: 216 KNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSI--------MASIC 265
           +      ++  ++    +L +A     +  +     +E+LK+              A++ 
Sbjct: 318 QQRAFGQQHTQLIDTYIALGDACGQLENPKSQAQYYLEALKIARQRFQGRHIAIGKAAVS 377

Query: 266 AAKSLISQNKKRKAEVILEKI 286
           AA++ +S   K KA+ +L++ 
Sbjct: 378 AARAYLSHGNKAKAQALLDEA 398


>gi|73979998|ref|XP_540128.2| PREDICTED: similar to selective LIM binding factor, rat homolog
            isoform 1 [Canis familiaris]
          Length = 1749

 Score = 40.3 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 29/176 (16%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
             +S+    H    ++L        E ++  A  +       P         ++F +    
Sbjct: 1131 ELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIR-AGKPKEAVL----MFFHNQ--- 1182

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  +AQR A       PD+  V E +++Q         A   L +K     ++ +   +L
Sbjct: 1183 DWEAAQRVAE---AHDPDS--VAEVLLRQ---------AREALEEK-----DFQKAEGLL 1223

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            L  R+       +         ++L++C + +   + A +    +   +K    LE
Sbjct: 1224 L--RAQRPGLALNYYKEAGLWSDALRICKDYVPGQLEALQEEYEREATKKGARGLE 1277


>gi|325921459|ref|ZP_08183314.1| tetratricopeptide repeat protein [Xanthomonas gardneri ATCC 19865]
 gi|325548006|gb|EGD19005.1| tetratricopeptide repeat protein [Xanthomonas gardneri ATCC 19865]
          Length = 551

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 18/260 (6%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIG 168
           +++    +    LL  +IA   ++Y+ A E    +   P   E  + +   LY    +  
Sbjct: 291 KRNATKPDPDRRLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPE 350

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            L  A+     A               + +  A +    +    +      +       L
Sbjct: 351 ALAEARALQGDASADDDARRDAYVLEAELHQRAGDAPGELDAFERGLAAYPD----DGAL 406

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIW 287
           L AR L    + D+  +  D  + L     ++ A +           + ++A  ++++  
Sbjct: 407 LYARGLAWERRDDVPRAEADLRKILVAEPENVGALNALGYTLADRTTRYKEALALIDRAR 466

Query: 288 KVNP-HPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             +P +P I       +Y     +  + +L+RA  L +      E    V ++    G  
Sbjct: 467 TADPDNPAIVDSYGWVLYRMGRLKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQ 522

Query: 342 DQAHAKAMLAMKIAPRKEIF 361
           D+A      A ++ P     
Sbjct: 523 DEARRYFDEARRLDPDNRAL 542


>gi|322830836|ref|YP_004210863.1| cellulose synthase operon C domain protein [Rahnella sp. Y9602]
 gi|321166037|gb|ADW71736.1| cellulose synthase operon C domain protein [Rahnella sp. Y9602]
          Length = 1320

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 8/76 (10%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++   +   A+ +   +    T        LLE ++A A+  +  A      +L+    
Sbjct: 755 VALGEGDNQRAKTLMEGLRGPRTPDR----LLLEARVAEAQGDHQQAL----ALLRSAKG 806

Query: 153 REFAVYSLYFESCRIG 168
           +   +     ++   G
Sbjct: 807 KMIGLEGTDSQAQVAG 822



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 81/290 (27%), Gaps = 54/290 (18%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y  L     +  + +   A    + ++Q      +    LL   I   +     A ++  
Sbjct: 349 YAQLAKAKDAAGSGSYDAALAAVTPLTQVGGEKGQSAS-LLRADILRRKGDLAGAEQQYS 407

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +      R      LY+                               V++Q     E 
Sbjct: 408 ALGDNADARA----GLYY-------------------------------VLRQQNKTAEA 432

Query: 205 SRAITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           S+ +  L    +          ++  +  ++ +     D   + +   ++ +   +++  
Sbjct: 433 SQVLKTLPAGIQAKMNPPTVADVIEPMRRQAAQAVANNDPQRALNILQQARERQPSNVWV 492

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
            +  A+ L SQ +  +A+ I+       P    A++Y   L  +       A  L     
Sbjct: 493 KLDMARILQSQGQTAQAQSIM--APSARPGASSADLYAAALFASETKNWSTANALLSRIP 550

Query: 323 E--------------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                          +  + +  ++  L+ G+   A        +  P  
Sbjct: 551 RSSQNQGMRELAQRANFNAQMADAESYLQQGNAAAASNTLRALAQNPPAA 600



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 36/282 (12%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDA 187
            AL     N A  K E +L        A+  L + + R G+   A +Y +KA     P++
Sbjct: 277 TALNSGDVNSAKAKFESVLADNPNDADALAGLGYIAQRSGNFEQASQYLSKAAAQGGPNS 336

Query: 188 P----WVTEAVVQQYVLA-------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                   ++     +           +  A+  +    +   E  ++ ++L   R+   
Sbjct: 337 AQLSNQAQDSAFYAQLAKAKDAAGSGSYDAALAAVTPLTQVGGEKGQSASLL---RADIL 393

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-----IWKVNP 291
             KGD+  +           D    A       L  QNK  +A  +L+        K+NP
Sbjct: 394 RRKGDLAGAEQQYSALGDNAD----ARAGLYYVLRQQNKTAEASQVLKTLPAGIQAKMNP 449

Query: 292 HPEIAN--------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            P +A+            + + +    L    +  E    +V   + +++I    G    
Sbjct: 450 -PTVADVIEPMRRQAAQAVANNDPQRALNILQQARERQPSNVWVKLDMARILQSQGQ--T 506

Query: 344 AHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384
           A A++++A    P      L  A +  + + N          
Sbjct: 507 AQAQSIMAPSARPGASSADLYAAALFASETKNWSTANALLSR 548


>gi|317485897|ref|ZP_07944756.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
 gi|316922819|gb|EFV44046.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
          Length = 803

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 2/78 (2%)

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANS 372
                 ++  S      ++++AL +G  DQA      A+   PR      L+A +     
Sbjct: 694 FESAAALDTGSPLPYRHLARLALRLGKADQAREHLHQALLRNPRDVAALSLMADLYLDGG 753

Query: 373 HNTDKILYWTQSALHAMP 390
            + +           A+ 
Sbjct: 754 EDPELAES-LARQSVALR 770



 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 7/199 (3%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             G+   +      AR+      Q+ T  +  L Y L   +  +      A E     ++
Sbjct: 608 SLGVCLASLGRHAEARRFFEEAIQR-TPDDPALAYNLGA-VCQSLHDNEAAAEHFRTCIR 665

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +  +  +A+  L         L  A+     A  +   +P     + +  +   +  +A 
Sbjct: 666 LSPSHLYALIRLGQLDEAEERLEEARARFESAAALDTGSPLPYRHLARLALRLGKADQAR 725

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAA 267
             L+Q               L   +    D G D   +   A +S+ L        +  +
Sbjct: 726 EHLHQALLRNP----RDVAALSLMADLYLDGGEDPELAESLARQSVALRPEYRNGWLVLS 781

Query: 268 KSLISQNKKRKAEVILEKI 286
           ++L  Q +   A   L K 
Sbjct: 782 RALEVQGRLSDAREALLKA 800



 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 24/223 (10%), Positives = 54/223 (24%), Gaps = 38/223 (17%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            ++  A    E  +Q         Y+L      + D  +A  +    + +SP   +    
Sbjct: 617 GRHAEARRFFEEAIQRTPDDPALAYNLGAVCQSLHDNEAAAEHFRTCIRLSPSHLYALIR 676

Query: 194 VVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           + Q     +    A                           +      G    +     +
Sbjct: 677 LGQLDEAEERLEEARARFESAAALDTGSPLPYRH------LARLALRLGKADQAREHLHQ 730

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +L      + A    A   +   +                 PE+A               
Sbjct: 731 ALLRNPRDVAALSLMADLYLDGGED----------------PELAE-------------- 760

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             A +   +  E     +++S+     G +  A    + A ++
Sbjct: 761 SLARQSVALRPEYRNGWLVLSRALEVQGRLSDAREALLKAGEL 803


>gi|268317778|ref|YP_003291497.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262335312|gb|ACY49109.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 711

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 39/106 (36%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             LLE +    +  Y  A +  E +L+   +  +A+         +G L+ A     +AL
Sbjct: 7   TRLLEGEDLFLKGAYPQALQTFEAVLEEDPSNPYALNDAGLAYAELGQLDRAVECFERAL 66

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
              P        ++ Q +   ++  A+    + ++   +  + R  
Sbjct: 67  QADPGHENAFFNLIDQLLRYNQFDLAVETFLRYQEAIPDSEQKRKY 112


>gi|218899564|ref|YP_002447975.1| TPR domain protein [Bacillus cereus G9842]
 gi|228902923|ref|ZP_04067064.1| TPR domain protein [Bacillus thuringiensis IBL 4222]
 gi|228967470|ref|ZP_04128499.1| TPR domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|218543720|gb|ACK96114.1| TPR domain protein [Bacillus cereus G9842]
 gi|228792247|gb|EEM39820.1| TPR domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856707|gb|EEN01226.1| TPR domain protein [Bacillus thuringiensis IBL 4222]
          Length = 219

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|153006901|ref|YP_001381226.1| protein kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152030474|gb|ABS28242.1| protein kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 863

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 6/115 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G    A     +AL + P   WV   ++     A  W  A+    +            
Sbjct: 503 RFGGRERAVELYDRALVLDPGQCWVAGRLIGALRDAGRWDEAMEVARRAASVNPIAENVG 562

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            + L+        +     +   A ++L+       A++ +A +L       +AE
Sbjct: 563 TLALLQ------AREHRTEAVETARQALRAEREPGEAALVSACALGLAGHVEEAE 611


>gi|329893837|ref|ZP_08269908.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088]
 gi|328923436|gb|EGG30751.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088]
          Length = 698

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 54/216 (25%), Gaps = 31/216 (14%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLN-------S 172
           V L   Q                        R  A   L    +   +GD         +
Sbjct: 486 VNLSTAQAQQLR-------------TLDTEYRAIAERHLDQAEQHLSLGDYETRQGNIEA 532

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A R    AL  +P               +     AI  L +      +       L  A 
Sbjct: 533 ALRRYQTALTKNPQLLAAYINKADVEANSGNNQEAINTLERGLTQIADNPD----LAFAL 588

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKV 289
            L +    D          + K    S       A +L  Q K   A   L  +   W  
Sbjct: 589 GLAHIRNQDYRQGLTQLASAAKA--ESARYRYTYAIALHGQGKLHDAIRTLRGVSRKWPN 646

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           N     A +     +++T   L+   +L E+   + 
Sbjct: 647 NEEALQALVQFAAEADDTRTALEAVRQLTELAPNNR 682


>gi|288958255|ref|YP_003448596.1| methyltransferase [Azospirillum sp. B510]
 gi|288910563|dbj|BAI72052.1| methyltransferase [Azospirillum sp. B510]
          Length = 450

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 10/216 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D   A R    A+   P       A+ +     +  S                   R  L
Sbjct: 31  DHVGAARAFRVAVTTDPRNGEAWSALAEAGGAEEPASHVAACFQHAVILDPGNWTWR--L 88

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           ++A +L    + D   +   A+ + +   +S  A +  A+ L +  +  +A     +   
Sbjct: 89  MLADALRQCGEIDAAYALFRALAADRS--DSAPARLGLARCLGALGRPEEALEEYREAVA 146

Query: 289 VNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           + P      +A       S + +  ++    L    +E+      + +  L +    +A 
Sbjct: 147 LRPSDSESVLALAEALTASGDALAAVELLQPLSRQFEEAASVHHALGRCWLALREPVKAL 206

Query: 346 AKAMLA---MKIAPRKEIFLLLAQIEQANSHNTDKI 378
           A    A    +      I  L+A +E     +    
Sbjct: 207 AALRHARDIAEGDEAAAIDRLIAALEAGEGADLSAA 242



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 55/189 (29%), Gaps = 22/189 (11%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L+         + + A+     +    +    A   L      +G    A     +A+ 
Sbjct: 87  RLMLADALRQCGEIDAAYALFRALAADRSDSAPARLGLARCLGALGRPEEALEEYREAVA 146

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGD 241
           + P       A+ +    + +   A+  L    ++  +  + + A+     +L       
Sbjct: 147 LRPSDSESVLALAEALTASGDALAAVELLQPLSRQFEEAASVHHALGRCWLAL------- 199

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
                  A+ +L+   +            I++  +  A   L    +     +++  Y  
Sbjct: 200 --REPVKALAALRHARD------------IAEGDEAAAIDRLIAALEAGEGADLSAAYVR 245

Query: 302 LLSENTVGK 310
            L +    +
Sbjct: 246 ALFDRYADR 254


>gi|312116240|ref|YP_004013836.1| cytochrome C family protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311221369|gb|ADP72737.1| cytochrome C family protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 768

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 58/185 (31%), Gaps = 9/185 (4%)

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L+    +     R  A  L+A +          ++  + +E+ +L      +++    
Sbjct: 533 RLLSPVMGDPARAVRTEAARLLASANPAERSEPFRSALKEWVEAEQLASERPESALNLGV 592

Query: 269 SLISQNKKRKAEVILEKIWKVNP-----HPEIANIY-THLLSENTVGKLKRALRLEEINK 322
                    KAE  L    + +P        +A++Y     +      L+++        
Sbjct: 593 LWAELGDAEKAEATLRSAIEEDPSFTAGAITLADLYRAEGRNGEAEQVLRKS---AAAAP 649

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
            + ++   ++   +  G   +A  +   A  ++P +  F     +      +    +   
Sbjct: 650 RAGDARYALALTLIRQGRRAEARTELERAATLSPEEPRFAYAYGLALWEDGDRALAIDIW 709

Query: 383 QSALH 387
           Q A  
Sbjct: 710 QKASR 714


>gi|197105773|ref|YP_002131150.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
 gi|196479193|gb|ACG78721.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
          Length = 305

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 33/220 (15%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKK----- 216
              G  N A  Y  +     P + W   +++     +  + ++  AI   ++  +     
Sbjct: 51  LDRGLWNQAINYFQEVERQHPYSEWSRRSILMQAYAHYQSNDYPEAIGDADRFIQLYPGN 110

Query: 217 -NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQ 273
             A   +  +AI    +     D G   A+   A+E+L+       AS  A  A+  I  
Sbjct: 111 PAAAYAHYIKAICYFEQ---IVDVGRDQAATGQALEALRAVVQRYPASEYAQDARLKIDM 167

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESVESLVI 330
              + A   +           +   Y  L + +T+  + R   +    +    + E+L  
Sbjct: 168 VNDQLAGKEMT----------VGRWY--LRNGDTLAAVNRFKTVVDRYQTTTHTPEALYR 215

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP----RKEIFLLLAQ 366
           + +  L +G  ++A     +     P     ++ + LL  
Sbjct: 216 LVEAYLTLGLTEEAKRNGAVLGYNYPGDPWYRDAYRLLTD 255


>gi|222056065|ref|YP_002538427.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221565354|gb|ACM21326.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 599

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 9/164 (5%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPAT 152
           + A N     K       +   +       L  Q  L     Q   A  K    L+    
Sbjct: 419 LNAGNKD--NKAAMAAFTEAARNKPDYAPALYAQGVLLDQSGQKKEAAAKYRAALEKSEN 476

Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
              A+ +L    +   G L+ A+R A +A  + P  P V E +    +   +   A+  L
Sbjct: 477 YVQALNNLACLYADGYGSLSEAERLAMRAYKLQPSNPAVMETLGYVLLKNGQKPHALELL 536

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            +  +        +  L    +L   + G+ + +     ++L+L
Sbjct: 537 QKAAERLPNNGYAQYHL----ALALMETGNEVQAGLKLKKALQL 576



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 57/188 (30%), Gaps = 16/188 (8%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +       AI  L    +   E+   R       +L          +  + ++ L+   
Sbjct: 32  QIGKGNAGGAIVLLKNALEKDPEYLSAR----YQLALAYVKANKHEQAEKEFLQVLEQNP 87

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLK 312
                 +  A+   +  K  +A   +E+  K N         I   Y    +     +  
Sbjct: 88  AKSTVHLDLARLYNTMGKPEQARAEVEEYLKSNGRTAEALGLIGESYALQKNLEQAERY- 146

Query: 313 RALRLEEINKESVES--LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369
               L+ +  ++  +   + ++ I +      +A  +    + + P+      L+A +E 
Sbjct: 147 ---LLQSMQGDTKNTGVKLALAGIYMAWRKHPEARRQLEETLAMEPKNSKACYLMAALEN 203

Query: 370 ANSHNTDK 377
              ++   
Sbjct: 204 TMGNSDRA 211



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 15/192 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-- 191
              + A E  + +         A Y +        D+  A++ A   +   PD    +  
Sbjct: 206 GNSDRALELYQQIAGFDKADPVAPYKMGLVYLDKHDVEKARKLAAYLVKTFPDKGEGSRL 265

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           + +VQ Y     ++ AI  L +  K          + L          G++  +      
Sbjct: 266 QGLVQYYTKN--YTEAIALLQESLKKQPSMEGYYFLGLSLYC-----HGELENALSQFRR 318

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY-THLLSE 305
            +    + + A +  +  L+ Q +   A   + K+ +++P     H  +   Y    ++E
Sbjct: 319 IIDYNPSFVQARVLNSLILLRQGRADDAIGEIRKVLQIDPGHAFAHNVLGRGYLAKGMNE 378

Query: 306 NTVGKLKRALRL 317
             V +LK A  L
Sbjct: 379 EGVRELKAATGL 390



 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 71/240 (29%), Gaps = 21/240 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK---------- 214
            R G  + A     K L I P   +    + + Y+        +  L             
Sbjct: 338 LRQGRADDAIGEIRKVLQIDPGHAFAHNVLGRGYLAKGMNEEGVRELKAATGLGPTATGD 397

Query: 215 -KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K   E ++     L+     NA   D  A+     E+ +   +   A       L   
Sbjct: 398 MLKRGGEGDQWNIETLMILGDLNAGNKDNKAAMAAFTEAARNKPDYAPALYAQGVLLDQS 457

Query: 274 NKKRKAEVILEKIWK-----VNPHPEIANIYTHLLSE-NTVGKLK-RALRLEEINKESVE 326
            +K++A        +     V     +A +Y       +   +L  RA +L+  N   +E
Sbjct: 458 GQKKEAAAKYRAALEKSENYVQALNNLACLYADGYGSLSEAERLAMRAYKLQPSNPAVME 517

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           +   +  + L+ G    A      A +  P          +    + N  +     + AL
Sbjct: 518 T---LGYVLLKNGQKPHALELLQKAAERLPNNGYAQYHLALALMETGNEVQAGLKLKKAL 574


>gi|62089254|dbj|BAD93071.1| DnaJ (Hsp40) homolog, subfamily C, member 7 variant [Homo sapiens]
          Length = 483

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 168 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 225

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 226 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 285

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 286 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 345

Query: 289 VN 290
             
Sbjct: 346 TE 347


>gi|109898893|ref|YP_662148.1| response regulator receiver protein [Pseudoalteromonas atlantica
           T6c]
 gi|109701174|gb|ABG41094.1| response regulator receiver protein [Pseudoalteromonas atlantica
           T6c]
          Length = 547

 Score = 40.3 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 54/150 (36%), Gaps = 10/150 (6%)

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLIS 272
             + +K +++  A+  +  +++  +  D IA+     +   +            A+    
Sbjct: 120 NLRLSKAYHKRIALRSVYDAMQKNNTPDAIAACRKLIMSGTRYAKT---CCRLLAELYWK 176

Query: 273 QNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
             +  +A+ +L  +    P P     +A    +L + +    +  A  +   N    E+ 
Sbjct: 177 AGEYSQAKHMLTPLLAQKPQPWVSIALAKTDMYLTNYDAA--IALAQDVSLRNPMLFEAQ 234

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            I+++  L       A      A++IAP  
Sbjct: 235 DILAQCYLLQHDYPSALIAIERAIEIAPYS 264


>gi|330824210|ref|YP_004387513.1| ParB domain-containing protein nuclease [Alicycliphilus
           denitrificans K601]
 gi|329309582|gb|AEB83997.1| ParB domain protein nuclease [Alicycliphilus denitrificans K601]
          Length = 683

 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            TR   + +   E+C   D   A++   +   +  +     +A+       +E + AI  
Sbjct: 329 ETRLEKIDAELEEACDAEDEAKAEKLEQRRDQVVGELQDAEDALHGYAPDVREVAGAIVT 388

Query: 211 LNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +++  +        R A     R+LE   +G        A +  +  D++  A+  + + 
Sbjct: 389 IDRNGEAVIHRGLLREAEAKALRTLEKLRRGFGSTEGEAANDEHEDADDAPKAASLSDRL 448

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-----------KLKRALRLE 318
               +  R A + +E     +PH  +A +   ++                  LK   RLE
Sbjct: 449 AQWLSAHRTAALQIEVA--RHPHVALAALVHGMVQTVLQESHYGHDLPLGVSLKVQDRLE 506

Query: 319 EINKESVESLVIVSKIAL---EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
            +  +  ES   V+   L      ++ + +A+   A+   P+ E+  LLA
Sbjct: 507 GMAPDWPESPAAVALRELQQVAGEALPEDNAELFAALLAKPQDELVRLLA 556


>gi|297623488|ref|YP_003704922.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix
           DSM 17093]
 gi|297164668|gb|ADI14379.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
           17093]
          Length = 1025

 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 49/249 (19%)

Query: 127 VQIALAERQYNIAHEKLEMM------LQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            +  ++  Q++ A    EM+      L+ P  +  A   L   +   GD   A     +A
Sbjct: 486 ARAHMSLGQFSAAARAFEMVQRVGDELRDPYFKALATRGLAAHAEYTGDTQRALLLNQQA 545

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           L       W      +    + + + A+  L                      L   + G
Sbjct: 546 LGF-----W------EACGNSYQITGALNSL----------------AACYYDLGELEAG 578

Query: 241 DMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
                   ++    L  +     +       L++  +  +A    E     +P    A+ 
Sbjct: 579 LSAGLRALSLW-NDLALDESPVLLHCTLGDLLLALGRPEEAARHFEAALHGSPTDAFAHA 637

Query: 299 YT--------HLLSENTVGK--LKRALRLEEINKESV-ES--LVIVSKIALEMGSIDQAH 345
           Y          L       K   +RAL L   +     E     +++++A   G+  +A 
Sbjct: 638 YALVGRGRLFSLEGGEARAKTYAERALELALAHGFRFCEGLARTLLAQLAALQGARAEAA 697

Query: 346 AKAMLAMKI 354
            +   A ++
Sbjct: 698 EQLGAAERL 706


>gi|187939572|gb|ACD38718.1| tetratricopeptide repeat protein [Pseudomonas aeruginosa]
          Length = 502

 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 53/191 (27%), Gaps = 15/191 (7%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +  + D   A R +  A  + P    +             W RAI      +       R
Sbjct: 279 APSLNDPVRAVRLSA-AYALLPAIAELG-------THGTAWRRAIDEYEGAQ----LVQR 326

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            RA   +  +      G          E+L+   +   A +   + L +  +  +A  +L
Sbjct: 327 ERAEANLNLANLYRADGRSGLVEASLREALRRDADFAPARVALGQWLENAGRDSEAVTLL 386

Query: 284 EKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            +  +  P   +   A     +         +          ++     +++    E G 
Sbjct: 387 HEGIRRQPQSGLLHYARGLALIRQGKREAARQALAEALAAEPDNPRYPYVLAVAWHETGQ 446

Query: 341 IDQAHAKAMLA 351
            D+A       
Sbjct: 447 PDKAIETLRAL 457


>gi|94267075|ref|ZP_01290714.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93452212|gb|EAT02868.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 212

 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 8/163 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             + + A  +LE  LQ+    +  + +L       GDL  A     +A+ + P+      
Sbjct: 42  AGRIDEAIARLEKCLQLDEHAKEPLINLGAIYFEQGDLERALEANRRAVKVMPELAQAHT 101

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +        +++ A+    Q  ++       +    +  +      G+   +   A E+
Sbjct: 102 NIGLILQQQGKFAEAVAAYEQALQHDP----KQVNAWVNMATTQIADGNFELAAKAAREA 157

Query: 253 LKLCDNSIMA--SICAAKSLISQNKKRK--AEVILEKIWKVNP 291
           +KL     MA  ++  A     Q ++ K  A+   E  ++V+P
Sbjct: 158 IKLEPQFGMAHNNLAVALFYQQQYQEAKEAADKARELGYQVDP 200


>gi|12853191|dbj|BAB29674.1| unnamed protein product [Mus musculus]
          Length = 1314

 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%)

Query: 135  QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             Y  A      +L+        +  L     R G L  A  +   A  +S   P      
Sbjct: 966  NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024

Query: 195  VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               Y          + + A+ FLN+ +K++         L     ++     D      +
Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077

Query: 249  AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306
            A ESL    NS      A++    Q+  R AE +L + +   PH E              
Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128

Query: 307  TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357
               + K          + + +  K+S+ +L+ +++  + +  + +A  +     K+    
Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188

Query: 358  ------KEIFLLLAQIEQANSHNTDKILYWTQS 384
                  ++ +LLLA I        D  L   + 
Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220


>gi|26325882|dbj|BAC26695.1| unnamed protein product [Mus musculus]
          Length = 1314

 Score = 40.3 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%)

Query: 135  QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             Y  A      +L+        +  L     R G L  A  +   A  +S   P      
Sbjct: 966  NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024

Query: 195  VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               Y          + + A+ FLN+ +K++         L     ++     D      +
Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077

Query: 249  AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306
            A ESL    NS      A++    Q+  R AE +L + +   PH E              
Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128

Query: 307  TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357
               + K          + + +  K+S+ +L+ +++  + +  + +A  +     K+    
Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188

Query: 358  ------KEIFLLLAQIEQANSHNTDKILYWTQS 384
                  ++ +LLLA I        D  L   + 
Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220


>gi|313200841|ref|YP_004039499.1| hypothetical protein MPQ_1099 [Methylovorus sp. MP688]
 gi|312440157|gb|ADQ84263.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
          Length = 566

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 67/257 (26%), Gaps = 26/257 (10%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF-AVYSLYFESC 165
               Q      + L+ LL             A      ML+  P T     V  +  ES 
Sbjct: 6   QQARQPGQSEMQALIGLLNA------GHMPQAEATARSMLRQYPQTLMLHNVLGIALESQ 59

Query: 166 RIGDLNSAQRYATKALDISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           +     +A      A+ + P    +      V+           AI    +      +  
Sbjct: 60  QKYADAAASY--RSAIALEPKIAEIHFNLGVVLGHL---GRMDEAIASYRKAISLKPDL- 113

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A+            G    +     ++  +      A       L  Q K   A   
Sbjct: 114 ---AVAYFNLGFALQTLGRYEEAIPSYRKAAAMQPTFYEAHGNLGTVLQKQGKMEDAIAS 170

Query: 283 LEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             K  +++  P     +A              +        +  + V++   + +   + 
Sbjct: 171 YRKALEIHADPRGYFNLATALRD--HGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQ 228

Query: 339 GSIDQAHAKAMLAMKIA 355
           G++D+A      A+ + 
Sbjct: 229 GNMDEAVKAYQHALSLD 245


>gi|296804964|ref|XP_002843309.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480]
 gi|238845911|gb|EEQ35573.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480]
          Length = 520

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/277 (10%), Positives = 75/277 (27%), Gaps = 38/277 (13%)

Query: 107 HSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFE 163
            + +       +  +  LL   +  LA      A    +  +    +    +        
Sbjct: 18  ANGLQASDIPPDTPVSSLLSSAKTHLANGSPKDALLYFDAAITKDPSNYLTIFQRG--AA 75

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
              +G  + A     + L + P          +  + +  W+ A   L       K    
Sbjct: 76  YLSLGRHSRAAEDFNQVLKLKPGFEGALLQRGKLRMRSGNWTGAKEDLEA---TGKPGEA 132

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L  A++     + +       A      C +    +I  A       + R      
Sbjct: 133 ELAQLHEAQAAVAHAE-EADKKQDWAT-----CVSQSSVAIMKAMGSAELRRLR------ 180

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSID 342
                       A  Y  L   +    +    RL +++   V+  + + + +       +
Sbjct: 181 ------------AKCY--LERGDIQEAINDLTRLTQLSPNVVQPHLQISAMLFYSQADTE 226

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           +   +    +   P  ++     ++ +    N+ +I 
Sbjct: 227 RGMDQIRKCLHSDPDSKVCS---RLFRGEKRNSKQIK 260


>gi|163794033|ref|ZP_02188006.1| hypothetical protein BAL199_01429 [alpha proteobacterium BAL199]
 gi|159180647|gb|EDP65166.1| hypothetical protein BAL199_01429 [alpha proteobacterium BAL199]
          Length = 935

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 9/166 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           +E Q          A    E  L        + + L F   ++G+   A  +   ++ ++
Sbjct: 8   IEAQARYRAGDLLGAKVLFESALADDPNHWASRHDLGFLLRQLGERAGAFHHIRASIALA 67

Query: 185 PDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           P+    W T  ++     A  +  A   +++ +  A         L+    L + D+   
Sbjct: 68  PEHAVGWTTAGLLSG--DAGSFQTARRSIDRARLIAPT---EPTALIAQADLADDDECPT 122

Query: 243 IASYHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVILEKI 286
            A+   A        + + A +  A  + L      ++    +   
Sbjct: 123 FAAQLSARLRQSGLPDRLRARLLHALGRVLDRLGDTQQGFAAVSAA 168



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 12/211 (5%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
               +     L    A  + Q+ +A   L    +          +L     R+G+  +A 
Sbjct: 497 LLAADPRSLFLAAASAERQSQWMLARTFLRSAARAAPGVAAIYTNLAVAHGRLGETAAAT 556

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               +AL ++P+AP    + +  ++   +W RA        + A         L +   +
Sbjct: 557 DALRRALSLTPNAPEAA-SNLGNFLAPHDWPRA----ATSHRRATMLTPADPGLYVNLGM 611

Query: 235 ENADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291
               +   + +   A+  ++ L   S  A +       +      A   L+++    P  
Sbjct: 612 TLMREAAAVPATERALHRAIALDPTSQSAGLSLYHLESATEHPEVALTRLDRLRCAQPTV 671

Query: 292 ---HPEIANIYTHL-LSENTVGKLKRALRLE 318
              H E            +    L+RA+ L 
Sbjct: 672 GEVHYERGCALRDANRDHDAADSLRRAIVLA 702


>gi|225543311|ref|NP_083011.2| tetratricopeptide repeat protein 21A [Mus musculus]
 gi|150416165|sp|Q8C0S4|TT21A_MOUSE RecName: Full=Tetratricopeptide repeat protein 21A; Short=TPR repeat
            protein 21A; AltName: Full=Tetratricopeptide
            repeat-containing hedgehog modulator 2
          Length = 1314

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%)

Query: 135  QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             Y  A      +L+        +  L     R G L  A  +   A  +S   P      
Sbjct: 966  NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024

Query: 195  VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               Y          + + A+ FLN+ +K++         L     ++     D      +
Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077

Query: 249  AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306
            A ESL    NS      A++    Q+  R AE +L + +   PH E              
Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128

Query: 307  TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357
               + K          + + +  K+S+ +L+ +++  + +  + +A  +     K+    
Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188

Query: 358  ------KEIFLLLAQIEQANSHNTDKILYWTQS 384
                  ++ +LLLA I        D  L   + 
Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220


>gi|148658699|ref|YP_001278904.1| hypothetical protein RoseRS_4623 [Roseiflexus sp. RS-1]
 gi|148570809|gb|ABQ92954.1| hypothetical protein RoseRS_4623 [Roseiflexus sp. RS-1]
          Length = 336

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 39/196 (19%)

Query: 252 SLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
           S  +  +   ++A   AA   I    K + + +L +  ++NPH E+A ++   L E    
Sbjct: 2   SHSVSPDVHRLVADAIAA---IRSGDKARGQKLLMQALRINPHHEVAWLWMASLVETPER 58

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           + +   R   IN  + E+    ++ AL   S  Q            P++ +      ++Q
Sbjct: 59  RRECLERALAINPHN-ET----ARRALRALSEPQP-------PHATPQQHV----DALDQ 102

Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT-------LCYFEWKI 422
               +   +    Q+A  A        DD           P            C F  K 
Sbjct: 103 TFHSSPTSVHEHVQTATQANR----TQDDQARH------CPHCGAPLETTATFCAFC-KS 151

Query: 423 PTKSPEYISSENINFS 438
           P        + +++ +
Sbjct: 152 PVAPHPASDAPSLSLT 167


>gi|67626016|gb|AAY78492.1| tetratricopeptide repeat-containing hedgehog modulator 2 [Mus
            musculus]
 gi|126632017|gb|AAI33700.1| Tetratricopeptide repeat domain 21A [Mus musculus]
          Length = 1314

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%)

Query: 135  QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             Y  A      +L+        +  L     R G L  A  +   A  +S   P      
Sbjct: 966  NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024

Query: 195  VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               Y          + + A+ FLN+ +K++         L     ++     D      +
Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077

Query: 249  AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306
            A ESL    NS      A++    Q+  R AE +L + +   PH E              
Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128

Query: 307  TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357
               + K          + + +  K+S+ +L+ +++  + +  + +A  +     K+    
Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188

Query: 358  ------KEIFLLLAQIEQANSHNTDKILYWTQS 384
                  ++ +LLLA I        D  L   + 
Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220


>gi|50417750|gb|AAH77978.1| LOC446236 protein [Xenopus laevis]
          Length = 938

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 12/231 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS---AQRYATKALDISPDAPWV 190
            + + A       L +  T   A+  L        + +S     +  +KA  I P  P V
Sbjct: 212 NKLDKARLAFGRALDLNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMV 271

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   +   K++S+ +  L     +  E    +A      +     + D   ++    
Sbjct: 272 LNHLANHFFFKKDYSK-VQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYY 330

Query: 251 ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304
           ++ +    + ++      +  I +  K  A    EK+ K  P+       + ++Y     
Sbjct: 331 QATQFAAASFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDD 390

Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +      K    ++ E   + VE+ + +++I LE   I  A +    A +I
Sbjct: 391 QEKRDIAKSHLKKVTEQYPDDVEAWIELAQI-LEQTDIQNALSAYGTATRI 440


>gi|52141112|ref|YP_085717.1| TPR repeat-containing protein [Bacillus cereus E33L]
 gi|51974581|gb|AAU16131.1| TPR domain protein (tetratricopeptide repeat family protein)
           [Bacillus cereus E33L]
          Length = 219

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQVGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|34540757|ref|NP_905236.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
 gi|34397071|gb|AAQ66135.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 670

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 63/202 (31%), Gaps = 17/202 (8%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER---QYNIAHEKL-EMMLQIPA- 151
            H+   A   +          +      L       +     Y+ A       +   P  
Sbjct: 400 CHDYDRAEAYYKRA----LEADPNHANTLGNYALFLKDVRHDYDQAEAYYKRALAADPNH 455

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITF 210
                 Y+ +  + R  D + A+ Y  KAL+  P+                 ++ +A  +
Sbjct: 456 ANNLGNYANFLYNIRC-DYDQAETYYKKALEADPNHANTLGNYANFLCDIRHDYDQAEGY 514

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKS 269
             +      E +   AI L   +L   D            + +L++   S       A  
Sbjct: 515 YKKAL----EADPKNAITLGNYALFLNDIRHAYDQAEAYYKRALEVDPKSANKLGNYAHF 570

Query: 270 LIS-QNKKRKAEVILEKIWKVN 290
           LI+ +   ++A+ ++++ ++  
Sbjct: 571 LITCRGDFKRADSLIQQAFENA 592


>gi|116622596|ref|YP_824752.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225758|gb|ABJ84467.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 375

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 69/203 (33%), Gaps = 11/203 (5%)

Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L   +    + GD+  A       L  SP+       +      +  +  A T   +K  
Sbjct: 30  LLRHAIELHQAGDIPGAIEEYRAFLKQSPNNVMARSNLGAALSKSGRYEEA-TVEYRKAL 88

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           + +  N    + L   +L       +  +  +  +++K    +  A    A   +   + 
Sbjct: 89  DLEPRNLPVRVNL---ALAYYKTAQIADAAEELTKAVKQGPPNRQAIFLLADCDLRLGEN 145

Query: 277 RKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           +K   +L  + K +P+ + A +Y     L+ +N   + +  +       ES E+ +++  
Sbjct: 146 KKVIELLSPLEKESPN-DKALVYLLGTALIRDNQPARGQLLVDRILREGESAEAHLLLGT 204

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
             +       A      A  + P
Sbjct: 205 TKMNAQEFAGALVDLKKAADLNP 227


>gi|301310686|ref|ZP_07216625.1| TPR domain protein [Bacteroides sp. 20_3]
 gi|300832260|gb|EFK62891.1| TPR domain protein [Bacteroides sp. 20_3]
          Length = 707

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  +S      + A     K L+  P+   +   +   ++  K+++ A    +    +
Sbjct: 97  RGIARQSQEK--YDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFD----D 150

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               +   ++  + R     +KGD + +  D  +++++      A    A      +  +
Sbjct: 151 LMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYK 210

Query: 278 KAEVILEKI 286
            A   L + 
Sbjct: 211 DALADLNEA 219


>gi|239997002|ref|ZP_04717526.1| Response regulator with TPR repeat [Alteromonas macleodii ATCC
           27126]
          Length = 546

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 66/173 (38%), Gaps = 14/173 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESC-RIGDLNSAQRYA 177
           +L +    + + + N A + +E +L  P+            L  E   RI   + A    
Sbjct: 132 FLQQAFSLVEQGEINSAIDHIEALLDAPSH----YKGHCEQLLVELYWRIKQPDKALDVL 187

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
              +D  P   W   A+ + Y+L KE+ +AI    +  K  +      A  ++A++ +  
Sbjct: 188 RDYIDGKPVL-WAQIAIGKTYLLLKEYEKAILIAKRTLKRNRF--NADAHDILAQAHQAT 244

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
             GD   +     E++KL   S+     A +     +    A    + IW ++
Sbjct: 245 TSGD--RALDAIKEAIKLSPYSLPRHFKACEIGRQNDDLVLAASSSQAIWDLS 295


>gi|149923302|ref|ZP_01911711.1| TPR repeat [Plesiocystis pacifica SIR-1]
 gi|149815842|gb|EDM75363.1| TPR repeat [Plesiocystis pacifica SIR-1]
          Length = 271

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 11/174 (6%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +     E    L E    L   +   A  + + +L   A     +  L   +    D   
Sbjct: 26  EIDIDAEIARNLEEAASNLRNNKVEEAKGQYQWVLDQDADNVGGLTGLGKVALAEEDYAG 85

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     KA+  S +      ++ + +   K+W++A   L +      E ++N+    +  
Sbjct: 86  AVGPLEKAVAASGEDTDARVSLGRAHAGTKDWAKAAEHLGKAW----ELDQNQEQYGLEY 141

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +   + GD   +     E  ++                   +   A   L+K 
Sbjct: 142 GVALRESGDAAKAIEVLTEVSEINPKL-------KYVYRELGRAHHAAKDLDKA 188


>gi|118593464|ref|ZP_01550844.1| hypothetical protein SIAM614_16932 [Stappia aggregata IAM 12614]
 gi|118433943|gb|EAV40601.1| hypothetical protein SIAM614_16932 [Stappia aggregata IAM 12614]
          Length = 560

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 78/254 (30%), Gaps = 30/254 (11%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
               E LV+           +  IA    E +L++      A +SL   + + GD+  A 
Sbjct: 7   LLVKEALVH-------QHAGRIGIALGMFEEILKLDPKNPQANFSLGIAAYQNGDVGLAI 59

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               KA   +   P V + +    + A + + A+  L +    A       A L    +L
Sbjct: 60  EMLRKAERKAGKHPQVHQLLGLALMNAGDLAGAMKSLKKAVVLAPNVADFHAHLGDLYTL 119

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
               K     +      +L +   +  A +   K  ++  +   A    EK         
Sbjct: 120 ----KRQPQLARQSFQRALAVDPENGYAIVGMGKLDVTVGRVDDAIGWFEKAIA------ 169

Query: 295 IANIYTHLLSENTVGK--------LKRALRLEEINKESVESLV-----IVSKIALEMGSI 341
           +       L   T+ +        L++   L E      E  +        KI  ++G  
Sbjct: 170 LGKELPSALHSLTMTRTYRQVPAELEKIENLLEEASTLPEPELAHLHWAAGKIHYDLGDT 229

Query: 342 DQAHAKAMLAMKIA 355
             A      A ++ 
Sbjct: 230 PSAAQHYRAARRLR 243


>gi|221068914|ref|ZP_03545019.1| Tetratricopeptide domain protein [Comamonas testosteroni KF-1]
 gi|220713937|gb|EED69305.1| Tetratricopeptide domain protein [Comamonas testosteroni KF-1]
          Length = 595

 Score = 40.3 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 66/218 (30%), Gaps = 15/218 (6%)

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           P  R      L  +       N  Q    +A    P+ P     +    +   E   A  
Sbjct: 266 PQLRLTYTRVLLGQKRNADAKNQLQLITREA----PEFPEAWAMLANLQLQDNELDAADV 321

Query: 210 FLNQ------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            L Q      K       +   + L + R+ + A+K          ++ +    N +   
Sbjct: 322 SLTQFSSLLPKLPEGVGRSAGESQLYLLRA-DLAEKRQRYDEADIYLQRIPDSANLLSVQ 380

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGKLKRALRLEE 319
              A  L  Q K ++A  +++ I    P+     +IA +     +           +L  
Sbjct: 381 ARRADLLARQGKVKEARALIQAIPANGPNQKRLKQIAEVQLLRDAGLNKDAYALQAQLLS 440

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              + VE     + +A   G+  +        +K AP 
Sbjct: 441 QFPDDVELAYDTAMLAERAGNFSEMERLLRDIIKRAPD 478


>gi|209886536|ref|YP_002290393.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
 gi|209874732|gb|ACI94528.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
          Length = 267

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 5/155 (3%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +T         +   R+    L +++   A   D   +     E  +     + +++   
Sbjct: 17  LTVAAVALAGCQTAGRDITGSLGSKASVAAPANDPQRAAEVYGEKYRANPKDLDSALRYG 76

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESV 325
           ++L +  ++ +A  +LE+    +P + E+   Y   L+EN   KL     L   +   + 
Sbjct: 77  QALRANGQREQAVAVLEQANLAHPGNREVLGAYGRALAENGNFKLA-FDVLSRAHTPANP 135

Query: 326 ESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRK 358
           +  ++ ++ A+  +MG  D+A      A+KI P +
Sbjct: 136 DWRILSTQGAVLDQMGKPDEARRYYANALKIRPDE 170


>gi|169781742|ref|XP_001825334.1| pre-mRNA-splicing factor clf1 [Aspergillus oryzae RIB40]
 gi|83774076|dbj|BAE64201.1| unnamed protein product [Aspergillus oryzae]
          Length = 670

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 89/275 (32%), Gaps = 32/275 (11%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  + ++P ++   ++  Y    +  GD              +Y  + L 
Sbjct: 257 KEYERARAIYKYALDRLPRSKSVTLHRAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLEN 236
            +P    +     +    + +  R      +        +  + W R   + +     E 
Sbjct: 316 ENPRNYDIWFDFTRLEETSGDPERVRDTYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEE 375

Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +  D+  +     E LKL            +  A+  I Q + + A   L +   + P 
Sbjct: 376 MEAKDVERARQIYNECLKLIPHKKFTFAKIWLMKAQFEIRQMELQTARKTLGQAIGMCPK 435

Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            ++   Y  L     E    +     +  E N  + +S +  +++   +   D+A A   
Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSNSQSWIQFAELERGLDDSDRARAIFE 494

Query: 350 LAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380
           L ++  P     + ++      E+      D++  
Sbjct: 495 LGIEQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527


>gi|87308024|ref|ZP_01090166.1| hypothetical protein DSM3645_20542 [Blastopirellula marina DSM
           3645]
 gi|87289106|gb|EAQ80998.1| hypothetical protein DSM3645_20542 [Blastopirellula marina DSM
           3645]
          Length = 604

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L   + +  D  +A++Y  + L  +P      + +       +  + A+  L  ++ +A 
Sbjct: 110 LAVAALQREDWKAAEKYLNQILAQNPTHRDALKVLANMLRSRERPADAVKLL--QQYHAH 167

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             +     ++  R+L   +  +  A+    + + ++    
Sbjct: 168 FSDDAEITMIYGRAL--LENEETDAAIRSLLAAERIDPKL 205


>gi|261332749|emb|CBH15744.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 466

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 86/220 (39%), Gaps = 28/220 (12%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V  L     R GDL ++ ++  K L ++P +P   + + Q  +L  ++  AI    + ++
Sbjct: 100 VKGLLT--RRSGDLTTSFQHFQKVLTLNPGSPACLQQLAQTSLLLGKFYEAIESFQRAEE 157

Query: 217 N------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                   K+W+    + L    +    K +   ++  +++  +         +  +K L
Sbjct: 158 ARAARGFRKDWSLQYGVGLCYEYMREYRKAE--EAFVSSMQIQRFDCT----VLRLSKVL 211

Query: 271 ISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHL-LSENTVGKLKRALRLEEINKES 324
           + Q +  +A  +LE+    +P +P+    +  +Y  +         L R L L      S
Sbjct: 212 VLQKQHSRAISLLEEAVLGSPDNPDMLTVLGLLYLRVDRPAKAFNYLGRCLIL-----NS 266

Query: 325 VESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIFL 362
            +S   ++  ++  E G    A  K  +A+   P     L
Sbjct: 267 SDSRATMAAASIMQENGEFGVALNKYRVAVPKLP-SSACL 305


>gi|242057585|ref|XP_002457938.1| hypothetical protein SORBIDRAFT_03g022830 [Sorghum bicolor]
 gi|241929913|gb|EES03058.1| hypothetical protein SORBIDRAFT_03g022830 [Sorghum bicolor]
          Length = 781

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 12/147 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--EF 155
                + +     S +     E L  LL    A      + A    + +     T   E 
Sbjct: 570 GEEASSSRTIGISSAEIRTKLEELSALLHQDTAQLVDDSDSAKALFKALRGQIPTDAEEI 629

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-- 213
              + + E+ ++    +AQR A +A         ++E +++  +LA E  ++I  L    
Sbjct: 630 LFKAAHLETRQLQYQKAAQRLADRA-----THAQLSEEMIKVKLLADEKHKSIGILKSSG 684

Query: 214 ---KKKNAKEWNRNRAILLIARSLENA 237
              K+K      +  A+L   + +E A
Sbjct: 685 DVLKQKIFDLSAKREALLAELKQVEEA 711


>gi|227822490|ref|YP_002826462.1| putative adenylate cyclase [Sinorhizobium fredii NGR234]
 gi|227341491|gb|ACP25709.1| putative adenylate cyclase [Sinorhizobium fredii NGR234]
          Length = 590

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 69/233 (29%), Gaps = 29/233 (12%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR--------- 206
            ++ LY     I DL +A++   +A+ + P        +   ++    W           
Sbjct: 342 GLWHLY--KFNIDDLKTAKQLFERAIGLEPTFAQAHARLAYVHIQLG-WYGPLEERAERI 398

Query: 207 --AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             AI    +    A +     A L + R+L     G           +L+L  +      
Sbjct: 399 GDAIRLAERAI--ALDSREPAAHLALGRALAL--GGQPERGIDHLRNALRLDPSFAQGHF 454

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN-----IYTHLLSENTVGKLKRALRLE 318
              ++L    +  +    + + ++++P  P +          H  +      +  A    
Sbjct: 455 ALGQALCYVERPEEGITAINEAFRLSPRDPHLWTFHNMLAIAHYQAGRLAESVAAARASL 514

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
                +    ++++      G   +A       +   P      L A   +A 
Sbjct: 515 RQENVTFWPAMVLAAALGAEGPSVEAGEAVAALLCRRPD-----LTADKARAE 562


>gi|220907964|ref|YP_002483275.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864575|gb|ACL44914.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 210

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 11/150 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                     A       +++  T          L      +GD   A      A+ + P
Sbjct: 69  ALQGAGDLEGAIRSFSEAVKLSGTADNYFA--RGLAL--SDLGDHKQAIADYNVAIRLDP 124

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +            +  ++ + AI  L+Q  K     + +      +R L + + G+   +
Sbjct: 125 NFAAAFYNRGTARLALQDQTGAIADLSQAIK----LDSSFVAAYYSRGLAHYNAGNEKLA 180

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNK 275
             D   +++L      A    ++   +   
Sbjct: 181 RQDYNMAVRLSPGMTSAYYNLSQQYQTGGN 210


>gi|223936189|ref|ZP_03628102.1| type II and III secretion system protein [bacterium Ellin514]
 gi|223895051|gb|EEF61499.1| type II and III secretion system protein [bacterium Ellin514]
          Length = 906

 Score = 40.3 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 72/244 (29%), Gaps = 61/244 (25%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
            P A    S  + +       L   L+  Q A   + Y  A    E              
Sbjct: 27  SPDASTAASEEAVRRAADTRSLRQDLVLAQSAQQRKDYVQAARLYE-------------- 72

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
             Y    RIG   +AQ  A              + V+    +       +   +Q + + 
Sbjct: 73  HCYTLVQRIG--PAAQIQAE-----------TRQVVIGLSAVL------LELAHQAQAHG 113

Query: 219 KEW---NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS------ 269
                  R + +L+I    + A +         A+++ K     + ++   A+       
Sbjct: 114 DYVTADERIKRVLIIDPHNQVALQMAQDNKRLIALQAGK-----VPSAEVLAELPGIHTN 168

Query: 270 -------------LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
                        L    K   AE  LE+ +K +P    A  Y +L+ E   G+  R   
Sbjct: 169 EIRVATLVQDGKVLFEAGKLDAAEAKLEQAYKEDPQSVGAYYYLNLIKEKRNGQAVRRSE 228

Query: 317 LEEI 320
           LE  
Sbjct: 229 LESK 232


>gi|145239345|ref|XP_001392319.1| pre-mRNA-splicing factor clf1 [Aspergillus niger CBS 513.88]
 gi|134076826|emb|CAK39880.1| unnamed protein product [Aspergillus niger]
          Length = 677

 Score = 40.3 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 89/276 (32%), Gaps = 34/276 (12%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  + ++P ++  A++  Y    +  GD              +Y  +  +
Sbjct: 257 KEYERARAIYKYALDRLPRSKSTALHKSYTTFEKQYGDREGVEDVILSKRRVQYEEQLKE 316

Query: 183 ISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-E 235
            S +   W   A +++   + +  R      +              R    L +  ++ E
Sbjct: 317 NSRNYDIWFDFARLEE--TSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWVFYAIWE 374

Query: 236 NADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +  D   +     E LKL            +  A+  I Q   + A   L +   + P
Sbjct: 375 EMEAKDAERARQIYNECLKLIPHKKFTFAKIWLLKAQFEIRQMNLQAARKTLGQAIGMCP 434

Query: 292 HPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
             ++   Y  L     E    +     +  E N  + +S +  +++   +   D+A A  
Sbjct: 435 KDKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSNSQSWIKYAELERGLDDTDRARAIY 493

Query: 349 MLAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380
            L +   P     + ++      E+      D++  
Sbjct: 494 ELGIDQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527


>gi|89054749|ref|YP_510200.1| SARP family transcriptional regulator [Jannaschia sp. CCS1]
 gi|88864298|gb|ABD55175.1| transcriptional regulator, SARP family [Jannaschia sp. CCS1]
          Length = 647

 Score = 40.3 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 1/77 (1%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAK 268
                    +   R   +    ++L+  D + +  A    A   L L  +   A+ CA +
Sbjct: 132 VFEDWLTETRRAVRRHQVAAAEQALDRLDAEANPDAVLACATAILSLDPHHEPAARCAME 191

Query: 269 SLISQNKKRKAEVILEK 285
               Q K+  A  + E 
Sbjct: 192 RYAVQGKRGHALRVFET 208


>gi|71010894|ref|XP_758428.1| hypothetical protein UM02281.1 [Ustilago maydis 521]
 gi|46097983|gb|EAK83216.1| hypothetical protein UM02281.1 [Ustilago maydis 521]
          Length = 926

 Score = 40.3 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +   G +  A+      L + PD P  W     ++Q          I  L +   +  + 
Sbjct: 529 ALEKGCVEVARSILAYTLRVFPDRPAIWTQAVALEQQ--HGSQENVIALLERAVTSCAKA 586

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                 L +A +  + D GD  A+    I +      S   S+ AA+   SQ +   A  
Sbjct: 587 ED----LWLALATVHRDAGDTAAARQTLIRAFDANIGSEKISLAAAQLESSQGQLVAARR 642

Query: 282 ILEKI 286
           +LE+ 
Sbjct: 643 LLERA 647



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 79/264 (29%), Gaps = 12/264 (4%)

Query: 133 ERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA-LDISPDA 187
                 A        +  +        A           G L +A+R   +A +++    
Sbjct: 600 AGDTAAARQTLIRAFDANIGSEKISLAA----AQLESSQGQLVAARRLLERARVEVGSAR 655

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W+  A  ++       S A++ +++      ++ +   +         + +  +  +  
Sbjct: 656 VWMKSAQFER--DHGYTSTALSLIDEALVQFPQFAKLYMMGAQLSQHLFSGEESVKKARE 713

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSEN 306
                ++   N     I AA+         ++  +LE+    NP  P I      +   +
Sbjct: 714 YLGRGIRWSPNCDALWILAARLEACAGLTIRSRALLERARLSNPSSPLIWYESITIELSS 773

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           +     +A  L     + +    ++  +A+ +        K   A++        L    
Sbjct: 774 SPPNPTQARTLLSRALQVLPDSGLLWVLAIALEPRAGRKTKMTDALRKTADDSYVLATVA 833

Query: 367 IEQANSHNTDKILYWTQSALHAMP 390
            +        +   W Q A HA P
Sbjct: 834 QQFWLEGKPAQARKWFQRATHAAP 857


>gi|300904273|ref|ZP_07122132.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|301302910|ref|ZP_07209038.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|300403806|gb|EFJ87344.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|300841845|gb|EFK69605.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|315256571|gb|EFU36539.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1]
          Length = 745

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 170 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 229

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 230 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 284


>gi|37523641|ref|NP_927018.1| serine/threonine kinase [Gloeobacter violaceus PCC 7421]
 gi|35214646|dbj|BAC92013.1| glr4072 [Gloeobacter violaceus PCC 7421]
          Length = 946

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 79/266 (29%), Gaps = 29/266 (10%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFE----SCRIGDLN----SAQRYATKALDISPD 186
             ++A E  +  L +      A   L       + R G        + +   KAL + P+
Sbjct: 591 DNDLAIELFKRALALDPNYALAHAGLGSAYGSKATRYGQEERWEAESLKAIKKALVLDPN 650

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIAS 245
                +A+   Y     + +A+    +  +          A   ++ ++ N ++G   + 
Sbjct: 651 LSQAHKALGSYYYGRGRYRQALASFKRGAELNPSLPVVAGAYGGLSAAMGNLEEGVRWSK 710

Query: 246 YHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--- 301
              A+   +    N  M      +   ++     A  I        P    A  Y     
Sbjct: 711 RSIALNPTRNGYPNLGMIYTILGEDARARRALEAAVSI-------QPDNVYALSYLSTLH 763

Query: 302 -LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-- 358
            L  +    + K A ++   + + V  L          G   +A A     +KI  R   
Sbjct: 764 KLRGQYDEAR-KTAQKILARDPQEVFGLTAAGDAERFAGRWSEAKAHYEKVLKITDRLDG 822

Query: 359 -----EIFLLLAQIEQANSHNTDKIL 379
                +   +LA I +     T    
Sbjct: 823 ESGQLQSTTILADIARREGQPTRAAQ 848


>gi|323170172|gb|EFZ55825.1| tetratricopeptide repeat family protein [Escherichia coli LT-68]
          Length = 885

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 307 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 366

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +   +L   P    V        VL+     A     +  ++
Sbjct: 367 LAARNGNFDAGLDFCQHSLRTCPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 421


>gi|313214288|emb|CBY42728.1| unnamed protein product [Oikopleura dioica]
          Length = 599

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 74/223 (33%), Gaps = 41/223 (18%)

Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           + A  E+QY    E  + ML+      P   +  +        + GD+ SA+    +A +
Sbjct: 373 RAAFLEKQY-GTKESYDNMLERAVKACPREEKLWLMG-AKSKWQQGDIRSARGILEQAFE 430

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------LIARSLE 235
            +  +  +  A V+      E  RA   L + + +A                  +  +++
Sbjct: 431 SNQQSEEIWLAAVKLESENNELLRARQILARARTSASSPRVMMKSAKLEWCLGELKNAIK 490

Query: 236 NADKG----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +D+G                      D  ++     + ++ C +S    I  A    S+
Sbjct: 491 LSDEGLAKYPKFDKLWMMKGTIFLQMKDANSARKAFAKGIENCKDSKPLWILLADLEESE 550

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLL----SENTVGKL 311
             + KA  +LE+    NP  PE+      L           +L
Sbjct: 551 GNQVKARSVLERARLKNPASPELWKRAIELEKRVSGNEIADRL 593



 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 22/225 (9%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D+  A+       + +P  P       +   +    + A   +    +   +  ++  + 
Sbjct: 84  DVRKARLLLKSVRETNPKQPQAWIGSARLEEVVGRLAEARVLI---MQGTDKCPKSEDVW 140

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L A  L  AD+   I +      ++    NS+     AA     +  KR    + ++  +
Sbjct: 141 LEASRLAPADQAKKIFA-----AAVAEIPNSVRIWCAAANLEKEKKAKR---RVYQRALE 192

Query: 289 VNPHP-EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
             P+   +      L   ++    L RA    E    S E  + ++K+     + D A  
Sbjct: 193 NVPNAVRLWKAAVELEEIDDAKELLTRA---VECCPSSAELWLALAKL----ETYDNARK 245

Query: 347 KAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               A    P  K +++  A++E+AN  +    +   + AL A+ 
Sbjct: 246 VLNKARATIPTDKSVWITAAKLEEANGKSERCAIV-IKRALEALR 289


>gi|257458356|ref|ZP_05623504.1| TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257444291|gb|EEV19386.1| TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 664

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 51/187 (27%), Gaps = 37/187 (19%)

Query: 201 AKEWSRAITFLNQKKKNAKEWN-RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            + W  AI    Q  K    +N   R +     +L     G+   +   A  + +     
Sbjct: 35  HENWYGAIELYQQALKENPAYNAVYRGLAECFYAL-----GEYDQAIVYAERARRYSPQD 89

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
           +      A  LI   +  +A+ I                                  +  
Sbjct: 90  VDIENLYAFILIGIGRIEEAQKI-------------------------------FSGILN 118

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
               ++++   +++I +  G +  A      A++        LL   +    + N     
Sbjct: 119 RYPNNLDARFGMAEIEVTGGRLTNASELYAAALRRQSENRKALLSLALLSHETGNMQAAQ 178

Query: 380 YWTQSAL 386
            +   AL
Sbjct: 179 SYISRAL 185


>gi|209527435|ref|ZP_03275940.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492108|gb|EDZ92458.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 520

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 66/233 (28%), Gaps = 22/233 (9%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           ++  + E  E  + I +    A Y        +   + A     +A  + P+        
Sbjct: 286 RWRDSLEAFERAINIQSNFYPAWYGRANALSSLSQYDEAIASYDRATQLQPNFHPAWRDR 345

Query: 195 VQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +       A+   ++  +    ++       L    L N       A+   A    
Sbjct: 346 GALLMSLGRHEEALQAFDRLLQIQPDDYGIWY---LRGNILMNHLDDYPEAARSYARVIN 402

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVIL----------EKIWKVNPHPEIANIYTHLL 303
            +  +   A    A++L       +A   L           + W +        I+  + 
Sbjct: 403 -IKPDFTPAFTAKAQALFRLGDYGEAIAWLDESLHQNSHQREAWVLR-----GQIFMAIQ 456

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                  L    R   ++    +S +  +   L +    +A   A  A++I P
Sbjct: 457 RY--AQALNAYNRAVNLDSNHSQSWLGKAIAYLRLNRDQEAKDAAQRALEINP 507



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/207 (9%), Positives = 61/207 (29%), Gaps = 25/207 (12%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             + W  ++    +       +          R+   +       +      + +L  N 
Sbjct: 283 RHERWRDSLEAFERAINIQSNFYP----AWYGRANALSSLSQYDEAIASYDRATQLQPNF 338

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-----SENTVGKLKRA 314
             A       L+S  +  +A    +++ ++ P  +    Y          ++     +  
Sbjct: 339 HPAWRDRGALLMSLGRHEEALQAFDRLLQIQPD-DYGIWYLRGNILMNHLDDYPEAARSY 397

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLL-----LA--- 365
            R+  I  +   +    ++    +G   +A A    ++     +   ++L     +A   
Sbjct: 398 ARVINIKPDFTPAFTAKAQALFRLGDYGEAIAWLDESLHQNSHQREAWVLRGQIFMAIQR 457

Query: 366 ------QIEQANSHNTDKILYWTQSAL 386
                    +A + +++    W   A+
Sbjct: 458 YAQALNAYNRAVNLDSNHSQSWLGKAI 484


>gi|169832335|ref|YP_001718317.1| TPR repeat-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639179|gb|ACA60685.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 209

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 9/163 (5%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           + +L+       A Y+L     +   L+ A+ +  KA++           +   Y    +
Sbjct: 16  KRILKENEDCATAAYNLGVAMMQQNRLDEAREHFEKAIETGSRMFEAYVNLGYIYFKEGD 75

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
             +      +  +    + R  A L  A  L+ A  G+ I +   A+E   L      A 
Sbjct: 76  MEKVAEVNRKAVELEPRYARGYANLGFAY-LQMAKTGEAIEALQKALE---LNPEIAQAW 131

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301
              A + + +    KA  + E++  + P     H  +A  Y H
Sbjct: 132 NNLANAYLQRGDVDKAIEVGERLIALAPNFGLGHNNLAVAYYH 174


>gi|58583229|ref|YP_202245.1| hypothetical protein XOO3606 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58427823|gb|AAW76860.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 565

 Score = 40.3 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 20/250 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L +A+     
Sbjct: 316 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 375

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 376 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 431

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-- 296
            D+  +  D  + L     ++ A +           + ++A  ++++    +P   +A  
Sbjct: 432 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPD-NLAIV 490

Query: 297 -----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                 +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A
Sbjct: 491 DSYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEA 546

Query: 352 MKIAPRKEIF 361
            ++ P     
Sbjct: 547 RRLDPDNRAL 556


>gi|322490088|emb|CBZ25350.1| conserved hypothetical protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 3826

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 79/287 (27%), Gaps = 55/287 (19%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPAT 152
             +   A    +    +      +L        +E   A    Q + A      ++  P  
Sbjct: 2245 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRHAAE--YADLVCDPKK 2302

Query: 153  REFAVYSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+  +       GD  +A  R A    +++   P      ++       W  A+   
Sbjct: 2303 NAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYP-----FLRLQEEEG-WVEALAAD 2356

Query: 212  NQKKKNAKEW----------------------NRNRAILLI---ARSLENADKGDMIASY 246
               +++A E+                       R  A+      A +++           
Sbjct: 2357 EAFQRHAAEYADLVCDPKKNAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYPFLRL 2416

Query: 247  HD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            H+    +E+L   +     +   A  +    K   A   +E                +  
Sbjct: 2417 HEEEGWVEALAADEAFQRHAAEYADLVCDPKKNAAALRGVEDA-------------MNER 2463

Query: 304  SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
             +     L+RA  ++E+        +   +  +E  + D+A  +   
Sbjct: 2464 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRLAA 2510



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 93/325 (28%), Gaps = 57/325 (17%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPAT 152
             +   A    +    +      +L        +E   A    Q + A      ++  P  
Sbjct: 1953 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRHAAE--YADLVCDPKK 2010

Query: 153  REFAVYSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+  +       GD  +A  R A    +++   P      ++ +     W  A+   
Sbjct: 2011 NAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYP-----FLRLHEEEG-WVEALAAD 2064

Query: 212  NQKKKNAKEW----------------------NRNRAILLI---ARSLENADKGDMIASY 246
               +++A E+                       R  A+      A +++           
Sbjct: 2065 EAFQRHAAEYADLVCDPKKNAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYPFLRL 2124

Query: 247  HD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            H+    +E+L   +     +   A  +    K   A   +E                +  
Sbjct: 2125 HEEEGWVEALAADEAFQGLAAEYADLVCDPKKNAAALRRVEDA-------------MNER 2171

Query: 304  SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA--HAKAMLAMKIAPRKEIF 361
             +     L+RA  ++E+        +   +  +E  + D+A     A  A  +   K+  
Sbjct: 2172 GDAVAATLRRAAAMDELASRYPFLRLQEEEGWVEALAADEAFQRHAAEYADLVCDPKKNA 2231

Query: 362  LLLAQIEQANSHNTDKILYWTQSAL 386
              L  +E A +   D +    + A 
Sbjct: 2232 AALRGVEDAMNERGDAVAATLRRAA 2256



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 93/325 (28%), Gaps = 57/325 (17%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPAT 152
             +   A    +    +      +L        +E   A    Q + A      ++  P  
Sbjct: 2391 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRHAAE--YADLVCDPKK 2448

Query: 153  REFAVYSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A+  +       GD  +A  R A    +++   P      ++ +     W  A+   
Sbjct: 2449 NAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYP-----FLRLHEEEG-WVEALAAD 2502

Query: 212  NQKKKNAKEW----------------------NRNRAILLI---ARSLENADKGDMIASY 246
               ++ A E+                       R  A+      A +++           
Sbjct: 2503 EAFQRLAAEYAELVCDPKKNAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYPFLRL 2562

Query: 247  HD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            H+    +E+L   +     +   A+ +    K   A   +E                +  
Sbjct: 2563 HEEEGWVEALAADEAFQGLAAEYAELVCDPKKNAAALRGVEDA-------------MNER 2609

Query: 304  SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA--HAKAMLAMKIAPRKEIF 361
             +     L+RA  ++E+        +   +  +E  + D+A     A  A  +   K+  
Sbjct: 2610 GDAVAATLRRAAAMDELASRYPFLRLQEEEGWVEALAADEAFQRHAAEYADLVCDPKKNA 2669

Query: 362  LLLAQIEQANSHNTDKILYWTQSAL 386
              L  +E A +   D +    + A 
Sbjct: 2670 AALRGVEDAMNERGDAVAATLRRAA 2694


>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 476

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 15/175 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD----ISPDA 187
               + A + L+ M+++    E   Y L  E  C+ G  + A +   K ++    + P +
Sbjct: 296 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQS 355

Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                P     +++      + S+A T + Q  K            L      ++ +G  
Sbjct: 356 TLHLEPSAHNPMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 411

Query: 243 IASYHDAIESLKLCDNSIMASICAA-KSLISQNKKRKAEVILEKIWKVNPHPEIA 296
            +++      L+   +S  ++  +  +S + +N+   A+  L+ + + +  P+ A
Sbjct: 412 DSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 466


>gi|302878313|ref|YP_003846877.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302581102|gb|ADL55113.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
          Length = 750

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 75/238 (31%), Gaps = 20/238 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           YL +        +++ A      +L++      A +++       G  + A  Y   AL+
Sbjct: 10  YLNQAVAQQLAGEFDAAERSYLEILRLDPQHSEAQHNMGVLLLNRGASDDALLYLLAALE 69

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN---ADK 239
           I P       + +     A +   A   L    +   +     A+   A+ +        
Sbjct: 70  IEPSRGQYWISYIDALFKAGQREAAQQVLELAVQQGLQGEEVDALCFQAQEIAPYSPVSA 129

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G   +     + +L        A++ A +  +       A       WKV          
Sbjct: 130 GVPSSQEQQTLLALFNAGQQSEAAVLARRMTL-------AYPSFGVGWKV---------- 172

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              ++ +    L    +   +  +  E+   +  I   +G +D+A A    A+++ P 
Sbjct: 173 LGAVTVSDKEALIPMQQAALLCPDDFEAHYNLGLILQALGQLDEAAASYRRALQLNPD 230


>gi|257061342|ref|YP_003139230.1| hypothetical protein Cyan8802_3576 [Cyanothece sp. PCC 8802]
 gi|256591508|gb|ACV02395.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 261

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 22/205 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+  I A N   A  +  +         +   Y           + + A     + +Q+
Sbjct: 41  QGVDKIGAGNYQGA--IADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQL 98

Query: 150 PATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPW-------VTEAVVQQYVLA 201
              +    Y     +  ++ D   A    ++A+ ++P+            + +       
Sbjct: 99  NP-QFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAI 157

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +++ AI             N N A     R+L       +  +  D  +S++L  N   
Sbjct: 158 ADYTEAIRL-----------NSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFAD 206

Query: 262 ASICAAKSLISQNKKRKAEVILEKI 286
           A      +      + +A   L+K 
Sbjct: 207 AYYNRGITQFKLGNESEAIADLQKA 231


>gi|218247323|ref|YP_002372694.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218167801|gb|ACK66538.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 260

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 22/205 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+  I A N   A  +  +         +   Y           + + A     + +Q+
Sbjct: 40  QGVDKIGAGNYQGA--IADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQL 97

Query: 150 PATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPW-------VTEAVVQQYVLA 201
              +    Y     +  ++ D   A    ++A+ ++P+            + +       
Sbjct: 98  NP-QFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAI 156

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +++ AI             N N A     R+L       +  +  D  +S++L  N   
Sbjct: 157 ADYTEAIRL-----------NSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFAD 205

Query: 262 ASICAAKSLISQNKKRKAEVILEKI 286
           A      +      + +A   L+K 
Sbjct: 206 AYYNRGITQFKLGNESEAIADLQKA 230


>gi|197123792|ref|YP_002135743.1| hypothetical protein AnaeK_3401 [Anaeromyxobacter sp. K]
 gi|196173641|gb|ACG74614.1| Tetratricopeptide TPR_4 [Anaeromyxobacter sp. K]
          Length = 453

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 86/286 (30%), Gaps = 24/286 (8%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREF---------------AVYSLYFESCRIGD 169
           L  +      +   A E    +                        A ++L       G 
Sbjct: 45  LSARAQRLYAEAVQAQEDQRRLKVPTDWAVLERKWRAVLDAGEVAEARHNLGVALEAQGR 104

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           ++ A+    KAL   P        +        + + A +      ++  E  R R  L 
Sbjct: 105 VDEARAEYQKALAAKPGLRQSAVNLGVLLEKQGDLAGAQSIYAAVVRDFPEDARARERL- 163

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +    D G +  ++  A E+L     S+ A +  A+  + +     A++IL +  K+
Sbjct: 164 ---AAMYRDAGQLDEAWRLAREALLRDSRSVGAYVVMARVSLQRGNLDVAQLILLRAQKL 220

Query: 290 NPH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            P     P +A        +     ++    L  ++   + +   +   A++        
Sbjct: 221 APSEPELPFLAGEVLAKQGDVEAAAVQWRKALA-LDDGYLPARRALLDAAVKGRRWPVVA 279

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A   +   P+     L   + + +    D+ L     A  A  D
Sbjct: 280 EHAQAMVHADPKNAAAWLALGVAKRHQDKPDEALAAYAKAQEASGD 325


>gi|118094699|ref|XP_426665.2| PREDICTED: similar to tetratricopeptide repeat domain 4 [Gallus
           gallus]
          Length = 313

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 40/91 (43%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            K++ RA+   ++  +        RA+LL  R+      G+  ++  DA ++ KL  + +
Sbjct: 80  EKDYGRAVRAYSEGLRQRFGDAELRAVLLSNRAAAQCRLGNYRSALADATQARKLKPDHL 139

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            A +  A   +      +A    E+  +++P
Sbjct: 140 KAVVRGALCHMELKNYSEAIAWCEEGLRIDP 170


>gi|32476215|ref|NP_869209.1| hypothetical protein RB10039 [Rhodopirellula baltica SH 1]
 gi|32446759|emb|CAD76595.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 465

 Score = 40.3 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 3/128 (2%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  ++   G +++A  +A  A    PD P V   + +       +  AI  L+     
Sbjct: 83  RELAEQALADGRIDAAYDHARVAFRYGPDDPLVIFVMARVLGERHRFEEAIAMLDSVAMR 142

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +    R   L   +     KGD   + +     L    +  M     AK  + Q ++ 
Sbjct: 143 DPQA---RLPTLGQTAQWMVLKGDWEQAENRYKAILDEVPDIAMVHEEIAKLYLRQGRRH 199

Query: 278 KAEVILEK 285
            A   + +
Sbjct: 200 DASSHIRQ 207


>gi|327194865|gb|EGE61697.1| putative O-linked GlcNAc transferase protein [Rhizobium etli
           CNPAF512]
          Length = 288

 Score = 40.3 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q   A   ++ A +     L     R +    L ++     D   A    +KA+ ++P
Sbjct: 151 AGQDDQAFNDFDRAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++P         Y+   +   A    N    +A E N N A     ++L    +GD   +
Sbjct: 204 NSPEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQN 274
                 ++ L      A    A+   S  
Sbjct: 260 ARSYRHAVGLDPKYQPARDGLARVGASAG 288


>gi|323177323|gb|EFZ62911.1| tetratricopeptide repeat family protein [Escherichia coli 1180]
          Length = 745

 Score = 40.3 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 170 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 229

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 230 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 284


>gi|294638216|ref|ZP_06716470.1| cellulose synthase operon protein [Edwardsiella tarda ATCC 23685]
 gi|291088652|gb|EFE21213.1| cellulose synthase operon protein [Edwardsiella tarda ATCC 23685]
          Length = 1173

 Score = 40.3 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 87/311 (27%), Gaps = 57/311 (18%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G  ++AA     AR+ +             L+ L +V  A        A    +  LQ 
Sbjct: 379 QGDEALAARRYDEARQKYRQAQALDGQEAYALIGLGDVAAAQ--GDLASAERTYQRALQF 436

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRY-------ATKALDISPD--APWVTEAVVQQYVL 200
            +    A+  L     +    + A  Y         +AL  +         +        
Sbjct: 437 DSNNGSALRKLVGVYQQQS-PDKALMYLQQLPSAQRRALKANYQSLQSDALQQQAAVLAG 495

Query: 201 AKEWSRAITFLNQKKKNAKE-----------------------------------WNRNR 225
            + W  A+  L   ++   +                                    ++  
Sbjct: 496 RQAWGPALERLTAAQQLTPDDVWLNYRLAGTLVSAGQPLRGDALMQRMAQRFPHDRDQIY 555

Query: 226 AILLIARSLENADKGD------MIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRK 278
           A  L   S +   + +          + D +++  L        I A A  L     + +
Sbjct: 556 AHALYLSSRDQTQQAEAVLRQLPRDQWSDGMQA--LALRLQANRILAHANQLRDAGDETQ 613

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           A   L++    +P  ++      L  ++    L+   ++   + ++ ++ + + +  +  
Sbjct: 614 AIAYLQRQ-PSSPAIDLTLADWALARDDYHTALQGYQQVLARDPQNADARLGMIETRVAQ 672

Query: 339 GSIDQAHAKAM 349
           G    A A   
Sbjct: 673 GDYPAARAALQ 683


>gi|291222353|ref|XP_002731180.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 1253

 Score = 40.3 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 107/316 (33%), Gaps = 61/316 (19%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEM-MLQIPAT 152
           + +I  A+      + QH           +LL  QI   +  +  A + LE  +      
Sbjct: 471 SGDIDAAQ-----STLQHCLDINPTFSDAHLLMAQIYAHQGSFKQASQSLEQGLSYNFEV 525

Query: 153 REFAVYSLYFES--CRIGDLNSAQRYATKALDI----SPDAPWVTEAVVQQYVLAKEWSR 206
           RE  +Y L       R GD+  A R    A+ +     P A                   
Sbjct: 526 RESPLYHLIKARIQKRQGDIEDAARTLQTAMTLPGIKKPGAGSA---------------- 569

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS---LENADKGDMIASYHDAIESLKLCDNSIMAS 263
                 +K K  +    +R  + +  +    +   + +      DAI         +  +
Sbjct: 570 ------KKTKAGQVSTNDRVSVFLELADAYRQLDRQPEAAKVMQDAINEFTDTPEEVRIT 623

Query: 264 ICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRA---- 314
           I  +   + +     A  +L      + + V    ++A+IY +   +      KR     
Sbjct: 624 IANSDLALQRGDVELALGMLRNITPGQSYYVEAKEKMADIYLNYRKD------KRLYASC 677

Query: 315 -LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--N 371
              L + + +S  + +++    + +   ++A      A+K  P    F L ++I +A   
Sbjct: 678 YRELVDKH-QSAHTSLLLGDAYMSIQEPEKAIEVYEAALKKNP--RDFTLASKIGRALVK 734

Query: 372 SHNTDKILYWTQSALH 387
           +HN  K + +  +AL 
Sbjct: 735 THNYGKAINYYDAALK 750



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 33/234 (14%)

Query: 149 IPATREF--AVYSLY---FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            P T+     +  L+         GD+++AQ      LDI+P        + Q Y     
Sbjct: 448 DPLTKAVPGLMEGLFLMGKVKFLSGDIDAAQSTLQHCLDINPTFSDAHLLMAQIYAHQGS 507

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           + +A   L Q      E  R   +  + ++     +GD+  +      ++ L       +
Sbjct: 508 FKQASQSLEQGLSYNFEV-RESPLYHLIKARIQKRQGDIEDAARTLQTAMTLPGIKKPGA 566

Query: 264 ICAAKSLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
             A K      +    + +   LE          +A+ Y  L  +      K        
Sbjct: 567 GSAKK--TKAGQVSTNDRVSVFLE----------LADAYRQL--DRQPEAAKVMQDAINE 612

Query: 321 NKESVES-LVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEIFL----LLAQI 367
             ++ E   + ++   +AL+ G ++ A     +   I P +  ++     +A I
Sbjct: 613 FTDTPEEVRITIANSDLALQRGDVELA---LGMLRNITPGQSYYVEAKEKMADI 663


>gi|189500702|ref|YP_001960172.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496143|gb|ACE04691.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
          Length = 466

 Score = 40.3 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 67/236 (28%), Gaps = 41/236 (17%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
              +     +   A E     ++       A+Y+L      + D + A  + T+ +++ P
Sbjct: 245 RANVLAITGKIEEAAESYLKTIEFEPDDINALYNLGIAFEELEDYDKAITHYTRCIELKP 304

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D                 W                          A +  +        +
Sbjct: 305 DFADA-------------W-------------------------FALACCHEADNAYEEA 326

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304
                ++L     S+      A+   +     ++    +KI  +    P++   Y  +L 
Sbjct: 327 LKSVNQALNYLPGSVDFLQLKAEIYYNMESLERSISTYKKILTIEADSPQLWVDYAVVLR 386

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           E ++    L+      E+  +S E+   ++     +G           A  I P K
Sbjct: 387 EASLYTESLEAFEHSLELQPQSAETHFEIAATYFALGDKKSTIKSLTKAFSIDPDK 442


>gi|117925099|ref|YP_865716.1| hypothetical protein Mmc1_1802 [Magnetococcus sp. MC-1]
 gi|117608855|gb|ABK44310.1| TPR repeat-containing protein [Magnetococcus sp. MC-1]
          Length = 822

 Score = 40.3 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 22/160 (13%)

Query: 141 EKLEMMLQIPATREFAVYS-----LYFESCR-IGDLNSAQRY---ATKALDISPDAPWVT 191
           +  E M+Q P              +Y  + +  G   +A      A +A  ISP      
Sbjct: 230 QLFEWMVQHPP------RGQDPWLVYVNALQLDGAYQAALDLCVQAEQAQQISPQLWDAR 283

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
               Q       W  A+           E + +RA +     +     G  + +      
Sbjct: 284 GVAWQ---AVGAWQEAMRAFEISL----EQDASRAAVHSNFGMLCHILGKDVEAEQAFRH 336

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ L  +  MA      +L  Q +  +A V   +  ++NP
Sbjct: 337 AIGLQPDLAMAYANLGLALTRQYRLAEAAVACRQALQLNP 376


>gi|326385959|ref|ZP_08207583.1| cellulose synthase protein C precursor [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209184|gb|EGD59977.1| cellulose synthase protein C precursor [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 1150

 Score = 40.3 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 85/269 (31%), Gaps = 49/269 (18%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL       A+ + E           A+  L   + + G+   A+ Y  ++  +   A 
Sbjct: 133 AALQANDLATANRQFESAFARNHRDADALGGLGLVALKQGNFAKAREYLEQSSRLGDAAK 192

Query: 189 WV-----------------------------------------TEAVVQQYV----LAKE 203
           W                                           E  ++           
Sbjct: 193 WAEALASAKYYAGLGDAQNLAARGQLADAQKMAEDLVRTGGARNETALELLADIYDRQGR 252

Query: 204 WSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           ++ A     Q   + KE ++   +     R+L  A +GD IA+  +  + L L       
Sbjct: 253 YADAADLYRQASTHGKEGDKRLASRAARGRALAAAGRGDDIAAEQEFQQGLMLDTEDPWI 312

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
               A+ +I + +  +AE ++ +    +  P+   +Y   + ++ +G++  A  L +   
Sbjct: 313 RYEFARFMIKRGRVAEAESLI-QALSSSTDPD--ALYAAAMVDSDLGRIAAAEALIQRIP 369

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           E  ++  + +           A AK + A
Sbjct: 370 EIYQTQPMRAFAVGLKTDTAIARAKTLAA 398


>gi|254442097|ref|ZP_05055573.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256405|gb|EDY80713.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 506

 Score = 40.3 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 8/139 (5%)

Query: 126 EVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           E   AL       A + L   + + P + E  V +L       G+L  A     +A++  
Sbjct: 42  EANAALFVNDTATAIDALREGLAKYPDSNELRV-ALSRAVQNTGELEEAASLLEQAIEQD 100

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMI 243
           PDA  +   V +      +   AI       K +  ++   +A+     + EN   G + 
Sbjct: 101 PDADQLWVKVGELRASLGQSEAAIRAFESFLKNHGGDFLAWKAV-----AQENEKLGKLT 155

Query: 244 ASYHDAIESLKLCDNSIMA 262
            +   A +  ++  +S  A
Sbjct: 156 DAIKAASKWNEITPSSQPA 174


>gi|167585426|ref|ZP_02377814.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ubonensis Bu]
          Length = 608

 Score = 40.3 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 89/276 (32%), Gaps = 26/276 (9%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++AA     A  + +    +    +      ++  + +   +   A      ML     
Sbjct: 121 IALAAQ--SPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQP----MLARELA 174

Query: 153 REFA-VYS-----LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           R            L     R  D           L    + P    A+ +Q +   +   
Sbjct: 175 RANGDTRGPAILALQALLARGADRVGGLAVLRDMLKNDMNRPEAQLAIARQQLAVDDKDG 234

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L Q  +   ++       L+   +  A++   I S+   ++      +   A +  
Sbjct: 235 AAQSLKQALQIRPDY---LPAALMLSQMGPAERAAGITSFEKYVQQNPKSRD---ARLAL 288

Query: 267 AKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEI 320
           ++  ++  +   A+   E + K    +P P +A     +     ++    LK+ ++L   
Sbjct: 289 SQLYLADERLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDATAYLKQYVQLGAK 348

Query: 321 NKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              +   +  + +++IA++ G+   A        + 
Sbjct: 349 QPNADVGQGYIYLAQIAIDQGNDANASQWLDKVDQT 384



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 62/166 (37%), Gaps = 16/166 (9%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A + +     D   +     ++L++  + + A++     L       +A  I      V
Sbjct: 220 LAIARQQLAVDDKDGAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGITSFEKYV 275

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             +P+     +A    +L  E      K+   + +++ +    L+ ++ I ++   +D A
Sbjct: 276 QQNPKSRDARLALSQLYLADERLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDA 335

Query: 345 HAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
            A     +++  ++      + ++ LAQI   +  N      W   
Sbjct: 336 TAYLKQYVQLGAKQPNADVGQGYIYLAQI-AIDQGNDANASQWLDK 380


>gi|86157635|ref|YP_464420.1| hypothetical protein Adeh_1209 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774146|gb|ABC80983.1| conserved hypothetical membrane protein [Anaeromyxobacter
            dehalogenans 2CP-C]
          Length = 1079

 Score = 40.3 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 64/206 (31%), Gaps = 16/206 (7%)

Query: 201  AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--DMIASYHDAIESLKLCDN 258
              + +         +   ++    +A+      L     G  D++ +      ++     
Sbjct: 814  RGDAAGVADLEEAARAAPEDGVIRQAVAEALVQLGVDADGARDVLRAEGLYRAAIAAWPR 873

Query: 259  SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313
              +A +   ++L  + +  +A     +  ++NP     H   A++   L        +  
Sbjct: 874  FEIAWVNLGRALALEGRVPEALAAERRALELNPESGGAHRWAADLLLAL--GRPGEAIAH 931

Query: 314  ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----EIFLLLAQIE 368
            A     +   +      +       G  D+   +   A+++ PR         LLLA   
Sbjct: 932  AREAVRLAPGAARLRAGLGTSLAMAGRFDEGLRELREAVRLDPRAPEPLGRAALLLATRP 991

Query: 369  QANSHNTDKILYWTQSA--LHAMPDP 392
             A   + ++ +     A  L    DP
Sbjct: 992  GATGADAEEAVRLASRARSLTDGRDP 1017


>gi|319788000|ref|YP_004147475.1| cellulose synthase operon C domain protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317466512|gb|ADV28244.1| cellulose synthase operon C domain protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 1499

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 77/247 (31%), Gaps = 26/247 (10%)

Query: 148 QIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           Q P  R            +   GD   A+    + L   P  P     +    +  + ++
Sbjct: 272 QDPNQRLLAEGFR-----ALEGGDDAVAEARFAQVLRARPRDPEAMGGLGSVRLRQQRFA 326

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A   L       ++W +         +L+ A  G   A       +++L      A   
Sbjct: 327 EASELLRPAAAANRKWKQAADTAQYWVTLQGARNGGPDAVRK-VSAAVQLVPR-EPAGHV 384

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLE-EINKE 323
               L   +    AE    K  +++  P  A     L+      G+   A  L   +  E
Sbjct: 385 LLAQLQEGSDPAAAEAGYRKALELD--PANAGALQGLVGLLGRQGRAAEAASLYERLTPE 442

Query: 324 SVE---------SLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI-EQA 370
             E         + +  ++   AL  G +D A  +   A+    R     L LA++ ++A
Sbjct: 443 QRERAGGAGALRASLARARAQEALAAGDLDTARIELEDALLEDGRDPWLRLELARLYQRA 502

Query: 371 NSHNTDK 377
              +  +
Sbjct: 503 GRPDQAR 509



 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 10/132 (7%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--------YSLYFESCRIGDLNSAQRYATKALDIS 184
           + +   A    E +      R             +   E+   GDL++A+     AL   
Sbjct: 426 QGRAAEAASLYERLTPEQRERAGGAGALRASLARARAQEALAAGDLDTARIELEDALLED 485

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
              PW+   + + Y  A    +A   ++      +      A      + E  D G + A
Sbjct: 486 GRDPWLRLELARLYQRAGRPDQARGIMDGLLAIDESPQTLHA--AAVYAQEQGDWGSVYA 543

Query: 245 SYHDAIESLKLC 256
           +      + +  
Sbjct: 544 NLERIPPASRDS 555


>gi|168700576|ref|ZP_02732853.1| possible protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 1093

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 51/179 (28%), Gaps = 22/179 (12%)

Query: 113  QHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
            +    +  L   Y+   Q+  A      A       L+       A +       R GD 
Sbjct: 841  RALKLDPKLTEAYIQRGQLREAVGDSAGAIGDYTQALETGTAPARAYFKRATAKFRAGDR 900

Query: 171  NSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNRN 224
            + A+        ++P     WV  A          W+     A+   ++  K        
Sbjct: 901  DGAKADREAGFQVTPTDELSWVARA-------ENRWTEDPTGALADADEALKENG----- 948

Query: 225  RAILLIARSLENADKG--DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R++  +        +G      +      +++L  + + A       L    K+ +A  
Sbjct: 949  RSVFALQMKAAILSEGLKRPEDALKVLDRAVELHPDYVPARAGRGVLLARAGKREEALR 1007


>gi|163738051|ref|ZP_02145467.1| hypothetical protein RGBS107_06554 [Phaeobacter gallaeciensis
           BS107]
 gi|161388667|gb|EDQ13020.1| hypothetical protein RGBS107_06554 [Phaeobacter gallaeciensis
           BS107]
          Length = 818

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 79/285 (27%), Gaps = 38/285 (13%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATREF 155
           A +  LA      V +    H    + L E +IA  +     +A E  + + +       
Sbjct: 474 AGDPHLAGAALRSVDRTGVEHVPE-INLAEAEIARLKGDVETVAQELTDEVAERSENAPR 532

Query: 156 AVYSLY------FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           A+  L         +      + A  Y       SP    +  AVV    L  E+  +  
Sbjct: 533 ALIELIDLSFAERSALSPDVPDLAASY-EVENRDSPLGADLRRAVVAALALTGEFHDSFN 591

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L    +      R  A+  +   L           Y   I +          +   A+ 
Sbjct: 592 ELEVLSRRDGPAARTAALEPLLTLLTERADDVTFLQYALVIAANGTTAEVAPVADIVAER 651

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           L+     ++A+ IL+K                +   NT  +L  A     +  +   S +
Sbjct: 652 LLDLGFAQQAQSILKK--------------LAMEPGNTKRRLILAK--AALAMDKPHSAL 695

Query: 330 -------------IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                        + ++     G   +A    +   +       F
Sbjct: 696 VELMGLSGSAANKLRAEALWRNGEYARAGEYLLEEQEKDAAARGF 740


>gi|160900159|ref|YP_001565741.1| tetratricopeptide repeat-containing protein [Delftia acidovorans
           SPH-1]
 gi|160365743|gb|ABX37356.1| Tetratricopeptide domain protein [Delftia acidovorans SPH-1]
          Length = 391

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 65/174 (37%), Gaps = 9/174 (5%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAI 227
             ++ +R    A +          A++  Y  +++W++A     + ++ N  +++   A 
Sbjct: 128 AEDALRRLEGTAFE-----AEARLALLAIYERSRDWTQAAAIARRMQEANQGDFSGRLAH 182

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L   +     +G    +     +++     +    +  A+      +  +A   LE + 
Sbjct: 183 YLCEDAQALLTQGQQAEALQRLQQAITTAPQAARPRLEHAQLQHRMGQSAQALHTLESLA 242

Query: 288 KVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           + +P   P  A +   + +  T  +      L +  +++    ++ + +AL+  
Sbjct: 243 EQSPASLPLAAQLLVDIAA-ATGQRQHIHQLLSQQYEQAPSLDLLQALVALDAQ 295


>gi|56420359|ref|YP_147677.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426]
 gi|47076784|dbj|BAD18326.1| hypothetical protein [Geobacillus kaustophilus]
 gi|56380201|dbj|BAD76109.1| hypothetical protein [Geobacillus kaustophilus HTA426]
          Length = 1358

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 11/189 (5%)

Query: 178  TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             +A+ ++         + + YV  +    A+    +    A+ W+ + A   +   L+  
Sbjct: 1154 EEAIRLNRSHAEAYGQLARLYVAIELEDDAVKTWRKAL--ARVWDPSLAREFVEHLLKAD 1211

Query: 238  DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
            ++     +       +    + +   +  A   + + +  KAE  LE I    P   +A 
Sbjct: 1212 EEKKRQEAKRWLERLVADDPDDVELRVLQAVVWLQEGQHEKAERQLEAIVAEEP---LAR 1268

Query: 298  IYTHLLSEN--TVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                LL E     G+ + A  L     +   E  E  + ++      G I++A A     
Sbjct: 1269 EALMLLGEQYMETGRYQEAAALWERYADWYPEDEELNMQLAAAYEAAGHIERALAAIERC 1328

Query: 352  MKIAPRKEI 360
              +A    +
Sbjct: 1329 AHMAKDARL 1337



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 84/255 (32%), Gaps = 44/255 (17%)

Query: 134  RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE- 192
             +Y  A +  E  L+   +     + L       G+      +  +A+ ++P      + 
Sbjct: 920  GRYQEAKQHYEACLKADPSFVLCHFRLAALYEAEGNEERQHAHLLQAVRLAPLRVDSEQL 979

Query: 193  -AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             A+++   L       +  L   +    +     ++  +  +L   D+           +
Sbjct: 980  AAIIEPPAL-------LEALADARPRGGDAWYYDSLGYVYGALGRNDQEKA-----AVEK 1027

Query: 252  SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV 308
            +L L  +        A  L  + + ++A  +LE++     HP+   + + Y  L  +   
Sbjct: 1028 ALALDLDHSEVLRHYANVLSREGRTKEAIKLLERLMVR--HPDDESLYSAYVALFPKTMR 1085

Query: 309  GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
            G  K   RLE +     E+  +V + A                           LL  + 
Sbjct: 1086 GLGKLRHRLERLKIG-REAKSVVYRNAAAA------------------------LLPYLG 1120

Query: 369  QANSHNTDKILYWTQ 383
            +  + N   + +WT+
Sbjct: 1121 EKQNENDGPVRWWTK 1135


>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 863

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 88/281 (31%), Gaps = 57/281 (20%)

Query: 129 IALAERQYNIAHEKLEMML---------QIPATR--EFAVYSLYFESCRIGDLNSAQRYA 177
              ++  ++ A    +  L         + P+T      +  + +E    G+L+ A  + 
Sbjct: 364 AYYSKGDFDKAIHYYKKALAITVETLGEKHPSTADSCVGL-GIAYEKK--GELDRAIAFY 420

Query: 178 TKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNR 225
            +AL I         P+       +   Y    ++ RAI   ++          E + + 
Sbjct: 421 EQALAIMVEALGEKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPST 480

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSI----MASICA----AKSLISQNKKR 277
           A           DKGD   +     ++L +   ++     ++  +      +   + +  
Sbjct: 481 AQTYNNLGGAYHDKGDYDKAIALYEKALAITVEALGEKHPSTATSYNNLGGAYARKGEYD 540

Query: 278 KAEVILEKIWKV------NPHPEIANIYTHLLS---------------ENTVGKLKRALR 316
           KA    EK   +        HP  A+ Y +L +               E  +    +   
Sbjct: 541 KAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQYGKAIHHYEQALAI--KVET 598

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           L E +  +  +   +  +    G  +QA A    A+ +   
Sbjct: 599 LGEKHPSTAMTYFNIGLLHDTRGDKEQACAYVQQALDVFAT 639


>gi|311266503|ref|XP_003131118.1| PREDICTED: transmembrane and TPR repeat-containing protein 4-like
           [Sus scrofa]
          Length = 946

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 7/133 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            ++  V + EW                     A +        ADKG+  A+     E++
Sbjct: 659 TLRCMVRSGEWRSEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 714

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L + +N++ + +
Sbjct: 715 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNLGIVQNSLKRFQ 772

Query: 313 RALRLEEINKESV 325
            A +      +  
Sbjct: 773 AAEQSYRTAIKHR 785


>gi|291406105|ref|XP_002719435.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, member 7 [Oryctolagus
           cuniculus]
          Length = 494

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L+I +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRIDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+      +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYTDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|303280738|ref|XP_003059661.1| mRNA splicing protein [Micromonas pusilla CCMP1545]
 gi|226458316|gb|EEH55613.1| mRNA splicing protein [Micromonas pusilla CCMP1545]
          Length = 939

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 85/291 (29%), Gaps = 52/291 (17%)

Query: 160 LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           L     R   GD+  A+    +A   + ++  +  A  +     +E  RA   L + ++ 
Sbjct: 599 LMAAKERWLAGDVAGARDILEEAFVANSESEDIWLAAFKLEFENREPERARALLAKAREK 658

Query: 218 AKEWNR---NRAIL------------LIARSLEN---------------ADKGDMIASYH 247
                R     A++            L++  LE                  +GD+ A+ +
Sbjct: 659 GGASERVWMKSAVVEREVGDVAAERRLLSEGLEKFPQFWKMWIMLGQLEEKEGDVDAARN 718

Query: 248 DAIESLKLCDNSIMASICAAKSLIS---QNKKRKAEVILEKIWKVNPHPE-IANIYTHLL 303
              +  + C ++I     AA    S    N   KA  +LE+    NP  E +        
Sbjct: 719 AYAKGTRRCPDAIPLWCAAAALEASPDGGNAPAKARAVLEQARLRNPANETLWLTAARQE 778

Query: 304 SEN-----TVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                        + A  L     +E   S ++ ++         +         +    
Sbjct: 779 RGGKPVGVDPESDRAADALMAKALQECPASGMLWAEAVRMAPRPQRKSKSVDALKRCDND 838

Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408
             +   +A +   +    DK   W   A+   PD         +   W   
Sbjct: 839 PAVIASIANLFWLDRK-MDKARGWFNRAVTLNPD---------VGDHWAAY 879


>gi|170682243|ref|YP_001744738.1| TPR repeat-containing protein [Escherichia coli SMS-3-5]
 gi|170519961|gb|ACB18139.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5]
          Length = 1093

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G  ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|117621224|ref|YP_856347.1| tetratricopeptide repeat protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562631|gb|ABK39579.1| tetratricopeptide repeat family protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 388

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 15/200 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             + + A     + L++  +      ++   +    E  RAI   +Q     +     R 
Sbjct: 48  SDESDKAVDLFIQLLEVDSETIETHLSLGNLFRQRGEVDRAIKI-HQNLVTRQLTREQRQ 106

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L   + +    G +  +     E   LCD+S       A+ LI   + R  +  ++  
Sbjct: 107 LALQELARDFLAAGLLDRAEALWNE---LCDDSDYEETALAQLLIIHQQLRDWDKAIDVA 163

Query: 287 WK---------VNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            +           P  H       + L   +    L +  R   +N     + + ++++A
Sbjct: 164 VRLQKFQGKKLAEPISHFYCEQAESALREGDKPAGLAKLKRALSVNPACARASLRLAELA 223

Query: 336 LEMGSIDQAHAKAMLAMKIA 355
           +  G  +QA    +   +  
Sbjct: 224 MAAGEYEQASKDLLRVFEQD 243



 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 77/225 (34%), Gaps = 13/225 (5%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           +   L +       + L    ++  A  +  A  + + +     +    L  LL   I  
Sbjct: 96  VTRQLTREQRQLALQELARDFLA--AGLLDRAEALWNELCDDSDYEETALAQLLI--IHQ 151

Query: 132 AERQYNIAHEKLEMMLQIPATREFA-VYSLYFE----SCRIGDLNSAQRYATKALDISPD 186
             R ++ A +    + +    +    +   Y E    + R GD  +      +AL ++P 
Sbjct: 152 QLRDWDKAIDVAVRLQKFQGKKLAEPISHFYCEQAESALREGDKPAGLAKLKRALSVNPA 211

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  + +  + A E+ +A   L +  +   ++       L           D+I   
Sbjct: 212 CARASLRLAELAMAAGEYEQASKDLLRVFEQDIDFASEAIPFLNECYQRLGRAHDLIPLL 271

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             A+E        +  ++  AK +  ++   +A  ++ +  + +P
Sbjct: 272 EQAVEDHAG----VSVTLALAKLVEERDGLSQARALVLRQLRRHP 312


>gi|158421607|ref|YP_001527834.1| LuxR family transcriptional regulator [Deinococcus geothermalis DSM
           11300]
 gi|158342850|gb|ABW35136.1| predicted transcriptional regulator, LuxR family [Deinococcus
           geothermalis DSM 11300]
          Length = 955

 Score = 40.3 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 19/184 (10%)

Query: 90  TGLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHE 141
             L +    +I LA+        H+   +        L  +L  Q  I+ A R    A  
Sbjct: 390 RALRAFREGDIGLAQATCEEGLDHARTFRDRIQLQRVLATVLVQQGRISEAGRIIRSALA 449

Query: 142 KLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEA 193
             E +  +P       ++    E+   GD   A     +   +             V + 
Sbjct: 450 LAEALGDVPMLLNVLGLHGFQLEAQ--GDYLGALAVHERTFSLIERHRHDNNRLLLVAQR 507

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIES 252
           +      A   S A+  L    +     +     +LL +RS  +   G   A+  DA  +
Sbjct: 508 LASLRREAGNLSGALDILEVALQRLHRTHPEAVPVLLSSRSAVHLMAGHPGAALADAERA 567

Query: 253 LKLC 256
           + L 
Sbjct: 568 VSLA 571


>gi|257092427|ref|YP_003166068.1| HemY domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044951|gb|ACV34139.1| HemY domain protein [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
          Length = 327

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 27/112 (24%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M +L     + +L +   +        +           S  + + ++         L  
Sbjct: 1   MTKLSWLLALFALAVGIALAARFNEGYLLRVLLPYRAEVSLNLAIFLVVSIFVVVYGLLR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112
                L+ P  +     +R   K   A    +  +       A K       
Sbjct: 61  AIGLALALPNRVQAFRERRRRVKAAIAFDDAVRLLFEGRFGRALKKAGEAHA 112


>gi|4063356|gb|AAC98286.1| unknown [Myxococcus xanthus]
          Length = 222

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%)

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           +  +L++  ++     +S  S   + K+ LE     +A      A+++ P     ++   
Sbjct: 120 SDARLEQFKKMVVDFPDSPMSHFSLGKLYLERRQYPEAAQALESAVRLDPTYAAAMVALG 179

Query: 367 IEQANSHNTDKILYWTQSALH 387
              A +  +DK       A  
Sbjct: 180 DAWAGAGESDKAREVLGRARE 200


>gi|322780747|gb|EFZ10004.1| hypothetical protein SINV_16602 [Solenopsis invicta]
          Length = 202

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 43/138 (31%), Gaps = 4/138 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A       L++      A  +L     + G LN A  +  +A+ I P       
Sbjct: 7   QGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYS 66

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +       ++   A+    +  +    +    A      +  + D G++  +      +
Sbjct: 67  NMGNTLKEMQDIQGALQCYTRAIQINPAF----ADAHSNLASIHKDSGNIPEAIQSYRTA 122

Query: 253 LKLCDNSIMASICAAKSL 270
           LKL  +   A    A  L
Sbjct: 123 LKLKPDFPDAYCNLAHCL 140


>gi|78066136|ref|YP_368905.1| TPR-repeat pilus assembly protein TadD [Burkholderia sp. 383]
 gi|77966881|gb|ABB08261.1| Flp pilus assembly protein TadD contains TPRrepeats [Burkholderia
           sp. 383]
          Length = 275

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 14/163 (8%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL      A  QY+        +L  P         L   +   GD   A +   +
Sbjct: 90  PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLQQ 148

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++P        +    +   + + A   L +      E  +    +L    L     
Sbjct: 149 ATVLAPTDAATLSDLAYSQMRDGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLVS 204

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           G    +    ++  KL          A +  I  ++ + A  +
Sbjct: 205 GHGKDARRL-MDQQKLSP--------AVRGEIRDDETKIAAAM 238


>gi|17230685|ref|NP_487233.1| photosystem I assembly protein Ycf3 [Nostoc sp. PCC 7120]
 gi|21363092|sp|Q8YS98|YCF3_ANASP RecName: Full=Photosystem I assembly protein ycf3
 gi|17132288|dbj|BAB74892.1| all3193 [Nostoc sp. PCC 7120]
          Length = 173

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174
            E  VY  +   A AE +Y  A E  E  +     T +    +Y++       GD + A 
Sbjct: 33  KEAFVYYRDGMSAQAEGEYAEALEYYEEALTLEEDTNDRGYILYNMGLIYASNGDHDKAL 92

Query: 175 RYATKALDISPDAPWV--TEAVVQQYVLA-----KEWSRAITFLNQK 214
               +A++++P  P      AV+  Y         +        +Q 
Sbjct: 93  ELYHQAIELNPRLPQALNNIAVIYHYQGEKAKETGDHDGGEALFDQA 139


>gi|87307747|ref|ZP_01089890.1| probable DNA-directed RNA polymerase alpha chain [Blastopirellula
           marina DSM 3645]
 gi|87289361|gb|EAQ81252.1| probable DNA-directed RNA polymerase alpha chain [Blastopirellula
           marina DSM 3645]
          Length = 455

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
             +A      +      E  ++  +T   A++ L  E+ R G+   A  Y  KA    P 
Sbjct: 176 ATVAALGGNPSEVVALYERAVESDSTHAGALFGLALENDRRGNDEEALGYYQKAAACFPT 235

Query: 187 APWVTEAVVQQYVLAKE 203
                  ++   +L+++
Sbjct: 236 HV---GTLLNLGILSED 249


>gi|300940195|ref|ZP_07154796.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
 gi|300454983|gb|EFK18476.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
          Length = 1093

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G  ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|291296105|ref|YP_003507503.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279]
 gi|290471064|gb|ADD28483.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279]
          Length = 354

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 39/186 (20%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYSLYFESCRI 167
           +     +E +V  L   I + + +++ A +      +   + P+ R    Y         
Sbjct: 165 RSLALKDEPVVRALLADIYIRQGKWDEALKHYDEAVKAAPKNPSLRI--KYGSLL--LLR 220

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITF------------- 210
           G+++ A  +  +A+ +SP            Y   K+W +A                    
Sbjct: 221 GNVDLAIEHLDQAVILSPGNAEAWLRRGDAYYEKKDWQQAGVSYQQTVALSPVRYPDAYI 280

Query: 211 -LNQKKKNAKEWNRNRAILLIARSLENADK-------------GDMIASYHDAIESLKLC 256
            L Q     K++ + R     A +LE  +              GD   +     ++LKL 
Sbjct: 281 GLGQVLIELKDYQKARFNFTKAVALEQNNPVYRYWLCRANELLGDKAGAKEQCEQALKLR 340

Query: 257 DNSIMA 262
            +   A
Sbjct: 341 PDLKEA 346


>gi|75761434|ref|ZP_00741402.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74491068|gb|EAO54316.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 271

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 59/210 (28%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKN----------------AKEWNR-------------N 224
           + +       W  AI++     +                  +E+ R              
Sbjct: 27  LAETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAWQELKELDPE 86

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A L +  +     +G +  SY    E +K+ + S+   +  A       K  +AE +L+
Sbjct: 87  YASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVLQ 146

Query: 285 KIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS- 340
           K  +++P H  +     Y ++L E                 E  E L+ + + A++ G  
Sbjct: 147 KALELDPGH--LGATLKYAYILKEQ----------------EKYEDLIAIVERAIDSGEP 188

Query: 341 -----IDQAHAKAMLAMKIAP---RKEIFL 362
                 D A+AK  L M        +  + 
Sbjct: 189 DTQLLWDLAYAKKQLEMYSDALKHYESAYT 218


>gi|256221765|ref|NP_001157779.1| plectin isoform 1g [Rattus norvegicus]
          Length = 4551

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1407 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1466

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1467 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1526

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1527 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1564


>gi|241767993|ref|ZP_04765519.1| HemY domain protein [Acidovorax delafieldii 2AN]
 gi|241360780|gb|EER57676.1| HemY domain protein [Acidovorax delafieldii 2AN]
          Length = 191

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 32/113 (28%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   +    +  + + + +   +    +++ W       S  +++ +L            
Sbjct: 1   MRAALWLLALFGVAVAAALFAGNNQGTITLYWPPYRIDLSLNMVVLLLVSGFVTVYAALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
                L  P        ++     + A+   L  + A     +RK       Q
Sbjct: 61  ALAALLELPHQARRWRVQQKERAMHSAMLDALTHMLAGRFLRSRKAALAALGQ 113


>gi|256085583|ref|XP_002578997.1| pre-mRNA splicing factor [Schistosoma mansoni]
 gi|238664393|emb|CAZ35235.1| pre-mRNA splicing factor, putative [Schistosoma mansoni]
          Length = 340

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 41/178 (23%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224
            GD+ +A+    +A + +P++  +  A V+     KE++RA   L++   +A        
Sbjct: 9   AGDVPAARSILARAFEANPNSEEIWLAAVKLESENKEYARARRLLDKACASASTARVWMK 68

Query: 225 ------------RAILLIARS--------------------------LENADKGDMIASY 246
                       +A+ ++ ++                            N  +     + 
Sbjct: 69  AARLEWCLGELNKALEMLQKATLTYNQAPKLWLMLSQVYEQLSEENLKPNEAESLKERAR 128

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL 303
           +   E L    +     +  A+    Q    KA  ILEK    NP  PE+      L 
Sbjct: 129 NTYREGLNHNPHYTALWLQLARFEERQCNLTKARSILEKARSQNPKTPELWLEAIRLE 186


>gi|189424814|ref|YP_001951991.1| hypothetical protein Glov_1755 [Geobacter lovleyi SZ]
 gi|189421073|gb|ACD95471.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
          Length = 265

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 8/149 (5%)

Query: 133 ERQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             ++  A  +     ++            L   +        A+     A++  PD  + 
Sbjct: 87  AGRHQEALAQYRAVLLIDPQDADALVSIGLVHNALDQ--TEEAKAAFRLAIEHEPDNTFA 144

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             A+   Y  + +   AI    +  +   +     A   +     + ++ D      +  
Sbjct: 145 WNALGDLYYGSGDHKAAIEAYQKGIE--LDPTDPAAYHNLGELYYDLEEYDPAE--ENCK 200

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKA 279
            ++KL  +  MA +      + Q + + A
Sbjct: 201 IAVKLAPDFSMAYLTLGGICMDQERMKDA 229


>gi|217419730|ref|ZP_03451236.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
 gi|226199577|ref|ZP_03795134.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254187796|ref|ZP_04894308.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254296086|ref|ZP_04963543.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
 gi|157805914|gb|EDO83084.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
 gi|157935476|gb|EDO91146.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|217397034|gb|EEC37050.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
 gi|225928458|gb|EEH24488.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 606

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 51  DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 110

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP +    +      VL  + + A   L
Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 167

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
           +Q+   A   NR +AI+ +                                A + +    
Sbjct: 168 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 227

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L++  + + A++     L       +A  I      V  +P+     
Sbjct: 228 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 283

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 284 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 343

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           A +K      + ++ LAQI   + +N      W      A 
Sbjct: 344 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 383


>gi|40849904|gb|AAR95664.1| plectin 10 [Rattus norvegicus]
          Length = 4552

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1408 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1467

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1468 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1527

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1528 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1565


>gi|42526637|ref|NP_971735.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
 gi|41816830|gb|AAS11616.1| TPR domain protein [Treponema denticola ATCC 35405]
          Length = 725

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 30/278 (10%)

Query: 125 LEVQIAL----AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ Q A       +Q   A  +   M ++       V        + G+LNSA    +KA
Sbjct: 228 LDAQKAQEAERLAKQNADAKTR-AQMEEVDRLVSEGV-----NFLKNGNLNSALSSFSKA 281

Query: 181 LDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNR----------NRAIL 228
               PD+     A   +       +++ A       +K   + +             A  
Sbjct: 282 SSKMPDSETSFTAKKYLDMASALNDYASAREGTGDAEKALSDADSYIKKSVNADGQNARA 341

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
               S     +     ++ +  ++  L  ++ + +    K   ++   +KA+   E+  K
Sbjct: 342 HYVYSQIADAQKQPQVAFVELEKAQSLDPDNYLYNYELGKKYYARGHYQKAKTSFERSVK 401

Query: 289 VNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            NP  +     +      L  EN            +I  + V++ + +++I       DQ
Sbjct: 402 SNPKFDNAFFNLGMSCRKLGLENEA--FSAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQ 459

Query: 344 AHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILY 380
           A      A+   P        +AQ+      N     +
Sbjct: 460 AIENYKKAISYEPTNLPALREMAQVYADLGQNNLAERH 497



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 4/185 (2%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            ++ S      +    +L   +I  A+R+++ A E  +  +    T   A+  +      
Sbjct: 428 SAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQAIENYKKAISYEPTNLPALREMAQVYAD 487

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +G  N A+R+ T+A+ +  D       +    V  +++  A++   +  +       + A
Sbjct: 488 LGQNNLAERHFTEAITLGEDDAITYYNLATVQVDLEKYGEALSNAEKAYRLKP----SDA 543

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +L    L     G    +Y    ++     N     I   +  + + K  +AE  L   
Sbjct: 544 RVLYTYGLTLEKNGRKSEAYDYYTQAAATNKNYAKPRINLGRMYLDEGKFGEAEDNLLAA 603

Query: 287 WKVNP 291
           +++ P
Sbjct: 604 YRLEP 608


>gi|312973207|ref|ZP_07787379.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|310331802|gb|EFP99037.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
          Length = 843

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 265 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 324

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +   +L   P    V        VL+     A     +  ++
Sbjct: 325 LAARNGNFDAGLDFCQHSLRTCPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 379


>gi|300786250|ref|YP_003766541.1| hypothetical protein AMED_4366 [Amycolatopsis mediterranei U32]
 gi|299795764|gb|ADJ46139.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 1052

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 11/251 (4%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIG 168
                  +   ++    Q   A  +Y  A       L+I    T                
Sbjct: 623 RALELEPDRADMHAARGQALYALDRYPEALATFTRALEIEPDDTWLLGWRG--RVHRWQE 680

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
              SA   AT+ L++ PDA W  +   + + L      A+  L +  +   ++    A  
Sbjct: 681 SYASALADATRVLELEPDADWALDERGETHRLMGHHEEALADLTRAVEIDPQYAGAFARR 740

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
             A +    D G    +  D   SL++  +S++     A +         A     +  +
Sbjct: 741 GAAYA----DMGRWAEALADYDRSLEIQPSSVLTLGRRALAHRDSGNHGLAMADFARALE 796

Query: 289 VNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           +NP  +        TH L+      L    R  E++ E   ++   + +  ++G +++A 
Sbjct: 797 INPEADWIFRDRAQTHHLAGRLAEALADYDRTIELDPEYSWAVRQRALVLRDLGRLEEAL 856

Query: 346 AKAMLAMKIAP 356
                  +  P
Sbjct: 857 TSLTRLAEADP 867



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 96/277 (34%), Gaps = 12/277 (4%)

Query: 87  ALYTGLMSI----AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142
           A    L+++    AA      R +            E L+  L  ++A AE    +    
Sbjct: 460 ATADALVALVETAAARADQTGRWVAMVAQAGADSGREQLIA-LGARLAAAEDITALLTCL 518

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                     R  A  +L  E  R  D  +A    T+AL+  PD  W   +    Y +  
Sbjct: 519 TTESALPDMARFEAHQALALEHVRKDDFAAAVEALTRALEYDPDDGWALPSRGIAYRVLG 578

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           E  +++  L++      +     A  + AR            +  D   +L+L  +    
Sbjct: 579 ELEKSLADLDRAAGLDPDS----AWTIGARGETLQAMQRNEEALADFDRALELEPDRADM 634

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEE 319
                ++L + ++  +A     +  ++ P       +    H   E+    L  A R+ E
Sbjct: 635 HAARGQALYALDRYPEALATFTRALEIEPDDTWLLGWRGRVHRWQESYASALADATRVLE 694

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  ++  +L    +    MG  ++A A    A++I P
Sbjct: 695 LEPDADWALDERGETHRLMGHHEEALADLTRAVEIDP 731


>gi|241761936|ref|ZP_04760021.1| cellulose synthase operon C domain protein [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|241373616|gb|EER63188.1| cellulose synthase operon C domain protein [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
          Length = 1334

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 36/98 (36%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +I       + A      ML+       A+ +    + + G+ + A++   +   ++P 
Sbjct: 554 ARIYQDAGLTDKAQSLYHYMLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPG 613

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            P+V  A  +      +  +A+  L +  +  +   R 
Sbjct: 614 NPYVYLASARFEKSKSDDEQALKDLKKAHRVYQRMVRQ 651


>gi|218295326|ref|ZP_03496139.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23]
 gi|218243958|gb|EED10484.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23]
          Length = 738

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 67/233 (28%), Gaps = 21/233 (9%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +LLE +      +Y  A    +  L+    R  A   L        +   A+ Y  +AL 
Sbjct: 366 FLLEAEALRQAGRYREAEAAYQRALEAGEGR--AYLGLVRLFLDTVEPARARPYLEEALK 423

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGD 241
             P     +  + +  +       A+   L+  +   +    + A+ L+  + +      
Sbjct: 424 RFP--EEASPLLAENLLNEGRPEEALALGLSGPRVLLRLGRPDEALALLKEAQDPGLHRP 481

Query: 242 MIASYH-------------DAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIW 287
                              DA E L+  +     A +  +   +S  + RK   +L    
Sbjct: 482 PQNHREGTLLRALLECVAGDAEEGLRFAERGRFEAEVLGSPFGVSLAEARKGHALLALGR 541

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                                 +++    L  +     E+   + ++A   G 
Sbjct: 542 PAEARGAYQTALALAEGGPARLRVEALGGLAAL--GDREAYGEMVRLARAAGD 592


>gi|161869642|ref|YP_001598809.1| IgA-specific serine endopeptidase [Neisseria meningitidis 053442]
 gi|161595195|gb|ABX72855.1| IgA-specific serine endopeptidase [Neisseria meningitidis 053442]
          Length = 1787

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1128 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1172

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S  
Sbjct: 1173 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1224

Query: 185  --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                A     A  QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1225 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1283

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1284 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1335

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1336 ---SQPQRRKRRAA 1346



 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
             R ++K  +A       ++A     A +    ++ +     E        Q A   R++ 
Sbjct: 1043 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1093

Query: 138  IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190
               E  E+  +        R+ A      +  R     + Q Y   A    P       V
Sbjct: 1094 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1148

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             +  V+        ++A   L ++++      R  A LL  +  E   +   +A+   A 
Sbjct: 1149 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1197

Query: 251  --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              E+ +           AA+    Q  +RKA  +
Sbjct: 1198 AEEAKRQ----------AAELAHRQEAERKAAEL 1221


>gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1271

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 74/218 (33%), Gaps = 8/218 (3%)

Query: 81   YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            Y K Y  L  G ++     +  A   +     +         Y L + +    ++   A 
Sbjct: 1031 YAKSYHNL--GFLAAQQGQLEEAISYYQQAI-ESQPDYPSAFYNLGL-VYEQLKETEKAI 1086

Query: 141  EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
                  +Q+ +T      SL     R  +   A++Y   AL + P    +   +      
Sbjct: 1087 ACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYE 1146

Query: 201  AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +++ +A++   +  +         AI  +   +    +  +  +     ++++L  +  
Sbjct: 1147 QEKFDKAVSCFQKIIQAKP----QDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYA 1202

Query: 261  MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
            MA          Q  ++KA     +  + +P  ++A+ 
Sbjct: 1203 MAYYNLGVVYSCQPDEKKAVDCFRQSLRCDPANKLAHT 1240


>gi|154489873|ref|ZP_02030134.1| hypothetical protein PARMER_00102 [Parabacteroides merdae ATCC
           43184]
 gi|154089315|gb|EDN88359.1| hypothetical protein PARMER_00102 [Parabacteroides merdae ATCC
           43184]
          Length = 463

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 96/281 (34%), Gaps = 20/281 (7%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +I    I  A++ +  V    + +      L   ++      Y  A E   ++  I    
Sbjct: 42  AINFGRIAEAKQCYRKVLGTDSMNFYANYQL--ARLYYQLGDYGRATEHYHILASIEGEN 99

Query: 154 EFAVYSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
              +  L     + G   +   A     +AL+++P+   V  +++   +   +   A+  
Sbjct: 100 PSILTGLADCHIKRGTGPNTMIALSLYARALELNPENVRVASSLINTLLRMGDGQGALQV 159

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +       + ++ R       +L          S +  + +        +    AA+ +
Sbjct: 160 CDTALFYNPDNSQIRQS--KGMALYMTKDYKQADSVYTGLLADGDSSFLNLKYAGAARYM 217

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLV 329
            S         +LEK ++++   ++  +  +  S   T  + KRA  L ++ + +++   
Sbjct: 218 SSH--ALDGVELLEKAYEIDST-DVETVMLYGASLGKTYDR-KRAYELFDLAETNMQPKK 273

Query: 330 IVSK-------IALEM-GSIDQAHAKAMLAMKIAPRKEIFL 362
            +          ALE  G   +A      A K  P +  FL
Sbjct: 274 FLVNMLTTFRGDALERDGRWPEAEKLYYAAWKEDPTQLHFL 314


>gi|133778672|gb|AAI33909.1| Tmtc4 protein [Danio rerio]
          Length = 490

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 6/103 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            +++W    +                A +        AD+G+  A+     E+++L    
Sbjct: 209 RSQQWRSEQSLFTSALSVCP----LNAKVHYNVGKNLADRGNQSAAVQYYREAVRLHPKY 264

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           + A       L  +N+ ++AE +L     V+  P+ A  + +L
Sbjct: 265 VHAMNNLGNILKERNELKEAEELLSAA--VHIQPDFAAAWMNL 305


>gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
          Length = 581

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 9/203 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + + G   +  R A +AL +     +             ++  AI   N   +   +   
Sbjct: 270 ANKKGREQTMVRLADQALKLR-KTGFAYIMRAYAKNDLGDYQGAIDDQNNALEINPD--- 325

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+  + R L  ++ GD  ++  D  +++K+   + MA      S  +    + A    
Sbjct: 326 -NAVAYVNRGLARSNMGDPKSALSDFSKAIKIDPANAMAFSNRGVSKQALGDPQGALDDY 384

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVG---KLKRALRLEEINKESVESLVIVSKIALEMGS 340
            K  K++P    A     +   +       +    +   IN +  ++        LE   
Sbjct: 385 NKAIKIDPRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKD 444

Query: 341 IDQAHAKAMLAMKIAPR-KEIFL 362
              A A    A++I  +   I+L
Sbjct: 445 YQGAIADYNKAIRIGTQNARIYL 467


>gi|84625065|ref|YP_452437.1| hypothetical protein XOO_3408 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369005|dbj|BAE70163.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 562

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 20/250 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L +A+     
Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 372

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-- 296
            D+  +  D  + L     ++ A +           + ++A  ++++    +P   +A  
Sbjct: 429 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPD-NLAIV 487

Query: 297 -----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                 +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A
Sbjct: 488 DSYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEA 543

Query: 352 MKIAPRKEIF 361
            ++ P     
Sbjct: 544 RRLDPDNRAL 553


>gi|15832669|ref|NP_311442.1| hypothetical protein ECs3415 [Escherichia coli O157:H7 str. Sakai]
 gi|209397136|ref|YP_002272022.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|13362886|dbj|BAB36838.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|209158536|gb|ACI35969.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209763060|gb|ACI79842.1| hypothetical protein ECs3415 [Escherichia coli]
 gi|209763062|gb|ACI79843.1| hypothetical protein ECs3415 [Escherichia coli]
 gi|209763066|gb|ACI79845.1| hypothetical protein ECs3415 [Escherichia coli]
          Length = 1124

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|325473179|gb|EGC76375.1| TPR domain-containing protein [Treponema denticola F0402]
          Length = 629

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 30/278 (10%)

Query: 125 LEVQIAL----AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L+ Q A       +Q   A  +   M ++       V        + G+LNSA    +KA
Sbjct: 132 LDAQKAQESERLAKQNADAKTR-AQMEEVDRLVSEGV-----NFLKNGNLNSALSSFSKA 185

Query: 181 LDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNR----------NRAIL 228
               PD+     A   +       +++ A       +K   + +             A  
Sbjct: 186 SSKMPDSETSFTAKKYLDMASALNDYASAREGTGDAEKALSDADSYIKKSVNADGQNARA 245

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
               S     +     ++ +  ++  L  ++ + +    K   ++   +KA+   E+  K
Sbjct: 246 HYVYSQIADAQKQPQVAFVELEKAQSLDPDNYLYNYELGKKYYARGHYQKAKTSFERSVK 305

Query: 289 VNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            NP  +     +      L  EN            +I  + V++ + +++I       DQ
Sbjct: 306 SNPKFDNAFFNLGMSCRKLGLENEA--FSAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQ 363

Query: 344 AHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILY 380
           A      A+   P        +AQ+      N     +
Sbjct: 364 AIENYKKAISYEPTNLPALREMAQVYADLGQNNLAERH 401



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 68/185 (36%), Gaps = 4/185 (2%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            ++ S      +    +L   +I  A+R+++ A E  +  +    T   A+  +      
Sbjct: 332 SAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQAIENYKKAISYEPTNLPALREMAQVYAD 391

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +G  N A+R+  +A+ +  D       +    V  +++  A++   +  +       + A
Sbjct: 392 LGQNNLAERHFKEAITLGEDDAITYYNLATVQVDLEKYGEALSNAEKAYRLKP----SDA 447

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +L    L     G    +Y    ++     N     I   +  + + K  +AE  L   
Sbjct: 448 RVLYTYGLTLEKNGRKSEAYDYYTQAAATNKNYAKPRINLGRMYLDEGKFGEAEDNLLAA 507

Query: 287 WKVNP 291
           +++ P
Sbjct: 508 YRLEP 512



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 72/237 (30%), Gaps = 13/237 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+     Q N+A    +  + +        Y+L      +     A   A KA  + P
Sbjct: 385 MAQVYADLGQNNLAERHFKEAITLGEDDAITYYNLATVQVDLEKYGEALSNAEKAYRLKP 444

Query: 186 ---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                 +     ++        S A  +  Q     K + + R  L         D+G  
Sbjct: 445 SDARVLYTYGLTLE---KNGRKSEAYDYYTQAAATNKNYAKPRINL----GRMYLDEGKF 497

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IY 299
             +  + + + +L  N+   +    K    +    K+        K  P    A      
Sbjct: 498 GEAEDNLLAAYRLEPNNFEVNTNLGKLYGLKGDYTKSVNHYSNAVKTQPRNITAKQNLAA 557

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            ++ ++     +    ++ +++ ++ ++   + K+ + +     A       +   P
Sbjct: 558 AYISADLKENAVSVYEQIIKVDTKNWDAYYELGKLYISLNKKADAKLILEGVLNKNP 614


>gi|301621778|ref|XP_002940222.1| PREDICTED: tetratricopeptide repeat protein 1-like [Xenopus
           (Silurana) tropicalis]
          Length = 241

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              E+  A T   Q  +    +     AIL   R+     +     +  D  ++++L  +
Sbjct: 77  KNGEYPAAETVYTQALQTCPAFYSQDLAILFSNRAAARMRQNMNDLALEDCSKAIELNPD 136

Query: 259 SIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHPE 294
            I A +  A+     +K  +A      +LEK    NP  E
Sbjct: 137 YIRALLRRAELYEKTDKLDEALADYKSVLEKDPSANPARE 176


>gi|303324457|ref|XP_003072216.1| Cell cycle control protein cwf4, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240111926|gb|EER30071.1| Cell cycle control protein cwf4, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|320037256|gb|EFW19194.1| pre-mRNA-splicing factor clf1 [Coccidioides posadasii str.
           Silveira]
          Length = 671

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 73/243 (30%), Gaps = 26/243 (10%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           +++  A    +  + ++P ++   ++  Y    +  GD              +Y  + + 
Sbjct: 257 KEHERARAIYKYALDRLPRSKSAVLHKAYTTFEKQYGDQEGVEDVILSKRRVQY-EEQVK 315

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-EN 236
            +P         ++    +    R      +              R    L I  +L E 
Sbjct: 316 ENPKNYDAWFDYIRLEEASGNVERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEE 375

Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +  D   +     E LKL            +  A+  I Q   R A   L       P 
Sbjct: 376 MENHDFGRARQIYQECLKLIPHKKFTFAKVWLLKAQFEIRQMDLRAARRTLGHALGACPK 435

Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            ++   Y  L     E    +     +  E N    ++ +  +++   +  +++A A   
Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSQTQAWIKFAELERGLDDLERARAIYE 494

Query: 350 LAM 352
           L +
Sbjct: 495 LGI 497


>gi|254483490|ref|ZP_05096718.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036279|gb|EEB76958.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 573

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 4/139 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             +   A  +L+ +         A  +L     + GD  +A  +A +A  ++P+A    +
Sbjct: 386 AGKTPQAIAELQALTSAYPEYADAHNNLAVLLLQKGDYTAASTHAARATQLAPEAAAPWD 445

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +      A    +A   L++  +   ++        + R L   D+ D   +  D   +
Sbjct: 446 ILGAAQAGAGLPDQAADSLDKSLQRRPDYWS----AHLHRGLLRVDQKDYQGAQADLEAA 501

Query: 253 LKLCDNSIMASICAAKSLI 271
           L        A +       
Sbjct: 502 LANGGPLPDAYLALGDLYA 520


>gi|171057693|ref|YP_001790042.1| tetratricopeptide repeat-containing protein [Leptothrix cholodnii
           SP-6]
 gi|170775138|gb|ACB33277.1| Tetratricopeptide TPR_4 [Leptothrix cholodnii SP-6]
          Length = 441

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 50/166 (30%), Gaps = 10/166 (6%)

Query: 90  TGLMSIAAHNI--PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
             L++ A        AR++ +    +     +      + + AL+    + A   L   +
Sbjct: 282 DALLARAEGEPAPRHARRVEAAAPARLQSLRD------QARSALSAGDADRAMALLRQAV 335

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           Q        +      + + GDL +A   A +AL + P        +        E   +
Sbjct: 336 QAAPQDVEILADTAALAFQRGDLATAVPMARRALLLEPQHAASQFTLAMSLAALGEQHES 395

Query: 208 ITFLNQKKKN--AKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           ++  +       A+ +      L    + ++            A+ 
Sbjct: 396 LSLFDGLMHADCARSFRTEHPELAAIAARQSHHLLQQQQQRSTALA 441


>gi|119173787|ref|XP_001239287.1| hypothetical protein CIMG_10309 [Coccidioides immitis RS]
          Length = 671

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 73/243 (30%), Gaps = 26/243 (10%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           +++  A    +  + ++P ++   ++  Y    +  GD              +Y  + + 
Sbjct: 257 KEHERARAIYKYALDRLPRSKSAVLHKAYTTFEKQYGDQEGVEDVILSKRRVQY-EEQVK 315

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-EN 236
            +P         ++    +    R      +              R    L I  +L E 
Sbjct: 316 ENPKNYDAWFDYIRLEEASGNVERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEE 375

Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +  D   +     E LKL            +  A+  I Q   R A   L       P 
Sbjct: 376 MENHDFGRARQIYQECLKLIPHKKFTFAKVWLLKAQFEIRQMDLRAARRTLGHALGACPK 435

Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            ++   Y  L     E    +     +  E N    ++ +  +++   +  +++A A   
Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSQTQAWIKFAELERGLDDLERARAIYE 494

Query: 350 LAM 352
           L +
Sbjct: 495 LGI 497


>gi|15803074|ref|NP_289105.1| hypothetical protein Z3825 [Escherichia coli O157:H7 EDL933]
 gi|12516959|gb|AAG57663.1|AE005485_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 1124

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663


>gi|70988899|ref|XP_749301.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus Af293]
 gi|66846932|gb|EAL87263.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus Af293]
 gi|159128715|gb|EDP53829.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus A1163]
          Length = 630

 Score = 39.9 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 9/182 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+     ++  A +  +  + +  T  F+   L     ++G + SA     +++    
Sbjct: 417 RAQLHFILGEFAEAAKDYQKSIDLDRTFIFSHIQLGVTQYKMGSVASAMATFRRSVKNFE 476

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENAD-KGDM 242
           D P V     +  +  + +S AI   ++  +  K+        + LI ++L     K D 
Sbjct: 477 DVPDVYNYYGELLLDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDF 536

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             + +   ++L +     +A    A+ L+ Q K  +A    E+        E+A     +
Sbjct: 537 QEAENLCQKALIIDPECDIAVGTMAQLLLQQGKVSQALKYFERA------AELARTEAEI 590

Query: 303 LS 304
           ++
Sbjct: 591 VN 592


>gi|307297487|ref|ZP_07577293.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916747|gb|EFN47129.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 356

 Score = 39.9 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 59/165 (35%), Gaps = 15/165 (9%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
               ++  A  FL+       + N ++A +   +     + GD          +LK+  +
Sbjct: 107 ADRGDYESAQKFLDLLM----DANVDKATVCELKGSIFLESGDEEEGIKWLQNALKIDSS 162

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWK--VNPHPEIANIY-----THLLSENTVGKL 311
            + A     ++  ++     A       W+  +   P+    Y      ++ +      L
Sbjct: 163 LVTAYSFLGQTFYNRGDFDSAA----DCWQREIAASPDHLVTYFMLTDAYINAGRMDEAL 218

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                L + + +S+ + V ++++  +MG+I+         +K  P
Sbjct: 219 NVLKDLSKRDPDSILTKVEMAELYEKMGNIEMRRIVEDEVLKTKP 263


>gi|190893450|ref|YP_001979992.1| O-linked GlcNAc transferase [Rhizobium etli CIAT 652]
 gi|218514313|ref|ZP_03511153.1| probable O-linked GlcNAc transferase protein [Rhizobium etli 8C-3]
 gi|190698729|gb|ACE92814.1| probable O-linked GlcNAc transferase protein [Rhizobium etli CIAT
           652]
          Length = 288

 Score = 39.9 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q   A   ++ A +     L     R +    L ++     D   A    +KA+ ++P
Sbjct: 151 AGQDDQAFNDFDRAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++P         Y+   +   A    N    +A E N N A     ++L    +GD   +
Sbjct: 204 NSPEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQN 274
                 ++ L      A    A+   S  
Sbjct: 260 ARSYRHAVGLDPKYQPARDGLARVGASAG 288


>gi|159038656|ref|YP_001537909.1| fibronectin type III domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157917491|gb|ABV98918.1| Fibronectin type III domain protein [Salinispora arenicola CNS-205]
          Length = 528

 Score = 39.9 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 77/288 (26%), Gaps = 34/288 (11%)

Query: 232 RSLENADKGDMIASYHDAIESLKLC--------DNSIMASICAAKSLISQNKKRKAEVIL 283
           R+L     GD+  +     ++++             + A+   A+          A  +L
Sbjct: 13  RALALRQAGDLAGARLLLTDTVESASPPYGPDHPEMLGAAHLLARLHREAGDPSSARRVL 72

Query: 284 EKIWKV----NPHPE---IANIY-THLLSENTVGKL---KRALRLEEINKE---SVESLV 329
           E+         P  +   +A  +    L++    +    +   RL     +   +    V
Sbjct: 73  EEALAAGERCRPDDDPLMLALAFELATLADELGNRHEARRNFRRLVAAGPDVLGTDHPAV 132

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
             ++  L+      A   ++    + P    F  +           + +   T  A    
Sbjct: 133 REARAYLDDAGPSPADGPSVPGPVL-PGYRAFGSVTAPVADERLAEEPVRPGTSPAPDGS 191

Query: 390 PDPLWISDDGYLSSVWLPLSPISKTLCYFE--WK----IPTKSPEYISSENINFSLEMAY 443
           PD     D G+L   W P+   S +    +  W      P  S     +   +    +  
Sbjct: 192 PD-----DSGHLVPHWPPVGSASGSSEARQQGWPQGLGSPLGSIGAGPAPGASGPDPVLE 246

Query: 444 PADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491
           P                     ++           P  R     G+ E
Sbjct: 247 PGPARCGDGRVAADAAPSDAAPLTDAHTDPASRPSPTGRGTATNGLPE 294



 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 15/142 (10%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPW---VTEAVVQQYVLAKEWS 205
             AV        + GDL  A+   T  ++ +     PD P        + + +  A + S
Sbjct: 7   LAAVQHRALALRQAGDLAGARLLLTDTVESASPPYGPDHPEMLGAAHLLARLHREAGDPS 66

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM---- 261
            A   L +     +    +   L++A + E A   D + + H+A  + +    +      
Sbjct: 67  SARRVLEEALAAGERCRPDDDPLMLALAFELATLADELGNRHEARRNFRRLVAAGPDVLG 126

Query: 262 ---ASICAAKSLISQNKKRKAE 280
               ++  A++ +       A+
Sbjct: 127 TDHPAVREARAYLDDAGPSPAD 148


>gi|115893595|ref|XP_001182254.1| PREDICTED: similar to transmembrane and tetratricopeptide repeat
           containing 2, partial [Strongylocentrotus purpuratus]
          Length = 149

 Score = 39.9 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 3/118 (2%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G++  +     ESL+   + + A +  A  L   N+  +AE +LE+   +   PE AN++
Sbjct: 7   GNLPEAESWFKESLRSKADHVPAHLTYANLLGKTNRATEAERLLERAVSLE--PENANVF 64

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            H   +N   ++       ++  +     V +  +    G ++QA A  + A+ + P 
Sbjct: 65  RHYAKDNEKAEVY-YRVAVDLKPDVANGHVNLGAMLHLNGKLEQAQASYLKALSLKPD 121


>gi|78064816|ref|YP_367585.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77965561|gb|ABB06941.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 732

 Score = 39.9 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 21/311 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL   L    A  +  A+ ++  +           ++ L +     ++         + 
Sbjct: 6   QALQAALAHHEAGRLAEAKTLYDAILTAQ-PGQPDALHFLGLLACQLKQYDAGIALMEQS 64

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           +++ P    F            G L+ A  +  +A+ + PD P     +      A+E +
Sbjct: 65  LVERPDASYFNNLGNML--RENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDAREPA 122

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+    +  +    +    A   +  +L+  D GD   +      +++L  +  MA   
Sbjct: 123 AAMESCARAIELRPGY--AEAYNNLGNALQ--DLGDFDRAASHYGRAIELDPSMAMA--H 176

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRA----LRLEEI 320
           A  S +   + R AE +      +   P +A+ + H   + + + +L  A         +
Sbjct: 177 ANLSAVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTL 236

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
           N     +   +S + L++  +D+A      A++  P        A +   N  +  +   
Sbjct: 237 NPADAGACHNLSVVLLKLQRLDEALVYCRQALQAGPP-------AALMHVNLGDILRAQG 289

Query: 381 WTQSALHAMPD 391
              +A+HA  D
Sbjct: 290 NVDAAVHAYRD 300


>gi|326928324|ref|XP_003210330.1| PREDICTED: tetratricopeptide repeat protein 1-like [Meleagris
           gallopavo]
          Length = 296

 Score = 39.9 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                E+  A     +  +     + ++RA+L   R+     +    A+ +D  ++++L 
Sbjct: 130 QFKRGEYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALNDCSKAVELD 189

Query: 257 DNSIMASICAAKSLISQNKKRKAE----VILEK 285
            N I A +  A+      K  +A      ILEK
Sbjct: 190 PNYIRALLRRAELHEKTEKLDEALEDYKAILEK 222


>gi|284039937|ref|YP_003389867.1| hypothetical protein Slin_5093 [Spirosoma linguale DSM 74]
 gi|283819230|gb|ADB41068.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 590

 Score = 39.9 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 62/234 (26%), Gaps = 16/234 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            L   Q + A    E      A        L   +   GD  +A+     A+  +     
Sbjct: 67  YLRSGQLDKAKATFEKGAAADAKNYLNNIGLAGVAMAKGDGATAKGLIDNAVAQTKSKNQ 126

Query: 190 ------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                      +       + + A++ L     + K+     A + +        K D  
Sbjct: 127 DVLIRGAEMYTLSDQPKQNDPAAALSLLT--VADEKDKKNENAEIEMLMGDAYFLKNDGG 184

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +      +L +  N   A+    +  +     +KA+   +   + +   E A  Y    
Sbjct: 185 NAITKYENALAINPNLAEANYKIGRLYLRGKNYQKAQDFFKLAIQNDA--EFAPTYRAYA 242

Query: 304 SENTVGKLKRALR----LEEINKE--SVESLVIVSKIALEMGSIDQAHAKAMLA 351
                 +  +A      L          E L+ V++          A A     
Sbjct: 243 DALANSRAYKAAASNYELYVQKSGTTDPEMLLDVARYKFLAQDYQGAIAYLDQL 296


>gi|262274789|ref|ZP_06052600.1| hypothetical fimbrial biogenesis and twitching motility protein
           [Grimontia hollisae CIP 101886]
 gi|262221352|gb|EEY72666.1| hypothetical fimbrial biogenesis and twitching motility protein
           [Grimontia hollisae CIP 101886]
          Length = 251

 Score = 39.9 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 12/211 (5%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           DA      +   Y+ A +W RA   L    + A ++ R+R            + G+   +
Sbjct: 34  DAAESRITLGLAYLKAGQWERARQNLETAVQFAPKYYRSRISFAYY----LQEVGEYDQA 89

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIY 299
                 +L+    +          L  Q +  +A+    K       +K++   E A + 
Sbjct: 90  EEQYKTALRHSPQNGDVRNNYGVFLCRQERYDEAQRAFAKAIEQPYYYKLSGSYENAALC 149

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK- 358
                +    K+  A  + +       S V ++++ +E   +++A  +     K    K 
Sbjct: 150 ALKEGDRDSAKVWFAKAI-DHEPNRPLSSVKLAQMEVEDNQLNEARIRLFHFHKRYGYKP 208

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
              L+L ++E      +    Y    A    
Sbjct: 209 ATLLILTELENKAGRPSQAERYANLLANTFP 239


>gi|223939851|ref|ZP_03631720.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223891443|gb|EEF57935.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 442

 Score = 39.9 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 13/188 (6%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL ++P            Y    E ++A+  L+                   R L    K
Sbjct: 31  ALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGDSR------AYSTRGLIYDKK 84

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G+   +  D  E ++L      A     ++  ++    +A     +  ++N  P+ A  +
Sbjct: 85  GEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELN--PKYAEAF 142

Query: 300 THLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               +   + +     +       +    +  S     +        +QA      A+++
Sbjct: 143 FDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYSEAVRL 202

Query: 355 APRKEIFL 362
             R+ ++L
Sbjct: 203 NSREALYL 210


>gi|172046711|sp|Q3M690|YCF3_ANAVT RecName: Full=Photosystem I assembly protein ycf3
          Length = 173

 Score = 39.9 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174
            E  VY  +   A AE +Y  A E  E  +     T +    +Y++       GD + A 
Sbjct: 33  KEAFVYYRDGMSAQAEGEYAEALEYYEEALTLEEDTNDRGYILYNMGLIYASNGDHDKAL 92

Query: 175 RYATKALDISPDAPWV--TEAVVQQYVLA-----KEWSRAITFLNQK 214
               +A++++P  P      AV+  Y         +        +Q 
Sbjct: 93  ELYHQAIELNPRLPQALNNIAVIYHYKGEKAKEDGDHDGGEALFDQA 139


>gi|126307976|ref|XP_001366974.1| PREDICTED: similar to tetratricopeptide repeat protein [Monodelphis
           domestica]
          Length = 499

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 184 KILKAECLALLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 241

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 242 LRMAPDHEKACLACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 301

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   NA    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 302 YCNRGTVNAKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQFEEAVRDYEKVYQ 361

Query: 289 VN 290
             
Sbjct: 362 TE 363


>gi|116695367|ref|YP_840943.1| CadC family transcriptional regulator [Ralstonia eutropha H16]
 gi|113529866|emb|CAJ96213.1| transcriptional regulator, CadC-family [Ralstonia eutropha H16]
          Length = 515

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 10/155 (6%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q         +A   +E+               +      GDL+       +AL ++P+ 
Sbjct: 323 QPGEIAEGTRLARLAVELGRDD---AVALTRGAHALGHLTGDLDGGIALFDRALLLNPNH 379

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENADKGDMIA 244
                     +    E   AI +L +  + +    E  R +A      +L +   G   A
Sbjct: 380 APAWSLCGCLHACRGETDAAIKYLARAVRLSPLDPEMFRMQA----GMALAHFFAGRFDA 435

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +   A  +     + +      A S     +  KA
Sbjct: 436 ASDWAERAKCNLPSFLAPVGILAASHALAGRMDKA 470


>gi|111019382|ref|YP_702354.1| transcriptional regulator [Rhodococcus jostii RHA1]
 gi|110818912|gb|ABG94196.1| probable transcriptional regulator [Rhodococcus jostii RHA1]
          Length = 900

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 78/272 (28%), Gaps = 48/272 (17%)

Query: 132 AERQYNIAHEKLEMM-----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
           A  +   A    + +     L   + R          +    D  SA++    A+  +  
Sbjct: 515 ATGRIVEARAAYDTLSAKIALGAQSQRFDMARGWLDLAL--DDPESARQELESAVPTAFR 572

Query: 185 ----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENAD 238
                 + W    + +      +WS AI  +++     ++   +  R ++    +  +A 
Sbjct: 573 MGSTRISLWAQAWLARTQFALGDWSGAIATVDRAAHQLEDAALDLVRPLVHWTGAQTHAL 632

Query: 239 KGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292
           +G+  A+      +     +     I +S+  A+    Q         LE + +++P   
Sbjct: 633 RGNWPAAQEHLRLAAASSHDYPMMFIPSSLARAQCAEVQADYAAVIRALEPLTRLHPREG 692

Query: 293 ---------PEI-------------ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
                    P++             A+ +     E    +  R+              V 
Sbjct: 693 IDEPGFWQWPDVYANALVMAGRVDDADAFLTPHEERASERGHRS---AMARLGYARGRVA 749

Query: 331 VSKIALEMGS--IDQAHAKAMLAMKIAPRKEI 360
            ++  ++      + A            R  +
Sbjct: 750 GARGDIDAARDVFETALTHLDTLPLPYDRARV 781


>gi|110635134|ref|YP_675342.1| TPR repeat-containing protein [Mesorhizobium sp. BNC1]
 gi|110286118|gb|ABG64177.1| TPR repeat [Chelativorans sp. BNC1]
          Length = 291

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 8/147 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                +   A +  E  +Q+  T  R +    L +++   G    A     KA+ ++PD 
Sbjct: 144 YRLAGRSTEAFQDFEKAIQLDTTDPRAYHRRGLLYQA--SGQHQYAIEDFAKAISLAPDQ 201

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P+        Y+   +   A T  N   +     N   A     ++L    +G+M  +  
Sbjct: 202 PYGYNGRGLSYLALGDDENAFTDFNTAIR----LNEQLAESWANQALVYEKRGEMDKAAR 257

Query: 248 DAIESLKLCDNSIMASICAAKSLISQN 274
               +L L  N   A    A++  +  
Sbjct: 258 SYARALSLDANYTPARDGVARTQGAGG 284


>gi|264677559|ref|YP_003277465.1| hypothetical protein CtCNB1_1423 [Comamonas testosteroni CNB-2]
 gi|262208071|gb|ACY32169.1| Tetratricopeptide TPR_4 [Comamonas testosteroni CNB-2]
          Length = 385

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 177 ATKAL---DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232
           A +AL   + +        A++  Y  +++W++A   + + +   + +++   A  L   
Sbjct: 128 AEEALNRLEGTQYEGEARLALLAIYERSRDWAQAAAIVRKMQAAGQGDFSTRLAHYLCED 187

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +      G +  ++    ++L+    +    +  A+    Q +  +A   L+ 
Sbjct: 188 AQSQVAHGQLDKAFAQLQQALETAPQAPRPRLELAQLQHRQGRSAQALSSLQA 240


>gi|256221435|ref|NP_071796.2| plectin isoform 1 [Rattus norvegicus]
          Length = 4687

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1602

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1603 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1662

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1663 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1700


>gi|212703178|ref|ZP_03311306.1| hypothetical protein DESPIG_01220 [Desulfovibrio piger ATCC 29098]
 gi|212673444|gb|EEB33927.1| hypothetical protein DESPIG_01220 [Desulfovibrio piger ATCC 29098]
          Length = 576

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 14/257 (5%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATR---EFAVYSLYFES 164
              +      +   + L       E ++   A   L+ ML  P         +  +  + 
Sbjct: 279 KALKYFRKGPDAAAFKLTAISMFLESRHYLQAERLLKEMLDEPGVPPDVFLMLAGIARDQ 338

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  D   A  +  +    SP A        Q    A +   A+  +    ++ ++ +  
Sbjct: 339 RR--DTELALSWLARIPATSPTAVQAEGLKAQILADAGKEKEALASV----RDLQQRHAR 392

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              LL+      A    M  +   A +++++   S   +      L S  K+ +A  +++
Sbjct: 393 NETLLLLEVRLLARLKAMDEALARARQAVEIVPESSELAFTLGSLLDSLGKRDEAMKVMQ 452

Query: 285 KIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            I   +P    A  Y      +  ++    L+   R + +  +    +  ++     +G 
Sbjct: 453 GIIASHPEHYQALNYVGYSLAVQGKDLEHALELLQRADRLAPDQFFIVDSLAWALFRLGR 512

Query: 341 IDQAHAKAMLAMKIAPR 357
            ++A      A+ + P 
Sbjct: 513 TEEALQTIRRAVALVPS 529


>gi|184201355|ref|YP_001855562.1| putative glycosyltransferase [Kocuria rhizophila DC2201]
 gi|183581585|dbj|BAG30056.1| putative glycosyltransferase [Kocuria rhizophila DC2201]
          Length = 345

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 8/83 (9%)

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           +   + K   RL   +  +  S    ++ A+  G    A      A ++ P +    L A
Sbjct: 258 SPEERDKLLTRLRNGSPLAAASD---AEQAMREGRTRDAREHLETAARMMPSQRRVALKA 314

Query: 366 QIEQANSHNTDKILYWTQSALHA 388
           +I +         ++W      A
Sbjct: 315 RIARVPGG-----MHWLVRRQRA 332


>gi|149022136|gb|EDL79030.1| similar to tetratricopeptide repeat domain 21B (predicted) [Rattus
           norvegicus]
          Length = 933

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 101/320 (31%), Gaps = 66/320 (20%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA------------- 139
           +++A  +   A  M   V+ +              Q    E +  +A             
Sbjct: 603 LALAQGDTERALSMLRNVTTE--------------QPYFIEAKEKMADIYLKHRKEKMLY 648

Query: 140 HEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
                 + +  P+ R F +         I +   A     +AL+ +P    +   + +  
Sbjct: 649 ITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQALNQNPKDGTLARKIGKAL 706

Query: 199 VLAKEWSRAITFLNQKKKNAKE----------------WNRNRAILLIARSLENADK--G 240
           V    +S+AIT+     K+ ++                + +   +L  + + +  ++   
Sbjct: 707 VKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKAEKVLQHSLAHDPVNELSA 766

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HP 293
            M+      + +             AA     + + R    IL+++    P       H 
Sbjct: 767 LMVDGRSQVLLAKVYSKMERPGDAIAALQQARELQAR----ILKRVQMEQPDAVPSQRHF 822

Query: 294 EIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKA 348
             A I   +   +   +  ++A+          E+    ++ ++++ L    +D +    
Sbjct: 823 A-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLELAQLYLAQEDLDASLRHC 881

Query: 349 MLAMKIAPR-KEIFLLLAQI 367
            L ++     +   +L+A +
Sbjct: 882 ALLLQRDQDNEPATMLMADL 901


>gi|40849896|gb|AAR95660.1| plectin 6 [Rattus norvegicus]
          Length = 4688

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1544 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1603

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1604 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1663

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1664 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1701


>gi|71407511|ref|XP_806219.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70869899|gb|EAN84368.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 646

 Score = 39.9 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 4/102 (3%)

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             A VQ+ +    +  A+  L++        NR   ++L +R+  N   G    +  DA+
Sbjct: 221 QLAAVQKSLSEGAYEEALKLLDK--LPLNAVNRVDILVLRSRA--NIFLGRYEEALKDAL 276

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           E+++     +  ++ AA++     K  KA   + +   + PH
Sbjct: 277 EAIEEEPRWVKGNLAAARAFSGLCKFEKAAQQIHRAMLLLPH 318


>gi|323166986|gb|EFZ52725.1| cellulose synthase operon C domain protein [Shigella sonnei 53G]
          Length = 531

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL     + A    +    +  T  +AV  L   +    D  +A+RY  + L +  
Sbjct: 340 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 399

Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241
                    A + +    ++    I  L+  ++ + +      +   L  ++    ++G 
Sbjct: 400 GNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 459

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              +     + L L   S+  +   ++ L    ++ +A+ +
Sbjct: 460 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTL 500


>gi|309792402|ref|ZP_07686869.1| Tetratricopeptide TPR_2 repeat protein [Oscillochloris trichoides
           DG6]
 gi|308225557|gb|EFO79318.1| Tetratricopeptide TPR_2 repeat protein [Oscillochloris trichoides
           DG6]
          Length = 1091

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 29/198 (14%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E+ R G    + + A +AL   P       A         +  RA+          +  
Sbjct: 16  REAARGGRWEESLKSAIRALQEFPQDTDARIAAAVALFNTGKLDRALQIFT----ELRAA 71

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           + N A  L   +  ++ +G+  A+                     A   ISQ +  +A  
Sbjct: 72  DPNNAFHLNYIAQGHSRQGNTQAAIESYRA--------------LADLHISQRRPAQAVE 117

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L +I  + P             ++   +L R        +++    + +++   E    
Sbjct: 118 PLREILNLRP-----------DMDDQRQRLARLFEEIGSVRDAANEYLALARRLHEAQQY 166

Query: 342 DQAHAKAMLAMKIAPRKE 359
           D+A   A   +++ P   
Sbjct: 167 DRAAEAAETVLRLDPNSR 184


>gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 652

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 51/178 (28%), Gaps = 6/178 (3%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           ++ L+        +   A    E ++ +  TR  A          +G    A     +++
Sbjct: 453 IHFLKGCSLEMLGRAEEALTAFEQVIHLEPTRISAYSHKGILLRTLGRHEEALEAFEQSI 512

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            + P      +A  +          A+    Q  +         A +  ++ L       
Sbjct: 513 RLDPTNADAYQAKGEVLDTLGRLEEALEAFEQSIRLNP----KDASVYFSKGLTLWGLKH 568

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           M  +  +   +++L   +          L       +A   LE   ++   P  A  Y
Sbjct: 569 MEEALANFEYAIQLDPKNATFYRTKGILLRIIGHNEEALTALEYAVQLR--PNDAEAY 624


>gi|289618999|emb|CBI54267.1| unnamed protein product [Sordaria macrospora]
          Length = 734

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 15/186 (8%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + ++ A +  +  +   P +++     L     +I D     +     L   P       
Sbjct: 91  KNFDEAIKAYKFALKLEPESQQI-QRDLAVLQVQIRDYQGYVQSRFAMLKAKPHLRQNWT 149

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMIASYHD 248
           A+   Y L     +A   L   +K+        ++  +  L+ ++   A++GD+  +   
Sbjct: 150 ALAIAYQLEGSLEQAENILTTYEKSMTNVPLKTDQEHSEALLYKNTIIAERGDIQRALEH 209

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV----NP-HPEIANIYTHLL 303
                K C + +      A+ L   N+K +A       W+     NP HPE        L
Sbjct: 210 LDSDCKNCLDRLAVMEMRARYLSQLNRKEEAAK----AWRALLDRNPEHPEYYEGLIEAL 265

Query: 304 SENTVG 309
             +   
Sbjct: 266 EIDEKD 271


>gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
 gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
          Length = 1000

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 30/288 (10%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PAT--REFA 156
            P A + +   + +              Q       Y  A      +L+  P +  RE A
Sbjct: 566 YPEAIRYYRQAAAEGESDY---ALYQIGQAYYNAGNYEEALRTFNRLLEEHPESTWREEA 622

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-------EAVVQQYVLAKEWSRAIT 209
           +Y + +      + + A     + L+++P+ P          +A+     L    +    
Sbjct: 623 LYQIGYIHFLNQEYDQAIAAYRRLLELAPNDPLAAKAQYGIGDALFNAGRLEAAVNAYKR 682

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDM-IASYHDAIESLKLCDNSIMASICAAK 268
            L +  ++    +   +I     +  N  +    I S+  A    ++ D         A+
Sbjct: 683 VLERYPQSPFVADAATSIHFALIAAGNEARAQALIDSFATAYPDTRIVDELR---FRRAE 739

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEI 320
           +L    +  +A   LE   + +  P+        +A +Y      +   +     +L   
Sbjct: 740 ALYRSGRSEEAIRALEAFVRGSHAPDLMGEALYYLATLYAEQELYDEAERT--LQQLLAA 797

Query: 321 NKES---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           + E     E+L+++  + L+    + A         +AP +   L  A
Sbjct: 798 HAEHRRMPEALLLLGNVQLKQERYEAALVSFRRLASMAPERSELLARA 845



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 28/203 (13%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN--ADKGDM 242
           P  P       +  +   +   A   L   +  A  +  +  +     +L     D G  
Sbjct: 64  PRVPEALFYEAEARLALGQTDEAAALL---RVFAARYPTHPLVYEAQLALGKYFFDTGRY 120

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLI-------SQNKKRKAE---VILEKIW---KV 289
             +     ++L+     + A+  AA++L           +  +A      L   +   ++
Sbjct: 121 DDARQAFGQALR--PG-VPAT-QAARALFWMAESAQRLGRPAEAIGYYRRLADTYPNTRL 176

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQA-- 344
            P   +A  YT +         +    L      + E+    + ++++  E+G   +A  
Sbjct: 177 APQALLAMAYTQVEMGAYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELGDYRRAID 236

Query: 345 -HAKAMLAMKIAPRKEIFLLLAQ 366
              + +  +K   +++ +LLLA+
Sbjct: 237 EVQRRLPDLKGEAQQQAWLLLAE 259



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLEMMLQI--PATRE 154
                AR+  +    +     +  + LL + ++A AE + + A      ++         
Sbjct: 857 GRFAEARQALTEAQARFPEDGQPAILLLGQARLAEAEGRPDEAERLYRAVVGRAQDEAGA 916

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            A+Y L     R GD + A    ++   + P  P 
Sbjct: 917 EALYRLGELLLRRGDPHRAIEELSRLPTLFPGYPE 951


>gi|229017501|ref|ZP_04174402.1| hypothetical protein bcere0030_20540 [Bacillus cereus AH1273]
 gi|228743825|gb|EEL93926.1| hypothetical protein bcere0030_20540 [Bacillus cereus AH1273]
          Length = 1400

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 28/213 (13%)

Query: 205  SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---------YHDAIE---- 251
              A+  L  KK          A  +  R +E         S          + A E    
Sbjct: 1098 RDALHTLKVKKAERSMAFMYAAAAITERWIERQQNEQPKKSIFTRAFYRMKNRAKEISMI 1157

Query: 252  ---------SLKLCDNSIMASICAAKSLISQNKKRKAEVIL----EKIWKVNPHPEIANI 298
                     SLKL   + MA+   A    +    ++A  +L    E  W  +   ++ N+
Sbjct: 1158 TTIIDLYEISLKLNPKNSMAARRFAIFYENAAMNKEAIEVLQTSLENKWDYDVAKQLVNL 1217

Query: 299  YTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356
            +     E      L+   ++     +  ++L++ +++ L+ G   +A    +      P 
Sbjct: 1218 FIECEEEGMLRDALELTKQMVRELPDDYDTLLLQAQVFLKAGEERKAEKICLQLTGKTPF 1277

Query: 357  RKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
                FL LA+I Q+     D I     +A+   
Sbjct: 1278 VSRGFLTLAEIYQSQERFEDAIHLLEDAAVDHP 1310


>gi|149922926|ref|ZP_01911347.1| hypothetical protein PPSIR1_27743 [Plesiocystis pacifica SIR-1]
 gi|149816243|gb|EDM75749.1| hypothetical protein PPSIR1_27743 [Plesiocystis pacifica SIR-1]
          Length = 335

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 10/130 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           + + AL +  +  A   LE        +   R   + +L   +   GD++ A     +AL
Sbjct: 3   QARAALEQGDFEGAQRLLEAAATGGANMEDPRLLHLGALL--AWAGGDIDEAVSSFERAL 60

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENA 237
              P  P +     + Y     +  A   L    +       + +R   +LL+A++    
Sbjct: 61  AAKPVEPRLYVDAGELYADMMNFDDAEDVLRTALEREDLELNKEDRAEVLLLLAQTRLAH 120

Query: 238 DKGDMIASYH 247
              D   +  
Sbjct: 121 LDADPEEALE 130


>gi|154345658|ref|XP_001568766.1| N-acetyltransferase subunit Nat1 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066108|emb|CAM43897.1| putative N-acetyltransferase subunit Nat1 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 711

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%)

Query: 157 VYSLYFESCRI---GDLNSAQRYATKAL-------DISP-DAPWVTEAVVQQYVLAKEWS 205
           + SLY ++ R    GD  +      +A        + SP    WV   +   Y    +++
Sbjct: 337 LKSLYVDAERAAKMGDFFATLEQELEAKDFSRFGGEASPCYILWVRTFLASHYRRTGDYA 396

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A  ++ +   +         +L + ++   A +G    +   A  + +L       +  
Sbjct: 397 LAHAYIEKAIAHTPTLE----LLYLEKAKILAREGKTAEAAEQADMARRLDLQDKYLNSK 452

Query: 266 AAKSLISQNKKRKAEV 281
           AAK     N+  K E 
Sbjct: 453 AAKYYFRDNQVEKGEA 468


>gi|94969691|ref|YP_591739.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551741|gb|ABF41665.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 537

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 46/187 (24%)

Query: 176 YATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           Y+ +A + + D     +A+V          A+ W           + A E+++N   +L 
Sbjct: 372 YSAEADNDARDKGLAWQAIVNSGMTDAQPEAERW----------LRKASEYDKNDPAVLS 421

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A +  +  +GD   +      +L L  + + A    A         R+A  + E  ++  
Sbjct: 422 ALAFLSQKRGDTETARALYTSALSLNPSELDAENNLAILEARAGHTRRAVELWEDAFRRA 481

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           P                                     + ++      G  D A      
Sbjct: 482 P-------------------------------GHSGIGMNLALAFCSTGQYDAARQFTTR 510

Query: 351 AMKIAPR 357
            ++  P 
Sbjct: 511 VLEFNPD 517



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 13/153 (8%)

Query: 81  YDKG--YKALYTGLMSIAAH--NI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
            DKG  ++A+      + +   +  P A +     S+        L  L    ++     
Sbjct: 381 RDKGLAWQAI------VNSGMTDAQPEAERWLRKASEYDKNDPAVLSAL--AFLSQKRGD 432

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
              A       L +  +   A  +L     R G    A      A   +P    +   + 
Sbjct: 433 TETARALYTSALSLNPSELDAENNLAILEARAGHTRRAVELWEDAFRRAPGHSGIGMNLA 492

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
             +    ++  A  F  +  +   +    R +L
Sbjct: 493 LAFCSTGQYDAARQFTTRVLEFNPDLPAARHLL 525


>gi|56551981|ref|YP_162820.1| cellulose synthase operon C domain-containing protein [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|56543555|gb|AAV89709.1| cellulose synthase operon C domain protein [Zymomonas mobilis
           subsp. mobilis ZM4]
          Length = 1336

 Score = 39.9 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 36/98 (36%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +I       + A      ML+       A+ +    + + G+ + A++   +   ++P 
Sbjct: 554 ARIYQDAGLTDKAQSLYHYMLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPG 613

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            P+V  A  +      +  +A+  L +  +  +   R 
Sbjct: 614 NPYVYLASARFEKSKSDDEQALKDLKKAHRVYQRMVRQ 651



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 28/249 (11%)

Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIP--ATREFAVY--SLYFESCRIGDLNSAQR 175
           + +   +        +   A   L  +   P  +  +  +    L     ++GD+  A  
Sbjct: 402 INIALARAKRMSLYGRRGDAIGLLRSLANDPNRSISQLGMIADGL----LQLGDVEDAAF 457

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-----NQKKKNAKEWNRNRAILLI 230
            A  +L +        +A +   +    +  A  F+        + +   +      L I
Sbjct: 458 LAEHSLSLPLGEANDYQASLSVLIRTGHYDTASDFISQIASEMSRHDQNGYKMLNRTLAI 517

Query: 231 ARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           AR+     K   + +    H A E     DN +      A+         KA+ +    +
Sbjct: 518 ARADMMRQKKLYMPAFDVLHQAWEETGGGDNILP---VLARIYQDAGLTDKAQSL--YHY 572

Query: 288 KVNPHPEIANIYTH----LLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSID 342
            +  HP  A+   +       +    + ++A  RL+++   +    +  ++        +
Sbjct: 573 MLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPGNPYVYLASARFEKSKSDDE 632

Query: 343 QAHAKAMLA 351
           QA      A
Sbjct: 633 QALKDLKKA 641


>gi|311267211|ref|XP_003131457.1| PREDICTED: dnaJ homolog subfamily C member 7-like [Sus scrofa]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTHAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|254524873|ref|ZP_05136928.1| type IV pilus biogenesis/stability protein PilW [Stenotrophomonas
           sp. SKA14]
 gi|219722464|gb|EED40989.1| type IV pilus biogenesis/stability protein PilW [Stenotrophomonas
           sp. SKA14]
          Length = 261

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 8/146 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+A +  +   G++ A+   A E+ KL   +  A +  A     + +  +A     +  +
Sbjct: 56  LLALAARDMQVGNLDAAERKAREAQKLAPEAPDALVLLAGIDERRGRTPQAGESFRRAAE 115

Query: 289 VNPHP-EI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           + P   +I     A +        ++    RAL+         E+       AL+ G  +
Sbjct: 116 LAPQRGDILNNYGAWLCQQGRPAESLVWFDRALQAPGYAT-PAEAQANAGGCALDAGQFE 174

Query: 343 QAHAKAMLAMKIAPRKEIFL-LLAQI 367
           +A      A+   P   + L  +AQ+
Sbjct: 175 RAERDLRAALTTLPDNPVALEAMAQL 200


>gi|281356693|ref|ZP_06243184.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548]
 gi|281316820|gb|EFB00843.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548]
          Length = 837

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 87/277 (31%), Gaps = 26/277 (9%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPAT---REFAVYSLYFE--SCRIGDLNSAQRYATKA 180
               A A  +  +A      +++   T   R    Y L+ E          +A    T A
Sbjct: 364 AAVTAQAAGRPEVARRMYRYLIEQAETPDQRLEGNY-LFGEYSFREKNFRQAANLLKTVA 422

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              S  A      ++Q  V  K +  A       +++      +       R+L     G
Sbjct: 423 DSGSNRADAARYRLLQSLVELKRYKEAEPVAEALRRS--PVQTHATSADFYRALLLEKAG 480

Query: 241 DMIASYHDAIESLKLCDNS--IMASIC-AAKSLISQNKKRKAEVILEKIWKVNPHPEI-- 295
               +  + ++ L    +S     ++  AA+  +   +   A     +  + NP  +   
Sbjct: 481 HSAEARSEYLKFLVAHPDSEYSPRALFSAAELAMELREYPAAVREFFEFAEKNPKSDSAP 540

Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAHAKA 348
           A +Y  + S     N     +    LE+   ES    ES + ++   +     D A A+ 
Sbjct: 541 AALYQAMQSGYFARNAAETRRAIELLEKKYPESPVVIESRLQLADYLIRDADYDGALAQL 600

Query: 349 M-----LAMKIAPRKEIFLL-LAQIEQANSHNTDKIL 379
                  A K        L   A+I +    + D + 
Sbjct: 601 AEVEKYPAAKSPETASELLYDHARIARLQRQDEDALK 637


>gi|149066132|gb|EDM16005.1| rCG59523, isoform CRA_c [Rattus norvegicus]
          Length = 4687

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1602

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1603 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1662

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1663 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1700


>gi|148668310|gb|EDL00640.1| transmembrane and tetratricopeptide repeat containing 4, isoform
           CRA_d [Mus musculus]
          Length = 798

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 516 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 571

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 572 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 624


>gi|40849888|gb|AAR95656.1| plectin 2 [Rattus norvegicus]
          Length = 4536

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1392 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1451

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1452 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1511

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1512 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1549


>gi|77359077|ref|YP_338652.1| heme biosynthesis protein [Pseudoalteromonas haloplanktis TAC125]
 gi|76873988|emb|CAI85209.1| putative HemY (Uncharacterized enzyme of heme biosynthesis); by
          synteny may be involved in heme biosynthesis or
          transport [Pseudoalteromonas haloplanktis TAC125]
          Length = 368

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%)

Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80
          +      V I++ N     +      +    L    L + + R+  S      H    R+
Sbjct: 21 LLDEKGYVLISFNNTTIEGTIVSFAVLTIAVLVVSYLTYKLVRYLFSIYRNTKHSFFARS 80

Query: 81 YDKGYKALYTGLMSI 95
            +   A+   L S+
Sbjct: 81 QGRKQAAIEQALWSV 95


>gi|299746718|ref|XP_001840503.2| hypothetical protein CC1G_07233 [Coprinopsis cinerea okayama7#130]
 gi|298407187|gb|EAU81303.2| hypothetical protein CC1G_07233 [Coprinopsis cinerea okayama7#130]
          Length = 889

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 38/147 (25%), Gaps = 30/147 (20%)

Query: 167 IGDLNSAQRYATKALDISPD-----------APWVTEAVVQQYVLAKEWSRAITFLNQK- 214
            G    A +   KAL + P              +  +A         + +RA+    Q  
Sbjct: 307 EGAHEEATQLVQKALALKPSPHTERFYPLRTMAYAYQARYNHLRDPNDLARALDAFQQAC 366

Query: 215 -KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS---------- 263
                    R R  L  A      ++     +      ++ L    I  S          
Sbjct: 367 TYPTGVTLERFRTTLAWAAFALEKNRDQHHWALTAYRHAVSLLPRLIPFSKNMASRRNIL 426

Query: 264 -------ICAAKSLISQNKKRKAEVIL 283
                    AA+  I   +  +A  +L
Sbjct: 427 LHSRGLGATAARVAIELGELEEAVTLL 453


>gi|256221751|ref|NP_001157776.1| plectin isoform 1b [Rattus norvegicus]
          Length = 4544

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1459

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1460 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1519

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1520 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1557


>gi|256221662|ref|NP_001157769.1| plectin isoform 1f [Rattus norvegicus]
          Length = 4535

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1391 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1450

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1451 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1510

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1511 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1548


>gi|167645614|ref|YP_001683277.1| TPR repeat-containing protein [Caulobacter sp. K31]
 gi|167348044|gb|ABZ70779.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter sp. K31]
          Length = 460

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 9/165 (5%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +ARS    ++GD  A+     E+LKL  +  +A +  A  L    +   A   ++ +   
Sbjct: 46  LARSYVEQERGDNRAARASLDEALKLQPDFPLARLTRAMVLSDLKETDAAIADIDALGAF 105

Query: 290 NPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            P  +I  +   +          +     L  +  +S ++   +        +  +  A 
Sbjct: 106 TPPDQILRMKIDIFRTGGRYREAIDAGKALVALKPDSADAYRRLGHARQASENEAEGKAA 165

Query: 348 AML---AMKIAPRK-EIFLLLAQIEQANSHNTDKIL---YWTQSA 385
                 A+K+ P   +++ L  +I  A             W   A
Sbjct: 166 LADYDKALKLDPDMLKVYALRGEILSARRDVKGVERNYQAWLAKA 210


>gi|40849900|gb|AAR95662.1| plectin 8 [Rattus norvegicus]
          Length = 4545

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1401 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1460

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1461 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1520

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1521 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1558


>gi|40849906|gb|AAR95665.1| plectin 11 [Rattus norvegicus]
          Length = 4545

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1401 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1460

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1461 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1520

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1521 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1558


>gi|262206280|ref|NP_003306.3| dnaJ homolog subfamily C member 7 isoform 1 [Homo sapiens]
 gi|46397879|sp|Q99615|DNJC7_HUMAN RecName: Full=DnaJ homolog subfamily C member 7; AltName:
           Full=Tetratricopeptide repeat protein 2; Short=TPR
           repeat protein 2
 gi|40225850|gb|AAH11837.2| DNAJC7 protein [Homo sapiens]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|256221767|ref|NP_001157780.1| plectin isoform 1a [Rattus norvegicus]
          Length = 4544

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1459

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1460 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1519

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1520 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1557


>gi|256221749|ref|NP_001157775.1| plectin isoform 1d [Rattus norvegicus]
          Length = 4512

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1368 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1427

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1428 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1487

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1488 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1525


>gi|256221664|ref|NP_001157770.1| plectin isoform 1e [Rattus norvegicus]
          Length = 4522

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1378 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1437

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1438 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1497

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1498 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1535


>gi|225470942|ref|XP_002264247.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297745492|emb|CBI40572.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 52/206 (25%)

Query: 228 LLIARSLENADKGD-MIASYHDAIESLKL---------CDNSIMASICAAKSLISQNKKR 277
            L+  + +    GD    +   AI + +            +  M     A    S  +  
Sbjct: 85  FLLKMARDTIASGDSPSKALDFAIRAARSFESCSGSEPSLDLAMCLHVVAAIHCSLGRFE 144

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLL-----------SENTVGKLKRA------------ 314
           +A  +LE+  +V   P++A    H L           S + +G+L R+            
Sbjct: 145 EAVPVLERAIRV---PDLAKGSDHALAMFSGYMQLGDSHSMLGQLDRSVSAYESGLKIQT 201

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQA-----------HAKAMLA-MKIAPRKEIFL 362
             L E +    E+   ++++ ++    D+A              +  A ++ A  +    
Sbjct: 202 ETLGESDPRVAETCRYLAEVHVQALQFDEAENLCKKTLEIHREHSEPASLEEAADRR--- 258

Query: 363 LLAQIEQANSHNTDKILYWTQSALHA 388
           L+A I +A   + +  L     A  A
Sbjct: 259 LMALICEAKR-DYEAALEHLVLASMA 283


>gi|115359734|ref|YP_776872.1| serine/threonine protein kinase [Burkholderia ambifaria AMMD]
 gi|115285022|gb|ABI90538.1| serine/threonine protein kinase [Burkholderia ambifaria AMMD]
          Length = 1348

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 6/162 (3%)

Query: 101  PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAV 157
             +AR+     +         +  L   +        + A      +L++      R    
Sbjct: 1163 AMAREAVYCATCLDHLPTLGVTMLYLARTYQLAGDRDAARSLSVALLRLSEAHRLRAVGH 1222

Query: 158  YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y+    +    D      +  A +         +    + +      ++  A+  + Q  
Sbjct: 1223 YAAIIHAWTQEDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAARGDYGAALAQIRQCL 1282

Query: 216  K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                    R     L+ +  E   + D       A+++ +  
Sbjct: 1283 AWCESTGERYYEAQLLLKECEYLRRADPRCGGVAALDACRRA 1324


>gi|40849890|gb|AAR95657.1| plectin 3 [Rattus norvegicus]
          Length = 4523

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1379 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1438

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1439 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1498

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1499 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1536


>gi|40849886|gb|AAR95655.1| plectin 1 [Rattus norvegicus]
          Length = 4574

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1430 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1489

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1490 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1549

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1550 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1587


>gi|40849898|gb|AAR95661.1| plectin 7 [Rattus norvegicus]
          Length = 4513

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1369 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1428

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1429 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1488

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1489 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1526


>gi|53718164|ref|YP_107150.1| hypothetical protein BPSL0525 [Burkholderia pseudomallei K96243]
 gi|53724081|ref|YP_104601.1| TPR domain-containing protein [Burkholderia mallei ATCC 23344]
 gi|76810361|ref|YP_332170.1| hypothetical protein BURPS1710b_0757 [Burkholderia pseudomallei
           1710b]
 gi|121600080|ref|YP_991436.1| TPR domain-containing protein [Burkholderia mallei SAVP1]
 gi|124385353|ref|YP_001027488.1| TPR domain-containing protein [Burkholderia mallei NCTC 10229]
 gi|126439979|ref|YP_001057625.1| TPR repeat-containing protein [Burkholderia pseudomallei 668]
 gi|126448388|ref|YP_001082454.1| TPR domain-containing protein [Burkholderia mallei NCTC 10247]
 gi|126452823|ref|YP_001064871.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a]
 gi|134279447|ref|ZP_01766159.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
 gi|237810775|ref|YP_002895226.1| TPR domain protein [Burkholderia pseudomallei MSHR346]
 gi|238561327|ref|ZP_00442181.2| TPR domain protein [Burkholderia mallei GB8 horse 4]
 gi|242314624|ref|ZP_04813640.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
 gi|251767334|ref|ZP_04820068.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
 gi|254174735|ref|ZP_04881396.1| TPR domain protein [Burkholderia mallei ATCC 10399]
 gi|254181863|ref|ZP_04888460.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
 gi|254207022|ref|ZP_04913373.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
 gi|254258660|ref|ZP_04949714.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
 gi|254357501|ref|ZP_04973775.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
 gi|52208578|emb|CAH34514.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|52427504|gb|AAU48097.1| TPR domain protein [Burkholderia mallei ATCC 23344]
 gi|76579814|gb|ABA49289.1| putative membrane protein [Burkholderia pseudomallei 1710b]
 gi|121228890|gb|ABM51408.1| TPR domain protein [Burkholderia mallei SAVP1]
 gi|124293373|gb|ABN02642.1| TPR domain protein [Burkholderia mallei NCTC 10229]
 gi|126219472|gb|ABN82978.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668]
 gi|126226465|gb|ABN90005.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
 gi|126241258|gb|ABO04351.1| TPR domain protein [Burkholderia mallei NCTC 10247]
 gi|134248647|gb|EBA48729.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
 gi|147752564|gb|EDK59630.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
 gi|148026565|gb|EDK84650.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
 gi|160695780|gb|EDP85750.1| TPR domain protein [Burkholderia mallei ATCC 10399]
 gi|184212401|gb|EDU09444.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
 gi|237504659|gb|ACQ96977.1| TPR domain protein [Burkholderia pseudomallei MSHR346]
 gi|238524787|gb|EEP88218.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
 gi|242137863|gb|EES24265.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
 gi|243063113|gb|EES45299.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
 gi|254217349|gb|EET06733.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
          Length = 606

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 51  DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 110

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP +    +      VL  + + A   L
Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 167

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
           +Q+   A   NR +AI+ +                                A + +    
Sbjct: 168 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 227

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L++  + + A++     L       +A  I      V  +P+     
Sbjct: 228 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 283

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 284 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 343

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           A +K      + ++ LAQI   + +N      W      A 
Sbjct: 344 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 383


>gi|16330359|ref|NP_441087.1| hypothetical protein sll1628 [Synechocystis sp. PCC 6803]
 gi|1652849|dbj|BAA17767.1| sll1628 [Synechocystis sp. PCC 6803]
          Length = 384

 Score = 39.9 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 134 RQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            +   A     E + Q P   E  +   L  E+        A     KAL + P  P   
Sbjct: 314 GKLEEALANFDEALAQNPDDAEVWLSRGLLLEAMERK--EEAIPSYEKALTLEPTLPEAQ 371

Query: 192 EAVVQQY 198
           E + +  
Sbjct: 372 ERLEELQ 378


>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 747

 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 85/281 (30%), Gaps = 29/281 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER--QYNIAHEKLEMML 147
            GL          A +  +   Q     +  LV  L  +     R  Q   A +  +  +
Sbjct: 381 RGLTQALNGQHREALQSFTRALQL----DPDLVTSLNGKGVALNRLRQNRDALQSFDRAI 436

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWS 205
            +      A          +G    A      AL   P     W  ++++ + +    + 
Sbjct: 437 LLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSLILRQMRK--YE 494

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+    Q       +  N A+   ++ L   + G +  +Y    E+LK       A   
Sbjct: 495 EALQASEQALS----YEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYG 550

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---------ENTVGKLKRALR 316
               L +Q K + A    ++  + +P+      Y  +            N    L+   R
Sbjct: 551 MGNVLYAQQKFKSALDNYDRALQFDPN------YVKVWERRGQLLQELGNYRRSLESFER 604

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +I+     + +  + +   M   D A      A++  P 
Sbjct: 605 ATQIDPSFAPAWLGKATVLSRMERYDMALNAYEEALRRNPS 645



 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 50/158 (31%), Gaps = 4/158 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A++  +  L+  +    A+Y +           SA     +AL   P+   V E 
Sbjct: 525 GRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWER 584

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             Q       + R++    +  +    +    A   + ++   +       + +   E+L
Sbjct: 585 RGQLLQELGNYRRSLESFERATQIDPSF----APAWLGKATVLSRMERYDMALNAYEEAL 640

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +   +   A      +L        A    +   KVNP
Sbjct: 641 RRNPSLPAALNGKGNALYRLGNYSAALSAYDNALKVNP 678


>gi|256221612|ref|NP_001157768.1| plectin isoform 1c [Rattus norvegicus]
          Length = 4573

 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1488

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1489 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1548

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1549 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1586


>gi|256390102|ref|YP_003111666.1| hypothetical protein Caci_0892 [Catenulispora acidiphila DSM 44928]
 gi|256356328|gb|ACU69825.1| Tetratricopeptide TPR_4 [Catenulispora acidiphila DSM 44928]
          Length = 667

 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 49/157 (31%), Gaps = 40/157 (25%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A + + A    +Q    A+    +R + ++  S +         +    + + +L     
Sbjct: 500 AGDLAGAREAWDQSMAQAETAWAHRNLAILDASEDRLGD-----AADRYLRAWQLSPRLR 554

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320
             +I   ++LI+  +  +A  I+                          +LK        
Sbjct: 555 PLTIETLRALITAKRPGEALDII-------------------------DRLK-------- 581

Query: 321 NKESVESLVIVSK--IALEMGSIDQAHAKAMLAMKIA 355
             +     +++ +   AL+ G + +A       + + 
Sbjct: 582 EPDRFAGRILMLECRAALDAGDLVRARRILETGLIVE 618


>gi|209542487|ref|YP_002274716.1| tetratricopeptide repeat-containing protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530164|gb|ACI50101.1| Tetratricopeptide TPR_2 repeat protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 646

 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 29/204 (14%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSI 260
             W+ A   L   +            LL+  +      GD  A+  + +  + +   +  
Sbjct: 127 GRWAEAEASLRAARALCP----GDMALLLEWARACIHGGDHAAATAEIVAGADRFAPDHA 182

Query: 261 MASICAAKSLISQNKKRKAEVILE----------KIWKVNPHPEIANIYTHLLSENTVGK 310
            A    A  L  + +   AE +              W  +     A ++     E+    
Sbjct: 183 GALHGLATLLADRGQPAGAEALYRQIVRLLPDDGAAWANHG----AALFALNRHEDARVA 238

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI-E 368
           L+ A  L        E+   +  + + +G + QA      A  +AP    I +  A I +
Sbjct: 239 LEHAAALA---PGVAETQNNLGLVLMALGHLPQARTALERARILAPGDARIAVNAATILD 295

Query: 369 QANSHNTDKILYWTQSALHAMPDP 392
           +    +  + LY    A+  + DP
Sbjct: 296 ELAEGDAAEALY---RAV--LRDP 314


>gi|15679580|ref|NP_276697.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2622708|gb|AAB86058.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 351

 Score = 39.9 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 77/242 (31%), Gaps = 21/242 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
              I     +++ +       L+I     + +  L     R+G  + A     +A+ I P
Sbjct: 104 RADILFDSGKFSKSELCYTAALRIDPNDVYILNRLGDNLTRLGRFDEALENYRRAIMIEP 163

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           + P++   +    + A     A+    +  K   + +     LL  R +     G  + +
Sbjct: 164 ENPYIWNNMAITLLNAGRVDEALEASERALKIKHDPD-----LLYWRGVMLEVAGKPLEA 218

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHPEIANIYTH 301
                 SL++   +          L    +  +A       LE   +    P + N    
Sbjct: 219 LESYERSLEIDPRNAEVWTARGNLLSDLGRMEEAIESYNSALELALEDEQDPNVWN---- 274

Query: 302 LLSENTVGKLKRA-LRLEEIN------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               N + +L+R    LE          E+      +    LE+   D+A      A+ I
Sbjct: 275 -RKGNALLELERFNEALECYRRAIEMEPENDVYWTNMGVALLELERFDEALEAFNRALMI 333

Query: 355 AP 356
            P
Sbjct: 334 NP 335


>gi|322823366|gb|EFZ29135.1| hypothetical protein TCSYLVIO_4628 [Trypanosoma cruzi]
          Length = 646

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 4/102 (3%)

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             A VQ+ +    +  A+  L++        NR   ++L +R+  N   G    +  DA+
Sbjct: 221 QLAAVQKNLSEGAYEEALKLLDK--LPLNAVNRVDILVLRSRA--NIFLGRYEEALKDAL 276

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           E+++     +  ++ AA++     K  KA   + +   + PH
Sbjct: 277 EAIEEEPRWVKGNLAAARAFSGLCKFEKAAQQIHRAMLLLPH 318


>gi|288920314|ref|ZP_06414626.1| hypothetical protein FrEUN1fDRAFT_4324 [Frankia sp. EUN1f]
 gi|288348262|gb|EFC82527.1| hypothetical protein FrEUN1fDRAFT_4324 [Frankia sp. EUN1f]
          Length = 144

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 2/116 (1%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y     G+  +   +   A ++ ++            V     +      Q++ A     
Sbjct: 27  YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALARAQFEAGQFDDAARTFA 84

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            ++    T ++A + L   + R GDL  A  +   A+ + PD      A+      
Sbjct: 85  WIVDRHPTDDYAQFGLGMAARRAGDLRVAIEHLALAVAMRPDLAHYGVALRGARAA 140


>gi|196228940|ref|ZP_03127806.1| cytochrome C family protein [Chthoniobacter flavus Ellin428]
 gi|196227221|gb|EDY21725.1| cytochrome C family protein [Chthoniobacter flavus Ellin428]
          Length = 785

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 11/162 (6%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   A+       K A +W+   A L    ++  +  G    +     E+++L     
Sbjct: 617 RGDEKGALDEF----KLAVDWDHGSAPLRSNYAIALSLSGQSEEAVKQLAEAVRLAPREA 672

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRAL 315
                 A +L   N+  +A   LE+  +++  P+    +         +      L+   
Sbjct: 673 QLRYTYALALNEVNRAAEARTQLEQAVQLD--PQFGRAWYNLGLARNAAGQPDQALEALA 730

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           R E ++ ++ ++    + I L +    +A   A  A+KI P 
Sbjct: 731 RAEALDPQNPQAPYAAATILLRLQRAHEAADAARRALKIEPS 772


>gi|149066131|gb|EDM16004.1| rCG59523, isoform CRA_b [Rattus norvegicus]
          Length = 4573

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1488

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1489 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1548

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1549 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1586


>gi|149066130|gb|EDM16003.1| rCG59523, isoform CRA_a [Rattus norvegicus]
          Length = 4585

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1441 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1500

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1501 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1560

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1561 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1598


>gi|157371846|ref|YP_001479835.1| type IV pilus biogenesis/stability protein PilW [Serratia
           proteamaculans 568]
 gi|157323610|gb|ABV42707.1| type IV pilus biogenesis/stability protein PilW [Serratia
           proteamaculans 568]
          Length = 263

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 64/200 (32%), Gaps = 19/200 (9%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL++  + + P  +   S   Q           L      L +     A + LE   
Sbjct: 24  LAAGLLAGCSGSTPEEKDAQSQAGQ---------TRLQLGLEYLKQGDLPAARQNLEKAA 74

Query: 148 ----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
               Q   T+      +     R+G+ ++A++   +AL ++P+   V            +
Sbjct: 75  DAAPQDYRTQL----GMALYEQRMGENSAAEQRYQQALKLAPNNGTVLNNYGAFLCSLGQ 130

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  A    +             ++            G    +      ++K+  +     
Sbjct: 131 YVPAQQQFSAAAVAPDYGQVADSLENAGYC--FLKAGQNDEARTLLTRAMKIDPDKGTPL 188

Query: 264 ICAAKSLISQNKKRKAEVIL 283
           +  A+    + K+ +++++L
Sbjct: 189 LVEAEKQFGEGKRAQSQLLL 208


>gi|39940178|ref|XP_359626.1| hypothetical protein MGG_05151 [Magnaporthe oryzae 70-15]
 gi|145010592|gb|EDJ95248.1| hypothetical protein MGG_05151 [Magnaporthe oryzae 70-15]
          Length = 837

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 70/231 (30%), Gaps = 39/231 (16%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           ++ ++ A +  +  L++          L     ++ D     +   + L   P       
Sbjct: 92  QKNFDEAIKAYKFALRLEPKSAQIQRDLAILQIQMRDYQGYVQTRMQMLTARPQLRQNWT 151

Query: 193 AVVQQYVLAKEWSRA---ITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASY 246
           AV   + LA   + A   +T   Q  K   +  ++  + AI+   ++   A+ GD   + 
Sbjct: 152 AVAIAHHLAGNLAEAENILTTYEQSLKVPPSRADFEHSEAIM--YKNTIIAESGDTQRAL 209

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               E  K   + +      AK L    KK +A       W+                  
Sbjct: 210 DHLEEISKSVLDRLAVMETRAKYLSELGKKEEATK----AWRA----------------- 248

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                     L + N +  +    +++       +    A      K APR
Sbjct: 249 ----------LLDRNPDHADYYYGLAEAMGISDDVAAKQAIFDEYAKKAPR 289


>gi|91785587|ref|YP_560793.1| TPR repeat-containing protein [Burkholderia xenovorans LB400]
 gi|91689541|gb|ABE32741.1| TPR repeat protein [Burkholderia xenovorans LB400]
          Length = 601

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 15/206 (7%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A+     E+ + G L++A+ +  +AL +              +        A + +++
Sbjct: 20  LTALIDAALEAHQAGRLDAAESFYREALTLDSAHTGALHYFGVLHYQRGAHDIAASLMSR 79

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K     +R+ A     R L  A  G +  +     ++L+L  +   A      +L +Q
Sbjct: 80  ALK----LDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGAALQAQ 135

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVE 326
               +A          NP      +  HL     + KL R    L        ++  S E
Sbjct: 136 GALPEAVEHYRLALASNP----MLLDAHLNLGTALNKLARFDEALACYRHVLSLDPASAE 191

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAM 352
           +           G    A A    A+
Sbjct: 192 AHFSAGNTYQARGDHGAAIASFEQAV 217


>gi|15676598|ref|NP_273742.1| IgA-specific serine endopeptidase [Neisseria meningitidis MC58]
 gi|7225928|gb|AAF41117.1| IgA-specific serine endopeptidase [Neisseria meningitidis MC58]
 gi|325139921|gb|EGC62451.1| IgA-specific serine endopeptidase [Neisseria meningitidis CU385]
          Length = 1815

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1156 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1200

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S  
Sbjct: 1201 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1252

Query: 185  --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                A     A  QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1253 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1311

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1312 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1363

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1364 ---SQPQRRKRRAA 1374



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
             R ++K  +A       ++A     A +    ++ +     E        Q A   R++ 
Sbjct: 1071 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1121

Query: 138  IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190
               E  E+  +        R+ A      +  R     + Q Y   A    P       V
Sbjct: 1122 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1176

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             +  V+        ++A   L ++++      R  A LL  +  E   +   +A+   A 
Sbjct: 1177 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1225

Query: 251  --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              E+ +           AA+    Q  +RKA  +
Sbjct: 1226 AEEAKRQ----------AAELAHRQEAERKAAEL 1249


>gi|87301812|ref|ZP_01084646.1| photosystem I assembly protein Ycf3 [Synechococcus sp. WH 5701]
 gi|87283380|gb|EAQ75335.1| photosystem I assembly protein Ycf3 [Synechococcus sp. WH 5701]
          Length = 173

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 19/125 (15%)

Query: 79  RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALAERQ 135
           R   + +     G+ +    +   A  + +Y        +      +      +  +   
Sbjct: 30  RRAKEAFAYYRDGMSA--QGDGEYAEALENYDEALKLEDDPLDRAFILYNMALVYTSNGD 87

Query: 136 YNIAHEKLEM-------MLQIPATREFAVYSLYFESCRIGDLNS-------AQRYATKAL 181
           +  A E  E        M Q         + L   +   GD +        A  Y TKA+
Sbjct: 88  HQRAIETYEQVLELNSHMPQALNNMAVIHHHLGSLAEERGDTDESDRRFSQAAEYWTKAI 147

Query: 182 DISPD 186
            ++P+
Sbjct: 148 RMAPN 152


>gi|254251383|ref|ZP_04944701.1| hypothetical protein BDAG_00568 [Burkholderia dolosa AUO158]
 gi|124893992|gb|EAY67872.1| hypothetical protein BDAG_00568 [Burkholderia dolosa AUO158]
          Length = 608

 Score = 39.9 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 79/223 (35%), Gaps = 23/223 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A    +    A    +A++   V   +    +  L    KN    + +R     A 
Sbjct: 170 ARELARATGETRGPAILALQALL---VRGPDRVGGLAVLKDMLKN----DMSRPEAQFAI 222

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           + +     D   +      +L++  + + A++     L     + +A  I      V  +
Sbjct: 223 ARQQLAVDDKEGAAQSLKRALQIRPDYLPAALM----LSQMGPEERAAGIASFEKYVQQN 278

Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           P+     +A    +L  +      K+   + +++ +    L+ ++ I ++   +D A A 
Sbjct: 279 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDASAY 338

Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384
               +++  ++      + ++ LAQI      N  +   W   
Sbjct: 339 LKQYVQLGDKQPNLDVGQGYIYLAQI-AIEQGNDAQAAQWLDK 380


>gi|312797352|ref|YP_004030274.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica
           HKI 454]
 gi|312169127|emb|CBW76130.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica
           HKI 454]
          Length = 593

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 19/177 (10%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +   + +   R   I L+A+S         + + + A    +    S  A+   A  
Sbjct: 89  ALARDTMDPRFAQRATEIALLAQS--------PVDALNAAQLWQQYAPQSDRAAQIDASL 140

Query: 270 LISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKE 323
           L+   K  +A+ +LE+       P+      I          N    L     L   + +
Sbjct: 141 LVLAGKPEEAKPLLEQQ-LAKVAPDNRANALIGLQMLLARGPNRTSGLHVLQNLLRHDMD 199

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380
             E+   +++        D A      A+K  P     +LL           D+   
Sbjct: 200 KPEANYAIARQQALAQDRDGARQSLQTALKEKPDFLPAMLLLA----QLGPQDRAQA 252



 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 76/261 (29%), Gaps = 46/261 (17%)

Query: 132 AERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
              +   A   LE  L    P  R  A+  L     R  +  S        L    D P 
Sbjct: 143 LAGKPEEAKPLLEQQLAKVAPDNRANALIGLQMLLARGPNRTSGLHVLQNLLRHDMDKPE 202

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+ +Q  LA++   A   L    K   ++    A+LL+A+          +     A
Sbjct: 203 ANYAIARQQALAQDRDGARQSLQTALKEKPDF--LPAMLLLAQ----------LGPQDRA 250

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309
             + +L               + +N + +   +            +A +Y  L  +    
Sbjct: 251 QATQRLS------------QYVRKNPQAREARM-----------SLAQLY--LAGDRLDD 285

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRK---EIFLL 363
                 RL       +  L+ ++ I ++      A         A +  P     + ++ 
Sbjct: 286 AKVEFARLANDGSHDLLPLMALALIEIQQRHWPSAKQYLQRYVAAAQSQPNADPGQAYIY 345

Query: 364 LAQIEQANSHNTDKILYWTQS 384
           LAQI      +      W   
Sbjct: 346 LAQI-ALEQKDDQAASQWLDK 365


>gi|293401089|ref|ZP_06645234.1| hypothetical protein HMPREF0863_01374 [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291306115|gb|EFE47359.1| hypothetical protein HMPREF0863_01374 [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 502

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 42/196 (21%)

Query: 104 RKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            K     +   + H   + L +L + + A                     T    +++L 
Sbjct: 207 WKEFQIANAYISLHRAKDALEHLKKAEAA-----------------GKDDTS---LHALM 246

Query: 162 FESCRIGD--------LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
            ++ R+ D         + A  Y  KA+    +  W+ + ++      ++W + + FL +
Sbjct: 247 GDAYRLLDDMEHANAHYDRALSYYEKAIHREKEHYWIYQEMIWIAHKQRDWKKKLAFLKR 306

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKS 269
            +K  K+       L+   +   +D GD    Y  A  + + C +     +      A +
Sbjct: 307 AEKEKKD----DMWLMYHFARCYSDLGD----YEHAENACEFCLSHGEQGMDMFDLYAWN 358

Query: 270 LISQNKKRKAEVILEK 285
           L    K+RKA  +L K
Sbjct: 359 LGRDGKERKAIEVLAK 374


>gi|237716077|ref|ZP_04546558.1| tetratricopeptide repeat protein [Bacteroides sp. D1]
 gi|262407689|ref|ZP_06084237.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_1_22]
 gi|229443724|gb|EEO49515.1| tetratricopeptide repeat protein [Bacteroides sp. D1]
 gi|262354497|gb|EEZ03589.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_1_22]
          Length = 676

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189
           + Y+ A E LE +L++    TR + +      S +  D  +A     KAL++    P  W
Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+V+      +++ A    N+        +   A   I R+L    + ++  +  D 
Sbjct: 196 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249

Query: 250 IESLKLCDN 258
             +L +  N
Sbjct: 250 DLALDIDPN 258


>gi|254515302|ref|ZP_05127363.1| TPR domain protein [gamma proteobacterium NOR5-3]
 gi|219677545|gb|EED33910.1| TPR domain protein [gamma proteobacterium NOR5-3]
          Length = 610

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 4/158 (2%)

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L +  +L   ++GD  A     I    L      A +  AK  ++          ++
Sbjct: 218 DVSLRLTHALMAEERGDAAAVRERLIPVFALEPYQQQALVLEAKLNLAAGDDEPLAR-IK 276

Query: 285 KIWKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +  K +P   ++   Y  LL S++     K+   L      + + L  ++ I  E+    
Sbjct: 277 EALKKDPTRTDLRLQYARLLASQDMPAARKQFEILSAEAPHNADLLFSLALINHELKDNI 336

Query: 343 QAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
            A A     + +  R  E +L L QI +      + + 
Sbjct: 337 AAKAYLNQVIALGKRNDEAYLFLGQIARTEGDLDEAVQ 374


>gi|300723720|ref|YP_003713027.1| putative outer membrane protein with transferase domain
           [Xenorhabdus nematophila ATCC 19061]
 gi|189313951|gb|ACD88980.1| HmsH [Xenorhabdus nematophila]
 gi|297630244|emb|CBJ90895.1| putative outer membrane protein with transferase domain
           [Xenorhabdus nematophila ATCC 19061]
          Length = 782

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 10/112 (8%)

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            AV + Y   ++WS+AI            + +  + +     +  AD      + H A  
Sbjct: 53  TAVARAYRNKRQWSQAIQLWRAALA----FEKQNSDIKAGLIMTLADAKQDNEARHLAKN 108

Query: 252 SLKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPH-PEIANIYT 300
            LK   N   A+     + + Q   +   A  IL   ++  PH PEI   Y 
Sbjct: 109 LLKSQPN---AANYRLMAYVDQAAGRMWDAMQILSTAYERFPHNPEITQDYL 157


>gi|40849892|gb|AAR95658.1| plectin 4 [Rattus norvegicus]
 gi|40849894|gb|AAR95659.1| plectin 5 [Rattus norvegicus]
 gi|40849902|gb|AAR95663.1| plectin 9 [Rattus norvegicus]
          Length = 4451

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1307 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1366

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1367 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1426

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1427 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1464


>gi|332847545|ref|XP_003315474.1| PREDICTED: dnaJ homolog subfamily C member 7 isoform 1 [Pan
           troglodytes]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|319410073|emb|CBY90407.1| IgA-specific serine endopeptidase (IgA protease) [Neisseria
            meningitidis WUE 2594]
          Length = 1811

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1152 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1196

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S  
Sbjct: 1197 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1248

Query: 185  --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                A     A  QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1249 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1307

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1308 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1359

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1360 ---SQPQRRKRRAA 1370



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
             R ++K  +A       ++A     A +    ++ +     E        Q A   R++ 
Sbjct: 1067 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1117

Query: 138  IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190
               E  E+  +        R+ A      +  R     + Q Y   A    P       V
Sbjct: 1118 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1172

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             +  V+        ++A   L ++++      R  A LL  +  E   +   +A+   A 
Sbjct: 1173 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1221

Query: 251  --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              E+ +           AA+    Q  +RKA  +
Sbjct: 1222 AEEAKRQ----------AAELAHRQEAERKAAEL 1245


>gi|325109330|ref|YP_004270398.1| hypothetical protein Plabr_2777 [Planctomyces brasiliensis DSM
           5305]
 gi|324969598|gb|ADY60376.1| hypothetical protein Plabr_2777 [Planctomyces brasiliensis DSM
           5305]
          Length = 334

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 46/142 (32%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
             +    N   ++L   ++         A    + ++        A+  L       G  
Sbjct: 82  KTEKDLRNPMQLHLSYARLQEQLGHLTEARTSYQKVISREPKSAEAIIGLGRLDALAGRH 141

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             A++    A+++S  +     A+ +     + ++ AI  L +  +++ +  + R  L +
Sbjct: 142 AEAEQRFRHAVEVSNGSADSLYALGEYMASQERYTEAIVELQKAVRSSPKNLQYRYQLGL 201

Query: 231 ARSLENADKGDMIASYHDAIES 252
             +        +        E+
Sbjct: 202 TMARGGQYDTALSVLSEVVTEA 223


>gi|282163113|ref|YP_003355498.1| hypothetical protein MCP_0443 [Methanocella paludicola SANAE]
 gi|282155427|dbj|BAI60515.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 174

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 14/136 (10%)

Query: 129 IALAERQYNIAHEKLEM-MLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDI 183
             L   + + A E+    + + P   E      +  +Y ++ ++ D   A R   +A+ +
Sbjct: 33  ALLLVGRIDEAIEEYRAALDKDPENAEVHYNLGL--IYRKTMQLDD---AIREYREAIRV 87

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P        +    V+  + S A+    +  +         A L   R     + G++ 
Sbjct: 88  DPGNMKYHNNLAAALVVKGQKSEAVKEYEEALRIEP----KNATLHFNRGFALDEMGELQ 143

Query: 244 ASYHDAIESLKLCDNS 259
            +  +  E+L++    
Sbjct: 144 EAKKEYEEALRIDPGF 159


>gi|271967075|ref|YP_003341271.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
 gi|270510250|gb|ACZ88528.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
          Length = 1103

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 49/177 (27%), Gaps = 14/177 (7%)

Query: 127  VQIALAERQYNIAHEKLE---MMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATK 179
              +A     Y  A         M       P      +  L   +    D  +A+ +  +
Sbjct: 853  ATLAEIAGDYGQAGRLYRDGLRMADDLGLWPEVSFT-LSGLGRMALLSKDYPAAREFHER 911

Query: 180  ALDISPDAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            A  ++ +               L       +       ++  + +R  +      +L  A
Sbjct: 912  ARRLAVEQSDTFGEQFAEIGLGLGARRDGDLDTAEAHLRSVLDLHRRMSHEPCVPALILA 971

Query: 238  DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            + G +     DA  +L L  +     +  A++         A   L     +  HP+
Sbjct: 972  ELGFIAEHRGDARAALDLQLD----GLATARTTGDPRAVALALEGLAGAQTLAGHPD 1024


>gi|258404983|ref|YP_003197725.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
           retbaense DSM 5692]
 gi|257797210|gb|ACV68147.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 563

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 81/238 (34%), Gaps = 13/238 (5%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
             L+ Q  LAE     A + L   L+        +  L     R  +   A+    +A +
Sbjct: 44  LFLKAQALLAEGNAPAAAQALSRALEEDPQPTLYLE-LAETYWRNEERQKAKTILKEATE 102

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             PD       + Q Y+  +    A   L    ++  +    RA L     +      D 
Sbjct: 103 RFPDQFAFVANLAQIYMAGQRPKAAAATLRSYIQDHPDNWTARAKL-GEIQVRIQAFADA 161

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
           + +     E  +  ++         ++       +KA   L+    V+  P++A  +  L
Sbjct: 162 VDTLQTIPEPEREPEHLF----FLGQAQAGLGLLQKASDNLQSA--VDKAPQMAKAWAEL 215

Query: 303 -----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                  ++    +    RL E+  ++ E L+ + ++ LE+ + D+A   A       
Sbjct: 216 GYIRERQKDYPAAITAYTRLSELQPDNQEVLIRLIELHLELNNPDKAQTLAESGPGTE 273



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 75/273 (27%), Gaps = 43/273 (15%)

Query: 70  AMLFHMLHKRNYDKGYKALYT---------------GLMSIAAHNIPLARKMHSYVSQQH 114
             L+    +RN  +  +AL                 G M +       A ++        
Sbjct: 313 EALYWYQKERNPARAIEALRQIPASAPFYNQSLHFLGQMHLERDQPEQAVQVARKGKA-- 370

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS 172
           TF +    +LL       + +   A E +   L+     T       L  E+    D  +
Sbjct: 371 TFPDIPDFWLLHSNALRRQDKPQKALEVINDALEKWPEDTDLLYQKGLLAEALDQSD--T 428

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILL 229
           A     + + + P+       V                L++     KNA E       +L
Sbjct: 429 AMASMEQIISLDPEHADALNFVGYSLAEQGR------ELDRALVLIKNAVELRPENGYIL 482

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
            + +     KG+   ++    E+++L                   K ++A     K    
Sbjct: 483 DSLAWVYYQKGNYAKAWDIIQEAVQLSTEDPTIWEHYGDIAAKLQKTKEARRGYRKA--- 539

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
                       L +E+     K+   L E   
Sbjct: 540 ----------IELGAEDQTSIDKKLQTLPEPAP 562


>gi|182413247|ref|YP_001818313.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177840461|gb|ACB74713.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 413

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 4/116 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+  +A   A +AL I  +            V     + A   ++   ++A      
Sbjct: 114 LARGNAPAALTAAEQALAIDSEHVEAANLRAMALVRLGRKAEATETVDFALQHAPNS--- 170

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            A+    +      + D   +     E+L+L      A     ++L ++N   +A 
Sbjct: 171 -ALSHANQGWTYLHRNDPRRAQEFFREALRLDPTMEFARQGMLEALKARNPVYRAM 225


>gi|115377780|ref|ZP_01464970.1| TPR domain protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310817745|ref|YP_003950103.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115365217|gb|EAU64262.1| TPR domain protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309390817|gb|ADO68276.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 304

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 55/159 (34%), Gaps = 6/159 (3%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            + E   +G    +     E+ +    ++   +  A+    +   R  +  LE+  ++ P
Sbjct: 62  EAAELLLEGAPAEARELVDEADRREPGAVETQLLRARICQVERMDRCVQETLERAARMAP 121

Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               P++        S N    L+   + +    +     +  +++       D+A A  
Sbjct: 122 DDARPDLLRAELSERSGNLPAALEAIAQAQSKQPQDTAVSLRYARLLSVTARHDEAEAIL 181

Query: 349 -MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
             L  +++P    +LL   + +  +    +   +   A+
Sbjct: 182 RGLEPRLSP--RDWLLQMGMLRTRAGQDREARAFFARAV 218


>gi|115388427|ref|XP_001211719.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195803|gb|EAU37503.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1573

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 12/132 (9%)

Query: 177 ATKALDISPDA------PWVTEAVVQQYVLAK--EWSRAITFLNQKKKNAKEWNRNRAIL 228
           ATKAL++           W+   ++   +     ++ +A+ + ++    A++     AI 
Sbjct: 513 ATKALEMLSHLCMESNWEWIDGLLLGGCLAYGLGDYQKAMRWYSR--IIARDATHVEAIS 570

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            +A +L   D+     + H  + ++KL  +   A       L S ++ ++A  I+E +  
Sbjct: 571 NLAATLLALDR--REEALHHWLRAVKLRPSFFEAVEHLIGLLCSSHRGKEAVNIIEFVQT 628

Query: 289 VNPHPEIANIYT 300
              HP+  + + 
Sbjct: 629 SLRHPKNGDCFA 640



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 33/112 (29%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A      ++   AT   A+ +L      +     A  +  +A+ + P      E 
Sbjct: 546 GDYQKAMRWYSRIIARDATHVEAISNLAATLLALDRREEALHHWLRAVKLRPSFFEAVEH 605

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++     +     A+  +   + + +             + E     +  +S
Sbjct: 606 LIGLLCSSHRGKEAVNIIEFVQTSLRHPKNGDCFASDEHASEPESDAESRSS 657


>gi|78357018|ref|YP_388467.1| hypothetical protein Dde_1975 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219423|gb|ABB38772.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 379

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 2/190 (1%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  +A    ++A+   PD+  +  A+   Y    +  RA+   +         +R +A +
Sbjct: 39  DRRAAISALSRAVRNDPDSVEIYLALGNLYRAQGDIERAVQLRSTLIARPSLEDRLKARV 98

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                 +    G +  +     ++ +L   S   +   A+         +A  +  ++  
Sbjct: 99  YFELGHDYKRGGFIDRALQAFEQARRLSGESDEITRDTARLHAESGNFLQAATLFGRLGM 158

Query: 289 VNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
             P  H  + +    + S       K   +  + N+ S+E+   +  +A           
Sbjct: 159 RIPQAHYLVRHAQEVMQSHGEAEARKFLSKALKANQSSIEARQELIGLAARNEDWRATRK 218

Query: 347 KAMLAMKIAP 356
           +   A+K  P
Sbjct: 219 RLDEALKTVP 228



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 10/158 (6%)

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEI 295
           + D  A+      +++   +S+   +       +Q    +A   L       P       
Sbjct: 37  ERDRRAAISALSRAVRNDPDSVEIYLALGNLYRAQGDIERAVQ-LRSTLIARPSLEDRLK 95

Query: 296 ANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           A +Y  L             L+   +   ++ ES E     +++  E G+  QA      
Sbjct: 96  ARVYFELGHDYKRGGFIDRALQAFEQARRLSGESDEITRDTARLHAESGNFLQAATLFGR 155

Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                P+   +L+    E   SH   +   +   AL A
Sbjct: 156 LGMRIPQAH-YLVRHAQEVMQSHGEAEARKFLSKALKA 192


>gi|18312740|ref|NP_559407.1| aminopeptidase [Pyrobaculum aerophilum str. IM2]
 gi|18160220|gb|AAL63589.1| aminopeptidase [Pyrobaculum aerophilum str. IM2]
          Length = 822

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 50/125 (40%), Gaps = 7/125 (5%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +++E   K     + +   +++   D     +  AA++L       +A   L + +K + 
Sbjct: 553 QAIEVLKKNGSPRAVNALAKAVG--DKFWGVAAEAARALGEIG-TEEAMAKLTEAFKKSL 609

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG--SIDQAHAKAM 349
           HP +  +    L      + +    L++I  ++ ES  + ++ A  +G    + A     
Sbjct: 610 HPRVRRVIVEALGNT--KRKEAGEFLDKILHDAGESYYVRAEAARALGKVKWEFAEFSLK 667

Query: 350 LAMKI 354
            A++ 
Sbjct: 668 KALEY 672


>gi|116751454|ref|YP_848141.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116700518|gb|ABK19706.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 226

 Score = 39.9 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            LY    R GD   A     KA+++ P+ P     V    +   ++ RAI    +  +  
Sbjct: 84  GLY---LRKGDHAQALAENLKAVELDPNLPMAHNNVAFARLQEGDYERAIESSRRAVELM 140

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
               +    L    ++     GD+ +S   +++ LK+ +    A    A +   +    +
Sbjct: 141 PGLIQAHNTL----AVALIQAGDLDSSIAVSLDMLKMNERFGPAHYNLAVAYKVKGDLER 196

Query: 279 A 279
           A
Sbjct: 197 A 197


>gi|331085214|ref|ZP_08334300.1| hypothetical protein HMPREF0987_00603 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407997|gb|EGG87487.1| hypothetical protein HMPREF0987_00603 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 837

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 52/173 (30%), Gaps = 20/173 (11%)

Query: 103 ARKMHSYVSQQHTFHN-EYLVYLLEVQIAL-AERQYNIAHEKLEMM-------LQIPATR 153
           AR+    + +     + E+   L+    AL A  QY  A E            L     R
Sbjct: 71  AREALEQIRKLGMSESAEHGTTLVNAATALRAAGQYEAALEAYREAEQIYSICLPSEDAR 130

Query: 154 EFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEA-------VVQQYVLAKEWS 205
              +Y+    +  R      A     KAL +        E        + + Y+   + S
Sbjct: 131 FAGLYNNMSLAYERQNAHEEALSCLQKALSVILQTADAKEETAATYTNLAELYLKTGQIS 190

Query: 206 RAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             +  L +     +     + + A  L A        G    +     ++L++
Sbjct: 191 EGLNCLEKALVLYEAGNTQDPHYAAALSACGHGYYLAGRYEEAIDSYTKALRM 243


>gi|315919125|ref|ZP_07915365.1| tetratricopeptide repeat family protein [Bacteroides sp. D2]
 gi|313693000|gb|EFS29835.1| tetratricopeptide repeat family protein [Bacteroides sp. D2]
          Length = 676

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189
           + YN A E LE +L++    TR + +      S +  D  +A     KAL++    P  W
Sbjct: 138 KDYNAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+V+      +++ A    N+        +   A   I R+L    + ++  +  D 
Sbjct: 196 AARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249

Query: 250 IESLKLCDN 258
             +L +  N
Sbjct: 250 DLALDIDPN 258


>gi|297260399|ref|XP_002808010.1| PREDICTED: LOW QUALITY PROTEIN: crooked neck-like protein 1-like
           [Macaca mulatta]
          Length = 848

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 660 RAIYELAI 667


>gi|224537517|ref|ZP_03678056.1| hypothetical protein BACCELL_02396 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520830|gb|EEF89935.1| hypothetical protein BACCELL_02396 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 540

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A      + A    +    I    E  + +L   +   GD  +A+ Y +KA      A  
Sbjct: 374 AYQSGNLDKAESYFKKAASIKDAPEVNM-NLGLIALTKGDKAAAETYLSKAS----GAKE 428

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILLI 230
           + EA+   Y+   ++ RA++             +  AK++N+ +  L  
Sbjct: 429 LNEALGNLYIAQGQYDRAVSAFGNTKSNSAALAQILAKDYNKAKNTLAS 477


>gi|209520241|ref|ZP_03269010.1| TPR repeat-containing protein [Burkholderia sp. H160]
 gi|209499316|gb|EDZ99402.1| TPR repeat-containing protein [Burkholderia sp. H160]
          Length = 579

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 121 LVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L +LL +            A E    +L++      A+  L   + + G L        K
Sbjct: 11  LDHLLRQAVALQQHGALVEAEELYREILELKPKHVDALRWLGELALQTGRLQEGAELLKK 70

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L ++P  P V   +       +    A+    +      ++    A+     +L   ++
Sbjct: 71  TLALNPKQPAVHSNLAYALNALQRHDEALACAERALAMQPKF--ADALNNRGNALAALNR 128

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                +      +L L      A    A  L    +   A
Sbjct: 129 LP--DALASYERALSLAPEFAAAWNNRACVLRDLGRHADA 166


>gi|167737036|ref|ZP_02409810.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 14]
 gi|167822669|ref|ZP_02454140.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 9]
 gi|167917494|ref|ZP_02504585.1| tetratricopeptide repeat protein [Burkholderia pseudomallei BCC215]
          Length = 602

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 47  DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 106

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP +    +      VL  + + A   L
Sbjct: 107 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 163

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
           +Q+   A   NR +AI+ +                                A + +    
Sbjct: 164 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 223

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L++  + + A++     L       +A  I      V  +P+     
Sbjct: 224 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 279

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 280 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 339

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           A +K      + ++ LAQI   + +N      W      A 
Sbjct: 340 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 379


>gi|26349761|dbj|BAC38520.1| unnamed protein product [Mus musculus]
          Length = 621

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 339 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 394

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 395 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 447


>gi|116623140|ref|YP_825296.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226302|gb|ABJ85011.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 311

 Score = 39.9 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 54/171 (31%), Gaps = 16/171 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--- 221
               D+ SA++    A++++P        +       + ++ A     +  K        
Sbjct: 137 LEKRDVESAEKRLEHAVELAPQFENAWNTLGTIAYQTRRFTLAEQRFREALKQDPTAYEP 196

Query: 222 -NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                 +L+    L+ A + ++ A+     ++L        A      +     +   A 
Sbjct: 197 LVNLGGVLVTLHKLDEALEVNVHAALTRPGDAL--------AESQLGMTYFELGQFDNAV 248

Query: 281 VILEKIWKVNP----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
             LE+  K++P    HP++     HL                  + +  ++
Sbjct: 249 KHLERARKLDPAHFSHPQLYLAEIHLRRGEKAAAADVLEDFLLHHPDYPQA 299


>gi|324509190|gb|ADY43867.1| Anaphase-promoting complex subunit 7 [Ascaris suum]
          Length = 526

 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 4/116 (3%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKKNAKEWNRNRAILL 229
           + A ++   AL  +P+   + E +VQ Y++  +   A     N + +  K+  R   +  
Sbjct: 335 DDAIQHVRDALVFTPNDFDLYETLVQAYLMQNKLQEARLAACNCRHQLGKDNARALYLCA 394

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
              +    D   +  +     +++ L  + + A    A+     +   KA  +L+K
Sbjct: 395 TVSAK---DDSTIKDAQKLLEKAISLSPHLLDAVFLLAELYDRTHNYEKAITLLKK 447


>gi|325106907|ref|YP_004267975.1| RNA polymerase subunit alpha domain protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324967175|gb|ADY57953.1| RNA polymerase alpha subunit domain protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 436

 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 33/98 (33%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL+        + + A   L  + +  ATR    Y +       GD   A  Y  +A+D+
Sbjct: 121 LLKAGCIRLAGRVDEAENMLRGLAREAATRAEYSYQMGCIMADRGDTYGALEYFERAVDM 180

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +P+      ++ Q          +I    Q       +
Sbjct: 181 NPNHSRALFSLAQLNNQLGNDDESIRLYEQMLAKPPVY 218


>gi|197120102|ref|YP_002140529.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197089462|gb|ACH40733.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 1106

 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 17/199 (8%)

Query: 167 IGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            GDL+ A     +AL + P            + +       + A+  L +  + + EW+R
Sbjct: 20  AGDLSGASECYRRALQLDPGYAEACFNLGCTLDRLSGP---AEALPHLARAVELSPEWSR 76

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            R  L  A +      G M  +  +   +++L       S     +L + ++  +A+   
Sbjct: 77  ARGSLGFALARL----GRMGEAASELAAAVRLDPGDPGLSNNLGLALSALSRGEEAKDAF 132

Query: 284 EKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
           E+  +       PH  ++ ++       +   +  AL    +  E  E+ + ++      
Sbjct: 133 EEAIRLDPLYAEPHNNLSILFERF--GESAHAIAAALEALRLKPEFPEAHLNLANALKSQ 190

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G   +A A    A+++ P 
Sbjct: 191 GRHQEAIAHYREALRLRPD 209


>gi|148655010|ref|YP_001275215.1| hypothetical protein RoseRS_0852 [Roseiflexus sp. RS-1]
 gi|148567120|gb|ABQ89265.1| hypothetical protein RoseRS_0852 [Roseiflexus sp. RS-1]
          Length = 699

 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 53/186 (28%), Gaps = 34/186 (18%)

Query: 7   YFFVISLVICSFIIVSHYPEDV-SITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFF 65
           Y  ++ L I  F  +      V ++ W       +   I            +L   +   
Sbjct: 353 YVALMLLAIGGFCFMPQPARAVPTLLWVGLATLLAALTIGHPRLRLPVVAAVLPFAAYAL 412

Query: 66  LSCPAMLFHMLHKRNYDKGYKALYTGLM-------------------------SIAAHNI 100
           +  PA+           + Y AL   ++                         ++AA ++
Sbjct: 413 VRLPALWRQPDRLLRDRRSYAALIGAMIFLAFMFSTRYISWIESLRYTVPGRAALAAGDV 472

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A ++      +    +  L  +    + LA+     A E   +   +         SL
Sbjct: 473 HRAGRL--LTRAREVAPDNPLRVIDLADLYLAQGDNERALELYRLAASME------HRSL 524

Query: 161 YFESCR 166
           Y ++ R
Sbjct: 525 YAQAMR 530


>gi|15228104|ref|NP_181260.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|75216851|sp|Q9ZUU3|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
 gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
 gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
 gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 757

 Score = 39.9 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 66/203 (32%), Gaps = 25/203 (12%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           A  +  A+ +   +  +H    +  +   LL  Q          A E L+ M  +    E
Sbjct: 373 AGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS--KAGDMAAATEVLKAMATLNVPAE 430

Query: 155 FAVYSLYFESC-RIGDLNSAQRYA------------TKALDISPDAPWVTEAVVQQYVLA 201
              Y +  E+  +    N A +                 L++ P        +++     
Sbjct: 431 AGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS---AYNPIIEYLCNN 487

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH-DAIESLKLCDNSI 260
            + ++A     Q  K         A+  + R   +A +G+  +SY    I S +      
Sbjct: 488 GQTAKAEVLFRQLMKRG--VQDQDALNNLIR--GHAKEGNPDSSYEILKIMSRRGVPRES 543

Query: 261 MASICAAKSLISQNKKRKAEVIL 283
            A     KS +S+ +   A+  L
Sbjct: 544 NAYELLIKSYMSKGEPGDAKTAL 566


>gi|328787832|ref|XP_392318.4| PREDICTED: transmembrane and TPR repeat-containing protein
           CG4341-like [Apis mellifera]
          Length = 843

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 17/182 (9%)

Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L  +L  Q      +   A E   + +   P   +   Y+L        +   A     +
Sbjct: 514 LGSVLSAQ-----GRVAEAEEAFVQALRYRPNMADV-HYNLGILQQGRRNYEEAILSYQR 567

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-------KKNAKEWNRNRAILLIAR 232
           A+   P        +          + A   L           K+ +     R   L+  
Sbjct: 568 AIHFRPSLAQAYVNLGAALASVGRGTEAAAVLRAGASLDGSGLKDKRAHEAARVQALLQL 627

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI---CAAKSLISQNKKRKAEVILEKIWKV 289
               AD+G +  +     E+L    +            ++L    +  +AE   +     
Sbjct: 628 GALYADQGRLQRALSAYREALHALPDHYPPQSVYNLLGETLSRLQQYAEAERWFQASLAS 687

Query: 290 NP 291
            P
Sbjct: 688 QP 689


>gi|327192819|gb|EGE59746.1| hypothetical protein RHECNPAF_1910016 [Rhizobium etli CNPAF512]
          Length = 611

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 58/253 (22%)

Query: 80  NYDKGYKALYTGLMS-------IAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQ 128
                 + L +  ++       +A  N   A K  +   +  +F  + +       L  +
Sbjct: 2   RQRLAIRLLTSAALAAVLSLGGVAGVNAEDAAKTAADAGKTDSFDADSVTTFSGAFLAAR 61

Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  +  Y+ A E  +  LQ     P  R      L       GD+    +YA   L   
Sbjct: 62  TADVDHDYDTAIELYKKALQIEPGNPEIR----QRLMISLLLNGDIKEGVKYAND-LKGD 116

Query: 185 PDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIAR--------SLE 235
           P    +T  V     + + ++  A + L  K  N  +   N  +L  AR        +L 
Sbjct: 117 PSVERITTIVRGMDAVRRDDYKTAESILKYKGPNDLDRMMNDLLLAWARVGAGRGKEALA 176

Query: 236 NADK----------------------GDMIASYHDAIESL------KLCDNSIMASICA- 266
             +K                      GD+ ++     +++          ++ M ++ A 
Sbjct: 177 MVEKMKGPDWVRIFQNYNAGAIAVVTGDVKSARQHLNDAVLDKEGGATAPDTFMRAVMAL 236

Query: 267 AKSLISQNKKRKA 279
           A+   SQ  K+KA
Sbjct: 237 ARLEASQGNKQKA 249


>gi|296202908|ref|XP_002748676.1| PREDICTED: dnaJ homolog subfamily C member 7 [Callithrix jacchus]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|302502963|ref|XP_003013442.1| hypothetical protein ARB_00260 [Arthroderma benhamiae CBS 112371]
 gi|291177006|gb|EFE32802.1| hypothetical protein ARB_00260 [Arthroderma benhamiae CBS 112371]
          Length = 578

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%)

Query: 94  SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +IA     LA  K+ +    +     E L                 A    +  L    T
Sbjct: 315 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            E           R      A+  A K   + P+       +  +     +W  A+    
Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  K A + +R        R+           +  D  E++K     I A +  A++L +
Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470

Query: 273 QNKKRKAEVILEKI 286
             +  K   +  + 
Sbjct: 471 MKEYNKCLDVCTEA 484


>gi|289613844|emb|CBI59327.1| unnamed protein product [Sordaria macrospora]
          Length = 518

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 54/180 (30%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
            +          L   Q  L++ + N A    +  +    +     +        +G  +
Sbjct: 22  AEIASDLPVSNLLASAQSHLSKGETNDALVYYDAAIARDPSNYLTFFKRATTYLSLGRTS 81

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A     K L + P        + +    + +W  A     + +K  +      A +  A
Sbjct: 82  QATDDFNKVLALKPGFEGAHIQLGKLKARSADWDAAREHYEKARKADELAALEDAAVAAA 141

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            + + A   D       A  ++ + + ++      +  L  +         L+ I ++ P
Sbjct: 142 LAEKAAATRDWEECVTQAGAAIMVANRAVALRELRSNCLFERGDLEMGMSDLQHILQMKP 201


>gi|228987647|ref|ZP_04147761.1| TPR domain protein [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228772107|gb|EEM20559.1| TPR domain protein [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 219

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 62/205 (30%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A              ++A    E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIKEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  +N    L    +  EI  +  
Sbjct: 181 YVFEDNNEKALALFKKATEIQPDHF 205


>gi|149917382|ref|ZP_01905880.1| tetratricopeptide repeata protein [Plesiocystis pacifica SIR-1]
 gi|149821719|gb|EDM81115.1| tetratricopeptide repeata protein [Plesiocystis pacifica SIR-1]
          Length = 239

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 58/197 (29%), Gaps = 25/197 (12%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G    A  +  +A++++P        +   Y     +  A +  ++      +  + 
Sbjct: 50  QQTGRAEEAAAHFRRAVELNPAYTEAALNLSVCYSELGRYDEARSIYSEAASRQPKQPKQ 109

Query: 225 R-----------AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           +           A L        A  G +  +      +L+L           A  L   
Sbjct: 110 KGELDAFVRGKLANLHFELGQAYASAGLLEPAVKQMRAALELSPTFADVRTKLAVYLRDL 169

Query: 274 NKKRKAEVILEKIWKVNPH--PEIAN----IYTHLLSENTVGKLKRALRLEEINKESVES 327
            +  KA   L  +    P+  P   +    ++     E      +RA  LE    ++   
Sbjct: 170 GRFDKALEELRTVLGTRPNYVPAYVHLGVTLWRQGRREEAKIPWQRAQSLE---PDNR-- 224

Query: 328 LVIVSKIALEMGSIDQA 344
              + +  L M   + A
Sbjct: 225 ---IVQAYLRMADTNAA 238


>gi|149178264|ref|ZP_01856857.1| TPR repeat protein [Planctomyces maris DSM 8797]
 gi|148842913|gb|EDL57283.1| TPR repeat protein [Planctomyces maris DSM 8797]
          Length = 292

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 2/130 (1%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             + A  + Q+  A +   +MLQ       A++ +   + ++G   +A +Y  +A+ + P
Sbjct: 1   MARQAEEKGQFVKAEQTYRVMLQRNPGNSVALHRMGIVNSKLGRHETATKYLMEAVKVQP 60

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENADKGDMI 243
           + P     +     L  +   A   L +  K      R+     L++       +   + 
Sbjct: 61  ENPKYLTDLGYALYLQNDLPAAEIALEESIKRDPSTKRSFNNLSLVLGHQGRMDEAYQVA 120

Query: 244 ASYHDAIESL 253
            +   A E+ 
Sbjct: 121 RTVMSAEEAH 130


>gi|254245682|ref|ZP_04939003.1| TPR repeat [Burkholderia cenocepacia PC184]
 gi|124870458|gb|EAY62174.1| TPR repeat [Burkholderia cenocepacia PC184]
          Length = 706

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 47/182 (25%), Gaps = 22/182 (12%)

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             +  A   +A +     +GD  A       +     +            I   +  +  
Sbjct: 5   ARKLDAKSALADARGAHARGDRAAFAATLAHAQASAPDDPDMLAAIGAQWIDAGEPERGL 64

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKI-- 334
             L   W    HP  A+    L   + +G+  R   L        ++   +    +++  
Sbjct: 65  APLRD-WIAA-HPREADADVRLRYGDLLGRAGRDDALAAWLDTLRRDPALTPAQTARLED 122

Query: 335 ------------ALEMGSIDQAHAKAMLA-MKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
                       A+      QA      A       K   L LA +E+A  H        
Sbjct: 123 QSLRLVLRQTDDAIARQDYAQARTLLDRASPAGRADKRYALELADLERAQGHYDA-AREA 181

Query: 382 TQ 383
             
Sbjct: 182 LA 183


>gi|117645842|emb|CAL38388.1| hypothetical protein [synthetic construct]
 gi|306921605|dbj|BAJ17882.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [synthetic construct]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|326432559|gb|EGD78129.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
          Length = 931

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 75/265 (28%), Gaps = 51/265 (19%)

Query: 129 IALAERQYNIAHEKLEMML---------QIPATREFAVYSLYFESCRI-GDLNSAQRYAT 178
               + +Y+ A   +E  L         + P+T     Y     +    GD + A  +  
Sbjct: 363 AYADKGEYDRAIAYVEKALAITVETVGEKHPSTAST--YGNLGNAYDSKGDHDKAVHFYE 420

Query: 179 KALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---------KNAKEW 221
           KAL I         P        +   Y    ++ +AI    +           K+    
Sbjct: 421 KALAIKVETLGEKHPSTADTYNNLGGAYDSKGDYKKAIQLYEKALAIQVETLGEKHPSTA 480

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRK 278
           +    +     S    D+         AI +  L +     +           ++    K
Sbjct: 481 STYNNLGNAYASKGEYDRAVQQYEKALAIYAEALGEKHPSTASTYGNLGVAYQNKGHYDK 540

Query: 279 AEVILEKIWKV------NPHPEIANIYTHL--------LSENTVGKLKR-----ALRLEE 319
           A  + EK   +        HP  A  Y +L          +  +   ++        L E
Sbjct: 541 AIELYEKALAIRVEALGEKHPSTATSYGNLGVAYQNKGEYDKAIEFYEKDLAITVETLGE 600

Query: 320 INKESVESLVIVSKIALEMGSIDQA 344
            +  + ++   + +     G  D+A
Sbjct: 601 RHPSTADTYNNLGEAYRHKGKYDKA 625


>gi|298705615|emb|CBJ28866.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1192

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 17/154 (11%)

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K+         ILL  RS+ +   G++ ++  DA  +L L  + I A    A +     +
Sbjct: 457 KDKVAAREMLLILLCNRSVAHLKWGNLGSAKADAQRALDLDPHHIKAYFRRAAAHKQAER 516

Query: 276 KRKAEVILEKIWKVNPHP--------EIANIYTHLLSENTVGKLKRA-LRLEEINKESVE 326
            R+A   L  I ++ P P        +I ++           + K     L+E  KE   
Sbjct: 517 FREALADLRYILRLEPPPRKGVAVSKDILDVQRMAKECEQKVRAKGFGKALQETGKE--- 573

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
                +K A     + +A  K         RK +
Sbjct: 574 -----AKGAKSASELKEAREKWDALRSKDDRKRV 602


>gi|260891961|ref|YP_003238058.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4]
 gi|260864102|gb|ACX51208.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4]
          Length = 192

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 49/124 (39%), Gaps = 10/124 (8%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
               N+               L+    +  ++G +  +     E LKL  ++  A +  A
Sbjct: 62  REEFNRAVAQKDLAK------LLELGAKAREEGKLAEATRTYEEVLKLYPDNTNARLSLA 115

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL----SENTVGKLKRALRLEEINKE 323
           +  +++ K   A   +E I + NP+ ++A  Y  L+     ++    +K   +  ++  +
Sbjct: 116 EIYLAEEKYDAAYQQVEAILQKNPNHQLALFYRGLILGYGKKDYPAAVKDLEKFLKLAPD 175

Query: 324 SVES 327
           + E+
Sbjct: 176 APEA 179



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV- 157
              LA    +Y      + +     L   +I LAE +Y+ A++++E +LQ     + A+ 
Sbjct: 87  EGKLAEATRTYEEVLKLYPDNTNARLSLAEIYLAEEKYDAAYQQVEAILQKNPNHQLALF 146

Query: 158 -YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
              L        D  +A +   K L ++PDAP  ++A     +L +EWS+
Sbjct: 147 YRGL-ILGYGKKDYPAAVKDLEKFLKLAPDAPEASQA----RILIEEWSK 191


>gi|228941563|ref|ZP_04104112.1| TPR domain protein [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974493|ref|ZP_04135060.1| TPR domain protein [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981087|ref|ZP_04141388.1| TPR domain protein [Bacillus thuringiensis Bt407]
 gi|228778628|gb|EEM26894.1| TPR domain protein [Bacillus thuringiensis Bt407]
 gi|228785210|gb|EEM33222.1| TPR domain protein [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228818119|gb|EEM64195.1| TPR domain protein [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326942177|gb|AEA18073.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 219

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFTEAKVVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205


>gi|109115449|ref|XP_001108703.1| PREDICTED: dnaJ homolog subfamily C member 7-like isoform 6 [Macaca
           mulatta]
 gi|90084357|dbj|BAE91020.1| unnamed protein product [Macaca fascicularis]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|78065998|ref|YP_368767.1| cellulose synthase operon C-like protein [Burkholderia sp. 383]
 gi|77966743|gb|ABB08123.1| Cellulose synthase operon C-like protein [Burkholderia sp. 383]
          Length = 1259

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 72/292 (24%), Gaps = 40/292 (13%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPA----TREFAVY-----SLYFESCRIGDLNSAQRY 176
           + +    + +   A ++ E  ++       TR           L      + D   AQ  
Sbjct: 459 QARALADKGERGPAAQRYEAAVRAAPDAAWTRFALARLYRDMGLPQLGRTVMDDGLAQSA 518

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +    +       + V            A    ++         +  A   +A +   
Sbjct: 519 TPEMRYATALYRNSLDDVAGAQAALAPVDDA----HRSDGMRALARKLDAESALADARGA 574

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             +GD  A      ++     +            I   +  +    L   W    HP  A
Sbjct: 575 LARGDRTAFAASLGQAQASAPDDPDMLAAVGAQWIDAGEPDRGLAPLHD-WIAA-HPREA 632

Query: 297 NIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSKIA-----------------LEM 338
           +    L   + +G   R   L    +    E  +  ++ A                 +  
Sbjct: 633 DADVRLRYGDLLGSAGRDDALAAWLDTLRREPSLTPAQSARIEDQSLRLVLRQTDDAIAQ 692

Query: 339 GSIDQAHAKAMLA-MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
               QA      A       K   L LA +E+A  H           A  A 
Sbjct: 693 QDYAQARKLLERASPAGRADKRYALELADLERAQGHYDA------ARAALAP 738



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 102/330 (30%), Gaps = 36/330 (10%)

Query: 72  LFHMLHKR-NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
                  R   D G   L   +M     +  LA+     +      +   L  +   Q A
Sbjct: 488 WTRFALARLYRDMGLPQLGRTVM-----DDGLAQSATPEMRYATALYRNSLDDVAGAQAA 542

Query: 131 LAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           LA        + +  + +     +           +   GD  +      +A   +PD P
Sbjct: 543 LAPVDDAHRSDGMRALARKLDAESALADARG----ALARGDRTAFAASLGQAQASAPDDP 598

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +  AV  Q++ A E  R +  L+               L     L +A + D   +   
Sbjct: 599 DMLAAVGAQWIDAGEPDRGLAPLHDWIAAHPREADADVRLRYGDLLGSAGRDD---ALAA 655

Query: 249 AIESLKLCDNSIMA------------SICAAKSLISQNKKRKAEVILEKIWKV-----NP 291
            +++L+   +   A             +      I+Q    +A  +LE+           
Sbjct: 656 WLDTLRREPSLTPAQSARIEDQSLRLVLRQTDDAIAQQDYAQARKLLERASPAGRADKRY 715

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             E+A++           +   A  +     +  ++ + +++I  + G+   A A+    
Sbjct: 716 ALELADL-ERAQGHYDAARAALAPVVAR-TPDDADTQLALARIDEDSGNRAAALARVQAV 773

Query: 352 MKIAPRKEIFLLLAQIEQ--ANSHNTDKIL 379
           +   P  ++   L+ + +  A     + + 
Sbjct: 774 LARTPDDDVDTQLSAVRRLNALRRPDEAVQ 803


>gi|17229979|ref|NP_486527.1| hypothetical protein all2487 [Nostoc sp. PCC 7120]
 gi|17131579|dbj|BAB74186.1| all2487 [Nostoc sp. PCC 7120]
          Length = 224

 Score = 39.9 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 63/171 (36%), Gaps = 5/171 (2%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           +N  L  LLE  +  +    YN A    +   ++          + +   + G+  +A  
Sbjct: 35  NNAELKRLLEDGKRLVDAGDYNGAIAVYQQAARMEPRNARIHSGIGYLHAKQGNFQAALA 94

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A+ I+P+      AV        +   A     +  + A + NRN     +   + 
Sbjct: 95  AYRRAIAINPNNSDFFYAVGYIKGNMGDTPGA----KEAYRRAIQLNRNNVSAYVGLGIT 150

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +  GD  ++     +++KL  N+       A     + + ++A  +L+K 
Sbjct: 151 QSRLGDFRSANWAFEQAIKLDRNNAQTYEFMAAMYKQRRQTKQASNLLQKA 201


>gi|332702520|ref|ZP_08422608.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552669|gb|EGJ49713.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 362

 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 19/185 (10%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALD 182
           L + +  LA    + A  + E +++     E   +  L  E  R G+   A     KA+ 
Sbjct: 155 LRQAKDLLASGHVDDAIREFEDIVRTQDQSEAYYMQGL--EHLRKGEYGEAIACFHKAVQ 212

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--LLIARSLENADKG 240
           I+       EA+ + +    +   +  FL +  +   E+ R   +  L +    E  D  
Sbjct: 213 INTLFAEAYEAMARAFEAKGDRQSSRMFLKKAAQVHAEFQRLEQVKELFVEVMAEEPDAE 272

Query: 241 DM--------------IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +                 +      ++KL  N   A    A+       + KA  +LE  
Sbjct: 273 NPFLLLGNKLYNGRDFQGAAQAYENAIKLNPNDAWARFHLARVRWMLGHRNKAVELLESC 332

Query: 287 WKVNP 291
             + P
Sbjct: 333 LAMRP 337


>gi|327296371|ref|XP_003232880.1| heat shock protein STI1 [Trichophyton rubrum CBS 118892]
 gi|326465191|gb|EGD90644.1| heat shock protein STI1 [Trichophyton rubrum CBS 118892]
          Length = 578

 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 12/153 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A    +  L    T E           R      A+  A K   + P+       
Sbjct: 344 GDLATAITNYQKSLTEHRTPEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARE 395

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +     +W  A+    +  K A + +R        R+           +  D  E++
Sbjct: 396 LGNKKFKEADWPGAVEAYTEMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAI 451

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           K     + A +  A++L +  +  K   +  + 
Sbjct: 452 KRDPKFVRAYLRKAQALFAMKEYNKCLDVCTEA 484


>gi|167814145|ref|ZP_02445825.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 91]
 gi|167844241|ref|ZP_02469749.1| tetratricopeptide repeat protein [Burkholderia pseudomallei B7210]
 gi|254196773|ref|ZP_04903197.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
 gi|169653516|gb|EDS86209.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
          Length = 602

 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           + P A    +   +Q    N  L       +L  ++AL       A++    + +     
Sbjct: 47  DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 106

Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
             A  +  +   +    D  +A     +    SP +    +      VL  + + A   L
Sbjct: 107 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 163

Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239
           +Q+   A   NR +AI+ +                                A + +    
Sbjct: 164 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 223

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294
            D   +     E+L++  + + A++     L       +A  I      V  +P+     
Sbjct: 224 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 279

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +A    +L  +      K+   +   +      L+ ++ I ++   +D A       +K+
Sbjct: 280 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 339

Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           A +K      + ++ LAQI   + +N      W      A 
Sbjct: 340 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 379


>gi|89899289|ref|YP_521760.1| response regulator receiver domain-containing protein [Rhodoferax
           ferrireducens T118]
 gi|89344026|gb|ABD68229.1| response regulator receiver domain protein [Rhodoferax
           ferrireducens T118]
          Length = 537

 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 47/151 (31%), Gaps = 7/151 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            + P AR +   V    +       L  +L        + Y  A +  + +LQ       
Sbjct: 179 GDYPAARTLFESVLALRSVAWAKTGLGKVL-----FYGQDYAGAVQLFQQVLQENRMYME 233

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           A   L      +GD   AQ+    A+ +SP++P   + +            A     +  
Sbjct: 234 AADWLAKTLDAMGDSAQAQQVLEDAVQLSPNSPIRQKTLGDTAYRNGALDVAQAAFEKTI 293

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASY 246
           K ++        +    +   +D+     + 
Sbjct: 294 KISEFSPHKNPAVYARLARVFSDQDSPEEAL 324


>gi|52346058|ref|NP_001005076.1| RNA polymerase-associated protein CTR9 homolog [Xenopus (Silurana)
           tropicalis]
 gi|82235822|sp|Q6DEU9|CTR9_XENTR RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|49900213|gb|AAH76995.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Xenopus
           (Silurana) tropicalis]
          Length = 1172

 Score = 39.9 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 12/231 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS---AQRYATKALDISPDAPWV 190
            + + A       L +  T   A+  L        + +S     +  +KA  I P  P V
Sbjct: 212 NKLDKARLAFGRALDLNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMV 271

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   +   K++S+ +  L     +  E    +A      +     + D   ++    
Sbjct: 272 LNHLANHFFFKKDYSK-VQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYY 330

Query: 251 ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304
           ++ +    + ++      +  I +  K  A    EK+ K  P+       + ++Y     
Sbjct: 331 QATQFAAASFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDD 390

Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +      K    ++ E   + VE+ + +++I LE   I  A +    A +I
Sbjct: 391 QEKRDIAKSHLKKVTEQYPDDVEAWIELAQI-LEQTDIQNALSAYGTATRI 440


>gi|326477656|gb|EGE01666.1| heat shock protein Sti1 [Trichophyton equinum CBS 127.97]
          Length = 569

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%)

Query: 94  SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +IA     LA  K+ +    +     E L                 A    +  L    T
Sbjct: 306 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 353

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            E           R      A+  A K   + P+       +  +     +W  A+    
Sbjct: 354 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 405

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  K A + +R        R+           +  D  E++K     I A +  A++L +
Sbjct: 406 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 461

Query: 273 QNKKRKAEVILEKI 286
             +  K   +  + 
Sbjct: 462 MKEYNKCLDVCTEA 475


>gi|298480837|ref|ZP_06999032.1| TPR domain protein [Bacteroides sp. D22]
 gi|298272860|gb|EFI14426.1| TPR domain protein [Bacteroides sp. D22]
          Length = 676

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189
           + Y+ A E LE +L++    TR + +      S +  D  +A     KAL++    P  W
Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+V+      +++ A    N+        +   A   I R+L    + ++  +  D 
Sbjct: 196 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249

Query: 250 IESLKLCDN 258
             +L +  N
Sbjct: 250 DLALDIDPN 258


>gi|238592086|ref|XP_002392802.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553]
 gi|215459356|gb|EEB93732.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553]
          Length = 359

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 185 PDAPWVTEA-----VVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           P  P           +    L   ++  A+T +N+  +    W+  +A  L  R      
Sbjct: 110 PALPENPSTGDNTLTLSLQALEAPDYPHALTLVNEALEQGISWDEGKAEALNLRGTFKFL 169

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI 295
            GD+  +  D  +S++L  +   + +  A   + Q+   KA    +K  + NP+ P+I
Sbjct: 170 TGDVDGAKADFNQSIELVPSFTQSWVKIASVYMEQSDPAKAFECFDKAIEHNPNDPDI 227


>gi|212637627|ref|YP_002314152.1| TPR domain-containing protein [Shewanella piezotolerans WP3]
 gi|212559111|gb|ACJ31565.1| TPR repeat protein [Shewanella piezotolerans WP3]
          Length = 444

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 89/309 (28%), Gaps = 46/309 (14%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE--MM 146
             GL+     +   AR      + Q        +Y +     L  +Q   A       +M
Sbjct: 121 SLGLLLTQQGDYDGARSHLRQAASQ---GAPAQIYAMLGYGYLQTQQPQAAKAAYSHALM 177

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           L     +      L   +   GD   A     + L  SP+   +           + W +
Sbjct: 178 LAGDNRQW--QRGLLHAAMAAGDSALANSLTEQLLAASPEDAQLHRLRASLAQQQQLWEQ 235

Query: 207 AITFLNQKKKNAKEWNRNRAILLIA-----------------------RSLENADKGDMI 243
           AI  L   ++   +      +  +                        R     +  D +
Sbjct: 236 AIASLEIAQQLQPDDAVQWQLTQLYFDQGYYTLAQPHLQQLLESGIDGRQQRLLEVADYL 295

Query: 244 ASYHDAIESLKLCDNSIMASICAAK-----------SLISQNKKRKAEV---ILEKIWKV 289
                  ++  L  + +  +  +A             L   N +R       +L K  ++
Sbjct: 296 IGQQQPQQAEALLISLLSNASLSASQRSHGLTSQALLLTDNNSQRSQSKQVGLLNKALRL 355

Query: 290 NP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           +P   P +  +     +   V       R   ++   +E+L   +++ LE  +  +A   
Sbjct: 356 DPLNGPALIALAKRYETNELVQAETLYRRAAALSSVRLEALQRHAQLLLEQQAYHRAQQL 415

Query: 348 AMLAMKIAP 356
              A+K AP
Sbjct: 416 LRQAVKQAP 424


>gi|206969501|ref|ZP_03230455.1| TPR domain protein [Bacillus cereus AH1134]
 gi|229180671|ref|ZP_04308011.1| TPR domain protein [Bacillus cereus 172560W]
 gi|206735189|gb|EDZ52357.1| TPR domain protein [Bacillus cereus AH1134]
 gi|228602816|gb|EEK60297.1| TPR domain protein [Bacillus cereus 172560W]
          Length = 219

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALALFKKAIEIQPDHF 205


>gi|153834096|ref|ZP_01986763.1| cellulose synthase operon C protein [Vibrio harveyi HY01]
 gi|148869561|gb|EDL68556.1| cellulose synthase operon C protein [Vibrio harveyi HY01]
          Length = 1243

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 89/304 (29%), Gaps = 36/304 (11%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL +      + Q+  A       +Q   T+ +A  SL        +  +A +    AL
Sbjct: 377 AYLDQGDALAEKGQFKQAESLYRKAIQSDKTQPYAFTSLGALYLAQKNYAAADKAYIHAL 436

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNAKEWNRNRAILLIARSLEN 236
            +           +   +  ++W+ A +   +     K+  +++ N  ++ +++AR    
Sbjct: 437 KLEQLNGSALRGRLDVRIEQQDWAGAASLAQRFSPAQKQVVSEKINGIQSEIILARLRVA 496

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHP 293
             + D +         + L   S    +  A  + S   K++A+ ++   W  +   P  
Sbjct: 497 IAQNDQVGMQSAVEALIALKPTSPWLRLDIAGVVRSMGDKQRADALM-AEWTASSSDPEM 555

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + A+             +     + E          +  ++ L+    D           
Sbjct: 556 KFAHALYLAQDFKVEEAISELESVPEKAVTPSMQRNLT-RLKLDAELQDIQQRYLEEPAS 614

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL-----------S 402
           +          A++         ++         A     W+  D  +           S
Sbjct: 615 VQ---------AKLHALEQDYQGQVQA-LARLAGA-----WVEIDQAVEAERIYRSLEQS 659

Query: 403 SVWL 406
             W 
Sbjct: 660 PHWS 663


>gi|126740549|ref|ZP_01756236.1| TPR domain protein [Roseobacter sp. SK209-2-6]
 gi|126718350|gb|EBA15065.1| TPR domain protein [Roseobacter sp. SK209-2-6]
          Length = 570

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 79/224 (35%), Gaps = 8/224 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           M + V+Q+ +  +   V LL  +I     +Y ++ +  + + +       A         
Sbjct: 278 MFARVAQKLSAEHVDAV-LLSAEILDQLGRYELSIDTYKKVPRNHPDYYAAEMGRAEALR 336

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R     +A     + +   P  P V+ ++       +E++ AI   +    N      +R
Sbjct: 337 RSAKPEAATEVLEQLVREFPTLPQVSVSLGDLLRQQEEYAGAIKAYDSALANTPTEANSR 396

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILE 284
             LL AR + +        +  D   SL L   S    +      +  Q K  +A  +++
Sbjct: 397 WFLLYARGISHERLSHWPEAEADFRSSLALRPESPQVLNYLGYSLVEKQEKLDEALDMIQ 456

Query: 285 KIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINK 322
           +     P            +Y     E  VG ++RA+ L  ++ 
Sbjct: 457 RAVAARPESGYIVDSLGWVLYRLGRYEEAVGHMERAVALMPVDP 500


>gi|123448512|ref|XP_001312985.1| TPR Domain containing protein [Trichomonas vaginalis G3]
 gi|121894852|gb|EAY00056.1| TPR Domain containing protein [Trichomonas vaginalis G3]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 66/242 (27%), Gaps = 52/242 (21%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           HN   A +M    +      +  L   L     L     + A +     +        A 
Sbjct: 284 HNSDAAVQMFQRAAGIDHSCSYPLA--LAGHELLLLDSLSEASKLFRESIDRNPQEWSAW 341

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y L     +  +  +AQ Y  KALD +PD+                              
Sbjct: 342 YGLGSVHFKQDNFGAAQYYMRKALDANPDSS----------------------------- 372

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMA---SICAAKSLISQ 273
                    +L    ++     G+   +      ++ L   N +      + AA S    
Sbjct: 373 ---------VLHYVYAMILRKCGNEEEASEHFDLAISLDPSNLVPVFQKGVMAADS---- 419

Query: 274 NKKRKAEVILEKIWKVNPH-PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
               +A  +L K   + PH P IA    +    L +           L   + E  E   
Sbjct: 420 GDPIEALELLNKAESLAPHEPGIAYTKAVIAESLGDTAGAAEMYTNALVFGHPEKKEIHS 479

Query: 330 IV 331
            +
Sbjct: 480 AL 481



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 19/245 (7%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATK 179
           LV LL  +      +Y  A      + +I       V  +Y  +  ++ D       + +
Sbjct: 203 LVLLLSAEYYFRCSKYTEAAAIFSRLYEIHPHTVLGV-DIYSTTLWQLKDEKKLNEVSRR 261

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL+I+P+ P    A      +      A+    +      + + +  + L     E    
Sbjct: 262 ALEIAPNKPESWVAAGNLLSIQHNSDAAVQMFQRA--AGIDHSCSYPLALAGH--ELLLL 317

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IA 296
             +  +     ES+        A          Q+    A+  + K    N  P+   + 
Sbjct: 318 DSLSEASKLFRESIDRNPQEWSAWYGLGSVHFKQDNFGAAQYYMRKALDAN--PDSSVLH 375

Query: 297 NIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            +Y  +       E        A+ L   +  ++  +     +A + G   +A      A
Sbjct: 376 YVYAMILRKCGNEEEASEHFDLAISL---DPSNLVPVFQKGVMAADSGDPIEALELLNKA 432

Query: 352 MKIAP 356
             +AP
Sbjct: 433 ESLAP 437


>gi|147905822|ref|NP_001086446.1| RNA polymerase-associated protein CTR9 homolog [Xenopus laevis]
 gi|82249387|sp|Q4QR29|CTR9_XENLA RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|67677972|gb|AAH97638.1| LOC446236 protein [Xenopus laevis]
          Length = 1157

 Score = 39.9 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 12/231 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS---AQRYATKALDISPDAPWV 190
            + + A       L +  T   A+  L        + +S     +  +KA  I P  P V
Sbjct: 212 NKLDKARLAFGRALDLNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMV 271

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   +   K++S+ +  L     +  E    +A      +     + D   ++    
Sbjct: 272 LNHLANHFFFKKDYSK-VQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYY 330

Query: 251 ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304
           ++ +    + ++      +  I +  K  A    EK+ K  P+       + ++Y     
Sbjct: 331 QATQFAAASFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDD 390

Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +      K    ++ E   + VE+ + +++I LE   I  A +    A +I
Sbjct: 391 QEKRDIAKSHLKKVTEQYPDDVEAWIELAQI-LEQTDIQNALSAYGTATRI 440


>gi|294812872|ref|ZP_06771515.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|326441351|ref|ZP_08216085.1| hypothetical protein SclaA2_09804 [Streptomyces clavuligerus ATCC
           27064]
 gi|294325471|gb|EFG07114.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
          Length = 485

 Score = 39.9 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 79/291 (27%), Gaps = 18/291 (6%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             +        +Y  L+   +      + +H  + +    +       L  Q+       
Sbjct: 146 RAQQQRPRRWTVYRALIDAQSGVGAY-KAVHGALDRLTALYQGSQSRALAAQVYRERGWR 204

Query: 137 NIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             A       +   A    R  A+  L   +   G+   A      AL ++P+       
Sbjct: 205 EDASANAYDAVAAAAGTTERAVALRRLGDLAWERGEPREAVAGYDAALRLAPELHPARAG 264

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS--YHDAIE 251
             +          A+                     +  SL   ++ +   +     A  
Sbjct: 265 RARALAALGRTDAALAEYRAALTRFPLPEYALEAGELYESLGRHEEAEESYAAVLETADR 324

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIAN-----IYTHLLSE 305
           + +   +    ++   +         +A  +L   W+      +IA+     +Y    ++
Sbjct: 325 AERYGVD---QTLTRGRYEADHGDPDEAVRLLTDAWEAGRRSTQIADGLGWALYRAGRAD 381

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +   KRA +    +           +I   +G    A      A+++ P
Sbjct: 382 EALPYAKRATKEGLRSPLFAYHR---GQIERSLGLYGSARRNIGTALRVNP 429


>gi|284097543|ref|ZP_06385614.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283830950|gb|EFC34989.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 547

 Score = 39.9 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 94/291 (32%), Gaps = 17/291 (5%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
              K   D G  A     +++        N+  AR+ +    Q H         L    +
Sbjct: 148 WFQKSVKDAGEDAPVAWYVALGQIETERGNLEQARRYYIVAVQLHPETTAAYNNL--GHV 205

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            L   + + A       L    T   A +       R      AQR+  +A+  +PD P 
Sbjct: 206 LLKLNRIDEADAAFREALTQDKTLASAAFGRGEVGARRRQFTVAQRFYERAIRHAPDEPL 265

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
             +++            A     + ++   E  R +A   I       +KG    +    
Sbjct: 266 FHKSLADTLRNIGNTEDAEAAEARYRRKLAERYRRQAHWFI-------EKGQPQRALTPL 318

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---EN 306
            +++   +    A    A   +   K   A+   +++ ++ P+   A ++  ++     N
Sbjct: 319 QKAIASDETFTFALKDYAYVQMQLGKFADAKQSYQRVLRIEPNSRQALLHLGMIEAKFGN 378

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +   L L +   + +++ V ++ +    G +  A     + +   P 
Sbjct: 379 QATAVSHYLALIQHEPDFMDTYVQLANLQESAGDLQAAEHALTMGIHHEPT 429


>gi|302877718|ref|YP_003846282.1| TPR repeat-containing protein [Gallionella capsiferriformans ES-2]
 gi|302580507|gb|ADL54518.1| TPR repeat-containing protein [Gallionella capsiferriformans ES-2]
          Length = 585

 Score = 39.9 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
             +E L   L  + A       +A E  + + ++      A  +    +   GD+N A  
Sbjct: 60  LSSELLYEFLLAEFASQRGHQALAVEGSQELARLTRDPRLAKRA-AQLALESGDMNRAVE 118

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
                 +  P A   T  +    +       A     +  K+ +       + L   +  
Sbjct: 119 AFRFWQETEPSALMATRILSSLLLRGGRLDEARIEFVKVLKSEEPAVGAVFMQLYTMAAS 178

Query: 236 NADKGDMIASYH-------DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
             DK  ++              E+  L      A++   +  ++ ++ R+A   L+  W 
Sbjct: 179 YPDKAAVLQLMRELAAPYPQVAEAHWLVAQLATAAL---EEKLALSEVRRA-RELKPEWD 234

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
               P        L        L    R   ++  +    +  ++  L       A  + 
Sbjct: 235 A---PVSLEAQL-LNKSEPQKSLALLQRHLSVHPAAGGIRLQYARALLTQKQYQAAREEF 290

Query: 349 MLAMKIAPR 357
            L    +P 
Sbjct: 291 QLLATASPD 299



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 92/271 (33%), Gaps = 9/271 (3%)

Query: 86  KALYTGLMS-IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           + LY  L++  A+     A  +           +  L      Q+AL     N A E   
Sbjct: 63  ELLYEFLLAEFASQRGHQALAVEGSQELARLTRDPRLAKR-AAQLALESGDMNRAVEAFR 121

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
              +   +   A   L     R G L+ A+    K   +  + P V    +Q Y +A  +
Sbjct: 122 FWQETEPSALMATRILSSLLLRGGRLDEARIEFVK--VLKSEEPAVGAVFMQLYTMAASY 179

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
                 L   ++ A  +    A      +       +   +  +   + +L         
Sbjct: 180 PDKAAVLQLMRELAAPYP-QVAEAHWLVAQLATAALEEKLALSEVRRARELKPEWDAPVS 238

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEIN 321
             A+ L ++++ +K+  +L++   V+P      +      L  +      +    L   +
Sbjct: 239 LEAQLL-NKSEPQKSLALLQRHLSVHPAAGGIRLQYARALLTQKQYQAAREEFQLLATAS 297

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            ++V+    ++ I+L++  +  A  +   A+
Sbjct: 298 PDNVDLAFAIALISLQLNDLSGAELQFKAAL 328


>gi|94265133|ref|ZP_01288897.1| TPR repeat [delta proteobacterium MLMS-1]
 gi|93454372|gb|EAT04673.1| TPR repeat [delta proteobacterium MLMS-1]
          Length = 438

 Score = 39.9 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             +  L  + A    +Y  A    E  +L  P +    +  L     R+G    A++Y  
Sbjct: 63  PEINFLLGRAAFETGRYEEAVMAYERVLLSNPESGRARLE-LARAYMRLGSGEIARQYFR 121

Query: 179 KALDISP 185
           + L  +P
Sbjct: 122 EVLATNP 128


>gi|270264731|ref|ZP_06192996.1| hypothetical protein SOD_i01480 [Serratia odorifera 4Rx13]
 gi|270041414|gb|EFA14513.1| hypothetical protein SOD_i01480 [Serratia odorifera 4Rx13]
          Length = 258

 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 63/200 (31%), Gaps = 20/200 (10%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL++  + + P           +     EYL           +   N A + LE   
Sbjct: 20  LAAGLLAGCSGSSPEKDAQPEAGQTRLQLGLEYLK----------QGDLNAARQNLEKAA 69

Query: 148 ----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
               Q   T+      +     RIG+  +A++   +AL ++P+   V            +
Sbjct: 70  DAAPQDYRTQL----GMALYEQRIGENGAAEQRYQQALKLAPNNGTVLNNYGAFLCSLGQ 125

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  A    +             ++            G    +      +LK+  +     
Sbjct: 126 YVPAQQQFSAAALAPDYGQVADSLENAGYC--FLKAGQNDEARTLLTRALKVDPDKGTPL 183

Query: 264 ICAAKSLISQNKKRKAEVIL 283
           +  A+    + K+ +++++L
Sbjct: 184 LVEAEKQFGEGKRAQSQLLL 203


>gi|196232370|ref|ZP_03131223.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223442|gb|EDY17959.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 779

 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 19/195 (9%), Positives = 55/195 (28%), Gaps = 11/195 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G  + A      A+ + PD                +   A+    +      E+    
Sbjct: 32  AQGRTDEAIAAYDHAILLKPDYTEAHYNRGNALRSQGKLEEALAAFCKAIVLKPEY---- 87

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A       +   + G +  + +    +++   +   A      +   +     A     +
Sbjct: 88  AEAYYNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYRR 147

Query: 286 IWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             ++   P  A  + +L      +  +   +   L    +  +  E+   +     E   
Sbjct: 148 AIQIR--PNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQFPEAYHNLGMALAEQRR 205

Query: 341 IDQAHAKAMLAMKIA 355
           +++A      A+++ 
Sbjct: 206 LEEATQAYRRALELN 220



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 67/209 (32%), Gaps = 20/209 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G   SA     +A+ I P+       +      A + + AIT          ++    
Sbjct: 134 RRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQFPEAY 193

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L +A + E     +   +Y  A+E           +     +LI Q    +       
Sbjct: 194 HNLGMALA-EQRRLEEATQAYRRALELNSNAPQ--PWNNL-GTTLIEQGLFTEGATACNH 249

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEIN------KESVESLVIVSKIALEM 338
              ++  P+ A+  ++L     +  L R    +           ++      +  +  + 
Sbjct: 250 ALALD--PDFADAQSNL--GVALAGLNRFAEAIAAFRSALQLQPDNATVHFNLGNVFRDQ 305

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            ++DQA  +   A+ + P     + +  I
Sbjct: 306 RNLDQAVDEYQRALTLEP-----MFMEAI 329


>gi|168757794|ref|ZP_02782801.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168761165|ref|ZP_02786172.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168768648|ref|ZP_02793655.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168798926|ref|ZP_02823933.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195936695|ref|ZP_03082077.1| hypothetical protein EscherichcoliO157_09575 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806760|ref|ZP_03249097.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|217327817|ref|ZP_03443900.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254794498|ref|YP_003079335.1| hypothetical protein ECSP_3493 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223016|ref|ZP_05937297.1| hypothetical protein EscherichiacoliO157_00205 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259433|ref|ZP_05951966.1| hypothetical protein EscherichiacoliO157EcO_27026 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|189355290|gb|EDU73709.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362314|gb|EDU80733.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368379|gb|EDU86795.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189378652|gb|EDU97068.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208726561|gb|EDZ76162.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|217320184|gb|EEC28609.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254593898|gb|ACT73259.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|326340354|gb|EGD64158.1| hypothetical protein ECF_04070 [Escherichia coli O157:H7 str. 1125]
 gi|326345038|gb|EGD68782.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           1044]
          Length = 1093

 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|241206107|ref|YP_002977203.1| adenylate/guanylate cyclase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859997|gb|ACS57664.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 595

 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 9/127 (7%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPW-VTE 192
               A  + + +   P + E  +  L        GD   A      ++ + P  P  + +
Sbjct: 439 DRAQAEVQ-QGLALQPNSAELLL--LMAHIQIFSGDPAGALETLDASMRLDPHHPEILFQ 495

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                +    E+ +AI  + Q+ +   +     A+L       + D+     S     ++
Sbjct: 496 FRADAHFSLGEYEQAIAAIEQRLQQNSQSETAYALLASCY--GHLDR--PEESRQAWEKA 551

Query: 253 LKLCDNS 259
           L++  + 
Sbjct: 552 LRINPDF 558


>gi|21674447|ref|NP_662512.1| TPR domain-containing protein [Chlorobium tepidum TLS]
 gi|21647633|gb|AAM72854.1| TPR domain protein [Chlorobium tepidum TLS]
          Length = 551

 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 8/139 (5%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--MLQIPATREFAVYSL 160
           AR       +    +  YL YL    +A   R Y+ A E      +L+   T    +  L
Sbjct: 75  ARVYGEAAVRLDPSNRYYLRYL--AVVAHDMRDYDRAAELYGQASLLEPDRTEIMYLQGL 132

Query: 161 -YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            Y  + R   L  A     KA+ I P         +   +  K +  AI    Q  K   
Sbjct: 133 EYMAAKR---LEPALEVFRKAVRIDPYNEAAFAQTLALEIALKHYPEAIDTSKQLLKLGG 189

Query: 220 EWNRNRAILLIARSLENAD 238
              +    L    +    +
Sbjct: 190 NERKIGITLAELYTKTGQE 208


>gi|11467297|ref|NP_043154.1| photosystem I assembly protein Ycf3 [Cyanophora paradoxa]
 gi|1351776|sp|P48191|YCF3_CYAPA RecName: Full=Photosystem I assembly protein ycf3
 gi|1016098|gb|AAA81185.1| ycf3 [Cyanophora paradoxa]
          Length = 173

 Score = 39.9 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 10/99 (10%)

Query: 126 EVQIALAERQYNIA-HEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +   A +E  Y  A     E +   + P  + +  Y++       GD   A  Y  +ALD
Sbjct: 41  DGMSAQSEGAYAEALENYYEALRLEEDPYDKSYTFYNIALIHTSNGDQTKALEYYRQALD 100

Query: 183 ISPDAPWVTE--AVV-----QQYVLAKEWSRAITFLNQK 214
           ++P  P      AV+     +Q     +   A    +Q 
Sbjct: 101 LNPKMPQALNNMAVIYHAQGEQAAEQGDMEMAEALFDQA 139


>gi|326427496|gb|EGD73066.1| RDX protein [Salpingoeca sp. ATCC 50818]
          Length = 630

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 62/175 (35%), Gaps = 24/175 (13%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH-----EKLEMMLQIPATR 153
           +    ++M +   ++    +    +L   + A  + +   A      ++ E   +     
Sbjct: 303 DTIEVQQMKAQAREEKALRHAERAHLAREKQARMDAERKRAELEKRVKEYEAEARR---- 358

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                    ++    +  +A+    K   +  +A       ++   L ++   +I  +  
Sbjct: 359 -------AMQALAQSEK-TARDLEEKMKRVEAEAAERERLRLEAERLKRQAEESIAQMRS 410

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
            +  ++E  R     ++AR+ E  +K   + +     E  +  ++   A++ AAK
Sbjct: 411 SQTASEEEKRM----ILARTREAEEKAKQLEAEAAKRE--RDAEDLQ-AALMAAK 458


>gi|320640898|gb|EFX10386.1| hypothetical protein ECO5101_04692 [Escherichia coli O157:H7 str.
           G5101]
          Length = 1093

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|296122435|ref|YP_003630213.1| hypothetical protein Plim_2188 [Planctomyces limnophilus DSM 3776]
 gi|296014775|gb|ADG68014.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
           DSM 3776]
          Length = 442

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 18/165 (10%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+  +A +   +AL ++P    +   +      +  ++ A    +   +   E+   
Sbjct: 293 LDSGETVAAIQAFRRALLLAPHEASIHFQLADALYRSGNYAGAAERYHVAVECDAEYIEA 352

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L    +      GD  A+      +L L  +   A +  A+      +  KA     
Sbjct: 353 WTQLGCVLA----QMGDTKAASEAFEAALLLHPDYPDAHLHLAELFEQIGQHLKA----- 403

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
                 PH      Y    +      + R  RLE  + ++ ES +
Sbjct: 404 -----RPH---WLRYLDFDNRGPWADMAR-ERLERSHGDASESPL 439


>gi|163847447|ref|YP_001635491.1| hypothetical protein Caur_1887 [Chloroflexus aurantiacus J-10-fl]
 gi|222525297|ref|YP_002569768.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163668736|gb|ABY35102.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449176|gb|ACM53442.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 324

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 86/262 (32%), Gaps = 33/262 (12%)

Query: 20  IVSHYPEDVSITWGNRLYRTSP--FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLH 77
            ++H+       W  ++   +P    I+++L + +   ++L       L     L   L 
Sbjct: 15  WIAHH-------WIGQVLLRTPELPGIIAVLLWMVLGGVVLINALPAVLCSLWFLSRYLL 67

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
            R   + Y+ L              A ++       + F  +  V+ L   IAL   +  
Sbjct: 68  IR---QTYRLL-------NNGQYHSAMRLAQIAKSLNPFSAD--VHWLLGLIALQRNRPR 115

Query: 138 IAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           +A + L+    +         A+ + + E+    +   A +YA KAL ++P        +
Sbjct: 116 VAIDHLKKACRLDPDNPQVYAALSAAFVEA---EEPKLAIQYAKKALAMNPGLYGAAMVL 172

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                 +++    +    ++  N       RA+   A +    + G    +     + + 
Sbjct: 173 SDCTPDSEQ----VEHYLRQMINTVRRPVERAVACCALANYLIEIGRRSEAESFLAQVIP 228

Query: 255 LCDNSIMASICAAKSLISQNKK 276
           L      AS    +      + 
Sbjct: 229 LVPACPPAS--RGQLHYRLGEL 248


>gi|72161803|ref|YP_289460.1| hypothetical protein Tfu_1399 [Thermobifida fusca YX]
 gi|71915535|gb|AAZ55437.1| hypothetical protein Tfu_1399 [Thermobifida fusca YX]
          Length = 367

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 79/268 (29%), Gaps = 9/268 (3%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRI 167
            S              + +        + A E  E ++    P  R  A   L      +
Sbjct: 7   ASPPRLDDPAAATLCSQARDLAEAGHADRAAELYERVVADAGPRYRAQAALGLAVVRDHL 66

Query: 168 GDLNSAQRYATKALDIS-PDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKNAKEWNRNR 225
           GD   A++    A+  + P+        +        +   A        +      R  
Sbjct: 67  GDTAGARQADETAIAAADPEFSPRAAYHLALLCEKEGDGDAAARAWQTVVEFGN--QRYL 124

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKAEVIL 283
                  +     +GD   +      +L   D      A+   A+ L+ +    +A  +L
Sbjct: 125 GAAHHGLARLAEARGDDETARSHWQYALNAADPQTVADAAREYARRLLERGAAAEAAEVL 184

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSID 342
            +    +  P++  +   +  E  + +   AL  +  +  ++  +  +++++    G   
Sbjct: 185 ARGLAAHDTPDLRLLLGAVRVEQAIAEFDTALAQQPADPHDTAVARELLARLLAVRGDSA 244

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            A       +     +    + A++ + 
Sbjct: 245 TAERVWYDGLTHDDPQTAAEVRARLRRG 272



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 18/210 (8%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
             +   AL   ++     +   AR+                       +   E   + A 
Sbjct: 50  RYRAQAALGLAVVRDHLGDTAGARQADETAIAAADPEFSPRAAYHLALLCEKEGDGDAAA 109

Query: 141 EKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
              + +++    R      + L   +   GD  +A+ +   AL+ +     V +A  +  
Sbjct: 110 RAWQTVVEFGNQRYLGAAHHGLARLAEARGDDETARSHWQYALNAADPQT-VADAAREY- 167

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILL-----IARSLENADKGDMIASYHDAIESL 253
                   A   L +           R +       +   L        IA +  A+   
Sbjct: 168 --------ARRLLERGAAAEAAEVLARGLAAHDTPDLRLLLGAVRVEQAIAEFDTALAQQ 219

Query: 254 KLCD-NSIMASICAAKSLISQNKKRKAEVI 282
                ++ +A    A+ L  +     AE +
Sbjct: 220 PADPHDTAVARELLARLLAVRGDSATAERV 249


>gi|17547886|ref|NP_521288.1| hypothetical protein RSc3167 [Ralstonia solanacearum GMI1000]
 gi|17430192|emb|CAD16955.1| probable tpr domain protein [Ralstonia solanacearum GMI1000]
          Length = 296

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 17/221 (7%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A KAL I PD      ++    +   +W      L +    A E N   AI     
Sbjct: 47  AKMAARKALQIEPDLGEAYASLAHVRLHDWDWVD----LERDFLRAIELNPGHAIAYYWY 102

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +      G    +     +S ++   + + +   A  L    +  +A   L K  +++P 
Sbjct: 103 AEYLMMAGRAEDAIARVRQSQQMDPLNSVLNSSVAIILYLARRYDQAREELNKALEIDPN 162

Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               H  +  +Y       + + ++++A+ L      S E+L  +++       +  A  
Sbjct: 163 HFLLHFRLGLVYQQQKLFHDAIEEMQKAVTLSGR---STEALTGLAQT-YAAADMRAAMQ 218

Query: 347 KAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYWTQSA 385
           + + A++    +       +A++   +  + ++   W + A
Sbjct: 219 QIVDALETESEQHYVHPYNMAKV-FGSLGDKEQTFGWLEKA 258


>gi|27382848|ref|NP_774377.1| adenylate cyclase [Bradyrhizobium japonicum USDA 110]
 gi|27356021|dbj|BAC53002.1| blr7737 [Bradyrhizobium japonicum USDA 110]
          Length = 619

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 47/180 (26%), Gaps = 24/180 (13%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L++          +    +       +E    L              A       L    
Sbjct: 297 LIAPETGEQLWTGRYDRDIGDFFAMQDEITTNLSAAIATEI----VRAEASAPARLSTDV 352

Query: 152 T---REF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL------- 200
           T   R    +   Y +     DL +A     +A+ + P        +    +        
Sbjct: 353 TAWDRFLKGLSHYYRQ--TKEDLAAAIDLFREAIAVDPKLSIAHAYLATIQIQSIQFGWV 410

Query: 201 ---AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               + W+ A+       +     +   +IL  A ++E    G   A+   A  ++ L  
Sbjct: 411 KGTREMWAEAMNLAETSVRLDPRSSFAFSILSWAHAME----GHYEAAMDAAKRAVALNP 466


>gi|87306864|ref|ZP_01089010.1| probable tetratricopeptide repeat family protein [Blastopirellula
           marina DSM 3645]
 gi|87290237|gb|EAQ82125.1| probable tetratricopeptide repeat family protein [Blastopirellula
           marina DSM 3645]
          Length = 650

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 22/164 (13%)

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE-- 280
              AILL   +     +G +  +   A ++  + D+ +      A +L  +   R AE  
Sbjct: 310 SEEAILLYLLAEAKLVQGKIDQATTVADQAHHMNDSLLDNVFLTADALHKRGLIRWAERE 369

Query: 281 --VILEKI------WKVNPHPEIANIYTHLLSENTVGKL------------KRALRLEEI 320
              +++K       +   P  ++  +            +            KR    EE 
Sbjct: 370 YRRVIDKEGPFSPRYSAWPTRQLGEMLADRKRYADAAGVYKPLVDVYDAETKRGKTSEEA 429

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
             +       +++ A + G I+ A  +   A +  P +   L++
Sbjct: 430 EGDRSRYHYFLARAAEKRGDIEAAKEELKKANQRDPFEVDVLIM 473


>gi|116751065|ref|YP_847752.1| peptidase M48, Ste24p [Syntrophobacter fumaroxidans MPOB]
 gi|116700129|gb|ABK19317.1| peptidase M48, Ste24p [Syntrophobacter fumaroxidans MPOB]
          Length = 480

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 4/132 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL       A         +      A Y +     R GD   A     +A+ + P +P
Sbjct: 275 AALIADYSEPARAMERFTAGVKKREAEAFYGMGRLYMRQGDNAQALSMLQEAVRLRPGSP 334

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           ++  ++ + Y        A   L          + +  I     +L   D+G    +   
Sbjct: 335 FILSSLGKVYHQLGRLPEAQKALQTAL----LMDSSTIIAQYRLALVLQDQGKREEALEH 390

Query: 249 AIESLKLCDNSI 260
                +   +  
Sbjct: 391 LQSIQRYALSFP 402


>gi|309790290|ref|ZP_07684858.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308227678|gb|EFO81338.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 290

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 4/112 (3%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +          + A  AL + P +      +   Y+   +   AI+ L Q  +    +  
Sbjct: 76  AVEAAQYQRGLQLARIALYLYPFSADTHALLGSLYLGMGQAGAAISALRQAVR----YYP 131

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +A L +A S    +     A+  +A  +L+L      A +  A +  + N 
Sbjct: 132 LQAGLHVALSAALLEDEQPQAALEEASRALQLDPRYAPAYLHHASAAEALNN 183


>gi|307824966|ref|ZP_07655188.1| PAS/PAC sensor hybrid histidine kinase [Methylobacter tundripaludum
           SV96]
 gi|307734013|gb|EFO04868.1| PAS/PAC sensor hybrid histidine kinase [Methylobacter tundripaludum
           SV96]
          Length = 1759

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 20/175 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPA------TREFAVYSLYFESCRIGDLNSAQRYATKA 180
                    ++ A E  + ML+            +A+  L +     GDL SA+    +A
Sbjct: 228 AIAYELSDHFSEAGEYYQRMLEQARIAGSRLMEAYALLGLGYTHNNRGDLKSAEPLIREA 287

Query: 181 LDIS-----P-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--LLIAR 232
           + +      P    +   A+       + ++  +   ++  +  + +     +  +L AR
Sbjct: 288 VAVFHAIDVPFSVNFSQFALADNLRKQQRYAETLPIFDEVIERYQRYPNKIGLWWVLNAR 347

Query: 233 SLENADKGDMIASYHDAIESLKLCDN------SIMASICAAKSLISQNKKRKAEV 281
           S      G +  ++ D  ++ KL            ++   A+   ++   R+A  
Sbjct: 348 STHQMALGHIADAHRDVEQAYKLAKEIGVPLYLTDSAKRLAEIAAAKGDYRQAYR 402


>gi|296282214|ref|ZP_06860212.1| transmembrane protein [Citromicrobium bathyomarinum JL354]
          Length = 642

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 25/218 (11%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWN 222
           D + A++  ++AL I         A  +  V         EW+ A+    +  K A+ + 
Sbjct: 204 DFDYAKQLHSEALAIQLKLGMSDLAANELLVRGYTKLKDGEWTDAVADFRESAKQARSYG 263

Query: 223 RNRAILL-----IARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNK 275
              A+          + E     D       A + L   D +  + A+   AK  + +  
Sbjct: 264 NQYAVDYALLGVCQAASEGGKIADAAPECERAYQGLGKPDEAMALPATALMAKLFVERGN 323

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-RALRLEEINKESVESLVIVSKI 334
             +A  IL+        P IA       S++ V  L+ RA  L  +   + ++   + + 
Sbjct: 324 PGRALAILD--------PMIAKGKQENASDDWVMALETRAQALFALG-RNAQAYEQMREA 374

Query: 335 ALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQA 370
                +   A  ++  A   A    +E+  LLA+ E+A
Sbjct: 375 NEAAKTFHNADMQSGAAALQARFQTRELQNLLAEEERA 412


>gi|260752475|ref|YP_003225368.1| cellulase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258551838|gb|ACV74784.1| Cellulase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 1667

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 36/98 (36%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +I       + A      ML+       A+ +    + + G+ + A++   +   ++P 
Sbjct: 554 ARIYQDAGLTDKAQSLYHYMLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPG 613

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            P+V  A  +      +  +A+  L +  +  +   R 
Sbjct: 614 NPYVYLASARFEKSKSDDEQALKDLKKAHRVYQRMVRQ 651



 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 28/249 (11%)

Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIP--ATREFAVY--SLYFESCRIGDLNSAQR 175
           + +   +        +   A   L  +   P  +  +  +    L     ++GD+  A  
Sbjct: 402 INIALARAKRMSLYGRRGDAIGLLRSLANDPNRSISQLGMIADGL----LQLGDVEDAAF 457

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-----NQKKKNAKEWNRNRAILLI 230
            A  +L +        +A +   +    +  A  F+        + +   +      L I
Sbjct: 458 LAEHSLSLPLGEANDYQASLSVLIRTGHYDTASDFISQIASEMSRHDQNGYKMLNRTLAI 517

Query: 231 ARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           AR+     K   + +    H A E     DN +      A+         KA+ +    +
Sbjct: 518 ARADMMRQKKLYMPAFDVLHQAWEETGGGDNILP---VLARIYQDAGLTDKAQSL--YHY 572

Query: 288 KVNPHPEIANIYTH----LLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSID 342
            +  HP  A+   +       +    + ++A  RL+++   +    +  ++        +
Sbjct: 573 MLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPGNPYVYLASARFEKSKSDDE 632

Query: 343 QAHAKAMLA 351
           QA      A
Sbjct: 633 QALKDLKKA 641


>gi|219118732|ref|XP_002180133.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408390|gb|EEC48324.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1008

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 8/128 (6%)

Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             G + +A+     AL + P     W+    +++             L ++ ++A     
Sbjct: 578 ARGSVVTARSILAHALRVFPSKRVLWMQAVELERQ------HGTAVTLEERLRDATHALP 631

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              I  + R+ E    G +  +     ++     +S    + AAK     ++  +A V+ 
Sbjct: 632 RVEIFWLLRAKEQWMAGKVDEARQILTDAFAANPDSESVWLAAAKLEWENDELERARVLF 691

Query: 284 EKIWKVNP 291
            +  +  P
Sbjct: 692 ARARERAP 699



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 86/299 (28%), Gaps = 42/299 (14%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA- 187
            A  E   +     L   L+   T       L+  +  + + + A+     A++  P   
Sbjct: 405 AASLETADSAKKAVLRKALEANPTSTL----LWKAAIDLEEADDARVLLAVAVEKVPQDV 460

Query: 188 -PWVTEAVVQ-QYVLAKEWSRAITFL--------NQKKKNAKEWNRNRAILLIARSLENA 237
             W+  A ++      K  ++A   L           K    + + +    ++ R++ + 
Sbjct: 461 DLWLALARLETYQSAQKVLNKARKALPSDRSVWLAAAKLEESQDHVDTVSKIVDRAVRSL 520

Query: 238 DKGDMIASYHDAIE----SLKLCDNSIMASICA-------------------AKSLISQN 274
            K D + S    +E    +         A+I                     AK+ +++ 
Sbjct: 521 RKQDAVISREQWLEEAEKAESADAPITSAAIIHHTIGQDVEEEDCLRTWSEDAKACVARG 580

Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIV 331
               A  IL    +V P    +      L       V   +R               ++ 
Sbjct: 581 SVVTARSILAHALRVFPSKRVLWMQAVELERQHGTAVTLEERLRDATHALPRVEIFWLLR 640

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAM 389
           +K     G +D+A      A    P  E   L A   +  +   ++       A   A 
Sbjct: 641 AKEQWMAGKVDEARQILTDAFAANPDSESVWLAAAKLEWENDELERARVLFARARERAP 699


>gi|326318316|ref|YP_004235988.1| hypothetical protein Acav_3522 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375152|gb|ADX47421.1| Tetratricopeptide repeat-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 602

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 15/206 (7%)

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           +A+ Q Y  A + + A   + +   +  E      +   A        GD   +   A +
Sbjct: 173 QAIPQLYGRAPDKAAAAAIVEKALADQLENPAAGPLAWTALGRMRLAAGDRKGALEAARK 232

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVG 309
           +L        A++ + + L+   +     ++   +    P PEI   Y    L  +    
Sbjct: 233 ALAQEPTLDAAALLSLQ-LMEAGEADAEPLVARYMGGGKPQPEIRMAYAGVLLNLQRYSE 291

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-------APRKE--- 359
              +   L     +  E+ ++ + +AL+   + ++ A      ++        PRK    
Sbjct: 292 AGTQVDLLTREAPDMAEAWLLKATLALQSDRLQESEAALEQFERLLQSYPPADPRKAAIG 351

Query: 360 -IFLLLAQIEQANSHNTDKILYWTQS 384
             +LL +QI +    +  +   W   
Sbjct: 352 QAYLLRSQIAEK-RGDLAQAEAWLGK 376



 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 56/205 (27%), Gaps = 16/205 (7%)

Query: 103 ARKMHSYVSQQHTFHN-EYLVYLLEVQIALAE-----RQYNIAHEKLEMMLQI----PAT 152
           A K       +      E    LL  Q   A       + +     +  +          
Sbjct: 361 AEKRGDLAQAEAWLGKIENSAELLAAQTRRASLLARQGKLDEGIALIRRLPARNPLEERQ 420

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           +  A   L  ++ +      A     KA+ ++P+   +          A + +     L 
Sbjct: 421 KLVAEAQLLRDAKQ---YQKAFEVQGKAVAMAPEDYDLAYDQAMLAEKAGDLAGMERLLR 477

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           Q  +   +++     L  + +        +  +     ++L         +         
Sbjct: 478 QIIEKRPDYHHAYNALGYSLA---ERGIRLQEARQLIQKALTYAPKDPFITDSLGWVEFR 534

Query: 273 QNKKRKAEVILEKIWKVNPHPEIAN 297
                +A  +L   ++  P PEIA 
Sbjct: 535 LGNHAEAARLLGDAFQRQPDPEIAA 559


>gi|82777923|ref|YP_404272.1| hypothetical protein SDY_2738 [Shigella dysenteriae Sd197]
 gi|81242071|gb|ABB62781.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 638

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNEYL---VYLLEVQIALAERQYNIAHEKL 143
           L   ++     + P A    +   ++ H  +         L+       + QY  A E  
Sbjct: 519 LALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDF 578

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                   ++    Y L   + R G+ ++   +  ++L   P    V
Sbjct: 579 WRAAWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEV 625


>gi|197098400|ref|NP_001126143.1| dnaJ homolog subfamily C member 7 [Pongo abelii]
 gi|75061769|sp|Q5R8D8|DNJC7_PONAB RecName: Full=DnaJ homolog subfamily C member 7
 gi|55730501|emb|CAH91972.1| hypothetical protein [Pongo abelii]
          Length = 494

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180
            +L+ +      +Y  A      +L++ +T      V  L         +  A ++  +A
Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236

Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           L ++PD      A                      +  A     +         +  A L
Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R   N+    +  +  D   ++KL D  I A +  A+  +   +  +A    EK+++
Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356

Query: 289 VN 290
             
Sbjct: 357 TE 358


>gi|94310190|ref|YP_583400.1| ParB family protein [Cupriavidus metallidurans CH34]
 gi|93354042|gb|ABF08131.1| nuclease ParB (CMGI-2) [Cupriavidus metallidurans CH34]
          Length = 683

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 17/230 (7%)

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            TR   + +   ++C   D   A++   +   +  +     +A+       +E + AI  
Sbjct: 329 ETRLEKIDAELEDACDAEDEAKAEKLEQRRDQVIGELEDAEDALQGYAPEVREVAGAIVT 388

Query: 211 LNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +++  +        R A     R+LE   +G        A +  +  D++  A+  + + 
Sbjct: 389 IDRNGEPVIHRGLLREAEAKALRTLEKLRRGFGSTEGEAANDEHEDADDAPKAASLSDRL 448

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----------LKRALRLE 318
               +  R A + +E     +PH  +A +   ++                  LK   RLE
Sbjct: 449 AQRLSAHRTAALQIEVA--RHPHVALAALVHGMVQTVLQENHYGHDLPLGVSLKLQDRLE 506

Query: 319 EINKESVESLVIVSKIAL---EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
            +  +  ES   V+   L      ++ +  A+   A+    + E+  LLA
Sbjct: 507 GMAPDWPESPAAVALRELQQVAGEALPEDSAELFAALLAKSQDELVRLLA 556


>gi|315051754|ref|XP_003175251.1| heat shock protein STI1 [Arthroderma gypseum CBS 118893]
 gi|311340566|gb|EFQ99768.1| heat shock protein STI1 [Arthroderma gypseum CBS 118893]
          Length = 578

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 56/194 (28%), Gaps = 25/194 (12%)

Query: 94  SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++A     LA  K+ +    +     E L                 A    +  L    T
Sbjct: 315 AVAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            E           R      A+  A K   + P+       +  +     +W  A+    
Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  K A + +R        R+           +  D  E++K     I A +  A++L +
Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470

Query: 273 QNKKRKAEVILEKI 286
             +  K   +  + 
Sbjct: 471 MKEYNKCLDVCTEA 484


>gi|119488020|ref|ZP_01621464.1| hypothetical protein L8106_11502 [Lyngbya sp. PCC 8106]
 gi|119455309|gb|EAW36448.1| hypothetical protein L8106_11502 [Lyngbya sp. PCC 8106]
          Length = 727

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 2/161 (1%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            A+   + A       L++      A  +L     + G L+ A     +AL + PD   V
Sbjct: 62  QAQGLLDAAIRSYTQALELDPNLPQAHTNLGSMFYKQGLLDQAMTCYRQALSLKPDFAEV 121

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +     L K+ + A   + ++K    +     A  L  +  + A  G +  +     
Sbjct: 122 YWNL--AQALRKQGNEAEAQICEQKAVEYQPQLATANFLFNQGNKFAYNGKLDQAMKSWQ 179

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            ++ +  N   A       L  + + ++A    EK  ++ P
Sbjct: 180 NAIAIDPNLAEAYCQIGMILRYRGEPKQALSYFEKALELQP 220


>gi|260061693|ref|YP_003194773.1| TPR domain-containing protein [Robiginitalea biformata HTCC2501]
 gi|88785825|gb|EAR16994.1| TPR domain protein [Robiginitalea biformata HTCC2501]
          Length = 456

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 52/144 (36%), Gaps = 11/144 (7%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            +  E  L +  +    +Y       + GD   A     KA  +  +A   ++ + +   
Sbjct: 282 RKLFEAQLALEPSASAYLYG-GTLKAKDGDNQGAIADFDKAAGLETNAKKKSDILYKAAT 340

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA--RSLENADKGDMI--------ASYHDA 249
           +A+++S++      +K         +A LLIA   +    D G            +   A
Sbjct: 341 IARKFSKSQARSYAQKAINAYGANGKAYLLIANLYASSANDCGSTTFEKRAIYWKAADLA 400

Query: 250 IESLKLCDNSIMASICAAKSLISQ 273
            ++ ++  +    +  AA S  ++
Sbjct: 401 RQAARVDPSLSSTAKQAAASYSAK 424


>gi|328722692|ref|XP_003247641.1| PREDICTED: tetratricopeptide repeat protein 12-like [Acyrthosiphon
           pisum]
          Length = 229

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               + +A+ + NQ      +  ++  +L   R+L   + G M     D   +L L D S
Sbjct: 125 RKGNYEKALIYFNQAI----DVRKDSCVLFTNRALTKINLGLMDEVVSDCDRALHLNDRS 180

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           + A +  A++L      R AE +LE   K +
Sbjct: 181 LNAVLYKAEALWELGDTRAAEDLLETALKTH 211


>gi|256221671|ref|NP_001157771.1| plectin isoform 1hij [Rattus norvegicus]
 gi|256221739|ref|NP_001157774.1| plectin isoform 1hij [Rattus norvegicus]
 gi|256221753|ref|NP_001157777.1| plectin isoform 1hij [Rattus norvegicus]
          Length = 4387

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1243 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1302

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1303 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1362

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1363 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1400


>gi|221123192|ref|XP_002165795.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 887

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 7/159 (4%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
           + ++ D+  +        K    S    I  A+    Q    KA  +LE+    NP  ++
Sbjct: 663 HEEEKDLYEAQQAYRNGTKKSPTSFQLWILLARLEEKQGNITKARSVLEQARHRNPRVDL 722

Query: 296 ANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
             ++   +   T G  K   +  + +  ++   S  + ++ A+ M +  Q   K++ A+K
Sbjct: 723 --LWLESVRIETRGGNKDFAKSLMAKALQDCPSSGQLWAE-AIFMETRPQRKTKSVDALK 779

Query: 354 I-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                  + L ++++  +     +K   W    +   PD
Sbjct: 780 RCEHDPHVLLAVSKLFWSERK-LNKAREWFNRTVKIDPD 817



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 28/213 (13%)

Query: 107 HSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
              + ++     E    L  ++ Q+   E+    A +      +   T       L    
Sbjct: 638 SKALLKESLSKYEDFPKLWMMKGQLHEEEKDLYEAQQAYRNGTKKSPTSFQLWILLARLE 697

Query: 165 CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKE------------------- 203
            + G++  A+    +A   +P     W+    ++     K+                   
Sbjct: 698 EKQGNITKARSVLEQARHRNPRVDLLWLESVRIETRGGNKDFAKSLMAKALQDCPSSGQL 757

Query: 204 WSRAI---TFLNQKKKNAKEWNR--NRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           W+ AI   T   +K K+     R  +   +L+A S     +  +  +      ++K+  +
Sbjct: 758 WAEAIFMETRPQRKTKSVDALKRCEHDPHVLLAVSKLFWSERKLNKAREWFNRTVKIDPD 817

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              A     K  ++   +   + I+E+  K  P
Sbjct: 818 FGDAWAYFYKFELAHGTEANQKSIMERCVKSEP 850


>gi|119508836|ref|ZP_01627988.1| hypothetical protein N9414_20690 [Nodularia spumigena CCY9414]
 gi|119466365|gb|EAW47250.1| hypothetical protein N9414_20690 [Nodularia spumigena CCY9414]
          Length = 357

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 12/190 (6%)

Query: 106 MHSYVSQQHTFHNEYLV---YLLEVQ-----IALAERQYNIAHEKLEMMLQIPATREFAV 157
           M + +      + + L     L E Q         + Q   A       L I  T+    
Sbjct: 108 MQNRLDLAVAEYKQALTINPKLGEAQYNLGLALHRQGQKEAAIAAYRQALVIDPTKSAGQ 167

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y+L      +G + +A     +A+++          +        +   AI    Q    
Sbjct: 168 YNLGLGLYELGQIQAAIAAYEEAINLDSSNAKAYFNLAIARQEQGQIELAIAAYEQAL-- 225

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             E + N A          A +G    +     ++++    +  A       L +Q + +
Sbjct: 226 --ELDPNNAAAYNNMGSLKAIQGQTSEAIAVYRQAIRQNPQNTSAYYNLGVILYNQGELK 283

Query: 278 KAEVILEKIW 287
           KA  IL++ +
Sbjct: 284 KANGILKRAY 293


>gi|110631441|gb|ABG81066.1| immunoglobulin A1 protease precursor [Neisseria meningitidis]
          Length = 1818

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1163 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1207

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S  
Sbjct: 1208 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1259

Query: 185  --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                A     A  QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1260 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1318

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1319 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1370

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1371 ---SQPQRRKRRAA 1381



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
             R ++K  +A       ++A     A +    ++ +     E        Q A   R++ 
Sbjct: 1078 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1128

Query: 138  IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190
               E  E+  +        R+ A      +  R     + Q Y   A    P       V
Sbjct: 1129 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1183

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             +  V+        ++A   L ++++      R  A LL  +  E   +   +A+   A 
Sbjct: 1184 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1232

Query: 251  --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              E+ +           AA+    Q  +RKA  +
Sbjct: 1233 AEEAKRQ----------AAELAHRQEAERKAAEL 1256


>gi|21594801|gb|AAH31368.1| Tmtc4 protein [Mus musculus]
          Length = 524

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 242 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 297

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 298 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 350


>gi|89900507|ref|YP_522978.1| hypothetical protein Rfer_1718 [Rhodoferax ferrireducens T118]
 gi|89345244|gb|ABD69447.1| Uncharacterized enzyme of heme biosynthesis-like [Rhodoferax
           ferrireducens T118]
          Length = 429

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 47/403 (11%), Positives = 107/403 (26%), Gaps = 48/403 (11%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   + +  +  + +   + V +    ++I W       S  +++ +L  F     +   
Sbjct: 1   MRAALWFLGLFGVAVAMALFVGNNQGTITIFWPPYRVDLSFNLVVLLLALFFLGLHVALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH------ 114
                 + P        +      + AL   L  + A     ARK    V  +       
Sbjct: 61  ALAALFAMPGHARSWRIQHQERAMHVALLDALSHMMAGRFIRARKAAEVVLARESAMTRS 120

Query: 115 ------TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
                 +     L +LL  + A + +      + L   L+  + R+        +  R G
Sbjct: 121 GETLAYSARLRALSHLLAAESAQSLQDKVAREDHLRQSLEQASRRDA-------QETREG 173

Query: 169 DLNSAQRYATKALDISPDAPWVTE-------------AVVQQYVLAKEWSRAITFLNQKK 215
               A R+A +  D      W+ +               +Q   +A++   A+       
Sbjct: 174 VQLRAARWALEDHDAQSALQWLNDLPQGASRRTLALRLRLQAARMARQTQLALETARLLA 233

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSLISQ 273
           K+    +     +L + +L+                 L   +  +      A  + L   
Sbjct: 234 KHRAFSDVAAPGILRSLALDLVLTAYDPDQLQTVWRQLDEAERLMPEVAIEASSRMLKVG 293

Query: 274 NKKRKAEVILEKIWK---VNPH-----------PEIANIYTHLLSENTVGKLKRALRLEE 319
                A   L  +W      P              + + +           L R  + + 
Sbjct: 294 GDIELARNWLLPVWDHMLAQPGALTEAQRISLIRALESSFAMASGAPEAPWLTRIEQAQL 353

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            +        +     + +    +A      A+       +  
Sbjct: 354 ADPADANLQYLAGMTCMRLQLWGKAQQLLQHALPKLQDAGLAR 396


>gi|218767823|ref|YP_002342335.1| IgA1 protease [Neisseria meningitidis Z2491]
 gi|121051831|emb|CAM08137.1| IgA1 protease [Neisseria meningitidis Z2491]
          Length = 1773

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1152 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1196

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S  
Sbjct: 1197 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1248

Query: 185  --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                A     A  QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1249 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1307

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1308 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1359

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1360 ---SQPQRRKRRAA 1370



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
             R ++K  +A       ++A     A +    ++ +     E        Q A   R++ 
Sbjct: 1067 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1117

Query: 138  IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190
               E  E+  +        R+ A      +  R     + Q Y   A    P       V
Sbjct: 1118 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1172

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             +  V+        ++A   L ++++      R  A LL  +  E   +   +A+   A 
Sbjct: 1173 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1221

Query: 251  --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              E+ +           AA+    Q  +RKA  +
Sbjct: 1222 AEEAKRQ----------AAELAHRQEAERKAAEL 1245


>gi|326473191|gb|EGD97200.1| heat shock protein [Trichophyton tonsurans CBS 112818]
          Length = 582

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%)

Query: 94  SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +IA     LA  K+ +    +     E L                 A    +  L    T
Sbjct: 315 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            E           R      A+  A K   + P+       +  +     +W  A+    
Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  K A + +R        R+           +  D  E++K     I A +  A++L +
Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470

Query: 273 QNKKRKAEVILEKI 286
             +  K   +  + 
Sbjct: 471 MKEYNKCLDVCTEA 484


>gi|317403788|gb|EFV84268.1| hypothetical protein HMPREF0005_03694 [Achromobacter xylosoxidans
           C54]
          Length = 1135

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 11/139 (7%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A ++          +   A+  L L      + I  A  L    +  +A  +  +  ++ 
Sbjct: 594 ALAVSLFSTFRSPEALQPALTMLDLAPADSQSHIVLAAILAQLGRTSEAIAVGRRAVELG 653

Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESLVIVSKIALEMGSIDQ 343
           P     H  +A+                A  L  I    +  ++ + + K  ++ G +  
Sbjct: 654 PRNAEAHAILADALAAERRHKEAQ----ASNLTAIALDPKQRKARINLCKAYIDAGEVSL 709

Query: 344 AHAKAMLAMKIAPRKEIFL 362
           A   A  A+ I P   I  
Sbjct: 710 AEQAAREAVAIFPTDAIVR 728


>gi|224130012|ref|XP_002320730.1| predicted protein [Populus trichocarpa]
 gi|222861503|gb|EEE99045.1| predicted protein [Populus trichocarpa]
          Length = 407

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAV------YSLYFES-CRIGDLNSAQRYATKALDISPD 186
               +A E  E +      +          Y     +  R G     +    +       
Sbjct: 217 GNLTLAEETFEEL------KLLGQPLDRRSYGSMIMAYIRAGMPEKGEMILREMDAQEIR 270

Query: 187 A-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLENADKGDMIA 244
           A   V +A+++ Y +  +   A    +  +       +R  A+LL A  +    +     
Sbjct: 271 AGSEVYKALLRAYSIIGDADGAQRVFDAIQLAGIPPDDRTCAVLLNAYGMAGQSQNAYAT 330

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             +     ++  D  + A + AA     +NK  +A   L
Sbjct: 331 FENMWRAGIEPTDRCV-ALVLAA--YEKENKLNQALDFL 366


>gi|188579255|ref|YP_001916184.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523707|gb|ACD61652.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 898

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 5/85 (5%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R RA L   R L+   +     +     E+LKL  +  +A+         Q +  ++  
Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRADFALAANNLGFVYFRQGRFAESAR 841

Query: 282 ILEKIWKVNPHPE-----IANIYTH 301
            LE   K++P        + + Y  
Sbjct: 842 WLETTLKIDPSRAVAYLNLGDAYAE 866


>gi|171913224|ref|ZP_02928694.1| hypothetical protein VspiD_18630 [Verrucomicrobium spinosum DSM
           4136]
          Length = 1447

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 76/208 (36%), Gaps = 11/208 (5%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +   +A++  P  P V + ++  +      + A+ +L +      +  R   +L   R
Sbjct: 335 ALQVLREAMEALPGTPQVEQRLLDLWEKEGTDAAALQWLEKLMAAHPD--RQDLLLRQVR 392

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
            L   + G         + S     + +  S+  ++ L  +N+ + A ++LE     +P 
Sbjct: 393 WLFANNLGPRAHEAFKTLLSRLEMADQVGRSVELSRWLRRRNQLQDAGLLLETALGKSPD 452

Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                 E+  +Y      + V  L      + +  +   + + +++  +       A   
Sbjct: 453 RWDLRRELGELYFTQRRTDEVAALFEGDWTKTLTPD---ARLEIAQFLMSKQLWVNAKKL 509

Query: 348 AMLAMKIAPRK-EIFLLLAQIEQANSHN 374
               +   P   E  LLLA+IE+    +
Sbjct: 510 VEPWLVAQPTAFEGHLLLAKIEEKLGDD 537


>gi|163733535|ref|ZP_02140978.1| TPR domain protein [Roseobacter litoralis Och 149]
 gi|161393323|gb|EDQ17649.1| TPR domain protein [Roseobacter litoralis Och 149]
          Length = 270

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 32/108 (29%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
             N A    +  LQ    R      L     R      A     K  ++       +   
Sbjct: 39  DPNEAISYYQRTLQSSPDRIDLRRGLAASFVRAKRFTEAASAWEKVTELKDSTSEDSVNY 98

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
               + + +W +A   L+      + + R R   ++A + E   K D 
Sbjct: 99  ADALIRSGDWDKAEKVLDTVPPTYETFKRYRLEAMMADANEEWKKADS 146


>gi|42524506|ref|NP_969886.1| hypothetical protein Bd3119 [Bdellovibrio bacteriovorus HD100]
 gi|39576715|emb|CAE80879.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
           bacteriovorus HD100]
          Length = 590

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 44/155 (28%), Gaps = 14/155 (9%)

Query: 146 MLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVT---EAVV---Q 196
           + Q    +      L  ++ R   +G    +     +A  +             V+    
Sbjct: 182 LSQKDKNKSLGYEELMSQALRYKSLGLYERSLESYQRASKLKEPDAEAQVQMATVLISED 241

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           +  L          L +                +  ++     GD+  +     +++   
Sbjct: 242 RQSLMG-----RRILERALVQENRSRSEIVDAYLGIAVSYMMDGDLKQAEDTLQKAIGHE 296

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +I A +  A   + +    +A    + I++ NP
Sbjct: 297 PFNISALLNLAIIQLKKGNYGEAMRDFDAIYRKNP 331


>gi|116620339|ref|YP_822495.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223501|gb|ABJ82210.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 761

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 57/180 (31%), Gaps = 6/180 (3%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           +     +  V        + + +Y  A   L  +          +  L           +
Sbjct: 468 ERLIPGDAEVQFQLATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPA 527

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     + L+  P+A  V E + +  + +  +  AI    +      +  R    L +  
Sbjct: 528 ALAMLQEELNRHPEADSVRELLGETSLESGHYDVAIEQAGRLLSKYPDSAR----LHLLV 583

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291
                 KGD+  +      +  L  +   A++ A A +   Q +  +A      + K+NP
Sbjct: 584 GKAYFRKGDLAGATRAYQRASVLRPS-DPAAVNALASTYAVQGQASQAMEAYRHVLKLNP 642



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 22/282 (7%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +A+   L+        LA     +             +    +   A      A E  E 
Sbjct: 340 RAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEA 399

Query: 146 MLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +             +L   S   G+     RYA + L I+P    V   +++   L    
Sbjct: 400 VRLRAD--FIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVH--LLRSMALMG-- 453

Query: 205 SRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              +    + +   +   R     A +    +     +G    +                
Sbjct: 454 ---LDRSGEAQSELRLLERLIPGDAEVQFQLATTKVKQGKYREAEGLLRSLNSKAPGDAR 510

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG------KLKRAL 315
                A +L +QN++  A  +L++  ++N HPE A+    LL E ++        +++A 
Sbjct: 511 ILRELAGALTAQNQQPAALAMLQE--ELNRHPE-ADSVRELLGETSLESGHYDVAIEQAG 567

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           RL     +S    ++V K     G +  A      A  + P 
Sbjct: 568 RLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPS 609


>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657 [Trichodesmium erythraeum IMS101]
 gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 594

 Score = 39.9 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 23/163 (14%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDI 183
            Q    + + + A    +  L I       V+    +  E  +  D   A     +A+ +
Sbjct: 424 GQAFFMQGKLDEAIHAYKKALGIAP-NFTIVHNKLGVALEQQKKEDEAVAAY--KEAISL 480

Query: 184 SPDAPWVTEAVVQQYVLAKE--------WSRAITFLNQKKKNAKEWN------RNRAILL 229
            P+      A +   +L ++          +A      + ++ +         +  +   
Sbjct: 481 DPNFA-TARANLGYALLKQDRTTDGIANLKKARDLFQTQNQDKEASKIDNFLCKRESESH 539

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSL 270
             +  + + +G    +  +  E+++L  +   A  S+ AAK+L
Sbjct: 540 YRKGEKLSKQGKYQEAIAEYEEAIRLDPSHEDARQSLTAAKAL 582


>gi|254422317|ref|ZP_05036035.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196189806|gb|EDX84770.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 987

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 22/180 (12%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI-----------ASY 246
             + ++   A  +LN+    ++   R  AI    R+L+                    ++
Sbjct: 785 QAIEQDPIDARVWLNKGMTLSRLRKREEAIAAFDRALDINPDYHEAWVNRGVAFGILQAH 844

Query: 247 HDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNPHPEIANI---- 298
             A ES  +          A      +L    +  +A    EK  + N  P++A      
Sbjct: 845 DKAFESFDMAVTLQANDAVAWLNRGLALTELERYEEAVASFEKATRFN--PKLAKAWDNR 902

Query: 299 -YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            Y  +     +  LK   +   +N    ++    +         D A      A+++ P 
Sbjct: 903 GYVLMRLGRDLDALKSFDKAIAVNPNYAKAYYNRALCYALQRDNDLALENLQQAVRLEPS 962


>gi|119478052|ref|ZP_01618131.1| TPR repeat protein [marine gamma proteobacterium HTCC2143]
 gi|119448758|gb|EAW30001.1| TPR repeat protein [marine gamma proteobacterium HTCC2143]
          Length = 899

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 14/197 (7%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA 151
           + IAA N   A ++   +       +  L   L+ ++   ++Q+  A   L+      P 
Sbjct: 689 IEIAAGNYSEALQVTEQIRA--LVPDSPLADYLKGRVYATQQQWPEAIADLQLAWQIQPN 746

Query: 152 TREFA-VYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 +Y     +    D  + AQ +  +   + P +P        Q         AI 
Sbjct: 747 NSIAGALYG----ALTANDNTDKAQLFVDEWQRLIPQSPNPLIIKATQQQQQGNAIAAIE 802

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +    +     N AI L   +    + G+   +   A ++ +L  NS          
Sbjct: 803 LYEKAIGLSP----NNAIALNNLAWLYFENGNS-KARELAEKAYQLAPNSAGILDTYGWI 857

Query: 270 LISQNKKRKAEVILEKI 286
           L+++    +   +L+K 
Sbjct: 858 LVNEGSVAEGIELLQKA 874



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 19/215 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MM 146
           L    + +   +I  A+K  S +   +  ++E L   L  Q A  E   + A   L   +
Sbjct: 191 LSLARIDLITGDIASAKKSLSQLLVNNGQNSELLH--LRAQAAYIENNLDDAERFLTDAL 248

Query: 147 LQIPATREFA------VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV- 199
             +P T          +  L     + G  + A  Y     + +P+     + + Q    
Sbjct: 249 SYLPQTDIITPMKTRVLQQLSETLTQQGRTSEAMIYTRLLAEANPEGHQAKQTLNQAMSL 308

Query: 200 -LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             A +  +A   L +  +       +  +L     + N  +GDM  +     +++     
Sbjct: 309 YQAGDLDQAEQLLLKLYEQYPNNTVSGMML----GMINYQQGDMTKAGELLEQNI--DPE 362

Query: 259 SIMASIC--AAKSLISQNKKRKAEVILEKIWKVNP 291
              +++   AA + +   +  KA  +L+   K  P
Sbjct: 363 IASSNVISSAAMAQLRLGQSDKAIALLQAALKTQP 397



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 19/207 (9%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  +     D+  A+    KAL+IS D   +   +V   + A  +S A+    Q    
Sbjct: 650 RGLSRQLAAADDMTQAKSALLKALNISSDNTSLLTDLVTIEIAAGNYSEALQVTEQ---- 705

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHD--AIESLKLCDNSIMASICAAKSLIS--Q 273
                  RA++  +   +               AI  L+L       +  A     +   
Sbjct: 706 ------IRALVPDSPLADYLKGRVYATQQQWPEAIADLQLAWQIQPNNSIAGALYGALTA 759

Query: 274 NKKRKAEVILEKIWK----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           N       +    W+     +P+P I          N +  ++   +   ++  +  +L 
Sbjct: 760 NDNTDKAQLFVDEWQRLIPQSPNPLIIKATQQQQQGNAIAAIELYEKAIGLSPNNAIALN 819

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
            ++ +  E G+  +A   A  A ++AP
Sbjct: 820 NLAWLYFENGN-SKARELAEKAYQLAP 845


>gi|37520953|ref|NP_924330.1| hypothetical protein gll1384 [Gloeobacter violaceus PCC 7421]
 gi|35211948|dbj|BAC89325.1| gll1384 [Gloeobacter violaceus PCC 7421]
          Length = 631

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 41/141 (29%), Gaps = 7/141 (4%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A     R  +   +  +  +      +++L    + A       L SQ + + A  
Sbjct: 16  TVEDARTACGRGEQLRKQNQLTEAIGCFRRAVRLEPGLVEAHFGLGVVLASQGQLQAAAA 75

Query: 282 ILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             E+  ++   P+ A         +              +   I  +   + + +  + +
Sbjct: 76  SFEQALRLQ--PDFAEASFQLAVAYARLGAPGRAAAAFQQTLAIRHDHTGAHLELGHLLM 133

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
             G   +A      A+ I P 
Sbjct: 134 AQGDWQRAAGCYRQALAIDPD 154



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 8/155 (5%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            +   R         +  +   L  A     +A+ + P        +        +   A
Sbjct: 16  TVEDARTACGRG--EQLRKQNQLTEAIGCFRRAVRLEPGLVEAHFGLGVVLASQGQLQAA 73

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
                Q  +   ++    A      ++  A  G    +     ++L +  +   A +   
Sbjct: 74  AASFEQALRLQPDF----AEASFQLAVAYARLGAPGRAAAAFQQTLAIRHDHTGAHLELG 129

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             L++Q   ++A     +   ++  P++A  +  L
Sbjct: 130 HLLMAQGDWQRAAGCYRQALAID--PDLATAHFRL 162


>gi|296123820|ref|YP_003631598.1| hypothetical protein Plim_3586 [Planctomyces limnophilus DSM 3776]
 gi|296016160|gb|ADG69399.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
           DSM 3776]
          Length = 1077

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 45/299 (15%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAE 133
             +    +   AL  GL    A     A  +      +    +  +   L  Q   A A 
Sbjct: 549 FPQATQRRRAYAL-QGLAYAKAQQWAKAEAVIKQFEAE-FPGDPAVAAALMDQAEVAEAA 606

Query: 134 RQYNIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           +Q+ +A    E + ++ A      FA     +   R+GD   A     +     P  P  
Sbjct: 607 KQWPVALADFEKLKRLAAGTTNEPFAWRGTGWSRFRLGDYKLAAEEFAQLSAKFPQHPLQ 666

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            EA+   Y   + W  A                 +A+ +  ++ +     D  +   +  
Sbjct: 667 AEAM---YYEGESWLLAKET-------------EKALKVFQQAFDRFTPKDAASVKEELK 710

Query: 251 ESLKLCDNSI--MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT- 307
                        + +  A++L    +  +A+   E + K  P    A ++  LL+E   
Sbjct: 711 -----APVLFGYRSGLMMARTLEQTGRLEQADQAYETLLKKFPK---AEVFDQLLNEWAL 762

Query: 308 ----VGKLKRALRL-EEINKESVESLVI------VSKIALEMGSIDQAHAKAMLAMKIA 355
                G+ ++A ++   +  E  ES +       +++  L  G   +A       ++  
Sbjct: 763 INYEAGRFEQADKIFARLVAECPESPLADNAKLSLAESDLIQGEFARARKSLEELLESE 821


>gi|291393188|ref|XP_002713058.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 4
           [Oryctolagus cuniculus]
          Length = 742

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 8/123 (6%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           V++    + EW                     A +        ADKG+  A+     E++
Sbjct: 455 VLRCVTRSSEWRSEDQLFGSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 510

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR
Sbjct: 511 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 566

Query: 314 ALR 316
              
Sbjct: 567 FEA 569


>gi|290488982|gb|ADD30875.1| putative RF3 protein [Plumbago auriculata]
          Length = 171

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 10/108 (9%)

Query: 117 HNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSA 173
             E   Y  +   A +E  Y  A     E M     P  R + +Y++       GD   A
Sbjct: 32  EKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKA 91

Query: 174 QRYATKALDISPDAPWVTE--AVV-----QQYVLAKEWSRAITFLNQK 214
             Y  +AL+ +P  P      AV+     +Q +   +   A  + +Q 
Sbjct: 92  LEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQA 139


>gi|224370267|ref|YP_002604431.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2]
 gi|223692984|gb|ACN16267.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2]
          Length = 489

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 4/139 (2%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L++ ++A    Q +     L  ML+         Y L     R   L+ A  +  +AL 
Sbjct: 266 NLVKYRLAGLYGQVDTTEAMLSKMLKKDPDDAAIHYGLALVLVRKSLLDQALSHLGQALT 325

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +    P+V   + + Y+L  E  +A+  L             R+ LL  R     D G +
Sbjct: 326 LRLFDPFVLVEMGRVYLLKGEPEKALAVLEG----LDTVADVRSSLLFYRGSARLDLGML 381

Query: 243 IASYHDAIESLKLCDNSIM 261
             +  D +  +    +   
Sbjct: 382 DKAKSDLLRLVDADPDLFP 400


>gi|254465675|ref|ZP_05079086.1| TPR/sulfotransferase domain protein [Rhodobacterales bacterium Y4I]
 gi|206686583|gb|EDZ47065.1| TPR/sulfotransferase domain protein [Rhodobacterales bacterium Y4I]
          Length = 582

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 75/226 (33%), Gaps = 16/226 (7%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A  Y  KAL ++P      + + Q  +  ++   A+  L +  K+           L  +
Sbjct: 56  AVPYFKKALALAPGFHDARKNLAQTLLFLQQGEPAMKLLERVLKDQP----GDQAALYLQ 111

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +  +       A+   A  +L             A +  +   ++      +   KVNP+
Sbjct: 112 AQAHLVMNAPEAAIETATAALDRDPRQPRMLRLRATAWNTLGDEKATLADYQAALKVNPN 171

Query: 293 PEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
              A     LL    + +L R       A +   +  ++ E+   ++   +  G    A 
Sbjct: 172 DADALQNASLL----LARLMRQDEATEAAEKAVAVAPQNAEARRRLASQLISNGETAAAR 227

Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
            + +  M++ P   ++  +LA+I     +     +        A  
Sbjct: 228 EQCLALMELDPKDTQVLEMLARISNREQNAELLPIAQKALKSAAPR 273


>gi|254439763|ref|ZP_05053257.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus
           307]
 gi|198255209|gb|EDY79523.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus
           307]
          Length = 551

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 90/319 (28%), Gaps = 86/319 (26%)

Query: 125 LEVQIALAERQYNIAHEKLE----------MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
           L  + A     Y  A                +++   T    V          G + SA 
Sbjct: 13  LAARQAAISGDYAAAAIYFRDALLADANNTALMEQSLTAFLGV----------GQVESAA 62

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIA-- 231
             A   ++   ++     A++ Q   A++W      L    +     +   +A   +   
Sbjct: 63  GIARPFINAGGESQIANIALMAQAARAQDWDTIFDLLEAGHEVGPLLDGLVQAWAYLGNG 122

Query: 232 ---RSLENADK----------GDMIASYHDAIE-------SLKLCD---NSIM--ASICA 266
               ++   D+          G    +   A+        ++         +   AS+ A
Sbjct: 123 DKDGAMMRFDEVVDTPGLRGFGQQHKALALAMSGDLGGANAIYDLPPNIGIVPTRASVVA 182

Query: 267 -AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR------------ 313
             + L    +  +A  I+E+ +  +P PE+  + + +++      L R            
Sbjct: 183 HLQILAQLGEFERAGDIIERAFGEDPDPELVALRSAIMAGAVPD-LSRVVATPSDGIAYA 241

Query: 314 --------------------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                               A     I     ++ +  +++   +G  D A       + 
Sbjct: 242 YKGLSEILQGEANESYLLLYAQAARFIAPHDADAQIATARLQNALGQYDAAAQTFAQVVT 301

Query: 354 IAPRKEIFLLLAQIEQANS 372
             P        A+I +A S
Sbjct: 302 DDPAFHS----AEIGRAES 316


>gi|187775826|ref|ZP_02798537.2| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188024725|ref|ZP_02773408.2| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189009920|ref|ZP_02803528.2| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|208812629|ref|ZP_03253958.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819854|ref|ZP_03260174.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|187770658|gb|EDU34502.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017138|gb|EDU55260.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189003159|gb|EDU72145.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|208733906|gb|EDZ82593.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739977|gb|EDZ87659.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|320188889|gb|EFW63548.1| hypothetical protein ECoD_03882 [Escherichia coli O157:H7 str.
           EC1212]
          Length = 1068

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 607


>gi|21240988|ref|NP_640570.1| porphyrin biosynthesis protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21106275|gb|AAM35106.1| porphyrin biosynthesis protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 421

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 107/361 (29%), Gaps = 31/361 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   Y  +    L IL   L    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K   +KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYFE----SCRIGDLNS 172
            L     V++A A      A    + + +   T          L  +    +    D  +
Sbjct: 120 ALAS--AVRVADARGDDAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINAVDSAN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +   A                   A   L   ++ A       + L    
Sbjct: 178 AQPLPARGLLLRTHA----------LAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATL 227

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291
           + +   +     +  +  E+L     +  A + A A+     +    A   LE       
Sbjct: 228 AEQTLLQASDANALAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEHALDAQW 287

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +Y  L  E    +   A R      +S   L+ ++++A +     QA      A
Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARQQQQWSQAEEFLHRA 347

Query: 352 M 352
           +
Sbjct: 348 I 348


>gi|319442373|ref|ZP_07991529.1| serine/threonine protein kinase, bacterial [Corynebacterium
           variabile DSM 44702]
          Length = 815

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 46/241 (19%)

Query: 164 SCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           +   GD  +AQRY    L+I P   AP +  A   + +L ++    I  L+         
Sbjct: 557 ALLTGDFVAAQRYFNTVLNILPGEPAPKLALAATDELLLQEQGVNTIGLLDAGI------ 610

Query: 222 NRNRAILLIARSLENADK-----------GDMIASYHDAIESLKLC----DNSIMASICA 266
            R  A+ L  +   N D+            D +A    A+    L       ++ ++   
Sbjct: 611 -RRSAMALTYQQGLNLDEVAVVPGWTHLTQDPVALRFHALRLYGLVWSTNPTTVSSAFGM 669

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTHLLSENTVGKLKRALR----L 317
           A+ L ++     A   L+K+   + H EIA      ++    ++ +  +++RA R    L
Sbjct: 670 ARQLQAEGMVDPAVATLDKVPANSRHHEIARMTTVLMFITDRADLSESRIRRAGRRLDLL 729

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--------RKEIFLLLAQIEQ 369
                   +  + V   AL+     +   +A   + I P         +      A +E+
Sbjct: 730 PTTEPRIPQLRIAVLSAALD---WLRDSEEAGSPVHIGPGQLFDVDFTERGLR--AGLER 784

Query: 370 A 370
            
Sbjct: 785 G 785


>gi|303237007|ref|ZP_07323579.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
 gi|302482787|gb|EFL45810.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
          Length = 294

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-IAPRKEIFLL 363
            + V  +  A +   +N++  ++ ++  +  L M  +++A   A   ++     +++ LL
Sbjct: 142 GDDVNTIAMATKAISLNEKYGDAYLLRGETHLRMEQLEEATTDADWLVEHTDNNEDVLLL 201

Query: 364 LAQIEQANSHNTDKILYWTQSALHAMP 390
            A+IE+A + N + I  W   A+ A P
Sbjct: 202 KARIERAATRNDESI-AWFTKAIDANP 227


>gi|302652782|ref|XP_003018233.1| hypothetical protein TRV_07754 [Trichophyton verrucosum HKI 0517]
 gi|291181854|gb|EFE37588.1| hypothetical protein TRV_07754 [Trichophyton verrucosum HKI 0517]
          Length = 578

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%)

Query: 94  SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +IA     LA  K+ +    +     E L                 A    +  L    T
Sbjct: 315 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            E           R      A+  A K   + P+       +  +     +W  A+    
Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           +  K A + +R        R+           +  D  E++K     I A +  A++L +
Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470

Query: 273 QNKKRKAEVILEKI 286
             +  K   +  + 
Sbjct: 471 MKEYNKCLDVCTEA 484


>gi|218509623|ref|ZP_03507501.1| probable O-linked GlcNAc transferase protein [Rhizobium etli Brasil
           5]
          Length = 316

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q   A   ++ A +     L     R +    L ++     D   A    +KA+ ++P
Sbjct: 179 AGQDDQAFNDFDRAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 231

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++P         Y+   +   A    N    +A E N N A     ++L    +GD   +
Sbjct: 232 NSPEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 287

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQN 274
                 ++ L      A    A+   S  
Sbjct: 288 ARSYRHAVGLDPKYQPARDGLARVGASAG 316


>gi|242281120|ref|YP_002993249.1| hypothetical protein Desal_3664 [Desulfovibrio salexigens DSM 2638]
 gi|242124014|gb|ACS81710.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 583

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 86/279 (30%), Gaps = 33/279 (11%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATR---------EFAVYSLYFESCRIGDLNSAQRYA 177
            +I L + ++  A + L+++ +   T             +  L  ++ R           
Sbjct: 175 ARIYLEQNKFAQALDILKVIPKDKRTAQIHYLHAKSSAGL-GLTRQAIRS---------L 224

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            KA+++ PD       +   + L K++  A     +  +     N  R  L+        
Sbjct: 225 RKAVEVKPDFIEAWGELAYMHELEKDYDSAEQIYTKMLEFPDVSNHIRLRLMEL----CL 280

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIA 296
              +   +   AIE  +       A +  A  L    K      IL  ++      P+  
Sbjct: 281 KLNNPERALKLAIEGPRSK-----AFLLEAAQLFISGKFYGQASILLDLFAQQKSIPDSY 335

Query: 297 NIY-THLLSENTVGKLKRALRLEEINK---ESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +   +  E      K    L +I+        SL   + + +++    +A     +  
Sbjct: 336 YFFKASIAFEGEDDPGKALGYLNKISPQSEHYDRSLQFRAHLLMDLKRNKEALEIIRIGE 395

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +  P +  F LL     + + ++             +P 
Sbjct: 396 EKFPEEANFYLLEAGLHSEAGDSKAAKDALLRGNTNIPG 434


>gi|167582750|ref|ZP_02375624.1| TPR domain protein [Burkholderia thailandensis TXDOH]
          Length = 781

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 6/144 (4%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFES 164
            S         ++ +  +L V +    ++   A  +   ++++      A     L   +
Sbjct: 235 ASASRALELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHA 294

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R      A     +A++++P+A      +    +       AI  L +  +     +  
Sbjct: 295 QRR--YEEAVAVCRRAVELAPNAAPANGTLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVT 352

Query: 225 RAILLIARSLENADKGDMIASYHD 248
            + +L   +L + D  D      +
Sbjct: 353 HSAMLF--ALVHDDAVDPAQLLEE 374


>gi|145542869|ref|XP_001457121.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424936|emb|CAK89724.1| unnamed protein product [Paramecium tetraurelia]
          Length = 846

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 4/143 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + + + A +     L+       A+  L     +    N A     K   I P+ P +  
Sbjct: 83  QNKLDKAKKYFLTSLEKQPNHALALNELASLMIKEKQYNEALLNLEKGFQIDPNIPDLNY 142

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +       K  + AI + +   K       N+    ++++   +D      +      +
Sbjct: 143 GLGYVLARLKRKTEAIQYFDMAIKQDP----NQKHFYVSKATTLSDLKQFDKALEAVQIA 198

Query: 253 LKLCDNSIMASICAAKSLISQNK 275
           LK+    I      A     Q +
Sbjct: 199 LKIDPQYIDGYQVLAYIYRHQKQ 221


>gi|157112300|ref|XP_001657484.1| smile protein [Aedes aegypti]
 gi|108883757|gb|EAT47982.1| smile protein [Aedes aegypti]
          Length = 707

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 19/234 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--- 190
            +   A E  E  L   +T     Y+L       G  + A  Y  KAL+  P+       
Sbjct: 250 NRTKEAQEVYERALLYDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN 309

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           +  ++Q+    +    A   L  K     E N     +     +   D  +   + +   
Sbjct: 310 SAILLQELGRPELRKIARERL-LKLLAKDESNER---VHFNLGMLAMDDRNTDEAENWFR 365

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYT-HL 302
            ++ L  +   A    A  L   ++  +A   L +   V  HP+       + +IY  ++
Sbjct: 366 RAVHLKQDFRSALFNLALLLADDHRPLEAAPFLNQ--LVKYHPDHIKGLILLGDIYINNI 423

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +         R+ +++  +++ L  +  + +E G + QA A    A ++AP
Sbjct: 424 KDLDAAENC--YKRILQLDPVNIQGLHNLCVVYVERGKLAQAQACLSHAHQLAP 475


>gi|294643797|ref|ZP_06721595.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294808457|ref|ZP_06767210.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|292640886|gb|EFF59106.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294444385|gb|EFG13099.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 651

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189
           + Y+ A E LE +L++    TR + +      S +  D  +A     KAL++    P  W
Sbjct: 113 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 170

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+V+      +++ A    N+        +   A   I R+L    + ++  +  D 
Sbjct: 171 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 224

Query: 250 IESLKLCDN 258
             +L +  N
Sbjct: 225 DLALDIDPN 233


>gi|213619379|ref|ZP_03373205.1| hypothetical protein SentesTyp_24180 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 307

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 13/162 (8%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +++        R  AV  L  +    G  +     A    +   D   
Sbjct: 83  GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAAGLYDR----AEDMFNQLTDETE 138

Query: 190 ----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIA 244
                 + ++Q Y L  +W +AI    +  K  K+  R   A      +L+     DM  
Sbjct: 139 FRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDMDR 198

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     +      NS   SI   +  +++    KA   L+++
Sbjct: 199 AMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240


>gi|195471794|ref|XP_002088187.1| GE13868 [Drosophila yakuba]
 gi|257096370|sp|B4P0E1|FICD_DROYA RecName: Full=Adenosine monophosphate-protein transferase FICD
           homolog
 gi|194174288|gb|EDW87899.1| GE13868 [Drosophila yakuba]
          Length = 495

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 11/140 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY-SLYFES 164
            SY   + T  NE LV L   Q      + + A    E  +   P   E  +    + E 
Sbjct: 108 ASYTKDEQTSINEALVSLRMAQDMYLAGKDDKASRLFEHALALAPRHPEVLLRYGEFLEH 167

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +   + + Q Y   AL ISP                +  +  +  L++++  + +  R 
Sbjct: 168 SQRNIVLADQYYFQ-ALTISPSNSEA-------LANRQRTADVVQTLDERRLQSLDSKR- 218

Query: 225 RAILLIARSLENADKGDMIA 244
            A+  I  S     +    A
Sbjct: 219 DALSAIHESNGALRRAKKEA 238


>gi|157273540|gb|ABV27439.1| probable soluble lytic transglycosylase [Candidatus
           Chloracidobacterium thermophilum]
          Length = 801

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 75/251 (29%), Gaps = 39/251 (15%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL------YFESCRIGDLNSAQRYAT 178
           L  ++         A    E ++Q P  + FA Y L        +  + G+  + Q    
Sbjct: 95  LRARLLHRTGDLAGARTMYEQVMQRPGGQMFAPYCLKYLAELARQEAQSGNQAACQEEQR 154

Query: 179 KA------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           +           P A    + + + Y  A +  RAI    Q    ++E+     +LL   
Sbjct: 155 RLTELTQRFGAHPAARGARQRLAESYAAAGDLDRAIAVYRQLASQSREYEARLGVLLRRV 214

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR--KAEVILEKIWKVN 290
             E   +           +          A++ AA+ L +Q       A+ ++       
Sbjct: 215 GQEAEAQILFRRLLASGKDD---------AALLAAEQLDAQEDSSLLPAQRLVR------ 259

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINK---ESVESLVIVSKIALEMGSIDQAHAK 347
                A +Y          +      L E      +  E+L  + +      + D+A   
Sbjct: 260 -----ARLYLANRHTEGAKR--HFRALVEHVPPVAQRAEALWSLGRAFFIEENWDEAVRW 312

Query: 348 AMLAMKIAPRK 358
              A +  P  
Sbjct: 313 FDRAHREYPTS 323



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 93/315 (29%), Gaps = 33/315 (10%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT- 152
           +A+     A      +  Q          L+  ++ LA R    A      +++ +P   
Sbjct: 228 LASGKDDAALLAAEQLDAQEDSSLLPAQRLVRARLYLANRHTEGAKRHFRALVEHVPPVA 287

Query: 153 -REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAI 208
            R  A++SL        + + A R+  +A    P +P   +   Q       A  +  A+
Sbjct: 288 QRAEALWSLGRAFFIEENWDEAVRWFDRAHREYPTSPEGEKGYYQAGHALQNAGRYREAV 347

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS---IMASIC 265
                      +        L A        GD  A+      + K        + A   
Sbjct: 348 ARYEAFIAAYPDSEFIGGAHLNAIDALRL-AGDFKAALEWCDRAEKRFPRELVGVTARFQ 406

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHLLSENTVGKLKRALRLE 318
            AK  +SQ   R A  +LE + ++  H             +   L    + +   A+ + 
Sbjct: 407 RAKIFMSQGNWRAALSVLEDMQRLPLHRRGPGSTDASEVTFLRGLCLERLERFAEAIEVY 466

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
               ++  S               Q   + +LA+   P+     L+AQ          + 
Sbjct: 467 LSLPDTRTSY------------YGQQATERLLALAENPKARA--LVAQ--HLERFRQSQT 510

Query: 379 LYWTQSALHAMPDPL 393
                 AL    DP 
Sbjct: 511 KDALHQALRLTLDPQ 525


>gi|149925210|ref|ZP_01913503.1| SPY protein [Plesiocystis pacifica SIR-1]
 gi|149813915|gb|EDM73568.1| SPY protein [Plesiocystis pacifica SIR-1]
          Length = 404

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 87/272 (31%), Gaps = 47/272 (17%)

Query: 134 RQYNIAHEKLEMMLQIPATREF------AVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
            + + A    +  + +  T          +  L  E   + D   A  +   AL + P+ 
Sbjct: 115 GRSDEARAAFDEAIALDDTDALPHAAIGNLVGL-SEGATVADKKRAIDHFQTALKLDPEL 173

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                A+    +  +E+ RA+  +    +     +    +     +  +A  G+   + +
Sbjct: 174 ASAHLALGVVLLDLREYQRAVEAIETADRLKGSVDTAYTL-----AQVHARLGNDEQALN 228

Query: 248 DAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
            A  +L+   N+  +   +  A+ L+   +                              
Sbjct: 229 YAESALEYEANASGVDIRLLYARLLMKAGR------------------------------ 258

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
                 ++  R  ++  ++    + V +  L+MG +D A       +++ P +   L+  
Sbjct: 259 -DADAAEQFERCAKLVPDAPPLRLEVVRGLLDMGMVDAAAVHMDALLEMVPDEGPVLVNH 317

Query: 366 QIEQANSHNTDKILYWTQSALHAMPD--PLWI 395
               A   + +  L    +A  A P+    W+
Sbjct: 318 GRVLAAQGDIEGALGRFAAAREAQPESQAAWV 349


>gi|313651040|gb|EFS15440.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str.
           2457T]
 gi|332754160|gb|EGJ84529.1| tetratricopeptide repeat family protein [Shigella flexneri K-671]
 gi|333016503|gb|EGK35834.1| tetratricopeptide repeat family protein [Shigella flexneri K-304]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 458 ASQALKRAHALNKKPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 517

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R  + ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 518 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 572


>gi|313201112|ref|YP_004039770.1| hypothetical protein MPQ_1373 [Methylovorus sp. MP688]
 gi|312440428|gb|ADQ84534.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
          Length = 697

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 3/185 (1%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 +Y  A    E  L +        ++L      +G    A     +A+ +SPD  
Sbjct: 155 ACQDAGRYAEAERCYEEALTLAPNDAALHFNLGNARRELGKTAQAAASYQRAIALSPDDA 214

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +      +    R  L+  +    AD   +     +
Sbjct: 215 DAHNNLGNALRELGQLPEAIACYQRALALKPDLYHARIHLIHQQQ-HAADWRGLEQQIDE 273

Query: 249 AIESLKLCDNSI--MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               L     +     +  A     +  ++  AE  LE  +           +TH+  EN
Sbjct: 274 VRGWLHSAPTAQISPFAFLAMPGTTAAEQRLCAERWLENRYASLTAQASELAFTHIRHEN 333

Query: 307 TVGKL 311
           T  ++
Sbjct: 334 TPLRV 338


>gi|295085226|emb|CBK66749.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A]
          Length = 651

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189
           + Y+ A E LE +L++    TR + +      S +  D  +A     KAL++    P  W
Sbjct: 113 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 170

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
              A+V+      +++ A    N+        +   A   I R+L    + ++  +  D 
Sbjct: 171 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 224

Query: 250 IESLKLCDN 258
             +L +  N
Sbjct: 225 DLALDIDPN 233


>gi|242222770|ref|XP_002477088.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723568|gb|EED77714.1| predicted protein [Postia placenta Mad-698-R]
          Length = 269

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 32/98 (32%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A   H     +    +  L  L    +A A   +  A E L+ ML        A+
Sbjct: 169 GGYVSAAARHFGAVARDPSADASLKALNSALLASANGDWPAAVEALQQMLAADPENFVAI 228

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
            +L       G +    R   +A+ +SP      E ++
Sbjct: 229 NNLAVAYLSQGRIQEGIRMLEEAIKLSPSTTLQAEPLL 266


>gi|158337863|ref|YP_001519039.1| hypothetical protein AM1_4749 [Acaryochloris marina MBIC11017]
 gi|158308104|gb|ABW29721.1| tetratricopeptide repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 669

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 77/247 (31%), Gaps = 22/247 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + Q  +   Q           + +      A   L  E+ ++       R A ++L    
Sbjct: 400 QAQDLVNSGQSEETASFKAETISVHLGEALAKRGLTTEALQV------LRQAQQSLKADS 453

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI-------LLIARSLENAD 238
            +  V  ++ +  +   +   A   L    +    + +   +       L + +    +D
Sbjct: 454 ISSEVKYSLSKVLMQVGKVWEARQILQTGLQQDHFYLKVANMDTTPAVKLEMLQGQIYSD 513

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--- 295
                 +     ++++L     ++   A ++L  Q +  +A +  +K  ++ PH ++   
Sbjct: 514 LKRDDMALKHYQQAVRLEPKFALSYQAAGEALRRQGQYAQAILAFDKAVQLKPH-DLSVI 572

Query: 296 -----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                    T L        +    RL ++    VE    + K  L       A      
Sbjct: 573 QQFYRGRGLTLLAQGKVNAAITDLERLIQLGSFDVEVAHGLGKALLRNNKPLAAIEHLET 632

Query: 351 AMKIAPR 357
           A  + PR
Sbjct: 633 AYDMNPR 639



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 86/302 (28%), Gaps = 44/302 (14%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-------QIPATREFAVYS 159
            SY  +      +   +LL   + + +     A       L                   
Sbjct: 287 ASYTQRLKLSPTDGPSHLLMGNLLVRKGDAEKAFTHYRKFLGPDSSPTDDAELDTQTYLW 346

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---- 215
           L         L++A +   +   ++P    V   + +     + W +AI    Q +    
Sbjct: 347 LAKAQKNHNRLDAAVKTYEQLATLNPQDAKVLYEMGKVLSQLERWDQAIDVFQQAQDLVN 406

Query: 216 ----KNAKEWNRNRAILLIARSLENA-DKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
               +    +      + +  +L       + +     A +SLK    S       +K L
Sbjct: 407 SGQSEETASFKAETISVHLGEALAKRGLTTEALQVLRQAQQSLKADSISSEVKYSLSKVL 466

Query: 271 ISQNKKRKAEVILEKIWKVNP----------HPEI------ANIYTHLLSENTVGKLKRA 314
           +   K  +A  IL+   + +            P +        IY+ L  ++    LK  
Sbjct: 467 MQVGKVWEARQILQTGLQQDHFYLKVANMDTTPAVKLEMLQGQIYSDLKRDDMA--LKHY 524

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP----------RKEIFLLL 364
            +   +  +   S     +     G   QA      A+++ P          R     LL
Sbjct: 525 QQAVRLEPKFALSYQAAGEALRRQGQYAQAILAFDKAVQLKPHDLSVIQQFYRGRGLTLL 584

Query: 365 AQ 366
           AQ
Sbjct: 585 AQ 586


>gi|119620979|gb|EAX00574.1| intraflagellar transport 172 homolog (Chlamydomonas), isoform CRA_d
            [Homo sapiens]
          Length = 1265

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 29/196 (14%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
             +S+    H    V+L        E ++  A  +       P         ++  +    
Sbjct: 871  ELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIR-AGKPKEAVL----MFVHNQ--- 922

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
            D  +AQR A  A D     P     V+           A+   + +K             
Sbjct: 923  DWEAAQRVAE-AHD-----PDSVAEVLVGQAR-----GALEEKDFQKAEG---------- 961

Query: 229  LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            L+ R+       +         ++L++C + + + + A +    +   +K    +E   +
Sbjct: 962  LLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVE 1021

Query: 289  VNPHPEIANIYTHLLS 304
               H E A  Y+  + 
Sbjct: 1022 QARHWEQAGEYSRAVD 1037


>gi|298530570|ref|ZP_07017972.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509944|gb|EFI33848.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 179

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%)

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A  Y HL   +T G +         + E +E    +++  L+ G    A      A  I 
Sbjct: 100 ALGYAHLDKGDTAGAVDAFKEAIHQHPEQIEGYCDLARAYLKQGQESLARKYLARAEHID 159

Query: 356 PRK 358
              
Sbjct: 160 ASA 162


>gi|239815273|ref|YP_002944183.1| hypotheticalprotein [Variovorax paradoxus S110]
 gi|239801850|gb|ACS18917.1| TPR repeat-containing protein [Variovorax paradoxus S110]
          Length = 740

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 74/263 (28%), Gaps = 41/263 (15%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188
               + A    + +L        ++  L     +    + A  YA  A+ I P       
Sbjct: 21  NGLLDQAEAGYQKILSRAPRHHPSLGMLAILGIQRNRPDEALHYADLAIAIEPRISNTHA 80

Query: 189 -------------WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-----RAILLI 230
                           +A      L  +    +T L    K    + R      RA+ + 
Sbjct: 81  TRGNALHGLKRYEEAAQAYQVALTLNPDGHDVLTNLANAWKRLGRFERAMQCYDRALAMC 140

Query: 231 ARSLE--------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             S++          +KG    +  D    L    + + A     +       +R  E +
Sbjct: 141 PSSIDTRYNRGVALLEKGRHAEALDDFDAVLARSSDDLDA--LCQRIYALCGLQRHQEAL 198

Query: 283 LEKIWKVNPHPEIANIYTH--------LLSENTVGKLKRALRLEEINKESV-ESLVIVSK 333
            E    +  HP  A+ +            S       +R + L   +  +  E   + ++
Sbjct: 199 AESNHAIARHPSSADAWRAHGHVLLGMGNSLQAAQAFERVIDLGGPSSSARGEDHFLAAR 258

Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356
             +     ++A      A+K  P
Sbjct: 259 ALVGGSRHEEAFLHLERALKSDP 281


>gi|156550027|ref|XP_001604755.1| PREDICTED: similar to heat shock protein 70 (hsp70)-interacting
           protein [Nasonia vitripennis]
          Length = 575

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 3/98 (3%)

Query: 125 LEVQIALAERQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALD 182
           L  Q+ +  + +  A     +   + P      V   L  +     ++  A  Y  KA++
Sbjct: 443 LYAQMLVDSQDFARADSYFLKAAKRDPKNATILVYRGLL-QLQWQNNIEKAVEYIRKAIE 501

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           +     +  E +    V       AI+  ++     + 
Sbjct: 502 LDDKCEFAYETLGTIEVQRGNLKDAISLFDKALALGRT 539


>gi|114569602|ref|YP_756282.1| sulfotransferase [Maricaulis maris MCS10]
 gi|114340064|gb|ABI65344.1| sulfotransferase [Maricaulis maris MCS10]
          Length = 536

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 10/155 (6%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             +  A    E  ++    R    Y+L       G  + A     + L++ P       A
Sbjct: 121 GDHASAIGLFEAAVRQDGQRAAYHYNLAASRQFAGAFDLAAAGYERTLELEPGHVKALSA 180

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI--ARSLENADKGDMIASYH---- 247
           VV      +     +  L    K A++ N   A L +  A +    D G    +      
Sbjct: 181 VVGLRRQTEA-DNRLDALESAFK-ARDKNDQEAQLHLGHAIAKTLEDLGRHDEALDWLGR 238

Query: 248 --DAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
               + +++  D  + A + AA +  S+     A 
Sbjct: 239 AKAVVSAVRQYDARVDADLFAAAARTSETSPSPAA 273


>gi|94967477|ref|YP_589525.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549527|gb|ABF39451.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 377

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 66/217 (30%), Gaps = 15/217 (6%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A    P A    E   +     + W      + Q  K+A  +     +L        + +
Sbjct: 20  AQAPDPSAAIAFEQQGKLQEAERTW---REVIKQNPKDAGAFASLGVVL--------SKE 68

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
                +     ++L L  +     +    +   +N    A   L+  +  +P  + A   
Sbjct: 69  QKYQEAAAADRKALTLDPSLPGVQLNLGLAEFKRNNFVAAIPPLKAAYAADPASKQAVTL 128

Query: 300 THLLSENTVGKLKRALRL---EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             L    +    + +  L    + +  ++E   ++++  L   + D A  +        P
Sbjct: 129 LGLSYYGSKQFAEASKYLGIAAKADPANIELHQVLAQSCLSARNYDCALEEFRQISAQNP 188

Query: 357 -RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
               + +L  +      H    I  +  +   +  +P
Sbjct: 189 QSAAVHMLTGEALDGTGHTAAAIEEFKAAVNISPREP 225


>gi|86159752|ref|YP_466537.1| hypothetical protein Adeh_3333 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776263|gb|ABC83100.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 274

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 79/247 (31%), Gaps = 31/247 (12%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  E    G L+ A     KA+++ P +    + +   Y   K +  A+       + 
Sbjct: 18  RGI--ELADRGWLDEAINEFHKAIELDPSSAHAHDNLATVYSEKKRYREALNEYLTALRL 75

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +       L    +           +  +  ++++L  +   A +    +L  Q K  
Sbjct: 76  EPDSATAHYNLACFLATH-----GPDMAIAEYQDAIQLEPDHPDAHLNLGLTLADQGKTE 130

Query: 278 KAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +A   L    ++ P      H E+A +       +    +     +  +   + E+ + +
Sbjct: 131 EAVKELGVAIELEPTDPFPRH-ELAGLLMD--EGDYRAAIAHLKEVVRLEPSNFEAELDL 187

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLL-------LAQIEQANSHNTD 376
                + G   +A      A  + P           ++ L       L  + +A + + D
Sbjct: 188 GICYAQKGFYAEAERAYARAAALKPDDLLLNYDVAALYALWGKPAEALEALRKALAQDAD 247

Query: 377 KILYWTQ 383
           K+  W +
Sbjct: 248 KVRDWLR 254


>gi|325116407|emb|CBZ51960.1| putative TPR Domain containing protein [Neospora caninum Liverpool]
          Length = 1081

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 85/253 (33%), Gaps = 28/253 (11%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A E  E  L         +  +     +      A  YA+ +L   P+   +   +V 
Sbjct: 525 RGAVEAFERALHAKPGDRKLIRRIVAALVKTHQYERASTYASNSLREQPEDLELRLDLVA 584

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAI------------LLIARSLENADKGDMIA 244
                + W  AI   +    +   ++ + ++             L++++   + +GD   
Sbjct: 585 LLFRLRRWQEAIETASVVDGDNTAYDGSFSLGAKVQILLLKVKALLSQTSSYSARGDEAE 644

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299
               A+ +L  C         A K  +  +++       E  W+++     A++Y     
Sbjct: 645 LEDSALRTLHRC-------RVAIKRYLELHQRSAESASGEGAWRIS--RLGADVYCQLGA 695

Query: 300 -THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357
                        +      E++ E   +L+ +S+I L  G +  A        ++ P  
Sbjct: 696 ILERRKGEAEQAAQCFEEARELDSERTSALLALSRIRLRQGHLQAAEEYLSALQRLDPTN 755

Query: 358 KEIFLLLAQIEQA 370
           + + L+ ++I  A
Sbjct: 756 EGVSLIKSEIVAA 768



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 53/187 (28%), Gaps = 17/187 (9%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARSLENA 237
           P        + + ++L  +   A   L     +           +   A   +  +    
Sbjct: 389 PGHGMAKAMMARVHLLQGDTEAARRTLRDALSSRAFSDDLGGTKSSIAAHFCLMLARLEQ 448

Query: 238 DKGDMIASYHDAIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWK-VNPHP 293
             G          ++L    +    +   +  A   + + +  +A   LE+  K   P P
Sbjct: 449 LAGQPAEGLAQLEKALSFDLHLKSTLPYYLIKADLHLQKTEFDEAVSTLEESQKLATPTP 508

Query: 294 E----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           E    I      +      G ++   R         + +  +    ++    ++A   A 
Sbjct: 509 ENFTAIGEALLEVY--EPRGAVEAFERALHAKPGDRKLIRRIVAALVKTHQYERASTYAS 566

Query: 350 LAMKIAP 356
            +++  P
Sbjct: 567 NSLREQP 573


>gi|302829737|ref|XP_002946435.1| hypothetical protein VOLCADRAFT_86720 [Volvox carteri f.
           nagariensis]
 gi|300268181|gb|EFJ52362.1| hypothetical protein VOLCADRAFT_86720 [Volvox carteri f.
           nagariensis]
          Length = 280

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 13/216 (6%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           VY    ++   G+   A+    + L   P    V   +   ++      +A     +  +
Sbjct: 14  VYGAGIQAATRGEYAKAEVIFARMLSEDPSLASVWSNLGNVHMSQGRAKQAFDDYTRAVQ 73

Query: 217 NAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            A +      NRAI L    L+ A +G +  +     E+L  CD++I   +    +  ++
Sbjct: 74  LAPDAPVPYLNRAIALEELGLQLAREGHVEEAGARWREALADCDSAISRDVREFAAWFNK 133

Query: 274 NKKRKAEVILEKIW-----KVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKE 323
                     E          +  P IA              N+ G ++    +   N  
Sbjct: 134 GNVELRLEDYEAALGCFSTAADLAPGIAGYRLRAAQLMYQVGNSEGAVRAVKGVIRKNPN 193

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             E+   ++ +    G +  A  +   A+++  R  
Sbjct: 194 YAEAHTTLAAMLWSQGQLAAAEGQLEAALELGGRWR 229


>gi|288962428|ref|YP_003452723.1| hypothetical protein AZL_d03530 [Azospirillum sp. B510]
 gi|288914694|dbj|BAI76179.1| hypothetical protein AZL_d03530 [Azospirillum sp. B510]
          Length = 1243

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 19/233 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
               + A      ML        A++ L     + G    A R   +A+   P       
Sbjct: 37  AGDLDGAERGYRAMLAAQGGNADALHLLGVLHHQRGLDGEAVRLIGQAVARRPGVAE-QH 95

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDMIASY 246
           A +           A+  L +  + A E+ R  A+         +      ++G +  + 
Sbjct: 96  ANLGL---------ALHALGRLDEAAAEYRRALALRETYPEAHNSLGSALQEQGRLDEAA 146

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
                +L L      A       L ++++  +AE  L    +++P    A     ++ + 
Sbjct: 147 SHYRRALDLNGGYAEAWANLGTLLRARDEYAQAETALRHALRLDPGHATALTNLGVVLKE 206

Query: 307 T---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           T          L    +  +  E+LV ++ +       ++A A    A+  AP
Sbjct: 207 TGRIAEAEAAHLEALRLAPDDAETLVNLALLREAQDRGEEAEALYGRALAHAP 259


>gi|170738868|ref|YP_001767523.1| TPR repeat-containing adenylate/guanylate cyclase [Methylobacterium
           sp. 4-46]
 gi|168193142|gb|ACA15089.1| adenylate/guanylate cyclase with TPR repeats [Methylobacterium sp.
           4-46]
          Length = 647

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 10/167 (5%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A  I  A ++ +    +H   N+ + + ++ +I    + ++ A       +++       
Sbjct: 454 AAEIAEADRIVTAYLAEHA--NDPMAFYVKAEIYKYRKNFDAALPLYLKSVELDKNFAQG 511

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQ 213
             ++       G    +  Y  KAL +SP  P        +         W  AIT  NQ
Sbjct: 512 YATIGNVKILSGKSAESFAYTEKALRLSPRDPAAKIWKYFICHANAHLARWDEAITTCNQ 571

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
              +   W        I  +   A KG    + H   E LKL     
Sbjct: 572 AIADGPFWQ-----TYIDLAAAYAWKGRASEAGHAVAELLKLMPGYT 613


>gi|162450277|ref|YP_001612644.1| hypothetical protein sce2005 [Sorangium cellulosum 'So ce 56']
 gi|161160859|emb|CAN92164.1| hypothetical protein sce2005 [Sorangium cellulosum 'So ce 56']
          Length = 175

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 34/121 (28%), Gaps = 2/121 (1%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI 183
           L         Q   A +     +++  +        L     R+GD + A   A +AL  
Sbjct: 54  LLGHALYELGQLEPARDAYRAAVRLAPS-FLGARVGLSHALRRLGDTDGAIAQAKEALRR 112

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P       A+   Y      ++A   L        E      +  I   L   D  + +
Sbjct: 113 FPKDGEAMHAMGLSYAARGNRAQARKHLQGFLDAGPEVEAAMEVRQILEMLGVGDDDEPL 172

Query: 244 A 244
            
Sbjct: 173 Q 173


>gi|114571439|ref|YP_758119.1| hypothetical protein Mmar10_2900 [Maricaulis maris MCS10]
 gi|114341901|gb|ABI67181.1| Tetratricopeptide TPR_2 repeat protein [Maricaulis maris MCS10]
          Length = 538

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 5/146 (3%)

Query: 105 KMHSYVSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           +  +      T  + +L+  LLE Q+       + A +  +  L +  T   A   L + 
Sbjct: 98  RFKAIADAFPTAVDPHLMRGLLERQV----GDLDAARQAYQQALDLSETNIEARRGLAWV 153

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
                D  SA+ +A   L   P  P    A     +   +   A T +  +   ++    
Sbjct: 154 CENQRDWASARIHADAVLASEPTDPVALSARSGADMADGKPEAARTLIETQFDASRSTAS 213

Query: 224 NRAILLIARSLENADKGDMIASYHDA 249
           + A +           GD  A++   
Sbjct: 214 HNASVWRRLGDACEAMGDHEAAFSAW 239



 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 50/176 (28%), Gaps = 11/176 (6%)

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  I      + T   L    +  +     +   +  ++I  ++   D A ++       
Sbjct: 47  LKAICRRARQDRTAA-LHWIKQACDAAPGQLGFELAAAQILGDLKEFDAARSRFKAIADA 105

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSAL-------HAMPDPLWISDDGYLSSVWLP 407
            P      L+  + +    + D      Q AL        A     W+ ++      W  
Sbjct: 106 FPTAVDPHLMRGLLERQVGDLDAARQAYQQALDLSETNIEARRGLAWVCENQR---DWAS 162

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSI 463
               +  +   E   P        ++  +   E A    + Q   +    +H  S+
Sbjct: 163 ARIHADAVLASEPTDPVALSARSGADMADGKPEAARTLIETQFDASRSTASHNASV 218


>gi|85858705|ref|YP_460907.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85721796|gb|ABC76739.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 322

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 40/129 (31%), Gaps = 6/129 (4%)

Query: 268 KSLISQNKKRKAEVILEKIWKVNPH--PEIANI-YTHLLSENTVGKLKRALRLEEINKES 324
           +      +  +   I  +  +  P   P I  +    L +      ++   ++  +  ++
Sbjct: 89  RLYREGGQYDRLVSICRQAVEAQPEEPPLIRELGCAFLTAGMADEAVEIFEKMTGLEPDA 148

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTDKILYWT 382
            E   ++    +  G +D A      A+ + P         LA  + A      +     
Sbjct: 149 PELFCLLGDALVAAGRLDSAEEAYRQAITLDPEEAARFCQRLAN-DLAEIGELGRAEEML 207

Query: 383 QSALHAMPD 391
             +L A  D
Sbjct: 208 NRSLEARAD 216


>gi|73670517|ref|YP_306532.1| hypothetical protein Mbar_A3062 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397679|gb|AAZ71952.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 391

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 11/144 (7%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
               +   K+L  +P+   +     + Y+   E  ++     +  +   E     A    
Sbjct: 253 EEKLKEFEKSLKRNPEDADIWFEKGKLYLKLGELEKSREAFEKALEEKSE----NAEAWH 308

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            R     + G    + H    +L+   N   A     + L+S    + A    E  +K+ 
Sbjct: 309 LRGKILFETGSEKEALHAFEMALRKKPNFPEAWYEKGRVLLSLGNPKGA----ENAFKIA 364

Query: 291 PHPEIANIY-THLLSENTVGKLKR 313
              +++        +E    ++KR
Sbjct: 365 A--DLSESKGAKAKAETARARVKR 386


>gi|225873829|ref|YP_002755288.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225792798|gb|ACO32888.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 734

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 91/275 (33%), Gaps = 13/275 (4%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +L   + A+A  Q ++A ++  + L        A+  L     + G  + A      AL 
Sbjct: 90  HLQVARKAMAAHQDSVAAQQYRIFLAD------ALGELAIARAQAGQYSQAAENFDAALA 143

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P++P +     +    A     A +   Q  +                      + D 
Sbjct: 144 LAPNSPALLVEYARSEFQAGNLPHAKSLAQQIIQQYPHNKNALVRAYSILGRTQLAQQDA 203

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY--- 299
            A+  +   ++ L  N       AA  L  +++ + A  I   +     +  + ++Y   
Sbjct: 204 KAARKNLALAVALKPNFPNGYNLAAACLALEDQ-KCAAKIFSDMQASYGNTAVLHMYFGQ 262

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAPRK 358
            +L S+     +    +   +N +   +   ++   L    SID+A  +    + + P  
Sbjct: 263 AYLNSDFQRLAIAEFEKAIALNPKLPGAHYSLAAAYLATQQSIDKAEDELRKEIAVDP-- 320

Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
           +  L  A +    +         T     A  DP 
Sbjct: 321 QSALAYAGLGHLETGQQKLSEALTDLQRAAALDPQ 355


>gi|206603643|gb|EDZ40123.1| Probable cellulose synthase operon protein C [Leptospirillum sp.
           Group II '5-way CG']
          Length = 964

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 7/142 (4%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----Q 213
               F       L  A +   +AL   P        +    +  K +      L+    +
Sbjct: 281 RGNGFHFLSKNQLLKADKSFQRALLADPSDKEAAWGLAIVRMKQKRFQETRDILSWIRGR 340

Query: 214 KKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           ++   ++ +  R       + RS +   +G +  +       +K   +   A     +S 
Sbjct: 341 QRLRPEQVSLMREAEYDENLHRSGQFLGEGKVSEARDILAILIKRRPDRPEAYALMGESD 400

Query: 271 ISQNKKRKAEVILEKIWKVNPH 292
             + +  +A    E+ WK+NPH
Sbjct: 401 RMEGRADRALKWYERAWKINPH 422



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 6/131 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVT 191
           E + + A + L ++++    R  A Y+L  ES R  G  + A ++  +A  I+P +  + 
Sbjct: 369 EGKVSEARDILAILIKRRPDRPEA-YALMGESDRMEGRADRALKWYERAWKINPHSSAIA 427

Query: 192 EAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           E ++  ++   +WS A  FL+          KEW R    L   +      +G+   +  
Sbjct: 428 EGLLWGWLKTGDWSTASRFLSDAPLRTVLPKKEWARWEGFLEKKKGERALIRGNRNLAMR 487

Query: 248 DAIESLKLCDN 258
              ++ K   +
Sbjct: 488 LFRKAEKDRPD 498


>gi|196230744|ref|ZP_03129605.1| hypothetical protein CfE428DRAFT_2770 [Chthoniobacter flavus
           Ellin428]
 gi|196225085|gb|EDY19594.1| hypothetical protein CfE428DRAFT_2770 [Chthoniobacter flavus
           Ellin428]
          Length = 514

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 77/202 (38%), Gaps = 25/202 (12%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ--YNIAHEKLEMMLQIP 150
           +++  H++  A +     ++    +  + + L   ++A +  +  +  A + L   L  P
Sbjct: 95  IALGNHDLRGAEEHFGRAAELDRGNPVHRINLASFRLANSPDKEVHARAVKDLHDALADP 154

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-AVVQQYVLAKEWSRAIT 209
             R  A+  L  ++ R  D  +A + A + L   P+  +  E + +        +  A+ 
Sbjct: 155 NARLLAIRELLADATRRHDRENALQLADQ-LRAMPEHTFADELSCLDIVPTQDRFKAAVA 213

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS------ 263
              ++ +              A + +    G+ + S+  A E+L+       A       
Sbjct: 214 DFEKRSE--------------ADAQKAIATGEWLNSHRLAPETLRWYPQLPSAVRSSTRM 259

Query: 264 -ICAAKSLISQNKKRKAEVILE 284
            I AA++ ++    +K E  L+
Sbjct: 260 QIVAAEAYLAVGDWQKLEAFLK 281


>gi|171320226|ref|ZP_02909284.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
 gi|171094515|gb|EDT39571.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
          Length = 647

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 71/246 (28%), Gaps = 18/246 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +L  Q      ++  A       L++      A   L        D + A  +A     +
Sbjct: 1   MLRAQ-----ERHADAIVHYRRALELNPALRVAHRGLAIALRATDDFDGALEHAR--AGL 53

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             D      A+ +      ++  A     +  +    +    A            +G+  
Sbjct: 54  ESDDAEGHCALGRSLRSMNDFDGAARLFERACEIDPGY----APAWCRLGELRCQQGEYE 109

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298
            S      +++L      A      +  + ++   AE+       +NP     H  +A  
Sbjct: 110 ESLRLCRHAIELDPELADAYNFLGLAYHNLDRMAAAELSHRHAIDLNPDDADAHHNLAAA 169

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              L   +      R  +  E+  + V+  + +  I         A A    A++  P +
Sbjct: 170 LFRLDKLDEAMSEYRIAQ--ELGVDPVKIQLTLGDILWAKRDFTGAVAAFREAVEHDPHR 227

Query: 359 EIFLLL 364
               LL
Sbjct: 228 AYARLL 233


>gi|134095739|ref|YP_001100814.1| tetratricopeptide repeat protein [Herminiimonas arsenicoxydans]
 gi|133739642|emb|CAL62693.1| conserved hypothetical protein; putative TPR repeat [Herminiimonas
           arsenicoxydans]
          Length = 391

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 49/272 (18%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATR 153
                  A ++H  +  +     E+ V+      Q  L     + A E   ++++     
Sbjct: 82  GRGETERAIRVHQNLLARPDLPQEHKVHAQYELGQDYLNAGLLDRAEETFNLLVETQ--- 138

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                                            +     A+++ Y   KEW+RAI     
Sbjct: 139 --------------------------------YSAQAHRALLEIYQREKEWTRAIEAAGA 166

Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            +++     +   A      + +        A+     ++L     ++ A++    + ++
Sbjct: 167 LQESGAGGRQKEIAQFYCELAQDELVHTHADAAIVLLEKALAADRKNVRATMLMGDAFLA 226

Query: 273 QNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESL 328
           ++    A       W+   H   P +A +   L+     VG+ +  + L +       S+
Sbjct: 227 KDDIEAAL----LAWRRVEHQSVPHVALVAQRLMDGYRAVGRPQEGVNLLKFYLAEASSI 282

Query: 329 VIVS---KIALEMGSIDQAHAKAMLAMKIAPR 357
            ++    +  LE+  +D A       ++  P 
Sbjct: 283 DLLEVVFQAVLELEGVDAATQMVSDELRRTPT 314


>gi|148237288|ref|NP_001084796.1| hypothetical protein LOC431836 [Xenopus laevis]
 gi|118835718|gb|AAI28925.1| LOC431836 protein [Xenopus laevis]
          Length = 495

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 57/179 (31%), Gaps = 19/179 (10%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A + + A+T  +    +    N    +    R+      G   ++  D   +++L  + 
Sbjct: 49  AAGQLAEALTHYHAAV-DGDPNNY---LTYYKRAAVYLAMGKFRSALPDLSRAIQLKPDF 104

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---------NTVGK 310
           + A +     L+ Q   ++A      + + +P  E A      + E             +
Sbjct: 105 LAARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQLERVQEVERNVGGASEAYER 164

Query: 311 ------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 +    ++ E +     +  + ++  L++G +  A        K+        L
Sbjct: 165 RDYYGAIALLEKVIEFSPWDPSARELRAECYLQVGELSNAVQDLKPTTKLRNDNRAAFL 223


>gi|328860029|gb|EGG09136.1| hypothetical protein MELLADRAFT_96407 [Melampsora larici-populina
           98AG31]
          Length = 935

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 29/156 (18%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK--------- 215
              GD++ A++    A + +P++  V  A V+      +   A   + + +         
Sbjct: 603 QSNGDVDGARKILGDAFEANPESEQVWLAAVKLESENGQIEAAKQLMKRARDVAGTERIW 662

Query: 216 KNAKEWNRNR-----AILLIARSL---------------ENADKGDMIASYHDAIESLKL 255
                + R       A+ +  ++L                   K ++  +        K 
Sbjct: 663 MKNAVFERQHGSVDEALEITEKALIKFPTSEKLHMIKGQILESKQNLSGAREAYSIGTKK 722

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           C  SI   I +++         KA  I+E+    NP
Sbjct: 723 CPKSIPLWILSSRLEEKVGMTIKARAIMERARHYNP 758


>gi|325133785|gb|EGC56441.1| IgA-specific serine endopeptidase [Neisseria meningitidis M13399]
          Length = 1822

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1167 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1211

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S  
Sbjct: 1212 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1263

Query: 185  --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                A     A  QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1264 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1322

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1323 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1374

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1375 ---SQPQRRKRRAA 1385



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%)

Query: 78   KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
             R ++K  +A       ++A     A +    ++ +     E        Q A   R++ 
Sbjct: 1082 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1132

Query: 138  IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190
               E  E+  +        R+ A      +  R     + Q Y   A    P       V
Sbjct: 1133 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1187

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             +  V+        ++A   L ++++      R  A LL  +  E   +   +A+   A 
Sbjct: 1188 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1236

Query: 251  --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              E+ +           AA+    Q  +RKA  +
Sbjct: 1237 AEEAKRQ----------AAELAHRQEAERKAAEL 1260


>gi|301779812|ref|XP_002925323.1| PREDICTED: protein TANC1-like [Ailuropoda melanoleuca]
          Length = 1872

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 131  LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             A ++Y  A  K       E M      R     +L     +  D   A+ +A+KAL++ 
Sbjct: 1319 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1378

Query: 185  PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            P +     A  +    +++++ A+  L +  K        + +L 
Sbjct: 1379 PKSYEAFYARARAKRNSRQFAAALADLREAVKLCPTNQEIKRLLA 1423


>gi|229025855|ref|ZP_04182253.1| TPR domain protein [Bacillus cereus AH1272]
 gi|228735466|gb|EEL86063.1| TPR domain protein [Bacillus cereus AH1272]
          Length = 219

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDQSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGHEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L ++ + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDESDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205


>gi|220910351|ref|YP_002485662.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
 gi|219866962|gb|ACL47301.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
          Length = 699

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 77/249 (30%), Gaps = 49/249 (19%)

Query: 112 QQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKL-EMMLQIPATREFAV-YSLYFES 164
           Q+   +   L +     L + +  +A+ ++  A     + +   P +             
Sbjct: 458 QRLQTNQPELFFTAADYLQQAEALVAQGRHREAIAAYDQALDLQPDSATTWYQRGNLRRK 517

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---- 220
            +     +A +   +ALD+ PD P           + ++   A    +Q  K        
Sbjct: 518 IQQ--YEAAVKDYDRALDLRPDYPEAWCDRGVALGIMQQHEAAFQSFDQAVKIEPTDQVA 575

Query: 221 -WNRNRAILLIAR---SLENADK----------------------GDMIASYHDAIESLK 254
             NR  A+  + R   ++ + DK                      G    +     ++L 
Sbjct: 576 WLNRGLALQELERYEDAIASFDKVIELNPKAHKAWNNRGYALVKLGYDEDALESFDQALT 635

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSE-NTVGK 310
           L  +   A    A     Q + + A   L+   ++NP       Y     +  + + + +
Sbjct: 636 LDPDYGAAYYNKAICYALQGQVKPALENLQAAVELNP------TYRQEAAVEPDFDELAR 689

Query: 311 LKRALRLEE 319
            +R  RL  
Sbjct: 690 DRRFQRLIA 698


>gi|192361411|ref|YP_001983873.1| TPR domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190687576|gb|ACE85254.1| TPR domain protein [Cellvibrio japonicus Ueda107]
          Length = 875

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 12/199 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            + G  + A  Y     + +P++    +     ++ Y    +   A   L  + +     
Sbjct: 250 IQQGRTSEAYTYQKVLAEANPESNAAQQRFNQALELY-QQNKLEEAEAIL-AELREQFPN 307

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           ++N A LL     +  D       + + I+      + +     AA      NK   A  
Sbjct: 308 DKNTATLLGMIEFQQGDDERAANLFDEYIDPETAASSLL---QMAALVKYRSNKMEDAVE 364

Query: 282 ILEKIWKVNPH-PEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           +L+K  +  P+ P+I   Y        E +        +   +N       + ++K  + 
Sbjct: 365 MLKKASESQPNNPDILATYGLALLDRDEKSAEGAMALEKSLALNPRQQRIRIALAKRYMA 424

Query: 338 MGSIDQAHAKAMLAMKIAP 356
           +G  +QA  +   A +  P
Sbjct: 425 LGQPEQAIGQLQKAYQEQP 443


>gi|271966047|ref|YP_003340243.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
 gi|270509222|gb|ACZ87500.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
          Length = 1048

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 26/179 (14%)

Query: 127 VQIALAERQYNIAHEKLEMML---------QIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            QI     +++ A    E  +            +TR      L  E  R GDL  A+   
Sbjct: 817 AQIHAIGGEHDEAIAAYEHSIALATGLGSQDEVSTRL----GLATERMRAGDLTGARHDI 872

Query: 178 TKALDI-----SPDAP-WVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAI 227
             A         P     V  ++ + Y  + E  RA   L++     ++          +
Sbjct: 873 ETAERAVWERGQPVLEIEVLGSLAELYRRSGEIERADRELDRMETLARRLRLTAETIENM 932

Query: 228 LLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           L+ AR       GD   +      A+ + +    +  A+   A+ L  ++    A   L
Sbjct: 933 LVPARMANLLTAGDAAPARELLPRAVRAARAHMGTPRAAQLLARLLFLEDDPAGAATAL 991



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 72/238 (30%), Gaps = 43/238 (18%)

Query: 161 YFESCR---IGDLN---SAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFL 211
             E+ R    GD     +A   A  A + + D  W  + +      + +  E   AI   
Sbjct: 774 MIEAMRYRERGDRESSATAMTAALHAFEEAGDQWWTAKTLYGLAQIHAIGGEHDEAIAAY 833

Query: 212 NQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                 A        +   +  + E    GD+  + HD   +               +++
Sbjct: 834 EHSIALATGLGSQDEVSTRLGLATERMRAGDLTGARHDIETAE--------------RAV 879

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEE---INKESVE 326
             + +      +L           +A +Y          + L R   L     +  E++E
Sbjct: 880 WERGQPVLEIEVLGS---------LAELYRRSGEIERADRELDRMETLARRLRLTAETIE 930

Query: 327 SLVIVSKIA--LEMGSIDQAHAKAMLAMKIAP----RKEIFLLLAQIEQANSHNTDKI 378
           ++++ +++A  L  G    A      A++ A           LLA++           
Sbjct: 931 NMLVPARMANLLTAGDAAPARELLPRAVRAARAHMGTPRAAQLLARLLFLEDDPAGAA 988


>gi|225433271|ref|XP_002282135.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296083733|emb|CBI23722.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 47/151 (31%), Gaps = 18/151 (11%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A    +     E    M+         + +        GDL  A+ Y ++A    P   
Sbjct: 228 AAADFDESGDVEEYYRRMVNEDPCNPLFLRNYAQLLQSKGDLQRAEEYYSRATLADPQDG 287

Query: 189 WV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS- 245
            +    A +  + + ++ +RA+++  +  K A + +   A        +  D+G+   + 
Sbjct: 288 EILMQYAKL-IWDVHRDQARALSYFERAAKVASDDSHVLAANASFL-WDIEDEGEDDTAE 345

Query: 246 -------------YHDAIESLKLCDNSIMAS 263
                             E+     +   A+
Sbjct: 346 QGLVEEGLSEFHNLDQEDENKPASPSLHPAA 376


>gi|254389793|ref|ZP_05005017.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|197703504|gb|EDY49316.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
          Length = 458

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 78/291 (26%), Gaps = 18/291 (6%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-LAERQ 135
             +        +Y  L+   +      + +H  + +    +       L  Q+       
Sbjct: 119 RAQQQRPRRWTVYRALIDAQSGVGAY-KAVHGALDRLTALYQGSQSRALAAQVYRERAGA 177

Query: 136 YNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                   + +     T  R  A+  L   +   G+   A      AL ++P+       
Sbjct: 178 RTRRANAYDAVAAAAGTTERAVALRRLGDLAWERGEPREAVAGYDAALRLAPELHPARAG 237

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS--YHDAIE 251
             +          A+                     +  SL   ++ +   +     A  
Sbjct: 238 RARALAALGRTDAALAEYRAALTRFPLPEYALEAGELYESLGRHEEAEESYAAVLETADR 297

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIA-----NIYTHLLSE 305
           + +   +    ++   +         +A  +L   W+      +IA      +Y    ++
Sbjct: 298 AERYGVD---QTLTRGRYEADHGDPDEAVRLLTDAWEAGRRSTQIADGLGWALYRAGRAD 354

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +   KRA +    +           +I   +G    A      A+++ P
Sbjct: 355 EALPYAKRATKEGLRSPLFAYHR---GQIERSLGLYGSARRNIGTALRVNP 402


>gi|168703939|ref|ZP_02736216.1| hypothetical protein GobsU_30680 [Gemmata obscuriglobus UQM 2246]
          Length = 420

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 8/157 (5%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAV 194
             A    + +L+      +A+      +     G  ++A    T+ L +SP++       
Sbjct: 173 EAAVAHFDALLKADPQNSWAL--FMRAASNNENGKHDAAIADYTEYLKLSPNSSAALNNR 230

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              ++  KE+ +AI       K   ++    A+    R     +K D   +  D   +++
Sbjct: 231 GTVWINKKEYDKAIEDFTTVLKADPKY----AVAYSNRGHALLNKKDYEKAVADCDRAIE 286

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           L      A    A++L    K   A    E   K++P
Sbjct: 287 LDPQFAAAVWYRARALAKLKKYDAATAGFESAAKLDP 323


>gi|121997136|ref|YP_001001923.1| hypothetical protein Hhal_0327 [Halorhodospira halophila SL1]
 gi|121588541|gb|ABM61121.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila
           SL1]
          Length = 413

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 7/163 (4%)

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           RA  LI ++  +   GD +++      +L++  +   A +  A+ L    +  +A  +L+
Sbjct: 225 RADSLIQQAETHQRAGDTLSASQSYRRALEMDPDRHEARVGYARMLARAQRTERARGVLQ 284

Query: 285 KIWKVNP-HPEIANIYTHLLSEN--TVGKLKRALRLEEINKESVESLVIVSKIAL--EMG 339
           +  +  P H  +A +Y HL  E       +     +    +      V     AL  + G
Sbjct: 285 EGLERAPEHERMARLYAHLSEERGQPQDGIDALEPVYRAQEGEP-GAVAAHLAALYRQTG 343

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN-TDKILYW 381
           + DQA        +  P   ++     +      +    +  W
Sbjct: 344 AHDQALMLYSELAEAEPDNGLWQAGIAVAAEQMGDHEGALRAW 386


>gi|221068238|ref|ZP_03544343.1| Tetratricopeptide TPR_4 [Comamonas testosteroni KF-1]
 gi|220713261|gb|EED68629.1| Tetratricopeptide TPR_4 [Comamonas testosteroni KF-1]
          Length = 385

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 177 ATKAL---DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232
           A +AL   + +        A++  Y  +++W++A   + + +   + +++   A  L   
Sbjct: 128 AEEALNRLEGTQYEGEARLALLAIYERSRDWAQAAAIVRKMQAAGQGDFSTRLAHYLCED 187

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +      G +  ++    ++L+    +    +  A+    Q +  +A   L+ 
Sbjct: 188 AQSQVAHGQLDKAFAQLQQALETAPQAPRPRLELAQLQHRQGRSEQALSSLQA 240


>gi|254282230|ref|ZP_04957198.1| sulfotransferase [gamma proteobacterium NOR51-B]
 gi|219678433|gb|EED34782.1| sulfotransferase [gamma proteobacterium NOR51-B]
          Length = 470

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 5/124 (4%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  Q+     Q   A    +  +++        Y+L      +GD+++A+    +A+ +
Sbjct: 59  LLMTQV----GQREQALTLYQRAVELDPGEAKHYYNLATLQRSLGDVSAAEHNLDRAVAL 114

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P+     +   +      +    +  L    +      R    +  A + E  D  +  
Sbjct: 115 NPEDYEAYKIRSELR-RQTDTDNHVDELEHVLERGIRETRGEVQVCFALAKELEDLSEYE 173

Query: 244 ASYH 247
            S+ 
Sbjct: 174 RSFQ 177


>gi|254443892|ref|ZP_05057368.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198258200|gb|EDY82508.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 477

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 39/286 (13%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +      +  A  +    ++    +    + L      L + ++  A +  +  L + 
Sbjct: 110 GRILAGYGQLEEATPLFQKAAKLDPQYTPSHIRL--GDTLLKQNRFEEARDAYQAALSVD 167

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
           +   +A+      +    D + A++   KA+ +S              +       A   
Sbjct: 168 SQNPYALVGYARIAIADEDWSEARQQLEKAVQVS-----------NYQI------GADLL 210

Query: 211 LNQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            +  +K   E      I  L   S  +      +    D+ ++ ++          A   
Sbjct: 211 ADVYEKLGLEAKETEVIQNLSWGSYADIPDPWSLTLMDDSYDAYQVS--------IAGGW 262

Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
           +  Q         +++   ++P       +IA IY +L  +          R  E+  + 
Sbjct: 263 VAHQGDVLTGLRYIKRAVMLDPESSTLQYQIAGIYLNLGDDQNAEI--HFKRCVELQPDF 320

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            ++ + + +IA    S          A++ AP          IE+ 
Sbjct: 321 SDAWLSLIEIAKRRQSPTLLRRTLDSALRAAPDSPSL----NIERG 362



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 56/138 (40%), Gaps = 15/138 (10%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEE 319
            + L    +  +A  + +K  K++P        +H+   +T+ K  R             
Sbjct: 110 GRILAGYGQLEEATPLFQKAAKLDPQ----YTPSHIRLGDTLLKQNRFEEARDAYQAALS 165

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS--HNTDK 377
           ++ ++  +LV  ++IA+      +A  +   A++++  +    LLA + +         +
Sbjct: 166 VDSQNPYALVGYARIAIADEDWSEARQQLEKAVQVSNYQIGADLLADVYEKLGLEAKETE 225

Query: 378 ILYWTQSALHA-MPDPLW 394
           ++       +A +PDP W
Sbjct: 226 VIQNLSWGSYADIPDP-W 242



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 13/184 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GD+ +  RY  +A+ + P++  +   +   Y+   +   A     +  +   +++    
Sbjct: 266 QGDVLTGLRYIKRAVMLDPESSTLQYQIAGIYLNLGDDQNAEIHFKRCVELQPDFSDAWL 325

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L+         +            +L+   +S   +I   K +++Q +  +A    +K 
Sbjct: 326 SLIEIAKR----RQSPTLLRRTLDSALRAAPDSPSLNIERGKVILAQGRHSQAIPYFQKA 381

Query: 287 WKVNPHP-----EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             V PH      E+A  Y      E  V +L+    L         +L  ++  A+  G 
Sbjct: 382 IDVRPHEAVGYIELAQAYLKSNQVEKGVEQLR--EALLR-EPNHPIALSSMAFDAIMRGD 438

Query: 341 IDQA 344
              A
Sbjct: 439 KADA 442


>gi|145298382|ref|YP_001141223.1| cytochrome c-type biogenesis protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851154|gb|ABO89475.1| Hypothetical cytochrome c-type biogenesis protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 424

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 10/149 (6%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              V  ++    +  L  + K+  E N  R  LL+ R     D  D   +      +  L
Sbjct: 137 DAQVTEQDLLDFMLALRTRLKD--EPNDYRGWLLLGRLS--LDGNDPDMAREALERAYDL 192

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLK 312
                M ++  A++L+      +A+ +L     ++P    A     +  L  E+    L 
Sbjct: 193 APQKTMVAVPYAQALMMTGDDAQADELLRSAIALDPANIEARSVYAFMALQKEDFKTALM 252

Query: 313 R-ALRLEEINKESVESLVIVSKIALEMGS 340
           R    L  + K S  +   + + +++   
Sbjct: 253 RWREMLPLMEKGS--TRYAMVERSIDYAE 279


>gi|255554412|ref|XP_002518245.1| fkbp-rapamycin associated protein, putative [Ricinus communis]
 gi|223542592|gb|EEF44131.1| fkbp-rapamycin associated protein, putative [Ricinus communis]
          Length = 1440

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 79/271 (29%), Gaps = 42/271 (15%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             LA K  ++    H    E                +  A    + M   P     A+  
Sbjct: 259 GALAEKCRAFAKALHYKEME----------------FEGARS--KKMDANPVAVVEALIH 300

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +  +  +         YA + LD+     W        Y   + W  A+     K   A 
Sbjct: 301 INNQLHQHEAAVGILTYAQQNLDVQLKESW--------YEKLQRWDDALKAYTAKAAQAS 352

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             +     L++  +L        +A+     E   LC      +  +A+  +       A
Sbjct: 353 SPH-----LVLEATLGRMRC---LAALARWEELNNLCKEYWTPAEPSARLEM-------A 397

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            +     W +    ++A  Y + L +    KL+           S       + + +  G
Sbjct: 398 PMAANAAWNMGEWDQMAE-YVYRLDDGDETKLRGLGNTAATGDGSSSGTFFRAVLLVRRG 456

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
             D+A      A K    +   L+L   E+A
Sbjct: 457 KYDEAREYVERARKCLATELAALVLESYERA 487


>gi|238495490|ref|XP_002378981.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus flavus NRRL3357]
 gi|220695631|gb|EED51974.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus flavus NRRL3357]
          Length = 638

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 80/213 (37%), Gaps = 18/213 (8%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            AA +  LA   H+       +H   L ++L         ++  A +  +  + +  T  
Sbjct: 403 AAADDFELAI-SHNKDDADIYYHRAQLHFIL--------GEFAEAAKDYQKSIDLDRTFI 453

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           ++   L     ++G + SA     +++    D P V     +  +  + +S AI   ++ 
Sbjct: 454 YSHIQLGVTQYKMGSVASAMATFRRSVKNFEDVPDVYNYYGELLLDQQNFSEAIEKFDKA 513

Query: 215 KKNAKEWNRN--RAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K+        + LI ++L     K D   + +   ++L +     +A    A+ L+
Sbjct: 514 VEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALIIDPECDIAVGTMAQLLL 573

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
            Q K  +A    E+        E+A     +++
Sbjct: 574 QQGKVSQALKYFERA------AELARTEAEIIN 600


>gi|188575467|ref|YP_001912396.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188519919|gb|ACD57864.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 551

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 20/250 (8%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L +A+     
Sbjct: 302 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 361

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +     + LL AR L    +
Sbjct: 362 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 417

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-- 296
            D+  +  D  + L     ++ A +           + ++A  ++++    +P   +A  
Sbjct: 418 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPD-NLAIV 476

Query: 297 -----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
                 +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A
Sbjct: 477 DSYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEA 532

Query: 352 MKIAPRKEIF 361
            ++ P     
Sbjct: 533 RRLDPDNRAL 542


>gi|184157110|ref|YP_001845449.1| hypothetical protein ACICU_00790 [Acinetobacter baumannii ACICU]
 gi|183208704|gb|ACC56102.1| hypothetical protein ACICU_00790 [Acinetobacter baumannii ACICU]
          Length = 572

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 47  DQALQQSMVAEFALAYDDIPTALHNYTVLAIKSNSTTIKQRALDV-ALEYNDLQAALNIA 105

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 106 THWVVQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 165

Query: 225 RAILLIARSLENADKGDMIASYHDAIES---------------LKLCDNSIMASICAAKS 269
           R +LL A           I +    +E+               L+         +  A  
Sbjct: 166 REVLLTALRSSAEKDNPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANL 225

Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K    +K N    +A +   +        L++  ++ + N  + E
Sbjct: 226 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIQSNPHAEE 285

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 286 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 339



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 392 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 449

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 450 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 491


>gi|157812772|gb|ABV81131.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase [Thulinius stephaniae]
          Length = 289

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 8/166 (4%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFES 164
            ++   +    H + L  L    I   +   B A     + +  +P     A  +L    
Sbjct: 42  CYNTALRLCPTHADSLNNL--ANIKREQGLIBEAVRLYYKALEVLPEF-AAAHSNLASVL 98

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G L  +  +  +A+ ISP        +        +   AI   ++       +   
Sbjct: 99  QQQGKLQESIAHYKEAIRISPTFADAYSNMGNTLKEMGDXQGAIRCYSRAITINPAF--- 155

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            A      +  + D G++  +      +LKL  +   A    A  L
Sbjct: 156 -ADAHSNLASIHKDTGNITEAVASYRTALKLKPDFPDAFCNLAHCL 200


>gi|42523920|ref|NP_969300.1| hypothetical protein Bd2490 [Bdellovibrio bacteriovorus HD100]
 gi|39576127|emb|CAE80293.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
           bacteriovorus HD100]
          Length = 275

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 10/138 (7%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +    + G +  +       ++     +   +  AK L    +  KA   L+K   ++ 
Sbjct: 28  LAEAYREMGMLQEARKTVTAGVQRHPQFVGGLVTYAKVLRDLGELSKALETLKKATALSS 87

Query: 292 HPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI-ALEMGSIDQ---A 344
              +A+      HL  +N    LK    +  +N  S  +   V K+ +L     D+   A
Sbjct: 88  ENILAHQLMAEVHLAQKNPKDALKSFKMVLFLNPNSKSAQKAVQKLESLTADEYDEDVFA 147

Query: 345 HAKA---MLAMKIAPRKE 359
             K     L     P   
Sbjct: 148 MTKLPEVNLESSATPTGR 165


>gi|332975559|gb|EGK12449.1| glycosyl transferase family protein [Desmospora sp. 8437]
          Length = 389

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 14/139 (10%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +  + D   A +YA +A++  P+       V           +A   L+Q  +   +   
Sbjct: 244 ALSMNDSELALQYAEQAIEQEPNFSDAYFMVGTILAQHNHLDKAEAALHQALERKAKTPY 303

Query: 224 NRAILLIARSL-------ENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLIS 272
               LL   S+       E  +         DA+   K            ++  A     
Sbjct: 304 ---YLLADESMSTWKPLNELVEISRRKNRLEDAVGYAKRSLEVYPTNYRTNLMLASLYKQ 360

Query: 273 QNKKRKAEVILEKIWKVNP 291
             +   A+   ++  K+NP
Sbjct: 361 LKRPEDAKKAYQEAVKINP 379


>gi|325283404|ref|YP_004255945.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus
           proteolyticus MRP]
 gi|324315213|gb|ADY26328.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus
           proteolyticus MRP]
          Length = 569

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 96/297 (32%), Gaps = 9/297 (3%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            A+      +       E L  L     AL +     A +  E ++        A + L 
Sbjct: 94  TAQPSAGQPAPAPALTAEQLSVLQAAYTALEQGNAAQARQGFEQLISQNYRHPEAHFGLA 153

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAK 219
                 G   +A+    +   ++PD       +    V A ++  A+T+  Q        
Sbjct: 154 LALLAQGQTEAARFELGQLTALAPDRYEGPYNLGVLAVQAGQYPEALTYFGQAATLARTT 213

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                +  +L A + E +   D         E + L   +    +  A++     +   A
Sbjct: 214 ASEDGQLYVLRALAAEQSRAADYAGLRQTLGEMVALDPGNAELKLRLAQAQTLTGEGVAA 273

Query: 280 E-VILEKIWKVNPHPEIANIYTHLL-----SENTVGKLKRALRLEEINKESVESLVIVSK 333
                E +       + A + + +       E  + +L RAL+      E    L+  ++
Sbjct: 274 LPGTYEALGSTRTQADAALLLSDIYEAQGLPERGLSELDRALQSVTAEDERARLLLRRAR 333

Query: 334 IALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           +   +G    A   A  ++++       F LL  + +   ++   +  + ++AL   
Sbjct: 334 LLDALGQSAAAITAAEQSVRLRGNDAAAFALLGDLRRGAGNSQGALQAYREAALLEP 390


>gi|304385039|ref|ZP_07367385.1| tetratricopeptide (TPR) domain protein [Pediococcus acidilactici
           DSM 20284]
 gi|304329233|gb|EFL96453.1| tetratricopeptide (TPR) domain protein [Pediococcus acidilactici
           DSM 20284]
          Length = 433

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 13/159 (8%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDI 183
                A  ++  A    E +     T +     L  E     ++ ++  AQ    K +D+
Sbjct: 193 AASYAASGKFEKAIAYYEQIHDEDLTPDI----LMQEGITYLQLNEVQRAQTVLEKVVDM 248

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                 V   ++  Y   +EW + +T   +    A ++N +  +L    +    D   + 
Sbjct: 249 DSSYSSVYPYLIDAYRRDEEWDKGLTAAQEGL-AADQYNPDLYLLAAEMAEHAHDDELVE 307

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                A+E   L  ++  A I        Q   R AE +
Sbjct: 308 KYLQKAVE---LAPDNQAAIIRITDFYNRQG--RYAETL 341


>gi|302812149|ref|XP_002987762.1| hypothetical protein SELMODRAFT_126882 [Selaginella moellendorffii]
 gi|300144381|gb|EFJ11065.1| hypothetical protein SELMODRAFT_126882 [Selaginella moellendorffii]
          Length = 513

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 32/116 (27%), Gaps = 10/116 (8%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISP-- 185
               +   + A E  + M +   T    +      +   G   + A R A + L   P  
Sbjct: 89  ALSRKGDLDHAREVFDAMAEEDRTEVSWL------AMIQGYARHGALRKAAELLKSMPRP 142

Query: 186 -DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                   A++  +        A    +    + ++     A++         D+ 
Sbjct: 143 HKGAAAHNALITAFAEKGHLVGAKKTFDSMAADEQDVVSWTAMMAAYAQSGRLDEA 198


>gi|299538577|ref|ZP_07051860.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1]
 gi|298726164|gb|EFI66756.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1]
          Length = 422

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 70/205 (34%), Gaps = 8/205 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G+ + A     +  + SP+ P     +   Y +   +  A   +N+      +    
Sbjct: 80  MELGNEDEALDLLLEIEETSPEYPQALLVLADYYQMQGLFEVAEKRINEALAILPD---- 135

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVI 282
             +L  A++    + G  + +     +  +  +      +    A+   +      A   
Sbjct: 136 EPLLHFAKAELLFETGRFLEAARLYEDLYEQQNEFAGIQLVERLAEVYRAGAAYETAFDY 195

Query: 283 LEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             K  +    P+I     Y+   S+     +K+   L+E++ +   + +++++       
Sbjct: 196 YVKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAYLLLAESYAMTED 255

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLA 365
             +A+A     +K     +   L A
Sbjct: 256 NQKAYAAIQEGLKRDEYDKSLYLFA 280


>gi|171915884|ref|ZP_02931354.1| TPR domain protein [Verrucomicrobium spinosum DSM 4136]
          Length = 596

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 61/204 (29%), Gaps = 37/204 (18%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++A  +     +    ++     H   L + L  +   A  +   A       L+  A  
Sbjct: 31  ALADLDANAPAQPGQQLAGVAEQHAVALAHYLTARNLEASGKVRDALPHYLSFLKGDAGE 90

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              V  +   +       +A     +A+   P +P  +   +Q  +              
Sbjct: 91  PELVAHIAELTLNFQGEEAAVALLEQAIKSHPKSPEPSANFIQFCLTHG----------- 139

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                                 +A+ G +  +   A ++L        A   A +  ++Q
Sbjct: 140 ----------------------SAENGLLARAAKVAEQALSSFPQDAAAYETAVRLHLTQ 177

Query: 274 NKKRKAEVILEKIWKVNPHPEIAN 297
            ++++A  +LE+       P+ A 
Sbjct: 178 GRRKEASAVLERALA----PDFAQ 197


>gi|162456989|ref|YP_001619356.1| hypothetical protein sce8705 [Sorangium cellulosum 'So ce 56']
 gi|161167571|emb|CAN98876.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
            cellulosum 'So ce 56']
          Length = 2686

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 4/127 (3%)

Query: 168  GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            GD+ SA+        I+P    V E  V+      +       L+Q    +++    RA 
Sbjct: 1733 GDVESAKDTLESVARIAPREA-VIELRVEIARREGDGHALAAALDQLASASRDAPERRAQ 1791

Query: 228  LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS---QNKKRKAEVILE 284
            LL+  +   +  GD   +   A  ++KL   S  A + A +           R A+  +E
Sbjct: 1792 LLVEAARATSTLGDDATALERARRAVKLAPESPDAVLEARRIEYRLRGTGTPRDAQAAVE 1851

Query: 285  KIWKVNP 291
            ++ ++ P
Sbjct: 1852 ELGRIAP 1858


>gi|152994353|ref|YP_001339188.1| TPR repeat-containing protein [Marinomonas sp. MWYL1]
 gi|150835277|gb|ABR69253.1| Tetratricopeptide TPR_2 repeat protein [Marinomonas sp. MWYL1]
          Length = 293

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 69/162 (42%), Gaps = 5/162 (3%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y +L   ++  A+  I L ++    + ++ +   +  + +   +  L   Q N A E+ +
Sbjct: 90  YASLSASILP-ASEAIALYKRAQDELGKEVSNSQQQAICVGLGRAYLELAQLNKAKEQFQ 148

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             L+       A+  L   +   GD+++AQ     ALDI+P    V   +   ++ + E+
Sbjct: 149 CALEASPKSVMALNGLGVIASMNGDVSTAQENLQDALDIAPSNEIVLNNLALSWLSSGEF 208

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            +AI+ L  K+ +     R    L +A +    D+ DM    
Sbjct: 209 QKAISLLKTKQSSQNISTR----LNLALAYVLIDREDMAREL 246


>gi|104782032|ref|YP_608530.1| hypothetical protein PSEEN2965 [Pseudomonas entomophila L48]
 gi|95111019|emb|CAK15739.1| conserved hypothetical protein; putative signal peptide
           [Pseudomonas entomophila L48]
          Length = 1000

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 42/143 (29%), Gaps = 15/143 (10%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQR 175
           +    L       A      A      +         R  A       +   GD +SA+R
Sbjct: 490 DPGSRLPLAYALEASGDSQAALPIWNSLPASAWTDNARLTAARG----ALNTGDASSARR 545

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +   A   +    W   A + Q     +  +A+ F  +  ++    +        A +  
Sbjct: 546 HWD-AAAHNSADDWALGAAIAQR--QGDLPQALAFQREALRHNPRADH-----YYAAAGT 597

Query: 236 NADKGDMIASYHDAIESLKLCDN 258
               GD   S     E++++  +
Sbjct: 598 AQQAGDTAQSTAWLAEAVRMAPD 620


>gi|227818747|ref|YP_002822718.1| hypothetical protein NGR_b05030 [Sinorhizobium fredii NGR234]
 gi|36959000|gb|AAQ87425.1| Tetratricopeptide repeat family protein [Sinorhizobium fredii
           NGR234]
 gi|227337746|gb|ACP21965.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 589

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 15/160 (9%)

Query: 157 VYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           V  L  E       GD+++A +  ++AL ++P+ P +      +  L+ EW      + +
Sbjct: 422 VRGLQAEMLAFFFRGDVDTALKIGSRALALNPNDPELRAEYGLRLALSGEWKTGCALVAE 481

Query: 214 KKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                        A L +   ++              +++  L        +  A  L  
Sbjct: 482 AVSRNPGPIGYFEATLALCSYMQQDYATAEQWIRAADVQANPLY------HLIVAAILGQ 535

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
             K  +A    E+ W     P++     ++  E  +  L+
Sbjct: 536 LEKSAEAAR--ERRWIEAHAPDLLE---NIRGEVAMRILR 570


>gi|317126713|ref|YP_004100825.1| tetratricopeptide TPR_4 [Intrasporangium calvum DSM 43043]
 gi|315590801|gb|ADU50098.1| tetratricopeptide TPR_4 [Intrasporangium calvum DSM 43043]
          Length = 862

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 6/141 (4%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL----DISPDAPWV 190
              +A +  + + Q     E  +++    +   GDL  A     +A      +    P +
Sbjct: 151 DARLAEQLFDSLGQEFEATEV-LHNRAAIAMLRGDLPRALELFDRAADRYAALDRSNPGL 209

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
               V+  + A  +  A T   +           RA L++A++      G    +   A 
Sbjct: 210 DLDRVEALLTAGLYDEAETVAREGLSRLDLAPVKRAELMLAQARAALATGKATLAGERAS 269

Query: 251 ESLKL-CDNSIMASICAAKSL 270
           E+ +L  D    A +  A+ L
Sbjct: 270 EAARLFTDQLRDAWVDRARLL 290


>gi|281355287|ref|ZP_06241781.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281318167|gb|EFB02187.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 940

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 16/206 (7%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---------YLLEVQIA 130
              +  +AL    + +      LA +     + +        +          +   Q A
Sbjct: 567 RQQRENQALAEAKLKL---EAELAARPVIRQAAEPEVAVPPRIVTAKGNPAELVAAGQKA 623

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             E   ++A       L++  +   A   L     +  + N A      A   +PD P +
Sbjct: 624 EQEESTDLAIWNYRTALELDPSNAAAASRLGMIHLKREEFNRALPLLDIARRATPDDPEL 683

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
           T A        +++  A+  L   +K   +  R    LL+  +   A  G +  +     
Sbjct: 684 TAAAAAALNGQEKYGNALALLEPLRKKYPDDLR----LLLPFAKAQAGSGQLKIAGELYR 739

Query: 251 ESLKLCDNSIMASICAAKSLISQNKK 276
           ++ KL   S +  +  A+  +  +K 
Sbjct: 740 QAEKLAPASPLPKLELARLYLQGDKP 765


>gi|110598468|ref|ZP_01386739.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
 gi|110339918|gb|EAT58422.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
          Length = 197

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 26/183 (14%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           +  R  D   A+    +ALD                +  +  S A+  LN+      E N
Sbjct: 9   QRERETDSLDARTLYEQALD---------------CMHEQRNSDALILLNRVL----ELN 49

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           R  A  L AR++ N    +   +  D ++++ +    + A        ++  K+ +A   
Sbjct: 50  RRDAQALYARAVTNLSMSNFRKAGCDLLKTIAVDPGFLEAYKHLGFVQLTLGKEEEALKT 109

Query: 283 LEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L+K   ++P     +  I + +  L         +       +  ESVES   ++   L 
Sbjct: 110 LQKALDIDPGYAGVYGVIGDTWLDLGEYEKAK--EAFESALRLEPESVESHYKIAMYYLS 167

Query: 338 MGS 340
            G 
Sbjct: 168 RGD 170


>gi|94970897|ref|YP_592945.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552947|gb|ABF42871.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 196

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 1/142 (0%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y  A  + +  +++  +       L       G+  +A  Y  +A + +PD P    ++
Sbjct: 55  DYPAAIAEFKRAVELKPSWADGYLWLANAMMENGEAEAAVSYYERAGEFAPDDPRPAISL 114

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
            + +   K +  AI    +  +    + +  A L +A +L      D      + + +LK
Sbjct: 115 GRCFAKLKRYDDAIRMFRRGIELKPHYGKASAHLFLAEALLACRAIDQARREWEVVLTLK 174

Query: 255 -LCDNSIMASICAAKSLISQNK 275
            +      A+  A + L    +
Sbjct: 175 PMYPEHESAADTAREMLAKHKR 196


>gi|302877666|ref|YP_003846230.1| SEC-C motif domain-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302580455|gb|ADL54466.1| SEC-C motif domain protein [Gallionella capsiferriformans ES-2]
          Length = 553

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 47/174 (27%), Gaps = 9/174 (5%)

Query: 128 QIALA---ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           Q ALA         A      ++Q       A++ L   + +      A     KA+ I+
Sbjct: 46  QTALAHHQAGHLAHAEAIYTQIIQNSPRHPDALHYLGMLASQTDRGEMAVTLIRKAIHIA 105

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P          +     + +  A            ++    A   + + L+  D G+   
Sbjct: 106 PSHLMHFNLATELRRQTR-FEEAAESFRNALALKADF--FEAYYSLGQLLQ--DMGEHAE 160

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN 297
           +     ++  L        +  A           +   L     + P HP    
Sbjct: 161 AEACIRKAADLSPEYADVYVALASIYNDLGNFDASRSALTSALSIQPQHPAAWA 214


>gi|227432251|ref|ZP_03914247.1| tetratricopeptide repeat family protein [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|227352024|gb|EEJ42254.1| tetratricopeptide repeat family protein [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 442

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 6/150 (4%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL+  Q + A +     L+  +     +YSL  E   +G LN ++R   K L+  PD   
Sbjct: 33  ALSSGQLDDAKKFFAQSLRKDSDDL--IYSLAEELYALGFLNQSRRAYKKLLEKYPDEDE 90

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +  A+    +   E   A  +L Q K ++  + +     L+ ++     +G   ++ H  
Sbjct: 91  LRTALADIAIEDGEIDEAQDYLAQIKPDSPSYLQ----ALLVKADVYQSEGLTESAEHSL 146

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +++ ++  +  +     A+   +     KA
Sbjct: 147 LQAERIAPDEDVIQFALAEFYYANQSYPKA 176


>gi|209525934|ref|ZP_03274468.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209493611|gb|EDZ93932.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 745

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 4/92 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GD  +A+     AL I+P+   V   +   Y   K W+ AI    +  +         A
Sbjct: 58  QGDFMAAESCYHSALKIAPNMAEVYANLGSLYAQNKRWNEAINAYEKALEIRPNM----A 113

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                 +      G    +     +++ L  +
Sbjct: 114 GFYRNLAKVFTQCGQPERATEYWCKAILLSAD 145


>gi|326437831|gb|EGD83401.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 716

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 87/306 (28%), Gaps = 54/306 (17%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----- 148
           ++AA  +  AR      +     H   LV             ++ A       L      
Sbjct: 256 AVAAVEVMQARGEDKTEAFARVCHQVGLVL-------SEFGGHDRAIASYNAALSILLRT 308

Query: 149 --IPATREFAVYSLYFESCR-IGDLNSAQRYATKALDIS--------PDAPWVTEAVVQQ 197
                     +Y+    +    GD + A +   KAL I                  +   
Sbjct: 309 EGEEGKNVAGLYNNLGTAYDGKGDYDKAIQCYEKALAIRVEMLGEEHSSTADTYNNLGNA 368

Query: 198 YVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENA--DKGDMIASYHDAIESL 253
           Y    E+ RAI F  +      E    ++ +       L NA  +KG    +      +L
Sbjct: 369 YHSKGEYDRAIEFFEKALVIRMEVLGEKHLSTADSYLGLGNAYYNKGKYDRAIRFYENAL 428

Query: 254 KLCDNSI----MASICA----AKSLISQNKKRKAEVILEKIWKV------NPHPEIANIY 299
            +   ++     ++  A      +  S+ +  +A  +  K   V        HP  A  Y
Sbjct: 429 AMKVEALGEKHPSTAGAYGNLGNAYASKGEYDRAIQVYTKGLAVTVEALGEKHPSSAATY 488

Query: 300 THL----LSENTVGKLK---------RALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            +L     S+    +           R   L + +  + E+   +       G  D+A  
Sbjct: 489 NNLGNAHDSKGDYDRAVECYEKALAIRVEALGQKHPSTAETYNNLGIAYQNKGQYDKAIQ 548

Query: 347 KAMLAM 352
                +
Sbjct: 549 HYEKGL 554


>gi|325914836|ref|ZP_08177171.1| PAS domain S-box [Xanthomonas vesicatoria ATCC 35937]
 gi|325538927|gb|EGD10588.1| PAS domain S-box [Xanthomonas vesicatoria ATCC 35937]
          Length = 653

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 11/169 (6%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 70  RSLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLVATLRTLLRARH 129

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +      +       A L          +    A+  DAI +  L   
Sbjct: 130 AEEALRVSEARFREIFEHISAPIAVVDAALHTHELNAAFQRLIGDATPADAIGAAGLDQT 189

Query: 259 SIMASICAAKSLISQ--NKKR--KAEVILEKIWKVNPH--PEIANIYTH 301
           + + ++ +A +   +        +   + E  W+V+P+  P++  +   
Sbjct: 190 ATVQALASALAQRERWSGTLSILRDGKLCETEWRVSPYREPDLGLLLVE 238


>gi|16330731|ref|NP_441459.1| photosystem I assembly protein Ycf3 [Synechocystis sp. PCC 6803]
 gi|18202349|sp|P74063|YCF3_SYNY3 RecName: Full=Photosystem I assembly protein ycf3
 gi|1653223|dbj|BAA18139.1| ycf3 [Synechocystis sp. PCC 6803]
          Length = 173

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 10/116 (8%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
            E  VY  +   A A+ +Y  A +  E    + + P  R + +Y++       GD   A 
Sbjct: 33  KEAFVYYRDGMSAQADGEYAEALDNYEEALRLEENPNDRSYILYNMALIHASNGDHEKAL 92

Query: 175 RYATKALDISPDAPWV--TEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               +A++++P  P      AV+     ++   A +   A    ++  +  K+  R
Sbjct: 93  GLYQEAIELNPKMPSALNNIAVIYHFQGEKAKEAGQEDDAENLFDKAAEYWKQAIR 148


>gi|218885582|ref|YP_002434903.1| hypothetical protein DvMF_0478 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756536|gb|ACL07435.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 599

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 86/262 (32%), Gaps = 20/262 (7%)

Query: 105 KMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQI----PATREFAVY 158
           K+++              +  LL       E ++    + L  +++     P    F + 
Sbjct: 297 KLNNPAKAYELARQGPETFGFLLTAATLFLEEKFYEQADALLTVVKDTPGAPEEVYFYLA 356

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L FE  R  D   A  + ++    +           Q    + + + A+  L + +K  
Sbjct: 357 VLSFEGKR--DPAGALHWLSEITPSNKYHDRALRLKSQLQYESGDLTGALATLKEGQKTY 414

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                 +       +    +     A+     E+ K   +    +      L  + +K +
Sbjct: 415 P----GQKEFWQMEAQLYLNSDKPEAALAVMDEARKFWPDDAEIAFMRGIILDERGQKAE 470

Query: 279 AEVILEKIWKVNPHPEIANI-----YTHLLSENTVGK-LKRALRLEEINKESVESLVIVS 332
           A  ++E++  +  HP  A       YT       + + L+   R  E + +S   +  ++
Sbjct: 471 AFTMMEQV--IADHPRHAQALNYVGYTLAEQGRDLDRALELITRALEESPDSTYIIDSLA 528

Query: 333 KIALEMGSIDQAHAKAMLAMKI 354
                 G +++A      A+++
Sbjct: 529 WTHYRRGELNEAWQAVSRAVEL 550


>gi|119497941|ref|XP_001265728.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Neosartorya fischeri NRRL 181]
 gi|119413892|gb|EAW23831.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Neosartorya fischeri NRRL 181]
          Length = 630

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 9/182 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+     ++  A +  +  + +  T  F+   L     ++G + SA     +++    
Sbjct: 417 RAQLHFILGEFAEAAKDYQKSIDLDRTFIFSHIQLGVTQYKMGSVASAMATFRRSVKNFE 476

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENAD-KGDM 242
           D P V     +  +  + +S AI   ++  +  K+        + LI ++L     K D 
Sbjct: 477 DVPDVYNYYGELLLDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDF 536

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             + +   ++L +     +A    A+ L+ Q K  +A    E+        E+A     +
Sbjct: 537 QEAENLCQKALIIDPECDIAVGTMAQLLLQQGKVSQALKYFERA------AELARTEAEI 590

Query: 303 LS 304
           ++
Sbjct: 591 VN 592


>gi|319945707|ref|ZP_08019958.1| hypothetical protein HMPREF9421_0139 [Streptococcus australis ATCC
           700641]
 gi|319748067|gb|EFW00310.1| hypothetical protein HMPREF9421_0139 [Streptococcus australis ATCC
           700641]
          Length = 355

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYA 177
           L +Q  + E     A E  + +L+    P  +  +  SL   +   GD   A+ YA
Sbjct: 223 LALQGEVLEGDREAAKEHFQALLKRTDNPMIQTASQLSLLHIALLEGDHEKAEEYA 278


>gi|281337461|gb|EFB13045.1| hypothetical protein PANDA_014794 [Ailuropoda melanoleuca]
          Length = 1843

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 131  LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             A ++Y  A  K       E M      R     +L     +  D   A+ +A+KAL++ 
Sbjct: 1290 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1349

Query: 185  PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            P +     A  +    +++++ A+  L +  K        + +L 
Sbjct: 1350 PKSYEAFYARARAKRNSRQFAAALADLREAVKLCPTNQEIKRLLA 1394


>gi|258651504|ref|YP_003200660.1| hypothetical protein Namu_1267 [Nakamurella multipartita DSM 44233]
 gi|258554729|gb|ACV77671.1| hypothetical protein Namu_1267 [Nakamurella multipartita DSM 44233]
          Length = 336

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 11/116 (9%)

Query: 382 TQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYF----------EWKIPTKSPEYIS 431
               +   PDP+W +D    S+ W P +P +     +          +   PT     + 
Sbjct: 219 MARPVTPAPDPVWTADGPARSTPWSPPAP-TGYPGGYPAAAAWAPPADDDRPTGPQPIVG 277

Query: 432 SENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDP 487
                 +     PA+     +     +  P+    S   +    P  P   +P +P
Sbjct: 278 DRTGPGAAPPQGPAERELPRVAPVTLDKAPAADPSSGPTEIYRVPPRPDTERPQEP 333


>gi|229032045|ref|ZP_04188028.1| TPR domain protein [Bacillus cereus AH1271]
 gi|228729290|gb|EEL80284.1| TPR domain protein [Bacillus cereus AH1271]
          Length = 219

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +L+       H   A+ Y      
Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLK---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  EN    L    +  EI  +  
Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205


>gi|91217217|ref|ZP_01254178.1| tetratricopeptide repeat protein [Psychroflexus torquis ATCC
           700755]
 gi|91184560|gb|EAS70942.1| tetratricopeptide repeat protein [Psychroflexus torquis ATCC
           700755]
          Length = 684

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 6/124 (4%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
              F+N+    L    + L   + + A    E++ +    +  A+  L   S   G    
Sbjct: 187 LILFNNDKATLLNLANLYLIANRLDDAKATYELLAENLDNKVAALNGLALVSHLNGKNKE 246

Query: 173 AQRYATKALDISPDAPWVTEAV------VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           A   + KA D  P     ++        +Q  +  K+++ +   ++   K     N   A
Sbjct: 247 ALIISQKAYDSLPILKNTSDIKQTQERYIQALIWNKKYNESEELIDALLKEQPNKNWILA 306

Query: 227 ILLI 230
           +   
Sbjct: 307 LQAT 310


>gi|53804259|ref|YP_113868.1| tetratricopeptide repeat-containing protein [Methylococcus
           capsulatus str. Bath]
 gi|53758020|gb|AAU92311.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 401

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 14/148 (9%)

Query: 69  PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
           P M    LH   ++ G   L  GL+         A  + + ++   +     L  +L   
Sbjct: 100 PQMSDEQLHAIRFELGMDYLSAGLL-------DRAETVFAGLTATASHGKASLQQMLA-- 150

Query: 129 IALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE----SCRIGDLNSAQRYATKALDI 183
           I  +E+ +  A E    + +     R   +  L  E    +   G+  +A  +  +AL  
Sbjct: 151 IYQSEKDWVRAAECARSLKKFDAGQRNATLAHLLCEQAESAIARGETVAAHAHLQQALAE 210

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFL 211
            P     T    +  +  ++W+ A T L
Sbjct: 211 DPRCVRATLLKSRLALQRQQWAEAGTLL 238


>gi|21230343|ref|NP_636260.1| hypothetical protein XCC0869 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769663|ref|YP_244425.1| hypothetical protein XC_3361 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992875|ref|YP_001904885.1| Putative secreted protein [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21111896|gb|AAM40184.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574995|gb|AAY50405.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167734635|emb|CAP52845.1| Putative secreted protein [Xanthomonas campestris pv. campestris]
          Length = 562

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 82/249 (32%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +   P   E  + +   LY    +   L  A+     
Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALKEARALQGD 372

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +       LL AR L    +
Sbjct: 373 ASADDDARRDAYVLEAELHQRANDAPGELDAFARGLAAYPD----DGALLYARGLAWERR 428

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++     P +P I  
Sbjct: 429 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTAAPDNPAIVD 488

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 545 RLDPDNRAL 553


>gi|83311255|ref|YP_421519.1| hypothetical protein amb2156 [Magnetospirillum magneticum AMB-1]
 gi|82946096|dbj|BAE50960.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 1208

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 69/209 (33%), Gaps = 14/209 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R GD   A     + +++ P       A  Q   LA     A+ F      +  E +R
Sbjct: 35  ARRYGDTEPALDAYRRIIELDPSNTDALLAAAQACRLAGRPRDALLFC----LDLLEMDR 90

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                 +  +      G    ++      L    +S+       + L  +N+   AE+ L
Sbjct: 91  QHMGCRLELAEALRQIGQPDEAHAIIDILLMERPDSVQVWCGLGRLLNDENRLAGAELTL 150

Query: 284 EKIWKVNPH--PEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            +   V+P   P  A +          E  V     A+ LE          V ++++ LE
Sbjct: 151 RRALGVDPGYGPAWAALGRILARRGEGEAAVDAFHAAITLEPEQPAH---QVGLAEVLLE 207

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
               D+A      A+ +   +     +A+
Sbjct: 208 AHRTDEAAEHINRALALD-DECAAAHMAR 235


>gi|332668078|ref|YP_004450866.1| hypothetical protein Halhy_6171 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332336892|gb|AEE53993.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 423

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 82/223 (36%), Gaps = 23/223 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKL-EMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYA 177
           +L   Q+ + +R+   A ++L + + + P +    R  A+  +  +     +  +A   A
Sbjct: 4   HLDRAQLLMEQRRLPEAEKELAQALQENPESGSVFRLLALCKIMGQ-----NYPAALAPA 58

Query: 178 TKALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
            KAL + PD P      AVV  Y    +  +A + +                 +   + E
Sbjct: 59  QKALALDPDDPSNHYILAVVYFYNNQSD--QAKSLIRSGLNLNP-----YMPNMFELAGE 111

Query: 236 NADKGDM-IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
            A   D    +  +A + L++           A++L+  N+  +AE  +      +PH  
Sbjct: 112 IAMHEDRWEEALFNAEKGLEIDPEDTELVNLRARALLKLNRTAEAEATMNYALYTDPHNS 171

Query: 295 IANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           +++    +  +   N    +        +N ++  +   + + 
Sbjct: 172 MSHANQGWVAVNQNNFEQAIASFKEALRLNPQNNHARAGLKEA 214



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 7/164 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q  +  +    A   L Q  +   E      +L + + +      +  A+   A ++L L
Sbjct: 9   QLLMEQRRLPEAEKELAQALQENPESGSVFRLLALCKIMGQ----NYPAALAPAQKALAL 64

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV--GKLK 312
             +        A      N+  +A+ ++     +NP+ P +  +   +          L 
Sbjct: 65  DPDDPSNHYILAVVYFYNNQSDQAKSLIRSGLNLNPYMPNMFELAGEIAMHEDRWEEALF 124

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            A +  EI+ E  E + + ++  L++    +A A    A+   P
Sbjct: 125 NAEKGLEIDPEDTELVNLRARALLKLNRTAEAEATMNYALYTDP 168


>gi|312373067|gb|EFR20893.1| hypothetical protein AND_18345 [Anopheles darlingi]
          Length = 501

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 15/166 (9%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG------DLNSAQRYATK 179
             Q   +  +Y+ A         +         +L     +            A  +   
Sbjct: 309 MAQFLYSTGKYDKAI-YF-----VQKACFLKPRNLEALILKAEILLQLKKNQQAIAHLRY 362

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A   +P    + + +V  Y+       A   +   K         R ++L+AR+    D+
Sbjct: 363 AQQFAPYRYEIHKVLVDSYLNMGRLREAQ--VQALKAVKMIGETARMLVLLARTY-MKDR 419

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                +    I++L + +N + A    A+    +N    +  +L+K
Sbjct: 420 TTRPKAKALFIKALGINENYLPAVYLLAELYQRENDVASSMELLKK 465


>gi|307154400|ref|YP_003889784.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306984628|gb|ADN16509.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 291

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 65/204 (31%), Gaps = 17/204 (8%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +  R     +A   A  +  ++P        +   Y+  +E+   I  LN+        
Sbjct: 52  IQLVRFQQPEAALSRAKLSTQLAPGHFQTWFILGTLYIQQEEFDAGIDALNRALA----L 107

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK------ 275
               A +          +GD   +     + LKL  ++  A      S     K      
Sbjct: 108 EPKEAGIFFTLGSAYFQRGDYQTAIAQIDKGLKLKPDNPAALFDLGNSYYKLQKYPKAVE 167

Query: 276 -KRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
             +KA  + +K W     P I N+        +  G +K+      I+KE  E  + ++ 
Sbjct: 168 AYQKAVSVDKKFW-----PAINNMGLIKYEQGDLAGAIKQWQAAVAIDKEQAEPQLALAV 222

Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357
                G   +    A  A+ +  R
Sbjct: 223 ATYAQGRQQEGLKMAEAALTLDSR 246


>gi|293399416|ref|ZP_06643569.1| periplasmic protein [Neisseria gonorrhoeae F62]
 gi|291609985|gb|EFF39107.1| periplasmic protein [Neisseria gonorrhoeae F62]
          Length = 617

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 129 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 182

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 183 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 242

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 243 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 295

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 296 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 350

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 351 YADRRDYAKVRQWLKK-VSAP 370


>gi|296810960|ref|XP_002845818.1| stil [Arthroderma otae CBS 113480]
 gi|238843206|gb|EEQ32868.1| stil [Arthroderma otae CBS 113480]
          Length = 577

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 45/153 (29%), Gaps = 12/153 (7%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A    +  L    T E           R      A+  A K   + P+       
Sbjct: 343 GDLATAISNYQKSLTEHRTPEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARE 394

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +  +     +W  A+    +  K A + +R        R+           +  D  E++
Sbjct: 395 LGNKKFKEADWPGAVEAYTEMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAI 450

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           K     I A +  A++L +  +  K   +  + 
Sbjct: 451 KRDPKFIRAYLRKAQALFAMKEYNKCLDVCTEA 483


>gi|332088000|gb|EGI93125.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82]
          Length = 1093

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R  + ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632


>gi|325925710|ref|ZP_08187086.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans
           91-118]
 gi|325926864|ref|ZP_08188146.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans
           91-118]
 gi|325542765|gb|EGD14225.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans
           91-118]
 gi|325543879|gb|EGD15286.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans
           91-118]
          Length = 421

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 107/361 (29%), Gaps = 31/361 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   Y  +    L IL   L    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K   +KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYFE----SCRIGDLNS 172
            L     V++A A      A    + + +   T          L  +    +    D  +
Sbjct: 120 ALAS--AVRVADARDDEAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINALDSAN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +   A                   A   L   ++ A       + L    
Sbjct: 178 AQPLPARGLLLRTHA----------LAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATL 227

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291
           + +   +     +  +  E+L     +  A + A A+     +    A   LE+      
Sbjct: 228 AEQTLLQASDANALAERWEALPKTLRTTPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQW 287

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +Y  L  E    +   A R      +S   L+ ++++A       QA      A
Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347

Query: 352 M 352
           +
Sbjct: 348 I 348


>gi|292493729|ref|YP_003529168.1| thioredoxin [Nitrosococcus halophilus Nc4]
 gi|291582324|gb|ADE16781.1| thioredoxin [Nitrosococcus halophilus Nc4]
          Length = 287

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 55/134 (41%), Gaps = 8/134 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK--- 285
           L+ ++      G      H   ++ ++   + + S+  A +L+ Q K  KAE +L+    
Sbjct: 119 LLEQAQTALAAGQEEQGLHLLHKAAEIDPENYLVSVALAGALLKQGKMTKAEQMLKALPL 178

Query: 286 -IWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSID 342
            +    P    +A I    L+E          RL + N E  E+  ++ ++ AL  G   
Sbjct: 179 EVRGEEPASGLLAQIEFATLTEKAPDIHSLKQRL-KANPEDSEARYLLGAQQAL-AGDYQ 236

Query: 343 QAHAKAMLAMKIAP 356
            A  + M+ +K  P
Sbjct: 237 DALEQFMVLLKQNP 250


>gi|220904159|ref|YP_002479471.1| hypothetical protein Ddes_0886 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868458|gb|ACL48793.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 207

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 53/180 (29%), Gaps = 35/180 (19%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A        A+    +              L   + R  D  +A+     A+  SP    
Sbjct: 17  AEIAENEQCANHYYNL-------------GLALLTKR--DFIAAEEAFLNAVRNSPHLAE 61

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSLENADKGDMIASY 246
               +    +   +       L+   +  +E    RA   +     +  +  +G+   + 
Sbjct: 62  GYVQLGGICLERGD-------LDGCLRYNEEATNCRAKFPVPWSNIAFVHLQRGEPDKAI 114

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKR----KAEVILEKIWKVNPHPEIANIYTHL 302
               ++LK   N + A    A +   +   +    +   I++K       P  A  + +L
Sbjct: 115 TALNKALKWDPNFVQAQNALATAYFMKGDIKACEAQCLSIIKKE------PAFAPAWNNL 168



 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 8/147 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-- 186
             L +R +  A E     ++           L       GDL+   RY  +A +      
Sbjct: 35  ALLTKRDFIAAEEAFLNAVRNSPHLAEGYVQLGGICLERGDLDGCLRYNEEATNCRAKFP 94

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            PW   A V       +  +AIT LN+  K    + + +  L  A  +    KGD+ A  
Sbjct: 95  VPWSNIAFVHLQRGEPD--KAITALNKALKWDPNFVQAQNALATAYFM----KGDIKACE 148

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQ 273
              +  +K       A    A +   Q
Sbjct: 149 AQCLSIIKKEPAFAPAWNNLALAYFDQ 175


>gi|207722030|ref|YP_002252468.1| tpr domain protein [Ralstonia solanacearum MolK2]
 gi|206587204|emb|CAQ17788.1| tpr domain protein [Ralstonia solanacearum MolK2]
          Length = 266

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 83/226 (36%), Gaps = 27/226 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A KAL I PD      ++    +   +W      L Q    A E N   AI     
Sbjct: 17  AKMAARKALQIEPDLGEAYASLAHVRLHDWDWVG----LEQDFLRAIELNPGHAIAYYWY 72

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +      G    +     +S ++   + + +   A  L    +  +A   L +  +++P 
Sbjct: 73  AEYLMAAGRAEEAIARVRQSRQMDPLNSVLNSSVAIILYLARRYDQAREELHQALEIDPN 132

Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               H  +  +Y      ++ + ++++A+ L      S E+L  +++       +  A  
Sbjct: 133 HFLLHFRLGLVYQQQKLFDDAIAEMQKAVTLSGR---STEALTGLAQT-YAAADMRAAMQ 188

Query: 347 KAMLAMK-------IAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           + + A++       + P       +A++   +  + ++   W + A
Sbjct: 189 QIVDALENASEKHYVHPYN-----MARV-FGSLGDQEQTFGWLEKA 228


>gi|169796978|ref|YP_001714771.1| hypothetical protein ABAYE2977 [Acinetobacter baumannii AYE]
 gi|260555731|ref|ZP_05827951.1| tetratricopeptide repeat family protein [Acinetobacter baumannii
           ATCC 19606]
 gi|301511991|ref|ZP_07237228.1| hypothetical protein AbauAB05_10435 [Acinetobacter baumannii AB058]
 gi|301594463|ref|ZP_07239471.1| hypothetical protein AbauAB059_01590 [Acinetobacter baumannii
           AB059]
 gi|169149905|emb|CAM87798.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii AYE]
 gi|260410642|gb|EEX03940.1| tetratricopeptide repeat family protein [Acinetobacter baumannii
           ATCC 19606]
          Length = 569

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 44  DQALQQSMVAEFALAYDDIPTALHNYTVLAIKSNSTTIKQRALDV-ALEYNDLQAALNIA 102

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 103 THWVVQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 162

Query: 225 RAILLIARSLENADKGDMIASYHDAIES---------------LKLCDNSIMASICAAKS 269
           R +LL A           I +    +E+               L+         +  A  
Sbjct: 163 REVLLTALRSSAEKDNPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANL 222

Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K    +K N    +A +   +        L++  ++ E N  + E
Sbjct: 223 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIESNPHAEE 282

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 283 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 336



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 389 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 446

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 447 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 488


>gi|159483807|ref|XP_001699952.1| DnaJ-like protein [Chlamydomonas reinhardtii]
 gi|158281894|gb|EDP07648.1| DnaJ-like protein [Chlamydomonas reinhardtii]
          Length = 1509

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 11/102 (10%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNA-----------KEWNRNRAILLIARSLENADKGDMIA 244
                 + ++ AI  L Q+                      A+L   RS          +
Sbjct: 851 DFRTAERWYTEAIDLLEQQLPGLGLSEQQAAALFPNLKTEVAVLYSNRSGARLMTSKPHS 910

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  DA++++ L    + A+  AA           A  ++E  
Sbjct: 911 ALADALKAMALDGKFLRAASRAATCHCRLGNFSAAHRVVETA 952


>gi|149178848|ref|ZP_01857428.1| Tetratricopeptide repeat protein [Planctomyces maris DSM 8797]
 gi|148842323|gb|EDL56706.1| Tetratricopeptide repeat protein [Planctomyces maris DSM 8797]
          Length = 757

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 11/141 (7%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-----AKEWSRAITFL 211
           +Y L     R G+  +A +   +A   +P  P     ++          + +W +AI  +
Sbjct: 534 LYFLADARERNGETEAAIKVNEEARQAAPKFP-----LLDYQHAWIYYHSHDWEKAIVQM 588

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K   E       + +  S     +G++        E L     +   +        
Sbjct: 589 QKFIKKYPEQKERVYQVKMMLSNTYVQQGEIGKGEAVLEEMLADDPENPSINNDLGYLYA 648

Query: 272 SQNK-KRKAEVILEKIWKVNP 291
            Q K   KAE ++    K  P
Sbjct: 649 DQGKNLEKAEKMIRIALKSEP 669


>gi|125574389|gb|EAZ15673.1| hypothetical protein OsJ_31084 [Oryza sativa Japonica Group]
          Length = 683

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 78/284 (27%), Gaps = 38/284 (13%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMML--QIPATREFAVY-SLY 161
           H+         N+    LL       E   + + A    +  L  + P  R   +   L 
Sbjct: 250 HAGSLLAAAGDNDDTAVLLAAFADFEERCGEPDRARAIYQHALRGEPPEPRAEELREKLL 309

Query: 162 FESCRIGDL--------NSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFL 211
               R GD            +    +A+  +P     W     +++     + +R     
Sbjct: 310 SLEKRFGDRHGVEDSIVTKRRSQYERAVTTNPLCYDAWFDLIRLEESANTGDANRIRDLY 369

Query: 212 NQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----N 258
            +              + W R   + +     E  D  D+  +     E L+       +
Sbjct: 370 RRAVANVPPAAAAAEKRHWRRYIYLWINYALFEELDAEDVARARGVYRECLRTIPHKKFS 429

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSE-NTVGKL 311
                + AA+  I       A  +L     V P P++         Y  L  +     + 
Sbjct: 430 FSNICVMAAELEIRDKNLAAARRLLGNAIGVAPRPKLSRSSHVWRSYAALEKKLGETDRA 489

Query: 312 KRALRLEEINKESVESLVI---VSKIALEMGSIDQAHAKAMLAM 352
           +    L           ++     +  ++ G +D+A       +
Sbjct: 490 RSVYDLAVSQPALDAPELVWTDYIQFEIDAGELDRARQLYERLL 533


>gi|119476379|ref|ZP_01616730.1| type 4 fimbrial biogenesis protein PilF [marine gamma
           proteobacterium HTCC2143]
 gi|119450243|gb|EAW31478.1| type 4 fimbrial biogenesis protein PilF [marine gamma
           proteobacterium HTCC2143]
          Length = 258

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 19/160 (11%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+    W  A     +  K A E + + A + +  +L   + G+   +     +++KL  
Sbjct: 48  YIRNGNWDAA----KRHLKTALEIDDSSAEVFLTMALVFQNTGEGDRAEEYYQKAIKLDP 103

Query: 258 NSIMASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLS-----ENT 307
            S  A    A  L S  +  +A   LE      ++   P       Y +L       EN 
Sbjct: 104 TSSRARNNYAVYLYSDRRYEEAVKQLELVVTDTLYDKRP-----AAYVNLGRSYMQLENL 158

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
           V       R   +NK +V     ++++  +MG   ++   
Sbjct: 159 VKAEDAFRRAYLMNKRNVSLRYQLAEVYYQMGDYPKSQQY 198


>gi|169778217|ref|XP_001823574.1| import receptor subunit tom-70 [Aspergillus oryzae RIB40]
 gi|83772311|dbj|BAE62441.1| unnamed protein product [Aspergillus oryzae]
          Length = 632

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 80/213 (37%), Gaps = 18/213 (8%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            AA +  LA   H+       +H   L ++L         ++  A +  +  + +  T  
Sbjct: 397 AAADDFELAI-SHNKDDADIYYHRAQLHFIL--------GEFAEAAKDYQKSIDLDRTFI 447

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           ++   L     ++G + SA     +++    D P V     +  +  + +S AI   ++ 
Sbjct: 448 YSHIQLGVTQYKMGSVASAMATFRRSVKNFEDVPDVYNYYGELLLDQQNFSEAIEKFDKA 507

Query: 215 KKNAKEWNRN--RAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  K+        + LI ++L     K D   + +   ++L +     +A    A+ L+
Sbjct: 508 VEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALIIDPECDIAVGTMAQLLL 567

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
            Q K  +A    E+        E+A     +++
Sbjct: 568 QQGKVSQALKYFERA------AELARTEAEIIN 594


>gi|332712129|ref|ZP_08432057.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L]
 gi|332348935|gb|EGJ28547.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L]
          Length = 1342

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 104/284 (36%), Gaps = 19/284 (6%)

Query: 104  RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYS 159
            R+       +    +   + LL+ ++A ++  + +    +E +       P T       
Sbjct: 912  RRTAICQLAKGYQDHPDTLPLLK-KLARSDNDWKVRATAIEQLAKGYKDHPDTLPL---- 966

Query: 160  LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            L   +    D +  +  A + L         T A++Q++  +   S       ++     
Sbjct: 967  LKKLARSDKDSSV-RVTAIEQLAQGYKDHRDTLALLQKWARSDNDSSVRFTAIKQLAQGY 1025

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            + +R+   LL   +  ++D      +     +  +   +++     +A+S    + + +A
Sbjct: 1026 KNHRDTLPLLQESARSDSDSWVRGKAIEQLAQGYQDHPDTLAILQESARSDTDSDVRGEA 1085

Query: 280  EVILEKIWKVNPHPE-IANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIV---SKI 334
               L K ++   HP+ +A +     S++    +     +L +  ++  ++L ++   ++ 
Sbjct: 1086 IEQLAKGYQD--HPDTLAILQESARSDSDSDVRGTAIKQLAKGYQDDPDTLPLLQQSARS 1143

Query: 335  ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
              +     +A  +     +  P      LL +  +++  +  ++
Sbjct: 1144 DTDSDVRGKAIQQLAQGYQDHPD--TLPLLQEYARSDKDSDVRV 1185


>gi|298707953|emb|CBJ30324.1| PsbB mRNA maturation factor Mbb1 [Ectocarpus siliculosus]
          Length = 831

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 83/284 (29%), Gaps = 19/284 (6%)

Query: 124 LLEVQIAL--AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL  Q      +  Y  A       +++          L  +  +I   + AQR     L
Sbjct: 346 LLSYQAKQKNMKGNYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGL 405

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           +   D P++ +A           ++A+T LN+  +   E         +A  L N     
Sbjct: 406 ENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPE----HTASWVALGLLNERNKR 461

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299
           +  +      + +    +  A +  A           A    +   KVN  P  A +Y  
Sbjct: 462 IDEARGCFQTATRNDPRNHYAWLVWAMLEKRIGSIDVAREKFKMCLKVN--PRNAKVYQA 519

Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM--GSIDQAHAKAMLAMKI 354
                    +     +      E   ++  + ++ +   +E   G+ D A +    A+  
Sbjct: 520 WGVLEASEGSIALATELFRAGLEQRPDN--TYIMQAWALMEAKQGNTDAAISLFKEAILK 577

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD--PLWIS 396
            PR         +   +  +               P   P W +
Sbjct: 578 RPRDGAVWQAYALLLKDMGDVAGARALFSKGTTQSPKHCPTWQA 621


>gi|227823431|ref|YP_002827404.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
 gi|227342433|gb|ACP26651.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
          Length = 295

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 85  YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHE 141
           Y+A    GL+     +   A   ++   Q ++ ++   +    L  Q    +  +N  ++
Sbjct: 113 YQAYANRGLVHRNMGDQQAALSDYNAALQLNSSYDVAYIGRGNLYRQANQLDNAFNDFNK 172

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            +++    P  R +    L +++    D   A    + A+ +SP +          YV  
Sbjct: 173 AIQLDTTDP--RAYHNRGLIYQA--RNDHAHAIEDFSTAISLSPSSAEPYNGRGISYVAQ 228

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            +   A +  N         N   A     ++L    +G+   +      +L+L      
Sbjct: 229 GDDDNAFSDFNTAI----NLNGKLAESWANQALIYERRGEKAKAQKSYSHALQLDPKYEP 284

Query: 262 ASICAAK 268
           A    A+
Sbjct: 285 ARAGLAR 291


>gi|148258690|ref|YP_001243275.1| hypothetical protein BBta_7517 [Bradyrhizobium sp. BTAi1]
 gi|146410863|gb|ABQ39369.1| hypothetical protein BBta_7517 [Bradyrhizobium sp. BTAi1]
          Length = 703

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 67/239 (28%), Gaps = 7/239 (2%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                 + +   A      +L           +L       G  ++A     +AL   P 
Sbjct: 149 ALALTRQGRLAEAEAAYRALLDHDPAHPDGWRALAHVLADQGRYDAAVPAYRQALAAQPA 208

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              +  ++       + ++ A    + +       +   A  L+  +L   + G    + 
Sbjct: 209 DAGLHVSLGDVLYKQRAFADAAR--HYRLAAELAPDDANAARLLGHALH--EAGRATEAI 264

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
                ++ L    ++     A  L    +   A    E    + P    A+    ++ E 
Sbjct: 265 DAYRRAVALDPTDVVVLSNLAACLCGAGQLEAAAAACEHALALQPDHAPAHTNLGIIHEK 324

Query: 307 TVGKLKRA---LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
                       R    +    +    ++      G ID A A +  A+ +AP   +  
Sbjct: 325 RGEIDAAVSAHRRAIAADPAYAKGHANLAVALRNAGDIDAALAASHRAVALAPDNALAR 383



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 56/173 (32%), Gaps = 5/173 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
              H  ++ +    +     LL         +   A +     + +  T    + +L   
Sbjct: 229 AARHYRLAAELAPDDANAARLL-GHALHEAGRATEAIDAYRRAVALDPTDVVVLSNLAAC 287

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
            C  G L +A      AL + PD       +   +    E   A++   +       + +
Sbjct: 288 LCGAGQLEAAAAACEHALALQPDHAPAHTNLGIIHEKRGEIDAAVSAHRRAIAADPAYAK 347

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             A L    ++   + GD+ A+   +  ++ L  ++ +A    A  L+     
Sbjct: 348 GHANL----AVALRNAGDIDAALAASHRAVALAPDNALARYNHAHFLLMCGDL 396


>gi|78213860|ref|YP_382639.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605]
 gi|78198319|gb|ABB36084.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605]
          Length = 400

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 10/200 (5%)

Query: 163 ESCRIGDLNSAQRYATKA-LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AK 219
           E     D     R A +A L   P  P+ +  +    +   +  +AI  L    K     
Sbjct: 174 ELLAGSDKADRLRQAMEADLQERPGDPYASAKLGGLLISEGKTDQAIPLLQSGLKQCGKA 233

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +  R   +L +  +L  +D    ++ Y  A+E       S+ A +  A  L+ Q    +A
Sbjct: 234 DAERYELLLHLGLALAPSDPVQAVSCYRQALEIPLDTRVSLGARLNLAARLMEQGNLEEA 293

Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
             + +        PE+A  + +L        +    L+   R   ++  + E     +  
Sbjct: 294 ISLTQTA--AQRAPEVALAWYNLGLMQRRRGDLAAALEAYGRALALDPNNAECHQNNAVA 351

Query: 335 ALEMGSIDQAHAKAMLAMKI 354
            L  G+ID A +  + A+K+
Sbjct: 352 QLLGGNIDAARSSFIRAIKL 371


>gi|293410964|ref|ZP_06654540.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471432|gb|EFF13916.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 1093

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQGNARLQREKLLRD 632


>gi|198284425|ref|YP_002220746.1| sulfotransferase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666205|ref|YP_002427093.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248946|gb|ACH84539.1| sulfotransferase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518418|gb|ACK79004.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 762

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 98/319 (30%), Gaps = 52/319 (16%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL+ +A    P A +       +     + LV L        + +   A   L+  L   
Sbjct: 123 GLLLLACQRFPEAERAFREALARSPECLDCLVQL--GVTLAQQGRQEDARVLLDKALDTD 180

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYAT---------------------------KALDI 183
                A++     +   GD   A+                               +A +I
Sbjct: 181 PNHAVALHHRNMLALATGDHCGAEALFRRRMHLYGENPSLLIGLGIALQEQGRLTEAEEI 240

Query: 184 SPD-------APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                        V   + Q  V  +    A  ++     +  + +  R  L        
Sbjct: 241 FRRTADTYSVHADVGHYIFQNLVAQQREREAEAYIRSAIADHPQSHSLRYPLGTL----L 296

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291
             +G    +    + +L L  + + A I + ++L       +A     +  ++ P     
Sbjct: 297 FQQGRYPETLEVLLHTLNLKPDHVDALILSGRALFQLKYVDEAVETFHRALELLPESADA 356

Query: 292 --HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
             H  ++    H+    T   +    +L E   ++  +LV ++    ++G ++ A     
Sbjct: 357 QFH--LSVALIHMGECRTAEGM--IRKLLENQPDNAAALVNLAICLEKLGEVEAAETTLR 412

Query: 350 LAMKIAPRK-EIFLLLAQI 367
            A  +AP    + + LA+I
Sbjct: 413 KAGNLAPTDLRVRVALAEI 431


>gi|170739041|ref|YP_001767696.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
 gi|168193315|gb|ACA15262.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium sp. 4-46]
          Length = 667

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 49/195 (25%), Gaps = 29/195 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   A        A       L        A++ L       G   +   +  +A  + P
Sbjct: 10  QAVAAHQSGNLAQAETLYRAFLTREPNHPVALHLLGTLLHARGRTGAGLPFLERAAALLP 69

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----------------------------- 216
               V   +         ++ A   L++                                
Sbjct: 70  LDAEVHNNLGVALNHLGRFAEAARALDRAVSLVPDDAAAQSNLGAAYRGLHRFAEARGCF 129

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                 R  A +     L   D G+   +      + +L      A +  A +L++  + 
Sbjct: 130 ARALALRPDAGVASNLGLALLDLGEGEEAAACFRRATELDPAFAQAHVHLASTLLALGRL 189

Query: 277 RKAEVILEKIWKVNP 291
            +A   +E    ++P
Sbjct: 190 PEALASIEAATALDP 204


>gi|70730340|ref|YP_260079.1| hypothetical protein PFL_2973 [Pseudomonas fluorescens Pf-5]
 gi|68344639|gb|AAY92245.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 1198

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 63/227 (27%), Gaps = 39/227 (17%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             +  YA   L   P+   +   ++   +   ++ +A   L Q ++          + L 
Sbjct: 52  EVSASYAEVLLAAHPENNELRTQLLDLLIQLGDYPKAEKHLAQWQRPDPALKAYYRLQLD 111

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A +L N+     + +  +  ++              A   +S      A           
Sbjct: 112 ALALNNSTDSAALQALAERFKAFDYKPLPSPQLERLATLALSAQAPGLA----------- 160

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA------LEMGSIDQA 344
                A+ Y  L   +     +R   L E  K    S     + A      L+     +A
Sbjct: 161 -----ADAYAELARRDPT---RREQWLPEAAKWYQASEQP-GRAADLYVQLLDASQTPEA 211

Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             + +        +    L+A     +  +           L A PD
Sbjct: 212 RRQFLQ-------QAFTTLVAA----DRGDQAV--ELLARELAAQPD 245


>gi|78049196|ref|YP_365371.1| putative cellulose synthase operon protein C [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78037626|emb|CAJ25371.1| putative cellulose synthase operon protein C [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 1509

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 72/251 (28%), Gaps = 53/251 (21%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           ++ L     + A  ++  AR++     Q     NE   ++    +  A      A     
Sbjct: 357 WQQLQQAEAARARGDLAQARQLVEQAVQ--LLPNEPAGHVALGDV-QAAGDPVAAEASYR 413

Query: 145 MMLQIP---ATREFAVYSLY---------------------------------------F 162
             L      A     +  LY                                        
Sbjct: 414 KALSREADNAGALQGLVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARAR 473

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEW 221
           +    GD  SAQ     A+   P   W+   + + Y  A    +A + ++     +  + 
Sbjct: 474 QFLDGGDAVSAQTELEAAMVERPGDAWIRLDLARLYQQAGRPDQARSVMDGLLAVHGDQP 533

Query: 222 NRNRAILLIARSLENADKGD------MIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               A  L+A+   +             A+   A+  L+     I      A+ L++Q +
Sbjct: 534 EALHANALLAQESGDWQDAYDSLDRIPSAARTPAMAQLR-ATAWIELQARQARQLVAQGR 592

Query: 276 KRKAEVILEKI 286
             +A+ +L + 
Sbjct: 593 VGEAQQLLART 603


>gi|218706052|ref|YP_002413571.1| hypothetical protein ECUMN_2869 [Escherichia coli UMN026]
 gi|293405990|ref|ZP_06649982.1| yphG protein [Escherichia coli FVEC1412]
 gi|298381790|ref|ZP_06991389.1| yphG protein [Escherichia coli FVEC1302]
 gi|300898340|ref|ZP_07116688.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
 gi|218433149|emb|CAR14045.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|284922499|emb|CBG35586.1| putative TPR-domain protein [Escherichia coli 042]
 gi|291428198|gb|EFF01225.1| yphG protein [Escherichia coli FVEC1412]
 gi|298279232|gb|EFI20746.1| yphG protein [Escherichia coli FVEC1302]
 gi|300358002|gb|EFJ73872.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
          Length = 1093

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G+ ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQGNARLQREKLLRD 632


>gi|212275248|ref|NP_001130560.1| hypothetical protein LOC100191659 [Zea mays]
 gi|194689480|gb|ACF78824.1| unknown [Zea mays]
          Length = 558

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 41/188 (21%)

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ-- 113
           I+L A+ R             +KR    G++     L ++A     L R+  +  S    
Sbjct: 360 IVLTALLRA---GETSAAWQTYKRMERAGFEVDGRALDTLARG---LCRRCATDASALGD 413

Query: 114 --------HTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
                       +E +   Y L  Q      + + A   LE M++               
Sbjct: 414 AEEVFGKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRK---------GYALR 464

Query: 164 SCRIGDLNSAQR---YATKALDI----------SPDAPWVTEAVVQQYVLAKEWSRAITF 210
                D+  A      A  AL +           P      EA++ +      W+ A+T 
Sbjct: 465 KRAYTDVVRALCDRGRARDALQVLVLVMIVRDFVPGRN-AFEALLGELSRQGRWADAMTV 523

Query: 211 LNQKKKNA 218
                K  
Sbjct: 524 YAAAVKRG 531


>gi|309792538|ref|ZP_07687001.1| ATP-dependent DNA helicase RecQ [Oscillochloris trichoides DG6]
 gi|308225441|gb|EFO79206.1| ATP-dependent DNA helicase RecQ [Oscillochloris trichoides DG6]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 5/124 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
           + E L  LL   +   +     A E+   +         AV  L   +   GD  +A+  
Sbjct: 103 NQELLAGLLRGDLLHTQGDLEGATEQYRAVALRDLQGMAAVRRLAELALEQGDPEAARGQ 162

Query: 177 ATKALDISPDAPWV---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
              AL + PD        + ++Q   L  + + A   L  +  + +  +R + +  +   
Sbjct: 163 ID-ALMLRPDFTPSIADLQILLQAAELQADTTSA-EALRAQLADLELADRGKVLAELGMR 220

Query: 234 LENA 237
           LE A
Sbjct: 221 LERA 224


>gi|255037520|ref|YP_003088141.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
 gi|254950276|gb|ACT94976.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
          Length = 562

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 85/309 (27%), Gaps = 50/309 (16%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-- 145
           L   L++    N  +   +           +E   ++L   I          +++L+   
Sbjct: 204 LAEMLIA----NDRIVEAVAPLEEALKINPDEAQAHVLLADIYRRNGDVQKCNQELKQVF 259

Query: 146 ----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
               +   P  R  +            ++N A   A +  +  P+    T          
Sbjct: 260 ANPNLDADPKIRVLS--GYLTMLKTENEVNEAISLARQLSETHPNEAKATVIYADLLTRQ 317

Query: 202 KEWSRAITF-LNQKKKNAKEWNRNRAIL--------------LIARSLEN---------- 236
            +++ A    +     +   +    AIL                 ++LE           
Sbjct: 318 SKFAEARDLYIKAAAADPNVFQVWGAILQLDGQLNQPDSMLVHSEKALELFPNQGMFWYF 377

Query: 237 -----ADKGDMIASYHDAIESLKLC---DNSIM-ASICAAKSLISQNKKRKAEVILEKIW 287
                  K +   +     ESLK+       +         +        K++   E   
Sbjct: 378 NGMANLMKKNFREATSALEESLKMMGENPQLVPLIHAQLGDAFNGIGDHEKSDAAYELAL 437

Query: 288 KVNPHPEIA----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           K +P+ +      + +  L  E     LK + +L + ++ +   L   + +        +
Sbjct: 438 KADPNNDHVLNNYSYFLSLRKEKLDLALKMSEKLVQQHQNNPTYLDTHAWVLYIRKDYKK 497

Query: 344 AHAKAMLAM 352
           A      AM
Sbjct: 498 AKEYLEKAM 506



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 85/278 (30%), Gaps = 39/278 (14%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175
             +   + L     +   +Y+ A    +    I     F    L    + R     +AQ 
Sbjct: 59  PQDATTHYLVATALIKLEKYDEAINASKKAFDIDKENIFYAQQLAELYAKRRKYAEAAQI 118

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--------------KKKNAKEW 221
           Y    +  +P+       +   YV   ++ +AI   N+              K++     
Sbjct: 119 Y-ETLVARNPENIEYGIELAAVYVFNDQFDKAIETYNRLEKSMGVTEEITHQKQQLYLRQ 177

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAI----------------ESLKLCDNSIMASIC 265
           N     L   + L  A+ G++      A                 E+LK+  +   A + 
Sbjct: 178 NNLEKALAEGKKLIEAEPGEVSYRVELAEMLIANDRIVEAVAPLEEALKINPDEAQAHVL 237

Query: 266 AAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTHLLSENTV--GKLKRALRLE 318
            A         +K    L++++       +P   + + Y  +L         +  A +L 
Sbjct: 238 LADIYRRNGDVQKCNQELKQVFANPNLDADPKIRVLSGYLTMLKTENEVNEAISLARQLS 297

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           E +    ++ VI + +        +A    + A    P
Sbjct: 298 ETHPNEAKATVIYADLLTRQSKFAEARDLYIKAAAADP 335


>gi|229822938|ref|ZP_04449008.1| hypothetical protein GCWU000282_00230 [Catonella morbi ATCC 51271]
 gi|229787751|gb|EEP23865.1| hypothetical protein GCWU000282_00230 [Catonella morbi ATCC 51271]
          Length = 422

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 4/156 (2%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           LV  LE QI     Q     + L+ ++Q   TR      L       GD + A+ Y    
Sbjct: 105 LVQWLEAQILFELGQVKACQKVLQNLIQTYPTRFEPYQLLAQAKIEEGDYSKAKDYYQ-- 162

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENAD 238
           + +   +  V  A+++Q +LA      +  L   Q   + K+     A      +L    
Sbjct: 163 VLLDYFSDKVDRALIRQRLLALALEDEMIQLEWIQSLVSWKDLPLVSAEDYYLLALAYQK 222

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            G +  +Y  A ++L L  +S+     AA+  +   
Sbjct: 223 AGHLALAYEAAQQALALDLDSVDIHYLAAELALGLG 258


>gi|254522622|ref|ZP_05134677.1| cellulose synthase operon C domain protein [Stenotrophomonas sp.
           SKA14]
 gi|219720213|gb|EED38738.1| cellulose synthase operon C domain protein [Stenotrophomonas sp.
           SKA14]
          Length = 1193

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 111/332 (33%), Gaps = 29/332 (8%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
            +   ++        + +  A +     +     ++           L +   AL   + 
Sbjct: 329 RQGRREQAITYFQRAVQATPAGDSNDKWRDLIASTRYWL-------QLDQADAALKAGRL 381

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           + A        +       AV  L   +   GD  +A+R    A  I+P+   V   +VQ
Sbjct: 382 DEAERLYAQARRQQPRDVNAVLGLVDVAVARGDDAAAERQLQSARRIAPNDANVVRKLVQ 441

Query: 197 QYVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            Y        + +  A+    +K   A++  + +   L  R  +    GD   +     +
Sbjct: 442 LYGRTDPQRLEAFINALPAAQRKL-YAEDLRQLQITRLRERREQALAAGDAATAIALGTQ 500

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGK 310
                      +      L +  ++++A+ ++  + + N     A   Y   L  +   +
Sbjct: 501 LRAELPEDAWLAYALGNELRAAGREQEADAVVADMARRN---GSAEARYAQALYLSGSDR 557

Query: 311 LKRALRLEEINK---ESVESLVIVSKIA--------LEMGSIDQAHAKAMLAMKIAPRKE 359
           L +AL + +         +   + +++          E+ +  +      L ++  P  +
Sbjct: 558 LPQALAVLDALPQAQWDDDIRALSARLHRQQLTDHLWELRAQGREAEAIALLLQQPPSTD 617

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             +LLA+  +    +  + L++ Q  L A PD
Sbjct: 618 NDMLLAEWAR-LRGDHAQALHYYQRVLAAQPD 648


>gi|194896336|ref|XP_001978459.1| GG19598 [Drosophila erecta]
 gi|190650108|gb|EDV47386.1| GG19598 [Drosophila erecta]
          Length = 613

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 7/130 (5%)

Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +   L     R  +   A      A  + P    V   +   Y+  K +  A    N   
Sbjct: 348 LRGRLLISLERHKEAAEA---FRTAQTVVPYRFEVYRGLFHSYLAQKRFKEAHAICNWTL 404

Query: 216 KNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +     N  R++ +  R+L  + D      +   A +SLK+  N   A    A     + 
Sbjct: 405 R--IFRNSPRSLTMFGRTLFHSPDPKIKKTARKFAEKSLKIDPNYTPAVALMADICQLEG 462

Query: 275 KKRKAEVILE 284
             + +  +LE
Sbjct: 463 ATQTSIKLLE 472


>gi|158522426|ref|YP_001530296.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511252|gb|ABW68219.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 686

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 11/201 (5%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     + GD + A  Y ++AL++ PD      A+   +    ++  A+    +  K+ 
Sbjct: 455 GLLL--IKGGDTDRAVPYFSRALEVKPDFFDARYALANVFFNKNDFENALNHYIRILKDR 512

Query: 219 KEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           +       A       +  A +  +  +    +E+L L      A       L S+ +  
Sbjct: 513 ETAPAGLLADTHNDMGVIYAHRKKIDVAESHFLEALSLNPGLAAAHNNLGLLLSSRGETG 572

Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES-LVIV 331
           +AE        + P        +  +Y     E          RL     +S  S    +
Sbjct: 573 RAEDHFRSAMALTPGFLDAANNLVALYR--TQEKYAEAAGLLERLLAERPDSAASIAYNI 630

Query: 332 SKIALEMGSIDQAHAKAMLAM 352
           + +         A      A+
Sbjct: 631 ACLYAVQNDRTAAIMWLERAL 651



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 33/245 (13%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
              +   A    T+AL I+P  P     +    +   +  RA+ + ++  +   ++   R
Sbjct: 426 ERKNYACAHEQITEALRINPYLPQANYNMGLLLIKGGDTDRAVPYFSRALEVKPDFFDAR 485

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA------AKSLISQNKKRKA 279
                A +    +K D   + +  I  LK  +    A + A            + K   A
Sbjct: 486 ----YALANVFFNKNDFENALNHYIRILKDRET-APAGLLADTHNDMGVIYAHRKKIDVA 540

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM- 338
           E    +   +N  P +A         N +G L  +       ++   S + ++   L+  
Sbjct: 541 ESHFLEALSLN--PGLAAA------HNNLGLLLSSRGETGRAEDHFRSAMALTPGFLDAA 592

Query: 339 ----------GSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTDKILYWTQSAL 386
                         +A       +   P     I   +A +    + +    + W + AL
Sbjct: 593 NNLVALYRTQEKYAEAAGLLERLLAERPDSAASIAYNIACLYAVQN-DRTAAIMWLERAL 651

Query: 387 HAMPD 391
            +  D
Sbjct: 652 SSGFD 656


>gi|148256897|ref|YP_001241482.1| SPINDLY family O-linked N-acetylglucosamine transferase
           [Bradyrhizobium sp. BTAi1]
 gi|146409070|gb|ABQ37576.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. BTAi1]
          Length = 739

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 7/194 (3%)

Query: 70  AMLFHMLHKRNYDKGYKAL-YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
               +   ++ + K   AL    + +  +     A+ +   +      H + L +LL V 
Sbjct: 8   RAFQNARLQKKHRKQADALMPQAVAAYRSGRRAEAQAICGQILALLPDHVDAL-HLLGV- 65

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL   Q ++A + L   +++      A+ +L            A++   +A+ + P+  
Sbjct: 66  TALDGGQLDLAEQALAKAVEVDPRHAEALSNLGLALFSRKRFEEARKCQERAVTLKPNLV 125

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +    +       A+   ++      ++    A     R +          +   
Sbjct: 126 VAQTGLGNTLMRLGRPDEAVAAHDRAIALKPDY----ADAYCNRGMALLTLNRNAEANQS 181

Query: 249 AIESLKLCDNSIMA 262
              +L L    + A
Sbjct: 182 FDRALSLNPRHMEA 195


>gi|320105202|ref|YP_004180793.1| CheW protein [Isosphaera pallida ATCC 43644]
 gi|319752484|gb|ADV64244.1| CheW protein [Isosphaera pallida ATCC 43644]
          Length = 980

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +  R  A   +    ++  KG +  +Y     +L++  + + A      +L++Q++  +
Sbjct: 58  PQRKRGYAEAYLTLGQDHLVKGRLDEAYKALRRALEIKSSLVEAQPALGFTLLAQDRAEE 117

Query: 279 AEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
           A V+L  +W+    P  A        L++E       R     E N +  E    ++ + 
Sbjct: 118 ASVVLAALWESGFDPASALNGLGLLDLMAERLQDARDRFHEAAERNPQRPEPRSNLA-VC 176

Query: 336 LEMGSIDQAHAKAMLAMKIA 355
           L     D+        ++  
Sbjct: 177 LAFQGRDEEARDLWNQLRTE 196


>gi|291240441|ref|XP_002740127.1| PREDICTED: super sex combs-like [Saccoglossus kowalevskii]
          Length = 575

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 8/116 (6%)

Query: 125 LEVQIALAERQYNIAHEKL-EMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           L  Q    ++QY+ A E   + M   P   T       L     +  D+++A +   K+L
Sbjct: 448 LFAQALNDQQQYSQADEMFLKAMKLEPENPTTYV-HRGLLMLQWKQ-DVDTAVKLMKKSL 505

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
           +I     +  E +    V       AI    +             +  +   L+ A
Sbjct: 506 EIDDKCDFAYETLGTIEVQRGNLEHAIQLFEKAI---DLARTEMEMAHLYSLLDAA 558


>gi|270291291|ref|ZP_06197513.1| TPR repeat-containing protein [Pediococcus acidilactici 7_4]
 gi|270280137|gb|EFA25973.1| TPR repeat-containing protein [Pediococcus acidilactici 7_4]
          Length = 423

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 13/159 (8%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDI 183
                A  ++  A    E +     T +     L  E     ++ ++  AQ    K +D+
Sbjct: 183 AASYAASGKFEKAIAYYEQIHDEDLTPDI----LMQEGITYLQLNEVQRAQTVLEKVVDM 238

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                 V   ++  Y   +EW + +T   +    A ++N +  +L    +    D   + 
Sbjct: 239 DSSYSSVYPYLIDAYRRDEEWDKGLTAAQEGL-AADQYNPDLYLLAAEMAEHAHDDELVE 297

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                A+E   L  ++  A I        Q   R AE +
Sbjct: 298 KYLQKAVE---LAPDNQAAIIRITDFYNRQG--RYAETL 331


>gi|238752477|ref|ZP_04613953.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia rohdei
           ATCC 43380]
 gi|238709326|gb|EEQ01568.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia rohdei
           ATCC 43380]
          Length = 249

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+     A + LE  +        A   + F   RIG+ ++A++   +A+
Sbjct: 35  TRLQLGLEYLAQGDLKAARQNLEKAVAADPQDYRAQLGMAFYEQRIGENDAAEQRYQQAM 94

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +    +        ++         A++ D
Sbjct: 95  KLAPGNGTVLNNYGAFLCSLGQYVPAQQQFSAALLSPDYGQVADSLENAGYCFLRANQND 154

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 155 --QARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194


>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 440

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 133 ERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISP--DAP 188
           + +Y+ A E  +  +++  T         +       G  + A     +A+ + P   A 
Sbjct: 207 QGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLA--DQGKHDEAIEAYDEAIRLDPTDAAV 264

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           W  + V    V   ++  AI   ++  +         A     + +  AD+G    +   
Sbjct: 265 WGNKGV--SLVDQGKYDEAIEAYDEAIRLDPA----NAAAWGNKGVSLADQGKYDEAIEA 318

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
             E+++L      A      SL  Q K  ++    ++  ++N  P++A  + 
Sbjct: 319 YDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIRLN--PDLAEPWI 368



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 8/156 (5%)

Query: 133 ERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           + +++ A E  +  +++  T         +       G  + A     +A+ + P     
Sbjct: 241 QGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSL--VDQGKYDEAIEAYDEAIRLDPANAAA 298

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                       ++  AI   ++  +         A     +      +     S     
Sbjct: 299 WGNKGVSLADQGKYDEAIEAYDEAIRLDPT----DATAWFNKGNSLNKQKKYDESIKAYD 354

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           E+++L  +     I    SL  Q K  +A    ++ 
Sbjct: 355 EAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQAYDEA 390



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 81/232 (34%), Gaps = 15/232 (6%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           + +Y+ A E  +  +++  T   A ++      +    + + +   +A+ ++P       
Sbjct: 105 QGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWI 164

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              +      ++  AI   ++  +               + +  AD+G    +     E+
Sbjct: 165 GKGKSLADQGKYDEAIEAYDEAIRLDPA----NVAAWGNKGVSLADQGKYDEAIEAYDEA 220

Query: 253 LKLCDNSIMASICAAK--SLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-----LLSE 305
           ++L      A++   K  SL  Q K  +A    ++  +++P    A ++ +     +   
Sbjct: 221 IRLDPT--DAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTD--AAVWGNKGVSLVDQG 276

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                ++       ++  +  +         + G  D+A      A+++ P 
Sbjct: 277 KYDEAIEAYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPT 328


>gi|217978433|ref|YP_002362580.1| TPR repeat-containing protein [Methylocella silvestris BL2]
 gi|217503809|gb|ACK51218.1| TPR repeat-containing protein [Methylocella silvestris BL2]
          Length = 291

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 12/177 (6%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P++          Y  +  ++ AI   +Q  K A       A  L  R+L     G   
Sbjct: 72  NPNSADAYNTRGVAYAKSGRYNEAIADFSQAIKIAPT-----AASLTNRALAYRQIGRND 126

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---- 299
           A+  D   ++    N   A +  A    +      A   L+   K+N  PE A  +    
Sbjct: 127 AALTDFNSAIAADANHAPAYLGRANLERASGDLPAAHADLDSAIKLN--PENAQAFHARG 184

Query: 300 -THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
             +    N    +       + +  +    +   +  + +G  D+A      A+ + 
Sbjct: 185 LIYQREGNHPQAITDFDNAIDRDPFAGAPYLARGQSLIAIGKYDKAIEDFNAALNVD 241


>gi|117923609|ref|YP_864226.1| hypothetical protein Mmc1_0293 [Magnetococcus sp. MC-1]
 gi|117607365|gb|ABK42820.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 789

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 58/195 (29%), Gaps = 4/195 (2%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G++N A      A  + PD P    A+ Q+         A   L Q  +   E       
Sbjct: 124 GEVNGALSCWAHAYRLQPDNPQPLRAMAQRLEQQGRIQEATEQLQQLAQMLPEDLDLLLH 183

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+                    +E       S       A  L+ Q    +AE +  +  
Sbjct: 184 LVGLLKQIGKHTAAEAYLRQRLVE----HPQSQPLRFALANLLMDQGNLAEAETLFRQNL 239

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
             +   ++     +         L        +    + +   ++ + L++G +D+A A 
Sbjct: 240 PDHLLSQLNLGVIYGRQGRYTEALHLFRHANAVTPNHLFTGYNLAVLCLQIGQLDEAQAL 299

Query: 348 AMLAMKIAPRKEIFL 362
              A+   P++    
Sbjct: 300 LEQAIAHHPQQVALR 314



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 38/137 (27%), Gaps = 9/137 (6%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL  Q          A       L      +  +  +Y    R G    A      
Sbjct: 217 ALANLLMDQ-----GNLAEAETLFRQNLPDHLLSQLNLGVIYG---RQGRYTEALHLFRH 268

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A  ++P+  +    +    +   +   A   L Q   +  +    R  L    + +    
Sbjct: 269 ANAVTPNHLFTGYNLAVLCLQIGQLDEAQALLEQAIAHHPQQVALRNTLGQVYARQ-LKF 327

Query: 240 GDMIASYHDAIESLKLC 256
              I  +H A++    C
Sbjct: 328 TQAIQCFHAALQQQPQC 344


>gi|327440766|dbj|BAK17131.1| FOG: TPR repeat [Solibacillus silvestris StLB046]
          Length = 414

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRI 167
                  +E L+   + ++     ++  A    E +  I   +   +  L     E  R 
Sbjct: 122 DALQILPHEPLLQFAKAELLFETGRFTEAVRIYEELYAIDK-KFAGII-LAQRLAEVYRA 179

Query: 168 GD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           G    +A  Y  +AL+    A  +  +    +   +++  AI  L   K+   ++    A
Sbjct: 180 GAGYETALDYYMEALEEEVTADLLFGSAYAAF-QTEKYELAIKQLEDLKELDPDY--FAA 236

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            LL+A S    +  D   +     E LK  +      + A K  I   K+++A   L + 
Sbjct: 237 YLLLAESYAMLE--DNERALKVIKEGLKRDEYDKSLYLFAGKMAIKNGKQQEAVEFLSEA 294

Query: 287 WKVNP 291
             ++P
Sbjct: 295 IALDP 299


>gi|288963191|ref|YP_003453470.1| TPR repeat-containing protein [Azospirillum sp. B510]
 gi|288915443|dbj|BAI76926.1| TPR repeat-containing protein [Azospirillum sp. B510]
          Length = 1246

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 69/228 (30%), Gaps = 39/228 (17%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G   +A      AL  +P             +  +    A  +L +         + 
Sbjct: 646 LQNGQSTAALSCGRAALACAPQHLAAMINQGTLLMQGQRPVEAALWLRRVVALDPAVWQA 705

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSI-------MASICAAKSLISQNKKR 277
           +A LL       A+ G   A+   A  +++ C   +       +A   AA +L  +   R
Sbjct: 706 QAALL----RVLAEAGQHSAAVEAAHAAMRRCPELLLWDRDALVAVFNAAVALYRRGDAR 761

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
            A   LE + +  P                         L ++ K       ++ + A++
Sbjct: 762 TALAALEMVGQAAP------------------------DLAQLKKALCACHHMLGQQAIQ 797

Query: 338 MGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK---ILYW 381
            G +         A++I P   E+   +A +E            +  W
Sbjct: 798 AGDLGTGRHHYGAALQIDPAIAELHAAMAGLEVKERPYAAARHSLRAW 845


>gi|149919872|ref|ZP_01908348.1| adventurous gliding motility protein AgmK [Plesiocystis pacifica
            SIR-1]
 gi|149819319|gb|EDM78752.1| adventurous gliding motility protein AgmK [Plesiocystis pacifica
            SIR-1]
          Length = 3612

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 1/165 (0%)

Query: 84   GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEK 142
            GY+ L + L S+ A  +  + +  S +         Y+  LL    +  A          
Sbjct: 3277 GYRELASQLASLLAEKLDDSDRAQSILESLLEVDPSYVPALLSLASVHEARGDEESMRTT 3336

Query: 143  LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            LE    +              +    +    + +  KAL + P      + +++     +
Sbjct: 3337 LERAAALEPQGPTGARLQLRLAMLTEEAEPRRAHLEKALSLDPANVEAGKQLLELSRSEE 3396

Query: 203  EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             W +    L       K  ++ R + L    +  A   D+  +  
Sbjct: 3397 RWDQVAYLLEMAVSREKSDDKRRELQLERVDILVAKVQDIDGALR 3441


>gi|138894469|ref|YP_001124922.1| hypothetical protein GTNG_0799 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134265982|gb|ABO66177.1| hypothetical protein GTNG_0799 [Geobacillus thermodenitrificans
           NG80-2]
          Length = 220

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 16/98 (16%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-----KEWSRAIT----FLNQK 214
             +  +   A++   +AL + P+     +AV + ++         W +AI      L   
Sbjct: 9   KLKKENYRKARKLFEEALRLDPE-----DAVCRYHLGHLELYDGWWHKAIRQFQLVLQST 63

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            KN + ++  RA+   A +      GD   +     E+
Sbjct: 64  SKNLEPYHYIRALCSSAIAYNQL--GDPEKALRLLDEA 99


>gi|332306073|ref|YP_004433924.1| response regulator receiver protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173402|gb|AEE22656.1| response regulator receiver protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 547

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 66/172 (38%), Gaps = 12/172 (6%)

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLIS 272
             + +K + +  A+  +  +++  D  + IA+     +   +            A+    
Sbjct: 120 NLRLSKAYQKRLALRSVYEAMQKNDTPEAIAACRRLIMSGTRYAKT---CCRLLAELYWK 176

Query: 273 QNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
             +  +A+ +L  +    P P     +A     + + +    ++ A+ +   N    E+ 
Sbjct: 177 AGEFTQAKHMLTPLLAQKPQPWVTIALAKTEMLMTNYDAA--IELAIDMCHRNPLLYEAQ 234

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKIL 379
            I+++  L +     A      A++IAP      L+A +I +  SHN + + 
Sbjct: 235 DILAQCYLLLRDYPNALIAIERAIEIAPYSVERQLIACKIAR-ESHNYEMVK 285


>gi|330996699|ref|ZP_08320577.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329572771|gb|EGG54404.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 297

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 10/163 (6%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
            +A     +  +  +   R+ A++          +G    +       L +  + +   +
Sbjct: 63  EKAERLFREAMRI-EPAQRSNAMIYYQIGRMQEHRGKPEKALESYTMGLNVAPHVLPLRM 121

Query: 265 CAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--LRLE 318
             AK  +    K KA      +L+  WK +    +  +  ++ +   + +  RA    L 
Sbjct: 122 ARAKLYMQLGNKEKALVDYSDVLD--WKADEQEAL-FMRAYIYTGQRLYRRARADYEALL 178

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           ++N    E+ + +  +  +     +A  +    +  AP   I 
Sbjct: 179 KLNPAHEEARIGLVLLNEKDNRPREAMEQINAMVAAAPDHAIL 221


>gi|309784703|ref|ZP_07679336.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
 gi|308927073|gb|EFP72547.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
          Length = 593

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNEYL---VYLLEVQIALAERQYNIAHEKL 143
           L   ++     + P A    +   ++ H  +         L+       + QY  A E  
Sbjct: 474 LALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDF 533

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                   ++    Y L   + R G+ ++   +  ++L   P    V
Sbjct: 534 WRAAWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEV 580


>gi|301117386|ref|XP_002906421.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans
           T30-4]
 gi|262107770|gb|EEY65822.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans
           T30-4]
          Length = 1166

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 23/188 (12%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P       A     +  K++ + +  L     ++ +    R+            +G    
Sbjct: 363 PYRDESATAT---NIARKDYDK-MFTLAGNAFHSTKIPEIRSESCYLMGRGCHAQGKYKD 418

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIY 299
           +Y     + +L    ++     A+    + +  KA   LEK  K  P        + ++Y
Sbjct: 419 AYSYYFNAGRLWPKFVLPWFGLAQMYYERKEFTKAASYLEKANKAYPENVEILSLLGDVY 478

Query: 300 THL-LSENTVGKLKRALRLEEINKESVESLVIVSKIA----------LEMGSIDQAHAKA 348
             L   +  V  L+R + LE     +VE+L+  +++           + + S   A    
Sbjct: 479 GKLGKKDEAVVLLRRVVELE---PGNVEALIGTAELLHGSPERKDQIIAISSYIAAEKVM 535

Query: 349 MLAMKIAP 356
             A +  P
Sbjct: 536 NNASERVP 543


>gi|224826447|ref|ZP_03699549.1| type IV pilus biogenesis/stability protein PilW [Lutiella
           nitroferrum 2002]
 gi|224601548|gb|EEG07729.1| type IV pilus biogenesis/stability protein PilW [Lutiella
           nitroferrum 2002]
          Length = 209

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D ++ Q Y  KAL + P  P       +           + +  +   N        A L
Sbjct: 43  DGDAEQNY-QKALAMEPANPEANNNYGEFLCDHGRAQDGMGYFAKALANPLYDTPQTAYL 101

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            + R       G    +    + +L++  N   A    A     Q   + A 
Sbjct: 102 NLGRCSALL--GQKAQANDYLLSALRVSPNYPPALKELAALHFGQGNAKLAA 151


>gi|220918570|ref|YP_002493874.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956424|gb|ACL66808.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 274

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 196 QQYVLAKEW-SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              +  + W   AI   ++      E + + A      +   ++K     + ++ + +L+
Sbjct: 19  GIELADRGWLDEAIKEFHKAI----ELDPSSAHAHDNLATVYSEKKLYREALNEYLTALR 74

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVG 309
           L  +S  A    A  L +      A V  +   ++ P HP+    +           T  
Sbjct: 75  LEPDSATAHYNLASFLATHG-PDMAVVEYQDAIQLEPDHPDAHLNLGLTLAD--QGKTEE 131

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +K      E+          ++ + ++ G    A A     +++ P 
Sbjct: 132 AVKELGVAIELEPSDPFPRHELAGLLMDEGDYRAAIAHLKEVVRLEPS 179



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 80/247 (32%), Gaps = 31/247 (12%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  E    G L+ A +   KA+++ P +    + +   Y   K +  A+       + 
Sbjct: 18  RGI--ELADRGWLDEAIKEFHKAIELDPSSAHAHDNLATVYSEKKLYREALNEYLTALRL 75

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +       L    +           +  +  ++++L  +   A +    +L  Q K  
Sbjct: 76  EPDSATAHYNLASFLATH-----GPDMAVVEYQDAIQLEPDHPDAHLNLGLTLADQGKTE 130

Query: 278 KAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +A   L    ++ P      H E+A +       +    +     +  +   + E+ + +
Sbjct: 131 EAVKELGVAIELEPSDPFPRH-ELAGLLMD--EGDYRAAIAHLKEVVRLEPSNFEAELDL 187

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLL-------LAQIEQANSHNTD 376
                + G   +A      A  + P           ++ L       L  + +A + + D
Sbjct: 188 GICYAQKGFYAEAERAYARAAALKPDDLLLNYDVAALYALWGKPAPALEALRKALAQDAD 247

Query: 377 KILYWTQ 383
           K+  W +
Sbjct: 248 KVRDWLR 254


>gi|154496775|ref|ZP_02035471.1| hypothetical protein BACCAP_01068 [Bacteroides capillosus ATCC
           29799]
 gi|150274027|gb|EDN01127.1| hypothetical protein BACCAP_01068 [Bacteroides capillosus ATCC
           29799]
          Length = 348

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 24/256 (9%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQR 175
           E + ++LE+Q AL+  ++      L+  L     +  A+    SL+          +A+ 
Sbjct: 73  ERIEHMLEMQEALSTEEFRQTEAFLKGKLGEKERKSDALRLLSSLFNHK-ADELRRAAEF 131

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAK---EWSRA---ITFLNQKKKNAKEWNRNRAILL 229
           YA +AL+++P        +  Q        +W  A         ++   K  N     L 
Sbjct: 132 YAKEALELAPTVKENHNNL--QRAQEGTVPDWDWANHSRRIAYYQQFVGKNPNYLGGYLW 189

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEK 285
           +   LE       +       E+++  D+S        K    +   +KAE     +LE 
Sbjct: 190 L---LEELIADCRLEEAEKVWETVRQLDDSCRVPYYQGKIAWQRGDHQKAEAIWLRMLED 246

Query: 286 ---IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
               W    +   A  Y     +  +   KRA  L + +    ++ +  + I    G   
Sbjct: 247 YSGDWLAFANMADAMAYA-CRYDEAIRYYKRAQEL-QPSPRYTDAQMTAAHIYEIQGKYT 304

Query: 343 QAHAKAMLAMKIAPRK 358
           +A       ++I   +
Sbjct: 305 EAVESLKEQLEILKTE 320


>gi|115389426|ref|XP_001212218.1| hypothetical protein ATEG_03040 [Aspergillus terreus NIH2624]
 gi|114194614|gb|EAU36314.1| hypothetical protein ATEG_03040 [Aspergillus terreus NIH2624]
          Length = 712

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 22/195 (11%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A+   L +     V+     + +    ++  +      + + A + L+M L +       
Sbjct: 365 ANENSLRKAQDIAVNMLRENNQDPDALMIRARALYGLGESDQAVKALKMCLGLDP----- 419

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                       D+  A +       ++        A       AK++ +AI    +   
Sbjct: 420 ------------DMKPAIKLLRTVQKLTRTKEEGNAAF-----KAKDYRKAIELYGEALA 462

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                    + +L  R+    +  +   + +D  E+L+L  +   A    AK+       
Sbjct: 463 VDPNNKDMNSKILQNRAQAYINLKEYDNAVNDCTEALRLDPSYTKAQKMRAKAHGGAGNW 522

Query: 277 RKAEVILEKIWKVNP 291
            +A    + + + NP
Sbjct: 523 EEAVRDYKAVAEANP 537



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 14/126 (11%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ----------IALAERQYNIAHEKL-E 144
                  A K               +  L  VQ           A   + Y  A E   E
Sbjct: 400 GLGESDQAVKALKMCLGLDPDMKPAIKLLRTVQKLTRTKEEGNAAFKAKDYRKAIELYGE 459

Query: 145 MMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
            +   P  ++     L   +     + + ++A    T+AL + P      +   + +  A
Sbjct: 460 ALAVDPNNKDMNSKILQNRAQAYINLKEYDNAVNDCTEALRLDPSYTKAQKMRAKAHGGA 519

Query: 202 KEWSRA 207
             W  A
Sbjct: 520 GNWEEA 525


>gi|94499171|ref|ZP_01305709.1| hypothetical protein RED65_10294 [Oceanobacter sp. RED65]
 gi|94428803|gb|EAT13775.1| hypothetical protein RED65_10294 [Oceanobacter sp. RED65]
          Length = 388

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 69/210 (32%), Gaps = 10/210 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLEMMLQI-PATRE 154
             +  A  +H  +  +     +    +        L    ++ A   L  +L+     + 
Sbjct: 74  GELDKAVSIHQSLFARPDLDKDLAGQVQFALASDYLQSGLFDRAERLLLDLLKTHQNMKS 133

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             +  L        D  S    A++           +    +  Q +   EW  A ++++
Sbjct: 134 KVLDKLVVLYEEEQDWESILSLASEVKNFKNIKSVAYACCELADQSIKKHEWREAQSYID 193

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLI 271
           +  K     +      LI  +  + ++G          E+L+       +      ++  
Sbjct: 194 RALK----IDSKCIWALILEAKVHEEQGLPNKMVASLKEALQYDPAQLHVILPNLKETFE 249

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           S+++  + E ILE++W  +P P   + Y  
Sbjct: 250 SRHRPHELEQILEELWIESPMPLSLHSYAE 279


>gi|86605655|ref|YP_474418.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86554197|gb|ABC99155.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 263

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/207 (10%), Positives = 58/207 (28%), Gaps = 21/207 (10%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L  Q            +    +L+       A+  L     ++ +   A     K +
Sbjct: 52  TEQLRAQA-----------DGYRAVLEREPDNPIALRGLIDTQLQLNEPQGAIEPLKKLV 100

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           ++ P+   +   + Q      +   A+     + +   E +   + +L   +      G 
Sbjct: 101 ELEPENRQLRAFLAQIQQDTGDLEGALE----QLQILHEKDPKDSQVLQELADVQLALGR 156

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANI 298
              +       LK         +  A   +  N+  KA  + +++   +P    P +   
Sbjct: 157 PSQAIELLENYLKEVPEDNDVRLRLAFIYVRNNQTEKAVALYDEMIAADPSDFAPVLGKA 216

Query: 299 YTHLLSENTVGKLKR---ALRLEEINK 322
                + +   + K      +   +  
Sbjct: 217 IALTSATDENLRAKAPELFEQAARLAP 243


>gi|323496841|ref|ZP_08101878.1| putative Zn-dependent protease [Vibrio sinaloensis DSM 21326]
 gi|323318100|gb|EGA71074.1| putative Zn-dependent protease [Vibrio sinaloensis DSM 21326]
          Length = 483

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKES 324
              I+Q +  KA+ +LEK  K +P +P +   Y +  +  E     L+   R    N   
Sbjct: 348 DLYIAQKQADKAQQMLEKAMKASPNNPVLTINYANVLIKLEKNQEALRVLQRYTHDNPND 407

Query: 325 VESLVIVSKIALEMG--SIDQAHAKAMLAMKIA 355
           V    ++S+  + +G    D A    +LA+K  
Sbjct: 408 VNGWQLLSEANIHLGQSDEDLAARAEILALKAN 440


>gi|325107410|ref|YP_004268478.1| type II and III secretion system protein [Planctomyces brasiliensis
           DSM 5305]
 gi|324967678|gb|ADY58456.1| type II and III secretion system protein [Planctomyces brasiliensis
           DSM 5305]
          Length = 1546

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 58/337 (17%)

Query: 78  KRNYDKGYKALYTGLMSIAAHN---IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
            R   +G       +++    N    P A ++    + + +   +    L   + A+ E 
Sbjct: 216 ARRQTQGQ------MLAGNTTNNDAAPAAPRVGIDPTSEQSAKQQSQSLLAAAEKAVQEG 269

Query: 135 QYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
           +Y+ A +      Q+P T   F        +      +S    A++          V   
Sbjct: 270 RYDEARKLAGQADQLPVTYSLFDRRPEQILALIERASDSRMIVASEQKPQQASQAPVATT 329

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           V +  V              K + A   +RN+A+ L+A + +   +GD+  +     ++ 
Sbjct: 330 VPEMPVSP----------EPKVETAAAQHRNQALNLLAEARDAVSRGDLATANQKVSQAQ 379

Query: 254 KLC---------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +              IMA I A +      +++ A        +  P   I      +  
Sbjct: 380 QFDVTYTLFDDRPELIMAEINAVQKQQMLAQQQPAAAPAIGTVQAPP---IEAARAPMAG 436

Query: 305 ENTVGKLKRALRLEEI-------------------NKESVESLVIVSKI--ALEMGSIDQ 343
                K      L +                    N    ++  ++++   AL  G  + 
Sbjct: 437 NTVAAKTAAQNTLAQNTAAPKDMTPAATAQPTAANNPAKSQAHALLAQSREALSKGEYEL 496

Query: 344 AHAKAMLAMKIAPRKEIF-----LLLAQIEQANSHNT 375
           A  KA  AM+     ++F      +LA+I++      
Sbjct: 497 AREKARQAMQYDVTYDVFDVRPQQILAEIDRRGGSPA 533


>gi|298244175|ref|ZP_06967981.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
            44963]
 gi|297551656|gb|EFH85521.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
            44963]
          Length = 1298

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 47/296 (15%)

Query: 134  RQYNIAHE------KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA------L 181
             +Y  A                     +A+Y L   S    +   A+ Y  +A       
Sbjct: 924  GRYIEAEACLRSSLAFHQQKGEAQDAAWALYELAVLSREEANFVQAEAYLEEAQLNFVQA 983

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-- 239
                 + W+     +       +  A+    Q  K  ++           R L       
Sbjct: 984  QDERGSLWLALVRGELQRGYGNYRPALELFEQAVKGLRQLKDQEGYAWALRDLGATKGAL 1043

Query: 240  GDMIASYHDAIESLKLCDNS----IMASICA--AKSLISQNKK-------RKAEVILEK- 285
            G    +  D  E+L+  DN       A + A   +  + Q K        R++  + +  
Sbjct: 1044 GYYTRALTDNEEALRTFDNLNMVGAQAWVLADRGEIYLHQGKLDAAQQQGRESLRLFQAQ 1103

Query: 286  ------IWKVNPHPEIANIYTHLLSENTVGKL---KRALRLEEINKESVESLVIVSKIAL 336
                   W +     +         +    +L   +       ++    E+ V+ +  A+
Sbjct: 1104 SMLRGEGWSLR----LLGNVARARGDVEHAQLYYNEALRIFASLSDRVDEARVLNALGAV 1159

Query: 337  --EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                G   +A +    A+     + + L+ AQ         D    W +    A  
Sbjct: 1160 AYACGEYQEAQSYYEQALTRVQEQNVLLIEAQTLWGLG---DIARAW-RRFSEAEH 1211


>gi|283782175|ref|YP_003372930.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283440628|gb|ADB19070.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
          Length = 1894

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 16/143 (11%)

Query: 108 SYVSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESC 165
           +      T  +E L   L E+  AL +     A    + M    P  R         E+ 
Sbjct: 448 AEKISDLTLPDEALWNGLFELDGALIKHDRAQAEVVYQAMCTSAPDDRLT------LEAR 501

Query: 166 RI---GDLNSAQRYA--TKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           R     D N A++ A   K  +  P      W   A+++     ++  + +  + Q++  
Sbjct: 502 RRLAIYDANPAEQLAAVEKVFEQFPTSERIAWERLALLRYQTSREQRLQQLEAMAQREDA 561

Query: 218 AKEWNRNRAILLIARSLENADKG 240
           +  ++R  A  L+  +  +AD  
Sbjct: 562 SPIFSRMLADELLQDARRHADAT 584



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 79/238 (33%), Gaps = 24/238 (10%)

Query: 152  TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
            T+   + +    +  I +          A    PD      +V +Q    + +  A+   
Sbjct: 937  TQGVGLSAFAHAAQGILEPEELLAELQAARVARPDLAEAWSSVTEQLAQLERFDDALANA 996

Query: 212  NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
             Q  +          +L    +  +  + D  +       +L+L      A     ++L 
Sbjct: 997  QQACERFPLS----ILLWTDLARVHRLRLDFDSESEALANALRLDPGHSTALEMMCEALA 1052

Query: 272  SQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN-TVGKLKRALR--------- 316
             +   + A  + ++           H  +A  +  L   +  +  L++A+R         
Sbjct: 1053 RKRDLQAACDLAKRATAHASLDYLNHTILAEQWWQLKEHDRAIEALRQAIRIEPGADRAW 1112

Query: 317  --LEEINKE--SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
              L++  K+    E  + +++  L      +A +  +LA  +   +     LA IE+A
Sbjct: 1113 GNLQQWAKDLGQPEIAIDIART-LTQSRPGEARSWHVLARILDGPQHSDESLAAIERA 1169


>gi|223937604|ref|ZP_03629507.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223893767|gb|EEF60225.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 310

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 66/197 (33%), Gaps = 32/197 (16%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            ++  +++W +A        KN   WN          +    + G +  ++    +++++
Sbjct: 121 DEHAASQQWEKAREL---DPKNGASWNN--------LANYYGEHGPVKKAFEYYSKAIEI 169

Query: 256 CD----------NSIMASICAAKSLISQNKKR---KAEVILEKIWKVNP-----HPEIAN 297
                       +++      A      ++++   KA  + ++  K++P       ++A 
Sbjct: 170 DPVEPLYLSNFADTVSLFRKEAMVYYHLDEQQVFIKALGLYQQALKLDPKNFKLAQDLAQ 229

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAHAKAMLAMKI 354
            Y  +    T   L     +  +     E     + +++  L     D+A  +       
Sbjct: 230 TYYGIKPTPTDAALNAWTNVLNLAASDFEKQGVYLHLARFKLNANRFDEAREQLKDVTDE 289

Query: 355 APRKEIFLLLAQIEQAN 371
           + ++    LL  IE   
Sbjct: 290 SYQERKRSLLKNIEARQ 306


>gi|86606018|ref|YP_474781.1| photosystem I assembly protein Ycf3 [Synechococcus sp. JA-3-3Ab]
 gi|123751805|sp|Q2JUT9|YCF3_SYNJA RecName: Full=Photosystem I assembly protein ycf3
 gi|86554560|gb|ABC99518.1| photosystem I assembly protein Ycf3 [Synechococcus sp. JA-3-3Ab]
          Length = 173

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +   A +E +Y  A E       + Q    R + +Y++       G+L+ A  Y  +AL+
Sbjct: 42  DGMAAQSEGEYAEALENYREALALEQDDEDRSYILYNMGLIYQSNGELDKALEYYHQALE 101

Query: 183 ISPDAPWV--TEAVV-----QQYVLAKEWSRAITFLNQKKK 216
           ++P         AV+     +Q + A +   A    ++  +
Sbjct: 102 LNPRLCSALNNIAVLLHHKGEQSLQAGDEETAEALFDEAAQ 142


>gi|118581730|ref|YP_902980.1| hypothetical protein Ppro_3330 [Pelobacter propionicus DSM 2379]
 gi|118504440|gb|ABL00923.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
          Length = 1038

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 4/159 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           +     A E+    +        A   L            A      AL ++P+   +  
Sbjct: 567 QGSAARAEERFRQAIGYDENNVDAYRCLGLLLNEQERYEEAAFLFATALSLAPNDCDLRR 626

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +   +     ++ A  + N       +      +L +  + E  ++ D+       + +
Sbjct: 627 FLGDAHFGLGNYADAAHWYNNALSRRPD--DVEVLLNLGAASEVLNRFDVAEC--SLLRA 682

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++L      A +      +SQN+  +AE   +K  +  P
Sbjct: 683 IELSPGDHRAYLNLGGVFLSQNRLEQAERYFQKALECKP 721


>gi|108805489|ref|YP_645426.1| TPR repeat-containing protein [Rubrobacter xylanophilus DSM 9941]
 gi|108766732|gb|ABG05614.1| TPR repeat [Rubrobacter xylanophilus DSM 9941]
          Length = 268

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 24/189 (12%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPATRE 154
           + ++  A +      +   F  E     LE Q +L   + +   A + L   ++      
Sbjct: 40  SGDLRGAMEASRLAVRLDPFDAEA----LEAQASLLQQQGRSEEALDALRQAVERDPNNY 95

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
                L      +G    A+    + L+++P A   +  + Q  +   E  +A     + 
Sbjct: 96  LPHLILGNLQLSLGRFEEAEESYREVLELNPRASAASTGLAQALIRQGELEKAREIYER- 154

Query: 215 KKNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
                   R     L    L       G+    Y   + + +           AA  L  
Sbjct: 155 -----LAQRREITYLGLYDLGRLCVRTGEPEKGYRYIMRARRQ----------AAAGLDR 199

Query: 273 QNKKRKAEV 281
            +   +AE 
Sbjct: 200 LDGPARAER 208



 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 10/119 (8%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q  + + +   A E  E + Q        +Y L     R G+     RY  +A   +  
Sbjct: 136 AQALIRQGELEKAREIYERLAQRREITYLGLYDLGRLCVRTGEPEKGYRYIMRARRQAA- 194

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   +     A+     I  ++    +A       A     R+ +   + D   +
Sbjct: 195 ---AGLDRLDGPARAER-RELIESMDLALADALVVQGEYA-----RARQIIAQSDSEQA 244


>gi|328698735|ref|XP_003240719.1| PREDICTED: transmembrane and TPR repeat-containing protein
           CG4341-like [Acyrthosiphon pisum]
          Length = 822

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 71/246 (28%), Gaps = 30/246 (12%)

Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           + + + A   L   +   P   +   Y+L       GD  +A      A+   P      
Sbjct: 494 QGRLDEAETALRTALRYRPNMADV-HYNLGNLLREKGDAEAAVSSYKNAIKYRPSLAVAY 552

Query: 192 EAVVQQYVLAKEWSRAITFLN-------QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             + Q          A + L           K+      +R   L+     +AD+G    
Sbjct: 553 LNMGQLLATMGRCEEAESVLKLCSSLDGSHSKDPVNHETSRVSALVTLGKLHADRG---- 608

Query: 245 SYHDAIESLKLCDNSIMASI-------CAAKSLISQNKKRKAEVILEKIWKVNP-----H 292
            Y DA+++ K     +               +L   N+ R+AE+  +    V P     H
Sbjct: 609 RYSDAVQAYKHAVTILPPYYNSRVLFSLYGDALAQLNRHREAEMWHKAALAVGPDHVPAH 668

Query: 293 PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                      +          RA +L                  LE     +A ++ + 
Sbjct: 669 LSYGKWLAKNRTRIHEAENWFLRAKKLA---PGDASVYKHFGVFLLEQERYPEAASQLVE 725

Query: 351 AMKIAP 356
           A+ + P
Sbjct: 726 AVALEP 731


>gi|320108094|ref|YP_004183684.1| hypothetical protein AciPR4_2930 [Terriglobus saanensis SP1PR4]
 gi|319926615|gb|ADV83690.1| hypothetical protein AciPR4_2930 [Terriglobus saanensis SP1PR4]
          Length = 2033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 64/180 (35%), Gaps = 16/180 (8%)

Query: 196 QQYVLAKEW-SRAITFLNQKKKNAKEWNRNRAILLIARSLE-------NADKGDMIASYH 247
              V  + W +       +  +  ++      +  +A++           + G+++ +  
Sbjct: 182 DLEVARESWRAGNRREAQEAVERYRQPQAWDLLAGLAKASVCRTEAQIALEDGEVVQARR 241

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
              E+     +        A  L ++N++++A+++L+    V      A +   L   + 
Sbjct: 242 LLDEARSHNPDLTP--RLEALVLRAENRRKEAQLLLQASLDVENISLYAALSLELGEVDE 299

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
                   +L  +  E+ ++  + +   L  G    A  +   A++I+P   +    A I
Sbjct: 300 T-----LAKLVGLA-ETSDTHRLRALAYLLKGERGSASDEIEKAIEISPSWTVNRHAAAI 353


>gi|154252475|ref|YP_001413299.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
 gi|154156425|gb|ABS63642.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
          Length = 205

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 8/156 (5%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATREFAVYSLY 161
           A +M +    +    +     L   +    E +    A +   +    P+        L 
Sbjct: 36  AAEMAAGEETREAVLDSLFERLRTAK-DETEGRAVESAIQSFWLQSGSPSIDLLMQRGL- 93

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++    D + A  Y  + + +SP            + + +++S A+  + Q  +     
Sbjct: 94  -DALHEQDYDRAHFYFDEVVVLSPGFAEGWNKRATIHYIREDYSSALRDIEQTLR----L 148

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                  L    +   + GD   +      +L L  
Sbjct: 149 EPRHFEALAGLGILLEELGDKKGALDAYRRALALNP 184


>gi|186471657|ref|YP_001862975.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184197966|gb|ACC75929.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum
           STM815]
          Length = 847

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/159 (10%), Positives = 46/159 (28%), Gaps = 4/159 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A  +    +++  +      +L       G  + A  +   A+ ++P    +  +
Sbjct: 543 GKMQEAAAEYRTAIRLDPSDAEPHNNLGLLLKDEGRGDEAMEHFRTAIALAPTLGELHNS 602

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   +        AI    Q  +         A            +G +  +  + +E+ 
Sbjct: 603 LGGLWEDRGRSDLAIEEYRQAIRLQP----RNAGAHNNLGNIWRKEGRLDEAAAEYLEAQ 658

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +L  +             +  +   A        +++PH
Sbjct: 659 RLAPDLGEPHTGLGDVWDALGRLEDAISEYHAAIRLDPH 697



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 58/210 (27%), Gaps = 14/210 (6%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A   L  E   +    +A     +A+ +         A+            AI   +  
Sbjct: 291 VAHVGLGREWHSLMQNATALSEFREAILLDSGYSRAHTALADVLEETDRTDEAIAEYHIA 350

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +A         L    ++ +        +  +   + +L           A   +S  
Sbjct: 351 MAHAPMDEVPHVGL---GNILHHRMHKESEALAEYQMASRLAPKEAPPHHGIAHVWVSLG 407

Query: 275 KK-------RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
           +        R+A  +     + + H ++          +    L        ++ +    
Sbjct: 408 ELDHAIAEYRQAISLDVT--QASTHSDLGEALRRQKKFDEA--LAEFRTAMYLDPDMSGP 463

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                 I  + G+ + A A+ + A+++ P 
Sbjct: 464 HTATGAILYDEGNREDARAEYLTALRLDPT 493


>gi|83595013|ref|YP_428765.1| sulfotransferase [Rhodospirillum rubrum ATCC 11170]
 gi|83577927|gb|ABC24478.1| Sulfotransferase [Rhodospirillum rubrum ATCC 11170]
          Length = 542

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A +   A+  L Q  +   +   +R  L    ++  A KGD+  +   A  +++L    
Sbjct: 47  AAGQAEAAVKALGQAVRLDPDNATHRGNL----AMLLARKGDLAGAIDHARAAVRLAPKD 102

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHL---LSENTVGKLKR 313
               +  A+ LI+    R+AE       +  P      IA     L      +      R
Sbjct: 103 GALRLRLARLLIAAGHPREAEAEALDATRRLPREAASWIALAGARLLDQRPNDAEAPSAR 162

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           AL L        E+L + + + L +G + +A A A LA+K  P     L
Sbjct: 163 ALALA---PNDAEALSLRTDLLLSLGRLAEAEATARLALKRQPTSLAAL 208


>gi|83854858|ref|ZP_00948388.1| TPR domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83842701|gb|EAP81868.1| TPR domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 572

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 7/165 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R      A     +        P V  A+         +  AI   ++  +   + N  
Sbjct: 337 RRSNKPEQAIEVLQQLTRSHGTLPSVHSALGDALRAQDNFKAAIKSYDRAIELTPDSNPQ 396

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVIL 283
           R +L  AR +     G+  AS  D   +LK+  +          SL+ Q +   +A  ++
Sbjct: 397 RWVLYYARGIAEERSGNGEASERDFRAALKINPDQPQVLNYLGYSLVEQGRNLDEALNMI 456

Query: 284 EKIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINK 322
           E+    +P            +Y     E  V +++RA+ L  ++ 
Sbjct: 457 ERAVAASPESGYIVDSLGWVLYRLGRYEEAVDQMERAVELVAVDP 501


>gi|46136665|ref|XP_390024.1| hypothetical protein FG09848.1 [Gibberella zeae PH-1]
          Length = 521

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 54/180 (30%), Gaps = 16/180 (8%)

Query: 107 HSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES- 164
            S +S Q    +  +  LL   Q  L+  + + A    +  +    T       ++  + 
Sbjct: 19  ASALSPQDIPADLPVAQLLTSAQSHLSRGETDEALVYYDAAIARDPTNYLT---IFKRAT 75

Query: 165 --CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--LNQKKKNAKE 220
               +G  + A     K L + P        + +    A +W  A T   L  K  ++ E
Sbjct: 76  TYLSLGRTSQATDDFNKVLSLKPGFEGAHLQLARLRAKAGDWEVAKTQYGLAGKPPSSAE 135

Query: 221 WNRNRAILLIARSLENADKGDM----IASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                   L A+  E A KG+     ++    AI       +        A         
Sbjct: 136 VVELEEAKLAAKLAEMAGKGEKWDECVSHAGTAITVASRSPHLRE---LRAHCRFELGDV 192


>gi|329961716|ref|ZP_08299747.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
 gi|328531457|gb|EGF58297.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
          Length = 481

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 51/147 (34%), Gaps = 13/147 (8%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A   L  K K   E       L+ + +    D G +  +     ++ K    +   S+
Sbjct: 51  EEAGELLKGKNKKNVE-------LVTSIARVYLDAGKLTEAEAYLEKARKADHKAPEVSV 103

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEI 320
                 +++    KA  + E+    +  P+    Y        S +    +++  +L+ I
Sbjct: 104 LEGDIALARKDVGKACQLYEQAIYFD--PDCKEAYLKYAQAYKSASPAQAIEKLQQLKAI 161

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAK 347
             + +E+  +++++        +A   
Sbjct: 162 APDYLEADKVLAEVYYANNHFGKAAEA 188


>gi|303328280|ref|ZP_07358718.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861610|gb|EFL84546.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 208

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 8/124 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
              GDL     Y  +A +       PW   A V       +  +AI  L +  K   ++ 
Sbjct: 71  LERGDLEGCLHYNEEAANCRAKFPIPWSNIAFVHLQRGEPD--KAIAALRKALKWDPKFI 128

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           + +  L  A  +    KGD  AS     E L        A    A +L    +  +A   
Sbjct: 129 QAKNALATAYYM----KGDFKASVEACRELLAQEPGFAPAWNNLALALFDLKEYDQAVEA 184

Query: 283 LEKI 286
            +K 
Sbjct: 185 ADKA 188


>gi|218779462|ref|YP_002430780.1| hypothetical protein Dalk_1614 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760846|gb|ACL03312.1| hypothetical protein Dalk_1614 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 609

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 7/129 (5%)

Query: 159 SLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +YF +    G  +  ++   +A  + P  P V  ++  Q +  K+W  A+  + +  + 
Sbjct: 439 GMYFLAESLAGRPDKVKQALDQAQRLDPHNPLVLNSIADQAMARKDWETALAAIERAIQA 498

Query: 218 AKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
             E +   +   L A  L     G    +   A+ ++ +  ++               + 
Sbjct: 499 GYECYVFRKKAALCAYRL-----GRSEEAESHALAAMGVKADARDILALMFLIAWDLGRD 553

Query: 277 RKAEVILEK 285
            KA+  LE 
Sbjct: 554 EKADSYLEA 562


>gi|148258242|ref|YP_001242827.1| hypothetical protein BBta_7038 [Bradyrhizobium sp. BTAi1]
 gi|146410415|gb|ABQ38921.1| hypothetical protein BBta_7038 [Bradyrhizobium sp. BTAi1]
          Length = 309

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
                +     E  +      +A++   ++L +  ++ +A  +LE+    NP +  +   
Sbjct: 84  ATPQRAAEVYGERYRANPKDAVAAVAYGQALRNNGQREQAVAVLEQATLANPGNKTVLAA 143

Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSK-IALE-MGSIDQAHAKAMLAMKIA 355
           Y   L++N   KL     L   +  ++ +  ++  +  AL+ MG  D+A      A+KI 
Sbjct: 144 YGRALADNGNFKLA-FDVLSRAHSPDNPDWRLLSVQGTALDQMGRHDEARRYYESALKIV 202

Query: 356 P 356
           P
Sbjct: 203 P 203


>gi|159899989|ref|YP_001546236.1| TPR repeat-containing serine/threonin protein kinase [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893028|gb|ABX06108.1| serine/threonine protein kinase with TPR repeats [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 916

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 28/216 (12%)

Query: 164 SCRIGDLNSAQRYATKA-------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  +G+  +A +   KA       L + P+            +  +++  A  F +    
Sbjct: 659 ALHLGEDETAAQRFEKAYQSFDDALALDPNYGLAFAGKGWTQIYERKYEEAQQFFDLAL- 717

Query: 217 NAKEWNRNRAILLIARSLEN---------ADKGDMIASYHDAIESLKLCDNSIMASI-CA 266
              E N+     L  R+L N           + D  A+  D   ++    + +   +   
Sbjct: 718 ---ERNQRDPNALNGRALTNWWLGRNNSSDPQSDYAAAIRDYEAAIAEAPSWLSVYVDLG 774

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEIN 321
              L       KA    +K  + +P +P     +A+ Y      +    LK   +   + 
Sbjct: 775 YVYLYDTKDTDKAIETFKKALERDPEYPNAIAGLADTYYDTRYYDEA--LKLYEQTINLQ 832

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +   + +  + I       D A  +   A+   P 
Sbjct: 833 PDYATAYLGKANILYNNKDYDAAIDQYSTALDYNPS 868



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 13/155 (8%)

Query: 135 QYNIAHEKLEMMLQIPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            Y  A    E  +    +            LY       D + A     KAL+  P+ P 
Sbjct: 748 DYAAAIRDYEAAIAEAPSWLSVYVDLGYVYLY----DTKDTDKAIETFKKALERDPEYPN 803

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   + +  A+    Q      ++    A   + ++    +  D  A+    
Sbjct: 804 AIAGLADTYYDTRYYDEALKLYEQTINLQPDY----ATAYLGKANILYNNKDYDAAIDQY 859

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +L    +   A I  A    ++    +A  +L+
Sbjct: 860 STALDYNPSLKNAYIGKAYCYQAKGDIDEARQVLQ 894


>gi|121594976|ref|YP_986872.1| ParB family protein [Acidovorax sp. JS42]
 gi|120607056|gb|ABM42796.1| ParB family protein [Acidovorax sp. JS42]
          Length = 690

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 14/183 (7%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            +     D   A++   +   +  +     +A+       ++ + AI  +++  +     
Sbjct: 343 CQGESSEDEAKAEKLEQRRDQVVEELQDAEDALQGYAPEVRDVAGAIVTIDRNGEAVIHR 402

Query: 222 NRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              R A     R+LE   +G   A    A +  +  D++  A+  + +     +  R A 
Sbjct: 403 GLLREAEAKALRTLEKLRRGFGSAEGEAANDEHEDADDAPKAASLSDRLAQRLSAHRTAA 462

Query: 281 VILEKIWKVNPHPEIAN-----IYTHLLSENTVG------KLKRALRLEEINKESVESLV 329
           + +E     +PH  +A        T L  +          +L    RLE +  +  ES  
Sbjct: 463 LQIEVA--RHPHVALAALVHGMAQTVLQPDAYGDGLPLGVRLTAQDRLEGMAPDWPESPA 520

Query: 330 IVS 332
            V+
Sbjct: 521 AVA 523


>gi|311272495|ref|XP_003133469.1| PREDICTED: LOW QUALITY PROTEIN: protein TANC1-like [Sus scrofa]
          Length = 1860

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 131  LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             A ++Y  A  K       E M      R     +L     +  D   A+ +A+KAL++ 
Sbjct: 1310 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1369

Query: 185  PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            P +     A  +    ++++  A+  L +  K        R +L 
Sbjct: 1370 PKSYEAFYARARAKRSSRQFVAALADLREAVKLCPTNQEIRRLLA 1414


>gi|291570823|dbj|BAI93095.1| serine/threonine protein kinase containing TPR domain [Arthrospira
           platensis NIES-39]
          Length = 759

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 72/258 (27%), Gaps = 37/258 (14%)

Query: 43  VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102
             L+ L  FL  + L+    R                   +G + L              
Sbjct: 328 AALAGLLVFLGLFELVVPTFRPAY-------------YVRRGNQLLNDA-------RAED 367

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL 160
           AR M    ++    H        +        +++ A    +  L++             
Sbjct: 368 ARNMFVRATEIQPNHAAGWAG--QANALAELGRHDRALVDYQKALELDPNNPDLLTSKGT 425

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKK 216
                ++G+   A     +A+ I P+          A++        +  A+   +Q K 
Sbjct: 426 LL--YQMGEPQKALDTHEQAIAIDPNYARAWHGKGIALIGLQ----RYDEAVEAFDQAKT 479

Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
              +A    +++AI L  +            +     + L+         +     L   
Sbjct: 480 LRPSAPSVWQSKAIALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL 539

Query: 274 NKKRKAEVILEKIWKVNP 291
            +  +A    EK  ++NP
Sbjct: 540 GRHEQALESYEKALEINP 557



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 46/177 (25%), Gaps = 36/177 (20%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           +++    +   A   +    +          +         Q   AE   ++A  K    
Sbjct: 604 ILAGGRGDFEGAIAAYDRAIELRPSFVPALRDRGFALSQWSQALQAEGNTSMASSK---- 659

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
                                   N+A     +AL+I+P+                 +  
Sbjct: 660 -----------------------ANAALESFDQALNINPNDHQSYVGRAIALSHQGRYDE 696

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           A+   ++ +    E      ++ + R L     G    +     ++LK+      A 
Sbjct: 697 ALNAFDRAQ----EIQPQDPLIWVNRGLVLERMGRNNEAIDAYDQALKIQPGFPPAV 749



 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 78/247 (31%), Gaps = 44/247 (17%)

Query: 126 EVQIALAERQYNIAHEKLEM--------MLQIPATREFAV-YSLYFESCRIGDLNSAQRY 176
           +      + +   A +            + + P   E  V           G    A   
Sbjct: 491 KAIALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL--GRHEQALES 548

Query: 177 ATKALDISPDAPWVTEAVVQ----QYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILL 229
             KAL+I+PD     +A++Q     +        A+T  ++  +   E +    NR  +L
Sbjct: 549 YEKALEINPDH---FQALLQKGNVLFSPLGRTEEAVTISDRAIEVQPESHLAWHNRGSIL 605

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +    D    IA+Y  AIE   L  + + A     +   + ++  +A          
Sbjct: 606 ---AGGRGDFEGAIAAYDRAIE---LRPSFVPA--LRDRG-FALSQWSQALQ-------- 648

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                 A   T + S      L+   +   IN    +S V  +      G  D+A     
Sbjct: 649 ------AEGNTSMASSKANAALESFDQALNINPNDHQSYVGRAIALSHQGRYDEALNAFD 702

Query: 350 LAMKIAP 356
            A +I P
Sbjct: 703 RAQEIQP 709


>gi|283852281|ref|ZP_06369553.1| Tetratricopeptide TPR_4 [Desulfovibrio sp. FW1012B]
 gi|283572363|gb|EFC20351.1| Tetratricopeptide TPR_4 [Desulfovibrio sp. FW1012B]
          Length = 1616

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 56/235 (23%), Gaps = 12/235 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYATKALDISPDAPWVT 191
                A      +L      +  +  L     R    D   A      A    P      
Sbjct: 742 GDAAGAEALYRRLLADNPNSQDYLAGLGRAMNRQNKFDQTVAALSPAYAASADPAL---G 798

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             V +  +   ++   +           +      +   A        G           
Sbjct: 799 GVVCEALMALGDYREVVRQAEIGLARRPDDRELLRVAAEASEFARDLAGSEGYVRRY--- 855

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H-PEI-ANIYTHLLSENTV 308
            L L   S+       + L+ Q K  +A    E +   NP H P +   +  + L+    
Sbjct: 856 -LALDPGSLTLQNMLGRLLLDQEKFPEARERFEALLAKNPRHLPSLRGLLSVYQLTGQAR 914

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                A  L E   +   + +  +  A        A+          P   +  L
Sbjct: 915 EAYAVAKALYEAAPDDASARMKFAIAAAGEQDFRPAYPTLEKLRAFGPGSPVLCL 969



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 31/93 (33%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   G  + A     +AL   P  P +        +  K+++ A+  L    K   + 
Sbjct: 34  QQAAARGQTDQALEMVEQALSQDPAYPPLWNQKASLLIRRKDYAGALDTLAIALKVEPDN 93

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                + L A   ++   G    +    +  LK
Sbjct: 94  VETNILELTALLRQDEQSGGKEPALGRYVSGLK 126


>gi|258405464|ref|YP_003198206.1| hypothetical protein Dret_1340 [Desulfohalobium retbaense DSM 5692]
 gi|257797691|gb|ACV68628.1| tetratricopeptide domain-containing protein [Desulfohalobium
           retbaense DSM 5692]
          Length = 369

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 68/213 (31%), Gaps = 19/213 (8%)

Query: 223 RNRAI--LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           R  A+  L   +   +    D +A+  +   +++   +++   +       SQ +  +A 
Sbjct: 11  RKHAVSKLASPKEGASLSSQDTLAAIAELSGAVRNNPDAVEIYLALGNLFRSQGEIERAI 70

Query: 281 VI---LEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINK---ESVESLVIV 331
            I   L    ++ P      +  +           + +    L +  K   +    L  +
Sbjct: 71  HIRNTLIARPRLAPQLKSRALYELGLDYKRGGFYDRAQ--NALAQARKIVGDDPAILTEM 128

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           +++  E G  +QA     L  K         LLAQ E            W   AL   P 
Sbjct: 129 ARLVAESGHYEQAARYYSLLEKPLQEAHFQTLLAQ-EAWRKGERSASRKWLNKALRVYPA 187

Query: 392 --PLWI--SDDGYLSSVWLPLSPISK-TLCYFE 419
               W+  +   Y    W  L  I +  L Y E
Sbjct: 188 SVEAWLEKAIHAYDHGYWKELGDICRQALDYIE 220



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 35/104 (33%), Gaps = 3/104 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYF 162
           R  ++    +    ++  +     ++      Y  A     ++ + +       +  L  
Sbjct: 106 RAQNALAQARKIVGDDPAILTEMARLVAESGHYEQAARYYSLLEKPLQEAHFQTL--LAQ 163

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           E+ R G+ ++++++  KAL + P +                W  
Sbjct: 164 EAWRKGERSASRKWLNKALRVYPASVEAWLEKAIHAYDHGYWKE 207


>gi|254435178|ref|ZP_05048685.1| Tetratricopeptide repeat family [Nitrosococcus oceani AFC27]
 gi|207088289|gb|EDZ65561.1| Tetratricopeptide repeat family [Nitrosococcus oceani AFC27]
          Length = 328

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 57/209 (27%), Gaps = 32/209 (15%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFA------ 156
           +  +   Q     +  +   L    A   A+ +Y  A E     L I   +         
Sbjct: 74  RSLAIREQLLGPDHPEVATTLNNLAALYEAQGRYAQAEELYHRSLAIRE-QLLGPDHPEV 132

Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQQYV---LAKEWS 205
              + +L       G    A+    ++L I      PD P V   +            ++
Sbjct: 133 ATTLNNLAALYEAQGRYAQAEELYHRSLAIREQLLGPDHPEVATTLNNLAALYKKQGRYA 192

Query: 206 RAITFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           +A    ++            + +       +  +  +     + + +     AI    L 
Sbjct: 193 QAEELYHRSLAIREQLLGPDHPEVATTLNNLAALYEAQGRYAQAEELYHRSLAIREQLLG 252

Query: 257 DNSIMASIC---AAKSLISQNKKRKAEVI 282
            +    +I     A    +     KAE +
Sbjct: 253 PDHPEVAIMLNNLAGLYRATGLGEKAESL 281


>gi|300864617|ref|ZP_07109475.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
 gi|300337366|emb|CBN54623.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
          Length = 561

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 74/205 (36%), Gaps = 18/205 (8%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQK 214
           +Y L       G   +A  +  KA+++ PD    W+  A V + +   +    +  +   
Sbjct: 40  LYGL-------GRYEAAVHHYEKAVEVKPDWCQAWLQLATVLRKLHRYD----VVVVCCD 88

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           +    +    +A +L   +L +        +     ++ ++   +  A     ++L   +
Sbjct: 89  RAIGIKPESYKAWVLRGSALLSL--HQYQEALVSFEQATQIQPQNYEAWHYRGRALEELH 146

Query: 275 KKRKAEVILEKIWKVNPH-PEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           + + A     K  ++ P+ P I      T L  +     +    R+ ++   + E+    
Sbjct: 147 QYQTAAACYRKAIEIKPNLPTIWYRQGCTLLHGDRYAEAVAAFERVVKLQPGNAEAWFYR 206

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356
               ++     ++ +    A+++ P
Sbjct: 207 GLALMKALRYAESVSSYDRAVQLQP 231


>gi|289615168|emb|CBI58078.1| unnamed protein product [Sordaria macrospora]
          Length = 1460

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 55/164 (33%), Gaps = 15/164 (9%)

Query: 134 RQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           +  + A+      L+      PA     +Y     +    D   A+R   KA+++SP   
Sbjct: 557 KDRSGAYAMFLESLKNNLNFAPAYTILGIY----YADYAKDKKRARRCFQKAVELSPSEV 612

Query: 189 WVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI- 243
              E + + +    +W R    A   ++  K      ++ + I     +L  A+      
Sbjct: 613 ESAERLARSFADDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFAALGVAELNKQEF 672

Query: 244 -ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +      +L++  N   + +   ++  S  +   A   +   
Sbjct: 673 HKAIVSFQSALRISPNDYHSWVGLGEAYHSSGRYIAATKAILNA 716


>gi|242061938|ref|XP_002452258.1| hypothetical protein SORBIDRAFT_04g022570 [Sorghum bicolor]
 gi|241932089|gb|EES05234.1| hypothetical protein SORBIDRAFT_04g022570 [Sorghum bicolor]
          Length = 210

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 12/118 (10%)

Query: 124 LLEVQIALA--ERQYNIAHEKLEM-MLQIPATREFAVYSLYFES----CRIGDLNSAQRY 176
           LL+ Q      E +Y+ A  K E  ++  P         L+ +       +GD   A   
Sbjct: 58  LLQSQGDKLAEEGKYHEALAKWEAALILTPDNAI-----LHEQKAQVLLEVGDAWRALTA 112

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
           AT+A ++ P  P     + +  +   E   AI   ++      ++N  +A    A  L
Sbjct: 113 ATRATELDPFWPEAWVTLGRAQLNFGEPDSAILTFDKALAIKPDYNDAKADRETAARL 170


>gi|85859130|ref|YP_461332.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85722221|gb|ABC77164.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 332

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 39/125 (31%), Gaps = 3/125 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              N A +  E M +       A   +      + +   A +   KAL I PD  W    
Sbjct: 125 GLNNEAMKTFEEMKKKDPKNALAYEGIARVHLALKNYEKAGKNLEKALQIKPDF-WQCHG 183

Query: 194 VVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +    Y     ++ AI    +      +       L ++  +   + G  + +Y  A+  
Sbjct: 184 LFAFMYDRQNRYNDAIESYQKAIAVKPDSFLLYNNLGMSYYM-MGEYGKSVEAYTKALRI 242

Query: 253 LKLCD 257
            +   
Sbjct: 243 NEKVP 247


>gi|326692491|ref|ZP_08229496.1| hypothetical protein LargK3_01864 [Leuconostoc argentinum KCTC
           3773]
          Length = 421

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 6/152 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL   Q   A +  +  L+  +     +YSL  E   +G L  A+R   + L   P+   
Sbjct: 12  ALERGQLEPAQKFFDQSLRQDSDEL--IYSLAEELYALGFLEEARRAYQQLLAKYPEEDE 69

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +  A+    +   +   A  +L Q + ++  + R     L+ ++     +G   A+ H  
Sbjct: 70  LRTALADIAIEDGDIDDAQNYLAQIQPDSDSYLR----ALLVKADIYQSEGLNEAAEHSL 125

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +++ KL  +  +     A+   +    +KA  
Sbjct: 126 LQAEKLAPDENIIQFALAEFYFANQAYQKAIS 157


>gi|221633509|ref|YP_002522734.1| putative soluble lytic murein transglycosylase [Thermomicrobium
           roseum DSM 5159]
 gi|221155551|gb|ACM04678.1| probable soluble lytic murein transglycosylase precursor
           [Thermomicrobium roseum DSM 5159]
          Length = 748

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 81/258 (31%), Gaps = 15/258 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
              I  +  +Y  A      +L    TR  A Y       R GDL +     T   D  P
Sbjct: 299 RAAILFSAGRYREAVTAFTALLASDPTRAEAWYQRAIARVRAGDLAAGIEELTAMADRYP 358

Query: 186 DAPWVTEAVVQQYVLAKEWSR--AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                 +A+V   +L + W    A   L ++  +                L    +G   
Sbjct: 359 QDARAPDALVTAAMLLE-WRNEPAAEVLYRRVLSQYPETVAARQARFRLGLLAFARGAHD 417

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +        +  D    A+    K+L +  +   A     + ++ +P+           
Sbjct: 418 EARDLWRADAEAGDPR--AAYWYGKALAASGEPVGARAWWSRAYQRDPN--------SFW 467

Query: 304 SENTVGKLKRALRLEE--INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            +     L     + +  +   S++S   V    L+    + A A+  +    APR+ + 
Sbjct: 468 GQRAADLLSGRTTILQQPVAPLSLDSEADVVLAWLDGRGENLAAAREEIEKTAAPRRALL 527

Query: 362 LLLAQIEQANSHNTDKIL 379
           LL A + +A     D   
Sbjct: 528 LLDAGLREAAGWEVDAAR 545


>gi|218550715|ref|YP_002384506.1| hypothetical protein EFER_3426 [Escherichia fergusonii ATCC 35469]
 gi|218358256|emb|CAQ90903.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 248

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 16/145 (11%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFL 211
            Y+L  E  R+G  + A  +  +AL       +  EAV+     Q     +E++     L
Sbjct: 89  HYALANELARLGRYHEAVPHYQQAL----SGIFAHEAVMMLSLAQAQFAIQEFAACQQTL 144

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
               +   ++      LL AR+L   +K     S  + + S         A I  A+ L 
Sbjct: 145 EDVMRYNPDFQSADGHLLFARALAAQEKYADAESEFEVLVSYYPSPQ---ARIYYAELLA 201

Query: 272 SQNKKRKA----EVILEKIWKVNPH 292
             ++ R+A      +++   +  PH
Sbjct: 202 KMSRLREANEQYVAVVDTAKRSRPH 226


>gi|218184970|gb|EEC67397.1| hypothetical protein OsI_34556 [Oryza sativa Indica Group]
          Length = 1014

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 47/168 (27%), Gaps = 16/168 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESC-----RIGDLNSAQRYATKALDI 183
                    A +  +      P   E        E+        G  +       +A   
Sbjct: 86  YALAGDAQRAAKCYQRAATLNPDDAEAG------EAVCDLLDLEGKESLEIALCKEAAGK 139

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           SP A W    +    V  K+WS AI  L    +         A L  A  L     G   
Sbjct: 140 SPRAFWAFRRLGYLQVHQKKWSEAIQSLQHAIRGYPT----CADLWEALGLAYHRLGMFT 195

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           A+      +++L  + + A I +    +     RK         ++ P
Sbjct: 196 AAVKSYGRAVELDGSKVFALIESGNIQLMLGYFRKGVEQFRSALEMAP 243


>gi|167892751|ref|ZP_02480153.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 7894]
          Length = 416

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 16/171 (9%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A + +     D   +     E+L++  + + A++     L       +A  I      V
Sbjct: 28  LAIARQQLATDDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFV 83

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             +P+     +A    +L  +      K+   +   +      L+ ++ I ++   +D A
Sbjct: 84  QQNPKSRDGRLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDA 143

Query: 345 HAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
                  +K+A +K      + ++ LAQI   + +N      W      A 
Sbjct: 144 TTYLKQYVKVAQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 193



 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 79/243 (32%), Gaps = 45/243 (18%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L   Q+ LA+ + + A ++ + M +  ++    + ++     +   L+ A  Y  + + 
Sbjct: 93  RLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVK 152

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++                             +KK   +  +    L    +    D+ + 
Sbjct: 153 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNNE 179

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----- 297
             +     +  +     + A +  A+ L  Q K  +A  +L  +   +P  + A      
Sbjct: 180 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDP-RDAAVIARTD 238

Query: 298 ---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
              ++T    +    +L +A    E   +  +     +  + ++G       +  L M+ 
Sbjct: 239 ASILFTSKRYKEAADRLAQA---VEDFPDDPDLRYDYAMASEKIGQYTTMEQQLRLLMRA 295

Query: 355 APR 357
            P 
Sbjct: 296 QPD 298


>gi|145596768|ref|YP_001161065.1| TPR repeat-containing protein [Salinispora tropica CNB-440]
 gi|145306105|gb|ABP56687.1| Tetratricopeptide TPR_2 repeat protein [Salinispora tropica
           CNB-440]
          Length = 341

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 7/164 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q       +  A+T L     +A + +   A +L+A S      G    +   A  +L +
Sbjct: 20  QLLAELGRYDEAVTEL--GFAHALDADN--AAVLMALSRVQLAAGRPAEALTAANGALAV 75

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLK 312
             +S+ A +    +L    +  +A    ++I  + P    A          S N    L 
Sbjct: 76  AGDSVPALVARGMALADLTEHGEAARTADRILTLGPDDAYAQRSGAAILAGSRNGQPALN 135

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            A R  E+  +     +++  +A  +   D A      A+++ P
Sbjct: 136 AAWRGVELAPQEPAGHLVLGLVAANLQLYDLAERAYTEALRLDP 179


>gi|77918912|ref|YP_356727.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380]
 gi|77544995|gb|ABA88557.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380]
          Length = 272

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 17/201 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD  +A +Y  +AL  + D   +   + +      +   A+           E    
Sbjct: 20  LESGDWAAAVKYYRQALVANEDVAELYAGLGEALAEGGKLEEAVEAYQAALDRVPE---- 75

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEV 281
               L A    + + G    +        +L  ++  A    A+       + + R+A  
Sbjct: 76  DMESLFALGDLHFELGQDDLALACY---SRLASDASEAGEALARMGIVHAGREEYREALD 132

Query: 282 ILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +LE+  K +P        +A +Y+ L  +    K+ R   L +I+ E  + L+ + ++ L
Sbjct: 133 LLEQARKADPDSSFVLNGLAQVYSALGRQEDAQKVLR-QAL-QIDSEDSQILLALGELEL 190

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
           +MG  D A       +++   
Sbjct: 191 DMGHTDVAERLYRQVLELEAD 211


>gi|56751313|ref|YP_172014.1| hypothetical protein syc1304_c [Synechococcus elongatus PCC 6301]
 gi|56686272|dbj|BAD79494.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 923

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 45/152 (29%), Gaps = 8/152 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +   A    ++  A  +L+ +L           +  L +  C      +      +A+ +
Sbjct: 13  QAIAAYQAGEFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQ--RETGITLLRRAIAL 70

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P  P     +          + A+  L Q           R      R++     GD  
Sbjct: 71  DPTDPTHFNNLGNLLQRQGHLTEALERLTQALAIDPTHVAAR----FNRAITLQKLGDPA 126

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +  D  + L+   ++      +A + ++   
Sbjct: 127 TALQDYQQLLEADPDNPEIRYNSAHAALAIGD 158



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A E+  AI  L++   +  +W    A  L  + L                 ++ L    
Sbjct: 19  QAGEFEAAIAQLDRLLGDVPDW----AAALGLQGLCYYCCDQRETGITLLRRAIALDPTD 74

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS----ENTVGKLKRA 314
                     L  Q    +A   L +   ++P H  +A  +   ++     +    L+  
Sbjct: 75  PTHFNNLGNLLQRQGHLTEALERLTQALAIDPTH--VAARFNRAITLQKLGDPATALQDY 132

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQ 343
            +L E + ++ E     +  AL +G  D 
Sbjct: 133 QQLLEADPDNPEIRYNSAHAALAIGDWDF 161


>gi|238797962|ref|ZP_04641452.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           mollaretii ATCC 43969]
 gi|238718167|gb|EEQ09993.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           mollaretii ATCC 43969]
          Length = 249

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+   N A + LE  ++       A   + F   RIG+ ++A++    A+
Sbjct: 35  TRLQLGLEYLAQGDLNAARQNLEKAVEADPQDYRAQLGMAFYEQRIGENSAAEQRYQHAM 94

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +             ++         A++ D
Sbjct: 95  KLAPGNGTVLNNYGAFLCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYCFLRANQND 154

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 155 QARALLS--RALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194


>gi|116625149|ref|YP_827305.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228311|gb|ABJ87020.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 344

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 3/135 (2%)

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE--IANIYTHLLSENTVGKLK 312
             +S    +     L + N+   A    E   K +P  PE   +  Y +   +      +
Sbjct: 154 DPDSAPVHMLLGDVLDAANQTEPATAEFEAAVKASPAEPEAHFSLGYLYWKQKRFAEACR 213

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
                   + + V+++  +    +  G    A      A+ +     +  L   I  A  
Sbjct: 214 EFQAELAQHPKHVQAMTYLGDAEMHAGDEKAAEEHLRRALSLDSNTRLAHLDLGILLAGK 273

Query: 373 HNTDKILYWTQSALH 387
            ++     +   A+ 
Sbjct: 274 DDSAAAARFLSEAIR 288



 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 12/169 (7%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNS 172
            +   V++L   +  A  Q   A  + E  ++     P       Y  + +         
Sbjct: 155 PDSAPVHMLLGDVLDAANQTEPATAEFEAAVKASPAEPEAHFSLGYLYWKQKR----FAE 210

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A R     L   P        +    + A +   A   L +    + + N   A L +  
Sbjct: 211 ACREFQAELAQHPKHVQAMTYLGDAEMHAGDEKAAEEHLRRAL--SLDSNTRLAHLDLGI 268

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            L  A K D  A+     E++++  +   A     + L SQ ++ +AE 
Sbjct: 269 LL--AGKDDSAAAARFLSEAIRIDPSKPDAHYRLGRLLRSQGRESEAEK 315


>gi|300702618|ref|YP_003744218.1| hypothetical protein RCFBP_10260 [Ralstonia solanacearum CFBP2957]
 gi|299070279|emb|CBJ41571.1| conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 584

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 27/226 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A KAL I PD      ++    +   +W      L Q    A E N   AI     
Sbjct: 335 AKMAARKALQIEPDLGEAYASLAHVRLHDWDWVG----LEQDFLRAIELNPGHAIAYYWY 390

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +      G    +     +S ++   + + +   A  L    +  +A   L +  +++P 
Sbjct: 391 AEYLMAAGRAEEAIARVRQSRQMDPLNSVLNSSVAIILYLARRYDQAREELHQALEIDPS 450

Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               H  +  +Y      ++ + +++ A+ L      S E+L  +++       +  A  
Sbjct: 451 HFLLHFRLGLVYQQQKLFDDAIAEMQTAVTLSGR---STEALTGLAQT-YAAADMRAAMQ 506

Query: 347 KAMLAMK-------IAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           + + A++       + P       +A++   +  + ++   W + A
Sbjct: 507 QIVDALENASEKHYVHPYN-----MARV-FGSLGDQEQTFGWLEKA 546


>gi|87199212|ref|YP_496469.1| hypothetical protein Saro_1190 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134893|gb|ABD25635.1| hypothetical protein Saro_1190 [Novosphingobium aromaticivorans DSM
           12444]
          Length = 435

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 41/149 (27%), Gaps = 5/149 (3%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           M++ A   P A  + +    + +         L    A     +  A      +   P  
Sbjct: 1   MAVPAAERPQAPAVEAG-DARKSVQLTPAQLFLFADAARDAGDFAAAESAYRALAANPDI 59

Query: 153 RE---FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                         +  +G    A     + LD  PDA  V   + +   +      A  
Sbjct: 60  DLRTEARFRLGLMLADGMGRPRDAAIEFRRILDEKPDAARVRLELARMDAMLGRLGAAER 119

Query: 210 FLNQKKKNAK-EWNRNRAILLIARSLENA 237
                +   +   +  RA+   A +L  A
Sbjct: 120 EFRAAQATGQLPPDVERAVRFYASALAAA 148


>gi|169782000|ref|XP_001825463.1| heat shock protein STI1 [Aspergillus oryzae RIB40]
 gi|238498850|ref|XP_002380660.1| heat shock protein (Sti1), putative [Aspergillus flavus NRRL3357]
 gi|83774205|dbj|BAE64330.1| unnamed protein product [Aspergillus oryzae]
 gi|220693934|gb|EED50279.1| heat shock protein (Sti1), putative [Aspergillus flavus NRRL3357]
          Length = 579

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 12/151 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A E     L    T +           R  +   A+    K   I P   
Sbjct: 340 AYEKLGDLTQAIEYYNKSLTEHRTPDA------LTKLRNAEKTKAKT--EKEAYIDPAEA 391

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                + Q+     +W  A+    +  K A +  R        R+           +  D
Sbjct: 392 EKARELGQKKFQEADWPGAVDAFTEMTKRAPQDPRG----FSNRAAALIKLMAFPQAVQD 447

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             E++      I A +  A++L++  +  KA
Sbjct: 448 CDEAISRDPKFIRAYMRKAQALMAMKEYNKA 478


>gi|322495154|emb|CBZ30458.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 425

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 51/141 (36%), Gaps = 20/141 (14%)

Query: 166 RIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQ---QYVLAKEWSRAITFLNQK--K 215
             G +    + A  A  I      P +P +   +++    +    ++      L Q    
Sbjct: 258 AAGQVERQLQLAQAAYSIQEKRLGPMSPQLAMTLLEVADAHRANGDFYNQKALLEQAVEL 317

Query: 216 KNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSI--------MASIC 265
           +      ++  ++    +L +A     +        +E+LK+              A++ 
Sbjct: 318 QQRAFGQQHTHLIDTYVALGDACGQLENPKLQAQYYLEALKIARQRFQGRHIAIGKAAVN 377

Query: 266 AAKSLISQNKKRKAEVILEKI 286
           AA++ +S   K KA+ +L++ 
Sbjct: 378 AARAYLSHGNKAKAQALLDEA 398


>gi|300869589|ref|ZP_07114170.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
           sp. PCC 6506]
 gi|300332457|emb|CBN59370.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
           sp. PCC 6506]
          Length = 735

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 21/198 (10%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           DL  A    T+A+ + P       +  +      ++  A+   +  +    +     A  
Sbjct: 490 DLQGAMGDYTEAIRLEPSNVDAYYSRGRARFHLGDYKGALA--DYSQVIRIDSKSVDAY- 546

Query: 229 LIARSLENADKGDMIASYHDAIESLKL-CDNSIM-----ASICAAKSLISQ-NKKRKAEV 281
              R     + G   A+  D  +++ L   +S+       +    K      +   +A  
Sbjct: 547 -ANRCSTQLNLGAHQAAIDDCTQAIALNSQDSVPYNNRCIAYLNLKDYQKAIDDCSQAIK 605

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINKESVESLVIVSKIALEM 338
           +       NP  + A     L       +   +        +N    E+    +KI  ++
Sbjct: 606 V-------NPKNDSAYSNRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSNRAKIHYDL 658

Query: 339 GSIDQAHAKAMLAMKIAP 356
            + + A A  + A+++ P
Sbjct: 659 KNYEDALADYVQAIRLNP 676


>gi|254284172|ref|ZP_04959140.1| type IV pilus biogenesis/stability protein PilW [gamma
           proteobacterium NOR51-B]
 gi|219680375|gb|EED36724.1| type IV pilus biogenesis/stability protein PilW [gamma
           proteobacterium NOR51-B]
          Length = 256

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 72/211 (34%), Gaps = 20/211 (9%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLEN 236
            KAL+             +QY+   +W  A   L   ++ +      + A  L+ +S   
Sbjct: 35  EKALERRVSLA-------RQYIGEGDWENAKRNLELAEEIDGDSAEVHEAFGLVYQSTGE 87

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-----WKVNP 291
            ++ D          +LK+  +   A    A  L S+ +  +AE   E++     +   P
Sbjct: 88  YERADARFQR-----ALKIDPSLSRARNNYAAFLFSRGRFEEAEAQFERVTVDSLYSGRP 142

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +      L   +  G      R   +++ +  +L+ +  +    G I  A     + 
Sbjct: 143 LAFVNLGLARLRLNDDEGAEAAFSRALSMDRTNPIALLEMGFLRFAAGDIASADRYYGVY 202

Query: 352 MKIAPRK--EIFLLLAQIEQANSHNTDKILY 380
             +  R+     LL   I +A   N  +  Y
Sbjct: 203 RTVVARQSPRALLLGIDIAEAKGDNDARSSY 233


>gi|163795705|ref|ZP_02189670.1| TPR repeat [alpha proteobacterium BAL199]
 gi|159179001|gb|EDP63536.1| TPR repeat [alpha proteobacterium BAL199]
          Length = 593

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 60/242 (24%), Gaps = 36/242 (14%)

Query: 67  SCPAMLFHMLHKRNYDKGYKA-----LYTGLMSIAA-----------------HNIPLAR 104
             P  L         D+G  A     +   +    A                      A 
Sbjct: 30  GDP-ALLRHRASARLDRGNFAGATEDVRRAMAKAGANADSALLAVAARLALRTGRAREAE 88

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           ++ +    +    N+ L  LL       +   + A    +  + +   R     +L    
Sbjct: 89  QLATRGLGR-APGNDDLYGLLGA-AQEKQGNTDRAIVSYDAAVNLNPFRRTYRIALAKAL 146

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G+ + A+R   +AL   P        +       +++  A+    +      E    
Sbjct: 147 ETKGNRDRAERVYRQALFTDPTFGDAALNLANLLQSNEQFDEALQLYRRSL----ELLGY 202

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +  +L          G    +      S+ L                +     +AE +L 
Sbjct: 203 KPYVLSNFGALLRKMGRYDQARTAYRRSMCLAPE-------DGGVYYNYGNLYRAEELLA 255

Query: 285 KI 286
             
Sbjct: 256 PA 257


>gi|27372168|dbj|BAC53587.1| crn [Homo sapiens]
          Length = 687

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231
            + +  +P         ++      E         +        +  + W R   + +  
Sbjct: 320 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 379

Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
              E  +  D   +      SL+L            I  A+  I Q     A   L    
Sbjct: 380 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 439

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              P  ++  +Y  L     E    + K   +  E   E+  S +  +++   +G ID+A
Sbjct: 440 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCPSWIKFAELEPILGDIDRA 498

Query: 345 HAKAMLAM 352
            A   LA+
Sbjct: 499 RAIYELAI 506


>gi|330721744|gb|EGG99736.1| Exported zinc metalloprotease YfgC precursor [gamma proteobacterium
           IMCC2047]
          Length = 264

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 173 AQRYATKALDIS-PDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           A +    AL+ + P         +   Y  A + +RA   L    +   +   NR   ++
Sbjct: 71  AIQTFQTALEKANPATETAARYGLALAYAKAGQDNRAKQTL----QPLLDAEPNRISYIV 126

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A +  +    +  +      + L L  ++   S+  A +L  Q K R A+ +LEK     
Sbjct: 127 AYAQIHTSASEQKSVEQILRKHLALNPDNYPLSMALANTLTLQQKYRPAQELLEK--LSQ 184

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            HPE  NI+             R      +N++ V + +  ++ AL  G++DQA  +   
Sbjct: 185 QHPEKPNIWL------------RLAETYGLNRDPVGTHLASAEYALLTGNMDQALKQLDY 232

Query: 351 AM 352
           A+
Sbjct: 233 AL 234


>gi|288927540|ref|ZP_06421387.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330374|gb|EFC68958.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 401

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 10/158 (6%)

Query: 105 KMHSYVSQQHTF-----HNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           K+H                E   YLL+    +   +   +     L+   Q   T+ +  
Sbjct: 193 KLHKPELALRYLPLAQKDKERYEYLLQYLADVYQMQNDTDKYMAVLKEGFQDYPTQTYFY 252

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QK 214
             L     +  + +SA+ Y  +A+   P+  W+  A     +   +++  I   +    K
Sbjct: 253 TRLIEHYSKDNNWSSAKAYVDQAMQAMPEHLWLRVAKSTILLNLGDYNSCIALCDSIIAK 312

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            K+  E   N  +    R++E              + +
Sbjct: 313 HKDLPEVYLNAGLAYFNRAVEEEKTARTSRDLKKKVAA 350


>gi|261420507|ref|YP_003254189.1| hypothetical protein GYMC61_3150 [Geobacillus sp. Y412MC61]
 gi|319768176|ref|YP_004133677.1| hypothetical protein GYMC52_3178 [Geobacillus sp. Y412MC52]
 gi|261376964|gb|ACX79707.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61]
 gi|317113042|gb|ADU95534.1| Tetratricopeptide repeat protein [Geobacillus sp. Y412MC52]
          Length = 490

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 107/328 (32%), Gaps = 47/328 (14%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE-KLEMMLQ 148
            G+ +    ++  ARK      +      +    L    +     +Y  +++   +++  
Sbjct: 27  KGMKAYDRGDLEKARKYFERAVRLD--ERDASFALQLALVLSELGEYQFSNQWLFKIIHD 84

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAK-EWS 205
           +  T    +Y L      +G    A++YA + L   P   +  +A  +++   L   EW+
Sbjct: 85  LDETMYDCLYFLANNFACLGLFREARQYAERYLAHEPAGEFADDAADLLELLRLDGSEWT 144

Query: 206 RAITFL----NQKKKNAKEWNRNRAILLIAR---------------SLENADKGDMIASY 246
                L    ++ ++  +E     AI  +                 +L     GD+  + 
Sbjct: 145 EEEEQLMVLEDRARRLLEEERFAEAIEALEALVARYPDVWSAHNNLALAYFYSGDVDKAK 204

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HP-EIANIYTH 301
               E LK    ++ A   A        ++ +A  + E +  ++P    H  ++   +  
Sbjct: 205 QKVREVLKRDPGNLHALCNALVFAYYLREEEQAAALCETLAGLHPFFREHQYKLGATFAL 264

Query: 302 LLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE- 359
           +   +   + L R  + +  + +       ++  A   G    A     +   + P K  
Sbjct: 265 VGRFDLAFRWLHRLYK-QGFDGDGPF-YYWLACAAYYTGHESLARQMWEVLATLHPEKRG 322

Query: 360 -------------IFLLLAQIEQANSHN 374
                        +  L+A +E     +
Sbjct: 323 EEPWAVSAPVDEALIRLMAWLEGDELAD 350


>gi|254419562|ref|ZP_05033286.1| glycosyl transferase, group 1 family protein [Brevundimonas sp.
           BAL3]
 gi|196185739|gb|EDX80715.1| glycosyl transferase, group 1 family protein [Brevundimonas sp.
           BAL3]
          Length = 558

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++ R G    A     +AL+++P+                E   A+    +        N
Sbjct: 27  QAKRAGAWREAADLYRQALELTPERAGTWVQYGHALREGGEPGAAVQAYVEAIARRP--N 84

Query: 223 RNRAILLIARSLENA-DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                L + R+L      GD   +   A+E   +      A++ A ++L  Q
Sbjct: 85  IGETHLYLGRALLLTGALGDAELALKAALE---IDPALGPAAVDAVRALRRQ 133


>gi|189465185|ref|ZP_03013970.1| hypothetical protein BACINT_01530 [Bacteroides intestinalis DSM
           17393]
 gi|189437459|gb|EDV06444.1| hypothetical protein BACINT_01530 [Bacteroides intestinalis DSM
           17393]
          Length = 563

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A      + A    +    I    E  + +L   +   GD  +A+ Y +KA      A  
Sbjct: 397 AYQAGNLDKAESYFKKAASIKDAPEVNM-NLGLIALTKGDKAAAESYLSKAS----GAKE 451

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILLI 230
           + EA+   Y+   ++ RA++             +  AK++N+ +  L  
Sbjct: 452 LNEALGNLYIAQGQYDRAVSAFGDTKTNSAALAQILAKDYNKAKNTLAS 500


>gi|328953459|ref|YP_004370793.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453783|gb|AEB09612.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 477

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 53/195 (27%), Gaps = 34/195 (17%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            A     ++ A E  +  L+  A          +  +  +  D   A     KAL   P 
Sbjct: 237 AASLREDWSKAGEHFDAALKNEAVLPEAALGRGVARQHLK--DNIGAILDCQKALKWEPG 294

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDM--- 242
                  + +    +   + A T  ++ K+ A +       L L+A              
Sbjct: 295 YALAYFWLGRAQEESGLLTEAATAYHRAKELAPDMREPWLHLGLLAYRGGKLATAKEFLQ 354

Query: 243 --------------------------IASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                                       +      +L L  N + A +   K L+   + 
Sbjct: 355 QVPDDFPQALEKWWRLGQIYLTEQRWEEAQEAFGHALSLRPNYLPALVERGKLLVKLGRP 414

Query: 277 RKAEVILEKIWKVNP 291
            +A  +LE+     P
Sbjct: 415 EEAIPLLEQAVAQQP 429


>gi|311895700|dbj|BAJ28108.1| hypothetical protein KSE_22880 [Kitasatospora setae KM-6054]
          Length = 733

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 10/184 (5%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                  A+       + +  +          R+   A+ GD   +  D    L L  + 
Sbjct: 497 RTGRLQEALADFEAAVRLSPPFPE----AYYNRADVRAELGDTKGAADDFGYVLTLDPDF 552

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALR 316
           + A +  A  L   +    A   +E     +P HP++  +   LL    +T         
Sbjct: 553 VDARLNRASLLAELDDPDAARAEVEAGLATDPTHPQLLTLKAQLLAAEGDTDQAAAACTA 612

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAML--AMKIAPRKEIFLLLAQIEQANSHN 374
               +     +  +  ++A   G +  A A      A+   P    F L       + H 
Sbjct: 613 ALTADPGCAPAWALRGELAYGAGDLAAATADLEHAVALDDDPGMR-FNLAVAYHDGDRHP 671

Query: 375 TDKI 378
               
Sbjct: 672 DAVA 675



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 43/172 (25%), Gaps = 23/172 (13%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GD   A       L + PD                +   A   +           +    
Sbjct: 533 GDTKGAADDFGYVLTLDPDFVDARLNRASLLAELDDPDAARAEVEAGLATDPTHPQ---- 588

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           LL  ++   A +GD   +      +L        A     +          A   LE   
Sbjct: 589 LLTLKAQLLAAEGDTDQAAAACTAALTADPGCAPAWALRGELAYGAGDLAAATADLEHAV 648

Query: 288 KVNPHP----EIANIYTHL---------------LSENTVGKLKRALRLEEI 320
            ++  P     +A  Y                   +E+   +L+RA  L  +
Sbjct: 649 ALDDDPGMRFNLAVAYHDGDRHPDAVALLDAVITETEDPAARLQRARSLLHL 700


>gi|302768233|ref|XP_002967536.1| hypothetical protein SELMODRAFT_87961 [Selaginella moellendorffii]
 gi|300164274|gb|EFJ30883.1| hypothetical protein SELMODRAFT_87961 [Selaginella moellendorffii]
          Length = 751

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 13/212 (6%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW---VTEAVVQQYVLAKEWSRAITFLNQKK 215
            L     R G L  A          +    W       ++       +   A++ L    
Sbjct: 54  GLLQNLVRDGALEEALNLFQ-----ATAHRWDVISWSCLIAANSRNGDSRAALSLLRSML 108

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +    N+   I     +  +    +    +  A++   + D ++ +++           
Sbjct: 109 LHGVPPNKITLISAATAAAHSKIPAEGEFVHDLALQGGWIRDLALSSALL--NMYGKYGL 166

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIVSK 333
             + E I E+I + NP    A I  +  S +    L+      L+ +  ++V +L+ ++ 
Sbjct: 167 LNRMEAIFEQIEERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAV-TLLTMAN 225

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
               MGSI  A     L  +    +   L+LA
Sbjct: 226 ACSRMGSIQAARRIHRLIEESGFDRSRALMLA 257


>gi|159483805|ref|XP_001699951.1| hypothetical protein CHLREDRAFT_141756 [Chlamydomonas reinhardtii]
 gi|158281893|gb|EDP07647.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1432

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 11/102 (10%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNA-----------KEWNRNRAILLIARSLENADKGDMIA 244
                 + ++ AI  L Q+                      A+L   RS          +
Sbjct: 764 DFRTAERWYTEAIDLLEQQLPGLGLSEQQAAALFPNLKTEVAVLYSNRSGARLMTSKPHS 823

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +  DA++++ L    + A+  AA           A  ++E  
Sbjct: 824 ALADALKAMALDGKFLRAASRAATCHCRLGNFSAAHRVVETA 865


>gi|170719938|ref|YP_001747626.1| hypothetical protein PputW619_0752 [Pseudomonas putida W619]
 gi|169757941|gb|ACA71257.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 258

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 4/121 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVY 158
           IP +      +S         L  L   Q       +N A   LE   +I P   +    
Sbjct: 136 IPRSSAASGGLSADEQLDGPVLALLTTAQSQQGSGDFNGAASSLERAQRIAPREPQVLFR 195

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKK 216
            L       GD   A++ A +AL  +   P +   +         K+   A   L ++K 
Sbjct: 196 -LAQVRLSQGDAAQAEQLARRALTYANGRPDLQAELWNTIAQAREKQGDSAGAALARQKA 254

Query: 217 N 217
            
Sbjct: 255 R 255


>gi|170728870|ref|YP_001762896.1| response regulator receiver protein [Shewanella woodyi ATCC 51908]
 gi|169814217|gb|ACA88801.1| response regulator receiver protein [Shewanella woodyi ATCC 51908]
          Length = 583

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 8/117 (6%)

Query: 175 RYATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             A +AL+ S P    V  ++ Q      E+ +A T +     +     + +A+++   +
Sbjct: 173 EIANQALNWSWPPLAHVRLSLSQLLAKRGEFKQAYTVIENALSSKPLNGKVKALVITQLA 232

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICA------AKSLISQNKKRKAEVILE 284
              A   ++  S    + +         A   A      A+    +   R+A  +LE
Sbjct: 233 K-MAQLNNLPTSDTLILNAKNQLPELGSAFELAQSYTQMAQLEFLRGNLRRAIQLLE 288


>gi|92114969|ref|YP_574897.1| tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043]
 gi|91798059|gb|ABE60198.1| Tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043]
          Length = 269

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 14/187 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R  +L+ A+R    AL++ P  P   E +   +   KE + A  F  +  +   ++ R 
Sbjct: 79  LRRDNLSRARRALEHALELGPQDPQALEGMALLHQRQKEPALAEEFFERALEADTDYTRA 138

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQNKKRKAEVI 282
           R       +    D+G + A+      + +       A + A   +    Q     A   
Sbjct: 139 R----NNYAALLYDEGKLDAACRQLRIAAQDMTYDNRAQLLANLGRCRFEQGDLEAARRP 194

Query: 283 LEKI--WKVNPHPEIANIYT----HLLSENTVGKLKRALRLEEINKESVE--SLVIVSKI 334
           LE+   +       +  +          E    +L+R   L +   +S+E  S +  ++ 
Sbjct: 195 LEQALAYDSRDTQSLLLLARLDHTQGHDERAWERLQRFFTLADATPDSLELASEIARARG 254

Query: 335 ALEMGSI 341
             E  + 
Sbjct: 255 DQEAAAF 261


>gi|196234492|ref|ZP_03133317.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196221473|gb|EDY16018.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 333

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 1/154 (0%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           E + A  +  Y  A      +L+        + +L     R   L  A+   TKA+ I P
Sbjct: 115 EARQAFEKGDYRKAEGIYREILKTAPDNLSVLSNLGVVLFRQKKLKEAEDCFTKAIAIEP 174

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIA 244
              +    +   Y    ++  AI+ LN+    + K    +  + +      + ++     
Sbjct: 175 VDGFAHCTLGIVYYTQGKYDVAISELNKAIAVDGKNATAHNYLGVTWSQKGHQEQAQREF 234

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
               A++      +  +A + A KS     K R+
Sbjct: 235 ETAIALDPNYADADYNLAVLLATKSSPDMEKARQ 268


>gi|111223302|ref|YP_714096.1| putative serine/threonine-protein kinase [Frankia alni ACN14a]
 gi|111150834|emb|CAJ62538.1| putative serine/threonine-protein kinase [Frankia alni ACN14a]
          Length = 761

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 2/101 (1%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+ +   +   A  + ++         E    L   + A A      A E  +++ + 
Sbjct: 549 RGLLLLTQGDTAGA--VTAFERVYGEVPGELAPKLALARAAEAGGNLPRAQELYDLVSRT 606

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             T   A + L       GD + A +   +    S      
Sbjct: 607 DDTFTSAAFGLARVRLAAGDRDGAAQAYRRVPAASAAHVEA 647


>gi|24113876|ref|NP_708386.1| hypothetical protein SF2596 [Shigella flexneri 2a str. 301]
 gi|24052973|gb|AAN44093.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|332756492|gb|EGJ86843.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 458 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 517

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R  + ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 518 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 572


>gi|33599887|ref|NP_887447.1| hypothetical protein BB0898 [Bordetella bronchiseptica RB50]
 gi|33567484|emb|CAE31397.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 628

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 86/271 (31%), Gaps = 48/271 (17%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R+M +              ++L  +IA  + +Y+ A  +L   +  PA R  A      +
Sbjct: 361 RQMATAPGATDAGAAAADAHVLLSRIAEDQGRYDEAIRELGR-IDDPAMRYSAH---MRQ 416

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +                                          A+  +++      E   
Sbjct: 417 AT-------------------------------LRARQGRIDDALAMVDRADPQDDE--- 442

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            R + ++ ++    D   +  +    + + K   +++      A     Q +  + E +L
Sbjct: 443 ERTLGVLTKAQILRDADQVDRAVAILVAADKAMPDTVEIKYELAMLYERQGRIDQLERLL 502

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRL------EEINKESVESLVIVSKIAL 336
            ++  ++  P+ A+ Y + L      + +R    L       E++ E    L  +  +  
Sbjct: 503 REVIALD--PDHAHAY-NALGYTLADRNQRLPEALDLITQALELSPEDPFILDSMGWVKF 559

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
            MG    A      A  + P  +I   LA++
Sbjct: 560 RMGEPSAAIEYLKRAYALRPEADIAAHLAEV 590



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 8/265 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            ++  ++A     Y  A   L  + +       A   L F+    G+L  A   A     
Sbjct: 94  RIVGAELAAQRGMYGTAAATLVTLARETGDPRLARRGLEFQ-LAGGNLPGALDAARAWSS 152

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P+    +   +       E S     L    +   +  R++   ++      +   D 
Sbjct: 153 LAPNDIEASSTELALAAANGETSG----LATALRKRIDTARDKPAAIVQAMGVLSRLNDR 208

Query: 243 IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIAN--IY 299
             +     ESL      + A+  A A    +     +A          +P  E A   + 
Sbjct: 209 RLALRILDESLSDSARKLPAAHLALADVAQAAGDYPRAANEAYAALAADPKSEAAAQRVL 268

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +    +      +A      N ++ +  ++++    + G  D A A+     + +P   
Sbjct: 269 EYGAKVDATRAQHQARAFINRNPDARKLRLMLAGQIADGGDYDGALAELQAMARRSPEDF 328

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384
             + +       +   D+   + Q 
Sbjct: 329 DLMFMQAQLAYKAGRLDQARGYLQQ 353


>gi|32471191|ref|NP_864184.1| O-linked GlcNAc transferase [Rhodopirellula baltica SH 1]
 gi|32396893|emb|CAD71861.1| probable O-linked GlcNAc transferase [Rhodopirellula baltica SH 1]
          Length = 508

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 4/155 (2%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
              E    LL    A    +   A +    +L     R    + +     RIG+  +A+ 
Sbjct: 348 LPEEEDDLLLSAYQAEDSGELETAIDCYHAVLARDGARSDIHFQIGELLYRIGETIAARE 407

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
               AL++ PD      ++        +   A+           ++      +    +  
Sbjct: 408 RYYAALEVDPDFVEARSSLAGVLAETGQPELAVAAYRGALALHDDYPD----VHYNLARI 463

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             D    + + H     L+L   S  A    A+  
Sbjct: 464 LEDLHRSVEAEHHWRRFLQLSPGSPWADEAHARLE 498


>gi|117926826|ref|YP_867443.1| hypothetical protein Mmc1_3552 [Magnetococcus sp. MC-1]
 gi|117610582|gb|ABK46037.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 510

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 8/167 (4%)

Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYAT 178
           L  L + Q  L   +   A   L   +   P   + A+ SL  +  R  GDL  +++ A 
Sbjct: 10  LKLLQDAQEHLLRGRLPTAWNILDRALRSTPG--DAAILSLMAQIQRQRGDLPLSEKLAR 67

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
            A+   P+      A+          S A     Q                ++ +     
Sbjct: 68  MAIAAHPEDGQGHLALGHTLAKQGRSSEAEKCWQQAAILDPTNPEP----HLSMAQLAEQ 123

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +   I +   A  +L L  + + A++  A+    +N+  +    L K
Sbjct: 124 EKRYIEAESAADRALSLKPDHLQATMIRARCDAMRNQPDQGAKRLLK 170



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L+  + E+  +G +  +++    +L+            A+    +     +E +      
Sbjct: 12  LLQDAQEHLLRGRLPTAWNILDRALRSTPGDAAILSLMAQIQRQRGDLPLSEKLARMA-- 69

Query: 289 VNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           +  HPE     +A  +T      +    K   +   ++  + E  + ++++A +     +
Sbjct: 70  IAAHPEDGQGHLALGHTLAKQGRSSEAEKCWQQAAILDPTNPEPHLSMAQLAEQEKRYIE 129

Query: 344 AHAKAMLAMKIAPR 357
           A + A  A+ + P 
Sbjct: 130 AESAADRALSLKPD 143


>gi|307150156|ref|YP_003885540.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306980384|gb|ADN12265.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 283

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 57/192 (29%), Gaps = 12/192 (6%)

Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            +M+L+     + A+  L     + GD+ +A     +   ++P     T  + Q     +
Sbjct: 60  YQMVLEREPENQTALQGLLEARLKQGDIKAAIEPLERLALLNPQQSEYTFLLAQAKERVE 119

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----- 257
           ++  A                    L+   S +N     +        +++ L       
Sbjct: 120 DFEGASAAYRAILAAYPGQMMALKGLVDLLSAQNRFSDAVGEVQAALSKAISLQSDEAET 179

Query: 258 ----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGK 310
               +     +   +  + Q K  +A  + ++  K +P    P +A  +       T   
Sbjct: 180 PSNVDLTALQLLLGEIYVKQKKYPEALAVYQEASKFDPKDFRPVLAQAFVLKEQGKTTES 239

Query: 311 LKRALRLEEINK 322
                +   +  
Sbjct: 240 QPLFEQAVTLAP 251


>gi|166364170|ref|YP_001656443.1| hypothetical protein MAE_14290 [Microcystis aeruginosa NIES-843]
 gi|166086543|dbj|BAG01251.1| hypothetical protein MAE_14290 [Microcystis aeruginosa NIES-843]
          Length = 239

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 13/180 (7%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           QY    ++ ++I  L +  +        R IL   + L        +A+     E++K+ 
Sbjct: 51  QYRQQGDFIKSIEALKKSVQLNPNHLDGRVILGWTQHLAK----QPLAAQTTLEETIKIA 106

Query: 257 DNSIMASICAAKS-LISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGK 310
            + + A+  A     +      KA V   K   + P  EIA       Y  L   N+   
Sbjct: 107 PDHV-ATYNALGIVYLVGGHLEKAVVTHTKAANLKPDNEIAYYNLSLAYHRLKDFNSA-- 163

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
           +  A +  ++   +   LV ++ + L+ G   +A      A  +  R      LA +++A
Sbjct: 164 ITNAEKAVKLEPNNPHPLVALAMVYLDQGDSKKAQDTYKKARDLDGRYRQKWFLAHLKEA 223



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 4/115 (3%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +AQ    + + I+PD      A+   Y++     +A+    +      +      I    
Sbjct: 94  AAQTTLEETIKIAPDHVATYNALGIVYLVGGHLEKAVVTHTKAANLKPDNE----IAYYN 149

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            SL      D  ++  +A +++KL  N+    +  A   + Q   +KA+   +K 
Sbjct: 150 LSLAYHRLKDFNSAITNAEKAVKLEPNNPHPLVALAMVYLDQGDSKKAQDTYKKA 204


>gi|108757046|ref|YP_629500.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108460926|gb|ABF86111.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 151

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%)

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           +  +L++  ++     +S  S   + K+ LE     +A      A+++ P     ++   
Sbjct: 49  SDARLEQFKKMVVDFPDSPMSHFSLGKLYLERRQYPEAAQALESAVRLDPTYAAAMVALG 108

Query: 367 IEQANSHNTDKILYWTQSALH 387
              A +  +DK       A  
Sbjct: 109 DAWAGAGESDKAREVLGRARE 129


>gi|326503118|dbj|BAJ99184.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 300

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 42/139 (30%), Gaps = 7/139 (5%)

Query: 144 EMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           E +   P  +    Y     +    GD++ A RY   A+ + P+       +   Y    
Sbjct: 121 EALAIDP--QFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKG 178

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             + A     Q        N                +G +  +Y   +E++++  +  +A
Sbjct: 179 RLNEAAQCCKQAL----VLNPRLVDAHSNLGNLMKAQGLVQEAYTCYLEAIRIDPHFAIA 234

Query: 263 SICAAKSLISQNKKRKAEV 281
               A   +      KA  
Sbjct: 235 WSNLAGLFMEVGDLNKAMQ 253


>gi|260901777|ref|ZP_05910172.1| tetratricopeptide repeat domain protein [Vibrio parahaemolyticus
           AQ4037]
 gi|308108866|gb|EFO46406.1| tetratricopeptide repeat domain protein [Vibrio parahaemolyticus
           AQ4037]
          Length = 771

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 31/193 (16%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM--LQIPAT-----------REFAVYS-- 159
              +  L    E   AL              M  LQ               R  A     
Sbjct: 538 LLSDPVLSVRTEAAAALVS--------HYGEMNPLQRERIQKPLDEYMDIQRFNADRGFG 589

Query: 160 ---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L      +G+ N A     +A+DI P        +   Y    + ++A+  L+   K
Sbjct: 590 RTNLANVYRSLGEANKAIELYQQAIDIEPYFENSYVNLADMYRRQGDEAKALQILSAGMK 649

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              + +     L  +  L    +G+   +     ++ +   ++           + +   
Sbjct: 650 AKPKSSS----LPYSAGLALLRQGNSKQANQYLKQAAESAKDNAQYWYVYG-LALEKTDV 704

Query: 277 RKAEVILEKIWKV 289
            +A   L K ++V
Sbjct: 705 LEASKALNKAFEV 717


>gi|189208243|ref|XP_001940455.1| heat shock protein STI1 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187976548|gb|EDU43174.1| heat shock protein STI1 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 576

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 42/143 (29%), Gaps = 12/143 (8%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A +  +       T E         +       +  +   +A  I+P+  
Sbjct: 336 AYEKMGDLENAIKYYQKAQTEHRTPEV-------LAKLRAAEKAKIQKDREAY-INPEEA 387

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +W  A+   ++  K A +  R        R+       +  ++  D
Sbjct: 388 EKARELGNAKFKESDWPAAVEAYSEMIKRAPDDPRG----YSNRAACFIKLLEFPSAVQD 443

Query: 249 AIESLKLCDNSIMASICAAKSLI 271
             E++K   + I A +  A++  
Sbjct: 444 CDEAIKRDPSFIRAYLRKAQAYF 466


>gi|78101457|pdb|2AVP|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
          Length = 70

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 25/58 (43%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
               +  Y+ A E  +  L++      A Y+L     + GD + A  Y  KAL++ P 
Sbjct: 12  AYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 69



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           + GD + A  Y  KAL++ P +      +   Y    ++  AI +  +  
Sbjct: 15  KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 64


>gi|85707688|ref|ZP_01038754.1| TPR domain protein [Erythrobacter sp. NAP1]
 gi|85689222|gb|EAQ29225.1| TPR domain protein [Erythrobacter sp. NAP1]
          Length = 573

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 25/89 (28%), Gaps = 3/89 (3%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A     +         +  F NE    LLE   A +  ++  A      +      R   
Sbjct: 262 AGLDHASEAADVAAEARQRFPNEPHFALLEAVHAGSAGEWERAERLFADLALDTPIRSL- 320

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISP 185
                    R GD+  A+    + L   P
Sbjct: 321 --HEARHRIRAGDVERAEALLDRTLAAEP 347


>gi|319791963|ref|YP_004153603.1| hypothetical protein [Variovorax paradoxus EPS]
 gi|315594426|gb|ADU35492.1| Tetratricopeptide repeat [Variovorax paradoxus EPS]
          Length = 833

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 8/141 (5%)

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +  A  L+ + L    +G +  +       L        A     ++L  Q + R A   
Sbjct: 18  KADASALLEQGLALHRQGRLAEALQIYQALLSRFPGDADALHLTGEALYRQGRPRLALNH 77

Query: 283 LEKIWKVNPH----PEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           + +    +PH       A I+ HL         L+RA++         E+ + +S +  +
Sbjct: 78  VNQAIAQSPHHFYFNTRATIFMHLNLLAEAQQDLRRAIKAFA---NYPEAYINLSAVYRQ 134

Query: 338 MGSIDQAHAKAMLAMKIAPRK 358
                QA   A  A ++AP+ 
Sbjct: 135 QKKFRQAREAAADATRLAPQA 155


>gi|299132292|ref|ZP_07025487.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
 gi|298592429|gb|EFI52629.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
          Length = 269

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 8/168 (4%)

Query: 126 EVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDI 183
           +   +  E     A E   E     P   +  +   Y ++ R  G    A     +    
Sbjct: 42  KASASAPETDARRAVEVYGEKYRANPKDLDTGLR--YGQALRANGQREQAVAVLEQTNLT 99

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P    V  A  +      ++  A   L++   +       R + +    L+    G   
Sbjct: 100 HPGNREVLGAYGRALAENGDFKLAFDVLSRA--HTPANPDWRILSIQGAVLDQM--GKPE 155

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +      +LK+  +          S +   +  +AE  L +  K+ P
Sbjct: 156 EARRYYASALKIRPDDPSVLSNLGLSYVLTKELPQAEATLRRAQKLAP 203


>gi|301095812|ref|XP_002897005.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108434|gb|EEY66486.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1355

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 29/188 (15%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +  L R+ +S ++ +    +  LV  L     L E   +        M          + 
Sbjct: 107 DAALQRRPNSAMNSRTMASD--LVESLAA--YLKEGDQH--------MTVDE----LFLK 150

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKK 216
            L  E+ +  D   A   A+  + I  +      A+++         W++AI  L    +
Sbjct: 151 GLLAEAEK--DWKRAILLASACVVIDREFILA--ALLRARCCRRLGLWTQAIKDLAHALQ 206

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
              E  R    L + R+  ++  G+   +  D   +L L      A +  A+     ++ 
Sbjct: 207 LRPEDQR----LYLLRACLHSKMGEAENALADVNRALVLHPQYTEALLLRAEIF---HRS 259

Query: 277 RKAEVILE 284
           R A   L+
Sbjct: 260 RAAGAALQ 267


>gi|260780631|ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyrum esculentum subsp.
           ancestrale]
          Length = 168

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 10/108 (9%)

Query: 117 HNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSA 173
             E   Y  +   A +E  Y  A     E M     P  R + +Y++       GD   A
Sbjct: 32  EKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKA 91

Query: 174 QRYATKALDISPDAPWVTE--AVV-----QQYVLAKEWSRAITFLNQK 214
             Y  +AL+ +P  P      AV+     +Q +   +   A  + +Q 
Sbjct: 92  LEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQA 139


>gi|222081467|ref|YP_002540830.1| hypothetical protein Arad_7812 [Agrobacterium radiobacter K84]
 gi|221726146|gb|ACM29235.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 586

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLI 271
           K+  A+      AI  +AR+   AD G++  +   A  ++ +    +    ++ +A+ L 
Sbjct: 368 KQTIARNPTDAEAIATLARAKLAADPGNVKEALDLANRAVSIAPTSDRANIALMSAQFL- 426

Query: 272 SQNKKRKAEVILEKIWKVNP-HPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESV 325
              +   A  I  K   +NP +PEI     A ++     E+ V     A +  +      
Sbjct: 427 -DGRSAAAIEIGNKALALNPSNPEISAKLGAVMFATGFYESAVSLASDAAKAADGAPRDA 485

Query: 326 ESLVIVSKIALEMGSIDQA 344
              ++++  A   G+   A
Sbjct: 486 M--LVLALDAYRRGNWSDA 502


>gi|218245212|ref|YP_002370583.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|218165690|gb|ACK64427.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 297

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y E  +      A     KAL + P+  W      + Y L+  + +AI   N+  +    
Sbjct: 98  YLEELQE--YEKAIECFEKALTVYPNDYWAYYRKGEAYRLSGNYDQAIALFNKTLE---- 151

Query: 221 WNRNRAILLIARSLENA-DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             R+       R  +   + G + A+  D   +L++  +   A     + L   N+  +A
Sbjct: 152 -LRSGDYWACYRRGDCLRESGQLEAALQDYQTALEIKPHDYWAWYQKGQILQQLNQISEA 210

Query: 280 EVILEKIWKVNP 291
               EK     P
Sbjct: 211 IDCYEKALDAEP 222


>gi|170732097|ref|YP_001764044.1| glycosyl transferase group 1 [Burkholderia cenocepacia MC0-3]
 gi|169815339|gb|ACA89922.1| glycosyl transferase group 1 [Burkholderia cenocepacia MC0-3]
          Length = 1666

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 7/188 (3%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             +   +++ A T L     +       R  +    +     + D++ ++     + +L 
Sbjct: 142 ARLRISDFATAETILQAVSGDGIT----RFDVAAGLAECAYQRHDLMRAFEYWTRAAELD 197

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-ANIYTHLLSENTVGKLKR-A 314
              + AS+     LI     R AE I++   +  P   + A     +L            
Sbjct: 198 PEDLNASLQRTNVLIEMGDLRTAEAIIDDAQERWPGSALVAETKARVLKSRADYPAALEF 257

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSH 373
            ++  +   S    +  + + L +G  D A      A+   PR   +  +LA+ E+A   
Sbjct: 258 SQIAVVMDSSPNLHLTHASVLLALGRADDACQTLRQALARQPRDTSVLAMLAECEEAAGR 317

Query: 374 NTDKILYW 381
            +  +  W
Sbjct: 318 RSIALATW 325


>gi|156743138|ref|YP_001433267.1| TPR repeat-containing CheR-type MCP methyltransferase [Roseiflexus
           castenholzii DSM 13941]
 gi|156234466|gb|ABU59249.1| MCP methyltransferase, CheR-type with Tpr repeats [Roseiflexus
           castenholzii DSM 13941]
          Length = 463

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 4/102 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   GDL +A R     +   P +      ++   +L ++    +       + A   
Sbjct: 340 RQAADRGDLATAMRLCETMVQHQPLSAEAH--LLNGQILEQQ--GRLDEALAAYRRAVYL 395

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           + +  + L+A +      G +  +Y      L+        +
Sbjct: 396 DHSLYLALLAMAGILHRTGHVDEAYRAYRRLLRALATLPPHA 437


>gi|329962343|ref|ZP_08300348.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
 gi|328530204|gb|EGF57085.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
          Length = 564

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 21/162 (12%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A      + A    +  + I    E  + +L   +   GD  +A+ Y +KA      +  
Sbjct: 398 AYQAGNLDKAESYFKKAVSIKDAPEANM-NLGLIALTKGDKAAAETYLSKAS----GSKE 452

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           + EA+   YV   ++ +A++          +   N A L    + +     + +AS    
Sbjct: 453 LNEALGNLYVAQGQYDKAVSSFG-------DTKTNSAALAQILAKDYNKAKNTLASIEK- 504

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                   ++       A      N        L+     +P
Sbjct: 505 -------PDAYT-DYLMAVLGARTNNTSMVTSSLKAAVAKDP 538


>gi|117621459|ref|YP_855940.1| cytochrome c-type biogenesis protein CcmH [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117562866|gb|ABK39814.1| cytochrome c-type biogenesis protein CcmH [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 424

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 8/135 (5%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L  + +   E N  R  LL+ R     D  D   +      +  L     M ++  A++
Sbjct: 149 TLGLRTRLKDEPNDYRGWLLLGRLS--LDGNDPEMAREALERAYGLAPQKAMVAVPYAQA 206

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKR-ALRLEEINKESV 325
           L+      +A+ +L      +P    A     +  L  E+    L+R    L  + K S 
Sbjct: 207 LMMTGDDAQADQLLRVAIAQDPANIEARSVYAFMALQKEDFKTALQRWREMLPLMEKGS- 265

Query: 326 ESLVIVSKIALEMGS 340
            +   + + +++   
Sbjct: 266 -TRYTMVERSIDYAE 279


>gi|320588002|gb|EFX00477.1| and tpr domain containing protein [Grosmannia clavigera kw1407]
          Length = 780

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 71/234 (30%), Gaps = 33/234 (14%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV---- 194
           A   L    + P        +LY +    GD   A+R+  +A+++ PD     + +    
Sbjct: 456 AISLLRFNNKDPEAIILRGRALYAQ----GDNVQAERHFRRAIEMDPDLKEAIKWLRIVQ 511

Query: 195 -VQQ-------YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            + +          A  W  AI                 A LL  R+L N       A+ 
Sbjct: 512 KLDRMKEDGNREYKAGRWQSAIEKYTAALAVDPSNRSINAKLLQNRALCNLKLKLYDAAI 571

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
            D   ++ L      A    A +     +   A       WK                E+
Sbjct: 572 ADCDAAVTLDPQYAKARRTKANAYGQAERWEDAVR----EWK---------ALQEREPED 618

Query: 307 T--VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                +L+RA    E+ K   +    +  +A +    +   A   LA+   P K
Sbjct: 619 RTLAKELRRAE--LELKKSQRKDYYKILGVAKDADEKEIKKAYRKLAVIHHPDK 670


>gi|299771335|ref|YP_003733361.1| hypothetical protein AOLE_15505 [Acinetobacter sp. DR1]
 gi|298701423|gb|ADI91988.1| hypothetical protein AOLE_15505 [Acinetobacter sp. DR1]
          Length = 545

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 95/294 (32%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 20  DQALEQTMVAEFALAYDDIPNALHNYTVLAIKSNSTSIKQRALDV-ALEYNDLQAALNIA 78

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 79  THWVAQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 138

Query: 225 RAILLIAR---------------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           R +LL A                +   A  G + ++  +  ++L+         +  A  
Sbjct: 139 RDVLLTALRSSAEKDNPSILALIANLEAQNGQLESALTNINKALRRRPKVTSFILMKANL 198

Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K    +K N    +A I   +    +   L++   + E N ++ E
Sbjct: 199 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEIRYLIQINQSQLALEKLENVIEANPKAEE 258

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 259 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 312



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 365 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 422

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 423 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 464


>gi|296160591|ref|ZP_06843406.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. Ch1-1]
 gi|295889117|gb|EFG68920.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. Ch1-1]
          Length = 596

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 78/240 (32%), Gaps = 16/240 (6%)

Query: 130 ALAERQYNIAHEKL-EMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           A      + A +   +++ + P       +  L +     G+L  A+    +AL I  ++
Sbjct: 10  AHQSGLPHEAEQAYLQVLAEDPRHADALHLLGLLYA--DRGELAQAETLIRRALGIDENS 67

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            ++   +    +     +     L++  + A  +    A      +   AD      +  
Sbjct: 68  IYLVN-LANMLIDQHRETEGEALLHRAIQLAPGY----AAAHYNIATLFADTERRNEAEA 122

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAE-----VILEKIWKVNPHPEIANIYTHL 302
               +L    + + A I  A  LI   +  +AE      +L    +      +  +    
Sbjct: 123 AFRRALDHDADFVPALINLASLLIGAERFPEAEPYCRRALLLDARRERAQHNLGMVLLKT 182

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
                   +    R+ E+  E  E+   ++   ++    ++A +    A+ + P   +  
Sbjct: 183 GRHQEAQSV--FRRVLELEPEHCEACNGLAVALMKDYRYEEAESFVRRALNLDPEHRVAT 240


>gi|281423115|ref|ZP_06254028.1| exported Tpr repeat-family protein [Prevotella oris F0302]
 gi|281402451|gb|EFB33282.1| exported Tpr repeat-family protein [Prevotella oris F0302]
          Length = 657

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 43/125 (34%), Gaps = 5/125 (4%)

Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           Y+L  E+     D   A+++A K + ++P        + + Y+    W +A     +   
Sbjct: 164 YALMTETYLNANDTLQARQWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQAFGKAIH 223

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                          R++   +   +  +  D  +++++  NS +A        ++    
Sbjct: 224 YTPNVVN----NYTYRAMCRVNLNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTVGDD 279

Query: 277 RKAEV 281
             A  
Sbjct: 280 NNAIK 284


>gi|146338444|ref|YP_001203492.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp.
           ORS278]
 gi|146191250|emb|CAL75255.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
           TPR domain protein [Bradyrhizobium sp. ORS278]
          Length = 742

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 79/256 (30%), Gaps = 43/256 (16%)

Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWV--TEAVVQQYVLAKEWSRAITFLNQK 214
           L+ ++    R GDL  AQ    K L   P+         + +      +   A   L + 
Sbjct: 29  LFAQASAFHRSGDLAKAQAGYRKILKKRPNHFGALYQLGLSEHQSRKSD--EAERLLKRA 86

Query: 215 KK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                 + E    RA++L A   +         +     + L L  +   A +   K L 
Sbjct: 87  LLVEPRSVEARYARAVVLSALQRD-------SEALSCFDDLLALKPDLFDAHLERGKLLS 139

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKES 324
              +   A V  +    +NP      +   +     +  L R         +L   +   
Sbjct: 140 RLRRFADAAVSYDHAMLINPQ----RLDVLINKGEALHYLGRFVDAIACYDQLLAAHPTH 195

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL---------------LAQIEQ 369
           + +L+       ++   D+A A    A+ ++P   I L+               L   ++
Sbjct: 196 LAALINRGCAFKDLRRADEAIADFDRALALSPDDTIALINRGETFLTLKRNADALHDFDR 255

Query: 370 ANSHNTDKILYWTQSA 385
             + +    L W   A
Sbjct: 256 VIALDPQFALGWLGRA 271


>gi|87200004|ref|YP_497261.1| hypothetical protein Saro_1987 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135685|gb|ABD26427.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 1039

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 21/185 (11%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-----RQYNIAHEKL-- 143
            L++ A      A                    LL  Q   A           A      
Sbjct: 417 ALLAEAQGRNADAATAFDRAIAIIDSAFPQSPALLSAQARKAAWLGRSGDEAGALALYAH 476

Query: 144 --EMMLQIPAT-----REFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
             +  L +P            Y  L   + R G  N++  +A   +   P      +AV+
Sbjct: 477 VVDQSLAVPDAGTTLRDLLGPYFGLL--AKRNGAGNASAMFAASQVLQRPGVAQT-QAVL 533

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESL 253
            + +       A          +++  R  A++    +L      +   + +  D + SL
Sbjct: 534 ARQMSEGN-DEAAALFRLSLARSRDIARTEAMVEQLSALTGLTEQQAASLKAAQDNLASL 592

Query: 254 KLCDN 258
           K    
Sbjct: 593 KRDQT 597


>gi|333002338|gb|EGK21902.1| tetratricopeptide repeat family protein [Shigella flexneri K-272]
 gi|333016161|gb|EGK35493.1| tetratricopeptide repeat family protein [Shigella flexneri K-227]
          Length = 843

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 458 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 517

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R  + ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 518 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 572


>gi|257058244|ref|YP_003136132.1| hypothetical protein Cyan8802_0336 [Cyanothece sp. PCC 8802]
 gi|256588410|gb|ACU99296.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 297

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y E  +      A     KAL + P+  W      + Y L+  + +AI   N+  +    
Sbjct: 98  YLEELQE--YEKAIECFEKALTVYPNDYWAYYRKGEAYRLSGNYDQAIALFNKTLE---- 151

Query: 221 WNRNRAILLIARSLENA-DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
             R+       R  +   + G + A+  D   +L++  +   A     + L   N+  +A
Sbjct: 152 -LRSGDYWACYRRGDCLRESGQLEAALQDYQTALEIKPHDYWAWYQKGQILQQLNQISEA 210

Query: 280 EVILEKIWKVNP 291
               EK     P
Sbjct: 211 IDCYEKALDAEP 222


>gi|39996798|ref|NP_952749.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39983686|gb|AAR35076.1| TPR domain protein [Geobacter sulfurreducens PCA]
          Length = 626

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 24/82 (29%), Gaps = 2/82 (2%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +AA N   A  +    +    F+   L  L     + A      A +    ++       
Sbjct: 221 LAAGNHAAALPLLKQFANDERFNPRALYLL--ADASRAAGDLKTASDAYNRIVLNYPGEL 278

Query: 155 FAVYSLYFESCRIGDLNSAQRY 176
            A   L F     GD+  A   
Sbjct: 279 TACKGLLFCLRHRGDVEEALEL 300


>gi|117924021|ref|YP_864638.1| hypothetical protein Mmc1_0711 [Magnetococcus sp. MC-1]
 gi|117607777|gb|ABK43232.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 1113

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           ++A  Y  LL+      +     L  +  +  E   I++ +AL     ++A  + + A+ 
Sbjct: 464 QLAVSYQTLLAGQVEQAVGELEALLRLYPQQGEIQAILANLALAQKKPEEARNRLLQAVA 523

Query: 354 IAPRKEIFL-LLAQ 366
             PR E+ L LLAQ
Sbjct: 524 ANPRHELCLELLAQ 537


>gi|261417967|ref|YP_003251649.1| hypothetical protein GYMC61_0485 [Geobacillus sp. Y412MC61]
 gi|297529635|ref|YP_003670910.1| hypothetical protein GC56T3_1307 [Geobacillus sp. C56-T3]
 gi|319767221|ref|YP_004132722.1| hypothetical protein GYMC52_2177 [Geobacillus sp. Y412MC52]
 gi|261374424|gb|ACX77167.1| TPR repeat-containing protein [Geobacillus sp. Y412MC61]
 gi|297252887|gb|ADI26333.1| TPR repeat-containing protein [Geobacillus sp. C56-T3]
 gi|317112087|gb|ADU94579.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 418

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 7/182 (3%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESC 165
                      +E +V     ++  +  +Y+ +    E + +         +     E+ 
Sbjct: 121 RKLRQAYEKAPDEPIVQFALAELYFSHGEYSKSVPLYEQVRKTNKEMAGVLITERIAEAL 180

Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G+  +A  Y  +AL+   D+   T        L    +        K    KE + +
Sbjct: 181 SRSGEFEAALPYYEEALNEKMDSR--TLFAYGFTALQ---AGYTQTAIDKLSALKELDPD 235

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L +  +     +G ++ SY  A+E + + + +    + A K  +  NK  +AE  L+
Sbjct: 236 YTPLYLYLAKAYEQEGRLVQSYETALEGVGVDEWNKELRLYAGKLALKLNKPEEAEEHLK 295

Query: 285 KI 286
           K 
Sbjct: 296 KA 297


>gi|193212688|ref|YP_001998641.1| hypothetical protein Cpar_1033 [Chlorobaculum parvum NCIB 8327]
 gi|193086165|gb|ACF11441.1| hypothetical protein Cpar_1033 [Chlorobaculum parvum NCIB 8327]
          Length = 120

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 10/85 (11%)

Query: 6  RYFFVISLVICSFIIVSHYPE-DVSITWGNRLYRTSP-FVILSILYFFLFAWILLFAVSR 63
           Y  V  ++    ++ +      V+I++ +     S   V+L+ L   +   +L+ A   
Sbjct: 4  LYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLA--- 60

Query: 64 FFLSCPAMLFHMLHKRNYDKGYKAL 88
               P+ L       +  K   AL
Sbjct: 61 -----PSALKKTFKASSQRKRINAL 80


>gi|88602286|ref|YP_502464.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88187748|gb|ABD40745.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 614

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 90/295 (30%), Gaps = 59/295 (20%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLY-- 161
           + + +     +E  + L   ++  A  +Y  A +  + +L      P   E    SLY  
Sbjct: 265 ASLEKAVLLSDEPDILLQYGRVLGACNRYEDALDVFDSVLMQRPGDPNAAEGYARSLYHL 324

Query: 162 ---------FESCRIGDLNSAQ---RYAT----------KALDISPDAPWVTE------- 192
                     E  R  D +++      A           KA+ I     W+ +       
Sbjct: 325 QRWDDLVSFCEKERGEDPDNSFWITTLARVWGWHLSEVDKAVTILYK--WLDQYNGTQIS 382

Query: 193 -AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +    V ++++  A T L+   +N  E       +L   +   A     I  +  A E
Sbjct: 383 LVLADLLVHSEQFEEARTLLSALLENKPE----DYQILFRYASLLA----QIKEFEKAAE 434

Query: 252 SLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----- 302
             +L  +   A    +  A ++        +A     +       P+ A I+        
Sbjct: 435 QFELLLHQRPADGHLAYLAGQACEQSGDPDRALEFFTRAVTSI--PDSAEIWLSRARVLF 492

Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            L +     +  A     +N +  ++ ++     +     D+A         + P
Sbjct: 493 ELGQFAESAVNAAQA-ASLNPDWSDAFLLKGMSEIHAEEYDKARISLTCVTTLDP 546


>gi|83941381|ref|ZP_00953843.1| TPR domain protein [Sulfitobacter sp. EE-36]
 gi|83847201|gb|EAP85076.1| TPR domain protein [Sulfitobacter sp. EE-36]
          Length = 572

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 7/165 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R      A     +        P V  A+         +  AI   ++  +   + N  
Sbjct: 337 RRSNKPEQAIEVLQQLTRSHGTLPSVHSALGDALRAQDNFKAAIKSYDRAIELTPDSNPQ 396

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVIL 283
           R +L  AR +     G+  AS  D   +LK+  +          SL+ Q +   +A  ++
Sbjct: 397 RWVLYYARGIAEERSGNGEASERDFRAALKINPDQPQVLNYLGYSLVEQGRNLDEALNMI 456

Query: 284 EKIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINK 322
           E+    +P            +Y     E  V +++RA+ L  ++ 
Sbjct: 457 ERAVAASPESGYIVDSLGWVLYRLGRYEEAVDQMERAVELVAVDP 501


>gi|322435702|ref|YP_004217914.1| Pyridoxal-dependent decarboxylase [Acidobacterium sp. MP5ACTX9]
 gi|321163429|gb|ADW69134.1| Pyridoxal-dependent decarboxylase [Acidobacterium sp. MP5ACTX9]
          Length = 982

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 3/129 (2%)

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L + R++  A  G  + +  D +  L+L        +   + L    + + A+V+  + 
Sbjct: 525 ALRVQRAILLAQLGRPLEARSDHLRVLELDPTHHANLLELGRLLAGTGQTKAAQVVYTEA 584

Query: 287 WKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            K  PH  +A++      L +++            +++    E+   +      +G  D 
Sbjct: 585 VKHYPHDAVAHVNLGSTLLTNDDPSKASHHYELALQLSPGLPEAHGGLYYALTRLGDPDA 644

Query: 344 AHAKAMLAM 352
           A      A 
Sbjct: 645 AALHRQKAF 653


>gi|297806265|ref|XP_002871016.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297316853|gb|EFH47275.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 41/203 (20%)

Query: 136 YNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              A E  E +   P      V+    L   S R+G          +AL+I  +      
Sbjct: 262 RVSAEEYKEAIALDPEHTANNVHLYLGLCKVSVRLGRGKDGLNSCNEALNIDAELIEALH 321

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              +  +L ++W  A+  L Q  +N+++   + A+    ++L+ + + D       +  +
Sbjct: 322 QRGEAKLLLEDWEGAVEDLKQAAQNSQDMEIHEALGRAEKALKMSKRKDWYKILGISRTA 381

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---------------IAN 297
                              S  + +KA   L   W    HP+               IA 
Sbjct: 382 -------------------SIAEIKKAYKKLALQW----HPDKNVDNREEAENKFREIAA 418

Query: 298 IYTHLLSENTVGKLKRALRLEEI 320
            Y  L  ++   +  R   LE++
Sbjct: 419 AYEVLGDDDKRARFDRGEDLEDM 441


>gi|226973349|gb|ACO94482.1| LuxR-type transcriptional regulator [Streptomyces sp. MP39-85]
          Length = 951

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 20/221 (9%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAKEWSRAITFLNQKK 215
             S R G L  A R A  A        W          +V+ +        A   L  + 
Sbjct: 631 LLSLRRGRLADAVRQAETAYSRLSGPRWNVSSALALTVLVEAHTAMGNHQAAAKHLAAEP 690

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL-------CDNSIMASICAAK 268
             A    R     L AR   +   G+   +  D  E   L         +     +  A+
Sbjct: 691 PPALFLTRAGLHYLYARGRHHLATGNTYLALSDFQECGTLMRRWNIDSPSLAPWRLGEAE 750

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV--- 325
             +    + +A  ++EK       P+     +  ++ +T+  ++   +   I +++    
Sbjct: 751 VWLRLGDREQAARLIEKQLTN---PDTGLTRSRGMTLHTLALVQATAKQPPILRDAFRLL 807

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           E+     + A  +  + +A+ +     +  P       LA+
Sbjct: 808 EASGARYEAAAVLADLSRAYQQLGD-KRARPTARRAWRLAK 847


>gi|194335812|ref|YP_002017606.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308289|gb|ACF42989.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 577

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 74/212 (34%), Gaps = 11/212 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A E+   +L    +     Y+L      +G  +SA+ Y+ K++ ++P   + T  
Sbjct: 70  GDYREAVERYRKLLHDQPSNAAIHYALSKAWVALGVPDSARLYSEKSVLLNPRNKYYTAF 129

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        ++ RA   L ++       +      L + +LE         S     E L
Sbjct: 130 LAFLSHQMHDYGRA-AELYRQLAVLDPGSTEP---LTSLALEYLAVDQPEKSLAVFQEIL 185

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-----KVNPHPEIANIYTHLLSENTV 308
                +  A +      I     ++A   ++++      K   H  +  +Y         
Sbjct: 186 ARDPKNEDALVQMLFVEIKLTHYQEAIATVKELIGQSDSKEKLHLTLGELYLQTRQYGLA 245

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGS 340
            +      L + N  SV + + + +++++  +
Sbjct: 246 SRT--FRELLKSNPGSVSAWLALFEVSVQSAN 275


>gi|332754081|gb|EGJ84452.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70]
 gi|333000876|gb|EGK20447.1| tetratricopeptide repeat family protein [Shigella flexneri K-218]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 458 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 517

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R  + ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 518 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 572


>gi|194754745|ref|XP_001959655.1| GF12977 [Drosophila ananassae]
 gi|190620953|gb|EDV36477.1| GF12977 [Drosophila ananassae]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 75/236 (31%), Gaps = 23/236 (9%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            +   A E  E  +L      +   Y+L       G    AQ Y  KAL++ P+     +
Sbjct: 649 NRTVQAQEVYEQALLYDSENADI-YYNLGVVFLEQGKSQQAQVYFNKALELFPEHE---Q 704

Query: 193 AVVQ----QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           A++        L  E   A      +       +     +     +   D+     +   
Sbjct: 705 ALLNSAILLQELGGE--EARRVSRSRLYKVLAKDDQNEKVYFNLGMLAMDESSFDEAEQF 762

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYT- 300
              ++ L  +   A    A  L    +   A   L +   +  HP        + +IY  
Sbjct: 763 FKRAIHLKPDFRSALFNLALLLADTKRPLDAVPFLNQ--LIRHHPSHVKGLILLGDIYIN 820

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           H+   +     K    +   +  + + L  +  + +E   + +A A    A ++AP
Sbjct: 821 HMKDLDAAE--KSYRSILHYDPNNTQGLHNLCVVFVERKRLAKAAACLQHAQRLAP 874


>gi|149174719|ref|ZP_01853344.1| Tetratricopeptide TPR_4 [Planctomyces maris DSM 8797]
 gi|148846413|gb|EDL60751.1| Tetratricopeptide TPR_4 [Planctomyces maris DSM 8797]
          Length = 374

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +        L+    + E +    E++  +++IALE G  D+A A  ++ ++  P +  F
Sbjct: 94  IQDRAPYQALENFSHVTERHPRYYEAVEAIAEIALEQGLDDRATAALIILVREFPEERRF 153

Query: 362 L-LLAQIEQANSHNTDKILY 380
              +A++      +   + Y
Sbjct: 154 QKSMAELLLQQGKSNRALRY 173


>gi|138896132|ref|YP_001126585.1| TPR domain-containing protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267645|gb|ABO67840.1| TPR domain protein [Geobacillus thermodenitrificans NG80-2]
          Length = 222

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 3/153 (1%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL  + A     A +  S    +H   ++   Y+    +  A  +   A E     L +
Sbjct: 9   QGLAHMRAGEYEEALRCFSEAVNEH--PDDPAGYINIGTVLAAAGEEEKALECFRQALML 66

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A Y +     R      A+    +AL +  +       +       +    A+ 
Sbjct: 67  DERAAAAYYGIGTVHYRREQFAQAKDMFERALALGLNDADTHFMLGMSLCRLEMPRLALP 126

Query: 210 FLNQKKK-NAKEWNRNRAILLIARSLENADKGD 241
           +L +  + N ++      + L   +L+  D+  
Sbjct: 127 YLQRAAELNEEDAEALFQLGLCLAALDYVDEAK 159


>gi|77163704|ref|YP_342229.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
 gi|76882018|gb|ABA56699.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
          Length = 454

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 57/209 (27%), Gaps = 32/209 (15%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFA------ 156
           +  +   Q     +  +   L    A   A+ +Y  A E     L I   +         
Sbjct: 200 RSLAIREQLLGPDHPEVATTLNNLAALYEAQGRYAQAEELYHRSLAIRE-QLLGPDHPEV 258

Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQQYV---LAKEWS 205
              + +L       G    A+    ++L I      PD P V   +            ++
Sbjct: 259 ATTLNNLAALYEAQGRYAQAEELYHRSLAIREQLLGPDHPEVATTLNNLAALYKKQGRYA 318

Query: 206 RAITFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           +A    ++            + +       +  +  +     + + +     AI    L 
Sbjct: 319 QAEELYHRSLAIREQLLGPDHPEVATTLNNLAALYEAQGRYAQAEELYHRSLAIREQLLG 378

Query: 257 DNSIMASIC---AAKSLISQNKKRKAEVI 282
            +    +I     A    +     KAE +
Sbjct: 379 PDHPEVAIMLNNLAGLYRATGLGEKAESL 407


>gi|88855343|ref|ZP_01130007.1| hypothetical protein A20C1_00931 [marine actinobacterium PHSC20C1]
 gi|88815250|gb|EAR25108.1| hypothetical protein A20C1_00931 [marine actinobacterium PHSC20C1]
          Length = 840

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466
           P S +   L  F W  PT  P+  +S      +E   PA+ L   +   +   LP   + 
Sbjct: 487 PRSVVPPALDPFPWGTPTVRPDTAASSTQALLVEPEEPAE-LAVPIEQEEPVELPGSHEH 545

Query: 467 SSFEDSTIH---PLDPHIRQPD---DPGIKEQ 492
               +  +    P  P + QPD   D G+  +
Sbjct: 546 EGPTERALVEDDPDSPQVSQPDTSSDSGMNSE 577


>gi|330995292|ref|ZP_08319203.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329576009|gb|EGG57529.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 327

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 70/219 (31%), Gaps = 25/219 (11%)

Query: 161 YFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKNA 218
           + E+     D  +A   A     +S        +++ +      +       + +  +  
Sbjct: 50  FREALALRNDSETASYLAE--ALLSDKQAEEGRSILAKLAEELPDHIGVRLAMARADEMM 107

Query: 219 KEWNRN-------------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +++ R               A  L   +       D + +     +++    +   A + 
Sbjct: 108 QDYTRMDEDCQAALQIDSCHAGALYRSAQAKHALHDELNAVALLTQAIVQDGHLTEAYLL 167

Query: 266 AAKSLISQNKKRKAEV----ILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLE 318
            A+ L +     +AE     +LE   +  P PE A        L   +    +    +++
Sbjct: 168 RAEILRAMGSLTEAEADIDHLLESE-EARPAPEEAVMLKAALRLQQGDAPTAITYYNKVK 226

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             N    E+ V +S        +D+A +    A+++ P 
Sbjct: 227 TQNPLMGEAYVGLSTAYAANRQLDRALSTLDEAVELMPD 265


>gi|310765808|gb|ADP10758.1| Cellulose synthase operon C domain protein [Erwinia sp. Ejp617]
          Length = 1355

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 100/313 (31%), Gaps = 56/313 (17%)

Query: 86  KALYTGLMSIA--AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ-----IALAERQYNI 138
           ++L   L+ +   + + PL +       Q     + Y   +   +      AL     + 
Sbjct: 228 RSLRQALLWLGPQSGDAPLYQNFQQRHPQDLAVMDYYRKNVSAAEKGQGFSALNNGDVSA 287

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---------- 188
           A    + +LQ       A+  L + + R GD + A  Y  +A  +  +            
Sbjct: 288 AQSAFDRVLQNNPQDADALAGLGYAAQRSGDYSQAAEYLQRAAKLGGNDSQQRQQQADDA 347

Query: 189 --WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
             +   A  QQ + + + ++A++ L+     A+      A L  A +L    + D     
Sbjct: 348 RFYARLASAQQALKSGDSAQALS-LSAPLTQAEGEKGLAAKLFRADALRLNHQPDQAEQT 406

Query: 247 HDAIESLKLCDNSIMASICAAK-----SLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           + A+ +         A+   A+      L  QN+  +A  +L  +      P        
Sbjct: 407 YRAVLATD-------AANRQAQEGLFYVLHQQNRTAEANTLLASL------PASVRQAVA 453

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                T   L+R                  ++  L  G   +A       ++  P     
Sbjct: 454 TRPVATSDPLRR-----------------EAQQRLAAGDTPRAIGILQQGLQRFPGDGWL 496

Query: 362 LL-LAQIEQANSH 373
            L LA+I Q   +
Sbjct: 497 RLDLARIYQQQGN 509



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 53/294 (18%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHS---YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
           Y  L +   ++ + +   A  + +       +          L          Q + A +
Sbjct: 350 YARLASAQQALKSGDSAQALSLSAPLTQAEGEKGL----AAKLFRADALRLNHQPDQAEQ 405

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-------ATKALDISPDAP------ 188
               +L   A    A   L++   +      A            +A+   P A       
Sbjct: 406 TYRAVLATDAANRQAQEGLFYVLHQQNRTAEANTLLASLPASVRQAVATRPVATSDPLRR 465

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              +      + A +  RAI  L Q  +           L +  +     +G+  A+   
Sbjct: 466 EAQQ-----RLAAGDTPRAIGILQQGLQRFP----GDGWLRLDLARIYQQQGNAAAAADL 516

Query: 249 AIESLKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEK-------------IWKVN 290
                 +      A+       AA          +A+ +L +               +VN
Sbjct: 517 ------MQPAFRPAAGSNEIYAAALFASENGAWSQAQSLLSRIPPRSQNTDMRTLAQRVN 570

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            + ++A    +L  ++          L     ++      ++    + G +  A
Sbjct: 571 FNQQMAAARRYLAQDSPAAAANTLRALAVNPPDNPVDAGNLAAGLAQAGDLSTA 624


>gi|297269332|ref|XP_002799893.1| PREDICTED: tetratricopeptide repeat protein 36 isoform 2 [Macaca
           mulatta]
          Length = 222

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 11/138 (7%)

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
             ++   +  +   +   GDL++A     +A+ + P+         Q   L  + + A+ 
Sbjct: 82  EQSKALELQGVM--AAEAGDLSTALERFGQAICLLPERASAYNNRAQARRLQGDVAGALE 139

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI--------M 261
            L +  + +    R      + R L    +G    +  D   + +L              
Sbjct: 140 DLERAVELSGGRGRAARQSFVQRGLLARLQGRDDDARRDFERAARLGSPFARRQLVLLNP 199

Query: 262 ASICAAKSLIS-QNKKRK 278
            +    + L     + R+
Sbjct: 200 YAALCNRMLADMMGQLRR 217


>gi|283851901|ref|ZP_06369177.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283572625|gb|EFC20609.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 741

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 16/210 (7%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G   + +  A + L+  P++      +    V   + + A+  L +          N 
Sbjct: 137 RAGSYAAMEAKAKEFLERFPESGKGWHLLGLSLVARGDGAAALEPLLRAVATLP----ND 192

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L          +G    + +    +L L  +   A      +L    + ++A     +
Sbjct: 193 VDLWDHLGSAYLHQGQPEQAANAFRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQ 252

Query: 286 IWKVNPHPEIANIYTHLLSEN------TVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +  P+  +A+    ++ ++       +    RAL L      +VE+ V  +    E+G
Sbjct: 253 ALRCQPNHAMAHTNLGIVLQSQGQVQAALECHARALALA---PANVEAHVNYANAQKELG 309

Query: 340 SIDQAHAKAMLAMKIAP---RKEIFLLLAQ 366
            I+ A A    A+ + P        LLL +
Sbjct: 310 HIEAAVAAYGRALALDPERLEARTNLLLLE 339



 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 77/243 (31%), Gaps = 24/243 (9%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
             Q+  A      +L        A + L   + + G       +   AL+  P       
Sbjct: 21  AGQFEDAERVYRAILAAQPHHPEANHDLGVLAVQAGKAALGLPFLKAALEARPGVGAYWL 80

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIA---RSLENADKGDM 242
            +++  + A +   A + L+Q ++             R    L      R+LE+  +   
Sbjct: 81  DLLEALLAAGQCDGARSVLDQGRRQGLAGPPVDDLAARLEKALERQSRLRALEDLFRAGS 140

Query: 243 IASYHD-AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HPE 294
            A+    A E L+    S         SL+++     A   L +     P       H  
Sbjct: 141 YAAMEAKAKEFLERFPESGKGWHLLGLSLVARGDGAAALEPLLRAVATLPNDVDLWDH-- 198

Query: 295 IANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + + Y H    E      +RAL L     +   +   +     E+G   +A A    A++
Sbjct: 199 LGSAYLHQGQPEQAANAFRRALAL---RPDYPSAHNNLGNALRELGQPQEAMASYRQALR 255

Query: 354 IAP 356
             P
Sbjct: 256 CQP 258


>gi|145347818|ref|XP_001418358.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578587|gb|ABO96651.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 375

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 88/289 (30%), Gaps = 20/289 (6%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  GL  +A +    A      +S+     +   V     +       Y  A +  E   
Sbjct: 50  LAEGLRHLAMYRCEEAIHSFQQLSRSQY--DTAYVLCAMAKAHSEMVDYANAAQAFEEAR 107

Query: 148 QIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
                R   +  YS      +     +    A +   +   AP     +   + L KE  
Sbjct: 108 AAAPYRLEGLDVYSTVLWHLKEEVKLA--HLAQEVQSLDRLAPETWCVLGNCFSLQKEHE 165

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A+ F  +  +     +            E     D   S +    +L+L      A   
Sbjct: 166 TALKFFQRAIQ----LDPKCTYAHTLSGHEYFANEDFEKSMNCYRAALRLDARHYNAWYG 221

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL------SENTVGKLKRALRLEE 319
                  Q K   +E        +NP   +   Y  +       ++  +  L +A+ L+ 
Sbjct: 222 LGTVYYRQEKYVMSEYHFTYALNINPKSSVLYCYAGMAKHALNDNDAALSLLSQAIALDG 281

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
            N     +   ++ + +   + D A A+     +IAP    +F L+ +I
Sbjct: 282 KNPL---ARYEMAAVLMSEENYDAALAELNKLQEIAPKEASVFFLMGRI 327


>gi|108758716|ref|YP_633191.1| hypothetical protein MXAN_5036 [Myxococcus xanthus DK 1622]
 gi|108462596|gb|ABF87781.1| conserved domain protein [Myxococcus xanthus DK 1622]
          Length = 441

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 89/320 (27%), Gaps = 16/320 (5%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
           +    +   AL      +++     A    S  +     + E   +LL  Q         
Sbjct: 29  ENQAKRAQAALTEARGHLSSGQANAALAALSRAATAAPDNPEP--HLLMAQAHRMAGNEG 86

Query: 138 IAHEKLE----MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            A   L+    M+     T +  +  +Y +     D  +A      A ++ PDA  +  A
Sbjct: 87  AAILALKQAASMLPGSDPTIQRQLADIYLQQGLTKDALAALITMRDAGNL-PDADVLRLA 145

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +           A   L    +   +     A      +     KGD + + +     L
Sbjct: 146 RI--QAREGMIDAAFKTLENILRENPD----DAEAKSVEAEVLWLKGDELLAANLMDRLL 199

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEK---IWKVNPHPEIANIYTHLLSENTVGK 310
                   A +  A+  +       AE  L          P          L        
Sbjct: 200 NQDPALASARLLRARYFLVSGFPDLAESDLNAVKGADAERPEVVTLRARVLLALGRAADA 259

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
            +    L E   ++ ++L  +++     G    A +    A+++ PR      +      
Sbjct: 260 EEALRGLVEAQPQNADALAWLAETVRVQGRRADAQSLVDQALQLNPRLARAQYVRGRSLE 319

Query: 371 NSHNTDKILYWTQSALHAMP 390
              +        + AL A P
Sbjct: 320 EQGDRRGAEEAYRFALSAEP 339


>gi|148654750|ref|YP_001274955.1| hypothetical protein RoseRS_0583 [Roseiflexus sp. RS-1]
 gi|148566860|gb|ABQ89005.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 1333

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 61/170 (35%), Gaps = 18/170 (10%)

Query: 130  ALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            A  ++Q+  A +  +  L +P     TR  A + L   +    ++  A+++ ++A+++ P
Sbjct: 995  AERQQQWVEAAQWYQQALDMPGAASDTRATACHGLGNVAYAQKNVREARQHYSRAIELQP 1054

Query: 186  ---------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI--ARSL 234
                        W  E          +  RA+   +  +   ++  R    L     R+ 
Sbjct: 1055 ANAIAYRNRGLTWAAENPPDYERALADARRALELDSAYENARRDVERYEQALTAPDTRAR 1114

Query: 235  ENADKGDMIASYHDAIESL---KLCDNSIMASICAAKSLISQNKKRKAEV 281
               ++G++        E+    +   ++  A+   A + I       A+ 
Sbjct: 1115 ACLEQGNVAERQQQWAEAAQWYQKAFDTSGAADTRADACIGLGDVAAAQQ 1164



 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 77/274 (28%), Gaps = 34/274 (12%)

Query: 130  ALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
            A  ++Q+  A +     L      P TR  A   L   +        A ++  +ALD+  
Sbjct: 881  AERQQQWEEAAQWYRQALDMPGAAPDTRARACNGLGAVAVEQQQWAEAAQWYRQALDMPG 940

Query: 186  DAPW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
              P         +       ++W+ A  +  Q           R        +    +  
Sbjct: 941  ATPDTRARACNGLGYVAAEQQQWAEAARWRRQALDMPGAAPDTRERACHGLGVVAERQQQ 1000

Query: 242  MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
             + +     ++L +   +  AS   A +         A+  + +      H   A     
Sbjct: 1001 WVEAAQWYQQALDM-PGA--ASDTRATACHGLGNVAYAQKNVREA---RQHYSRA---IE 1051

Query: 302  LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG-SIDQAHAKAMLAMKIAPRKEI 360
            L   N +    R L     N    E  +  ++ ALE+  + + A                
Sbjct: 1052 LQPANAIAYRNRGLTWAAENPPDYERALADARRALELDSAYENARRDVE----------- 1100

Query: 361  FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
                 + EQA +    +     +    A     W
Sbjct: 1101 -----RYEQALTAPDTRARACLEQGNVAERQQQW 1129


>gi|172058086|ref|YP_001814546.1| TPR repeat-containing protein [Exiguobacterium sibiricum 255-15]
 gi|171990607|gb|ACB61529.1| Tetratricopeptide TPR_2 repeat protein [Exiguobacterium sibiricum
           255-15]
          Length = 218

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 4/154 (2%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              Y +A +     ++          +L      + D + A R+  KAL I P       
Sbjct: 13  SGNYELAAQAFNDAIEEQPNDPTGYVNLGTLLQSMDDADRALRFYDKALTIDPTFASAHY 72

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A    Y  A     A   L     +  +     A L     L     GD +       ++
Sbjct: 73  AKGALYFSADLLVEAEESLRLALLHGLD----DADLHFMLGLTYQKLGDPVRGIPRLKQA 128

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +L    +  +     +L    +  +A  I E++
Sbjct: 129 TELNGVDVEIAFQYGLALAQNEQIEEAAEIFEQV 162


>gi|332296843|ref|YP_004438765.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
 gi|332179946|gb|AEE15634.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 210

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 7/186 (3%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G + + TG+      N   A +       + T ++E L+Y+L          Y  + E  
Sbjct: 24  GDRTVRTGMDYYKNGNYAQAAERFEQALTEKTNYSEPLLYMLLGNSYKMTGNYAASIECQ 83

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           E  L           +L       GD   A+   T A+   P       ++   Y+   +
Sbjct: 84  EKSLAAKK-DYRGFINLGMTYRAAGDDAGAEHAYTDAIAFDPAQAEAYASLGALYIARND 142

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            + A+  L +        N  +A L +AR+L     GD   +     ++  L      A+
Sbjct: 143 EAAALGALEEAVALDPSQNVPQANLALARAL----NGDFAGAEQALAKAESLEYEH--AA 196

Query: 264 ICAAKS 269
              A+ 
Sbjct: 197 EIRARI 202


>gi|330838881|ref|YP_004413461.1| Tetratricopeptide TPR_2 repeat-containing protein [Selenomonas
           sputigena ATCC 35185]
 gi|329746645|gb|AEC00002.1| Tetratricopeptide TPR_2 repeat-containing protein [Selenomonas
           sputigena ATCC 35185]
          Length = 512

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 59/207 (28%), Gaps = 23/207 (11%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
              KR+ D  Y+      ++I     P A      V +    + E     L  Q      
Sbjct: 141 SYQKRDLDAAYREFSRA-IAIN-GENPTAFVNRGIVLRDMKRYEEAQKDFLTAQSF---- 194

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A  + EM L                +    D  +A  +  +A+ + P+        
Sbjct: 195 DSQNALIEFEMGLT---------------ALAQNDSGTAFAHMDRAVALQPNDMGAQMYR 239

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                    +  AI       + A +  + RA +    + E   K D  ++  D   +L 
Sbjct: 240 ASLLYRLGRFDDAIDGYTHVLEKADDALKLRAYIERGLAKEQ--KQDFASAVDDYTAALT 297

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEV 281
           L   +  A       L    K  +A  
Sbjct: 298 LEKENAPALSRRGVCLERLGKHEEAIA 324


>gi|297170612|gb|ADI21638.1| FOG: TPR repeat [uncultured myxobacterium HF0130_06F04]
          Length = 211

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 4/125 (3%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D N A ++  KA+++ P      +     +    +  +AI  L         + R     
Sbjct: 77  DYNQALKHIAKAIELRPKYAQAHQKKAIFHEQNGQLEQAIATLENLLS----FKRKHTAA 132

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           +   +      G    S       L    N     +   + L  Q K  +A    +K   
Sbjct: 133 MAELARLYELNGQAELSEAKYRALLDREPNVYFHWLSFGQFLRRQGKHIEARKAFKKADT 192

Query: 289 VNPHP 293
           + P P
Sbjct: 193 LKPRP 197


>gi|299140627|ref|ZP_07033765.1| TPR domain-containing protein [Prevotella oris C735]
 gi|298577593|gb|EFI49461.1| TPR domain-containing protein [Prevotella oris C735]
          Length = 657

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 43/125 (34%), Gaps = 5/125 (4%)

Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           Y+L  E+     D   A+++A K + ++P        + + Y+    W +A     +   
Sbjct: 164 YALMTETYLNANDTLQARQWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQAFGKAIH 223

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                          R++   +   +  +  D  +++++  NS +A        ++    
Sbjct: 224 YTPNVVN----NYTYRAMCRVNLNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTVGDD 279

Query: 277 RKAEV 281
             A  
Sbjct: 280 NNAIK 284


>gi|297565516|ref|YP_003684488.1| TPR repeat-containing protein [Meiothermus silvanus DSM 9946]
 gi|296849965|gb|ADH62980.1| TPR repeat-containing protein [Meiothermus silvanus DSM 9946]
          Length = 496

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 19/159 (11%)

Query: 128 QIALAERQYNIAHEKLE-MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           Q   A+   N A    E  ++  P        + S+Y E     DL +A+    K   ++
Sbjct: 35  QALYAQGDLNSARATCELALVTDPEYLPSLKLLTSIYLE---RKDLAAAKPTLEKLDRLA 91

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P+ P V        +L    + A+ FL  +        R +A+     +L   ++   + 
Sbjct: 92  PNDPEVQLLTGWARLLEGRPADALVFLGNQGSTQALILRGQAL----EALGRYEEALPLY 147

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               A    +L          AA+      + ++   +L
Sbjct: 148 LRATANAEGRLG---------AARLYQRMGRLQEGITLL 177


>gi|254461942|ref|ZP_05075358.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
 gi|206678531|gb|EDZ43018.1| conserved hypothetical protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 462

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-- 359
           +++ N     + A  L   +   VE+L+I ++ A ++G + +A + A  A   A      
Sbjct: 48  IVNGNPTQGYEMAQALLARDPNDVEALIIRARAARDLGKLTEALSTARKAWFGAQNASER 107

Query: 360 --IFLLLAQIEQANSHNTDKILYWTQSAL-HAMPD 391
               +++AQ    N     +   W + A  +A  +
Sbjct: 108 FGASMVMAQTLSTNGA-KTRAQLWLRRAAQNAPSE 141


>gi|218782133|ref|YP_002433451.1| hypothetical protein Dalk_4303 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763517|gb|ACL05983.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 209

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 49/160 (30%), Gaps = 19/160 (11%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                 L+ E+              +A+  SP       A+    +   +    + +  Q
Sbjct: 38  LLGKR-LFNEAEIE---------LKEAISCSPSLAEAYVALGGIALDRGDLDGCLDWNKQ 87

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             K+   +    A +    +     KGD   +  +  +++    N I A    A    +Q
Sbjct: 88  SIKSRAGFAEGFANIGFCLA----QKGDFDEAVRNLRKAINYNQNFIQAYTTLASVYYTQ 143

Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308
               ++    EK  ++NP     H  +A  Y      +  
Sbjct: 144 GLVEESIAAAEKALELNPNFAPAHNNLALAYLEREEYDRA 183



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                ++  A+    +  + A  +N+N        +     +G +  S   A ++L+L  
Sbjct: 106 LAQKGDFDEAV----RNLRKAINYNQNFIQAYTTLASVYYTQGLVEESIAAAEKALELNP 161

Query: 258 NSIMASICAAKSLISQNKKRKA----EVILEKIWKVNP 291
           N   A    A + + + +  +A    +  LE  ++V+P
Sbjct: 162 NFAPAHNNLALAYLEREEYDRAIEHCDKALELGFEVHP 199


>gi|169613424|ref|XP_001800129.1| hypothetical protein SNOG_09843 [Phaeosphaeria nodorum SN15]
 gi|111061988|gb|EAT83108.1| hypothetical protein SNOG_09843 [Phaeosphaeria nodorum SN15]
          Length = 583

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 45/158 (28%), Gaps = 12/158 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A    +       T E           R      A+    +   ISP+  
Sbjct: 343 AYEKLGDLANAILFYQKAQTEHRTPEV------LAKLR--AAEKAKIIKERESYISPEEA 394

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +W  A+   ++  K A +  R        R+       +  ++  D
Sbjct: 395 EKARELGNAKFKESDWPAAVEAYSEMIKRAPDDPRG----YSNRAACFIKLLEFPSAVQD 450

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             E++K   + I A +  A++  +  +  K   +  + 
Sbjct: 451 CDEAIKRDPDFIRAYLRKAQAYFTMREYSKCADVCAEA 488


>gi|39945968|ref|XP_362521.1| hypothetical protein MGG_08104 [Magnaporthe oryzae 70-15]
 gi|145019348|gb|EDK03576.1| hypothetical protein MGG_08104 [Magnaporthe oryzae 70-15]
          Length = 376

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 24/145 (16%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA---QRYATKALDISP 185
            A     +  A  K +            +  L  E  R  +   A   ++ A     ++ 
Sbjct: 230 SAFKVGDHATALTKYQK----------GLRYLNEEPERDQENIPADVKEKLAALRFTLNN 279

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +A     A++   + +  W  A    +         + +RA  L  R L      D  A+
Sbjct: 280 NA-----ALMNLKLES--WEDAKNAASSALAVKSASDADRAKALYRRGLAYIRLKDEDAA 332

Query: 246 YHDAIESLKLCDNSIMASICAAKSL 270
             D  E+ KL      A    AK L
Sbjct: 333 IKDLEEAKKLA----PADAAVAKEL 353


>gi|39996216|ref|NP_952167.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39982981|gb|AAR34440.1| TPR domain protein [Geobacter sulfurreducens PCA]
          Length = 299

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 5/160 (3%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    KA+ + PD       +   Y+  + W  AI+       +    N+  A + +  
Sbjct: 133 AELKFRKAISLKPDYSDARNNLGVNYLEMQRWDDAISQFKLVMADILFLNQEDARINLGL 192

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     KGD+  +      S+     +++A +   +   + ++   A     K  ++N +
Sbjct: 193 A--YLGKGDLPQALETLRASVSHNPRNLIARVAIGRVYFAMDRAEMAIQEYRKAIEINKN 250

Query: 293 PEIANIY---THLLSENTVGKLKRALRLEEINKESVESLV 329
            + A+ Y    H+  ++ V           I  +S +  +
Sbjct: 251 YQNAHYYLALAHVKQKDYVAAADAFREAIRIAPDSEKGRL 290


>gi|322437095|ref|YP_004219307.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321164822|gb|ADW70527.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 652

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 69/238 (28%), Gaps = 40/238 (16%)

Query: 186 DAPWVT-----EAVVQQYVLAKEWS---------RAITFLNQKKKNAKEWNRNRAI---- 227
              WV      + +  +  L   W           AI   N            RA+    
Sbjct: 400 AHLWVQVLPEVDTLASRQALEGAWMSSVLRKNPGDAIALYNLAALKLSTGAAARAVELYT 459

Query: 228 -----------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                      +L A       +GD   +      +LK+      A+   A   +     
Sbjct: 460 QLDGLTPGSARVLTALGSALQARGDDTGAKVRYEAALKVDGGYTDAAFDLATLDVRLGDA 519

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKE-SVESLV 329
             A+ +L  +   +P     H  +A +Y      E  + +L+    L   + E       
Sbjct: 520 AGAKPLLVGMLARHPEDAEAHHLLALVYAGGEEFEEALVQLRAWEALAAKDPEPHRALAQ 579

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           ++S++     ++ +      LA++ A       ++    +A + +          AL 
Sbjct: 580 VLSQMGRGAEALREQQQVVALALRDANDWNDLGVM----EARAGDKVAARRDFLRALE 633


>gi|299742862|ref|XP_001835379.2| pre-mRNA splicing factor prp1 [Coprinopsis cinerea okayama7#130]
 gi|298405385|gb|EAU86347.2| pre-mRNA splicing factor prp1 [Coprinopsis cinerea okayama7#130]
          Length = 1051

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 8/224 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G + +A+     AL + PD   +    V               L+     A +    
Sbjct: 594 EARGKVGTARAILAYALRVYPDRRRLWRQAVDLEKAHG----TRESLDAILSRAVQHCPQ 649

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +L +  + E  + GD+  +      +      S    + A K      +   A  +L 
Sbjct: 650 AEVLWLMAAKEKWNAGDVDGAREILDRAFVANKESEAIWLAAVKLEAENGELGAARELLV 709

Query: 285 KIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +   V     I   +             L+      +   +S +S +I S+I L   +I 
Sbjct: 710 RARSVADTERIWMKSAVFERRQNQLDTALETINTALQKFPKSPKSYLIQSQIYLLKNNIP 769

Query: 343 QAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSA 385
            A       +K  PR   +++  +++E+ +  +  K     + A
Sbjct: 770 AARGSLSAGLKACPRDARLWIAASRLEEVDGKSI-KARAVLEKA 812


>gi|226939801|ref|YP_002794874.1| tetratricopeptide repeat protein [Laribacter hongkongensis HLHK9]
 gi|226714727|gb|ACO73865.1| hypothetical protein LHK_00872 [Laribacter hongkongensis HLHK9]
          Length = 390

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 68/224 (30%), Gaps = 51/224 (22%)

Query: 98  HNIPLARKMHSY--VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
               LA ++H     S      +  L+ L   +        + A E              
Sbjct: 85  GENDLAIRLHQQLLASADLPEQHRDLIQLELAEDFQRAGLVDRAEEI------------- 131

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
               L   S R G  + A+                   ++  +   ++W+RAI    + +
Sbjct: 132 ----LLPLSQRAGVADRARSR-----------------LLDLFQQERDWARAIQIAGELR 170

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSLIS 272
            +   + R  A      +     K D+ ++      A+ + + C     A +      ++
Sbjct: 171 NDITHYQRELAQFHCELAQTALIKSDLASASQEVAAALAANRRCPR---AYLLQGDVALA 227

Query: 273 QNKKRKAEVILEKIWKV--NPHPE-IANIYTHLLSENTVGKLKR 313
               + A       W+      P+ +A++   L+  +   + +R
Sbjct: 228 SGDTQAA----IAAWQSLEIHQPDYLAHVAERLV--DAYEREQR 265


>gi|88798071|ref|ZP_01113658.1| CheY-like receiver protein [Reinekea sp. MED297]
 gi|88779268|gb|EAR10456.1| CheY-like receiver protein [Reinekea sp. MED297]
          Length = 587

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 20/207 (9%)

Query: 165 CRIGDLNSAQRYATKALDISPDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               D ++A + A + ++  P       +A  +  +  ++++ A  FL           R
Sbjct: 189 LEKEDWSAAAQMAKEVIENHPRHRSIAQKAYAEALIQQQDYTAAENFL-----AGVLDKR 243

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            ++         +  +    A+    IE L    N + A     +SLI Q+K  +A+  L
Sbjct: 244 YQSWAQTQMYRVDLLQKKYQAAETGLIEVLTRDPNMMDAYEYLVESLIEQDKLEEAQSWL 303

Query: 284 EKIWKVNP----------HPEIANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIV 331
           E+    +P          H  +A         +T  +  +  +      N     + +  
Sbjct: 304 ERAVSRSPKNIQRQQKLVH--LAQNNQDYRRASTAARDVMNMSAGTMHENIGHYFAYIRN 361

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358
            +   +    D+   +    +    RK
Sbjct: 362 LRTEADAADADERRREITREITSVTRK 388


>gi|313682869|ref|YP_004060607.1| tpr repeat-containing protein [Sulfuricurvum kujiense DSM 16994]
 gi|313155729|gb|ADR34407.1| TPR repeat-containing protein [Sulfuricurvum kujiense DSM 16994]
          Length = 418

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 91/249 (36%), Gaps = 34/249 (13%)

Query: 97  AHNIPLARKMHSYVSQ----QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           A++I    K  +                ++ LL+      E  +  A +  + ++    +
Sbjct: 75  ANDIKGLSKQVAAALAVSPEDEILKRFEIIVLLK------EGNFGEASQ--KSLVLSEKS 126

Query: 153 REFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           +E A Y LY E+  ++ D   +     KA  ++ D        + QY    E + AI FL
Sbjct: 127 KESANYLLYAEARLKLADYAGSVEALKKAYALNYDETTAERIALIQYTQLGEKNEAIDFL 186

Query: 212 NQKKKNAKEWNRN----RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
             K       N      R   L A   +  D   M    ++A +     D+       A 
Sbjct: 187 --KAHIGTHGNSQILGKRLGSLYADRGDLDDAAQMYEQTYEAFQDPSSADD-------AL 237

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
           K  + Q    K   +LEK    +  P + +IY  + S +    L  A +L E  +++   
Sbjct: 238 KIYLYQQNFSKMTALLEKSHTND--PLLLDIYVKIKSFDKASTL--AQKLYE-REDNP-- 290

Query: 328 LVIVSKIAL 336
            + +++ A+
Sbjct: 291 -LYLAQSAV 298


>gi|257092271|ref|YP_003165912.1| sodium/hydrogen exchanger [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044795|gb|ACV33983.1| sodium/hydrogen exchanger [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 655

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 60/132 (45%), Gaps = 8/132 (6%)

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASICAAKSL-IS 272
           ++   +    ++  +A  L+     +  A+  + +  ++ +     + A +  A  L IS
Sbjct: 418 QHLARFMEQESVAYVALDLDPERVREAAAAGENVMYGDAARRE-TLVAAGVARASVLMIS 476

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               R AE +LE + ++   P++  +    L E  + +L+RA    E+  E++E+ ++++
Sbjct: 477 FADTRAAERVLEHVHRLK--PDLPVV-VRTLDEKDLDRLQRAGA-AEVVPETLEASMVLA 532

Query: 333 KIALEMGSIDQA 344
             AL    +  A
Sbjct: 533 AHALRHAGVPTA 544


>gi|242035953|ref|XP_002465371.1| hypothetical protein SORBIDRAFT_01g037380 [Sorghum bicolor]
 gi|241919225|gb|EER92369.1| hypothetical protein SORBIDRAFT_01g037380 [Sorghum bicolor]
          Length = 615

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 7/194 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A E  +      A    A +       + G++  A+    KAL       ++ + 
Sbjct: 190 GNIRRARELFDAATVADAKHIAAWHGWAILEIKQGNIKKARNLLGKALKYCGGNEYIYQT 249

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +      A+ + +A T   Q  ++  +         +A +      G+   + +   +++
Sbjct: 250 LALLEAKAERFEQARTLFEQATQSNPKS----CASWLAWAQVEMRAGNNTMARNLFEKAV 305

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLK 312
           +    +  +    A    ++     A  +L+    VNP  P I      L    +   + 
Sbjct: 306 QASPKNRFSWHVWALFEANEGNIDSARKLLKIGHAVNPKDPVILQSLALLEYNFSSANVA 365

Query: 313 R--ALRLEEINKES 324
           R    +  +I+   
Sbjct: 366 RVLFRKASQIDPRH 379


>gi|237719154|ref|ZP_04549635.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
 gi|229451533|gb|EEO57324.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
          Length = 320

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/223 (10%), Positives = 72/223 (32%), Gaps = 42/223 (18%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +      + R+G  + A +   +AL I  +       + Q Y+   E ++A   L +  
Sbjct: 35  GLR-----AQRMGRPDYAVKCFIEALAIK-EEFETMGYLSQLYIQMGEMAKARELLEKMA 88

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               +         +  +     + D  A    A +++ + +         A +     K
Sbjct: 89  AMEPDVTS----TFLTLANVCFIQEDYQAMEEAANKAIAIEEG-------NAVAHYLLGK 137

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            RK +                        ++ +  +    +   +  + +E+ ++ ++  
Sbjct: 138 ARKGQ------------------------DDDLMTIAHLTKAITLKDDFIEARLLRAEAL 173

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDK 377
           + +             +   P +E  +LL  ++++A+  + + 
Sbjct: 174 MNLKQYKDMMEDIDAVLAQNPEEETAMLLRGKVKEADGKDEEA 216


>gi|116622331|ref|YP_824487.1| transcriptional regulator domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116225493|gb|ABJ84202.1| transcriptional regulator domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 605

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 77/214 (35%), Gaps = 22/214 (10%)

Query: 164 SCRIGDLNSAQRYATKALDIS---PDAPWVTEAVVQQYVLAKEW-----SRAITFLNQKK 215
           +  I     A+  A + + ++   P      +A ++      ++     S++I    +  
Sbjct: 264 ARAIAAEVQAKLTAQEQIRLARSRPVKADAYDAYLKGRYYYNQFTVDGFSKSIEHFERAI 323

Query: 216 KNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           K    +    A L  A +          +     +   A ++L + D    A    A   
Sbjct: 324 KLDPNYASAYAGLADALASLEQIGAARSEDVHPRALEAANKALAMDDALPEAHAAMASVR 383

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTH------LLSENTVGKLKRALRLEEINKES 324
            +  ++  AE   +K  ++NP   +A++Y           E ++ + +RAL L+ ++  +
Sbjct: 384 ANDWERSAAEREAKKAIELNPGFALAHLYYSNMLRHLGRREESIAEARRALELDPLSPLT 443

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            E    ++   L       A  +    +++ P +
Sbjct: 444 NEE---LADAQLSARQYGAAIEQYQKTLELYPNQ 474


>gi|163849148|ref|YP_001637192.1| transcriptional activator domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|163670437|gb|ABY36803.1| transcriptional activator domain [Chloroflexus aurantiacus J-10-fl]
          Length = 1170

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 55/156 (35%), Gaps = 21/156 (13%)

Query: 207 AITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           A + L +  +     E    RA +L   +    + G    +     ++ +L   S  A +
Sbjct: 552 AESVLQEALRVSEGLEDQVARARVLELLAENKLNMGQPDEAEALQQQARQLRAASPAADL 611

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
            +A+  +   +   A   L + W+                     ++  A       +  
Sbjct: 612 LSARVKLRTGQL-AAARTLLQAWR------------------DRERVATARGATPAPRGH 652

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            E++++++ IA   G +DQA + A   +++   +  
Sbjct: 653 REAVLVLALIAAFEGDVDQALSLAEEGVQVGTERHS 688


>gi|310824106|ref|YP_003956464.1| serine/threonine protein kinase [Stigmatella aurantiaca DW4/3-1]
 gi|309397178|gb|ADO74637.1| serine/threonine protein kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 662

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 59/202 (29%), Gaps = 13/202 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQI 149
           LM + AH   L+            F  +   +LLE + A  L   +   A   +E    +
Sbjct: 424 LMELGAHEAVLSLSETFTQR----FPQDLEAHLLEARAATALLMGKR--AERSIEEASSL 477

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  + +L     R GD+  A     KA +  P    V          +     A  
Sbjct: 478 APKDVRPLLALADLRERQGDVPGALGALAKAYEKRPREARVAPRYGLLLSQSGRLDEAAE 537

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L    +       N A  L   +     +  M  +      +L+      +A       
Sbjct: 538 VLGAWIR-----EHNDARPLAELAFVRYRQARMEDAAALLKRALRKAPRLAVAHYYLGAV 592

Query: 270 LISQNKKRKAEVILEKIWKVNP 291
           L  +     AE    +  +++P
Sbjct: 593 LFQKGDTAGAERAYRQADQLDP 614


>gi|298247036|ref|ZP_06970841.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297549695|gb|EFH83561.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 567

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 59/164 (35%), Gaps = 6/164 (3%)

Query: 118 NEYLVYLLEVQIALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           +     L   + +      +Y  A E  +  LQ  +    A Y+      ++G    A  
Sbjct: 343 DPSSALLYVNRASALCGLKRYQEALEACDQALQRNSRISLAHYNASEALMQLGRHQQALE 402

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +AL   P  P       +  +    + +A+   NQ       ++ + A+L     + 
Sbjct: 403 ACERALQFDPSFPKTYINKSRVLIELGRYQQALDTCNQ----GLVYDAHNALLHNNAGVA 458

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            A+ G    +     ++++L  +S +  +    +LI   + ++A
Sbjct: 459 LANLGRYQQALEACEQAIRLDPSSGLPYVTKGWALIELGRYQEA 502


>gi|195477699|ref|XP_002100281.1| GE16963 [Drosophila yakuba]
 gi|194187805|gb|EDX01389.1| GE16963 [Drosophila yakuba]
          Length = 702

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 26/252 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176
            +    +++++ A    +  L       T+E    +      + GD         S ++Y
Sbjct: 254 ARFEEGQKEHDRARVIYKYALDHLPKDRTQEL-FKAYTIHEKKYGDRAGIEDVIVSKRKY 312

Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230
              + +  +P         ++      +  +      +   N    N     R    L I
Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWI 372

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L+L            +  A+  I     ++A   L  
Sbjct: 373 NYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKDLQRARKALGL 432

Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              + P  ++   Y  L     E    +L    +  E   E+  + +  +++   +G  +
Sbjct: 433 AIGMCPRDKLFRGYIDLEIQLREFERCRL-LYEKFLEFGPENCVTWMKFAELENLLGDTE 491

Query: 343 QAHAKAMLAMKI 354
           +A A   LA++ 
Sbjct: 492 RARAIFELAVQQ 503


>gi|115345661|ref|YP_771842.1| TPR repeat-containing protein [Roseobacter denitrificans OCh 114]
 gi|115292982|gb|ABI93434.1| TPR repeat domain protein, putative [Roseobacter denitrificans OCh
           114]
          Length = 799

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 78/262 (29%), Gaps = 32/262 (12%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE---RQYNIAHEKLEMMLQIPA 151
           +A  +   A  +      +    +      L    A  E        A      +L+   
Sbjct: 553 LATGDTAGALTL-----ARDILADNPDNLSLRAITASVEAANGNLEDAATTYRDILEAEP 607

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-- 209
                   L   + R+   N+A     +AL I PD P +  A         +   AI   
Sbjct: 608 QAANVWLELARVTQRLEGTNAANAVVDEALSIVPDNPNLLWASASYKEQDGDIDGAIEIY 667

Query: 210 --FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI-CA 266
                +   +    N   ++L   R        D  +     + + +  D  + A     
Sbjct: 668 ESLYERNSSSVVVANNLASLLSTYR-------TDEASLERAWVVARRFRDADVPAMQDTF 720

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-------HPEIANIYTHL-LSENTVGKLKRALRLE 318
              L  + +  +A   LE   +  P       H  +   Y  L   E+ + + ++ +++ 
Sbjct: 721 GWILFRRGEVSEALPYLEDAAQGLPNDPLVQYH--LGKAYEALERPEDAMAQFRKVVQIA 778

Query: 319 EINKESVESLVIVSKIALEMGS 340
               +   + VI ++ ++    
Sbjct: 779 G--PDDQRAQVIEARNSVAATE 798


>gi|293606485|ref|ZP_06688843.1| TPR domain protein [Achromobacter piechaudii ATCC 43553]
 gi|292815108|gb|EFF74231.1| TPR domain protein [Achromobacter piechaudii ATCC 43553]
          Length = 289

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 5/137 (3%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
           F N+  V +L  +      Q  ++ +    +L          + L   +   G    A  
Sbjct: 96  FGNDARVAVLRAEALRQTGQTAMSEQAYRALLSTDQ-AADGWHGLGLIAGSRGQFEQAAD 154

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  +SP  P +   +    + A + + A   L Q  + A +  +  A      ++ 
Sbjct: 155 DFARAAKLSPMDPRILGDLGYARLRAGDPAGARVPLGQAAELAPDNGKVLA----NLAVL 210

Query: 236 NADKGDMIASYHDAIES 252
              +G+ + +     ++
Sbjct: 211 LLVEGEPVRAQRLMDQA 227


>gi|291404402|ref|XP_002718421.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 1-like [Oryctolagus cuniculus]
          Length = 564

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 71/229 (31%), Gaps = 33/229 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAK-EWSRAITFL 211
                 C   +   A+    KAL+  P+ P       +T   +        + S A +  
Sbjct: 231 GWALLKCGGKNYERAKACFEKALEADPENPEFNTGYAITVYRLDYPAKRPCDVSDAFSL- 289

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            Q  + A   N   A L    +L+  D G+         E+L    +       AAK   
Sbjct: 290 -QPLRKAIRLNPQDAYLKALLALKLQDVGEEAEGRECLEEALAHTSSQTYVFRYAAKFFR 348

Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANIY---------THLLSENTVGK--LKRAL 315
            Q +  +A   L+   K  P     H +I   Y            +      +  + R +
Sbjct: 349 RQGRVDEALKYLKMALKATPSSAFLHQQIGLCYKKKTNQIMNATHMQPTRQDRENVDRLI 408

Query: 316 RLE--------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +L         +       + V ++++ +  G  ++A       + + P
Sbjct: 409 QLAIFHFEYAVKQKPTFEVAYVDLARMYITAGDHEKAEDTFQKVLCMTP 457


>gi|271965262|ref|YP_003339458.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
 gi|270508437|gb|ACZ86715.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
          Length = 925

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 72/229 (31%), Gaps = 22/229 (9%)

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA------VVQQYVLAKEWSR 206
           R  A+      + R GD+  A+ +A  AL I P + W   A      +V       ++  
Sbjct: 609 RLAAIR--AEIAIRQGDMPGAEHHARTALAIIPLSSWGVAAGGPLSSLVLALTAMGKYDA 666

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-------DNS 259
              +L+Q    A    R     L AR   +        +  D     +L           
Sbjct: 667 VHEYLDQPVPEAMFRTRYGLHYLHARGRYSLATDHPALALRDFQRCGELMSRWELDVPGL 726

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWK----VNPHPEIANIYTHLLSENTVGK---LK 312
           +     AA++ +   +  +A  + E+  +      P      +     + N   +   L+
Sbjct: 727 VAWRADAAEACLRLGRPEQARQLAEEQLRRCGPATPRAHGIAMRLMAATGNARQRTTLLR 786

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +A  L +   +  E    +S +      + +     M+A +        
Sbjct: 787 QATELLQTAGDRYELARALSDLVKVYQELGEYRRAGMIAGRAQAVAREC 835


>gi|241206328|ref|YP_002977424.1| adenylate/guanylate cyclase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860218|gb|ACS57885.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 622

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 19/129 (14%)

Query: 168 GDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKEWSR-----AITFLNQKKK 216
           G+   + +Y T+A  I PD              + + +  + W+R     A   LN   +
Sbjct: 455 GNFAESVQYFTRAAAIRPDDYVSPIHLMSAYRSLGRVLDTENWARLGLLRAERALNLNPE 514

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           N+   +R         +L  A  GD   +   A  ++ +  + I+A    A         
Sbjct: 515 NSGPAHR--------GALALAHMGDATRARDWAARAIAIDPDDIVAQYNLACVYSVLGDV 566

Query: 277 RKAEVILEK 285
            +A  +LEK
Sbjct: 567 DQAIDLLEK 575



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 17/200 (8%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+R   KA+++ PD       +       ++W+     L +  + +         L  A 
Sbjct: 351 ARRMFCKAVELDPDYARAYAGIADCDAAIRDWAPDDVPLRRILEMSARALALDPDLPEAH 410

Query: 233 S---LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +   L     G    +      +L L  N   A+   A+         ++     +   +
Sbjct: 411 ASHGLALHQSGYDDRAAAAFERALALDPNLFEANFHYARFFFMHGNFAESVQYFTRAAAI 470

Query: 290 NP-------HPEIANIYT---HLLSENTVGKLK--RALRLEEINKESVESLVIVSKIALE 337
            P       H  + + Y     +L      +L   RA R   +N E+       +     
Sbjct: 471 RPDDYVSPIH--LMSAYRSLGRVLDTENWARLGLLRAERALNLNPENSGPAHRGALALAH 528

Query: 338 MGSIDQAHAKAMLAMKIAPR 357
           MG   +A   A  A+ I P 
Sbjct: 529 MGDATRARDWAARAIAIDPD 548


>gi|195650415|gb|ACG44675.1| hypothetical protein [Zea mays]
          Length = 558

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 41/188 (21%)

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ-- 113
           I+L A+ R             +KR    G++     L ++A     L R+  +  S    
Sbjct: 360 IVLTALLRA---GETSAAWQTYKRMERAGFEVDGRALDTLARG---LCRRCATDASALGD 413

Query: 114 --------HTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
                       +E +   Y L  Q      + + A   LE M++               
Sbjct: 414 AEEVFGKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRK---------GYALR 464

Query: 164 SCRIGDLNSAQR---YATKALDI----------SPDAPWVTEAVVQQYVLAKEWSRAITF 210
                D+  A      A  AL +           P      EA++ +      W+ A+T 
Sbjct: 465 KRAYTDVVRALCDRGRARDALQVLVLVMIVRDFVPGRN-AFEALLGELSRQGRWADAMTV 523

Query: 211 LNQKKKNA 218
                K  
Sbjct: 524 YAAAVKRG 531


>gi|53850620|ref|NP_001005546.1| tetratricopeptide repeat protein 36 [Rattus norvegicus]
 gi|81910663|sp|Q66H45|TTC36_RAT RecName: Full=Tetratricopeptide repeat protein 36; Short=TPR repeat
           protein 36
 gi|51858911|gb|AAH82024.1| Tetratricopeptide repeat domain 36 [Rattus norvegicus]
 gi|149041497|gb|EDL95338.1| similar to cDNA sequence BC021608 [Rattus norvegicus]
          Length = 186

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 2/114 (1%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            Q+  ++   +      +   GDL++A     KA+ + P+         Q   L  + + 
Sbjct: 43  AQLEQSKALELQG--VRAAEAGDLHTALERFGKAISLLPERASAYNNRAQARRLQGDVAG 100

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A+  L +    +    R      + R L    +G    +  D  ++ +L  +  
Sbjct: 101 ALEDLERAVTLSGGRGRAARQSFVQRGLLARFQGRDDDARRDFEQAARLGSSFA 154


>gi|91784808|ref|YP_560014.1| hypothetical protein Bxe_A0985 [Burkholderia xenovorans LB400]
 gi|91688762|gb|ABE31962.1| Putative membrane protein [Burkholderia xenovorans LB400]
          Length = 391

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+     +L+    A  
Sbjct: 84  GETDRAIRVHQNLLSRADLPVSERDHALYELGQDFLKAGLLDRAEETFR-SLETGDYALG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W ++I      +    E  ++  A      + E   +     +   
Sbjct: 143 AQRALLTIYEIEKDWVKSIDTARHLETMGAESLDKEIAQFHCELAQEALQQKKPDEARRQ 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
              +LK    ++ A+I       +      A     ++ + NP       Y  L++E
Sbjct: 203 LGFALKANPTNVRATILFGDVDAAGGAPEAAIAQWRRVEEQNP------AYLPLVAE 253


>gi|81299019|ref|YP_399227.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
 gi|81167900|gb|ABB56240.1| TPR repeat [Synechococcus elongatus PCC 7942]
          Length = 923

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 45/152 (29%), Gaps = 8/152 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +   A    ++  A  +L+ +L           +  L +  C      +      +A+ +
Sbjct: 13  QAIAAYQAGEFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQK--ETGITLLRRAIAL 70

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P  P     +          + A+  L Q           R      R++     GD  
Sbjct: 71  DPTDPTHFNNLGNLLQRQGHLTEALERLTQALAIDPTHVAAR----FNRAITLQKLGDPA 126

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +  D  + L+   ++      +A + ++   
Sbjct: 127 TALQDYQQLLEADPDNPEIRYNSAHAALAIGD 158



 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A E+  AI  L++   +  +W    A  L  + L                 ++ L    
Sbjct: 19  QAGEFEAAIAQLDRLLGDVPDW----AAALGLQGLCYYCCDQKETGITLLRRAIALDPTD 74

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS----ENTVGKLKRA 314
                     L  Q    +A   L +   ++P H  +A  +   ++     +    L+  
Sbjct: 75  PTHFNNLGNLLQRQGHLTEALERLTQALAIDPTH--VAARFNRAITLQKLGDPATALQDY 132

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQ 343
            +L E + ++ E     +  AL +G  D 
Sbjct: 133 QQLLEADPDNPEIRYNSAHAALAIGDWDF 161


>gi|45200913|ref|NP_986483.1| AGL184Wp [Ashbya gossypii ATCC 10895]
 gi|73917796|sp|Q750X3|CLF1_ASHGO RecName: Full=Pre-mRNA-splicing factor CLF1
 gi|44985683|gb|AAS54307.1| AGL184Wp [Ashbya gossypii ATCC 10895]
          Length = 683

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRA-L 315
               A I  A+  I Q K  KA  IL     + P P++   Y  L        +++R   
Sbjct: 393 TFAKAWIMYAEFEIRQEKLDKARKILGMSLGMCPKPKLFQYYIDLEIKLKEFDRVRRLHE 452

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKEIFLLL 364
           +L E   + + + +  +++   +G  D+A     + +       +     L+
Sbjct: 453 KLLEFQPDVLSNWIEYAELEENLGDEDRARGIYEIGLTADGGLSQARQLQLM 504


>gi|186687238|ref|YP_001870381.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469541|gb|ACC85340.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 254

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 1/106 (0%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + G+L++      +AL ++P+   V   +       +++  AI   +        +   
Sbjct: 20  LKSGNLDAVIECFREALLLNPNFAEVHNTIGMIQFQIEKYEGAIQLFDNALSMNPNFAEA 79

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                +ARS              D  +++ L  N + A I  A + 
Sbjct: 80  YNNRGLARSKICHKSEFPKV-IEDYTKAIALNPNLVQAYINRADTY 124


>gi|301062320|ref|ZP_07202984.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300443585|gb|EFK07686.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 287

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 85/269 (31%), Gaps = 44/269 (16%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-------- 178
             I   +       +  E ML +    E   Y+L       G+L  A  Y          
Sbjct: 1   ANILERQGNNTELRKVYEKMLSLDPANEAVSYNLGVLEYEDGNLKRALPYFENYAKNHPE 60

Query: 179 -----------------------KAL---DISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                                  KAL   D+ PD+    + V +      E+ + I+ L 
Sbjct: 61  DVTVQEILFDIYRKENNASAAYEKALLLLDLKPDSIEPYDFVFEYLKKKGEYDQLISVLK 120

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
              KN  +       L  A        G +        + LK    S  A +      I 
Sbjct: 121 SGLKNHPDQIHLNEYLATAY----LKAGKVDLGIGIIKKLLK-DPKSQAAPLLNELFEIL 175

Query: 273 QNKKRKAE--VILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVES 327
             +K       I++K  K +P   +     I+ +L +   +  +    ++ E   + +E 
Sbjct: 176 VARKNYGAIIDIMKKGLKSDPENTVLREYLIFAYLKTGKELLAITEMEKILERKPDDLEL 235

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            + +++++ +   I +A       ++++P
Sbjct: 236 WLQLARLSEKKNLIPKAIKAYGRVLELSP 264


>gi|269791733|ref|YP_003316637.1| hypothetical protein Taci_0115 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269099368|gb|ACZ18355.1| Tetratricopeptide domain protein [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 409

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 58/168 (34%), Gaps = 12/168 (7%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A  ++ A+    +  +      R   +L I  +L     G +  +        +L    
Sbjct: 66  RAGRYAEALPVYQRVYQLRPV--RKDVVLRI--ALCQERLGRLNDAMDSFDLQSRLDPKD 121

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWK---VNPH--PEIANIYTHLLSENTVGKLKRA 314
               +   + L+S  +  +A   L++  K    +P+    +A  Y  + S +    +K  
Sbjct: 122 PRPLLGKGRILLSLGRPEEALGPLKRAQKLSSSSPYSNRLLAEAYRRVGSHDMA--IKHL 179

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            +L        E +++ +K   ++   + A       ++++P      
Sbjct: 180 -KLSAERDRDPERVLMDAKDLFQLKDFEGARWAFERTLELSPDHRGAR 226


>gi|196250085|ref|ZP_03148779.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
 gi|196210269|gb|EDY05034.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
          Length = 220

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 3/153 (1%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL  + A     A +  S    +H   ++   Y+    +  A  +   A E     L +
Sbjct: 7   QGLAHMRAGEYEEALRCFSEAVNEH--PDDPAGYINIGTVLAAAGEEEKALECFRQALML 64

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 A Y +     R      A+    +AL +  +       +       +    A+ 
Sbjct: 65  DERAAAAYYGIGTVHYRREQFAQAKDMFERALALGLNDADTHFMLGMSLCRLEMPRLALP 124

Query: 210 FLNQKKK-NAKEWNRNRAILLIARSLENADKGD 241
           +L +  + N ++      + L   +L+  D+  
Sbjct: 125 YLQRAAELNEEDAEALFQLGLCLAALDYVDEAK 157


>gi|253701035|ref|YP_003022224.1| hypothetical protein GM21_2423 [Geobacter sp. M21]
 gi|251775885|gb|ACT18466.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 415

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 69/209 (33%), Gaps = 17/209 (8%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            ++  A    E  +Q+      +   Y     +    D   A      A +++P+AP V 
Sbjct: 210 GRHEEAIAYYERAVQVDPNHANSRNNYGSALMALGRFDQ--ALEQCNLAAELAPEAPLVK 267

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +   +++ +++  A     +    A + N  +A   +  ++E    GD        ++
Sbjct: 268 VNLGNIHLMKQQYDEARGSFEKAL--ALDANLAQAHFGLG-AVEQKLGGDARRVRELYLK 324

Query: 252 SLKLCDNSIM------ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
           +++L  + I       A + A +          A   L++        +  +    L   
Sbjct: 325 AIELAPS-IPQFHHALAKLLAGEGEEEALSHFAAAEKLDQA-LPELQRDFGSTCLGL--G 380

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKI 334
                LK      E N E   +  I++  
Sbjct: 381 RWEEGLKHLETAIEQNPEDAVTREILAMA 409


>gi|158337349|ref|YP_001518524.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158307590|gb|ABW29207.1| TPR domain protein, putative [Acaryochloris marina MBIC11017]
          Length = 738

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 69/216 (31%), Gaps = 39/216 (18%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHS-------YVSQQHTFHNEYLVYLLEVQIALAER 134
           D   KA   G ++ A   +  +++ H           +     ++        Q A   +
Sbjct: 195 DSRSKASALGSIAQAYGQLKDSQRAHKILHQALQQAEKIDHSWDKSSALGSIAQAAGQLK 254

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A E L+ +LQ              ++ +    +     A  A  +        E +
Sbjct: 255 DSQRAQEILQQVLQ--------------QAEKGEKASVLGSIAEAAEQLKDAQR-AQEIL 299

Query: 195 -VQQYVLA---KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
            +           W +A    N  +   +  +  RA  ++ ++L+ A+K D   S   A+
Sbjct: 300 YLALQQAEKIYGSWEKASALHNIAQAYGQLNDSQRAQEILQQALQQAEKIDDSRSKASAL 359

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            S+             A++    N  ++A  IL + 
Sbjct: 360 GSI-------------AQTAEQLNDSQQAYKILHQA 382


>gi|167648884|ref|YP_001686547.1| TPR repeat-containing protein [Caulobacter sp. K31]
 gi|167351314|gb|ABZ74049.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter sp. K31]
          Length = 490

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 42/138 (30%), Gaps = 6/138 (4%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A      A  + P        + +  + A +   A+  L++  + A       A      
Sbjct: 318 ALTQLEVAARLRPSDGETLRFLGEAQIRAGQTDVAVETLDKSMRIAPS-----AGAAYWL 372

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +           +   A  +  +  ++    +  A +    + + KA     +   ++P 
Sbjct: 373 AEGFIQTKQFERAVEAANAATTMDSSNPHVWLLLAIAAAKHDDREKALKAARRAVDLDPD 432

Query: 292 HPEIANIYTHLLSENTVG 309
           HP  A   T LL   T  
Sbjct: 433 HPAFAAHLTFLLESETPA 450



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
             H ++A +   L  +     L +      +     E+L  + +  +  G  D A     
Sbjct: 300 QAHFDLAQVLIGL--DRWPQALTQLEVAARLRPSDGETLRFLGEAQIRAGQTDVAVETLD 357

Query: 350 LAMKIAPRKEIFLLLAQ 366
            +M+IAP       LA+
Sbjct: 358 KSMRIAPSAGAAYWLAE 374



 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 8/146 (5%)

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +PD P     + Q  +    W +A+T L    +       +    L          G  
Sbjct: 294 AAPDDPQAHFDLAQVLIGLDRWPQALTQLEVAARLRP----SDGETLRFLGEAQIRAGQT 349

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK---VNPHPEIANIY 299
             +     +S+++  +   A+   A+  I   +  +A             NPH  +    
Sbjct: 350 DVAVETLDKSMRIAPS-AGAAYWLAEGFIQTKQFERAVEAANAATTMDSSNPHVWLLLAI 408

Query: 300 THLLSENTVGKLKRALRLEEINKESV 325
                ++    LK A R  +++ +  
Sbjct: 409 AAAKHDDREKALKAARRAVDLDPDHP 434


>gi|298505811|gb|ADI84534.1| TPR domain protein [Geobacter sulfurreducens KN400]
          Length = 617

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 24/82 (29%), Gaps = 2/82 (2%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +AA N   A  +    +    F+   L  L     + A      A +    ++       
Sbjct: 212 LAAGNHAAALPLLKQFANDERFNPRALYLL--ADASRAAGDLKTASDAYNRIVLNYPGEL 269

Query: 155 FAVYSLYFESCRIGDLNSAQRY 176
            A   L F     GD+  A   
Sbjct: 270 TACKGLLFCLRHRGDVEEALEL 291


>gi|238763547|ref|ZP_04624508.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           kristensenii ATCC 33638]
 gi|238698179|gb|EEP90935.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           kristensenii ATCC 33638]
          Length = 239

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 56/162 (34%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+   N A + LE  +        A   + F   RIG+ ++A++   +A+
Sbjct: 25  TRLQLGLEYLAQGDLNAARQNLEKAVAADPQDYRAQLGMAFYEQRIGENSAAEQRYQQAM 84

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +    +        ++         A++ D
Sbjct: 85  KLAPGNGTVLNNYGAFLCSLGQYVSAQQQFSAAVLSPDYGQVADSLENAGYCFLRANQND 144

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 145 --QARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 184


>gi|121595214|ref|YP_987110.1| HemY domain-containing protein [Acidovorax sp. JS42]
 gi|120607294|gb|ABM43034.1| HemY domain protein [Acidovorax sp. JS42]
          Length = 427

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 53/415 (12%), Positives = 117/415 (28%), Gaps = 54/415 (13%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   + +  +  + +   +   +    V++ W       S  ++L +L+           
Sbjct: 1   MRAALWFLALFGVAVAVALFAGNNQGTVTLFWPPYRIDLSLNMVLMLLFGGFTLLYAALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119
                L  P         +     + AL   L  +       ARK   S ++Q+    + 
Sbjct: 61  ALAALLELPMQARRWRLLQKERAMHGALLDALSQMLGGRFLRARKSAESAIAQERALEDA 120

Query: 120 Y-----------LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
                       L +++  + + A +        L+  L     R  A+     +  R G
Sbjct: 121 KEALPHGRRLRTLAHMVAAESSHALQDRATREAHLQQALDNIPDRAAAI----EQELREG 176

Query: 169 DLNSAQRY------ATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAITFLNQKK 215
               A R+      AT AL+     P           A ++   L+ +  +A+       
Sbjct: 177 AQLRAARWSLDERDATTALERLSVLPAGTARRTLALRAKLKASRLSHQTEQALETARLLG 236

Query: 216 KNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
           K+          ++   ++E  +   D        +            ++ AA+ L    
Sbjct: 237 KHHAFSPAAAESIVRGLAMELINGAYDPAQLQRIWLGLEPHERAMPEIAVHAAQRLGQLG 296

Query: 275 KKRKAEVILEKIW-----------KVNPHPE-----IANIYTHLLSENTVGKLKRALRLE 318
                + +  + W              P P+     +       L       L R    +
Sbjct: 297 ----GDAMQVRAWLLPVWERMTDPAQPPLPDAQVLKLVRALEGSLQALDANWLARIESAQ 352

Query: 319 EINKESVESLVIVSKIALEMGSIDQAH----AKAMLAMKIAPRKEIFLLLAQIEQ 369
           +    +     + +K  L+     +A       A      + R   +  LA++ +
Sbjct: 353 QAAPRNARLQYLSAKACLQRNLWGKAQQLFTQAAQQLRDASLRASAWRHLAELAE 407


>gi|87301653|ref|ZP_01084493.1| TPR domain protein [Synechococcus sp. WH 5701]
 gi|87283870|gb|EAQ75824.1| TPR domain protein [Synechococcus sp. WH 5701]
          Length = 461

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 5/127 (3%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             +   A R   +AL I P        + Q          A     +  +   +++   A
Sbjct: 10  RKNNEEALRVVLQALQIEPGHLEALTVLAQILEKLGRPDEASAIWRKAAELGPDFS--PA 67

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--ASICAAKSLISQNKKRKAEVILE 284
           +L +A  L   +  D ++     IE + L  + +   A    A  L  + + +KA   ++
Sbjct: 68  LLGLAELLMQEEATDALSQARQLIERV-LAKDRVSGEAYAALANLLNREGEHQKATTAMQ 126

Query: 285 KIWKVNP 291
              + +P
Sbjct: 127 VAMEADP 133



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 46/163 (28%), Gaps = 5/163 (3%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREF 155
           N   A ++     Q    H E L  L   QI     + + A        +     +    
Sbjct: 12  NNEEALRVVLQALQIEPGHLEALTVL--AQILEKLGRPDEASAIWRKAAELGPDFSPALL 69

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +  L  +      L+ A++   + L     +     A+        E  +A T +    
Sbjct: 70  GLAELLMQEEATDALSQARQLIERVLAKDRVSGEAYAALANLLNREGEHQKATTAMQVAM 129

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +   E    +AI      ++    G    +     E+  +   
Sbjct: 130 EADPENLAFQAIARRNLGIQLFSTGTFSEAAWAHYEARWIEPG 172


>gi|325109980|ref|YP_004271048.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324970248|gb|ADY61026.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 482

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/161 (9%), Positives = 42/161 (26%), Gaps = 12/161 (7%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV- 157
           +  +A             H   L  L          Q   A       +           
Sbjct: 177 DGGVAD--FKAAVALQPKHMASLTAL--ADAYAMAEQNENALAAFNQFIAAYPEHPIGYN 232

Query: 158 -YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              ++    ++ D  +A +   KA+++ P        +    + + + + A    +    
Sbjct: 233 NRGMF--HKQMDDTQAALQDFQKAVELQPKFFVAQINLGYMLMESGKPAEAEKVFSNAIA 290

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                      +   R+     +G    +  D  ++++L  
Sbjct: 291 ----LQEQNPSVYGLRANVRMRQGKSQEAIADYEKAIELFP 327


>gi|302554399|ref|ZP_07306741.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302472017|gb|EFL35110.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 987

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/245 (10%), Positives = 67/245 (27%), Gaps = 30/245 (12%)

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
                     E+ R      A  +A +A +      W  + +    +    W+ A   L 
Sbjct: 666 EVVGGRGEAVEAARH--ALEAAHWADEAGEGVTLGAWARQQLGGFLLRQGRWAEAAEVLE 723

Query: 213 QKKKNAKEWNRNRAILLIAR------SLENADKGDMIASYHDAIESLKLCD---NSIMAS 263
               +          ++  +        E  +          A E  +      +    +
Sbjct: 724 SALPDLSAETHGDGAIVQTQWWLGDCLSELGEHRAAAERRLQAAEIARHWPEQHDHATLA 783

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322
             A +SL       +A+    +           +++  L +   + +  RA     +   
Sbjct: 784 HLAGESLGQAGLPAEADRAYARA---------GDLWRELGNVQGLVRSLRARAWIALRAP 834

Query: 323 -ESVESLVIVS------KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
               E+  +++      + A +  +  +A  +     ++      F  L     + S + 
Sbjct: 835 GGLAEARDLMADAFRECEAARDTAADVEARQQ--YVAELGNTHRQFGDLLARSVSGSPDD 892

Query: 376 DKILY 380
           D +  
Sbjct: 893 DCVRA 897


>gi|296132638|ref|YP_003639885.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR]
 gi|296031216|gb|ADG81984.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR]
          Length = 217

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 2/128 (1%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A      A  +          +    +           + Y+ A   +E +++      
Sbjct: 80  LARGENQKA--VAELEKAYKLNNKHLGIRFNLGLAYKETKNYDKAITLMEGIVKENPFHF 137

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             + +L     +      A +   +AL I+P A  V     Q Y    +  +A+  +NQ 
Sbjct: 138 LGIVNLGVLYDQKNKFQQALQMYERALQINPGAADVYLLRGQTYAHMGDKQKALENINQA 197

Query: 215 KKNAKEWN 222
            +   ++ 
Sbjct: 198 LRFVPDYK 205


>gi|288940558|ref|YP_003442798.1| response regulator receiver protein [Allochromatium vinosum DSM
           180]
 gi|288895930|gb|ADC61766.1| response regulator receiver protein [Allochromatium vinosum DSM
           180]
          Length = 539

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 62/231 (26%), Gaps = 17/231 (7%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           +     +  + + Q           L   +I   ++ ++ A E    +++         Y
Sbjct: 177 DSNRLDEATATLEQVLAIREMPWARLGIGKIQFLKKNFDQAAETFRQLIE-QDANFIGAY 235

Query: 159 S-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L            A+     A+ +SP        +    +       A     +    
Sbjct: 236 DWLAKTQTAQRRFAEAEETLRTAVRLSPRGIGRQHTLGDIALNNGHPEIAEAAYERAVGL 295

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK--SLISQNK 275
           AK    N   +    +   +       +   A E  K+  +   A   AA   +LI   +
Sbjct: 296 AKYSVLNHPAIFAGLAKSKSANNKHDEALKVANEIHKVFPDREEAVFYAASTSALIKTRQ 355

Query: 276 KRKA-------------EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
             KA               + E         E+A  Y  L  E+    L R
Sbjct: 356 GDKAGAEAALAEAEEALARLNETAHTAEHALEMAKTYAGLGREDKAATLLR 406


>gi|221633744|ref|YP_002522970.1| hypothetical protein trd_1771 [Thermomicrobium roseum DSM 5159]
 gi|221156831|gb|ACM05958.1| Tetratricopeptide repeat family [Thermomicrobium roseum DSM 5159]
          Length = 511

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 32/87 (36%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             + ALAE + + A    + + +        +      S + GD  +A+R     L+  P
Sbjct: 12  RARRALAEGRLDEAKGLCQAIRRAVPEALVGLRLWSEVSRQEGDAETAERLLEVVLERDP 71

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLN 212
           +      A+ + +    +   A+  L 
Sbjct: 72  EDAEAWCALAELHRARGDKEAALRLLQ 98


>gi|197103965|ref|YP_002129342.1| TPR domain protein [Phenylobacterium zucineum HLK1]
 gi|196477385|gb|ACG76913.1| TPR domain protein [Phenylobacterium zucineum HLK1]
          Length = 761

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 90/291 (30%), Gaps = 45/291 (15%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKAL 181
            L   Q AL   +   A   L  +L     +   VY  L  +  R G  + A+R+A + L
Sbjct: 4   RLAAAQAALNGGRAAEAVGHLTALLNDAPDQPLGVYHTLAIQLYRAGRYDEAERWARQGL 63

Query: 182 DISPDAPW---VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
           +  P A     +   ++++                               +   +  + D
Sbjct: 64  ERHPRAADLMNLHGVLLRRLGRP-------AEAAAALAAVLRLQPKNTSAMSNLANVHLD 116

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW---KVNPHP-- 293
           + D  A+    ++ ++L            ++L+ Q +   A     +     + NP+   
Sbjct: 117 RDDPAAAEAVLLQLVRLEPKKAEHHRLLGRALLRQGRHDPALARFRQAILLERTNPNTWL 176

Query: 294 EIANIYTHL-LSENTVGKLKRALRLEEINKE---------SVESLVIVSKIALE---MGS 340
           ++A +   L  ++  V  + RA  L     +           E  V  ++  L       
Sbjct: 177 DLAGLLMELRRNDEAVETMARAAELFPTEPKFRQGPVILLRREGRVAEAEAVLAKALEAD 236

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             QA A   L    A            E+AN H         + AL   PD
Sbjct: 237 ERQAWAHRELGGLYADTDR--------ERANRH--------LRRALELQPD 271


>gi|308049646|ref|YP_003913212.1| tetratricopeptide repeat protein [Ferrimonas balearica DSM 9799]
 gi|307631836|gb|ADN76138.1| tetratricopeptide repeat protein [Ferrimonas balearica DSM 9799]
          Length = 386

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 5/165 (3%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           L  G +      +  + ++H  +  +   +F    L  +   +  LA   Y+ A E    
Sbjct: 73  LSLGTLFRKRGEVDRSIRIHQNLIARPHISFEQRDLAMMELGKDYLAAGLYDRAEEIFLQ 132

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKE 203
           +++ P   E +   L        +   A R A +    S  A  P V     +     ++
Sbjct: 133 LVKDPDHSEESERQLLSIYQATKEWWKAIRVAKRFRRASRKALMPTVAHYYCELAAQEQD 192

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +  I  LN   K   +  R   + L   +L      D IA++  
Sbjct: 193 SATVIKLLNTALKTDSDCARAN-VQLARLALSEERHDDAIAAFER 236


>gi|225619316|ref|YP_002720542.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214135|gb|ACN82869.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 229

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 64/178 (35%), Gaps = 27/178 (15%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIAR-----SLENADKGDMIASYHDAI 250
            Y   +++   +   ++  +      R  +A +++        + +  + ++I +    +
Sbjct: 48  AYAQIQDYDNTLQVFDKIMRRLDNPLRLMQAHIIVGYIYAVKEMYDLAEFELIDALSSGV 107

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---------IANIYTH 301
           E+ +     I A++        +   RKA   L+K   ++P+           +A+  T+
Sbjct: 108 ENTQ-----IHAAL--GYVYYKKGNIRKAIDHLKKAVNLDPNSANARNSLGFILADTETN 160

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           +        ++   +   I+  +   L  +    L+    ++A      A ++AP   
Sbjct: 161 IEEG-----IEEIRKALSIDPNNPAYLDSLGWAFLKKNDFERAKEFLTKAFELAPTNR 213


>gi|254525310|ref|ZP_05137365.1| tetratricopeptide repeat domain protein [Stenotrophomonas sp.
           SKA14]
 gi|219722901|gb|EED41426.1| tetratricopeptide repeat domain protein [Stenotrophomonas sp.
           SKA14]
          Length = 564

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 92/277 (33%), Gaps = 23/277 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +      +++ +S+Q    +     LL  +IA   ++Y  A +    +       E  +
Sbjct: 291 GDKAALSNLYNELSRQAAKPDPAQ-RLLLGKIAEYLKRYPEAVQWYHSVPGGDELSEARL 349

Query: 158 YSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +   ++        L+      + A+              +    A + +  +  L + 
Sbjct: 350 RAANAQALAGRLPLALDEVHAIQSDAVVDDDVRRDAYLLEAELRQRADDSAGELDALARG 409

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQ 273
                + N     LL AR+L    + D+  +  D  + L     ++ A +          
Sbjct: 410 LAAYPDDNG----LLYARALTWERRDDIPRAEADLRKILVTDPENVPALNALGYTLADRT 465

Query: 274 NKKRKAEVILEKIWKVNPHPEIAN--------IYTHLLSENTVGKLKRALRLEEINKESV 325
            + ++A  ++++       P+ A         +Y     E  + +L+RA  L +      
Sbjct: 466 GRLQEALELIDRARVAE--PDNAAIVDSYGWVLYRLGRKEEALVQLRRAWTLAK----DP 519

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           E    V ++   +G  D+A      A K+ P     L
Sbjct: 520 EIAAHVGEVLWVLGKHDEARHFFEEAAKLDPENRALL 556


>gi|149923552|ref|ZP_01911952.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149815571|gb|EDM75103.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 1031

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 65/178 (36%), Gaps = 21/178 (11%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSA 173
           E L +L ++Q    E+ ++   + LE + +        ++      L + + ++ D  SA
Sbjct: 359 EALGHLEQMQ--EREKDWDALSKTLETLCEVTDDEKKKSQYLVKLGLLY-ADKLDDNPSA 415

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKE-------------WSRAITFLNQKKKNAKE 220
            R   K  ++ P      +A+ + Y+   +             WS  I  L ++  + ++
Sbjct: 416 IRTWEKLHELDPKNRRAADALKKLYLAEGDMDSLESFYAKQDKWSEFIRVLEREADSTED 475

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             R   + L   +L     G    +     ++L   +N++  +    +       +R 
Sbjct: 476 SERTTTLTLKIANLYKTQIGKPDRAIRSLEKALGKDENNLTMAEALLELYEEAGDERN 533


>gi|115375750|ref|ZP_01463003.1| probable serine/threonine-protein kinase PknB [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367224|gb|EAU66206.1| probable serine/threonine-protein kinase PknB [Stigmatella
           aurantiaca DW4/3-1]
          Length = 648

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 59/202 (29%), Gaps = 13/202 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQI 149
           LM + AH   L+            F  +   +LLE + A  L   +   A   +E    +
Sbjct: 410 LMELGAHEAVLSLSETFTQR----FPQDLEAHLLEARAATALLMGKR--AERSIEEASSL 463

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  + +L     R GD+  A     KA +  P    V          +     A  
Sbjct: 464 APKDVRPLLALADLRERQGDVPGALGALAKAYEKRPREARVAPRYGLLLSQSGRLDEAAE 523

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L    +       N A  L   +     +  M  +      +L+      +A       
Sbjct: 524 VLGAWIR-----EHNDARPLAELAFVRYRQARMEDAAALLKRALRKAPRLAVAHYYLGAV 578

Query: 270 LISQNKKRKAEVILEKIWKVNP 291
           L  +     AE    +  +++P
Sbjct: 579 LFQKGDTAGAERAYRQADQLDP 600


>gi|33864672|ref|NP_896231.1| hypothetical protein SYNW0136 [Synechococcus sp. WH 8102]
 gi|33632195|emb|CAE06651.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 254

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 3/143 (2%)

Query: 87  ALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           AL   G + +A  +   A  +            E   +L       + + +  A      
Sbjct: 58  ALSNRGNVRLALGDPDGA--IADQARSIELAPEEPDPHLNRGTAEESIQDWAAAEADYLW 115

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           +L+  AT   A+Y+L       GD +SA+R   +A    P       +        ++  
Sbjct: 116 ILERDATDASALYNLGNVRGSTGDWDSARRLYEEAAHARPGFAMARSSAALAAWQQQDLV 175

Query: 206 RAITFLNQKKKNAKEWNRNRAIL 228
            A   L +  +    +   RA L
Sbjct: 176 WAEAELRKLIRRYPLFADARAAL 198


>gi|148549748|ref|YP_001269850.1| hypothetical protein Pput_4546 [Pseudomonas putida F1]
 gi|148513806|gb|ABQ80666.1| hypothetical protein Pput_4546 [Pseudomonas putida F1]
          Length = 266

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 4/106 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
               +S         L  L   +       +N A   LE   +I       +Y L     
Sbjct: 150 ATGGLSADEQLDGPVLALLTTAKTQQGSGDFNGAASSLERAQRIAPREPQVLYRLAQVRL 209

Query: 166 RIGDLNSAQRYATKALDIS---PDA-PWVTEAVVQQYVLAKEWSRA 207
             GD   A++ A +AL  +   P     +   + Q      + + A
Sbjct: 210 SQGDAAQAEQLARRALTYANGRPSLQAELWNTIAQAREKQGDSAGA 255


>gi|325114290|emb|CBZ49847.1| fkbp-type peptidyl-prolyl cis-trans isomerase,related [Neospora
           caninum Liverpool]
          Length = 819

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 17/124 (13%)

Query: 75  MLHKRNYDKGYKALYTGLMS------IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
              K N+++   AL   LMS      +            S    Q    + + V L   Q
Sbjct: 671 WFKKGNFER---ALRRYLMSEKYLEYLGGG--------ASESDTQRARPDLHAVRLNAAQ 719

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A  +++ A    E +L+        ++ L       GD  +A+R A +AL + P   
Sbjct: 720 CYNALGKFDQAKGYCEKVLKEDPENVKGLWRLSVAFAGQGDYLAAERTAQQALALKPQNA 779

Query: 189 WVTE 192
            V +
Sbjct: 780 EVLQ 783


>gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
            racemifer DSM 44963]
 gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
            racemifer DSM 44963]
          Length = 1170

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 90/248 (36%), Gaps = 22/248 (8%)

Query: 113  QHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA-TREFAVYSLYFESCRIGDL 170
             H   +   + L + Q      +Y  A   +E  +   P   R      L  E  +    
Sbjct: 904  LHLNPDTIALRLDQGQFLYTLGRYEEALAAVEQALRLDPEDIRAL----LLEEGIQSARS 959

Query: 171  NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +  Q    + + ++     V + V++                ++++ A   + +R   L+
Sbjct: 960  SGTQPERRRGIPLASQIEMVPDKVLEAL--------------KRQEEAMHPDPDRIEKLV 1005

Query: 231  ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
            AR  +   +     +     +++ L  N   A    ++ L+  + K+ A  +LE+  ++N
Sbjct: 1006 ARGKDLFKRKQYNEALEVIEQAIGLDPNHAEAYEVKSRVLVGLSLKKAALEVLEQAIRLN 1065

Query: 291  PHPEIANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            P+    + Y  LL E    +  LK   +    +     +  +  KI L +   ++A  + 
Sbjct: 1066 PYYSDYSSYGLLLHELGRHREALKAFEQHIHFDPGFAPAYFMKGKILLFLKRYEKALIEF 1125

Query: 349  MLAMKIAP 356
              A+ + P
Sbjct: 1126 ERAIHLDP 1133



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 83/271 (30%), Gaps = 48/271 (17%)

Query: 125  LEVQIALAERQYNIAHEKLEMMLQIPATREFAV--------YSLYFESCRIGDLNSAQRY 176
            L   + + ER    A +  E MLQ        +              +        A   
Sbjct: 815  LGAVLRMLERD-EEALDVYEQMLQ------LGLGSADLYLSQGGALYALER--YEEALVA 865

Query: 177  ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
              +AL + PD      A  Q     + +  A+    Q      +       L + +    
Sbjct: 866  VEQALRLDPDNIASHLAQGQILYSLEHYEEALVVAEQTLHLNPD----TIALRLDQGQFL 921

Query: 237  ADKGDMIASYHDAIESLKLCDNSIMASIC-----AAKSLISQNKKRKA-----------E 280
               G    +     ++L+L    I A +      +A+S  +Q ++R+            +
Sbjct: 922  YTLGRYEEALAAVEQALRLDPEDIRALLLEEGIQSARSSGTQPERRRGIPLASQIEMVPD 981

Query: 281  VILEK----IWKVNPHPEIANIYTHLLSENTVGKLKRALRLE------EINKESVESLVI 330
             +LE        ++P P+          ++   + +    LE       ++    E+  +
Sbjct: 982  KVLEALKRQEEAMHPDPDRIEKLV-ARGKDLFKRKQYNEALEVIEQAIGLDPNHAEAYEV 1040

Query: 331  VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
             S++ + +     A      A+++ P    +
Sbjct: 1041 KSRVLVGLSLKKAALEVLEQAIRLNPYYSDY 1071


>gi|222527124|ref|YP_002571595.1| transcriptional activator domain-containing protein [Chloroflexus
           sp. Y-400-fl]
 gi|222451003|gb|ACM55269.1| transcriptional activator domain protein [Chloroflexus sp.
           Y-400-fl]
          Length = 1117

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 55/156 (35%), Gaps = 21/156 (13%)

Query: 207 AITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
           A + L +  +     E    RA +L   +    + G    +     ++ +L   S  A +
Sbjct: 499 AESVLQEALRVSEGLEDQVARARVLELLAENKLNMGQPDEAEALQQQARQLRAASPAADL 558

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
            +A+  +   +   A   L + W+                     ++  A       +  
Sbjct: 559 LSARVKLRTGQL-AAARTLLQAWR------------------DRERVATARGATPAPRGH 599

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            E++++++ IA   G +DQA + A   +++   +  
Sbjct: 600 REAVLVLALIAAFEGDVDQALSLAEEGVQVGTERHS 635


>gi|124515674|gb|EAY57183.1| protein of unknown function [Leptospirillum rubarum]
          Length = 587

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 41/310 (13%)

Query: 114 HTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
               +  +    +L  +      Q   A + +  +L+        +  +      + +  
Sbjct: 188 LVEQDPAITEHQILYARALERNNQIRKAIKHVRTLLKTNPKNPVLLKEIGRLLLNLNEHT 247

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            +      +++ + ++      +   Y  + +    I  + +      +      +L + 
Sbjct: 248 RSIDSLRLSMESAGESAETHYFIAMAYKASGKPLAGIEAIKRALSMEPDNPEYETLLGLL 307

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             ++  +      ++    E+                  + +    KA       ++ +P
Sbjct: 308 Y-IDLGEPDKAFTAFQSLEEAFPFRS--------LGDLYLRKKSSNKAITAYMTAFEKDP 358

Query: 292 HPEIAN-------------------IYTHLLSENTVGKLKRA---LRLEEINKES----- 324
            P                        +  +L  + +   K+      L    ++      
Sbjct: 359 DPRTGLLLLKLLSSRKDWFLFFETLAWMEILFPDKIE--KKFLTDKLLSRWKEDQDFPLT 416

Query: 325 -VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
             ESL I +      G+ + A      A+   P  E+   +  + +    N +  L W  
Sbjct: 417 PAESLAIRALSLYFAGNREAAFPLLEQAVLADPLSEVLYWMLGLLEEERGNKEAALTWYG 476

Query: 384 SALHAMPDPL 393
             LH+  +P+
Sbjct: 477 RILHSTREPV 486



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 102/341 (29%), Gaps = 63/341 (18%)

Query: 68  CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
            PA +   L  ++ +  Y A    L+         +  +         F     + +L+ 
Sbjct: 8   SPAPIPSELDAKSQENSYIARVQTLL----GEEKTSAALDLLDEGLRLFPVSSPLLVLQG 63

Query: 128 QIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           +   + RQ+  A       L+ P            SL       G+   A  +  + L +
Sbjct: 64  KAFESMRQWEKAEGCYWRSLKEPFSPVPESFL---SLAQVRHVSGEPEKALWFLEEGLSL 120

Query: 184 SPDAPWVTEAVVQQYVLAK---EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
            P      + + +  +      +W  A   + +   +    ++ + +L     LE     
Sbjct: 121 FP---ENNDLLREAGIQNGLLGQWWLAFGRIRKAFVDQP--SKTQNMLAYGALLERLSFA 175

Query: 241 DMI-ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------- 291
           D++        + ++         I  A++L   N+ RKA   +  + K NP        
Sbjct: 176 DLLPELIPLYEKLVEQDPAITEHQILYARALERNNQIRKAIKHVRTLLKTNPKNPVLLKE 235

Query: 292 -------------------------------HPEIANIY-THLLSENTVGKLKRALRLEE 319
                                          H  IA  Y         +  +KRA     
Sbjct: 236 IGRLLLNLNEHTRSIDSLRLSMESAGESAETHYFIAMAYKASGKPLAGIEAIKRA---LS 292

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           +  ++ E   ++  + +++G  D+A        +  P + +
Sbjct: 293 MEPDNPEYETLLGLLYIDLGEPDKAFTAFQSLEEAFPFRSL 333


>gi|114797169|ref|YP_761964.1| hypothetical protein HNE_3291 [Hyphomonas neptunium ATCC 15444]
 gi|114737343|gb|ABI75468.1| hypothetical protein HNE_3291 [Hyphomonas neptunium ATCC 15444]
          Length = 705

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D   A+    +A  + PD  W    + +    A + S A       +K A   +R   I 
Sbjct: 203 DTAKARAAYEEAFRLQPDDFWTCIELARLRREAGDLSGARLAAEAAEKVAGN-DRENMIA 261

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICAAKSLI 271
                    + GD+ A+      + ++          S+ A + L 
Sbjct: 262 ANDAGDICQEAGDLEAARLRYEAAHQISQKLAHENPLSVGAQRDLA 307


>gi|56551659|ref|YP_162498.1| tetratricopeptide domain-containing protein [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|56543233|gb|AAV89387.1| Tetratricopeptide domain protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 341

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             ++   A    +    +    ++ R   L  R+  +   GD   +  D  ++LKL    
Sbjct: 182 ANQDPGAARNAFDHALMSPVMPDKMRGNTLSDRARADVAVGDYAIARQDIDKALKLIPKD 241

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             A + +A     Q    +A+  + +  K  P
Sbjct: 242 ATAWLMSATLARHQGDLTRAKNDITEAEKFAP 273


>gi|237723675|ref|ZP_04554156.1| tetratricopeptide repeat family protein [Bacteroides sp. D4]
 gi|229437886|gb|EEO47963.1| tetratricopeptide repeat family protein [Bacteroides dorei
           5_1_36/D4]
          Length = 471

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 66/191 (34%), Gaps = 24/191 (12%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           SP + W  +      ++ ++ ++A    ++  K     N+  A LL+       D+G   
Sbjct: 22  SPGSEWSLQVKQAATMIKEDPAKASEAFDELLKGK---NKKNAFLLVEIGRAYLDQGKTA 78

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-----------ILEKIWKVNPH 292
            +   A  +  +     +A + +    ++ N   KA               E  +K    
Sbjct: 79  EAAEYAQRAKDINSKCAVAYLLSGDIALNLNDVNKASSDYNQAIYLDEDCSEAYFKY--- 135

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              A +Y  +  + ++  L R   L+    E       ++ +   MG   +A       +
Sbjct: 136 ---AQVYKGVDPQLSLDMLMR---LQSKTPEDNRISKELADVYYTMGQYGKAKEAYENYL 189

Query: 353 KI-APRKEIFL 362
           K+  P ++ + 
Sbjct: 190 KVGTPTEQDYT 200


>gi|256392914|ref|YP_003114478.1| hypothetical protein Caci_3735 [Catenulispora acidiphila DSM 44928]
 gi|256359140|gb|ACU72637.1| TPR repeat-containing protein [Catenulispora acidiphila DSM 44928]
          Length = 707

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 51/187 (27%), Gaps = 35/187 (18%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            + A      A+ +SP                 +   A+   +       E+   R    
Sbjct: 500 EDEAYADYETAIRLSPPFHEAFYNRGDIRAARGDVDGALADFDYVLDIDPEFVDARV--- 556

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             R+    + G+  A+  DA   L +  +        A    +  +              
Sbjct: 557 -NRAALLLELGEDAAAEQDARAGLAVDPD-------NAHLHTALGQI------------- 595

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                      + L  +T   L    R  + + E V +L   + +  +      A A   
Sbjct: 596 -----------NALRGDTEQSLAAFSRALDTDPEHVPALAGRAVVRFDAADHTAARADLD 644

Query: 350 LAMKIAP 356
            A+++ P
Sbjct: 645 EAIRLQP 651


>gi|225849105|ref|YP_002729269.1| tetratricopeptide TPR_2 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644218|gb|ACN99268.1| tetratricopeptide TPR_2 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 106

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 1/98 (1%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
              ++ + + P      +Y L  E  + G    A  Y  K L +  D       + Q Y+
Sbjct: 6   EALMKALEKDPN-NPLGLYGLALEFYKEGRYEDAIVYLKKYLSVYDDQGAAYRTLAQAYI 64

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
              +  +AI    +  + A+++N    +    + +E  
Sbjct: 65  NIGDIEQAIETYERGIEQARKYNHPTMVEEFRQEIERL 102


>gi|170588113|ref|XP_001898818.1| TPR Domain containing protein [Brugia malayi]
 gi|158593031|gb|EDP31626.1| TPR Domain containing protein [Brugia malayi]
          Length = 549

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 204 WSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + +A     +  +      +N  A+    R+      GD   S  D  ++++L    + A
Sbjct: 53  YRKAAETFTEAIRLCPTEQKNHLAVCYQNRAAAYDRLGDPERSIMDCTKAVELAPLYLKA 112

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +  A++ +S N+  +A   L   + + P
Sbjct: 113 VVRRARAYLSVNRPDEALDDLTYAFVMAP 141


>gi|50546495|ref|XP_500717.1| YALI0B10362p [Yarrowia lipolytica]
 gi|49646583|emb|CAG82962.1| YALI0B10362p [Yarrowia lipolytica]
          Length = 616

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 75/214 (35%), Gaps = 18/214 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +    + +   +   ++K        +    +   +  + Q+     +++ A E     L
Sbjct: 359 ITRSSIHLDTGDKAASQKDIELALALNAEDPDCYHH--QGQLYFLSEEFDKAIECYNKSL 416

Query: 148 QIPATREFAVYSLYFESCRIGDL-------------NSAQRYATKALDISPDAPWVTEAV 194
           ++  T   ++        + G+              ++      +     P    +    
Sbjct: 417 ELDDTFVPSLIFKANSHLKKGERVGQSNPIETRHLVDACFEVFEEGAKKFPKNADLWNYY 476

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIE 251
            +  +  +++S ++ +L++     KE N      + L++++L     + D   S     +
Sbjct: 477 AEALLSTQKYSESLRYLDKAIALEKEQNPTSMSVLPLVSKALVIFQTQKDFDTSVDLCKQ 536

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +L + D S +A    A+  +S  K  +A  + +K
Sbjct: 537 ALVIDDRSEVAIGTLAQLYLSAGKHDEAMKMFKK 570


>gi|19112878|ref|NP_596086.1| U4/U6 x U5 tri-snRNP complex subunit Prp1 [Schizosaccharomyces
           pombe 972h-]
 gi|12230438|sp|Q12381|PRP1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp1
 gi|1209391|dbj|BAA12033.1| TPR protein [Schizosaccharomyces pombe]
 gi|1217605|dbj|BAA12094.1| pre-mRNA splicing factor [Schizosaccharomyces pombe]
 gi|2894282|emb|CAA17050.1| U4/U6 x U5 tri-snRNP complex subunit Prp1 [Schizosaccharomyces
           pombe]
          Length = 906

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 35/261 (13%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E   + D+  A+    +A + + ++  +  A V+   +  E  RA   L + +  +   
Sbjct: 586 KERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARARIESGTE 645

Query: 222 N--------------RNRAILLIARSLEN---------------ADKGDMIASYHDAIES 252
                          ++RA+ L+  +L+                 DK  +  +    +  
Sbjct: 646 RIWTKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDKEQIELARDAYLAG 705

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
            K+C  SI   +  AK    Q+  R A V+ ++    NP  E   +    +        +
Sbjct: 706 TKVCPYSIPLWLLLAKLEEKQSVIR-ARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQ 764

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA-- 370
               L +  +E   S ++ ++    +    +A  K      +   +    LL  I +   
Sbjct: 765 VRAALAKALQECPSSGLLWTEA---IWLEPRAQRKTRATDALRKCEGNAHLLCTIARMLW 821

Query: 371 NSHNTDKILYWTQSALHAMPD 391
                DK   W   A+ A  D
Sbjct: 822 LEKKADKARSWFLKAVKADQD 842


>gi|320535488|ref|ZP_08035594.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320147680|gb|EFW39190.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 622

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 79/280 (28%), Gaps = 30/280 (10%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y  A   L   L I      A   L     R    + A+    +AL  +P    +    
Sbjct: 100 NYEKAIYALTKSLAINEASLEAKALLGLAYLRAKKASQARAVFEEALQKAPKNTRLNTGY 159

Query: 195 VQQY-------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-RSLENADKGDMIASY 246
           +          +   +   A   L     N  +    R  L  A R+L+         + 
Sbjct: 160 LNALFIEAVQILRKGDADTARQMLTFVINNNIDGVAPRLYLAHAFRALKAF-----PEAL 214

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---- 302
                +L    +        A  L        A  IL K        E+++ +  +    
Sbjct: 215 TQYKAALAFAPDDPALQWYPAAMLAQMGDIEGASEILSKAGINVKGDELSDQFLAIGTVR 274

Query: 303 --LSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
             L E    +   A R+   N   S E  +++++    MG    A      A K+ P   
Sbjct: 275 KHLEEGLWARAAGAARVYIKNFGSSAEVHLLMAEAQRNMGRFSAALNHCARAAKLEPDNP 334

Query: 360 I--FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
              + ++  ++QA          W + A           D
Sbjct: 335 FVHYCIMLCLQQAGR--------WEELAQEIPRAEAAGCD 366


>gi|255081975|ref|XP_002508206.1| PAF1 complex protein [Micromonas sp. RCC299]
 gi|226523482|gb|ACO69464.1| PAF1 complex protein [Micromonas sp. RCC299]
          Length = 1262

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 97/300 (32%), Gaps = 23/300 (7%)

Query: 75  MLHKRNYDKGYK-ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALA 132
             HKR  D+     +    +  A  N   A K+            + +  +L +  +   
Sbjct: 134 WQHKRREDREQMPCVSRAHLEFAKGNAIDAEKLLDEARGLKDGGKDNIGPMLWKALLLFK 193

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
             Q   A +  +  L++    +  V   +   + R+G+   A+    +ALD+ P+ P   
Sbjct: 194 RDQVADALQWYKRALRMHPGADAGVRLGIGACNLRLGNFEHARLAFQRALDLEPENP--- 250

Query: 192 EAVVQQ-YVLAKEWSRA-ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           +A++        E++    + L+   ++    +    +     +        +       
Sbjct: 251 DALLGLAQCELNEFTPVPESLLHGGDEDTDPASVEEKM----EAAAETYTAAVQRGLELL 306

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-------NIYTHL 302
             +     +    ++  A+  + +      + + +K+ +     E+A         Y   
Sbjct: 307 RRAFNADPHHPAVNVALAQHFLIKKDGASVDHLTDKLVRGTSTNELATPRLRAEAAYVRA 366

Query: 303 LSENTVGKLKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              +  GKL RA  +     +  ES       ++++ L  G    +   A  A    P  
Sbjct: 367 RLHHQDGKLDRAEAMYTAAVQMDESFAAAAFGLAQVYLAKGDHKSSMLYAERAYAAYPDS 426


>gi|197123805|ref|YP_002135756.1| hypothetical protein AnaeK_3414 [Anaeromyxobacter sp. K]
 gi|196173654|gb|ACG74627.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
          Length = 274

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 79/247 (31%), Gaps = 31/247 (12%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             +  E    G L+ A     KA+++ P +    + +   Y   K +  A+       + 
Sbjct: 18  RGI--ELADRGWLDEAINEFHKAIELDPSSAHAHDNLATVYSEKKLYREALNEYLTALRL 75

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +       L    +           +  +  ++++L  +   A +    +L  Q K  
Sbjct: 76  EPDSATAHYNLACFLATH-----GPDMAVVEYQDAIQLEPDHPDAHLNLGLTLADQGKTE 130

Query: 278 KAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +A   L    ++ P      H E+A +       +    +     +  +   + E+ + +
Sbjct: 131 EAVKELGVAIELEPSDPFPRH-ELAGLLMD--DGDYRAAIAHLKEVVRLEPSNFEAELDL 187

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLL-------LAQIEQANSHNTD 376
                + G   +A      A  + P           ++ L       L  + +A + + +
Sbjct: 188 GICYAQKGFYAEAERAYARAAALKPDDLLLNYDVAALYALWGKPAPALEALRKALAQDAE 247

Query: 377 KILYWTQ 383
           K+  W +
Sbjct: 248 KVRGWLR 254


>gi|91204003|emb|CAJ71656.1| hypothetical protein kustc0911 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 470

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 12/142 (8%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYN 137
           +  KAL       A   I   RK+   +   H     T  N+ L+  L  ++A+AE    
Sbjct: 318 RAAKALT------ARGEIKETRKLLDSIKALHGGQLSTEDNKDLLK-LRARLAVAEGSGG 370

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
                LE ++ +      A+  L   S R GD   A  Y  +A +I            Q 
Sbjct: 371 EEARVLEEIVGLDPLDGEALILLGQHSNRNGDTERAVFYYERAANIEKYEADARVRHAQL 430

Query: 198 YVLAKEWSRAITFLNQKKKNAK 219
            V   ++  A+  L + ++   
Sbjct: 431 LVGMGKYDEALPLLRKAQQLKP 452


>gi|330811248|ref|YP_004355710.1| response regulator, CheY family [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379356|gb|AEA70706.1| Putative response regulator, CheY family [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 535

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     + G +  A+    KAL + P  P + + +    V   +  +A   L +  + +
Sbjct: 203 GLGKLMFKRGQVGQAKAVYEKALKVFPMMPALYDGMADVLVAEGDTKQAQHVLEEAVRLS 262

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAI 250
               R ++ LL   ++ N D      +Y  A+
Sbjct: 263 PLAVRRQS-LLGKLAMTNEDYDTASRAYRQAV 293


>gi|323452370|gb|EGB08244.1| hypothetical protein AURANDRAFT_64256 [Aureococcus anophagefferens]
          Length = 1772

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 43/225 (19%)

Query: 198 YVLAKEWSRA-ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK-- 254
             L +    A +  +    K A   +      L        + GD   +     E+L   
Sbjct: 652 RCLGRRLDGAALGPVLAHLKEALALDCAHDGALAVYGAALLEAGDAKGARCVLEEALDPS 711

Query: 255 ---LCDNSIMASICAAKSL----ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
              L + +  A++     L    ++     KA   LEK  + N  P              
Sbjct: 712 AESLKEGAADAAVLTTTLLAVVDVADGDLPKARRTLEKAARANNTP-----------GQD 760

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML----AMKIAPR------ 357
             + +  + L          L   +  AL++    +A A A+      ++ +        
Sbjct: 761 GARGRAYVGLAAATWLHGFGLTACATKALDLALAGEARASALARVAGPLRDSFTPPELRA 820

Query: 358 ----KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD--PLWIS 396
               +  FLLLA          + +      A +A PD    W++
Sbjct: 821 ELDAERAFLLLAA---GELGPAEVV---ATKATYAAPDLGRAWLA 859


>gi|241761217|ref|ZP_04759305.1| TPR repeat-containing protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374124|gb|EER63621.1| TPR repeat-containing protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 341

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             ++   A    +    +    ++ R   L  R+  +   GD   +  D  ++LKL    
Sbjct: 182 ANQDPGAARNAFDHALMSPVMPDKMRGNTLSDRARADVAVGDYAIARQDIDKALKLIPKD 241

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             A + +A     Q    +A+  + +  K  P
Sbjct: 242 ATAWLMSATLARHQGDLTRAKNDITEAEKFAP 273


>gi|291303061|ref|YP_003514339.1| winged helix family transcriptional regulator [Stackebrandtia
            nassauensis DSM 44728]
 gi|290572281|gb|ADD45246.1| transcriptional regulator, winged helix family [Stackebrandtia
            nassauensis DSM 44728]
          Length = 1097

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 54/231 (23%), Gaps = 29/231 (12%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA----LAERQYNIAHEKLEMM 146
            G +     +   AR      +       +     L  Q              A       
Sbjct: 817  GFVHNLDGDTSTARHHLEQAADHFERLGDRWGRFLTAQALAPIRSLNGDPTSAATTYREA 876

Query: 147  L--------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP------WVTE 192
            L                A      E  R  D N+A+     AL ++          W   
Sbjct: 877  LAHLTALGTTEDVPMLLAQVG--HELLRANDTNAARSELESALRLADRHGNREARIWSHC 934

Query: 193  AVVQQYVLAKEWSRAI---TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY--- 246
             +    V       A        +         R   ++    +      G  +A+    
Sbjct: 935  GLGDLAVATANLPEAEHHYRLAREAIAADSPTRRLIPVIESRTARLLHANGSPVAARSRL 994

Query: 247  HDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKVNPHPE 294
              AI +    D+    +  A   A+ +++      A  IL     +   P+
Sbjct: 995  QTAITAALAADDLPSLAYAANTLAEIVLADGDPATAAEILGLAETIRGAPD 1045


>gi|212690754|ref|ZP_03298882.1| hypothetical protein BACDOR_00241 [Bacteroides dorei DSM 17855]
 gi|237708139|ref|ZP_04538620.1| tetratricopeptide repeat family protein [Bacteroides sp. 9_1_42FAA]
 gi|265756795|ref|ZP_06090783.1| tetratricopeptide repeat family protein [Bacteroides sp. 3_1_33FAA]
 gi|212666631|gb|EEB27203.1| hypothetical protein BACDOR_00241 [Bacteroides dorei DSM 17855]
 gi|229457692|gb|EEO63413.1| tetratricopeptide repeat family protein [Bacteroides sp. 9_1_42FAA]
 gi|263233581|gb|EEZ19201.1| tetratricopeptide repeat family protein [Bacteroides sp. 3_1_33FAA]
          Length = 471

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 66/191 (34%), Gaps = 24/191 (12%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           SP + W  +      ++ ++ ++A    ++  K     N+  A LL+       D+G   
Sbjct: 22  SPGSEWSLQVKQAATMIKEDPAKASEAFDELLKGK---NKKNAFLLVEIGRAYLDQGKTA 78

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-----------ILEKIWKVNPH 292
            +   A  +  +     +A + +    ++ N   KA               E  +K    
Sbjct: 79  EAAEYAQRAKDINSKCAVAYLLSGDIALNLNDVNKASSDYNQAIYLDEDCSEAYFKY--- 135

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              A +Y  +  + ++  L R   L+    E       ++ +   MG   +A       +
Sbjct: 136 ---AQVYKGVDPQLSLDMLMR---LQSKTPEDNRISKELADVYYTMGQYGKAKEAYENYL 189

Query: 353 KI-APRKEIFL 362
           K+  P ++ + 
Sbjct: 190 KVGTPTEQDYT 200


>gi|152982866|ref|YP_001352556.1| hypothetical protein mma_0866 [Janthinobacterium sp. Marseille]
 gi|151282943|gb|ABR91353.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 384

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 50/173 (28%), Gaps = 24/173 (13%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV-QIALAERQYNIAHEKL 143
             AL   L+SI      +A    S            +  LL   Q A A      A   L
Sbjct: 14  RHALSRALVSIG----FVAGVYASSAMADELAD---VSQLLRAGQHAQA---LTKADAFL 63

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
               +    R      L  ++        A    TK  +  P  P     +   Y  + +
Sbjct: 64  SKNPRDAQMRFLKGVILTEQNKSAE----AITIFTKLTEDYPTLPEPYNNLAVLYASSGQ 119

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
           + +A T L+   +    +         A + EN        +     ++L+L 
Sbjct: 120 YDKARTALDMAIRTNPTY---------ATAYENLGDVHAKLASQAYDKALQLD 163


>gi|82703468|ref|YP_413034.1| hypothetical protein Nmul_A2351 [Nitrosospira multiformis ATCC
           25196]
 gi|82411533|gb|ABB75642.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 395

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 9/127 (7%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            Y  A    E  L+       A   L    C +     A +Y  KA+ ++P A  +   +
Sbjct: 64  DYAEAIAAYEKALEADPRHVEAHNGLGVAHCLLDRHELALQYFRKAIGMAPLAAHLHNNL 123

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              +++  + + A++   +         R R  L               A  HD   +L 
Sbjct: 124 GYAHLVHGQEAEAVSAFERALLLEPHNQRARRHLAAVYKK---------AGLHDKAAALT 174

Query: 255 LCDNSIM 261
           +  +   
Sbjct: 175 VAPSGAP 181


>gi|56420730|ref|YP_148048.1| hypothetical protein GK2195 [Geobacillus kaustophilus HTA426]
 gi|56380572|dbj|BAD76480.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 418

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 7/182 (3%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESC 165
                      +E +V     ++  +  +Y+ +    E + +         +     E+ 
Sbjct: 121 RKLRQAYEKAPDEPIVQFALAELYFSHGEYSKSVPLYEQVRKTNKEMAGVLITERIAEAL 180

Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G+  +A  Y  +AL+   D+   T        L    +        K    KE + +
Sbjct: 181 SRSGEFEAALPYYEEALNEKMDSR--TLFAYGFTALQ---AGYTQTAIDKLSALKELDPD 235

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              L +  +     +G ++ SY  A+E + + + +    + A K  +  NK  +AE  L+
Sbjct: 236 YTPLYLYLAKAYEQEGRLVQSYETALEGIGVDEWNKELRLYAGKLALKLNKPEEAEEHLK 295

Query: 285 KI 286
           K 
Sbjct: 296 KA 297


>gi|116208118|ref|XP_001229868.1| hypothetical protein CHGG_03352 [Chaetomium globosum CBS 148.51]
 gi|88183949|gb|EAQ91417.1| hypothetical protein CHGG_03352 [Chaetomium globosum CBS 148.51]
          Length = 796

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 76/256 (29%), Gaps = 20/256 (7%)

Query: 135 QYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            Y  A      +  +  TR      YS      R G   S    A +  D+  D+P    
Sbjct: 530 NYADAERIFRRLRTLAPTRHEDMEFYSTVLWQLRKGTELS--FLAHELTDMDWDSPQAWC 587

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            +   + L  +  +A+    +       +    +     +  E+ +  +   +      +
Sbjct: 588 VMGNAFSLDCDHEQALQCFKRAIHLQPNF----SYAYTLQGHEHVENEEYDKALVSYRRA 643

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
           +        A     K         KA         ++P    A+          + + K
Sbjct: 644 VAADKRHYNAYYGIGKVYEKLGNYDKALSHYHAALVIHP----AHAVLICCLGTVLQRQK 699

Query: 313 R-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL 364
           +        ++  E+   + E     +   L  G +++A  + M+   +AP   ++  LL
Sbjct: 700 QIVQALPYFIKAVELAPRAPEMRSKKAGALLATGQLEEAKRELMILRDVAPNNAQVHFLL 759

Query: 365 AQIEQANSHNTDKILY 380
           A++ +           
Sbjct: 760 AKLAKTVGDKRTAASG 775


>gi|117926636|ref|YP_867253.1| hypothetical protein Mmc1_3361 [Magnetococcus sp. MC-1]
 gi|117610392|gb|ABK45847.1| TPR repeat-containing protein [Magnetococcus sp. MC-1]
          Length = 750

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 80/279 (28%), Gaps = 23/279 (8%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTF-HNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           AL   +          A+ +     Q      + Y ++ L  Q A        A     M
Sbjct: 12  ALSQAM-----QQGRFAQALQQANRQLKKPGPHPYALWQLAAQAAEKLHDIPQAERLWRM 66

Query: 146 MLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            +  P  +      +  L  E+ R+ + ++A      AL  +P        + +    A 
Sbjct: 67  AITAPDQQGQALVGLGELLEEAQRLPEAHTA---FRTALGFNPHLGSAHHGLGRLLEGAG 123

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           E   A+    Q        N  R              G+   +     E L    +  +A
Sbjct: 124 ELQAALQCYQQAVTLEGGLNSAR----FRLGRLWQRLGEPQQAKQAFAEILSQHPHFYLA 179

Query: 263 SICAAKSLISQNKKRKAEV-----ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
            +  A+      + ++AE      I ++      H ++AN+YT          +      
Sbjct: 180 RLHLAECQQRLGEAQQAEQNYLLVIQQQASLPEAHNQLANLYTDQRH--FAQAIHHYQAA 237

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            E+          +  + L       A      A ++ P
Sbjct: 238 IELRPSVAMFHYNLGYVYLLQNDHATAAQHYSNAYRLDP 276


>gi|325926663|ref|ZP_08187977.1| Tfp pilus assembly protein PilF [Xanthomonas perforans 91-118]
 gi|325543015|gb|EGD14464.1| Tfp pilus assembly protein PilF [Xanthomonas perforans 91-118]
          Length = 1509

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 76/252 (30%), Gaps = 55/252 (21%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           ++ L     + A  ++  AR++     Q     NE   ++    +  A      A     
Sbjct: 357 WQQLQQAEAARARGDLAQARQLVEQAVQ--LLPNEPAGHVALGDV-QAAGDPVAAEASYR 413

Query: 145 MMLQIP---ATREFAVYSLY---------------------------------------F 162
             L      A     +  LY                                        
Sbjct: 414 KALSREADNAGALQGLVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARAR 473

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEW 221
           +    GD  SAQ     A+   P   W+   + + Y  A    +A + ++     +  + 
Sbjct: 474 QFLDGGDAVSAQTELEAAMVERPGDAWIRLDLARLYQQAGRPDQARSVMDGLLAVHGDQP 533

Query: 222 NRNRAILLIAR-------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
               A  L+A+       + ++ D+    A+   A+  L+     I      A+ L++Q 
Sbjct: 534 EALHANALLAQESGDWQGAYDSLDRI-PSAARTPAMAQLR-ATAWIELQARQARQLVAQG 591

Query: 275 KKRKAEVILEKI 286
           +  +A+ +L + 
Sbjct: 592 RVGEAQQLLART 603


>gi|304383427|ref|ZP_07365892.1| tetratricopeptide repeat family protein [Prevotella marshii DSM
           16973]
 gi|304335441|gb|EFM01706.1| tetratricopeptide repeat family protein [Prevotella marshii DSM
           16973]
          Length = 470

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANS 372
                + NK++ E+LV + +  L +     +   A  A+K        ++LL  IE    
Sbjct: 50  VKEFYKANKKNAEALVGLGRAYLNVQDTTYSSKYANEAIKRDKNYAPGYILLGDIEVVKD 109

Query: 373 HNTDKILYWTQSALH-AMPDP 392
           +       W   A++ A  DP
Sbjct: 110 NGGAAA-GWYLQAINFAPQDP 129


>gi|299529679|ref|ZP_07043116.1| hypothetical protein CTS44_02865 [Comamonas testosteroni S44]
 gi|298722542|gb|EFI63462.1| hypothetical protein CTS44_02865 [Comamonas testosteroni S44]
          Length = 916

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 58/164 (35%), Gaps = 23/164 (14%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAK 219
            ++   GD+  A RYA  ++ I+PDA       +   +   + ++A     Q    ++  
Sbjct: 274 LQAREQGDMVKALRYAETSVRIAPDALAPRLQWLGLLLQDGQAAQAQRVAEQGLALQHDP 333

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRK 278
                + + L  +    + +     ++  A+ +  L         + A  + ++  +  +
Sbjct: 334 ALQVLQGVALHVQGRGMSSE----QAFDAALAAPHLSRSERQNYGVIALDAALAAGQTER 389

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322
           A+ +++                 L +++      R  +L+ +  
Sbjct: 390 AQRLVQA----------------LETDSNADISSRREQLKTLRS 417



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 36/97 (37%), Gaps = 5/97 (5%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ E   +GD   +  +  ++ +L  ++   ++  A +     +  +AE +L+   ++  
Sbjct: 45  KAYEAMARGDGQRAISELQQAQRLAPDNTEIALQLAAAHRRFGQPAQAEAVLKA--QLQR 102

Query: 292 HP---EIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           HP    +A     +       +   +  L     +  
Sbjct: 103 HPGDARLAQALRDMHQGAVPARQPASQALPAPAAKEP 139


>gi|260886344|ref|ZP_05897607.1| putative TPR repeat-containing domain protein [Selenomonas
           sputigena ATCC 35185]
 gi|260863865|gb|EEX78365.1| putative TPR repeat-containing domain protein [Selenomonas
           sputigena ATCC 35185]
          Length = 508

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 59/207 (28%), Gaps = 23/207 (11%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
              KR+ D  Y+      ++I     P A      V +    + E     L  Q      
Sbjct: 137 SYQKRDLDAAYREFSRA-IAIN-GENPTAFVNRGIVLRDMKRYEEAQKDFLTAQSF---- 190

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A  + EM L                +    D  +A  +  +A+ + P+        
Sbjct: 191 DSQNALIEFEMGLT---------------ALAQNDSGTAFAHMDRAVALQPNDMGAQMYR 235

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                    +  AI       + A +  + RA +    + E   K D  ++  D   +L 
Sbjct: 236 ASLLYRLGRFDDAIDGYTHVLEKADDALKLRAYIERGLAKEQ--KQDFASAVDDYTAALT 293

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEV 281
           L   +  A       L    K  +A  
Sbjct: 294 LEKENAPALSRRGVCLERLGKHEEAIA 320


>gi|218265066|ref|ZP_03478667.1| hypothetical protein PRABACTJOHN_04377 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221618|gb|EEC94268.1| hypothetical protein PRABACTJOHN_04377 [Parabacteroides johnsonii
           DSM 18315]
          Length = 321

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E   + A  L+ ++       D + +  D   ++ L ++   A +  A+ L+S  +  +A
Sbjct: 126 EETNHLAWFLMGKAKRT--TSDPLGAIADLTRAIALKEDFTDAYLMRARILLSMQQATEA 183

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIA 335
              +EK   + P  E + +         +G +  A      + E+N  + E++++V ++ 
Sbjct: 184 LPDVEKAITLAPEEETSYL-LRGRIHEAMGNIDAATADYQNVLELNPFNDEAMLLVGQLL 242

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
           +  G +D+A      A+ + P 
Sbjct: 243 ITQGRLDEAITFFDEAIDLKPD 264



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 14/161 (8%)

Query: 100 IPLARKMHSYVSQQHTFHN---EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
             +A    +   ++           + L   Q   A      A      +     T    
Sbjct: 148 GAIADLTRAIALKEDFTDAYLMRARILLSMQQATEALPDVEKAIT----LAPEEETSYL- 202

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +     E+   G++++A       L+++P        V Q  +       AITF ++   
Sbjct: 203 LRGRIHEAM--GNIDAATADYQNVLELNPFNDEAMLLVGQLLITQGRLDEAITFFDEAID 260

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
              ++ +  A     R      KGD   ++ D  +S++L  
Sbjct: 261 LKPDFGKAYA----ERGRAKNLKGDKEGAFEDLKKSIELNP 297


>gi|170724847|ref|YP_001758873.1| HemY domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169810194|gb|ACA84778.1| HemY domain protein [Shewanella woodyi ATCC 51908]
          Length = 389

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 61/213 (28%), Gaps = 36/213 (16%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M+R++ Y  +I + +C           + + + +          +  L  F     ++  
Sbjct: 1   MIRVLAYLAIILIGLCISPFFDGMNGYLYVAFWDYEVEMGVVTAIVGLILFYCILQVVEW 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
              F L+   +   +L ++   K                   A + H+ V          
Sbjct: 61  CLVFLLNL-ILSSRLLPEKWRRK-------------------AARKHTLVGAL------- 93

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                    ALAE  + +A + +    +        + +    +    D  S   Y  +A
Sbjct: 94  ---------ALAEEDWPVAEKAMAKGAEKGELPALNLLAAARAAQHQNDSTSRDNYLNEA 144

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
                    VT    +  +   +   A   L++
Sbjct: 145 EKEPIAVNAVTTTRTRYLLQQGDLISAREQLDK 177


>gi|302810183|ref|XP_002986783.1| hypothetical protein SELMODRAFT_446745 [Selaginella moellendorffii]
 gi|300145437|gb|EFJ12113.1| hypothetical protein SELMODRAFT_446745 [Selaginella moellendorffii]
          Length = 461

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 6/142 (4%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           ++ ++ L   ++    A      E+LK   + + A   AA S     +  KA+  LEK+ 
Sbjct: 109 VVASKRLRPQEEEKFKAELQKFEEALKNSPDDLSALEGAAVSYAELGEYAKAQTNLEKLI 168

Query: 288 KVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +++P        +A + + L          R   ++     S+E L+ +++  ++     
Sbjct: 169 RMSPSNVEALRLLAEVKSSLNDFEGSSNAYR-QAIKASGSTSMELLLGLTEALIDANKPG 227

Query: 343 QAHAKAMLAMKIAPRKEIFLLL 364
           +A  + + A +         LL
Sbjct: 228 EAVDELLRAKETTKTAPGVQLL 249


>gi|194768777|ref|XP_001966488.1| GF22206 [Drosophila ananassae]
 gi|190617252|gb|EDV32776.1| GF22206 [Drosophila ananassae]
          Length = 688

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 80/252 (31%), Gaps = 26/252 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176
            +    +++++ A    +  L       T++    +      + GD         S ++Y
Sbjct: 254 ARFEEGQKEHDRARIIYKYALDHLPKERTQDL-FKAYTIHEKKYGDRAGIEDVIVSKRKY 312

Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230
              + +  +P         ++      +  +      +   N    N     R    L I
Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEAEGDVDQIRETYERAISNVPPANEKNFWRRYIYLWI 372

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L+L            +  A+  I   + ++A   +  
Sbjct: 373 NYALYEELEAEDPERTRQIYKTCLELIPHKQFTFSKVWLLYAQFEIRCKELQRARKAMGL 432

Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              + P  ++   Y  L     E    +L    +  E   E+  + +  +++   +G  +
Sbjct: 433 AIGMCPRDKLFRGYIDLEIQLREFERCRL-LYEKFLEFGPENCVTWMKFAELENLLGDTE 491

Query: 343 QAHAKAMLAMKI 354
           +A A   LA++ 
Sbjct: 492 RARAIFELAVQQ 503


>gi|167617842|ref|ZP_02386473.1| TPR domain protein [Burkholderia thailandensis Bt4]
          Length = 396

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 13/160 (8%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +  ++ +   R   I L A+S           +   A    +   +S  A+   A  
Sbjct: 102 ALARDTRDPRMAQRATEIALAAQS--------PADALTAANLWREYSPDSQRAAQVDAAL 153

Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
           L+   K  +A+ +L +              IA         N VG L     L + +   
Sbjct: 154 LVLGGKPAEAQPMLAQELARATGDNRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMNR 213

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            E+ + +++  L     D A      A++I P      L+
Sbjct: 214 PEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALM 253


>gi|163858323|ref|YP_001632621.1| hypothetical protein Bpet4005 [Bordetella petrii DSM 12804]
 gi|163262051|emb|CAP44353.1| conserved hypothetical protein [Bordetella petrii]
          Length = 607

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 91/303 (30%), Gaps = 43/303 (14%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   A      +S++     + L   ++ Q+A    + + A   LE  L +   R    
Sbjct: 287 GDYDSALAELQAMSRRSPEDFDLL--FMQAQLAYKAGRKDQARVLLEQYLDVQNQR---- 340

Query: 158 YSLYFESCRIGDLNSAQRYAT----------------KALDI-----SPDAPWVTEAV-V 195
                E+   G  ++    A                 +A+        P   +  +    
Sbjct: 341 ----QEAITPGASDAGAAEADARVLLSRIAEDQGRYDEAIAQLGQVDDPSLRYSAQMRQA 396

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                      A++ +   + + ++      +       E     D +A+   A ++   
Sbjct: 397 GLRAKQGRIDEALSMIEAAQPHDEDDQVQGVLTKAQILREAGRVDDAVATLEAANQAQ-- 454

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSENTVG 309
             +++      A     Q +  + E  L ++  ++  P+ A+ Y  L       ++    
Sbjct: 455 -PDTVEIKYELAMLYERQGRYDELETQLRQVIALD--PDHAHAYNALGYTLADRNQRLPE 511

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
            L    +  E+  +    L  +  +   MG    A      A    P  +I   LA++  
Sbjct: 512 ALDLITQALELQPDDPFILDSMGWVKFRMGDKPAALDYLSRAYAQRPEADIAAHLAEVLW 571

Query: 370 ANS 372
           A  
Sbjct: 572 AEG 574


>gi|121710870|ref|XP_001273051.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus clavatus NRRL 1]
 gi|119401201|gb|EAW11625.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus clavatus NRRL 1]
          Length = 630

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 3/164 (1%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+     ++  A +  +  + +  T  F+   L     ++G + SA     +++    
Sbjct: 417 RAQLHFILGEFAEAAKDYQKSIDLDRTFIFSHIQLGVTQYKMGSVASAMATFRRSVKNFE 476

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENAD-KGDM 242
           D P V     +  +  + +S AI   ++  +  K+        + LI ++L     K D 
Sbjct: 477 DVPDVYNYYGELLLDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDF 536

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             + +   ++L +     +A    A+ L+ Q K  +A    E+ 
Sbjct: 537 QEAENLCQKALIIDPECDIAVGTMAQLLLQQGKVSQALKYFERA 580


>gi|77919468|ref|YP_357283.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77545551|gb|ABA89113.1| TPR repeat protein [Pelobacter carbinolicus DSM 2380]
          Length = 594

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 13/127 (10%)

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--------LLSENTVGKLKRALRL 317
            A+ L   N+  +A   LE+    +PH    + Y             E  + +      L
Sbjct: 78  RARLLALDNRLPEAVAALERAIDADPH----SAYLRMVMAEIQLARGEEKLARRAVEDAL 133

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            + + + +E+ +++  + L   S   A      A+ + P  E   L   +       TD 
Sbjct: 134 IQ-DPDYIEAHLLLGNLLLNSQSYQGAIEHLTRAIDLDPTLEKVYLQLAVAYVRGGATDD 192

Query: 378 ILYWTQS 384
            +   + 
Sbjct: 193 AIGILKR 199


>gi|88704039|ref|ZP_01101754.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
 gi|88701866|gb|EAQ98970.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
          Length = 596

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 94/295 (31%), Gaps = 22/295 (7%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
              +     +     L +Q A     +    A E+ E++          ++SL   S  +
Sbjct: 259 ARMEEALDVDPTRTELRLQYARLLASQDMAAAREQFEILSAEAPHNADLLFSLALISHEL 318

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            D  +A+ Y  + + ++         + Q      +   AI      ++        +A 
Sbjct: 319 EDNEAAKGYLQQIIALNQRRDEAYLFLGQIARSEDDLDEAIQLF---QQVGDGAELMKAT 375

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVIL 283
           + IA+      +   +A Y D     +L  +            A      +   K   +L
Sbjct: 376 ISIAQIQVAEGREQELADYMD-----RLRQSYPPRKEQLYALEANIYSETDHDEKGLELL 430

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALR----LEEINKESVESLVIVS-KIALEM 338
            +     P  +    Y   ++    G +  A      + E + ++  +L  +   +A   
Sbjct: 431 NRAIDEFPESDNLR-YARSVAHEKAGNIAAAETDLRDIIERDPDNATALNALGYTLANST 489

Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
              D+A      A+ ++P +  I   +  +   +  + +    +   A  A PDP
Sbjct: 490 DRYDEARVLIEKALALSPNEPSILDSMGWVLY-HHGDLENAKEYLTRAYAAFPDP 543



 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 67/191 (35%), Gaps = 10/191 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           + +  +  +++  A+    ++    ++   +     +A+ L+   +         A+E  
Sbjct: 75  LAEFALRRRDFDTALNTYLEQADVLQDPAVSAHATHLAQYLQREREAFRAVRLWVALE-- 132

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEK---IWKVNPHPEIANIYTHLLSENTVGK 310
               ++I A+   A  L  Q + R+A   L       +    P + N Y  L   + +G 
Sbjct: 133 ---PDNIEANGTLATLLARQGRNREALPYLATVARAGEKAKFPVLLNRYKALRPADQLGL 189

Query: 311 LKRALRLEEINKESVES-LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIE 368
                 L + +     S  +  + +A E G      A+      + P +   L+L A++ 
Sbjct: 190 DSDTQALLDDDLGDDVSLRLTHALMAEERGDAATTRARLAPVFALKPYQRQALILEAKLN 249

Query: 369 QANSHNTDKIL 379
            A   +     
Sbjct: 250 LAEGIDEPLAR 260


>gi|302341944|ref|YP_003806473.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfarculus baarsii DSM 2075]
 gi|301638557|gb|ADK83879.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfarculus baarsii DSM 2075]
          Length = 842

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 82/277 (29%), Gaps = 17/277 (6%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           G      GL++ AA     A              NE  V          + +   A E  
Sbjct: 566 GDMLFDQGLIAQAAAEYEKA---------LLLDPNEPNVLNSLGVCHGQQGRPQQAMEYF 616

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +  +        A +++      +  L  A+R   +AL++SP        + +   +   
Sbjct: 617 QKAMDAQPDNFMAHFNMGCALMALDHLEQARRGLERALELSPGHADSLFQLGRLAQMQGR 676

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A   L +  K      R      +  +L    + D   +      ++KL      A 
Sbjct: 677 VLEAAELLQRAAKAPDC--RRAVHRHLGEALAALGRADQAEACLK--TAVKLLPRDAAAL 732

Query: 264 ICAAKSLISQNKKRK-AEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGKLKRALRLEE 319
              A   + +   R+ A  +  +  ++ P  P    +      +               E
Sbjct: 733 AGLAGLYLDRGANREIALSLASRAARLEPDQPRHQALLARAQQDLGRLEEAAATLRAAVE 792

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              E     + + ++    G  D A  + + A+++ P
Sbjct: 793 AWPEDPYLPLSLGRVLAAQGQADAARRQILRALELEP 829


>gi|118591850|ref|ZP_01549245.1| TPR repeat [Stappia aggregata IAM 12614]
 gi|118435493|gb|EAV42139.1| TPR repeat [Stappia aggregata IAM 12614]
          Length = 457

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L A +L +  +    A+   A   L+LC + + A +  A+    + +   A   L +   
Sbjct: 13  LYALALRSFGREQCAAAIAYADACLELCPDHLDAWLLQAEVHSLEERPTAALACLTRAVA 72

Query: 289 VNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             P      H  IA+   +L    +   L+ A +L+    +  E   +++      G  D
Sbjct: 73  TQPASATALHRLIAH---YLRLGRSGDALRVAEQLKNRQPDDPEIDYVLAVARSRRGQRD 129

Query: 343 QAHAKAMLAMKIAP 356
           +A A     +   P
Sbjct: 130 EALATFRELLCHNP 143


>gi|62739321|gb|AAH94088.1| LOC431836 protein [Xenopus laevis]
          Length = 511

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 57/179 (31%), Gaps = 19/179 (10%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A + + A+T  +    +    N    +    R+      G   ++  D   +++L  + 
Sbjct: 65  AAGQLAEALTHYHAAV-DGDPNNY---LTYYKRAAVYLAMGKFRSALPDLSRAIQLKPDF 120

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---------NTVGK 310
           + A +     L+ Q   ++A      + + +P  E A      + E             +
Sbjct: 121 LAARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQLERVQEVERNVGGASEAYER 180

Query: 311 ------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 +    ++ E +     +  + ++  L++G +  A        K+        L
Sbjct: 181 RDYYGAIALLEKVIEFSPWDPSARELRAECYLQVGELSNAVQDLKPTTKLRNDNRAAFL 239


>gi|332876319|ref|ZP_08444092.1| tetratricopeptide repeat protein [Acinetobacter baumannii 6014059]
 gi|322507008|gb|ADX02462.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
 gi|323516876|gb|ADX91257.1| hypothetical protein ABTW07_0821 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332735470|gb|EGJ66524.1| tetratricopeptide repeat protein [Acinetobacter baumannii 6014059]
          Length = 545

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 20  DQALQQSMVAEFALAYDDIPTALHNYTVLAIKSNSTTIKQRALDV-ALEYNDLQAALNIA 78

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 79  THWVVQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 138

Query: 225 RAILLIARSLENADKGDMIASYHDAIES---------------LKLCDNSIMASICAAKS 269
           R +LL A           I +    +E+               L+         +  A  
Sbjct: 139 REVLLTALRSSAEKDNPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANL 198

Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K    +K N    +A +   +        L++  ++ + N  + E
Sbjct: 199 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIQSNPHAEE 258

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 259 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 312



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 365 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 422

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 423 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 464


>gi|288960093|ref|YP_003450433.1| hypothetical protein AZL_a03580 [Azospirillum sp. B510]
 gi|288912401|dbj|BAI73889.1| hypothetical protein AZL_a03580 [Azospirillum sp. B510]
          Length = 471

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 20/195 (10%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +    +  L   +          HN      L  Q  L   +   A       ++   ++
Sbjct: 243 AAWRGDGALTNALADEAKSYAASHNCAWELGLVAQTLLRAGKEAQARTLFLNTVETQFSK 302

Query: 154 EFAVYS------LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                       L   +  IG+   A    +   D +P   W   AV+ +     E   A
Sbjct: 303 FKETRGDCCPPELAVAAADIGEPKLALGLLSTVQDENP---WTIPAVLGRLAKRGESGMA 359

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I    ++  +        A L+ A       +G+   ++       KL D+       A 
Sbjct: 360 I-VYAEQVTDIDTRGEAYADLIEA----TMKRGEPAVAHDLMNRLNKLVDD------AAG 408

Query: 268 KSLISQNKKRKAEVI 282
           +      ++ KAE +
Sbjct: 409 RRPGLLAQRAKAEKV 423


>gi|87311428|ref|ZP_01093548.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM
           3645]
 gi|87285840|gb|EAQ77754.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM
           3645]
          Length = 984

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 14/207 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE 220
           +    D + A++   KA   +P      EA +        + +   A T      K    
Sbjct: 150 ALADQDYDMAEQLFRKAKAAAPSLAMQGEAELGLARTLRDSGQLHAARTAYRAALKQELT 209

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
              +    L        +    +    +  ++     +   A +  AK+        +AE
Sbjct: 210 EAHDAKFELGVLEYRLGEHRVAVEHLTEVAQAGDRHSDI--AKLWIAKAYYEVRDWPQAE 267

Query: 281 VIL------EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV---ESLVIV 331
             L      EK+ +     +  +    L    T   L +  +L   +  S    E+L  +
Sbjct: 268 QRLQELAQEEKLSQYRDEIDYLSARIRLEQGETSEGLTQLEQLLANHPASPWCDEALFYL 327

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358
           ++ A+  G +D+A   A   +   P++
Sbjct: 328 AEAAVVTGDLDKATTTAKRLIVEYPQR 354


>gi|325109130|ref|YP_004270198.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324969398|gb|ADY60176.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 855

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 81/259 (31%), Gaps = 54/259 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +  L         +Q     + L Y +  +    ++++  A+E  +  L++ A+     
Sbjct: 83  GDDELESLGEETPDEQAENSRKALAYYMAGRSYERDKKFREAYEAYQQALKLDASSLSVY 142

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            S+   + R+     A + A KA+++ P+         +                     
Sbjct: 143 RSMIPLAFRLDKTEEAIQLAQKAVELDPNN-------FELLSQLG--------------- 180

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-ASICA--AKSLISQN 274
                          +L   D    I  +  A++S  +   S    SI +   +  +S  
Sbjct: 181 -------------IYALRQQDLQGSIDYFQKAVDSQTVDKQSGPYISIMSQLGQLYLSLG 227

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVES----L 328
              KA  + E +++   +P          ++  +    R     L     E+ ES     
Sbjct: 228 DNNKAAEVYETVYQALANP----------TDYNIDFRTRQALENLRGSKAETFESFGELF 277

Query: 329 VIVSKIALEMGSIDQAHAK 347
           +   ++ L  G+  +A   
Sbjct: 278 LTTDRLDLAEGAFREARKA 296


>gi|300920711|ref|ZP_07137117.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
 gi|300412282|gb|EFJ95592.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
          Length = 1093

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R G  ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLQVLSGRQDNARLQREKLLRD 632


>gi|171058438|ref|YP_001790787.1| TPR repeat-containing protein [Leptothrix cholodnii SP-6]
 gi|170775883|gb|ACB34022.1| Tetratricopeptide TPR_2 repeat protein [Leptothrix cholodnii SP-6]
          Length = 647

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 58/170 (34%), Gaps = 4/170 (2%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L++      + Q + A    E+ L        A+YSL     +  +   A+    +A+
Sbjct: 28  ALLIQGIELQNQGQLDPAQRIFELYLDHHPADPAALYSLAVILLKRPESGKARALLDRAV 87

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    +  A       A E   A+  L++      ++      +LI   +   +   
Sbjct: 88  QLAPHFAPLWFAHGTALQGAGEREAALQSLDRALAIQPDYTE----VLINSGVLLRELLR 143

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
              +       L++      A    A  L    +  +A  + E++  +NP
Sbjct: 144 HAEALQRFQRVLEIKPQHETALANCAVLLTDFKRSEEATAMFERLLAINP 193


>gi|149917672|ref|ZP_01906168.1| Tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149821454|gb|EDM80854.1| Tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 770

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 13/155 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G +  A   A +   + PD P+      +       W +AI  L +  +   E   
Sbjct: 614 AARQGRVEEALTLADQVEALMPDHPYPDLLRGRALAKVWRWEQAIEPLERAFERNPESPG 673

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDN---SIMASICAAKSLISQNKKRKAE 280
               L    +           +   A   L L       + +   A  +L  ++  R   
Sbjct: 674 ----LASELATALGSANRPARALAVAQAGLALRPRDEALLRSQALALAALHGEDDPRAKA 729

Query: 281 VILEKIWKVNPHPE----IANIYTHLLSENTVGKL 311
            +    +  +  P+    +A     L     + ++
Sbjct: 730 AL--DAYFAHRRPDDEPHLAADCGRLDPACALERV 762


>gi|95929453|ref|ZP_01312196.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134569|gb|EAT16225.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 251

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 7/146 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
               ++++  ++L + PD P V   +   Y+  + W  A     +   N     R R+  
Sbjct: 78  AYELSEQHFKESLLLDPDNPNVENNLAALYLDMQRWDDAAHLFRKVSDNLLFPFRVRS-- 135

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L    L     G+ I +     E+L+    S       A++ +   K   A   L+K+ K
Sbjct: 136 LTGLGLAYQRGGNYIKAILAFNEALESAPGSTGIMALQAQTYMRMAKYDLARTQLKKVLK 195

Query: 289 VNPHPE-----IANIYTHLLSENTVG 309
           + P        +   Y +L       
Sbjct: 196 LAPEFSAARLMLGECYLYLEDNEAAA 221


>gi|46201738|ref|ZP_00054480.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 495

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 11/269 (4%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L + + S         ++  +      +  A  +   +  +   +      R    + 
Sbjct: 50  GRLPQSLDSLGKAARLAPDDSRIGRNYALVLQAAGRLPESEREFVRLSDREPDRPEHRFG 109

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L       G  + A  +  + L ++P        +      A     AI    +  + A 
Sbjct: 110 LGLVVSAQGRFDHAIAHFREGLALAPGDAEARCNLGLACRAAGRLEEAIDAFAKAAEMAP 169

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              +    L           G  + +      +L L             +L    +  +A
Sbjct: 170 GLAKAHGNL----GGALFAAGRWVDAVDAWARALALEPRHADVRSDMGVALAKLGRLDEA 225

Query: 280 EVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKI 334
                +  +++P +P   + Y    + + +G+L+ A     ++  ++   + + +    I
Sbjct: 226 VDCFRQASEIDPGNP--GHGYNLGRALHDLGRLEEALQSYAQVIALDPCHLSAHLNSGVI 283

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
             + G  DQA A     +++ P      L
Sbjct: 284 FKKAGDYDQALAAYDRVLELDPANGAASL 312


>gi|302754462|ref|XP_002960655.1| hypothetical protein SELMODRAFT_70595 [Selaginella moellendorffii]
 gi|300171594|gb|EFJ38194.1| hypothetical protein SELMODRAFT_70595 [Selaginella moellendorffii]
          Length = 318

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 21/95 (22%), Gaps = 15/95 (15%)

Query: 129 IALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
                   + A +    M               Y L        D  SA +   +     
Sbjct: 220 AYAQAGDMDHASKLFREMPTRDVLSCNAMLTG-YGLCC------DAKSALQIFERM---- 268

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           P       A++        W  A+      + + +
Sbjct: 269 PQRGTSWNAMIASCASNGHWIEALELFLAMQLDGR 303


>gi|170722106|ref|YP_001749794.1| bacteriophage N4 receptor, outer membrane subunit [Pseudomonas
           putida W619]
 gi|169760109|gb|ACA73425.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 1000

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 38/139 (27%), Gaps = 15/139 (10%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L       A      A      +         R  A       +   GD  +A+RY   
Sbjct: 494 RLPLAYALEAAGDSTAALPIWRSLPDSAWNDNARLTAAAG----ALNAGDPQAARRYWD- 548

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A   +    W   A + Q     +   A+ F  Q   +    +        A +      
Sbjct: 549 AAAHTRADDWALGAAIAQR--QGDLQAALGFQRQALAHTPRADH-----YYAAAGTAQQA 601

Query: 240 GDMIASYHDAIESLKLCDN 258
           GD   S     E+++L  N
Sbjct: 602 GDSAQSTAWLAEAVRLAPN 620


>gi|86741120|ref|YP_481520.1| serine/threonine protein kinase [Frankia sp. CcI3]
 gi|86567982|gb|ABD11791.1| serine/threonine protein kinase [Frankia sp. CcI3]
          Length = 785

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 2/86 (2%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+++A  +   AR   ++         E    L   + A A      A +  +++ + 
Sbjct: 573 RGLLALADGDTAAAR--GAFDRVYDEVPGELAPKLALARTAEATGDLPRAQQLYDLVSRT 630

Query: 150 PATREFAVYSLYFESCRIGDLNSAQR 175
                 A + L       G+ + A  
Sbjct: 631 DDAFTGAAFGLARVRIAAGNRDGAVA 656


>gi|327537564|gb|EGF24281.1| O-linked GlcNAc transferase [Rhodopirellula baltica WH47]
          Length = 486

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 4/155 (2%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
              E    LL    A    +   A +    +L     R    + +     RIG+  +A+ 
Sbjct: 326 LPEEEDDLLLSAYQAEDSGELETAIDCYHAVLARDGARSDIHFQIGELLYRIGETIAARE 385

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
               AL++ PD      ++        +   A+           ++      +    +  
Sbjct: 386 RYYAALEVDPDFVEARSSLAGVLAETGQPELAVAAYRGALALHDDYPD----VHYNLARI 441

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             D    + + H     L+L   S  A    A+  
Sbjct: 442 LEDLHRSVEAEHHWRRFLQLSPGSPWADEAHARLE 476


>gi|323699494|ref|ZP_08111406.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           sp. ND132]
 gi|323459426|gb|EGB15291.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 319

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 73/214 (34%), Gaps = 8/214 (3%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D ++A  Y  +AL++ PD                    A+  +++  +   +        
Sbjct: 75  DEDAALGYLDQALELDPDLAMARYYRASILFSQGRADEALADVDRAIELKPD----HVQA 130

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R     ++G    +  D  E +K   +   A +      +  N+  +A         
Sbjct: 131 HYMRGSILLNQGRYREAARDFTEVVKGDPSIAEAFVRRGLCYLRLNRDDEAIDDFGSALA 190

Query: 289 VNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           ++P  + A      T+L   +    L+   +   ++ ++V  L    +  L++    +A 
Sbjct: 191 IDPADQDASYNRGMTYLARHDYEAALRDLSQAYVLDSDNVRLLTARGQALLKLKRYGRAA 250

Query: 346 AKAMLAMKIAPRKEI-FLLLAQIEQANSHNTDKI 378
           A    A ++ P +   + LL +    +    + +
Sbjct: 251 ADYRRATELEPGQSALYGLLGEALAGDGRMREAV 284


>gi|297471702|ref|XP_002685395.1| PREDICTED: rolling pebbles-like [Bos taurus]
 gi|296490608|gb|DAA32721.1| rolling pebbles-like [Bos taurus]
          Length = 1850

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 131  LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             A ++Y  A  K       E M      R     +L     +  D   A+ +A+KAL++ 
Sbjct: 1309 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1368

Query: 185  PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            P +     A  +    ++++  A+  L +  K        R +L 
Sbjct: 1369 PKSYEAFYARARAKRSSRQFVAALADLREAVKLCPANQEIRRLLA 1413


>gi|296531693|ref|ZP_06894529.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296267978|gb|EFH13769.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 356

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 21/174 (12%)

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            + N      N A LL+ ++     +    A+       L+L  N   A   AA+   S 
Sbjct: 4   AQPNGASAGDNAATLLLDQASYWQAQNRPDAALQSLERLLRLRPNDPQALSMAAQIAASA 63

Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLL---------------SENTVGKLKRALRL 317
            +  +A+  L ++  + P  P++A   + L                S++  G+       
Sbjct: 64  GETEQAQAYLSRLSAIAPRSPDLARAQSALRATAADQQGLAEARQLSQSGRGREALLRYR 123

Query: 318 EEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQ 366
                    ++      +++  L      +A      A++  P    + L LAQ
Sbjct: 124 AAFGGNEVPDAFAVEYYLTQAGLSADDFREARRGLEAALQRQPDNARMKLALAQ 177


>gi|238025442|ref|YP_002909674.1| cellulose synthase operon C-like protein [Burkholderia glumae BGR1]
 gi|237880107|gb|ACR32439.1| Cellulose synthase operon C-like protein [Burkholderia glumae BGR1]
          Length = 1609

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 6/124 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +    DL +A+   T  L  +P+       +    +  + +  A   L +  +       
Sbjct: 305 ALDRNDLATARARFTAVLSSAPNDSDALGGLGIVELKQEHFREARDALERASRTGDPTRW 364

Query: 224 NRAI------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             A+         + +L     GD   +      ++ L  + +   +   + L+  +  R
Sbjct: 365 REALKSATYWTYTSEALGAQSNGDPAKAKSLFERAIALDPSEVSGELMLGELLLGNHDPR 424

Query: 278 KAEV 281
            AE 
Sbjct: 425 GAEQ 428


>gi|223986377|ref|ZP_03636384.1| hypothetical protein HOLDEFILI_03695 [Holdemania filiformis DSM
           12042]
 gi|223961668|gb|EEF66173.1| hypothetical protein HOLDEFILI_03695 [Holdemania filiformis DSM
           12042]
          Length = 905

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 4/117 (3%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A  Y  K++ I+    W    + + Y +  +   A+    +     KE  R+ A + 
Sbjct: 220 PEQALPYLEKSVAINDQDIWSQCELARCYAMQGKPEEALPHFLKA----KELGRDDAWIE 275

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +     N D      +      +L++  ++I A    A  L  +   ++A  +LEK 
Sbjct: 276 VQIGYVNEDMNKPEDAIPQFELALQIDPDNISALSHLAYQLSQKGDSKQALPLLEKA 332


>gi|212704446|ref|ZP_03312574.1| hypothetical protein DESPIG_02502 [Desulfovibrio piger ATCC 29098]
 gi|212672167|gb|EEB32650.1| hypothetical protein DESPIG_02502 [Desulfovibrio piger ATCC 29098]
          Length = 208

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 55/199 (27%), Gaps = 43/199 (21%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   S R  D   A+     A+  SP        +    +   +       L    +  
Sbjct: 33  GLALLSKR--DFVGAEEALLNAVRNSPHLAEAYVQLGGICLERGD-------LEGCLRYN 83

Query: 219 KEWNRNRA---ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +E  + RA   +     +  +  +G+   +     ++LK   + + A      +   Q  
Sbjct: 84  EEAAQCRAKFPVPWSNIAFVHLQRGEPDKAITALKKALKWDPDFVQAKNALTTAYYMQGD 143

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
               E + ++I    P       +    +                          ++   
Sbjct: 144 FEACEKLCKEILDKEP------AFAPAWNN-------------------------MALAQ 172

Query: 336 LEMGSIDQAHAKAMLAMKI 354
            ++G   +A   A  A ++
Sbjct: 173 FDLGKYAEARQSASKAAEL 191


>gi|116623758|ref|YP_825914.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226920|gb|ABJ85629.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 762

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 53/178 (29%), Gaps = 10/178 (5%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           + N   AR          +        L       A      + E L  ML  P +    
Sbjct: 592 SGNAAAARATLQRAQAIDSSEPREKGAL--AAELFANGMAVESRETLRRMLG-PQSSAGE 648

Query: 157 VYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           + +L +      GD   AQ+   +AL   P      + +   YV       AI  L  K 
Sbjct: 649 LNNLAFLIVETGGDFKEAQQLIERALAQVPGDVHALDTLGWIYVKKGMPDEAIQILT-KL 707

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                   +    L A  ++  DK    ++   A     L  N   +    A+ L++ 
Sbjct: 708 IQKSPSEPSYLYHLGAALVQKGDKPKARSALEAA-----LAKNLEPSDAGNARKLLAA 760



 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 82/244 (33%), Gaps = 15/244 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +A  +   A + L+           AV  L     R+  +  A     +A + + + P 
Sbjct: 211 YMARGRREDAEKTLQAWAAKNPKSIDAVLRLASHYVRVQRMADATSVLRQAAEDTANFPD 270

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               V   Y     WS A     +  + ++K   + R       +     +G+  A+   
Sbjct: 271 GRIRVGDFYAGLGRWSDAFEQYQKGLQSDSKNALKYRK----KMASAYLAQGNQQAAAQA 326

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL---EKIWKVNP-HP----EIANIYT 300
             + +K       A    A+  +   K   A+  L   +   K  P  P    E+   Y 
Sbjct: 327 LDQIVKDFPEDSDAKGARARLWLDMGKTDAADSALAEFQARTKAQPGDPSLLYELGRAYL 386

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
            L  +    +        E+ KE +     ++++AL     +QA   A   +++AP +  
Sbjct: 387 -LKGDLPAARSALTRA-AELKKEYLPPRFALAQLALNQKLSNQAIHAAEEILEVAPGEPR 444

Query: 361 FLLL 364
             L+
Sbjct: 445 ARLM 448


>gi|116622593|ref|YP_824749.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225755|gb|ABJ84464.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 354

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 7/169 (4%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            E +  L +   +  E+ Y  A +K E  + Q P          +     I D       
Sbjct: 183 RELVFQLGDAMASAMEKDYKEATQKFEAALQQYPNEPNVHFR--FGAFLNIQDSARGIEE 240

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             KA++++PD       +   Y+  +E   A+ +  +  K     +       IA     
Sbjct: 241 IRKAVELAPDHVPALVGLTMMYLKREEVDNALEYGERAVK----ASSGDFSTHIALGRAL 296

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             K D   +  +   ++KL      A    A +     +K+ A   L +
Sbjct: 297 LAKADPAGAAAELEVAVKLAPAVPEARFSLASAYSRLGRKQDAARELAE 345


>gi|326530660|dbj|BAK01128.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 613

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 22/188 (11%)

Query: 111 SQQHTFHNEYLVYL------LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           S +H F    +  L      L    A      + A +  + M   P     +  S+    
Sbjct: 185 SARHLFDQMPVRDLVSYNSMLSGHAA--AGDMDGARQLFDGM---PERDVVSWNSMLAGH 239

Query: 165 CRIGDLNSAQRYATKALDISPD---APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            R GD+  A+    +  D  P+     W   +++  Y  A +   A    +         
Sbjct: 240 TRCGDMEEAR----RMFDAMPERDVVSW--NSMLDGYAQAGDVLAARAVFD-GMPRRSTV 292

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           + N  + L AR     +   +  +      ++      + + + A  SL    + ++   
Sbjct: 293 SWNVVLALYARVKNWRECLRLFDAMMAVGAAVPNEKTFV-SVLTACGSLGDLERGKRVHD 351

Query: 282 ILEKIWKV 289
           ++ + W+ 
Sbjct: 352 LVRQRWET 359


>gi|325525901|gb|EGD03608.1| cellulose synthase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 456

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 84/267 (31%), Gaps = 23/267 (8%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY----LLEVQIALAERQYNIAHEKL 143
           L  G ++  A +   AR +      +   +   L+     LL  +               
Sbjct: 164 LSAGYLA--AGDASRARWLVQRALAREPDNAGLLLQYARILLAARQDALLGDAMR-RLAA 220

Query: 144 EMMLQIPATRE--FAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
             +     +      V  +  ++    + GDL          L   PD+P +  A+ + Y
Sbjct: 221 MSLSADQRSDFDRLNVEIVVRQADAVRQSGDLAGGYTVIAPWLAALPDSPDLQAALARLY 280

Query: 199 VLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             A + + A+        +   +     A +  A   +    GD  A+      +L+L  
Sbjct: 281 TSAGDAANALKCYRVALARRPDDAGLLIAAIYAASGAKAWRDGDAFAA-----SALRLAP 335

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI----ANIYTHLLSENTVGKLKR 313
           +         +   ++ K   A   L++       P +    A        ++ + ++  
Sbjct: 336 DDPALLAAIGRLYRAEGKLTLASQYLQRALLAANAPPVRSGRAQTNVPRSWDDAMRRI-G 394

Query: 314 ALRLEEINKESVESLVIVSKIALEMGS 340
           A  L   N    ++ V V++   + G+
Sbjct: 395 ANPLPGTNPFEGKTAVDVARAPADPGA 421


>gi|320580815|gb|EFW95037.1| mRNA splicing factor (Prp1/Zer1), putative [Pichia angusta DL-1]
          Length = 891

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 64/193 (33%), Gaps = 27/193 (13%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE---WSRAITFLNQKKKN---- 217
              GD+  A+    + L I+PD+  +  A ++     +    + +    L +K       
Sbjct: 572 KEDGDVEKAKAIIEEGLQINPDSEDLWFAALKLRSGEEARQLFVKCREQLGKKTARVWYK 631

Query: 218 AKEWNRNRAILLIARSLE--------------------NADKGDMIASYHDAIESLKLCD 257
              + R    L+ A+ L                       ++  +  +    ++   +C 
Sbjct: 632 NVTFERQNENLIAAKKLAEQGIQHHPKEFKLYLQWGQILEEENRLTQAAEIYLKGTLMCP 691

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
           NS +  +   ++        KA  IL++    NP  +   +   LL E    + +    L
Sbjct: 692 NSPLLWVYLVRAYEKLGNLIKARSILDQAVISNPFSDQIQLERVLLEERAHNRSQAERIL 751

Query: 318 EEINKESVESLVI 330
               K+   S V+
Sbjct: 752 STALKKLPNSAVL 764


>gi|125524780|gb|EAY72894.1| hypothetical protein OsI_00769 [Oryza sativa Indica Group]
          Length = 569

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 14/143 (9%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQ---------IALAERQYNIAHEKLEMMLQIPA 151
           PLA +  +        H   L   L  Q               +   A    + M   P 
Sbjct: 15  PLALRAAASPRVASAVHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAM---PP 71

Query: 152 TREFAVYSLYFESCRIG-DLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            R    ++    +   G D ++A+  +A  A   +        A++  +  + + +  + 
Sbjct: 72  GRTTFHWNALISAYSSGCDPDAARDAFARMAAAGTRPDAVTWTALLSAHARSGKHADVLQ 131

Query: 210 FLNQKKKNAKEWNRNRAILLIAR 232
              + +++  E N     + ++ 
Sbjct: 132 LFGEMQRSGCEGNAESMAVALSA 154


>gi|308809968|ref|XP_003082293.1| unnamed protein product [Ostreococcus tauri]
 gi|116060761|emb|CAL57239.1| unnamed protein product [Ostreococcus tauri]
          Length = 249

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 57/198 (28%), Gaps = 13/198 (6%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             E+    D  +A R A +  ++ P   W  EA  Q  V AK++  AI   +      + 
Sbjct: 11  LGEAYSRRDFATALRAARRLRELEPGLTWT-EAEAQISVDAKKFDEAIGAYDDAYAMCEG 69

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC------DNSIMASICAAKSLISQN 274
                A +L  R L      D   +  D  E L+LC       +    +           
Sbjct: 70  DAGAAARVLAGRGLAREGVYDFANALKDYDEVLRLCAEGGFAPDPYTVNARGTDDYNDAA 129

Query: 275 KKRKAEVILEKIWKVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           +  +     +         + A           +        LK    L      S ++ 
Sbjct: 130 RLFQGAKGFKNGMSTTQRLDGAIYAQANAALASVQLGEEQNALKSLEGLVRRAPNSADAR 189

Query: 329 VIVSKIALEMGSIDQAHA 346
             V+ +    G  + A  
Sbjct: 190 AAVASLYYSSGRFEDAEE 207


>gi|27383054|ref|NP_774583.1| hypothetical protein blr7943 [Bradyrhizobium japonicum USDA 110]
 gi|27356228|dbj|BAC53208.1| blr7943 [Bradyrhizobium japonicum USDA 110]
          Length = 482

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 74/232 (31%), Gaps = 11/232 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAP-----WVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
               D  +AQ    KA+ I P          T  +   ++   + +  +    +    A 
Sbjct: 248 ITREDNAAAQGLLEKAVAIDPAYGKALGLLATSHIFGAHMGWADMAATVPVAERAALAAV 307

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E +R  A      +     +     +  +   +L+L  N  MA      +L    + +  
Sbjct: 308 EADREDAWAHHGLAYTYLFRRRFDDALAEFELTLRLNPNFAMAHAFYGVTLCYAGRWQDG 367

Query: 280 EVILEKIWKVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
           +    +  +++P   +A        Y   +  N    L+ A        + V +  +++ 
Sbjct: 368 DAAARRALRLSPRDPLAAIYCGVAAYAQFIGRNYEASLQMARESMRQRADFVGAHRVLTA 427

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            A  +G    A +      +  P   +  + +++      + +  L   + A
Sbjct: 428 AAGMLGDPVLAASALEGLRRAQPGISLAWITSELPMLLEQDREHYLEGLRRA 479


>gi|219849677|ref|YP_002464110.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
           DSM 9485]
 gi|219543936|gb|ACL25674.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM
           9485]
          Length = 1838

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 27/178 (15%)

Query: 125 LEVQ-----IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           LE Q       LA+R  + A    E +LQ       A   L       G L+ A     +
Sbjct: 40  LEAQRILGEAYLAQRDLSAAIATFEQVLQADPENIPAHVGLGMAYEWQGRLDKAIAEFEQ 99

Query: 180 ALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKN-------------------AK 219
           AL+I PD P +   +V+ Y  A      A+                             +
Sbjct: 100 ALEIRPDMPELRAQLVRLYTEAWGSEHAALRLSRSGLARLYARGYMLPQAINEFKHFITE 159

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              R  A + +  +L       +  +     ++L+L  + + A +     L+ +  + 
Sbjct: 160 HPERLDAWVGLIEAL--WRHSQLDEAAETCRKALQLSPHLLKAHLVLGTILLQKGDQS 215


>gi|223934695|ref|ZP_03626615.1| serine/threonine protein kinase [bacterium Ellin514]
 gi|223896650|gb|EEF63091.1| serine/threonine protein kinase [bacterium Ellin514]
          Length = 1137

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 3/93 (3%)

Query: 171  NSAQRYATKALDIS---PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
              A   A + +++    P  PW    +      + +++ A   L + +++A ++      
Sbjct: 1009 TKALDLARRGVELRKGTPFLPWYQLCLGMAEYRSGQYANAEQTLAEAEQSAGKYPDLPGT 1068

Query: 228  LLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
              + R++    +G    +     E+        
Sbjct: 1069 ARLFRAMSLFRQGQSEKARAVFSEAEAQMPPFP 1101


>gi|33595502|ref|NP_883145.1| hypothetical protein BPP0814 [Bordetella parapertussis 12822]
 gi|33565580|emb|CAE40223.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 626

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 88/276 (31%), Gaps = 48/276 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++   R+M +              ++L  +IA  + +Y+ A  +L   +  PA R  A  
Sbjct: 354 DVQNQRQMATAPGATDAGAAAADAHVLLSRIAEDQGRYDEAIRELGR-IDDPAMRYSAH- 411

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
               ++                                          A+  +++     
Sbjct: 412 --MRQAT-------------------------------LRARQGRIDDALAMVDRADPQD 438

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E    R + ++ ++    D   +  +    + + K   +++      A     Q +  +
Sbjct: 439 DE---ERTLGVLTKAQILRDADQVDRAVAILVAADKAMPDTVEIKYELAMLYERQGRIDQ 495

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRL------EEINKESVESLVIV 331
            E +L ++  ++  P+ A+ Y + L      + +R    L       E++ E    L  +
Sbjct: 496 LERLLREVIALD--PDHAHAY-NALGYTLADRNQRLPEALDLITQALELSPEDPFILDSM 552

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
             +   MG    A      A  + P  +I   LA++
Sbjct: 553 GWVKFRMGEPSAAIEYLKRAYALRPEADIAAHLAEV 588



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 8/265 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            ++  ++A     Y  A   L  + +       A   L F+    G+L  A   A     
Sbjct: 92  RIVGAELAAQRGMYGTAAATLVTLARETGDPRLARRGLEFQ-LAGGNLPGALDAARAWSS 150

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++P+    +   +       E S     L    +   +  R++   ++      +   D 
Sbjct: 151 LAPNDIEASSTELALAAANGETSG----LATALRKRIDTARDKPAAIVQAMGVLSRLNDR 206

Query: 243 IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIAN--IY 299
             +     ESL      + A+  A A    +     +A          +P  E A   + 
Sbjct: 207 RLALRILDESLSDSARKLPAAHLALADVAQAAGDYPRAANEAYAALAADPKSEAAAQRVL 266

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +    +      +A      N ++ +  ++++    + G  D A A+     + +P   
Sbjct: 267 EYGAKVDATRAQHQARAFINRNPDARKLRLMLAGQIADGGDYDGALAELQAMARRSPEDF 326

Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384
             + +       +   D+   + Q 
Sbjct: 327 DLMFMQAQLAYKAGRLDQARGYLQQ 351


>gi|13472852|ref|NP_104419.1| adenylate cyclase Cya3 [Mesorhizobium loti MAFF303099]
 gi|14023599|dbj|BAB50205.1| adenylate cyclase; Cya3 [Mesorhizobium loti MAFF303099]
          Length = 589

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 16/208 (7%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA--KEWS----RAITFLNQKKK 216
                    +A+    +A+D+ P+       +   YVL     WS     ++    +   
Sbjct: 353 HRLTKETNVAARDVLQRAIDLDPNFASAHAFLALTYVLDYLNRWSASPPESMAQAEEVAT 412

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A   + +      A ++          +  +A  ++ L  N     +   ++L    + 
Sbjct: 413 RAVALDDSDPWAHWALAIAKLYTRRHDGAIDEAERAIVLNPNFAEGHVILGEALYYSGRP 472

Query: 277 RKAEVILEKIWKVNPH-PEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            +A     +   +NP+ P++         +     E  V  L    RL   N  +  S  
Sbjct: 473 EEALESFARAKTLNPYFPDVLLHFQALAAFQLGRYEEAVDLL--LQRLAR-NAVTDVSRA 529

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +++     +G   +A A     +++ P 
Sbjct: 530 LLAACYGHLGRFAEARAAWQEVLRLNPD 557


>gi|94984739|ref|YP_604103.1| tetratricopeptide TPR_2 [Deinococcus geothermalis DSM 11300]
 gi|94555020|gb|ABF44934.1| Tetratricopeptide TPR_2 [Deinococcus geothermalis DSM 11300]
          Length = 541

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 110/314 (35%), Gaps = 18/314 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
           +  AR +   +  Q+    E    L      LA+ +   A  +   +  +   R  A Y+
Sbjct: 100 LTQARALFEELIAQNYAQPEPHFGL--GLTLLAQGKLKEAAFEFTQLRALAPDRYEAPYN 157

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKEWSRAITFLNQ 213
           L   + R G  + A R   +A  ++     V       EA+  +   A +++   + L  
Sbjct: 158 LGVIATREGRFSDALRLYGEAATLAQGKAGVATERQVLEALATEQTRAGDFAGLSSTL-- 215

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +  A + N   A+  +A++   A  G   A+       L+     + A++  A   +SQ
Sbjct: 216 ARIVALDPNDTDALFRLAQARTLA--GQGAAALPQVYTVLQRQPARVDAALLLADIYVSQ 273

Query: 274 NKKRKAEVILEKIW-KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
               +A   L+    +V    + + +     +        R   L   +    +S    +
Sbjct: 274 GLPDRAVRELDAAAGRVLNGGDRSVLLLRKANILAATGDTRGAVLAAQDAVREDSRFAAA 333

Query: 333 -----KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
                ++ +  G    A A    A+K+AP+   +L      +     T +       AL 
Sbjct: 334 FARLGELLVLHGDRPGALAAYAQAVKLAPQNAAYLTAQAAVRLALGQTAQAGKDAAQALK 393

Query: 388 AMPDPLWISDDGYL 401
             PDP  ++   ++
Sbjct: 394 LKPDPATLARAQFV 407


>gi|260752756|ref|YP_003225649.1| hypothetical protein Za10_0516 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552119|gb|ACV75065.1| Tetratricopeptide domain protein [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 341

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             ++   A    +    +    ++ R   L  R+  +   GD   +  D  ++LKL    
Sbjct: 182 ANQDPGAARNAFDHALMSPVMPDKMRGNTLSDRARADVAVGDYAIARQDIDKALKLIPKD 241

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             A + +A     Q    +A+  + +  K  P
Sbjct: 242 ATAWLMSATLARHQGDLTRAKNDITEAEKFAP 273


>gi|170784776|ref|YP_001718692.1| hypothetical chloroplast RF34 [Trachelium caeruleum]
 gi|156598873|gb|ABU85689.1| photosystem I assembly protein ycf3 [Trachelium caeruleum]
 gi|157267524|gb|ABV26517.1| hypothetical chloroplast RF34 [Trachelium caeruleum]
          Length = 168

 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 10/108 (9%)

Query: 117 HNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSA 173
             E   Y  +   A +E  Y  A     E M     P  R + +Y++     R G+   A
Sbjct: 32  EKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTRNGEHTKA 91

Query: 174 QRYATKALDISPDAPWVTE--AVV-----QQYVLAKEWSRAITFLNQK 214
             Y  +AL+ +P  P      AV+     +Q +   +   A  + +Q 
Sbjct: 92  LEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQA 139


>gi|320180547|gb|EFW55478.1| hypothetical protein SGB_02447 [Shigella boydii ATCC 9905]
          Length = 477

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 33/115 (28%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A +        +         L+       + QY  A E     +    ++    Y L  
Sbjct: 204 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 263

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            + R  + ++   +  ++L   P    V        VL+     A     +  ++
Sbjct: 264 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 318


>gi|222149433|ref|YP_002550390.1| TPR repeat protein [Agrobacterium vitis S4]
 gi|221736416|gb|ACM37379.1| TPR repeat protein [Agrobacterium vitis S4]
          Length = 578

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 75/216 (34%), Gaps = 14/216 (6%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLEN 236
            KA D+   A      + +  +   + + A   L      +A     +R   L   +  N
Sbjct: 38  RKAEDLQQMACKAARDLAEISIRLHDHAGATELLQAVLLIHADPSAHSR---LADLAQIN 94

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               D IA Y  AI +         A     K      +  +A  +L      +P+  +A
Sbjct: 95  GRWPDAIAHYQAAIAAGGPNATLYSALAHCLKQAGRHQEANEAYDLLL---NHDPNHLVA 151

Query: 297 ---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                +  L++ +    L  A R    +   + +   + +    +G +D+A A     + 
Sbjct: 152 LSDKSFRSLIAGDFEQGLALAERAVSAHPGDITAHFYLGQALQGVGRMDEAKAAYRKVLD 211

Query: 354 IAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           + P   + +LLL  + +A   + D        ALHA
Sbjct: 212 LDPTHVDSYLLLGMLSRARPDDPDIA---AMQALHA 244


>gi|167648545|ref|YP_001686208.1| thioredoxin [Caulobacter sp. K31]
 gi|167350975|gb|ABZ73710.1| thioredoxin [Caulobacter sp. K31]
          Length = 304

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 48/129 (37%), Gaps = 1/129 (0%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L+A + E+ D GD+  +     + L++   ++ A    A+  ++      A  +     
Sbjct: 137 ALLAMAKESLDLGDLGGAAQAFAQVLQMDPANLKAIGGLARCYLAGGDLEGAAEVAATAP 196

Query: 288 KVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                P++ ++   L L+E+   +     +    N +  E+   ++K     G +  A  
Sbjct: 197 AEAKDPDLESVRAALALAEDAPSETGPFEKRLAANPDDHEARFELAKALAGAGQLQAASD 256

Query: 347 KAMLAMKIA 355
             +  +   
Sbjct: 257 HLLTIIDRD 265


>gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 740

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 26/287 (9%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +  G + +A   I  A +    V      +   L  L +  +     +++ + +  +  L
Sbjct: 132 VGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPAL--LGQASVEFNRGRFSESLQLYKRAL 189

Query: 148 QI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLA 201
           Q+    PA     +  L       G L+ A++   + L + PD      A+  +      
Sbjct: 190 QVFPGCPAAVRLGI-GLCRYKL--GQLDKARQAFDRVLQLDPDNVEALVALGIMDLQAND 246

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD---MIASYHDAIESLKLCDN 258
                    +++ ++  + +    A  L   +      G    +      A+        
Sbjct: 247 S--IGMRKGMDRMQQAFEIYPY-CASALNYLANHFFFTGQHFLVEQLTETALAVTTHGPT 303

Query: 259 SIMASICAAKSLISQNKKRKA----EVILEKIWKVNPH----PEIANIYTHLLSENTVGK 310
              +    A+S  S+    KA       +++    NPH    P        L      G 
Sbjct: 304 KSHSFYNLARSYHSKGDFEKAGMYYMAAIKET-NNNPHEFVFPYFGLGQVQLKLGELKGS 362

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +    ++ E+  ++ E+L  +  +  ++G  ++A      A K+ PR
Sbjct: 363 VFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPR 409


>gi|322712606|gb|EFZ04179.1| hypothetical protein MAA_01253 [Metarhizium anisopliae ARSEF 23]
          Length = 1324

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 61/204 (29%), Gaps = 15/204 (7%)

Query: 162  FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
              +    +    Q  A + L I  D      A +   +  ++              A   
Sbjct: 979  LLALLEHEKEEVQFAAAEVLRIQSDLSDTAIASLSALLEHEQ-----DTTRTAAAEALRS 1033

Query: 222  NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNKKR-K 278
              + +   I   L   + G    +   A E LK   +   I  +   A     ++  R  
Sbjct: 1034 QSHLSDTAIVSLLALLEHGQ-DTTQTAAAEVLKSQSHLSDITIASLLALLEHKKDTTRSA 1092

Query: 279  AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            A   L+  WK++    I ++   L  E    +   A  L         + +I+S I    
Sbjct: 1093 AAKTLKSQWKLSDA-AIGSLSALLEHEEENVRFAAAKALPRRAP----ATMIISLIVRLR 1147

Query: 339  GSIDQAHAKAMLAMKIAPRKEIFL 362
                +  + A  A+     +  +L
Sbjct: 1148 HKEQRVRSVAAKALGTC-TQRRYL 1170


>gi|293609060|ref|ZP_06691363.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829633|gb|EFF87995.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 569

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 44  DQALEQTMVAEFALAYDDIPNALHNYTVLAIKSNSTSIKQRALDV-ALEYNDLQAALNIA 102

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 103 THWVAQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 162

Query: 225 RAILLIAR---------------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           R +LL A                +   A  G +  +  +  ++L+         +  A  
Sbjct: 163 REVLLTALRSSAEKDNPSILALIANLEAQNGQLQTALTNINKALRRRPKVTSFILMKANL 222

Query: 270 LISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K  + N       +A I   +    +   L++  ++ E N ++ E
Sbjct: 223 LIALSDQEGALKWYAKSSRKNKKNLDIRLAEIRYLIQINQSQLALEKLEKIIETNPKAEE 282

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 283 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 336



 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 99/312 (31%), Gaps = 46/312 (14%)

Query: 91  GLMS-IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            L++ + A N  L   + +               L++  + +A      A +      + 
Sbjct: 183 ALIANLEAQNGQLQTALTNINKALRRRPKVTSFILMKANLLIALSDQEGALKWYAKSSRK 242

Query: 150 P----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--------------- 190
                  R   +  L     +I     A     K ++ +P A                  
Sbjct: 243 NKKNLDIRLAEIRYL----IQINQSQLALEKLEKIIETNPKAEEALFIAGLTSIDLKQYD 298

Query: 191 --TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              + +V     AK  + A  +L    +  + +   +A   +            + + +D
Sbjct: 299 KAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKAYYRLVDGSLYVVSRRNLIAIYD 358

Query: 249 AIESLKLCDNSIM---------ASICA---AKSLISQNKKRKAEVILEKIWKVNPH-PEI 295
             E+L      +          AS      A+ L     K+ A  +L++  K  P  PE+
Sbjct: 359 KQENLHDALRFLTQERVNYPQHASFLYQAQAEILKKMGNKKAALNLLDEAIKNLPDDPEL 418

Query: 296 ANIYTHLL---SENTVGKL-KRALRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAML 350
             IY  +L         KL K   +L ++   S   L   +  +AL+   + +A   A  
Sbjct: 419 --IYAEVLLLDPYTDRDKLDKTLKQLLQLEPNSPTYLNAYAYTLALQNRRLKEARQYAEQ 476

Query: 351 AMKIAPRKEIFL 362
           A++ AP +   L
Sbjct: 477 ALEYAPEQASIL 488


>gi|198470134|ref|XP_002133375.1| GA22854 [Drosophila pseudoobscura pseudoobscura]
 gi|198145309|gb|EDY72003.1| GA22854 [Drosophila pseudoobscura pseudoobscura]
          Length = 689

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 26/250 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176
            +    +++++ A    +  L       T+E    +      + GD +       S ++Y
Sbjct: 254 ARFEEGQKEHDRARIIYKYALDHLPKERTKEL-FKAYTIHEKKYGDRDGIEDVIVSKRKY 312

Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230
              + +  +P         ++      E         +   N    N     R    L I
Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEADGEKDLIRDTYERAIANVPPANEKNYWRRYIYLWI 372

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L L            +  A+  I   + ++A   L  
Sbjct: 373 NYALYEELEAEDTERTRQIYKTCLDLMPHKQFTFSKVWLLYAQFEIRCKELQRARKTLGF 432

Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              + P  ++   Y  L     E    +L    +  E   E+  + +  +++   +G  +
Sbjct: 433 AIGMCPRDKLFRGYIDLEIQLREFERCRL-LYEKFLEFGPENCVTWMKFAELENLLGDTE 491

Query: 343 QAHAKAMLAM 352
           +A A   LA+
Sbjct: 492 RARAIFELAV 501


>gi|163794243|ref|ZP_02188215.1| TPR repeat [alpha proteobacterium BAL199]
 gi|159180411|gb|EDP64932.1| TPR repeat [alpha proteobacterium BAL199]
          Length = 404

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/131 (9%), Positives = 41/131 (31%), Gaps = 8/131 (6%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-- 290
           ++++ + G    +     + L++     +A+   A+     N   +A+  ++        
Sbjct: 10  AIQHLNAGRSAEADAICSQVLRVQSTHPVANTLTARIARRANDPARAKRHIDAALAAAPD 69

Query: 291 --PHPEIANIYT--HLLSENTVGKLKRALRL--EEINKESVESLVIVSKIALEMGSIDQA 344
             P  ++   +       +  V   +R   L     +       ++ ++     G++   
Sbjct: 70  YVPARDLDARWAGDDAPVDTAVRAYRRLTTLEPASWSAWYDFGNLLQARAEDPAGAVACY 129

Query: 345 HAKAMLAMKIA 355
                LA    
Sbjct: 130 RRALTLAPSEE 140


>gi|121533463|ref|ZP_01665291.1| Tetratricopeptide TPR_2 repeat protein [Thermosinus carboxydivorans
           Nor1]
 gi|121308022|gb|EAX48936.1| Tetratricopeptide TPR_2 repeat protein [Thermosinus carboxydivorans
           Nor1]
          Length = 957

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +       +  A+++   + Q P      +  +   +  + D   A++ A +AL     
Sbjct: 593 AEALAGSGLHLAAYQQYYALAQTPDGEAAGLTGMLKTALAVNDYQKARQ-AYEALAGRYG 651

Query: 187 APWVTEAVVQQYVLAK 202
                 A++ QY   +
Sbjct: 652 KSKAVAAIMTQYDQRR 667


>gi|115528225|gb|AAI24850.1| LOC431836 protein [Xenopus laevis]
          Length = 508

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 58/179 (32%), Gaps = 19/179 (10%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A + + A+T  +    +    N    +    R+      G   ++  D   +++L  + 
Sbjct: 62  AAGQLAEALTHYHAAV-DGDPNNY---LTYYKRAAVYLAMGKFRSALPDLSRAIQLKPDF 117

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---------NTVGK 310
           + A +     L+ Q   ++A      + + +P+ E A      + E             +
Sbjct: 118 LAARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQLERVQEVERNVGGASEAYER 177

Query: 311 ------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 +    ++ E +     +  + ++  L++G +  A        K+        L
Sbjct: 178 RDYYGAIALLEKVIEFSPWDPSARELRAECYLQVGELSNAVQDLKPTTKLRNDNRAAFL 236


>gi|115483264|ref|NP_001065302.1| Os10g0548200 [Oryza sativa Japonica Group]
 gi|110289525|gb|ABB47960.2| TPR Domain containing protein, expressed [Oryza sativa Japonica
           Group]
 gi|113639834|dbj|BAF27139.1| Os10g0548200 [Oryza sativa Japonica Group]
 gi|215737243|dbj|BAG96172.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222613221|gb|EEE51353.1| hypothetical protein OsJ_32362 [Oryza sativa Japonica Group]
          Length = 1196

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 47/168 (27%), Gaps = 16/168 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESC-----RIGDLNSAQRYATKALDI 183
                    A +  +      P   E        E+        G  +       +A   
Sbjct: 85  YALAGDAQRAAKCYQRAATLNPDDAEAG------EAVCDLLDLEGKESLEIALCKEAAGK 138

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           SP A W    +    V  K+WS AI  L    +         A L  A  L     G   
Sbjct: 139 SPRAFWAFRRLGYLQVHQKKWSEAIQSLQYAIRGYPT----CADLWEALGLAYHRLGMFT 194

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           A+      +++L  + + A I +    +     RK         ++ P
Sbjct: 195 AAVKSYGRAVELDGSKVFALIESGNIQLMLGYFRKGVEQFRSALEMAP 242


>gi|298709280|emb|CBJ31218.1| methyltransferase [Ectocarpus siliculosus]
          Length = 551

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 5/95 (5%)

Query: 198 YVLAKE-WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             L ++    A    +   ++A       A  L  R++ +   G       DA ++ +L 
Sbjct: 13  QCLQEDKLDEAAELCSAVLRSAP----RNARGLYLRAVASQRAGRPKEGAEDACQAARLR 68

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +     + A   L       +A  + EK   V+P
Sbjct: 69  PDLPSVQLMAGSLLCRNKCFGRALAVYEKALDVSP 103


>gi|292670345|ref|ZP_06603771.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292648076|gb|EFF66048.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 609

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 16/167 (9%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYV--LAKEWSRAITFLNQKKKNAKEWNRNR 225
           GD   A     +      D       V++     +  +W+RA    ++            
Sbjct: 436 GDSERALMLMERVFASPHDESRAVSYVIRARAYAVRGDWTRARADADKGVAEDP----KD 491

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               + RS      GD   +  DA+++++    +    + AA+      ++ +A     K
Sbjct: 492 VYTWLNRSDVLRMMGDRDGALADAMKAIETDAKNPYGYLIAAELYDEMGEQEQARTYFAK 551

Query: 286 IWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
           ++ V P      P+    Y   + +      KR    +++ +E+ +S
Sbjct: 552 LYAVEPKAVGRIPD---AYLESVDKRAYE--KRIKEQKKVREENEKS 593


>gi|238897908|ref|YP_002923587.1| protein in late step of protoheme IX synthesis with
           tetratricopeptide repeats (TPR) domain [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465665|gb|ACQ67439.1| protein in late step of protoheme IX synthesis with
           tetratricopeptide repeats (TPR) domain [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 253

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 62/204 (30%), Gaps = 26/204 (12%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M R++   F   + I SF++ S     V I   +    T+   ++ +L  F   +  +  
Sbjct: 1   MWRILLSVFFPLVAIVSFLVFSSDQGYVLIRVDHYDIETTVTAMIILLVTFFLFFFFITQ 60

Query: 61  VSRFFLSCPAMLFHMLHKR---NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117
             +   +    L      R     +K  +AL   L           +     +SQ     
Sbjct: 61  FLKSIFN----LRRRFIHRKSLKQEK--EALIKFL------EGDFQKVETKLMSQIKQAE 108

Query: 118 NEYLVYLLEVQIALAERQYNI-------AHEK----LEMMLQIPATREFAVYSLYFESCR 166
           N    YLL       E ++         A +          Q    R     +       
Sbjct: 109 NPIFNYLLAAMATEKESRHADSDQYLAQAEQYIKQKFTGRKQAEKNRLTLNITRVRIQLS 168

Query: 167 IGDLNSAQRYATKALDISPDAPWV 190
            GD++ AQ      L  +P+ P V
Sbjct: 169 RGDIDLAQTGIYPLLKKAPEHPEV 192


>gi|262200027|ref|YP_003271236.1| Dynamin family protein [Haliangium ochraceum DSM 14365]
 gi|262083374|gb|ACY19343.1| Dynamin family protein [Haliangium ochraceum DSM 14365]
          Length = 1164

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 61/165 (36%), Gaps = 3/165 (1%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDL 170
                 +++   L   +I + E + + A + LE ++           SL   +   + D 
Sbjct: 15  ADELLPDDFREDLAAARIMVTEGRADAAMQILETLIA-QRPDHVGALSLMGAARLELDDP 73

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
             A+R    AL + PDA   +  + Q  V+  +  RA        ++A       A+   
Sbjct: 74  MGARRMFEDALRMRPDAAAASLGLGQASVIMGDLDRAQDAFRDAMRSAGGDRSVLALAYR 133

Query: 231 ARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQN 274
              + +  +G++  +  +  +++ +  D+ ++ +      L    
Sbjct: 134 GLGITHRQRGELDKAIRELRKAMAENSDDLLVRAALGEALLADPG 178


>gi|220920570|ref|YP_002495871.1| Sel1 domain-containing protein repeat-containing protein
           [Methylobacterium nodulans ORS 2060]
 gi|219945176|gb|ACL55568.1| Sel1 domain protein repeat-containing protein [Methylobacterium
           nodulans ORS 2060]
          Length = 370

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 27/109 (24%), Gaps = 19/109 (17%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--RE 154
           A    LA+ +     Q     N     LL  + A        A     +      +  R 
Sbjct: 279 AGESALAKSLTQRAQQALRLGNVSGARLLLQRAAS-SGD---AEATFMLAQTYDESFLRH 334

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             V  L        D   A+ Y   A            A +Q+   +  
Sbjct: 335 LGVRGL------KADPEQARTYYDAAAR-------AGYAGIQRQAKSGR 370


>gi|86359176|ref|YP_471068.1| adenylate cyclase protein [Rhizobium etli CFN 42]
 gi|86283278|gb|ABC92341.1| adenylate cyclase protein [Rhizobium etli CFN 42]
          Length = 622

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 82/253 (32%), Gaps = 48/253 (18%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA------ 151
           ++PL R +           +    +             + A    E  +   P       
Sbjct: 386 DVPLRRILDMSTRALALDPDLPEAHASHGLALHQSGYDDRAAAAFERALTLDPNLFEANF 445

Query: 152 --TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKE 203
              R F +   + ES          +Y T+A +I PD            + + + V  + 
Sbjct: 446 HYARFFFMRGNFAES---------VQYFTRAAEIRPDDYVSPIHLMAAYSSLGRPVDTEN 496

Query: 204 WSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           W+R     A   LN   +N+   +R         +L  A  GD   +   A  ++ +  +
Sbjct: 497 WARLGLLRAERALNLNPENSGPAHR--------GALALAHLGDAARARDWAARAIAIDPD 548

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL--SENTVGKLK---R 313
            I+A    A          +A  +LEK   + PH   +++Y      +++ +  ++   R
Sbjct: 549 DIVAQYNLACVYSVLGDVDQAIDLLEK---LLPH---SSVYHIKWFNNDSDLDNIRDDPR 602

Query: 314 ALRLEEINKESVE 326
             +L        E
Sbjct: 603 FRKLLAAAMTERE 615


>gi|308500360|ref|XP_003112365.1| CRE-BBS-8 protein [Caenorhabditis remanei]
 gi|308266933|gb|EFP10886.1| CRE-BBS-8 protein [Caenorhabditis remanei]
          Length = 506

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 6/99 (6%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQ 148
           G + +   ++P A + +         H+E LV L  L  +    E + + A       + 
Sbjct: 395 GQVMVDVGDLPSAARAYRLALTHDPDHSESLVNLGILRHR----EGRTDEARSLFGSAIS 450

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                    Y+L       G  +  +R   +AL+  PD 
Sbjct: 451 KNPLMFEGNYNLALVCAAQGKYHECRRLIERALEAFPDH 489


>gi|302812466|ref|XP_002987920.1| hypothetical protein SELMODRAFT_447165 [Selaginella moellendorffii]
 gi|300144309|gb|EFJ10994.1| hypothetical protein SELMODRAFT_447165 [Selaginella moellendorffii]
          Length = 647

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 11/154 (7%)

Query: 68  CPAMLFHM--LHKRNYDKGYK---ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
            P+         KRN D+  +   ++   L +IA  +   A  + S       F  + L 
Sbjct: 104 DPSDALRYSERSKRNADRATQYERSVMEALDAIAEGSYDKA--LSSQSKVLENFPKD-LA 160

Query: 123 YLLEVQI-ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD-LNSAQRYATKA 180
            L   Q  A +  + ++  +    +L +   R + +Y +   S    D  + A+  A +A
Sbjct: 161 SLKRAQGMAFSRGKSHLMLKFASQVLHVNRDRAY-MYGMLAFSLVENDRTDEAEVAARRA 219

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           L I     W   A+   +   +++  AI F+   
Sbjct: 220 LSIEKHDVWAQHALCHVFQERQQYKDAIMFMESN 253


>gi|296157613|ref|ZP_06840448.1| MCP methyltransferase, CheR-type [Burkholderia sp. Ch1-1]
 gi|295892385|gb|EFG72168.1| MCP methyltransferase, CheR-type [Burkholderia sp. Ch1-1]
          Length = 465

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 29/94 (30%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L   +      +   A   +   L   A    A Y L   +   GD N A+ +  KAL +
Sbjct: 366 LQAARALADAGRLAQAESAITAYLAHHAPHADAFYLLGVLADANGDANLARGHYRKALYL 425

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            P        +     L  +   A   + +  + 
Sbjct: 426 DPQHAEALAHLATLLELEGDRDGARLLMQRASRA 459


>gi|288962801|ref|YP_003453095.1| TPR repeat protein [Azospirillum sp. B510]
 gi|288915067|dbj|BAI76551.1| TPR repeat protein [Azospirillum sp. B510]
          Length = 270

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 38/118 (32%), Gaps = 7/118 (5%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAIL 228
           ++A+  A     ++  A      ++   +     ++ RA+  L +    +         +
Sbjct: 55  DAARAGAHIRTSLAAKADNAPGHLLAGRIARSCGDFERALFHLGRAAAMSPSLE-----I 109

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           L+ ++      GD   S        +       A+    + L      R A  +LE +
Sbjct: 110 LLEQARTVDAVGDRNRSIDAWRAVTRANPGLPEAAARLGRLLFEDGLLRDAAAVLEAV 167


>gi|260220851|emb|CBA28830.1| hypothetical protein Csp_A09100 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 385

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 60/218 (27%), Gaps = 34/218 (15%)

Query: 177 ATKALDISPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232
           A +AL       +  +A +        +++W  A     + + + +  +    A  L  +
Sbjct: 128 AEEALLKLEGTRFEAQARLALLANYERSRDWEHAAGIARKLEASGQGSFTGRLAHYLCEQ 187

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     K D   +     +++          +  A  L    +  ++  +L      +P 
Sbjct: 188 AATLIAKADSAGAQSLLQQAIDSAPQVPRPRMDMAALLTKSGQAAQSCRVLTDALHASP- 246

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                                                ++++ A+  G I +         
Sbjct: 247 -----------------------------PAIPLIAPLLAQSAIASGQIAETLELLKATY 277

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
           +  P  ++   +  +E + +  T     W    L   P
Sbjct: 278 QEVPSLDVLDAIVSLEASTTELTPTARDWYARHLEKEP 315


>gi|253996887|ref|YP_003048951.1| hypothetical protein Mmol_1520 [Methylotenera mobilis JLW8]
 gi|253983566|gb|ACT48424.1| tetratricopeptide repeat protein [Methylotenera mobilis JLW8]
          Length = 390

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 12/133 (9%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNA 218
           L  +  + G  + A+       D     P    A+++ YV  +EW RAI      ++ + 
Sbjct: 114 LAQDYLKAGLFDRAEELFETLDDDRYRQP-ALRALLEIYVREREWERAIKAATELERLSG 172

Query: 219 KEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAKSLISQNK 275
             +    +      ++++    D  ++      A+ + K C   + A++          +
Sbjct: 173 VPFRVEISHYYCEMAVKSKLANDTHSARFELDLALSANKNC---VRANVLLGDLEAESGE 229

Query: 276 KRKAEVILEKIWK 288
                 +    WK
Sbjct: 230 H----KVAISTWK 238


>gi|218439517|ref|YP_002377846.1| hypothetical protein PCC7424_2562 [Cyanothece sp. PCC 7424]
 gi|218172245|gb|ACK70978.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 364

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 82/274 (29%), Gaps = 48/274 (17%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G +     N P A + +          N    Y L   +A      N A      M   P
Sbjct: 84  GYLYSLQGNFPAAVRAYQQALALE-PSNPAFYYALGYNLAHTGDYSNAATAYYYAMQLEP 142

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE----AVVQQY-------- 198
                    L     R  D + A       L + P+     E    A+++Q         
Sbjct: 143 K-NLKHYIGLGVVLLRQKDYDKAIEVYQWVLALDPNNQEAHEIMGVALLEQKRTSEAISF 201

Query: 199 ----------------------VLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLE 235
                                 +   ++ R +  L Q ++++   +     I +I    E
Sbjct: 202 LENAVEKFPGSTELKLQLASVSLAQGDFDRGLNLLEQVERRDPSNYKIQMKIAIILEKKE 261

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE 294
             +      +      +  L   SI A+    +  ++Q     A V+ +++ ++ P +P+
Sbjct: 262 RYED-----ALTAYRRATYLDPKSIEANAGIGRVFLAQKDYLGAIVVYKELAELAPNNPD 316

Query: 295 I-----ANIYTHLLSENTVGKLKRALRLEEINKE 323
           +       +      +     L++A +L +   +
Sbjct: 317 VYYNLGLALKGRDRKQEAKQALEKARQLYQSRND 350


>gi|126179259|ref|YP_001047224.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
 gi|125862053|gb|ABN57242.1| Tetratricopeptide TPR_2 repeat protein [Methanoculleus marisnigri
           JR1]
          Length = 1069

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 16/223 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            RIGD   A     K L  +P +  +   +   Y+   ++S+A+   ++      E    
Sbjct: 161 ERIGDFREAAACFEKILRTNPGSTDLLSRIGAAYLNQGDYSKAVGLFDRVL--DTEPQNI 218

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A+   AR+LE+       A     I +  L   +I A       L+   K   A    E
Sbjct: 219 DALYGKARALEHLGLFQEAADCGAGIVA--LEPENIPAWYHRGSMLLRAGKHEDALECFE 276

Query: 285 KIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV----IVSKIALEMG 339
           K+   +P H  +   Y   +  + +G+ +RA++  +   +  +  V             G
Sbjct: 277 KVALADPDH--VPVRYAMGMVYDALGRYERAVKSFDRILKHDQGQVQIWYARGMALFRFG 334

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL-----LAQIEQANSHNTDK 377
              +A       ++      +  +     LA  E+       +
Sbjct: 335 QYAEAIRSFDRVLESRATTGMKWIGDGTDLALFERDEGGAPRR 377


>gi|296122801|ref|YP_003630579.1| hypothetical protein Plim_2555 [Planctomyces limnophilus DSM 3776]
 gi|296015141|gb|ADG68380.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
           DSM 3776]
          Length = 804

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 73/220 (33%), Gaps = 11/220 (5%)

Query: 72  LFHMLHKRNYDKGYKA---LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
           L   +  +   KG +A   L   ++S +     L  ++ +   +     N  L + L  +
Sbjct: 337 LQKYIDAQRQSKGREAYELLSQ-ILSRSGLEGELIDRLTAIAEKDQ--RNSTLQFFL-AE 392

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                  Y  A +  E  L+           L     +    +       + L  +P   
Sbjct: 393 KLTDRGDYEKAEKIYEASLKGSR-DLKGYLGLSRLYRKQKVADKLLDTLGRGLSQAPPDG 451

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI-ASYH 247
            V E   +   +AK+       ++  ++ A    R           + A +G+ I A+  
Sbjct: 452 -VDEIEAEFESVAKDRELVGLVIDAGRRQASAEPRELTFEEAYLVAKLASQGEQIDAAIE 510

Query: 248 DAIESLKLCDNSIMASIC-AAKSLISQNKKRKAEVILEKI 286
              ++ ++  +     +   A+ L+  ++   A  +LE+ 
Sbjct: 511 FFRKAKEIAPDRGGIVLSDLAEMLLKADRYADAAQVLEEA 550


>gi|297567352|ref|YP_003686324.1| hypothetical protein Mesil_2978 [Meiothermus silvanus DSM 9946]
 gi|296851801|gb|ADH64816.1| Tetratricopeptide TPR_4 [Meiothermus silvanus DSM 9946]
          Length = 632

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 9/130 (6%)

Query: 165 CRIGDLNSA-QRYATKALDISPDAPWVTEAVV--QQYVLAKEWSRAITFLNQKKK---NA 218
              G    A + YA  A        +   A +  +  +       A+    +  +     
Sbjct: 480 LSEGQPEQAERIYAELAQITHRREDYAALANLWVRVLLECGREEEALQVARRALRLTEGL 539

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNK 275
             + R RA L    +L   D    + +    + +L+   L      A +  A++ ++  +
Sbjct: 540 PPFFRRRAQLAYGMALSLRDPTQGVEALQAVLPALREPLLAPRLAQAGLYLARAQLALGQ 599

Query: 276 KRKAEVILEK 285
              A+  +E 
Sbjct: 600 TAAAKATVES 609


>gi|167620865|ref|ZP_02389496.1| TPR domain protein [Burkholderia thailandensis Bt4]
          Length = 781

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 6/144 (4%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFES 164
            S         ++ +  +L V +    ++   A  +   ++++      A     L   +
Sbjct: 235 ASASRALELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHA 294

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R      A     +A++++P+A      +    +       AI  L +  +     +  
Sbjct: 295 QRR--YEEAVAACRRAVELAPNAAPANGTLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVT 352

Query: 225 RAILLIARSLENADKGDMIASYHD 248
            + +L   +L + D  D      +
Sbjct: 353 HSAMLF--ALVHDDAVDPAQLLEE 374


>gi|126640888|ref|YP_001083872.1| putative signal peptide [Acinetobacter baumannii ATCC 17978]
 gi|213156617|ref|YP_002318278.1| hypothetical protein AB57_0885 [Acinetobacter baumannii AB0057]
 gi|215484439|ref|YP_002326672.1| Tetratricopeptide repeat family protein [Acinetobacter baumannii
           AB307-0294]
 gi|239501209|ref|ZP_04660519.1| hypothetical protein AbauAB_02746 [Acinetobacter baumannii AB900]
 gi|301346839|ref|ZP_07227580.1| hypothetical protein AbauAB0_11346 [Acinetobacter baumannii AB056]
 gi|332855562|ref|ZP_08435936.1| tetratricopeptide repeat protein [Acinetobacter baumannii 6013150]
 gi|332868379|ref|ZP_08438125.1| tetratricopeptide repeat protein [Acinetobacter baumannii 6013113]
 gi|126386772|gb|ABO11270.1| putative signal peptide [Acinetobacter baumannii ATCC 17978]
 gi|213055777|gb|ACJ40679.1| hypothetical protein AB57_0885 [Acinetobacter baumannii AB0057]
 gi|213988264|gb|ACJ58563.1| Tetratricopeptide repeat family protein [Acinetobacter baumannii
           AB307-0294]
 gi|332727386|gb|EGJ58819.1| tetratricopeptide repeat protein [Acinetobacter baumannii 6013150]
 gi|332733438|gb|EGJ64619.1| tetratricopeptide repeat protein [Acinetobacter baumannii 6013113]
          Length = 545

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 20  DQALQQSMVAEFALAYDDIPTALHNYTVLAIKSNSTTIKQRALDV-ALEYNDLQAALNIA 78

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 79  THWVVQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 138

Query: 225 RAILLIARSLENADKGDMIASYHDAIES---------------LKLCDNSIMASICAAKS 269
           R +LL A           I +    +E+               L+         +  A  
Sbjct: 139 REVLLTALRSSAEKDNPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANL 198

Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K    +K N    +A +   +        L++  ++ E N  + E
Sbjct: 199 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIESNPHAEE 258

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 259 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 312



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 365 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 422

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 423 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 464


>gi|219849447|ref|YP_002463880.1| LuxR family ATP-dependent transcriptional regulator [Chloroflexus
           aggregans DSM 9485]
 gi|219543706|gb|ACL25444.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Chloroflexus aggregans DSM 9485]
          Length = 917

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 74/268 (27%), Gaps = 38/268 (14%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE---VQIALAERQYNIAHEKLE----- 144
           +++   +     +            N+ L   +         A+     A +        
Sbjct: 483 LAVLRGDNDRVLQEGQQALAWLQTDNQALRMRVAKDLGYAYFAQGDLMRAEQAFSEAIVN 542

Query: 145 ----------MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
                      M         A+      + +                 SP        +
Sbjct: 543 GFNAGLPYISAMATSDDAYTKALRGSIGAAIQTCRETINHMLRRNRDRASPGIGLPFLTL 602

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-ARSLENADKGDMIASYHDAIESL 253
              + +  E++ A+  L + + + K  N    + L+   +  N  +GD+  +     ++ 
Sbjct: 603 ADLHGVRHEFAGALPALAEAESSIKPGNTTSYLCLLIVTARINRARGDVAGALRVVRQAR 662

Query: 254 KLCD----NSIMASI--CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
            L      + ++A +    A+  + Q     AE +LE       HP +      + +   
Sbjct: 663 FLARQRKIDWVLAVLNGFEAQLALEQGDLVTAEYLLEA----QLHPPVEFRMMPIAAFYA 718

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIA 335
              + RA           E  +  ++ A
Sbjct: 719 REHIIRAQ---------YEWRLARARAA 737


>gi|298706209|emb|CBJ29250.1| Tetratricopeptide TPR_2 repeat protein [Ectocarpus siliculosus]
          Length = 459

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 49/289 (16%)

Query: 133 ERQYNIAHEKLEMMLQI-----PATREFAV--YSLYFESCRIGDLNSAQR-----YATKA 180
                 A +    +L+       A R   +  Y         GD + A       Y  +A
Sbjct: 96  AGDSEAAKDTYSALLEATPRHADALRLLGLTWYGDAIRIESSGDGSVASAIDIAGYFEQA 155

Query: 181 LDISPDAPWVTEAVVQQYVLAKEW------SRAITFLNQKKKNAKEWN------RNRAIL 228
                 A    +A  + Y++  +       S A+    +  ++A + N      R +A  
Sbjct: 156 QQFVWRAVLCAKAGREVYLILGDLGEVLRGSGALQDAERVLRSALQSNSLPTHARRQATF 215

Query: 229 LIARSLENA--DKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILE 284
            +A +L     +      +     +  +  D        + A  +    +  R+A + L 
Sbjct: 216 NLAVTLIQLRGETRKPAKATERPHDRRRYDDEVEELLRGVVADGAGTVDSLTRRATMQL- 274

Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKL---KRALRL-----EEINKESVESLVIVSKIAL 336
                        ++    S++        K    L       +N     +   + +  L
Sbjct: 275 ------------GLFARTRSDSAAAVYWMEKAVRSLQFVFNVSLNPGCPSTAQELGRALL 322

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           E G  ++A      A+ + P     L+ A ++++ S N  +       A
Sbjct: 323 ESGRANEATEVLKQALALDPATPGPLMNAALQRSESGNLVQARELYSRA 371


>gi|114797202|ref|YP_762218.1| putative thioredoxin [Hyphomonas neptunium ATCC 15444]
 gi|114737376|gb|ABI75501.1| putative thioredoxin [Hyphomonas neptunium ATCC 15444]
          Length = 295

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 42/149 (28%), Gaps = 19/149 (12%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR-------- 175
           L + + A  +    +A E    +LQ       A+  L       GD + A+         
Sbjct: 127 LSQAEAASQQGDIALATEIYSAVLQQEPENIAAIAGLARCHLANGDKDQAEATLALVPEA 186

Query: 176 -----------YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
                       A + +  +P    +  A+        +  +      Q     K  +  
Sbjct: 187 KKNDSVIKGVRLAIEMMADAPPPSELDAALTAVMASPGDHDKRFELAEQYAAAGKYQDAV 246

Query: 225 RAILLIARSLENADKGDMIASYHDAIESL 253
             +L+I  +  + + G          E+ 
Sbjct: 247 DHLLMILSAKLDWEGGKAKDKLLKIFEAA 275


>gi|99080684|ref|YP_612838.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99036964|gb|ABF63576.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 1619

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 39/206 (18%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           V  +   +   GD  +A RY  +AL      P    A +            +  L+ ++ 
Sbjct: 176 VRGVL--ARSNGDRRAADRYFEQALR-RSTQPDALTAWLDNR---------LRVLSAERA 223

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NK 275
           +     RN  +  I  +++ A+      +                      K L    N 
Sbjct: 224 D-----RNTRLNTIREAIDWANTNRSDGALRHI-----------------GKILWEDFNL 261

Query: 276 KRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            R A  +    +++NP PE A + +  + +++    +    +       +   ++I +  
Sbjct: 262 PRDAHSLFRAAYQMNPSPEAAHDAFGSIGNDDFDAGIAVLNQGLRDFPNNYH-VLIAANW 320

Query: 335 ALEMGSID--QAHAKAMLAMKIAPRK 358
           A      D  +A    M A+++AP +
Sbjct: 321 AWSEFKFDPQKAEGYGMRAIEMAPTQ 346


>gi|116621121|ref|YP_823277.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224283|gb|ABJ82992.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 649

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 11/199 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIARSLENADKGDMIASYHDAI 250
           V+   V   +   A T L ++            ++AI    R+LE  D   M    + AI
Sbjct: 140 VISAAVPTGDVLGAATALARQISPKLAPYGTRNSQAIAGYVRALEAGDATVMELGLNVAI 199

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLL----SE 305
            +     +        A+  + +  +  A   +E+   + N  PE+      L+    S 
Sbjct: 200 AA---DPDFAPPYRLLAEMKLQRQDRAGAVSTVEQALSRGNAIPELERARLQLVAAELSG 256

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
               +     +L +++     +   +   AL       A      A+++ P     L   
Sbjct: 257 TPEARQNALSKLTQLDSSDAATWRTLGDTALGRHDYRTASQAYGKALELQPDDVALLNSL 316

Query: 366 QIEQANSHNTDKILYWTQS 384
               A + + D  +   + 
Sbjct: 317 GYADAQAGDLDGAMKALRR 335



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 87/282 (30%), Gaps = 21/282 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A            L  + Q+ ++      +L   +    D  +A +   KAL++ PD  
Sbjct: 251 AAELSGTPEARQNALSKLTQLDSSDAATWRTLGDTALGRHDYRTASQAYGKALELQPDDV 310

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +  ++      A +   A+    +  +  +      A  L +    N   G +  +   
Sbjct: 311 ALLNSLGYADAQAGDLDGAM----KALRRYEALRPKEANPLDSMGDVNLMDGRLAEAEDF 366

Query: 249 AIESLKLCDNS--IMASICAAKSLISQNKKRKAEVI----LEK-IWKVNPHPEIANI--- 298
            +++ K   +     + + AA + +       A  I    LE      +P  +       
Sbjct: 367 YLQAAKKDPSFNNQSSLMKAALAHLLTGNASGANRIFDRYLEARTEAKDPIVDYRRAEWT 426

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA---LEMGSIDQAHAKAMLAMKIA 355
           +     +    ++       E       +    +++A   + +G  + A   A  A+ +A
Sbjct: 427 WISGHRKMAAQQMGAFALKAESGPLREMASRAYAELATWSIMLGDREMAMRLAQKAISLA 486

Query: 356 -PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS 396
            P      L+A+              WT  A    P P   +
Sbjct: 487 GPSSAGNALVARFFAL---PPASSSEWTVRAEQQFPGPAQTA 525


>gi|119356061|ref|YP_910705.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119353410|gb|ABL64281.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 308

 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 52/193 (26%), Gaps = 10/193 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148
            GL++    N   A  +  Y S      +    Y        A   Y  A   + + +  
Sbjct: 67  RGLVNGQLGNFSAA--IADYTSAIKLNPHFPGTYNNRGFAHAATGNYRAAIIDISKAIAL 124

Query: 149 IPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
            P   E             + D   A    TKA  ++P              LA     A
Sbjct: 125 DPLIPELYNNRG--TVKMSLKDYIGAIEDFTKAARLNPKLAGPFNNRGLAKSLAGNIMGA 182

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I          + ++         R       GD   +  D  ++L L  + I A    A
Sbjct: 183 IEDFTLALVRDQTYD----AAWYNRGNARLSSGDFNGAIEDYKKALVLQPDLIEAYNNRA 238

Query: 268 KSLISQNKKRKAE 280
            +  S    R A 
Sbjct: 239 FAKASLGDYRGAV 251



 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 4/136 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                     A E   + L    T + A Y+        GD N A     KAL + PD  
Sbjct: 172 AKSLAGNIMGAIEDFTLALVRDQTYDAAWYNRGNARLSSGDFNGAIEDYKKALVLQPDLI 231

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                         ++  A+  +N   +   E     A+    R L     GD+  +  D
Sbjct: 232 EAYNNRAFAKASLGDYRGAVDDMNILIEKGTE----NAMTYYNRGLAKKMLGDLNGAIAD 287

Query: 249 AIESLKLCDNSIMASI 264
            +++  L D   ++++
Sbjct: 288 FLKASNLGDTLSVSAL 303


>gi|302344627|ref|YP_003809156.1| Sporulation domain protein [Desulfarculus baarsii DSM 2075]
 gi|301641240|gb|ADK86562.1| Sporulation domain protein [Desulfarculus baarsii DSM 2075]
          Length = 419

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 3/182 (1%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
              +       L + LE +    + QY  A   L   L +       ++ L       GD
Sbjct: 100 AQGRALVQPTTLAFRLEGKALFDQGQYAQAERLLLKDLDLNPDSALCLHLLGLCRVWAGD 159

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +A  Y  +AL++SP  P +        +     ++A    +Q      +       L 
Sbjct: 160 HLAAVAYFDQALEVSPRNPAIIGDKASSLLAMGRLAQAAELYDQALALGGDNPILLNNLA 219

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              + +   + D+  +   A  +++L  +     +   +   ++ +   A   L +  ++
Sbjct: 220 WVLANQ---RKDLARAERMAKRAVELAPDQAALWVTLGEVQAARGRHASAVSSLRRALEL 276

Query: 290 NP 291
           NP
Sbjct: 277 NP 278


>gi|256391970|ref|YP_003113534.1| XRE family transcriptional regulator [Catenulispora acidiphila DSM
           44928]
 gi|256358196|gb|ACU71693.1| transcriptional regulator, XRE family [Catenulispora acidiphila DSM
           44928]
          Length = 782

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 51/185 (27%), Gaps = 18/185 (9%)

Query: 90  TGLMSIAA--HNIPLARKMHSYVSQQHTFHNEY----LVYLLEVQIALAE-RQYNIAHEK 142
            G+ ++A        A  + +   Q            +  +L    +L    +   A + 
Sbjct: 574 RGVAAVAEDRGEFTRALDLLAEARQLPLADRYPTEVAIAAVLTAHHSLLALGRVAEAADV 633

Query: 143 LE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---- 195
                   Q P  R  ++  L       GDL  A  Y  +A     D    + A +    
Sbjct: 634 ARDVLATAQDPTPRITSLRVLGRARLSDGDLPGAVTYFQEAEAACRDNQDASFAAICQGD 693

Query: 196 --QQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIE 251
             +        + A+         A ++        L  A +      GD   +     +
Sbjct: 694 VAEALSRLGRHAEALDRHEAALAWATDFGDVYREIYLREAFARSCLAAGDPDRAVDQFRQ 753

Query: 252 SLKLC 256
           +L L 
Sbjct: 754 ALALA 758


>gi|254409568|ref|ZP_05023349.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196183565|gb|EDX78548.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 861

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 20/166 (12%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISP--DAPW 189
           ++   A    E  +   P   E  V   +   + +      A     KA+ + P     W
Sbjct: 681 KRREDAIASFEQALEIKPDYHEAWVNRGVVLGALQQ--HEEAYNSFDKAVQVQPDDGIAW 738

Query: 190 ----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
               +  AV+++Y        A+T   +  +   E ++        +            +
Sbjct: 739 FNRGLALAVLERY------EEAVTSFEKAIELKPESHK----AWTYKGNMLLKLKREQEA 788

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                ++L +  +   A    A     Q +   +   LEK   +NP
Sbjct: 789 LESYDQALAIQPDYAPAFYQKAIGYAHQRQAHFSIDNLEKAIALNP 834


>gi|302415725|ref|XP_003005694.1| superkiller protein [Verticillium albo-atrum VaMs.102]
 gi|261355110|gb|EEY17538.1| superkiller protein [Verticillium albo-atrum VaMs.102]
          Length = 1415

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 47/170 (27%), Gaps = 26/170 (15%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA-------LDISPDAP 188
           +  A    E +L    +   A+  +        D + A  +  +A       L I  +A 
Sbjct: 434 HTEAKSLFEGVLAHDPSSTAALIGIGLIYEEEEDYDDAVDFLERAVGRDPSNLRIKTEAA 493

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLE---------NA 237
           WV         L  ++  A   L         K       + L    L           A
Sbjct: 494 WV-------KALKGDYELARAELEASLPLIEKKGQTSKELLALTQYRLGSCIWNLDTSKA 546

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKI 286
            +     +Y   +++LK   N   A              K++A    +K 
Sbjct: 547 ARKSRTGAYAYFLDALKNDLNLAPAYTSLGVYYAEYAKDKKRARRCFQKA 596



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 94/313 (30%), Gaps = 39/313 (12%)

Query: 112  QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE----MMLQIPATREFAVYSLYFESCRI 167
            ++ T  N   V +LE    + E  Y +           + +    R +     Y ++   
Sbjct: 1105 RERTRDNAPAVAVLEKICGVLETDYELTESAQSLARFALARTDLARLYLAAGSYEQAIEC 1164

Query: 168  GDLNSAQRYATKALDI----SPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222
            GDL           ++       A       V      +++ + ++         +   N
Sbjct: 1165 GDLAIQLSSDESDNELTMDERKKARLSAHLTVGLAQYYSQDMAESLRCFEAALSESD--N 1222

Query: 223  RNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A+ L+A+ L  A + D       A+ E ++   + + A +      +  + +   E 
Sbjct: 1223 NPDAVCLLAQVLWAAGREDSRERARSALFEVIEAHPDHVPAVLLLGVIALLDDDEESVEA 1282

Query: 282  I------LEKIWKVNP--HPEIANIYT-------HLLSENTVGKLKRALRLEEINKESVE 326
            +      L    KV P  H ++  + +           E     L +A     +      
Sbjct: 1283 VVAELQGLRTSDKVQPSEHSQLGAVLSAIAALGADAAEEEGGEVLTQAQTDIMLYPHLPH 1342

Query: 327  SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY------ 380
                 S++A   G    A     +A+K  P +      A + +A +              
Sbjct: 1343 GW---SRLADAGGDDYAADTALQVALKAVPPRGTLEA-ADLARAYAGTGKAADAQIAIHL 1398

Query: 381  --WTQSALHAMPD 391
              W +    A+ D
Sbjct: 1399 APWAREGWTALRD 1411


>gi|241762153|ref|ZP_04760236.1| Thioredoxin domain protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373403|gb|EER63003.1| Thioredoxin domain protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 304

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 7/155 (4%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMAS 263
            +A+  L  +   A E      I  I  +  +  D  D   +     ++  L        
Sbjct: 108 KQALDQLLTQLPIAAEAAGEEDIEQILEAGNKALDDSDAEQAVTLLGQAYDLKPEEAAVV 167

Query: 264 ICAAKSLISQNKKRKAEVILEKI---WKVNP--HPEIANIYTHLLSEN-TVGKLKRALRL 317
              A++LI     +KAE +L  +    K  P  H   A +     +++  + +L+     
Sbjct: 168 GAYARALILAGDIKKAEALLSALPEDMKDKPEIHRAEAALSLAKQADSVNLDQLENLRAK 227

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            E   +  E+   ++   + +G+ D A  + +  +
Sbjct: 228 VENYPDDDEARFALACDLIAVGNRDGAADQLLAIL 262


>gi|198283711|ref|YP_002220032.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198248232|gb|ACH83825.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 255

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A  Y  L   +     L RAL L         +L++++++    G  D A A   + + 
Sbjct: 146 LAQAYAGLKDLSAARDALDRALYLV---PNYPPALLMLAELDYNDGKADAAFAHLQVVLA 202

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             P     LLLA    A    T +     Q  + A P
Sbjct: 203 QEPDNADALLLAGRIAALQGRTTQAQSLWQRCVTASP 239


>gi|116073900|ref|ZP_01471162.1| Glycosyl transferase, family 2:TPR repeat [Synechococcus sp.
           RS9916]
 gi|116069205|gb|EAU74957.1| Glycosyl transferase, family 2:TPR repeat [Synechococcus sp.
           RS9916]
          Length = 402

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 13/195 (6%)

Query: 163 ESCRIGDLNSAQRYA-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           E     D  +  R A  + L   P  P+    +    V + +  R I  L Q     K+ 
Sbjct: 174 ELLAGSDKAARLRDAMEQWLQAHPGDPYACAKLGALEVASGQRERGINLLQQGLAALKDA 233

Query: 222 -----NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                 R   +L +A +  + D    I +Y  A++       S+ A +  A  L+  ++ 
Sbjct: 234 GERAAERYELLLHLAIAQRDQDPAQAITTYRQALDLPVEARLSLGARLNLATLLMEADQL 293

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331
            +A  +          PE+A  + +L        +    ++      + + +  E+   +
Sbjct: 294 DEAIRLTTIA--TEEAPEVALGWYNLGLMQRRKGDIAAAIRAYAAALDRHPDHPETHQNL 351

Query: 332 SKIALEMGSIDQAHA 346
           +   L  G ID A  
Sbjct: 352 AVALLLGGDIDGARK 366


>gi|94971113|ref|YP_593161.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94553163|gb|ABF43087.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 1110

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 11/170 (6%)

Query: 99  NIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           N+P A++     ++           V LLE + A     +  A +KL+ +     TR+  
Sbjct: 575 NMPAAQQEAKRAAELAQGGKLPPEFVTLLEARSAELNNDWKTAIQKLDALFTF--TRDNL 632

Query: 157 VYSLYFE-SCRIGDL--NSAQRYATKALDISPDAPWV--TEAVVQQYVLAKEWSRAITFL 211
            Y L    +  +G    ++ +  A  +   +P         A  + Y     ++  I   
Sbjct: 633 QYGLMLSNAQTLGAQPSDALKTIARLSKLKAPAGTDPRIQIAAAETYAAMGNYTAEIQSA 692

Query: 212 NQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            +  ++A+   W   +A   +         GD   +      +  +  + 
Sbjct: 693 ERAVRDAQARSWRMMQAKASLQLCWAYQRNGDSAKALASCDTARTVFADF 742


>gi|83721418|ref|YP_443704.1| TPR domain-containing protein [Burkholderia thailandensis E264]
 gi|83655243|gb|ABC39306.1| TPR domain protein [Burkholderia thailandensis E264]
          Length = 781

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 6/144 (4%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFES 164
            S         ++ +  +L V +    ++   A  +   ++++      A     L   +
Sbjct: 235 ASASRALELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHA 294

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R      A     +A++++P+A      +    +       AI  L +  +     +  
Sbjct: 295 QRR--YEEAVAACRRAVELAPNAAPANGTLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVT 352

Query: 225 RAILLIARSLENADKGDMIASYHD 248
            + +L   +L + D  D      +
Sbjct: 353 HSAMLF--ALVHDDAVDPAQLLEE 374


>gi|321476570|gb|EFX87530.1| hypothetical protein DAPPUDRAFT_311979 [Daphnia pulex]
          Length = 622

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 7/110 (6%)

Query: 180 ALDISPDA---PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A  + P     P V   +     L+ ++ +A        +       N ++L        
Sbjct: 465 AARLQPSQDLDPDVQTGLGVLLNLSGDFDKAPDCFRAALQMKP----NDSLLWNRLGATL 520

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           A+ G    +     ++L+L    I A    A S I+    R+A   L   
Sbjct: 521 ANGGKSEEAIESYYKALELSPGFIRARYNLAVSCINLGAHREAAEHLVSA 570


>gi|161506152|ref|YP_001573264.1| lipoprotein NlpI [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160867499|gb|ABX24122.1| hypothetical protein SARI_04343 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 294

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 19/218 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIM 261
           +  A    +   +    +N       + R +     G    +  D +   +   N     
Sbjct: 112 FDAAYEAFDSVLELDPTYN----YAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 167

Query: 262 ASICAAKSLISQNKKRKAEVI-LEKI----WKVNPHPEIANIYTHLLSENTV-GKLKR-A 314
             +  A+  +++ + ++A     EK     W  N    I   +   +SE T+  +LK  A
Sbjct: 168 LWLYLAEQKLNEKQAKEALKQRFEKADKEQWGWN----IVEFFLGDISEATLMDRLKADA 223

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                + +   E+   + K  L +G +D A A   LA+
Sbjct: 224 TDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAV 261


>gi|33865523|ref|NP_897082.1| hypothetical protein SYNW0989 [Synechococcus sp. WH 8102]
 gi|33632692|emb|CAE07504.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 572

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 53/213 (24%), Gaps = 19/213 (8%)

Query: 63  RFFLSCPAMLF---HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
           R     P            +      +    GL ++   +   A +      Q    H  
Sbjct: 355 RTLTQIPGWKRIGERHCRLKLSSNADQGFAKGLKALQGGHWSAATEHLQAAIQNEPDHAP 414

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL----------YFESCRIGD 169
              +L     A  + Q   A        Q+          L               R G+
Sbjct: 415 AHTFL--GVCAEKQGQSEQASRAFRTAHQLDPLALRPRRGLERPHQRTFAAARLLERRGN 472

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +A+R+    LD  P        +           +A   L +      +         
Sbjct: 473 SAAAERHYRAILDQLPSHNGALLQLATLLQRQGNSEQAAFCLERLLHAHPD----HVHGH 528

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             +S+  + +G    +    + +L +  + + A
Sbjct: 529 TNQSILLSRQGQWPEAQAACLRALAIDPSFLPA 561


>gi|67923943|ref|ZP_00517398.1| TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854211|gb|EAM49515.1| TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 656

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 86/244 (35%), Gaps = 14/244 (5%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREF-AVYSLYFESCRIGDLNSAQRY 176
            YL   ++    + Y  A E    +++     P + E      L +   +     +A   
Sbjct: 391 AYLQRGKLYQQAKNYQGAIEDFSSLIKLQPNSPESVEVYGRRGLSYAQLKN--YPAAIED 448

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
            +  +   P          + Y+  K++++A+   NQ    A         +  AR+  +
Sbjct: 449 FSSLIKSQPKNHQGYTYRCRVYIELKDYNQAMKDCNQAVAIAPNNPE----VYFARAGVH 504

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE 294
           +   +  A+  DA + +++  +  +          +QN   KA    E     N    P 
Sbjct: 505 SGLKNYSAAIKDADKIIEIAPDFPVGYWVRGAMYFAQNNPSKALSDYELALSKNDKFAPA 564

Query: 295 IAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           I++  Y      +    ++   +   I  +   + + ++    + G  ++A + A  A+K
Sbjct: 565 ISSIAYVKYKQGDKQKAIELWQKALTIQDDLTGTKLALAVALYQEGQPEKALSLAKEAIK 624

Query: 354 IAPR 357
           I  R
Sbjct: 625 IDER 628


>gi|326489833|dbj|BAJ93990.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326494606|dbj|BAJ94422.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 719

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 83/281 (29%), Gaps = 29/281 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--IAHEKLE-MMLQIPATRE 154
             +  AR+++          +E    L        E+      A    +  + ++P  R 
Sbjct: 252 GEVERARRVYERA-ADLLVDDEDAEVLFVAFAEFEEKCREVERARAIYKYALDRVPKGRA 310

Query: 155 FAVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
             +Y  +    +  GD            +      +  +P         ++         
Sbjct: 311 EDLYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKD 370

Query: 206 RAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD-- 257
           R      +   N       R       L I  +L E  D  DM  +     E LKL    
Sbjct: 371 RIRDVYERSIANVPPAEEKRYWQRYIYLWINYALYEELDAQDMERTREVYRECLKLIPHK 430

Query: 258 --NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
                   + AA+  I Q   + A  IL     + P  +I   Y  +  E  +G   R  
Sbjct: 431 KFTFAKLWLMAAQFEIRQKNIKAARQILGNAIGMAPKGKIFKKYIEI--ELYLGNFDRCR 488

Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            L     E +  +  +    +++   +   D+A +   LA+
Sbjct: 489 TLYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAI 529


>gi|315185627|gb|EFU19395.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 304

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 18/223 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +L               E  R    +++     K L + P  P +   + + Y    E
Sbjct: 78  HALLLNAYANFMLGMGEIEEEQRQEFFDASIVAFRKLLILRPLTPEIAYMLGKAYFHKGE 137

Query: 204 WSRAITF--LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
           +   ++   L+       E     A LL    L  A +GD   S    + +     +S +
Sbjct: 138 FYADLSSYYLDYALAKGYEA----ADLLEYLGLSAAREGDYSKSSEFFLRAKDQGKDSPL 193

Query: 262 ASICAAKSLISQNKKRKAEVIL-------EKIWKVNPHPEIANI-YTHLLSENTVGKLKR 313
             +  A+SLI      +A  +L        + ++V     +  + Y     E+    L  
Sbjct: 194 LDLALARSLIELGDYDRAHDLLSPLAEQSNREYQVEALLLLGELHYRAQRYEDARDYL-- 251

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             +L +I  ES E+   + +IA   G   +A +    A++I P
Sbjct: 252 -EKLVQIQ-ESAEAYFYLGEIASHAGDQIKARSFWRKALQINP 292



 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 73  FHMLHKRNYDKGYK------ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126
                 R  D+G        AL   L+ +   +   A  + S +++Q     +    LL 
Sbjct: 177 SSEFFLRAKDQGKDSPLLDLALARSLIEL--GDYDRAHDLLSPLAEQSNREYQVEALLLL 234

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            ++    ++Y  A + LE ++QI  + E   Y L   +   GD   A+ +  KAL I+P+
Sbjct: 235 GELHYRAQRYEDARDYLEKLVQIQESAEAYFY-LGEIASHAGDQIKARSFWRKALQINPN 293

Query: 187 A 187
            
Sbjct: 294 H 294


>gi|294673477|ref|YP_003574093.1| hypothetical protein PRU_0734 [Prevotella ruminicola 23]
 gi|294473988|gb|ADE83377.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
          Length = 217

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 4/151 (2%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           Y  A ++   +L+       A+Y   F   ++   + A+      L I P+       + 
Sbjct: 53  YEYARDEYSAVLKKDEKNLAALYFRAFCQTQLRQYSFARADYEAFLAIQPEHLEARLGLA 112

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
               L    + A   LN+  +   +     A    AR+     +    A+ +D  E+L+L
Sbjct: 113 HVLQLLGRKTDAADELNRAVQMFPDSTDAYA----ARAAFETQQEQYDAALYDWDEALRL 168

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              +   +      L+   +K++A   L++ 
Sbjct: 169 APKNAELTASKVDVLLRLGRKKEAREALDQA 199


>gi|226227461|ref|YP_002761567.1| hypothetical protein GAU_2055 [Gemmatimonas aurantiaca T-27]
 gi|226090652|dbj|BAH39097.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 496

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 55/176 (31%), Gaps = 10/176 (5%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
              +   A E +E  + +       + SL       GD   A+    + L + P      
Sbjct: 324 MAGRRGQAVEAMERAVALEPDIALFLSSLGAARLAAGDSRGAEDALRRTLLLEPRHRAAR 383

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLE---NADKGDMIA 244
           E +V         + A+    Q   +     R RA L       R+L     A++ D I 
Sbjct: 384 ERLVHLLEDEGRLADAVGVREQA-PDLPNAERFRAALSEGDASYRALVRALLAEEIDRIE 442

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               + E+  + +      +   +        R+A     +       P +A+ +T
Sbjct: 443 QRVRSSEAPTVEERFAPPIVRLVQLFGRIGDARRAHSWTLQAKAAR--PALAHWFT 496


>gi|254385770|ref|ZP_05001091.1| secreted protein [Streptomyces sp. Mg1]
 gi|194344636|gb|EDX25602.1| secreted protein [Streptomyces sp. Mg1]
          Length = 470

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 75/271 (27%), Gaps = 19/271 (7%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHEKLEMM------L 147
              +   A+K    + Q H+         L  +   +   R      + +  M       
Sbjct: 143 GLGDYKAAQKALERLEQLHSG--------LAARIRASQVYRDRGWREDAVLAMEHAGGAA 194

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           + P  + + ++ L   +   G+   A      AL   P  P       +          A
Sbjct: 195 KSPTEKAYVLFRLGELAWERGETAEALGLYEGALRTDPGRPEALGGRARALAALGRGGEA 254

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +         A        +  +  SL  AD+          + + +   + +   +   
Sbjct: 255 VRDYRMALGRAPVPRLELELGELLESLGRADEARAPYDVLRTLTA-RGAADGVNEEVVLG 313

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSENTVGKLKRALRLEEINKESV 325
                      A   L   W  + + ++A+   +    + +    L+ A +  +    + 
Sbjct: 314 LFEADHADPAAAVRRLSTEWARHKNVQVADALGWALHRNGDDASALEYAKKATDSGMRNA 373

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           E     + I   +G    A      AM+  P
Sbjct: 374 EFSYHRAVIERGLGDEAGARRHLQEAMRTNP 404


>gi|190890585|ref|YP_001977127.1| hypothetical protein RHECIAT_CH0000964 [Rhizobium etli CIAT 652]
 gi|190695864|gb|ACE89949.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 611

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 81/253 (32%), Gaps = 58/253 (22%)

Query: 80  NYDKGYKALYTGLMS-------IAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQ 128
                 + L +  ++       +A  N   A K  +   +  TF  + +       L  +
Sbjct: 2   RQRLAIRLLTSAALAAVLSLGGVAGVNAEDAAKTAADAGKTETFDADSVTTFSGAFLAAR 61

Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  +  Y  A E  +  LQ     P  R      L       GD+    +YA   L   
Sbjct: 62  TADVDHDYETAIELYKKALQIEPGNPEIR----QRLMISLLLNGDIKEGVKYAND-LKGD 116

Query: 185 PDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIAR--------SLE 235
           P    +T  V     + + ++  A + L  K  N  +   N  +L  AR        +L 
Sbjct: 117 PSVERITTIVRGMDAVRRDDYKTAESILKYKGPNDLDRMMNDLLLAWARVGAGRGKEALA 176

Query: 236 NADK----------------------GDMIASYHDAIESL------KLCDNSIMASICA- 266
             +K                      GD+ ++     +++          ++ M ++ A 
Sbjct: 177 MVEKMKGPDWVRIFQNYNAGAIAVVTGDVKSARQHLNDAVLDKEGGATAPDTFMRAVMAL 236

Query: 267 AKSLISQNKKRKA 279
           A+   SQ  K+KA
Sbjct: 237 ARLEASQGNKQKA 249


>gi|1709655|sp|P30427|PLEC_RAT RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName: Full=Plectin-1
 gi|1561642|emb|CAA42169.1| plectin [Rattus norvegicus]
          Length = 4687

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L +L +   A  + +           M      R   +   
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1602

Query: 161  YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214
              E  R G  +  Q     A +A      A    E +   VQ     K  + A   L  K
Sbjct: 1603 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1662

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
             +      + RA+  +      A++ +      +A  +
Sbjct: 1663 AEAEAAREKQRALQALDELKLQAEEAERWLCQAEAERA 1700


>gi|114987|sp|P17885|BIMA_EMENI RecName: Full=Protein bimA
 gi|2335|emb|CAA41959.1| bimA [Emericella nidulans]
          Length = 806

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 63/196 (32%), Gaps = 7/196 (3%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D + A +   +A  + P   +       +YV  +E+ +A+       ++    +      
Sbjct: 596 DHDQALKCFKRATQLDPHFAYGFTLQGHEYVANEEYDKALD----AYRSGINADSRHYNA 651

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                      G +  +      + K+  ++ +   C    L   N  + A +   +   
Sbjct: 652 WYGLGTVYDKMGKLDFAEQHFRNAAKINPSNAVLICCIGLVLEKMNNPKSALIQYNRACT 711

Query: 289 VNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           + PH  +A        +  ++    L     L+++  +      ++ K+   +     A 
Sbjct: 712 LAPHSVLARFRKARALMKLQDLKSALTELKVLKDMAPDEANVHYLLGKLYKMLRDKGNAI 771

Query: 346 AKAMLAMKIAPRKEIF 361
                A+ + P+   +
Sbjct: 772 KHFTTALNLDPKAAQY 787


>gi|237730083|ref|ZP_04560564.1| lipoprotein NlpI [Citrobacter sp. 30_2]
 gi|226908689|gb|EEH94607.1| lipoprotein NlpI [Citrobacter sp. 30_2]
          Length = 294

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 19/218 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIM 261
           +  A    +   +    +N       + R +     G    +  D +   +   N     
Sbjct: 112 FDAAYEAFDSVLELDPTYN----YAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 167

Query: 262 ASICAAKSLISQNKKRKA-----EVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKR-A 314
             +  A+  + + + ++A     E   ++ W  N    I   Y   +SE T+  +LK  A
Sbjct: 168 LWLYLAEQKLDEKQAKEALKQRFEKSDKEQWGWN----IVEFYLGNISEATLMERLKADA 223

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                + +   E+   + K  L +G +D A A   LA+
Sbjct: 224 TDNTSLAEHLSETNFYLGKYYLSLGDLDNATALFKLAV 261


>gi|226361519|ref|YP_002779297.1| LuxR family transcriptional regulator [Rhodococcus opacus B4]
 gi|226240004|dbj|BAH50352.1| putative LuxR family transcriptional regulator [Rhodococcus opacus
           B4]
          Length = 903

 Score = 38.8 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 77/267 (28%), Gaps = 51/267 (19%)

Query: 132 AERQYNIAHEKLEMM-----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184
           A  +   A    + +     L   + R          +    D  SA++    A+  +  
Sbjct: 518 ATGRIAEARAAYDTLSAKIALGAQSQRFDMARGWLDLAL--DDPESARQELESAVPTAFR 575

Query: 185 ----PDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLENAD 238
                 + W    + +      +W+ AI  +++   +      +  R ++    +  +A 
Sbjct: 576 MGSTRISLWAQAWLARTQFALGDWNGAIATVDRAAHQLEDATLDLLRPLVHWTGAQTHAL 635

Query: 239 KGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKIWKVNP--- 291
           +G+  A++     +     +     I +S+  A+    +         LE + ++ P   
Sbjct: 636 RGNWPAAHEHLRLAAASSHDYPMMFIPSSLARAQCAEVEADYAAVIRALEPLTRLEPREG 695

Query: 292 ---------------------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
                                H + A+ +     E    +  R   +  +          
Sbjct: 696 VDEPGFWQWPDVYANALVMAGHVDDADAFLTPHEERAAERGHR-SAMARLG-------YA 747

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +IA   G ID A      A+     
Sbjct: 748 RGRIAGARGDIDTARDVFENALTQLDT 774


>gi|268601614|ref|ZP_06135781.1| predicted protein [Neisseria gonorrhoeae PID18]
 gi|268585745|gb|EEZ50421.1| predicted protein [Neisseria gonorrhoeae PID18]
          Length = 523

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 116 ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 172

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 173 RLL---LEAGRFYAEDNQNKESAAAFEKV 198


>gi|160883194|ref|ZP_02064197.1| hypothetical protein BACOVA_01163 [Bacteroides ovatus ATCC 8483]
 gi|260171918|ref|ZP_05758330.1| TPR domain-containing protein [Bacteroides sp. D2]
 gi|315920230|ref|ZP_07916470.1| TPR domain-containing protein [Bacteroides sp. D2]
 gi|156111419|gb|EDO13164.1| hypothetical protein BACOVA_01163 [Bacteroides ovatus ATCC 8483]
 gi|313694105|gb|EFS30940.1| TPR domain-containing protein [Bacteroides sp. D2]
          Length = 320

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/223 (10%), Positives = 72/223 (32%), Gaps = 42/223 (18%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +      + R+G  + A +   +AL I  +       + Q Y+   E ++A   L +  
Sbjct: 35  GLR-----AQRMGRPDYAVKCFIEALAIK-EEFETMGYLSQLYIQMGETAKARELLEKMA 88

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
               +         +  +     + D  A    A +++ + +         A +     K
Sbjct: 89  AMEPDVTS----TFLTLANVCFIQEDYQAMEEAANKAIAIEEG-------NAVAHYLLGK 137

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            RK +                        ++ +  +    +   +  + +E+ ++ ++  
Sbjct: 138 ARKGQ------------------------DDDLMTIAHLTKAITLKDDFIEARLLRAEAL 173

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDK 377
           + +             +   P +E  +LL  ++++A+  + + 
Sbjct: 174 MNLKQYKDMMEDIDAVLAQNPEEETAMLLRGKVKEADGKDEEA 216


>gi|262193562|ref|YP_003264771.1| hypothetical protein Hoch_0237 [Haliangium ochraceum DSM 14365]
 gi|262076909|gb|ACY12878.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 984

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 45/182 (24%), Gaps = 26/182 (14%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQ-----------IALAERQYNIAHEKLEMMLQ- 148
             A ++     +     +E L  +   Q                     A    E  L+ 
Sbjct: 762 HAAAQLAQAKGRARNEFDETLQQIARTQSNQVVRYVRGLAWQRSGDMREARRHFEESLEG 821

Query: 149 --IPATREFAVYS----------LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
                T      +          L       G  + A  +  +A+ ++P        + +
Sbjct: 822 VADEITELAEERANSMAYRAHAALAELDLDAGSTDKAVAHLERAVALNPAYLPAMALLGR 881

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
             V   + + A   L    +  +  N   A+ L               +   A E++   
Sbjct: 882 VQVQRGQHAEAAATLKPLLEEPEIAN--AAVELAYAEALVGGGSPSDEARGQAREAVLRA 939

Query: 257 DN 258
            +
Sbjct: 940 KD 941


>gi|145601900|ref|XP_001403258.1| hypothetical protein MGG_14443 [Magnaporthe oryzae 70-15]
 gi|145010362|gb|EDJ95018.1| hypothetical protein MGG_14443 [Magnaporthe oryzae 70-15]
          Length = 1227

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 66/244 (27%), Gaps = 41/244 (16%)

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           M          + +L  E+ R      A  Y      +        EA++      ++  
Sbjct: 1   MEHDDKALPIDIRTLGREAARCHAYAKALHYKELEF-LQDHNGGAVEALIVINNQLQQSD 59

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            AI  L + +          A+ L     E  ++ D    +++  E       S+   + 
Sbjct: 60  AAIGILRKAQSY------QDALHLKETWFEKLERWDEALEFYNKREKETPAGTSVPVEVI 113

Query: 266 AA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
               + L +  +           W       +A +     S ++    +R   L      
Sbjct: 114 MGKMRCLHALGE-----------WDT-----LAQLAGATWSNSSSELQRRFAPLATT--- 154

Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
                      A  +G  D   A      + +P +  F  +  I +      + +  W  
Sbjct: 155 ----------AAWGLGKWDSMDAYLQSMKRTSPDRSFFQAILAIHRNQFG--EAVR-WID 201

Query: 384 SALH 387
            A  
Sbjct: 202 QARE 205


>gi|115385266|ref|XP_001209180.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114196872|gb|EAU38572.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 576

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 42/153 (27%), Gaps = 16/153 (10%)

Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                     A E     L    T      + +             A+  A K   I P 
Sbjct: 337 AYEKLGDLKQAIEFYNKSLTEHRTPDALTKLRN----------AEKAKDKAEKEAYIDPA 386

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  + Q+     +W  A+    +  K A +  R        R+           + 
Sbjct: 387 KAEEARELGQKKFQEADWPGAVDAFTEMTKRAPQDPRG----YSNRAAALIKLMAFPQAV 442

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
            D  E++      I A I  +++L+   +  +A
Sbjct: 443 QDCDEAIARDPKFIRAYIRKSQALVIMKEYNRA 475


>gi|310822253|ref|YP_003954611.1| social gliding motility protein tgl [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395325|gb|ADO72784.1| Social gliding motility protein Tgl [Stigmatella aurantiaca
           DW4/3-1]
          Length = 250

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 11/135 (8%)

Query: 130 ALAERQYNIAHEKLE-MMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           A        A  + +  +   P          +          G    A     KAL++ 
Sbjct: 41  AQQAGSIQEALSEFQQAVALDPDNADARNALGI----VLHLSFGRHAEALAEYEKALELR 96

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P+       +   Y+    +  AI    Q   +        A   +  +     KGD   
Sbjct: 97  PNFSEARSNLGNVYLDQGRYDEAIRTYEQVLNDMLYPTPFIAQSNLGWA--YFKKGDTAK 154

Query: 245 SYHDAIESLKLCDNS 259
           +  +   ++ L  N 
Sbjct: 155 ALENIKSAVTLNPNF 169


>gi|299135975|ref|ZP_07029159.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8]
 gi|298602099|gb|EFI58253.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8]
          Length = 669

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 79/209 (37%), Gaps = 10/209 (4%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G++ + + +   A ++      +       L  L + Q AL   Q   A   L   L+  
Sbjct: 134 GIVLMESGDPLAASRLFESYLAEKGSSGVILTNLAKAQTAL--GQEAEAEATLWRALEAD 191

Query: 151 ATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAI 208
             +E  +   Y   +   G   +      +A D+   + W  +  + +  L   + S+A+
Sbjct: 192 PNQENGL-GWYTAMARDRGGEEAYLEAMHRAADL--PSAWRPQVWLARAALEHNDVSQAM 248

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
           TF  Q  + A        +LL + S +    G +  +      + +   + +       K
Sbjct: 249 TFYGQALERA--GRPAPLVLLQSMSGDLGQTGHLREALALTRPAYEAKTHGLAVGNNLIK 306

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           + +   +   A  ++E+++ +N HP+ A+
Sbjct: 307 ASLDLGEIGTARAMVEELYTLN-HPDWAD 334


>gi|253997852|ref|YP_003049915.1| hypothetical protein Msip34_0139 [Methylovorus sp. SIP3-4]
 gi|253984531|gb|ACT49388.1| TPR repeat-containing protein [Methylovorus sp. SIP3-4]
          Length = 640

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 37/264 (14%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +Y  A   LE +LQ+  T   + +        +G   SAQ Y  +AL+  PD       
Sbjct: 103 GRYEEALTALESVLQLRETDAASAFLAGNACMMLGHAESAQAYYQRALEYRPDYAEAYHN 162

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEW------------------------------NR 223
           +       ++W  A++F N+      ++                                
Sbjct: 163 LGIILNQRRQWQDALSFFNKAIDLKPDYLEAYTSCGNALIELGKHDFAIAHFDHVLQVQA 222

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              + L  R +          +      +L        A++  A +L++ ++  +A    
Sbjct: 223 QNPLALNGRGVALKHLRQHALALASFDAALAARPGFAEATLNRANALLALDRHEEALGAY 282

Query: 284 EKIWKVNPH-PEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
                + PH P++     N Y  L   +    L+   +  ++  ++   L   + I L  
Sbjct: 283 GAALALTPHNPQVYSNRGNAYLDLGQYDAA--LQDYDQALQLEPDNATVLWNKALICLVH 340

Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL 362
           G  DQ         +       + 
Sbjct: 341 GDFDQGWHLFEHGWEAEGPPRGYR 364


>gi|171911307|ref|ZP_02926777.1| putative general secretion pathway protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 821

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 39/151 (25%), Gaps = 36/151 (23%)

Query: 87  ALYTGLMSI---AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           AL   +            LA +  +   Q+ T   E L         + +     A  + 
Sbjct: 17  ALAPAMAGAPLPGGGAASLAERELARRMQRETEARECLTR---GDALMKDADCEAAAREY 73

Query: 144 EM----MLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           +     +   P T+      L  E+    GD  +A   A +                   
Sbjct: 74  QAAIDLLPDAPRTQA-----LREEAMARYGD--AAVCLARE------------------R 108

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
                ++ A T L    K        R +L 
Sbjct: 109 AKNGRYAEARTLLEGVLKLNSPSESARKLLA 139


>gi|149925163|ref|ZP_01913464.1| hypothetical protein PPSIR1_01669 [Plesiocystis pacifica SIR-1]
 gi|149813965|gb|EDM73609.1| hypothetical protein PPSIR1_01669 [Plesiocystis pacifica SIR-1]
          Length = 2304

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 72/279 (25%), Gaps = 49/279 (17%)

Query: 145  MMLQIPATRE-FAVYSLYFESCRI----------GDLNSAQRYATKALDISPDAPWVTEA 193
             M      R    +     E+ R           G   +      +AL        +   
Sbjct: 978  RMDARERARLYLGLAGTLDEASRAPFLRDVAGYHGAEPAIFAPLREALRKLGAFAELVAL 1037

Query: 194  VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR--------AILLIARSLENADKGDMIAS 245
            +       + W            +  E    R         +L   R+        +  +
Sbjct: 1038 LESVGAEPEHWRELAEDAAVAGADKAEGKARRCAGLGLYERLLAEERAGGGLADHTLERA 1097

Query: 246  YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
              +   + +L  + +       ++L    + R+A              E+  +   L  E
Sbjct: 1098 CVELARARELRPDDLELRYVNGRALERAGQTREALG------------ELVELVAVLDPE 1145

Query: 306  NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK------- 358
                  K      E+   +    ++    ALE G   +A     LA +  P         
Sbjct: 1146 RDGESRKGLPTAVELGPLARRCGLL----ALEAGESPRAAQLLDLAYRTPPEAGGLRDAR 1201

Query: 359  -------EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
                    +F LLA + +  + + +    WT  AL    
Sbjct: 1202 ARLAVAERLFTLLADLSRDANADAEAQQAWTAQALELAR 1240



 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 111/330 (33%), Gaps = 57/330 (17%)

Query: 91   GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
            GL+++ A   P A    + +             L + +      +  +A     ++  + 
Sbjct: 1168 GLLALEAGESPRA----AQLLDLAYRTPPEAGGLRDARA-----RLAVAERLFTLLADLS 1218

Query: 151  ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRA 207
                              D  + Q +  +AL+++  A  + EA  +      +W     A
Sbjct: 1219 R-------------DANADAEAQQAWTAQALELARRAAVMAEA--EGAREGGDWGDGDAA 1263

Query: 208  ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            + +L +  + A++ +    +   A  L   D+  +  +Y  ++ +L   +     ++   
Sbjct: 1264 LRWLERAARLAEDEHERATLYARALELAPEDE-RIADAYEASLRALDDGERLE--ALLRK 1320

Query: 268  KSLI--SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT------------------ 307
            +  +      + +   ++E++  + P   +AN      +E                    
Sbjct: 1321 RIAVGLDGGDRARTVGLVERLLGMLPMLALANDEREGEAEAEGEDEAKAKGPSEAEVSAR 1380

Query: 308  -VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--- 363
               + +    L  +  E +E  + ++ + +  G  + A +      +  P  +   L   
Sbjct: 1381 MRERAELLEHLLRLAPERLEPRLELADLRMLEGDREAAASHWRSLAQRLPTGDRRFLEPA 1440

Query: 364  --LAQIEQANSHNTDKILYWTQSALHAMPD 391
              LA+I   ++   ++   W + A+   PD
Sbjct: 1441 RQLARI-ALDNDELERARGWLERAMAIEPD 1469


>gi|302878310|ref|YP_003846874.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302581099|gb|ADL55110.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
          Length = 963

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 17/198 (8%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G L  AQ    +AL I+P+   V   +          + A     +  +   ++      
Sbjct: 294 GVLQEAQASYRRALAINPNLFQVHSNLGNVQRAQGLLTEAEASYRRALELCPDYVE---- 349

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L    +   D+G +  S     ++L +  +   A       L S  +  +A   L +  
Sbjct: 350 ALCNLGITLQDRGQLAESESCYRQALVIRPDYAQAYSNLGVVLQSLGRADEAAASLIQA- 408

Query: 288 KVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            V  HP+ A+ + +L           +      RA    +I  E  ++   +    L  G
Sbjct: 409 -VQLHPDRADAHNNLGHTLHGMGRLADAADCYLRA---LQIQPEFAQAYSNLGFTRLVQG 464

Query: 340 SIDQAHAKAMLAMKIAPR 357
            +D+A A    A+KI  R
Sbjct: 465 RLDEARAALNCALKINDR 482


>gi|255073513|ref|XP_002500431.1| kinesin-like protein [Micromonas sp. RCC299]
 gi|226515694|gb|ACO61689.1| kinesin-like protein [Micromonas sp. RCC299]
          Length = 1309

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 51/155 (32%), Gaps = 9/155 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A +  +  + + +           VQ A  ER   +A  +      I   R     +
Sbjct: 661 AAKAERDEAVAAARASKDK-------AVQAAQEERDEEVAKARSARDRAIDEMRMEKEKA 713

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           ++ E+ +  D   A   A KA   +       +  V +    K+ + A     + +   +
Sbjct: 714 VF-EARKEKDEAVALANAEKAERTAY-LENDRDTRVAKAEKDKDEAIAKALRERDEAVTE 771

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              R+   +  A+  ++A   +       A E LK
Sbjct: 772 AKRRSSEAIAAAQEDKDAAIAEAHRLRDLAQERLK 806


>gi|254516102|ref|ZP_05128162.1| sulfotransferase [gamma proteobacterium NOR5-3]
 gi|219675824|gb|EED32190.1| sulfotransferase [gamma proteobacterium NOR5-3]
          Length = 662

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 64/171 (37%), Gaps = 19/171 (11%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           ++ ++ A  +L +      +  R     L  ++    D G+  A+     E+L+     +
Sbjct: 56  SRSFTAAQEYLGKLLAREPDNGRG----LQEQAHLYRDTGNTTAAIDAYGEALRANPALV 111

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVN----PHPEIANIYTHLLSENTVGKLKRALR 316
             +    +  + ++  R+AE              P P +A             ++ +A +
Sbjct: 112 --ACYRQRLALLRSAGREAEANTTAAQLHRVEQLPKPLLAVTDLLAQG-----RILKAEQ 164

Query: 317 LEEI----NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           L         +  E + ++++I   +G++++AH     A +I P   I  +
Sbjct: 165 LCRQFLLQAPQHTEGMRLLAEIGSRLGALEEAHFLLQSACEINPSDPILRI 215


>gi|154493825|ref|ZP_02033145.1| hypothetical protein PARMER_03168 [Parabacteroides merdae ATCC
           43184]
 gi|154086438|gb|EDN85483.1| hypothetical protein PARMER_03168 [Parabacteroides merdae ATCC
           43184]
          Length = 321

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E   + A  L+ ++       D + +  D  +++ L ++   A +  A+ L+S  +  +A
Sbjct: 126 EETNHLAWFLMGKAKRT--TSDPLGAIADLTKAIALKEDFTDAYLMRARILLSMQQATEA 183

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIA 335
              +EK   + P  E + +         +G +  A      + E+N  + E+ ++V ++ 
Sbjct: 184 LPDVEKAITLAPEEETSYL-LRGRIHEAMGNIDAAAADYQNVLELNPFNDEATLLVGQLL 242

Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357
           +    +D+A      A+ + P 
Sbjct: 243 ITQERLDEAITFFNEAIDLKPD 264



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 11/136 (8%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           + L   Q   A      A      +     T    +     E+   G++++A       L
Sbjct: 173 ILLSMQQATEALPDVEKAIT----LAPEEETSYL-LRGRIHEAM--GNIDAAAADYQNVL 225

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           +++P     T  V Q  +  +    AITF N+      ++ +  A     R      KGD
Sbjct: 226 ELNPFNDEATLLVGQLLITQERLDEAITFFNEAIDLKPDFGKAYA----ERGRAKNLKGD 281

Query: 242 MIASYHDAIESLKLCD 257
              ++ D  +S++L  
Sbjct: 282 KDGAFEDLKKSIELNP 297


>gi|119925243|ref|XP_584693.3| PREDICTED: tetratricopeptide repeat, ankyrin repeat and coiled-coil
            containing 1, partial [Bos taurus]
          Length = 1621

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 131  LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             A ++Y  A  K       E M      R     +L     +  D   A+ +A+KAL++ 
Sbjct: 1080 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1139

Query: 185  PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            P +     A  +    ++++  A+  L +  K        R +L 
Sbjct: 1140 PKSYEAFYARARAKRSSRQFVAALADLREAVKLCPANQEIRRLLA 1184


>gi|73542251|ref|YP_296771.1| hypothetical protein Reut_A2566 [Ralstonia eutropha JMP134]
 gi|72119664|gb|AAZ61927.1| TPR repeat [Ralstonia eutropha JMP134]
          Length = 407

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 6/140 (4%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +   P      RE A+Y L  +  R G L+ A+    + L   P A  
Sbjct: 84  GETERAIRVHQNLATRPDLPEPEREHALYELGQDFLRAGLLDRAEESLRR-LMSGPYAAS 142

Query: 190 VTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +++ Y + KEW +AI      +    K++    A      + +   +     +   
Sbjct: 143 AKRVLLELYEVEKEWQKAIDAARELQALENKDYRLQIAQFCCELAQDALQRKRPEDAVKW 202

Query: 249 AIESLKLCDNSIMASICAAK 268
             ++++    ++ A I    
Sbjct: 203 LNQAVQENPANVRAPILLGD 222


>gi|330809924|ref|YP_004354386.1| hypothetical protein PSEBR_a3075 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378032|gb|AEA69382.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 352

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 21/168 (12%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           AI    Q  ++        A      +  +    ++  +     ++L+L  +++ A +  
Sbjct: 161 AIDTWEQVLEDGP----KTAETHYQLARLHLHNAELKKAQQALEQALRLQPDNLPALVMQ 216

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT----------HLLSENTVGKLKRALR 316
            + L  Q +   A ++L +  +  P    A+ Y           H  +E  V  L +A+ 
Sbjct: 217 IEVLDKQGQSEAARLLLARQLQTQP----ASAYLQHALGMWLLQHGQNEYAVLGLAKAVE 272

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           LE    E+      ++        ++ A  +    ++  P      +L
Sbjct: 273 LE---PENRHYRYDLATTLHAEQEVEAALKQLQEIVQRYPADRKARVL 317



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT-DKILY 380
            ++ E+   ++++ L    + +A      A+++ P     L++ QIE  +     +    
Sbjct: 173 PKTAETHYQLARLHLHNAELKKAQQALEQALRLQPDNLPALVM-QIEVLDKQGQSEAARL 231

Query: 381 WTQS 384
               
Sbjct: 232 LLAR 235


>gi|167031784|ref|YP_001667015.1| TPR repeat-containing protein [Pseudomonas putida GB-1]
 gi|166858272|gb|ABY96679.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas putida GB-1]
          Length = 573

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 82/264 (31%), Gaps = 11/264 (4%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-DISPDAPWVT 191
            + ++ A   L+ +++  +  + A  +L        D   A R    AL    PD     
Sbjct: 299 NKDWDEAEGYLQELIERESNVDAAHLNLGRIREERHDPAGALR--EYALVGPGPDYLPAQ 356

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                  +     S A   L + +K   ++      L +  S   ++      +     +
Sbjct: 357 LRQADILIANGRSSEASRLLAEARKAQPDYAIQ---LYLIESESYSNNNKDAQASQVLQQ 413

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +++   + +      A     ++   + E  L  I    P   +A         +   + 
Sbjct: 414 AIQRYPDDLNLLYTRAMLAEKRDDLAQMEKDLRAIIAREPENAMALNALGYTLADRTTRY 473

Query: 312 KRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
             A  L     ++  +    L  +  ++  +G++D A      A    P  E+   L ++
Sbjct: 474 TEAKALIDKAHQLTPDDPAVLDSLGWVSYRLGNLDAAETYLRQAFASFPDHEVAAHLGEV 533

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
             AN    +    W      A  D
Sbjct: 534 LWANGKRREARQVW-AKGFEAQAD 556


>gi|47124915|gb|AAH70700.1| LOC431836 protein [Xenopus laevis]
          Length = 505

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 58/179 (32%), Gaps = 19/179 (10%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A + + A+T  +    +    N    +    R+      G   ++  D   +++L  + 
Sbjct: 59  AAGQLAEALTHYHAAV-DGDPNNY---LTYYKRAAVYLAMGKFRSALPDLSRAIQLKPDF 114

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---------NTVGK 310
           + A +     L+ Q   ++A      + + +P+ E A      + E             +
Sbjct: 115 LAARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQLERVQEVERNVGGASEAYER 174

Query: 311 ------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 +    ++ E +     +  + ++  L++G +  A        K+        L
Sbjct: 175 RDYYGAIALLEKVIEFSPWDPSARELRAECYLQVGELSNAVQDLKPTTKLRNDNRAAFL 233


>gi|91787668|ref|YP_548620.1| hypothetical protein Bpro_1786 [Polaromonas sp. JS666]
 gi|91696893|gb|ABE43722.1| Tetratricopeptide region [Polaromonas sp. JS666]
          Length = 381

 Score = 38.8 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 8/180 (4%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +Y  A    E ++         R+ A ++L  +  + G L+ A   A + L+ +P    
Sbjct: 85  GEYERAVRVHEHLMSRGDLTQPERDRAQHALALDFLKAGLLDRA-EIALRKLEGTPFEEE 143

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y  +++W+ A     +    +   ++  +A  L  ++  +   GD   +   
Sbjct: 144 ARLALLSIYERSRDWANATDIAARLDSSSHGNFSTRQAHYLCEQASASTAAGDTARALSA 203

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306
             E+  +   S    I  AK      + + A   L K+ K  P   P  A +  ++   +
Sbjct: 204 LHEAAAMAPASARPLIDLAKLQNQLGQPQDAMQTLLKLEKTAPQGLPLAAGLLANIAQGS 263


>gi|83645408|ref|YP_433843.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83633451|gb|ABC29418.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 197

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 11/138 (7%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +   AL   Q  +A    + ++          ++L   + + GDL SA+ +  +ALD++P
Sbjct: 51  QALTALNNNQVALAENLFKQVIADKPGLSAPYFNLGVIAEKQGDLPSAKTWYGQALDVNP 110

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDM 242
                   +        ++  A+ F  +  +   N   ++RN AIL           GD 
Sbjct: 111 KDARALNQLAVLAREEGDFENALAFYERALQAEPNEPVYHRNIAILYDMYL------GDY 164

Query: 243 IASYHDAI--ESLKLCDN 258
           + +       + L+   +
Sbjct: 165 VRALEHYQRCQELRSAPD 182


>gi|78062900|ref|YP_372808.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77970785|gb|ABB12164.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 292

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 13/205 (6%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++    L     ALA    ++A    E +L        A   L   + R GDL  A+   
Sbjct: 38  DDPQAELRIADSALAGGNVDLASTLYEKVLAKHPDSLAARLGLGDVNYRAGDLERARILY 97

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +A   +P        + +  +  +    A     Q+ ++      N  +          
Sbjct: 98  DEAQRQAPAELGPRLGLARVALRQRRLDEA----AQRYRDLLAAQPNHPLAAEGLGTVLD 153

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-------EKIWKVN 290
            +G    +     ++L+   ++    +    SL+  N+ R+   +L          W+  
Sbjct: 154 LQGRHADAQVVYRDALRAHPDAQGLRVDLGLSLVLSNRPREGVNVLLDVAGLPSAPWQAR 213

Query: 291 PHPEIANIYTHLLSENTVGKLKRAL 315
               +A  Y  L + ++  KL  A 
Sbjct: 214 Q--NLAFAYGVLGNTDSAKKLLSAE 236


>gi|71906809|ref|YP_284396.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71846430|gb|AAZ45926.1| TPR repeat [Dechloromonas aromatica RCB]
          Length = 472

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 8/144 (5%)

Query: 134 RQYNIAHEKLEM-MLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
                +       + + P   E  A   L  E    G    A+    +AL+++P    + 
Sbjct: 22  GDVEKSERAFRAAIAEAPELGEAHANLGLLLE--SDGRTQEAEASYRRALELAPGLSQIH 79

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +       + ++ A     +      E     + L +  +    +      S      
Sbjct: 80  INLGAMLASQRRFAEAENTYREALAVNPESYMAWSNLGVLLACVKREA----ESEQCYRT 135

Query: 252 SLKLCDNSIMASICAAKSLISQNK 275
           ++ L  +   AS   A  L+ Q +
Sbjct: 136 AMALAPDYRNASFNLAYLLLRQGR 159


>gi|296123125|ref|YP_003630903.1| hypothetical protein Plim_2882 [Planctomyces limnophilus DSM 3776]
 gi|296015465|gb|ADG68704.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
           DSM 3776]
          Length = 767

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 11/196 (5%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             L ++            N+  ++L +   A    +   A +    + Q       A + 
Sbjct: 69  SRLTKRPTKTAKPSAKPVNDSALWLEQAAQAEIGGRLKEAQDLYAKVCQAEPGHVLAWHR 128

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L   + ++ D  +A  +  +AL ++PD   +             + +A   + +  K   
Sbjct: 129 LAVVTTQLDDFPTAWSHYQEALKLAPDNADIWSDAGYCLFRQGSYEQAEKHVREAMKQHP 188

Query: 220 EWNRNRAILLIAR--------SLENADKG-DMIASYHDAIESLKLCDNSIMASICAAKSL 270
           + +R    L + R        +L    K  D   S     +  +L  +   A+  +A+  
Sbjct: 189 DESRYINNLALIRGVQGHADEALGLFKKCHDEATSLEFMAQIHELRKD--PAAAKSARDQ 246

Query: 271 ISQNKKRKAEVILEKI 286
               + +K    L   
Sbjct: 247 AQVARAKKTSQTLAAT 262


>gi|124006883|ref|ZP_01691713.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123987564|gb|EAY27273.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 1441

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 77/263 (29%), Gaps = 64/263 (24%)

Query: 182 DISPDAPWVTEAV-VQQYVLAKEWSRAI------------TFLNQKKKNAKEWNRNRAIL 228
              P  PW       ++      + +A+              L    K  +E     A+ 
Sbjct: 40  QAQPTQPWEQVFRKTERLYKKGRYKKALRKHKKQKKKLTSEVLKAWGKI-QEAKSREALG 98

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286
              +  +  ++G    S   A++S       +  +  AA   +      KA  +LE+   
Sbjct: 99  HFDKMNQLLNEG---LSTLQAVKSNDFKSYLV-GAYKAADVYLEYGYYSKARKLLEEARQ 154

Query: 287 -WKVNPHPE---------------IANIYTHLLS-ENTVGKLKRA----LRLEE---INK 322
            W   P  +               +A  Y  +   ++    L +A      L      NK
Sbjct: 155 NWLSQPTGDSTAKDSIGLTEVNHRLAVTYIRIGKLKDAGQLLDQALPFWQNLIATPVANK 214

Query: 323 E------SVESLVIVSKIAL--EMGSIDQA--------HAKAMLAMKIAPRKEIFLLLAQ 366
                       +++++  L  + G  ++A             L  K +    ++  L Q
Sbjct: 215 WVRRYHKHQYIKLLIAQSMLMTDKGEYEKAAKFLLAKRRKVRKLIWKKSQTYGLY--LKQ 272

Query: 367 IEQANSHNTDKIL--YWTQSALH 387
           I    +++        W + AL 
Sbjct: 273 IADNYANDERYARSMRWYKKALK 295


>gi|120601409|ref|YP_965809.1| glycosyl transferase family protein [Desulfovibrio vulgaris DP4]
 gi|120561638|gb|ABM27382.1| glycosyl transferase, family 2 [Desulfovibrio vulgaris DP4]
          Length = 568

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 49/142 (34%), Gaps = 3/142 (2%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A++  R +    +  ++ +   G+   +     E+     ++    +  A  L +     
Sbjct: 14  AEDIAREQQNPTLRAAVLHLRLGETEQARRLLEEATAKSPHNGAIPLVMALHLAASGDGE 73

Query: 278 KAEVILEKIWKVNP-HPEIANIY-THLLSENTVGK-LKRALRLEEINKESVESLVIVSKI 334
            A+    K     P  PE    Y   LL ++   + L+      E+  +S+   +  +  
Sbjct: 74  GADTWFRKALAAEPDQPEALRAYGLFLLGQDATVRGLRLLRMAAELAPQSLAIGLECAGA 133

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
           A+  G    A   +   +  +P
Sbjct: 134 AIMCGEYHTARDMSRRILSASP 155


>gi|77920382|ref|YP_358197.1| hypothetical protein Pcar_2792 [Pelobacter carbinolicus DSM 2380]
 gi|77546465|gb|ABA90027.1| poly acetylglucosamine porin [Pelobacter carbinolicus DSM 2380]
          Length = 802

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 80/268 (29%), Gaps = 25/268 (9%)

Query: 113 QHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
           +       L V LL         +++ A +  + + Q+        Y+L   +   GD  
Sbjct: 128 ERFSSQPSLRVGLLL--TLADAGKHSEAADLAKSLEQLYPGHIGTQYALAHAAEGRGDYV 185

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRNRAILL 229
           +A +   + L   P + W     +       +   A     Q+       E +R RA   
Sbjct: 186 TALQCYQRILTWQPQSQWAQRMEILTLAAIGDPFLAGELAEQRPGLLTDSEIHRLRANRA 245

Query: 230 IARS----------LENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKS--LISQNKK 276
              +           E  D  D      +A E + +            A+   L++   +
Sbjct: 246 ALVTRWGSYGSEVHKERFDGTDRALEMLEANERAARADLPRSEGFARRARIDRLVALRDR 305

Query: 277 RKAEVILEKIWKVN-------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
            +   ++E+   +        PH + A     L  E  V       R+     ++ E+  
Sbjct: 306 VEMARVVEEYRSLQVDPDELPPHAQQAVADAFLYLEEPVRSADLYRRVLAAQPDNFEATQ 365

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +    LE    D A A A   +     
Sbjct: 366 GLFYAYLEQEDFDGALALAEKTLTEQAD 393


>gi|255594632|ref|XP_002536129.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
 gi|223520752|gb|EEF26254.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
           communis]
          Length = 448

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVT 191
           Y+ A +  E  LQ  P   E      +  +    ++G + +A++   KA+ ++P      
Sbjct: 2   YSQAAQAYEAALQLNPQAAEL----WFNYAIVQTQLGAMAAAEQAYRKAIALNPQFFEAH 57

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +        +   A+    Q  +         A           DKG + ++      
Sbjct: 58  GNLGTVLQKQGKLDEAMASYQQGLRIQP----QDARGHFNLGTVLRDKGQLQSAVQSYER 113

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP 293
           ++ L  N   A     ++   Q    +A    ++  + NP HP
Sbjct: 114 AIVLFPNYTDAYNNLGETWRDQGDMTRAVQYYQQALQRNPQHP 156


>gi|117925194|ref|YP_865811.1| hypothetical protein Mmc1_1897 [Magnetococcus sp. MC-1]
 gi|117608950|gb|ABK44405.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 598

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 82/277 (29%), Gaps = 30/277 (10%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL   + ++   ++  A ++   +  +     +   YL          Q  IA    E +
Sbjct: 20  ALTHAVEAMQNGDVGTALRVLQELCTRWPESLQGWKYL--AIALDGAGQNEIAETVYEKV 77

Query: 147 LQIPATR------EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           L               +  +       G    A     KA+ ++P   +    V    + 
Sbjct: 78  LSQTPWDHMLLHSYSGMLGVM------GRYEQAIEVIRKAIAVTPQLEYRQHLV--AMLF 129

Query: 201 AKEW-SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             ++  +A   LN   + A + +    + L  ++     +G    +         +    
Sbjct: 130 NGDFLDQAQMELNSLLQGACDLD----VCLYYQARIQHQQGLYEQALQSYQALTTIAPRH 185

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLS-ENTVGKLKR 313
           ++  I    +L        A    +   ++NP  PE    +A     L   E     L+ 
Sbjct: 186 VLGIIHKGIALKDLGDLESAVACYQWALQINPQQPEGWVNLAVTLERLNRLEEAQQALET 245

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           A  L      +    ++  ++       D A A+   
Sbjct: 246 AWNLV---PNNPLLRLVKIRLYRHAQRFDDALAELEA 279


>gi|116620510|ref|YP_822666.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223672|gb|ABJ82381.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 756

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 4/151 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             + E +   A  + E  LQ+      A  +L     + G +     +  KA+++ P   
Sbjct: 604 ALVREGRSEEAMAQFEATLQLDPAHANAHANLGAAMAQRGRIAEGIAHLEKAIELDPGHA 663

Query: 189 WVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                +     ++     AI  +    +    ++      +  +              S 
Sbjct: 664 QAHSNLGIALAMSGRLEDAIRQVEESSRLSAGQDAMTLDLLAALYAEAGRFGDAASAVSK 723

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             A         ++ A    AK    Q + R
Sbjct: 724 AIARAQALNQPRAVEA--MKAKLANYQERAR 752


>gi|306817254|ref|ZP_07451000.1| hypothetical protein HMPREF0580_0073 [Mobiluncus mulieris ATCC
           35239]
 gi|304649934|gb|EFM47213.1| hypothetical protein HMPREF0580_0073 [Mobiluncus mulieris ATCC
           35239]
          Length = 634

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 85/264 (32%), Gaps = 53/264 (20%)

Query: 127 VQIAL--AERQYNIAHEKLEMMLQIPATREF--AVYSLY--FESCRIGDLNSAQRYATKA 180
            Q A       Y  A           AT+    +   +    ES + GD  +A RYA  A
Sbjct: 385 AQSAQQILNESYLSAPIAHSRANLSQATKLLKASYKGILSGQESIKQGDEQTASRYARGA 444

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                 A    + +++        S  ++ L        +  RN+        +  A+  
Sbjct: 445 QRAIVQAKLAADNILKLQAYLGWVSDELSTLKVNLSQDVDSIRNQDSNASGPEIAMAE-- 502

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               + ++A  +L    +SI A +          K R A+  L   +      EI + + 
Sbjct: 503 ---RALNNANAALMGKADSIEALV----------KLRSAQASLYYAYAQQA--EIESKFR 547

Query: 301 HLLS--ENTVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
            L +  ++++   K+   L      + ++++E  ++V          D A          
Sbjct: 548 ELPADFDSSLQHTKQLRSLLETDLRLRRKNLEPRILV----------DLARCD------- 590

Query: 355 APRKEIFLLLAQIEQANSHNTDKI 378
                   LLAQI+     ++   
Sbjct: 591 -------QLLAQIQLKQHQDSTIA 607


>gi|297622722|ref|YP_003704156.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix
           DSM 17093]
 gi|297163902|gb|ADI13613.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
           17093]
          Length = 300

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 26/216 (12%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A   A +A++++PD P     + +   +   +  A     +        +      L+  
Sbjct: 72  ALSLARRAVELAPDNPEALRFLAELNGVTGFYGPAFAAWERFVAAGGVLDAAALDQLVRA 131

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEKIWK 288
             +             A+ + +   +       A     + L+   + ++A    E + +
Sbjct: 132 GTQVGYARYQQGDLEGALAAYERVADLAPERPLAHRWRGRILLELERPQRALEAWETVLR 191

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----------------------EINKESVE 326
           + P    A  +  L +      L  A                           +N    E
Sbjct: 192 LRPGDAAAEHFADLAAAGVRYGLPAARAFYDGVAHYEAGRRERARERFAEAARLNPAYAE 251

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +   V ++A E G   +A      A  + P    + 
Sbjct: 252 AWAYVGRVAFEAGDYREAERAYSEASALEPDNATYR 287


>gi|167646075|ref|YP_001683738.1| sulfotransferase [Caulobacter sp. K31]
 gi|167348505|gb|ABZ71240.1| sulfotransferase [Caulobacter sp. K31]
          Length = 624

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 81/290 (27%), Gaps = 38/290 (13%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
             ++ R  +L  A+  A  AL  +P        +          + A   + +  K   +
Sbjct: 58  MADAYRDRELVLAEHMAHAALREAPAHRDALGGLYNVCKDTGRIAAAEALVRRMAKLYPD 117

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
               R       +L    KG    +       ++L   +  A +         N+     
Sbjct: 118 DPMVRM----NAALFFRGKGAKGEAEAHGRALVRLAPTASAAHVTMGLVFNVTNQ----- 168

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                             +           L+RAL L        E+L  ++      G 
Sbjct: 169 ------------------FVSAEHH-----LRRALDL--GGPADAETLGALAIALRGQGR 203

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSA-LHAMPDPLWISD 397
           +D A      A+ +A R+   LL+  A +E+A S            A   A  DP     
Sbjct: 204 LDLARDAFAQAVAVATREAPHLLIAWADLEEAASRFDA-SETLLDRAQALAPRDPRIALG 262

Query: 398 DGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADD 447
              LS           TL   E + P      ++ +      +     D+
Sbjct: 263 RATLSRRRQAFQEALDTLDALEARGPKDQVAALAMKERGLVFDALGRHDE 312


>gi|163760361|ref|ZP_02167443.1| putative structural maintenance of chromosomes protein [Hoeflea
           phototrophica DFL-43]
 gi|162282312|gb|EDQ32601.1| putative structural maintenance of chromosomes protein [Hoeflea
           phototrophica DFL-43]
          Length = 1154

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 74/221 (33%), Gaps = 8/221 (3%)

Query: 145 MMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            M      R   + +   E+   + +  +  + +  A+            ++     ++ 
Sbjct: 630 AMRLEQKNRLAELDAEAVEATKALREAEAVLQESEAAVAQRVGEGKAARDLI--RDASRN 687

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-- 261
            SRA   L   ++ + E +  RA+L  +R+   A   +   +  +A  +LK C +     
Sbjct: 688 VSRARDELASAERASGELSNRRAVLTESRAQVGAQLAETQTALEEAATALKACPDLSALN 747

Query: 262 ASI--CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR-LE 318
           A++    A+    +    +A    E + + N               +   +   A   L 
Sbjct: 748 AALTKINAEVATDRGALAEARAAHEGLERENQARARRLEAIAAERASWSERATNAESHLA 807

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            +   + E+   V++IA     I     + M  +    ++ 
Sbjct: 808 SLRTRADETQAEVTQIAEAPDEIAVRRRELMHQLSEVEKRR 848


>gi|123404387|ref|XP_001302423.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121883710|gb|EAX89493.1| hypothetical protein TVAG_324720 [Trichomonas vaginalis G3]
          Length = 195

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 16/181 (8%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146
           AL   L S+A  +      +   +     F NEY+   LE+Q            +  E  
Sbjct: 7   ALEEELESLAGLDEIPEEALTQAIDHTSEFFNEYVTPRLELQTLSQIHDDVENEQ-YEN- 64

Query: 147 LQIPATREFA------VYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            +    R         +  +   + +    G+  +A  YA  A    P+AP   E + + 
Sbjct: 65  -KNKKRRALGEKMPPEIAGVMAHAYQEFYAGNNANAIHYANDARRTLPNAPEPYEILAEI 123

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                ++  A+TF  +  + A++                        +     E+ K   
Sbjct: 124 AKSEDDFENALTFTKKAAERARDAMEVWQDCYSLA----MRLNRPEEAASYLREAAKSSP 179

Query: 258 N 258
           +
Sbjct: 180 D 180


>gi|268317515|ref|YP_003291234.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
 gi|262335049|gb|ACY48846.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
          Length = 607

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 81/273 (29%), Gaps = 37/273 (13%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCR 166
             + T  N  +  L    +   + +Y  A E     LQ  A R       +     E+  
Sbjct: 158 RARRTLANPSVFLLDLAYLYSLDGRYEEAMESYREFLQQDARRLGFVQTRLEPFMDEAAA 217

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
                +      +A+   P  P   + +   Y+   ++ RA+    +     ++      
Sbjct: 218 R---EAGIAVFERAVRREPLNPAFRQMLAWLYLRNGDYDRALDV-YRALDRLQQAQGQLL 273

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ---NKKRKAEVIL 283
           +    ++ +        A+  D +         +  +      L  Q   +    A  + 
Sbjct: 274 LQFALQARDAGALDAARAALEDILRQSGAS--VLPEAHYELGLLYEQQAHDGDTTAARLA 331

Query: 284 EKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEINKESVESLVIV----------- 331
             +++     +    +  H L  + + +L R       + ++ +SL+ V           
Sbjct: 332 RHMYR-----DFLTAFPGHPLVPDALYRLARLELDVLYHPQAADSLLAVLLDRYADHEVA 386

Query: 332 -------SKIALEMGSIDQAHAKAMLAMKIAPR 357
                   ++AL+ G +  A    +  +     
Sbjct: 387 WQARFDQGRLALQAGDLSAARLAFLRLLDARRT 419


>gi|207744712|ref|YP_002261104.1| tpr domain protein [Ralstonia solanacearum IPO1609]
 gi|206596119|emb|CAQ63046.1| tpr domain protein [Ralstonia solanacearum IPO1609]
          Length = 266

 Score = 38.8 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 27/226 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A KAL I PD      ++    +   +W      L Q    A E N   AI     
Sbjct: 17  AKMAARKALQIEPDLGEAYASLAHVRLHDWDWVG----LEQDFLRAIELNPGHAIAYYWY 72

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +      G    +     +S ++   + + +   A  L    +  +A   L +  +++P 
Sbjct: 73  AEYLMAAGRAEEAIVRVRQSRQMDPLNSVLNSSVAIILYLARRYDQAREELHQALEIDPN 132

Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               H  +  +Y      ++ + +++ A+ L      S E+L  +++       +  A  
Sbjct: 133 HFLLHFRLGLVYQQQKLFDDAIAEMQTAVTLSGR---STEALTGLAQT-YAAADMRAAMQ 188

Query: 347 KAMLAMK-------IAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           + + A++       I P       +A++   +  + ++   W + A
Sbjct: 189 QIVDALENASEKHYIHPYN-----MARV-FGSLGDQEQTFGWLEKA 228


>gi|302694193|ref|XP_003036775.1| hypothetical protein SCHCODRAFT_230806 [Schizophyllum commune H4-8]
 gi|300110472|gb|EFJ01873.1| hypothetical protein SCHCODRAFT_230806 [Schizophyllum commune H4-8]
          Length = 1271

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 12/107 (11%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKA--- 180
           L +Q          A   +EMM          +Y++  +   R GD  + QR   +    
Sbjct: 605 LVIQAYTRAGDRAAAKRWVEMMRNDGYMPSVDIYAMVLQMHARRGDHKALQRVMRQMERS 664

Query: 181 ---LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              L  +P       +V+      ++   A    ++  ++  + +R 
Sbjct: 665 DIVLTAAPY-----TSVINLLAKQRDIDGAEHIFDRALRHGVKPDRR 706


>gi|167533702|ref|XP_001748530.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773049|gb|EDQ86694.1| predicted protein [Monosiga brevicollis MX1]
          Length = 463

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 35/265 (13%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIG 168
                      + L + +      +   A      +L+          V  L       G
Sbjct: 153 RALELAPQAAQLKLKQAEYMRLAGRSGEAERLASNVLREDGMHAEALYVRGLCL--IDRG 210

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR--- 225
           +L  A  +  +AL  +PD      A +    +          +N K++  + +   R   
Sbjct: 211 ELEQALAHFKRALQSNPDH---QRARISLKSVKG-------IVNAKERGTEAFKAGRLEE 260

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASI---CAA--------KSLISQ 273
           A+     +L   D  ++  +      ++ L   + +  +I     A        K+L+ +
Sbjct: 261 ALGCYQEALSMDDSDNVFTAKLHFNCAVVLSKMDRVPEAIDCCTRALECDDQYIKALLKR 320

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            + R      E+  +                 N   +        E+ K   +    +  
Sbjct: 321 GELRLKNEQFEEAVEDY------QAAVEAEPGNNEYRSSLRHAKLELKKSKRKDYYKLLS 374

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358
           +A +    D   A    A++  P +
Sbjct: 375 VAKDASDSDIKRAYKKAALRCHPDR 399


>gi|170723582|ref|YP_001751270.1| response regulator receiver protein [Pseudomonas putida W619]
 gi|169761585|gb|ACA74901.1| response regulator receiver protein [Pseudomonas putida W619]
          Length = 535

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 19/172 (11%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q A A+  Y  A +   +M  +          +       G+   AQ    +A+ +SP
Sbjct: 211 RGQHAQAQGVYEQALKAFPIMPSLYD-------GMADVLVAQGETKRAQNMLEEAVRLSP 263

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--LLIARSLENADKGDMI 243
            A     A+ +  +  +++  A           +      A   L + ++L N + G  +
Sbjct: 264 LAVRRQAALGKLALDNEDFEGASKAFRHAVNQGQSSRYKDAESNLGLVQALMNKNAGFGL 323

Query: 244 ASY----------HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +             A ++++     + A +  A SL        A  + E+
Sbjct: 324 DARTRVEINTVLSEVAKDNVEDQGLQVRARLMKAASLQQAGDSETAAKLTEQ 375


>gi|15242650|ref|NP_195936.1| ATP58IPK (ARABIDOPSIS HOMOLOG OF MAMALLIAN P58IPK); binding / heat
           shock protein binding [Arabidopsis thaliana]
 gi|7413593|emb|CAB86083.1| putative protein [Arabidopsis thaliana]
 gi|9757767|dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana]
 gi|21553467|gb|AAM62560.1| unknown [Arabidopsis thaliana]
 gi|332003179|gb|AED90562.1| mamallian P58IPK-like protein [Arabidopsis thaliana]
          Length = 482

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 41/203 (20%)

Query: 136 YNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
              A E  E +   P      V+    L   S R+G          +AL+I  +      
Sbjct: 262 RVSAEEYKEAIALDPEHTANNVHLYLGLCKVSVRLGRGKDGLNSCNEALNIDAELIEALH 321

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
              +  +L ++W  A+  L Q  +N+++   + ++    ++L+ + + D       +  +
Sbjct: 322 QRGEAKLLLEDWEGAVEDLKQAAQNSQDMEIHESLGKAEKALKMSKRKDWYKILGISRTA 381

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---------------IAN 297
                              S ++ +KA   L   W    HP+               IA 
Sbjct: 382 -------------------SISEIKKAYKKLALQW----HPDKNVGNREEAENKFREIAA 418

Query: 298 IYTHLLSENTVGKLKRALRLEEI 320
            Y  L  ++   +  R   LE++
Sbjct: 419 AYEILGDDDKRARFDRGEDLEDM 441


>gi|238785319|ref|ZP_04629308.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           bercovieri ATCC 43970]
 gi|238713772|gb|EEQ05795.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           bercovieri ATCC 43970]
          Length = 249

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+   N A + LE  ++       A   + F   RIG+ ++A++    A+
Sbjct: 35  TRLQLGLEYLAQGDLNAARQNLEKAVEADPQDYRAQLGMAFYEQRIGENSAAEQRYQHAM 94

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +             ++         A++ D
Sbjct: 95  KLAPGNGTVLNNYGAFLCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYCFLRANQND 154

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 155 --QARLLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194


>gi|116749875|ref|YP_846562.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698939|gb|ABK18127.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 318

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 42/242 (17%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            + +      P  +     +L       G ++ A +   + +D  PD       +     
Sbjct: 81  RQAIRQNPGDPKAQF----NLAVIYQDQGRMDEAGKIYRELVDRHPDYAAAWVNLASIRE 136

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A +   A        +   E  R+ +  L         +     +     E+LK   + 
Sbjct: 137 QAGDHEEAERLF----RRGVEATRDDSAPLSQYGFFLLRRDRPAEAAEVFREALKRDASC 192

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
             A     +      ++ +A                               L+R  R   
Sbjct: 193 ANACFGLGEIAEKSGERAEA-------------------------------LRRYERAAR 221

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQI--EQANSHNTD 376
            N    E+ +  ++IA  +G    A A    A+ + P +   FL L Q+  E     + +
Sbjct: 222 YNPTDFEARLRAARIAASLGERPGAIAHMQAAVALKPDRGDAFLFLGQLLREDGQMKDAE 281

Query: 377 KI 378
           + 
Sbjct: 282 RA 283


>gi|258592531|emb|CBE68840.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 563

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 35/190 (18%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
              + L   I LA  + + A E  E   ++  T      ++     ++GD   A +   +
Sbjct: 367 PGTHTLLGVIHLAMGRPDAALEAFETAHRLGDTTPSLFVNIGAAHNQLGDSEKAMQAFRE 426

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWS------------------------RAITFLNQKK 215
           AL   P+       + Q Y     WS                        +A+  L    
Sbjct: 427 ALAGEPELQNARLGLCQAYAQLGRWSELVEEGHTLLQQGVVEPALYRLIGKALWSLEAWT 486

Query: 216 KNAKEWNRNRAIL------LIARSLENADKGDMIASYHDAIESLKLCD-----NSIMASI 264
                +    A+           ++     G+ + +   A  +L L       + + A +
Sbjct: 487 AAVPVYEALCALANPTPSDWSGLAIAALGAGEPLKALQTAEHALGLNPPTELQSLLQAVV 546

Query: 265 CAAKSLISQN 274
             A+  + Q+
Sbjct: 547 VEAREALRQD 556


>gi|283780564|ref|YP_003371319.1| hypothetical protein Psta_2793 [Pirellula staleyi DSM 6068]
 gi|283439017|gb|ADB17459.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 2545

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 9/97 (9%)

Query: 136  YNIAHEKLEMMLQIPATREFA----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
            Y+ A    E + +            +  +   + R GD + A+      L+  P+     
Sbjct: 1028 YDQAELVFEKLARSTEVDVVVRAEFLRGVL--AFRRGDRDEARDIFRAVLERVPNVELAN 1085

Query: 192  EAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            +A+    + Y   +++   +  L    +  +   R  
Sbjct: 1086 QALFNLAEVYGAEEKYIDQLNLLRTVGRLGRASKRRH 1122


>gi|251791637|ref|YP_003006358.1| cellulose synthase operon C domain-containing protein [Dickeya zeae
           Ech1591]
 gi|247540258|gb|ACT08879.1| cellulose synthase operon C domain protein [Dickeya zeae Ech1591]
          Length = 1309

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 63/232 (27%), Gaps = 54/232 (23%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ------- 128
             +    +G + L  GL +  + +   A +            +  L  L + +       
Sbjct: 202 YQESTRREGMQMLS-GL-ASGSADADQAMRQALLWLAPKI-DDAPLYQLYQQRHPQDSAV 258

Query: 129 -----------------IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
                             AL     + A      +LQ       A+  + + + R GD  
Sbjct: 259 MDYYRKNVGGNEKDRGFTALNSGDLSSAQTAFGQVLQANPEDADALAGMGYAAQRRGDFA 318

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A  Y  +A                          A        +  ++ +  R    +A
Sbjct: 319 AAASYLDRA--------------------------ARQGGENSAQRRQQADDARFYAQLA 352

Query: 232 RSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            + +    GD   +   +   +    D  + A +  A  L   N   +AE +
Sbjct: 353 NAQQAMKGGDTAQALTLSEPLAQAGGDKGLTAKLFRADVLRRTNNFSQAERL 404


>gi|108762308|ref|YP_634430.1| M50 family peptidase [Myxococcus xanthus DK 1622]
 gi|108466188|gb|ABF91373.1| peptidase, M50 family [Myxococcus xanthus DK 1622]
          Length = 475

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 76/262 (29%), Gaps = 35/262 (13%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAV- 157
           +A  + +  +Q           L E + AL   + + A      +L+       R  +  
Sbjct: 229 VAEALRNGQAQSVPLEGPLAEKLREARAALDAGRMDEARRLGASVLEANEGLTPRVASHA 288

Query: 158 YSLYF-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + L    + + G    A  +           P    AV   + L  + +RA+ +  Q  +
Sbjct: 289 HHLMGWLALKEGQGRQALDH----FSQVQGLPVEPHAVAASFSLVGDDARAVEWWKQAWQ 344

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQN 274
           ++ +             +                E+LKL       +   CA + L  + 
Sbjct: 345 SSSDRTVMHEYAGTLIRMGRES------------EALKL-PGLDPEAAFSCAERVLFIRG 391

Query: 275 KKRKAEVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
              +A  + E   +  P   +A      H  + N    ++   R  E+           +
Sbjct: 392 AYSEAAAVGEAALQHAPSATLAYDAACAHARARNVPDAMRLLRRATELG---------FA 442

Query: 333 KIALEMGSIDQAHAKAMLAMKI 354
             A      D A      A + 
Sbjct: 443 DGAYAASDEDLAPLHGYPAFEE 464


>gi|74318217|ref|YP_315957.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74057712|gb|AAZ98152.1| conserved hypothetical protein containing TPR repeat [Thiobacillus
           denitrificans ATCC 25259]
          Length = 555

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +   ++  A+    +  +    +       L  R+  +  +GD   +  DA   ++L
Sbjct: 435 GLRMERGDFGGAVDDFTRALRADPGYRE----ALKGRAFAHMKRGDHSRALADATALIRL 490

Query: 256 CDNSIMASICAAKSLISQNKKRKA 279
             +   + I        Q   R A
Sbjct: 491 DPSRRDSYIARGHVYKDQGDWRLA 514


>gi|332992514|gb|AEF02569.1| putative transcriptional regulator, CadC [Alteromonas sp. SN2]
          Length = 630

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 23/192 (11%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL +S +      ++   YV A  W+ A   LN  K      N    +  +  +L  A  
Sbjct: 383 ALAVSSNNADALSSLGLAYVFAWRWNDAWKVLNAAKSQ----NSELVLTELGFALYYAGL 438

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW---KVNPHPEIA 296
           GD+        ++ KL   ++  +     +L        A       W   K+  HP ++
Sbjct: 439 GDVEGVKRALRQADKLDPLNVELADWGHWALAMVGDFDAAV-----AWARVKIKQHPRVS 493

Query: 297 NIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
            +Y        L+ E+    +  A +   +  +   +L+ +S+     G       K   
Sbjct: 494 VLYSGASVSLSLMGEH-EEAIAFAQKGVALAPQYPFALIALSQAYGYAGD----KHKIAP 548

Query: 351 AMKIAPRKEIFL 362
            +K A     F+
Sbjct: 549 LLKQAETLNAFM 560


>gi|262405967|ref|ZP_06082517.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|298479971|ref|ZP_06998170.1| TPR domain protein [Bacteroides sp. D22]
 gi|315921345|ref|ZP_07917585.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|262356842|gb|EEZ05932.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|295085585|emb|CBK67108.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A]
 gi|298273780|gb|EFI15342.1| TPR domain protein [Bacteroides sp. D22]
 gi|313695220|gb|EFS32055.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 564

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 21/112 (18%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           A      + A    +    + AT E      + SL       GD  +A+ Y  KA     
Sbjct: 398 AYQAGNIDKAESYFKKAASVNATPEVNMNLGLISLMK-----GDKAAAEAYFGKAAGTK- 451

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILL 229
               + E++   Y+   ++ RA+              +  AK++N+ +  L 
Sbjct: 452 ---ELGESMGNLYIAQGQYERAVNSFGDSKTNSAALAQILAKDYNKAKNTLA 500


>gi|209517117|ref|ZP_03265964.1| TPR repeat-containing protein [Burkholderia sp. H160]
 gi|209502510|gb|EEA02519.1| TPR repeat-containing protein [Burkholderia sp. H160]
          Length = 779

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 15/204 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            GDL +A+     AL   P+   +   +  ++      +   A+  L++    A    R+
Sbjct: 16  AGDLPAARALYETALAEQPENADIRLRLGILELQC--GDGESALAQLDRAIAIAPGDVRH 73

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           RA+    R+      G    +     E++ L             +L +Q     A     
Sbjct: 74  RAM----RAHVLHSLGRFAQAAATLREAITLDPTDAELHAALGNALQAQGDHHAAIDAYT 129

Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
                +P        + N +  L + +  G+  RA    +       + +      L  G
Sbjct: 130 SALARDPANADFASNLGNSHRQLGALDAAGRAYRAALAAQPAHALALTQLGTLLDQL--G 187

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363
             D+A A    A+++ PR    L+
Sbjct: 188 HHDEALALLREAVRVDPRAPAALI 211



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 10/137 (7%)

Query: 124 LLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           L   +          A    E  + + P   +  +  L     + GD  SA     +A+ 
Sbjct: 7   LAHAKARHLAGDLPAARALYETALAEQPENADIRLR-LGILELQCGDGESALAQLDRAIA 65

Query: 183 ISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           I+P    V    ++ +VL     +++A   L    + A   +   A L  A       +G
Sbjct: 66  IAPG--DVRHRAMRAHVLHSLGRFAQAAATL----REAITLDPTDAELHAALGNALQAQG 119

Query: 241 DMIASYHDAIESLKLCD 257
           D  A+      +L    
Sbjct: 120 DHHAAIDAYTSALARDP 136


>gi|146278506|ref|YP_001168665.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145556747|gb|ABP71360.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 566

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 69/238 (28%), Gaps = 7/238 (2%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           L    +  +     +    +      +     LL  QI   + Q+ +A E    +     
Sbjct: 262 LAGALSGEVDDGSTLLYARTATFLRPDHTEALLLSAQILDNQGQHQLASETYARIPTSDP 321

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A           G   ++            D   V  A+       + ++ A+   
Sbjct: 322 MFFVAEIGRAEALRADGKTEASLEVLQAVARSRSDLMQVHLALGDALRREERYADAVAAY 381

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +          R    L  +R + +        +  D  ++L L  +          S +
Sbjct: 382 DAAIARVAAPERQHWPLFYSRGICHERLSHWTEAEADFRKALALNPDEPQVLNYLGYSFV 441

Query: 272 SQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTVGKLKRALRLEEINK 322
            +     +A  ++E+     P        +A  Y  L   ++ V  +++A  LE ++ 
Sbjct: 442 DRGENLEEALSMIERAVAARPESGYIIDSLAWAYFRLGRYQDAVEPMEKASVLEPVDP 499


>gi|148657552|ref|YP_001277757.1| hypothetical protein RoseRS_3449 [Roseiflexus sp. RS-1]
 gi|148569662|gb|ABQ91807.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 357

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 54/161 (33%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
           H+ V ++ +   E  +   + QI L + +   A E+ E  +      + A          
Sbjct: 186 HAAVDKRASVEQESRMLCDQGQILLRQGRPQEALERFEAAIAAWDANQSAWLWRAMALTD 245

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           +G  + A     +AL + P++  +        +       A+    +    A   +  +A
Sbjct: 246 LGRFDEALASYDRALALEPESAGMWNNKGSLLMELGRLEAALQCFERAIDLAAPVSTVKA 305

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           +  + R       G    +    + S  L  +   A+  AA
Sbjct: 306 VYWLNRGKALYMLGRYAEARDALMHSHDLDPSPESAAGIAA 346


>gi|24372346|ref|NP_716388.1| TPR domain-containing protein [Shewanella oneidensis MR-1]
 gi|24346297|gb|AAN53833.1|AE015521_1 TPR domain protein [Shewanella oneidensis MR-1]
          Length = 395

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 9/191 (4%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+  L + + N +      A+     + E+  +GD+  +Y      LK   +   A    
Sbjct: 195 ALRGLAKVQINRQTLT---AMFYNNMAAESLVEGDLDHAYALVKAGLK-SGHFSPALNTL 250

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA----LRLEEINK 322
           A     +  +++AE +     K +P  ++  ++   +  +  G+L+       +LE    
Sbjct: 251 AVIYRHKGDEKRAEQVYRYALKFDPD-DMTTLFNLAVILDNQGRLEEWAQIHKKLELARI 309

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382
            +      + + A +     +A A    A+  A  +  F            +  +     
Sbjct: 310 RNPYYYYDMGEQAYDEHQYREALAWYQRAVDKADYRHEFFFGLSRTYWALGDEKRAKQNM 369

Query: 383 QSALHAMPDPL 393
           + AL    +  
Sbjct: 370 EKALALSREAA 380


>gi|50549085|ref|XP_502013.1| YALI0C19426p [Yarrowia lipolytica]
 gi|49647880|emb|CAG82333.1| YALI0C19426p [Yarrowia lipolytica]
          Length = 883

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 58/150 (38%), Gaps = 11/150 (7%)

Query: 165 CRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
             +G  + A+    KA  + ++ +  WV    +++ +       AI+   +  +   E +
Sbjct: 595 LEVGQPDRARDLLEKARDVGVARETLWVRAVRLERELGKA--PAAISLAEKALEEFVECD 652

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                L I       +   +  +    I+  K C  S+   I  A +  S+  + +A  +
Sbjct: 653 G----LWIELGKAKTESSGVPEARDTYIQGTKNCPKSVALWILLAAAEESRGVQIRARSV 708

Query: 283 LEKIWKVNPHPE---IANIYTHLLSENTVG 309
           LE+   +NP+ E   +A +   L + N   
Sbjct: 709 LEQAALINPYNEELWLARVRLELRAGNIAQ 738


>gi|116622585|ref|YP_824741.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225747|gb|ABJ84456.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 1006

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 68/260 (26%), Gaps = 27/260 (10%)

Query: 40  SPFVILSILYFFLFAWILL--------------FAVSRFFLSCPAMLFHMLHKRNY---- 81
           S  V++S L     AW+LL                + + F   P      + +       
Sbjct: 8   SSPVLISALAASGLAWMLLAQTTRPDQNQLWRYRNLGKAFYENPTTQKQAVDEFKKALTL 67

Query: 82  --DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
             +   + +  GL  + A ++P    M      Q         +         +     A
Sbjct: 68  APESVRERVNYGLALLRAGDVP--HGMEELQKAQKADPKLPHTWFNLGIALKKQGDLEGA 125

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
             + +  +++        Y +       GD   A R    A ++ P        +   Y 
Sbjct: 126 LAQFQTYVKLVPNEPVGHYQVASILKANGDQAGAAREFETARNLDPKLAAPHFQLYGLYR 185

Query: 200 LAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                + A   L      +K++       +      A   +  D             S +
Sbjct: 186 QLNRPAEAAAELRTFQELKKQQEGAAVPEDMEWSFYAEIYDPIDAPAAAPLPPPVYRSER 245

Query: 255 LCDNSIMASICAAKSLISQN 274
           + +        AA  +I   
Sbjct: 246 IGEGFSPGPAGAAAIIIDTG 265


>gi|297470790|ref|XP_002684752.1| PREDICTED: filamin A interacting protein 1-like isoform 1 [Bos
           taurus]
 gi|296491542|gb|DAA33585.1| filamin A interacting protein 1-like isoform 1 [Bos taurus]
          Length = 1130

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 3/114 (2%)

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQ 197
           +   +M+     R  A  +L  +  +    ++ + +A  AL  +       +A     + 
Sbjct: 233 KSFALMVVDEQQRLTAQLALQRQKIQDLTTSAKETHAKLALAEARAQEEEQKATRLENEL 292

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                ++ +    +  K  N    NR     L A S +  +  +   S   A E
Sbjct: 293 QTQTTKFHQNQETIMAKLTNEDSQNRQLRQKLAALSRQIDELEETNRSLRKAEE 346


>gi|260462338|ref|ZP_05810546.1| Lytic transglycosylase catalytic [Mesorhizobium opportunistum
           WSM2075]
 gi|259031832|gb|EEW33100.1| Lytic transglycosylase catalytic [Mesorhizobium opportunistum
           WSM2075]
          Length = 691

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 51/161 (31%), Gaps = 34/161 (21%)

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY--HDAIESLKLCDN-SIMASICAAK 268
           +   ++  + + + ++ L+   L+    GD+  +    DA+ +  L  +    A      
Sbjct: 53  DPNLQDKAQQDPSPSVALLKSGLDALAAGDIPRARGVRDALPAHALDQHILAWAIALYGG 112

Query: 269 SLISQNKKRKAEVIL--------------EKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
             +       A  +L                +++ NP P+I                   
Sbjct: 113 DKVPSGDIAAAAKMLPNWPGTIALRKNSERALYRENPAPDIV-----------------V 155

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
              +    ++ E ++++++  +  G    A +      + A
Sbjct: 156 RAFDGSQPQTFEGVMVLARAYVASGDTKAARSVLSPFWRTA 196


>gi|124024559|ref|YP_001018866.1| hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964845|gb|ABM79601.1| Hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
           9303]
          Length = 334

 Score = 38.8 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 24/175 (13%)

Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           + Y  A    +  ++I     R +      F    + D   A    T+A++I+P      
Sbjct: 94  KDYQGAITDYKKAIEIDPQYARAYFNRG--FAKSNLKDYQGAIADFTRAIEINPQLADAY 151

Query: 192 -------EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                  + +        ++++AI             N   A     R L     GD   
Sbjct: 152 FNRGLAKDDLKDYQGAIADYTKAIEI-----------NPQYAAAYNNRGLAKVKSGDTQG 200

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           +  D  +++++      A     ++       + A     K  ++N  P++A  Y
Sbjct: 201 AIADWGKAIEINPQYAAAYYNRGRAKYDLKSYQAAIADYNKAIEIN--PQLAIAY 253


>gi|296333003|ref|ZP_06875460.1| hypothetical protein BSU6633_18008 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674893|ref|YP_003866565.1| hypothetical protein BSUW23_11080 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149854|gb|EFG90746.1| hypothetical protein BSU6633_18008 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413137|gb|ADM38256.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 423

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 41/139 (29%), Gaps = 11/139 (7%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +   A  ++  A    E  +     P T         F + + G + +A +  +   ++
Sbjct: 178 AESLSASGEFEDAIPWYEKAVDENPDPNTIF----GYGFTALQAGLVKTAIKQLSDLKEL 233

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P    +   + + Y     +  A+       K    ++     L +  +      G   
Sbjct: 234 DPSYSSLYMPLSKSYEAEGMYEEALKT----AKEGIRYDEYNKELFLYAAKMALKIGKSE 289

Query: 244 ASYHDAIESLKLCDNSIMA 262
                  E+L L    + A
Sbjct: 290 DGKQLLQEALALDPGFVEA 308


>gi|296159959|ref|ZP_06842779.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1]
 gi|295889705|gb|EFG69503.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1]
          Length = 391

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 88/258 (34%), Gaps = 28/258 (10%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+     +L+    A  
Sbjct: 84  GETDRAIRVHQNLLSRADLPVSERDHALYELGQDFLKAGLLDRAEETFR-SLETGDYALG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W ++I      +    E  ++  A      + E   +     +   
Sbjct: 143 AQRALLTIYEIEKDWVKSIDTARHLETMGAESLDKEIAQFHCELAQEALQQKKPDEARRQ 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIAN----IYTHL 302
              +LK    ++ A+I       +   +  A     ++ + NP   P +A      Y  L
Sbjct: 203 LGFALKANPTNVRATILFGDVDAAGGAQEAAIAQWRRVEEQNPAYLPLVAEKLMKAYEAL 262

Query: 303 -LSENTVGKLK----RALR--LEEINKES------VESLVIVSKIALEMGSIDQAHAKAM 349
              ++    L     R     L ++  +        E+   +++  ++         + +
Sbjct: 263 GRPQDGADLLTTWVDRYPTNDLLDVAYQHVASLRGPEAAHALARSQMQKSPNLAGMTRLL 322

Query: 350 LAMK---IAPRKEIFLLL 364
            A +     PR+    L+
Sbjct: 323 EAQEAVAEEPRRSELELM 340


>gi|288960380|ref|YP_003450720.1| TPR repeat-containing protein [Azospirillum sp. B510]
 gi|288912688|dbj|BAI74176.1| TPR repeat-containing protein [Azospirillum sp. B510]
          Length = 302

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 1/157 (0%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  L +        ++  A E    +L++   +  A++ L   + +IG          KA
Sbjct: 5   LEALTQALDLHLAGRFGEAQELYTRILEVEPEQPDALHYLGVLAGQIGRGEVGLTLVDKA 64

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
             + PDA  +              + A     +      ++         AR     D  
Sbjct: 65  ATLRPDAADIHANRANLLRGLGRLAEADDGYRRALALRPDFAEAWTDRAFARG-GRGDPA 123

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           D+         +L++  +   A       L  + + R
Sbjct: 124 DVDTVTEMLERALRVEPDLGPAREKLVDLLHKRGRLR 160


>gi|237717199|ref|ZP_04547680.1| TPR domain-containing protein [Bacteroides sp. D1]
 gi|229443182|gb|EEO48973.1| TPR domain-containing protein [Bacteroides sp. D1]
          Length = 560

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 21/112 (18%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           A      + A    +    + AT E      + SL       GD  +A+ Y  KA     
Sbjct: 394 AYQAGNIDKAESYFKKAASVNATPEVNMNLGLISLMK-----GDKAAAEAYFGKAAGTK- 447

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILL 229
               + E++   Y+   ++ RA+              +  AK++N+ +  L 
Sbjct: 448 ---ELGESMGNLYIAQGQYERAVNSFGDSKTNSAALAQILAKDYNKAKNTLA 496


>gi|213983159|ref|NP_001135492.1| adenosine monophosphate-protein transferase FICD [Xenopus
           (Silurana) tropicalis]
 gi|257096372|sp|B4F6I5|FICD_XENTR RecName: Full=Adenosine monophosphate-protein transferase FICD;
           AltName: Full=AMPylator FICD; AltName: Full=FIC
           domain-containing protein
 gi|195539797|gb|AAI67892.1| Unknown (protein for MGC:135350) [Xenopus (Silurana) tropicalis]
          Length = 446

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           AI  L  K+K   +  +  A   + ++LE   +G    ++     +LK+  + + A    
Sbjct: 76  AIELLVLKQKPTSDV-KFEAKAALNQALEMKRQGKKEKAHKLLHHALKMDPDHVDALNEL 134

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH 292
              L  +    +A+ +  K   ++PH
Sbjct: 135 GILLEEEKDIIQADYLYSKALTISPH 160


>gi|167888951|gb|ACA09744.1| zinc-dependent protease [Pseudomonas putida]
          Length = 477

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 27/62 (43%)

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +  E      KR   L E N ++  +   ++   ++ G +++A     L +  AP + I+
Sbjct: 276 IYEETPGLGAKRFRALLEENPKNDAARYGLAIAQIKGGQLNEARENLKLLLAKAPNEIIY 335

Query: 362 LL 363
            L
Sbjct: 336 NL 337


>gi|160884147|ref|ZP_02065150.1| hypothetical protein BACOVA_02124 [Bacteroides ovatus ATCC 8483]
 gi|156110489|gb|EDO12234.1| hypothetical protein BACOVA_02124 [Bacteroides ovatus ATCC 8483]
          Length = 564

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 21/112 (18%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           A      + A    +    + AT E      + SL       GD  +A+ Y  KA     
Sbjct: 398 AYQAGNIDKAESYFKKAASVNATPEVNMNLGLISLMK-----GDKAAAEAYFGKAAGTK- 451

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILL 229
               + E++   Y+   ++ RA+              +  AK++N+ +  L 
Sbjct: 452 ---ELGESMGNLYIAQGQYERAVNSFGDSKTNSAALAQILAKDYNKAKNTLA 500


>gi|12856889|dbj|BAB30817.1| unnamed protein product [Mus musculus]
          Length = 298

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + + EW                     A +        AD+G+  A+     E+++L   
Sbjct: 16  IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 71

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
            + A       L  +N+ ++AE +L    ++   P+ A  + +L        LKR  
Sbjct: 72  YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 124


>gi|84386791|ref|ZP_00989816.1| TPR repeat protein [Vibrio splendidus 12B01]
 gi|84378319|gb|EAP95177.1| TPR repeat protein [Vibrio splendidus 12B01]
          Length = 246

 Score = 38.4 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 30/221 (13%)

Query: 127 VQIALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            ++AL   +   A +    ML  +    +   +      + +    + A  Y  + ++++
Sbjct: 33  AEVALMNGKPESAMDLYRKMLISKPDDPQLLLLMG--SAANQASRYDEALHYLKRGIELN 90

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGD 241
             +            L + W  A+  L Q     +E  R      +   +  +  +    
Sbjct: 91  QSSA-------IYRELGRAWL-ALGELEQATSALEESVRLVTTDDVAHNSLGVSYSLNKQ 142

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +      +L L  +S       A + I   K  +   IL        HP        
Sbjct: 143 YSKARESYSHALSLMPSSNEYRNNLAMAWILDGKPEQGIRIL--------HPIF------ 188

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            +      KL+  L L         S   +++  L    + 
Sbjct: 189 -VRGEASVKLQLNLALAYALSGDSASAKSIARAHLSQPELA 228


>gi|330859272|emb|CBX69622.1| hypothetical protein YEW_DZ17570 [Yersinia enterocolitica W22703]
          Length = 234

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 62/191 (32%), Gaps = 12/191 (6%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           M+  + + P      +    +     EYL           +     A + LE  +     
Sbjct: 1   MAGCSGSSPEKVSQSAAGQTRLQLGLEYLT----------QGDLTAARQNLEKAVAADPQ 50

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
              A   + F   RIG+ ++A++   +A+ ++P    V            ++  A    +
Sbjct: 51  DYRAQLGMAFYEQRIGENDAAEQRYQQAMKLAPGNGTVLNNYGAFLCSLGQYVLAQQQFS 110

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
               +        ++         A++ D   +      +LK   +     +  A+    
Sbjct: 111 AAVLSPDYGQVADSLENAGYCFLRANQND--QARVLLSRALKYDPDKGEPLLAEAQRHFG 168

Query: 273 QNKKRKAEVIL 283
           +  + +A+++L
Sbjct: 169 EGNRAQAQLLL 179


>gi|328907888|gb|EGG27651.1| tetratricopeptide repeat protein [Propionibacterium sp. P08]
          Length = 328

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 41/142 (28%), Gaps = 6/142 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-EFAVYSLYFESCRIGDLNSAQRYAT 178
            ++  +  + A    +Y  A      + ++        V  +      +G   +A R   
Sbjct: 149 PVLREVAAEAAYQAGEYASALNDYRALRRMTGNDNFLPV--IADCERALGRPQAALRLIR 206

Query: 179 K--ALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +  A D++P     +            +   A+  L    KN        A L  A +  
Sbjct: 207 EGQAADLNPSQQVELVLVQAGARCDLGQRDEAVRVLRDAVKNLTAPTEATARLHYAYAET 266

Query: 236 NADKGDMIASYHDAIESLKLCD 257
             + GD   +      + K   
Sbjct: 267 LLEDGDTAGARTWFASAQKHDP 288


>gi|302851897|ref|XP_002957471.1| kinesin-like protein with TPR domains [Volvox carteri f. nagariensis]
 gi|300257275|gb|EFJ41526.1| kinesin-like protein with TPR domains [Volvox carteri f. nagariensis]
          Length = 1209

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 96/322 (29%), Gaps = 55/322 (17%)

Query: 92   LMSIAAHNIPLARKMHSYVSQQHTFHNE---------YLVYLLEVQ--IALAERQYNIAH 140
            LM+   ++            ++     +          L  LL+ Q     AE  Y+ A 
Sbjct: 712  LMARGKYDAAEPLFRRVLEGRERALGQDHPDTLNSMCSLAGLLKAQGRFRQAEPLYSRAL 771

Query: 141  EKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-----DISPDAPWV--- 190
               E +L  Q P T   +++ L   +   G   +A+R A +AL      +  D P     
Sbjct: 772  AAQERLLGPQHPET-LASMHGLAALARAHGTYGNAERLARRALYGREVALGVDHPETLAS 830

Query: 191  TEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARSLENADKGDMI 243
               +         +  A     +  +                  LL          GD  
Sbjct: 831  ACVLAGVLKARGRYDDAAPLYERALEGRVRLLGANHPDTLTSRYLLAGLRKAQGRYGDAD 890

Query: 244  ASYHDAIESLKLC-----DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----P-H 292
            A +   +E  +        +++ +    A  L +     +A  +L +  +       P H
Sbjct: 891  AMHRAVLEQREAVLGARHPDTLSSVSALAGVLTAAGHGLEAAPLLRRALEGRERVLGPDH 950

Query: 293  PE---IANIYTHLLSENT----------VGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            P+       +  L+                   R   L   + +++ SL  ++ +    G
Sbjct: 951  PDTLHSVAAFAGLMRWRGMYDMADAWCVRALQARQRLLGADHPDTLASLNNLAVLLRCQG 1010

Query: 340  SIDQAHAKAMLAMKIAPRKEIF 361
              D+A      A++   R+ + 
Sbjct: 1011 KYDKAEQACRRALEA--RERVL 1030


>gi|260173068|ref|ZP_05759480.1| hypothetical protein BacD2_14448 [Bacteroides sp. D2]
 gi|294806337|ref|ZP_06765184.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|294446593|gb|EFG15213.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 554

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 21/112 (18%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           A      + A    +    + AT E      + SL       GD  +A+ Y  KA     
Sbjct: 388 AYQAGNIDKAESYFKKAASVNATPEVNMNLGLISLMK-----GDKAAAEAYFGKAAGTK- 441

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILL 229
               + E++   Y+   ++ RA+              +  AK++N+ +  L 
Sbjct: 442 ---ELGESMGNLYIAQGQYERAVNSFGDSKTNSAALAQILAKDYNKAKNTLA 490


>gi|291295286|ref|YP_003506684.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279]
 gi|290470245|gb|ADD27664.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279]
          Length = 245

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 29/83 (34%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A +  E  LQ       A  +L   +   G  + A R   + L ++PD       
Sbjct: 113 GDRAQARQAFEAALQADPRHFRAQTNLANLALEAGQTDEAIRLYQEVLRLNPDYALAHHN 172

Query: 194 VVQQYVLAKEWSRAITFLNQKKK 216
           +   Y    +  +A+  + Q ++
Sbjct: 173 LGAAYRKKGQIDKAVYHIKQGQR 195


>gi|167518676|ref|XP_001743678.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777640|gb|EDQ91256.1| predicted protein [Monosiga brevicollis MX1]
          Length = 609

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G    A     KA+ +  +  ++    V    L  + + A   L+   +   +     
Sbjct: 413 QTGRQAEAFADFEKAIAMEKNTSYIPYIHVVLKALQTDPAAAGQLLDSALEKFSDV---- 468

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           AI+   +     + G + A+     ++L +  +S  A +     LI Q K R+ + ++E+
Sbjct: 469 AIMHQFKGEVLMNLGQLAAAEQAFDQALTVDPDSPNAIVNKGMVLIQQGKLREGQELIEQ 528

Query: 286 IWKVNP 291
             K++P
Sbjct: 529 ALKIDP 534


>gi|163802267|ref|ZP_02196162.1| hypothetical protein 1103602000603_AND4_17784 [Vibrio sp. AND4]
 gi|159174072|gb|EDP58882.1| hypothetical protein AND4_17784 [Vibrio sp. AND4]
          Length = 404

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 73/201 (36%), Gaps = 35/201 (17%)

Query: 173 AQRYATKALDISPDAPW-VTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           A  Y+  A+  +P+        V  VQ+ +  +++S A++ LN    + K+   +RA+LL
Sbjct: 15  AGAYSAPAIAKTPELSDRTFRTVNKVQELIATEKYSDALSKLNSALGSTKKKKYDRAVLL 74

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEK 285
                  + K D   +     E+LKL    +  +       A+  +++ + +K+   +  
Sbjct: 75  QQMGFLYSLKDDYPKAAKYFAEALKLDALPVPVAQQVRYSLAQLYLAEGQFKKSVNTMNT 134

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA- 344
            +K+               E                     + + ++   +++     A 
Sbjct: 135 WFKI----------AETTEEKPQ----------------AHAYITLASAYIQLQDYRNAI 168

Query: 345 -HAKAMLAMKIAPRKEIFLLL 364
              K  +AM   P +  + LL
Sbjct: 169 PPTKKAIAMTKNPSESWYQLL 189


>gi|146338344|ref|YP_001203392.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278]
 gi|146191150|emb|CAL75155.1| conserved hypothetical protein; Putative TPR repeat domain
           [Bradyrhizobium sp. ORS278]
          Length = 576

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 21/160 (13%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISP-------DA 187
           ++A ++    L+       A   L   +      + ++A   A KA  +SP         
Sbjct: 425 DVAGDRYNAALKRNPNESLAW--LMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYYYE 482

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                A+      A  +  A+    +   ++ +  +  RA       L   ++     + 
Sbjct: 483 SLSATALF----AADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEE-----AR 533

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             A E L+   +  + +             R+    L+  
Sbjct: 534 IAAAEILRRQPDFTVETYLRGHPAGDYEFGRRVAAALKGA 573


>gi|48105896|ref|XP_396019.1| PREDICTED: protein unc-45 homolog A [Apis mellifera]
          Length = 942

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 9/105 (8%)

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
              W  +  ++       WS A+T      K A + N  +A     R+     + +   +
Sbjct: 9   AHEWKEKGNIEF--NKGNWSEALTCYTSALKLADKDNSEKATYYKNRAATYLKQEEYNKA 66

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
             D  E+LK+C N         K+L  + +  +A    E+ ++  
Sbjct: 67  IKDCDEALKICPNDP-------KALFRRCQALEALERFEEAYRDA 104


>gi|18401882|ref|NP_566609.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
           thaliana]
 gi|11994105|dbj|BAB01108.1| unnamed protein product [Arabidopsis thaliana]
 gi|14335158|gb|AAK59859.1| AT3g18420/MYF24_13 [Arabidopsis thaliana]
 gi|18655375|gb|AAL76143.1| AT3g18420/MYF24_13 [Arabidopsis thaliana]
 gi|21592430|gb|AAM64381.1| unknown [Arabidopsis thaliana]
 gi|332642574|gb|AEE76095.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
           thaliana]
          Length = 316

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 6/139 (4%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + SL  +    G+   A +   + +   P+       + +          A     +  +
Sbjct: 121 LRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQ 180

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASY-HDAI---ESLKLCDNSIMASICAAKSLIS 272
                    A+   A  ++ + +G+ +     DA+   E+  L   +    +  A+    
Sbjct: 181 RNPL--SFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFL 238

Query: 273 QNKKRKAEVILEKIWKVNP 291
           Q    +A    E++ K +P
Sbjct: 239 QKNVDEALKSYEQLTKEDP 257


>gi|195168880|ref|XP_002025258.1| GL13392 [Drosophila persimilis]
 gi|194108714|gb|EDW30757.1| GL13392 [Drosophila persimilis]
          Length = 680

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 26/250 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176
            +    +++++ A    +  L       T+E    +      + GD +       S ++Y
Sbjct: 245 ARFEEGQKEHDRARIIYKYALDHLPKERTKEL-FKAYTIHEKKYGDRDGIEDVIVSKRKY 303

Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230
              + +  +P         ++      E         +   N    N     R    L I
Sbjct: 304 QYEQEVAANPTNYDAWFDYLRLIEADGEKDLIRDTYERAIANVPPANEKNYWRRYIYLWI 363

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L L            +  A+  I   + ++A   L  
Sbjct: 364 NYALYEELEAEDTERTRQIYKTCLDLMPHKQFTFSKVWLLYAQFEIRCKELQRARKTLGF 423

Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              + P  ++   Y  L     E    +L    +  E   E+  + +  +++   +G  +
Sbjct: 424 AIGMCPRDKLFRGYIDLEIQLREFERCRL-LYEKFLEFGPENCVTWMKFAELENLLGDTE 482

Query: 343 QAHAKAMLAM 352
           +A A   LA+
Sbjct: 483 RARAIFELAV 492


>gi|94969715|ref|YP_591763.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551765|gb|ABF41689.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 613

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 19/133 (14%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENT-VGKLKRALRLEEI 320
           AK   ++++  KAE  L    +++P+ +        IY     E   +  ++R   L   
Sbjct: 127 AKVYSARSQLDKAEATLWHALELDPNLDNGFAWYTAIYRDRGGEAAGLDAMRRIAAL--- 183

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLA---MKIAPRKEIFLLLAQIEQANSHNTDK 377
              S  + + +++ AL+    + A A+   A   +  +P  ++ +L++  +     + + 
Sbjct: 184 -PGSWRAQLSLARAALDANDFNAAMAQYGDAFSRLSASPTTQMLMLVSG-DLGQHGHPEI 241

Query: 378 ILYWTQSALHAMP 390
                  AL A  
Sbjct: 242 -----ALALTAPH 249


>gi|255086936|ref|XP_002505391.1| mRNA splicing protein [Micromonas sp. RCC299]
 gi|226520661|gb|ACO66649.1| mRNA splicing protein [Micromonas sp. RCC299]
          Length = 930

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 77/240 (32%), Gaps = 42/240 (17%)

Query: 163 ESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           E  + G  ++A+     A  + P     WV  A +++ V       A+  L +   +   
Sbjct: 528 ECEKRGSTHTARAILAHACGVFPAKKGLWVLAAKLEKSVGDSAAMDAL--LKRAVVHCPR 585

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                 +L +  + E    GD+  +     E+  +  +S    + A K      +  +A 
Sbjct: 586 AE----VLWLMAAKERWLCGDVPGARDVLEEAFVVNPDSEDIWLAAFKLEFENREPERAR 641

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
           V+L K                        ++                 +  + +  E+G 
Sbjct: 642 VLLAK--------------IREKEGGASERV----------------WMKSAIVEREVGD 671

Query: 341 IDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD--PLWISD 397
           + +        ++  P   +++L+L Q+E+A   + D              D  PLW + 
Sbjct: 672 VAEERRMLAGGLEKFPTAWKMWLMLGQLEEAQ-GDVDAARTAYTKGCRRCHDAIPLWTAA 730


>gi|169607847|ref|XP_001797343.1| hypothetical protein SNOG_06985 [Phaeosphaeria nodorum SN15]
 gi|111064516|gb|EAT85636.1| hypothetical protein SNOG_06985 [Phaeosphaeria nodorum SN15]
          Length = 680

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 103/336 (30%), Gaps = 51/336 (15%)

Query: 137 NIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDLN--------SAQRYATKALDISPD 186
             A    +  L   P ++   ++  + +  +  GD +          + +  + +  +P 
Sbjct: 260 ERARAIYKFALDRMPRSKSVNLHKAFTQFEKQFGDRDGIEDVILSKRRVHYEEQVKENPK 319

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENADKG 240
                    +    +    R      +        +  + W R   + L     E     
Sbjct: 320 NYDAWIDFARLEETSGNTDRVRDVYERAIAQIPPTQEKRHWRRYIYLWLFYAVFEETVSR 379

Query: 241 DMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
           D+  +     E ++L            +  A   + QN+   A  +L +   + P  ++ 
Sbjct: 380 DVERTRQIYQECIRLLPHKRFTFAKVWLMFAHFEVRQNQLTTARKLLGQAIGMCPKDKLF 439

Query: 297 NIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             Y  L  E  + +  R  +L     E N  + ++ +  +++   +  +D+A A   LA+
Sbjct: 440 KGYIEL--EMKLFEFGRCRQLYTKYIEWNGSNCQTWIKFAELERGLDDLDRARAIFELAV 497

Query: 353 KIAPRKEIFLLL----AQIEQANSHNTDKILYWTQSAL-HAMPDPLWISDDGYLSSVWLP 407
              P+ ++  LL       E+      D+     +  L       +W          W  
Sbjct: 498 D-EPQLDMPELLWKAYIDFEEGE-GEYDRTRALYERLLQKTDHVKVWT--------SWA- 546

Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAY 443
                     FE  +P +  E  + +      E A 
Sbjct: 547 ---------QFELSVPDEGDETAAEDEDRPVSEAAK 573


>gi|159477305|ref|XP_001696751.1| PsbB mRNA maturation factor [Chlamydomonas reinhardtii]
 gi|20532161|sp|Q9FNS4|MBB1_CHLRE RecName: Full=PsbB mRNA maturation factor Mbb1, chloroplastic;
           Flags: Precursor
 gi|11990205|emb|CAC19558.1| Mbb1 protein [Chlamydomonas reinhardtii]
 gi|158275080|gb|EDP00859.1| PsbB mRNA maturation factor [Chlamydomonas reinhardtii]
          Length = 662

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 78/270 (28%), Gaps = 33/270 (12%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRN 224
           R G++  A++    A+ +                    ++RA    +   ++  ++    
Sbjct: 208 RTGNVERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQ 267

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAEVI 282
            A L  A     A  G +  +     E  +  + +   ++    A     Q        +
Sbjct: 268 NAYLYNALGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYL 327

Query: 283 LEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
             K    NP     H  +A         N    L    R  E+N          + +  +
Sbjct: 328 FRKALGANPRSRYVH--LAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQ 385

Query: 338 MGSIDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDP 392
            G I++A       ++  P      + + ++    +A   N D+     Q  + A    P
Sbjct: 386 AGRIERARELFEQGLRADPSDLYMWQAYGVM----EAEQGNMDRARQLFQEGVWADPRSP 441

Query: 393 LWISDDGYLSSVWLPLSPISKTLCYFEWKI 422
             +    Y+   W             EW+ 
Sbjct: 442 STV----YVFHAW----------GALEWQA 457


>gi|114320406|ref|YP_742089.1| type IV pilus biogenesis/stability protein PilW [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226800|gb|ABI56599.1| type IV pilus biogenesis/stability protein PilW [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 252

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 62/204 (30%), Gaps = 7/204 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            L E +Y  A+ +LE  L I      A  ++     ++G    A R+  +A+ +  +   
Sbjct: 47  YLQEGEYEEANRRLERALDIDRRYAPAHAAMALLQEQLGQPEEAGRHYRRAVRLDGENAS 106

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
                 +      +  RA+        N    N +  I L    +    +G    +    
Sbjct: 107 TRNNYGRFLCEQGDLDRALDQFEAALDNPLYRNPH--IPLANAGVCLMREGQHERAEDYF 164

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE---IANIYTHLLSE 305
           + SL+       A +  A+          AE  L +      H P    +       + +
Sbjct: 165 LRSLRENARFAPALLRMAQLRFQAGDHEGAEEYLNRYRAEAQHTPASLWLGVQLARAVGD 224

Query: 306 NTVGKLKRALRLEEINKESVESLV 329
                      L     +S E+ +
Sbjct: 225 ADAEASYGL-SLRNRFPDSREARL 247


>gi|315320485|ref|YP_004072541.1| photosystem I assembly protein Ycf3 [Thalassiosira oceanica
           CCMP1005]
 gi|283568958|gb|ADB27495.1| photosystem I assembly protein Ycf3 [Thalassiosira oceanica
           CCMP1005]
          Length = 184

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 51/150 (34%), Gaps = 30/150 (20%)

Query: 126 EVQIALAERQYNIA-HEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALD 182
               A AE  Y  A     E +        R + +Y++     +  +   A  Y  +A+ 
Sbjct: 37  AGMAAQAEGDYAEALENYYESLYLDEDQYDRSYTLYNIGLIYGKNENYPRALEYYHQAVS 96

Query: 183 ISPDAPWV---------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           ++ + P            + ++   + ++++  A+         ++E+        +  +
Sbjct: 97  LNSNLPQALNNIAAIYHRQGLLALEMASQDYDSAMEI-------SEEYE------YVELA 143

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMAS 263
               DK     +     ++LKL  ++   +
Sbjct: 144 KGLFDK-----AAEYWYQALKLAPDNYPRA 168


>gi|331242659|ref|XP_003333975.1| hypothetical protein PGTG_15705 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309312965|gb|EFP89556.1| hypothetical protein PGTG_15705 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1109

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 10/105 (9%)

Query: 214  KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
              + A+  N   A L +   L +    ++  +     ++L   D  I A +  A+ L  Q
Sbjct: 982  AIQEAETLNGESAELWVQYGLYSLSISELSQAIDCLTKALAFSDQHIPAVVHMARILKEQ 1041

Query: 274  NKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                 AE +L+       W V   PE   + + +      G+LKR
Sbjct: 1042 GSVELAEGLLDLLTQTVAWDV---PEAWYLLSEIYL--ATGRLKR 1081


>gi|294647939|ref|ZP_06725491.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|292636847|gb|EFF55313.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
          Length = 558

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 21/112 (18%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           A      + A    +    + AT E      + SL       GD  +A+ Y  KA     
Sbjct: 392 AYQAGNIDKAESYFKKAASVNATPEVNMNLGLISLMK-----GDKAAAEAYFGKAAGTK- 445

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILL 229
               + E++   Y+   ++ RA+              +  AK++N+ +  L 
Sbjct: 446 ---ELGESMGNLYIAQGQYERAVNSFGDSKTNSAALAQILAKDYNKAKNTLA 494


>gi|239908071|ref|YP_002954812.1| hypothetical protein DMR_34350 [Desulfovibrio magneticus RS-1]
 gi|239797937|dbj|BAH76926.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 186

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 2/112 (1%)

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
             A K   ++P      + V    V  + W+  I  L +   N         + L  R  
Sbjct: 21  ALAKKHAAVNPINADYAKGV--AAVNDRHWNDGIALLTKVIDNPATPKELVPLALTNRGT 78

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             A+K     +  D  +++ L  +   A    A+ L  QNK  +A   L K 
Sbjct: 79  AYANKKMTAEALADLDKAINLNPDYTAAYYDRARILAMQNKHAEAVADLTKA 130


>gi|170062990|ref|XP_001866910.1| TPR repeat-containing protein [Culex quinquefasciatus]
 gi|167880758|gb|EDS44141.1| TPR repeat-containing protein [Culex quinquefasciatus]
          Length = 1128

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 81/257 (31%), Gaps = 12/257 (4%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    ++    +   A   +     +   +    V L      L       A    +  L
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFLKMNNQEKAKLAFQRAL 224

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQ---RYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            +      A+  L      + +  S +   +  +KA  I    P V   +   +   K++
Sbjct: 225 DLDPACVGALVGLAILKLNLHEPESNRLGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 284

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS 263
            + +  L     +  E    RA      +     + D   ++    +S +    N ++  
Sbjct: 285 QK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQFAPVNFVLPH 343

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317
               +  I +     A    EK+ K  P        + ++Y    S++     K    ++
Sbjct: 344 FGLGQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSLYASSSSQSKRDIAKNHLKKV 403

Query: 318 EEINKESVESLVIVSKI 334
            E   + VE+ + +++I
Sbjct: 404 TEQFPDDVEAWIELAQI 420


>gi|123441416|ref|YP_001005403.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088377|emb|CAL11168.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 249

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+     A + LE  +        A   + F   RIG+ ++A++   +A+
Sbjct: 35  TRLQLGLEYLAQGDLTAARQNLEKAVAADPQDYRAQLGMAFYEQRIGENDAAEQRYQQAM 94

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +    +        ++         A++ D
Sbjct: 95  KLAPGNGTVLNNYGAFLCSLGQYVPAQQQFSAAVLSPDYGQVADSLENAGYCFLRANQND 154

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 155 --QARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194


>gi|219850494|ref|YP_002464927.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
           DSM 9485]
 gi|219544753|gb|ACL26491.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM
           9485]
          Length = 414

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 7/128 (5%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           Y L FE  +     +A     +A+   P       A+   Y      ++A          
Sbjct: 16  YGLAFERTQR--PLAALEQFRRAIAADPTMRDAHNALAFHYQQQGLLAKAADTFAAVATL 73

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A ++  +  +  +   LE  D+ +           L+L  N   A +  A    ++ +  
Sbjct: 74  ADDYFAHFNLGFVLIELERYDEAEREFQR-----CLELDPNDTAAQLELAYIYAARGEYA 128

Query: 278 KAEVILEK 285
           KA  +LEK
Sbjct: 129 KAVTMLEK 136


>gi|116250899|ref|YP_766737.1| adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255547|emb|CAK06624.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 634

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 22/211 (10%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQYVLAKEWSR----AITFLNQ 213
                   + A+    +A+D+ P+       +     +        WS     ++    +
Sbjct: 398 HRLTRQTNSDARDLLQRAVDLDPNFASAHAFLALTHGLDYL---NRWSALPQRSLEQAEE 454

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
               A   + +  +   A SL +        +  +A  ++ L  N     +   ++LI  
Sbjct: 455 VATLAVARDDSDPVAHWALSLVSLYLRQHDRAISEAERAIVLNPNFAEGHVSLGEALIYS 514

Query: 274 NKKRKAEVILEKIWKVNPH-PEI------ANIYTHLLSENTVGKLKRALRLEEINKESVE 326
            +  +A    ++   +NP+ P+I        ++     E  V  L   L+    N  +  
Sbjct: 515 GRSGEALAYFDRASVLNPYFPDIVLHFQALALFQLGRYEEAVELL---LQRVSRNPVTDV 571

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           S  +++     +G  ++A A     M++ P 
Sbjct: 572 SRALLAACYGHLGRFEEARATWQEVMRVNPD 602


>gi|23016026|ref|ZP_00055787.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 510

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 14/209 (6%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-----QKKK 216
            +    G    A   A   L   P    +   +    +   +   AI  +          
Sbjct: 11  VQFMSQGRPADAAGTAEALLSTQPGNARLWHLLGCARLQLGQVDEAIRTIRHSVSLDASN 70

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A   N  RA+L    +   A++ D  AS   AI +     +     +  A+ L +  + 
Sbjct: 71  PATHANLARALLAKNSA---AERKDAEASIRCAIAAGPNDLSFR---LTLAEILQADRRY 124

Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSK 333
            +A   L +   + P HP+IA      L  +      L    ++   N   V + +    
Sbjct: 125 PEAVAELRQALALAPAHPDIAATLASALHLAGEADQALSLCDQVLAANPGHVGAWINRGN 184

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             L  G +  A A    A+ +AP  ++  
Sbjct: 185 ANLLKGDVAAARAALDQAVALAPDNKLAR 213


>gi|332530782|ref|ZP_08406709.1| TPR domain protein [Hylemonella gracilis ATCC 19624]
 gi|332039769|gb|EGI76168.1| TPR domain protein [Hylemonella gracilis ATCC 19624]
          Length = 474

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 26/188 (13%)

Query: 155 FAVYSLYFESCRI-GDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFL 211
            A++     +    GD  +A  +  +AL + P+    W+   V+            +   
Sbjct: 46  AALHGNLALALDEAGDAQAADHHYRQALALEPEQAQLWINHGVLLLQGKR------LAEA 99

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
               + A       A  L    +  A +     +      +L+L      A+      L+
Sbjct: 100 EAALRQALALAPQDASALSNLGVLLAQQYRDEEAETTMRTALRLHPTYRNAAYNLGYLLL 159

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            Q +       LE+ W      +               +L R L       E ++   ++
Sbjct: 160 RQGR-------LEEGWLRLEQRD--------RHGALAERLARQLPCPRWQGEPLQGRSLL 204

Query: 332 SKIALEMG 339
             IALE G
Sbjct: 205 --IALEAG 210


>gi|311103458|ref|YP_003976311.1| tetratricopeptide repeat family protein 1 [Achromobacter
           xylosoxidans A8]
 gi|310758147|gb|ADP13596.1| tetratricopeptide repeat family protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 826

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 95/283 (33%), Gaps = 51/283 (18%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMH-----SYVSQQHTFHNEYLVYLLEVQIALAERQY 136
           D+G +AL  G +  AA     A ++      + V  Q  F        L V+ AL    +
Sbjct: 538 DEGDRALEEGRLRDAA-ERICAHRLLTPDALAGVRAQRAFER---AMRLGVRAALVAGNH 593

Query: 137 NIAHEK--LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               +   + +  QI      A+      +  +GD  +A R+  +A      AP+ T+  
Sbjct: 594 KEVIDLTDIALDTQIDFPELHAMRG--RAADALGDKQTAMRHLEQAAA-GDAAPFSTKLH 650

Query: 195 VQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +      W   AI        +                     +G   ++     E+ 
Sbjct: 651 FARVAFNGGWYGEAIDAYKTVLGH---------------------EGADQSARD---EAE 686

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---------PEIANIYTHLL- 303
           +        +I  A+ ++S    + A  +L+++ +  P            +A +Y     
Sbjct: 687 RQLGRLGPRAIRGAREILSAGDHQAAWNLLDRVAQSWPAMTEVDHEKRRILAVLYAESRA 746

Query: 304 --SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               +T  +L    R+ ++  +    L + +  A+ +   +QA
Sbjct: 747 LDPASTTERLALGERIVKLVPDDPIGLRLAAVGAMRLHRFEQA 789


>gi|297155303|gb|ADI05015.1| hypothetical protein SBI_01894 [Streptomyces bingchenggensis BCW-1]
          Length = 359

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 70/208 (33%), Gaps = 16/208 (7%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +  K +  A   L ++     +  R    L           G +  +     E+L+ 
Sbjct: 11  DVLIELKRYDEAAALLGRRLAEEPDDVRAWVRL----GRCQVVAGQVEQALTSLGEALQR 66

Query: 256 CDNSIMASICAAKSLISQN------KKRKAEVILEKIWKVNPHPEIANI----YTHLLSE 305
               + A    A++L   +      + RKAE  L +  +V+P    A+     +      
Sbjct: 67  APEDLGALCMYAQALRRADHLEQPERWRKAEEALRQALRVDPQNSFAHALLAEFLMYYPT 126

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
             +  L  A     ++ ESV++   + + A   G  +         +++ P     L L 
Sbjct: 127 RRLEALDLAKEAVRLDPESVDAYQALWRTAGAAGETETYKWALRQVLRLDPTNNQALYLV 186

Query: 366 QIEQANSHNTDKILYW--TQSALHAMPD 391
            +++A+   T           AL A PD
Sbjct: 187 SMQEAHKPGTTAAQAAEVYADALAAAPD 214


>gi|294670383|ref|ZP_06735265.1| hypothetical protein NEIELOOT_02101 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307847|gb|EFE49090.1| hypothetical protein NEIELOOT_02101 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 186

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 48/165 (29%), Gaps = 2/165 (1%)

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEYLV 122
              + PA L      R   K    L    ++        A +  + V +      +  L 
Sbjct: 3   GLFNIPARLSRFGSARKSRKAGSNLNAAGLAYFEGKYQKAEQEAAKVLKNKEAGESRALA 62

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKAL 181
            ++    A       +    L+ +  +P   + + Y L  E +    D   A      A 
Sbjct: 63  LMIAAHAADHMNDEALCARYLDEISALPQANQLSRYLLLAEGALNRRDYPEASSNLAAAA 122

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            I+P    +    ++      + +  +   ++ +         RA
Sbjct: 123 KINPRLTRLLRLQLRYAFDHGDAAEVLDKTDELQNKKPSIRMKRA 167


>gi|240115949|ref|ZP_04730011.1| hypothetical protein NgonPID1_06839 [Neisseria gonorrhoeae PID18]
 gi|260440238|ref|ZP_05794054.1| hypothetical protein NgonDG_03956 [Neisseria gonorrhoeae DGI2]
          Length = 555

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 148 ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 204

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 205 RLL---LEAGRFYAEDNQNKESAAAFEKV 230


>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
          Length = 635

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 53/163 (32%), Gaps = 16/163 (9%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPAT 152
           A H + L R +H+Y  +     + Y+   L    A      + A    + M     +P T
Sbjct: 142 ACHGLALGRALHAYAFKLALAGDSYVATALLGMYAR-GGDADAARALFDEMPDPHVVPVT 200

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV-TEAVVQQYVLAKEWSRAITFL 211
                Y              A   A +  D  P   ++   A++  Y      + A+   
Sbjct: 201 AMLTCY----------AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLF 250

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               ++  + +   AI+L   ++      +     H  +++ +
Sbjct: 251 RWMLRSGVDPD-EVAIILALSAVAQLGTAESGRWLHSYVKNSR 292


>gi|119897095|ref|YP_932308.1| hypothetical protein azo0804 [Azoarcus sp. BH72]
 gi|119669508|emb|CAL93421.1| hypothetical protein azo0804 [Azoarcus sp. BH72]
          Length = 211

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 1/120 (0%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
           G + A+    I +L+    ++ A    A  L+ Q     A        +V+P   +A+  
Sbjct: 39  GQLDAARAHYIHALRQAPTAVEARNGVAVVLLRQGDAAGAASWFRAALEVSPDDPVAHAA 98

Query: 300 TH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            + L +E       R  RL   + ++    + +  +        +A      A    P +
Sbjct: 99  LYSLGAETAPASEDRLRRLLGRHPDAAALYLALGNLLARQDRWAEAQDAYFRAYTFNPDE 158


>gi|86750910|ref|YP_487406.1| TPR repeat-containing protein [Rhodopseudomonas palustris HaA2]
 gi|86573938|gb|ABD08495.1| TPR repeat protein [Rhodopseudomonas palustris HaA2]
          Length = 713

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 46/143 (32%), Gaps = 4/143 (2%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            E ++ L+  ++     QY+ A    + +L+       A++ L     + G  ++  R  
Sbjct: 19  YEPVLLLMRARVMHQAGQYDEAKSAYKKVLKKSPNNFQALHFLGLAEFQTGHFDAGIRSL 78

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL   P +      +      A+ +  A+   ++            A     R     
Sbjct: 79  KRALIEDPKSAQAQSDLGSVLNAAQRYDEALVACDKAIALDPAL----AFAHANRGNVLI 134

Query: 238 DKGDMIASYHDAIESLKLCDNSI 260
             G    +      +L+L  +  
Sbjct: 135 TLGRYDEAVASLDRALELVPDHT 157


>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
          Length = 634

 Score = 38.4 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 53/163 (32%), Gaps = 16/163 (9%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPAT 152
           A H + L R +H+Y  +     + Y+   L    A      + A    + M     +P T
Sbjct: 141 ACHGLALGRALHAYAFKLALAGDSYVATALLGMYAR-GGDADAARALFDEMPDPHVVPVT 199

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV-TEAVVQQYVLAKEWSRAITFL 211
                Y              A   A +  D  P   ++   A++  Y      + A+   
Sbjct: 200 AMLTCY----------AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLF 249

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               ++  + +   AI+L   ++      +     H  +++ +
Sbjct: 250 RWMLRSGVDPD-EVAIILALSAVAQLGTAESGRWLHSYVKNSR 291


>gi|327540785|gb|EGF27351.1| ASPIC/UnbV domain-containing protein [Rhodopirellula baltica WH47]
          Length = 980

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/114 (9%), Positives = 30/114 (26%), Gaps = 4/114 (3%)

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            M+Q        +      +      + A+    K +D  P+                +W
Sbjct: 152 EMVQRNPDDLRPLIGAARSALDQNLFDEARDSLDKIVDRHPNYATAAAMRSLLLAEQADW 211

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                 L     +       R     A  + +    +  ++    +++ +L  +
Sbjct: 212 ----KTLESSLASLPAEVTQRRHFWTAMGMWSESVNNAGSAARAYLQAAQLDPD 261


>gi|323451579|gb|EGB07456.1| hypothetical protein AURANDRAFT_64890 [Aureococcus anophagefferens]
          Length = 1452

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 19/210 (9%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCR---IGDLNSAQRY 176
           LV LL    A       ++    +  +Q   T +E   Y++Y  +      G+   A   
Sbjct: 3   LVLLLAATTA-VADDEIVSIVTTKEGVQRSITAKEVDAYAIYNAAVASQVRGEYARAVAE 61

Query: 177 ATKALDISPDAPWVTEAVVQQYVL-----AKEWSRAITFLNQKKKNAK----EWNRNRAI 227
             +AL I+P  P     +   Y         + ++A     +    A            +
Sbjct: 62  FEEALAIAPALPEALINLGNAYSDLANDGVSDVAKAAACYERAIAAADHPKIVAQAESNL 121

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
             +       D   +  +      ++    +   A       L    +   A    E+  
Sbjct: 122 GHLLSRNAARDVAKLEVARGHLERAIAADPDFPDAHFNYGIVLDGLGRVEDARAAYERTM 181

Query: 288 KVNPHPE-----IANIYTHLLSENTVGKLK 312
            + P  E     +AN Y      +   +++
Sbjct: 182 ALAPAHENARLNLANTYFTEGDSDAAARIQ 211


>gi|318606743|emb|CBY28241.1| type IV pilus biogenesis protein PilF [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 249

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+     A + LE  +        A   + F   RIG+ ++A++   +A+
Sbjct: 35  TRLQLGLEYLAQGDLTAARQNLEKAVAADPQDYRAQLGMAFYEQRIGENDAAEQRYQQAM 94

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +    +        ++         A++ D
Sbjct: 95  KLAPGNGTVLNNYGAFLCSLGQYVPAQQQFSAAVLSPDYGQVADSLENAGYCFLRANQND 154

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 155 --QARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194


>gi|284054205|ref|ZP_06384415.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 340

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 63/187 (33%), Gaps = 13/187 (6%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYS-LY 161
           R + +++       +  ++     +    +  +  A +  +  ++  P      ++S L 
Sbjct: 3   RAIAAFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALDCFQKVLILAPE--FPGIHSDLA 60

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-------ITFLNQK 214
           +    + D   A  +  +A+              ++  +      A       +  LNQ 
Sbjct: 61  WSLMELADFPEAIAHLKEAIKGQEFLLTAYITESEKQAVDGSLGEAQKACAQLLQALNQN 120

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +       +    + ++L  A+  +  ++     ++LKL  +   A +     L  Q 
Sbjct: 121 DISVSVITLAQTYFHLGQAL--AEYQNFGSAEQYYQKTLKLQPDFTAAHLAWGDILREQG 178

Query: 275 KKRKAEV 281
           + ++A+ 
Sbjct: 179 RLKEAQK 185


>gi|224823789|ref|ZP_03696898.1| Tetratricopeptide TPR_2 repeat protein [Lutiella nitroferrum 2002]
 gi|224604244|gb|EEG10418.1| Tetratricopeptide TPR_2 repeat protein [Lutiella nitroferrum 2002]
          Length = 595

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 99/290 (34%), Gaps = 17/290 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++ +  + +A +  +   +     +     LL     L   +   +   +E +L+    R
Sbjct: 116 ALFSGQLKVASEALTLWVELDPDSDIAREQLLI--TLLRSGKLAESRPLVEELLKREPAR 173

Query: 154 EFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             AV   L   +   GD   A +   +  +  PD P    AV+         S A   L+
Sbjct: 174 AGAVFVQLARLTALQGDKQGAYQLIQQLAERYPDLPEARFAVLAVAAEVGNESVAEQELD 233

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLI 271
           +  + A +W+     L +A   +   + D+ A+     + L    ++ +    A  + L+
Sbjct: 234 RLARIAPKWD-----LPVAWQTDRLRRSDLNAAIAFLKKELDRRPDAGLELKMAYPRLLV 288

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK----LKR--ALRLEEINKESV 325
              +  +A    E + +    P+ A +           +     KR     L E + ES 
Sbjct: 289 GAKRFDEARRAFEALLQTQ--PKNAELLYGAGLLALQQRDLPVAKRHLEAALAEKHPESD 346

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375
                + ++A E   +  A        + A        LA+++ A  +  
Sbjct: 347 FIRYTLGQLAEEQDDVPGARRWYEAVGQGAQYLPAQGRLAELDAAAGNPD 396


>gi|42783524|ref|NP_980771.1| TPR domain-containing protein [Bacillus cereus ATCC 10987]
 gi|206976074|ref|ZP_03236984.1| TPR domain protein [Bacillus cereus H3081.97]
 gi|217961885|ref|YP_002340455.1| TPR domain protein [Bacillus cereus AH187]
 gi|222097838|ref|YP_002531895.1| tpr domain protein [Bacillus cereus Q1]
 gi|229141132|ref|ZP_04269674.1| TPR domain protein [Bacillus cereus BDRD-ST26]
 gi|229198522|ref|ZP_04325226.1| TPR domain protein [Bacillus cereus m1293]
 gi|42739453|gb|AAS43379.1| TPR domain protein [Bacillus cereus ATCC 10987]
 gi|206745826|gb|EDZ57223.1| TPR domain protein [Bacillus cereus H3081.97]
 gi|217064935|gb|ACJ79185.1| TPR domain protein [Bacillus cereus AH187]
 gi|221241896|gb|ACM14606.1| TPR domain protein [Bacillus cereus Q1]
 gi|228585025|gb|EEK43139.1| TPR domain protein [Bacillus cereus m1293]
 gi|228642410|gb|EEK98699.1| TPR domain protein [Bacillus cereus BDRD-ST26]
          Length = 219

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 19/205 (9%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + E  +  A +     ++          +       +GD   A  +  +AL++   +  
Sbjct: 11  YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               +   Y   ++++ A     Q  +         A +     + +   G+   +    
Sbjct: 71  AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126

Query: 250 IESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300
             + +L +N + A     +C A+    Q  K   E +LE       H   A+ Y      
Sbjct: 127 QRATELDENDVEALFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180

Query: 301 HLLSENTVGKLKRALRLEEINKESV 325
           ++  E     L    +  EI  +  
Sbjct: 181 YVFEEKNEKALALFKKATEIQPDHF 205


>gi|56421604|ref|YP_148922.1| hypothetical protein GK3069 [Geobacillus kaustophilus HTA426]
 gi|56381446|dbj|BAD77354.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 490

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 104/328 (31%), Gaps = 47/328 (14%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE-KLEMMLQ 148
            G+ +    ++  ARK      +      +    L    +     +Y  +++   +++  
Sbjct: 27  KGMKAYDRGDLEKARKYFERAVRLD--ERDASFALQLALVLSELGEYQFSNQWLFKIIHD 84

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAK-EWS 205
           +  T    +Y L      +G    A++YA + L   P   +  +A  +++   L   EW+
Sbjct: 85  LDETMYDCLYFLANNFACLGLFREARQYAERYLAHEPAGEFADDAADLLELLRLDGSEWT 144

Query: 206 RAITFL----NQKKKNAKEWNRNRAILLIAR---------------SLENADKGDMIASY 246
                L    ++ ++  +E     AI  +                 +L     GD+  + 
Sbjct: 145 EEEEQLMVLEDRARRLLEEERFAEAIEALEALVVRYPDVWSAHNNLALAYFYSGDVDKAK 204

Query: 247 HDAIESLKLCDNSIMA---SICAAKSLISQNKKRKAEVILEKIWK--VNPHPEIANIYTH 301
               E LK    ++ A   ++  A  L  + +      +L  ++        ++   +  
Sbjct: 205 QKVREVLKRDPGNLHALCNALVFAYYLREEEQAAALCEMLAGLYPFFREHQYKLGATFAL 264

Query: 302 LLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE- 359
           +   +   + L R  + +    +       ++  A   G    A     +   + P K  
Sbjct: 265 VGRFDLAFRWLHRLYK-QGFGGDGPF-YYWLACAAYYTGHEPLARQMWEVLATLHPEKRG 322

Query: 360 -------------IFLLLAQIEQANSHN 374
                        +  L+A +E     +
Sbjct: 323 EEPWAVSAPVDEALIRLMAWLEGDELAD 350


>gi|251773390|gb|EES53939.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 1156

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 80/272 (29%), Gaps = 66/272 (24%)

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFA----VYS------ 159
               +     L V+ ++   +        + +L +     PA          +       
Sbjct: 564 LLPADPQGLALLVRDSIWAGREKKVLAYYQRLLSLDPDSLPALAFLGDHAYYHGHFRRAI 623

Query: 160 -LYFESCRIGDLNSAQRY--------------ATKALD-----ISPDA------------ 187
            LY  +   GD + A  Y              A +        +SP              
Sbjct: 624 RLYRRAVSHGDTDYALVYRLGSAFRQVRNFRMARRMFRLSWKLLSPGLPGKVAQKKAGEP 683

Query: 188 ------PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                 PW   +++    L    S      +    +     R    + I  +L     G 
Sbjct: 684 QSWIRAPWAGRSLLVDQPLIP--SPLPPPPDAGMSDETTRRRLLYAIKIQHAL-----GH 736

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
              +Y   ++ L+   +       AA+ L  + K  KA   L + W    HP+  + +  
Sbjct: 737 DREAYQRTMDFLRRFPDDREGLFWAARLLWKERKGEKALRYLGR-WLAR-HPDSKD-FLV 793

Query: 302 LLSE--NTVGKLKRALRLE-EINKESVESLVI 330
             +E     G+L  A RL   ++K+  E  VI
Sbjct: 794 FRAEILTATGRLATAQRLLWRLHKKYPEDKVI 825


>gi|218666334|ref|YP_002426340.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218518547|gb|ACK79133.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 249

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +A  Y  L   +     L RAL L         +L++++++    G  D A A   + + 
Sbjct: 140 LAQAYAGLKDLSAARDALDRALYLV---PNYPPALLMLAELDYNDGKADAAFAHLQVVLA 196

Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
             P     LLLA    A    T +     Q  + A P
Sbjct: 197 QEPDNADALLLAGRIAALQGRTTQAQSLWQRCVTASP 233


>gi|188535499|ref|YP_001909296.1| Cellulose synthase operon protein C [Erwinia tasmaniensis Et1/99]
 gi|188030541|emb|CAO98436.1| Cellulose synthase operon protein C [Erwinia tasmaniensis Et1/99]
          Length = 1345

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 52/176 (29%), Gaps = 8/176 (4%)

Query: 118 NEYLVYLLEVQIALAERQYNIA---HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174
            E L Y+L  Q   AE    +A       E +   P      +     +    GD   A 
Sbjct: 421 REGLFYVLRQQNRTAEANTLLASLPASVREAVTPRPVASSAPLRHEAQQRLAAGDAQRAI 480

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
               + L   P+  W+   + + Y      + A   +    +     +   A  L+A   
Sbjct: 481 GILQQGLQRFPNDGWLRLDLARIYQQQGNTAAAADVMQPAFRPGAGSSEIYAAALLASEN 540

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEK 285
           +   +   + S     +      + +        +  A+  ++Q     A   L+ 
Sbjct: 541 DAWPQAQSLLSRIPPRDRNTDMRDLMRRVNFNQQMVVARRYLAQGSTAAAANTLKA 596


>gi|146342098|ref|YP_001207146.1| hypothetical protein BRADO5241 [Bradyrhizobium sp. ORS278]
 gi|146194904|emb|CAL78929.1| conserved hypothetical protein with a TPR motif and a caspase
           domain; putative exported protein [Bradyrhizobium sp.
           ORS278]
          Length = 556

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 43/114 (37%), Gaps = 4/114 (3%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+ + A      AL + P +  +       Y    +++ A++  ++  K +       A 
Sbjct: 108 GEDDIAIADFNDALKLGPPSATIYHNRGNAYRSKGDYAHALSDYDEAIKQSP----REAY 163

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               R +  A +GD+  +  D  E+++L  +   A    +    ++    +A  
Sbjct: 164 SWQNRGITKAAQGDLDGALIDINEAIRLSPSLASAMTNRSVIWRAKGNIERAIA 217


>gi|46581416|ref|YP_012224.1| glycosyl transferase group 2 family protein [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46450838|gb|AAS97484.1| glycosyl transferase, group 2 family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311235073|gb|ADP87927.1| glycosyl transferase family 2 [Desulfovibrio vulgaris RCH1]
          Length = 568

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           + + L +G  +QA      A   +PR     L+  +  A S + +    W + AL A PD
Sbjct: 29  AVLHLRLGETEQARRLLEEATAKSPRNGAIPLVMALHLAASGDGEGADTWFRKALAAEPD 88



 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 3/142 (2%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A++  R +    +  ++ +   G+   +     E+      +    +  A  L +     
Sbjct: 14  AEDIAREQQNPTLRAAVLHLRLGETEQARRLLEEATAKSPRNGAIPLVMALHLAASGDGE 73

Query: 278 KAEVILEKIWKVNP-HPEIANIY-THLLSENTVGK-LKRALRLEEINKESVESLVIVSKI 334
            A+    K     P  PE    Y   LL ++   + L+      E+  +S+   +  +  
Sbjct: 74  GADTWFRKALAAEPDQPEALRAYGLFLLGQDATVRGLRLLRMAAELAPQSLAIGLECAGA 133

Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356
           A+  G    A   +   +  +P
Sbjct: 134 AIMCGEYHTARDMSRRILSASP 155


>gi|116749303|ref|YP_845990.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698367|gb|ABK17555.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 686

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 70/237 (29%), Gaps = 17/237 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                R+   A E     L I        Y+L     R G +  A+++  +A+ + P A 
Sbjct: 446 ALDDARRPEEAIESYRAALAISPNHAVTHYNLGLVLARRGRVEEAEKHYREAVRLQPRAS 505

Query: 189 WVTE---AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   V+ +    +E           + +    + N  +LL         KG    +
Sbjct: 506 NFRNNLGLVLGRQGKTEEAEAEYREALAIRPDYANAHNNLGVLLAQ-------KGKTEEA 558

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300
                E+L        A       L+  ++  +A        ++ P     H  +   + 
Sbjct: 559 IAHYREALAARPGYSSAHNNWGYCLMMADRVEEAIPHFIAALRLKPDDANIHANLGTAFV 618

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              + +    +        +   ++     + K+    G  D A  +    +++ P 
Sbjct: 619 KQRNPDRA--VMHFEEAIRLAPSNINVRATLGKLLAVQGKRDLASIQFKEILRLDPD 673


>gi|301062625|ref|ZP_07203257.1| ATPase, AAA family [delta proteobacterium NaphS2]
 gi|300443305|gb|EFK07438.1| ATPase, AAA family [delta proteobacterium NaphS2]
          Length = 741

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 5/101 (4%)

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
           HP+      ++   +    L       E         ++V     +MG  +++  +  + 
Sbjct: 190 HPDALEHLVNVAGGDARSVLNALELAVETTPPDARGRIVV-----DMGVAEESIQRRAVL 244

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392
                      + A I+     + D  LYW    +HA  DP
Sbjct: 245 YDRDGDAHYDTISAFIKSLRGSDPDAALYWLAKMVHAGEDP 285


>gi|242038563|ref|XP_002466676.1| hypothetical protein SORBIDRAFT_01g012080 [Sorghum bicolor]
 gi|241920530|gb|EER93674.1| hypothetical protein SORBIDRAFT_01g012080 [Sorghum bicolor]
          Length = 722

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 27/280 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREF 155
             +  AR+++   +       +  V  +   +     R+   A    +  + ++P  R  
Sbjct: 255 GEVERARRVYERAADLLADDEDAEVLFVAFAEFEERCREVERARAMYKYALDRVPKGRAE 314

Query: 156 AVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +Y  +    +  GD            +      +  +P         ++         R
Sbjct: 315 ELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKDR 374

Query: 207 AITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD--- 257
                 +   N       R       L I  +L E  D  DM  +     E L+L     
Sbjct: 375 IREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAQDMERTREVYKECLRLIPHKK 434

Query: 258 -NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
                  + AA+  I Q   + A  IL     + P  +I   Y  +  E  +G   R   
Sbjct: 435 FTFAKMWLMAAQFEIRQKNLKAARQILGNAIGMAPKGKIFKKYIEI--ELYLGNFDRCRT 492

Query: 317 LE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L     E +  +  +    +++   +   D+A +   LA+
Sbjct: 493 LYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAI 532


>gi|269926238|ref|YP_003322861.1| transcriptional regulator, XRE family [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789898|gb|ACZ42039.1| transcriptional regulator, XRE family [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 816

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 77/237 (32%), Gaps = 18/237 (7%)

Query: 35  RLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMS 94
                SP   L++       W +   +        A L    + R+  K       G+++
Sbjct: 482 WATDKSPETALTLAANLWRFWQIRGYLLEGSRWLDAALRAADNARDEIKAEALHGLGVLA 541

Query: 95  IAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLLEV--QIALAERQYNIAHEKLEMMLQ-- 148
               +   A K +    Q  + T + E + +LL     +A    + + A +     L+  
Sbjct: 542 HGQGDYNSADKYYQQSLQIFESTQNKEGISHLLHALGTLAWMRGELDKAEDLFSRSLEIR 601

Query: 149 ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV------QQY 198
                P     A+ +  + +   G L++A+     +L +S          +      + Y
Sbjct: 602 KQLGDPRQIAVALNNYGYIALLKGKLDTAEAMCADSLVMSRTNRDSWCTALSLSNLGRIY 661

Query: 199 VLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +   E   AI  L +  +  +E    R+ AI L   +         I +      +L
Sbjct: 662 LEKGEIKPAIDSLLESIRLLEELGDKRDLAIALTNLACCYMAVDKSIEAKVHLSRAL 718


>gi|225156283|ref|ZP_03724761.1| hypothetical protein ObacDRAFT_8151 [Opitutaceae bacterium TAV2]
 gi|224803015|gb|EEG21260.1| hypothetical protein ObacDRAFT_8151 [Opitutaceae bacterium TAV2]
          Length = 741

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 109/312 (34%), Gaps = 18/312 (5%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G + +A   +  A  +  +             +L   ++  A + +  A E     +  
Sbjct: 172 RGQVYLARGKMDEA--LADFDQAVILSPKLAAAHLGRGRVLQARKDWQGALEAWSRAIAA 229

Query: 150 PATREFAVYS---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
              +  A         E  R GD  +A+     AL ++PD   +  A  + +      + 
Sbjct: 230 DPLQADAFRGRITALLELKRFGD--AARDI-DSALVLAPDDADLWLARGRIWRATGFPAN 286

Query: 207 AITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           A+  +N+  + +        A  LI ++L   + GD+  +      + +   +  MA + 
Sbjct: 287 ALGDINRAIELSVSAGSPPPAAALIEQALAKEETGDITGALDTLAAARQAAPDRNMAWLQ 346

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEI 320
            A+ L  Q +  +   +L     ++ HP+ A++        L        ++       I
Sbjct: 347 TARILGKQQRIAEIPPLLTP--FIDAHPQDADVIATRGSAELDLGQLEPAMRDFHAALAI 404

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379
           N +   +  ++S   L+     +A   A   ++ AP     +   A +E+    + +  +
Sbjct: 405 NPDLHWARYLLSFGWLKQHRTGEALVVAEDLIQRAPDLALGYQARASVEK-ERKDLNAAV 463

Query: 380 YWTQSALHAMPD 391
                A+   PD
Sbjct: 464 ADFGRAIERNPD 475


>gi|149920907|ref|ZP_01909369.1| hypothetical protein PPSIR1_38881 [Plesiocystis pacifica SIR-1]
 gi|149818306|gb|EDM77759.1| hypothetical protein PPSIR1_38881 [Plesiocystis pacifica SIR-1]
          Length = 435

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 82/256 (32%), Gaps = 15/256 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            + P A  +    + +     + L  L    +     + + A E  E+ + +        
Sbjct: 52  GDFPHALILARRAASEFPRKPDILTAL--GNVLDLHGELDEAREAFEVAVGLDPHGALQH 109

Query: 158 YSLYFESCRIGDLNSAQRYATKALDI---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
           Y+L     R+GD   A+    KAL +   SP       A+            A    ++ 
Sbjct: 110 YNLGAVLERLGDEGQAEDCYRKALRLDEGSPSMLESNAALGALLRRQGRLEEAEEVYDRY 169

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +           +L+   +  +D G ++ +      +L L      A    A +L    
Sbjct: 170 LQEDP----LDVEMLVEHGICLSDLGRLVEAIDRFDTALSLEAQHGGALYNKAITLYRLT 225

Query: 275 KKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL-----EEINKESVESL 328
           +   A  ++    +  P +P    ++   +     G L  ALRL     E +        
Sbjct: 226 RYGAARDVMGLAHRAEPNNPLTLAVFGSWVLNEPHGDLDSALRLIYRAIELVASLHDRGE 285

Query: 329 VIVSKIALEMGSIDQA 344
           +  +  +L    + +A
Sbjct: 286 LGGAYASLVAEEVFEA 301



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 11/129 (8%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L    C IGD   A   A +A    P  P +  A+     L  E   A         
Sbjct: 45  IRGL----CDIGDFPHALILARRAASEFPRKPDILTALGNVLDLHGELDEAREAFEVAV- 99

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL---CDNSIMASICAAKSLISQ 273
                + + A+            GD   +     ++L+L     + + ++      L  Q
Sbjct: 100 ---GLDPHGALQHYNLGAVLERLGDEGQAEDCYRKALRLDEGSPSMLESNAALGALLRRQ 156

Query: 274 NKKRKAEVI 282
            +  +AE +
Sbjct: 157 GRLEEAEEV 165


>gi|146276022|ref|YP_001166182.1| SARP family transcriptional regulator [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322713|gb|ABP64656.1| transcriptional regulator, SARP family [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 584

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 79/252 (31%), Gaps = 26/252 (10%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           V LL  +    E+   +A +     L     R    Y L  +     D+ +A +   +A 
Sbjct: 304 VNLLSARFDRCEQHRVMARKPDPANLADAVWRI--RYHL--QKFTREDMATAAQLLDQAF 359

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL-IARSLENADKG 240
           ++ P    +             W   +  +  +K +        A+    A +      G
Sbjct: 360 ELDPHHAELAM----LRANHVIWDHWLRRVPVEKCDGLVPLARAAVRADPADARGPLFMG 415

Query: 241 DMIASYHDAIESLK-------LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292
            +     +   +++       L      A      +     K  ++   LE+   ++P  
Sbjct: 416 VLETWRRNTEHAIRYLERSCELNPCFPAAFSHLGAAYYLNGKPERSIEPLERSLYLSPMD 475

Query: 293 P-------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
           P       E+      L       ++ R ++L   +   V + ++ +   + +G +++A 
Sbjct: 476 PFRFFILGELGTARLLLGEHAEALRIAREVQLT--HPNYVLAHILETNALVGLGEMERAR 533

Query: 346 AKAMLAMKIAPR 357
           A     +   P 
Sbjct: 534 AAWSRLLADRPD 545


>gi|332716490|ref|YP_004443956.1| hypothetical protein AGROH133_12124 [Agrobacterium sp. H13-3]
 gi|325063175|gb|ADY66865.1| hypothetical protein AGROH133_12124 [Agrobacterium sp. H13-3]
          Length = 181

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 55/152 (36%), Gaps = 6/152 (3%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A++ +P      +++       +   +A +  NQ      +       LL+  + E AD 
Sbjct: 15  AMEAAPSPAKTVDSLFASLKKERNAVKARSIANQIASEWNDSGSATINLLMQWAGEAADD 74

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIAN 297
               A+Y    +++ L  + + A    A    +    RKA   +    +  P   P +A+
Sbjct: 75  KRNAAAYDFLDQAILLDPDYVQAPYRRAMVHFADGDTRKAMADINLTLEKEPRYFPALAS 134

Query: 298 IY----THLLSENTVGKLKRALRLEEINKESV 325
           +          +  +   +R L L   +K++ 
Sbjct: 135 LANILEASGRDDLALKAWERYLALYPADKDAR 166


>gi|307352495|ref|YP_003893546.1| tetratricopeptide repeat-containing protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307155728|gb|ADN35108.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 308

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 13/176 (7%)

Query: 125 LEVQ-----IALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQR 175
           L  Q     I     + + A E    +L    + P   + A+ ++     R+     A  
Sbjct: 51  LAAQNRKGNILSILGRNDEALEVFRDVLRIVPENPILYDAALNNMANVLRRLERFEEALE 110

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              KAL+  PD                    A+    +     +  N    +      + 
Sbjct: 111 LYDKALEAEPDNVMALNNRGNVLSDMGRDEEALLMYERAL-EIEPGNSPVLVNKAYSLIG 169

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                + + +   A+   +L   +IMA    A  L    + ++A  I  +   +NP
Sbjct: 170 LRRNDEALIALDGAL---RLNPGNIMAMNNKANLLSELGRTKEAIKIYNQALDLNP 222


>gi|297538804|ref|YP_003674573.1| hypothetical protein M301_1616 [Methylotenera sp. 301]
 gi|297258151|gb|ADI29996.1| tetratricopeptide repeat protein [Methylotenera sp. 301]
          Length = 393

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 12/156 (7%)

Query: 134 RQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A      +L      P  +      L  +  + G L+ A+       D     P 
Sbjct: 84  GEVDRAIHLHLSLLDKKDLEPQQKLAVTAELAQDYLKAGLLDRAEELFESLDDDRYRQP- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY-- 246
              A+++ YV  +EW RAI      ++ +   +    A      ++++    D+  +   
Sbjct: 143 ALRALLEIYVREREWERAIKAATELERLSGVPFRVEVAHYYCEMAVKSKLANDLHTARFE 202

Query: 247 -HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
              A+ + K C   + A++         +  ++A  
Sbjct: 203 LEQALNANKNC---VRANVLLGDMEAEADAHKEAIS 235


>gi|167034056|ref|YP_001669287.1| TPR repeat-containing protein [Pseudomonas putida GB-1]
 gi|166860544|gb|ABY98951.1| TPR repeat-containing protein [Pseudomonas putida GB-1]
          Length = 771

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 61/224 (27%), Gaps = 17/224 (7%)

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA---VYS----LYFESCR 166
               +E +  L +V  A        +       L     R      +      L     R
Sbjct: 540 LAVRDEAVRALADVPAAQLP---EASRAAFTTSLADYEQRLRGNADLPGGRLNLAVLMQR 596

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G    A     +AL + P        +V     ++    A T L +     K    +R 
Sbjct: 597 QGHDAQAMEQYRQALHMDPYFTPARVNLVTLASSSQRLDDAETLLREGVALDKMPATDRG 656

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L    +L   ++     +     ++      +          L   N++ +A   L   
Sbjct: 657 NLAYMLALLLVERSKPQEAVDWMEQAAVALPGNSRIRYNQGLLLSRMNRRDEALQALRSG 716

Query: 287 WKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESV 325
             +   PE A++     Y H L+           R+ E   +  
Sbjct: 717 --LQQAPEDADLLYTLIYLHALAGEREQAYPYVRRMREAAPDDP 758


>gi|186472660|ref|YP_001860002.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184194992|gb|ACC72956.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum
           STM815]
          Length = 559

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 71/245 (28%), Gaps = 10/245 (4%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R+   Y S      + +L +L     A +          LE    + AT   ++  L  +
Sbjct: 14  RRSTPYFSAMLPTFDPFLAFLRYAAAAQSGGDARARALWLEAASCLHATDNASIDGLMLD 73

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKKNAKEW 221
                    A         + P +       +     + +++   A+    +       +
Sbjct: 74  LLEQQQFEQAVSLVEAVAQLEPHSA-AANMRLGYAMQMASRD-RDALAPYRRALAIDPAF 131

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            + R  L IA +   AD          A+ +        +  + A ++         A  
Sbjct: 132 PQLRKNLAIALNRTGADPVQEREMLEAAVAAAPSDLALWLNLMPARRACFDLEGSLAAA- 190

Query: 282 ILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
             E+  +++P   IA+         S+     L  A +   +   +      +  + L  
Sbjct: 191 --ERAVELDPQSAIAHGNLAQALKESQRWDDALDHANKACALAPGNPSLRTALGVLHLLR 248

Query: 339 GSIDQ 343
           G   Q
Sbjct: 249 GEYAQ 253


>gi|117926995|ref|YP_867612.1| sulfotransferase [Magnetococcus sp. MC-1]
 gi|117610751|gb|ABK46206.1| sulfotransferase [Magnetococcus sp. MC-1]
          Length = 637

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 48/164 (29%), Gaps = 5/164 (3%)

Query: 96  AAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
               + LAR+  +         +   ++            L + + N A    +  L+  
Sbjct: 177 GLGQLELARQNGALAEQHFLKGRKFSNHPAAFDNSIGLARLEDGRVNEAIAAFKQGLEAE 236

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
               F   +L       GD  + Q    + +   P+ P+    + Q    +   S  I  
Sbjct: 237 PHAAFIQINLANALRASGDFAATQALFEEGVAHHPEHPFFLTGLAQMVRQSDPHSELIQR 296

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           + Q  ++     + R  +L               ++    ++ +
Sbjct: 297 MEQMVQHPDMVEQERIAMLYTLGRALDQSHAYDRAFTAYQQANR 340


>gi|311895787|dbj|BAJ28195.1| hypothetical protein KSE_23780 [Kitasatospora setae KM-6054]
          Length = 336

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 6/64 (9%)

Query: 130 ALAERQYNIAHEKLE------MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           A  E  +  A                      A+  L  ++  +G   +A + A + +D 
Sbjct: 110 AQDEGDHGFAQRYYAHAFRLAAEAGDAELSATALRGLAVQAIDLGYRAAAVQIAEECVDQ 169

Query: 184 SPDA 187
           +   
Sbjct: 170 AKRL 173


>gi|240016322|ref|ZP_04722862.1| hypothetical protein NgonFA_03994 [Neisseria gonorrhoeae FA6140]
          Length = 497

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 90  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 146

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 147 RLL---LEAGRFYAEDNQNKESAAAFEKV 172


>gi|224001874|ref|XP_002290609.1| Hypothetical protein THAPSDRAFT_262464 [Thalassiosira pseudonana
           CCMP1335]
 gi|220974031|gb|EED92361.1| Hypothetical protein THAPSDRAFT_262464 [Thalassiosira pseudonana
           CCMP1335]
          Length = 585

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 86/273 (31%), Gaps = 46/273 (16%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--ALDISPDAPWVT 191
            +   A E     L++  +       L   + R GDL  A+    +  A +  P+ P++ 
Sbjct: 60  GKLEEAQEYYMKALEMDPSDGRPYLGLSRIAERRGDLEYAKGMLRQGIARNNGPN-PFLL 118

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
           +A+      +   + A     Q  ++             A +     +         A E
Sbjct: 119 QALGTLEQRSGHLAHAEELYLQALRSRPSH---------AAAWVALAQLRTKELRQSA-E 168

Query: 252 SLKLCDNSIMASICAAKSLISQNKKR----KAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           + ++C               ++N+ R    K    +   W           Y   + ++ 
Sbjct: 169 AGRIC------------YQSAENELRRIGAKPNAFVYTAWAS-------MEYKKGIKDDA 209

Query: 308 VGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE---- 359
            G ++RA  L E+          + + +  +  E G+ D+A       +    R      
Sbjct: 210 QG-IRRARELYELALEADPRCSVAFLQLGVMESECGNFDRAKECFEKVLTFDQRNSRVLQ 268

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHA-MPD 391
            + ++         ++ ++L   + AL A   D
Sbjct: 269 AYAIMESRRPREDVDSRRVLDLFERALQANPRD 301


>gi|254523903|ref|ZP_05135958.1| ParB domain protein nuclease [Stenotrophomonas sp. SKA14]
 gi|219721494|gb|EED40019.1| ParB domain protein nuclease [Stenotrophomonas sp. SKA14]
          Length = 493

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 82/230 (35%), Gaps = 17/230 (7%)

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
            TR   + +   E+C   D   A++   +   +  +      A+       +E + AI  
Sbjct: 139 ETRLEKIDAELEEACDAEDEAKAEKLEQRRDQVVGELQDAENALQGYAPEVREVAGAIVT 198

Query: 211 LNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +++  +        R A     R+LE   +G        A E  +  D+   A+  + + 
Sbjct: 199 IDRNGEAVIHRGLLREAEAKALRTLEKLRRGFGSTEGEAANEEHEDADDPPKAASLSDQL 258

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-----------KLKRALRLE 318
               +  R A + +E     +PH  +A +   ++ +                LK   RLE
Sbjct: 259 AQRLSAHRTAALQIEVA--RHPHVALAALVHGMVQKVLQDSYHGHDLPLGVSLKVQDRLE 316

Query: 319 EINKESVESLVIVSKIAL---EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
            +  +  ES   V+   L      ++ +  A+   A+    + E+  LLA
Sbjct: 317 GMAPDWPESPAAVALRELQQVAGEALPEDSAELFAALLAKSQDELVRLLA 366


>gi|190572915|ref|YP_001970760.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190010837|emb|CAQ44446.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 564

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 92/277 (33%), Gaps = 23/277 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +      +++ +S+Q    +     LL  +IA   ++Y  A +    +       E  +
Sbjct: 291 GDKAALSNLYNELSRQAAKPDPAQ-RLLLGKIAEYLKRYPEAVQWYHSVPGGDELSEARL 349

Query: 158 YSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +   ++        L+      + A+              +    A + +  +  L + 
Sbjct: 350 RAANAQALAGRLPQALDEVHAIQSDAVVDDDVRRDAYLLEAELRQRADDSAGELDALARG 409

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQ 273
                + N     LL AR+L    + D+  +  D  + L     ++ A +          
Sbjct: 410 LAAYPDDNG----LLYARALTWERRDDIPRAEADLRKILVTDPENVPALNALGYTLADRT 465

Query: 274 NKKRKAEVILEKIWKVNPHPEIAN--------IYTHLLSENTVGKLKRALRLEEINKESV 325
            + ++A  ++++       P+ A         +Y     E  + +L+RA  L +      
Sbjct: 466 GRLQEALELIDRARVAE--PDNAAIVDSYGWVLYRLGRKEEALVQLRRAWTLAK----DP 519

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           E    V ++   +G  D+A      A K+ P     L
Sbjct: 520 EIAAHVGEVLWVLGKHDEARHFFDEAAKLDPENRALL 556


>gi|170940154|emb|CAP65381.1| unnamed protein product [Podospora anserina S mat+]
          Length = 512

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 87/273 (31%), Gaps = 47/273 (17%)

Query: 127 VQIALAERQYNIAHEKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            +   A  Q   A E LE         + Q   +R  + ++L       G +  A     
Sbjct: 163 ARAYQANGQVQEAVELLEQVVAIQAKTLTQEHPSRLASQHTLAIAYQANGQVQEAIELLE 222

Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ---------KKKNAKEW 221
           + + I         PD       + + Y    +   A+  L Q          +++    
Sbjct: 223 QVVAIEAKTLTQEHPDRLASQHELARAYQANGQVQEAVELLEQVVAIKAKTLTQEHPDRL 282

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLC---DNSIMASICAAKSLISQNKKRK 278
                +    ++     +   +     AI++  L     + + +    A++  +  + ++
Sbjct: 283 ASQHELARAYQANGQVQEAVELLEQVVAIQAKTLTQEHPDRLASQHELARAYQANGQVQE 342

Query: 279 AEVILEKIWKVNP------HPE-------IANIY-THLLSENTVGKLK-----RALRLEE 319
           A  +LE++  +        HP        +A  Y  +   +  V  L+     +A  L +
Sbjct: 343 AVELLEQVVAIQAKTLTQEHPSRLASQHTLAIAYQANGQVQEAVELLEQVVAIKAKTLTQ 402

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            + + + S   +++     G + +A       +
Sbjct: 403 EHPDRLASQHELARAYQANGQVQEAVELLEQVV 435


>gi|156051856|ref|XP_001591889.1| hypothetical protein SS1G_07335 [Sclerotinia sclerotiorum 1980]
 gi|154705113|gb|EDO04852.1| hypothetical protein SS1G_07335 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 695

 Score = 38.4 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 29/199 (14%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEW 221
              G    A   + +A  + P+   V   + + Y+       A+    + +         
Sbjct: 243 MAAGQYYQALEDSKRADQLDPNNHKVLLRLARIYISMGLPQEAMDTFGRIQPPPSAKDMA 302

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
                +  +A + E    G    + H   ++ KL    +              + RK   
Sbjct: 303 PAKAMLQHLASAAEALKNGTGSMAIHSIEQAEKLLGTGVP-------------RPRK--- 346

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGS 340
                W++         Y  + + N +G  +  A+ L   N +  E+LV+  +     G 
Sbjct: 347 -----WQLM----RGEAYLKMGNVNALGDAQNVAMSLLRGNSQDPEALVLRGRALYSQGE 397

Query: 341 IDQAHAKAMLAMKIAPRKE 359
            D+A      A+   P   
Sbjct: 398 NDKAIQHFRQALTCDPDYR 416


>gi|239906484|ref|YP_002953225.1| hypothetical protein DMR_18480 [Desulfovibrio magneticus RS-1]
 gi|239796350|dbj|BAH75339.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 3145

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 90/296 (30%), Gaps = 40/296 (13%)

Query: 98   HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                LA+        +           +  +  +            E   +         
Sbjct: 2081 GEGELAQDALERAQAKLDEAKR-----INAKAKILAGLEEKIKRAREATSKAEK------ 2129

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
              L  ++ +    GD   A+R A++AL ++P          +     + ++  +  L   
Sbjct: 2130 --LLAQAAKQWAEGDAEGAERAASEALALAPKLD-------RAKSDKQRYTEGLAKLKAS 2180

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             ++AK+      I     ++ N    +   +Y   ++  K            AK L    
Sbjct: 2181 LEHAKDLQSKNEIAPALTAVANGKGVNP--AYKPLLDLEKQLLEQQKKQQELAKLLEKSQ 2238

Query: 275  KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            K+ +   + E         E A +      +    + K A  L    +++V   V   + 
Sbjct: 2239 KQWEDGEVDEACLTAQ---EAAKL------DVPGSEAKSAASLYCQGRDAVAQAVKHGES 2289

Query: 335  ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK---ILYWTQSALH 387
             L    +D+A  +     KI  + +    LA++E+  +   ++   +      A  
Sbjct: 2290 ELTASQLDKAQVQLEAGRKINAKAKS---LAELEEKINKTKERQKQVEQLLARAAK 2342


>gi|258510894|ref|YP_003184328.1| zinc finger SWIM domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477620|gb|ACV57939.1| zinc finger SWIM domain protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 603

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 311 LKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369
           L  A  +  +      E+ + +++ A++      A +         P  +++ +LA +  
Sbjct: 368 LAAADEIARMRPVLDREADMRLAQAAMDAEDWGIAESSLKRIAGTRPSADVWAMLADVMD 427

Query: 370 ANSHNTDK 377
               +   
Sbjct: 428 CQGKSDGA 435


>gi|209550722|ref|YP_002282639.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536478|gb|ACI56413.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 598

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 65/200 (32%), Gaps = 12/200 (6%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQ-------YVLAKEWSRAITFLNQKKKNAKEWNRN 224
           +A+  A  AL + PD      A++            + +   ++       + A +    
Sbjct: 365 AARSLAADALAVDPDYA-AARALISFTHVLDYVNAWSDDPEGSLRTGLDLAQQAVDMAEE 423

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +     A  +      ++  +  + +  L L  NS       A   I       A   L+
Sbjct: 424 QPNSHFALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALATLD 483

Query: 285 KIWKVNP-HPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
              +++P HPE+   +              +    +  + N +S  +  +++     +G 
Sbjct: 484 ASMRLDPHHPELLFQFLADARFSLGEYQQAIAAIEQRLQQNAQSETAYALLASCYGHLGR 543

Query: 341 IDQAHAKAMLAMKIAPRKEI 360
            + A      A++I P   I
Sbjct: 544 AEDARQAWEKALQINPDFSI 563



 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 30/159 (18%)

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            +  A + +    +L         ++    A+   A ++L +  +       AA++LIS 
Sbjct: 335 AQGRAVDVSAYELLLRGREQASAHNRTGNRAARSLAADALAVDPD-----YAAARALISF 389

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE----SLV 329
                   +L+              Y +  S++  G L+  L L +   +  E    S  
Sbjct: 390 ------THVLD--------------YVNAWSDDPEGSLRTGLDLAQQAVDMAEEQPNSHF 429

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
            +    +    +D+A A+ +  + ++P   E+  L+A I
Sbjct: 430 ALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHI 468


>gi|147676599|ref|YP_001210814.1| hypothetical protein PTH_0264 [Pelotomaculum thermopropionicum SI]
 gi|146272696|dbj|BAF58445.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
          Length = 927

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 5/113 (4%)

Query: 178 TKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            K L   P  P   +A  +    Y +   W+ A+  L +         R  A   +   L
Sbjct: 465 EKFLAEFPGHPGADDAAYRLARCYEIEGRWTDALNTLRKALSLPDGDIRYHAAGRLVYVL 524

Query: 235 ENADKGDMIASYHDAIE-SLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEK 285
           +     D +     A E S KL  +         A   + ++  R+   +LE+
Sbjct: 525 DVRMTYDQLKELSQAREQSKKLDPSLKPLVDYSLAVKELRRDNYRQTAGMLEE 577


>gi|187924974|ref|YP_001896616.1| tetratricopeptide repeat protein [Burkholderia phytofirmans PsJN]
 gi|187716168|gb|ACD17392.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phytofirmans
           PsJN]
          Length = 391

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 12/177 (6%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+     +L+    A  
Sbjct: 84  GETDRAIRVHQNLLSRADLPVSERDHALYELGQDFLKAGLLDRAEETFR-SLETGDYALG 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W ++I      +    E  ++  A      + E   +     +   
Sbjct: 143 AQRALLTIYEIEKDWVKSIDTARHLETMGAESLDKEIAQFHCELAQEALQQKKPDEARRQ 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
              +LK    ++ A+I       +   +  A     ++ + NP       Y  L++E
Sbjct: 203 LGFALKANPTNVRATILFGDVDAAGGAQEAAIAQWRRVEEQNP------AYLPLVAE 253


>gi|227818845|ref|YP_002822816.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|36959103|gb|AAQ87528.1| Putative adenylate cyclase 3 [Sinorhizobium fredii NGR234]
 gi|227337844|gb|ACP22063.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 769

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A   L++    A E     A  + A+ L  A +G    ++     ++KL  N     +
Sbjct: 438 EAASRNLDRNLAKAMEKPTPLAYAISAQLL--AQQGRYDEAFAAIDRAMKLAPNDPDNHV 495

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHP 293
             A+ L +     +AE  +    +++PHP
Sbjct: 496 SMARVLNATGHAAEAEQQVRLAMRIDPHP 524


>gi|323136407|ref|ZP_08071489.1| phosphate transporter [Methylocystis sp. ATCC 49242]
 gi|322398481|gb|EFY01001.1| phosphate transporter [Methylocystis sp. ATCC 49242]
          Length = 332

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 43/155 (27%), Gaps = 19/155 (12%)

Query: 12  SLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAM 71
            LV      +       +I W   L   S  V+   L F L   ++L     F    PA 
Sbjct: 113 GLVGAGVAKI----GTGAIVWSGLLKTGSAIVLSPALGFVLALMLVLAVSWIFVRRSPAA 168

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH-------NEYLVYL 124
           +  +          + +   L S+       A+K    ++     H       +     +
Sbjct: 169 VDRLFRT------LQFVSASLYSLGHG-GNDAQKTMGIIAVLLYSHGVYGGEFHVPFWVV 221

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
           L  Q A+           +  M     TR   +  
Sbjct: 222 LTCQAAMGLGTLFGGWRIVHTM-GSKITRLTPMQG 255


>gi|218247925|ref|YP_002373296.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|257060752|ref|YP_003138640.1| hypotheticalprotein [Cyanothece sp. PCC 8802]
 gi|218168403|gb|ACK67140.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|256590918|gb|ACV01805.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 297

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 51/174 (29%), Gaps = 10/174 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           LY +   +     A +   KAL ++P    +   +   Y    ++  A T L    K   
Sbjct: 96  LYIQQKELDKGVEALQ---KALSLAPSEAGIKFTLGNAYFQQGKYQEAATELQDGLKIKP 152

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +        L            M  +     +++ L  N   A          Q     A
Sbjct: 153 DTP----AALFDLGNSYLKLNKMSDAIASYQKAIALEKNFWPAINNIGLIKYEQGDINGA 208

Query: 280 EVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
               +   +++P    P++A      +   T   LK      +++    E   +
Sbjct: 209 VKDWQTALEIDPEQAEPQLAVAVGLYIQGKTEQGLKLGEAALKLDSRYAELKFL 262


>gi|91094535|ref|XP_972454.1| PREDICTED: similar to AGAP001879-PA [Tribolium castaneum]
 gi|270000758|gb|EEZ97205.1| hypothetical protein TcasGA2_TC004395 [Tribolium castaneum]
          Length = 671

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 82/251 (32%), Gaps = 28/251 (11%)

Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLY-FESCRIGDLNSAQ---------R 175
            +    +++++ A    +  +  +P  +   +Y  Y     + GD +  +         +
Sbjct: 255 ARFEENQKEHDRARVIYKYALDHLPKEQAKELYKAYTIHEKKYGDRSGIEDVIVSKRKFQ 314

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-----AKEWNRNRAILLI 230
           Y  + L+ +P         ++      +   +     +   N      K++ R    L I
Sbjct: 315 YEQEILE-NPTNYDAWFDYLRLVEGEGDLETSRETYERAIANVPPTKNKQYWRRYIYLWI 373

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L L            +  A+  I +     A  IL  
Sbjct: 374 NYALFEEIEAVDYERTRQVYKACLDLIPHKLFTFSKIWLLFAQFEIRRKNLIGARKILGT 433

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSI 341
                P  ++   Y  +  E  + +  R   L     E   E+  + +  +++   +G  
Sbjct: 434 AIGKCPRDKLFRGYIDI--EIQLREFDRCRILYGKYLEFGPENCVTWMKFAELETLLGDF 491

Query: 342 DQAHAKAMLAM 352
           ++A A   LA+
Sbjct: 492 ERARAIYELAI 502


>gi|317032552|ref|XP_001395082.2| DnaJ and TPR domain protein [Aspergillus niger CBS 513.88]
          Length = 521

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  LA      A    +  +    T    +        S   G  + A 
Sbjct: 29  DTPLSSLIASAKSHLAGGSPREALVYFDAAVSRDPTNYLTLFQRGATQLSL--GKSSLAL 86

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNR 225
               + L + PD         +    + +W+ A+  L++  K++  E+   R
Sbjct: 87  EDFDRVLQLKPDFESALLQRARLKASSADWAGALGDLDKAGKRSTPEYQELR 138


>gi|269796979|ref|YP_003316434.1| tetratricopeptide repeat protein [Sanguibacter keddieii DSM 10542]
 gi|269099164|gb|ACZ23600.1| tetratricopeptide repeat protein [Sanguibacter keddieii DSM 10542]
          Length = 1126

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 70/256 (27%), Gaps = 64/256 (25%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           P A +  +    +    ++ L+  L      A  + + A    +       T    + +L
Sbjct: 782 PSAAEDDALARLRRYRPDDPLLSGLAGHRLYAAGRRDEAVSAWQASADADGTDPVVLRNL 841

Query: 161 YFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              +      GDL +A+ Y  +A  ++P                     A       +  
Sbjct: 842 GLAAYNVLDDGDL-AARCY-DQARALAP-------------------DDARLLYEADQLA 880

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                  R +    R+   + + D++A+  D              ++  A  L   ++  
Sbjct: 881 G-----RRGVGPAERAAALSARADLVAARDDL-------------TVQLAVLLTDLDRAD 922

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           +A  +L               +                 L   +         ++  AL+
Sbjct: 923 EALALLT-----------GRSFQPWEGGEGS-------VLAAWDSAHG----SLALAALD 960

Query: 338 MGSIDQAHAKAMLAMK 353
            G  D A      A++
Sbjct: 961 AGHPDDAVRHVQAALE 976


>gi|172062171|ref|YP_001809822.1| serine/threonine protein kinase [Burkholderia ambifaria MC40-6]
 gi|171994688|gb|ACB65606.1| serine/threonine protein kinase [Burkholderia ambifaria MC40-6]
          Length = 1349

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 42/160 (26%), Gaps = 6/160 (3%)

Query: 103  ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAVYS 159
            AR+     +         +  L   +        + A      +L++      R    Y+
Sbjct: 1166 AREAVYCATCLDHLPTLGVTMLYLARTYQLAGDRDAARSLSAALLRLSEAHRLRAVGHYA 1225

Query: 160  LYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216
                +    D      +  A +         +    + +      ++  A+  + Q    
Sbjct: 1226 AIIHAWTQEDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAWCGDYDAALAQIRQCLAW 1285

Query: 217  NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                  R     L+ +  E   + D       A+++ +  
Sbjct: 1286 CESTGERYYEAQLLLKECEYLRRADPRCGGVAALDACRRA 1325


>gi|148655298|ref|YP_001275503.1| hypothetical protein RoseRS_1146 [Roseiflexus sp. RS-1]
 gi|148567408|gb|ABQ89553.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 1091

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 30/232 (12%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E+ R+ + + A + A +AL   P       A         ++ +A+   +      +  
Sbjct: 16  REAARLMNWDEALKQAVRALQEFPQDLDARSAAAVALFNTAKYVQALQMFD----ELRRA 71

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           + +    L   +  +   GD  A+                A +  A   IS+    +A  
Sbjct: 72  DASNPFYLEYLARTHERLGDPKAA--------------TTAYVQLADLQISRKLAARAID 117

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L +  ++ P            +++   +L + L  +    E+    + +++ A   G +
Sbjct: 118 ALREALRLQP-----------DADDQRARLAQLLADQGARAEAAAQYLDLARRAQAHGRL 166

Query: 342 DQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMPDP 392
           +QA   A  A++  P       L+A +  A +      +  T +A  A+P P
Sbjct: 167 EQAVDLAETALRYEPDNREAKELIAALHDALATTLQSAIEATPAATEAIPLP 218


>gi|328697970|ref|XP_001947340.2| PREDICTED: transmembrane and TPR repeat-containing protein
           CG4050-like [Acyrthosiphon pisum]
          Length = 890

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 88/238 (36%), Gaps = 27/238 (11%)

Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A E  E  L      P       Y+L       G  + A  Y  KAL+  PD   
Sbjct: 604 NRTKEAQEVYERALFYDTDNPDI----YYNLGVVLLEQGKHSQALAYLDKALEFDPDHEQ 659

Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  ++Q+   A     A   L +   N ++  R    +     +   D+GD+ A+ 
Sbjct: 660 ALLNSAILLQELGQANLRKLAEKRLLRLLSNGQKNER----VFFNLGMLAMDEGDVPAAE 715

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299
           H   +++ + ++   A    A  L   ++  +A   L +   V  HP+       + +IY
Sbjct: 716 HWFRQAILIKEDFRAALFNLALLLADDHRPLQAAPFLNQ--LVRFHPDHVKALILLGDIY 773

Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             ++   +         R+ +++ ++ + +  +  + +E G +  A      A  +AP
Sbjct: 774 INNIKDLDAAENC--YQRILQLDPDNTQGMHNLCVVYVERGLLKDAEICLQKAHLMAP 829


>gi|302343719|ref|YP_003808248.1| hypothetical protein Deba_2292 [Desulfarculus baarsii DSM 2075]
 gi|301640332|gb|ADK85654.1| TPR repeat-containing protein [Desulfarculus baarsii DSM 2075]
          Length = 404

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 6/142 (4%)

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT- 300
           M  +      +L+L      A+   A     Q K   A  ++ K ++++  P+   +Y+ 
Sbjct: 85  MAEAQSHFQRALELYPCFAPAAQNLALVYFEQKKPLAAAEMMLKAYELSTKPDDELLYSA 144

Query: 301 ---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356
              ++        L    RL   +K     L  + +  + +   D A +     M   P 
Sbjct: 145 AAFYVAGGQPAKGLPYLERLCAKDKPKAHWLTALVQCLMSLKRHDAAASVLRRLMNQEPG 204

Query: 357 RKEIFLLLAQIEQANSHNTDKI 378
           R +++ LLA IE A   +    
Sbjct: 205 RVDLWRLLAAIE-AERKDYKAA 225


>gi|194746936|ref|XP_001955910.1| GF24855 [Drosophila ananassae]
 gi|190623192|gb|EDV38716.1| GF24855 [Drosophila ananassae]
          Length = 1754

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 40/242 (16%)

Query: 122  VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            V+L        E ++  A E+       P         +Y  +   GD  +A   A    
Sbjct: 1142 VHLKIAMSLEDEGKFEAAEEEFLK-AHKPREAIL----MYQHA---GDWQAALNVAEL-- 1191

Query: 182  DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
                        V+     A     A+          + +    A+LL A+  +   +  
Sbjct: 1192 ----HLSEAVGEVLIGQASA-----ALET--------RNYKDYEALLLRAQRPDLIVEHY 1234

Query: 242  MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
               S ++  ++L++ +    A++   + L +Q ++ +A     +         I+  Y  
Sbjct: 1235 KQESLYE--DALRIAEEHYPAALNDLRRLQAQLQRGQA-----QAQANEDAASISRSYLQ 1287

Query: 302  LLSENTVGK--LKRALRLEEINKESVESLVIVSKIALEMGS----IDQAHAKAMLAMKIA 355
              +E    +   K A  L +I+  + E  V + +  L          +      LA  + 
Sbjct: 1288 KAAEFAKKEQFRKAAECLMQIDSSNAEDAVTLERALLRAAEICNQFLEGQDAQELAQALG 1347

Query: 356  PR 357
            PR
Sbjct: 1348 PR 1349


>gi|59800989|ref|YP_207701.1| hypothetical protein NGO0555 [Neisseria gonorrhoeae FA 1090]
 gi|59717884|gb|AAW89289.1| hypothetical protein NGO0555 [Neisseria gonorrhoeae FA 1090]
          Length = 497

 Score = 38.4 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 90  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 146

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 147 RLL---LEAGRFYAEDNQNKESAAAFEKV 172


>gi|302851773|ref|XP_002957409.1| hypothetical protein VOLCADRAFT_107666 [Volvox carteri f.
           nagariensis]
 gi|300257213|gb|EFJ41464.1| hypothetical protein VOLCADRAFT_107666 [Volvox carteri f.
           nagariensis]
          Length = 737

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 22/191 (11%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF-AV 157
           +   A+                 ++L              A  + + +L   A R   AV
Sbjct: 418 DPQAAKPALERAVMGFCKRRPE-IHLFAAHFDERHGDVEGARARYKQLLNSVAPRLLEAV 476

Query: 158 YSLYFESCRIGDLNSAQRY---------ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
            +      R G+L +A  Y         A ++  I P                 + + A 
Sbjct: 477 TAAANFERRQGNLEAACHYLSELMNEEKAKESSRIYPFL--AIHYAHFLRRNTGDLAAAR 534

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASI 264
             L+   +            L   ++   +      +   A++    C  S      A+ 
Sbjct: 535 KVLDDALQQCPGVRS-----LWEAAIHFEELVGGAEAVSRALDLYNRCTGSPPEGAVAAT 589

Query: 265 CAAKSLISQNK 275
            A + L  +++
Sbjct: 590 AAGRCLPERDR 600


>gi|300705248|ref|YP_003746851.1| hypothetical protein RCFBP_21090 [Ralstonia solanacearum CFBP2957]
 gi|299072912|emb|CBJ44268.1| conserved exported protein of unknown function (TPR-like)
           [Ralstonia solanacearum CFBP2957]
          Length = 642

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 64/173 (36%), Gaps = 13/173 (7%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L Q  ++ +   R   I  + R+           +   A   ++L   S+ A       +
Sbjct: 116 LAQDTRDPRFAQRATEIAFLTRA--------PSQALTAARLWVELAPTSMPARQVQQLLM 167

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325
           ++  +  + E +L+         + A+    L      S + VG +     L   + +  
Sbjct: 168 VATGQWSEVEPMLQAQLNKVSPGQRADAILQLQQQMSKSNDPVGAVSALQHLTVHDAQRP 227

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
           E+ + +++  +       A ++   A+++ P  E   +LA   +A+S+    I
Sbjct: 228 ETHLALARAKVVAKDNTGALSELDTALRLRPGYEDAAILAAELRADSNPDAAI 280


>gi|298368678|ref|ZP_06979996.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282681|gb|EFI24168.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 610

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 96/284 (33%), Gaps = 28/284 (9%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRYATKAL 181
           LL  ++AL +     A      M+ +  T+    A  +L   +  +     A+    K  
Sbjct: 60  LLGGEMALQKGDAGTALATY--MVTLERTKDPVVAERAL-EMAVSLNAFEPAEMIYQKWR 116

Query: 182 DISP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            I P          WV   ++ +        +++  L++    A+E +  +  LL++++ 
Sbjct: 117 QIEPVPGEAQKRMGWVRNLMMGRA------DKSLKGLDEILSRAEEEHAKQIFLLLSQAA 170

Query: 235 ENADKGDMIASYHDAIESLKLC---DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                     +   A +  K      +   ASI  A         R A   L+ + K++ 
Sbjct: 171 VQ----QPDLAAKGASQVHKAAQKYPDMPEASIADAIYSAQSGSDRHAVSALQNLAKLDS 226

Query: 292 H--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
              P  A     L+++     L R  R  +  K S     +     +     D+A+ +  
Sbjct: 227 EILPPTALT-LRLVAQRNPEILSRFFRDTDSKKLSSVWQELEIATLIANKQQDKAYKRLH 285

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
             +   P  ++++  A +  +   +   +  + + A     D  
Sbjct: 286 ELLADNPNADLYIQAAYLAGSRREDISVVNGYLEKAYRTGTDEQ 329


>gi|332828525|gb|EGK01225.1| hypothetical protein HMPREF9455_02417 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 935

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 11/110 (10%)

Query: 148 QIPATREFAVYSLYF--ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           +   TR+  +Y+L        + DL+ A   A  A+D S  A     A++++ +   +  
Sbjct: 207 KDDDTRKATLYALSRCGSKASLKDLSLAAEKAGYAVDKS-GATEAYIALLKRLLDKGDAK 265

Query: 206 R----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                A   + + +K  +   R  A+ ++  +    + GD +     A++
Sbjct: 266 DVAKLANDLMKKAEKAGQGHTRESALQILMSA----NPGDALKLLQAALK 311


>gi|330811758|ref|YP_004356220.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379866|gb|AEA71216.1| Conserved hypothetical protein; putative lipoprotein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 239

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 2/112 (1%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
              +S         L  L   Q   A    N A   LE   ++       +Y L      
Sbjct: 124 AGGLSADEQLDGPVLALLTTAQQQQAGGDLNGASSSLERAQRVAPREPQVLYRLAQVRMA 183

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKK 216
            GD   A++ A + L  S   P +  ++ +       K+   A   L ++K 
Sbjct: 184 QGDAPQAEQLARRGLTFSSGRPALQASLWELIAQAREKQGDSAGAALARQKA 235


>gi|240080440|ref|ZP_04724983.1| hypothetical protein NgonF_03887 [Neisseria gonorrhoeae FA19]
 gi|268596582|ref|ZP_06130749.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268550370|gb|EEZ45389.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
          Length = 496

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 89  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 145

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 146 RLL---LEAGRFYAEDNQNKESAAAFEKV 171


>gi|196228972|ref|ZP_03127838.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196227253|gb|EDY21757.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 555

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 43/135 (31%), Gaps = 7/135 (5%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L    +L +   G +  +     + + +  N   A       ++   +  +A  ++ +  
Sbjct: 8   LAFQLALGHRQAGRLPDAEALLRQIVAVQPNHTSAWHQLGLVVLQLGRPAEAVDLIRQAV 67

Query: 288 KVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            + P     H ++   Y   +  +    +        ++  +  +   +    L  G  +
Sbjct: 68  ALQPGNAALHSDLGVAYR--MRGDLEEAITSFRNALRLHPGAGHTHRNLGDALLAAGQSE 125

Query: 343 QAHAKAMLAMKIAPR 357
           +A A    A+   P 
Sbjct: 126 EAIASYRSAIAAQPT 140


>gi|169598278|ref|XP_001792562.1| hypothetical protein SNOG_01940 [Phaeosphaeria nodorum SN15]
 gi|111069032|gb|EAT90152.1| hypothetical protein SNOG_01940 [Phaeosphaeria nodorum SN15]
          Length = 517

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 19/157 (12%)

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIE---QANSHNTDKILYWTQS 384
            +++    +    +A + AMLA+        FL+  +A  E    A   ++ +   W   
Sbjct: 202 ALAETRRALQDPSRARSTAMLAIPYVDTDHTFLMQVMALFEILFGAEEASSKQAQNWLSH 261

Query: 385 -----ALHAMPDP-LWISDDGY---LSSVWLPLSPISKT-----LCYFEWKIPTKSPEYI 430
                AL     P  +  D  +   +++ W PL    +T     L    WK         
Sbjct: 262 AQGEIALIVARGPEAFTEDAAHAIFVNARWRPLIASCRTRTKSILNEKRWKTIPWRGRIK 321

Query: 431 SSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467
           + ++    +    P                P  +   
Sbjct: 322 TPQDSLLDIMAGVPEILANIDRWGALSAGTPQDEATD 358


>gi|108763040|ref|YP_630512.1| hypothetical protein MXAN_2291 [Myxococcus xanthus DK 1622]
 gi|108466920|gb|ABF92105.1| hypothetical protein MXAN_2291 [Myxococcus xanthus DK 1622]
          Length = 507

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 5/119 (4%)

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANI 298
             +      +LK       A       L ++ K  +AEV L +       P+    +A +
Sbjct: 141 AEARPPIAAALKQVPGFAPALWAQGVLLQAEGKPAEAEVRLREALAQLDAPQIRTSLAML 200

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
              +       + +    +E    E  E+L  ++++A     +  A       + + PR
Sbjct: 201 LAGIPEREADARAELTRTVEAW-PEQPEALRKLAQLARAANDVRAAATAGEKLVALKPR 258



 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 73/229 (31%), Gaps = 48/229 (20%)

Query: 180 ALDISPD---APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           AL   P    A W    ++Q      + + A   L +      +  + R  L +  +   
Sbjct: 150 ALKQVPGFAPALWAQGVLLQ---AEGKPAEAEVRLREALAQ-LDAPQIRTSLAMLLAGIP 205

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291
             + D  A     +E+         A    A+   + N  R A    EK+  + P     
Sbjct: 206 EREADARAELTRTVEAWPEQPE---ALRKLAQLARAANDVRAAATAGEKLVALKPRDKDA 262

Query: 292 HPEIANIYTHL-LSENTVGKLKRAL-------------------------------RLEE 319
           H   A+++      E   G L+R                                 RL  
Sbjct: 263 HRLQADLWLAASEKEKAAGSLERYAELGGMEPAALGLLVRLYRELGRADVEDKALVRLVA 322

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367
              E  E L+ ++++A   G    A    + A + AP R +I +L A++
Sbjct: 323 AAPEDPEPLLRLAELAEARGDSKAAETHLVKASERAPARADIHVLRARL 371


>gi|104781797|ref|YP_608295.1| transcriptional regulator [Pseudomonas entomophila L48]
 gi|95110784|emb|CAK15497.1| putative transcriptional regulator [Pseudomonas entomophila L48]
          Length = 513

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 3/132 (2%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAK 219
           +  +   GDL+       +A  ++P+             L  E   AI  L +  + +  
Sbjct: 351 HALAHLTGDLDGGIALLDRARLLNPNLAPAWYLGGILRALRGETEVAIENLAHAARLSPV 410

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +    R  + +  ++ +   G +  +   A ++L      + A    A     + ++ +A
Sbjct: 411 DLEMFR--IQVGMAIAHFFAGRLDTALGWAEKALYNLPALLPAQALVAACHALEGRQAEA 468

Query: 280 EVILEKIWKVNP 291
              L  + ++ P
Sbjct: 469 RQALAVVQRLAP 480


>gi|307634806|gb|ADI83951.2| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
          Length = 247

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 5/160 (3%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    KA+ + PD       +   Y+  + W  AI+       +    N+  A + +  
Sbjct: 81  AELKFRKAISLKPDYSDARNNLGVNYLEMQRWDDAISQFKLVMADILFLNQEDARINLGL 140

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     KGD+  +      S+     +++A +   +   + ++   A     K  ++N +
Sbjct: 141 A--YLGKGDLPQALETLRASVSHNPRNLIARVAIGRVYFAMDRAEMAIQEYRKAIEINKN 198

Query: 293 PEIANIY---THLLSENTVGKLKRALRLEEINKESVESLV 329
            + A+ Y    H+  ++ V           I  +S +  +
Sbjct: 199 YQNAHYYLALAHVKQKDYVAAADAFREAIRIAPDSEKGRL 238


>gi|291043534|ref|ZP_06569250.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291011997|gb|EFE03986.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 497

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 90  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 146

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 147 RLL---LEAGRFYAEDNQNKESAAAFEKV 172


>gi|226938998|ref|YP_002794069.1| CheY-like receiver [Laribacter hongkongensis HLHK9]
 gi|226713922|gb|ACO73060.1| CheY-like receiver [Laribacter hongkongensis HLHK9]
          Length = 565

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L+  +AL    +       E +L I A     +  L        D   A++   + LD +
Sbjct: 191 LKGSLALKIGDHLTGKSVYEQVLAIKALPWAQL-GLAKSLTSEKDYPRARQLFEEVLDDN 249

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMI 243
           P      + + + Y   ++   A   L Q  + ++    R R +  ++    +       
Sbjct: 250 PRVMECYDWLARIYESQQDPVNAKQVLQQAAQLSSVVVRRQRKLAEVSMKAGDFSTAQSA 309

Query: 244 ASYH 247
            S  
Sbjct: 310 LSRT 313


>gi|197117503|ref|YP_002137930.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197086863|gb|ACH38134.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 641

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 68/207 (32%), Gaps = 15/207 (7%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A      A+ + +  L+I      A  +L   S R G   +   Y  KAL I+P++ 
Sbjct: 434 ALDARGDLAGAYRQFQETLRINPRSTIAYSNLGALSIRWGQYENGLMYYDKALGITPNSA 493

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              E + +          AIT   Q              + +A + E    G    +   
Sbjct: 494 VALEGMGKALAGLGRGEEAITKFRQALAVDPRLPE----VHLALATELTKAGRPEEALEH 549

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
              + +L   S   +I    +L  Q +  +A     +   ++P    A++  H      +
Sbjct: 550 EEAARQLEPLSPQTAINLGVALAKQGRLAEALDSFTRAVAIDP----ASVEAHFNRGVAL 605

Query: 309 GKLKR-------ALRLEEINKESVESL 328
             L R         R+  I  ++V + 
Sbjct: 606 AGLGRPDEAALEFNRVLAIRPDTVAAR 632


>gi|116255777|ref|YP_771610.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260425|emb|CAK03529.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 625

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 19/212 (8%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW----SRAITFLNQKKKN 217
            E     D   A  +  +A+++ P        +   + L   +               + 
Sbjct: 362 IEKLTKADDEEAIAFLNRAVELDPGLARAWVELYHAHDLMGVFGVNPESNRKVAADVAER 421

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A   + + A       +  A+KGDM     +   +L+L   S       +       +  
Sbjct: 422 AVRLDPSDAEAHAVFGMSLANKGDMGRGKSEFDTALRLAPGSSEILTFYSGYAARFGEPE 481

Query: 278 KAEVILEKIWKVNP-HPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVE--SL 328
           +   +++K+ +++P +P  A        +     E+ V  L+R      +   + +  + 
Sbjct: 482 RGAQMVDKVMRLDPNYPMWASNFFAPAYFMAGRYEDAVTMLER------MTPNNYQKWTW 535

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           V+ S     +G  D+AHA AM  +K  P   +
Sbjct: 536 VVRSSSLAALGRTDEAHASAMETLKQHPEVTV 567


>gi|85058801|ref|YP_454503.1| hypothetical protein SG0823 [Sodalis glossinidius str. 'morsitans']
 gi|84779321|dbj|BAE74098.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 589

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 10/119 (8%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
            K+  D G  AL     ++    I    +  +  + +  +     V  L     +   + 
Sbjct: 55  RKKRADAGRSALSRDEAAL----ISATLREATRKNGKRLYSIADAVETLRSNGFITAGRT 110

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195
           + A  +   + +   +R    Y L+ E       +S      +   + P+  W  +A +
Sbjct: 111 DEATGEFFPLSEDTISRALRNYGLHPEQLDAPAPSS------EMASLHPNHVWEIDASL 163


>gi|83749521|ref|ZP_00946509.1| Hypothetical Protein RRSL_00634 [Ralstonia solanacearum UW551]
 gi|83723796|gb|EAP70986.1| Hypothetical Protein RRSL_00634 [Ralstonia solanacearum UW551]
          Length = 314

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 27/226 (11%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+  A KAL I PD      ++    +   +W      L Q    A E N   AI     
Sbjct: 65  AKMAARKALQIEPDLGEAYASLAHVRLHDWDWVG----LEQDFLRAIELNPGHAIAYYWY 120

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +      G    +     +S ++   + + +   A  L    +  +A   L +  +++P 
Sbjct: 121 AEYLMAAGRAEEAIVRVRQSRQMDPLNSVLNSSVAIILYLARRYDQAREELHQALEIDPN 180

Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
               H  +  +Y      ++ + +++ A+ L      S E+L  +++       +  A  
Sbjct: 181 HFLLHFRLGLVYQQQKLFDDAIAEMQTAVTLSGR---STEALTGLAQT-YAAADMRAAMQ 236

Query: 347 KAMLAMK-------IAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           + + A++       I P       +A++   +  + ++   W + A
Sbjct: 237 QIVDALENASEKHYIHPYN-----MARV-FGSLGDQEQTFGWLEKA 276


>gi|332298358|ref|YP_004440280.1| hypothetical protein Trebr_1727 [Treponema brennaborense DSM 12168]
 gi|332181461|gb|AEE17149.1| hypothetical protein Trebr_1727 [Treponema brennaborense DSM 12168]
          Length = 366

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 9/65 (13%)

Query: 92  LMSIAA---HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMM 146
           +++IA     +   A        +           LL  Q AL         A E    +
Sbjct: 42  ILAIACMYVGDTGGAGTYLQAARKIKLLD----TRLLVAQAALFLRRGDTGRAVEYYLEV 97

Query: 147 LQIPA 151
           L    
Sbjct: 98  LDNEP 102


>gi|320535985|ref|ZP_08036047.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320147145|gb|EFW38699.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 460

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 97/321 (30%), Gaps = 37/321 (11%)

Query: 35  RLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMS 94
            +Y  S   +LS+   FL  ++L     + FL  P  +  +    N  +   A+     +
Sbjct: 3   TMYLISLIAVLSLSIVFLLVFLL-----KTFL-APHKITRIEKNINAGRYTNAIKQAKSA 56

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A +    A +               L        ALAE +     +    + +    R 
Sbjct: 57  LAKNPQNFAARYLLG-KAYLADDKPEL--------ALAEFKIIGKTKVFTNIKEEIEFRS 107

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
                +     +      A +     + + P        + Q +        AI      
Sbjct: 108 T----IARLYLKFDQPEEALKEYALLVKLDPHCADFHYCIGQLFEQKNMSDMAI----NY 159

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            K A + N   A    A  L     G +  +      +LK   ++  A     + L    
Sbjct: 160 YKRAIDLNPKHAPAYAALGLLYFRSGLLSDAKEAIDTALKFGPDNTDALYYQGRLLRETK 219

Query: 275 KKRKAEVILEKIWKVNPHPEI--------ANIYTHLLS-ENTVGKLKRALRLEEI--NKE 323
               A   LEK  +    P +           Y    S E  + + +RAL+L +   +  
Sbjct: 220 DYAHALTALEKAARD---PALRKKCFIEKGRCYLEAQSTEKALFEFERALKLTKQDDSPA 276

Query: 324 SVESLVIVSKIALEMGSIDQA 344
           +++    ++    +    D+A
Sbjct: 277 TLQLRYFLAACYEKQREFDKA 297


>gi|300716070|ref|YP_003740873.1| DNA translocase FtsK [Erwinia billingiae Eb661]
 gi|299061906|emb|CAX59022.1| DNA translocase FtsK [Erwinia billingiae Eb661]
          Length = 1184

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 25/151 (16%)

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397
            G+ D   +     +   P + +F L A+              W Q +      P+    
Sbjct: 542 AGAFDF--SPMDDLVDDGPSEPLFTLPAE-------TDKAAEQWQQHSSTPEHAPV---- 588

Query: 398 DGYLSSVWL--PLSPISK---TLCYFEWKIPTKSP-------EYISSENINFSLEMAYPA 445
              ++  W   P  P+++         W  P   P           S     +  +A   
Sbjct: 589 QQPVTPSWQTPPAQPVAQQPPAPVAPSWHTPPAQPVAQQPQAPVAPSWQAPPAQPVAQQP 648

Query: 446 DDLQSMLNNGKKNHLPSIKKVSSFEDSTIHP 476
               +      +   P  +     EDS  HP
Sbjct: 649 QAPVAPSWQAPQEAAPEPEPAKPAEDSLFHP 679


>gi|293394873|ref|ZP_06639163.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291422624|gb|EFE95863.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 248

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 10/166 (6%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYA 177
             L      L +   + A + L+       Q   T+      +     R+GD ++A++  
Sbjct: 34  TRLQLGLAYLQQGDLDAAQQNLQKAANAAPQDYRTQLA----MALYEQRVGDNSAAEQRY 89

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +AL ++P    V            ++  A    +             ++          
Sbjct: 90  QRALQLAPGNGSVLNNYGAFLCSLGQYVPAQQRFSAAASAPDYGQVADSLENAGYC--FL 147

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             G    +      +LK   +     +  A+      K+ +++++L
Sbjct: 148 RAGQNDKARRLLTRALKADPDKGTPLLVEAEKQFGAGKRAQSQLLL 193


>gi|315500108|ref|YP_004088911.1| tpr repeat-containing protein [Asticcacaulis excentricus CB 48]
 gi|315418120|gb|ADU14760.1| TPR repeat-containing protein [Asticcacaulis excentricus CB 48]
          Length = 593

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 79/274 (28%), Gaps = 31/274 (11%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++  A+   + +     F+ E  V              + A      +            
Sbjct: 323 DMQAAQTEWASIEPDSPFYREAQVR--AAWSLKEAGDLDGAEALFTELSTADPKD----I 376

Query: 159 SLYFESCR----IGDLNSAQRYATKALDISPDAP----WVTEAVVQQYVLAKEWSRAITF 210
            L  E  R      D   A +    A   +             V   Y  + +W +A   
Sbjct: 377 GLTVERARLLWQKDDTAGALKLIE-AYQAAYGDADFGWETWFTVAVLYQASGDWDKAKAA 435

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
             +      + +    + L+   L    K ++        ++L+    S           
Sbjct: 436 AQKGLTLQPDSS--ELLNLLGYGL-IERKENVTEGMTMIRKALEKTPRSGAIMDSLGWGY 492

Query: 271 ISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHL-LSENTVGKLKRALRLEEINKES 324
             Q +  +A   +EK     P  PE    + ++Y  L  +     +  R L LE  +K+ 
Sbjct: 493 YQQGQYVEALEWIEKAIAAEPADPEITDHLGDVYHKLGRTIEARYQWARVLTLEADDKQK 552

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                   +  L+  ++ +A A A    + AP  
Sbjct: 553 -----AAVQAKLDTVTVPEAKAVAE--AETAPTA 579



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 76/259 (29%), Gaps = 36/259 (13%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            + + A +    +L +   R         E     D               P +P V   
Sbjct: 221 GRKDEARKLYTDILGVSEDRLVRQR---LEGLDAKDYR------------KPKSPDVRLI 265

Query: 194 VVQ-------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE---NADKGDMI 243
           +          Y   ++   A+  L   +  A E       L   R L         DM 
Sbjct: 266 LADSLFLSGTLYASEQQSEMALATLRLAQYAAPETAAATPTLDRTRLLAGQVLMRMKDMQ 325

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           A+  +             A + AA SL        AE +  ++   +P  +I        
Sbjct: 326 AAQTEWASIEPDSPFYREAQVRAAWSLKEAGDLDGAEALFTELSTADPK-DIGLTVERAR 384

Query: 304 ----SENTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                ++T G LK     +    ++    E+   V+ +    G  D+A A A   + + P
Sbjct: 385 LLWQKDDTAGALKLIEAYQAAYGDADFGWETWFTVAVLYQASGDWDKAKAAAQKGLTLQP 444

Query: 357 RKEIFLLLAQ---IEQANS 372
                L L     IE+  +
Sbjct: 445 DSSELLNLLGYGLIERKEN 463


>gi|240128497|ref|ZP_04741158.1| hypothetical protein NgonS_07676 [Neisseria gonorrhoeae SK-93-1035]
 gi|254493978|ref|ZP_05107149.1| predicted protein [Neisseria gonorrhoeae 1291]
 gi|268686886|ref|ZP_06153748.1| predicted protein [Neisseria gonorrhoeae SK-93-1035]
 gi|226513018|gb|EEH62363.1| predicted protein [Neisseria gonorrhoeae 1291]
 gi|268627170|gb|EEZ59570.1| predicted protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 496

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 89  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 145

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 146 RLL---LEAGRFYAEDNQNKESAAAFEKV 171


>gi|213028882|ref|ZP_03343329.1| putative protoheme IX biogenesis protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 273

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 77/263 (29%), Gaps = 19/263 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           + A        A++ LE   +        +  TR               + ++A+    K
Sbjct: 1   EAAQQRGDEARANQHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDK 53

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            L+++P  P V     Q Y+    WS  +  +    K       +RA+L     +   D+
Sbjct: 54  LLEVTPRHPEVLRLAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQ 113

Query: 240 GDMIAS----YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
                             +   + +   +  A+ LI  +    A+ I+    K      +
Sbjct: 114 ARAEQGSEGLRTWWKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRL 173

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                 L + N     K   +  +   +       + +  ++ G   +A      A+K  
Sbjct: 174 VLPIPRLRTNNPEQLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQR 233

Query: 356 PRKEIFLLLAQIEQANSHNTDKI 378
           P    +  LA          +  
Sbjct: 234 PDAYDYAWLADALDRLHQPEEAA 256


>gi|194098933|ref|YP_002001998.1| hypothetical protein NGK_1373 [Neisseria gonorrhoeae NCCP11945]
 gi|193934223|gb|ACF30047.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
          Length = 496

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 89  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 145

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 146 RLL---LEAGRFYAEDNQNKESAAAFEKV 171


>gi|167589231|ref|ZP_02381619.1| TPR repeat protein [Burkholderia ubonensis Bu]
          Length = 693

 Score = 38.4 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 13/190 (6%)

Query: 98  HNIPLARKMHSYVSQ--QHTFHNEYLVYL----LEVQIALAERQYNIAHEKLEMMLQIPA 151
            N   A++ H   +   +H    +    +    L     LA      A E    +  +  
Sbjct: 44  GNALRAQEKHDAAADAYRHAIALQPGFRVAHQGLSA-ALLAAGDPLGAIE--HALEGLEP 100

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A   L     RI D   A     +A+ I P+       + +      E+ +A+   
Sbjct: 101 ADADAHCVLARLQQRISDFGKAAELFEQAIAIDPEHARAWAWLGELRSQQGEFGQAVQLC 160

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +  +   E     A   +  +  N +        H    ++ L  +   A    A  L 
Sbjct: 161 RRAIELDPEL--ADAYNFLGFAYHNLNMFAASELSH--RHAVDLNPDDADAHHNLAAVLF 216

Query: 272 SQNKKRKAEV 281
             +K  +A  
Sbjct: 217 RLDKLDEATK 226


>gi|325126866|ref|YP_004286103.1| photosystem I assembly protein ycf3 [Fragaria vesca subsp. vesca]
 gi|324022778|gb|ADY15352.1| photosystem I assembly protein ycf3 [Fragaria vesca subsp. vesca]
          Length = 168

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 10/108 (9%)

Query: 117 HNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSA 173
             E   Y  +   A +E  Y  A     E M     P  R + +Y++     R G+   A
Sbjct: 32  EKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTRNGEHTKA 91

Query: 174 QRYATKALDISPDAPWVTE--AVV-----QQYVLAKEWSRAITFLNQK 214
             Y  +AL+ +P  P      AV+     +Q V   +   A  + +Q 
Sbjct: 92  LEYYFRALERNPFLPQAFNNMAVICHYRGEQAVQQGDSEIAEAWFDQA 139


>gi|301429518|dbj|BAJ12138.1| zinc dependent protein-like protein [Pseudomonas putida]
          Length = 222

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%)

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           +  E      KR   L E N ++  +   ++   ++ G +++A       +  AP + I+
Sbjct: 126 IYEETPGLGAKRFRALLEENPKNDAARYGLAIAQIKGGQLNEARENLKPLLAKAPNEIIY 185

Query: 362 LL 363
            L
Sbjct: 186 NL 187


>gi|170736877|ref|YP_001778137.1| serine/threonine protein kinase [Burkholderia cenocepacia MC0-3]
 gi|169819065|gb|ACA93647.1| serine/threonine protein kinase [Burkholderia cenocepacia MC0-3]
          Length = 1342

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 43/162 (26%), Gaps = 6/162 (3%)

Query: 101  PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH---EKLEMMLQIPATREFAV 157
             +AR+     +         +  +   +        + A    E +  +      R    
Sbjct: 1157 AMAREAVYCATCLDHLPTLGVTMMYLARTHQLAGDRDAARAVSEAILRLADAHRLRAVGH 1216

Query: 158  YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y+    +    D      +  A +         +    + +      ++  A+  + Q  
Sbjct: 1217 YAAIIHAWTQRDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAERGDYDAALAQVGQCL 1276

Query: 216  KNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
               +    R     L+ +  E   + D       A+++ +  
Sbjct: 1277 AWCETSGERYYEAQLLLKQGEYLRRADPRCGGVAALDACRRA 1318


>gi|119895703|ref|XP_616288.3| PREDICTED: hypothetical protein [Bos taurus]
          Length = 1289

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 19/190 (10%)

Query: 98   HNIPLARKMHSYVSQQHTFHNE-YLVYL-LEV--QIALAERQYNIAHEKLEMMLQI--PA 151
                 A K      + H    E  LV L L+   Q AL   + ++A +  E    +    
Sbjct: 1039 GERDKAAKAWLGAGRLHYLMQEDELVELYLQAAIQKALKSEEPSLALKLYEEAGDVFFNG 1098

Query: 152  TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-- 209
            TR         E  R G    A   A +   +  +   +   + +  +  + + +A+   
Sbjct: 1099 TR---HRHRAVEYYRTG----AVPLARRMKAVRTELR-IFNKLTELQISLEGYEKALEFA 1150

Query: 210  FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD---NSIMASICA 266
             L  +        R   +     +           +    +++L LC     S   ++  
Sbjct: 1151 TLAARLSTVAGDQRQELVAFHRLATVYYSLHMYEMAEDCYLKTLSLCPPCLQSPKEALYY 1210

Query: 267  AKSLISQNKK 276
            AK      + 
Sbjct: 1211 AKVYYRLGRL 1220


>gi|222111553|ref|YP_002553817.1| hemy domain-containing protein [Acidovorax ebreus TPSY]
 gi|221730997|gb|ACM33817.1| HemY domain-containing protein [Acidovorax ebreus TPSY]
          Length = 407

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 112/401 (27%), Gaps = 46/401 (11%)

Query: 1   MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
           M   + +  +  + +   +   +    V++ W       S  ++L +L+           
Sbjct: 1   MRAALWFLALFGVAVAVALFAGNNQGTVTLFWPPYRIDLSLNMVLMLLFGGFTLLYAALR 60

Query: 61  VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119
                L  P         +     + AL   L  +       ARK   S ++Q+    + 
Sbjct: 61  ALAALLELPMQARRWRLLQKERAMHGALLDALSQMLGGRFLRARKSAESAIAQERALEDA 120

Query: 120 Y-----------LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
                       L +++  + + A +        L+  L     R          +    
Sbjct: 121 KEALPHGRRLRTLAHMVAAESSHALQDRATREAHLQQALDNIPDRAV--------AIEQE 172

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
               AQ    +A   S D    T A+ +  VL    +R    L  K K ++  ++    L
Sbjct: 173 LCEGAQL---RAARWSLDERDATTALERLSVLPAGTARRTLALRAKLKASRLSHQTEQAL 229

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW- 287
             AR L         A+         L    I  +   A+       +   + +  + W 
Sbjct: 230 ETARLLGKHHAFSPAAAESIVR---GLAMELINGAYDPAQLQRIWLGQLGGDAMQVRAWL 286

Query: 288 ----------KVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                        P P+     +       L       L R    ++    +     + +
Sbjct: 287 LPVWERMTDPAQPPLPDAQVLKLVRALEGSLQALDANWLARIESAQQAAPRNARLQYLSA 346

Query: 333 KIALEMGSIDQAHA----KAMLAMKIAPRKEIFLLLAQIEQ 369
           K  L+     +A       A      + R   +  LA++ +
Sbjct: 347 KACLQRNLWGKAQQLFTQAAQQLTDASLRASAWRHLAELAE 387


>gi|149177414|ref|ZP_01856018.1| TPR domain protein [Planctomyces maris DSM 8797]
 gi|148843747|gb|EDL58106.1| TPR domain protein [Planctomyces maris DSM 8797]
          Length = 559

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 43/166 (25%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            +   YFE+           +  + ++ +P +P     +   Y    ++S AI    +  
Sbjct: 378 GIRGFYFENEE--------TFFQQWVNTNPSSPTAHVHLGLVYASHGQFSEAIACYERAL 429

Query: 216 KNAKEW---------------NRNRAILLIARSLENADK--------------------G 240
               E+                 ++AI L  RSLE  D+                     
Sbjct: 430 AIDPEFTGALINQANDLVTMQQYDQAIQLYQRSLELLDEKLQHLEVGVYHNLGNAWWGKQ 489

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           D   +      +++L    + + +  A   + QN+   A   L   
Sbjct: 490 DAERAIQSYEHAIELSPEHLPSYLALADIYLQQNQPAHAARYLNAA 535


>gi|94313083|ref|YP_586292.1| hypothetical protein Rmet_4156 [Cupriavidus metallidurans CH34]
 gi|93356935|gb|ABF11023.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 1368

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 55/310 (17%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV-QIALAERQYN----IAHEKLEMML 147
           +++A  N   + +       +     E     L+  Q   A    +     A      +L
Sbjct: 185 IALAGGNYRDSARALFEAQARAKNLYEQRTLFLQALQTLQAGNLLDEALAEAERHGGKLL 244

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                    +  L   +      + A +Y  + L +S + P  +  +            A
Sbjct: 245 DDAEV----LRYLTRLALAANKPDIAAKYVERLLKLSANRPTKSTQL------------A 288

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE--SLKLCDNSIMASIC 265
                +  +   +         +AR +   D    +A      E    ++   +I AS  
Sbjct: 289 QAERQRNLRRVSDTEPW-----LARGVVFLDGPHGLALREQVGEFGLRRVAAEAIPASGV 343

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
             K       + +A+   +         E+A    +  +                N +  
Sbjct: 344 VTKPATRDITQAEAQETAKS--------EVATAVANGKT---------------FNPDDY 380

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQS 384
           +   +  ++ L  G +DQA   A  A+   P   ++   LAQ+ + N      +  W + 
Sbjct: 381 D---LAYRVFLAAGKLDQAQRVAQTAVDKLPNDAVWRERLAQVAEWNRQPMVALQSWLKY 437

Query: 385 ALHAMPDPLW 394
           A     +  W
Sbjct: 438 AQETNDERAW 447


>gi|330509084|ref|YP_004385512.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328929892|gb|AEB69694.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 1098

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 92/265 (34%), Gaps = 55/265 (20%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNI----AHEKLEMMLQ 148
           + A ++  AR++ + +S           L+  L  +I   E   +     A      M  
Sbjct: 738 LEAGDLAEARRVTARISSYLDRRGYYTELIR-LNREILELEPDKDSMNWIAQAYAHQM-- 794

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
                               DL +A ++  KALD++PDA +  + +    +   E+  A 
Sbjct: 795 --------------------DLENAAQWYKKALDMAPDA-FSYQGLGMIQLGRGEYDLAE 833

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAA 267
             L +  +        R    + ++L + D      ++  D +E              AA
Sbjct: 834 ESLEKALQIHLGQKDQRGEAAVLQALASIDMSRKSGSAAKDKLE-------------RAA 880

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESV- 325
           + L     +     +L+         E+ANI       ++   +L R+L L    K+   
Sbjct: 881 RILEDLGDRMGEAAVLQ---------EMANIDMMQGHYDSAWPRLARSLELAREAKDRAG 931

Query: 326 ESLVIVSKIALEMGSIDQAHAKAML 350
           E++++     ++  + + A A   L
Sbjct: 932 EAVLLFYLADVDRETGELARATEEL 956


>gi|297537266|ref|YP_003673035.1| HemY domain-containing protein [Methylotenera sp. 301]
 gi|297256613|gb|ADI28458.1| HemY domain protein [Methylotenera sp. 301]
          Length = 140

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 37/130 (28%), Gaps = 2/130 (1%)

Query: 2   LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61
            ++  + F+  L++   +I S+    V I       + S   +L ++             
Sbjct: 4   RKIFWWLFMALLLLAVVLIASNNQGYVLIVRPPYRLQFSFNFLLILIVLGFLLLHYFLRF 63

Query: 62  SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121
             F    PA   +    +        L  G+ ++A  +   A    +         N   
Sbjct: 64  VHFLRFLPANRRNKQEAQRLKASNDWLLEGMHALAEGDFESAE--TAINHAHDLIQNADH 121

Query: 122 VYLLEVQIAL 131
             LL      
Sbjct: 122 EKLLAALALE 131


>gi|294665118|ref|ZP_06730421.1| polysaccharide deacetylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605119|gb|EFF48467.1| polysaccharide deacetylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 139

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 3/110 (2%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A   L    K++    R RA L   R L+   +     +     E+LKL     +A+   
Sbjct: 9   ARLVLPTAVKSSD---RQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPAFALAANNL 65

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
                 Q +  ++   LE   K++P   +A++           + K    
Sbjct: 66  GFVYYRQGRFTESARWLENTLKIDPSRAVASLNLGDAYAKAGDRDKARKA 115


>gi|323525751|ref|YP_004227904.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323382753|gb|ADX54844.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 287

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 6/152 (3%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL         Q   +      +L  P     A   L   +   GD   A     +A  +
Sbjct: 99  LLRADALRMTGQPEASASAYRQLLPTP-LAARAHRGLGLIAGAQGDFGLAASELQQAAQL 157

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P    V   +    + A + + A   L +      E +     ++   +L     G   
Sbjct: 158 APTDATVLSDLGYARLRAGDVAGARVPLMKA----AELDSANPKIVSNIALFLLANGQPA 213

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +    +   KL  +   A    A  + +  +
Sbjct: 214 EA-QALMNQQKLALDVRAAIRSDAAKVAAAGR 244


>gi|240118246|ref|ZP_04732308.1| hypothetical protein NgonPID_07261 [Neisseria gonorrhoeae PID1]
 gi|268603955|ref|ZP_06138122.1| predicted protein [Neisseria gonorrhoeae PID1]
 gi|268588086|gb|EEZ52762.1| predicted protein [Neisseria gonorrhoeae PID1]
          Length = 496

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 89  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 145

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 146 RLL---LEAGRFYAEDNQNKESAAAFEKV 171


>gi|239999214|ref|ZP_04719138.1| hypothetical protein Ngon3_07005 [Neisseria gonorrhoeae 35/02]
 gi|240113189|ref|ZP_04727679.1| hypothetical protein NgonM_06391 [Neisseria gonorrhoeae MS11]
 gi|240123794|ref|ZP_04736750.1| hypothetical protein NgonP_07624 [Neisseria gonorrhoeae PID332]
 gi|240125984|ref|ZP_04738870.1| hypothetical protein NgonSK_07167 [Neisseria gonorrhoeae SK-92-679]
 gi|268595038|ref|ZP_06129205.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268599269|ref|ZP_06133436.1| predicted protein [Neisseria gonorrhoeae MS11]
 gi|268682418|ref|ZP_06149280.1| predicted protein [Neisseria gonorrhoeae PID332]
 gi|268684576|ref|ZP_06151438.1| predicted protein [Neisseria gonorrhoeae SK-92-679]
 gi|268548427|gb|EEZ43845.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268583400|gb|EEZ48076.1| predicted protein [Neisseria gonorrhoeae MS11]
 gi|268622702|gb|EEZ55102.1| predicted protein [Neisseria gonorrhoeae PID332]
 gi|268624860|gb|EEZ57260.1| predicted protein [Neisseria gonorrhoeae SK-92-679]
 gi|317164499|gb|ADV08040.1| hypothetical protein NGTW08_1072 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 496

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 89  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 145

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 146 RLL---LEAGRFYAEDNQNKESAAAFEKV 171


>gi|254409666|ref|ZP_05023447.1| NACHT domain family [Microcoleus chthonoplastes PCC 7420]
 gi|196183663|gb|EDX78646.1| NACHT domain family [Microcoleus chthonoplastes PCC 7420]
          Length = 1170

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 91/299 (30%), Gaps = 45/299 (15%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATRE 154
            + P  R+       +    +   + +L+ Q A ++   ++ +  ++ +       P T  
Sbjct: 770  DHPAVRRAAVQEIAKGWKDDPDTLPMLK-QKAQSDGDEDVRYAAVQELAKGWKDDPDTLF 828

Query: 155  F-----------AVYSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
            +           AV S   +    G   D ++      KA      A            L
Sbjct: 829  WLKQKAEYDDNPAVRSAAVQELAKGWKDDPDTLPMLKQKAQSDDYPAVRSAAV----QEL 884

Query: 201  AKEWSRAITFL----NQKKKNAKEWNRNRAILLIARS-----------LENADKGDMIAS 245
            AK W      L     + + +   + R  A+  +A+             + A   D  A 
Sbjct: 885  AKGWKDDPDTLPWLKQKAQSDDDMFVRRAAVEELAKGWKDDPDTLPMLKQKAQSDDDSAV 944

Query: 246  YHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
               A+E +    K   +++      A+S      +R A   + K WK +P          
Sbjct: 945  RSAAVEEIAKGWKDDPDTLPMLKQKAESDDHWAVRRAAVEEIAKGWKDDPDTLPWLKQKA 1004

Query: 302  LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID---QAHAKAMLAMKIAPR 357
               ++   +      L +  K+  ++L I+ + A           A  +     K  P 
Sbjct: 1005 QYDDDDNVRFVAVQELAKGWKDDPDTLPILKQKAQSDDHWAVRYAAVQEIAKGWKYDPD 1063


>gi|297584408|ref|YP_003700188.1| tetratricopeptide repeat-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297142865|gb|ADH99622.1| Tetratricopeptide repeat protein [Bacillus selenitireducens MLS10]
          Length = 423

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 94/283 (33%), Gaps = 51/283 (18%)

Query: 133 ERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           +  +  A + +E ++      T+     ++      +G ++ +     + +   PD   +
Sbjct: 14  QGHHEEALKAVEGLIPEADDETK----RTIAELYFELGLVDQSLVLLEELMFQYPDHGEL 69

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                + Y    +   AI  L++ KK    + ++R +L      +  ++           
Sbjct: 70  FAFAAECYSELGKEDEAIDMLSEVKKGDPAFIQSRLLLADLYEADGLEEVAEKKLLEALE 129

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKA---------EVILEKIWKVNPHPEIANIY-- 299
           E         +  +   +  +++ + +KA         +  L + + V+P   +A  Y  
Sbjct: 130 E----EPEDAVLQLGLGEFYLNRGEYQKAIYYFRQVILQKKLPEEFPVDPELRLAEAYSA 185

Query: 300 ------------THLLSENTVGKL---------------KR--ALRLEEINKESVESLVI 330
                         L  E     L                R    RL E + +   +  +
Sbjct: 186 IGEFENALEHYKLGLGEEEPPDALFGYGVTALQLDDTETARWAFERLLEADPDFTTAYPL 245

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372
           + +  ++    D+A A     +K     ++++L +A+++ +  
Sbjct: 246 LGRALIKDQLYDEAVAILEEGIKKDEFNEDLYLEMAKLQVSKG 288


>gi|82617844|gb|ABB84838.1| Tetratricopeptide repeat-TPR protein [uncultured delta
           proteobacterium DeepAnt-32C6]
          Length = 333

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 65/207 (31%), Gaps = 21/207 (10%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +A+++         A+ + Y    E   A+    +  + A       A L +A     
Sbjct: 123 FRRAIELDGRDVIAVTALAKAYEQQGELEDALEQWERAVEIAAA----DAGLHLALGRTL 178

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-------KKRKAEVILEKIWKV 289
           A  G++ ++     E+L+L      A     ++            ++R+     ++ +  
Sbjct: 179 ARLGELTSAVDAYKEALRLEPGLASAWFNLGRAYARLGELAEEASERRRLTKQQQEAYTQ 238

Query: 290 NPH--PEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                P  A  + +L            ++           +   +L  ++      G   
Sbjct: 239 TVTCDPSFAKAWYNLAITYFTQGRVADEIGALESAVRARPDYPGALYNLAHAYEGTGDQA 298

Query: 343 QA---HAKAMLAMKIAPRKEIFLLLAQ 366
           +A     K +   +  P +  F+L A+
Sbjct: 299 RALKTWTKYIRVSETDPAERKFVLEAR 325


>gi|32474721|ref|NP_867715.1| hypothetical protein RB7240 [Rhodopirellula baltica SH 1]
 gi|32445260|emb|CAD75262.1| hypothetical protein-transmembrane prediction [Rhodopirellula
           baltica SH 1]
          Length = 1038

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/114 (9%), Positives = 31/114 (27%), Gaps = 4/114 (3%)

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
            M+Q        +      +      + A+    K +D  P+                +W
Sbjct: 210 EMVQRNPDDLRPLIGAARSALDQNLFDEARDSLDKIVDRHPNYATAAAMRSLLLAEQADW 269

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +     L     +       R     A  + +    +  ++    +++ +L  +
Sbjct: 270 A----TLESSLASLPAEVIQRRHFWTAMGMWSEAVNNAGSAARAYLQAAQLDPD 319


>gi|332298588|ref|YP_004440510.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
 gi|332181691|gb|AEE17379.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 987

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 97/305 (31%), Gaps = 28/305 (9%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L     ++ + +  LA +++  + +        L  L    + +   Q + A    + ++
Sbjct: 13  LSRAKAAVLSRDFELAARLYKAILKAAPDDGATLEAL--GLMYVRAGQDSNALPVYKRLV 70

Query: 148 QIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +          A+  +Y    R+     +     +A+ + PD   +   +   Y L   +
Sbjct: 71  EKNPGDCKALTALGGVYR---RLDLYQESIEALEQAISLQPDQTEIYYNLGFTYKLMGMY 127

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A+       +           L    SL +    D   +       LKL  N  +  +
Sbjct: 128 QDALECFKVVIEENPNDILAYNHLGSLYSLRH----DSANAIASYRRGLKLDPNHPVLHL 183

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR------LE 318
             AK      K  +A++  E   K  P       +   L+      + R  +      L 
Sbjct: 184 NLAKEFEILGKDEEAKLEYESALKAKP------GWADALNGYASFLMARNKKHEAFDLLA 237

Query: 319 ---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHN 374
               +  +    LV ++ +  + G+  +A  +   A+   P  +   L LA + +     
Sbjct: 238 QGLALQPDDPAMLVSMADLQTQSGNYAEAFKQYRSALSRNPADENALLGLATVYEKEGKF 297

Query: 375 TDKIL 379
            + + 
Sbjct: 298 PESVQ 302


>gi|237749148|ref|ZP_04579628.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes OXCC13]
 gi|229380510|gb|EEO30601.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes OXCC13]
          Length = 391

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 6/151 (3%)

Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L  P      +  A Y L  +  + G L+ A+    K L  +P +  
Sbjct: 84  GETERAIRMHQNLLLRPDLPAEQQMQAQYELGQDFLKAGLLDRAEEVFQK-LTETPYSIQ 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248
              A+++ +   KEW +AI      + +     N+  A      + +         +   
Sbjct: 143 ARRALLEIFQREKEWQQAIEAAEALQNSGTGNRNKQIAQFYCELAEDELVNRHPEKAIPL 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              +L     S  A+I    + ++     +A
Sbjct: 203 LETALATDRMSARATILYGDAQLAMGNTEEA 233


>gi|168701962|ref|ZP_02734239.1| hypothetical protein GobsU_20718 [Gemmata obscuriglobus UQM 2246]
          Length = 224

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 7/143 (4%)

Query: 164 SCRIGDLNSAQRYATKAL--DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
           + R  D    + +AT AL               +Q  V   + +R  T L+   + A ++
Sbjct: 83  ALRDDDPLV-KHFATDALWELWFRAGTEEQNQRLQDAVRESDANRTRTELDALLREAPDF 141

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A     R++    +G+   +  D    L+L  +   A+    + L+  N+ R A  
Sbjct: 142 ----AEAHNQRAIWFFKRGEYARAVEDCEAVLRLNPHHFGAAAGLGQCLLKLNRPRAALR 197

Query: 282 ILEKIWKVNPHPEIANIYTHLLS 304
              +  ++NP+ ++ +    L  
Sbjct: 198 AFRQALEINPNLDLHDAVRALEE 220


>gi|78061915|ref|YP_371823.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77969800|gb|ABB11179.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 740

 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 70/230 (30%), Gaps = 11/230 (4%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
            A +     +     R   +Y+      R+G  + A     + L   PD      +    
Sbjct: 245 EALDAFNEAIAADPARIDVLYNSAVALERLGRADEALARCERVLSFDPDHVRAHASRGNA 304

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +  K    A+    +    A + +    +     +L    + D   + +DA  +L    
Sbjct: 305 LLQLKRHDDALVAYARAL--ALDPHSAETLCNRGTALRYLKRYDDALASYDA--ALARDA 360

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLK 312
               A    +  L   ++  +A   L++   +   P+ A  +      H  +  T   L 
Sbjct: 361 RFAEAWTNRSSVLQDLHRYDEAMASLDRALALR--PDHATNWLNRGNLHFETARTDDALA 418

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
              R   +  +  E+    + + L  G   +   +    ++ A     + 
Sbjct: 419 SYDRAIALQPDYAEAHFARASLYLIEGDFARGWPEYEWRLRDAQLARHYR 468


>gi|327194224|gb|EGE61088.1| putative adenylate cyclase protein [Rhizobium etli CNPAF512]
          Length = 590

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 70/197 (35%), Gaps = 14/197 (7%)

Query: 173 AQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRA 226
           A+    +A+++ P+  +     A+         WS +    I    +    A   + +  
Sbjct: 364 ARDLLQRAVELDPNFASAHAFLALTHGLAYLNRWSESPQRSIEQAEEAAMLAVARDDSDP 423

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           +   A S+          +  +A  ++ L  N     +   ++L+   +  +A    ++ 
Sbjct: 424 VAHWALSVVRLYSRQHDRAISEAERAILLNPNFAEGQVSLGEALLYSGRSEEALACFDRA 483

Query: 287 WKVNPH-PEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             +NP+ P++     A  +  L        ++  L+    N  +  S  +++     +  
Sbjct: 484 RVLNPYFPDVVLHFQAWAWFQLRRYEEA--VELLLQRVNRNPVTDVSRALLAACYGHLDR 541

Query: 341 IDQAHAKAMLAMKIAPR 357
            ++A A     ++I P 
Sbjct: 542 FEEARATWQEVLRINPD 558


>gi|297793915|ref|XP_002864842.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310677|gb|EFH41101.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 650

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 54/153 (35%), Gaps = 12/153 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           GL S+ +    L++K       +    +     L          +++ A E  +  L + 
Sbjct: 491 GLHSLCSQQYKLSQKYIKAAVGRSRECSYAWSNL--GISLQLSDEHSEAEEVYKRALAV- 547

Query: 151 ATR------EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           +T          + +LY +  +      ++   +KAL++ P        +   +V  + W
Sbjct: 548 STEDQAHAIFSNLGNLYRQKKQ---YEVSKAMFSKALELKPGYAPAYNNLGLVFVAERRW 604

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
             A +   +  +     +  ++ LL A ++   
Sbjct: 605 EGAKSCFEKALEADSLLDAAQSNLLKATTMSRL 637


>gi|270339621|ref|ZP_06005470.2| TPR domain protein [Prevotella bergensis DSM 17361]
 gi|270334324|gb|EFA45110.1| TPR domain protein [Prevotella bergensis DSM 17361]
          Length = 536

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 65/264 (24%), Gaps = 38/264 (14%)

Query: 74  HMLHKRNYDKGYKALYTGLMSI-----------AAHNIPLARKMHSYVSQQHTFHNEYLV 122
                RN   G++ L  G++                      K            +E L 
Sbjct: 284 RERQIRNMSAGFRELADGILPELRRSRLIINYETIGRSDEQIKQQYASDPARLSPDELLY 343

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
                  A  E          +   +I      A  +L   +   G+   A+ Y  KA  
Sbjct: 344 ------AATLESGTANKEAIYKKTAEIYDKDYRAFNNLATLAFNEGNEVLAKEYIQKAFS 397

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA--RSLENADKG 240
            +P AP     +    +       A + L               + +     +    + G
Sbjct: 398 KNPKAPEANANLALIALKHGNLKEAESNLANAIDANGFGEVLGNLNIAKGNYATAVQNFG 457

Query: 241 DMIASYHDAIESLKLCDNSIMASI--------------CAAKSLISQNKKRKAEVILEKI 286
           D  +  + A  +  L  +   A                  A  L  Q     A+  L+K 
Sbjct: 458 DSNS--NSAALAQILNKDYAAAVATLKAIKKGDAMTDYLMAVVLNRQGNIATAKDYLQKA 515

Query: 287 WKVNPHPEIANIYTHLLSENTVGK 310
              +P       Y     E +  +
Sbjct: 516 IAADPR---LAAYAAKDLEFSNQR 536


>gi|329115647|ref|ZP_08244369.1| TPR Repeat-Containing Protein [Acetobacter pomorum DM001]
 gi|326695075|gb|EGE46794.1| TPR Repeat-Containing Protein [Acetobacter pomorum DM001]
          Length = 287

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 5/179 (2%)

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNK 275
            +E     A+ L+    E +   ++    H  IE  +   +S  A +   AA + +S  +
Sbjct: 88  GQEAKHCHALALLEAGDEESAAAELDELAHQPIEHAERAPSSFRAGLEEDAADAWLSAGQ 147

Query: 276 KRKAEVILEK--IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVIVS 332
             KA   ++    ++ +    +      L  +     +K    L     +   E  V+++
Sbjct: 148 PEKALRSVDYGLAFEDDTRLHLLRARALLAQDQADVVVKELSALVAKKPDIGAEGYVLLA 207

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                +G +D A      A++I P     LL   I +    +        Q  L   PD
Sbjct: 208 SAERRVGQLDAAAMYVAHALEIEPENPAALLERGIVRERKGDATGAQADWQRVLDLAPD 266


>gi|322820744|gb|EFZ27273.1| hypothetical protein TCSYLVIO_6526 [Trypanosoma cruzi]
          Length = 570

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 80/245 (32%), Gaps = 16/245 (6%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYFESC-RIGDLNSAQRYATKALD 182
                 +     +  +   M ++   R      VY  Y  +  +  +L +    +   ++
Sbjct: 278 AMAYFHDGDVENSTVEFANMRRVAPWRLADPALVY--YSTALWQRKELGTLGSLSQTLIN 335

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             P +P     V   Y LAKE   ++  LN+  +   ++    A     R  E       
Sbjct: 336 EMPASPITLCVVANNYSLAKESKESLCMLNRAIQVDHDF----AYAHTLRGYELLYLDLK 391

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI----ANI 298
             +     E++ +      A     +        +KA    ++   +NP P I    A  
Sbjct: 392 SEAVDAFHEAILIDGGHYNAYAGLGELYFRSEDLQKARNYFQQAISINPLPTIMNRYAAT 451

Query: 299 Y--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           Y       E+    L+        +  ++ +    +++ + +G   +AH + +   K  P
Sbjct: 452 YHRRDATRESLNEALRIYESAIRRHPTNLGARHQRAEVLIRLGRFHEAHDELLGMTKECP 511

Query: 357 RKEIF 361
            + + 
Sbjct: 512 DEAML 516


>gi|269104069|ref|ZP_06156766.1| MSHA biogenesis protein MshN [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163967|gb|EEZ42463.1| MSHA biogenesis protein MshN [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 388

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 15/110 (13%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           NR  A L   R+ +   + D   +     +++K   + I A    A +L  Q   R A  
Sbjct: 198 NRQLADLEYNRAEKALAQADSQQAIISLQKAVKYRPDWIEARQKLAATLYGQGSVRGAIA 257

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            LE+                L  +  V +L  A  L +  +   E+ + +
Sbjct: 258 TLEEG-------------LELAPQQPVLRLTLAKLLAQ--ESQPEAALAI 292


>gi|241206351|ref|YP_002977447.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860241|gb|ACS57908.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 289

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 11/137 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q   A   ++ A +     L     R +    L ++     D   A    +KA+ ++P
Sbjct: 151 AGQDDQAFNDFDKAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++          Y+   +   A    N    +A E N N A     ++L    +GD   +
Sbjct: 204 NSAEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259

Query: 246 YHDAIESLKLCDNSIMA 262
                 ++ L      A
Sbjct: 260 ARSYRHAIGLDPKYQPA 276


>gi|145346887|ref|XP_001417913.1| TPR-repeat containing protein [Ostreococcus lucimarinus CCE9901]
 gi|144578141|gb|ABO96206.1| TPR-repeat containing protein [Ostreococcus lucimarinus CCE9901]
          Length = 544

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 68/235 (28%), Gaps = 8/235 (3%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP---DA 187
                  +A +  +       T   A +        +G+   A+    K + + P    +
Sbjct: 177 EKAGNIALARKYYDAATAADKTHAAAWHGWGSMEKNLGNYQRARELYIKGVRLVPPMDAS 236

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             +  ++    +     S A     Q  +   E       +  + ++  A  GD   +  
Sbjct: 237 AHLYHSLGVMALERGRISEAREHFRQGVRT--EAGAKSGAIWRSWAMLEAKAGDEEQARK 294

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLS 304
              + L +   S    +             +A+ +L K  K+NP   H   A        
Sbjct: 295 LFQKGLMVAPKSKFIWLAWGVWEAKLGYCDRAKELLTKGCKLNPLDTHLLQALAKLEAEQ 354

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            N     K   +   ++ +   +    +      G ID+A       + + P+  
Sbjct: 355 GNLEQARKYFEQGTMMDPQHQANWNAWAMAEWRAGEIDRARNLFQRGVWVNPKNR 409


>gi|169851796|ref|XP_001832587.1| pre-mRNA-splicing factor CLF1 [Coprinopsis cinerea okayama7#130]
 gi|116506441|gb|EAU89336.1| pre-mRNA-splicing factor CLF1 [Coprinopsis cinerea okayama7#130]
          Length = 739

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 50/172 (29%), Gaps = 13/172 (7%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI---ARSLENADKGDMIASYHDAIES 252
           +                 +     E    R  + +       E  +  D   +      +
Sbjct: 350 ELEAATGRVREVYERAVAQVPPGGEKRHWRRYIFLWLNYALFEEIETKDYQRAREIYQTA 409

Query: 253 LKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
           +KL            +  AK  + + + + A  IL     + P   +   Y  L  E  +
Sbjct: 410 IKLVPHKQFTFAKLWLMYAKFEVRRLELQSARRILGTAIGMCPKEALFKGYIDLEIE--L 467

Query: 309 GKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +  R   L     E +  +  + +  +++  ++    +  A   L +  +P
Sbjct: 468 REFDRVRTLYEKYLEFDPSNSPAWIKYAELEAQLQDFARCRAIFELGVSQSP 519


>gi|116621215|ref|YP_823371.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224377|gb|ABJ83086.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 388

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 81/224 (36%), Gaps = 15/224 (6%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           + +A+    L R +      Q        + L + QI+    +  +    L MM+  P +
Sbjct: 145 LHVAS--AQLDRALALAARLQELAPQNPQILLTQYQIS----RQVMYQSLLGMMMVSPDS 198

Query: 153 REFAVYSLYF-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
            E  +  +   E  R GD  +A     +A+ ++P  P V   + +    + + + +    
Sbjct: 199 AE--MRMIMGGELGRQGDRAAAIAQYREAIRLNPKLPGVHYELAELLRSSSD-AASNAQA 255

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +++ + A   N    +         + KGD  A+     ++L L      A    A   I
Sbjct: 256 DEEYRAAIGLNPYDILSWRRLGEIASAKGDFSAAEEHYKKALALQPKDSDAKTGLAIVFI 315

Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310
           S N+   A  +LE   K +P     H  ++ +Y          +
Sbjct: 316 STNRTTGAIHLLEDALKDDPANLVAHYRLSGLYRRAGRSADAER 359



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 54/164 (32%), Gaps = 8/164 (4%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G  + A      A +++  +   H      L  LL  + +        A E+    + +
Sbjct: 212 QGDRAAAIAQYREAIRLNPKLPGVHY----ELAELL--RSSSDAASNAQADEEYRAAIGL 265

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                 +   L   +   GD ++A+ +  KAL + P        +   ++     + AI 
Sbjct: 266 NPYDILSWRRLGEIASAKGDFSAAEEHYKKALALQPKDSDAKTGLAIVFISTNRTTGAIH 325

Query: 210 FLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIE 251
            L    K+         R   L  R+  +AD    + S+    +
Sbjct: 326 LLEDALKDDPANLVAHYRLSGLYRRAGRSADAEREMESFRHYQD 369


>gi|67539936|ref|XP_663742.1| BIMA_EMENI Protein bimA [Aspergillus nidulans FGSC A4]
 gi|40738734|gb|EAA57924.1| BIMA_EMENI Protein bimA [Aspergillus nidulans FGSC A4]
          Length = 788

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS------------RAITFLNQKKK 216
           D + A +   +A  + P   +       +Y  ++ ++              + F  Q  +
Sbjct: 596 DHDQALKCFKRATQLDPHFAYGFTLQGHEYADSRHYNAWYGLGTVYDKMGKLDFAEQHFR 655

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           NA + N + A+L+    L      +  ++      +  L  +S++A    A++L+     
Sbjct: 656 NAAKINPSNAVLICCIGLVLEKMNNPKSALIQYNRACTLAPHSVLARFRKARALMKLQDL 715

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           + A   L+ +  + P     H  +  +Y  L  +     +K       ++ ++ 
Sbjct: 716 KSALTELKVLKDMAPDEANVHYLLGKLYKMLRDKGNA--IKHFTTALNLDPKAA 767


>gi|317152684|ref|YP_004120732.1| diguanylate cyclase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942935|gb|ADU61986.1| diguanylate cyclase [Desulfovibrio aespoeensis Aspo-2]
          Length = 819

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 3/131 (2%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y  +  G +S  A ++  A   +   + Q       L  L   +IA  +   +   E L 
Sbjct: 690 YALMRLGSISEQAGHLKKAANHYKKAAAQPGGERMVLRPL--ARIAYRQGDIDATREYLH 747

Query: 145 MMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           + L        A++ L       G D   A+  A ++  +SPD     E +V+      +
Sbjct: 748 LALNADHNDHQAMHMLARLYLDQGEDPQIAEVLARQSSALSPDKDVYWETLVEALEAQGK 807

Query: 204 WSRAITFLNQK 214
              A+    + 
Sbjct: 808 VEEAVKVAARA 818



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 9/156 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A    ++  A  + E +  I      A+Y+L + + R+GDL  A++   + L   P   +
Sbjct: 632 AQL-GRFEDARRQFEQVSAIDKKDVLALYNLGWANHRLGDLKKAEQAYRQCLKADPGHVY 690

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYH 247
               +      A    +A    N  KK A +    R +L  L   +    D        H
Sbjct: 691 ALMRLGSISEQAGHLKKA---ANHYKKAAAQPGGERMVLRPLARIAYRQGDIDATREYLH 747

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            A+ +         A    A+  + Q +  +   +L
Sbjct: 748 LALNADHNDHQ---AMHMLARLYLDQGEDPQIAEVL 780


>gi|302524879|ref|ZP_07277221.1| thioredoxin [Streptomyces sp. AA4]
 gi|302433774|gb|EFL05590.1| thioredoxin [Streptomyces sp. AA4]
          Length = 306

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 42/149 (28%), Gaps = 3/149 (2%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
            +    +            E + A     Y  A    E +L      E A  +L      
Sbjct: 158 RAAEEARGPVEEPEDPRFTEAEEAFERGDYAAAQAAYERILDAEPANELAKNALAQVKFT 217

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRN 224
                +A   A +  +  P       A     +  ++   A   L    ++    + NR 
Sbjct: 218 ARA-EAADPSAREKAEADPKDIDAQLAAADLDIAEQDVEGAFRRLVDVVRRTAGDDRNRV 276

Query: 225 RAILLIARSLENADKGDMIASYHDAIESL 253
           R  L+    L +     ++ +  D   +L
Sbjct: 277 REHLVALFELFDPADERVMKARRDLASAL 305


>gi|116250229|ref|YP_766067.1| adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115254877|emb|CAK05951.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 623

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 44/133 (33%), Gaps = 7/133 (5%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L  ++    D +   + A +A++++P+ P    A+ +  V   ++  A+    + ++  
Sbjct: 463 GLALQA----DYSGGLQAAQRAVELNPNDPDSMIALAKAQVRFGDYPDAVANAERARRLH 518

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                  A +           G    +     E L          +  A       +  K
Sbjct: 519 PMAPEYYAYVH---GQALYADGRREEAATVISECLVRAPRDANCLLIQAALQGGSGELEK 575

Query: 279 AEVILEKIWKVNP 291
           A+  +  + + +P
Sbjct: 576 AQATMASLVEAHP 588


>gi|27379562|ref|NP_771091.1| hypothetical protein blr4451 [Bradyrhizobium japonicum USDA 110]
 gi|27352714|dbj|BAC49716.1| blr4451 [Bradyrhizobium japonicum USDA 110]
          Length = 737

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 91/303 (30%), Gaps = 40/303 (13%)

Query: 92  LMSIAAHNIPL---ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
           L+ + AH+      AR++   V       ++    L    +      +  A    E  + 
Sbjct: 43  LLGMCAHDGRRLEEARELLERVIALDPRLHDAHNNL--ATVHFDLGNFEEARRCQERAIA 100

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +      A+ +L      +G    A     +A+ I PD            ++  +  RA 
Sbjct: 101 LKPNFVVALTNLGNTLMHLGQYEQALELHERAIKIKPDYADAFCNRGMVEIVLGQIMRAK 160

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              ++       +    A  ++  S+ + +      +      +L +   S        +
Sbjct: 161 ESFDRAL----LFQPRHAEAIVGSSMVSMELRHHEEAAAKLATALAIKPGSPRILAQRGR 216

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
                 +   A    E    ++P  E+A             + K                
Sbjct: 217 LSYELQRLEPALADFEAALAISPKLELAL------------RGK---------------- 248

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
              ++  L MG   QA A A   ++  PR E+ L L     +N    D  + +   AL  
Sbjct: 249 ---AQACLVMGKTAQAMAAATALIEQNPRSEVGLALMGFSHSNQGEMDAAIEYLDRALAI 305

Query: 389 MPD 391
            PD
Sbjct: 306 RPD 308


>gi|269968109|ref|ZP_06182145.1| hypothetical protein VMC_35750 [Vibrio alginolyticus 40B]
 gi|269827282|gb|EEZ81580.1| hypothetical protein VMC_35750 [Vibrio alginolyticus 40B]
          Length = 1258

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 96/276 (34%), Gaps = 22/276 (7%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL +    + + Q+  A    +  +Q+  ++ +A  SL        +  +A++   +AL
Sbjct: 394 AYLDQGDALVEKGQFKQAESAYQKAIQVDKSQPYAYSSLGSLYLVQENYAAAEKVFKQAL 453

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLEN 236
            +           +   +  ++WS A          Q+K  A++    ++ +++ R    
Sbjct: 454 QLDSSNSSALRGRLDVRIQQQDWSGAEALARSYSAPQQKVVAEKIASIKSEVILTRLRIA 513

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI 295
             + D         E + L   S    +  A  + S   K +A+ ++   W  + + PE+
Sbjct: 514 IAQNDQATMKASVEELIALQPTSPWLRLDIADVVHSMGDKVRADTLMSD-WATSSNDPEM 572

Query: 296 ANIYT-HLLSENTVGKLKRALRLEEINKESVESLVI--VSKIALEMGSIDQAHAKAMLAM 352
              Y  +L  +  V   +    LE I +  +   +   ++++ L+    D          
Sbjct: 573 KFAYALYLAQDFNVN--EAIAELESIAQHDMTDAMQRNLTRLKLDAQLRDIQTRYLASPE 630

Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
            +         +A +    S    +I       + A
Sbjct: 631 SV---------MATLRALESDYQGQIQP-LARLVSA 656


>gi|239908010|ref|YP_002954751.1| hypothetical protein DMR_33740 [Desulfovibrio magneticus RS-1]
 gi|239797876|dbj|BAH76865.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 493

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 62/215 (28%), Gaps = 6/215 (2%)

Query: 46  SILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK 105
           S+    L A +LLF ++                     G  A+  G  ++A  +   A +
Sbjct: 33  SVAGVVLVAGLLLFGLAGCGSGAKGRTSG-KEPVVSGSGASAIAAGDAALAHGDRAEAGR 91

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
           ++    +        L  L    +AL    Y  A +  +           A+  L F   
Sbjct: 92  LYLAAQKSGADAATVLTRL--GDLALGAGDYGEAAQAYKKAFAANPKYAPALQGLGFAYY 149

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G+   A  Y  KAL + P        +            A+   +     A + +   
Sbjct: 150 LGGNKAQAGPYLQKALALDPALSRAAALLGAIENREGRPDAALAVSDASLGAAFDPDVEN 209

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
              +    L   ++    A++  A  + K      
Sbjct: 210 NRGISLMLLGRGEEA--AAAFRKASSAKK-SPKFA 241


>gi|197116999|ref|YP_002137426.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197086359|gb|ACH37630.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 645

 Score = 38.4 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 4/188 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + +  Y +   T   +  + L   +  +  ++ + A E     +++      A   L   
Sbjct: 389 QALEQYQALIKTNPADPALRLKLARAYVNSKELDAAAEAYHAAIKLDGESVDAHRELANL 448

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +   ++ A     + L +  D   V  A+   YV  K +      L +  K+  + + 
Sbjct: 449 QRKRNMIDEAAAEYQEVLRLKKDDQEVRTALTAIYVKNKNYDA----LAKLLKDGVDLSP 504

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +         L    + D  A+     E++ L  +   A     +  +      +A+  L
Sbjct: 505 SDPNAHYKLGLVYEFQKDYDAATAQYKEAVTLKPDHAKALNAMGRVQMKDGHIAEAKESL 564

Query: 284 EKIWKVNP 291
           E   K +P
Sbjct: 565 EAARKADP 572


>gi|307330870|ref|ZP_07610004.1| transcriptional regulator, LuxR family [Streptomyces violaceusniger
           Tu 4113]
 gi|306883495|gb|EFN14547.1| transcriptional regulator, LuxR family [Streptomyces violaceusniger
           Tu 4113]
          Length = 936

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 87/294 (29%), Gaps = 56/294 (19%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G+      +    R     +          L     +Q  +   ++  A    + ++
Sbjct: 547 LSRGV------DERAVRAAERVLETVRLSDRTMLTVHAALQTLVYADRHATATSWCDRLI 600

Query: 148 QIPATREFAVYSLY--------FESCRIGDLNSAQRYATKALDISPDAPWVTEA------ 193
           +   T E    +L           S R+G L    RYA +AL+  P   W          
Sbjct: 601 E--ETSERGAKALLAYFCVLRAQISLRVGRLRDTVRYAERALEELPARGWGVTVGMPLGM 658

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD----- 248
           ++  +        A   L +        NR     L AR+      G   A+  D     
Sbjct: 659 LINAHTAMGNHDAAAELLARPVPEEMYRNRFGLHYLYARARHQLATGRQHAALTDFRACG 718

Query: 249 -AIESLKLCDNSIMASIC----AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
             + +  L      A++     AA++ ++   + +A               +A     L 
Sbjct: 719 EKMAAWGLDS---PATLTWRLGAAETWLTLGGQERAAR-------------LAEEQLELA 762

Query: 304 SE-NTVGKLKRALRLEEINKESVESLVIVSKIAL-----EMGSIDQAHAKAMLA 351
            E ++  +      L      +    + + + A+       G  + A A A LA
Sbjct: 763 GESSSRTRGAALRVLAATRPPNE--RIALLQQAVGVLQASGGWYEMARALADLA 814


>gi|255070201|ref|XP_002507182.1| predicted protein [Micromonas sp. RCC299]
 gi|226522457|gb|ACO68440.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 6/127 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           + R GDL+  +   T      P       W   A +Q       W  A     + +    
Sbjct: 178 AGRHGDLDRVRSTWTWMRAQGPGRSAPTAWTYTAYIQAVGAFGRWEEAFDVYQEMRSEGV 237

Query: 220 -EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              +   + L+ A +  +        +    + +  +  + +  +     +     +   
Sbjct: 238 MPTSHTYSALIRAGAKGSRAGATAAVALVAKMRADGIKPD-VPITSALICAYGVLGQYSN 296

Query: 279 AEVILEK 285
           AE +L  
Sbjct: 297 AERMLRA 303


>gi|187477043|ref|YP_785067.1| hypothetical protein BAV0534 [Bordetella avium 197N]
 gi|115421629|emb|CAJ48139.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 606

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 89/281 (31%), Gaps = 48/281 (17%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++   RK  +              ++L  +IA  + +Y+ A  +LE  +  P+ R  A  
Sbjct: 334 DVQDQRKQATVAGASDAGAAAADAHVLLARIAEDQGRYDEAIAELER-VDDPSMRYAAH- 391

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
               ++                                          A+  ++      
Sbjct: 392 --MRQA-------------------------------ALRARQGRIEDALALVDAA---G 415

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
              +  + + ++ ++    D G +  +     ++ K   +++      A     Q K  +
Sbjct: 416 ALDDEEQTLGVLTKAQILRDAGQVDKAAALLAKADKDLPDTVEIKYELAMLSERQGKVAQ 475

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRL------EEINKESVESLVIV 331
            E +L ++  ++  PE A+ Y + L      + +R    L       E++      L  +
Sbjct: 476 LEKLLRQVIALD--PEHAHAY-NALGYTLADRNQRLPEALDLITQALELSPNDPFILDSM 532

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
             +   MG +  A      A  + P  +I   LA++  A  
Sbjct: 533 GWVKFRMGDLPAAAEYLQRAYALRPEPDIAAHLAEVLYAQG 573


>gi|87306793|ref|ZP_01088939.1| hypothetical protein DSM3645_00030 [Blastopirellula marina DSM
           3645]
 gi|87290166|gb|EAQ82054.1| hypothetical protein DSM3645_00030 [Blastopirellula marina DSM
           3645]
          Length = 435

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 6/149 (4%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDL 170
                 +   ++ +         +Y  A   +E  L I  T     Y+ +    R  G L
Sbjct: 62  ALGLSPDSAYIHQIHALYLSERGRYPEAEIAIERTLSIDPT-FAPYYAQHSRILRLQGKL 120

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            SA   A + L ISP+        +   +   ++  A   +    + A E     AI   
Sbjct: 121 QSAVTAAERGLAISPEEVRCIIQKMLSQIAMSDFPTAHDTVRMALQLAPE----NAIAHA 176

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNS 259
                   + +  A+  +  E+L+L  + 
Sbjct: 177 GHGYSLLQRREYAAAATEFREALRLDPHL 205


>gi|312880636|ref|ZP_07740436.1| Tetratricopeptide TPR_2 repeat protein [Aminomonas paucivorans DSM
           12260]
 gi|310783927|gb|EFQ24325.1| Tetratricopeptide TPR_2 repeat protein [Aminomonas paucivorans DSM
           12260]
          Length = 429

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 66/228 (28%), Gaps = 13/228 (5%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +++ A    +  L         +  L +          A     KA  + P+ P     
Sbjct: 196 GRFDEAEGAFQAGLDRGQEPFPLLLGLGYARMGQKRFPEAAEAFRKARALRPEDPEAAAK 255

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +      A     A+      ++ A E     ++    ++L     G    +     E++
Sbjct: 256 LGYAAGAAGLHQEALEAFLTVRRVAPEQCPWTSLGYAFQAL-----GRYPEAAEAFEEAV 310

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-----NTV 308
           +   +          + +SQ K  +A    +++  + P  E        L E        
Sbjct: 311 RKSPDDPEPLKGLGYTRLSQGKTGEALTAFQRLLTLRPDGESYAALGRALGERKVPGEAA 370

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +R L L   N    E    +++      +   A     + + + P
Sbjct: 371 EAFRRGLALAPGNPNLAEG---LARALAASRNPKAAREALRILLGLDP 415


>gi|310822426|ref|YP_003954784.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395498|gb|ADO72957.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 870

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 95/337 (28%), Gaps = 27/337 (8%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH---NEYLVYLLEVQIA 130
             L K     G + +   L+ +AA             + +       +    YL     A
Sbjct: 537 RALLKNRQRYGEREISEALVHLAAAERMAGNTEAGVKAAEEALGATKDLPAAYLQLFLAA 596

Query: 131 LAERQYNIAHEK---LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           L       A       +   +  A  +  +      + R      A      AL +    
Sbjct: 597 LGRGDATKAASSLAGFQGKTEDAALEKV-LEGRLRLTERK--PAEALELFQDALKLDSRR 653

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
                        A     A     Q  ++       R +  +         G+ +    
Sbjct: 654 EDALLLAGIAAASAGRRDDAFRSFFQALQSDPMRPMPRPVTTLY----FLRPGETLVGMK 709

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----L 303
            AI  +K     +  S+     L+   ++ +AE +  +++ ++P+   A  Y  L     
Sbjct: 710 GAILEMKKESMDVAPSLYEGLLLVHMGERPEAERLFREVYDLDPNNAGAAAYLSLLALHR 769

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
            E    +   A     + ++   +         E    + A      A+ +AP     LL
Sbjct: 770 GEGPRARTLGAQA-VAVGRQQPIAHFANGLALQENKKWEPAKRSLRDALGLAP----ALL 824

Query: 364 LAQIEQAN---SHNTDKILYWTQSALHAMPDPLWISD 397
            A+++ A    + N             A  DP +++ 
Sbjct: 825 SAEVKLAEMEMTSNRTSARERLLK--VAGLDPTYLAA 859


>gi|295688790|ref|YP_003592483.1| tetratricopeptide repeat-containing protein [Caulobacter segnis
           ATCC 21756]
 gi|295430693|gb|ADG09865.1| Tetratricopeptide TPR_4 [Caulobacter segnis ATCC 21756]
          Length = 957

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 107/332 (32%), Gaps = 37/332 (11%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP- 150
           ++   ++  A +  +    Q      ++  + L++ +I  A+ +   A +  + + + P 
Sbjct: 536 ALGVGDLTGALQYVAKALDQPKLPVRDQLAIRLVQARIFEAKGEKVRAKKMFQAIARAPY 595

Query: 151 --ATREFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEW 204
              T    +++  L +E   I    +A            D     V  A+ + Y+    +
Sbjct: 596 DNLTAPALLHATRLQYEKREINAAKAADTLNQLRYRWRGDGVEMDVIRALGKLYIDQGRY 655

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A+  +    + + +     A+     S   A   D +A     I+++ L  +    + 
Sbjct: 656 REALEVMRSAGRPSSDRPEALALQSEISSTFRALFLDGLADGMQPIQAVGLFYDFQELTP 715

Query: 265 CAAKS-LISQNKKRK---------AEVILE--------KIWKVNPHPEIANIYT-HLLSE 305
             A    + +N  R+         A  +L+         + K     ++A IY  +   E
Sbjct: 716 IGADGDQMVRNLVRRLVDVDLLDDAAKLLKYQVDNRLNGVPKAQVATDLAWIYLMNKRPE 775

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA---------MKIAP 356
           + +  +            + E  +  ++  + +G  D A                  IA 
Sbjct: 776 DALNTINATRTTILPPALNAERRLATARALIGLGRYDDAEELVERDNTKDGQEIRADIAW 835

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           ++  + L   + +    +  K       A  A
Sbjct: 836 KQRAWPLAGGLYERMLGDRWKGQGALSRAEEA 867


>gi|254415729|ref|ZP_05029487.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196177435|gb|EDX72441.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 881

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 97/287 (33%), Gaps = 49/287 (17%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE--------FAVYSLYFESCRIGDL 170
           E  V L   +    +  Y+ A    E  L     R          ++ +L     R G  
Sbjct: 487 EPFVGL--GRFYEGQGDYHQAVPWYEQCLSTTQNRLGEDHTDVAASLNNLAGLYYRQGRY 544

Query: 171 NSAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNA 218
             A+    +AL+I         P+       +   Y     + +A    I  L  +K+  
Sbjct: 545 EQAEPLYLQALEIQRRWLEQDHPNIANTLSNLALLYKYQGRYEQAELLYIQALELRKRRL 604

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS------IMASIC--AAKSL 270
            E + + A+ L   +     +G    +    +++L+L          ++A+      +  
Sbjct: 605 GEEHLDVALSLNTLAALYHAQGRYEQAEPLYLKALELRKRLLGQDHIVVATTLNNLGELY 664

Query: 271 ISQNKKRKAEVI------LEKIWKVNPHPE-------IANIYTHLLSENTVGKL------ 311
            +Q    +AE +      L K      HP+       +A +Y           L      
Sbjct: 665 RTQGCYDQAERLNLQALELRKRQLGEEHPDVAQSLNNLALLYYVQKRYEQAEPLYVQALE 724

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           +R  RL E + +  +SL  ++++    G  +QA    + A ++  R+
Sbjct: 725 RRKRRLVEEHPDVAQSLNNLAQLYTAQGRYEQAELLYIQAFELRKRR 771


>gi|126665165|ref|ZP_01736148.1| TPR repeat protein [Marinobacter sp. ELB17]
 gi|126630535|gb|EBA01150.1| TPR repeat protein [Marinobacter sp. ELB17]
          Length = 621

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 85/231 (36%), Gaps = 13/231 (5%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           +IA +    NI  E +++ L++      A  S   ++ +  DL  A  +  + +++  DA
Sbjct: 127 RIAQSLNSDNIQQELVKLWLEVEPDSIEAHRSAAIQAVKSNDLALALVHMERIMELGGDA 186

Query: 188 PWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
            + + A +   + A+   + ++    L +++ N  E   + A+L     ++  D      
Sbjct: 187 DFDSLAAMAASLSAERQQQLLSLYLDLAERQNNNPELEYSIALL-----MKIRDMPQPAL 241

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH-- 301
           +    +  L        A I     L   ++KR A   L    +  P + ++  +Y    
Sbjct: 242 ARLQTL--LGKHPTFQPAIILKGDLLYGSDQKRAALDHLMTNTRRFPGNRKMGALYGRML 299

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           +             RL     +  E  +  + +A+E    D A  +    +
Sbjct: 300 VNEGELQAAQDEFERLVTRYPDMSEFRLSHALVAIENQQGDIARKELSFLL 350



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 1/108 (0%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A    + ++    + +   A+  +   L       +  +      +L+L   +       
Sbjct: 476 AEAVQDLEQIVRDDADNAVALNALGYILTI-RTERLFEARQLIGRALELEPENPAILDSM 534

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              L  + K ++A   L + W   P PE+A  Y  +L      +  R 
Sbjct: 535 GWLLYREGKLQQALDYLSRAWAAFPDPEVAAHYGEVLWMTGADEQARI 582


>gi|167035671|ref|YP_001670902.1| hypothetical protein PputGB1_4680 [Pseudomonas putida GB-1]
 gi|166862159|gb|ABZ00567.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 267

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 4/106 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
               +S         L  L   +       +N A   LE   +I       +Y L     
Sbjct: 151 AAGGLSADEQLDGPVLALLTTAKTQQGSGDFNGAASSLERAQRIAPREPQVLYRLAQVRL 210

Query: 166 RIGDLNSAQRYATKALDIS---PDA-PWVTEAVVQQYVLAKEWSRA 207
             GD   A++ A +AL  +   P     +   + Q      + + A
Sbjct: 211 SQGDAAQAEQLARRALTYANGRPSLQAELWNTIAQAREKQGDSAGA 256


>gi|17231099|ref|NP_487647.1| hypothetical protein alr3607 [Nostoc sp. PCC 7120]
 gi|17132740|dbj|BAB75306.1| alr3607 [Nostoc sp. PCC 7120]
          Length = 232

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 3/147 (2%)

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
           K    ++Q      E    + +     ++     A E L   L+  +   F  + L    
Sbjct: 58  KQVQKLAQFADPQQERSQMIQQANALFSQGDLPGAEENLCKFLKKYSDDAFGHFQLGNVF 117

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R   + +A     +A+ +         A+   Y     WS AI    +  +   ++   
Sbjct: 118 FRGKKVEAAISAYQEAIRLRSRYAVAYNALGIVYASQSRWSEAIVQYQKALEINPDYG-- 175

Query: 225 RAILLIARSLENADKGDMIAS-YHDAI 250
            A+  +A +L   +K D   +    A+
Sbjct: 176 DALTNVALALWQTNKKDEALASLEKAL 202


>gi|323528386|ref|YP_004230538.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385388|gb|ADX57478.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 720

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 90/318 (28%), Gaps = 43/318 (13%)

Query: 73  FHMLHKRNYDKGYKALYTGLMSIAAHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
            H         GY  +Y    ++      L A K            +    + L      
Sbjct: 79  RHWRRCLRIMPGYAEVYESFGALLKMRGRLSAAKAIYRQLIALQPDHADAHHQLGA-ALY 137

Query: 132 AERQYNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A+ ++  A       +   P   E    + +   + R   L+ A+    + L + P    
Sbjct: 138 AQGRHEEAEASYRRAVTLRPEHAEAHYNHGVVLHALRR--LHEAEAAYRETLRLLPAHAE 195

Query: 190 VTE----AVVQQ-------------YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
                   ++                 +  ++  A+  L    K A+          +A 
Sbjct: 196 AHNNLGNVLMDLGRVADADAAYRDALTIRPQYPEALNNLAGALKAAQRLTEAELACRLAL 255

Query: 233 SL-------------ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++                D   +  +     +++ L  +   A       L  + +  +A
Sbjct: 256 TMRPDYAEAHVNLGAALTDLARLPEAEAAYRKAIALRADYAEAHYNLGVVLFKRERLEEA 315

Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
                +  ++   P+IA  Y +L     L +     ++   +   +  +  E+   V   
Sbjct: 316 AGAYREAVRLR--PDIAPAYNNLGCVLRLVDRLPEAVEAFQQARSLQPDLAEAHYNVGAA 373

Query: 335 ALEMGSIDQAHAKAMLAM 352
             ++G   +A +    A+
Sbjct: 374 FAQLGHWPEAESAYRRAL 391


>gi|167524369|ref|XP_001746520.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774790|gb|EDQ88416.1| predicted protein [Monosiga brevicollis MX1]
          Length = 612

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 79/258 (30%), Gaps = 45/258 (17%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA--------TKALDISPDAP 188
           + A ++ +  LQ           LY       +   AQ Y          K         
Sbjct: 149 DEAMKQYKKSLQ-----------LYINLLGDDEPEKAQCYCYLAQICIHEKMFATGLALY 197

Query: 189 WVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               A+++    +   +  A+          +  + +RA+ L+  ++         A   
Sbjct: 198 EKGLALLEGQANIEASYDIAVAQAGMGSACLQLGDASRAVNLLQTAINGLSPSPPSA--- 254

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
                       ++A  C  ++L  Q +  +A  +L +  +     ++ +     + E+ 
Sbjct: 255 ----------EFVVAQHCLGRALAEQGEPVRASKVLREAMETA---DLVD-----MPESE 296

Query: 308 VGKLKRALRLEEINKESVESLVIVS----KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              L+ AL          +SL   +    +  L +   +       LA     R  +   
Sbjct: 297 RSSLRAALHFHLAQALHQQSLPTQALDHVEACLAIELCNLGEQHVDLAPTYHLRALVQQA 356

Query: 364 LAQIEQANSHNTDKILYW 381
           L +++ A +  T +   W
Sbjct: 357 LGELDSALASFTQEAAIW 374


>gi|162452076|ref|YP_001614443.1| putative ATP/GTP-binding protein [Sorangium cellulosum 'So ce 56']
 gi|161162658|emb|CAN93963.1| putative ATP/GTP-binding protein [Sorangium cellulosum 'So ce 56']
          Length = 956

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 71/248 (28%), Gaps = 35/248 (14%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDI- 183
               A A+     A    E +      +  A + SL      +GDL  A+ +  +AL I 
Sbjct: 571 RAAFAEAKGYLERALALHEAVFGHDDPKVAAVLRSLGSVLHDLGDLGGARAHLERALAID 630

Query: 184 ----SPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKK---------NAKEWNRNRAI 227
                PD P V   V       +   +   A   L +            +     R   +
Sbjct: 631 IASFGPDHPDVARDVNDLGSVLMDQGDLPGARKHLERALAIDEATYGPDDPSVAIRLNNL 690

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILE 284
             + R L +     +      AI+      +    +I      + L      + A    E
Sbjct: 691 GALFRDLGDFAGARVHLERALAIDIRAYGPDHPTVAIGRTNLGRLLHDLGDLKGARDQFE 750

Query: 285 KIWKVNP------HPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALE 337
           +  K++       HP  A         N  G++ R    L     +  E  + + +    
Sbjct: 751 EALKIDEHSYGLYHPRFALAL------NNRGRVLRDLGDLAGARAD-FERALAIVEDTYG 803

Query: 338 MGSIDQAH 345
               D A 
Sbjct: 804 PDHPDVAR 811



 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 45/233 (19%)

Query: 165 CRIGDLNSAQRYATKALDI-----SPDAPWVTEAV--VQQYVLA-KEWSRAITFLNQKKK 216
              GDL  A+++  +AL I      PD P V   +  +        +++ A   L +   
Sbjct: 653 MDQGDLPGARKHLERALAIDEATYGPDDPSVAIRLNNLGALFRDLGDFAGARVHLERALA 712

Query: 217 NAKEW----NRNRAILLIARSLENADKGDMIASYHDAIESLKLC--------DNSIMASI 264
                    +   AI          D GD+  +     E+LK+             +A  
Sbjct: 713 IDIRAYGPDHPTVAIGRTNLGRLLHDLGDLKGARDQFEEALKIDEHSYGLYHPRFALALN 772

Query: 265 CAAKSLISQNKKR-------KAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVG 309
              + L              +A  I+E  +  + HP++A    +L S        E    
Sbjct: 773 NRGRVLRDLGDLAGARADFERALAIVEDTYGPD-HPDVARDINNLGSVLRDLGDLEGARA 831

Query: 310 KLKRALRLEE--INKESVESLVIVSKIAL-----EMGSIDQAHAKAMLAMKIA 355
              R L++ E     +     V +    L      +G +  A  +   A+ IA
Sbjct: 832 NFARVLKIAEATYGPDHP--AVAIGCNNLGSVLQALGELPGAREQLERALGIA 882


>gi|157148732|ref|YP_001456050.1| lipoprotein NlpI [Citrobacter koseri ATCC BAA-895]
 gi|157085937|gb|ABV15615.1| hypothetical protein CKO_04561 [Citrobacter koseri ATCC BAA-895]
          Length = 294

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 19/218 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIM 261
           +  A    +   +    +N       + R +     G    +  D +   +   N     
Sbjct: 112 FDAAYEAFDSVLELDPTYN----YAYLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 167

Query: 262 ASICAAKSLISQNKKRKA-----EVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKR-A 314
             +  A+  + + + ++A     E   ++ W  N    I   Y   +SE T+  +LK  A
Sbjct: 168 LWLYLAEQKLDEKQAKEALKQRFEKSDKEQWGWN----IVEFYLGNISEATLMERLKADA 223

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                + +   E+   + K  L +G +D A A   LA+
Sbjct: 224 TDNTSLAEHLSETNFYLGKYYLSLGDLDNATALFKLAV 261


>gi|152982872|ref|YP_001355001.1| hypothetical protein mma_3311 [Janthinobacterium sp. Marseille]
 gi|151282949|gb|ABR91359.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 280

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 5/141 (3%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           Q ++ +   V  L      A  Q + A ++ + +L        A + L     + G+   
Sbjct: 82  QKSYGSTPEVQRLYADALRATGQDDAAEKQYKALLGGSE-AAAAWHGLGLLEAQRGNPVR 140

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     ++  ++P  P V   +    +   + + A   L Q        NR    ++   
Sbjct: 141 AIANLRESSRLNPTNPIVLSDLSYALLNDGDNNAARVPLMQAV-ELAPGNRK---VISNL 196

Query: 233 SLENADKGDMIASYHDAIESL 253
           +L     GD   +     E+ 
Sbjct: 197 ALFFLLSGDRPKAESLMKEAN 217


>gi|94263820|ref|ZP_01287625.1| TPR repeat [delta proteobacterium MLMS-1]
 gi|93455741|gb|EAT05912.1| TPR repeat [delta proteobacterium MLMS-1]
          Length = 315

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 6/106 (5%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +    + + PW +  V      A +WS AI       +   +      +  +       
Sbjct: 183 ERLPATARERPWTSAVV--GLERAGQWSAAIRAYEAAIERWPDS----VVAWMGLGNGRY 236

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              D   +     ++L    +   A    A+SL +  +  +A  ++
Sbjct: 237 ALEDYGGAQQAFKQALARKPDFAPAVNNLARSLAAAGRYEEALAVI 282



 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 28/83 (33%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
               Q++ A    E  ++       A   L      + D   AQ+   +AL   PD    
Sbjct: 202 ERAGQWSAAIRAYEAAIERWPDSVVAWMGLGNGRYALEDYGGAQQAFKQALARKPDFAPA 261

Query: 191 TEAVVQQYVLAKEWSRAITFLNQ 213
              + +    A  +  A+  +++
Sbjct: 262 VNNLARSLAAAGRYEEALAVIDR 284


>gi|326435457|gb|EGD81027.1| hypothetical protein PTSG_10970 [Salpingoeca sp. ATCC 50818]
          Length = 494

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 14/146 (9%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           +         L  R +    +G +  +     E L+L   +  A++  A+ L    K R 
Sbjct: 81  QRSQSQCDYALYVRGMILKAQGQLKEAQTAFQEVLRLRPTNHHAALQIARCLYLSGKFRA 140

Query: 279 AEVILEKI-------WKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVI 330
           A  + ++        W+V  H + +  +  L   +     L RAL +      +  SL  
Sbjct: 141 ALDVFDQAAEIGVSSWRV--HHDKSMCHVRLKQYDQAEQLLGRALAIY----NNALSLQQ 194

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++++ +    +  A      A+KI+P
Sbjct: 195 LARVRILTSDLPGAAKAYEEALKISP 220


>gi|323448694|gb|EGB04589.1| hypothetical protein AURANDRAFT_38946 [Aureococcus anophagefferens]
          Length = 959

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 64/204 (31%), Gaps = 15/204 (7%)

Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               + +A+     AL   P   A W+    +++             L    + A +   
Sbjct: 564 SRSAVETARAVYAHALATFPNKKAIWLRACALEKK------HGTRELLEATLRKAVQHCP 617

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +L +  + E    GD+  +    +++     +S    + A K     +++ +A V+L
Sbjct: 618 QAEVLWLMAAKEKWLGGDVEGARQTLMDAFATNPDSEQVWLAAVKLEWENDERDRARVLL 677

Query: 284 EKIWKVNPHPEIANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVI--VSKIALE 337
            +     P P +      L  E    +   +L     L++    +   L+     +  L 
Sbjct: 678 ARARDRAPSPRVWMKAALLERECHDYDAELRL-LDEALDKYATFAKFYLMAGQACERDLS 736

Query: 338 MGSIDQAHAKAMLAMKIAPRKEIF 361
                 A       ++  P+    
Sbjct: 737 KQEEKAARDFYARGLRRCPKSSAL 760


>gi|303245935|ref|ZP_07332217.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
 gi|302492718|gb|EFL52586.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
          Length = 1005

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHL--LSENTVGKLKRALRLE 318
           A++ + +        R A +  E+ +   P  P +          S      L    RL 
Sbjct: 122 AALGSVRLYS--GDVRGAALAYERAYAAKPSLPGLGLKLAQTLNWSGRAKDALPLLERLH 179

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
                ++E ++++ +     G  +QA    +  +K  P     LL A 
Sbjct: 180 AAEPVNLEIVILLGRALNAAGKPEQAAELVIPLLKTHPDNVELLLAAA 227


>gi|264676861|ref|YP_003276767.1| hypothetical protein CtCNB1_0725 [Comamonas testosteroni CNB-2]
 gi|262207373|gb|ACY31471.1| hypothetical protein CtCNB1_0725 [Comamonas testosteroni CNB-2]
          Length = 892

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 7/127 (5%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAK 219
            ++   GD+  A RYA  ++  +PDA       +   +   + ++A     Q    ++  
Sbjct: 250 LQAREQGDMAKALRYAETSVRTAPDALAPRLQWLGLLLQDGQAAQAQRVAEQGLALQHDP 309

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRK 278
                + + L  +    A +     ++  A+ +  L         + A  + ++  +  +
Sbjct: 310 ALQVLQGVALHVQGRGMASE----QAFDAALAAPHLSRSERQNYGVIALDAALAAGQTER 365

Query: 279 AEVILEK 285
           A+ +++ 
Sbjct: 366 AQRLVQA 372



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 36/97 (37%), Gaps = 5/97 (5%)

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ E   +GD   +  +  ++ +L  ++   ++  A +     +  +AE +L+   ++  
Sbjct: 21  KAYEAMARGDGQRAISELQQAQRLAPDNTEIALQLAAAHRRFGQPAQAEAVLKA--QLQR 78

Query: 292 HP---EIANIYTHLLSENTVGKLKRALRLEEINKESV 325
           HP    +A     +       +   +  L     +  
Sbjct: 79  HPGDARLAQALRDMHQGAVPARQPESQALPAPAAKEP 115


>gi|209515957|ref|ZP_03264818.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
 gi|209503615|gb|EEA03610.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
          Length = 287

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 58/193 (30%), Gaps = 12/193 (6%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++ A ++ LA  ++      +    E  + L            + A    ++  Q PA +
Sbjct: 54  ALRAGDVELASTLYEKALAANPNSTEAQLGL--GDTMYLAGDLDRARALYQLAAQQPAAK 111

Query: 154 EFAVYSLYFESCRIG--DLNSAQRYATKALD-ISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             A   L   + R    D  +AQ  A  A     P        V+       +   A   
Sbjct: 112 PAAQLGLARVALRQRRLDDAAAQYRALLAAQPDDPVLSEGLGTVLDLQGRHAD---AQAI 168

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                    E    R  L ++  LEN        + +  ++   L D  + A    A + 
Sbjct: 169 YRSALAAHPEVQGLRVNLGLSLILEN----KPRQAANTLLDVAGLPDAPLQARQNLALAY 224

Query: 271 ISQNKKRKAEVIL 283
                   A+ IL
Sbjct: 225 GLLGNTEAAKKIL 237


>gi|158335881|ref|YP_001517055.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158306122|gb|ABW27739.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 1685

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 87/310 (28%), Gaps = 45/310 (14%)

Query: 94  SIAAHNIPLA----RKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLEMML 147
           ++  H+   A    ++++                 L+ Q   A  +  +  A   +E ML
Sbjct: 470 ALTHHDRATAGDWSQRLNGAAPHHRLA--------LQAQFELAYYDADHTSALAVIEQML 521

Query: 148 QIPATREFAVYSLYFESCR-------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           +    +  A   L  +  +         D      Y  +     P   W   A +     
Sbjct: 522 E----QFPAAPHLMLQKLQYLQELASRQDCVDWLTYVIEQEQFHP-IFWTRLAKLLSDDA 576

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   AI  L +  +         A      +     +     +      +  L D   
Sbjct: 577 RAD-ESAIRLLRRSIRAMPT----EAYNYFLLANLYWSQRQFDVALDLYRFAACLEDKEQ 631

Query: 261 MAS---ICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKL 311
             +     AA+      +   A  +L++ W         P   +A  Y HL  +     +
Sbjct: 632 TYAHNYFLAARGCR---QTSVALQLLKQRWSRDQKRSARPVYALATAYDHL--DRPSEAI 686

Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
           +   + +  +    E L+  +K   E G  DQAHA    A             A + Q  
Sbjct: 687 EVLAQTQSWHPGDGELLLYRAKYLGEHGQFDQAHALLKEAKAKTAHSRWLSTAATLAQYE 746

Query: 372 SHNTDKILYW 381
                 +  W
Sbjct: 747 YKPDQALDLW 756



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 65/177 (36%), Gaps = 23/177 (12%)

Query: 164  SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWN 222
              + GD   A+    KA ++ P+  +   ++    +   E   A   L + K++   E+ 
Sbjct: 1286 KQKTGDRLGAKADFRKAFELDPEYSFAGLSLFDLELEGLETEAAANTLARLKEHCNDEFV 1345

Query: 223  RNRAILLIARSLENADKGDMIASY-------HDAIESLKLCDNSIMASICAAKSLISQNK 275
              RA+ L  R  +       +A            +E+             A +S+I+ N 
Sbjct: 1346 LARAVQLAVRQNDLNTATQTLAQLCIYPSDQEWPLEA-------------AVESMIAANW 1392

Query: 276  KRKAEVILEKIW-KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
              +A+ IL   + + + HP++   + +   E    +     +L++ + +       +
Sbjct: 1393 TTEAQTILFDAFPQPDAHPKVGYHWVYCC-EKLKQRKFCQKQLQKFHPDHPVQRQAL 1448


>gi|149920015|ref|ZP_01908489.1| hypothetical protein PPSIR1_14960 [Plesiocystis pacifica SIR-1]
 gi|149819112|gb|EDM78548.1| hypothetical protein PPSIR1_14960 [Plesiocystis pacifica SIR-1]
          Length = 686

 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 40/312 (12%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
              +   A K+  +   +       ++ LL     L E+    A E       +   +  
Sbjct: 351 GGGDTENALKVAQHA-AEQGNDGPPVLALLG--SLLIEKDDFDAAEPFLR-RAVEEGKIP 406

Query: 156 AVYSLYFESC----------RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205
           + Y                 +  D   A      A+ ++  A    E ++   +  ++  
Sbjct: 407 SAYGDLANVLWDRSDDDTDEQKEDREEAMTLLATAVGLNHVAKSAIEMLLDLAMEEEDDK 466

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                L   +K+A       ++       EN ++         A+    L D++      
Sbjct: 467 ATELLLGAGEKHATNAAVLTSLTTFYVEGENPEEARPWLEKLLALPRRSLDDDAFARRTM 526

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINK 322
            A   I + ++R    I                  ++ S +   + + A+ L      + 
Sbjct: 527 LA-LEIDEFEERYEVAI-----------------DNVNSGDPGKQNEAAVFLREVIAKDA 568

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYW 381
              +  ++++    E      A +  M A+++ P   +I  L+A I +      + + + 
Sbjct: 569 RYWQPHLMLALAVRESEGDAAALSHLMNAVRLRPNDGQIRQLIAAILRKQGRPREAVEH- 627

Query: 382 TQSALHA--MPD 391
              A+ A    D
Sbjct: 628 -LRAVVALNPRD 638


>gi|285018368|ref|YP_003376079.1| hypothetical protein XALc_1590 [Xanthomonas albilineans GPE PC73]
 gi|283473586|emb|CBA16089.1| putative tpr repeat protein [Xanthomonas albilineans]
          Length = 272

 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 2/159 (1%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
               + A       L + A    A   L   + R G    A  +  KA +++PD+     
Sbjct: 70  SGDLDGAERYANKALTLDANSVQAHTLLALIADRRGAYAVAGEHYRKAAELAPDSGETLN 129

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                       + ++++ ++            A  L          G      HD  ++
Sbjct: 130 NYGAWLCANGAAAESLSWFDRALALPDYAT--PASALANAGGCALQVGQRERGLHDLRKA 187

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           L +  N+  A    A+  ++Q    +A    E+     P
Sbjct: 188 LAMEPNNPYALEAMAREEVAQGHFFEARAFAERRLASAP 226



 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 38/225 (16%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L       GDL+ A+RYA KAL +  ++            L  +   A     +  + A
Sbjct: 62  GLAVNRLGSGDLDGAERYANKALTLDANSVQAHT----LLALIADRRGAYAVAGEHYRKA 117

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQNKK 276
            E   +    L          G    S      +L L D +  AS  A      +   ++
Sbjct: 118 AELAPDSGETLNNYGAWLCANGAAAESLSWFDRALALPDYATPASALANAGGCALQVGQR 177

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +    L K                                  +   +  +L  +++  +
Sbjct: 178 ERGLHDLRKA-------------------------------LAMEPNNPYALEAMAREEV 206

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
             G   +A A A   +  AP    +  L  +IEQ          Y
Sbjct: 207 AQGHFFEARAFAERRLASAPANSSVLQLAVKIEQRLGDKVAASRY 251


>gi|261328733|emb|CBH11711.1| cell division cycle protein 16 homolog, putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 599

 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 60/182 (32%), Gaps = 21/182 (11%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +AA +   A ++ + V++    + + +   ++                 E +   P+   
Sbjct: 101 LAARDYDQAFRIAADVAKDFEGNMQAVAIAMKS-AYEL-GDVRGCSAYAERLKDSPSMNV 158

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----KEW------ 204
            A+  L   +   GD   A      ALDI P       A++++ +L     ++       
Sbjct: 159 VALCYLGRCAELSGDTKRAVHNYCAALDIDPFCGEPMNALIERRLLGVNELRDTIESLRL 218

Query: 205 ---SRAITFLNQKKKNAKEWNRN------RAILLIARSLENADKGDMIASYHDAIESLKL 255
              + A+      +   +   +       R  LL+  +    ++ D+  +       LK+
Sbjct: 219 PPEAEALRASYYARLPGEFVPKEFDKYIPRTTLLLQAARTEYERNDLQQALSLTTSLLKI 278

Query: 256 CD 257
             
Sbjct: 279 SP 280


>gi|220925934|ref|YP_002501236.1| hypothetical protein Mnod_6109 [Methylobacterium nodulans ORS 2060]
 gi|219950541|gb|ACL60933.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 1567

 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 77/222 (34%), Gaps = 32/222 (14%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYAT---------KALD-ISPDAPW--VTEAVVQQYVLA 201
              +     E+ R G +  A + A          +AL  ++P  P   + EA+     + 
Sbjct: 679 LAGLAPHLPEAERAGAIAEALQAARAIQNEDARSRALAGLAPHLPEGLLPEALQAAKAIQ 738

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            E  RA     Q+  N  E  R    L    +L+ A + D + +   A  +  L +  + 
Sbjct: 739 DEDERAGVTWVQRPLNVPEGQREGQRLA---ALQWAIQDDELRAQALAELASHLPEGLLP 795

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE------IANIYTHLLSENTVGKLKRA 314
             + AA+++ +   + +A   L       PH PE      IA       +        R+
Sbjct: 796 EVLQAARAIQNGGPRARALAGL------APHLPEAERAGAIAEALQAARAIQNED--ARS 847

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             L  +     E   ++ +      +I  A  +A     +AP
Sbjct: 848 RALAGLAPHLPEG--LLPEALQAAKAIQDARERARALAGLAP 887



 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 43/272 (15%)

Query: 159  SLYFESCRIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  E+ +   +   A+  A     ++P  P    A      L   W  AI   N + + 
Sbjct: 928  GLLPEALQAARVIQDARERARALAGLAPHLPEAGRADAFAEALQAAW--AIQNENARSRA 985

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIE--SLKLCDNSIMASICAAKSLISQNK 275
              E   +    L+  +L+ A       +   A+   +  L +  +  ++ AA+++ ++N 
Sbjct: 986  LAELAPHLPEQLLPEALQAAKAIQDENARSRALAGLAPHLPEGLLPEALQAARAIQNENA 1045

Query: 276  KRKAEVILE----KIWKVNPHPEIANIYTHLLSENTVGKL-------------------- 311
            + +A   L     +  + +   E       +  E+    L                    
Sbjct: 1046 RSRALAGLAPHLPEAERTDAFAEALQAARAIRDEDAHAHLLVSLTPHLPEAERAGVIAAA 1105

Query: 312  -----------KRALRLEEINKESVESLV--IVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                        RA  L  +     E+      ++      +I     +A L   +AP  
Sbjct: 1106 LQAARAIQDESVRARALAGLAPHLPEAERAGAFAEALQTAWAIQDDRQRADLLAVLAPHL 1165

Query: 359  EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390
               LL   ++ A +    +       A  A  
Sbjct: 1166 SEGLLPEALQAARAIQDGRQRA-RALAGLAPH 1196


>gi|146342013|ref|YP_001207061.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp.
           ORS278]
 gi|146194819|emb|CAL78844.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
           TPR domain protein [Bradyrhizobium sp. ORS278]
          Length = 739

 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 94/289 (32%), Gaps = 43/289 (14%)

Query: 78  KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137
           K++  +    L   + +  A  +  A+ + S +      H + L +LL V +AL   Q +
Sbjct: 17  KQHRKQVDDLLPRAVAAYRAGTLAEAQAICSRILALLPHHFDTL-HLLGV-VALDGGQLD 74

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197
           +A + L   ++I      A+ +L            A++   +A+ + P+           
Sbjct: 75  LAEQALTRAVEIEPRHAEALSNLGLALFNRKRYEEARKCQERAVALKPNLL--------- 125

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
                                        + L          G    +      ++ L  
Sbjct: 126 -----------------------------VALTGLGNTLMRLGLPEEAIAAHDRAIALKP 156

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRA 314
           +   A      +L+   +  +A+   ++   +NP H E         +   ++   L   
Sbjct: 157 DFADAYCNRGMALLPLGRNVEADQSFDRALSLNPRHMEAMFGKGLASIALRHSNAALAAF 216

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                I   + + L    ++  + G  D A A    A+ I PR+++ L+
Sbjct: 217 DAALAIRPRAAQVLAQRGRLHQQAGRFDPAMADFQAALAIDPRQDVALM 265


>gi|27804844|gb|AAO22883.1| hypothetical protein [Myxococcus xanthus]
          Length = 310

 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 15/224 (6%)

Query: 177 ATKALDISPDAPWV-TEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +A    P    V  +A +++     L  E SRA+T      + +      R       
Sbjct: 31  AAEAFAGVPAEADVYADARLRRARSLSLLGEHSRALTLFRAAMQESPADVEVRM----QF 86

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +      G    +     E L    ++ +    AA     Q + R+A  +L       P 
Sbjct: 87  ARALERGGTPNRAELLLREGLSAGPSAALYDALAATLH-RQGRGREALTLLRGAVARFP- 144

Query: 293 PEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVS-KIALEMGSIDQAHAK 347
            +   +Y     H    +  G L R   +  ++ +   +L  +   +A    ++D+A  +
Sbjct: 145 RDEDLLYVLGAAHERQGDVTGALARMRAVLAVSPDHAAALNFLGYLLAQAGQNLDEAERR 204

Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
              A+++ P    +L           +  + +   + A    PD
Sbjct: 205 VRRALELRPDTGAYLDSLGWVYFRRGDYARAVDALERASTLAPD 248


>gi|32475742|ref|NP_868736.1| hypothetical protein RB9156 [Rhodopirellula baltica SH 1]
 gi|32446285|emb|CAD76113.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 1053

 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GDL  A++     L  SPD P     + Q +  + +   AI  L    ++      +
Sbjct: 121 IAEGDLRGAEKILHPYLIASPDDPIALFTLAQLHAASDDLETAIKTL----RHPAIQESD 176

Query: 225 RAILLIARSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            A+  +  + +     G    +     + L++  +++M     A  +I   + + A+  L
Sbjct: 177 AALPALGTTADWLVQLGRPEEAADCYRQMLRVAPDAVMIHRRLAGLMIRMGRPQLAQGSL 236

Query: 284 EKIWKVNP--HPEIANIYTHLLSEN--TVGKLKRALRLEEIN 321
            ++ +      PE+A + +    ++   +G + +A +L + +
Sbjct: 237 RQLCRSGDVRRPELAALISISQVDSSRPIGPIAKARQLAKQH 278


>gi|325923961|ref|ZP_08185550.1| hypothetical protein containing a divergent form of TPR repeats
           [Xanthomonas gardneri ATCC 19865]
 gi|325545544|gb|EGD16809.1| hypothetical protein containing a divergent form of TPR repeats
           [Xanthomonas gardneri ATCC 19865]
          Length = 251

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 65/245 (26%), Gaps = 55/245 (22%)

Query: 42  FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIP 101
             IL           +  AV     + P    ++   R                      
Sbjct: 29  IFILLAFSLLAVLVYVCVAVIPDLRNDPTARRNLRKVRQR-------------------I 69

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
             ++     S+Q    +         Q  L +  Y  A E  +           A+  +Y
Sbjct: 70  DPQREQRDASRQLDVADTPENRRRLAQTLLEQGDYARAAELYQG----------ALRGIY 119

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
                  D +     A              E                  L+        +
Sbjct: 120 -----QDDPDLMLGLA----KAQYGLGQAAET--------------RKTLDALIAANPNY 156

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +   LL AR++E  D G +  + H+     +       A +  A+ L+   ++++A+ 
Sbjct: 157 RSHDGHLLYARAVE--DSGSIEEALHEYETLAQGYPG-EEARVRYAQLLLRAARQQEAKA 213

Query: 282 ILEKI 286
           I E++
Sbjct: 214 IFEQV 218


>gi|307297134|ref|ZP_07576948.1| sulfotransferase [Sphingobium chlorophenolicum L-1]
 gi|306877438|gb|EFN08668.1| sulfotransferase [Sphingobium chlorophenolicum L-1]
          Length = 511

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 57/193 (29%), Gaps = 17/193 (8%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWN 222
           +   G    A++   +A+ ++P        +            AI  L++    + +   
Sbjct: 48  ARAGGKAEEAEQAFRRAIQLAPRHALAHADLCGLLSDLDRAGEAIALLDRAAASHNQPAQ 107

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                 L  ++     +     +       ++   ++ +  I  A++L +     +A   
Sbjct: 108 NPPVWTLSLKAATWMAERRPHDALPALEALVRQAPHAPVPWINLAEALQALGHLDRAVGA 167

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
                 ++P+                 ++ R             + V V K AL   + D
Sbjct: 168 YRHALAIDPY------CAPAWLGLANLRVIRLEP----------ADVAVIKTALGRATSD 211

Query: 343 QAHAKAMLAMKIA 355
            A  +   A+  A
Sbjct: 212 LARVQLGYALGKA 224


>gi|297568748|ref|YP_003690092.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924663|gb|ADH85473.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 228

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 42/158 (26%), Gaps = 5/158 (3%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A   H    +            L  +      Q   A      +             L  
Sbjct: 62  AALAHLDALEADLGEPPPRALYLRAEALRHSGQPEAAEVLYLDLTTS-CLAARGYRGLGR 120

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NA 218
            +   G       +  +A+ + P        +    +LA + + A+  L    +      
Sbjct: 121 LAMAAGRQEEGVSHLRRAVALQPTDARFRNDLGYALLLAGQPAEALPQLRTAVELGGGER 180

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
              N+  A+L++ R  E     D       A+E L+  
Sbjct: 181 ALVNQLLALLVLGRFGEAEMVADNAGLPRPALEQLRAA 218


>gi|182680104|ref|YP_001834250.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635987|gb|ACB96761.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 955

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 65/208 (31%), Gaps = 21/208 (10%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +  +    G  + A      AL + P                K    A+    +  K  
Sbjct: 297 GIALQGL--GKPHEALAAYDAALGLEPSYCEAWCNRGNILHELKRLPDALLSYREALKVR 354

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             +       L  R+    +      + H   E+LK   N   A   +   L   ++  +
Sbjct: 355 PHF----LPALTNRANVLLELNRFEEALHSCTEALKHDPNHARALGISGAILHKLSRFHE 410

Query: 279 AEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRA--------LRLEEINKESVESLV 329
           A   L+K   +NP  PE+A     L   N + +L R           L   N    E+L 
Sbjct: 411 ALEALDKAAALNPASPEVA-----LNRGNVLQELGRLPEAIAAYEKALALKNP-YPEALS 464

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +     E G  ++A A    A+ + P 
Sbjct: 465 GLGVALKEQGRFNEALACFDQALDLKPD 492



 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 40/151 (26%), Gaps = 7/151 (4%)

Query: 144 EMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           E +   P   R   +             + A     KA  ++P +P V            
Sbjct: 383 EALKHDPNHARALGISGAILHKLSR--FHEALEALDKAAALNPASPEVALNRGNVLQELG 440

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
               AI    +       +       L    +   ++G    +     ++L L  +   A
Sbjct: 441 RLPEAIAAYEKALALKNPYPE----ALSGLGVALKEQGRFNEALACFDQALDLKPDFADA 496

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
               A  L+   +  +     E  W  +  P
Sbjct: 497 RNNRAGLLLLYGRFEQGFADYESRWDRSNAP 527


>gi|167842404|ref|ZP_02469088.1| hypothetical protein Bpse38_37418 [Burkholderia thailandensis
           MSMB43]
          Length = 348

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 9/195 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L   + ALA     +A    E  L+       A   L     + G+L  A     +A 
Sbjct: 88  SDLTVAESALAAGNAELAATLFERALKADPRSLPAQVGLGDAMYQTGELARAGVLYVQAA 147

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
             +PD P     + +  +  +    A+      K NA       A   +   L+    G 
Sbjct: 148 TAAPDDPRAQLGLARVALRERHLDDALA--RYAKLNAAHPENIAAAAGLGTVLDLL--GR 203

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIA 296
              +      +L    ++   +     SL+  N+ R+   +L  +  ++  P     ++A
Sbjct: 204 HDDAQSVYRAALARHPDAHALTTDLGLSLVLANRAREGANVLLDVAGLSNAPAQAREDLA 263

Query: 297 NIYTHLLSENTVGKL 311
             Y  L +++   ++
Sbjct: 264 LAYGMLGNDDAAKRI 278



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 43/133 (32%), Gaps = 3/133 (2%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291
           +      G+   +      +LK    S+ A +    ++    +  +A V+  +     P 
Sbjct: 93  AESALAAGNAELAATLFERALKADPRSLPAQVGLGDAMYQTGELARAGVLYVQAATAAPD 152

Query: 292 --HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
               ++      L   +    L R  +L   + E++ +   +  +   +G  D A +   
Sbjct: 153 DPRAQLGLARVALRERHLDDALARYAKLNAAHPENIAAAAGLGTVLDLLGRHDDAQSVYR 212

Query: 350 LAMKIAPRKEIFL 362
            A+   P      
Sbjct: 213 AALARHPDAHALT 225


>gi|163793276|ref|ZP_02187251.1| hypothetical protein BAL199_02174 [alpha proteobacterium BAL199]
 gi|159181078|gb|EDP65593.1| hypothetical protein BAL199_02174 [alpha proteobacterium BAL199]
          Length = 616

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 25/174 (14%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +     +G    +      ++ L      A+I AA  L +      A  +  ++  + P 
Sbjct: 14  AAAALRRGASSEAVRRIRPAIVLDPGHADATILAAMGLRASGDALAAVRLFRRVLAMRP- 72

Query: 293 PEIANIYTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
               + Y                 + +    L RA      +         +   AL  G
Sbjct: 73  ---GDPYARGGLAELGPDSGQPSRAHDDQALLARARE----SPGQSLGWRALGLSALSAG 125

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP-DP 392
               A      A  ++P     L L  +  A      ++  W   A  A+  DP
Sbjct: 126 RRSVAWPALRRAALLSPGDRATLPLLIL--AERRGGARVN-WIAQADRALAVDP 176



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 1/188 (0%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +     A    + +++      + L +      AL+  + ++A   L     +       
Sbjct: 88  SGQPSRAHDDQALLARARESPGQSLGWRALGLSALSAGRRSVAWPALRRAALLSPGDRAT 147

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           +  L     R G   +    A +AL + P+     EA +  Y  A++ S A+  + ++  
Sbjct: 148 LPLLILAERRGGARVNWIAQADRALAVDPNGSATLEAALIAYREARD-SAAVLRVGKQLM 206

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
                        IA +       D   +   A  +  L   S   +   AK L    ++
Sbjct: 207 LGAPGASGAYQATIAVADVALRVRDPKTAGRLAARAEVLWPGSTAHAALRAKLLRDAGQR 266

Query: 277 RKAEVILE 284
           + A   L+
Sbjct: 267 KAAIGYLQ 274


>gi|163798118|ref|ZP_02192055.1| hypothetical protein BAL199_09405 [alpha proteobacterium BAL199]
 gi|159176609|gb|EDP61186.1| hypothetical protein BAL199_09405 [alpha proteobacterium BAL199]
          Length = 932

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 15/168 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           E Q          A    E  L        + + L F   ++GD   A  +   ++ +SP
Sbjct: 9   EAQARYRAGDLIAAKALFESALADDPQHWASRHDLGFLLRQLGDRAGADHHVRASIALSP 68

Query: 186 --DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
                W T  ++     A  + +A   +++ +  A              +  +    D  
Sbjct: 69  DRAVGWTTAGLLNG--DAGSFRQARRSIDRARLIAPAEPT------SLIARADLASDDEC 120

Query: 244 ASYHDAIESLKLCDNSIM---ASICAA--KSLISQNKKRKAEVILEKI 286
           A +   + +     +  +   A +  A  + L       +A   +   
Sbjct: 121 AGFAGELAATLRRPDLPVRLRARVLHALGRLLDRLGDAEQALASISAA 168


>gi|115376815|ref|ZP_01464039.1| Tgl protein [Stigmatella aurantiaca DW4/3-1]
 gi|115366177|gb|EAU65188.1| Tgl protein [Stigmatella aurantiaca DW4/3-1]
          Length = 193

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 2/92 (2%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A     KAL++ P+       +   Y+    +  AI    Q   +        A 
Sbjct: 23  GRHAEALAEYEKALELRPNFSEARSNLGNVYLDQGRYDEAIRTYEQVLNDMLYPTPFIAQ 82

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             +  +     KGD   +  +   ++ L  N 
Sbjct: 83  SNLGWA--YFKKGDTAKALENIKSAVTLNPNF 112


>gi|84515743|ref|ZP_01003104.1| TPR domain protein [Loktanella vestfoldensis SKA53]
 gi|84510185|gb|EAQ06641.1| TPR domain protein [Loktanella vestfoldensis SKA53]
          Length = 554

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 79/263 (30%), Gaps = 21/263 (7%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
           +  +      +   V L+   +     QY++A+     + +       A           
Sbjct: 268 ARAATALAPEDTPAV-LMTAGLLEDLGQYDLANAAYTGVARDDPAFASAELGRADVLRAA 326

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G  ++A           PD P V  A       A     A            +    + +
Sbjct: 327 GKRDAALEVLEALARAYPDMPRVFAAKGNLLREAGRPEDAKAAYTGALSLYDDSAPAKWV 386

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKI 286
           +  AR + N        +  D   +L L   +         SL+ +  K  +A  ++E+ 
Sbjct: 387 VFYARGIANHQLDLWPEAEADFRAALALQPGNPQVLNYLGYSLVERGEKLDEALAMIERA 446

Query: 287 WKVNPHPEIAN--------IYTHLLSENTVGKLKRALRLEEINK---ESVESLVIVSKIA 335
             V   P+           ++     ++ V  L+RA  LE ++    +       +    
Sbjct: 447 --VAAMPDNGAIVDSLGWVLFRLGQYDDAVEILERATTLEAVDPVINDH------LGDAY 498

Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358
             +G   +A  +   A+   P +
Sbjct: 499 WAVGRSIEARFQWQRALSFNPTE 521



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 100/343 (29%), Gaps = 50/343 (14%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L  G   +   NI  A      V +        + +  +     +   ++ A        
Sbjct: 121 LTQGWAHLGNGNIRRALAQFDQVIETDNMTTYGVTH--KAYALASVGDFDGAEALFSARS 178

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP---------------------- 185
            +  +R+ A+  +   S  +G    A           P                      
Sbjct: 179 DMQYSRKSAIAHIEILSQ-LGRNPQALALLDDIFGRQPDAAVAALRAALVSGQAVPFAAV 237

Query: 186 -----DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                    V   V     +  +     T L  +   A       A+L+ A  LE  D G
Sbjct: 238 PTPQAGLAEVYITVAGL--IQTDTPDTFTLLFARAATALAPEDTPAVLMTAGLLE--DLG 293

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               +        +       A +  A  L +  K+  A  +LE       +P++  ++ 
Sbjct: 294 QYDLANAAYTGVARDDPAFASAELGRADVLRAAGKRDAALEVLEA--LARAYPDMPRVFA 351

Query: 301 --------HLLSENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                       E+       AL L       K  V     ++   L++    +A  +A 
Sbjct: 352 AKGNLLREAGRPEDAKAAYTGALSLYDDSAPAKWVVFYARGIANHQLDLWPEAEADFRAA 411

Query: 350 LAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
           LA++   P+   +L  + +E+    +    +   + A+ AMPD
Sbjct: 412 LALQPGNPQVLNYLGYSLVERGEKLDEALAM--IERAVAAMPD 452


>gi|148255092|ref|YP_001239677.1| hypothetical protein BBta_3691 [Bradyrhizobium sp. BTAi1]
 gi|146407265|gb|ABQ35771.1| hypothetical protein BBta_3691 [Bradyrhizobium sp. BTAi1]
          Length = 720

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 21/85 (24%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----- 152
            +  LA +++ +         E LV LL  +        + A   L  M+  P T     
Sbjct: 264 GDTGLAERLYRFGRSADC--RERLVRLLYAK-----GDKDAAEALLRDMIDDPETDDEHL 316

Query: 153 --------REFAVY-SLYFESCRIG 168
                   +       L  E  R G
Sbjct: 317 FATDFYARKFGGRRTGLCTELLRSG 341


>gi|322783277|gb|EFZ10861.1| hypothetical protein SINV_10613 [Solenopsis invicta]
          Length = 2065

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 69/219 (31%), Gaps = 26/219 (11%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
           +H+R  +   +A    L + A   + +A +    + +   FH + L              
Sbjct: 695 MHQRQLNLARQAADRCLEAAAYGALGIAHRATKNLDKALGFHTQELTL------RQEAGD 748

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEA 193
                     +  +           Y  + +     L  A+  A   ++       +  A
Sbjct: 749 LRGECRAHGNLGAV-HMAL----GQYTHAVKCYQEQLERAKELADSGVEAQ-ALGNLGIA 802

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +        +  AI +  Q+    +      A+L  AR+L N   GD   +  D  E++
Sbjct: 803 RLNM----THYEDAIGYFEQQLATLEPLTTGTALLDKARALGNL--GDCYEALGDLEEAI 856

Query: 254 K-LCDNSIMASICAA-----KSLISQNKKRKAEVILEKI 286
           K        A+   +     ++     + R+A   L++ 
Sbjct: 857 KCHEQQLTAATKLKSIRDQERAYRGLGRAREATGNLQEA 895


>gi|319900977|ref|YP_004160705.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319416008|gb|ADV43119.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 477

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 8/128 (6%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N+    L+ A S    D G    +      + K  + +   S+      + +    KA  
Sbjct: 57  NKKNVELITAVSRAYLDTGKPAEAETYLEMARKADNKAPEVSVLEGDIALYRKDVGKACQ 116

Query: 282 ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           + E+    +P     + + A  Y        + KL    +L+    +  E+   ++++  
Sbjct: 117 LYEQAIYFDPNCKEAYLKYAQAYKLASPSQAIDKL---QQLKTFAPDYPEADKALAEVYY 173

Query: 337 EMGSIDQA 344
                 +A
Sbjct: 174 ANNRFGEA 181


>gi|307545626|ref|YP_003898105.1| hypothetical protein HELO_3036 [Halomonas elongata DSM 2581]
 gi|307217650|emb|CBV42920.1| hypothetical protein HELO_3036 [Halomonas elongata DSM 2581]
          Length = 377

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 66/226 (29%), Gaps = 10/226 (4%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R+GD   A+      L+           + Q    +  W +A  +  +        ++ R
Sbjct: 123 RLGDTERARELLGDWLERHDGDADAHWLMAQLQAESSRWEQAADWAQRALAGDASASQQR 182

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L          + + +A     +   +       A   AA          +A  + E 
Sbjct: 183 LGLAATALQRAGRQEEALAVLERQLAGAEDDPQ---AWRRAAGLAQRMGDPGRAAALWET 239

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN------KESVESLVIVSKIALEMG 339
            W+        ++   +      G   RA  +           +S+E+  ++++      
Sbjct: 240 AWRRGVLSGSDDLMQRIRLHLAAGTPARAAEILSRALEEGSLDDSLENRRLLAEAWQAAR 299

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
             D+A +      + +   E +L L Q+        +      + A
Sbjct: 300 DHDRALSAWREVAERSDTAEDWLRLGQLASGWDR-LELAREALKRA 344


>gi|219109943|ref|XP_002176724.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411259|gb|EEC51187.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 336

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 49/173 (28%), Gaps = 10/173 (5%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            + L     +A   +  A       L+       A Y L     R    + A+ +  KA+
Sbjct: 145 THTLSGYEYMANEDFVKAIACFRQALRTDDKHYNAWYGLGAIYQRQEKFDLAEYHFGKAV 204

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENAD 238
            + P +  +   +        +  +A+  L++         +    RA + +A       
Sbjct: 205 ALHPTSSALRCNLGIAQFSNGKAYQALDTLSEAFHLDPRNPQARFQRASIYMAL------ 258

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 +  +  +   +            K      + ++A         ++P
Sbjct: 259 -HRPEEALSELCKVRDVAPREATVHFSLGKVYKKLGRTKEAMKCFLTAMDLDP 310



 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 86/215 (40%), Gaps = 16/215 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNR 225
             D  +A  + +++L ++P+  +       +Y+  +++ +AI    Q  + + K +N   
Sbjct: 122 QKDHETALTFFSRSLQLNPNFTYTHTLSGYEYMANEDFVKAIACFRQALRTDDKHYNAWY 181

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +  I +  E  D      + +   +++ L   S         +  S  K  +A   L +
Sbjct: 182 GLGAIYQRQEKFD-----LAEYHFGKAVALHPTSSALRCNLGIAQFSNGKAYQALDTLSE 236

Query: 286 IWKVNP-HPEI----ANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
            + ++P +P+     A+IY  L   E  + +L +     ++          + K+  ++G
Sbjct: 237 AFHLDPRNPQARFQRASIYMALHRPEEALSELCKVR---DVAPREATVHFSLGKVYKKLG 293

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374
              +A    + AM + P K    + + +E+    +
Sbjct: 294 RTKEAMKCFLTAMDLDP-KGSQTIKSALEKLEEPD 327


>gi|134079788|emb|CAK40923.1| unnamed protein product [Aspergillus niger]
          Length = 507

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  LA      A    +  +    T    +        S   G  + A 
Sbjct: 29  DTPLSSLIASAKSHLAGGSPREALVYFDAAVSRDPTNYLTLFQRGATQLSL--GKSSLAL 86

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNR 225
               + L + PD         +    + +W+ A+  L++  K++  E+   R
Sbjct: 87  EDFDRVLQLKPDFESALLQRARLKASSADWAGALGDLDKAGKRSTPEYQELR 138


>gi|156743909|ref|YP_001434038.1| hypothetical protein Rcas_3987 [Roseiflexus castenholzii DSM 13941]
 gi|156235237|gb|ABU60020.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 1092

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 29/216 (13%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            AR + +         +     L   Q+   +     A      + +             
Sbjct: 112 AARAIDALREALRLQSDADDQRLRLAQLLADQGASAEAATHYLELARR------------ 159

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKN--- 217
             +   G L  A   A  AL   PD     E +   +  LA+    AI            
Sbjct: 160 --AQARGSLEQAAELAEMALRCVPDNREAKELIAALHDALAQTVQSAIEATATAADATVL 217

Query: 218 ------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
                            +IA + E  + GD+  +      +LKL  +             
Sbjct: 218 PIIGTGGLRGAHLAIERIIALAHERQEAGDIDGAIEQYERALKLGTDRSDVFYSLGLLYQ 277

Query: 272 SQNKKRKAEVILEKI-----WKVNPHPEIANIYTHL 302
            +   ++A  +L+       + ++ H  +   Y  L
Sbjct: 278 ERGDYQRAVELLQGAAGDPEYALSAHYMLGQAYQAL 313


>gi|157876187|ref|XP_001686453.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68129527|emb|CAJ08070.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 425

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 52/141 (36%), Gaps = 20/141 (14%)

Query: 166 RIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQ---QYVLAKEWSRAITFLNQK--K 215
             G +    + A  A  I      P +P +   +++    + +  ++      L Q    
Sbjct: 258 AAGQVERQLQLAQAAYSIQERRLGPMSPQLAMTLLEVADAHRVNGDFYNQKALLEQAVEL 317

Query: 216 KNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSI--------MASIC 265
           +      ++  ++    +L +A     +        +E+LK+              A++ 
Sbjct: 318 QQRAFGQQHAQLIDTYVALGDACGQLENSKLQAQYYLEALKIARQRFQGRHIAIGKAAVN 377

Query: 266 AAKSLISQNKKRKAEVILEKI 286
           AA++ +S   K KA+ +L++ 
Sbjct: 378 AARAYLSHGNKAKAQALLDEA 398


>gi|332702377|ref|ZP_08422465.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552526|gb|EGJ49570.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 342

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 4/124 (3%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ES  +G    A  Y  +AL++ P       A  +         +A+   N+      EW 
Sbjct: 67  ESLALGQYELATNYLNRALEMDPRLDEAYLARGKALHALGNPEQALFDFNRAVSLRPEW- 125

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A+    R+           +  D  ++L L     +A      +L + ++  +A   
Sbjct: 126 ---AVAYYDRATAYLALERPQEALDDQRKALNLDPGLAVAHNDMGLALAALDRPEEALQA 182

Query: 283 LEKI 286
               
Sbjct: 183 FNAA 186


>gi|329114139|ref|ZP_08242901.1| TPR Repeat-Containing Protein [Acetobacter pomorum DM001]
 gi|326696215|gb|EGE47894.1| TPR Repeat-Containing Protein [Acetobacter pomorum DM001]
          Length = 534

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 24/188 (12%)

Query: 181 LDISPDAPWVTEAVVQQYVL--AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
              +P  P     + +      A  ++  +  L            N  +     +   A 
Sbjct: 5   AASAPTLPD-QLTLRRARTEIIAGHFNEMLAVLE------PFSTSNNDLAKTLYAYCLAG 57

Query: 239 KGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
                 +     + + +            +  L   +K+  AE +     +    P+ A 
Sbjct: 58  TNQPEEAAEILCDIASRHAGTEHPLQAL-SDLLAELDKRPLAEAVCRAALERT--PQDAR 114

Query: 298 IYTHLLS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           IY  L +        +  +  L+ A    ++   S+ S  +++   LE G  D+A A   
Sbjct: 115 IYDILGNLLVQCGQFDEAISLLRHA---VDLRPNSMHSHNLLAMALLEQGRFDEALAHLQ 171

Query: 350 LAMKIAPR 357
             ++  P 
Sbjct: 172 NVLETQPD 179


>gi|296531916|ref|ZP_06894719.1| thioredoxin [Roseomonas cervicalis ATCC 49957]
 gi|296267782|gb|EFH13604.1| thioredoxin [Roseomonas cervicalis ATCC 49957]
          Length = 309

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 42/111 (37%), Gaps = 5/111 (4%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-W 287
           L+A + +  ++GD   +        +    +  A    A++L++  ++ +A  ++E    
Sbjct: 139 LLAEAKQAVEQGDHQTALEIYAAVAQQEPENAEALAGLARALMALGEEEQALAVVENAPE 198

Query: 288 KVNPHPEIA----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
           K+  H EIA     +           +L    +    + +   + + ++  
Sbjct: 199 KIRNHAEIAGVRSALELAAEGREARARLAEFEQRLAADPDDHAARIELAVA 249



 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 2/116 (1%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
                L E + A+ +  +  A E    + Q       A+  L      +G+   A     
Sbjct: 135 PTAELLAEAKQAVEQGDHQTALEIYAAVAQQEPENAEALAGLARALMALGEEEQALAVVE 194

Query: 179 KALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
            A +   +   +      ++     +E    +    Q+     + +  R  L +A 
Sbjct: 195 NAPEKIRNHAEIAGVRSALELAAEGREARARLAEFEQRLAADPDDHAARIELAVAL 250


>gi|193212960|ref|YP_001998913.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
 gi|193086437|gb|ACF11713.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
          Length = 196

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 17/176 (9%)

Query: 199 VLAKEWSRAITFLNQKKKNAKE--------WNRNRAILLIARSLENADKGDMIASYHDAI 250
               ++  A+  +   K +                A +  AR++     G    +  D +
Sbjct: 17  AREGQYREALEHIEAGKYHQAIELLNVLAGPASRDARIRYARAVALLSTGLYRQAGTDLV 76

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHL-LS 304
            ++ L    + A       L+S  K+  A  +L K  +++P+       +A++Y  L  +
Sbjct: 77  FTVVLDREFLPAYRHLGYVLLSMGKEEAAIKVLHKALELDPNFVDAWGVLADVYMDLGEN 136

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           E     L +AL LE     + E    ++   L  G I    ++  L  ++ P    
Sbjct: 137 EKAFEALDKALELE---PRNSEVHCKLAMYYLSRGDIKGLRSEYELLKEMEPDVAA 189


>gi|157785563|ref|NP_001099099.1| transmembrane and tetratricopeptide repeat containing 4 [Bos
           taurus]
 gi|157279159|gb|AAI34549.1| TMTC4 protein [Bos taurus]
 gi|296481625|gb|DAA23740.1| transmembrane and tetratricopeptide repeat containing 4 [Bos
           taurus]
          Length = 524

 Score = 38.0 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 7/133 (5%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            ++  V + EW                     A +        ADKG+  A+     E++
Sbjct: 237 TLRCVVRSGEWRSEDHLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 292

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312
           +L    + A       L  +N+ ++AE +L    ++   P+ A  + +L + +N++ + +
Sbjct: 293 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNLGIVQNSLKRFQ 350

Query: 313 RALRLEEINKESV 325
            A +      +  
Sbjct: 351 AAEQSYRTAIKHR 363


>gi|326430017|gb|EGD75587.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 826

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 82/291 (28%), Gaps = 65/291 (22%)

Query: 134 RQYNIAHEKLEMML-------QIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISP 185
            ++  A    E  L                +Y SL     + G+ + A  +  KAL I  
Sbjct: 289 GEHGKAIAYYETALPIALRTEGEDGRNVAGLYDSLGIAYTKTGEYDKAIEHFEKALAIKV 348

Query: 186 -----DAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLE 235
                  P            Y+   E  +AI +  +      E    R+    L+     
Sbjct: 349 EVLGEKHPSTAHTYGNFGLPYLQKGENDQAIKYFERSLAIKAETLGERHPDTALVY---- 404

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
                ++  +Y +  E  K  +    A     ++L  +                  HP  
Sbjct: 405 ----NNIGGAYENKAEYGKAIEQFQKALAVKVETLGEK------------------HPST 442

Query: 296 ANIYTHLLS------------ENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSID 342
           A  Y +L +            E+    L+     L E +  + ++   + +  +      
Sbjct: 443 AQTYGNLGNAYYKQGKHDMAIEHAEKALQVFVETLGENHPNTAQTYKSMGRAYVGKSDYI 502

Query: 343 QAHAKAMLAM--------KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +A      A+        +  P      L   I Q  S + ++   + Q A
Sbjct: 503 KAMQCYKKALAITARTLGEKHPDTATAYLKVGILQFQSGDVEQARTYIQRA 553


>gi|325121166|gb|ADY80689.1| O-linked N-acetylglucosamine transferase OGT [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 545

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 20  DQALEQTMVAEFALAYDDIPNALHNYTVLAIKSNSTSIKQRALDV-ALEYNDLQAALNIA 78

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 79  THWVAQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 138

Query: 225 RAILLIAR---------------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           R +LL A                +   A  G +  +  +  ++L+         +  A  
Sbjct: 139 REVLLTALRSSAEKDNPSILALIANLEAQNGQLQTALTNINKALRRRPKVTSFILMKANL 198

Query: 270 LISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K  + N       +A I   +    +   L++  ++ E N ++ E
Sbjct: 199 LIALSDQEGALKWYAKSSRKNKKNLDIRLAEIRYLIQINQSQLALEKLEKIIETNPKAEE 258

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 259 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 312



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 365 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 422

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 423 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 464


>gi|269959390|ref|ZP_06173773.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835827|gb|EEZ89903.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 404

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 71/199 (35%), Gaps = 35/199 (17%)

Query: 175 RYATKALDISPDAPW-VTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            Y   A   +P+        V  VQ+ +  +++S AI+ LN    + K+   +RA+LL  
Sbjct: 17  AYGAPAFANTPELSDRTFRTVNKVQELIATEKYSDAISKLNSALGSTKKKKYDRAVLLQQ 76

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIW 287
                + K D   +     E+LKL    +  +       A+  +++ K +++   + + +
Sbjct: 77  MGFLYSLKDDYPKAAKYFAEALKLDALPVPVAQQVRYSLAQLYLAEGKFKQSVNTMNEWF 136

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA--H 345
           K+               E                     + + ++   +++     A   
Sbjct: 137 KI----------AETTEEKPQ----------------AHAYITLASAYIQLEDYRNAIPP 170

Query: 346 AKAMLAMKIAPRKEIFLLL 364
            K  +AM   P +  + LL
Sbjct: 171 TKKAIAMTKNPSESWYQLL 189


>gi|332016254|gb|EGI57167.1| Tetratricopeptide repeat protein 28 [Acromyrmex echinatior]
          Length = 2027

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 69/219 (31%), Gaps = 26/219 (11%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
           +H+R  +   +A    L + A   + +A +    + +   FH + L              
Sbjct: 699 MHQRQLNLARQAADRCLEAAAYGALGIAHRATKNLDKALGFHTQELTL------RQEAGD 752

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEA 193
                     +  +           Y  + +     L  A+  A   ++       +  A
Sbjct: 753 LRGECRAHGNLGAV-HMAL----GQYTHAVKCYQEQLERAKELADSGVEAQ-ALGNLGIA 806

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +        +  AI +  Q+    +      A+L  AR+L N   GD   +  D  E++
Sbjct: 807 RLNM----THYEDAIGYFEQQLATLEPLTTGTALLDKARALGNL--GDCYEALGDLEEAI 860

Query: 254 K-LCDNSIMASICAA-----KSLISQNKKRKAEVILEKI 286
           K        A+   +     ++     + R+A   L++ 
Sbjct: 861 KCHEQQLTAATKLKSIRDQERAYRGLGRAREATGNLQEA 899


>gi|268686233|ref|ZP_06153095.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268626517|gb|EEZ58917.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 614

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 131 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 184

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 185 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 244

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 245 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 297

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 298 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 352

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 353 YADRKDYAKVRQWLKK-VSAP 372


>gi|239981920|ref|ZP_04704444.1| hypothetical protein SalbJ_20965 [Streptomyces albus J1074]
 gi|291453773|ref|ZP_06593163.1| predicted protein [Streptomyces albus J1074]
 gi|291356722|gb|EFE83624.1| predicted protein [Streptomyces albus J1074]
          Length = 230

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%)

Query: 422 IPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI 481
            PT  P  I +E  +   +            +    +  P+  + +  E +   P DP  
Sbjct: 65  EPTDEPTEIPTEPTDEPTDPEPTDPGPTDPTDPEPTDPEPTDPEPTDPEPTDPEPTDPGT 124

Query: 482 RQPDDPGIKE 491
             P DPG  +
Sbjct: 125 PDPTDPGTPD 134


>gi|256375213|ref|YP_003098873.1| hypothetical protein Amir_1071 [Actinosynnema mirum DSM 43827]
 gi|255919516|gb|ACU35027.1| Tetratricopeptide TPR_2 repeat protein [Actinosynnema mirum DSM
           43827]
          Length = 331

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 6/147 (4%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +     N   A      +    D      +   A  +L L  +   A   AA +L    
Sbjct: 28  LRPVLAVNPRHAQAWCELAAALLDVDQPDPALSAAKRALVLDGDHSWAQRLAALALSELG 87

Query: 275 KKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329
           + R+A V   +  +  P        +A++      +     +  A     +  E   +  
Sbjct: 88  RHREAVVSARECVRRKPGDWRCLVVLADVLAAA-PDGRREAVAVAREATRLAPEQARTFQ 146

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++   AL +G  D A      ++++ P
Sbjct: 147 VLGDAALRVGDWDTAEHAYRTSLRLDP 173


>gi|158333799|ref|YP_001514971.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158304040|gb|ABW25657.1| TPR domain protein, putative [Acaryochloris marina MBIC11017]
          Length = 234

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 3/113 (2%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+    +A+   P+       +      AK W  A  +L Q      E+ R  A LL+ +
Sbjct: 91  AEEAFQEAISKEPNYLDALWGLASVATAAKRWEEAQAYLQQILSLDSEYKRGDASLLLGK 150

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            L  ++      +    I+ +K   +   A++  A       +K+ A  IL+ 
Sbjct: 151 VLVASE--QRELAKPHLIQDIK-AWSHPEAALILATLQAEDGEKQDAYEILKT 200


>gi|186475514|ref|YP_001856984.1| tetratricopeptide repeat protein [Burkholderia phymatum STM815]
 gi|184191973|gb|ACC69938.1| Tetratricopeptide domain protein [Burkholderia phymatum STM815]
          Length = 391

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 90/267 (33%), Gaps = 42/267 (15%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATK 179
           LL + +A A   +  A   L+ +L      P +    +  L  E       + A     +
Sbjct: 8   LLVIPVAFAFG-WVAARYDLKALLSESANLPRSYFRGLNFLLNE-----QPDQAIDAFIE 61

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            + + P+   +  A+   +    E  RAI         A      R   L     +    
Sbjct: 62  VVKLDPETIELHFALGNLFRRRGETDRAIRVHQNLLSRADLPVTERDHALFELGQDFLKA 121

Query: 240 GDMIASYHD--AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           G +  +     A+ES          ++ A ++L++  +       +EK W          
Sbjct: 122 GLLDRAEETFNALESGDY-------ALGAQRALLTIYQ-------IEKDWNK-------- 159

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                 S +T  +L+       ++KE       +++ AL+    D++  +  LA+K  P+
Sbjct: 160 ------SIDTARRLETMGA-ASLDKEIGHFHCELAQEALQQKKSDESRRQLELALKAHPQ 212

Query: 358 -KEIFLLLAQIEQANSHNTDKILYWTQ 383
                +L   ++ A       I  W +
Sbjct: 213 NVRATILFGDVDAAAGQYEAAIAQWLR 239


>gi|37520776|ref|NP_924153.1| hypothetical protein glr1207 [Gloeobacter violaceus PCC 7421]
 gi|35211771|dbj|BAC89148.1| glr1207 [Gloeobacter violaceus PCC 7421]
          Length = 535

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 87/268 (32%), Gaps = 15/268 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++   +  L     + V             LL  Q          A       + +    
Sbjct: 150 ALGDGDGALMHLDRAVVLDARKERAYLQRGLLRAQ----RGDREGARADYLRAVVLAHDY 205

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             A   L   + + G+  +A     + ++++   P          +  KE+  A    ++
Sbjct: 206 VPAHLQLAALAQQRGEYAAAVETLDRVIELNKSHPLAHANRGLAKLKLKEYRAAAADFSR 265

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                       A+L + R++  A+  D  A+  D  E+++L      A+    + L+  
Sbjct: 266 AITLNAPAP---AMLRLNRAVALAELRDHPAALTDLGEAIRLDPKL--AAAHGNRGLVRT 320

Query: 274 NKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESL 328
                   I +   ++   P  A+ Y         S +  G L    R  +++  S  +L
Sbjct: 321 RSGDFKGAIADFDRQLALDPSSADAYIGRADARTRSGDLQGALADFDRAVDLSPSS-FAL 379

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              +++ + + +  +A A     + + P
Sbjct: 380 RSRAELHVRLKAYKEAIADYDRVIALEP 407



 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 48/272 (17%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           + Q  L    Y    ++   ML+  A  E A         R+GDL      A +A+ + P
Sbjct: 42  QAQTHLRRSDYARLADECSRMLRQDAAFEPAYRWRAQARLRLGDLKGGLADAEQAIRLVP 101

Query: 186 DAPWVTEAVVQQYVLA----------------------------------KEWSRAITFL 211
                     + +  A                                   +   A+  L
Sbjct: 102 TNAEAYLLRGELHATAGTAAAARADYLQAVQASPDDAEGLRVRAMAQYALGDGDGALMHL 161

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           ++      +  + RA L   R L  A +GD   +  D + ++ L  + + A +  A    
Sbjct: 162 DRAVV--LDARKERAYL--QRGLLRAQRGDREGARADYLRAVVLAHDYVPAHLQLAALAQ 217

Query: 272 SQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLS------ENTVGKLKRALRLEEINKES 324
            + +   A   L+++ ++N  HP +A+    L                RA+ L       
Sbjct: 218 QRGEYAAAVETLDRVIELNKSHP-LAHANRGLAKLKLKEYRAAAADFSRAITLNAPAP-- 274

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
               +  +    E+     A      A+++ P
Sbjct: 275 AMLRLNRAVALAELRDHPAALTDLGEAIRLDP 306


>gi|242280662|ref|YP_002992791.1| hypothetical protein Desal_3201 [Desulfovibrio salexigens DSM 2638]
 gi|242123556|gb|ACS81252.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 571

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 4/128 (3%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
             E+ Y  A +  +   +   +   A+ SL     R GD  +A     +AL I+PD    
Sbjct: 436 EREKNYTEAAKHFKAAFKADPSHYKAMTSLASILSRKGDPYTALDLYQRALQINPDYAPA 495

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                  Y+   ++  AI  + + ++   +   +    +I   L    +GD  A+     
Sbjct: 496 LGNRGIVYMQQGKFESAIADIRKAQQLEPQQPNH----MINMGLLYYMRGDNSAAKEWLR 551

Query: 251 ESLKLCDN 258
            +L++  N
Sbjct: 552 RALQVDPN 559



 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 49/210 (23%), Gaps = 59/210 (28%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
            M IA     LAR+               LV LL          +  +            
Sbjct: 364 YMFIAFGVARLAREGRIPGKPALAAGTAVLVVLL-AGAYTQAGHWKDSKALY-------- 414

Query: 152 TREFAV----------YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
           TR  AV          Y    E  R  +   A ++   A    P                
Sbjct: 415 TRALAVTENNHHMHYNYGNLLE--REKNYTEAAKHFKAAFKADPSHYKA----------- 461

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
                                      + + +   + KGD   +      +L++  +   
Sbjct: 462 ---------------------------MTSLASILSRKGDPYTALDLYQRALQINPDYAP 494

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           A        + Q K   A   + K  ++ P
Sbjct: 495 ALGNRGIVYMQQGKFESAIADIRKAQQLEP 524


>gi|194364501|ref|YP_002027111.1| tetratricopeptide repeat-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194347305|gb|ACF50428.1| Tetratricopeptide TPR_2 repeat protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 564

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 92/277 (33%), Gaps = 23/277 (8%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +      +++ +S+Q    +     LL  +IA   ++Y  A +    +       E  +
Sbjct: 291 GDKAALSNLYNELSRQAAKPDPAQ-RLLLGKIAEYLKRYPEAVQWYHSVPGGDELSEARL 349

Query: 158 YSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +   ++        L+      + A+              +    A + +  +  L + 
Sbjct: 350 RAANAQALAGRLPLALDEVHAIQSDAVVDDDVRRDAYLLEAELRQRADDSAGELDALARG 409

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQ 273
                + N     LL AR+L    + D+  +  D  + L     ++ A +          
Sbjct: 410 LAAYPDDNG----LLYARALTWERRDDIPRAEADLRKILVTEPENVPALNALGYTLADRT 465

Query: 274 NKKRKAEVILEKIWKVNPHPEIAN--------IYTHLLSENTVGKLKRALRLEEINKESV 325
            + ++A  ++++       P+ A         +Y     E  + +L+RA  L +      
Sbjct: 466 GRLQEALELIDRARVAE--PDNAAIVDSYGWVLYRLGRKEEALVQLRRAWTLAK----DP 519

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           E    V ++   +G  D+A      A K+ P     L
Sbjct: 520 EIASHVGEVLWVLGKHDEARHFFEEAAKLDPENRALL 556


>gi|325661059|ref|ZP_08149686.1| hypothetical protein HMPREF0490_00419 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472566|gb|EGC75777.1| hypothetical protein HMPREF0490_00419 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 837

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 20/173 (11%)

Query: 103 ARKMHSYVSQQHTFHN-EYLVYLLEVQIAL-AERQYN-------IAHEKLEMMLQIPATR 153
           AR+    + +     + E+   L+    AL A  QY         A +   + L     R
Sbjct: 71  AREALEQIRKLGMSESAEHGTTLVNAATALRAAGQYEASLEAYREAEQIYSICLPSEDAR 130

Query: 154 EFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEA-------VVQQYVLAKEWS 205
              +Y+    +  R      A     KAL +        E        + + Y+   + S
Sbjct: 131 FAGLYNNMSLAYERQNAHEEALSCLQKALAVILQTADAKEETAATYTNLAELYLKTGQIS 190

Query: 206 RAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             +  L +     +     + + A  L A        G    +     ++L++
Sbjct: 191 EGLNCLEKALVLYEAGNTQDPHYAAALSACGHGYYLAGRYEEAIDSYTKALRM 243


>gi|296159138|ref|ZP_06841965.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. Ch1-1]
 gi|295890699|gb|EFG70490.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. Ch1-1]
          Length = 607

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 18/182 (9%)

Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
           + +  N+ +       +  A  +++ A    E +L   +    A++ L   S R+     
Sbjct: 11  RTSLSNDVVTITAHADVCFAAGRHHEAIAAYERVLAEQSQNVHALHRLGLASFRVDRPER 70

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           ++ Y  +AL+I+P+   + E               I  L  +   A+ +      L    
Sbjct: 71  SREYLDRALNIAPERADIWEH-----------RGLIAALGGELIAAEAFYHRAMSLGGGT 119

Query: 233 SLENADKGD-------MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           +  + + GD       +  +    +++L+L      A    A+     +++  A     +
Sbjct: 120 ASLHRNLGDCLKLSMRLAEACRHYLDALELEPALHHAVRALARISTELDRREDAADCWLR 179

Query: 286 IW 287
            W
Sbjct: 180 AW 181


>gi|254421483|ref|ZP_05035201.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196188972|gb|EDX83936.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 1004

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 67/224 (29%), Gaps = 34/224 (15%)

Query: 97  AHNIPLARKMHSYVSQQHT----FHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIP 150
           A N   A  +               +   +  L+   ++      Y+ A    E  L   
Sbjct: 55  AGNYAEALPLAIEALAIRESALGLEHPDTINSLKDVGELHFQLSDYDSAQSFYEKALSRS 114

Query: 151 A--------TREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAV 194
                    T    +  L       GD N A     + + I             +   ++
Sbjct: 115 EAALGQDHYTTAVVLNGLAKVYVEQGDYNRAIPMFERTVAIIENANGAEHIHVAYALTSL 174

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIAS---YH 247
            + YV   ++  A+    +     +      + + A  L + +   A  GD  A+   Y 
Sbjct: 175 GKAYVDVGDYETALPAFERSLVIRESTFGTESEDYASGLHSIANLYAATGDFTAAIPVYE 234

Query: 248 DAIESLKLCD---NSIMASICA--AKSLISQNKKRKAEVILEKI 286
            AI + K      ++ +A+  A    +    N   KA  ++E+ 
Sbjct: 235 RAIAAYKADPQSEDTRLAASLAGLGSTYQGLNNYSKATPLVEQA 278


>gi|86359198|ref|YP_471090.1| O-linked GlcNAc transferase protein [Rhizobium etli CFN 42]
 gi|86283300|gb|ABC92363.1| probable O-linked GlcNAc transferase protein [Rhizobium etli CFN
           42]
          Length = 288

 Score = 38.0 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 8/135 (5%)

Query: 130 ALAERQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                Q + A         L     R +    L ++     D   A    +KA+ ++P++
Sbjct: 148 YRMAGQDDAAFNDFSKAIQLGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAPNS 205

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           P         Y+   +   A    N    +A + N N A     ++L    +GD   +  
Sbjct: 206 PEPYNGRGISYIALNDDDNAFADFN----HAIDLNGNIAESWANQALVYERRGDKAKAAR 261

Query: 248 DAIESLKLCDNSIMA 262
               ++ L      A
Sbjct: 262 SYRHAVGLDPKYQPA 276


>gi|328543230|ref|YP_004303339.1| TPR repeat [polymorphum gilvum SL003B-26A1]
 gi|326412976|gb|ADZ70039.1| TPR repeat [Polymorphum gilvum SL003B-26A1]
          Length = 568

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 46/173 (26%), Gaps = 20/173 (11%)

Query: 125 LEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L  ++A  +  +  A    E  +   P        + +      G++  A  YA +    
Sbjct: 34  LAGRLAGQQNDFASASAFFEETLAADPDNPFLLERA-FILKTANGEIAKALAYAEEMETA 92

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIARSLENAD 238
             D       V   +V   ++  A   L                R  A+L    + E   
Sbjct: 93  GIDNFLARLVVAVGHVRNGDYRSAAAELETAGAGPLADLTSGITRAWALLGTGNADEALA 152

Query: 239 KGDMIASYH--DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             D +      D  ++             AA       ++  A   +E  +  
Sbjct: 153 AIDALEGPEWFDVFKAN-----------HAALIAEQAGRQDLALEKIEAAYNA 194


>gi|218885460|ref|YP_002434781.1| hypothetical protein DvMF_0356 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756414|gb|ACL07313.1| Tetratricopeptide TPR_4 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 402

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 1/120 (0%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R + ++   +    +   +      +      +  A  +   +   PA   + V     +
Sbjct: 112 RALAAFDEARALGADPEQITFELALLHADSGAFQEAAAQYARLGFRPAQAHYMVRH-AED 170

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             R G  + A+    KA+ + P A     A +     A EW RA   L +  +      R
Sbjct: 171 LDRCGRPDEARTLLAKAVKVYPGAVEAWRARLVMAARAGEWRRAGKLLREGLERVPASIR 230


>gi|327542967|gb|EGF29416.1| ASPIC/UnbV domain-containing protein [Rhodopirellula baltica WH47]
          Length = 1053

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GDL  A++     L  SPD P     + Q +  + +   AI  L    ++      +
Sbjct: 121 IAEGDLRGAEKILHPYLIASPDDPIALFTLAQLHAASDDLETAIKTL----RHPAIQESD 176

Query: 225 RAILLIARSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
            A+  +  + +     G    +     + L++  +++M     A  +I   + + A+  L
Sbjct: 177 AALPALGTTADWLVQLGRPEEAADCYRQMLRVAPDAVMIHRRLAGLMIRMGRPQLAQGSL 236

Query: 284 EKIWKVNP--HPEIANIYTHLLSEN--TVGKLKRALRLEEIN 321
            ++ +      PE+A + +    ++   +G + +A +L + +
Sbjct: 237 RQLCRSGDVRRPELAALISISQVDSSRPIGPVAKARQLAKQH 278


>gi|332716430|ref|YP_004443896.1| thioredoxin [Agrobacterium sp. H13-3]
 gi|325063115|gb|ADY66805.1| thioredoxin [Agrobacterium sp. H13-3]
          Length = 322

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 18/141 (12%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            ++A + +    GD   +       ++    +  A    A+ +I+  +  +A  +L    
Sbjct: 152 AVLAEAKQLLADGDHNGAAQLFGAVMQADPENAAAIAGIAECMIAVGQYERASELL---- 207

Query: 288 KVNPHPEIANI-----------YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
              P    A+            Y           L+R L L   + ++ E+ V ++K+  
Sbjct: 208 SSLPAEVAADAGIQLVSKKIAQYEEARKIGDPVALERDLAL---DPDNYEARVKLAKVLN 264

Query: 337 EMGSIDQAHAKAMLAMKIAPR 357
             G  D+A    +  M+    
Sbjct: 265 AQGRRDEAADHLLYVMRKDRT 285


>gi|308064052|gb|ADO05939.1| paralysed flagella protein [Helicobacter pylori Sat464]
          Length = 803

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 58/185 (31%), Gaps = 34/185 (18%)

Query: 127 VQIALAERQYNIAHEKLEM-MLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +       Y  A    +  +L+   +R      +  L  E+    DL+SA     +A  
Sbjct: 278 AKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMR-LAIEAAEGSDLSSASMLFKEAFS 336

Query: 183 ISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            + D    +E  +   +  +  + ++ A   +++  ++  ++           +L+    
Sbjct: 337 NAKDKESASEIALNWVEAEINYQNFNNAKYLIDKVVQSNPDYISK----HSESALDLLKL 392

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
                    AIE               A  L++Q+   KA        K     ++  +Y
Sbjct: 393 LKKNQMNESAIE--------------IAHLLLNQDDDAKA--------KEQALYDLGALY 430

Query: 300 THLLS 304
             +  
Sbjct: 431 ARIKD 435


>gi|218288153|ref|ZP_03492452.1| TPR repeat-containing protein [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241512|gb|EED08685.1| TPR repeat-containing protein [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 206

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 5/115 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT--REFAVYSLYFESCRIGDLNSAQRYAT 178
             L   + A A     +A +  +  +Q  P +     A+ ++Y E  R      A  Y  
Sbjct: 84  AQLNAAESASANGNTALAIQYFKRAVQANPKSGLALTALGNMYRE--RENQPKEAIPYYQ 141

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           K++ + P   W    + Q Y+  KE S A   L Q  KN  + +   A +    +
Sbjct: 142 KSIQVDPSYGWAYWQLAQAYLSLKETSLAKQTLEQGLKNVSKSDTAYADIQSTLA 196


>gi|317014666|gb|ADU82102.1| flagellar functional protein [Helicobacter pylori Gambia94/24]
          Length = 803

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 75/242 (30%), Gaps = 54/242 (22%)

Query: 127 VQIALAERQYNIAHEKLEM-MLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDI 183
            +       Y  A    +  +L+   +R    A   L  E+    DL+SA     +A   
Sbjct: 278 AKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMHLAIEAAEASDLSSASMLFKEAFSN 337

Query: 184 SPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           + D    +E  +   +  +  + ++ A   +++  ++  ++           +LE     
Sbjct: 338 AKDKESASEIALNWAEAEINYQNFNNAKYLIDKVVQSNPDY----LSTHSELALELLKLL 393

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
                   AIE               A+ L++Q+   KA        K     ++  +Y 
Sbjct: 394 KKNQMNESAIE--------------IAQLLLNQDDDVKA--------KEQALYDLGALYA 431

Query: 301 HLLSENTVGKLKRALR--LEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                    ++K      L  +   ++  E         L+  S+ +A  +  L      
Sbjct: 432 ---------RIKDFKNAHLYNLRYLQDHAE---------LDKASVVRARDEKALFSMEGN 473

Query: 357 RK 358
            +
Sbjct: 474 TQ 475


>gi|296216324|ref|XP_002754505.1| PREDICTED: tetratricopeptide repeat protein 36-like [Callithrix
           jacchus]
          Length = 189

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 11/141 (7%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            Q+  ++   +  +   +   GDL++A     +A+ + P+         Q   L  + + 
Sbjct: 46  AQLEQSKALELQGVM--AAEAGDLSTALERFGQAICLLPERASAYNNRAQARRLQGDVAG 103

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI------ 260
           A+  L +  + +    R      + R L    +G    +  D   + +L           
Sbjct: 104 ALEDLERAVELSGGRGRAACQSFVQRGLLARLQGRDDDARRDFERAARLGSPFARRQLVL 163

Query: 261 --MASICAAKSLIS-QNKKRK 278
               +    + L     + R+
Sbjct: 164 LNPYAALCNRMLADMMGQLRR 184


>gi|302554480|ref|ZP_07306822.1| transcriptional regulatory protein [Streptomyces viridochromogenes
           DSM 40736]
 gi|302472098|gb|EFL35191.1| transcriptional regulatory protein [Streptomyces viridochromogenes
           DSM 40736]
          Length = 958

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 17/215 (7%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            D+   A+  G           A ++   V  Q T H +    L      L+++   +  
Sbjct: 492 QDRVRAAVALGTALAGRGRARAAVEVLRTVDGQLTGHPDLGATLQTASALLSDQDQTVRR 551

Query: 141 EKLEMMLQI---------PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           +    +            PATR   V      +    D ++ ++   +AL   P  P   
Sbjct: 552 DVYRCLSATAERSPELVGPATRALLVRYAATAALTSAD-DAMRQV--RALLAEPAHPLTE 608

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY--HDA 249
             ++       +W+  +   ++         R   +L    +     + D+ A+   +  
Sbjct: 609 PFLLGTAAAVAQWADELDEADRLVDRGLAGQRPD-LLHPMHAALLNTRADIAAARGEYAL 667

Query: 250 IESLKLCDNSIMASICAAKS--LISQNKKRKAEVI 282
           + +      +  ++I A     L+   +  +A  +
Sbjct: 668 LPAEPPTPANGPSNIHATTLLALVETGRSAEARRL 702


>gi|240127836|ref|ZP_04740497.1| putative periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 612

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 129 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 182

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 183 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 242

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 243 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 295

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 296 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 350

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 351 YADRKDYAKVRQWLKK-VSAP 370


>gi|239907804|ref|YP_002954545.1| hypothetical protein DMR_31680 [Desulfovibrio magneticus RS-1]
 gi|239797670|dbj|BAH76659.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 978

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 18/147 (12%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  +      + + A      M          R +A+Y +  E+    +   AQ YA +A
Sbjct: 807 LVAEALENLGEASRALPLWTKMAGDRDLEAEKRCYALYFVAKEAMAKKEWEKAQLYAGEA 866

Query: 181 ---LDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRA-----IL 228
                 +   P   +A V   + A     ++S+A+       K  KE + + A     I 
Sbjct: 867 DFMFKETGRDPDKRKAAVNIQIEAARALGDYSKALKLAEAYAKLCKEGDDDYAGNRMRIA 926

Query: 229 LIARSLENAD--KGDMIASYHDAIESL 253
            I R++ + +  +  + A    A ESL
Sbjct: 927 AIQRAMGDVEGWRATLTAMRDAAPESL 953


>gi|121607701|ref|YP_995508.1| hypothetical protein Veis_0708 [Verminephrobacter eiseniae EF01-2]
 gi|121552341|gb|ABM56490.1| TPR repeat-containing protein [Verminephrobacter eiseniae EF01-2]
          Length = 178

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 9/160 (5%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           LA        +     +  +  LL+  Q A A     +A ++L    + P  R   + +L
Sbjct: 15  LALTALPGAGRAQADDHADISALLQSGQAAQA---LTLAEQRLTEHPRDPQLRF--LRAL 69

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                  G+   A    T+     P+ P     +   Y    +W +A   L    +    
Sbjct: 70  AQ--TDAGEPERAIASFTELTQEFPELPEPYNNLAVLYARQNQWDQARATLEMALRANPG 127

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           +   +  L    +   A +    A   DA  +  +     
Sbjct: 128 YATAQENLGDIYAW-LASQAYSKAMQLDANSAASVRPKLA 166


>gi|87309467|ref|ZP_01091602.1| hypothetical protein DSM3645_24235 [Blastopirellula marina DSM
           3645]
 gi|87287775|gb|EAQ79674.1| hypothetical protein DSM3645_24235 [Blastopirellula marina DSM
           3645]
          Length = 167

 Score = 38.0 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 8/129 (6%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
                +K + A+  +  RA   +  +      G+         ESL L  +SI A   AA
Sbjct: 33  RDVEERKAELAETLSERRADTQLKAAQARFAAGETAKCRTLVEESLSLRPDSIPALRLAA 92

Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE--NTVGKLKRALRLEEI 320
           +  +++++   A     ++ +V P     H  +      +  +        +RA +L   
Sbjct: 93  EVALAEDRGADAISYYRRLSEVQPGDAQTHHLLGVA-LEIEGQVIEANQHFERAAQLAPG 151

Query: 321 NKESVESLV 329
           N     S +
Sbjct: 152 NPIYQMSQL 160


>gi|253699259|ref|YP_003020448.1| hypothetical protein GM21_0616 [Geobacter sp. M21]
 gi|251774109|gb|ACT16690.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 647

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 4/188 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + +  Y +   T   +  + L   +  +  ++ + A E  +  L++      A   L   
Sbjct: 389 QALEQYQALIKTNPADPALQLKLARAYVNSKELDAAAEAYQAALKLDGESVDAHRELANL 448

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +   ++ A     + L +  D   V  A+   YV  K +      L Q  K+  E + 
Sbjct: 449 QRKRNLMDEAAAEYQEVLRLKKDDQEVRTALTAIYVKNKNYDA----LAQLLKDGVELSP 504

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           N         L    + D  A+     E++ L  +   A     +  +      +A+  L
Sbjct: 505 NDPNAHYKLGLVYEFQKDYTAATAQYKEAVTLKPDHAKALNAMGRVQMKDGHLAEAKESL 564

Query: 284 EKIWKVNP 291
           E   K +P
Sbjct: 565 EAARKADP 572



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 58/210 (27%), Gaps = 25/210 (11%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFAVY 158
           ++  +              + L+          + A  +    L +     PA+    + 
Sbjct: 48  KRKEAEKRVAELCPTGPAGHYLKGLTFERSGNVDAAISEYRETLSLDPEFYPASGNLGLL 107

Query: 159 SLYFESCRIGDLNSAQRYAT--KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
            L     + G   +A   A   KA D    A           V+A +    +   +  + 
Sbjct: 108 HL----QKGGGEEAAVELAAGLKAGDPRYHAGLA-------RVMADKQMHLLAIFHYNEA 156

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            A   +   A L    +      G    +      ++ L  ++  A       L+ + + 
Sbjct: 157 IAAFPD--DAALYTGVAASYNAAGQKQKAEDAYRRAMVLQPDNAQARFGLGALLLERGEV 214

Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTH 301
            KA   L+      P     H  +A  Y  
Sbjct: 215 DKAVGELKLAAIAQPANRETHRLLAEAYAR 244


>gi|158337029|ref|YP_001518204.1| hypothetical protein AM1_3902 [Acaryochloris marina MBIC11017]
 gi|158307270|gb|ABW28887.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 497

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 11/140 (7%)

Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAV 194
            A +    +              + E     + +   +AQ+   +A+ ++P+        
Sbjct: 289 RAADAYR-LRADARMASIGW--SFMEGRSRKNRDLVLAAQQDINEAIRLNPNLSDAYTIR 345

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                + ++ + A   +NQ  +     +   A+  I R+   AD+     +  DA ++LK
Sbjct: 346 AYLKFVLQDGAGATADINQALR----LDPQNAMPYILRANLLADQRQWQMAIADANQALK 401

Query: 255 LCDNSIMAS-ICAAKSLISQ 273
           L  NS  A+   +A+ L   
Sbjct: 402 LDANSPYAAFAYSARGLARA 421


>gi|156407868|ref|XP_001641579.1| predicted protein [Nematostella vectensis]
 gi|156228718|gb|EDO49516.1| predicted protein [Nematostella vectensis]
          Length = 1305

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 19/148 (12%)

Query: 196  QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            +    ++E+ +AI F     K A  ++      L+A +       D+ A     ++ LK 
Sbjct: 884  EISTASREYDKAINF----YKEALVYDDTHIQSLLALAKLYLTVDDLDACQQQCVQLLKA 939

Query: 256  CDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
              ++  A++  A  +  +N+   A      +LE+  K   +  +A +         +  L
Sbjct: 940  DPDNDAATVMMADLMFRKNEYDSATYHFQQLLER--KPGHYTALARL---------IDLL 988

Query: 312  KRALRLEEINKESVESLVIVSKIALEMG 339
            +RA +LEE  K   ++   + + A++ G
Sbjct: 989  RRAGKLEECPKYLEQAENALPRAAMDAG 1016


>gi|317025320|ref|XP_001388834.2| RNA polymerase III transcription factor TFIIIC subunit (Tfc4)
           [Aspergillus niger CBS 513.88]
          Length = 1077

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 52/158 (32%), Gaps = 16/158 (10%)

Query: 160 LYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L+ E+      GD + A     +A+ ++P+       + + ++   E  +A+T L     
Sbjct: 152 LHSEATSAFIDGDYDRAIDLTKRAIQVNPEMFAAHSLLSEIFLAQGEKDKALTALFSGAH 211

Query: 217 NAKE-----WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
              +         R IL  A         D+I  Y   IE   L   +  A    A    
Sbjct: 212 TRPKDPTVWAKVARMILERAGEERQGALNDVIYCYSRIIE---LDPKNYNARFQRAAIYR 268

Query: 272 SQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304
                 +A    E+I K  PH       +A  Y  L  
Sbjct: 269 ELGYNGRAATEYERILKEVPHNARALRHLAETYIDLND 306


>gi|209964133|ref|YP_002297048.1| TPR domain protein [Rhodospirillum centenum SW]
 gi|209957599|gb|ACI98235.1| TPR domain protein [Rhodospirillum centenum SW]
          Length = 449

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 103/323 (31%), Gaps = 52/323 (16%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLE---MMLQIPATR 153
           N   A ++           +     LL    Q+ +A  Q+  + +K +    + Q P   
Sbjct: 114 NYRRAAEIFEQALALKILPDAQQHSLLYNLAQLYMATDQFQKSLQKFKEWFAVAQNPQAE 173

Query: 154 E-FAVYSLYFESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITF 210
              A  ++Y +   + D+ SA     KA+ +SP     W  + ++  Y   K++++    
Sbjct: 174 AYVAYANVYAQ---LEDMRSAIPLMEKAISMSPNPKKEW-YDFILGLYFETKQFTKVADT 229

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIMASIC--- 265
           L     +     +   I L     E   + + +A    A ++  L  +   +  +     
Sbjct: 230 LEL-LISRYPKEKRYYIQLAGIYSEIKKEKETLAVMELAYKAGHLDKSEELVQLAQLWMY 288

Query: 266 -----AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEE 319
                    L+  N ++      ++ W++     +AN +        ++  L+RA  L  
Sbjct: 289 HDVPYRGALLLQANMEKGRIKGTKENWEL-----LANAWIASREIPKSIDPLRRAAEL-- 341

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---APRKEIFLL-------LAQIEQ 369
                 E  + +++  LE      A       +       +   FLL       L  +++
Sbjct: 342 --SNDGEGFIRLAQAYLEREDWKNAVDALEKGIAKGGLKNQGSAFLLEGVASFNLKDLDK 399

Query: 370 ANSHNTDK---------ILYWTQ 383
           A                   W  
Sbjct: 400 AERAFNRAAEFSSTARTARQWLT 422


>gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 365

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 69/229 (30%), Gaps = 16/229 (6%)

Query: 134 RQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           ++Y  A    E       T    F + S Y+      D  +A  Y   A+ ISP+     
Sbjct: 60  KKYEKAAVLFEAATTKNPTGKAFFNLGSAYYMMQAYDDAINAYIY---AVKISPNYAEGY 116

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +   Y  +  +  A                + A   + ++      G   ++     +
Sbjct: 117 YNLGLAYYQSGNFYSAKDAF--AYVVELRAGDSDAYYNLGKA--CVRIGLDKSAVDAYQK 172

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSEN 306
           +  L  N I A      S     +  KA   L K  ++  + P     +   Y      +
Sbjct: 173 AADLDPNFIDAYYNLGLSYKRLEQYDKAVAALNKAVQIGANDPAIFFSLGECYQGA--GD 230

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               +       ++N    E L  +    + +   DQA      A+++ 
Sbjct: 231 NNQAIVAFQNAFKLNSNDPEILYQIGVSHVNLEEYDQAIRAFGSALRMN 279


>gi|323493497|ref|ZP_08098619.1| TPR domain-containing protein [Vibrio brasiliensis LMG 20546]
 gi|323312320|gb|EGA65462.1| TPR domain-containing protein [Vibrio brasiliensis LMG 20546]
          Length = 245

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 52/159 (32%), Gaps = 9/159 (5%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
              AL     + A    +  L+          +        + G  + A  Y  K   +S
Sbjct: 32  ANTALINGHSDNALLIYKQRLESNPEDIELLFLAGTAC--NQSGRYDEALHYLNKGQALS 89

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P  P     + +  +     + A   L     NA + N+   + L +  +  +   D  A
Sbjct: 90  PS-PQFEREIGRAQLALGNLNEAQQALT----NASDANKTDDVALNSLGVTRSLLQDFQA 144

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +     ++L +  +S+      A + +   K  ++  IL
Sbjct: 145 ARESFNQALAIKPDSVEYRNNLALAWMLDGKPGQSIRIL 183


>gi|301629652|ref|XP_002943951.1| PREDICTED: TPR repeat-containing protein yfgC-like [Xenopus
           (Silurana) tropicalis]
          Length = 563

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 8/103 (7%)

Query: 198 YVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
               ++W+ A   L   +     + +  R + L+A  L              A++ L   
Sbjct: 395 QAQLRDWAGARRMLEPLRLAVQDDASALRQVRLLAAELALQSD-----QPEAALQYLPAA 449

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299
             +    +  +++L+   +   A   LE  W    HP+ A ++
Sbjct: 450 GGTRPERVLRSQTLVRLGRGGDATGALET-WLAT-HPQDATLW 490


>gi|159029289|emb|CAO90155.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 394

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 21/205 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATREFAV 157
           +  LA +M   +  ++    E ++  L  Q +  E +    A +                
Sbjct: 195 DSTLAGQMAEQLGIEN-KDAESIIDSLIAQFSAQEGKNPETAEDWFH------------- 240

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  E   +G+ ++A     +AL I P              +   +  A+   ++  + 
Sbjct: 241 QGL--EQANLGNWSNAIADWEQALKIDPQLASAWHNRGSALAMIGNYEEALNSYDRALEI 298

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               N ++ I     +L    +     +     + L+  DN   A      +L +  + +
Sbjct: 299 TP--NDHQIINARGSALYGLQRWQ--EALECWQQVLEADDNFYQAWYNRGSTLENLGETQ 354

Query: 278 KAEVILEKIWKVNPHPEIANIYTHL 302
            A    +K   + P  E+A      
Sbjct: 355 AAIACYQKALGIAPDFELAQTRLEA 379


>gi|254473358|ref|ZP_05086755.1| tetratricopeptide repeat domain protein [Pseudovibrio sp. JE062]
 gi|211957474|gb|EEA92677.1| tetratricopeptide repeat domain protein [Pseudovibrio sp. JE062]
          Length = 406

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 51/174 (29%), Gaps = 6/174 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L       A E  + +++       A+Y L     ++     A+ YA + +   P++ 
Sbjct: 95  ALLLLGYLEQAKEAFDAVVEAEPENRNALYGLSTILIKMHVHAEAEPYARRLVQQIPNSA 154

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +            AI       +    ++ +    L+  S     +     +   
Sbjct: 155 AALSLLGDALSAETNAEAAILNYRAALR----FDPHYVPALLGLSKVLIIRKKSEEALAR 210

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             E+  L   ++   +    + + ++    A    E        P+ A    HL
Sbjct: 211 LNEAHDLQPRNVEVLVAMGHAYLLEDSTASAVESFELAHACE--PDNAAALVHL 262


>gi|167573718|ref|ZP_02366592.1| CheR methyltransferase family protein [Burkholderia oklahomensis
           C6786]
          Length = 688

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 4/116 (3%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFE 163
             S  S +          L   +       ++ A + +     L  P+   F +  L  +
Sbjct: 551 AASRASAEPYAGAPPEAPLDAARRLADAGAFDAAQQAVRASIDLSGPSADAFYLLGLIAD 610

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           +   GD  +      KAL + P        +     +A +   A   + + ++ A+
Sbjct: 611 AQGRGDEAT--DCYRKALYLEPSHYEALTHLATLLDIAGDRDGAQWLMQRARRAAQ 664


>gi|167518011|ref|XP_001743346.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778445|gb|EDQ92060.1| predicted protein [Monosiga brevicollis MX1]
          Length = 706

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 3/94 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R GD + A     +AL +S        A    + + +++ RA+  L    +   E    
Sbjct: 494 QRAGDHDKALSLYHRALQLSEHNVEALVAKGTLHTILQQYDRAVDCLKTALRLQPEHVNG 553

Query: 225 RAILLIA---RSLENADKGDMIASYHDAIESLKL 255
           R  L      R     D G  + +  D   +L+L
Sbjct: 554 RRYLETTYFRRGKYLEDCGKYVDAAEDYSAALEL 587


>gi|197122158|ref|YP_002134109.1| serine/threonine protein kinase with TPR repeats [Anaeromyxobacter
           sp. K]
 gi|196172007|gb|ACG72980.1| serine/threonine protein kinase with TPR repeats [Anaeromyxobacter
           sp. K]
          Length = 972

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 55/174 (31%), Gaps = 5/174 (2%)

Query: 98  HNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
                A + H   +++      + E L  L++   A  + + + A E  +  L       
Sbjct: 561 GTRDDAARRHIDAARRGVSRLGNREQL--LVQALAARIDGRLDEARELYDANLAQAGDDL 618

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            A+        R G       Y  K L ++PD P     + + +     W    +  N+ 
Sbjct: 619 EALEGAGDILWRQGKWADCVPYYEKVLALAPDRPDPLAMLTEAFGRLGRWDDLRSLRNRI 678

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
              A    R+ +++ I   L    +    A    A+      +    A+  A  
Sbjct: 679 VARADSPGRSASLVEIHLWLGEPQRALAEARRSLALHGNSQAEFLWFAASAAGD 732


>gi|134054931|emb|CAK36942.1| unnamed protein product [Aspergillus niger]
          Length = 1073

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 52/158 (32%), Gaps = 16/158 (10%)

Query: 160 LYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L+ E+      GD + A     +A+ ++P+       + + ++   E  +A+T L     
Sbjct: 145 LHSEATSAFIDGDYDRAIDLTKRAIQVNPEMFAAHSLLSEIFLAQGEKDKALTALFSGAH 204

Query: 217 NAKE-----WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
              +         R IL  A         D+I  Y   IE   L   +  A    A    
Sbjct: 205 TRPKDPTVWAKVARMILERAGEERQGALNDVIYCYSRIIE---LDPKNYNARFQRAAIYR 261

Query: 272 SQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304
                 +A    E+I K  PH       +A  Y  L  
Sbjct: 262 ELGYNGRAATEYERILKEVPHNARALRHLAETYIDLND 299



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 11/186 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           E   A  +  Y+ A +  +  +Q+      A   L       G+ + A           P
Sbjct: 148 EATSAFIDGDYDRAIDLTKRAIQVNPEMFAAHSLLSEIFLAQGEKDKALTALFSGAHTRP 207

Query: 186 DAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             P  W   A +      +E   A+  +        E +         R+    + G   
Sbjct: 208 KDPTVWAKVARMILERAGEERQGALNDVIYCYSRIIELDPKNYNARFQRAAIYRELGYNG 267

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
            +  +    LK   ++  A    A++ I  N  +KA       W+V+        +T L 
Sbjct: 268 RAATEYERILKEVPHNARALRHLAETYIDLNDVQKAV----DQWRVS-----VKYFTSLE 318

Query: 304 SENTVG 309
            E+   
Sbjct: 319 PEDAPE 324


>gi|158521422|ref|YP_001529292.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158510248|gb|ABW67215.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 708

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 63/214 (29%), Gaps = 26/214 (12%)

Query: 165 CRIGDLNSAQRYATKALDISP-----DAPWVTEAVVQQYVLAKEW-------SRAITFLN 212
            R GD + A    T AL+              E +   Y     +       + A+  + 
Sbjct: 450 ERTGDTDKALALYTVALEKKVHDKRLKKTRTLENMAGIYYQRGNFEKAQNCMAEALALVK 509

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-----ICAA 267
            K ++     R     +    L    + D   +   A + L        A+        A
Sbjct: 510 AKGRDTGLSRRMERYYMFKLCL-IYARTDPSRALDMA-DHLLAEPAVGPATKSRLFALRA 567

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINK 322
           + L++QN    A   L++   +   P+  +++  L       E +        +      
Sbjct: 568 RILLAQNHSNAALAELQQALALA--PDKTDLFLPLGVAFGFLEESKKGEWFFRQYMAGRP 625

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           +S    + +++  L  G    A       +   P
Sbjct: 626 DSGAGWLYLAENRLLAGDTKSARRCMAAFIATRP 659


>gi|115352803|ref|YP_774642.1| hypothetical protein Bamb_2752 [Burkholderia ambifaria AMMD]
 gi|115282791|gb|ABI88308.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           AMMD]
          Length = 545

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 86/261 (32%), Gaps = 31/261 (11%)

Query: 154 EFAVYSLYFESCRIGDLNS-AQRYAT----KALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
             A+     ++   G+ ++ A   A      A+D++     +T A+V +   A   + A 
Sbjct: 15  LLAMLGQAADAHARGEHDAHALWLAAAGHLHAVDMA-ALAQLTSALVARQRAADALALAE 73

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             +         +N    + ++ R  E         +      SL+           A  
Sbjct: 74  CAVRVHPGAGARFNHGYVLQMLGRHAEAVAPYRAAYALDPRWPSLRNN--------LAIA 125

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESV 325
             +S   + +   +L+   + NPH   A    +   L +++  G L  A RL +I  ++ 
Sbjct: 126 LRLSGGDRNEEIALLDAAVEANPHDVQAWINLVVARLAAQDLDGALACAARLAQIAPDNA 185

Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
            +L  ++    E    D A   A  A ++AP    F     I Q    N      W    
Sbjct: 186 LALNNIAMAMKEAQRWDDAERYAARACELAPDDASFRFNLAIIQLVRGNYAA--GWRGHE 243

Query: 386 LH------------AMPDPLW 394
                         A+P P W
Sbjct: 244 ARWDGAGELRGRRPALPGPRW 264


>gi|86360239|ref|YP_472128.1| adenylate cyclase protein [Rhizobium etli CFN 42]
 gi|86284341|gb|ABC93401.1| adenylate cyclase protein [Rhizobium etli CFN 42]
          Length = 624

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 8/164 (4%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPD 186
                     A     + +       E   Y  Y E C   G    A  +  +A++I P 
Sbjct: 429 ALAVAGNRTEAVSAFAQALSLDANCHEANRY--YAEFCVTEGQFELAATHFQRAMEIKPA 486

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR---AILLIARSLENADKGDMI 243
                  +V       +  +A ++     K A+E  R     A +    +   A  G   
Sbjct: 487 DYGAPIMLVNVLRSLGQIDKASSYARIALKRAEEELRLHPENANVACLGATALAFLGVRD 546

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            +      SL    + I     AA +     +  +A  +LE +W
Sbjct: 547 TALEWLARSLATDPDDINIQYNAACTYALLGEIDRAIDLLE-VW 589



 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 80/249 (32%), Gaps = 40/249 (16%)

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAIT 209
           T        Y  + R   L + Q +A  A+++ P     +   AV    + ++    A  
Sbjct: 344 THFLRGREYYHIASRSNHLMARQSFAR-AIELDPGYARAYAGIAVCDARLRSQ--FGAEI 400

Query: 210 FLNQKKKNAKEWNRNRAILLIARSL---ENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            +     N          L  A +      A  G+   +     ++L L  N   A+   
Sbjct: 401 PVEDILANTATALVIDPNLAEAYAAKGFALAVAGNRTEAVSAFAQALSLDANCHEANRYY 460

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH----P-------------EIANIYTHLLSENTVG 309
           A+  +++ +   A    ++  ++ P     P             + A+ Y  +       
Sbjct: 461 AEFCVTEGQFELAATHFQRAMEIKPADYGAPIMLVNVLRSLGQIDKASSYARIA------ 514

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIF 361
            LKRA     ++ E+     + +     +G  D A      ++   P            +
Sbjct: 515 -LKRAEEELRLHPENANVACLGATALAFLGVRDTALEWLARSLATDPDDINIQYNAACTY 573

Query: 362 LLLAQIEQA 370
            LL +I++A
Sbjct: 574 ALLGEIDRA 582


>gi|2506064|dbj|BAA22619.1| stil+ [Schizosaccharomyces pombe]
          Length = 591

 Score = 38.0 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 48/178 (26%), Gaps = 14/178 (7%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A +    +        + L  L              A +  +  L    T +      
Sbjct: 322 EDAIEQGRELRADFKLIAKALGRL--GTTYQKRGDLVKAIDYYQRSLTEHRTPDILSR-- 377

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                 + D   ++    +   I PD    +     +   + +++ AI    +  K A  
Sbjct: 378 ------LKDAEKSKELQDREAYIDPDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPS 431

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             R        R+              D  ++++L  N   A +  A++L       K
Sbjct: 432 DPRG----FGNRAAAYLKVMAPAECIRDCNKAIELDPNFAKAYVRKAQALFMLKDYNK 485


>gi|329851008|ref|ZP_08265765.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
 gi|328839854|gb|EGF89426.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
          Length = 804

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 8/133 (6%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            LY    ++ D ++A +Y  +A+     A  V +      + + + + A   L       
Sbjct: 54  GLY---LKLRDFDAAAQYLARAIAAGNKAAVVYKDYAFALLESGDHAGAEAVLRPHVTKG 110

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
           K+ +     L+    +    +G +  +    + + +    SIM  +          +  K
Sbjct: 111 KDLS-----LMNLMGVTLKRQGRLREALDVLLLAHRKDPRSIMPVVNLGNVYFDLEEAEK 165

Query: 279 AEVILEKIWKVNP 291
           AE +  K  ++ P
Sbjct: 166 AEAMFLKATQLQP 178


>gi|36959074|gb|AAQ87499.1| Adenylate cyclase [Sinorhizobium fredii NGR234]
          Length = 575

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 27/234 (11%)

Query: 169 DLNSAQRYATKALDISPD----APW----VTEAVVQQYVLAKE--WSRAITFLNQKKK-N 217
           D   AQ    +A+ + P       W    + +A V  +   K+  W+  +  L Q    +
Sbjct: 337 DNKQAQALIDRAIALDPAYAHAHAWRACILGQAWVYGWCEDKDAVWAEIVAELEQALALD 396

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             + + +R +     +  + +  ++  + +    +L L  N  +  +   + L    +  
Sbjct: 397 DNDADVHRIL-----AAVSVNNNELTTARYHQERALSLNPNYDLVVVQQGELLTWLGRPE 451

Query: 278 KAEVILEKIWKVNPH-PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +    + K  ++NPH PE     +   +           ++  + L  +  + V+   + 
Sbjct: 452 EGVEWIRKAMRLNPHHPERFWSHLGKAHFAARQY--AEAIEAFMHLSTM--DHVQQAFVA 507

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +     +G    A A       +AP   I   LA +  A    T  I      A
Sbjct: 508 ACYGW-LGDEIAASAHIKKLRALAPDFGIESFLATLHYAQESETQHIREGLVKA 560


>gi|327541891|gb|EGF28400.1| TPR repeat-containing protein [Rhodopirellula baltica WH47]
          Length = 634

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 16/209 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A    +A               +     +         Q + A  + E  +    T    
Sbjct: 422 AGRFEVAAPRAR--DAIELLDGDAESRFILADCLRWTGQIDEAVVEFEKGVSAYPTYFRG 479

Query: 157 V--YSLYFESCRIGDLNSAQRYATKAL----DISPDAPWVTEAVVQ-QYVLAKEWSRAIT 209
           V  Y L      +GD ++A+   + A     +  P   W     +   ++ A ++  A  
Sbjct: 480 VQRYGLLL--LELGDNDAAREMFSIATLGWPETDPRH-WAARFQLSIAHLGACDFESA-- 534

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
             +++ +  +E       ++ A +  +   G+   +     + L    N +   +  A +
Sbjct: 535 --HRELQECREHTPGDMDVVFALAEASVGIGEPEKAIELYEQVLNEFPNDVDTHLNLAHT 592

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI 298
           L+S  +  +A         + P  E A  
Sbjct: 593 LLSTKQTDRAAGHFATALSLAPDNERAQA 621


>gi|262275433|ref|ZP_06053243.1| tPR domain protein putative component of TonB system [Grimontia
           hollisae CIP 101886]
 gi|262220678|gb|EEY71993.1| tPR domain protein putative component of TonB system [Grimontia
           hollisae CIP 101886]
          Length = 404

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 45/143 (31%), Gaps = 21/143 (14%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPA----TREFAVYSLYFES---CRIGDLNSAQR 175
            ++  Q+   +     A   ++ + +       TR         E+    +  +   A  
Sbjct: 253 KVMMAQLYQQQGVPEKAAALMQEVNRADDKPDVTRVV------MEASYWQQAKEWEKAIG 306

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
              +A  +SP   W      Q  +    + +A+T L   ++  K  +   A       L+
Sbjct: 307 AWEQAAHLSPKYYWAAS---QLSLQHGYYQKALTLLENVQQPEKAADIELARTFAYDKLD 363

Query: 236 NADKGDMIASYHDAIESLKLCDN 258
             D      +   A  + +L  +
Sbjct: 364 QID-----QALMHAKRAHELTPS 381


>gi|253999006|ref|YP_003051069.1| hypothetical protein Msip34_1296 [Methylovorus sp. SIP3-4]
 gi|253985685|gb|ACT50542.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 697

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 3/185 (1%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 +Y  A    E  L +        ++L      +G    A     +A+ +SPD  
Sbjct: 155 ACQDAGRYAEAERCYEEALTLAPNDAALHFNLGNARRELGKTAQAAASYQRAIALSPDDA 214

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +   AI    +      +    R  L+  +    AD   +     +
Sbjct: 215 DAHNNLGNALRELGQLPEAIACYQRALALKPDLYHARVHLIHQQQ-HAADWRGLEQQIDE 273

Query: 249 AIESLKLCDNSI--MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               L     +     +  A     +  ++  AE  LE  +           +TH+  EN
Sbjct: 274 VRGWLHSAPTAQISPFAFLAMPGTTAAEQRLCAERWLENRYASLNAQASELAFTHIRHEN 333

Query: 307 TVGKL 311
              ++
Sbjct: 334 KRLRI 338



 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 61/211 (28%), Gaps = 17/211 (8%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY 158
              A ++ +        + + L+         A  + + A +  E  ML  P        
Sbjct: 53  AAEAAELIAQAVALEPRNADMLIN--HGLTLRAAGKRHEALKSYERAMLLTPK-DLVLQN 109

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-------VQQYVLAKEWSRAITFL 211
           +L      +G    A     + L + P    V +A+             A  ++ A    
Sbjct: 110 NLGNLYQELGRFEDAAACYRRVLRVHPGEAEVRDALGHSLLGWGNACQDAGRYAEAERCY 169

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +    A     N A L         + G    +      ++ L  +   A      +L 
Sbjct: 170 EEALTLAP----NDAALHFNLGNARRELGKTAQAAASYQRAIALSPDDADAHNNLGNALR 225

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +  +A    ++   +   P++ +   HL
Sbjct: 226 ELGQLPEAIACYQRALALK--PDLYHARVHL 254


>gi|268317308|ref|YP_003291027.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334842|gb|ACY48639.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 426

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 84/280 (30%), Gaps = 37/280 (13%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            ++Y    +          A       L + +        L     + G L  A   A K
Sbjct: 158 PVIYRQAGRAFFLLDSLEAARRFYMKSLALDSLASETYRWLAELEAQEGHLQKALELAEK 217

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---------------RN 224
           AL  +P          +  +       A+ FL    +                     R 
Sbjct: 218 ALQKAPGDLENIYTFGRLLMQNGYLEDAVHFLQLVVERQPTHRGANYNLGRALMQLGQRE 277

Query: 225 RAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                + R+ +     G +  +  +A +S +      +A+       I   +  +A   L
Sbjct: 278 AGQFFLERARQIQQLSGKIAQARLNAYQSQRARPWQELAA-----LFIQAGQYEEARKAL 332

Query: 284 EKI--WKVNPHPE-IA----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           +    W     P+ +A         LL  +T+  ++R  +L + +    +  + +  +  
Sbjct: 333 DVAIFWA----PDNLALQNDRANLALLLGDTLEAVQRYYQLLQRDSTLADVWLNLGVVLA 388

Query: 337 EMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQIEQANSH 373
           E    + A    + A++  P       +  LA++E+    
Sbjct: 389 EQKQYEAARRAWLQALRYRPHDDTLRRY--LAELERRRGS 426


>gi|196247933|ref|ZP_03146635.1| Tetratricopeptide domain protein [Geobacillus sp. G11MC16]
 gi|196212717|gb|EDY07474.1| Tetratricopeptide domain protein [Geobacillus sp. G11MC16]
          Length = 195

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 16/98 (16%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-----KEWSRAIT----FLNQK 214
             +  +   A++   +AL +      + +AV + ++         W +AI      L   
Sbjct: 69  KLKKENYRKARKLFEEALRL-----DLEDAVCRYHLGHLELYDGRWHKAIRQFQLVLQST 123

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
            KN + ++  RA+   A +      GD   +     E+
Sbjct: 124 SKNLEPYHYIRALCSSAIAYNQL--GDPEKALRLLDEA 159


>gi|326431071|gb|EGD76641.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 753

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 95/345 (27%), Gaps = 79/345 (22%)

Query: 130 ALAERQYNIAHEKLE-MMLQIPAT----------REFAVYSLYFESCRIGDLNSAQRYAT 178
             +E QY+ A    E  +     T              +  L ++  R GD + A  +  
Sbjct: 350 YSSEGQYDKAIHFHEKALAIRVETLGEKHSRTASAYLGL-GLAYQ--RKGDYDKAIHFHE 406

Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRA 226
           K L I         P        +   Y    E+ +AI +  +      K   E + + A
Sbjct: 407 KDLAITAEVLGEKHPSTADTYNNLGIAYRSKGEYGKAIDYYEKALAIRVKALGEKHPSTA 466

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSI------MASICA----AKSLISQNKK 276
                      DKGD   +     ++  L    +       ++        ++  S+ + 
Sbjct: 467 DTYNNLGSAYDDKGDYDKAIAFYEKA--LAITVVVLGEKHPSTATTYNNLGEAYHSKGEY 524

Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHL------LSENTVGKLKRALRL----EEI 320
            KA  + EK   +        HP+ A+   ++        +           L      +
Sbjct: 525 EKAIELYEKALAITVETLGVKHPDTADTCNNIGLLHNDRGDKEQACSYMQQALDVFATSL 584

Query: 321 NKESVESLVIVSKIAL------EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI------- 367
             +   +    ++  L      +      A   A L       ++      Q+       
Sbjct: 585 GPDHPNTR--KAERNLRRIRGDDEPDDGGARTAASLGEDDDDEQQEGDGDDQVQDEAGQQ 642

Query: 368 ------EQANSHNTDKILYWTQSAL--HAMPDPLWI--SDDGYLS 402
                 E         +  W +  +   A   P W    DDG+ +
Sbjct: 643 DAADESEPQERSPQQPLAGWLRKRVRRRAAFRPCWCKLDDDGHFA 687


>gi|254410828|ref|ZP_05024606.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196182183|gb|EDX77169.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 369

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 56/154 (36%), Gaps = 18/154 (11%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              GD+++A +   +A  + P+   V   + +     +++  A+    +      +    
Sbjct: 224 LTQGDIDTALKVFDRAAKLEPNNSQVYLQIGKILQAQEDFVGALKAFQRAVAVQSDLVEA 283

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVIL 283
           +A +           GD++ +  + +E++      I  +   A++  +     K  E I 
Sbjct: 284 QAAI-----------GDILLTEENYLEAIVAYRRLIEIAPQDAQAHYNLGLALKGRERIA 332

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
           E I  V    ++         ++    +K+A  L
Sbjct: 333 EAITAVEKARDL------FRRQDNRDGVKKAESL 360


>gi|169634101|ref|YP_001707837.1| hypothetical protein ABSDF2624 [Acinetobacter baumannii SDF]
 gi|169152893|emb|CAP01931.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii]
          Length = 569

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 34/294 (11%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
           ++ L   +  + ALA      A     ++     +      +L   +    DL +A   A
Sbjct: 44  DQALQQSMVAEFALAYDDIPTALHNYTVLAIKSNSTTIKQRALDV-ALEYNDLQAALNIA 102

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224
           T  +   P        +    +   E+  A   L++  K     +               
Sbjct: 103 THWVVQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 162

Query: 225 RAILLIARSLENADKGDMIASYHDAIES---------------LKLCDNSIMASICAAKS 269
           R +LL A           I +    +E+               L+         +  A  
Sbjct: 163 REVLLTALRSSAEKDNPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANL 222

Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           LI+ + +  A     K    +K N    +A +   +        L++  ++ E N  + E
Sbjct: 223 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIESNPHAEE 282

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378
           +L I    ++++   D+A    +     A  +    + L    E+   + T K 
Sbjct: 283 ALFIAGLTSIDLKQYDKAEQYLVDFRNSAKYQNEAYYYLAINAERKQHYETAKA 336



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321
           A+ L     K+ A  +L++  K  P  PE+  IY  +L         KL K   +L ++ 
Sbjct: 389 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 446

Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
             S   L   +  +AL+   + +A   A  A++ AP +   L
Sbjct: 447 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 488


>gi|219849694|ref|YP_002464127.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
           DSM 9485]
 gi|219543953|gb|ACL25691.1| Tetratricopeptide TPR_4 [Chloroflexus aggregans DSM 9485]
          Length = 710

 Score = 38.0 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 29/90 (32%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L + + AL       A    +  L        A  +L   +   GD  +A R+  +A+ 
Sbjct: 467 LLRQAEQALERGDSRTAAAAAQQALHRDQQSVLARVALVRAALLDGDQPTALRWLDEAIA 526

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
           + P  P+             + + A   L 
Sbjct: 527 VLPAHPYPHLLRGDLLRQQGDLAAARAELT 556


>gi|255659101|ref|ZP_05404510.1| putative lipoprotein [Mitsuokella multacida DSM 20544]
 gi|260848545|gb|EEX68552.1| putative lipoprotein [Mitsuokella multacida DSM 20544]
          Length = 443

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 52/178 (29%), Gaps = 24/178 (13%)

Query: 117 HNEYLVYLLEVQI-----ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
             E L    + Q      A        A +K+  M     +       + +      D  
Sbjct: 259 GQEILYLWQQAQAPDGSDASLA----AAEKKVRQMPDEANSYL--YRGIVY--FNRADYK 310

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A+    +A+ +  D+      +            A+   +   K + E+          
Sbjct: 311 QAESDFRQAVGLKSDSMAAHYNLAITQQREGRHKDALKTYDALLKLSPEF----MQAWYN 366

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           R L   D+     +  D  E+L+L   +  A    A + I Q K        EK W+ 
Sbjct: 367 RGLIALDQKKESEALADFQEALRLTPQTADAKNAQAVAYIRQKKY-------EKAWQA 417


>gi|196231762|ref|ZP_03130619.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196224234|gb|EDY18747.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 873

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 76/228 (33%), Gaps = 11/228 (4%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +IG    +      A+  +P      E +        + + A+  L    ++A E +  
Sbjct: 89  LKIGKPKESAEAFQTAVGFTPANADAWEGLGISLNSLDKINEALEAL----QHAAEADSK 144

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              + + R +          +     ++++L  +S  A        + + K ++A     
Sbjct: 145 SFDICMLRGVTLLRARKTSEARDTLAKAVELDPDSKNAHAILGFVYLQEGKPQEAVAEFG 204

Query: 285 KIWKVNPHPE--IA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           +  K+ P+    +A      L   +  G +         N +++ +   ++    +    
Sbjct: 205 RALKIAPNDSETLANRAIALLAMHDLPGAIAATQGAVAANPDNLAARRNLAAFLAKAQKY 264

Query: 342 DQAHAKAMLAMKIAP-RKEIFLLL--AQIEQANSHNTDKILYWTQSAL 386
           D+   +A   +   P  KE + LL  A I++   +           AL
Sbjct: 265 DETAVEAKALIARQPADKEAWALLGEADIKR-ERYPQGVEEMEKARAL 311


>gi|120602481|ref|YP_966881.1| tetratricopeptide domain-containing protein [Desulfovibrio vulgaris
           DP4]
 gi|120562710|gb|ABM28454.1| Tetratricopeptide domain protein [Desulfovibrio vulgaris DP4]
          Length = 374

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 65/199 (32%), Gaps = 9/199 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D  SA    ++A+   PDA  +  A+   Y L  +  RA+   +         NR RA  
Sbjct: 35  DALSAIEELSRAVRNDPDAVEIYLALGNLYRLRGDIDRAVQIRSSLIVRPGLDNRFRARA 94

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            +    +    G +  +     E+ +L        +  A           A    E+  +
Sbjct: 95  YLELGRDYRRGGFVDRALQAFDEAQRLGAERDAIILELAHLHADSGSFDLAA---EQFGR 151

Query: 289 VNPHPEIANIYTHLLSE-----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           V   P  A+       +          +K   R  ++   S+E+      + +  G   +
Sbjct: 152 VGHKPAQAHYLVRHAEDLCVQGEFAEAVKTLTRAVKVYPGSIEAWTTRIAMHIRSGEWRK 211

Query: 344 AHAKAMLAMKI-APRKEIF 361
           A +    AM+  +P +   
Sbjct: 212 AKSMLREAMQSVSPDRRFL 230


>gi|88812660|ref|ZP_01127907.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231]
 gi|88790076|gb|EAR21196.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231]
          Length = 257

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 2/105 (1%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+ +   A+ +  +A+++ P+         Q      E+ RA     +       +   
Sbjct: 82  ERLDETVQARAHYRRAIELQPNNSSALNNYGQFLCERDEYDRAERLFLRA-AENPTYESP 140

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
           +  L  A      D GD   +    + +LK       A    A+ 
Sbjct: 141 QVPLANAGVCAIQD-GDTKRAEDFFLRALKYEPRFPSALAHMAQL 184


>gi|324503265|gb|ADY41421.1| Tetratricopeptide repeat protein 7B [Ascaris suum]
          Length = 904

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 26/206 (12%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A ++A +   I     W  +  +        W RA   L+Q     K         +
Sbjct: 395 YERAMKFANEDRYI-----W-FQFALTLLC-HGRWVRASRILSQCIAMDKLEENAAVKHM 447

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDN--------SIMASICAAKS-----LISQNKK 276
           +A  +E    G    +   A ++++L +          + A   + K+      + + + 
Sbjct: 448 LAAQIEIEHLGQYDEAISHAEKAIELSEGSWLSGRCHLLHAIAFSLKAEGVVRYVKRKEM 507

Query: 277 R-KAEVILEKIWKVNPHPEIANIYT----HLLSENTVGKLKRALRLEEINKESVESLVIV 331
             +A  + EK  +++PH ++A+ Y      ++ +    +      L E+N E   +L+++
Sbjct: 508 SMQAIDLFEKATQLDPHDDVAHYYCARQYAIVRDIQAAREWCERTL-ELNPEMPSALMLM 566

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357
           + I         A    + A+   P 
Sbjct: 567 ALIFTAQKDYKGALELVVEALNDFPS 592


>gi|320592189|gb|EFX04628.1| peptidyl-prolyl cis-trans isomerase [Grosmannia clavigera kw1407]
          Length = 404

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 16/129 (12%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            A  +  +  A +K             A+  L        DL+SA     +A      + 
Sbjct: 260 TAFKKGDWAAALDKYHK----------ALRYL----NEDPDLDSAPAGTKEAFGQLRISV 305

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A++Q  + +  W+ A        + A      +A  L  R        D   +  D
Sbjct: 306 NTNAALMQLKLSS--WADARVSATSALEVAGITPAEQAKALFRRGQALLKLKDEDGALAD 363

Query: 249 AIESLKLCD 257
              + KL  
Sbjct: 364 LSAAHKLAP 372


>gi|224812381|gb|ACN64819.1| PokR1 [Streptomyces diastatochromogenes]
          Length = 1065

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 72/252 (28%), Gaps = 35/252 (13%)

Query: 93   MSIAAHNIPLARK--MHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQ 148
            M   A     AR   + +    +       L Y L            +  A   LE  L+
Sbjct: 789  MLANAGQPHAARDELLAALDGFRTLGERLGLTYTLSALAESESARGDHVGAIGALEEALR 848

Query: 149  I------PATREFAVYSLYFESCRIGDLNSA----QRYATKA--LDISPDAPWVTEAVVQ 196
                      R   +  L  E  R G   +A       A +A  L +         A+  
Sbjct: 849  AVTELGHAEDRPMLMVRLAVEQARSGRPEAAEAGLLDAAAEASRLGLGETLGVAHHALGD 908

Query: 197  QYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                    + A   L++       +        A+L     L  A+     A+      +
Sbjct: 909  LRRTQGRTAEARRLLDRALAEVMAHGPGVGYRPAVLTSQGHLAVAESRLP-AALEACTAA 967

Query: 253  LKLCDN------SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
            L L              + AA   ++Q + + A V+L     V   P        L ++ 
Sbjct: 968  LDLARQVDEAQLLAQVLVLAADIALAQAEPKHAAVLLHTAADVRGQP--------LDADP 1019

Query: 307  TVGKLKRALRLE 318
             V ++ RA RL 
Sbjct: 1020 DVHRVARATRLA 1031


>gi|158334155|ref|YP_001515327.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158304396|gb|ABW26013.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 566

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 30/290 (10%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYV----SQQHTFHNEYLVYLLEV--QIALAERQYNIA 139
           +AL     ++       A    + V     +    H   L +      + ALA+  + IA
Sbjct: 254 QALAEAGQALGRGESSKAVSKFNQVLGSDRKAVALHGRGLAHYQRGNYKEALADLNHAIA 313

Query: 140 HEKLEMMLQIPATREFAVYSLYFESC--------RIGDLNSAQRYATKALDISPDAPWVT 191
            +    +        F        +         + G   + + ++  AL ++PD     
Sbjct: 314 IDPYNAL-------FFNSRGSVHLAQALQPNRNLQSGASRAERDFSE-ALKLNPDDSNA- 364

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                   LA  +  A T        A   +   A     R      + D+  +  D  +
Sbjct: 365 ---YNNRGLANFYMGARTQAIDDYNQALRLDPGLAKAYKNRGFTRWLEQDIRGALLDLKQ 421

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +L +      A     +    Q +  KA    ++  ++ P      IY  +         
Sbjct: 422 ALTIDPTYAPAYQTRGRLQFRQGEVAKAIADYDQAIQLKPKAGKTYIYRGIARYENSEVP 481

Query: 312 KRALRLEEINKESVE----SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                 +   K S E    + +++    L  G  ++A  K   A ++   
Sbjct: 482 GAIQDWQAAIKASPEESAGAHLLIGATLLTQGRENEALQKLKTAKQLERT 531


>gi|311898592|dbj|BAJ31000.1| putative transcriptional regulator [Kitasatospora setae KM-6054]
          Length = 444

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 67/213 (31%), Gaps = 25/213 (11%)

Query: 97  AHNIPLARKMHSYV-SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---- 151
           + +   A+   +      +   +  L   +  + A        + + +++          
Sbjct: 220 SGDHRAAQYWANRAVDWSNAAGDHDLTIYITARKAQLAGDMRESLDAVDLAESAQRIAPP 279

Query: 152 ----TREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQYV 199
               T   AVY  +  +  +GD  + Q+   +AL++        +    W+  A V+   
Sbjct: 280 RSRLTALGAVYGAHGHAL-LGDELACQQAYDQALELVSVPTETGANRGHWLDAAYVEAQR 338

Query: 200 LA-----KEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                   ++  A+   +Q  +     + R+R + L   +           +   A E+L
Sbjct: 339 ARSLAALGQYDAAVVGFDQAIRALPASFRRDRGVYLARSAGAQLHAIGPERAATTASEAL 398

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            +   S  ++   A+      K      + E  
Sbjct: 399 SIA-TSTGSARIFAELASLDGKLSPWSTVAEVA 430


>gi|291452269|ref|ZP_06591659.1| AAA ATPase [Streptomyces albus J1074]
 gi|291355218|gb|EFE82120.1| AAA ATPase [Streptomyces albus J1074]
          Length = 470

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 56/199 (28%), Gaps = 38/199 (19%)

Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L  ++ R    G+ + A     +A  +SP                ++ S A     +  +
Sbjct: 170 LLRDALRSYDRGEADEALLICHEAQMLSPGYHESWRIEAYIQTGLRDVSSARAAYERANE 229

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
            + E      +  +  S    +  D          + KL    +  ++            
Sbjct: 230 ISPES---ATLCYLYGSFLVNEGVDPGLGLKLLQSAAKLAQ--VPPAVAN---------- 274

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
                  E  W    H ++ +    + S +    LK          +S E  V ++ I +
Sbjct: 275 -------EIAWA---HIQLGDFDAAITSASHAITLK---------PDSYEGSVAMA-IGM 314

Query: 337 EMGSIDQAHAKAMLAMKIA 355
             G  +     A    + A
Sbjct: 315 RAGVYEAEKRVANAQYESA 333


>gi|254247267|ref|ZP_04940588.1| TPR repeat [Burkholderia cenocepacia PC184]
 gi|124872043|gb|EAY63759.1| TPR repeat [Burkholderia cenocepacia PC184]
          Length = 584

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 67/237 (28%), Gaps = 49/237 (20%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A   A  A+ + P A           +  +  + A+            W   R  L 
Sbjct: 98  TADALALAECAVRVQPGAATHFNHGYALQMAGRH-ADAVAPYRAALAIDAGWPSLRNNLA 156

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           IA  L  AD+ + IA       ++K     +                        + W  
Sbjct: 157 IALRLSGADRAEEIALLDA---AVKHDPRDV------------------------QAW-- 187

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                I  +   + + +    L  A RL ++  ++  ++  V+    E    D+A   A 
Sbjct: 188 -----INLVVARIATHDLDAALACAERLADLAPDNALAMNNVAMAMKEAQRWDEAERHAA 242

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH------------AMPDPLW 394
            A ++AP    F     I Q    N      W                  A+P P W
Sbjct: 243 RACELAPDDASFRFNLAIIQLLRGNHAA--GWRGHEARWDGAGELRGRRPALPGPRW 297


>gi|86609622|ref|YP_478384.1| TPR domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558164|gb|ABD03121.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 895

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 28/91 (30%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L   +   A    +  LQ    R  A+Y L   +    D   A  Y  KAL + P   
Sbjct: 284 ALLGSGERERAASAYQAALQFNPQRVEALYCLGRLAVANYDFPKALDYFDKALTLCPHFV 343

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
               A  + Y  + +   A +      +   
Sbjct: 344 ESLLAKAEVYGFSDQLQEAESCARLALQKKP 374


>gi|37520284|ref|NP_923661.1| photosystem I assembly protein Ycf3 [Gloeobacter violaceus PCC
           7421]
 gi|39932495|sp|Q7NMQ0|YCF3_GLOVI RecName: Full=Photosystem I assembly protein ycf3
 gi|35211277|dbj|BAC88656.1| ycf3 [Gloeobacter violaceus PCC 7421]
          Length = 171

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 39/136 (28%), Gaps = 27/136 (19%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +   A A+  Y  A E     L++      R F  Y++       G  + A  Y  KAL+
Sbjct: 41  DGMAAQADGDYAEALEYYNEALKLEEDAYDRSFIHYNIGLIHAANGAHDVALDYYDKALE 100

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +P  P                        Q   N    +  R   +         +   
Sbjct: 101 ENPRLP------------------------QALNNIAVIHHFRGAKVEEEGQPEQAEEHY 136

Query: 243 IASYHDAIESLKLCDN 258
             +    I +++L  +
Sbjct: 137 AKAAAAWIRAVRLAPD 152


>gi|17230575|ref|NP_487123.1| hypothetical protein all3083 [Nostoc sp. PCC 7120]
 gi|17132177|dbj|BAB74782.1| all3083 [Nostoc sp. PCC 7120]
          Length = 422

 Score = 38.0 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 4/125 (3%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E  +  D   A    ++AL ++P         +Q+ +   + S AI           + 
Sbjct: 10  LEKAKQKDYAGAIEEFSRALKLAPYFAEAY---LQRGLAYYD-SGAILLAVSDYTEVIKI 65

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N         R+L      ++  +  D  ++++L  N   A          Q   + A  
Sbjct: 66  NPESVEAYYCRALARLALKNLPGALEDIEQAIRLNINYAAAHSLRGTVQRKQGYIQNAIA 125

Query: 282 ILEKI 286
             +K 
Sbjct: 126 SFKKA 130


>gi|333022959|ref|ZP_08451023.1| hypothetical protein STTU_0463 [Streptomyces sp. Tu6071]
 gi|332742811|gb|EGJ73252.1| hypothetical protein STTU_0463 [Streptomyces sp. Tu6071]
          Length = 148

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/84 (8%), Positives = 26/84 (30%), Gaps = 3/84 (3%)

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A ++       T  ++     L         + +++++       + +A  +    +   
Sbjct: 52  AGMFFDAKEYTTAVRI--LRGLVTEAPGHTAARLLLARAYYHSAQLGRAETELRAILDRD 109

Query: 356 PRKEIFLLLA-QIEQANSHNTDKI 378
           P +    LL  +  +    + +  
Sbjct: 110 PVESYATLLLGRTLERQGRDAEAA 133


>gi|323951317|gb|EGB47192.1| tetratricopeptide [Escherichia coli H252]
          Length = 294

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GMRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|309785490|ref|ZP_07680121.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
 gi|308926610|gb|EFP72086.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
          Length = 261

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 21  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 78

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 79  FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 126


>gi|288960866|ref|YP_003451206.1| TPR repeat-containing protein [Azospirillum sp. B510]
 gi|288913174|dbj|BAI74662.1| TPR repeat-containing protein [Azospirillum sp. B510]
          Length = 974

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 93/355 (26%), Gaps = 66/355 (18%)

Query: 60  AVSRFFLSCPAMLFHMLHKR--NYDKGYKALYTGLM-----SIAAHN--------IPLAR 104
           A+       P  +      R   +    +AL   ++     + +A N          L  
Sbjct: 206 ALLTPLDPAPPRMEAAAQTRLGRHGAAAQALSRVMVLEPADAESAGNLGDSLYDGGRLLP 265

Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
               Y           L             +   A      +          +       
Sbjct: 266 AAAWYGRAARLEPQRILAAFNRGAALRDAGRIGEALAVFRELAGRAPQMAEPLEQCMQLG 325

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV----------------VQQYVLA------- 201
            R+G+   A   A + L +SP        +                +             
Sbjct: 326 QRLGNGEGAMPAARRLLALSPGHAAALRTLCMVETPPIRELRRLVRLDPLAEEVVLTLAG 385

Query: 202 ---KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
                W+ A     +  ++A   +    + L    L  A  G +  +   A  ++++  +
Sbjct: 386 RLYGGWTLA---AERAYRHALVLDPTSGLALSGLGLARATAG-LDGATQAARRAMRVAPD 441

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--------LSENTVGK 310
             + ++ A  +     +   A     +   +   P  A  + ++         +E  +  
Sbjct: 442 DAVLAVNAGSAFQLDLRPDAALSCHRRALALE--PGNAAAWVNVGTLRLDANAAEEAITP 499

Query: 311 LKRALRLEEINKESVESLVIVSKIAL-----EMGSIDQAHAKAMLAMKIAPRKEI 360
           L RA RL +         + ++   L      +G   QA A    A+  AP   +
Sbjct: 500 LNRARRLADP------GQLALAYSNLGVAWMALGLHGQAVASFRAALDRAPDDAV 548


>gi|190572761|ref|YP_001970606.1| hypothetical protein Smlt0713 [Stenotrophomonas maltophilia K279a]
 gi|190010683|emb|CAQ44292.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 939

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 7/171 (4%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----V 281
           A  +  ++    ++GD  A+Y  + E+++L  + +   +    +L    +  +A+     
Sbjct: 35  AYRIAEQAFAAYERGDYPAAYRQSSEAIRLRPDVVRLRLLQIYALQKLGRGAEAQQQARR 94

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGS 340
            L+   K    P +A            G + RA   + + N      L   +  A + G 
Sbjct: 95  ALDAGLKDPALPALAAAPRTRRGAARTGAVPRAPATVTDRNSRQAYMLATEAYAAYDAGQ 154

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSALHAM 389
           +  A +KA  A +  P++  + LL  A +E             T   L A 
Sbjct: 155 MGVAASKAEQAFRQQPQQGAWALLWVAALEAQQQPGQADAAIGTALQLGAP 205



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 11/106 (10%)

Query: 164 SCRIGDLNSAQRYATKALDISPDA-PWV--TEAVVQQYVLAKEWSRAITF--------LN 212
           +   G +  A   A +A    P    W     A ++      +   AI          + 
Sbjct: 149 AYDAGQMGVAASKAEQAFRQQPQQGAWALLWVAALEAQQQPGQADAAIGTALQLGAPNVE 208

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           + +       R RA+LL  ++ ++   G+  A+   A  +++L  +
Sbjct: 209 ELRARRVALGRQRALLLAQQAYQSLSAGENAAAIEQAHAAVELAPD 254


>gi|189218643|ref|YP_001939284.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
 gi|189185501|gb|ACD82686.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
          Length = 294

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 7/126 (5%)

Query: 134 RQYNIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           ++Y+ A E  +  ++   +       +   Y E   +GD  SA     KA+ + PD P  
Sbjct: 156 KRYSKAIEAFKRAIEEYPSFARAWSNLGGCYIE---LGDYRSAINALEKAISLRPDLPEA 212

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDA 249
              +   Y   KE+ +AI  L +  K   ++      +  +   L N +K          
Sbjct: 213 WCNLGSAYGEIKEYKKAIDSLQRATKIKADYLEAWYNLSRLYGLLHNLEKKTEAEGKIQE 272

Query: 250 IESLKL 255
           I + +L
Sbjct: 273 IIAKRL 278



 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 57/201 (28%), Gaps = 20/201 (9%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             K+W   I       +         A       L     G    +  +  ++L+L ++ 
Sbjct: 86  KNKDWKGLIGLSKNWSREFP----QEAAPHFFLGLAYESLGRYRKATGEYKKALRLKEDF 141

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRA 314
             A        +   +  KA    ++   +  +P  A  +++L        +    +   
Sbjct: 142 PKAWCNLGSCYVYLKRYSKAIEAFKRA--IEEYPSFARAWSNLGGCYIELGDYRSAINAL 199

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQ 366
            +   +  +  E+   +     E+    +A      A KI             ++ LL  
Sbjct: 200 EKAISLRPDLPEAWCNLGSAYGEIKEYKKAIDSLQRATKIKADYLEAWYNLSRLYGLLHN 259

Query: 367 IEQANSHNTDKILYWTQSALH 387
           +E+       KI       L 
Sbjct: 260 LEKKTEA-EGKIQEIIAKRLR 279


>gi|169605775|ref|XP_001796308.1| hypothetical protein SNOG_05914 [Phaeosphaeria nodorum SN15]
 gi|160706839|gb|EAT86978.2| hypothetical protein SNOG_05914 [Phaeosphaeria nodorum SN15]
          Length = 1609

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 40/104 (38%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL    A A   Y  A +  + +L +      A+ +L      +     A+ Y  +A+ +
Sbjct: 523 LLGGCFAYALGDYQKAQDWYKHILTLDKNHVEAISNLAATLLALQRKREAESYWRQAVQL 582

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            P      E ++      +    A+  +++ +++ +   +  A+
Sbjct: 583 RPSYFEAVEHLIGLLCSDQRAKEAVLVIDEVERSLRFVKKADAL 626


>gi|159026310|emb|CAO88886.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 173

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 27/144 (18%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHE-KLEMML--QIPATREFAVYSLYFESCRIGDLNSAQ 174
            E  VY  +   A A+ +Y  A +   E +   + P  R + +Y++       G+   A 
Sbjct: 33  KEAFVYYRDGMSAQADGEYAEALDNYYEALTLEEDPNDRSYILYNIGIIHASNGEHEKAL 92

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
            Y  +A+ ++P  P     +   Y              + +++ ++          A +L
Sbjct: 93  EYYEEAIRLNPRMPSALNNIAVIYHFQG---------EKAREDGQQAE--------AEAL 135

Query: 235 ENADKGDMIASYHDAIESLKLCDN 258
                     +     ++++L  N
Sbjct: 136 -------YDKAAEYWKQAIRLAPN 152


>gi|149186272|ref|ZP_01864586.1| TPR domain protein [Erythrobacter sp. SD-21]
 gi|148830303|gb|EDL48740.1| TPR domain protein [Erythrobacter sp. SD-21]
          Length = 556

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 8/232 (3%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           +    A        A    +  L +      A++     +        A  +  +AL + 
Sbjct: 111 IRANAARQNGDIEGAASSYDRCLTLQPDHPRALHGRARVALVR-AEEEAPAFFERALAVV 169

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    +     Q    A     A     Q  K A  W    A+ L+A+    A +  + A
Sbjct: 170 PSDADLWLGKAQALDAAGRLEEARDLTAQLLKQAPHW--VDALNLMAQLKAAAGEAHVDA 227

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
            ++   E+ +    +    +   + L  + +  +A ++  +  +  P  E     +H  +
Sbjct: 228 HFY---EAARRQPGASAIPVAHIRHLALREEYAEAALVAAEAARRFPEDEF-FALSHASN 283

Query: 305 ENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               G L++A  L  ++++ + E  +   +  L  G +D+A    + A   A
Sbjct: 284 TGMAGDLEQADTLFSQLSQNTPERALQEGRHRLRRGDLDEAERLLLDAASHA 335


>gi|332837874|ref|XP_522199.3| PREDICTED: tetratricopeptide repeat protein 36-like [Pan
           troglodytes]
          Length = 206

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 11/141 (7%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            Q+  ++   +  +   +   GDL++A     +A+ + P+         Q   L  + + 
Sbjct: 46  AQLEQSKALELQGVM--AAEAGDLSTALERFGQAICLLPERASAYNNRAQARRLQGDVAG 103

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI------ 260
           A+  L +  + +    R      + R L    +G    +  D   + +L           
Sbjct: 104 ALEDLERAVELSGGRGRAARQSFVQRGLLARLQGRDDDARRDFERAARLGSPFARRQLVL 163

Query: 261 --MASICAAKSLIS-QNKKRK 278
               +    + L     + R+
Sbjct: 164 LNPYAALCNRMLADMMGQLRR 184


>gi|296166398|ref|ZP_06848831.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898243|gb|EFG77816.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 3581

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 53/147 (36%), Gaps = 11/147 (7%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   GD+  A     +AL +    P + +   +       W      L          
Sbjct: 115 RDAAAAGDIGQALARFEEALTLWRGLPELPDGR-RGTSEKTRWIEGHAAL--------VE 165

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R  A+L   R+ E   + +   +     E  +     ++A   A +   +    ++A  
Sbjct: 166 DRADALLATGRAAEIVGELEAAVAEAPLRE--RRWGQLMLALYRAGRQGEALGAYQRARA 223

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTV 308
           +L     V+P P++  +   ++++++ 
Sbjct: 224 LLADELGVDPGPDLRRLEAAIVAQDSA 250


>gi|290957232|ref|YP_003488414.1| transcriptional regulator [Streptomyces scabiei 87.22]
 gi|260646758|emb|CBG69855.1| putative transcriptional regulatory protein [Streptomyces scabiei
           87.22]
          Length = 1028

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 64/222 (28%), Gaps = 25/222 (11%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140
            ++ + A+  G           A  +   +  +H   +  L+  ++   AL         
Sbjct: 452 RERVHAAVALGTALARRGEARAAVDVLRGLRDEHLTGHPDLIRTVQTASALLADHDQGVR 511

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-------KALDISPDAPWVTEA 193
           +++   L+  A R   +     ++  +    +A   +        +AL   P  P     
Sbjct: 512 QEVYRWLRETAERSPHLVGTAGQALLVRYEATAGLISAASAMHRVRALLARPAEPLSEVF 571

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI-------------LLIARSLENADKG 240
           ++       +W+  +    +         R   +             +  AR        
Sbjct: 572 LLGTAAAVAQWADQLEEAERLVDRGLSGQRTSLLHPMHLALLNVRIDIAAARGAHAEVLA 631

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           D   +      ++     S  A   A  +L+   + ++A  +
Sbjct: 632 DPEVAR-----AVAGGPESANALAHAVVALVETGRTQEAARL 668


>gi|260428757|ref|ZP_05782734.1| TPR domain protein [Citreicella sp. SE45]
 gi|260419380|gb|EEX12633.1| TPR domain protein [Citreicella sp. SE45]
          Length = 574

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 74/218 (33%), Gaps = 7/218 (3%)

Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171
            ++   +     L+   +  +  QY++A +  + + +  A    A           G  +
Sbjct: 287 AEYLRPDHSGAILMSANLLESLGQYDLAVDTFKRVPRDDADYFSAELGRAEALRSDGKPD 346

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A     +    + +   V  A+       + + +A+   +       E +  +  L  A
Sbjct: 347 AAVEVLEQLAQTNGNQISVQSALGDMMRQLERYDQAVAAYDAAISGFVEEHPAQWFLYYA 406

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVN 290
           R +      D  A+  D  ++L+L             SL+  + K  +A  ++E+     
Sbjct: 407 RGIAKERLKDWQAAEADFRKALELNPGQPQVLNYLGYSLVEHHAKLDEALSMIEQAVATE 466

Query: 291 PHPEI------ANIYTHLLSENTVGKLKRALRLEEINK 322
           P            +Y     E+ V  ++RA  L  ++ 
Sbjct: 467 PQSGYIVDSLGWALYRLGRYEDAVAHMERAAELMPVDP 504


>gi|86607679|ref|YP_476441.1| TPR domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556221|gb|ABD01178.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 274

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 61/207 (29%), Gaps = 21/207 (10%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L  Q            +   ++L+       A+  L     ++ +   A     K +
Sbjct: 51  TEQLRAQA-----------DGYRVVLEREPDNPIALRGLIDTQLQLNEPQGAIEPLKKLV 99

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           ++ P+   +   + +      ++  A+  L          +R     L+   L      +
Sbjct: 100 ELEPENRQLRAFLAEIQQDTGDFEGALEQLQI-LYEGDPKDRQVLQQLVDVQLTLGRTSE 158

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANI 298
            IA     +E     ++     +  A      N+  KA V+ +K+   +P    P +   
Sbjct: 159 AIALLEKHLEEAPEDNDVR---LRLAFVYARNNQTEKAVVLYDKLIAADPSDFTPVLGKA 215

Query: 299 YTHLLSENTVGKLKR---ALRLEEINK 322
                + +   + K      +   +  
Sbjct: 216 IALSSATDENLRAKAPELFEQAARLAP 242


>gi|83859902|ref|ZP_00953422.1| hypothetical protein OA2633_07874 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852261|gb|EAP90115.1| hypothetical protein OA2633_07874 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 191

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E+   GD+++A R       + PD         +  + A +W  A+  LNQ      +  
Sbjct: 80  EARERGDIDTAWRSYDHLRALEPDYAEGWVVSAELAMQASDWEFALEALNQAV--TLDER 137

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           R  A  L+ R+LE A       +   A+E+ +           A  +L    +
Sbjct: 138 RFDAWALLGRALEQA------QAREAAMEAYREAVLLYPLHPAAGPALARLER 184


>gi|325203787|gb|ADY99240.1| IgA-specific serine endopeptidase [Neisseria meningitidis M01-240355]
          Length = 1777

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%)

Query: 68   CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127
             P         R   +G++++    + IA     LAR+                      
Sbjct: 1164 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1208

Query: 128  QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184
               L  +Q   A  + + +                E+ R     + ++ A  KA ++S  
Sbjct: 1209 -AELLAKQRAEAEREAQALAAHRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1260

Query: 185  --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
                A     A  QQ  LA++   A        K   E  R  A L   +          
Sbjct: 1261 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1319

Query: 243  IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
              +   A  + +       A+  +AK     +  R+A    ++  +   H + A      
Sbjct: 1320 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1371

Query: 303  LSENTVGKLKRALR 316
               +   + KR   
Sbjct: 1372 ---SQPQRRKRRAA 1382


>gi|320165966|gb|EFW42865.1| phosphoprotein [Capsaspora owczarzaki ATCC 30864]
          Length = 1153

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             ++         A      ++Q   T       L   +   G + +A  +  +   I P
Sbjct: 557 RARLLEDMNNPADAEVIYRELIQEHPTLIDCYLRLAAIAKNQGRIAAAAEWVREVFAIQP 616

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
             P     V   ++   EW+ A        KN  + N+     LIA           ++ 
Sbjct: 617 HNPDAWCFVGNMHLSRYEWNLAQNKFEMLLKNNGKTNKVDPYPLIALGNIFQQSAQPVSV 676

Query: 246 YHDAIE 251
               ++
Sbjct: 677 PKAQMD 682



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
           L     +  + +  +AI       ++    D   ++    ++ +L D+  +      +  
Sbjct: 337 LALSALHRSDVDEIKAISCYLIGRKHHAAEDYDQAFQFYYQANRLWDSFALPQFGLGQLY 396

Query: 271 ISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR-ALRLEEINKES 324
           I +    KA   LEK+    P        + ++Y      N   + ++   ++     + 
Sbjct: 397 IKKGDIAKAAEYLEKVLVKFPDNYEASKILGSLYVTSQYSNKRQRAQQLLHKITVAQPKD 456

Query: 325 VESLVIVSK--------IALEMGSIDQAHAKAMLAMKIAP 356
           VE+ + +++         ALE      A       +KIAP
Sbjct: 457 VEAWIELAQLQEQTDFAAALEAYE-TAARLLLEADIKIAP 495


>gi|304382473|ref|ZP_07364970.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
 gi|304336385|gb|EFM02624.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
          Length = 727

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 292 HPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           HPE      Y  +   N    +    +      ++ +SL  +++        D A     
Sbjct: 511 HPEWNRLQAYCDMTEGNYRAAVNHYEKAYRTTADNPQSLSQLARACFLAEDFDAACRHYE 570

Query: 350 LAMKIAPRKEIFL 362
              ++ P+++ + 
Sbjct: 571 TLHRLFPQEKRYT 583


>gi|260436698|ref|ZP_05790668.1| TPR repeat-containing protein [Synechococcus sp. WH 8109]
 gi|260414572|gb|EEX07868.1| TPR repeat-containing protein [Synechococcus sp. WH 8109]
          Length = 400

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 10/192 (5%)

Query: 163 ESCRIGDLNSAQRYATKA-LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AK 219
           E     D     R A +A L   P  P+ +  +    +   +   AI  L    K   + 
Sbjct: 174 EMLAGSDKADRLRQAMEADLQERPGDPYASAKLGGLLISEGKNEDAIPLLENGLKQCGSA 233

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              R   +L +  +L  +D    +  Y  A+E       S+ A +  A  L+ Q    +A
Sbjct: 234 GAERYELLLHLGLALTPSDPDKAVNCYRQALEIPLNTRVSLGARLNLAARLMDQGNLEEA 293

Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334
             + +     +  PE+A  + +L        +    L+   R   ++  + E     +  
Sbjct: 294 ISLTQTA--AHRAPEVALAWYNLGLMQRRRGDLAAALEAYGRALALDPNNAECHQNNAVA 351

Query: 335 ALEMGSIDQAHA 346
            L  G+ID A  
Sbjct: 352 QLLGGNIDAART 363


>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
 gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
          Length = 557

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 37/133 (27%), Gaps = 11/133 (8%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           +      +  F       ++         +         +  + M +          +L 
Sbjct: 165 LGRVADARRVFDEMPSTNVVLGNTMVACYVRAGDVEAGRDVFDRMAERDPISW---NTLM 221

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKE 220
               R G+   A+    +  D + +       V+        W+ A+   N+ +    + 
Sbjct: 222 MGYLRQGEAGVARDLFEEMPDRNVN---SWNMVIAACSQEGLWADAVEVFNRMRLARFQP 278

Query: 221 WNRNRAILLIARS 233
                A+L+ A +
Sbjct: 279 DPATMAVLMSACA 291


>gi|209519347|ref|ZP_03268146.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
 gi|209500231|gb|EEA00288.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
          Length = 391

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 40/264 (15%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+               
Sbjct: 84  GETDRAIRVHQNLLSRADLPVNERDHALYELGQDFLKAGLLDRAEETFRSLQSGDYALG- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W  +I      +       ++  A      + E   +     +   
Sbjct: 143 AQRALLTIYEIEKDWVESIDTARHLETMGAASLDKEIAQFHCELAQEALQQKKPDEARRQ 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305
              +LK    ++ A+I       S      A     ++ + NP       Y  L++E   
Sbjct: 203 LGLALKANPTNVRATILFGDVDASGGAPEAAIAQWRRVEEQNP------AYLPLVAEKIM 256

Query: 306 NTVGKLKRALR----LEEINKESVESLVI------VSKIALEMGSIDQAHAK-------- 347
                L RA      L         + ++      V+ +     +   A ++        
Sbjct: 257 KAYEALGRAQEGADLLTTWVDRHPSNDLLDVAYQHVASLRGADAAHALARSQMQKSPNLA 316

Query: 348 -------AMLAMKIAPRKEIFLLL 364
                  A  A+   PR+    L+
Sbjct: 317 GMTRLLEAQQAVAEEPRRSELELM 340



 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTD 376
             ++KE  +    +++ AL+    D+A  +  LA+K  P      +L   ++ +      
Sbjct: 173 ASLDKEIAQFHCELAQEALQQKKPDEARRQLGLALKANPTNVRATILFGDVDASGGAPEA 232

Query: 377 KILYW 381
            I  W
Sbjct: 233 AIAQW 237


>gi|78223041|ref|YP_384788.1| hypothetical protein Gmet_1834 [Geobacter metallireducens GS-15]
 gi|78194296|gb|ABB32063.1| hypothetical protein Gmet_1834 [Geobacter metallireducens GS-15]
          Length = 339

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A        A +  E +L    +    +Y L   S + GD    +    +AL ++   P 
Sbjct: 184 AAHGGDQMTAEKVFERLLASGESDIL-LYELAILSHQGGDGRRCETLLRRALALNDTNPL 242

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ 213
              ++VQ       ++ A+  L +
Sbjct: 243 CNLSLVQLLTENGRFTEAVPLLER 266


>gi|47227439|emb|CAG04587.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 553

 Score = 38.0 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 61/212 (28%), Gaps = 41/212 (19%)

Query: 84  GYKALYTGLMSIA--------AHNIPLARKMHSYVSQQHTFHN-----EYLVY------- 123
           G K L  G ++ A          +       +   +              L         
Sbjct: 45  GRKLLAAGQLAEALSHYHSAVEGDAKNYLTFYKRAAVFLAMGKSKSALPDLTRAIQLKPD 104

Query: 124 LLEVQ-----IALAERQYNIAHEKL----EMMLQIPATR--------EFAVYSLYFESCR 166
            L  +     I L +     A E      +        +           +      +  
Sbjct: 105 FLAARLQRGNILLKQGNTQEAREDFNEVLQRSADNEEAQQQLMKTHELVGLQEEAHAAYH 164

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GD ++      + ++ISP  P V E   + Y+   +  +AI  L      A+  N NRA
Sbjct: 165 QGDYSTTISVLERVIEISPWDPDVRELRAECYIRMGDPQKAIQDL---APTARLRNDNRA 221

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDN 258
             L    L  A  G+   S  +  E LKL  +
Sbjct: 222 AFLKLSMLHYAL-GEHHESLSNIRECLKLDQD 252


>gi|309356703|emb|CAP36809.2| hypothetical protein CBG_19592 [Caenorhabditis briggsae AF16]
          Length = 649

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 60/203 (29%), Gaps = 37/203 (18%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD   A + A K +   P   +  +  +   +   +W+ A+  + +   +      
Sbjct: 19  ADTSGDYQKALQAANKLIRKYPKETFAFKCKLVAQIQLSQWADALELIRKTPAHQMGHVG 78

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                +  R  E  +    + +            + I A    A+    Q   + A  I 
Sbjct: 79  FEKAYIHYRQGELDEAVKELNTCEK---------DDIRAQELKAQIYYKQENFKDAYDI- 128

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE--------------EINKESVESLV 329
                         +Y      +   +L+RA  L               E  ++S   L 
Sbjct: 129 -------------YLYLLKNHSDDSDELRRANYLAVQARLEAQGTKQQVEDAEDSYSQLY 175

Query: 330 IVSKIALEMGSIDQAHAKAMLAM 352
             + + +E   + QA A    A+
Sbjct: 176 NKACVEIEAEKLPQALASLEKAL 198


>gi|331684812|ref|ZP_08385404.1| lipoprotein NlpI [Escherichia coli H299]
 gi|331078427|gb|EGI49633.1| lipoprotein NlpI [Escherichia coli H299]
          Length = 294

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|322434639|ref|YP_004216851.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321162366|gb|ADW68071.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 680

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 21/201 (10%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAI 227
             +A     + L+ +PD     + +   Y  +  +  A+  +N+  +  +  E+   RA 
Sbjct: 180 TEAAILQLRRVLEETPDRSEALQLLAWAYYKSHRYEEALAEINRAIRRVDKPEYRSIRAC 239

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKI 286
           +L  R +   D+  ++A+     E L                 L        A    +  
Sbjct: 240 ILTERGIREGDRSSVVAARQIFEELLSSGPIHTWHIFYNLGNVLGELGDHDAAIARYKLA 299

Query: 287 ----------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS-KIA 335
                     WK      +A+ Y H+       +++   +   ++ +  E+L+  +  + 
Sbjct: 300 IELDENQPVIWKN-----LASAYHHVGQHT--QEMECFDKALALDPKQPEALISKATSLI 352

Query: 336 LEMGSIDQAHAKAMLAMKIAP 356
           L+    ++A     LA ++ P
Sbjct: 353 LDFDKPEEAVPLLELAFRMNP 373


>gi|296446800|ref|ZP_06888738.1| Tetratricopeptide TPR_4 [Methylosinus trichosporium OB3b]
 gi|296255675|gb|EFH02764.1| Tetratricopeptide TPR_4 [Methylosinus trichosporium OB3b]
          Length = 821

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 60/210 (28%), Gaps = 27/210 (12%)

Query: 134 RQYNIAHEKLEMMLQ------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
             +  A    E +++       P     ++ SL  E+ R+G+      +  +A+ I+P+ 
Sbjct: 282 GNHVRARAFAEQLVKWQLGNGKPVFAAKSLCSLAQEARRLGNPILQLEWVERAIQIAPED 341

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W        Y     ++ A                   I  +  +    ++   +    
Sbjct: 342 AWAHGQAGDVYFSQYRFNDADREYKAAISWGSVRRGKNGIAKVLAATGYLEEA--LNLSE 399

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
             ++          +    ++ L    +   A    E+     P             + +
Sbjct: 400 KIVQEHADDPEIPGSWALQSEILRKMGRLEDALSSYEEAITRFP-------------DQS 446

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALE 337
           V +  RA  L ++      S    +  A +
Sbjct: 447 VLRCGRAAVLTDM------SRYAEALEAYD 470


>gi|316932807|ref|YP_004107789.1| TPR repeat-containing protein [Rhodopseudomonas palustris DX-1]
 gi|315600521|gb|ADU43056.1| TPR repeat-containing protein [Rhodopseudomonas palustris DX-1]
          Length = 715

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 90/269 (33%), Gaps = 22/269 (8%)

Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177
            E +V L+  ++     Q + A    + +L+       A++       + G+L    R  
Sbjct: 19  YEPVVLLMRARVLHQHGQLDEARSAYKKVLKKAPDNFTALHFYALAEYQSGNLEIGIRSL 78

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---RAILLIARSL 234
            +AL I P +      +    + +  ++ A+   ++              R I L + + 
Sbjct: 79  KRALLIEPGSAQAHSDMGIMLIASARFAEAVAACDKALALDPALALAYANRGIALASLAR 138

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                     +      S++L      +      +L    +  +A     +  +++P  +
Sbjct: 139 H-------AEAIESFDRSIELLPGRTDSWNDRGNALHKLGRYDEALASYARAIEIDPLND 191

Query: 295 I-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           I     A  +  L   +    L    R   I K  VE+ +  ++  L M ++  A A   
Sbjct: 192 IAFINRATTFKELKQFDQA--LACYDRALSIGKRPVEAGIARAETLLFMKNVKDALATCT 249

Query: 350 LAMKIAP-RKEIFLL----LAQIEQANSH 373
             +++ P       L    +A +  A + 
Sbjct: 250 AVLQVEPNSVPALTLLGNCMAALGDAETA 278


>gi|195438705|ref|XP_002067273.1| GK16333 [Drosophila willistoni]
 gi|194163358|gb|EDW78259.1| GK16333 [Drosophila willistoni]
          Length = 693

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 14/190 (7%)

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIAR 232
            + +  +P         ++      +  +      +   N    N     R    L I  
Sbjct: 315 EQEVAANPTNYDAWFDYLRLIEAEGDADQIRETYERAIANVPPANEKNFWRRYIYLWINY 374

Query: 233 SL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +L E  +  D+  +       L L            +  A+  I   + + A   L    
Sbjct: 375 ALYEELEAEDLERTRQIYKTCLDLIPHKQFTFSKIWLLYAQFEIRSKQLQLARKTLGMAI 434

Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
            + P  ++   Y  L     E    +L    +  E   E+  + +  +++   +G  ++A
Sbjct: 435 GMCPRDKLFRGYIDLEIQLREFERCRL-LYEKFLEFGPENCVTWMKFAELENLLGDTERA 493

Query: 345 HAKAMLAMKI 354
            A   LA++ 
Sbjct: 494 RAIFELAVQQ 503


>gi|169404570|pdb|2PL2|A Chain A, Crystal Structure Of Ttc0263: A Thermophilic Tpr Protein
           In Thermus Thermophilus Hb27
 gi|169404571|pdb|2PL2|B Chain B, Crystal Structure Of Ttc0263: A Thermophilic Tpr Protein
           In Thermus Thermophilus Hb27
          Length = 217

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 67/204 (32%), Gaps = 39/204 (19%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +   +G  ++A     +AL  +P  P     + +  +     + A+           
Sbjct: 11  LGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTP 70

Query: 220 EW-----NRNRAILLIARSLENADKGD--MIASYHDAIESLKLCDNSIMASICAAKSLIS 272
            +       + A + + R  E+ ++G   +  +     ++ ++        +        
Sbjct: 71  RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL 130

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             ++ KAE  L++   +                                 ++ E    ++
Sbjct: 131 LGERDKAEASLKQALALE--------------------------------DTPEIRSALA 158

Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356
           ++ L MG +D+A A+   A++ AP
Sbjct: 159 ELYLSMGRLDEALAQYAKALEQAP 182


>gi|134101841|ref|YP_001107502.1| multidomain-containing protein family [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291009554|ref|ZP_06567527.1| multidomain-containing protein family [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133914464|emb|CAM04577.1| multi-domain regulatory protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 1057

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 10/104 (9%)

Query: 89  YTGLMSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLE 144
             G+++    +   AR++HS      +       + Y L    + AL    + +A E  E
Sbjct: 823 ARGVLAETFGDHERARRLHSEGLHKARELELWPEVSYQLTWLGRNALLTGDHALAREHHE 882

Query: 145 MMLQIPATR------EFAVYSLYFESCRIGDLNSAQRYATKALD 182
              +I   R       +AV  L   + R GDL+ A+ +  + L 
Sbjct: 883 RAAEIARDRGFRAGELYAVTGLALGARREGDLDLAEHHLDEVLR 926


>gi|154252754|ref|YP_001413578.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
 gi|154156704|gb|ABS63921.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
          Length = 598

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 40/146 (27%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-----------------LEVQIALA 132
            G+ ++ A ++  AR     ++   +  +E L  L                 L  +I   
Sbjct: 436 QGVAAVRAGDLAAARTEADAIAALRS--DEALAPLAAANVPAGNILLLSETVLRARIDQR 493

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFES---------------CRIGDLNSAQRYA 177
           E   + A  KLE  L +       +  +Y E                   GD ++A    
Sbjct: 494 EGALDAARAKLEEALALQD----GL--IYSEPPYWYYPVEQTLGAVLLEAGDADAAVARF 547

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKE 203
             AL   P+  W    +++    A +
Sbjct: 548 RAALVRHPNNAWSLYGLMKAQEAAGD 573


>gi|170728958|ref|YP_001762984.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908]
 gi|169814305|gb|ACA88889.1| Tetratricopeptide TPR_2 repeat protein [Shewanella woodyi ATCC
           51908]
          Length = 311

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 32/109 (29%), Gaps = 6/109 (5%)

Query: 156 AVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           A+Y L       +      A +    AL+++P+   V        +   +   A  F   
Sbjct: 109 AMYHLLKSRIFFQQNKYQEALKTIKHALELAPNNCDVLTEYGDILLQLGKVDEAAEFYQN 168

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
             +            LI        K  +  +   AI +L+   +   A
Sbjct: 169 ALQRGP----QNINGLIGMGTVLLKKNQVQEAREHAIWALQQAPDYAPA 213


>gi|83312159|ref|YP_422423.1| TPR repeat-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82947000|dbj|BAE51864.1| FOG: TPR repeat [Magnetospirillum magneticum AMB-1]
          Length = 581

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 7/102 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R+G L+ A+  A +A++++P       A+       + +S A   L    +   
Sbjct: 32  LAVMRVRLGGLDGAKACAERAVELAPGLAEAHAALGLVQGRLRRFSEARLSLEHAVRINP 91

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
                 A L +   L              A E+L+     + 
Sbjct: 92  RLG--MAWLHLGEVLSTF-----PDQLQAAAEALRRAGGLMP 126


>gi|88705690|ref|ZP_01103400.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88700203|gb|EAQ97312.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 330

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 4/89 (4%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATRE 154
            A +   A +     ++     +  L      + A     Y  A +    +      T  
Sbjct: 225 FAEDYAKANRYLRRAAELGYEPSRSLEG--AAEAAYRHGNYGEAQDLYRRLYDDGQRTTS 282

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDI 183
             + +L   + R GD   A     + L +
Sbjct: 283 LCL-NLANLAVRSGDKPRAASLLEECLAL 310


>gi|187731799|ref|YP_001881920.1| lipoprotein NlpI [Shigella boydii CDC 3083-94]
 gi|187428791|gb|ACD08065.1| lipoprotein NlpI [Shigella boydii CDC 3083-94]
          Length = 294

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|218295265|ref|ZP_03496101.1| histidine kinase [Thermus aquaticus Y51MC23]
 gi|218244468|gb|EED10993.1| histidine kinase [Thermus aquaticus Y51MC23]
          Length = 722

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
            A  +L +      +     A  +   +     +G    +     ++L L  +S    + 
Sbjct: 561 GAEAYLRRAVAAFPD----DAEAIGELAFALYLQGRHAEAKPLYEKALALL-DSPDIRVR 615

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE----IN 321
            A+ L    +  +AE    ++   +P   +   +        +G+ K A  L      + 
Sbjct: 616 YARLLYHMGRYGEAEAGYRQVLAQDPG-NLDARWGLAEVVLALGRAKEAELLARGVLAVK 674

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
            +       ++K  LE G  ++A       ++  P 
Sbjct: 675 PDYPLGRFTLAKALLEQGKKEEARRLLREELRANPD 710



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 36/126 (28%), Gaps = 1/126 (0%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A     Y        +   + +   ++     +Y  A      +L        A + 
Sbjct: 591 GRHAEAKPLYEKALALLDSPD-IRVRYARLLYHMGRYGEAEAGYRQVLAQDPGNLDARWG 649

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L      +G    A+  A   L + PD P     + +  +   +   A   L ++ +   
Sbjct: 650 LAEVVLALGRAKEAELLARGVLAVKPDYPLGRFTLAKALLEQGKKEEARRLLREELRANP 709

Query: 220 EWNRNR 225
           +    R
Sbjct: 710 DPEVER 715



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 88/320 (27%), Gaps = 29/320 (9%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134
            L     ++G  +LY G +++    +            +    +  LV            
Sbjct: 419 HLRLSREERGRVSLYRGRVALGVEALSGGEGAVLGTGVRRKLLSAPLVR----AAYGPSG 474

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
                      +                E      +  + + A      +P A  V++  
Sbjct: 475 -----EVVFRFLGPE------GARGFRVEVQSGEAVVLSAKAAGPTFTYAPMADRVSQVR 523

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           V               L     +   +   R         +     D + +      ++ 
Sbjct: 524 VMALDRVG--------LEGFPSDPLPFRERR----SFYEGKKHLPQDPVGAEAYLRRAVA 571

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV--GKLK 312
              +   A    A +L  Q +  +A+ + EK   +   P+I   Y  LL           
Sbjct: 572 AFPDDAEAIGELAFALYLQGRHAEAKPLYEKALALLDSPDIRVRYARLLYHMGRYGEAEA 631

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              ++   +  ++++   ++++ L +G   +A   A   + + P   +            
Sbjct: 632 GYRQVLAQDPGNLDARWGLAEVVLALGRAKEAELLARGVLAVKPDYPLGRFTLAKALLEQ 691

Query: 373 HNTDKILYWTQSALHAMPDP 392
              ++     +  L A PDP
Sbjct: 692 GKKEEARRLLREELRANPDP 711


>gi|118581736|ref|YP_902986.1| glycosyl transferase family protein [Pelobacter propionicus DSM
           2379]
 gi|118504446|gb|ABL00929.1| glycosyl transferase, family 2 [Pelobacter propionicus DSM 2379]
          Length = 1268

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 41/161 (25%), Gaps = 38/161 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL   I LA+   + A    E   +   T       L   +   GD   A     +A  +
Sbjct: 711 LLRGHILLAKGDLSAATGCFEKFCKQCPTNAHGFVGLAEIARLSGDGALAALLLERAFRL 770

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P +                                        +        AD+  + 
Sbjct: 771 DPSSI--------------------------------------SIATRYHASIADQEHLD 792

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            S     E+     +S   +      L+   + R+A  ++E
Sbjct: 793 GSERAVAEARHFYPDSDTLAYIHIDVLLRCERFREAMAVVE 833


>gi|116626051|ref|YP_828207.1| hypothetical protein Acid_7009 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229213|gb|ABJ87922.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 1346

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 89/274 (32%), Gaps = 37/274 (13%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166
               +++T H   L+ L+          ++  A +     L   A    A          
Sbjct: 631 RAALKKYTAHQPELLNLVPETAEYLALGEHGKAIQLFSESLAKQANDAMAHARYSRILIS 690

Query: 167 IGDLNSAQRYATKALDISPD-------APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            G   +A R A KA ++ P          W  +       +   W  A +    +K    
Sbjct: 691 AGLGGAALREARKATELDPGSGLAWQSLAWAYQHDTFGRRMQGNWGYAESEKALRKAVEL 750

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKL------CDNSIMASICAAKSLISQ 273
           + +   A + +A  LE+  +G   A      E++ +          I A+   A +L+  
Sbjct: 751 DADDMVARMDLAILLEHNQRGWRYAKDARLEEAIAVYREIVKDPRGIGAAQNLAIALLRA 810

Query: 274 NKKRKAEVILEKIWKVNPH-PEI-----------ANIYTHLLSENTVGKLKR------AL 315
            K    + +L+K    N H PE+           A +     S+    + +       A 
Sbjct: 811 GKLDDLKEVLKK---HNLHNPELQAVVTALQEGPARVVVEAQSQQPDARQRAAFLGSVAG 867

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            L ++ K   E   ++ + A   G++     +A 
Sbjct: 868 TLVQLRK--YEQAAVIMRAAARAGNLPDLQTRAD 899


>gi|302038616|ref|YP_003798938.1| hypothetical protein NIDE3325 [Candidatus Nitrospira defluvii]
 gi|300606680|emb|CBK43013.1| exported protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 298

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 57/188 (30%), Gaps = 19/188 (10%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A ++ +  L++      A  +L      +G  ++A     +AL + PD P     
Sbjct: 89  GDLGQAIDEFKHALRLQPNYFAAHLNLANTLLDVGRNDAAMVEFKEALRLKPDDPKTHND 148

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           +            AI       ++   + N +  + +  +++     GD+  +  +   +
Sbjct: 149 LGVALKEMGNLEGAIAEFRAVLRHNPSDVNAHNNLGVTLKAM-----GDLDGAIAEYRTA 203

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312
             L  N + A       L+ + +   A                     HL   +   +L 
Sbjct: 204 ASLQPNDVNAHFNLGLGLMEKRQPEAAVSEFRTA-------------LHLRPNDAKIRLN 250

Query: 313 RALRLEEI 320
               L  +
Sbjct: 251 LGNALAGM 258


>gi|302784832|ref|XP_002974188.1| hypothetical protein SELMODRAFT_100291 [Selaginella moellendorffii]
 gi|300158520|gb|EFJ25143.1| hypothetical protein SELMODRAFT_100291 [Selaginella moellendorffii]
          Length = 424

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 42/208 (20%)

Query: 127 VQIALAERQYNIAHEKL-EMMLQIPA--TR-EFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +    + ++  A E+  E +   P   T+       L     ++G    A    + AL 
Sbjct: 197 AEDLFEKGKFRKAVEQYNEALSLDPEHETQSFVLYLGLCKTLVKLGRGKEALPACSSALK 256

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           I  +         +  +L ++W  A++       +  +    R        L  A+KG  
Sbjct: 257 IDGEHAEALLQSGEAKILVEDWEGAMSDFKTSF-HKSQSQSAR------EGLHRAEKGLK 309

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--------- 293
           ++   +  E            I   ++  S    ++A   L   W    HP         
Sbjct: 310 LSKRRNWYE------------ILGVETTASAADIKRAYKKLALQW----HPDKNVDNKEE 353

Query: 294 ------EIANIYTHLLSENTVGKLKRAL 315
                 +IA  Y  L  E+   +  R  
Sbjct: 354 AERKFQDIAAAYEVLGDEDKRTRYDRGE 381


>gi|268316553|ref|YP_003290272.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334087|gb|ACY47884.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 410

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     KA ++ PD P V   ++  YV A +   A+    +  +   +    R    
Sbjct: 213 PEKALEVLEKARELYPDDPEVQSQLLNAYVQAGKVDEAMNVYKEAVEREPDNKLYR---- 268

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
                   + G    +     ++ +L      A      + I++
Sbjct: 269 YNYGSLLLEAGRYDEAIEHLTKATELDPEYANAFYNLGAAYINK 312



 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 34/229 (14%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTE----AVVQQYVLAKEWS-RAIT---------- 209
            R  D   A     KAL  +P      E     ++      +     A            
Sbjct: 43  LRNKDYARALENVEKALQRNPQNAEAYELKGRIILDILANQQNLDPEARQDTVRAMVAAF 102

Query: 210 ----FLNQKKKNAKEWNRNRAIL------LIARSLENADKGDMIASYHDAIESLKLCDNS 259
                L+ K +         A +      + A +    D    + +      +  +  +S
Sbjct: 103 QKAVELDPKLQENVLNQLRFAYVREFQNGVNAFNRGREDATYYLHAASYFENATIIQPDS 162

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIY-THLLSENTVGKLKR 313
             A +  A SL++  ++ +A   LE          + +  +A++Y      E  +  L++
Sbjct: 163 AGAYVNEAFSLLNAGRQAEAIPPLETAIAKGENSKDTYLILADLYRLQQQPEKALEVLEK 222

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           A  L     +  E    +    ++ G +D+A      A++  P  +++ 
Sbjct: 223 ARELY---PDDPEVQSQLLNAYVQAGKVDEAMNVYKEAVEREPDNKLYR 268


>gi|220933471|ref|YP_002512370.1| transcriptional regulator, SARP family [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219994781|gb|ACL71383.1| transcriptional regulator, SARP family [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 689

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%)

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
            V  L       GD  +    A +A+ + P A  +  A++Q Y+ +     A     +
Sbjct: 613 GVRRLLDHDLGAGDHEAFLHLAEQAVALEPLAEDIQSALIQAYLHSGRKGDARLAYER 670


>gi|195388444|ref|XP_002052890.1| GJ17807 [Drosophila virilis]
 gi|194149347|gb|EDW65045.1| GJ17807 [Drosophila virilis]
          Length = 996

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 93/313 (29%), Gaps = 28/313 (8%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             +  +               L+  L V+       +          + +   +      
Sbjct: 608 GAVGARATRTRRLLLLIGFSVLLVALCVRTVRRNADWRDEESLFRSAIDVNPPKALGNLG 667

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
               S        A++   +A+   P+   V   +   +   +++  A+    +  K   
Sbjct: 668 SVLSSQAR--YEEAKQVLQEAIRYRPNMADVHFNLGILHQNQQDYKSAVECFQRAIKFRP 725

Query: 220 EWNRNR-----AILLIARSLENADKGDMIASYHDAIESLKLCDNSI--MASICAAKSLIS 272
                      + + + +  +  +   + A+   A    +   +     A +      + 
Sbjct: 726 SLAVAYLNLGISFIALGKRQQAIEILQVGATLEGATVRDRSAHDQARSSAYLQLGALYVE 785

Query: 273 QNKKRKAEVILEKIWKVNPH---------PEIANIYTHLLSENTVGKLKRALRLEEINKE 323
           Q K ++A  +  +     P            I +++  L   +   +  RA    E+   
Sbjct: 786 QGKLQRALAVYREALSSLPTLLQQREVLYQRIGDVFGRLQQWDEAERHHRAA--LELQPN 843

Query: 324 SVESLV----IVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
            V + +     +++ +        A      A+K+AP +  ++   A+     S + +  
Sbjct: 844 QVAAHLSYGITLARNSSRASE---AEMWFKRALKLAPEQASVYHHYAEFLALQSRHHESA 900

Query: 379 LYWTQSALHAMPD 391
           +Y  ++A  A  D
Sbjct: 901 VYHRRAAELAPTD 913


>gi|17547882|ref|NP_521284.1| TPR domain protein [Ralstonia solanacearum GMI1000]
 gi|17430188|emb|CAD16951.1| probable tpr domain protein [Ralstonia solanacearum GMI1000]
          Length = 700

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 58/225 (25%), Gaps = 44/225 (19%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R+  L+ A   A +A+ ++P +     A+        +   A+    Q  +        
Sbjct: 262 KRVERLDEALAVARQAVVLAPRSAEAHHALAMALQTLGQTDEALPHFEQAARLPGAVAEE 321

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVIL 283
               L+ R+    + G   A+     ++L+    S+ A    A +   +           
Sbjct: 322 ---ALVGRATLLMEAGRRDAARAAFDQALEQFPGSVQALAGRADARTFTAGD-------- 370

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                    P+IA +   L          R                 + K  L++    +
Sbjct: 371 ---------PDIAALEACLAEGERRSLRDRISA-----------HFALGKAYLDLQDPAR 410

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           A        +       +            +      W +    A
Sbjct: 411 AFHHLDAGNRQKRSTFTY------------DGAASRRWMERIAEA 443


>gi|87307735|ref|ZP_01089878.1| Thioredoxin [Blastopirellula marina DSM 3645]
 gi|87289349|gb|EAQ81240.1| Thioredoxin [Blastopirellula marina DSM 3645]
          Length = 287

 Score = 38.0 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 56/158 (35%), Gaps = 11/158 (6%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI---LEKIWKVNPHPEIA 296
            +  A      ++++L     +A I  A+    Q +  +A  +   LE+   + P  E  
Sbjct: 130 AEPSAVEAKLQQAIELDPKLDVAKIMLAEHYYDQQRNDEATAMIATLEERGFLEPEAEKV 189

Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                L    +  G ++       ++ +  E ++ +++     G  +++   A+  ++  
Sbjct: 190 KAALELRKLGDAAGGVEACRAEMAVSPDDAEKMLKLAESLAAAGQFEESLETALAVVRKD 249

Query: 356 -----PRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
                       L+  + +  + + + +  + +    A
Sbjct: 250 RAGHGETAR--QLMVDVFRQLADDEELVNNYRRKLATA 285


>gi|332663698|ref|YP_004446486.1| hypothetical protein Halhy_1724 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332512|gb|AEE49613.1| Tetratricopeptide TPR_2 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 550

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQR 175
             LV L           +  A  K E +L +     TR  A+  L   + R+  L+ A+R
Sbjct: 269 PALVNL--AWAYFRNGHFEKAILKFEKLLSVAKLGATRSTALNGLAQSNLRLKHLDKAER 326

Query: 176 YATKALDISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
              + +   P   +      +  ++     ++   A+    Q +  A E     A   + 
Sbjct: 327 AFQQGIKEFPQDLYFYGNYGDFKIRY---KRDTFGALELYRQARAQAPE----TAAGYLF 379

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +S     +    ++     ++L+   N++ A     +    +    +A  I
Sbjct: 380 QSASLFYENRRDSAVTMLYKALEYDPNNLDALRQIIQIEFRKGNFEQALRI 430


>gi|319781910|ref|YP_004141386.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167798|gb|ADV11336.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 544

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 55/188 (29%), Gaps = 14/188 (7%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
             +G   +A  +   A+D+ PD     + +        ++  A               R 
Sbjct: 76  RDLGRPAAAIDFFRGAVDLRPDQLAARDNLGSSLKQVGQFEEAEEIYRGTVARNPFHVRA 135

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           R    I  +    + G +  +     E+L +              L+ + K  +A  +  
Sbjct: 136 R----IGLAETLQEAGRLDEALAAFREALAIRPKDADLLHGLGVGLMEKGKLDEAADLFR 191

Query: 285 KIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVI----VSKIAL 336
           +   +N  P +A  +  L      +    +L           +   + +     + K   
Sbjct: 192 QALAIN--PAMATAWLMLTQVKRQKERDSELGGMEAQHAKAPQDSLARMQLSFGLGKAND 249

Query: 337 EMGSIDQA 344
           ++    +A
Sbjct: 250 DLRDYGRA 257



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 46/156 (29%), Gaps = 3/156 (1%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                A +++     ++ FH    + L   +      + + A       L I       +
Sbjct: 113 GQFEEAEEIYRGTVARNPFHVRARIGL--AETLQEAGRLDEALAAFREALAIRPKDADLL 170

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
           + L       G L+ A     +AL I+P        + Q     +     +  +  +   
Sbjct: 171 HGLGVGLMEKGKLDEAADLFRQALAINPAMATAWLMLTQVKRQKER-DSELGGMEAQHAK 229

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           A + +  R  L       N D  D   ++    E  
Sbjct: 230 APQDSLARMQLSFGLGKANDDLRDYGRAFDYFAEGN 265


>gi|303327929|ref|ZP_07358368.1| translation initiation factor IF-2 [Desulfovibrio sp. 3_1_syn3]
 gi|302861755|gb|EFL84690.1| translation initiation factor IF-2 [Desulfovibrio sp. 3_1_syn3]
          Length = 447

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 20/150 (13%)

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--- 294
                + + H A++  +            AK+L+++ +  +A  +  ++ +  P  +   
Sbjct: 22  ATAAPLPALHLALDQSRAQ----------AKTLVNKGRYEEAYQLYMRLLREEPDNDEIN 71

Query: 295 --IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             +A         +    L    RL +      +    ++ + L +G  D A  +  LA 
Sbjct: 72  YGLALAAARTRRYSQA--LLAFERLIDRYPADAKLRRSLADVYLRLGDRDAARRELDLAR 129

Query: 353 KIAPR---KEIFLLLAQIEQANSHNTDKIL 379
           +  P      I  +L  +E + S       
Sbjct: 130 QYDPTLTATRIARILDNLENSQSRFQAHGR 159


>gi|300782133|ref|YP_003762424.1| SARP family transcriptional regulator fused with ATPase domain
           [Amycolatopsis mediterranei U32]
 gi|299791647|gb|ADJ42022.1| SARP family transcriptional regulator fused with ATPase domain
           [Amycolatopsis mediterranei U32]
          Length = 1033

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 14/123 (11%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQI------PATREFAVYSLYFESCRIGDLNSAQRYATK 179
                L    +  A    E+          P +R  A       +   GDL +A+    +
Sbjct: 836 RAWTHLLSGDHARARADYELAAATARRSGMPESRAAAYVGSANLARLSGDLAAARELCER 895

Query: 180 ALDISPDAPWVTEAVVQ--------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           AL   P   + +E V            +   + S A++         ++WN +  +    
Sbjct: 896 ALAECPGGSFSSETVRATALIALGWLALAEGDRSSAVSLHRSAVLIGRQWNASDVVAFAL 955

Query: 232 RSL 234
             L
Sbjct: 956 EGL 958


>gi|296447504|ref|ZP_06889427.1| peptidase C14 caspase catalytic subunit p20 [Methylosinus
           trichosporium OB3b]
 gi|296254971|gb|EFH02075.1| peptidase C14 caspase catalytic subunit p20 [Methylosinus
           trichosporium OB3b]
          Length = 677

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 20/194 (10%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G+      ++  A K     +         +   L  +        ++A       L+ 
Sbjct: 72  RGIAKAGMGDLDGALK--DLTAALDRNPKMLVALKLRGKAYKELNHLDLAIADFSRALRD 129

Query: 150 ------PATREFAVYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
                    +   +Y+L   +    D  ++A     KAL I  +           Y   +
Sbjct: 130 ALRGEQNRAQAVELYNLRGATQIDKDEYDTAIGDFNKALAIDRNYVDAYVNRGHAYTFKR 189

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           ++ +AI   +Q  +         A    AR++    K D   +  D   ++KL       
Sbjct: 190 DFDKAIADFDQAVRLKP----RDAFGYAARAMARMGKADFTGAVADYDRAIKLDPQ---- 241

Query: 263 SICAAKSLISQNKK 276
               AK   S+ + 
Sbjct: 242 ---NAKLYTSRGEA 252


>gi|27375774|ref|NP_767303.1| hypothetical protein blr0663 [Bradyrhizobium japonicum USDA 110]
 gi|27348912|dbj|BAC45928.1| blr0663 [Bradyrhizobium japonicum USDA 110]
          Length = 258

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 8/134 (5%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           + P  R  +      +  ++G    AQ+Y   AL I PD P V   +   YVL     +A
Sbjct: 133 EDPDWRILSAQGAALD--QLGRNEEAQQYYATALKIVPDEPQVLSNLGLSYVLQNNLPKA 190

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              L +  +  +   R RA L +   L+  +    I    D      L  +   A I A 
Sbjct: 191 EQVLGRAHQRNQNDARIRANLALVLGLQGREAEAEILVKAD------LPPDQAAAKITAL 244

Query: 268 KSLISQNKKRKAEV 281
           + L+++ ++++AE 
Sbjct: 245 RQLLAKKQQQRAEK 258


>gi|325915371|ref|ZP_08177688.1| type IV pilus biogenesis/stability protein PilW [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325538418|gb|EGD10097.1| type IV pilus biogenesis/stability protein PilW [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 262

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 61/225 (27%), Gaps = 38/225 (16%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     R GD   A+     AL   P +      +        + + +        + A
Sbjct: 52  GLASNRMRTGDYAGAEEQIRAALKKDPQSVDAIGMLALIQGGRGDIAGS----GASYRRA 107

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKK 276
            E    R  +L          G    S      +L     +  AS    A    +   + 
Sbjct: 108 AELAPQRGDVLNNYGAWVCANGSPAESLVWFDRALADRTYASPASALGNAGGCALKAGQP 167

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +A   L K  +++P                             N  ++ES   ++++  
Sbjct: 168 ERAASDLRKALELDP----------------------------SNPYALES---MARLEA 196

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
              +  +A A     +  AP    +  L  QIEQ          Y
Sbjct: 197 GRRNYFEARAFIERRLSAAPVTASVLQLAIQIEQGLGDKVAASRY 241


>gi|323136146|ref|ZP_08071228.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
 gi|322398220|gb|EFY00740.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
          Length = 815

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/95 (10%), Positives = 32/95 (33%), Gaps = 5/95 (5%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  ++ +         +A  A  I+P  P  +  +    +   ++  A   ++Q ++   
Sbjct: 308 LAQQAKQYEATELQLEWAELANAINPSDPMTSGHLADALIGKGDFVAAYEAIDQTERRGD 367

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
                      +R+     +G    ++   + + +
Sbjct: 368 PL-----YAATSRARIRRLEGHYAEAHELYLNAAR 397


>gi|319795784|ref|YP_004157424.1| hypothetical protein [Variovorax paradoxus EPS]
 gi|315598247|gb|ADU39313.1| Tetratricopeptide repeat [Variovorax paradoxus EPS]
          Length = 326

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 6/144 (4%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 Q  ++ +  + ++  P         L   +   GD   A +   +A   +P   
Sbjct: 114 ALRQTGQAAMSEDAYKRLMGTP-LEAAGYRGLGLLAGARGDYTLAVQMLKQAQRRTPTDA 172

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +   +    + A   S A   L Q  +   +  + +A L +       +     A  + 
Sbjct: 173 LLLSDLGYASLRAGLMSEARLPLMQALQLKPDSQQAQANLALY-----LELSGQTAQANS 227

Query: 249 AIESLKLCDNSIMASICAAKSLIS 272
            +E+ ++   +    + AA+ L S
Sbjct: 228 LMETSRMPAATRAGVVEAARQLRS 251


>gi|312078652|ref|XP_003141831.1| hypothetical protein LOAG_06247 [Loa loa]
 gi|307763005|gb|EFO22239.1| hypothetical protein LOAG_06247 [Loa loa]
          Length = 578

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%)

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E+  + A+    R+      GD   S  D  ++L L      A +  AK+ +S ++  +
Sbjct: 98  PEYKNHLAVCYQNRAAAYDRLGDPARSIVDCTKALGLDPLYFKAVVRRAKAYLSLSRPEE 157

Query: 279 AEVILEKIWKVNP 291
           A   L   + +NP
Sbjct: 158 ALDDLTYAFVMNP 170


>gi|242214311|ref|XP_002472979.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727951|gb|EED81856.1| predicted protein [Postia placenta Mad-698-R]
          Length = 944

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 54/159 (33%), Gaps = 4/159 (2%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
               ++  A +      Q+     F+   L     + G+  ++     + L   P     
Sbjct: 71  FIMNEFKEAADNYTKSTQLDDEFVFSHIQLAVAQYKAGNTANSMATFRRTLKAFPQRSEP 130

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENAD-KGDMIASY 246
                +  +  + +  A+    +  +  +E ++     A+  + + L     K D+ A+ 
Sbjct: 131 HNYYGELLLDQQRFGDAVDKFERAIEIEQERSKPPPINALPHVNKGLALFQWKQDIAAAE 190

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               E+LKL      A    A+  + Q K   A  + ++
Sbjct: 191 ECCQEALKLDPECEAAVATLAQLSLQQGKIDIAMXMFKR 229


>gi|239817309|ref|YP_002946219.1| hypothetical protein Vapar_4342 [Variovorax paradoxus S110]
 gi|239803886|gb|ACS20953.1| Tetratricopeptide domain protein [Variovorax paradoxus S110]
          Length = 616

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 18/214 (8%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVY-LLEVQIALA-----ERQYNIAHEKLEMMLQ----I 149
             LA +   + + +           L+  Q   A     + +   A E +  + +     
Sbjct: 372 SQLAERRKDFTAAERWLARVDGTDELVVAQTRRAGLLARQGKLPQARELVRGLPERAPED 431

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
              +  A   L  ++ +     +A     +A   +P+     + V  Q ++A++ +R + 
Sbjct: 432 KKQKFLAEVQLLRDAKQ---YQAAYDMLAQASAAAPNDS---DLVYDQAMVAEKLNR-LD 484

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAK 268
            + +  +   E          A     AD K  +  +     ++++L       +     
Sbjct: 485 EMERLLRRLIELKPENQNAYNALGYSFADRKIRLDEARTLIQKAVQLAPEDPFIADSLGW 544

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
                    +A  ILE  +K  P PEI   +  +
Sbjct: 545 VEFRLGNTTEAIRILETAYKTRPDPEIGAHFGEV 578


>gi|255941076|ref|XP_002561307.1| Pc16g09970 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585930|emb|CAP93667.1| Pc16g09970 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1086

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 6/158 (3%)

Query: 127 VQIALAERQYNIAHE-KLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDIS 184
              A  +  Y  A +  ++ +   P    FA +SL  E     G+ + A           
Sbjct: 163 ATSAFIDGDYERAIDLVMQAIQINPEM--FAAHSLLSEIFLAQGEKDKALAALFNGAHTR 220

Query: 185 PDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           P  P  WV  A +      +    A+  +        E + +   +   R+    + G  
Sbjct: 221 PKDPGVWVKVARLILDRAGENRQSALHDVAYCYSRILEVSPDNTNIRFQRAAIYRELGHN 280

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             +  +    LK C +S  A    A++ I  N  +KA 
Sbjct: 281 GRAAAEYERLLKDCPHSARALRHIAETYIDLNDVQKAV 318


>gi|159901775|ref|YP_001548020.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894814|gb|ABX07892.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 284

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 51/258 (19%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMML---------QIPATREFAVYSLYFESCRIGDL 170
            L +LLE Q      +Y  A    E  L         + P T   +V++L     R G  
Sbjct: 18  SLYHLLESQ-----GRYGEAQRLYERALAVREAVLGAEHPDT-ATSVHNLASVLKRQGRY 71

Query: 171 NSAQRYATKALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW- 221
             AQR   +AL +         P+  W    +         ++ A     +     +   
Sbjct: 72  AEAQRLYERALAVRETVLGAEHPNTAWSVNNLALVLESQGRYAEAQRLFERALAIREAVL 131

Query: 222 ---NRNRAILLIARSLENADKGDMIASYHDAIESLKLC--------DNSIMASICAAKSL 270
              +   A  +   ++    +G    +      +L +          ++  +    A  L
Sbjct: 132 GAEHPATATSVNNLAVVLESQGRYAEAQRLYERALAVREAVLGAEHPDTATSVNNLALVL 191

Query: 271 ISQNKKRKAEVILEKIWKV------NPHPE-------IANIYTHLLSENTVGKL-KRALR 316
             Q +  +A+ + E+   +        HP+       +A +           +L +RAL 
Sbjct: 192 KRQGRYAEAQRLYERALAIYEAVLGAEHPDTATSVNNLAVVLERQGRYGEAQRLYERALA 251

Query: 317 LEE--INKESVESLVIVS 332
           + E  +  E  ++ +I +
Sbjct: 252 IYEAVLGSEHPDTQIIRA 269


>gi|149280571|ref|ZP_01886687.1| TPR repeat-containing protein [Pedobacter sp. BAL39]
 gi|149228686|gb|EDM34089.1| TPR repeat-containing protein [Pedobacter sp. BAL39]
          Length = 571

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 91/307 (29%), Gaps = 43/307 (14%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV--QIALAERQY------- 136
           KA+  GL  +   +   A+ +            +    +L+   +    + +        
Sbjct: 6   KAITLGLGLVVMGSASFAQSLSDAKKALDAEQYQKATSMLKALVKSQEKKGENYFNLGNV 65

Query: 137 -------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
                  + A    +  +            L        +  SA+    KA+++S    +
Sbjct: 66  YLQTDYIDSARAVFQQGVTADPKNSLNYIGLGEADLLSNNAASAKTNFDKAVEVSSKKDY 125

Query: 190 VTEAVVQ---QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           + +  +          +++ A+ +L +   +  + N   A   +A    NA +     + 
Sbjct: 126 IPQLYIGKAYLLGDKPDFAAALPYLQKA--DELDANDKDAETFLAMGDYNALQRKNSEAL 183

Query: 247 HDAIESLKLCDNSIMASICAAKSLIS----------QNKKRKAEVILEKIWKVNPHPEIA 296
            + + +L +    + A +   K               N+   A+      ++     EIA
Sbjct: 184 QNYMRALNIDGTLLRAKVQIGKMYKESRAFPESEGQLNEVIAADANYGPAYR-----EIA 238

Query: 297 NIYTHLLSENTVG-KLKRALRLEEINK------ESVESLVIVSKIALEMGSIDQAHAKAM 349
            +Y    +      + K A  L    K      +S ES +  ++             +  
Sbjct: 239 ELYMQWANFEPANFEAKAAQALTNYKKYLDLTDKSYESRLRYAQFLFYAKDFKTLEQETA 298

Query: 350 LAMKIAP 356
               ++P
Sbjct: 299 ALATMSP 305


>gi|50413212|ref|XP_457226.1| DEHA2B06094p [Debaryomyces hansenii CBS767]
 gi|49652891|emb|CAG85221.1| DEHA2B06094p [Debaryomyces hansenii]
          Length = 606

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 81/241 (33%), Gaps = 26/241 (10%)

Query: 60  AVSRFFLSCPAMLFH------MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113
           A  +F  + P            L  R     ++AL      I A     A  +  +   +
Sbjct: 331 AAIKFLKNDPTAAASDIAKAMALKPRPRTYIFRAL------INADKASFAEAISDFEEAK 384

Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173
                    +    Q+         A E   +   +     +A   L   + + GD+ +A
Sbjct: 385 RINPKFPDTFYHLGQLYYLTGDLQKAEENFTLAKDLNPNNVYAHIQLACITYKNGDIKAA 444

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNR------N 224
           +   T+A    P +P +     +      +   A    +   +       ++       N
Sbjct: 445 EDKFTEAKLKFPTSPEIPNYYGEILADRGDIQAACKQFDTAARLQTALPTYSVGALPLIN 504

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           +A L+   SLE  D+ + + +     ++ +L   S +A I  A+  + + +  +A V+ E
Sbjct: 505 KATLISRESLERMDESEKLLT-----DACELDPKSELARISLAQIKLQKEQVDEAIVLFE 559

Query: 285 K 285
           +
Sbjct: 560 E 560


>gi|70732566|ref|YP_262329.1| hypothetical protein PFL_5257 [Pseudomonas fluorescens Pf-5]
 gi|68346865|gb|AAY94471.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 248

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 33/98 (33%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165
               +S         L  L   Q   +    N A   LE   ++       +Y L     
Sbjct: 132 RAGGLSADEQLDGPVLALLTTAQQQQSSGDLNGASSSLERAQRVAPREPQVLYRLAQVRM 191

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             GD   A+++A + L  +   P +  ++ +    A+E
Sbjct: 192 AQGDAPQAEQFARRGLSFANGRPDLQASLWELIAQARE 229


>gi|19075623|ref|NP_588123.1| chaperone activator Sti1 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|12643907|sp|Q9USI5|STI1_SCHPO RecName: Full=Heat shock protein sti1 homolog
 gi|4539286|emb|CAB39910.1| chaperone activator Sti1 (predicted) [Schizosaccharomyces pombe]
          Length = 591

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 48/178 (26%), Gaps = 14/178 (7%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A +    +        + L  L              A +  +  L    T +      
Sbjct: 322 EDAIEQGRELRADFKLIAKALGRL--GTTYQKRGDLVKAIDYYQRSLTEHRTPDILSR-- 377

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                 + D   ++    +   I PD    +     +   + +++ AI    +  K A  
Sbjct: 378 ------LKDAEKSKELQDREAYIDPDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPS 431

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
             R        R+              D  ++++L  N   A +  A++L       K
Sbjct: 432 DPRG----FGNRAAAYLKVMAPAECIRDCNKAIELDPNFAKAYVRKAQALFMLKDYNK 485


>gi|87307162|ref|ZP_01089307.1| TPR repeat protein [Blastopirellula marina DSM 3645]
 gi|87289902|gb|EAQ81791.1| TPR repeat protein [Blastopirellula marina DSM 3645]
          Length = 643

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 53/168 (31%), Gaps = 36/168 (21%)

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
             +L    S+    + +   S      ++    + + A       L   ++  +A+  L+
Sbjct: 456 HRVLSNYASILETYQPNPALSELCYQRAIADNPDFVDARFNYGMFLFDSHRLGEAKEQLQ 515

Query: 285 KIWKVNPH-PEIANIYTHLL----SENTVG-----------KLKRALRL----------- 317
             ++  PH PE+      +     + +              +  +A +L           
Sbjct: 516 IAYRKAPHLPELLEKLASIELHEGNHDAAQKYLQQDLALNPRSAKAHQLLGSCLEQRDDQ 575

Query: 318 ---------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                     ++N   VE+   ++ + + +G  D A      A+ + P
Sbjct: 576 SAVVHYLTAIQLNPRYVEAHNNLADVFVRLGRYDLAQTHLQAALALEP 623


>gi|84496297|ref|ZP_00995151.1| hypothetical protein JNB_02220 [Janibacter sp. HTCC2649]
 gi|84383065|gb|EAP98946.1| hypothetical protein JNB_02220 [Janibacter sp. HTCC2649]
          Length = 628

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 33/107 (30%), Gaps = 4/107 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                AH      +++  T   A+  L            A  Y  +AL ++P    +   
Sbjct: 472 GDDEGAHTAYRRSIEVHRT-AVALRGLAL--LTADATERADLY-RQALALAPQDRRLAVE 527

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           ++   + +       + +    +  +   R + +L  A +    D  
Sbjct: 528 LLTDLLQSGRADEVASTVAALPEAVRAHGRTQMLLADALATTGQDAA 574


>gi|268594490|ref|ZP_06128657.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
 gi|268547879|gb|EEZ43297.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
 gi|317163907|gb|ADV07448.1| putative periplasmic protein [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 614

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 131 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 184

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 185 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 244

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 245 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 297

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 298 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 352

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 353 YADRRDYAKVRQWLKK-VSAP 372


>gi|323339437|ref|ZP_08079719.1| tetratricopeptide repeat family protein [Lactobacillus ruminis ATCC
           25644]
 gi|323093148|gb|EFZ35738.1| tetratricopeptide repeat family protein [Lactobacillus ruminis ATCC
           25644]
          Length = 419

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 8/149 (5%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            Q   A ++    + +        +YSL  E   +G    ++R   K L+  PD   +  
Sbjct: 14  GQLEEAKKEFGWALRKDDDQM---IYSLAEELYSLGFSKQSRRAYEKLLERYPDEDGIKT 70

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A+    +      RA+  L Q   ++  +    A+L+ A   +     D+       +E+
Sbjct: 71  ALADIEISDGNDDRALELLAQITPDSDSY--LEALLVSADLYQTQGMFDVSE--QKLLEA 126

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEV 281
            +L  +  +     A+   +  + RKA  
Sbjct: 127 RRLAPDETVILFGLAELYFNVKEYRKAAQ 155


>gi|167901247|ref|ZP_02488452.1| tetratricopeptide repeat protein [Burkholderia pseudomallei NCTC
           13177]
          Length = 526

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 13/160 (8%)

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +  ++ +   R   I L A+S           +   A    +    S  A+   A  
Sbjct: 22  ALARDTRDPRMAQRATEIALAAQS--------PADALTAANLWREYSPGSQRAAQVDAAL 73

Query: 270 LISQNKKRKAEVIL-----EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324
           L+   K  +A+ +L         +      IA         N VG L     L + +   
Sbjct: 74  LVLGGKPAEAQPMLSQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGR 133

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
            E+ + +++  L     D A      A++I P      L+
Sbjct: 134 PEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALM 173



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 16/171 (9%)

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           +A + +     D   +     E+L++  + + A++     L       +A  I      V
Sbjct: 138 LAIARQQLATDDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFV 193

Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             +P+     +A    +L  +      K+   +   +      L+ ++ I ++   +D A
Sbjct: 194 QQNPKSRDGRLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDA 253

Query: 345 HAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
                  +K+A +K      + ++ LAQI   + +N      W      A 
Sbjct: 254 TTYLKQYVKVAQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 303


>gi|158335901|ref|YP_001517075.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158306142|gb|ABW27759.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 1457

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 52/186 (27%), Gaps = 25/186 (13%)

Query: 105  KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
            K      +        L+ LL+          + A   +  M             L  E 
Sbjct: 964  KDARLAFRLTLLELPNLMMLLDWLAEQLTADASRAE-AIAAMAGSIE-------HLLAEL 1015

Query: 165  CRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKE----WSRAITFLNQK 214
             R   L  A     +A    P+  W        + V+++ +   +    + RA T L Q 
Sbjct: 1016 GRPQALARAVVLRERAAAAIPN--WGHVRFENEQLVIERLLQDGQLQTAYERAQTLLEQA 1073

Query: 215  KKNAKE----WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-ASICAAKS 269
            K+         + + A+            G    +      + KL +         AAKS
Sbjct: 1074 KEAGANAYSGADYHLAVAHSMLGQVLVKGGQAALALELLRTTQKLFEALGEQGERMAAKS 1133

Query: 270  LISQNK 275
            L  Q  
Sbjct: 1134 LTRQAD 1139


>gi|89070189|ref|ZP_01157517.1| TPR domain protein [Oceanicola granulosus HTCC2516]
 gi|89044205|gb|EAR50356.1| TPR domain protein [Oceanicola granulosus HTCC2516]
          Length = 574

 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 41/158 (25%), Gaps = 4/158 (2%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           +++AA    +          Q+T         L  + A     +  A E  +        
Sbjct: 9   LALAAGLGIVTAGTAGVAHAQNTSRPGNAGVYLAARQASQAGDFRAAAEFFQQAHARDRA 68

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
             + + +       + D+  A   A +A  +   +               +W R    L 
Sbjct: 69  NGYLLENAIAALVAVHDMERAAELAEQAHVLGVRSQVANMVSFGAAAEQGDWRRVFNDLE 128

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                    +     L  A +    +      +  DA+
Sbjct: 129 AGLSVGPLVDG----LAQAWAFVGLEDAHRAEAAFDAV 162


>gi|307201826|gb|EFN81491.1| Intraflagellar transport protein 172-like protein [Harpegnathos
            saltator]
          Length = 1549

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 82/325 (25%), Gaps = 79/325 (24%)

Query: 94   SIAAHNIPLARKMHSY---------VSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKL 143
             + A +   A ++            V  +H  + + +  L   +        ++ A    
Sbjct: 768  HVQAGDWIRAHQVAQEYMKSDEANEVLARHAENLQQIGELRHAEALYIAIGDHDAAIAMY 827

Query: 144  EMMLQIPATREFAVYSLYFE--SCRIGD--LNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                                  +    D    +    A + LD +       E  +    
Sbjct: 828  RK---------TGQRGDMIRLVAEHRPDLLQTTHTHLARE-LDAAGKPREAEEHFLG--- 874

Query: 200  LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCD 257
             A +W  A+                R+  +   +L  A K     +      + +  L  
Sbjct: 875  -AGDWRGAVAA-------------YRSANMWEDALRVAKKASGEKAAQQVALMWARTLAP 920

Query: 258  NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317
                     A+ L+  N     E  L+   + N    +      +    T  + K     
Sbjct: 921  EL------GARLLMRLN---YLEPCLQLACEAN----LFEWALEIAKYGTADQKKEVHYR 967

Query: 318  EEINKES------VESLVIVSKIALEM-----------GSIDQAHAKAMLAMKIAPRKEI 360
              +  E        E   +++  A+E             + D A + +  A+      ++
Sbjct: 968  YAMALEDEGRFTEAEKEFVLAGKAMEAVQMYIHNRDWESAEDVARSHSQDAV-----AQV 1022

Query: 361  FLLLAQIEQANSHNTDKILYWTQSA 385
             +  A  E A   +          A
Sbjct: 1023 LIARAA-EAAEGQDYASAEALLLRA 1046


>gi|268600970|ref|ZP_06135137.1| periplasmic protein [Neisseria gonorrhoeae PID18]
 gi|268585101|gb|EEZ49777.1| periplasmic protein [Neisseria gonorrhoeae PID18]
          Length = 614

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 131 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 184

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 185 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 244

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 245 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 297

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 298 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 352

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 353 YADRRDYAKVRQWLKK-VSAP 372


>gi|269126066|ref|YP_003299436.1| LuxR family transcriptional regulator [Thermomonospora curvata DSM
           43183]
 gi|268311024|gb|ACY97398.1| transcriptional regulator, LuxR family [Thermomonospora curvata DSM
           43183]
          Length = 886

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 15/164 (9%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQ------IPATREFAVYSLYFESCRIGDLNSAQRYATK 179
             Q+A  +R +  A       L+              +  L   +   GD + A   + +
Sbjct: 471 RAQLAFDQRDFARAEGCARAGLEHCRAAGDERMVAAGLVVLASLALFEGDRDRALELSDE 530

Query: 180 ALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSL 234
           A+ + P     W     + +  L + W   +       +      R    R    + ++L
Sbjct: 531 AVRLLPAGHGGWEAALALFRKGLTQLWRDRLREAEAALREGIALMRGLDQRWGAAVGQAL 590

Query: 235 ---ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
                  +GD+ A+     E+L    + I A     + LI   +
Sbjct: 591 LGTVARARGDLAAARAHFTEALPALRD-IDARPLLVRCLIGLGR 633


>gi|163745839|ref|ZP_02153198.1| lipoprotein, putative [Oceanibulbus indolifex HEL-45]
 gi|161380584|gb|EDQ04994.1| lipoprotein, putative [Oceanibulbus indolifex HEL-45]
          Length = 283

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           LE  +A ++ Q++ A    E+ + +  T    + +  +     GD   A+R   +A+   
Sbjct: 144 LEAMVADSKEQWSRADSFYEIAVGLTTTPAAVLNNWGYSKLTRGDYAEAERLFGEAIRQD 203

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                    ++      ++++                   RA LL   +L    +GD+  
Sbjct: 204 DTLFTAKNNLIMARAAQRDYT---------LPVMPMEQSERAQLLHTMALSAIKRGDVET 254

Query: 245 SYHDAIESLKLCDNSIMASICAAKSL 270
                 E++        A++ + ++L
Sbjct: 255 GKGLLREAIDTHPQHFEAAVRSLRAL 280


>gi|148508298|gb|ABQ76082.1| tetratricopeptide repeat protein [uncultured haloarchaeon]
          Length = 248

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 35/126 (27%), Gaps = 5/126 (3%)

Query: 165 CRIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            +I     A     +A   +P     A          +   +EW  AI    +  +   E
Sbjct: 75  MQINRFEEATETFERAARFAPEESLAAQEAWVNKGAAHGQLEEWDEAIGSYKEALRIDDE 134

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                A      +    + G+  ++   A  ++K+      A       L  +    +A 
Sbjct: 135 SEHA-ASAETNLAYALWEAGEAESALQHAERAVKVDPRFPQAWYNRGFFLHERGLNEEAV 193

Query: 281 VILEKI 286
              +  
Sbjct: 194 SAFDNA 199


>gi|85708479|ref|ZP_01039545.1| hypothetical protein NAP1_04550 [Erythrobacter sp. NAP1]
 gi|85690013|gb|EAQ30016.1| hypothetical protein NAP1_04550 [Erythrobacter sp. NAP1]
          Length = 492

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 20/174 (11%)

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +      G+ + +   A  +L+L      A +  A+ +   N   ++    E      P 
Sbjct: 75  ARLRFRGGEHLTAIEAADYALELDPQYPSALLMRAQLVRDANGLLESLPWFEAAAAAAPS 134

Query: 293 -PEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
            PEI   Y   L +       L    +L  +  +  +   + + +A   G    A     
Sbjct: 135 DPEILADYAATLGDLGRYADMLTVVRQLAVVAPDHPQVHFLQAVLAARGGDPVLAGTLLN 194

Query: 350 LAMKIAPRKEIFLLLAQI----------------EQANSHNTD-KILYWTQSAL 386
            +  +       ++L  I                E A     + ++      AL
Sbjct: 195 RSGLVQRGVASAMMLNAIVNLQQGTFDTAAETLEELAERQPANVRVNELLARAL 248


>gi|322697483|gb|EFY89262.1| antiviral protein (Ski3), putative [Metarhizium acridum CQMa 102]
          Length = 1422

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 14/85 (16%)

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD-------ISPDAP 188
           +  A +  E +L+  +T   A+  +        + + A  +  +AL        +  +A 
Sbjct: 441 HQEAKQLFEKVLKRDSTSTSALIGVGLIFEEEEEYDQAIDFLERALKRDASNLRVKSEAA 500

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQ 213
           WV         L  +W  A   L++
Sbjct: 501 WV-------KALKGDWKTARHELSE 518


>gi|192291131|ref|YP_001991736.1| TPR repeat-containing protein [Rhodopseudomonas palustris TIE-1]
 gi|192284880|gb|ACF01261.1| TPR repeat-containing protein [Rhodopseudomonas palustris TIE-1]
          Length = 556

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 12/166 (7%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                ++   A   L+   K   +     A     R+      G    +  DA +++KL 
Sbjct: 77  LRTRQRDLVGAEADLDAAIKANPDA----ADAYTTRANFWNVSGKPDRALADADQAIKLD 132

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT------HLLSENTVGK 310
            N  +A      + +      +A     +  ++ P  E   +Y       H   ++    
Sbjct: 133 PNLPLAHFVRGSAELKLGHDDRAIADYSRAIELRPK-ESGEVYAVRGFAYHRKGDDIRAL 191

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 L +   E V +L+        +     A A    A+K+AP
Sbjct: 192 ADYTEAL-KAAPEDVGTLLNRGDARRNLRDTAGAAADYSEAIKLAP 236


>gi|162456202|ref|YP_001618569.1| TPR-like protein [Sorangium cellulosum 'So ce 56']
 gi|161166784|emb|CAN98089.1| TPR-like protein [Sorangium cellulosum 'So ce 56']
          Length = 508

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 55/168 (32%), Gaps = 18/168 (10%)

Query: 129 IALAERQYNIAHEKLE----MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             L++ +++ A   L+    ++   P         L        D    + +  KAL I 
Sbjct: 280 AQLSQDKHDKAEGTLKGAQNLLKDNPYPSL----HLAKLYQAKKDDAKEREFIEKALSID 335

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
            D       + Q      + + A+  + +   + K      A  +  +    A++     
Sbjct: 336 VDCIDAWAYLFQYEKQRGDEASAVAAIEKFSADKKTA----APYIAIQGFYAANEETRDK 391

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
           +   A +++    ++ +A +C +     +N       +L       PH
Sbjct: 392 AVEYAKKAVAQNPDNPLALLCLSALYGQKNDLEAVVRLL------QPH 433


>gi|146342081|ref|YP_001207129.1| hypothetical protein BRADO5222 [Bradyrhizobium sp. ORS278]
 gi|146194887|emb|CAL78912.1| conserved hypothetical protein; putative signal peptide; TPR domain
           protein [Bradyrhizobium sp. ORS278]
          Length = 289

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 13/129 (10%)

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295
           A   D  A      E  +   N    ++    +L +  ++ +A  +LE+    NP +  +
Sbjct: 52  AAASDPRAEVDQLRERFRATPNDPDLALRYGSALRATGQRSQAVAVLEQATIANPGNRAL 111

Query: 296 ANIYTHLLSEN-----TVGKLKRALRLEEINKESVESLVIVSK-IALE-MGSIDQAHAKA 348
              Y   L++N         L RA        E  +  ++ ++  AL+ MG  ++A    
Sbjct: 112 LAAYGRALADNGNFQQAFDVLSRAHS-----PEDPDWRILSAQGAALDQMGRNEEARQYY 166

Query: 349 MLAMKIAPR 357
             A+KIAP 
Sbjct: 167 ATALKIAPD 175


>gi|124028216|ref|YP_001013536.1| flap endonuclease-1 [Hyperthermus butylicus DSM 5456]
 gi|166973697|sp|A2BMI0|FEN_HYPBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
           structure-specific endonuclease 1
 gi|123978910|gb|ABM81191.1| Endonuclease [Hyperthermus butylicus DSM 5456]
          Length = 350

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 4/97 (4%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y E+ + GD  +A+RYA  A  ++ +     + ++    +   W +A      + + A  
Sbjct: 108 YEEAVKKGDTKAARRYAQMAARLTDEMVEDAKKLLDAMGVP--WVQAPA--EGEAQAAFM 163

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             R  A    ++  ++   G      + AI   +   
Sbjct: 164 ARRGDAWAAASQDYDSLLFGSPRLVRNLAITGRRKLP 200


>gi|116052812|ref|YP_793129.1| hypothetical protein PA14_61720 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588033|gb|ABJ14048.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 590

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 43/258 (16%)

Query: 109 YVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            +++      E L   LL  + A        A                     Y E    
Sbjct: 108 RIAEYLGADQEALDTSLLWARSAPDNLDAQRAAAIQLARAGRYEESMV-----YMEKVLN 162

Query: 168 GDLNS-----AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           G  ++     A   A    D         + ++++Y    +                   
Sbjct: 163 GQGDTHFDFLALSAAETDPDTRTGLLQSFDHLLKKYPNNGQ------------------- 203

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                LL  ++L     G    +    +E      + +   +  ++ L S  +  +A  +
Sbjct: 204 -----LLFGKALLLQQDGRPDEALTL-LEDNSASRHEVAPLLLRSRLLQSMKRSDEALPL 257

Query: 283 LEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L+   K   HP+     +A     +              L +   +  +    ++ + LE
Sbjct: 258 LKAGIKE--HPDDKRVRLAYARLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLE 315

Query: 338 MGSIDQAHAKAMLAMKIA 355
             + D+A       ++  
Sbjct: 316 AQAWDEARIYLEELVERD 333


>gi|306825323|ref|ZP_07458665.1| tetratricopeptide (TPR) domain protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304432759|gb|EFM35733.1| tetratricopeptide (TPR) domain protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 418

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 98/290 (33%), Gaps = 48/290 (16%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152
           ++    N+  A      ++ +  ++   L   L+  +   E   ++A EKL   L     
Sbjct: 81  IASEDGNVEEAFAYLEEITSESDWYVSALA--LKADLYQLEGLTDVAREKLLEALNYSDD 138

Query: 153 REFAVYSLYFESCRIGDLNSAQR-YATKALDISPDAPWVTEAVVQQ----YVLAKEWSRA 207
               V+ L      +G+   A + YA   LD          +  Q+    Y    ++  A
Sbjct: 139 SLL-VFGLAELDSELGNYQEAIQGYAQ--LDNRSIYEQTGVSTYQRIGYAYAQLGKFEAA 195

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
             FL +  +   E++   A  L +   +  +    +  +        +  +        +
Sbjct: 196 TEFLEKALE--LEYDDQTAFELASLYFDQEEYQKSVLYFKQIDT---ISPDFEGYEYGYS 250

Query: 268 KSLISQNKKRKAEVILEKIWKVNP----------------H-PEIANIYTHLLSENTVG- 309
           ++L  +++  +A  I++K  + NP                H P  A  +     E+    
Sbjct: 251 QALHKEHQVEEALRIVKKGLQKNPFETRLLLAASQFSYELHDPSAAEQFLLTAKEDAEDT 310

Query: 310 ---------------KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
                          + +  + L+    E++ +  ++++   E+  +D+A
Sbjct: 311 EEIFLRLATIYMEQERHEDIIALQSQEPENLLTKWMIARSYQEIEDLDKA 360


>gi|301107089|ref|XP_002902627.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262098501|gb|EEY56553.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1347

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 55/184 (29%), Gaps = 38/184 (20%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++ D+  A +   +ALD+          +V   +  +   ++  AI  L+     +  + 
Sbjct: 652 QLNDIVEATKTVREALDVFRGTSEEVRVLVANSELAIKRGDYDAAIAMLSSVPVGSPAFT 711

Query: 223 RNRAI------------------------------LLIARSLENADKGDMIASYHDAIES 252
           + + +                                ++ +        +  +      +
Sbjct: 712 KAQMVKADIYLQYRKDKHLYARCYQELVAINPCHATHVSLAEAYLRIQMLDEAVQSFERA 771

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307
             L       +    + LIS++   KA    E   K+ P       ++A +Y  L   + 
Sbjct: 772 KALSPGDPTIAGRIGRVLISKHDYLKAVDYYETALKMAPGNLVLRKDLAELYAKLRHFDQ 831

Query: 308 VGKL 311
             ++
Sbjct: 832 ALRV 835


>gi|255263412|ref|ZP_05342754.1| tetratricopeptide repeat domain protein [Thalassiobium sp. R2A62]
 gi|255105747|gb|EET48421.1| tetratricopeptide repeat domain protein [Thalassiobium sp. R2A62]
          Length = 714

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 14/197 (7%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQI 149
           GLM++   ++ LA K+    ++ H   +  L +         +R++  A + + + +   
Sbjct: 487 GLMALREGDMALAEKLILPAAKGH--PDNALFHKRCADFYFTKRKWGQAIKAIDQAIALE 544

Query: 150 PATREF-AVYSLYF--ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           P T  F A   L       R G   +        L I P   ++    ++     +    
Sbjct: 545 PRTALFQAFKGLIQVHAKDRKGAATTHTTVLDTGLQI-PGLFFLAGEALEAAKQPQA--- 600

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
               +  K  +    +  R + L     +    GD  A+      +L+  D         
Sbjct: 601 -AAKMVAKGLHLAPMDWKRQVALATLERDL---GDTDAATKRMQWTLQWADERPPVVKTL 656

Query: 267 AKSLISQNKKRKAEVIL 283
              L      ++A  IL
Sbjct: 657 TDLLTDAGDPQEALKIL 673


>gi|171911005|ref|ZP_02926475.1| hypothetical protein VspiD_07515 [Verrucomicrobium spinosum DSM
           4136]
          Length = 866

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
           +A+       +  T    YL      ++AL +  +  A ++    L+  +      Y L 
Sbjct: 154 VAQFYAPAKKKDRTLLEAYLA---GGELALQKSDFAKAADEFRAGLKEHSQNNDLRYGLA 210

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             + +  D   +   A + ++ +P        + +  + A++++ A   L+      ++ 
Sbjct: 211 R-AFQSSDRKQSLTLAQQVVESNPSHAGALLLLAEHSIGAEQFAEADKALDAVTSVNEDH 269

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
               A+  +  +L +  + +  ++   A+E+               + L    + ++A  
Sbjct: 270 PEAWAMRSVLATLVSNREKEAASARKQALEAWAQNPE---VDYVIGRCLSRAYRFQEASD 326

Query: 282 ILEKIWKVNP 291
            L +  K++P
Sbjct: 327 HLREAVKMDP 336


>gi|50760089|ref|XP_417895.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 188

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 37/97 (38%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD+++A    ++A+ + P+         Q   L  + + A+  L+   +  +   R
Sbjct: 58  AAESGDVSAALERFSEAIRLLPERASAYNNRAQALRLKGDVAGALRDLDAAIRLGRGCGR 117

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
                L+ R L +  +     +  D  ++ +L     
Sbjct: 118 AVCQSLVQRGLIHRLQAREDDARRDFQQAARLGSAFA 154


>gi|82778477|ref|YP_404826.1| lipoprotein NlpI [Shigella dysenteriae Sd197]
 gi|81242625|gb|ABB63335.1| putative control proteins [Shigella dysenteriae Sd197]
          Length = 294

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|148254358|ref|YP_001238943.1| hypothetical protein BBta_2910 [Bradyrhizobium sp. BTAi1]
 gi|146406531|gb|ABQ35037.1| hypothetical protein BBta_2910 [Bradyrhizobium sp. BTAi1]
          Length = 358

 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 46/144 (31%), Gaps = 30/144 (20%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT---------------- 209
           R+GDL+ A     +A+ ++P    +     +       W RA+                 
Sbjct: 187 RLGDLDGAIADFDEAVRLAPRNADIYRYRARDLGRRGRWERALADYDRAIRLDPNNPALF 246

Query: 210 -----------FLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHDAIESLKL 255
                       L+    +     R     A L   R      KG    +  D  ++LKL
Sbjct: 247 HDRGLALQQQGELDGALIDLDRAVRMSFSDARLYSDRGAVWLAKGRYDRALADFNQALKL 306

Query: 256 CDNSIMASICAAKSLISQNKKRKA 279
                +A+    ++L  + ++R A
Sbjct: 307 DPALAVAAARRDEALDRKREQRMA 330


>gi|332293376|ref|YP_004431985.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332171462|gb|AEE20717.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 418

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 91/299 (30%), Gaps = 43/299 (14%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNE---YLVYLLEVQIA-----LAERQYNIAHEKLEM 145
           +I + +   A+ +           +E       LL+ Q               A      
Sbjct: 30  AIKSGSYTEAKSLLGAAEALTADMDEKTKEKFMLLKAQAYLGVDNQNPADLEKAATAFAD 89

Query: 146 MLQIPATREF--AVYSL-------YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
           +     T E    + ++               D  SA     KA ++S       + V  
Sbjct: 90  LKDTKYTSEADAGLANVTNAYINGAVADQNKEDYASAATKLEKAYNLSKK-----DTVYL 144

Query: 197 QYVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
            +  +     K++  A+ +   + K+     R  + +         +           + 
Sbjct: 145 YFAASNAINGKDYDTALGYYE-QLKDLGFQGREVSYVATNVETSEVENFPSKQERDLQVL 203

Query: 252 SLKL--------CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANI 298
           +              S   +   A   IS+++  KA   +    K NP   +     A+I
Sbjct: 204 AKTHVKPEEQLGDSKSAEIAKNIALIYISKDENEKALAAMADARKENPDDILLLRSEADI 263

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           Y  +   +   ++    ++ E +  + E L  +   + + G+ ++A    M A+++ P 
Sbjct: 264 YLKMKKMDKYQEV--IAKVLEKDPNNPELLYNLGVSSDQQGNKEKAKEYYMKAVELDPT 320


>gi|325118385|emb|CBZ53936.1| hypothetical protein NCLIV_037180 [Neospora caninum Liverpool]
          Length = 685

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 22/261 (8%)

Query: 165 CRIGDLNSAQRYATKALDISPDAP-----------WVTEAVVQQYVLAKEWSRAITFLNQ 213
              GD++  +    +AL   P              W+  A+ +  + AK+  R      +
Sbjct: 356 ESRGDIDRIRNVYERALANVPPVLEKRCWKRYVYIWICYALFE-ELQAKDMERCRQVYQK 414

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
             +       + A +    +     + D+  +      ++  C       +  A+  +  
Sbjct: 415 MLEVIPHKKFSFAKIWSLYASFEVRQLDLNKARLIFGRAIAEC-GKPKIFVAYAQLELRL 473

Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV--I 330
               +   I  K  +++P +P        L  E    +  RA  L E+     E  +  +
Sbjct: 474 GNIDRCRKIYAKFIELHPFNPRAWIAMIDL--EVLAEEQARARALCELAVGMEEMDMPEL 531

Query: 331 VSKIALEM----GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           + K  ++M    G++D+A +     ++     ++F   A  E     +  +     +  +
Sbjct: 532 LWKAYIDMEVGWGAVDRARSLYERLLEKTQHVKVFKSFADFEWRIVEDLARARKVLERGI 591

Query: 387 HAMPDPLWISDDGYLSSVWLP 407
               +  W  D   L   WL 
Sbjct: 592 EVCKENSWDEDRASLLEHWLA 612


>gi|171316159|ref|ZP_02905383.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
 gi|171098668|gb|EDT43463.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
          Length = 636

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L  A+     AL  +P                 + + A   + +      E   
Sbjct: 35  AHRAGRLAEAEHGYRAALGTNPADADALHLFGVLRHQQGQHAEAADLVGRAV----ELRP 90

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +         G +  +      +L L     +A      +  +  +   A    
Sbjct: 91  GDAALQLNLGNALKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAALQRHEDAVDAF 150

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++ P     H  + N    L   +    L    R  E+      +   ++     M
Sbjct: 151 GRALRLTPDDASIHNNLGNALNALGRHD--DALAAFHRALELRPGHAGAHNNLAMALNAM 208

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D A A    A+   PR
Sbjct: 209 GRADDAIAHFQAAIAAQPR 227


>gi|41322914|ref|NP_958785.1| plectin isoform 1g [Homo sapiens]
 gi|40849942|gb|AAR95683.1| plectin 10 [Homo sapiens]
          Length = 4551

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1407 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1466

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1467 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1509

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1510 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1562

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1563 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1610


>gi|313199857|ref|YP_004038515.1| hypothetical protein MPQ_0089 [Methylovorus sp. MP688]
 gi|312439173|gb|ADQ83279.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
          Length = 381

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 1/106 (0%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L+    A        A ++  M+LQ  +    A+  +   + + G    A+ + +K L+
Sbjct: 197 NLIAAYKAWQAGDIASAQKQYRMVLQSDSGNVDALLGMAAIALQQGRQADARGWYSKVLE 256

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + P  P    A++     A +   + + L        E     A+L
Sbjct: 257 LDPRNPTAQSALIGI-GEAADPLGSESALKNLLAQQPEAAHLHAML 301


>gi|302915999|ref|XP_003051810.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732749|gb|EEU46097.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 258

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              ++ R   L+   K S E+ +   +  LE   +    A+     +        LL A 
Sbjct: 15  AKDRMARFKALQARAKTSAETNLK--EATLESQRLATDPAQLTALHRKHAIASHKLLKAD 72

Query: 367 IEQANSHNTDKILYW 381
           +E+A   + ++   W
Sbjct: 73  VEEA-GEDFERKRAW 86


>gi|315499317|ref|YP_004088121.1| thioredoxin [Asticcacaulis excentricus CB 48]
 gi|315417329|gb|ADU13970.1| thioredoxin [Asticcacaulis excentricus CB 48]
          Length = 291

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 50/135 (37%), Gaps = 4/135 (2%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A+ L A+S+E  D G  + +Y   ++       ++ A    AK  +   +  +A+ +L
Sbjct: 123 EDALALAAQSMEQGDLGGAMEAYSFVLDQ---DPQNLKAIAGVAKMYMKVGQPEQAKAVL 179

Query: 284 EKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           ++        +I  +   L  ++    +L         +     +   +++     G + 
Sbjct: 180 DQAPADAKDADIQGLRAALELADGAPTQLDGLRARLAADPADHAARYDLARGLAGQGELP 239

Query: 343 QAHAKAMLAMKIAPR 357
            A  + +  +K  P 
Sbjct: 240 AAIDELLAIIKAEPD 254


>gi|72388472|ref|XP_844660.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62360137|gb|AAX80557.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70801193|gb|AAZ11101.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
            927/4 GUTat10.1]
          Length = 1378

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 84/283 (29%), Gaps = 21/283 (7%)

Query: 99   NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
                ARK     + +     E      E + A  + +   A +K E         E A  
Sbjct: 769  EEEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEEEAARKRAEEEAAR 828

Query: 159  SLYFE--SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                E  + +  +  +A++ A +                ++        +A     +KK 
Sbjct: 829  KRAEEEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEEEAAR---KKAEEEAARKKA 885

Query: 217  NAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
              +   +     A    A       + +  A+   A  + KL           A+  + +
Sbjct: 886  EEEAARKKAEEEAARKKAEEEAARKRAEEEAARKKAERARKLA---------EARKTLRK 936

Query: 274  NKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330
               + A  + EK+ +     +          + +E    ++K     E +  E     + 
Sbjct: 937  RANKGARRMAEKVSRNQLQSDAWTKKEEAERMKAEEDAERMKAEEDAERMKAEEDAERMK 996

Query: 331  VSKIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANS 372
              + A  M + ++A   KA    +    +E    +   E+A  
Sbjct: 997  AEEEAERMKAEEEAERMKAEEDAERMKAEEEAERMKAEEEAER 1039


>gi|90021783|ref|YP_527610.1| tetratricopeptide repeat protein [Saccharophagus degradans 2-40]
 gi|89951383|gb|ABD81398.1| conserved hypothetical protein [Saccharophagus degradans 2-40]
          Length = 401

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 9/129 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDI----SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           L  +  R G L+ A+    +  D     +P      E +++ Y   +EW  AI   ++  
Sbjct: 119 LALDYLRSGLLDRAEMLLKELADAPKISNPMRKRALECLIELYQDMREWLSAIDVADRLT 178

Query: 216 KNA-----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                    +W + +A      +     + D + +      +++   +   AS+ +A+  
Sbjct: 179 ARKFSGPADKWRQQQAHYACEIAQTAITQKDWLTARRWVRTAMRHDKDCARASLLSAQLD 238

Query: 271 ISQNKKRKA 279
           I+Q +  KA
Sbjct: 239 IAQKEYAKA 247


>gi|16125706|ref|NP_420270.1| flagellin modification protein FlmG [Caulobacter crescentus CB15]
 gi|221234461|ref|YP_002516897.1| FlbA protein [Caulobacter crescentus NA1000]
 gi|2506426|sp|P21296|FLBA_CAUCR RecName: Full=Protein flbA
 gi|896458|gb|AAC62523.1| FlbA [Caulobacter crescentus CB15]
 gi|13422826|gb|AAK23438.1| flagellin modification protein FlmG [Caulobacter crescentus CB15]
 gi|220963633|gb|ACL94989.1| FlbA protein [Caulobacter crescentus NA1000]
          Length = 596

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 74/235 (31%), Gaps = 16/235 (6%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREF-AVYSLYF--ESCRIGDLNSAQRYATKALDISP 185
           IA A      A     +      T+       L    ++ ++ D   A + A K L+   
Sbjct: 29  IADAMGDSASAEALERLNRAAQDTKNVDNAKHLARAIQAVQLQDYAKADKLALKLLEKDE 88

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                   +        +++ ++           +        +       A + +M   
Sbjct: 89  RLGLAWHILAIAREKTGDFASSLRAYEAALALLPDHGP-----VAGDLGRLAFRMNMPEL 143

Query: 246 YHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
                   +L   + +  +   A +L   N++ +A  +L+     N  PE A ++  L +
Sbjct: 144 AAKFFAHYRLARPDDVEGANNLACALRELNRESEAIEVLKAALGAN--PEAAVLWNTLGT 201

Query: 305 -----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                 +  G +        +  +  ++    +   L++G I+ A A    AM+ 
Sbjct: 202 VLCNIGDAAGSIVFFDESLRLAPDFSKAYHNRAFARLDLGEIEAALADCEAAMRS 256


>gi|83950073|ref|ZP_00958806.1| lipoprotein, putative [Roseovarius nubinhibens ISM]
 gi|83837972|gb|EAP77268.1| lipoprotein, putative [Roseovarius nubinhibens ISM]
          Length = 265

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 29/109 (26%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              N A    +        R      L     R G    A     K +            
Sbjct: 34  GDPNEAVTYFQRATGEQPDRIDLQRGLAKSLIRAGRHTEAVSAWQKVVAHKDVTDDDRVE 93

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +    +   +W  A   LN      + + R R   ++A S ++  K D 
Sbjct: 94  LADALIRNGDWKAAEKTLNTVPPTVETFKRYRLEAMVADSNKDWKKADS 142


>gi|238788172|ref|ZP_04631967.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           frederiksenii ATCC 33641]
 gi|238723759|gb|EEQ15404.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           frederiksenii ATCC 33641]
          Length = 244

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+   N A + LE  +        A   + F   RIG+  +A++   +A+
Sbjct: 30  TRLQLGLEYLAQGDLNAARQNLEKAVAADPQDYRAQLGMAFYEQRIGENAAAEQRYQQAM 89

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +    +        ++         A++ D
Sbjct: 90  KLAPGNGTVMNNYGAFLCSLGQYVPAQQQFSAAVLSPDYGQVADSLENAGYCFLRANQND 149

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 150 --QARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 189


>gi|194098185|ref|YP_002001233.1| putative periplasmic protein [Neisseria gonorrhoeae NCCP11945]
 gi|240117577|ref|ZP_04731639.1| putative periplasmic protein [Neisseria gonorrhoeae PID1]
 gi|254493352|ref|ZP_05106523.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|260440893|ref|ZP_05794709.1| putative periplasmic protein [Neisseria gonorrhoeae DGI2]
 gi|268596486|ref|ZP_06130653.1| periplasmic protein [Neisseria gonorrhoeae FA19]
 gi|268603280|ref|ZP_06137447.1| periplasmic protein [Neisseria gonorrhoeae PID1]
 gi|268683982|ref|ZP_06150844.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
 gi|291044217|ref|ZP_06569926.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|193933475|gb|ACF29299.1| putative periplasmic protein [Neisseria gonorrhoeae NCCP11945]
 gi|226512392|gb|EEH61737.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|268550274|gb|EEZ45293.1| periplasmic protein [Neisseria gonorrhoeae FA19]
 gi|268587411|gb|EEZ52087.1| periplasmic protein [Neisseria gonorrhoeae PID1]
 gi|268624266|gb|EEZ56666.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
 gi|291011111|gb|EFE03107.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 614

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 131 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 184

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 185 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 244

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 245 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 297

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 298 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 352

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 353 YADRRDYAKVRQWLKK-VSAP 372


>gi|188533172|ref|YP_001906969.1| Probable fimbrial biogenesis protein [Erwinia tasmaniensis Et1/99]
 gi|188028214|emb|CAO96072.1| Probable fimbrial biogenesis protein [Erwinia tasmaniensis Et1/99]
          Length = 243

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 65/174 (37%), Gaps = 11/174 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            ++GD++ AQ++  +AL ++P   +V            ++  A T  +     A      
Sbjct: 72  QQMGDISMAQQHYHRALTLAPQNVYVLNNYGAFLCGLGQYDAAQTQFS--LARAVPVKGL 129

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVIL 283
            A  +        + G    +     ++++            A++     K R++   +L
Sbjct: 130 YADSVENSGYCFLNAGQQDKARVALADAVQTDP--AKGLPMLAEAERRLGKGRRSESRLL 187

Query: 284 EKIWKVNPHPEIAN-IYTHLLSENTVGK---LKRA-LRLEEINKESVESLVIVS 332
             +++ N  P  A  ++  +       +   +KR   +L +I  +S++    ++
Sbjct: 188 LDVYQHN-FPVSAESLWLEIRFAAQAKRPDDVKRYGGQLAQIFPQSIQYQHFLA 240


>gi|182414137|ref|YP_001819203.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177841351|gb|ACB75603.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 475

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 54/179 (30%), Gaps = 7/179 (3%)

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +    A E +   A              +M A+      +  L      A       L 
Sbjct: 273 ERWLLRAIELSPKPAAYYRQLGKFYTRTENMSAARRAFEHATALAPEDSDAWALLVNLLK 332

Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326
           S  ++  A   L++  +  P     H  +  +            +    R +++    V 
Sbjct: 333 SAGERPAAYSALDRGLRNRPDSRALHHALGQMLAE--DGRYAPAIAEFQRAKQLQPTEVS 390

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           + V ++ +   +G I+    +   A+ + P   + L++   +        +   W + A
Sbjct: 391 AYVEIALVHFRLGEIEAGMDEMRAALAVQPDHPVALVMLGRDAIARGEEAQAREWIRRA 449



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 32/233 (13%)

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAI---TFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           + P       A +        +  AI     L + + +   W    A +L          
Sbjct: 65  LHPQRSLAELARL--CHANGFFDEAILCYETLQRLQPDEARWPHLHAAILAT-------N 115

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILEKIWKVNPHPEI 295
           G +  +      S +L  + + A +     L+  N+  +AE     +L+K+    P+  +
Sbjct: 116 GQLDEAAPLYRRSAELAPDYLPARLRLGDVLLKANRLSEAEQAYRGVLQKL-ASEPYAML 174

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML----- 350
                 +  ++     ++       N E V  L +++ +    G  D+A+          
Sbjct: 175 GLARCAIARDDWESARQQLQGCIAANPEFVGGLSLMATVHEHFGEPDEANRIREHVNKRE 234

Query: 351 ----------AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                     A+         L +A        +      W   A+   P P 
Sbjct: 235 FVDLLDPWVEALLEDCYDHYRLSVAAAVAGFRGDHASAERWLLRAIELSPKPA 287


>gi|34540706|ref|NP_905185.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
 gi|34397020|gb|AAQ66084.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 579

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 53/142 (37%), Gaps = 20/142 (14%)

Query: 242 MIASYHDAIESLKLCDNSIM--ASICA--AKSLISQNKKRKAEVILEKIWKVNPHPE--- 294
              +Y  A +  + C       A++ +   K  I+  ++ +    LE+ +++  +P+   
Sbjct: 44  EQENYAAAFDIFRYCHRLNPNDAALLSELGKLYIAIGRQEEGTRYLEQAYRL--YPDNKN 101

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-----H 345
               +  +Y      +   +L     + E      E    ++ + ++ G ID+A      
Sbjct: 102 YGNILGAVYERQGRADDAVRL--YEEMSEQFPSEDELRFKLANMYVQAGEIDKAIYIYNR 159

Query: 346 AKAMLAMKIAPRKEIFLLLAQI 367
            +A  A+  A       + A++
Sbjct: 160 MEAQNAVNAADASNYAEIRARL 181


>gi|90425135|ref|YP_533505.1| type I restriction enzyme EcoKI subunit R [Rhodopseudomonas
           palustris BisB18]
 gi|90107149|gb|ABD89186.1| type III restriction enzyme, res subunit [Rhodopseudomonas
           palustris BisB18]
          Length = 1126

 Score = 37.6 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 7/93 (7%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           ++      +   +        +A       A+E +RA   L Q+     E       +  
Sbjct: 143 DATVALREEIAALGRRLTESEDAAAGAQREAEEHARARETLEQRLAREAEER----AIWE 198

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
             + +  ++   IA+   A++++        A+
Sbjct: 199 KLAQDIENEKAEIAARLAALQAV---AEHTPAA 228


>gi|324115231|gb|EGC09195.1| tetratricopeptide [Escherichia fergusonii B253]
 gi|325498746|gb|EGC96605.1| lipoprotein NlpI [Escherichia fergusonii ECD227]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|282164260|ref|YP_003356645.1| hypothetical protein MCP_1590 [Methanocella paludicola SANAE]
 gi|282156574|dbj|BAI61662.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 370

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 5/213 (2%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + + S         ++    L +  I     + + A       + +      A Y     
Sbjct: 134 KAISSIAMAVKIEPDDVQYLLEQGHILALAGRSDDALRSYTAAVVVDPASAEAHYWRASV 193

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G+ + A +    A+ I P        +   Y     +  AI         + +   
Sbjct: 194 LYDKGNYDEAVKENITAIRIDPGFAMAHMDLALIYFERGMFDEAIDSYKAAVTASPD--N 251

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           + A + +  +L    K     +     +S+ L  + I A +   +       + +A    
Sbjct: 252 SDAYMGLGMAL--LQKKQYPTAAEALKKSIALKGDRIDARLDLGQCYEKMKMRNEAIDEY 309

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
           ++  ++NP   IA+ Y  +    T G+LK A  
Sbjct: 310 KEAVRINPGSAIAHNYLGIACART-GRLKTAQA 341


>gi|255634538|gb|ACU17632.1| unknown [Glycine max]
          Length = 230

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 39/79 (49%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            K +S AI +  +        +   +IL   R+  N   G++  +  D+ E+LKLC ++I
Sbjct: 46  KKHYSDAIDYYTRAIDQKALSDSETSILFANRAHVNLLLGNLRRALTDSNEALKLCPSNI 105

Query: 261 MASICAAKSLISQNKKRKA 279
            A   AAK+ +S N   +A
Sbjct: 106 KAIYRAAKASLSLNMLAEA 124


>gi|158293248|ref|XP_314563.4| AGAP010599-PA [Anopheles gambiae str. PEST]
 gi|157016867|gb|EAA09887.4| AGAP010599-PA [Anopheles gambiae str. PEST]
          Length = 663

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 84/240 (35%), Gaps = 31/240 (12%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  E  L   +T     Y+L       G  + A  Y  KAL+  P+     +A
Sbjct: 227 NRTKEAQEVYERALLYDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHE---QA 283

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKGDMIA 244
           ++   +L       +  L + +       R   +L              +   D  +   
Sbjct: 284 LLNSAIL-------LQELGRPELRKIARERLLKLLAKDETNERVHFNLGMLAMDDRNTDE 336

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IAN 297
           + +    ++ L  +   A    A  L   ++  +A   L +   V  HP+       + +
Sbjct: 337 AENWFRRAVHLKQDFRSALFNLALLLADDHRPLEAAPFLNQ--LVKYHPDHIKGLILLGD 394

Query: 298 IYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           IY  ++   +         R+ +++  +++ L  +  + +E G + QA      A ++AP
Sbjct: 395 IYINNIKDLDAAENC--YKRILQLDPINIQGLHNLCVVYVERGKLLQAQDCLSHAHELAP 452


>gi|87311694|ref|ZP_01093810.1| hypothetical protein DSM3645_06584 [Blastopirellula marina DSM
           3645]
 gi|87285588|gb|EAQ77506.1| hypothetical protein DSM3645_06584 [Blastopirellula marina DSM
           3645]
          Length = 1270

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 6/103 (5%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           ++   GD   AQR A  AL   P+ P  T           +   ++  +N + +   + +
Sbjct: 329 QALATGDAVGAQRLADAALQRDPNNPQATLVRKAALSQIGD-DDSLRMVNAQAQPGADLD 387

Query: 223 RNRAILLIARSLENADKGDMIA-----SYHDAIESLKLCDNSI 260
            +    L     +   + ++I      +  +A E + +    +
Sbjct: 388 ADEGNFLSEVQRQQIRQAEVIKIEVENALANAREQMGVQPAMV 430


>gi|296133597|ref|YP_003640844.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR]
 gi|296032175|gb|ADG82943.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR]
          Length = 215

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 48/141 (34%), Gaps = 4/141 (2%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176
            ++   ++    + + ++QY +A  +    L +      A Y+L     ++G ++ A++ 
Sbjct: 67  PDDPQAHIDLGWVYMQKKQYTLAEREYLAALNLDRNNISAQYNLALLKIQVGKIDEAKKI 126

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +     P+       +   Y     + +A+      +K         A L+       
Sbjct: 127 LEQIKRKRPEDLKARATLGYVYAEKGLYEKALAEFRLVEKYYPT----NADLMFQFGRVY 182

Query: 237 ADKGDMIASYHDAIESLKLCD 257
             +GD   +      +LK   
Sbjct: 183 EKQGDDAQAREYYYRALKFDP 203


>gi|259910225|ref|YP_002650581.1| Cellulose synthase operon C domain protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224965847|emb|CAX57380.1| Cellulose synthase operon C domain protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283480336|emb|CAY76252.1| cellulose synthase operon protein C [Erwinia pyrifoliae DSM 12163]
          Length = 1355

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 84/263 (31%), Gaps = 49/263 (18%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL     + A    + +LQ       A+  L + + R GD + A  Y  +A  +  +  
Sbjct: 278 SALNNGDVSAAQSAFDRVLQNNPQDADALAGLGYAAQRSGDYSQAAEYLQRAAKLGGNDS 337

Query: 189 ------------WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
                       +   A  QQ + + + ++A++ L+     A+      A L  A +L  
Sbjct: 338 QQRQQQADDARFYARLASAQQALKSGDSAQALS-LSAPLTQAEGEKGLAAKLFRADALRL 396

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAK-----SLISQNKKRKAEVILEKIWKVNP 291
             + D     + A+ +         A+   A+      L  QN+  +A  +L  +     
Sbjct: 397 NHQPDQAEQTYRAVLATD-------AANRQAQEGLFYVLHQQNRTAEANTLLASL----- 444

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            P             T   L+R                  ++  L  G   +A       
Sbjct: 445 -PASVRQAVATRPVATSDPLRR-----------------EAQQRLAAGDTPRAIGILQQG 486

Query: 352 MKIAPRKEIFLL-LAQIEQANSH 373
           ++  P      L LA+I Q   +
Sbjct: 487 LQRFPGDGWLRLDLARIYQQQGN 509


>gi|145344374|ref|XP_001416709.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576935|gb|ABO95002.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 332

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 4/93 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            GD   A+ Y  +A    P      EA+            A+   N+         R   
Sbjct: 145 RGDRARAETYYARATKAKPGDALSWEALASNQYEDGRLDDALASYNEAL----NAVRQAP 200

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            L  +R   +  K D  A   DA ++LKL +N 
Sbjct: 201 GLYFSRGKVHRAKKDYGACVEDAQQALKLAENF 233


>gi|39942970|ref|XP_361022.1| hypothetical protein MGG_03565 [Magnaporthe oryzae 70-15]
 gi|145009872|gb|EDJ94528.1| hypothetical protein MGG_03565 [Magnaporthe oryzae 70-15]
          Length = 529

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 65/197 (32%), Gaps = 21/197 (10%)

Query: 93  MSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIP 150
           +++A A  +  +  + + ++      +  +  LL   Q  LA  + N A    +  +   
Sbjct: 7   VALATAGVLSPSTWLAAAITTDEIPSDLPVSQLLTTAQTHLARGETNDALVYYDAAIARD 66

Query: 151 ATREFAVYSLYFESCRIGDLNSA--QRYATKA----LDISPDAPWVTEAVVQQYVLAKEW 204
                          R     SA    +AT+     L++ P        + +    + +W
Sbjct: 67  PKDY------MTHFKRATTYLSAGRLSHATEGYNKVLELRPGFEGAHLQLAKIKQRSADW 120

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264
             A+       K A +      +L    + E A+      ++ D +++  +       +I
Sbjct: 121 DGALKDYKAAGKTAGQSREVDELLEAMGAAELAEAAAKEKNWDDCVQNAGV-------AI 173

Query: 265 CAAKSLISQNKKRKAEV 281
             A   ++  + R +  
Sbjct: 174 LVANRHLALRELRASCR 190


>gi|117923356|ref|YP_863973.1| tetratricopeptide TPR_4 [Magnetococcus sp. MC-1]
 gi|117607112|gb|ABK42567.1| Tetratricopeptide TPR_4 [Magnetococcus sp. MC-1]
          Length = 584

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP--ATREFAVYSLYFESCRIGDLNSA 173
            +   + L+  Q  LA  Q+  A  +    +++ P       A   +     ++G L+ A
Sbjct: 142 DHTPELVLMMAQAQLANGQFQEARGRFSRFLVENPGHPHAYIAQRGIGICELKLGALDRA 201

Query: 174 Q----RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           +     Y  +     PD  W+  A+ +  +    W  A   L Q  +  +     RAI  
Sbjct: 202 RLQLGLYRERPDRPEPDPEWI-LAMAELSLAQGGWEMARHGLKQLPEETRRSQPARAIFY 260

Query: 230 IARSLENADKGDMI 243
            A  ++ A+     
Sbjct: 261 RAVRMQVAEAAQTE 274


>gi|320103063|ref|YP_004178654.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319750345|gb|ADV62105.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 1534

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 26/209 (12%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEA---VVQQYVLAKEWSRAI--TFLNQKKKNA 218
             R G    A     + L+  P +  + +    V+   +  +  +RA+     N+ K + 
Sbjct: 645 KIRDGKAEEADALLAEFLETHPTSVKIAQTRAQVLADQLNRRHQARALLAETANRSKASG 704

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                     L   +L +   GD+ A      E  K   +S  A + A++  + +  + +
Sbjct: 705 P---------LAQLALMDLADGDLAAVESHIAEMRKRWPDSAAADLLASQLALVRGDRAE 755

Query: 279 AEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEIN---------KESVE 326
              +L +  + +P  +IA  +     L         +   +L   +           S  
Sbjct: 756 VSRLLAEAVRKDPTNKIALYWKANLDLAGGARDDAQEALNQLASADLTKEIEPGLSLSKA 815

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           + + +++ A   G++D+A  +    ++  
Sbjct: 816 AELSLARAAAREGNLDEALDRLRELIRED 844


>gi|317051708|ref|YP_004112824.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
           indicum S5]
 gi|316946792|gb|ADU66268.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurispirillum indicum S5]
          Length = 917

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 17/216 (7%)

Query: 56  ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA-----HNIPLARKMHSYV 110
           + L A+S   +           +       +      +++A       ++  A  +  Y 
Sbjct: 144 LYLRALSWKGIGDEQQSIEFFRRAARSASPEVAAESSLALATLLYNRGDMEYASFVRRYH 203

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGD 169
            +  T + +   +LL+        ++  +      +   P +          +E  R   
Sbjct: 204 ERTPTQNIQPAPWLLQQIALFDAGEFEESVRVARNLEGTPFSAHSLYFRGHAYEQLRE-- 261

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A     KA +           V++ Y   ++  R +     +   A +    RA++ 
Sbjct: 262 HEKAVESFEKAFEQ--GMSLAFTRVLEHYASQEDDRRVLGMAADRLDLADDGVARRAVVS 319

Query: 230 IARSLENADK-------GDMIASYHDAIESLKLCDN 258
            AR  +           G        A E+  +  +
Sbjct: 320 AARLGDMEAARFWLERIGSSTMKSSAAYEAYMVQPD 355


>gi|239998636|ref|ZP_04718560.1| putative periplasmic protein [Neisseria gonorrhoeae 35/02]
          Length = 612

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 129 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 182

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 183 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 242

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 243 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 295

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 296 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 350

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 351 YADRRDYAKVRQWLKK-VSAP 370


>gi|218259513|ref|ZP_03475226.1| hypothetical protein PRABACTJOHN_00884 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225044|gb|EEC97694.1| hypothetical protein PRABACTJOHN_00884 [Parabacteroides johnsonii
           DSM 18315]
          Length = 563

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 18/141 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+M+  A ++  A +M +  +         +   L   IAL +     A +       + 
Sbjct: 394 GMMAFRAGDLAKAEQMFNKSNSVKANPEANMNLGL---IALTKGDQAKAQQLFGSAAGVA 450

Query: 151 AT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  V  LY E    G+   A          S  +     A +   +L K++S+A  
Sbjct: 451 ELGEALGV--LYLE---QGEWAKA--------ANSFGSVKSNNAAL-AQILTKDYSKASQ 496

Query: 210 FLNQKKKNAKEWNRNRAILLI 230
            LN   K     +  +AI+  
Sbjct: 497 TLNAVAKPDATTSYLKAIVAA 517


>gi|160900813|ref|YP_001566395.1| type 11 methyltransferase [Delftia acidovorans SPH-1]
 gi|160366397|gb|ABX38010.1| Methyltransferase type 11 [Delftia acidovorans SPH-1]
          Length = 438

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 20/177 (11%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            +  + +    GD+  +     ++ +         + A           KA    E+ + 
Sbjct: 14  HLEMARQQISNGDLQKAALTLNKAHRKMPGDARVFMLAGLMAEKAGNLTKA----EEAFD 69

Query: 289 VNPHPEIANIYTHLLSENTVGKLKR---------ALRLEEINKESVESLVIVSKIALEMG 339
                E+A ++   L E  + + +R         A ++  I   + + L  V  IA   G
Sbjct: 70  RCV--ELAPMWGPGLLETALYRARRDQFDLAIEMAEKVARIEPRNPQVLAGVVDIAHRAG 127

Query: 340 SIDQAHAKAMLAMKIAPRKEIFL--LLAQI-EQANSHNTDKILYWTQSALHAMPDPL 393
           + + A       +++ P   +    L A + E      T+ +  W          P+
Sbjct: 128 NHEMAVLHLRRGLELFPNDAMLRQHLAADLGELGEH--TEALQIWNALVDEFPEQPV 182



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 45/150 (30%), Gaps = 6/150 (4%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++  A    +          +  V++L   +A        A E  +  +++       +
Sbjct: 25  GDLQKAA--LTLNKAHRKMPGDARVFMLAGLMAEKAGNLTKAEEAFDRCVELAPMWGPGL 82

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
                   R    + A   A K   I P  P V   VV     A     A   L+   + 
Sbjct: 83  LETALYRARRDQFDLAIEMAEKVARIEPRNPQVLAGVVDIAHRAGNHEMA--VLH--LRR 138

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYH 247
             E   N A+L    + +  + G+   +  
Sbjct: 139 GLELFPNDAMLRQHLAADLGELGEHTEALQ 168


>gi|86356520|ref|YP_468412.1| hypothetical protein RHE_CH00874 [Rhizobium etli CFN 42]
 gi|86280622|gb|ABC89685.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 610

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 58/253 (22%)

Query: 80  NYDKGYKALYTGLMS-------IAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQ 128
                 + L +  ++       +A  N   A K  +   +  +F  + +       L  +
Sbjct: 2   RQRLAIRLLTSAALAAVLSLGVVAGVNAEDAAKTAADAGKTDSFDADSVTTFSGAFLAAR 61

Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
            A  +  Y  A E  +  LQ     P  R      L       GD+    +YA   L   
Sbjct: 62  TADVDHDYETAIELYKKALQIEPGNPEIR----QRLMISLLLNGDIKEGVKYAND-LKGD 116

Query: 185 PDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIAR--------SLE 235
           P    +T  V     + + ++  A + L     N  +   N  +L  AR        +L 
Sbjct: 117 PSVERITTIVRGMDAVRRDDYKAAESILKYTGPNDLDRMMNDLLLAWARVGAGRGKEALA 176

Query: 236 NADK----------------------GDMIASYHDAIESL------KLCDNSIMASICA- 266
             +K                      GD+ ++     +++          ++ M ++ A 
Sbjct: 177 MVEKMKGPDWVRIFQNYNAGAIAVVTGDVKSARQHLNDAVLDKEGGATAPDTFMRAVMAL 236

Query: 267 AKSLISQNKKRKA 279
           A+   +Q  K+KA
Sbjct: 237 ARLEAAQGNKQKA 249


>gi|41322923|ref|NP_958786.1| plectin isoform 1a [Homo sapiens]
 gi|40849944|gb|AAR95684.1| plectin 11 [Homo sapiens]
          Length = 4547

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1403 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1462

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1463 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1505

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1506 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1558

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1559 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1606


>gi|41322916|ref|NP_958782.1| plectin isoform 1 [Homo sapiens]
 gi|209572726|sp|Q15149|PLEC_HUMAN RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName:
            Full=Hemidesmosomal protein 1; Short=HD1; AltName:
            Full=Plectin-1
 gi|40849936|gb|AAR95680.1| plectin 6 [Homo sapiens]
          Length = 4684

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1540 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1599

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1600 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1642

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1643 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1695

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1696 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1743


>gi|56967162|pdb|1XNF|A Chain A, Crystal Structure Of E.Coli Tpr-Protein Nlpi
 gi|56967163|pdb|1XNF|B Chain B, Crystal Structure Of E.Coli Tpr-Protein Nlpi
          Length = 275

 Score = 37.6 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 35  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDXPEVFNYLGIYLTQAGN 92

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 93  FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 140


>gi|320104238|ref|YP_004179829.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319751520|gb|ADV63280.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 1030

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 4/155 (2%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A         I      A+ +L     ++   + A     KAL ISPD       +  
Sbjct: 636 ERAVRAFGTARAIRPDNFAAINNLALALRKLKRFDEALILHRKALQISPDLALGRLNLAT 695

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                   + A   L        +      +LL + S     +         A    +L 
Sbjct: 696 CLSELGHHAEAENLLRSALSLEPD----NTLLLYSLSRVLFRQKRSAEVLEIARREAELQ 751

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +S    +  +  L    +  +A  + E+  ++ P
Sbjct: 752 PSSWRPLLLQSHLLREMGQDDEALTVTERAARLAP 786


>gi|300904349|ref|ZP_07122202.1| lipoprotein NlpI [Escherichia coli MS 84-1]
 gi|301301781|ref|ZP_07207915.1| lipoprotein NlpI [Escherichia coli MS 124-1]
 gi|300403700|gb|EFJ87238.1| lipoprotein NlpI [Escherichia coli MS 84-1]
 gi|300842762|gb|EFK70522.1| lipoprotein NlpI [Escherichia coli MS 124-1]
 gi|315257089|gb|EFU37057.1| lipoprotein NlpI [Escherichia coli MS 85-1]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|145341072|ref|XP_001415639.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575862|gb|ABO93931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 505

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 43/127 (33%), Gaps = 5/127 (3%)

Query: 129 IALAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKALD--IS 184
            A+    +  A +  + M+    P+    ++  +     +  + + A  Y  + L   I 
Sbjct: 172 AAMESGDHVYATKIFDDMVAGAEPSPDVLSLVYVLSACAKAKEADVAMEYFERGLKAGID 231

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
            D     +A+++    +     A+        +  +   +   LL++   + A +   + 
Sbjct: 232 YDIS-TIDALLKSCAKSGRAVDALEVFMDATAHGIKVRESTITLLLSAYQDIAAQPGQLE 290

Query: 245 SYHDAIE 251
                ++
Sbjct: 291 QALTIVD 297


>gi|86360453|ref|YP_472341.1| adenylate cyclase protein [Rhizobium etli CFN 42]
 gi|86284555|gb|ABC93614.1| probable adenylate cyclase protein [Rhizobium etli CFN 42]
          Length = 590

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 20/200 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAV-----VQQYVLAKEWS----RAITFLNQKKKNAKEWNR 223
           A+    +A+++ P+       +     +        WS    R+I    +    A   + 
Sbjct: 364 ARDLLQRAVELDPNFASAHAFLALTHGLDYL---NRWSVSPQRSIDQAEKTAMLAVARDD 420

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +  +   A S+         ++  +A  ++ L  N     +   ++L+   +  +A    
Sbjct: 421 SDPVAHWALSVVRLYSRQHDSAISEAERAIVLNPNFAEGQVSLGEALLYSGRSEEALACF 480

Query: 284 EKIWKVNPH-PEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           ++   +NP+ P+I     A  +  L       +L R       N  +  S  +++     
Sbjct: 481 DRARVLNPYFPDIVLHFQAWAWFQLRRYEEAVELLRQR--VSRNPVTDVSRALLAACYGH 538

Query: 338 MGSIDQAHAKAMLAMKIAPR 357
           +G +++A A     ++I P 
Sbjct: 539 LGRLEEARATWQEVLRINPD 558


>gi|82545597|ref|YP_409544.1| lipoprotein NlpI [Shigella boydii Sb227]
 gi|81247008|gb|ABB67716.1| putative control proteins [Shigella boydii Sb227]
 gi|320186652|gb|EFW61376.1| Lipoprotein nlpI precursor [Shigella flexneri CDC 796-83]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|41322912|ref|NP_958780.1| plectin isoform 1f [Homo sapiens]
 gi|40849932|gb|AAR95678.1| plectin 2 [Homo sapiens]
          Length = 4533

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1389 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1448

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1449 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1491

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1492 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1544

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1545 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1592


>gi|41322908|ref|NP_958781.1| plectin isoform 1e [Homo sapiens]
 gi|40849934|gb|AAR95679.1| plectin 3 [Homo sapiens]
          Length = 4525

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1381 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1440

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1441 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1483

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1484 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1536

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1537 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1584


>gi|41322919|ref|NP_958784.1| plectin isoform 1b [Homo sapiens]
 gi|40849940|gb|AAR95682.1| plectin 8 [Homo sapiens]
          Length = 4547

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1403 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1462

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1463 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1505

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1506 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1558

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1559 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1606


>gi|93005019|ref|YP_579456.1| tetratricopeptide TPR_2 [Psychrobacter cryohalolentis K5]
 gi|92392697|gb|ABE73972.1| Tetratricopeptide TPR_2 [Psychrobacter cryohalolentis K5]
          Length = 651

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 4/166 (2%)

Query: 223 RNRAILLIARSLENADKGDMIA-SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +  A  +  R+L  + + D +  S   A        + + A    A   +  +    A  
Sbjct: 155 KQDATAVFERALSLSLRNDRVEESLQFAKAWQDENPDHVPAWFYVAHLALRAHDYELAGE 214

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-VIVSKIALEMGS 340
            L +I   +P  +++ I   +   +   K +    L+ I  E   SL V+ + +  +   
Sbjct: 215 TLNRILSYDPRADLSEILIGIYPNSDDDKRELLAALQPIASEQNASLSVLKAGLLYQFNE 274

Query: 341 IDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILYWTQSA 385
            + A      A++  P    F  L A I +        I Y    A
Sbjct: 275 PEIAIVHINRAVERQPDYVPFITLKADILRKIETPEAVIEY-LSQA 319


>gi|327189640|gb|EGE56790.1| adenylate cyclase protein [Rhizobium etli CNPAF512]
          Length = 626

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 19/198 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++PL R +           +    +             + A    E  L +      A +
Sbjct: 390 DVPLRRILEMSARALALDPDLPEAHASHGLALHQSGYDDRAAAAFERALTLDPNLFEANF 449

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKEWSR-----A 207
                    G+   +  Y T+A +I PD              + ++V  + W+R     A
Sbjct: 450 HYARFFFMHGNFAESVHYFTRAAEIRPDDYVSPIHLMAAYHSLGRWVDRENWARLGLLRA 509

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              LN   +N+   +R         +L  A  GD   +   A  ++ +  + I+A    A
Sbjct: 510 ERALNLNPENSGPAHR--------GALALAHLGDAARARDWAARAIAIDPDDIVAQYNLA 561

Query: 268 KSLISQNKKRKAEVILEK 285
                      A  +LEK
Sbjct: 562 CVYSVLGDVDHAIDLLEK 579


>gi|238794832|ref|ZP_04638433.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           intermedia ATCC 29909]
 gi|238725845|gb|EEQ17398.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
           intermedia ATCC 29909]
          Length = 234

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L      LA+   N A + LE  ++       A   +     RIG+ ++A++   +A+
Sbjct: 20  TRLQLGLEYLAQGDLNAARQNLEKAVEADPQDYRAQLGMALYEQRIGENSAAEQRYQQAM 79

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
            ++P    V            ++  A    +             ++         A++ D
Sbjct: 80  KLAPGNGTVLNNYGAFLCGLGQYVPAQQQFSAAALLPDYGQVADSLENAGYCFLRANQND 139

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              +      +LK   +     +  A+    +  + +A+++L
Sbjct: 140 --QARILLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 179


>gi|238062343|ref|ZP_04607052.1| tetratricopeptide TPR_2 [Micromonospora sp. ATCC 39149]
 gi|237884154|gb|EEP72982.1| tetratricopeptide TPR_2 [Micromonospora sp. ATCC 39149]
          Length = 730

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 4/162 (2%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
            +   A E  +  L +      A Y+L      + D   A     + L++ P+       
Sbjct: 523 GRNAEAIEDYQQTLLLSPPFPEAYYNLADARLELDDAEGALADLDRVLELDPEHVSAWVN 582

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                    +   A   +        +     A LL  R    A++G+  A++     +L
Sbjct: 583 RAGLRCDLDDLDGAWADVTAGLAIEPD----NAHLLCLRGRVLAERGETEAAHQALTAAL 638

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
            +      A                A   L++  ++   PEI
Sbjct: 639 GVDAGLAEAWALRGGLRYGSGDLTTAITDLDRALELLDTPEI 680


>gi|262197084|ref|YP_003268293.1| hypothetical protein Hoch_3901 [Haliangium ochraceum DSM 14365]
 gi|262080431|gb|ACY16400.1| Tetratricopeptide repeat protein [Haliangium ochraceum DSM 14365]
          Length = 2235

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 41/157 (26%), Gaps = 9/157 (5%)

Query: 166  RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
            ++G    A+ +   AL+I P +      +        +W  A   L +  +         
Sbjct: 1688 QLGQRARAREHLRAALEIVPGSSDCLRRLADLCCEDGDWQDAAELLLRWVRLEPVVELRC 1747

Query: 226  AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA------ 279
             +     +L      D   +     + L L      A     +        + A      
Sbjct: 1748 EVFFRLGTLYADHLSDSRTAVKAFKQVLNLSPEHRGALAALVRFGAELGDYKLAIAACER 1807

Query: 280  -EVILEKIWKVNPH-PEIANIY-THLLSENTVGKLKR 313
               I E      PH   +A +Y           +  R
Sbjct: 1808 LVRISEDAEAKVPHLKRLAELYQASGEGGARAERTLR 1844


>gi|52080766|ref|YP_079557.1| TPR repeat-containing protein [Bacillus licheniformis ATCC 14580]
 gi|52786138|ref|YP_091967.1| YpiA [Bacillus licheniformis ATCC 14580]
 gi|319645275|ref|ZP_07999508.1| hypothetical protein HMPREF1012_00541 [Bacillus sp. BT1B_CT2]
 gi|52003977|gb|AAU23919.1| TPR-repeat containing conserved hypothetical protein [Bacillus
           licheniformis ATCC 14580]
 gi|52348640|gb|AAU41274.1| YpiA [Bacillus licheniformis ATCC 14580]
 gi|317393084|gb|EFV73878.1| hypothetical protein HMPREF1012_00541 [Bacillus sp. BT1B_CT2]
          Length = 424

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 92/256 (35%), Gaps = 20/256 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---E 163
              +  Q    +E ++     ++   +  Y  A  + +   +          ++Y    E
Sbjct: 122 QKLLKAQAILPDEPVIDFALGELYFTQGAYGKAVRQFKKAAEEE--AVIGGVNVYQRLAE 179

Query: 164 SC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           S    G    A  +  KA+  +P+       +      A + +       ++    KE +
Sbjct: 180 SLSSSGAFEEALEWYEKAVKENPE----PNTLFGFGFTALK-AGYPKTAIKQLTELKEMD 234

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              + L    +     +G    ++  A E +++ + +    + AAK+ +   +  +A+ +
Sbjct: 235 PAYSSLYKPLANSFETEGLYEEAFETAKEGIRVDEFNKELYLSAAKAALKTKRHSEAKEL 294

Query: 283 LEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
           L +   ++P      H  +A ++     + ++ +L R +R  +  ++  +    ++    
Sbjct: 295 LREALALDPGYLEAVHTLLA-LFLEEEDDESIIELVREVR--KYGEDDPKFSWHLASAFA 351

Query: 337 EMGSIDQAHAKAMLAM 352
              + D+A  +   A 
Sbjct: 352 RTEAYDKAREEYENAF 367


>gi|51894458|ref|YP_077149.1| hypothetical protein STH3324 [Symbiobacterium thermophilum IAM
           14863]
 gi|51858147|dbj|BAD42305.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 181

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 6/140 (4%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQR 175
           H+E    L E     A      A E+   +L    T  +A   +    +  +GDL++A+ 
Sbjct: 3   HDERSAILKEADDLYARGNLEEALERYRRVLAEDETVAWAHSRTGAILAQ-LGDLDAAEV 61

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +  +A+++ P  P     +         +  A+    +  +   +       L  A    
Sbjct: 62  HLRRAIELDPKLPQAYSNLGNLDYSRGAYEAALEKYKKAVELDPDNPTFYENLHAAYKRL 121

Query: 236 NADKGDMIASYHDAIESLKL 255
               G +  +     ++ +L
Sbjct: 122 ----GKVYEAVEAIKKAQRL 137


>gi|299065274|emb|CBJ36442.1| conserved protein of unknown function, tpr repeat domain [Ralstonia
           solanacearum CMR15]
          Length = 700

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 56/225 (24%), Gaps = 44/225 (19%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R    + A   A +A+ ++P +     A+        +   A+    Q  +        
Sbjct: 262 KRAERPDEALAVARQAVVLAPRSAEAHHALATALQTLGQTDEALPHFEQAARLPGAVAEE 321

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVIL 283
               L+ R++   + G   A+     ++L     S+ A    A +   +           
Sbjct: 322 ---ALVGRAILLMEAGRRDAARAAFDQALAQFPGSVQALAGRADARTFTAGD-------- 370

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                    P+IA +   L          R                 + K  L++    +
Sbjct: 371 ---------PDIAALEACLADGERRSLRDRISA-----------HFALGKAYLDLQDPAR 410

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           A        +       +            +      W +    A
Sbjct: 411 AFHHLDAGNRQKRSTFTY------------DAAASSRWMERIAEA 443


>gi|322420255|ref|YP_004199478.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18]
 gi|320126642|gb|ADW14202.1| tetratricopeptide TPR_2 repeat protein [Geobacter sp. M18]
          Length = 1001

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 85/248 (34%), Gaps = 41/248 (16%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
             Q     +  L  +L  +          A   L+ M                      D
Sbjct: 198 AQQNQFLRDPRL-RVLLARAYYLSGALPEARAILDDM----------HRGDL-------D 239

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
             +   YA  A         +   +++     + ++  +  L Q+ ++A       A  L
Sbjct: 240 KEALVAYADIAHKD--GNLALALKLLRAAEETEGYAGGLESLKQEVESALHAQ---AEPL 294

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           + R+    D  DM  +   A + L+LC N    +  A + ++  +  R+A   +  +W+ 
Sbjct: 295 LERAFSALDCADMSEAELLARQVLQLCPN----NQRAREIVVHIDSGRQAAE-IAALWES 349

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE--SLVIVSKIALEMGSIDQAHAK 347
                +A        E    +L+   +L   ++E+ E  + +I S+ + +   + QA  +
Sbjct: 350 -----LAQA------EGCEARLELLEQLSGRDRENRERITGLIASEKSRQKKELAQARLE 398

Query: 348 AMLAMKIA 355
            + A+   
Sbjct: 399 RLRALAKE 406


>gi|197103485|ref|YP_002128862.1| thioredoxin [Phenylobacterium zucineum HLK1]
 gi|196476905|gb|ACG76433.1| thioredoxin [Phenylobacterium zucineum HLK1]
          Length = 303

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 47/128 (36%), Gaps = 1/128 (0%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           ++  + E+ + GDM  +     + L+    ++ A    A+         +A  +LE   +
Sbjct: 137 MLEMARESLELGDMGGAAQAYAQILQADPQNVKALGGLARLYQQSGDLERAREVLEMAPE 196

Query: 289 VNPHPEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
               P++ A      L+E    +     +    + +  E+    +K     G + +A  +
Sbjct: 197 GAKDPDLDAVRAALALAEEAPSETAEFEQRLAADPDDHEARFEFAKALAGSGRMMEAVDE 256

Query: 348 AMLAMKIA 355
            +  ++  
Sbjct: 257 LIEIVRRD 264


>gi|41322910|ref|NP_958783.1| plectin isoform 1d [Homo sapiens]
 gi|40849938|gb|AAR95681.1| plectin 7 [Homo sapiens]
          Length = 4515

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1371 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1430

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1431 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1473

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1474 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1526

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1527 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1574


>gi|85704918|ref|ZP_01036019.1| Tetratricopeptide [Roseovarius sp. 217]
 gi|85670736|gb|EAQ25596.1| Tetratricopeptide [Roseovarius sp. 217]
          Length = 808

 Score = 37.6 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 87/271 (32%), Gaps = 16/271 (5%)

Query: 117 HNEYLVYLLEVQIALAERQYNI-AH---EKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172
            N+     L  Q        ++ A      +E     P         L         L +
Sbjct: 407 PNDAQAMTLMAQAHERAGNRDLMAEMLSRAVEASRNAPDESLRYARHL----ISEESLRT 462

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A+     AL ++PD   +   + + Y+  ++W R    +   ++         A  L AR
Sbjct: 463 AETVLINALRLAPDNTALLSGLGEIYMREQDWPRVTQVIETLRRQDNAPAEGIANELTAR 522

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            L   D+   + S+ D++ + +       A+    ++ ++Q     A     +  + NP 
Sbjct: 523 QLAAQDREGELLSFLDSL-ASEGAQGMGAAATIV-RTRLAQGDTEGALHYARETLEANPG 580

Query: 293 PEIANIYT----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            ++   +       ++  T+        L + + +     + +  I     +   A    
Sbjct: 581 -DLNARFLMASVQAVAGETLAAEAAFRDLAKESPQDQRFWLALYNIHAVQENAQAARQAI 639

Query: 349 MLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378
           +  +  +P    +   LA I ++       I
Sbjct: 640 LDGLAASPENLRLNWALAGILESEGDLQGAI 670


>gi|323457103|gb|EGB12969.1| hypothetical protein AURANDRAFT_60819 [Aureococcus anophagefferens]
          Length = 883

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 4/132 (3%)

Query: 126 EVQIALAERQ---YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
             + AL  R+      A E  +        R   V     ++    D  +    +  A+ 
Sbjct: 376 AAKAALVARRVSSLVAAAEACDASSAEARARSAFVRGRALDAGDAYDPAAEAALSR-AVK 434

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++PD      A+   +    + + A       +  A +    RA+  +AR+      G  
Sbjct: 435 LAPDDVAAWNALGHAFWKKGDTAGAGDCYEAARSRAGDAVSARALSQLARAGPRPADGAF 494

Query: 243 IASYHDAIESLK 254
             S   A ++L+
Sbjct: 495 DRSVALAKDALR 506


>gi|302551745|ref|ZP_07304087.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302469363|gb|EFL32456.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 482

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 80/266 (30%), Gaps = 51/266 (19%)

Query: 136 YNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
           Y  A + L   +   P     AV  L   +    D ++A+R+   AL + P        +
Sbjct: 121 YPRAEKALRTSLRARPKRNTEAVAGLAALANARRDFSAARRWGEAALKLEPRKWTTYPLL 180

Query: 195 VQQYVLAKEWSRAITFLNQ-----------KKKNAKEWNR-------------------- 223
           +  Y    E   A   L++            +  A   +R                    
Sbjct: 181 IDAYTGLGEHESAERMLDRLTELRSGPAVLARAAAVYRDRGRPEDAAASLADAAAGARTP 240

Query: 224 -NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
             RA  L        ++GD+  +     E+++L  +   A     ++L +  +  +A   
Sbjct: 241 AERAAYLERAGQLAWERGDLQDALRHFQEAVRLDPDQRAAQAGQGRALAALGRTSEALNA 300

Query: 283 LEKIWKVNPHP----EIANIYTHLLSENTV--------GKLKRALRLEEINKESVESLVI 330
                   P P    E+  +Y  L               +++RA+          +  ++
Sbjct: 301 YRVALAKQPCPRYALELGELYESLGMPEAALVQYDLLRERVRRAVA------GGADEELV 354

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           + +   + G    A  +     +  P
Sbjct: 355 LGQFEADHGDPRAAVRRLRAEWRRQP 380


>gi|156553082|ref|XP_001599457.1| PREDICTED: similar to NFAT, putative [Nasonia vitripennis]
          Length = 1372

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 18/121 (14%)

Query: 366 QIEQANSHNTDKILYWTQSA-LHAMPDPLWISDDGYLSSVWLPLSPISKTLCYF------ 418
           +IE A          W   A L A    +           W P+ P +     F      
Sbjct: 545 KIESAQPGPGRG--QWRSRAGLEAASGYVPRC-------SWKPVLPAAAGSASFLGAIQP 595

Query: 419 --EWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHP 476
                +P  SPE + S+     +  A P   +    +        +   +    +   +P
Sbjct: 596 AASATVPAVSPEVLKSDPSPPPVTAASPVTPVMLWSSQSSNQGASADVMMPPPTNMVTNP 655

Query: 477 L 477
           +
Sbjct: 656 M 656


>gi|154490374|ref|ZP_02030635.1| hypothetical protein PARMER_00607 [Parabacteroides merdae ATCC
           43184]
 gi|154088985|gb|EDN88029.1| hypothetical protein PARMER_00607 [Parabacteroides merdae ATCC
           43184]
          Length = 563

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 18/141 (12%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+M+  A ++  A +M +  +         +   L   IAL +     A +       + 
Sbjct: 394 GMMAFRAGDLAKAEQMFNKSNSVKANPEANMNLGL---IALTKGDQAKAQQLFGSAAGVA 450

Query: 151 AT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                  V  LY E    G+   A          S  +     A +   +L K++S+A  
Sbjct: 451 ELGEALGV--LYLE---QGEWAKA--------ANSFGSVKSNNAAL-AQILTKDYSKASQ 496

Query: 210 FLNQKKKNAKEWNRNRAILLI 230
            LN   K     +  +AI+  
Sbjct: 497 TLNAVAKPDATTSYLKAIVAA 517


>gi|94971220|ref|YP_593268.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553270|gb|ABF43194.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 515

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 6/135 (4%)

Query: 125 LEVQI--ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           LE Q   A     Y  A       L    T   A   L        +L +A+  A  AL 
Sbjct: 23  LEQQALDAWRTYDYPTAERLYRQALTANPTSGDAHGGLVRTLLNEKNLQAARDAANTALR 82

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +PD+  V  A    +        A        + + + + N A      S       + 
Sbjct: 83  AAPDSAAVQAASGDVFFRDGRIEDA----EIAYRRSAKLDDNCARAWHGLSQIAQITSNY 138

Query: 243 IASYHDAIESLKLCD 257
            ++  D  ++ +L  
Sbjct: 139 RSARRDIFKAHELDP 153


>gi|15599862|ref|NP_253356.1| hypothetical protein PA4667 [Pseudomonas aeruginosa PAO1]
 gi|218893764|ref|YP_002442633.1| hypothetical protein PLES_50531 [Pseudomonas aeruginosa LESB58]
 gi|254244441|ref|ZP_04937763.1| hypothetical protein PA2G_05299 [Pseudomonas aeruginosa 2192]
 gi|12231050|sp|P42810|Y4667_PSEAE RecName: Full=TPR repeat-containing protein PA4667
 gi|9950922|gb|AAG08054.1|AE004880_10 hypothetical protein PA4667 [Pseudomonas aeruginosa PAO1]
 gi|126197819|gb|EAZ61882.1| hypothetical protein PA2G_05299 [Pseudomonas aeruginosa 2192]
 gi|218773992|emb|CAW29807.1| hypothetical protein PLES_50531 [Pseudomonas aeruginosa LESB58]
          Length = 590

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 43/258 (16%)

Query: 109 YVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            +++      E L   LL  + A        A                     Y E    
Sbjct: 108 RIAEYLGADQEALDTSLLWARSAPDNLDAQRAAAIQLARAGRYEESMV-----YMEKVLN 162

Query: 168 GDLNS-----AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           G  ++     A   A    D         + ++++Y    +                   
Sbjct: 163 GQGDTHFDFLALSAAETDPDTRAGLLQSFDHLLKKYPNNGQ------------------- 203

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                LL  ++L     G    +    +E      + +   +  ++ L S  +  +A  +
Sbjct: 204 -----LLFGKALLLQQDGRPDEALTL-LEDNSASRHEVAPLLLRSRLLQSMKRSDEALPL 257

Query: 283 LEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L+   K   HP+     +A     +              L +   +  +    ++ + LE
Sbjct: 258 LKAGIKE--HPDDKRVRLAYARLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLE 315

Query: 338 MGSIDQAHAKAMLAMKIA 355
             + D+A       ++  
Sbjct: 316 AQAWDEARIYLEELVERD 333


>gi|322488776|emb|CBZ24023.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 2840

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 8/101 (7%)

Query: 162 FESCRIGDLNSAQRYATK-----ALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQK 214
            E  R      A+R A +     AL+ +            ++Q     E       L Q 
Sbjct: 620 LEQARREAKEQARREAEEQARREALEQARREAEEQARREALEQARREAEEQARREALEQA 679

Query: 215 KKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIESLK 254
           ++ AKE  R  A     R +LE A +     +  +A+E  +
Sbjct: 680 RREAKEQARREAEEQARREALEQARREAEEQARREALEQAR 720


>gi|317124691|ref|YP_004098803.1| hypothetical protein Intca_1563 [Intrasporangium calvum DSM 43043]
 gi|315588779|gb|ADU48076.1| hypothetical protein Intca_1563 [Intrasporangium calvum DSM 43043]
          Length = 379

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 29/187 (15%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D ++A  +A  A+  +   P   EA+        +W+RA+T     ++ +   +    ++
Sbjct: 183 DPSAALAHAETAVRRAGRVPAAREALGLVAYRMGDWARALTEFRTVRRLSGSSHLLPLMV 242

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
              R+L    K   +A   +A  +    D+ +  +I  +       +   A   L     
Sbjct: 243 DCERALGRHAKALELAQSDEA--ANLAIDDRVELAIVTSGLRRDLGQLDAAIAGLS---- 296

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                ++                    RL      +       +   L  G    A    
Sbjct: 297 -----DL------------------VRRLSPNRPSAARLYYAYADAKLAAGDAAGAREWF 333

Query: 349 MLAMKIA 355
             A    
Sbjct: 334 ARAADAD 340


>gi|307111000|gb|EFN59235.1| hypothetical protein CHLNCDRAFT_138219 [Chlorella variabilis]
          Length = 843

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 5/129 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
             G  ++A     +    +P A W           A+ +   +T      K     +   
Sbjct: 12  AAGKADTALTLCREIASRAPQARWAHRRCGYLLAAAERFEEGVTAFQTALKT----DTKD 67

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A      +    + G   A+      +L+L      A+I      ++     +     E 
Sbjct: 68  AAAWEGLASCYQNLGRFTAALKAYTRALELQPGRPYAAIQCGTIHMALGSFAEGSAQFEA 127

Query: 286 IWKVNP-HP 293
             ++ P HP
Sbjct: 128 ALRIAPDHP 136


>gi|240115290|ref|ZP_04729352.1| putative periplasmic protein [Neisseria gonorrhoeae PID18]
          Length = 612

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 129 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 182

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 183 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 242

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 243 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 295

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 296 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 350

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 351 YADRRDYAKVRQWLKK-VSAP 370


>gi|188994860|ref|YP_001929112.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594540|dbj|BAG33515.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
          Length = 393

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 52/142 (36%), Gaps = 20/142 (14%)

Query: 242 MIASYHDAIESLKLCDNSIM--ASICA--AKSLISQNKKRKAEVILEKIWKVNPHPE--- 294
              +Y  A +  + C       A++ +   K   +  ++ +    LE+ +++  +P+   
Sbjct: 44  EQENYAAAFDIFRYCHRLNPNDAALLSELGKLYFAIGRQEEGTRYLEQAYRL--YPDNKN 101

Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-----H 345
               +  +Y      +   +L     + E      E    ++ + ++ G ID+A      
Sbjct: 102 YGNILGAVYERQGRADDAVRL--YEEMSEQFPSEDELRFKLANMYVQAGEIDKAIYIYNR 159

Query: 346 AKAMLAMKIAPRKEIFLLLAQI 367
            +A  A+  A       + A++
Sbjct: 160 MEAQNAVNAADASNYAEIRARL 181


>gi|86748901|ref|YP_485397.1| TPR repeat-containing protein [Rhodopseudomonas palustris HaA2]
 gi|86571929|gb|ABD06486.1| TPR repeat protein [Rhodopseudomonas palustris HaA2]
          Length = 269

 Score = 37.6 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           +         D   +   A E  +       A++   ++L +  ++ +A  +LEK    N
Sbjct: 43  SLGARAEAPADPGRAAEIAGERYRSNPKDPGAALAYGQALRAIGQRAQAVAMLEKATLAN 102

Query: 291 P-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIAL--EMGSIDQAHA 346
           P +  +   Y   L++N          L   +  ++ +  ++  + A+  +MG  D+A  
Sbjct: 103 PGNKAVLAGYGRALADNGNFSAA-FEALSNAHSPDNPDWRILSVQGAVLDQMGRSDEARR 161

Query: 347 KAMLAMKIAP 356
               A+++AP
Sbjct: 162 YYASALRLAP 171


>gi|332998805|gb|EGK18401.1| tetratricopeptide repeat family protein [Shigella flexneri VA-6]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|304313946|ref|YP_003849093.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302587405|gb|ADL57780.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 377

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 77/242 (31%), Gaps = 20/242 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
              I     ++N +       L+I     + +  L     R+G  + A     +A+ I P
Sbjct: 129 RADILFDSGKFNKSRLCYTAALRIDPDDVYVLNRLADNLTRLGRFDEALENYRRAIRIDP 188

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           + P++   +    + A E   A+   ++  K       +   LL  R +        + +
Sbjct: 189 ENPYIWNNMAITLLNAGEVDEALEASSRALKIRP----HDPALLYWRGVMLEVAEKPVEA 244

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILEKIWKVNPHPEIANIYTH 301
                ++++    +          L    +   A       LE   +    P + N    
Sbjct: 245 LEFYEKAIERDPRNAELWTARGNLLSELGRMEDALESYNNALELALEDEQDPHLWN---- 300

Query: 302 LLSENTVGKLKRALRLE-------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               N + +L+R            E++ E+      +    LE+   ++A      A ++
Sbjct: 301 -RKGNALLELERFEEAAECYRRAIEMDPENDVYWTNLGVALLELERFEEALDSFSRAFQL 359

Query: 355 AP 356
            P
Sbjct: 360 NP 361


>gi|240013879|ref|ZP_04720792.1| hypothetical protein NgonD_04393 [Neisseria gonorrhoeae DGI18]
 gi|240121449|ref|ZP_04734411.1| hypothetical protein NgonPI_06728 [Neisseria gonorrhoeae PID24-1]
          Length = 497

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+     
Sbjct: 90  ARQWYKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNP 146

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 147 RLL---LEAGRFYAEDNQNKESAAAFEKV 172


>gi|222110588|ref|YP_002552852.1| tetratricopeptide repeat-containing protein [Acidovorax ebreus
           TPSY]
 gi|221730032|gb|ACM32852.1| Tetratricopeptide TPR_4 [Acidovorax ebreus TPSY]
          Length = 385

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIG----DLNSAQRYATKALDISP 185
            +YN A    E +L         RE A ++L  +  + G      ++ +R    A +   
Sbjct: 85  GEYNRAVRVHEHLLSRGDLSRADRERAQHALALDFLKAGLLDRAEDALRRLEGSAFE--- 141

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                  A++  Y  +++W +A     +       +++   A  L  ++L  A  G++ A
Sbjct: 142 --GQARMALLAIYERSRDWPQASDIARRMHDAQQGDFSTRLAHYLCEQALALAAHGELPA 199

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +     ++L     +  A I  A+    Q +   A
Sbjct: 200 AQALLEQALATAPQAPRARIELARLQQRQGQPEAA 234


>gi|170744477|ref|YP_001773132.1| TPR repeat-containing adenylate/guanylate cyclase [Methylobacterium
           sp. 4-46]
 gi|168198751|gb|ACA20698.1| adenylate/guanylate cyclase with TPR repeats [Methylobacterium sp.
           4-46]
          Length = 664

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 74/220 (33%), Gaps = 21/220 (9%)

Query: 147 LQIPATREFAVYS--LYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           L  P +RE  + +   + ++  R G+   A+    + L ++ +  W + A        + 
Sbjct: 420 LNRPLSRESLLRAREAFEQALARDGESVRARVGLARTLALAANFGWSSAASDDLARAERL 479

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A+               N A+    +      +     +      ++    N   A 
Sbjct: 480 IDGALA-----------ARPNEAMAYCVKGEILRGRRQYEEAIAAHQAAIARNANLAPAY 528

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LR 316
              A +++   +  KA  + E+  +++PH  + +++   L E    +   A         
Sbjct: 529 GSMANAVLQLGQADKAYALAERAVRLSPHDPLLSLWAATLCEAAERRTMHAAAITWCSRS 588

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           L   + + V   + ++    E G  D+A       + + P
Sbjct: 589 LVAPSPQPVLIYLHLASAYAETGRTDEARRSIAQLLALRP 628


>gi|47607492|ref|NP_000436.2| plectin isoform 1c [Homo sapiens]
 gi|40849930|gb|AAR95677.1| plectin 1 [Homo sapiens]
          Length = 4574

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1430 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1489

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1490 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1532

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1533 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1585

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1586 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1633


>gi|307293851|ref|ZP_07573695.1| glycosyl transferase family 2 [Sphingobium chlorophenolicum L-1]
 gi|306880002|gb|EFN11219.1| glycosyl transferase family 2 [Sphingobium chlorophenolicum L-1]
          Length = 717

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 32/115 (27%), Gaps = 6/115 (5%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
              +   A   G  ++   +   A ++  Y S+      E  V            + + A
Sbjct: 6   RRRRSIVAARAGGEAMEKGDWAEASRLFQYASRLRPERVELQVQ--HAHALKEMGRKDEA 63

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
                            +Y L     + GD   A     + L+ +PD      A+
Sbjct: 64  LVAYARASGSDD----GLYHLGLLRLQSGDRTGAMDAWVRLLERTPDHEAALIAL 114


>gi|288920211|ref|ZP_06414526.1| TPR repeat-containing protein [Frankia sp. EUN1f]
 gi|288348389|gb|EFC82651.1| TPR repeat-containing protein [Frankia sp. EUN1f]
          Length = 690

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 74/235 (31%), Gaps = 18/235 (7%)

Query: 169 DLNSAQRYATKALDISPD--APWVTEAVVQQYV--LAKEWSRAITFLNQKKKNAKEWNRN 224
           DL +A+ +  +AL   P           ++  +  + + W  A     +  +  +  +  
Sbjct: 435 DLPTARTHVEEALRRDPGRSLTRAGAQTLRAQMCEMQRRWQDAEACYREAAEIYESLSDT 494

Query: 225 RAI--LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
            +   +L A      + G    +  D   + +            A +L    +   A  I
Sbjct: 495 ESSGRMLAALGRVLLESGQTTRAVEDLQAASERLPGDAEVQAALAHALWRTGQPWAAAAI 554

Query: 283 LEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKE---SVESLVIVSKI 334
              +      P+  +         +   +    ++   RL     +           +  
Sbjct: 555 FSAVLTFA--PDSGDALAGRARLRVELGDDAAAMQDFERLARSAAQVVAQPSMRAARAVA 612

Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHA 388
               G + +A  ++ +A++ AP    +   +A++ +A   + +      + AL A
Sbjct: 613 LARRGQVAEAANESSVALREAPDSGPVLWHVAEVIRA-RGDDEGADGLLRRALDA 666


>gi|302868442|ref|YP_003837079.1| transcriptional activator domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302571301|gb|ADL47503.1| transcriptional activator domain [Micromonospora aurantiaca ATCC
           27029]
          Length = 999

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 39/324 (12%)

Query: 62  SRFFLSCPAMLFHMLHKR-NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +RF       L    H+R    +   A   GL +  A N   A+             +  
Sbjct: 664 ARFVWQLTDALRAWFHQRGRRAEWLSAATGGLAAAQAANDLTAQASMHLS---IALAHVT 720

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                E +  L +     AH++       P  R   + +L     R+G+  +A   A ++
Sbjct: 721 AGRYEEARQHLLDGLRINAHDRW------PEGRTALLNNLSAVHQRLGNPRAAIECAQQS 774

Query: 181 LDISPDAP-WVTEAVVQQYVLAKEWS-RAITFLNQKKKNAKE------WNRNRAILLIAR 232
           L+++        EA+    +    W   A++  +Q  ++A           N A+LL+  
Sbjct: 775 LELNRQYRNDGGEAMSLANLGFAHWQLGALSQADQHIRDALACAERSGSRYNEAVLLVDL 834

Query: 233 SLENADKGDMIAS---YHDAIESLK-LCDNSIMASICAAKSLI---------SQNKKRKA 279
           +    D+GD  A+   Y  A+ + + L      A+  + ++L+         +    R+A
Sbjct: 835 AGIRRDRGDREAAEELYDRALVANRDLGYQYGEATALSGRALLWSMTGRAPRACADARQA 894

Query: 280 EVILE-------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI-V 331
             + +       + W    +  +              +L   L  +        S ++ +
Sbjct: 895 VALTQEIGDAGTEAWAREAYGRVLLAAERPAEAAEEHRLALDLARQTRFVWCEASALVGL 954

Query: 332 SKIALEMGSIDQAHAKAMLAMKIA 355
           + + L     D A   A  A+++A
Sbjct: 955 AAVCLATEQPDVAREHAEAALRMA 978


>gi|170732709|ref|YP_001764656.1| cellulose synthase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169815951|gb|ACA90534.1| cellulose synthase operon C domain protein [Burkholderia
           cenocepacia MC0-3]
          Length = 1297

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 22/234 (9%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
            +   D  Y A   GL ++A  ++  A  + +  ++  +   + L       + L E ++
Sbjct: 291 RRLERDPDYIAQQRGLQALARGDLAAADPLLARAARTRSDDADALGG--LGLLRLREGRH 348

Query: 137 NIAHEKLE---MMLQIPATREFAV------YSLY---FESCRIGDLNSAQRYATKALDIS 184
           + A                +   +      + L     E+   G    A+R A  AL + 
Sbjct: 349 DEARALFTRAAARATDQRGKWQGLARTAQFWGLLAQGREAASAGRPRDAERAARAALAMQ 408

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILL--IARSLENADK 239
           PD P     +    +  ++W+RA   L      +  +    R+ A L     R+      
Sbjct: 409 PDNPDAKLQLADALLAQRDWARAEPLLRGLLAARSPSLSAVRDTATLYENTGRADRIGPL 468

Query: 240 GDMIASYHDAIESLKLCDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNP 291
            D +       +  +  D+     + A  A++L  +  +  A    E      P
Sbjct: 469 LDALQGRVTGADDRRTLDDLR-GDVLANEARALAEKGARGPAAQRYEAAVHAAP 521


>gi|91225904|ref|ZP_01260873.1| hypothetical protein V12G01_15600 [Vibrio alginolyticus 12G01]
 gi|91189554|gb|EAS75830.1| hypothetical protein V12G01_15600 [Vibrio alginolyticus 12G01]
          Length = 1254

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 92/277 (33%), Gaps = 24/277 (8%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
            YL +    + + Q+  A    +  +Q+  ++ +A  SL        +  +A++   +AL
Sbjct: 390 AYLDQGDALVEKGQFKQAESAYQKAIQVDKSQPYAYSSLGSLYLVQENYAAAEKVFKQAL 449

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFL------NQKKKNAKEWNRNRAILLIARSLE 235
            +           +   +  ++WS A           QK    K  +    ++L  R   
Sbjct: 450 QLDSSNSSALRGRLDVRIQQQDWSGAEALACSYSAPQQKVVAEKIASIKSEVILT-RLRI 508

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE 294
              + D         E + L   S    +  A  + S   K +A+ ++   W  + + PE
Sbjct: 509 AIAQNDQATMKASVEELIALQPTSPWLRLDIADVIHSMGDKVRADTLMSD-WATSSNDPE 567

Query: 295 IANIYT-HLLSENTVGKLKRALRLEEINKESVESLVI--VSKIALEMGSIDQAHAKAMLA 351
           +   Y  +L  +  V   +    LE I +  +   +   ++++ L+    D         
Sbjct: 568 MKFAYALYLAKDFNVN--EAIAELESIAQHDMTDAMQRNLTRLKLDAQLRDIQTRYLASP 625

Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
             +         +A +    S    +I       + A
Sbjct: 626 ESV---------MATLRALESDYQGQIQP-LARLVSA 652


>gi|320194649|gb|EFW69279.1| Lipoprotein nlpI precursor [Escherichia coli WV_060327]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|313159704|gb|EFR59061.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 262

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G+   +     +AL+ +P++      +      A+ + +A   + Q   +    +  RA 
Sbjct: 37  GNYEKSIERYERALEAAPESFEARYNLGNALYKAERFDKAEQTMRQAAADTLRTDDERAQ 96

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDN 258
                      +     +     +SL+L  +
Sbjct: 97  AFYNLGNAQFKQQKYKEALESYKQSLRLNPS 127


>gi|291295437|ref|YP_003506835.1| TPR repeat-containing protein [Meiothermus ruber DSM 1279]
 gi|290470396|gb|ADD27815.1| TPR repeat-containing protein [Meiothermus ruber DSM 1279]
          Length = 792

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 77/248 (31%), Gaps = 34/248 (13%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
              E +   LE +          A +    +  +     F V     ++  +     AQ 
Sbjct: 373 LRGEPIQTALEAR---LLGLSEQARQVYMSLALLETPDLFLVR----QALNLSASEMAQA 425

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARS 233
             T    +S     ++ AV  +    + +      L  +            +A+ L  R+
Sbjct: 426 VDT---LLSAGLIDLSGAVFGREAAQR-YIAERPTLEARLSLGLARLLKPQQALPLYRRA 481

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292
               +  D+                   A I  A+ LI +   R+A   L++     P H
Sbjct: 482 KALLEDADL--------------PRLQQAYITWAQELICRGFPRRAAEELKEA----PNH 523

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           PEI        +    G  K AL +     ++ E L + + +   +G  D+A A A  A+
Sbjct: 524 PEI--TLLRARAFERAGLYKEALEVMRFMPDTPEHLALKATLYHRLGRADEAQACAERAL 581

Query: 353 KIAPRKEI 360
                   
Sbjct: 582 SGGIEARA 589


>gi|254445210|ref|ZP_05058686.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259518|gb|EDY83826.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 754

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 81/251 (32%), Gaps = 32/251 (12%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           YF +    DL+ A  +  +A+ + P       A+    +    W          + N  E
Sbjct: 306 YFSAKTSDDLDRALEFLQEAIRLDPAFADAHAALALVEMDRGWWQG---LPTAGQANRAE 362

Query: 221 WNRNRAI--------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI- 271
               +A+          +A ++     G+  A+      + +L  NS       +  L  
Sbjct: 363 GPARKALELNPLLSEAHLAVAMVEKGHGNDEAALDAFRRAYELGPNSTSVLHEYSSFLRW 422

Query: 272 SQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESL 328
                  A  +L+K  +V+P   P   ++ + L+ +      L+  L L       V   
Sbjct: 423 DLGDPAGALRLLQKAVEVDPLNEPLKVSLASALVGDFRAAEALEILLPLASELANDVSFW 482

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK--------EIFLLLAQIEQANSHNTDKILY 380
             + +  LE G  D+A       + + P          + + +L           +  ++
Sbjct: 483 STLEETYLESGRYDEAIRANRQLLVLEPENPNAAQNLFQCYQIL---------GDESAIH 533

Query: 381 WTQSALHAMPD 391
           W +  L A   
Sbjct: 534 WLERYLEASQG 544


>gi|157866577|ref|XP_001687680.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68125294|emb|CAJ03051.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 4165

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 40/136 (29%), Gaps = 16/136 (11%)

Query: 119  EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            + L  +   Q    E       +    +         A+  LY E        +A + A 
Sbjct: 3693 DALHAMQRAQAVRDEGHRTAFEDVTRKLADAEQAAHLALDDLYRERETRERTAAALQEAQ 3752

Query: 179  KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
                             ++  L + +   +  L+  + +A E +R R  +   +    A 
Sbjct: 3753 S----------------EKEELHRRFEAVLEKLHLAELDADEHSRQRDCIEALKLELEAA 3796

Query: 239  KGDMIASYHDAIESLK 254
            +     +   A ++ +
Sbjct: 3797 RTQQQEAAAKAEDAFR 3812


>gi|47215918|emb|CAG00393.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1526

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 91/278 (32%), Gaps = 41/278 (14%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKL-EMM 146
            G   +    +  A      VS +    +  L   +LL   + +A+   ++A E   + +
Sbjct: 388 KGRAHLNKGQVDQA----VQVSSELMSSSPNLAQGFLLRGLVQIAQGHQHLAEESFQKAI 443

Query: 147 LQIPATR----EFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--------TEA 193
            Q P           +Y    E+ R  D + A  +  KA  + P+             E 
Sbjct: 444 SQSPECGEYYFLLGKLYWDMGEATR-NDRSKAHTHFLKAAKLDPNLGCAFRYLGHYYQEV 502

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                     + +A         +  +     A + ++   ++ D    +A     +E+ 
Sbjct: 503 ACDHVRARGCYKKAFDL------DIDDAESGAAAVDLSMKSDDMDTA--LAVLESVVENA 554

Query: 254 KLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSEN 306
                S   A I      +   + +KA   L+   + +P  +      +   Y +  S  
Sbjct: 555 --TPGSAKWAWIRRGLYYLKVGEHQKAIADLQAALRADPE-DWVCWECLGEAYLNRRSFT 611

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               LK   + ++++  S+ S+   + I   +G   +A
Sbjct: 612 AA--LKAFGKAQQLHPSSIYSVYQAAAIKQTLGKFKEA 647


>gi|14591585|ref|NP_143667.1| hypothetical protein PH1836 [Pyrococcus horikoshii OT3]
 gi|3258273|dbj|BAA30956.1| 338aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 338

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 64/214 (29%), Gaps = 42/214 (19%)

Query: 12  SLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCP-- 69
           +L++  F  +S Y   +SITW            L I+   +  +I++ A   +++S P  
Sbjct: 63  ALLLLPFTAISAYGTYLSITWQK----------LGIVGGIIVFFIIVAAFGIWYISEPDL 112

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY-LLE-- 126
            +          +         +M         A + +            YL    LE  
Sbjct: 113 TIADRFRSAEKLE---------MM----GRYKQAARKYEKEGNYRKAAEMYLKLGWLESA 159

Query: 127 VQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFES----CRIGDLNSAQRYATKAL 181
                    Y  A E  E + +    T          E+     + GD+  A +   +  
Sbjct: 160 AWAYEKAGDYAKAAELYEKLYEKEKDTYYL------KEAHEYWKKAGDMERAAKALERYA 213

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
              P   W  E V + Y    +  +A     +  
Sbjct: 214 QEEP---WFWEDVAKLYEELGDEEKAREAWEKAL 244


>gi|14195008|sp|Q9JI55|PLEC_CRIGR RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName: Full=300 kDa
            intermediate filament-associated protein; AltName:
            Full=IFAP300; AltName: Full=Plectin-1
 gi|7839650|gb|AAF70372.1| plectin [Cricetulus griseus]
          Length = 4473

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 46/161 (28%), Gaps = 23/161 (14%)

Query: 101  PLARKMHSY--VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157
             +AR+  +     QQ     E L +L +   A  + +           M      R   +
Sbjct: 1326 EVARREEAAVNAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1385

Query: 158  YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
                 E  R    G+L + +  A +A      A                       L ++
Sbjct: 1386 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQ 1428

Query: 215  KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             ++  +  R     L  R    A+          A+E L+L
Sbjct: 1429 VQDESQRKRQAEAELALRVKAQAEAAQEKQRALQALEELRL 1469


>gi|89067513|ref|ZP_01155026.1| hypothetical protein OG2516_11751 [Oceanicola granulosus HTCC2516]
 gi|89047082|gb|EAR53136.1| hypothetical protein OG2516_11751 [Oceanicola granulosus HTCC2516]
          Length = 462

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 49/159 (30%), Gaps = 13/159 (8%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
             +           L   + +    GD   +       L+   +             S+N
Sbjct: 1   MADGTPEEPRTLADLRRAATDAHQSGDTARALRLYAAFLQRVPDDAGIWSNLGALHRSEN 60

Query: 275 KKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTV--GKLKRALRLEEINKESVESLV 329
           +  +A     + +++   P+ A++   Y + LS+       L    RL E   +  +   
Sbjct: 61  RLDQAVRAHLRAYELT--PDSASVLNNYANALSDIGRYDEALALRERLVEYRPDDAQQKS 118

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
           ++ +     G   +A      A+   P        A+IE
Sbjct: 119 LIGRALRGKGQYRKAVRYLEGALAEHPDD------AEIE 151


>gi|15803705|ref|NP_289739.1| lipoprotein NlpI [Escherichia coli O157:H7 EDL933]
 gi|15833298|ref|NP_312071.1| lipoprotein NlpI [Escherichia coli O157:H7 str. Sakai]
 gi|16131055|ref|NP_417632.1| lipoprotein involved in osmotic sensitivity and filamentation
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26249745|ref|NP_755785.1| lipoprotein NlpI [Escherichia coli CFT073]
 gi|30064503|ref|NP_838674.1| lipoprotein NlpI [Shigella flexneri 2a str. 2457T]
 gi|56480277|ref|NP_708964.2| lipoprotein NlpI [Shigella flexneri 2a str. 301]
 gi|74313700|ref|YP_312119.1| lipoprotein NlpI [Shigella sonnei Ss046]
 gi|89109928|ref|AP_003708.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|91212583|ref|YP_542569.1| lipoprotein NlpI [Escherichia coli UTI89]
 gi|110643404|ref|YP_671134.1| lipoprotein NlpI [Escherichia coli 536]
 gi|110807032|ref|YP_690552.1| lipoprotein NlpI [Shigella flexneri 5 str. 8401]
 gi|117625459|ref|YP_858782.1| lipoprotein NlpI [Escherichia coli APEC O1]
 gi|157159443|ref|YP_001464638.1| lipoprotein NlpI [Escherichia coli E24377A]
 gi|157162648|ref|YP_001459966.1| lipoprotein NlpI [Escherichia coli HS]
 gi|168749241|ref|ZP_02774263.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4113]
 gi|168754144|ref|ZP_02779151.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4401]
 gi|168762129|ref|ZP_02787136.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4501]
 gi|168769581|ref|ZP_02794588.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4486]
 gi|168773170|ref|ZP_02798177.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4196]
 gi|168781306|ref|ZP_02806313.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4076]
 gi|168786048|ref|ZP_02811055.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC869]
 gi|168797764|ref|ZP_02822771.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC508]
 gi|170018585|ref|YP_001723539.1| lipoprotein NlpI [Escherichia coli ATCC 8739]
 gi|170082700|ref|YP_001732020.1| hypothetical protein ECDH10B_3336 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682635|ref|YP_001745437.1| lipoprotein NlpI [Escherichia coli SMS-3-5]
 gi|188496274|ref|ZP_03003544.1| lipoprotein NlpI [Escherichia coli 53638]
 gi|191168029|ref|ZP_03029829.1| lipoprotein NlpI [Escherichia coli B7A]
 gi|191172220|ref|ZP_03033763.1| lipoprotein NlpI [Escherichia coli F11]
 gi|193062002|ref|ZP_03043098.1| lipoprotein NlpI [Escherichia coli E22]
 gi|193067395|ref|ZP_03048363.1| lipoprotein NlpI [Escherichia coli E110019]
 gi|194427663|ref|ZP_03060210.1| lipoprotein NlpI [Escherichia coli B171]
 gi|194433721|ref|ZP_03065996.1| lipoprotein NlpI [Shigella dysenteriae 1012]
 gi|194438818|ref|ZP_03070904.1| lipoprotein NlpI [Escherichia coli 101-1]
 gi|195938383|ref|ZP_03083765.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4024]
 gi|208806724|ref|ZP_03249061.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4206]
 gi|208813987|ref|ZP_03255316.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4045]
 gi|208819616|ref|ZP_03259936.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4042]
 gi|209399789|ref|YP_002272634.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4115]
 gi|209920640|ref|YP_002294724.1| lipoprotein NlpI [Escherichia coli SE11]
 gi|215488481|ref|YP_002330912.1| lipoprotein NlpI [Escherichia coli O127:H6 str. E2348/69]
 gi|217327038|ref|ZP_03443121.1| lipoprotein NlpI [Escherichia coli O157:H7 str. TW14588]
 gi|218550448|ref|YP_002384239.1| lipoprotein NlpI [Escherichia fergusonii ATCC 35469]
 gi|218555735|ref|YP_002388648.1| lipoprotein NlpI [Escherichia coli IAI1]
 gi|218560235|ref|YP_002393148.1| lipoprotein NlpI [Escherichia coli S88]
 gi|218691455|ref|YP_002399667.1| lipoprotein NlpI [Escherichia coli ED1a]
 gi|218701934|ref|YP_002409563.1| lipoprotein NlpI [Escherichia coli IAI39]
 gi|227887887|ref|ZP_04005692.1| lipoprotein NlpI [Escherichia coli 83972]
 gi|237706084|ref|ZP_04536565.1| lipoprotein NlpI [Escherichia sp. 3_2_53FAA]
 gi|238902267|ref|YP_002928063.1| hypothetical protein BWG_2867 [Escherichia coli BW2952]
 gi|253772001|ref|YP_003034832.1| lipoprotein NlpI [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254038329|ref|ZP_04872387.1| lipoprotein NlpI [Escherichia sp. 1_1_43]
 gi|254163107|ref|YP_003046215.1| lipoprotein NlpI [Escherichia coli B str. REL606]
 gi|254795114|ref|YP_003079951.1| lipoprotein NlpI [Escherichia coli O157:H7 str. TW14359]
 gi|256018917|ref|ZP_05432782.1| lipoprotein NlpI [Shigella sp. D9]
 gi|256024261|ref|ZP_05438126.1| lipoprotein NlpI [Escherichia sp. 4_1_40B]
 gi|260845978|ref|YP_003223756.1| hypothetical protein ECO103_3912 [Escherichia coli O103:H2 str.
           12009]
 gi|260857292|ref|YP_003231183.1| hypothetical protein ECO26_4269 [Escherichia coli O26:H11 str.
           11368]
 gi|260869915|ref|YP_003236317.1| hypothetical protein ECO111_3987 [Escherichia coli O111:H- str.
           11128]
 gi|261228175|ref|ZP_05942456.1| lipoprotein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255031|ref|ZP_05947564.1| hypothetical protein EscherichiacoliO157EcO_04293 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284539|ref|YP_003501357.1| Lipoprotein nlpI precursor [Escherichia coli O55:H7 str. CB9615]
 gi|293412538|ref|ZP_06655261.1| lipoprotein NlpI [Escherichia coli B354]
 gi|293416597|ref|ZP_06659236.1| lipoprotein nlpI [Escherichia coli B185]
 gi|293449500|ref|ZP_06663921.1| lipoprotein NlpI [Escherichia coli B088]
 gi|300817585|ref|ZP_07097801.1| lipoprotein NlpI [Escherichia coli MS 107-1]
 gi|300823874|ref|ZP_07103998.1| lipoprotein NlpI [Escherichia coli MS 119-7]
 gi|300918918|ref|ZP_07135477.1| lipoprotein NlpI [Escherichia coli MS 115-1]
 gi|300926098|ref|ZP_07141916.1| lipoprotein NlpI [Escherichia coli MS 182-1]
 gi|300929853|ref|ZP_07145299.1| lipoprotein NlpI [Escherichia coli MS 187-1]
 gi|300938073|ref|ZP_07152851.1| lipoprotein NlpI [Escherichia coli MS 21-1]
 gi|300948812|ref|ZP_07162880.1| lipoprotein NlpI [Escherichia coli MS 116-1]
 gi|300955749|ref|ZP_07168094.1| lipoprotein NlpI [Escherichia coli MS 175-1]
 gi|300977830|ref|ZP_07174070.1| lipoprotein NlpI [Escherichia coli MS 200-1]
 gi|300990762|ref|ZP_07179334.1| lipoprotein NlpI [Escherichia coli MS 45-1]
 gi|301022017|ref|ZP_07185960.1| lipoprotein NlpI [Escherichia coli MS 69-1]
 gi|301025992|ref|ZP_07189474.1| lipoprotein NlpI [Escherichia coli MS 196-1]
 gi|301047995|ref|ZP_07195037.1| lipoprotein NlpI [Escherichia coli MS 185-1]
 gi|301326414|ref|ZP_07219768.1| lipoprotein NlpI [Escherichia coli MS 78-1]
 gi|301644874|ref|ZP_07244846.1| lipoprotein NlpI [Escherichia coli MS 146-1]
 gi|307313130|ref|ZP_07592756.1| TPR repeat-containing protein [Escherichia coli W]
 gi|309793741|ref|ZP_07688167.1| lipoprotein NlpI [Escherichia coli MS 145-7]
 gi|312968498|ref|ZP_07782707.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
 gi|312972566|ref|ZP_07786739.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|331648964|ref|ZP_08350052.1| lipoprotein NlpI [Escherichia coli M605]
 gi|331654769|ref|ZP_08355769.1| lipoprotein NlpI [Escherichia coli M718]
 gi|331659452|ref|ZP_08360394.1| lipoprotein NlpI [Escherichia coli TA206]
 gi|331669992|ref|ZP_08370837.1| lipoprotein NlpI [Escherichia coli TA271]
 gi|331674701|ref|ZP_08375460.1| lipoprotein NlpI [Escherichia coli TA280]
 gi|331679244|ref|ZP_08379916.1| lipoprotein NlpI [Escherichia coli H591]
 gi|332280006|ref|ZP_08392419.1| lipoprotein NlpI [Shigella sp. D9]
 gi|84028682|sp|P0AFB3|NLPI_ECO57 RecName: Full=Lipoprotein nlpI; Flags: Precursor
 gi|84028683|sp|P0AFB2|NLPI_ECOL6 RecName: Full=Lipoprotein nlpI; Flags: Precursor
 gi|84028684|sp|P0AFB1|NLPI_ECOLI RecName: Full=Lipoprotein nlpI; Flags: Precursor
 gi|84028685|sp|P0AFB4|NLPI_SHIFL RecName: Full=Lipoprotein nlpI; Flags: Precursor
 gi|12517774|gb|AAG58299.1|AE005545_1 putative control proteins [Escherichia coli O157:H7 str. EDL933]
 gi|26110173|gb|AAN82359.1|AE016767_119 Lipoprotein nlpI precursor [Escherichia coli CFT073]
 gi|606103|gb|AAA57966.1| ORF_f294 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789554|gb|AAC76197.1| lipoprotein involved in osmotic sensitivity and filamentation
           [Escherichia coli str. K-12 substr. MG1655]
 gi|13363517|dbj|BAB37467.1| lipoprotein precursor [Escherichia coli O157:H7 str. Sakai]
 gi|30042762|gb|AAP18485.1| putative control proteins [Shigella flexneri 2a str. 2457T]
 gi|56383828|gb|AAN44671.2| putative control proteins [Shigella flexneri 2a str. 301]
 gi|73857177|gb|AAZ89884.1| putative control proteins [Shigella sonnei Ss046]
 gi|85675959|dbj|BAE77209.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|91074157|gb|ABE09038.1| lipoprotein NlpI precursor [Escherichia coli UTI89]
 gi|110344996|gb|ABG71233.1| lipoprotein NlpI precursor [Escherichia coli 536]
 gi|110616580|gb|ABF05247.1| putative control proteins [Shigella flexneri 5 str. 8401]
 gi|115514583|gb|ABJ02658.1| putative lipoprotein NlpI [Escherichia coli APEC O1]
 gi|157068328|gb|ABV07583.1| lipoprotein NlpI [Escherichia coli HS]
 gi|157081473|gb|ABV21181.1| lipoprotein NlpI [Escherichia coli E24377A]
 gi|169753513|gb|ACA76212.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli ATCC 8739]
 gi|169890535|gb|ACB04242.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|170520353|gb|ACB18531.1| lipoprotein NlpI [Escherichia coli SMS-3-5]
 gi|187770935|gb|EDU34779.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4196]
 gi|188016416|gb|EDU54538.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4113]
 gi|188491473|gb|EDU66576.1| lipoprotein NlpI [Escherichia coli 53638]
 gi|189001049|gb|EDU70035.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4076]
 gi|189358486|gb|EDU76905.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4401]
 gi|189361453|gb|EDU79872.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4486]
 gi|189367605|gb|EDU86021.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4501]
 gi|189373886|gb|EDU92302.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC869]
 gi|189379646|gb|EDU98062.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC508]
 gi|190901898|gb|EDV61647.1| lipoprotein NlpI [Escherichia coli B7A]
 gi|190907530|gb|EDV67126.1| lipoprotein NlpI [Escherichia coli F11]
 gi|192932222|gb|EDV84820.1| lipoprotein NlpI [Escherichia coli E22]
 gi|192959352|gb|EDV89787.1| lipoprotein NlpI [Escherichia coli E110019]
 gi|194414171|gb|EDX30446.1| lipoprotein NlpI [Escherichia coli B171]
 gi|194417984|gb|EDX34078.1| lipoprotein NlpI [Shigella dysenteriae 1012]
 gi|194422290|gb|EDX38291.1| lipoprotein NlpI [Escherichia coli 101-1]
 gi|208726525|gb|EDZ76126.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4206]
 gi|208735264|gb|EDZ83951.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4045]
 gi|208739739|gb|EDZ87421.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4042]
 gi|209161189|gb|ACI38622.1| lipoprotein NlpI [Escherichia coli O157:H7 str. EC4115]
 gi|209758388|gb|ACI77506.1| lipoprotein precursor [Escherichia coli]
 gi|209758390|gb|ACI77507.1| lipoprotein precursor [Escherichia coli]
 gi|209758392|gb|ACI77508.1| lipoprotein precursor [Escherichia coli]
 gi|209758394|gb|ACI77509.1| lipoprotein precursor [Escherichia coli]
 gi|209758396|gb|ACI77510.1| lipoprotein precursor [Escherichia coli]
 gi|209913899|dbj|BAG78973.1| lipoprotein [Escherichia coli SE11]
 gi|215266553|emb|CAS10992.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|217319405|gb|EEC27830.1| lipoprotein NlpI [Escherichia coli O157:H7 str. TW14588]
 gi|218357989|emb|CAQ90635.1| lipoprotein precursor [Escherichia fergusonii ATCC 35469]
 gi|218362503|emb|CAR00127.1| lipoprotein precursor [Escherichia coli IAI1]
 gi|218367004|emb|CAR04775.1| lipoprotein precursor [Escherichia coli S88]
 gi|218371920|emb|CAR19776.1| lipoprotein precursor [Escherichia coli IAI39]
 gi|218429019|emb|CAR09966.2| lipoprotein precursor [Escherichia coli ED1a]
 gi|222034882|emb|CAP77625.1| Lipoprotein nlpI [Escherichia coli LF82]
 gi|226839953|gb|EEH71974.1| lipoprotein NlpI [Escherichia sp. 1_1_43]
 gi|226899124|gb|EEH85383.1| lipoprotein NlpI [Escherichia sp. 3_2_53FAA]
 gi|227835283|gb|EEJ45749.1| lipoprotein NlpI [Escherichia coli 83972]
 gi|238860382|gb|ACR62380.1| conserved protein [Escherichia coli BW2952]
 gi|242378708|emb|CAQ33498.1| lipoprotein involved in cell division [Escherichia coli BL21(DE3)]
 gi|253323045|gb|ACT27647.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975008|gb|ACT40679.1| hypothetical protein ECB_03030 [Escherichia coli B str. REL606]
 gi|253979164|gb|ACT44834.1| hypothetical protein ECD_03030 [Escherichia coli BL21(DE3)]
 gi|254594514|gb|ACT73875.1| lipoprotein [Escherichia coli O157:H7 str. TW14359]
 gi|257755941|dbj|BAI27443.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257761125|dbj|BAI32622.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257766271|dbj|BAI37766.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260447808|gb|ACX38230.1| TPR repeat-containing protein [Escherichia coli DH1]
 gi|281180207|dbj|BAI56537.1| lipoprotein [Escherichia coli SE15]
 gi|281602547|gb|ADA75531.1| Lipoprotein nlpI precursor [Shigella flexneri 2002017]
 gi|290764412|gb|ADD58373.1| Lipoprotein nlpI precursor [Escherichia coli O55:H7 str. CB9615]
 gi|291322590|gb|EFE62019.1| lipoprotein NlpI [Escherichia coli B088]
 gi|291431953|gb|EFF04936.1| lipoprotein nlpI [Escherichia coli B185]
 gi|291469309|gb|EFF11800.1| lipoprotein NlpI [Escherichia coli B354]
 gi|294492744|gb|ADE91500.1| lipoprotein NlpI [Escherichia coli IHE3034]
 gi|299879887|gb|EFI88098.1| lipoprotein NlpI [Escherichia coli MS 196-1]
 gi|300300138|gb|EFJ56523.1| lipoprotein NlpI [Escherichia coli MS 185-1]
 gi|300308207|gb|EFJ62727.1| lipoprotein NlpI [Escherichia coli MS 200-1]
 gi|300317382|gb|EFJ67166.1| lipoprotein NlpI [Escherichia coli MS 175-1]
 gi|300397732|gb|EFJ81270.1| lipoprotein NlpI [Escherichia coli MS 69-1]
 gi|300407070|gb|EFJ90608.1| lipoprotein NlpI [Escherichia coli MS 45-1]
 gi|300413944|gb|EFJ97254.1| lipoprotein NlpI [Escherichia coli MS 115-1]
 gi|300417863|gb|EFK01174.1| lipoprotein NlpI [Escherichia coli MS 182-1]
 gi|300451701|gb|EFK15321.1| lipoprotein NlpI [Escherichia coli MS 116-1]
 gi|300456933|gb|EFK20426.1| lipoprotein NlpI [Escherichia coli MS 21-1]
 gi|300462215|gb|EFK25708.1| lipoprotein NlpI [Escherichia coli MS 187-1]
 gi|300523642|gb|EFK44711.1| lipoprotein NlpI [Escherichia coli MS 119-7]
 gi|300529883|gb|EFK50945.1| lipoprotein NlpI [Escherichia coli MS 107-1]
 gi|300846903|gb|EFK74663.1| lipoprotein NlpI [Escherichia coli MS 78-1]
 gi|301076819|gb|EFK91625.1| lipoprotein NlpI [Escherichia coli MS 146-1]
 gi|306907041|gb|EFN37549.1| TPR repeat-containing protein [Escherichia coli W]
 gi|307555259|gb|ADN48034.1| lipoprotein NlpI precursor [Escherichia coli ABU 83972]
 gi|307625236|gb|ADN69540.1| lipoprotein NlpI [Escherichia coli UM146]
 gi|308122698|gb|EFO59960.1| lipoprotein NlpI [Escherichia coli MS 145-7]
 gi|309703591|emb|CBJ02931.1| TPR repeat lipoprotein [Escherichia coli ETEC H10407]
 gi|310332508|gb|EFP99721.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|312286716|gb|EFR14627.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75]
 gi|312947722|gb|ADR28549.1| lipoprotein NlpI [Escherichia coli O83:H1 str. NRG 857C]
 gi|313648595|gb|EFS13037.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str.
           2457T]
 gi|315062471|gb|ADT76798.1| conserved protein [Escherichia coli W]
 gi|315137751|dbj|BAJ44910.1| lipoprotein nlpI precursor [Escherichia coli DH1]
 gi|315288935|gb|EFU48333.1| lipoprotein NlpI [Escherichia coli MS 110-3]
 gi|315294908|gb|EFU54247.1| lipoprotein NlpI [Escherichia coli MS 153-1]
 gi|315297885|gb|EFU57155.1| lipoprotein NlpI [Escherichia coli MS 16-3]
 gi|315617246|gb|EFU97855.1| tetratricopeptide repeat family protein [Escherichia coli 3431]
 gi|320175527|gb|EFW50623.1| Lipoprotein nlpI precursor [Shigella dysenteriae CDC 74-1112]
 gi|320181439|gb|EFW56357.1| Lipoprotein nlpI precursor [Shigella boydii ATCC 9905]
 gi|320189517|gb|EFW64176.1| Lipoprotein nlpI precursor [Escherichia coli O157:H7 str. EC1212]
 gi|320202077|gb|EFW76652.1| Lipoprotein nlpI precursor [Escherichia coli EC4100B]
 gi|320640235|gb|EFX09807.1| lipoprotein NlpI [Escherichia coli O157:H7 str. G5101]
 gi|320645532|gb|EFX14541.1| lipoprotein NlpI [Escherichia coli O157:H- str. 493-89]
 gi|320650842|gb|EFX19299.1| lipoprotein NlpI [Escherichia coli O157:H- str. H 2687]
 gi|320656223|gb|EFX24135.1| lipoprotein NlpI [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661913|gb|EFX29321.1| lipoprotein NlpI [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666748|gb|EFX33727.1| lipoprotein NlpI [Escherichia coli O157:H7 str. LSU-61]
 gi|323162857|gb|EFZ48692.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
 gi|323165121|gb|EFZ50911.1| tetratricopeptide repeat family protein [Shigella sonnei 53G]
 gi|323178876|gb|EFZ64452.1| tetratricopeptide repeat family protein [Escherichia coli 1180]
 gi|323189214|gb|EFZ74498.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1]
 gi|323376941|gb|ADX49209.1| Tetratricopeptide TPR_1 repeat-containing protein [Escherichia coli
           KO11]
 gi|323936141|gb|EGB32435.1| tetratricopeptide [Escherichia coli E1520]
 gi|323941735|gb|EGB37914.1| tetratricopeptide [Escherichia coli E482]
 gi|323946981|gb|EGB42997.1| tetratricopeptide [Escherichia coli H120]
 gi|323957688|gb|EGB53402.1| tetratricopeptide [Escherichia coli H263]
 gi|323961065|gb|EGB56680.1| tetratricopeptide [Escherichia coli H489]
 gi|323966345|gb|EGB61779.1| tetratricopeptide [Escherichia coli M863]
 gi|323970272|gb|EGB65543.1| tetratricopeptide [Escherichia coli TA007]
 gi|323979118|gb|EGB74196.1| tetratricopeptide [Escherichia coli TW10509]
 gi|324008762|gb|EGB77981.1| lipoprotein NlpI [Escherichia coli MS 57-2]
 gi|324012111|gb|EGB81330.1| lipoprotein NlpI [Escherichia coli MS 60-1]
 gi|324018313|gb|EGB87532.1| lipoprotein NlpI [Escherichia coli MS 117-3]
 gi|326337865|gb|EGD61699.1| Lipoprotein nlpI precursor [Escherichia coli O157:H7 str. 1125]
 gi|326347434|gb|EGD71159.1| Lipoprotein nlpI precursor [Escherichia coli O157:H7 str. 1044]
 gi|327251944|gb|EGE63630.1| tetratricopeptide repeat family protein [Escherichia coli STEC_7v]
 gi|330909221|gb|EGH37735.1| lipoprotein nlpI precursor [Escherichia coli AA86]
 gi|331042711|gb|EGI14853.1| lipoprotein NlpI [Escherichia coli M605]
 gi|331048151|gb|EGI20228.1| lipoprotein NlpI [Escherichia coli M718]
 gi|331054034|gb|EGI26063.1| lipoprotein NlpI [Escherichia coli TA206]
 gi|331062905|gb|EGI34819.1| lipoprotein NlpI [Escherichia coli TA271]
 gi|331068140|gb|EGI39536.1| lipoprotein NlpI [Escherichia coli TA280]
 gi|331073309|gb|EGI44632.1| lipoprotein NlpI [Escherichia coli H591]
 gi|332086105|gb|EGI91267.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82]
 gi|332086376|gb|EGI91523.1| tetratricopeptide repeat family protein [Shigella dysenteriae
           155-74]
 gi|332102358|gb|EGJ05704.1| lipoprotein NlpI [Shigella sp. D9]
 gi|332345120|gb|AEE58454.1| tetratricopeptide repeat protein [Escherichia coli UMNK88]
 gi|332752323|gb|EGJ82713.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70]
 gi|332754545|gb|EGJ84911.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71]
 gi|332765160|gb|EGJ95387.1| tetratricopeptide repeat family protein [Shigella flexneri 2930-71]
 gi|332999242|gb|EGK18828.1| tetratricopeptide repeat family protein [Shigella flexneri K-272]
 gi|333000340|gb|EGK19923.1| tetratricopeptide repeat family protein [Shigella flexneri K-218]
 gi|333014647|gb|EGK33994.1| tetratricopeptide repeat family protein [Shigella flexneri K-304]
 gi|333014964|gb|EGK34308.1| tetratricopeptide repeat family protein [Shigella flexneri K-227]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|288928992|ref|ZP_06422838.1| TPR domain protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329976|gb|EFC68561.1| TPR domain protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 558

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 23/161 (14%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A     Y  A E           R  A  +L   + + G+L  A+ Y  KAL  +PDA  
Sbjct: 373 AEKNNIYKKATELY-----DQDYR--AYNNLGVLAMQAGNLAEARTYFQKALATAPDAAE 425

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-------------EWNRNRAILLIARSLEN 236
               +    +     S A T + + ++                 ++     L    S   
Sbjct: 426 ANANLGMVALYEGNISEAETLIAKAQQANDINKAVGALNIAKGNYSLAETTLSSYESNMA 485

Query: 237 ADKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNK 275
           A    M  +Y  A+ +LK     +++      A +   Q  
Sbjct: 486 ALAKLMNKNYEGALATLKNVKHPDAVT-DYLMAVAYARQGD 525


>gi|242072866|ref|XP_002446369.1| hypothetical protein SORBIDRAFT_06g014910 [Sorghum bicolor]
 gi|241937552|gb|EES10697.1| hypothetical protein SORBIDRAFT_06g014910 [Sorghum bicolor]
          Length = 474

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 14/147 (9%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLE---VQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           LA  +H+    ++   + ++   L     + AL     + A    E M   P     +  
Sbjct: 114 LAISLHAVAVARNLLPSPHVANALVSLYARHAL----PDAARRVFEEMPSAPD--VVSYN 167

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
           +L       G +  A+    +   +     W    V+     A     A+   ++ ++  
Sbjct: 168 ALMHAYVNAGRVGVAREVFEEM-PVRDATSWG--TVIAGCAKAGRLEEAVLLFDRMREEG 224

Query: 219 --KEWNRNRAILLIARSLENADKGDMI 243
              +     A+L     L   DKG  +
Sbjct: 225 FRPDSVALVAVLSCCAQLGALDKGQEV 251


>gi|182439078|ref|YP_001826797.1| putative AfsR-like transcriptional regulator [Streptomyces griseus
            subsp. griseus NBRC 13350]
 gi|178467594|dbj|BAG22114.1| putative AfsR-like transcriptional regulator [Streptomyces griseus
            subsp. griseus NBRC 13350]
          Length = 1020

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 8/100 (8%)

Query: 164  SCRIGDLNSAQRYATKALDISP------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +   G    A+ +A +AL+++           V   V      A  +  A+       ++
Sbjct: 907  AHARGRTAEAEEFAVRALELARSGATPVRLTEVENLVGHLRSEAGAYESALELHRHAHRS 966

Query: 218  AKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            A    +    A  L   +      GD  ++     E+ +L
Sbjct: 967  AVNMGFRSEEASALTGLARALEALGDEESAREHRTEAARL 1006


>gi|149917580|ref|ZP_01906077.1| TPR-domain containing protein [Plesiocystis pacifica SIR-1]
 gi|149821643|gb|EDM81041.1| TPR-domain containing protein [Plesiocystis pacifica SIR-1]
          Length = 709

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 92/297 (30%), Gaps = 26/297 (8%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVY 158
           A +  S ++Q+          +L       +   + A   +E  L+     P  +  A  
Sbjct: 24  AGRFDSALTQRILSAPAAFPRMLRACFYAEKGMLDSARADIEAALEHGAENPIIQLVAGM 83

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE--WS-RAITFLNQKK 215
            L+       D + A    T    +SP A     A  Q   +A    W       L    
Sbjct: 84  LLF----TTRDYHRALERLTHTAALSPKAS--RRARHQALAIAGSLGWEHDVREQLLGAI 137

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +  E+   +A      +           +      +++L        +  A      ++
Sbjct: 138 ADEPEYAPWQAQACRFYARGR----YWQQALVHGKRAVELAPEVPSMWMEVASLHARLDQ 193

Query: 276 KRKAEVILEKIW---KVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVES 327
           + +A   LE+     + +   + A      +Y  + +       +   R+ E+  +S E 
Sbjct: 194 REEAVAALERALSLCERDDRRDEALYRREAVYVAINASAFDLAFENIERVLELEPDSPEL 253

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQ 383
            V +S++       + A A A  A+++ P       +L  +        D I    +
Sbjct: 254 HVQLSELHSWKDENEAAEAHARKALELRPDYPPALRMLGALAVREERYEDAIEQLLR 310


>gi|160896065|ref|YP_001561647.1| TPR repeat-containing protein [Delftia acidovorans SPH-1]
 gi|160361649|gb|ABX33262.1| Tetratricopeptide TPR_2 repeat protein [Delftia acidovorans SPH-1]
          Length = 974

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 53/169 (31%), Gaps = 9/169 (5%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           AL I P++  +   +            A T L +  +   +     A+L    +     +
Sbjct: 394 ALQIEPESLELLLHLAMLLCSGGRLGEAETCLRKALQLRPD----NAVLHCETAFALFAQ 449

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA-- 296
                +     E+L++  ++  A +   + L+      + +  L +  +  P   E+   
Sbjct: 450 KKWEQALELLEEALRIEPDNARAHMLRCQVLLETGDLPRLDRALNEALERLPGDRELMFQ 509

Query: 297 -NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
              Y      +    +++   L +++ +   +        +       A
Sbjct: 510 RAAYWD-RCGDAQRHMQQLDELVKLHPDYEPAYSARLFAMIHSPEASAA 557


>gi|145595429|ref|YP_001159726.1| fibronectin, type III domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145304766|gb|ABP55348.1| Fibronectin, type III domain protein [Salinispora tropica CNB-440]
          Length = 427

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 16/130 (12%)

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDIS------PDAPW---VTEAVVQQYVLAKE 203
           R  A+          GDL  A+R  T  ++        PD P        + + +  A +
Sbjct: 7   RALALRH-------TGDLAGARRLLTDTVESGHPPPYGPDHPEVLKAAHLLARLHREAGD 59

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
            S A   L +     +    +   LL+A   E A   D + + H+A  + +    +  A+
Sbjct: 60  PSAARRVLEEALAAGERLRSDADPLLLALVFELASVADELGNRHEARRNFRRIVTAGPAA 119

Query: 264 ICAAKSLISQ 273
           + A  S +  
Sbjct: 120 LGADHSSVRA 129


>gi|78046880|ref|YP_363055.1| putative two-component system sensor histidine kinase-response
           regulator hybridprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035310|emb|CAJ22955.1| putative two-component system sensor histidine kinase-response
           regulator hybridprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 651

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 20/204 (9%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 68  RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLLATLRTLLRARR 127

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +      +       A L +  +     +    A+   AI +  L   
Sbjct: 128 AEEALRVSEARFREIFEHISAPIAVVDANLHMHEANAAFQRLIGSATLGAAIHAAGLDQA 187

Query: 259 SIMASICAAKSLISQNKKRKAE-------VILEKIWKVNPH--PEIANIYTHLLSENTVG 309
              A++ A  + ++Q ++            + E  W+V+P+  P++  +   L+ + T  
Sbjct: 188 ---AAVHALTTALAQRERWSGTLSLLRDGKLCETEWRVSPYREPDLGLL---LVEDVTEQ 241

Query: 310 KLKRALRLEEINKESVESLVIVSK 333
           +L+   + +E++  + E    +++
Sbjct: 242 RLREREQRQELDTATSELAHQIAQ 265


>gi|15966541|ref|NP_386894.1| putative signal peptide protein [Sinorhizobium meliloti 1021]
 gi|307300422|ref|ZP_07580202.1| TPR repeat-containing protein [Sinorhizobium meliloti BL225C]
 gi|307318287|ref|ZP_07597722.1| TPR repeat-containing protein [Sinorhizobium meliloti AK83]
 gi|15075812|emb|CAC47367.1| Hypothetical signal peptide protein [Sinorhizobium meliloti 1021]
 gi|306895969|gb|EFN26720.1| TPR repeat-containing protein [Sinorhizobium meliloti AK83]
 gi|306904588|gb|EFN35172.1| TPR repeat-containing protein [Sinorhizobium meliloti BL225C]
          Length = 204

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 36/115 (31%), Gaps = 2/115 (1%)

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           A  A   +P      +A+        +  +A    ++ +   ++       LL+  + + 
Sbjct: 37  AEVAALTTPK--ERVDALFADLKKEGDEDKARQVADRIRLEWQDSGSATVNLLMQWASKA 94

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                  A+     +++ L  + +      A         RK+   +  +  + P
Sbjct: 95  IADEKQTAALDLLDQAIALAPDYVEGWNRRATLHYQMGNFRKSMSDINHVLALEP 149


>gi|91977991|ref|YP_570650.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
 gi|91684447|gb|ABE40749.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5]
          Length = 281

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           A         D       A E  +       A++   ++L +  ++ +A  +LEK    N
Sbjct: 55  ALGARAEAPADPNRVAEIAGERYRANPKDAGAALAYGQALRAIGQRAQAVAMLEKASLAN 114

Query: 291 P-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSK-IALEM-GSIDQAHA 346
           P +  +   Y   L++N   K      L   +  ++ +  ++  +  AL+  G  D+A  
Sbjct: 115 PSNKTVLAAYGRALADNGNFKAA-FDTLTHAHSPDNPDWRILSVQGTALDQLGRSDEARR 173

Query: 347 KAMLAMKIAP 356
               A+K+AP
Sbjct: 174 YYASALKLAP 183



 Score = 36.5 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 48/165 (29%), Gaps = 7/165 (4%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDI 183
           L  +         +A    E     P     A+   Y ++ R  G    A     KA   
Sbjct: 56  LGARAEAPADPNRVAEIAGERYRANPKDAGAAL--AYGQALRAIGQRAQAVAMLEKASLA 113

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P    V  A  +       +  A   L     ++ +    R + +   +L+    G   
Sbjct: 114 NPSNKTVLAAYGRALADNGNFKAAFDTLTHA--HSPDNPDWRILSVQGTALDQL--GRSD 169

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            +      +LKL             S +   +  KAE  L + + 
Sbjct: 170 EARRYYASALKLAPGEPSVLSNLGLSYMLTKELPKAEETLRQAYA 214


>gi|297852694|ref|XP_002894228.1| hypothetical protein ARALYDRAFT_474140 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297340070|gb|EFH70487.1| hypothetical protein ARALYDRAFT_474140 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 2482

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 75/271 (27%), Gaps = 42/271 (15%)

Query: 100  IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              LA K   +    H    E             E   +        M   P     A+  
Sbjct: 1312 GALAEKCRVFAKALHYKEME------------FEGPRS------RRMDANPVAVVEALIH 1353

Query: 160  LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            +  +  +         YA + LD+     W        Y   + W  A+       K ++
Sbjct: 1354 INNQLHQHEAAVGILTYAQQHLDVQLKESW--------YEKLQRWDDALKAYT--LKASQ 1403

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              N +  +      +         A+     E   LC      +  +A+  +       A
Sbjct: 1404 TSNPHLVLEATLGQMRCL------AALARWEELNNLCKEYWSPAEPSARLEM-------A 1450

Query: 280  EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +  +  W +    ++A  Y   L +    KL+           S       + + +  G
Sbjct: 1451 PMAAQAAWNMGEWDQMAE-YVSRLDDGDETKLRGLASPVSSGDGSSNGTFFRAVLLVRRG 1509

Query: 340  SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
              D+A      A K    +   L+L   E+A
Sbjct: 1510 KYDEAREYVERARKCLATELAALVLESYERA 1540


>gi|294139876|ref|YP_003555854.1| TPR domain-containing protein [Shewanella violacea DSS12]
 gi|293326345|dbj|BAJ01076.1| TPR domain protein [Shewanella violacea DSS12]
          Length = 252

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 76/226 (33%), Gaps = 28/226 (12%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  ++A+   +   A E  + +L         +Y L       G+   A     KA  I+
Sbjct: 35  LLAEVAMTNGRPGSAIEIYQALLGQAPQDVELLYLLGSAYNLSGEYEVALHQLNKASRIN 94

Query: 185 PDAPWVTEAVVQQ-----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
            +A + +   +Q+      + + +  +A+  L              A+   +  +  A  
Sbjct: 95  REAGYASRGEIQREIGRAQLASGDTPQALISLELASSLLP----GDAVTHNSLGVCYALH 150

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA--N 297
            D   +      +L +  +S              N        L   W ++  P++    
Sbjct: 151 QDYQEARGAFQAALNIDPSS---------LEYRNN--------LALAWILDDKPQLGIDV 193

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
           IY   L   +  K+++ L L    K  +E+   +++  L    +++
Sbjct: 194 IYPTYLRGKSTAKVRQNLALAFAMKGDLEAAKAIARQDLTKAELER 239


>gi|322418328|ref|YP_004197551.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124715|gb|ADW12275.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 568

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
            +Q+      ++  +L+ +    E  +  A +    M++      +    L     R GD
Sbjct: 431 AAQRELVGYSFVTEMLQAEALEQEGDWEGACKLCRAMVRREPDNPWGWLQLAGLQERGGD 490

Query: 170 LNSAQRYATKALDISPDA 187
           L  A R   K   + P  
Sbjct: 491 LAGAARSYQKLARLVPRH 508


>gi|302879516|ref|YP_003848080.1| tetratricopeptide TPR_2 repeat protein [Gallionella
           capsiferriformans ES-2]
 gi|302582305|gb|ADL56316.1| tetratricopeptide TPR_2 repeat protein [Gallionella
           capsiferriformans ES-2]
          Length = 338

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 51/150 (34%), Gaps = 15/150 (10%)

Query: 69  PAMLFHMLHKRNYDKGYKA------LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122
           P    H   K+   +G  A      L  G ++++  N+  A + +  V  Q     + L+
Sbjct: 125 PERKKHKPAKKGAKRGIIASTAIDPLKAGYLALSEGNLDRAEQYYLSVLAQRPQEKDALL 184

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATK 179
            L    IA      + A E    +L+       A     SL   +    D  +A+    +
Sbjct: 185 GL--AVIAQRRNHPDRATEYYRQVLREDLGNAAAAAGLASLTMHA----DPVTAESQLHE 238

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
            +D+ P AP    A+         W  A  
Sbjct: 239 LIDLKPTAPEFHYALGGVLARQLRWGEAQQ 268


>gi|251772295|gb|EES52865.1| Tetratricopeptide TPR_2 repeat protein [Leptospirillum
           ferrodiazotrophum]
          Length = 230

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +L A + +    GD   +     E+L    + ++     A +L    KKRKAE +L++  
Sbjct: 34  VLSAEAHQALLSGDAAKAVRLDQEALARSPDDVVLMNNLAVALGRIGKKRKAEALLQQAL 93

Query: 288 KVNP-HPEIANIYTHLL-----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
             +P +P I      +        +  G   R +  +           ++ K+ ++ G  
Sbjct: 94  VKSPENPRILLNLARIELALGKIGSAYGYASRIVSRDHW-PGGF--RTLMGKLDIDRGDY 150

Query: 342 DQAHAKAMLAMKIAP 356
            +AH     A +  P
Sbjct: 151 QEAHIYLHEAQERHP 165


>gi|255078610|ref|XP_002502885.1| hypothetical protein MICPUN_59356 [Micromonas sp. RCC299]
 gi|226518151|gb|ACO64143.1| hypothetical protein MICPUN_59356 [Micromonas sp. RCC299]
          Length = 708

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 73/227 (32%), Gaps = 54/227 (23%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA-------ILLIARSLENADKGDMIASYHDAIES 252
              EW+ A+       K   +  R RA           AR  E A + +       + E+
Sbjct: 194 AEHEWAAALEQAKAGAKREADEARKRASRLETDLAAAAARCEELAAELEASREREASAEA 253

Query: 253 LKLCDN------SIMASICAAKSLISQNKKRKAE--------------VILEKIWKVNPH 292
            +   +       I  ++  A+   ++++++ AE               +L+++W+    
Sbjct: 254 ARHQRDQNKTAGVIALAVKVARFERTRSRRKLAEDGLRLGTVSVQRSGTVLQEVWED--- 310

Query: 293 PEIANIYTHLLS------------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                 +  L S            ++   ++K  L L     +  E   + ++  L    
Sbjct: 311 ---GGAFRDLNSRAAAVQTAKDAADDERKRVKGRLPLPGAAIDESEERALRAEFVLS--- 364

Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
            ++AH   + A+K        L+  + E      +  I    + A  
Sbjct: 365 -EEAHKVRVAALKREED----LIGREREALEREKSAHIRE-LKRARD 405


>gi|218696870|ref|YP_002404537.1| lipoprotein NlpI [Escherichia coli 55989]
 gi|218353602|emb|CAU99789.1| lipoprotein precursor [Escherichia coli 55989]
 gi|324119530|gb|EGC13412.1| tetratricopeptide [Escherichia coli E1167]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|145298757|ref|YP_001141598.1| tetratricopeptide repeat protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851529|gb|ABO89850.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 388

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 95/305 (31%), Gaps = 63/305 (20%)

Query: 98  HNIPLARKMHSY-VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
             +  A K+H   V++Q T     L      +  LA    + A      + +        
Sbjct: 83  GEVDRAIKIHQNLVTRQLTREQRQLALQELARDFLAAGLLDRAEALWNELCEDSD----- 137

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                              Y   AL            ++  +   ++W +AI    + +K
Sbjct: 138 -------------------YEETALAQ----------LLIIHQQLRDWDKAIDVAVRLQK 168

Query: 217 -NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
              K+     +     ++      GD          +L +      AS+  A+  +    
Sbjct: 169 YQGKKLADPISHFYCEQAESALRDGDESMGRAKLKRALGVNPACARASLRLAELAMVAQD 228

Query: 276 KRKAEVILEKIW--------KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327
             +A   L +++        +  PH  +   Y          +  R+L L  + +++VE 
Sbjct: 229 YEQAGKDLLRVFEQDMDFASEAIPH--LTECY---------QRQGRSLELIPLLEQAVED 277

Query: 328 L------VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA--QIEQANSHNTDKIL 379
                  + ++K+  E   ++QA A  +  ++  P  + F  L   Q+  A      + L
Sbjct: 278 HAGVSVTLALAKLVEERDGLNQARALVLRQLRRHPSMKGFYQLVGFQLASAEEGPAKESL 337

Query: 380 YWTQS 384
              Q 
Sbjct: 338 ELLQQ 342


>gi|94970962|ref|YP_593010.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94553012|gb|ABF42936.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 746

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 13/194 (6%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           R MH+  +      +   V + +  I  A  +Y+ A   ++  ++     E A Y L+  
Sbjct: 521 RAMHASETAVVLRPDLPEVQVGQAWILYANNKYDEATAVIQRAIERKRDCEGAYYILFRT 580

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT--------FLNQKK 215
               G        A  A++ S D   +   ++       + + A+          L +  
Sbjct: 581 LFSAGRYQEVANLAEAAVEASGDDYNIYVPIMNSLGALGK-TEALRNFRQRDISALERHL 639

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K   E  R R +L    + E    G M  +  +   ++ L  N       AA    + NK
Sbjct: 640 KQVPEDARARILLATDYATE----GRMEEAARETSLAMTLRPNEATVLYNAACVFCTMNK 695

Query: 276 KRKAEVILEKIWKV 289
           K +A   L K W  
Sbjct: 696 KSEAMDALAKAWHA 709


>gi|84500253|ref|ZP_00998519.1| TPR domain protein [Oceanicola batsensis HTCC2597]
 gi|84392187|gb|EAQ04455.1| TPR domain protein [Oceanicola batsensis HTCC2597]
          Length = 554

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 11/208 (5%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  ++     +  +A      + +       A         + G  ++A     +  + 
Sbjct: 280 LLSAELLEDMGRPALATRAYRQVPRENPAFHAAELGRAAALRKSGRTDAALEVLEQLSES 339

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             D P V             +  A+   +      +  +R++  +L AR + +       
Sbjct: 340 HGDMPIVHTTRGDLLRGMSRYLDAVQAYDTALSLYEADDRSQWFVLYARGISHERLNHWP 399

Query: 244 ASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------- 295
            +  D   +LKL      + +      +  Q K  +A  ++E+  K    P+        
Sbjct: 400 EAESDFRAALKLNPEHPRVLNYLGYSLVEKQQKLAEALSMIERAAKAR--PDSGYILDSL 457

Query: 296 -ANIYTHLLSENTVGKLKRALRLEEINK 322
              +Y     ++ VG ++RA  L  ++ 
Sbjct: 458 GWALYRLGRYDDAVGHMERAAELMPVDP 485


>gi|325111315|ref|YP_004272383.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324971583|gb|ADY62361.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 448

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 90/319 (28%), Gaps = 86/319 (26%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL++I       A    +   +    + + +         L +  Y+ A E     + +
Sbjct: 166 RGLIAIGLKEYGQAINDFNLAIRYDKEYIDAMNN--RGYAYLEQGNYSKAIENFTDAIAL 223

Query: 150 PAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD--------------------- 186
             T  + +      F   ++GD  +A +  +KA+++SP+                     
Sbjct: 224 DETYVKSYNNRG--FTHMKVGDNEAAVKDFSKAIELSPNVVKHYLHRRDAWLAMGNQEKA 281

Query: 187 ------APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
                 A W  + ++               ++++ +         A LL+ R+       
Sbjct: 282 VADQKQAQWTQQLLL---------------ISRRMQREP----KNAELLVERAKHFVAAE 322

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
               ++ D  ++ K+  +      C A+    + + + A     K               
Sbjct: 323 RFEEAFEDLSQAEKMDQDLAAVHTCRAEIYYGREEYKAAIESCTKA-------------- 368

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
                              ++ +   S + +     +  G +D+A A    A +      
Sbjct: 369 -------------------LDADHDFSALSLRGDAYMATGKLDEAIADYNAAQRFDGTVA 409

Query: 360 IFLLLAQIEQANSHNTDKI 378
           +       E+    +    
Sbjct: 410 MAYWKRAEERKEGGDKSGA 428


>gi|297538108|ref|YP_003673877.1| type IV pilus biogenesis/stability protein PilW [Methylotenera sp.
           301]
 gi|297257455|gb|ADI29300.1| type IV pilus biogenesis/stability protein PilW [Methylotenera sp.
           301]
          Length = 253

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 2/159 (1%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
            IA E+    ++I  +   A   L   +  +G  + A     K++ + P           
Sbjct: 56  EIALEEFNTAVKIDPSFASAYNGLGLVNAELGKDDVADANFRKSIQLEPLNSEAHNNYGS 115

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                     +IT      KN        A+     ++ +  K +M  +     ++L++ 
Sbjct: 116 FLCARNRVDESITEFLAALKNPLYAT--PAMAYTNAAICSIRKKNMAGAESYLQQALQIE 173

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             S +A+   A     +N    A   L+      P PE+
Sbjct: 174 PLSQVAAYQLASLQFKRNDAMAARKTLQNAMLSRPGPEV 212


>gi|297568699|ref|YP_003690043.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924614|gb|ADH85424.1| Tetratricopeptide TPR_4 [Desulfurivibrio alkaliphilus AHT2]
          Length = 222

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           ++  A ++  A + +  +    +  +    +V L   Q+     Q   A      + + P
Sbjct: 114 LARDAGDLEGAAQAYQELLGTISRRDARRPMVQLSLAQVLSELGQDEQALRYYRELAETP 173

Query: 151 ATREFAVYSLYFESCRIGDLNSAQR 175
               + +        R GD  +A+ 
Sbjct: 174 GFEAWGLLGTGDVMARRGDTEAARE 198


>gi|159040180|ref|YP_001539433.1| TPR repeat-containing protein [Salinispora arenicola CNS-205]
 gi|157919015|gb|ABW00443.1| Tetratricopeptide TPR_2 repeat protein [Salinispora arenicola
           CNS-205]
          Length = 341

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 7/164 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           Q       +  A T L              A +L   S  +   G    +   A  +L  
Sbjct: 20  QLLAELGRYDEAATELGYAVALDPT----NATVLTTLSRVHLAAGRPADARTAADGALAA 75

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLK 312
             + + A +  A +L    +  +A    ++I  + P    A          S N    L 
Sbjct: 76  APDWVPALVARAMALADLTEHGEAARTADRILALGPDDAYAQRSGAAILAGSRNGQPALN 135

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            A R  E+  +   + +++  +A  +   D A      A+++ P
Sbjct: 136 AAWRGVELAPQDPAAHLVLGLVAANLQLYDLAERAYTEALRLDP 179


>gi|91782503|ref|YP_557709.1| TPR repeat-containing protein [Burkholderia xenovorans LB400]
 gi|91686457|gb|ABE29657.1| TPR repeatprotein [Burkholderia xenovorans LB400]
          Length = 607

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 77/236 (32%), Gaps = 20/236 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                 A   ++ A      +L        A++ L   S R+     ++ Y  +AL+I+P
Sbjct: 24  HADACFAAGHHHEAIAAYGRVLAEQPHNVHALHRLGLASFRVDRPERSREYLDRALNIAP 83

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD---- 241
               + E               I  L  +   A+ +      L    +  + + GD    
Sbjct: 84  GRADIWEH-----------RGLIAALGGELIAAEAFYHRAMSLGGGTASLHRNLGDCLKL 132

Query: 242 ---MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
              +  +    +E+L+       A    A+     +++  A     + W ++    + + 
Sbjct: 133 STRLAEACGHYLEALEREPALHHAVRALARISTELDRREDAADYWLRAWALDST-HLPDA 191

Query: 299 YTHLLSENTVGKLKRALR-LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
              +++ +   +  +    L  +          + ++A  +  +++      +A++
Sbjct: 192 LELIVALSAAQRDAQLDDLLAALRSRFAADAFALQQVAYALNGVERFRDAVSVAVE 247


>gi|27380734|ref|NP_772263.1| TPR domain-containing protein [Bradyrhizobium japonicum USDA 110]
 gi|27353899|dbj|BAC50888.1| TPR domain protein [Bradyrhizobium japonicum USDA 110]
          Length = 708

 Score = 37.6 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 47/153 (30%), Gaps = 30/153 (19%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---R 225
           DL  A     KAL I  +               + +  AI  LN+       +      R
Sbjct: 139 DLQEALACFDKALAIDGNLAEAHNGRGWVLCRLRNYDEAIASLNRALAIKPAYASALANR 198

Query: 226 AILL---------------------------IARSLENADKGDMIASYHDAIESLKLCDN 258
           A+ L                           + R+        M  + HD+ +++ +  +
Sbjct: 199 ALALQELLRIDEAMADCNQAIAVEPNDMNGWLGRASVWLQVQHMAEALHDSEKAIAVDPD 258

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ A +     L +  +  +A    ++  ++ P
Sbjct: 259 AVQAHLVRGICLAALGRVDEALASYDRALEIEP 291


>gi|297624941|ref|YP_003706375.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix
           DSM 17093]
 gi|297166121|gb|ADI15832.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
           17093]
          Length = 558

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 49/161 (30%), Gaps = 7/161 (4%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-IMAS 263
             A+    + +       +    L +A + E   + +      +A  S        + AS
Sbjct: 358 EGALMLQLRAQGEGARAAQGEVYLALAAAYEQLGRPNEARRSAEAAASRLADAALRLEAS 417

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKRALRLEEI 320
               +SL +  + R A + L ++    P    A ++  L           + R  R   +
Sbjct: 418 AILGRSLYALGEFRGALLALREVADARPEDANAQLWAGLAHYQRGEFEAAIARYERAVAL 477

Query: 321 NKESVESLVIVSKIALEMGSIDQAH---AKAMLAMKIAPRK 358
           +    E+ + +    L  G  + A           +  P  
Sbjct: 478 DPNGAEARLNLGAAYLAAGRYEDAALVYELLTTQFREDPDA 518


>gi|297564736|ref|YP_003683708.1| TPR repeat-containing protein [Meiothermus silvanus DSM 9946]
 gi|296849185|gb|ADH62200.1| TPR repeat-containing protein [Meiothermus silvanus DSM 9946]
          Length = 1298

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 58/204 (28%), Gaps = 27/204 (13%)

Query: 93   MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI-------ALAERQYNIAHEKLEM 145
            +++     P A  +            +    L            A     Y +A ++ + 
Sbjct: 1027 IALRKGEYPQAEVLGQRALA---LAQQAGDKLASANAGSRLGILAFYRGDYPLAVQRFQE 1083

Query: 146  MLQI-----PATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDA--PWV---TEAV 194
             L++        R    + SL   +    D  +A RY  +AL I+               
Sbjct: 1084 GLRLSQEAGDPYRIAGNLNSLGLVAIYQEDYAAATRYFEEALAIARALGNREAVGKFLTN 1143

Query: 195  VQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +        ++  AI    +     +E     A LL        + GD+  +  D   + 
Sbjct: 1144 LGLVAERQGDYPLAIRRYEESLAILREIGARHAALL-----NVLNLGDVATAQGDDEAAG 1198

Query: 254  KLCDNSIMASICAAKSLISQNKKR 277
            +     +  ++      ++    R
Sbjct: 1199 RYYLEVLPEALALGALHVALGTVR 1222


>gi|282901136|ref|ZP_06309067.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193968|gb|EFA68934.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 274

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 7/171 (4%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
           +Q+    +E      +   A  +  +  A +    +++   T   A  +          L
Sbjct: 38  AQELELGDELAT---QAFAATDKGDFATAEKYWTEIIERFPTNAGAWSNRGNSRVSQNKL 94

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A     +A+ ++P+                +W  AI        +  E +   A+   
Sbjct: 95  EAALTDYNQAIKLAPNVTDPYLNRGTALEGLGKWQEAI----ADYNHVLELDPQDAMAYN 150

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R    A  G    +  D  ++ ++  N   A    A ++    KK +AE 
Sbjct: 151 NRGNAQAGLGKWQEAIADYQKATQIAPNFAFARANYALAMYEIGKKEQAEK 201


>gi|206561325|ref|YP_002232090.1| hypothetical protein BCAL2981 [Burkholderia cenocepacia J2315]
 gi|198037367|emb|CAR53301.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 635

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L  A+     AL  +P                 + + A   + +      +   
Sbjct: 35  AHRAGRLAEAEHGYRNALASNPADADALHLFGVLRHQQGQHAEAADLVGRAVALRPD--- 91

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +         G +  +      +L L     +A      +  +  +   A    
Sbjct: 92  -DAALQLNLGNALKALGRLDEAIDRFRNALTLAPEFPLAHYNLGNAYAALQRHDDAIDAF 150

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++ P     H  + N    L   +    L    R  E+      +   ++     M
Sbjct: 151 RRALRLTPDDASIHNNLGNALNALGRHD--DALAAFGRALELRPGHAGAHNNLAMALNAM 208

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D A A    A+   PR
Sbjct: 209 GRADDAIAHFQAAIAAQPR 227


>gi|171915059|ref|ZP_02930529.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
          Length = 1382

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 32/205 (15%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH----EKLEMMLQIPATRE 154
              LA ++  Y+ +  T     L+  +  Q  +A+ QY  A     +     L   +   
Sbjct: 266 EGSLASRIPRYMKELTTSPEVDLI--VRAQALIAQGQYAEAEKVALQARGAALGDTSKDL 323

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
             +     E+ R     +A+  A ++ +  S       +   +               + 
Sbjct: 324 TKL----VEALRT-AGRAARELAGESHEKDSAAHYERAKTYFE-------------TAHS 365

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIMAS---ICAAK 268
                K +++   ++    +L +A +    A+   A+ ++    +  S  AS   +  A+
Sbjct: 366 LTSAGKNFDQW-VLVNCGIALIHAMRNQPAAALE-ALNAISASPSNRSTNASYSLVEVAQ 423

Query: 269 SLISQNKKRKAEVILEKIWKVNPHP 293
            L      R+A  +LEK  ++ P P
Sbjct: 424 MLGRHGNGRQAAQVLEKARQLLPVP 448


>gi|171058436|ref|YP_001790785.1| TPR repeat-containing protein [Leptothrix cholodnii SP-6]
 gi|170775881|gb|ACB34020.1| Tetratricopeptide TPR_2 repeat protein [Leptothrix cholodnii SP-6]
          Length = 1014

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 35/126 (27%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
            A      A      V    +       + L   +A  +     A    E +  +     
Sbjct: 279 AACQRGHTAAARAGCVQLLISQPQRPDAWRLLGLLAQHDGDLAQARALFERVTDVTPAYP 338

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
               SL     + G+ ++A     + + ++P        + Q Y  A    +AI      
Sbjct: 339 DGWRSLALLCLQQGERDAASHALARYMTLAPHDSATRHQLAQLYRQAGLREQAIALYRAG 398

Query: 215 KKNAKE 220
            ++   
Sbjct: 399 LQHQPA 404


>gi|126738569|ref|ZP_01754274.1| hypothetical protein RSK20926_08892 [Roseobacter sp. SK209-2-6]
 gi|126720368|gb|EBA17074.1| hypothetical protein RSK20926_08892 [Roseobacter sp. SK209-2-6]
          Length = 827

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 79/289 (27%), Gaps = 38/289 (13%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI-AHEKLEMMLQIPA 151
           M   A N  +A  +   V++         + L E  IA         A +  + + +   
Sbjct: 479 MFAEAGNHHVAEAILRAVTRTGAEPVPE-INLAEAAIAELVGDTETVAEKLTDEVAERTE 537

Query: 152 TREFAVYSLYFESCRIG--------DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +   A+  L   S R          +L ++    ++  ++           +    L   
Sbjct: 538 SAPDALIELIKLSYRERKALSPDVPELAASYELESRDTELGARLRDAEVVSL---ALMGR 594

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           + +A   L +   +     R R +  +   L           Y      L   + +   +
Sbjct: 595 FEQAFFELEEVTDHDGPAARARTMSPLMTLLTERADDVTFLKYGLVFAQLATVNEATPVA 654

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINK 322
              A+ L+      +AE IL+K                L   NT  +L  A   L     
Sbjct: 655 DLMARRLLDLGFAEQAESILKK--------------LALEPGNTERRLMTAEIALALDKP 700

Query: 323 ESVESLV----------IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
            +    +          + ++     G   +A    +           F
Sbjct: 701 SNALVELMGLEGSKANKLRAEALWRNGEYSRASEYMLAEQDRNAAARGF 749


>gi|332090679|gb|EGI95773.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74]
          Length = 290

 Score = 37.6 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 50  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 107

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 108 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 155


>gi|317493631|ref|ZP_07952052.1| tetratricopeptide [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918574|gb|EFV39912.1| tetratricopeptide [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 294

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  A    +   +    +N  R    + R +     G    +  D +++    D +    
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAR----LNRGIALYYGGRYSLAQDD-LQAFYQDDPNDPFR 166

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVN 290
                 +  +   +KA   LE+ +   
Sbjct: 167 SLWLYLVEREIDPKKATASLEQRYNKA 193


>gi|302523733|ref|ZP_07276075.1| serine/threonine protein kinase [Streptomyces sp. AA4]
 gi|302432628|gb|EFL04444.1| serine/threonine protein kinase [Streptomyces sp. AA4]
          Length = 820

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 29/113 (25%), Gaps = 2/113 (1%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            GL+ +A     +A      V        E    L     A     Y  A    E++ + 
Sbjct: 603 RGLIELAGGRPRVAHVAFDAV--YDDLPGEIAPKLALAVSAEGVGDYFGAARFYELVWRT 660

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
             T   A + L       G   SA          S        A ++    A 
Sbjct: 661 DRTYVSAAFGLARVYLAQGARQSAVEVLEGVPATSTHYVDAQVAAIKIKTRAH 713


>gi|302770745|ref|XP_002968791.1| hypothetical protein SELMODRAFT_90481 [Selaginella moellendorffii]
 gi|300163296|gb|EFJ29907.1| hypothetical protein SELMODRAFT_90481 [Selaginella moellendorffii]
          Length = 424

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 62/208 (29%), Gaps = 42/208 (20%)

Query: 127 VQIALAERQYNIAHEKL-EMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALD 182
            +    + ++  A E+  E +   P            L     ++G    A    + AL 
Sbjct: 197 AEDLFEKGKFRKAVEQYNEALSLDPEHEAQNFVLYLGLCKTLVKLGRGKEALPACSSALK 256

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           I  +         +  +L ++W  A++       +  +    R        L  A+KG  
Sbjct: 257 IDGEHAEALLQSGEAKILVEDWEGAMSDFKTSF-HKSQSQSAR------EGLHRAEKGLK 309

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--------- 293
           ++   +  E            I   ++  S +  ++A   L   W    HP         
Sbjct: 310 LSKRRNWYE------------ILGVETTASASDIKRAYKKLALQW----HPDKNVDNKEE 353

Query: 294 ------EIANIYTHLLSENTVGKLKRAL 315
                 +IA  Y  L  E+   +  R  
Sbjct: 354 AERKFQDIAAAYEVLGDEDKRTRYDRGE 381


>gi|298249263|ref|ZP_06973067.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Ktedonobacter racemifer DSM 44963]
 gi|297547267|gb|EFH81134.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Ktedonobacter racemifer DSM 44963]
          Length = 889

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 95/289 (32%), Gaps = 38/289 (13%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN---EYLVYLLEVQIALAERQYNIA 139
           +G   +    ++    N P  R++     +     +     L+ L    IA   +    A
Sbjct: 462 RGETLVVRAFIATQQQNFPRVRELARRALEYLPTSDVLMRSLISLCLG-IAFRFQNGLAA 520

Query: 140 HEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---A 193
            + LE  ++    P     ++  L ++    G L+ A     +AL + P+         A
Sbjct: 521 RKALEQAIRDAESPHVSLLSLEHLGYQLQEQGQLHQALEIYQQALRLQPEGKMTASMWMA 580

Query: 194 VVQQYVLAKEWSR---AITFLNQKKKNAKEWNRNRAIL----LIARSLENADKGDMIASY 246
            +    +  EW+    A   L Q  K  KE +   A L    L+A   +  ++ D   + 
Sbjct: 581 YLGIANVHLEWNELEHAEQALLQALKLGKERDVPAAFLEITVLLALIKQAQEQIDESLAL 640

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
               E +        A I   ++  +  + R+             H + A  +     + 
Sbjct: 641 LRREEMVGHQKQFAPA-IQVTRAYQALLEVRRG------------HVQAAIPWMRDFEQQ 687

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           TV           +   +     I++++ L  G+  +A       + +A
Sbjct: 688 TVS--------YPLTSRNEREYHILARVQLAAGNDAEAERVLAQMLTLA 728


>gi|253997793|ref|YP_003049856.1| hypothetical protein Msip34_0080 [Methylovorus sp. SIP3-4]
 gi|253984472|gb|ACT49329.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 381

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 1/106 (0%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L+    A        A ++  M+LQ  +    A+  +   + + G    A+ + +K L+
Sbjct: 197 NLIAAYKAWQAGDIASAQKQYRMVLQSDSGNVDALLGMAAIALQQGRQADARGWYSKVLE 256

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           + P  P    A++       +   + + L        E     A+L
Sbjct: 257 LDPRNPTAQSALIGI-GEEADPLGSESALKNLLAQQPEAAHLHAML 301


>gi|262194506|ref|YP_003265715.1| hypothetical protein Hoch_1262 [Haliangium ochraceum DSM 14365]
 gi|262077853|gb|ACY13822.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365]
          Length = 1429

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 98/273 (35%), Gaps = 52/273 (19%)

Query: 134  RQYNIAHEKLEMMLQ------IPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISP 185
             +Y  A  +LE  ++       P +   A  +  L       G+  SA+    ++L +  
Sbjct: 916  GRYVEARARLEQAVELDEHSETPDSASLASSLLGLARVLHAQGEFESARVQLERSLVLHT 975

Query: 186  D------APWVTEAVVQQ---YVLAKEWSRAITFLNQKK-----KNAKEWNRNRAILLIA 231
            +       P VT+ + +         +   A   L +       +   + +     +L A
Sbjct: 976  NTHGTVDHPHVTDTLYELAQILRSQGDLDGARDRLERALRKYIARYGTDEHVRVVGVLHA 1035

Query: 232  RSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAE-------VI 282
             +     +GD+  S+     SL L  +   + +    A++L    + R A+         
Sbjct: 1036 LAGVRLRQGDLDGSHSLLERSLALTRSLHGSDVHPLIARALHELGRVRFAQGRLVRGREC 1095

Query: 283  LEKI-------WKVNPHPEIANI------YTHLLSE--NTVGKLKRALRLEE---INKES 324
            LE+        ++   HP++A++        H+  E  +    L+R+LR+ +     K+ 
Sbjct: 1096 LERALDLNLELYRTYEHPDVASVLYELGRCLHVQGELDSAREHLERSLRISQSLYRGKQH 1155

Query: 325  VESLVIVSKIAL---EMGSIDQAHAKAMLAMKI 354
                  +  + L    +G +  A A    A++I
Sbjct: 1156 PHVAGALHGLGLVLCALGELHGARAHLERALEI 1188


>gi|254500176|ref|ZP_05112327.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222436247|gb|EEE42926.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 418

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 6/158 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             LA      +S      N      +  ++     Q   A     M+L+       A+  
Sbjct: 123 ARLAAPYAQRLSA--LLPNSPAAQTVVAEVLEKGGQAPQAVAAYRMLLKSAPNHIPALLG 180

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     +    +     A +A +   D  +  + + Q      +   ++   ++  + A 
Sbjct: 181 LARTLLKSKRYDDVISLAVRAAEQDADNYYAFDMLSQALEGRGDLEDSLEAASEALRLAP 240

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               N+  LL   S+     G   A+   A++++    
Sbjct: 241 ----NKTGLLTRLSVICRKLGKFGAALRYALQAVDANP 274


>gi|182679532|ref|YP_001833678.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635415|gb|ACB96189.1| tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 209

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADK-----GDMIASYHDAIESLKLCDNSIM 261
           A   L +  K         A   +              GD   +     ++++L    + 
Sbjct: 94  ARDILEKAYKKDPAALSAGATTSLGVLYYRVPGFPIGFGDTEKARQLLEQAVQLAPTGLD 153

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
           A       L +Q +  KA  +  +  K+ PHP+
Sbjct: 154 ALYFYGDFLYNQKEYAKALDVFVRAQKLPPHPD 186


>gi|220933728|ref|YP_002512627.1| hypothetical protein Tgr7_0543 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995038|gb|ACL71640.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 620

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 102/274 (37%), Gaps = 22/274 (8%)

Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATREFAVYSLYFESCRIGDLNSA 173
           H+EY   LL   + L    ++ A      +L      A R  A + L     + G    A
Sbjct: 70  HHEYEARLLLGGLKLTYGLHDRAETLFRQLLGPEVPAAIRNRAWFHLGRIQYQKGLHEQA 129

Query: 174 QRYATKAL-DISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +    +   ++ P      + ++    +   +++ A   L   + + +  +     L +A
Sbjct: 130 EASLQRMEGELGPALAGERQLLLALNRMARDDFAGAAAALRPWRGSRERADYGDFNLAVA 189

Query: 232 ------RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                 R    A    +  +     ESL L D    A++ AA++L+  ++  +A  +L++
Sbjct: 190 LIQGGDREAGLALLDRLGRARATDAESLALRDR---ANVAAAEALLRADEHARARALLDR 246

Query: 286 IWKVNPHP---EIANIYTHLLSENTVGKL---KRALRLEEINKESVESLVIVSKIALEMG 339
           +    P+     + + +      +    L    R     + +  + E+L+ V    LE+G
Sbjct: 247 VRLDGPYSGRALLWSGWASTELGDPRRALVPWTRLQGHADTDPAAQEALLAVPYAYLELG 306

Query: 340 SIDQAHAKAMLAMKIAPRKEIFL--LLAQIEQAN 371
              +A A    A+     +   L   +A+IE+  
Sbjct: 307 EQTRAAAWFETAVNTLDARRAELRKAMAEIERGE 340


>gi|32471741|ref|NP_864734.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1]
 gi|32397112|emb|CAD72416.1| similar to O-GlcNAc transferase [Rhodopirellula baltica SH 1]
          Length = 678

 Score = 37.6 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 66/209 (31%), Gaps = 16/209 (7%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           A    +A        +      E    L          Q + A  + E  +    T    
Sbjct: 466 AGRFEVAAPRARDAIELLDGDAESQFIL--ADCLRWTGQIDEAVVEFEKGVSAYPTYFRG 523

Query: 157 V--YSLYFESCRIGDLNSAQRYATKAL----DISPDAPWVTEAVVQ-QYVLAKEWSRAIT 209
           V  Y L      +GD ++A+   + A     +  P   W     +   ++ A ++  A  
Sbjct: 524 VQRYGLLL--LELGDNDAAREMFSIATLGWPETDPRH-WAARFQLSIAHLGACDFESA-- 578

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
             +++ +  +E       ++ A +  +   G+   +     + L    N +   +  A +
Sbjct: 579 --HRELQECREHTPGDMDVVFAIAEASVGIGEPEKAIELYEQVLDEFPNDVDTHLNLAHT 636

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI 298
           L+S  +  +A         + P  E A  
Sbjct: 637 LLSTKQTDRAAGHFATALSLAPDNERAQA 665


>gi|323154377|gb|EFZ40578.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14]
 gi|323173577|gb|EFZ59206.1| tetratricopeptide repeat family protein [Escherichia coli LT-68]
 gi|323183118|gb|EFZ68516.1| tetratricopeptide repeat family protein [Escherichia coli 1357]
 gi|332752850|gb|EGJ83235.1| tetratricopeptide repeat family protein [Shigella flexneri K-671]
          Length = 290

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 50  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 107

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 108 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 155


>gi|330916375|ref|XP_003297393.1| hypothetical protein PTT_07786 [Pyrenophora teres f. teres 0-1]
 gi|311329933|gb|EFQ94501.1| hypothetical protein PTT_07786 [Pyrenophora teres f. teres 0-1]
          Length = 580

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 12/143 (8%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                   N A    +       T E         +       +  +   +A  I+P+  
Sbjct: 340 AYEKMGDLNNAITYYQKAQTEHRTPEV-------LAKLRAAEKAKIKKDREAY-INPEEA 391

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +        +W  A+   ++  K A +  R        R+       +  ++  D
Sbjct: 392 EKARELGNAKFKESDWPAAVEAYSEMIKRAPDDPRG----YSNRAACFIKLLEFPSAVQD 447

Query: 249 AIESLKLCDNSIMASICAAKSLI 271
             E++K   + I A +  A++  
Sbjct: 448 CDEAIKRDPSFIRAYLRKAQAYF 470


>gi|302553757|ref|ZP_07306099.1| TPR repeat-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302471375|gb|EFL34468.1| TPR repeat-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 1368

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 73/295 (24%), Gaps = 56/295 (18%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREF-----AVYSLYFESCRIGDLNSAQRYATKALD 182
           Q AL       A E    + Q            A+ +L  +    GD  +A   AT+A++
Sbjct: 354 QAALTT--ATQAVEHYRTLTQTNPAAFLPDLARALNNLAIQKSEAGDRQAALTTATQAVE 411

Query: 183 ISPDAPWVTEAVV------------QQYVLAKEWSRAITFLNQKKKNAKEWNRNR----- 225
                     A               +     +   A+T   +   + +           
Sbjct: 412 HYRTLTEADPAAFLPDLATVLNNLANRQSETGDRQAALTTATEAVHHYRTLTEANPAAFL 471

Query: 226 ---AILLIARSLENADKGDMIASYHDAIESLK------------LCDNSIMASICAAKSL 270
              A  L   +      GD   +   A E+++               +   A    A   
Sbjct: 472 PDLASALNNLANHQRQTGDRRTALATATEAVEHYRTLTEANPAAFLPDLATALNNLANRQ 531

Query: 271 ISQNKKRKAEVILEKI-------WKVNPH---PEIANIY--THLLSENTVGKLKRALRLE 318
                ++ A     +         + NP    P +A       +    T  +        
Sbjct: 532 SETGDRQAALTTATEAVTIRRTLVEANPAVFLPNLAMALNNLAVQQNETGDRQAAFTT-- 589

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANS 372
             + E+VE    +++        D A A   LA            L    E    
Sbjct: 590 --STEAVEHYRTLAEANPAAFLPDLARALNNLANHQRQTGDRRTALATATEAVEH 642


>gi|297690380|ref|XP_002822598.1| PREDICTED: tetratricopeptide repeat protein 36-like [Pongo abelii]
          Length = 189

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 47/141 (33%), Gaps = 11/141 (7%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            Q+  ++   +  +   +  +GDL++A     +A+ + P+         Q   L  + + 
Sbjct: 46  AQLEQSKALELQGVM--AAEVGDLSTALERFGQAICLLPERASAYNNRAQARRLQGDVAG 103

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI------ 260
           A+  L +  + +    R      + R L    +G    +  D   + +L           
Sbjct: 104 ALEDLERAVELSGGRGRAARQSFVQRGLLARLQGRDDDARRDFERAARLGSPFARRQLVL 163

Query: 261 --MASICAAKSLIS-QNKKRK 278
               +    + L     + R+
Sbjct: 164 LNPYAALCNRMLADMMGQLRR 184


>gi|260467132|ref|ZP_05813311.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
 gi|259029144|gb|EEW30441.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
          Length = 545

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 86/285 (30%), Gaps = 40/285 (14%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129
             L      R  +   +A+Y  +++          +   + +  H         LL  Q 
Sbjct: 3   QALQLHQAGRRQEA--EAIYRQVLA----------RQPKHAAAAHFLG------LLLHQT 44

Query: 130 ALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                + +   + +E  +Q+  T       +        +G   +A  +   A+D+ PD 
Sbjct: 45  ----GRSDEGLDLIEQSVQLQPTNPDFLNNFGTVM--RDLGRPAAAIDFFRGAVDLRPDQ 98

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
               + +        ++  A               R R    I  +    + G +  +  
Sbjct: 99  LAARDNLGSSLKQVGQFEEAEEIYRGTVARNPFHVRAR----IGLAETLQEAGRLDEALA 154

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-EN 306
              E+L +              L+ + K  +A  +  +   VN  P +A  +  L   + 
Sbjct: 155 VFSEALTIRPKDADLLHGLGVGLMEKGKLDEAADLFRQALAVN--PGMATAWLMLAQVKR 212

Query: 307 TVGKLKRALRLEEINKESVESLVI-------VSKIALEMGSIDQA 344
              +      +E  + ++ +  +        + K   ++   D+A
Sbjct: 213 QKERDAELAGMEAQHAKAPQGSLARMQLSFGLGKANDDLKDYDRA 257



 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 9/159 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156
                A +++     ++ FH    + L   +      + + A     E +   P   +  
Sbjct: 113 GQFEEAEEIYRGTVARNPFHVRARIGL--AETLQEAGRLDEALAVFSEALTIRPKDADL- 169

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQK 214
           ++ L       G L+ A     +AL ++P     W+  A V++          +  +  +
Sbjct: 170 LHGLGVGLMEKGKLDEAADLFRQALAVNPGMATAWLMLAQVKRQKER---DAELAGMEAQ 226

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
              A + +  R  L       N D  D   ++    E  
Sbjct: 227 HAKAPQGSLARMQLSFGLGKANDDLKDYDRAFDYFAEGN 265


>gi|240080340|ref|ZP_04724883.1| putative periplasmic protein [Neisseria gonorrhoeae FA19]
 gi|240125381|ref|ZP_04738267.1| putative periplasmic protein [Neisseria gonorrhoeae SK-92-679]
          Length = 612

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 129 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 182

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 183 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 242

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 243 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 295

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 296 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 350

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 351 YADRRDYAKVRQWLKK-VSAP 370


>gi|75677210|ref|YP_319631.1| peptidase C14 [Nitrobacter winogradskyi Nb-255]
 gi|74422080|gb|ABA06279.1| Peptidase C14 [Nitrobacter winogradskyi Nb-255]
          Length = 527

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 24/190 (12%)

Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170
             +     +  +  L  +IA    + + A             + +A    Y  +  I D 
Sbjct: 357 KTELALAEDPTIKSLTARIAA---KTDDASALYR------RGQVYASKGAY--ALAIKDF 405

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
           ++  R   K ++   +  WV   + +     ++   A+              RN    L 
Sbjct: 406 DATIRLNPKDVEAYNNRCWVRTVIGELQAARRDCDEALRL-----------RRNFVDALD 454

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           +R L N   G    +  D   +LK+      +     + L  Q     AE  L+      
Sbjct: 455 SRGLLNLKSGANKKAIADFDAALKINPRLTSS--LYGRGLARQRSGAVAEGSLDIANAKA 512

Query: 291 PHPEIANIYT 300
             P+IA  + 
Sbjct: 513 MDPDIAKEFA 522


>gi|33596919|ref|NP_884562.1| putative hemin storage protein [Bordetella parapertussis 12822]
 gi|33566370|emb|CAE37615.1| putative hemin storage protein [Bordetella parapertussis]
          Length = 661

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/225 (9%), Positives = 66/225 (29%), Gaps = 25/225 (11%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +   Y ++ ++ +   A          +P  P+V  +    Y   + +  AI    + 
Sbjct: 138 LGLRGRYADAIKLYEGLRA--------TNTPVHPYVLVSAGNAYAYEERYDEAIACYEEA 189

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-------- 266
              A   + +R     +      D+G    +        K     +  +  A        
Sbjct: 190 LAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQLLQRIEKTSPQYVENAPVAERPNEDYA 249

Query: 267 ------AKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLLSENTVGKLKRALRLEE 319
                 A+ L+   +     + ++ +    P    + N        +   +  +A     
Sbjct: 250 TAQRLRAQYLMYSGETEAGTLAIDALQHDAPFSSGLRNAAASARLGDARPREAKAAFTTA 309

Query: 320 I--NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +    + ++++  +++ ++ +    +A A      +  P      
Sbjct: 310 LAERPDDIQAMTGLARASMALREYPEAEAIVTTLSERFPESSSVR 354


>gi|33600754|ref|NP_888314.1| putative hemin storage protein [Bordetella bronchiseptica RB50]
 gi|33568354|emb|CAE32266.1| putative hemin storage protein [Bordetella bronchiseptica RB50]
          Length = 661

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/225 (9%), Positives = 66/225 (29%), Gaps = 25/225 (11%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +   Y ++ ++ +   A          +P  P+V  +    Y   + +  AI    + 
Sbjct: 138 LGLRGRYADAIKLYEGLRA--------TNTPVHPYVLVSAGNAYAYEERYDEAIACYEEA 189

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-------- 266
              A   + +R     +      D+G    +        K     +  +  A        
Sbjct: 190 LAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQLLQRIEKTSPQYVENAPVAERPNEDYA 249

Query: 267 ------AKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLLSENTVGKLKRALRLEE 319
                 A+ L+   +     + ++ +    P    + N        +   +  +A     
Sbjct: 250 TAQRLRAQYLMYSGETEAGTLAIDALQHDAPFSSGLRNAAASARLGDARPREAKAAFTTA 309

Query: 320 I--NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +    + ++++  +++ ++ +    +A A      +  P      
Sbjct: 310 LAERPDDIQAMTGLARASMALREYPEAEAIVTTLSERFPESSSVR 354


>gi|70995249|ref|XP_752386.1| cell cycle control protein (Cwf4) [Aspergillus fumigatus Af293]
 gi|74672728|sp|Q4WT84|CLF1_ASPFU RecName: Full=Pre-mRNA-splicing factor clf1
 gi|66850021|gb|EAL90348.1| cell cycle control protein (Cwf4), putative [Aspergillus fumigatus
           Af293]
          Length = 676

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 90/275 (32%), Gaps = 32/275 (11%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  + ++P ++  A++  Y    +  GD              +Y  + L 
Sbjct: 257 KEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLEN 236
            +P    V     +    + +  R      +        +  + W R   + +     E 
Sbjct: 316 ENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEE 375

Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +  D+  +     E LKL            +  A+  I Q   + A   L +   + P 
Sbjct: 376 MEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPK 435

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKA 348
            ++   Y  L  E  + +  R   L E     N  + +S +  +++   +   ++A A  
Sbjct: 436 DKLFRGYIDL--ERQLFEFVRCRTLYEKQIEWNPANSQSWIKYAELERGLDDSERARAIF 493

Query: 349 MLAMK---IAPRKEIFLLLAQIEQANSHNTDKILY 380
            L +    +   + ++      E+      D++  
Sbjct: 494 ELGIDQPMLDMPELVWKAYIDFEEYE-GEYDRVRQ 527


>gi|332667516|ref|YP_004450304.1| Serine 3-dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332336330|gb|AEE53431.1| Serine 3-dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 951

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE---EINK 322
           A+ L++  +       +++  K  P   E+   Y  +L++NT        +L    EI+ 
Sbjct: 368 ARGLVASGQVESGITFMKQAIKTYPGSAELHYFYGLILAQNTRDLNGALEQLALATEIDP 427

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +   +  ++ ++A   G  + A       ++I 
Sbjct: 428 DHEAAFFLLGELAEHQGDFNAARKHYERLVEIN 460


>gi|240112549|ref|ZP_04727039.1| putative periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|240120826|ref|ZP_04733788.1| putative periplasmic protein [Neisseria gonorrhoeae PID24-1]
 gi|268598617|ref|ZP_06132784.1| periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|268582748|gb|EEZ47424.1| periplasmic protein [Neisseria gonorrhoeae MS11]
          Length = 614

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 72  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 131 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 184

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 185 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 244

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 245 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 297

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 298 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 352

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 353 YADRRDYAKVRQWLKK-VSAP 372


>gi|227535135|ref|ZP_03965184.1| tetratricopeptide repeat family protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187180|gb|EEI67247.1| tetratricopeptide repeat family protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 422

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 73/248 (29%), Gaps = 42/248 (16%)

Query: 160 LYFESCRIGDLNSAQRYATKALDIS----------------PDAPWVTEAVVQQYVLAKE 203
           L+ +     D  +    A +   +                 PD   +  A+    V   +
Sbjct: 22  LFTQVLAHDDDETQYNLAEELYALGFNGQAKRLYQGLLGRYPDQGDLATALADIAVSDGD 81

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A+ +L++ +     + ++    L++ +      G    S    +E+ +L  +  + +
Sbjct: 82  TDAALNYLSRIQPGDPAYVQS----LVSAADVYQTLGLYEVSEQKLLEAKRLAPDEPVVT 137

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
               +         +A       +       +A   T L   N   +L  +L      ++
Sbjct: 138 FALGEFYFDWGHFAEA----ISAYNE----LLAAGTTELAGVNIEARLAASLAQTGQYED 189

Query: 324 ---SVE----------SLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
              + E              +  + L++    +A       +   P     +L LA+  +
Sbjct: 190 AVAAYEDVGVDALDLNGRFELGGLYLQLDDPAKAITNLQAVIDSDPSYANAYLPLARAYE 249

Query: 370 ANSHNTDK 377
           A +     
Sbjct: 250 AQNQPDKA 257



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 58/195 (29%), Gaps = 22/195 (11%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC- 165
              +  +    +E +V     +       +  A      +L    T    V     E+  
Sbjct: 121 QKLLEAKRLAPDEPVVTFALGEFYFDWGHFAEAISAYNELLAAGTTELAGVN---IEARL 177

Query: 166 -----RIGDLNSAQRYAT----KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
                + G    A          ALD++         +   Y+   + ++AIT L     
Sbjct: 178 AASLAQTGQYEDAVAAYEDVGVDALDLNGRFE-----LGGLYLQLDDPAKAITNLQAVID 232

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
           +   +    A   +  +     +     +       + + D +        K  +S++  
Sbjct: 233 SDPSY----ANAYLPLARAYEAQNQPDKALDTVQAGVMVDDTNPTLYALGGKLALSEDNV 288

Query: 277 RKAEVILEKIWKVNP 291
           + AE  L+K   ++P
Sbjct: 289 KLAETYLQKALAIDP 303


>gi|218706785|ref|YP_002414304.1| lipoprotein NlpI [Escherichia coli UMN026]
 gi|293406775|ref|ZP_06650701.1| lipoprotein nlpI [Escherichia coli FVEC1412]
 gi|298382515|ref|ZP_06992112.1| lipoprotein nlpI [Escherichia coli FVEC1302]
 gi|300897927|ref|ZP_07116306.1| lipoprotein NlpI [Escherichia coli MS 198-1]
 gi|331664777|ref|ZP_08365682.1| lipoprotein NlpI [Escherichia coli TA143]
 gi|218433882|emb|CAR14799.1| lipoprotein precursor [Escherichia coli UMN026]
 gi|284923187|emb|CBG36281.1| TPR repeat lipoprotein [Escherichia coli 042]
 gi|291426781|gb|EFE99813.1| lipoprotein nlpI [Escherichia coli FVEC1412]
 gi|298277655|gb|EFI19171.1| lipoprotein nlpI [Escherichia coli FVEC1302]
 gi|300358357|gb|EFJ74227.1| lipoprotein NlpI [Escherichia coli MS 198-1]
 gi|331058025|gb|EGI30007.1| lipoprotein NlpI [Escherichia coli TA143]
          Length = 294

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|219123127|ref|XP_002181882.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406483|gb|EEC46422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 765

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 26/217 (11%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           ++G+  +A+    ++L +    P   +A  V++          A T      K A     
Sbjct: 542 KLGNEVNARMLFERSLLVDEKHPQAWQAWGVMELRA--GNTLTAQTLFECGIKAAP---- 595

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               L +A ++     G+   +       +K     I      A   + +     A+ ++
Sbjct: 596 KHGALWLAYAISEGRLGNPETARSLFANGIKHSPRHIPLYQAWASLELREANYNAAKALI 655

Query: 284 EKI----------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
            +           W V      A I   L +   V  + R     E    + E    +  
Sbjct: 656 SEALTRDKRNGSGWLVA-----AEIEKSLGNAGLVNLILRRG--IECAPTNAELYRALGD 708

Query: 334 IALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
             L+ G++ +A       + + P    ++  LA++E 
Sbjct: 709 SLLQRGNVLEAREIFEKGIDVDPLHAPLYHSLAELEA 745


>gi|116494868|ref|YP_806602.1| TPR repeat-containing protein [Lactobacillus casei ATCC 334]
 gi|191638375|ref|YP_001987541.1| TPR repeats containing protein [Lactobacillus casei BL23]
 gi|239631538|ref|ZP_04674569.1| TPR repeat-containing protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066429|ref|YP_003788452.1| TPR repeat-containing protein [Lactobacillus casei str. Zhang]
 gi|116105018|gb|ABJ70160.1| TPR repeats containing protein [Lactobacillus casei ATCC 334]
 gi|190712677|emb|CAQ66683.1| TPR repeats containing protein [Lactobacillus casei BL23]
 gi|239526003|gb|EEQ65004.1| TPR repeat-containing protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438836|gb|ADK18602.1| TPR repeats containing protein [Lactobacillus casei str. Zhang]
 gi|327382403|gb|AEA53879.1| TPR repeat-containing protein YpiA [Lactobacillus casei LC2W]
 gi|327385604|gb|AEA57078.1| TPR repeat-containing protein YpiA [Lactobacillus casei BD-II]
          Length = 422

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 73/248 (29%), Gaps = 42/248 (16%)

Query: 160 LYFESCRIGDLNSAQRYATKALDIS----------------PDAPWVTEAVVQQYVLAKE 203
           L+ +     D  +    A +   +                 PD   +  A+    V   +
Sbjct: 22  LFTQVLAHDDDETQYNLAEELYALGFNGQAKRLYQGLLGRYPDQGDLATALADIAVSDGD 81

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A+ +L++ +     + ++    L++ +      G    S    +E+ +L  +  + +
Sbjct: 82  TDAALNYLSRIQPGDPAYVQS----LVSAADVYQTLGLYEVSEQKLLEAKRLAPDEPVVT 137

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323
               +         +A       +       +A   T L   N   +L  +L      ++
Sbjct: 138 FALGEFYFDWGHFAEA----ISAYNE----LLAAGTTELAGVNIEARLAASLAQTGQYED 189

Query: 324 ---SVE----------SLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369
              + E              +  + L++    +A       +   P     +L LA+  +
Sbjct: 190 AVAAYEDVGVDALDLNGRFELGGLYLQLDDPAKAITNLQAVIDSDPSYANAYLPLARAYE 249

Query: 370 ANSHNTDK 377
           A +     
Sbjct: 250 AQNQPDKA 257


>gi|29833873|ref|NP_828507.1| LuxR family transcriptional regulator [Streptomyces avermitilis
           MA-4680]
 gi|29610998|dbj|BAC75042.1| putative LuxR-family transcriptional regulator [Streptomyces
           avermitilis MA-4680]
          Length = 900

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKA 279
             A   IA +     +G+  A+   A  ++     S  A    ++ A+ + +++ +   A
Sbjct: 644 REAGRAIATARLLLARGNPHAAIEAAGPAVAADVVSPWAEGHTALVASAAHLAEGRPEAA 703

Query: 280 EVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKE-SVESLVIVSKIA 335
             +L+ +    P   +      L        +  L R      I    +V + ++ ++ A
Sbjct: 704 AELLQAVPDDQPACAVGAARAQLAAGNPGAAIDLLDRLHPKGRIGPGVTVRASLVRAQAA 763

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEI 360
              G    +      A++ A R+ +
Sbjct: 764 DAAGDSATSRRLVAQALQEARRERL 788


>gi|39936746|ref|NP_949022.1| TPR repeat-containing protein [Rhodopseudomonas palustris CGA009]
 gi|39650602|emb|CAE29125.1| TPR repeat [Rhodopseudomonas palustris CGA009]
          Length = 269

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 5/127 (3%)

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE 294
           N    D   +   A +  +   N   A+I    +L +  ++ +A  +LEK    NP +  
Sbjct: 48  NEASTDPNRAVEIAGDRYRSRPNDPDAAIAYGNALRAIGQRAQAVAVLEKASLANPSNKA 107

Query: 295 IANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIAL--EMGSIDQAHAKAMLA 351
           +   Y   L++N   +L     L   +  ++ +  ++  +  +  +MG  ++A      A
Sbjct: 108 VRAAYGRALADNGNFQLA-FDTLSRAHSPDNPDWRILSVQGTVLDQMGRNEEARRYYASA 166

Query: 352 MKIAPRK 358
           +++AP +
Sbjct: 167 LRLAPDE 173


>gi|320104239|ref|YP_004179830.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319751521|gb|ADV63281.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 364

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 4/123 (3%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           E ++  A E     ++         Y+      R+G ++ A     +A+ + PD P+  +
Sbjct: 243 EGRFEEAIEHFTQAIRRQPLGFKGYYNRGQAFYRLGRVDKALEDLDEAVRLQPDDPYPRQ 302

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A      L K   +AI   +   +           L   R L    KGD  A+  D   +
Sbjct: 303 ARGTVNSLLKRHDQAIEDFSAAIRANPT----NPALYRQRGLAYRAKGDEEAAQRDFATA 358

Query: 253 LKL 255
            KL
Sbjct: 359 RKL 361


>gi|298711001|emb|CBJ32307.1| Tetratricopeptide repeat containing protein [Ectocarpus
           siliculosus]
          Length = 1260

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 74/259 (28%), Gaps = 58/259 (22%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161
            +  +   +     +  L  +L         + +Y  A    +                 
Sbjct: 434 ARCQAIQERVLGPEHPGLTAVLHNRADFLEMQGKYEEAERLCQR---------------- 477

Query: 162 FESCRIGDLNSAQRYATKALD-ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
                      +   + KAL    PD       +        +++ A     + +   + 
Sbjct: 478 -----------SIAISEKALGPDHPDVASSQHTLAGLLQSQGKYAEAGPLYARCQAIQEA 526

Query: 221 W----NRNRAILLIARSLENADKGDMIAS-----YHDAIESLKLCDNSI-MASIC--AAK 268
                +   A  L   +    ++G    +        AIE   L  +   +A+     A 
Sbjct: 527 VLGPEHPRLATTLGNWAALLYEQGKPEEAEALFKRSLAIEEKALGPDHPDVATPLNNLAC 586

Query: 269 SLISQNKKRKAEVILEKIWKVN-----P-HPEIANIYTHL--------LSENTVGKLKRA 314
            L  Q K  +A  + E+   +      P HP +A    +L         +E     L+R+
Sbjct: 587 LLEDQGKYVEAGRLFERSLAIREKVLGPDHPNVAATLINLAESFQREGKNEEAARLLERS 646

Query: 315 LRLE--EINKESVESLVIV 331
           L +    +  +  +  V++
Sbjct: 647 LGITKKALGPDHPDVAVVL 665


>gi|298491604|ref|YP_003721781.1| tetratricopeptide repeat-containing protein ['Nostoc azollae' 0708]
 gi|298233522|gb|ADI64658.1| Tetratricopeptide repeat protein ['Nostoc azollae' 0708]
          Length = 285

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 14/144 (9%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------- 176
           +L  Q          A +    +L        A+  +           +A          
Sbjct: 120 VLLAQAKQQIADNEGAAQTYRSILATKPGDLKALQGMVNLQISQQRPEAAIGLLQDTLSA 179

Query: 177 ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           AT+A  I P +      + ++   Y   K  ++AI+   Q  K  K+    R +L  A++
Sbjct: 180 ATQANTIQPGSVDVVAVQVLLGSVYAFQKNDTQAISIYEQAIK--KDPQDFRPVL--AKA 235

Query: 234 LENADKGDMIASYHDAIESLKLCD 257
           +   ++G +  +      +  L  
Sbjct: 236 MLLKEQGKVEEAKLLFETARALAP 259



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     +I D   A +     L   P      + +V   +  +    AI  L      A 
Sbjct: 122 LAQAKQQIADNEGAAQTYRSILATKPGDLKALQGMVNLQISQQRPEAAIGLLQDTLSAAT 181

Query: 220 EWNRNR-------AILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLI 271
           + N  +       A+ ++  S+    K D   +     +++K    +     +  A  L 
Sbjct: 182 QANTIQPGSVDVVAVQVLLGSVYAFQKNDT-QAISIYEQAIKKDPQDFRP-VLAKAMLLK 239

Query: 272 SQNKKRKAEVILEKIWKVNP 291
            Q K  +A+++ E    + P
Sbjct: 240 EQGKVEEAKLLFETARALAP 259


>gi|283782085|ref|YP_003372840.1| hypothetical protein Psta_4333 [Pirellula staleyi DSM 6068]
 gi|283440538|gb|ADB18980.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 844

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 60/319 (18%), Positives = 113/319 (35%), Gaps = 58/319 (18%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQY-------- 136
           L   L  + A +   AR++ + +        E L    ++L   +A   +++        
Sbjct: 77  LAMALERLDAGDDHQARQIAAQLRSDPNTAYEALGGPFFVLGAVMANDAQRHVNDHEQRM 136

Query: 137 --NIAHEKLEMM-------LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-D 186
              IA   LE          +    +      LY    R      +      AL  +P  
Sbjct: 137 LFRIAARYLEESERYGFPPAREAEAKLLMGKCLY----RAARYAQSAAALEDALLSNPLR 192

Query: 187 APWVTEAVVQ--QYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDM 242
           A  + + +      V      +A+  L   ++ K+  E +R+R +LL  + L   DK   
Sbjct: 193 AAEIHQLLADCYLRVSPPALDKALVHLRQLRRIKDLPEEDRSRGLLLEGQVLLAQDK--- 249

Query: 243 IASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAE------VILEKIWKVN-- 290
                DA+ ++         S  A++ AA+  ++Q ++ KA        I++ +  +   
Sbjct: 250 ---LEDALSAMANIPKESNVSREAAVTAARIRLTQAQRDKATPTATYQQIIDNMRALQQG 306

Query: 291 --PHPE--------IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             P  +        I   Y  +   E  + +L R  +L     ES+ + V  ++IA+E  
Sbjct: 307 LPPTSDVTAQSQLMIGLAYRQIGDTEAALAQLARVRKLHYGRPESLFATVNEAEIAVERR 366

Query: 340 SIDQAHAKAMLAMKIAPRK 358
               A      AM+ AP  
Sbjct: 367 QPLAATTLLERAMQDAPPA 385


>gi|302925412|ref|XP_003054090.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735031|gb|EEU48377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 673

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 86/247 (34%), Gaps = 30/247 (12%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA--------QRYATKALDI 183
           ++Y  A    +  + ++P ++   ++  Y    +  GD +          + +  + +  
Sbjct: 257 KEYERARAIYKYALDRLPRSKSAILHKAYTTFEKQFGDRDGVEDVVLSKRRVHYEELIKE 316

Query: 184 SPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLE 235
           +P     W   A +++     +  R      +        +  + W R   + +     E
Sbjct: 317 NPKNYDAWFDYAKLEESSQ--DLDRIRDVYERAVAQVPPTQEKRHWRRYIYLWIFYAIWE 374

Query: 236 NADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             +  D+  +       LKL            + AA+  I Q +   A  +L     + P
Sbjct: 375 EMEGQDIERTRQIYKTCLKLIPHKKFTFAKIWLLAAQFEIRQGELTAARKLLGNAIGMCP 434

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAK 347
             +I + Y  L  E  + +  R   L     E N  + ++ +  +++   +  +D+  A 
Sbjct: 435 KDKIFDGYVDL--ERKLFEFVRCRTLYEKHIEYNPANCQTWIKFAELERGLDDLDRTRAI 492

Query: 348 AMLAMKI 354
             LA++ 
Sbjct: 493 FELAVQQ 499


>gi|255019337|ref|ZP_05291459.1| hypothetical protein ACA_1625 [Acidithiobacillus caldus ATCC
          51756]
 gi|254971223|gb|EET28663.1| hypothetical protein ACA_1625 [Acidithiobacillus caldus ATCC
          51756]
          Length = 110

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 11/94 (11%)

Query: 1  MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60
          M  ++ +  +I  +   F + ++ P    +T+ +  ++ S  V+L I +   F   L+F 
Sbjct: 1  MWMILSF--IIGALAVLFAVENNAP--AKVTFLSWEFQQSLGVVLLIGFLAGFVAALIFY 56

Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMS 94
          +       P  L H    R ++K    +   L +
Sbjct: 57 L-------PTYLRHRWRIRRHEKRIAEVEADLAA 83


>gi|198475689|ref|XP_001357117.2| GA18121 [Drosophila pseudoobscura pseudoobscura]
 gi|198137915|gb|EAL34183.2| GA18121 [Drosophila pseudoobscura pseudoobscura]
          Length = 961

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 77/271 (28%), Gaps = 45/271 (16%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            +          + +   +              G    A++   +A+   P+   V   +
Sbjct: 608 DWRDEESLYRSAIAVNPPKALGNLGSVL--SSQGRYEEAKQVLQEAIRYRPNMADVHFNL 665

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              +   ++++ A+    +  K    +  N A+  +   +     G    +         
Sbjct: 666 GILHQNQQDYAAAVECFQRAIK----FRPNLAVAYLNLGISFIALGKRQQAMEILQAGAT 721

Query: 255 LCDNSI-----------MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           L   S+            A +      + Q K ++A  +  + +   P            
Sbjct: 722 LDGASVRDRGAHDQARSSAYLQLGALYVEQGKLQRALAVYREAFSSLP------------ 769

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 +      L +   +      ++ ++       D+A      A+++ P +    L
Sbjct: 770 -GLPQQR----EVLYQRIGD------VLGRL----QQWDEAERHHRAALELQPNQVAAHL 814

Query: 364 LAQIEQANSHN-TDKILYWTQSALHAMPDPL 393
              I  A + + + +   W + AL   PD  
Sbjct: 815 SYGITLARNSSRSAEAEMWFKRALKLAPDQA 845


>gi|170696043|ref|ZP_02887180.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
 gi|170139035|gb|EDT07226.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
          Length = 603

 Score = 37.6 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 68/238 (28%), Gaps = 43/238 (18%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + + G L++A     + L I P            +    + + A T ++   K+    +R
Sbjct: 33  AHQAGRLDTADSIYREVLAIDPANARALHYFGVLHYQRGQHADAATLMSHALKH----DR 88

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           + A     R L  A  G +  +     ++L+L  +   A      +L +Q    +A    
Sbjct: 89  HNAACWSNRGLAAAALGYLDEATICYDQALQLQPDFADARNNFGVALQAQGALNEAVEQY 148

Query: 284 EKIWKVNP-----HPEIANI-------------YTHLLSENT------------------ 307
                 NP     H  +                Y   L  +                   
Sbjct: 149 RLAIASNPAFVDAHLNLGTALGKLGNFTEALACYRDALQLDANSAEAHFNAGNAHNALGE 208

Query: 308 -VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK--AMLAMKIAPRKEIFL 362
               +    R   +  +  E+ + +     + G    A +     +A+   P   + L
Sbjct: 209 HEAAVASFERALALRPDYAEAHINLGSAIGKRGDYAGAESHYRRAVALNPNPTNLVCL 266



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 49/163 (30%), Gaps = 5/163 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             +  A       LQ+ A    A ++       +G+  +A     +AL + PD       
Sbjct: 173 GNFTEALACYRDALQLDANSAEAHFNAGNAHNALGEHEAAVASFERALALRPDYAEAHIN 232

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
           +        +++ A +   +             +     +    D+ +         ++L
Sbjct: 233 LGSAIGKRGDYAGAESHYRRAVALNPNPTNLVCLGGSLGAQGRLDEEETF-----YRDAL 287

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               +   A    A  L+ +   ++        W+ + +  +A
Sbjct: 288 ARDPDYADAHQNLAWLLLKRGDYKQGWAEFALRWRKSDYDALA 330


>gi|330992317|ref|ZP_08316265.1| Protein flbA [Gluconacetobacter sp. SXCC-1]
 gi|329760516|gb|EGG77012.1| Protein flbA [Gluconacetobacter sp. SXCC-1]
          Length = 534

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 59/190 (31%), Gaps = 21/190 (11%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAIL 228
             +A+    +A   +P A    + ++   +       A   L   +++  ++   +  + 
Sbjct: 55  QEAARLLCRQAAA-NPGARHPAQDMLDLLLPHDRVDEAEAVLRAIRQRAGQDIRTHDMLG 113

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            +        +G    +     + L L    +      A  L+ Q +      +L   + 
Sbjct: 114 EL-----LLQRGRTAEAQAVLADGLALSPAQLSTGNLMAVCLMEQGEFAAGRDLLR--YI 166

Query: 289 VNPHPEIANIYTHLL--------SENTVGKLKRALRL----EEINKESVESLVIVSKIAL 336
           +  HP+ A  + +L         +E  +     AL L      +      +L+   ++A 
Sbjct: 167 LQHHPDSAMTHANLAHLLGAWNHNEEALQAHGHALSLRPEDARLRLNHALTLLKTGRMAE 226

Query: 337 EMGSIDQAHA 346
                +    
Sbjct: 227 GWAEYEWRRR 236


>gi|328951357|ref|YP_004368692.1| putative PAS/PAC sensor protein [Marinithermus hydrothermalis DSM
           14884]
 gi|328451681|gb|AEB12582.1| putative PAS/PAC sensor protein [Marinithermus hydrothermalis DSM
           14884]
          Length = 656

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 16/53 (30%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
             +I     +   A      ML +   RE A   L     R G+   A+    
Sbjct: 579 TAEILERLGRAREAIAAYRRMLTLDPWREEAYRGLLRILVREGERAEARAVFE 631


>gi|310791974|gb|EFQ27501.1| tetratricopeptide [Glomerella graminicola M1.001]
          Length = 1413

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 30/206 (14%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQK 214
            +Y+ +    D   A+R   KA+++S       + + + +    +W R    A   ++  
Sbjct: 577 GIYY-ADYAKDKKRARRCFQKAVELSSSEVEAAKRLAESFADEGDWDRVELVAQRVVDSG 635

Query: 215 KKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272
           K      ++ + I     +L  A+  K D   S      +L++      + +   +S  S
Sbjct: 636 KVRPPPGSKRKGISWPFSALGVAELNKQDFHKSIVSFQSALRIHPEDYHSWVGLGESYYS 695

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
             +   A   +    K+               E T+     A  L     ++  +  +++
Sbjct: 696 SGRYIAATKAILNAQKL---------------EETIP----AETLG----DTWFTKYMLA 732

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358
            +  E+   D+A A     +   P +
Sbjct: 733 NVKRELAEFDEAIALYQDVIDGRPDE 758


>gi|326779729|ref|ZP_08238994.1| transcriptional regulator, SARP family [Streptomyces cf. griseus
            XylebKG-1]
 gi|326660062|gb|EGE44908.1| transcriptional regulator, SARP family [Streptomyces cf. griseus
            XylebKG-1]
          Length = 1020

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 8/100 (8%)

Query: 164  SCRIGDLNSAQRYATKALDISP------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
            +   G    A+ +A +AL+++           V   V      A  +  A+       ++
Sbjct: 907  AHARGRTAEAEEFAVRALELARSGATPVRLTEVENLVGHLRSEAGAYESALELHRHAHRS 966

Query: 218  AKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            A    +    A  L   +      GD  ++     E+ +L
Sbjct: 967  AVNMGFRSEEASALTGLARALEALGDEESAREHRTEAARL 1006


>gi|218196480|gb|EEC78907.1| hypothetical protein OsI_19302 [Oryza sativa Indica Group]
 gi|222630974|gb|EEE63106.1| hypothetical protein OsJ_17914 [Oryza sativa Japonica Group]
          Length = 756

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 27/280 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREF 155
             +  AR+++   +       +  V  +   +     R+   A    +  + ++P  +  
Sbjct: 255 GEVERARQVYQRAADLLADDEDAQVLFVAFAEFEERCREVERARAIYKYALDRVPKGQAE 314

Query: 156 AVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +Y  +    +  GD            +      +  +P         ++         R
Sbjct: 315 ELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNNDR 374

Query: 207 AITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD--- 257
                 +   N    +  R       L I  +L E  D  D+  +     E LKL     
Sbjct: 375 IREVYERAIANIPPADEKRYWQRYIYLWINYALYEELDAKDVERTREVYSECLKLVPHKK 434

Query: 258 -NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
                  + AA+  I Q   + A  IL     ++P  +I   Y  +  E  +G   R   
Sbjct: 435 FTFAKMWLMAAQFEIRQRNLKAARQILGNAIGMSPKGKIFKKYIEI--ELYLGNFDRCRT 492

Query: 317 LE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L     E +  +  +    +++   +   D+A +   LA+
Sbjct: 493 LYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAI 532


>gi|167522395|ref|XP_001745535.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775884|gb|EDQ89506.1| predicted protein [Monosiga brevicollis MX1]
          Length = 517

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 42/141 (29%), Gaps = 15/141 (10%)

Query: 152 TREFAVYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQ-YVLAKEWSRAIT 209
           TR     +L+     +G+    A   A  A +      W  +A++   Y     +  A  
Sbjct: 191 TRPILAKALFLYILHVGEQPVKALELAAHATEYEEFKDWWWKAMLGFSYHRLGMYRDAER 250

Query: 210 FLNQKKKNAKEWNRNRAILLIAR--SLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
            L           R RA +  A   +           +     ++LK   +  +    AA
Sbjct: 251 QLQSSL-------RQRATIFGAMLLAKVYIRLDQPQNALRVYHDALKQFPDETVLLAAAA 303

Query: 268 KSLISQNKKRKAE----VILE 284
           +         +A      +LE
Sbjct: 304 RVYEGIGDLSRAVSEYRKLLE 324


>gi|145235423|ref|XP_001390360.1| import receptor subunit tom-70 [Aspergillus niger CBS 513.88]
 gi|134058042|emb|CAK38271.1| unnamed protein product [Aspergillus niger]
          Length = 629

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 69/182 (37%), Gaps = 9/182 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+     ++  A +  +  + +  T  ++   L     ++G + SA     +++    
Sbjct: 416 RAQLHFILGEFAEAAKDYQKSIDLDRTFIYSHIQLGVTQYKMGSVASAMATFRRSVKNFE 475

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENAD-KGDM 242
           + P V     +  +  + +S AI   ++  +  K+        + LI ++L     K D 
Sbjct: 476 EVPDVYNYYGELLLDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDF 535

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             + +   ++L +     +A    A+ L+ Q K  +A    E+        E+A     +
Sbjct: 536 QEAENLCQKALIIDPECDIAVGTMAQLLLQQGKVSQALKYFERA------AELARTEAEI 589

Query: 303 LS 304
           ++
Sbjct: 590 IN 591


>gi|108758166|ref|YP_629313.1| O-antigen polymerase family protein [Myxococcus xanthus DK 1622]
 gi|108462046|gb|ABF87231.1| O-antigen polymerase family protein [Myxococcus xanthus DK 1622]
          Length = 889

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 62/163 (38%), Gaps = 8/163 (4%)

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L    +     +GD+  +     +  +L  +++   +  A+ L +Q K+ +A  +L
Sbjct: 663 EAAALWAREARLRILRGDLETAEAARAQVERLAPDALDTHLLRAEVLRAQGKREEALRVL 722

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINK---ESVESLVIVSKIALEMG 339
           E++    P   +A  +     +   G  +RA   L+ +     +  +   +++  A  + 
Sbjct: 723 EQMLARFPG-NVALSFQLAAQQLDAGLTRRAKDTLQALAPFITDYAQRARLLAMEAACLE 781

Query: 340 SIDQ---AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
                  A  +   A ++ P  + F  +A+ ++A         
Sbjct: 782 REGLLSHALERRQTAARLVPGADAFFAVARTQEALRRYDAAAR 824


>gi|47221111|emb|CAG12805.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 181

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 33/97 (34%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GDL  A +  ++A++I P          Q   L  + + A+  L++    +    R
Sbjct: 57  AAEAGDLQGALQLFSQAIEILPQRASAYNNRAQALRLRGDTAGALEDLDRAVALSGGRGR 116

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
                L+ R L          +  D  ++  L     
Sbjct: 117 TARQSLVQRGLLRRLSDQEADARADFEKAAALGSEFA 153


>gi|84502390|ref|ZP_01000526.1| TPR domain protein [Oceanicola batsensis HTCC2597]
 gi|84389202|gb|EAQ01999.1| TPR domain protein [Oceanicola batsensis HTCC2597]
          Length = 619

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 91/312 (29%), Gaps = 65/312 (20%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-------EFA 156
            ++            E L  L E   AL++     A +     L  P TR        + 
Sbjct: 13  ARIAKASKIYGIKGEESL-DLHEAYRALSQNDVMRAVQ-----LAHPITRSHPKSVHAWV 66

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAITFLNQ 213
           V      + R GD  +A+ +  +ALD +P+       + +  VL    ++  R       
Sbjct: 67  VMGGAALAQREGD--TAEAFFQRALDFAPNETSALVGLAKAQVLQVKPEDAVRVAARAFA 124

Query: 214 KKKNAKEWNRNRAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAAKSL 270
              + K        L+               ++    DA   +KL           A  L
Sbjct: 125 AGADEKGLVNLYMELMRQMGRVQVATDVVIPVLKKLEDAELCMKL-----------ADML 173

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--------- 321
               +  KA V L++ W+++P PE+  I   L       +L++A  L             
Sbjct: 174 TDIEETAKAAVWLDRAWRLDPEPEVYRI-GRLRGLIYSRRLEQADELANALMADPATQDK 232

Query: 322 -------------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368
                            E  + +++          A   A L      R  +  +L  I 
Sbjct: 233 DSVLLYKVLILRISNRPEEALALAEAH----EFTSAERYAEL------RGIVANILQDIG 282

Query: 369 QANSHNTDKILY 380
           +        +  
Sbjct: 283 RGEEAGDAYLEG 294


>gi|313837503|gb|EFS75217.1| tetratricopeptide repeat protein [Propionibacterium acnes HL037PA2]
 gi|314927290|gb|EFS91121.1| tetratricopeptide repeat protein [Propionibacterium acnes HL044PA1]
 gi|314972709|gb|EFT16806.1| tetratricopeptide repeat protein [Propionibacterium acnes HL037PA3]
          Length = 151

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 165 CRIGDLNSAQRYATK--ALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
             +G   +A R   +  A D++P     +            +   A+  L    KN    
Sbjct: 16  RALGRPQAALRLIREGQAADLNPSQQVELVLVQAGARCDLGQRDEAVRVLRDAVKNLTAP 75

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
               A L  A +    + GD   +      + K   
Sbjct: 76  TEATARLHYAYAETLLEDGDTAGARTWFASAQKHDP 111


>gi|260576114|ref|ZP_05844107.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
 gi|259021594|gb|EEW24897.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
          Length = 385

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 28/85 (32%)

Query: 33  GNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGL 92
           G       P ++ +IL      W L         + P  +     +   D G   +  G+
Sbjct: 67  GGTPSLMRPELVSAILARVRATWTLANDCEITLEANPGSVEAGRFRGYRDAGVNRVSMGI 126

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFH 117
            ++A  ++    + HS    +  F 
Sbjct: 127 QALADGDLRALGRAHSVAEARAAFD 151


>gi|223935925|ref|ZP_03627840.1| hypothetical protein Cflav_PD4635 [bacterium Ellin514]
 gi|223895526|gb|EEF61972.1| hypothetical protein Cflav_PD4635 [bacterium Ellin514]
          Length = 706

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 11/159 (6%)

Query: 126 EVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           E Q+ L ++ +  A +   E      +T   ++     ES   GD  +      +AL  +
Sbjct: 183 EAQVNLHQKNFERALQLYLEQYAGGDSTAVLSLRFAAMESL-SGDPATL-----EALAKN 236

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           P    V  A +        +  A+  +N      +             +L     G+M  
Sbjct: 237 PRTRKVITAFLISQAKPPRFENAVPAVNAWLAAVEAAGMRDVEAAEQLALAAYQNGEMEL 296

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           + H    S     NS  A    AK L+   K +KA  +L
Sbjct: 297 AQHWIDRSR----NSTTAQWLQAKLLLRAGKIQKAAAVL 331


>gi|195160126|ref|XP_002020927.1| GL16428 [Drosophila persimilis]
 gi|194117877|gb|EDW39920.1| GL16428 [Drosophila persimilis]
          Length = 1006

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 77/271 (28%), Gaps = 45/271 (16%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
            +          + +   +              G    A++   +A+   P+   V   +
Sbjct: 653 DWRDEESLYRSAIAVNPPKALGNLGSVL--SSQGRYEEAKQVLQEAIRYRPNMADVHFNL 710

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              +   ++++ A+    +  K    +  N A+  +   +     G    +         
Sbjct: 711 GILHQNQQDYAAAVECFQRAIK----FRPNLAVAYLNLGISFIALGKRQQAMEILQAGAT 766

Query: 255 LCDNSI-----------MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           L   S+            A +      + Q K ++A  +  + +   P            
Sbjct: 767 LDGASVRDRGAHDQARSSAYLQLGALYVEQGKLQRALAVYREAFSSLP------------ 814

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                 +      L +   +      ++ ++       D+A      A+++ P +    L
Sbjct: 815 -GLPQQR----EVLYQRIGD------VLGRL----QQWDEAERHHRAALELQPNQVAAHL 859

Query: 364 LAQIEQANSHN-TDKILYWTQSALHAMPDPL 393
              I  A + + + +   W + AL   PD  
Sbjct: 860 SYGITLARNSSRSAEAEMWFKRALKLAPDQA 890


>gi|167765284|ref|ZP_02437397.1| hypothetical protein BACSTE_03672 [Bacteroides stercoris ATCC
           43183]
 gi|167696912|gb|EDS13491.1| hypothetical protein BACSTE_03672 [Bacteroides stercoris ATCC
           43183]
          Length = 319

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 85/232 (36%), Gaps = 10/232 (4%)

Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A    + + A +   E +             L     +  +L+ A++   + +   P+  
Sbjct: 37  AQRMGRADYAIKCFTEALALQEDFETMGY--LAQVYIQSNELDEARKLLERMIRTEPEHT 94

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +     + ++++        +K  A E     A  L+ ++    + G M  ++  
Sbjct: 95  STLLTLANVCYMQEDYAA--MAEAAQKAIAVEEGNAMAHYLLGKADNGQNDGIMCIAHLT 152

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSE 305
             +++ L D+   A +  A++L    + ++A   ++ I   +P  E   +        + 
Sbjct: 153 --KAIVLKDDFTEARLLRAEALTKMQQYKEAMEDIDAILAQDPDDENAILLRGKIKEATG 210

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                    L + E+N  + ++ + + ++ +    + +A A    A+++ P 
Sbjct: 211 AEAEAEADYLHITELNPFNEQAFLYLGQLYIVQKKLTEAIALFDEAIELNPD 262


>gi|153006271|ref|YP_001380596.1| hypothetical protein Anae109_3428 [Anaeromyxobacter sp. Fw109-5]
 gi|152029844|gb|ABS27612.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 250

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 16/216 (7%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRI 167
               + +  +     L   +    ++ Y +A   L  +++   +    VY++        
Sbjct: 12  AARPEGSVDDTLKQSLALGRAYYLKKDYGLAETYLTQVVESNPS-FADVYNMLGVVYHDQ 70

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----- 222
           G    A R    AL I+P        +   Y    ++  A          +   +     
Sbjct: 71  GQYQKALRAFEAALRINPGYTDAALNLAVTYNDTGKYREAQETYRHALSRSGAAHGKLDR 130

Query: 223 ---RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                 A +    +      G    +  +   +L L           A +L     + +A
Sbjct: 131 YVQGKLANMYADIADVYLSAGLHEEAIAEYRRALALGPAFCDIRAKLAGALRDAGDREQA 190

Query: 280 EVILEKIWKVNPHPEIA------NIYTHLLSENTVG 309
               E++ + NP   +A       +Y     E+ V 
Sbjct: 191 IREYEEVVRQNPSYVLARLNLGLALYGGGRREDAVA 226


>gi|119383178|ref|YP_914234.1| TPR repeat-containing protein [Paracoccus denitrificans PD1222]
 gi|119372945|gb|ABL68538.1| Tetratricopeptide TPR_2 repeat protein [Paracoccus denitrificans
           PD1222]
          Length = 642

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 13/173 (7%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +A  + P    +      ++   +     LL  Q+     Q+++A  + E + ++   R 
Sbjct: 333 LATSDEPDPLALIHARLAEYLAPDLGEARLLSAQLLQGFGQFDLAEHEFEALRELGDMRP 392

Query: 155 FAVYSLYFESCRIGDLNSAQRY--ATKAL----DISPDAPWVTEAVVQQYVLAKEWSRAI 208
            A      E  RI  L  A+R   A KA        P+      A+        ++ +A+
Sbjct: 393 VA------ELSRIDALARAERLNDAEKAALALTAAHPELAQGWIALGDMLRQQDKFGQAV 446

Query: 209 TFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
              ++       +    R   L AR +     G    +  D   +LK+  +S 
Sbjct: 447 PAYDKALSLIGDKIPEARWFPLYARGIALERSGQFSKAEADFRAALKIRPDSA 499


>gi|122937279|ref|NP_001073910.1| tetratricopeptide repeat protein 36 [Homo sapiens]
 gi|189036953|sp|A6NLP5|TTC36_HUMAN RecName: Full=Tetratricopeptide repeat protein 36; Short=TPR repeat
           protein 36; AltName: Full=HSP70-binding protein 21
 gi|119587791|gb|EAW67387.1| hCG2037025 [Homo sapiens]
 gi|169655948|gb|ACA62794.1| HSP70 binding protein 21 [Homo sapiens]
 gi|223461661|gb|AAI46917.1| Tetratricopeptide repeat domain 36 [Homo sapiens]
 gi|223462045|gb|AAI46922.1| Tetratricopeptide repeat domain 36 [Homo sapiens]
          Length = 189

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 11/141 (7%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            Q+  ++   +  +   +   GDL++A     +A+ + P+         Q   L  + + 
Sbjct: 46  AQLEQSKALELQGVM--AAEAGDLSTALERFGQAICLLPERASAYNNRAQARRLQGDVAG 103

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI------ 260
           A+  L +  + +    R      + R L    +G    +  D   + +L           
Sbjct: 104 ALEDLERAVELSGGRGRAARQSFVQRGLLARLQGRDDDARRDFERAARLGSPFARRQLVL 163

Query: 261 --MASICAAKSLIS-QNKKRK 278
               +    + L     + R+
Sbjct: 164 LNPYAALCNRMLADMMGQLRR 184


>gi|296391488|ref|ZP_06880963.1| hypothetical protein PaerPAb_25179 [Pseudomonas aeruginosa PAb1]
          Length = 575

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 43/258 (16%)

Query: 109 YVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            +++      E L   LL  + A        A                     Y E    
Sbjct: 93  RIAEYLGADQEALDTSLLWARSAPDNLDAQRAAAIQLARAGRYEESMV-----YMEKVLN 147

Query: 168 GDLNS-----AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           G  ++     A   A    D         + ++++Y    +                   
Sbjct: 148 GQGDTHFDFLALSAAETDPDTRTGLLQSFDHLLKKYPNNGQ------------------- 188

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                LL  ++L     G    +    +E      + +   +  ++ L S  +  +A  +
Sbjct: 189 -----LLFGKALLLQQDGRPDEALTL-LEDNSASRHEVAPLLLRSRLLQSMKRSDEALPL 242

Query: 283 LEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L+   K   HP+     +A     +              L +   +  +    ++ + LE
Sbjct: 243 LKAGIKE--HPDDKRVRLAYARLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLE 300

Query: 338 MGSIDQAHAKAMLAMKIA 355
             + D+A       ++  
Sbjct: 301 AQAWDEARIYLEELVERD 318


>gi|115350946|ref|YP_772785.1| hypothetical protein Bamb_0892 [Burkholderia ambifaria AMMD]
 gi|115280934|gb|ABI86451.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD]
          Length = 636

 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L  A+     AL  +P                 + + A   + +      E   
Sbjct: 35  AHRAGRLAEAEHGYRAALGTNPADADALHLFGVLRHQQGQHAEAADLVGRAV----ELRP 90

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +         G +  +      +L L     +A      +  +  +   A    
Sbjct: 91  GDAALQLNLGNALKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAALQRHEDAVDAF 150

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++ P     H  + N    L   +    L    R  E+      +   ++     M
Sbjct: 151 GRALRLTPDDASIHNNLGNALNALGRHD--DALAAFHRALELRPGHAGAHNNLAMALNAM 208

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D A A    A+   PR
Sbjct: 209 GRADDAIAHFQAAIAAQPR 227


>gi|332162638|ref|YP_004299215.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325666868|gb|ADZ43512.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 249

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 63/192 (32%), Gaps = 12/192 (6%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
           +++  + + P      +    +     EYL           +     A + LE  +    
Sbjct: 15  VLAGCSGSSPEKVSQSAAGQTRLQLGLEYLT----------QGDLTAARQNLEKAVAADP 64

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
               A   + F   RIG+ ++A++   +A+ ++P    V            ++  A    
Sbjct: 65  QDYRAQLGMAFYEQRIGENDAAEQRYQQAMKLAPGNGTVLNNYGAFLCSLGQYVLAQQQF 124

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           +    +        ++         A++ D   +      +LK   +     +  A+   
Sbjct: 125 SAAVLSPDYGQVADSLENAGYCFLRANQND--QARVLLSRALKYDPDKGEPLLAEAQRHF 182

Query: 272 SQNKKRKAEVIL 283
            +  + +A+++L
Sbjct: 183 GEGNRAQAQLLL 194


>gi|307309007|ref|ZP_07588687.1| adenylate/guanylate cyclase [Sinorhizobium meliloti BL225C]
 gi|306900480|gb|EFN31094.1| adenylate/guanylate cyclase [Sinorhizobium meliloti BL225C]
          Length = 622

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
            ++A R+AT+A+ ++PD  +    +   Y+  K+   A    ++      E N N   LL
Sbjct: 439 PDTAVRFATQAVKMAPDDYYTHWTLASVYMELKDMVGARREYDRAY----ELNGNDPDLL 494

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSI 260
             R+   + +GD  ++  D   + +L  +  
Sbjct: 495 AERADMLSFQGDPASAITDIERAKRLNPSFP 525


>gi|269213966|ref|ZP_05983263.2| putative tetratricopeptide repeat-containing domain protein
           [Neisseria cinerea ATCC 14685]
 gi|269144841|gb|EEZ71259.1| putative tetratricopeptide repeat-containing domain protein
           [Neisseria cinerea ATCC 14685]
          Length = 501

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 9/88 (10%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCDN 258
           ++W +   F     + AK      A++ +A +L+  D+GD  A+   +  A+E+      
Sbjct: 95  RQWHKVRQF---AARYAKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNPR 151

Query: 259 SIMASICAAKSLISQNKKRKAEVILEKI 286
            +   + A +     N+ +++    EK+
Sbjct: 152 LL---LEAGRFYAEDNQNKESAAAFEKV 176


>gi|288942093|ref|YP_003444333.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
 gi|288897465|gb|ADC63301.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
          Length = 590

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 7/171 (4%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A    A ++  A       +   A  ++ L  +     +   + L+S +K+ +A  +LE 
Sbjct: 193 ADAHQALAMLAAGLSQPEVAERAARRAMTLRPDWSDPRLFLVRLLLSDDKRPEARALLES 252

Query: 286 IWKVNP-HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVESLVIVSKIALEMGSID 342
             + NP    +  +Y  LL +       R    R+     +  + L  V  ++L++  + 
Sbjct: 253 FVETNPGDRALKMLYGQLLVDEREFSTAREVFERMLREYPKDPDVLFAVGILSLQLEDLA 312

Query: 343 QAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            A        +   R+    F L    E+A   +    L W      A  D
Sbjct: 313 GARLHFGRLYETGQRQDEAAFYLGQTAERAE--DVATALDWYAKVSGANAD 361


>gi|162449887|ref|YP_001612254.1| TPR domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161160469|emb|CAN91774.1| TPR domain protein [Sorangium cellulosum 'So ce 56']
          Length = 1476

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 3/157 (1%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPW 189
           + +Y+ A +  E  +        A+ +L       GD   A+ +  KA   L +  D   
Sbjct: 203 DGRYDDAIKTYEAAIADRPGDPAAMMALAQLEADRGDKARARGHYEKALPLLKVPADVEQ 262

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
               ++   +   ++  A    +   KNA+     +A L    S                
Sbjct: 263 TRRTLLALCLDLSDFEAAKAQHDALVKNAQGSLFVKAELGRELSARGHHARAEAEFRELV 322

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
             +         A     +SL  Q K  +A  +L++ 
Sbjct: 323 KAAAGDNRALAPALRDLGQSLARQKKMDEALAVLKRA 359


>gi|86159496|ref|YP_466281.1| hypothetical protein Adeh_3075 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776007|gb|ABC82844.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 602

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 14/133 (10%)

Query: 129 IALAERQYNIAHEKL-EMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDI 183
                 + + A       M   P   E         LY E    G L+ A     +A+ +
Sbjct: 459 ALEQAGRRDEAEAAYLAAMRVDPGHAESCYNLGR--LYLE--SGGGLDDAIALFRRAIAL 514

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            PD P     +    V A+ ++ A   L++    AK      A   +  +      GD+ 
Sbjct: 515 RPDYPEAYANLGAALVRAQRYAEAAQVLDEA--GAKLGGSAEAAFNLGVARVML--GDVD 570

Query: 244 ASYHDAIESLKLC 256
            +    IE+L+  
Sbjct: 571 GARRQ-IEALRAA 582


>gi|86357755|ref|YP_469647.1| adenylate cyclase [Rhizobium etli CFN 42]
 gi|86281857|gb|ABC90920.1| probable adenylate cyclase (possibly two-component response
           regulator) protein [Rhizobium etli CFN 42]
          Length = 502

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 70/248 (28%), Gaps = 55/248 (22%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV------------ 127
               G   +   ++  A+ +   A +    +       +E    ++E             
Sbjct: 193 RRAAGRVRINAKMIDAASGDHLWAERFDRSLDNIFAVQDEVTAKIVEALLGRLRAPPPRN 252

Query: 128 ------------QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--------- 166
                       +          A E+  +ML     R   +   Y E+ R         
Sbjct: 253 RPKSLEAYDLCVRARKLMDDSPQAAEEAHLMLA----RAVDLDPDYAEAYRWLAMNHWMG 308

Query: 167 --------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
                     + + A + A KA+ I P+       +      A++++ A    + +   A
Sbjct: 309 WVHSGGPTESNRDVALQLARKAVAIDPNDAGCRWVLAYLLAYARDFAEA----DAQFAKA 364

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            E + N A    A S      G +      A ++ +L      AS       ++  + + 
Sbjct: 365 IELDPNEADTFAALSDITVLAGRIDEGLEHARKAFRLNP--FPASW----YYLALGQAQY 418

Query: 279 AEVILEKI 286
           A    E  
Sbjct: 419 AAEQYEAA 426


>gi|268563280|ref|XP_002646894.1| Hypothetical protein CBG19592 [Caenorhabditis briggsae]
          Length = 634

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 60/203 (29%), Gaps = 37/203 (18%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD   A + A K +   P   +  +  +   +   +W+ A+  + +   +      
Sbjct: 19  ADTSGDYQKALQAANKLIRKYPKETFAFKCKLVAQIQLSQWADALELIRKTPAHQMGHVG 78

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
                +  R  E  +    + +            + I A    A+    Q   + A  I 
Sbjct: 79  FEKAYIHYRQGELDEAVKELNTCEK---------DDIRAQELKAQIYYKQENFKDAYDI- 128

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE--------------EINKESVESLV 329
                         +Y      +   +L+RA  L               E  ++S   L 
Sbjct: 129 -------------YLYLLKNHSDDSDELRRANYLAVQARLEAQGTKQQVEDAEDSYSQLY 175

Query: 330 IVSKIALEMGSIDQAHAKAMLAM 352
             + + +E   + QA A    A+
Sbjct: 176 NKACVEIEAEKLPQALASLEKAL 198


>gi|107022106|ref|YP_620433.1| hypothetical protein Bcen_0549 [Burkholderia cenocepacia AU 1054]
 gi|116689051|ref|YP_834674.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424]
 gi|105892295|gb|ABF75460.1| TPR repeat protein [Burkholderia cenocepacia AU 1054]
 gi|116647140|gb|ABK07781.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424]
          Length = 635

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L  A+     AL  +P                 + + A   + +      +   
Sbjct: 35  AHRAGRLAEAEHGYRNALASNPADADALHLFGVLRHQQGQHAEAADLVGRAVALRPD--- 91

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +         G +  +      +L L     +A      +  +  +   A    
Sbjct: 92  -DAALQLNLGNALKALGRLDEAIDRFRNALTLAPEFPLAHYNLGNAYAALQRHDDAIDAF 150

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++ P     H  + N    L   +    L    R  E+      +   ++     M
Sbjct: 151 GRALRLTPDDASIHNNLGNALNALGRHD--DALAAFGRALELRPGHAGAHNNLAMALSAM 208

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D+A      A+   PR
Sbjct: 209 GRADEAITHFQAAIAAQPR 227


>gi|330830007|ref|YP_004392959.1| tetratricopeptide repeat family protein [Aeromonas veronii B565]
 gi|328805143|gb|AEB50342.1| Tetratricopeptide repeat family protein [Aeromonas veronii B565]
          Length = 388

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 76/225 (33%), Gaps = 13/225 (5%)

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131
           +   L +       + L    ++  A  +  A  + + +     F    L  LL   I  
Sbjct: 96  VTRQLTREQRQLALQELARDFLA--AGLLDRAEALWNELCDDSDFEETALAQLLI--IHQ 151

Query: 132 AERQYNIAHEKLEMMLQIPATREFA-VYSLYFE----SCRIGDLNSAQRYATKALDISPD 186
             R ++ A +    + +    +    +   Y E    + R G+         +AL I+P 
Sbjct: 152 QLRDWDKAIDVAVRLQKFQGKKLADPISHFYCEQAEIALREGNKGEGLAKLKRALSINPA 211

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
               +  + +  +   E+ +A   L +  +   ++       L+    +      +I   
Sbjct: 212 CARASLRLAELAMAEGEYEQASKELLRVFEQDIDFASEAMPKLLECYQQLGRTPALIPLL 271

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
             A+E        +  ++  AK +  ++   +A  ++ +  + +P
Sbjct: 272 EKAVEDHAG----VSVTLALAKLVEERDGLSQARSLVLRQLRRHP 312



 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 15/200 (7%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             + + A     + L++  +      ++   +    E  RAI   +Q     +     R 
Sbjct: 48  SDESDKAVDLFIQLLEVDSETIETHLSLGNLFRQRGEVDRAIKI-HQNLVTRQLTREQRQ 106

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L   + +    G +  +     E   LCD+S       A+ LI   + R  +  ++  
Sbjct: 107 LALQELARDFLAAGLLDRAEALWNE---LCDDSDFEETALAQLLIIHQQLRDWDKAIDVA 163

Query: 287 WK---------VNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
            +          +P  H         L   N    L +  R   IN     + + ++++A
Sbjct: 164 VRLQKFQGKKLADPISHFYCEQAEIALREGNKGEGLAKLKRALSINPACARASLRLAELA 223

Query: 336 LEMGSIDQAHAKAMLAMKIA 355
           +  G  +QA  + +   +  
Sbjct: 224 MAEGEYEQASKELLRVFEQD 243


>gi|323445817|gb|EGB02242.1| hypothetical protein AURANDRAFT_69063 [Aureococcus anophagefferens]
          Length = 328

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 48/158 (30%), Gaps = 4/158 (2%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
             L+   +  +         +  +   A Y+L     R G    A     +A+++ PD  
Sbjct: 38  ATLSTGDHAGSLAHFRAAAALDESSSTAHYNLGLALARGGAPAEAIAPLKRAVELEPDDA 97

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A+ + +        A+   ++      +       L   R+   AD G   A+   
Sbjct: 98  EFLGALGEAHAADGAHGDAVAAFDRALSLLPD----EPSLFYNRANSLADLGRTEAAVEG 153

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
              ++    +     +    +L    + R+A   L   
Sbjct: 154 YRAAIARGGDDAATRLHLGVALHRLERWREAAENLALA 191


>gi|300712028|ref|YP_003737842.1| GTP-binding protein [Halalkalicoccus jeotgali B3]
 gi|299125711|gb|ADJ16050.1| GTP-binding protein [Halalkalicoccus jeotgali B3]
          Length = 318

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 10/152 (6%)

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              +++    A    R ++     +S+       +  +  + + S    D         A
Sbjct: 13  EELIDKAFSRAARSGRAKSGAEAQQSMLQTASNILSDNLENVVTSWPDFDTVDPFYYELA 72

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVE 326
            +L+  ++ RK+    E  W      EI   Y   L ++  + +  R      +      
Sbjct: 73  DALVEVDELRKSLS--EIGWASRKTREIGQEYQGRLRTDADLARKHRKQAFARLAS---- 126

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
              ++ ++  ++  I +A  +     +I P +
Sbjct: 127 ---VLEEVEDDLLRIGEARDQLKTLPEIHPDE 155


>gi|159131140|gb|EDP56253.1| cell cycle control protein (Cwf4), putative [Aspergillus fumigatus
           A1163]
          Length = 676

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 90/275 (32%), Gaps = 32/275 (11%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  + ++P ++  A++  Y    +  GD              +Y  + L 
Sbjct: 257 KEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLEN 236
            +P    V     +    + +  R      +        +  + W R   + +     E 
Sbjct: 316 ENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEE 375

Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +  D+  +     E LKL            +  A+  I Q   + A   L +   + P 
Sbjct: 376 MEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPK 435

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKA 348
            ++   Y  L  E  + +  R   L E     N  + +S +  +++   +   ++A A  
Sbjct: 436 DKLFRGYIDL--ERQLFEFVRCRTLYEKQIEWNPANSQSWIKYAELERGLDDSERARAIF 493

Query: 349 MLAMK---IAPRKEIFLLLAQIEQANSHNTDKILY 380
            L +    +   + ++      E+      D++  
Sbjct: 494 ELGIDQPMLDMPELVWKAYIDFEEYE-GEYDRVRQ 527


>gi|152982631|ref|YP_001354312.1| hypothetical protein mma_2622 [Janthinobacterium sp. Marseille]
 gi|151282708|gb|ABR91118.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 839

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 50/121 (41%), Gaps = 10/121 (8%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAIL- 228
           A  +A +A+ ++P        ++   + A+  + A   +N+  +       + R RA++ 
Sbjct: 120 AVSHAQQAVRLAPANSAYWTLLINSQLAAQRLNDADQSVNEALQRFGPNSSFARQRAVVN 179

Query: 229 ------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                   A++ +   + D   + + A  ++       +  +   +SL+S N+  +AE  
Sbjct: 180 QGLAEQAGAQTYQALQEQDFTRAANAAQRAVSYAPERRVYRLLLVQSLLSANRLEEAEQA 239

Query: 283 L 283
           L
Sbjct: 240 L 240


>gi|94266026|ref|ZP_01289747.1| Secretin/TonB, short-like [delta proteobacterium MLMS-1]
 gi|93453421|gb|EAT03843.1| Secretin/TonB, short-like [delta proteobacterium MLMS-1]
          Length = 513

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 45/159 (28%), Gaps = 9/159 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESC-RIGDLNSAQRYATKALD 182
           E Q    +  ++ A  K E   Q      R      L   +  R+     A  YA  A  
Sbjct: 333 EAQALERQGDHHGALAKYERAFQRWPDNGRLA--EHLANLALVRLNLSAKAAHYARLAFS 390

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +                     ++A  + +    +A    R  A  L++ +    +    
Sbjct: 391 LDDGNDNAALLAAISLAQMARPAQAKEYFD----HAIAAPRPAAEALLSYAAFAEEHNSP 446

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +        +L   +  + +  A+      K ++A  
Sbjct: 447 RGALALLERHQELFGETPDSMMQRARLYDQLGKPQRATA 485


>gi|91782851|ref|YP_558057.1| signal peptide protein [Burkholderia xenovorans LB400]
 gi|91686805|gb|ABE30005.1| Putative signal peptide protein, TPR domain- containing
           [Burkholderia xenovorans LB400]
          Length = 1332

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 78/272 (28%), Gaps = 38/272 (13%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L   + R G    A  Y  K   + P                 ++  A+  L    KNAK
Sbjct: 518 LAVLAERAGHDEDALAYYRKLHQLDPGNTQYALGAASILYRQGDYKGALNALLAAGKNAK 577

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--------ICAAKSLI 271
           + +          +           +Y   + S       + A         I AA++  
Sbjct: 578 DSDVLFWRNAAQLARLLQRDDIANDAYKHLLASGAAAPEDLSAMTYFYDAYPIDAARTSE 637

Query: 272 SQNKKRKAEVILE---------------------------KIWKVNPHPEIANIYTHLLS 304
            Q ++ +++  LE                           K  + +P   +     +L  
Sbjct: 638 LQFRRDRSQRSLESAIHYYTDAEEYDRVEALLKTVTPDELKAAEGDPAFLLVRAEYYLQV 697

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL- 363
           +     L    R   +   + E    +    ++ GS  Q  A A+ A + AP +   L  
Sbjct: 698 DRPFDALHDLQRAVALPGATPELRAALLWTLVDYGSDAQLRA-AVAAWRDAPPQSAILWG 756

Query: 364 -LAQIEQANSHNTDKILYWTQSALHAMPDPLW 394
            LA  +   +     + Y          DPLW
Sbjct: 757 PLAAAQMRLNRPEAALQYLRLQTASMSRDPLW 788


>gi|121998569|ref|YP_001003356.1| hypothetical protein Hhal_1790 [Halorhodospira halophila SL1]
 gi|121589974|gb|ABM62554.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila
           SL1]
          Length = 241

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 4/144 (2%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           AE Q + A  +LE  LQI A    A+  +   +   GD  +A  Y  +A    PD+  + 
Sbjct: 35  AEGQPDQARSRLERALQIDAEHPQALTGMGLVAESQGDAQAAHGYHQRAAQADPDSGAIL 94

Query: 192 EAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
               +    A E   A+       + +  +      + L   +    D G   A+   A 
Sbjct: 95  NNWGRSLCRAGEEDDALAVFAEAAQVDGYDAAE---VPLTNAARCALDAGREDAAARRAD 151

Query: 251 ESLKLCDNSIMASICAAKSLISQN 274
            +++       A +   +    Q 
Sbjct: 152 AAVEAAPEFAPARVVRGELRYRQG 175


>gi|114319860|ref|YP_741543.1| FkbM family methyltransferase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226254|gb|ABI56053.1| methyltransferase FkbM family [Alkalilimnicola ehrlichii MLHE-1]
          Length = 921

 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 59/168 (35%), Gaps = 6/168 (3%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y+A+     ++ A +I  AR +     ++++     L   L  ++   E +   A     
Sbjct: 38  YRAIAQ---ALNAGDIHGARILCDKALERNSSDGCVLT--LHARLLWQEGRPEEALSASR 92

Query: 145 MMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             L           +++ +    +   + A  +  +A + +P+   +   + Q  V A  
Sbjct: 93  EALDQGGEGAADAAAIHAQFLLELNHTDDALGFLRRAAEKAPEHRRLQALLAQALVKANR 152

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             +A   L +  K   + +   ++  +   L + + G         +E
Sbjct: 153 REQARDILVELIKTQPDADTLNSLGHVLFDLGDGEAGFQQLQLAGVLE 200


>gi|302849129|ref|XP_002956095.1| hypothetical protein VOLCADRAFT_83495 [Volvox carteri f.
           nagariensis]
 gi|300258600|gb|EFJ42835.1| hypothetical protein VOLCADRAFT_83495 [Volvox carteri f.
           nagariensis]
          Length = 689

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 80/273 (29%), Gaps = 32/273 (11%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKE 220
            E+   G+ + A++    A+ +                    ++RA    +   ++  ++
Sbjct: 200 LEALT-GNPDRARKLYDAAVVVDSTHACAWHKWGMLEKSQGNYTRARDLWMQGIQRCRRK 258

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQNKKRK 278
                A L  A     A  G +  +     E  +  + +   ++    A     Q     
Sbjct: 259 PQSQNAYLYNALGCMAAQLGRVGEARAWFEEGTRTAEGAASVALWQAWAVLEAKQGDPTA 318

Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
              +  K    NP     H  +A         N    L    R  ++N          + 
Sbjct: 319 VRYLFRKALGANPRSRYVH--LAWALWEKKQGNPQQCLALLQRGTQLNPTDPALYQAWAL 376

Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389
           +  + G ID+A       +K  P      + + ++    +A   N D+     Q  + A 
Sbjct: 377 VEKQAGRIDRAQQLFEQGLKADPNYLYLWQAYGVM----EAEQGNLDRARQLFQEGVWA- 431

Query: 390 PDPLWISDDGYLSSVWLPLSPISKTLCYFEWKI 422
            DP   S   Y+   W             EW+ 
Sbjct: 432 -DPR-SSGTVYVFHAW----------GSLEWRA 452


>gi|237653693|ref|YP_002890007.1| tetratricopeptide repeat protein [Thauera sp. MZ1T]
 gi|237624940|gb|ACR01630.1| Tetratricopeptide TPR_2 repeat protein [Thauera sp. MZ1T]
          Length = 391

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 54/167 (32%), Gaps = 24/167 (14%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    ++++         R  A+  L  +  + G L+ A     +A  +      
Sbjct: 84  GETDRAIRIHQLLVDREDISDEHRLQALGELGQDFLKAGLLDRA-----EAAFLRLRGTR 138

Query: 190 VTEA----VVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIA 244
             +     +++ Y   K+W++AI        +    W+   A      +           
Sbjct: 139 ANDVALRYLLEIYQQEKDWAKAIEVAEALPGHEGVMWHTEVANFHCELAATALANSRHDE 198

Query: 245 SY---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           +      A E  + C   + AS+       +Q +  +A     + W+
Sbjct: 199 ARGHLDRAFEVNRRC---VRASLLLGDLHAAQGRDEEAL----EAWQ 238


>gi|213409421|ref|XP_002175481.1| cysteine string protein [Schizosaccharomyces japonicus yFS275]
 gi|212003528|gb|EEB09188.1| cysteine string protein [Schizosaccharomyces japonicus yFS275]
          Length = 470

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 17/156 (10%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             +  A+ F  +  +     N  +AI    R+   +  G+   +  DA  S +L      
Sbjct: 38  GSFQEAVEFYTKAIEQGPTAN--QAIYYSNRAAAYSQMGEYELALQDARRSDRLAPGVPK 95

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
            +   A++  S +   +A V LE     +  P ++         N + +L+R L  +   
Sbjct: 96  TAHRIAQAQESISIYNEALVYLE-----HNQPGLSL--------NALDRLERRLHPKARR 142

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             S E  ++ ++I L      QA    +  ++   R
Sbjct: 143 PVSWE--LLKARICLAQKDYGQAQKVVLSLLRENSR 176


>gi|308806267|ref|XP_003080445.1| putative crooked neck protein (ISS) [Ostreococcus tauri]
 gi|116058905|emb|CAL54612.1| putative crooked neck protein (ISS) [Ostreococcus tauri]
          Length = 404

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 16/172 (9%)

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHD 248
           ++    A + ++      +   N    N  R       L I  +L E  +  D   +   
Sbjct: 38  IRLEESAGDVAKTREVYERAIANVPPANEKRFWQRYIYLWINYALYEELEARDAERTREV 97

Query: 249 AIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
               LK+      +     I AAK  + + +   A  I      + P  +I   Y  +  
Sbjct: 98  YRACLKVIPHAEFSFSKIWIMAAKFELREKRLDAARKIFGLAIGLAPKEKIFATYIDI-- 155

Query: 305 ENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E  +G + R   L E +     ++  + +  + +   +G +++A A   LA+
Sbjct: 156 EFQLGNVDRCRTLHEKHLEIEPQNCSTWIKYADLERSLGEVERARAIFELAV 207


>gi|240013758|ref|ZP_04720671.1| putative periplasmic protein [Neisseria gonorrhoeae DGI18]
 gi|240016196|ref|ZP_04722736.1| putative periplasmic protein [Neisseria gonorrhoeae FA6140]
          Length = 612

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           LL  + AL + Q   A     +ML+   + E A  +L   +  +     A+    K   I
Sbjct: 70  LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128

Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234
            P        A W+   + +           +  L +    + +  + R  LL+ ++   
Sbjct: 129 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 182

Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263
                              E+  +  +  +           AIE+L    KL    +  +
Sbjct: 183 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 242

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314
           +   +        RK   IL+  ++      ++ ++  +           ++   +L   
Sbjct: 243 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 295

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368
             L E N  +     +  + A+   +  +  +      + A       ++    + A + 
Sbjct: 296 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 350

Query: 369 QANSHNTDKILYWTQSALHAM 389
            A+  +  K+  W +  + A 
Sbjct: 351 YADRRDYAKVRQWLKK-VSAP 370


>gi|219848851|ref|YP_002463284.1| transcriptional activator domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219543110|gb|ACL24848.1| transcriptional activator domain protein [Chloroflexus aggregans
           DSM 9485]
          Length = 1083

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 8/122 (6%)

Query: 87  ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLE 144
           AL   ++ +    +  A +M     Q      E L  L                A +   
Sbjct: 581 ALINAMLGVGPQALAFAHRMLIEAQQSGNLVTEALAELRLGHAYQLIARGDDQAALQHYS 640

Query: 145 MMLQ------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
             L+      +P TR      L       GDL  A+  A + L ++  A     A +   
Sbjct: 641 RGLRLLQQVTVPRTRAEGYLGLTLLHGHAGDLARAEADAREGLLLAASAGDEWVAALMLL 700

Query: 199 VL 200
            L
Sbjct: 701 AL 702


>gi|189025700|ref|YP_001933472.1| hypothetical protein TPASS_0468 [Treponema pallidum subsp. pallidum
           SS14]
 gi|189018275|gb|ACD70893.1| hypothetical protein TPASS_0468 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 650

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/239 (11%), Positives = 65/239 (27%), Gaps = 47/239 (19%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             ++         A    + +L+  +     +Y+L      +     A ++A +A+    
Sbjct: 406 RARVLAKSGAKEEAVRLFQEILERDSEDALTLYNLATVLLDLDRNEEALKHAQQAV---- 461

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
                                               N ++A  L A +L     G +  +
Sbjct: 462 ----------------------------------YANGSQARFLYAYALAAQKTGRVDLA 487

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIY- 299
                 +       + A     K  + +   ++AE  L+     +         +  +Y 
Sbjct: 488 LTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQNFEVNSNLGKLYV 547

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
                E  +   +RA        +  E+   V+++ +  G   +A       +    R 
Sbjct: 548 LRAQWETAIAHYRRA---ATAQPQDREAQCQVARVYVAAGQPHEALRAYRAVLAQDARA 603



 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 4/165 (2%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
              A    + ++A  + ++          A  +L       G L  A+ +   AL     
Sbjct: 475 ALAAQKTGRVDLALTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQ 534

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              V   + + YVL  +W  AI       + A              +      G    + 
Sbjct: 535 NFEVNSNLGKLYVLRAQWETAI----AHYRRAATAQPQDREAQCQVARVYVAAGQPHEAL 590

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 L     +    + A K  I  N+K  A+ +L ++   NP
Sbjct: 591 RAYRAVLAQDARAWDVYLEAGKLAIKVNEKEYAQEVLTQLLDRNP 635


>gi|126631487|gb|AAI33855.1| Ogt protein [Danio rerio]
          Length = 187

 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 11/149 (7%)

Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202
             P  R  +   L   + R    GD  +A+R+  +     PD   V   +  +       
Sbjct: 12  TEPTKRVLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
           + S   + L  K+      N   A           ++G +  +      +L+L  + I  
Sbjct: 72  DRSAHFSTLAIKQ------NPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            I  A +L++      A        + NP
Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYNP 154


>gi|302756977|ref|XP_002961912.1| hypothetical protein SELMODRAFT_60593 [Selaginella moellendorffii]
 gi|300170571|gb|EFJ37172.1| hypothetical protein SELMODRAFT_60593 [Selaginella moellendorffii]
          Length = 802

 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 91/227 (40%), Gaps = 30/227 (13%)

Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
           D+  A+      +  +P     W+  A +++  +A + + A +F+   +K  +E  +N  
Sbjct: 300 DIKKARLLLKSVIQTNPKHAPGWIAAARLEE--VAGKIAAARSFI---QKGCEECPKNED 354

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
           + L A  L + D    + +      ++K    S+   + AA+  +    K     +L K 
Sbjct: 355 VWLEACRLASGDAAKKVIAM-----AVKSIPTSVKLWMAAARLEVENAAK---SRVLRKG 406

Query: 287 WKVNPHPE---IANIYTHLLSENTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSID 342
            +    P+   +      L +E+    L  RA     +    VE  + ++++     + D
Sbjct: 407 LEFI--PDSVRLWKAVVELANEDEARILLARATECCRL---HVELWLALARL----ETYD 457

Query: 343 QAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388
           +A      A +  P +  I++  A++E+A   N  ++      A+ +
Sbjct: 458 KARVVLNRAREALPTEPTIWIAAAKLEEAQ-GNVSRVEGIIDRAIRS 503


>gi|253995616|ref|YP_003047680.1| hypothetical protein Mmol_0243 [Methylotenera mobilis JLW8]
 gi|253982295|gb|ACT47153.1| Tetratricopeptide domain protein [Methylotenera mobilis JLW8]
          Length = 512

 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 42/154 (27%), Gaps = 22/154 (14%)

Query: 96  AAHNIPL-ARKMHSYVSQQH--------TFHNEYLVYLLEVQIA------------LAER 134
           AA +  L A+ MH  +                E L  L + Q A             +  
Sbjct: 281 AAGDASLVAQTMHKPMKADEGAGHESAVAEPKEPLKLLTKAQTAGVDPTLLAAYEAFSRG 340

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194
               A +K   +LQ       A+  +   + R      A  +  K  DI P       A+
Sbjct: 341 DDVSAQQKYRQVLQKDVRNVDALLGMAAIAQRQARTMDAIGWYRKVTDIEPRNTIAQSAL 400

Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
                   +   A + +        E     A L
Sbjct: 401 ADLEANT-DAVGAESKIKSMLARQPEAANLHAAL 433


>gi|110669299|ref|YP_659110.1| TPR repeat-containing protein [Haloquadratum walsbyi DSM 16790]
 gi|109627046|emb|CAJ53522.1| tetratricopeptide repeat protein [Haloquadratum walsbyi DSM 16790]
          Length = 246

 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 5/126 (3%)

Query: 165 CRIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
            +I     A     +A   +P     A          +   +EW  AI    +   +  +
Sbjct: 73  MQINRFEEATETFERAARFAPEESLAAQEAWVNKGAAHGQLEEWDEAIGSYKEAL-HIDD 131

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            + + A      +    + G+  ++   A  ++K+      A       L  +    +A 
Sbjct: 132 ESEHAASAETNLAYALWEAGETESALQHAERAVKVDPRFPQAWYNRGFFLHERGLNEEAV 191

Query: 281 VILEKI 286
              +  
Sbjct: 192 SAFDNA 197


>gi|108759508|ref|YP_634864.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108463388|gb|ABF88573.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 389

 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 42/129 (32%), Gaps = 4/129 (3%)

Query: 94  SIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151
             A   + LA +  +      +       L  L +  + L+    + A    + + ++  
Sbjct: 181 HAACGQLGLAIQAATQALEKARGGLQRAVLEDLFK--LYLSAGSSDGAKRVAQELRKLDP 238

Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
           +    +Y L   +   G    A+    + L  +P +     A+ Q ++   E + A+  L
Sbjct: 239 SSITYLYLLGLATMSAGAFAEAKDVFAEVLRQAPGSWQAQHALAQMHLALGERAEAVKLL 298

Query: 212 NQKKKNAKE 220
                    
Sbjct: 299 EAAVATVPT 307


>gi|108761947|ref|YP_630742.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108465827|gb|ABF91012.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 526

 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 47/168 (27%), Gaps = 8/168 (4%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--AT 152
           +AA     A +  + +  +   +N  L  L       A      A +      +      
Sbjct: 135 LAAGKSAEAEQYLAGLEARGA-NNARLT-LARALALQARGDLPGARQAFARAAEASWRDP 192

Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-EAVVQQYVLAKEWSRAITFL 211
           R    Y         G    A     KA  ++PD         +      ++   A   L
Sbjct: 193 RFTTAYG--EALMDEGQYPQAVEAFAKATSVNPDHLLARVSTALAHTYQGRKMEEAQQVL 250

Query: 212 NQKKKNAKEWN-RNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
           +  +    E     +A     ++     +G    +   A E+LK   +
Sbjct: 251 SGVEARGAELTPGLKARAGALKAELALARGAPDEALSAADEALKAVPD 298


>gi|327306019|ref|XP_003237701.1| anaphase-promoting complex subunit Apc5 [Trichophyton rubrum CBS
           118892]
 gi|326460699|gb|EGD86152.1| anaphase-promoting complex subunit Apc5 [Trichophyton rubrum CBS
           118892]
          Length = 866

 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 9/109 (8%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV----VQQYVLAKEWSRAITF 210
             +  L        DL ++Q   T+    SP  P V+  +    +   +   ++  A++ 
Sbjct: 618 AGMPGLLT--NHRDDLRASQHLLTQLEGASPPDPEVSTTLNLLKIDLLMRQGDYDDALST 675

Query: 211 LNQKKK--NAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLC 256
           ++Q  +  +   ++    I LLIA++      G     +  A+ + K+ 
Sbjct: 676 VDQVAQSMHQDSFDIATQISLLIAKARIFDKTGQPERGFSLAMRAAKIA 724


>gi|313107329|ref|ZP_07793524.1| hypothetical protein PA39016_000920046 [Pseudomonas aeruginosa
           39016]
 gi|310880026|gb|EFQ38620.1| hypothetical protein PA39016_000920046 [Pseudomonas aeruginosa
           39016]
          Length = 575

 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 43/258 (16%)

Query: 109 YVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            +++      E L   LL  + A        A                     Y E    
Sbjct: 93  RIAEYLGADQEALDTSLLWARSAPDNLDAQRAAAIQLARAGRYEESMV-----YMEKVLN 147

Query: 168 GDLNS-----AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           G  ++     A   A    D         + ++++Y    +                   
Sbjct: 148 GQGDTHFDFLALSAAETDPDTRAGLLQSFDHLLKKYPNNGQ------------------- 188

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                LL  ++L     G    +    +E      + +   +  ++ L S  +  +A  +
Sbjct: 189 -----LLFGKALLLQQDGRPDEALTL-LEDNSASRHEVAPLLLRSRLLQSMKRSDEALPL 242

Query: 283 LEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L+   K   HP+     +A     +              L +   +  +    ++ + LE
Sbjct: 243 LKAGIKE--HPDDKRVRLAYARLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLE 300

Query: 338 MGSIDQAHAKAMLAMKIA 355
             + D+A       ++  
Sbjct: 301 AQAWDEARIYLEELVERD 318


>gi|304438234|ref|ZP_07398176.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304368841|gb|EFM22524.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 1077

 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA-- 156
           +   A K             E     L  +I L   +   A   L  + + P + E A  
Sbjct: 53  DAKGALKAWQECRA--LLPKEPYTVFLRARIHLLMGERRAALRVLTPLFEAPMSAEVAEK 110

Query: 157 VYSLYFE-SCRIGDLNSAQRYATKALDISPDAP 188
           VY+L  + +  +G    A  +  +A D +P+  
Sbjct: 111 VYNLAGQCARFLGAAEKAVEFYARARDAAPNLT 143


>gi|218885113|ref|YP_002434434.1| hypothetical protein DvMF_0004 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756067|gb|ACL06966.1| protein of unknown function DUF181 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 584

 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             Y  A    E +L +       + +L      +GD ++A      AL+I P   +    
Sbjct: 516 GDYAKAAANFESVLHLDKGSVIDLANLGLCHKFLGDADTAAHLLEAALEIDPSLDFARTH 575

Query: 194 VVQQYVLAK 202
           + +    A 
Sbjct: 576 LSELRAQAG 584


>gi|168703487|ref|ZP_02735764.1| probable serine/threonine protein kinase [Gemmata obscuriglobus UQM
           2246]
          Length = 1135

 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 43/130 (33%), Gaps = 7/130 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRI----GDLNSAQRYATKALD 182
             +   + + A    + ++ +    +   +   L   +            A  Y  KAL+
Sbjct: 635 ALVLGNKPDEAVRYFQAVVALRPRWQVGHHSLGLALGAPASSRGPERFEEAVAYFRKALE 694

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-RSLENADKGD 241
           + P++     ++      A     AI  +    +   +  + R+ L  + ++    ++  
Sbjct: 695 LEPNSAKTNHSLASALGSAGRHDEAIAQVEAALRFNYDVGKLRSTLAASLKAKGRIEECL 754

Query: 242 MIASYHDAIE 251
           +      A+E
Sbjct: 755 VQYKLALALE 764


>gi|170723289|ref|YP_001750977.1| CheR-type MCP methyltransferase [Pseudomonas putida W619]
 gi|169761292|gb|ACA74608.1| MCP methyltransferase, CheR-type [Pseudomonas putida W619]
          Length = 414

 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 2/104 (1%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L+ L+  Q      +   A    +  LQ    +    Y L   S   GD   AQ +  K
Sbjct: 313 ELLALIARQA--NAGEGAQARANCQRYLQQFEPKAQVYYWLGLLSDTEGDARQAQMHYRK 370

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           AL + P  P     +        + + A     +  +      R
Sbjct: 371 ALYLEPQHPEALLHLAMLLAAQGDEAGARRLHERAARAGMGAER 414


>gi|83859520|ref|ZP_00953041.1| hypothetical protein OA2633_13985 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852967|gb|EAP90820.1| hypothetical protein OA2633_13985 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 202

 Score = 37.2 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 46/149 (30%), Gaps = 8/149 (5%)

Query: 130 ALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           A        A    +++L+       TR   + +        G    A+    +A+++SP
Sbjct: 58  ARDTGATGRALGACDLLLRDASVTGETRARVLTNRAVMLLARGQNIQARSDLEEAVELSP 117

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           +       +    +       AI    Q ++         A+     ++     G    +
Sbjct: 118 ELAEAWLNLSAAQIATGSAQAAIDTARQARELGASP----ALAAFNTAIALETLGRFEDA 173

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQN 274
           Y    E+ +    ++  +   A+ +  Q 
Sbjct: 174 YAAYSEAAQQDPENVTLAAQPARFIWHQG 202


>gi|323143758|ref|ZP_08078426.1| hypothetical protein HMPREF9444_01058 [Succinatimonas hippei YIT
           12066]
 gi|322416471|gb|EFY07137.1| hypothetical protein HMPREF9444_01058 [Succinatimonas hippei YIT
           12066]
          Length = 278

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 3/122 (2%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GDL +A +   K  + +P         ++  +  K   +A   ++   +  KE    + +
Sbjct: 124 GDLGTALQKIAKVYNDNPKNSQAKFIYIRLCLKQKNLDKAKELIDSATREEKESKDYQDL 183

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L    +L  A K           E  K   + +      A +L    K+++A  +L + +
Sbjct: 184 L---SALNLALKAQESPELALLQEKYKEHPDDMEILKQLAAALSEAGKRQQALDLLFEAF 240

Query: 288 KV 289
           K 
Sbjct: 241 KK 242


>gi|300698097|ref|YP_003748758.1| hypothetical protein RCFBP_mp30305 [Ralstonia solanacearum
           CFBP2957]
 gi|299074821|emb|CBJ54388.1| conserved protein of unknown function, TPR repeat domain [Ralstonia
           solanacearum CFBP2957]
          Length = 531

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 14/197 (7%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             ++W  AI+   Q  ++     R +A     + +      D     + A+         
Sbjct: 128 RERDWIGAISAYYQDYESVPVATRLQAYADAMQRMTQRYPDDDEVWIYYALALQAAAP-- 185

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLK--RALR 316
                 + ++  +Q   RK+  ILEK++  NP HP  A+   H      +  L    A +
Sbjct: 186 -----VSDRTYANQ---RKSAAILEKLFAKNPQHPGAAHYLIHAYDYPPLAALGLVAAGK 237

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
              I   +  +  + S I   +G   ++    + A+++ P     L  A           
Sbjct: 238 YASIAPAAPHARHMPSHIYTMLGLWPESIQSNLAALEVQPDYYHALDFAVYAYLQLAQDT 297

Query: 377 KILYWTQSAL-HAMPDP 392
           +     +  + +A  +P
Sbjct: 298 RARTLIEQGVANATRNP 314


>gi|254510492|ref|ZP_05122559.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
 gi|221534203|gb|EEE37191.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
          Length = 714

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 95/300 (31%), Gaps = 47/300 (15%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           N   A +      ++    N   V L +  IA A  +   A   L  ++  P   + A  
Sbjct: 382 NQLEASRRILRAIERVLQINPPDVTLTKATIAEAAGETETAETLLTEVVAAPNAAKEAPL 441

Query: 159 SLYFESCRI---------GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
           +L     +           DL+ A  YA +              V+    L++++  AI 
Sbjct: 442 ALARLVEKRWADRGTVTPRDLDLAASYARELRKSELGPMMARTHVLAL-ALSQDFEEAIE 500

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI----ESLKLCDNSIMASIC 265
            L+   ++         +L +      A++ D I     AI    E+ K+   ++  ++ 
Sbjct: 501 HLDDVPEDGDWQRNRDQVLHL-----LAERADDITFLRYAIAPEGETRKIA--TVETAVA 553

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325
            A+ L        A              E+AN      S++    +KRA           
Sbjct: 554 MAERLADLGFSASAY-------------ELAN-----RSQDRGMSVKRAQLRARAALSED 595

Query: 326 ESLVIVSKIALEMGSIDQAHAKA--MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383
                + +IA   G   +A         +++   +    LL +I +  + +      W  
Sbjct: 596 RPRQALLEIA---GDQSEAAQDLRTQAMIQMQDFEAAARLLEEIGEVEAADH---YAWLA 649


>gi|218885587|ref|YP_002434908.1| peptidase M48 Ste24p [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756541|gb|ACL07440.1| peptidase M48 Ste24p [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 490

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 47/157 (29%), Gaps = 13/157 (8%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            LA  + +       F    L  L+  + A        A    E         +  +  L
Sbjct: 274 QLAASVRNRQDDDERFRRVQL--LVRARYA----DATTALRTFEQAKPTDCMSQLGLAIL 327

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
           Y    RIG+  +A     +AL  +P    V     + +    + +RA   L +       
Sbjct: 328 YSRLNRIGEATTA---FDRALACNPKDQLVWREAGRFHYTKGDRNRAAQMLQRAV----L 380

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            N    + L   +    D G    +Y    E L+   
Sbjct: 381 MNSRDYMALFFYARLLFDAGQRNEAYTYYKEVLRHLP 417


>gi|218189848|gb|EEC72275.1| hypothetical protein OsI_05436 [Oryza sativa Indica Group]
          Length = 458

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 61/232 (26%), Gaps = 42/232 (18%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEM-MLQIPATREF-----AVYSLYFESCRIGDLNSAQR 175
             LL  +       +++A    +  +   P   E       + +L  ++    D  +  +
Sbjct: 183 ALLLRGRAYYYLADHDVASRHYQKGLRLDPEHSELKKAYFGLKNLLKKTKSAEDNAAKGK 242

Query: 176 Y---ATK---ALDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNR 225
               A     AL + PD       +                AI+   +      +     
Sbjct: 243 LRVSAEDYKAALAMDPDHTSYNVHLYLGLCKVLVKLGRGKEAISSCTEAL--NIDGELVD 300

Query: 226 AILLIARSLENADKGDMI-----ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           A+     +    +  +        +   A + LKL        I       S    ++A 
Sbjct: 301 ALTQRGEAKLLTEDWEGADMGIREALMRAEKQLKLSKRKDWYKILGISKTASAADIKRAY 360

Query: 281 VILEKIWKVNPHPE---------------IANIYTHLLSENTVGKLKRALRL 317
             L   W    HP+               IA  Y  L  E+   +  R   L
Sbjct: 361 KKLALQW----HPDKNVDNREEAENMFREIAAAYEVLGDEDKRVRYDRGEDL 408


>gi|154252995|ref|YP_001413819.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
 gi|154156945|gb|ABS64162.1| Tetratricopeptide TPR_2 repeat protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 547

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 60/208 (28%), Gaps = 16/208 (7%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
            +     AL   L+++   +  +     +  S      +     LL +       ++  A
Sbjct: 51  RHVNALNALCRSLIAVGRPDEAVHALDAAAASAPEDKQH-----LLALAGICFAYKHVRA 105

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
            E    +L I      A+ +L            A    + AL+I PD       + +   
Sbjct: 106 EELYRRVLTIDPDAFVALGNLASIIVEKAGYQEAVDLISHALEIRPDTAECYNTLGRALA 165

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A  +  A     +      E      +     +L +   G    +      +L +  + 
Sbjct: 166 GAAMYDEAEASYRRAIAINPELP---TVYANYGALLDV-VGRQQEALQLLQIALNMNPDC 221

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIW 287
                  A++L++          +E  W
Sbjct: 222 DGTRWNLARALLATGH-------IEAGW 242


>gi|146313235|ref|YP_001178309.1| lipoprotein NlpI [Enterobacter sp. 638]
 gi|145320111|gb|ABP62258.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638]
          Length = 294

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|241762779|ref|ZP_04760843.1| metallophosphoesterase [Acidovorax delafieldii 2AN]
 gi|241368198|gb|EER62390.1| metallophosphoesterase [Acidovorax delafieldii 2AN]
          Length = 1117

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 12/173 (6%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG----DLNSAQRYA 177
             L   Q      +Y  A   L        T+      L   +        D       A
Sbjct: 827 ARLQHAQALRMIDEYARAAALLRRCELTVKTKAMKQQVLLNLAMLSDTVGDDPAETLDLA 886

Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE-N 236
            +   + P   W  +A     +   +  +A      +    +   R   +L    +++  
Sbjct: 887 RRCERVDPKTTWGLQAK-GIVIANDDAFKADRDNQLRLLQEEARKRKSYVLSNNLAIQRA 945

Query: 237 ADKGDMIASYHDAIESLKLCDN------SIMASICAAKSLISQNKKRKAEVIL 283
           AD  D         E+ +   +       + ASI  AK+ + ++    AE +L
Sbjct: 946 ADTKDPERKKVLLQEAARTARDENDAYNLVRASISLAKAGLKESGVLTAEQML 998


>gi|253701264|ref|YP_003022453.1| hypothetical protein GM21_2659 [Geobacter sp. M21]
 gi|251776114|gb|ACT18695.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 389

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------ 295
            I  Y D + +              ++          A ++ EK      HP++      
Sbjct: 11  EIQRYEDMLAADAKSLCFAP----LSELYRKLGLLDDAIMVAEKGCAA--HPDLPAGFLA 64

Query: 296 --ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
                Y   L+      L+RA     +    +E+L ++ ++ +E   +  A       ++
Sbjct: 65  LGTACYAKGLTGQARSALERA---VALQPNHLEALKLLGQLYVEQNEVGLARKVLEQVLQ 121

Query: 354 IAPR--KEIFLL 363
             P   +   LL
Sbjct: 122 QDPDDLESSLLL 133


>gi|17545631|ref|NP_519033.1| hypothetical protein RSc0912 [Ralstonia solanacearum GMI1000]
 gi|17427924|emb|CAD14614.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 425

 Score = 37.2 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 24/270 (8%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + ++  P      R+ A+Y L  +  R G L+ A+  + + L     A  
Sbjct: 84  GETERAIRVHQNLVNRPDLPANERDHALYELGQDFLRAGLLDRAEE-SLRMLMEGVFAEP 142

Query: 190 VTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +++ Y + KEW +AI      +    ++++   A      + E+  + D+ A+   
Sbjct: 143 AKRVLLELYEVEKEWRKAIDAARELQTLQGQDYSVQIAQFCCELAQESLQRKDVSAAVEW 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305
              +L+    ++ A+I      + +     A      I + NP       +  L++E   
Sbjct: 203 LERALQENPKNVRATIQLGDVALGKGDTEGAIKRWRSIEQQNP------AFLPLVAERLM 256

Query: 306 NTVGKLKR-ALRLEEINKE-----SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
               +L R A  L  +  +       E L +V +  L++  ID A A     ++  P   
Sbjct: 257 KAYAQLGRAAEGLAWLRSKMDARLGPELLDVVYRYELDVHGIDDAVALMREQIRRQPSLM 316

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM 389
               L + E A   +         +A+ A 
Sbjct: 317 ALTRLVEAE-ATRASEAVSHE--AAAVAAP 343


>gi|237654049|ref|YP_002890363.1| type IV pilus biogenesis/stability protein PilW [Thauera sp. MZ1T]
 gi|237625296|gb|ACR01986.1| type IV pilus biogenesis/stability protein PilW [Thauera sp. MZ1T]
          Length = 266

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 4/149 (2%)

Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           Y L   +   + +  +A+    +AL  +P  P    +         +    + +L     
Sbjct: 86  YHLLGLAYMSVEEHAAARENFERALREAPGDPDFNNSYGWFLCSQGQERAGLEYL--ALA 143

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
               + R++   L    L +   G+  A+      +++    +  A    A       + 
Sbjct: 144 ARNPYYRHQTRPLTNAGLCHLRLGEEAAAEAQFQRAVQADPENAQALYLLADIAYRGGRY 203

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE 305
            +A   L ++ + +  P  A+ +  L +E
Sbjct: 204 EQARSELIRLHQAH-GPSAASAWLGLRTE 231



 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 60/185 (32%), Gaps = 10/185 (5%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
             +  A+        ++  +     +L +A  +   +      ++  A+       +   
Sbjct: 63  GRYDVALDEAKIALADSPSYAPAYHLLGLAY-MSVEEHAAARENFERALREAPGDPDF-- 119

Query: 262 ASICAAKSLISQNKKRKAEVILEKI-----WKVNPHPEIANIYTHLLSENTVGKLKRALR 316
            +      L SQ ++R     L        ++    P       HL          +  R
Sbjct: 120 -NNSYGWFLCSQGQERAGLEYLALAARNPYYRHQTRPLTNAGLCHLRLGEEAAAEAQFQR 178

Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNT 375
             + + E+ ++L +++ IA   G  +QA ++ +   +   P      L  + E+   +  
Sbjct: 179 AVQADPENAQALYLLADIAYRGGRYEQARSELIRLHQAHGPSAASAWLGLRTERRLGNAD 238

Query: 376 DKILY 380
            +  Y
Sbjct: 239 AEASY 243


>gi|254515799|ref|ZP_05127859.1| TPR repeat protein [gamma proteobacterium NOR5-3]
 gi|219675521|gb|EED31887.1| TPR repeat protein [gamma proteobacterium NOR5-3]
          Length = 610

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 4/113 (3%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + + GDL +A  Y    L  SP AP +  +  Q      ++  A     + +    +   
Sbjct: 151 AQKRGDLEAALAYCRTGLKGSPKAPRLHYSQAQLLRQDCDFGGAADAYGKARHCGFDSPD 210

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276
               L    +    D GD+ A+Y  A +         +    AA    S  + 
Sbjct: 211 ----LYRNWAAALLDAGDIGAAYQVAKQGAGRFPGHALLQRSAAHLHFSSGEP 259


>gi|190893426|ref|YP_001979968.1| adenylate cyclase [Rhizobium etli CIAT 652]
 gi|190698705|gb|ACE92790.1| adenylate cyclase protein [Rhizobium etli CIAT 652]
          Length = 622

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 19/198 (9%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           ++PL R +           +    +             + A    E  L +      A +
Sbjct: 386 DVPLRRILEMSARALALDPDLPEAHASHGLALHQSGYDDRAAAAFERALTLDPNLFEANF 445

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKEWSR-----A 207
                    G+      Y T+A +I PD              + ++V  + W+R     A
Sbjct: 446 HYARFFFMHGNFAECVHYFTRAAEIRPDDYVSPIHLMAAYHSLGRWVDRENWARLGLLRA 505

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
              LN   +N+   +R         +L  A  GD   +   A  ++ +  + I+A    A
Sbjct: 506 ERALNLNPENSGPAHR--------GALALAHLGDAARARDWAARAIAIDPDDIVAQYNLA 557

Query: 268 KSLISQNKKRKAEVILEK 285
                     +A  +LEK
Sbjct: 558 CVYSVLGDLDQAIDLLEK 575


>gi|159485952|ref|XP_001701008.1| histone methyltransferase [Chlamydomonas reinhardtii]
 gi|158281507|gb|EDP07262.1| histone methyltransferase [Chlamydomonas reinhardtii]
          Length = 953

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 20/135 (14%)

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
           +  A+LL   +      G   ++   A  +L+    +  A +  AK+L    +  +A   
Sbjct: 311 KRTAVLLNNSAAACLGFGAHESARAYAQLALRGDPGNPKALMRLAKALDGLGRYSEAA-- 368

Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
             + W+ +    +A   ++    +     +R   L+ + +        V++   E G  +
Sbjct: 369 --EAWESH----LAAA-SYPQGSSAAAAGRRF--LQSLRQR-------VAEA--ERGEYN 410

Query: 343 QAHAKAMLAMKIAPR 357
           +A      A    PR
Sbjct: 411 EAGMAREAAASTTPR 425


>gi|24582217|ref|NP_609026.1| CG9523 [Drosophila melanogaster]
 gi|74933822|sp|Q8SWV6|FICD_DROME RecName: Full=Adenosine monophosphate-protein transferase FICD
           homolog
 gi|20152055|gb|AAM11387.1| LD47713p [Drosophila melanogaster]
 gi|22945765|gb|AAF52381.2| CG9523 [Drosophila melanogaster]
 gi|220956116|gb|ACL90601.1| CG9523-PA [synthetic construct]
          Length = 492

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY-SLYFES 164
            SY   + T   E L  L   Q      + + A    E  +   P   E  +    + E 
Sbjct: 105 ASYTEAEQTNIKEALGALRMAQDLYLAGKDDKAARLFEHALALAPRHPEVLLRYGEFLEH 164

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +   + + Q Y   AL ISP                +  +  +  L++++  + +  R 
Sbjct: 165 NQRNIVLADQYYFQ-ALTISPSNSEA-------LANRQRTADVVQSLDERRLESLDSKR- 215

Query: 225 RAILLIARSLENADKGDMIA 244
            A+  I  S     +    A
Sbjct: 216 DALSAIHESNGALRRAKKEA 235


>gi|326925416|ref|XP_003208911.1| PREDICTED: tetratricopeptide repeat protein 4-like [Meleagris
           gallopavo]
          Length = 310

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%)

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           RA+LL  R+  +   G+  ++  DA ++ KL  + + A +  A   +      +A
Sbjct: 40  RAVLLSNRAAAHCRLGNYRSALADATQARKLKPDHLKAIVRGALCHMELRNYSEA 94


>gi|195577016|ref|XP_002078369.1| GD23409 [Drosophila simulans]
 gi|257096367|sp|B4Q4M7|FICD_DROSI RecName: Full=Adenosine monophosphate-protein transferase FICD
           homolog
 gi|194190378|gb|EDX03954.1| GD23409 [Drosophila simulans]
          Length = 492

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY-SLYFES 164
            SY   + T   E L  L   Q      + + A    E  +   P   E  +    + E 
Sbjct: 105 ASYTEAEQTNIKEALGALRMAQDLYLAGKDDKAARLFEHALALAPRHPEVLLRYGEFLEH 164

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +   + + Q Y   AL ISP                +  +  +  L++++  + +  R 
Sbjct: 165 NQRNIVLADQYYFQ-ALTISPSNSEA-------LANRQRTADVVQSLDERRLESLDSKR- 215

Query: 225 RAILLIARSLENADKGDMIA 244
            A+  I  S     +    A
Sbjct: 216 DALSAIHESNGALRRAKKEA 235


>gi|195343016|ref|XP_002038094.1| GM18629 [Drosophila sechellia]
 gi|257096366|sp|B4I1V5|FICD_DROSE RecName: Full=Adenosine monophosphate-protein transferase FICD
           homolog
 gi|194132944|gb|EDW54512.1| GM18629 [Drosophila sechellia]
          Length = 492

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY-SLYFES 164
            SY   + T   E L  L   Q      + + A    E  +   P   E  +    + E 
Sbjct: 105 ASYTEAEQTNIKEALGALRMAQDLYLAGKDDKAARLFEHALALAPRHPEVLLRYGEFLEH 164

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            +   + + Q Y   AL ISP                +  +  +  L++++  + +  R 
Sbjct: 165 NQRNIVLADQYYFQ-ALTISPSNSEA-------LANRQRTADVVQSLDERRLESLDSKR- 215

Query: 225 RAILLIARSLENADKGDMIA 244
            A+  I  S     +    A
Sbjct: 216 DALSAIHESNGALRRAKKEA 235


>gi|168699302|ref|ZP_02731579.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
          Length = 728

 Score = 37.2 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 54/159 (33%), Gaps = 6/159 (3%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              + A E      +   T     Y+L       G+L  A     +A+ + P        
Sbjct: 486 GDVDGAVEAYRQASRFAPTDATVRYNLGIALHAKGELTPAAESYREAIKLDPGYAKAHS- 544

Query: 194 VVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                ++  +   A   L   ++  A + +  RA   +  +L +  +G++ A+     ++
Sbjct: 545 --NLGLVLHDLGSAEQELAAHRQAIACDPSFGRAHYNLGNALAH--QGELDAAIAAYRDA 600

Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           L+L  +   A      +L        A   + +  + +P
Sbjct: 601 LRLDPDYAPAHHNLGIALQKSGDSGGAVEAIREAVRRDP 639


>gi|302803959|ref|XP_002983732.1| hypothetical protein SELMODRAFT_118626 [Selaginella moellendorffii]
 gi|300148569|gb|EFJ15228.1| hypothetical protein SELMODRAFT_118626 [Selaginella moellendorffii]
          Length = 257

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 46/166 (27%), Gaps = 20/166 (12%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF-ESCRIGDLNSAQRYATKALD 182
           L+  Q          A      M         A +++    + R GD     + A +  D
Sbjct: 60  LVSAQA--QNGFLEEARRTFSRMPSKD----VASWNIMITAAARDGD----LKLAKQMFD 109

Query: 183 --ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
              +P+      A++  YV   +   A     +   + +       +++         + 
Sbjct: 110 GLQAPNQV-SWNAMISAYVKNGDLKDARELFERMPSSQRNAITWTTMVMAYARAGYMQQA 168

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
                +       ++   +++++              KA  +L   
Sbjct: 169 HAKELFDKMPRRDRVSWRAMVSA------YAESGYPSKALRLLSTT 208


>gi|291539579|emb|CBL12690.1| hypothetical protein RO1_21780 [Roseburia intestinalis XB6B4]
          Length = 384

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 6/134 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
             L   Q+  AE     A +  +  +        A+ +L       G+  +A     + L
Sbjct: 198 ANLYLAQVYEAEEDSANAEKYYQAYVDSGTADSVAMNALAEIQMEKGNYEAALEDIRQGL 257

Query: 182 DISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            +  D     + ++   ++A     ++S A   + Q      +    +   +  ++ +N 
Sbjct: 258 AM--DNVTNQQELLSNQIIAYEYSGDFSSAWDVVQQYVSLYPDDEAAQREYIFLKNRQNT 315

Query: 238 DKGDMIASYHDAIE 251
           D G    S   + E
Sbjct: 316 DAGSDAESTDSSDE 329


>gi|227818816|ref|YP_002822787.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|227337815|gb|ACP22034.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 587

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 27/234 (11%)

Query: 169 DLNSAQRYATKALDISPD----APW----VTEAVVQQYVLAKE--WSRAITFLNQKKK-N 217
           D   AQ    +A+ + P       W    + +A V  +   K+  W+  +  L Q    +
Sbjct: 349 DNKQAQALIDRAIALDPAYAHAHAWRACILGQAWVYGWCEDKDAVWAEIVAELEQALALD 408

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             + + +R +     +  + +  ++  + +    +L L  N  +  +   + L    +  
Sbjct: 409 DNDADVHRIL-----AAVSVNNNELTTARYHQERALSLNPNYDLVVVQQGELLTWLGRPE 463

Query: 278 KAEVILEKIWKVNPH-PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +    + K  ++NPH PE     +   +           ++  + L  +  + V+   + 
Sbjct: 464 EGVEWIRKAMRLNPHHPERFWSHLGKAHFAARQY--AEAIEAFMHLSTM--DHVQQAFVA 519

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385
           +     +G    A A       +AP   I   LA +  A    T  I      A
Sbjct: 520 ACYGW-LGDEIAASAHIKKLRALAPDFGIESFLATLHYAQESETQHIREGLVKA 572


>gi|126734786|ref|ZP_01750532.1| integral membrane protein-like [Roseobacter sp. CCS2]
 gi|126715341|gb|EBA12206.1| integral membrane protein-like [Roseobacter sp. CCS2]
          Length = 675

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 1/100 (1%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-QYNIAHEKLEMMLQ 148
            G +         A++   +             +L     A      Y  A    +  ++
Sbjct: 546 RGALFAFQGKGEEAKRDCEHALHLAPLDPHRFFFLSLASTASIAAEDYERAIALAKASIR 605

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
           +  T    +        R+GD  +A+R   + L + P+  
Sbjct: 606 LNRTHTSTLRVKAVAQMRLGDEEAARRTIQELLRLQPNLS 645


>gi|159898519|ref|YP_001544766.1| ATP-dependent transcription regulator LuxR [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891558|gb|ABX04638.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1019

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 62/178 (34%), Gaps = 33/178 (18%)

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIE 251
           + +      E ++A+  + Q    A+     R +L     ++     +GD+ A+   A E
Sbjct: 749 LARIQQAHGEPAQALATMAQAVALAQTLPSPRGLLWATTWQARLQLAQGDLAAATRWAQE 808

Query: 252 SLKLCDNSIMASI------CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
             +L +     +I        A+ LI+Q + ++A  +LE         ++   Y      
Sbjct: 809 YQRLANPFPQFNIYDAEDLTLARILIAQGQHQQASALLE---------QLLPAY------ 853

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
              G+L             +E  ++ +           A    + A+++A  +    L
Sbjct: 854 QAAGRL----------PSVIEVYLLQALNLAAQQDWSVAGRVLIQALRLAEPENYLRL 901


>gi|70730608|ref|YP_260349.1| TPR domain-containing protein [Pseudomonas fluorescens Pf-5]
 gi|68344907|gb|AAY92513.1| TPR domain protein [Pseudomonas fluorescens Pf-5]
          Length = 351

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 11/141 (7%)

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
             +       D+I +     ++L+L  +++ A +   + L  Q +   A  +L K  +  
Sbjct: 180 QLARLYLHNADLIKAQQTLEQALRLAPDNLQAVVLQIEVLDKQGQSDAARQLLAKQLQAQ 239

Query: 291 ------PHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
                  H  +      H   E  +  L RA+ LE     +      ++        ++ 
Sbjct: 240 QDSAYLQH-ALGLWLLHHGQGEFALLGLSRAVELE---PNNAAYRYDLATTLHSEQELEA 295

Query: 344 AHAKAMLAMKIAPRKEIFLLL 364
           A  +    ++  P      +L
Sbjct: 296 AQKQLEEIVQRQPYNRKARVL 316



 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 12/151 (7%)

Query: 149 IPATREFAVYS--------LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
              T+              L        DL  AQ+   +AL ++PD        ++    
Sbjct: 162 DEYTQVLKTRGDNVEAQYQLARLYLHNADLIKAQQTLEQALRLAPDNLQAVVLQIEVLDK 221

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
             +   A   L ++ +  ++     A L  A  L     G    +      +++L  N+ 
Sbjct: 222 QGQSDAARQLLAKQLQAQQDS----AYLQHALGLWLLHHGQGEFALLGLSRAVELEPNNA 277

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291
                 A +L S+ +   A+  LE+I +  P
Sbjct: 278 AYRYDLATTLHSEQELEAAQKQLEEIVQRQP 308


>gi|331019323|gb|EGH99379.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 772

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 58/239 (24%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQ---QYVLAKE---WSRAITFLNQKKKNA 218
              G+    +  A  A+  +P  P   + ++Q     + A +    +  +  +  +  + 
Sbjct: 94  IDAGEPARGREMARAAIAQAP-LP-SADLMLQYAGLLLAAGDDVQVNAILRNVQGQPMSV 151

Query: 219 KEWNRNRAILLIAR---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +   R   +L   R   +    + GD+  +Y     +L    + I A    A+   +   
Sbjct: 152 QTRKRFDDLLYRYRIRQADLLREGGDLAGAYDTLAPALAQRPDDIQAVSAFARMYTANGD 211

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335
             +A  +                                  L +      + L+  +  A
Sbjct: 212 SARAFEL-------------------------------YKPLLQRQPNDPQVLLGAADAA 240

Query: 336 LEMGSIDQAHAKA---MLAMKIAPR-----KEIFLLLAQIEQANSHNTDKILYWTQSAL 386
           ++      A           +  P+       I+  +          T       + A+
Sbjct: 241 VKAHDYGFAEKALSQFRKLERNDPQTLTEAARIYQSM--------GQTGAATELLRKAV 291


>gi|300120392|emb|CBK19946.2| unnamed protein product [Blastocystis hominis]
          Length = 429

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 12/129 (9%)

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL--IS 272
             +A + +R+  +  IA +       D   + +    +L    +   AS+    +     
Sbjct: 157 MIHALDRDRSCLLSSIAAAFYFIQSRDYAKAINAYQMALLYHPD-APASVRVGIAYCFYK 215

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---------LKRALRLEEINKE 323
           QN  +KA + L++  +++P  E A      L                L+   +L  +N  
Sbjct: 216 QNNYKKAFLALDRALQLDPANEEALAMKAALQRTAADLSPKERVIASLQTIQQLYRVNPN 275

Query: 324 SVESLVIVS 332
             ++L  ++
Sbjct: 276 HPQALNYIA 284


>gi|299137425|ref|ZP_07030607.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298600830|gb|EFI56986.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 770

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 20/172 (11%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATR--------EFAVYSLYFESCRIGDLNSAQRYATK 179
           + A A+        +++     P                    ++ R+         A  
Sbjct: 504 RAAFAQADEAGMQRQIQWARGNPEESDALDDAAWVAMYRGQMIDARRLFTAAKQNALANN 563

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           +++          A+V++  L  ++  ++   ++  ++A       A      +L  A  
Sbjct: 564 SVES------AASALVEEANLEADF-GSLPAAHKDAQDALALPFASAFEQAYAALPLASS 616

Query: 240 GDMIASYHDAIESLKLCD-----NSIMASICAAKSLISQNKKRKAEVILEKI 286
           GD+  +   A ++  +       NS M +   A   + Q+  R+A   LE+ 
Sbjct: 617 GDISNAQALAKKAASMAPLDTMVNSAMLASVRAAIHLQQHDPRQAIQSLEET 668


>gi|195387345|ref|XP_002052356.1| GJ22149 [Drosophila virilis]
 gi|194148813|gb|EDW64511.1| GJ22149 [Drosophila virilis]
          Length = 597

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 13/192 (6%)

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
            +    N       RA   I R+       +      D  E+ KL  ++       A+ L
Sbjct: 327 FDAILANDDADTTLRAYAFIKRAALFIQTEEREKGLADFAEAEKLKPDNPDVYHQRAQIL 386

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANI---YTH----LLSENTVGKLKR----ALRLEE 319
           +   +   A +  +K  ++ P   IAN+   Y      L+S +   +L+R      +  E
Sbjct: 387 LLLEQIEAALLEFDKAVRLAPQHAIANVQKCYAEYRLSLMSGD-QKRLERVIQDFEKAIE 445

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN-SHNTDKI 378
              + VE   +++++  +     QA     +AMK AP     L+   I       + +  
Sbjct: 446 KFPDCVECYSLMAQVLADQQQFPQAQQFYEMAMKRAPTNPALLVHQAIMMLQWRGDIEAA 505

Query: 379 LYWTQSALHAMP 390
           +     A+   P
Sbjct: 506 VTLLNRAIDVDP 517


>gi|172061658|ref|YP_001809310.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
 gi|171994175|gb|ACB65094.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MC40-6]
          Length = 545

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 70/237 (29%), Gaps = 49/237 (20%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A   A +A+ + P A           +L +  + A+            W   R  L 
Sbjct: 65  TADALALAERAVRVHPGADARFNHGYVLQMLGRH-AEAVAPYRAAYALDPRWPSLRNNLA 123

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           IA  L   D+ + IA    A+E+  L                             + W  
Sbjct: 124 IALRLSGGDRNEEIALLDAAVEADPLD---------------------------VQAW-- 154

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                I  +   L +++  G L  A RL +I  ++  +L  ++    E    D A   A 
Sbjct: 155 -----INLVVARLAAQDLDGALACAARLAQIAPDNALALNNIAMAMKEAQRWDDAERYAA 209

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH------------AMPDPLW 394
            A ++AP    F     I Q    N      W                  A+P P W
Sbjct: 210 RACQLAPDDASFRFNLAIIQLVRGNYAA--GWRGHEARWDGAGELRGRRPALPGPRW 264


>gi|87198234|ref|YP_495491.1| tetratricopeptide TPR_4 [Novosphingobium aromaticivorans DSM 12444]
 gi|87133915|gb|ABD24657.1| Tetratricopeptide TPR_4 [Novosphingobium aromaticivorans DSM 12444]
          Length = 311

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEW 221
            GD + A    ++A+   P    V    +        +   +   A+ + ++        
Sbjct: 115 AGDFDGALEAFSQAVTGIPREQEVAGVPLMAMAGNAALAGGKTDEALAWFDRALAVKGFA 174

Query: 222 -NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            N   A +   RS      G    +     E+ +L        + +A     Q+   +A+
Sbjct: 175 DNAALAAIQTDRSRALVALGRNAEAAGALDEAHRLAPEDAEGWLLSATLARRQDDLDRAQ 234

Query: 281 VILEKIWKVNP 291
             +E   K  P
Sbjct: 235 RDIEIAAKYAP 245



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 62/228 (27%), Gaps = 40/228 (17%)

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPW---VTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              +    D ++A       L  S D        + +      A ++  A+   +Q    
Sbjct: 72  LCLAKAASDPDAAMVEVQTWLGESRDTGQQVRANQCLGMLRSNAGDFDGALEAFSQAVTG 131

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA------KSLI 271
                    + L+A +   A  G          +           +  AA      ++L+
Sbjct: 132 IPREQEVAGVPLMAMAGNAALAGGKTDEALAWFDRALAVKGFADNAALAAIQTDRSRALV 191

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           +  +  +A   L++                                  +  E  E  ++ 
Sbjct: 192 ALGRNAEAAGALDEA-------------------------------HRLAPEDAEGWLLS 220

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
           + +A     +D+A     +A K APR     L A +    S   +   
Sbjct: 221 ATLARRQDDLDRAQRDIEIAAKYAPRDPQVGLEAGVIAVLSGRDEAAR 268


>gi|83311335|ref|YP_421599.1| TPR repeat-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82946176|dbj|BAE51040.1| TPR repeat [Magnetospirillum magneticum AMB-1]
          Length = 1218

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 18/143 (12%)

Query: 164 SCRIGDLNSAQRYATKA-----LDISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKK 215
               GD  +A     +A     L ++P  P      V+    Y      + +   L    
Sbjct: 265 KRVQGDYTAAATLLDQAVAIQKLAVAPTDPLSLSTRVEAGGLYHRQGRLAESQQILESAV 324

Query: 216 KNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLC--------DNSIMASIC 265
           ++A+  N  + +L     L +   D+G+  A+   A E L            N++ A   
Sbjct: 325 RDAQTANDQQNLLSAKGDLADVLDDRGEYDAAEKMAKEVLDAQTTALGAAHPNTVAALSS 384

Query: 266 AAKSLISQNKKRKAEVILEKIWK 288
            A     Q +  +AE    + W+
Sbjct: 385 LASIYRKQGRLLEAEKTFMEAWE 407


>gi|47229652|emb|CAG06848.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 600

 Score = 37.2 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L   +    +L+ ++  A +ALD++      +   ++     KE+  A+  L   +   
Sbjct: 50  GLERAAQAAKELDKSRH-AKEALDLARMQEQTSH--LEYQSKIKEYEAAVEQLKGDQIRI 106

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
           +   R + +    +  +   +     +     + L+
Sbjct: 107 QAEERRKTLNEETKQNQARAQYQDKLARQRYEDQLR 142


>gi|289666006|ref|ZP_06487587.1| fimbrial biogenesis protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 262

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 59/225 (26%), Gaps = 38/225 (16%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     + GD  SA+     AL     +      +        + + A        + A
Sbjct: 52  GLARNRLQTGDYASAEEQVRAALKKDAQSVDAIGLLALIQGAKGDTAAA----GVSYRRA 107

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKK 276
            E    R  +L          G    +      +L     +  AS    A    I   + 
Sbjct: 108 AELAPQRGDVLNNYGAWLCANGSPAEALTWFDRALADRTYASPASALGNAGGCAIKAGQP 167

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +A   L K                                 +++ ++  +L  ++++  
Sbjct: 168 ERAAGDLRKA-------------------------------LDLDPDNPYALESMARLEA 196

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
              +  +A A     +  AP    +  L  QIEQ          Y
Sbjct: 197 ARRNYFEARAFIERRLSAAPATASVLQLAIQIEQGLGDKVAAGRY 241


>gi|326315830|ref|YP_004233502.1| TPR repeat-containing protein [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372666|gb|ADX44935.1| TPR repeat-containing protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 1336

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 52/119 (43%), Gaps = 14/119 (11%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L+  LE   A          + +  + +IP      +   Y+++   GDL  A+RY   
Sbjct: 686 PLMRKLEAGSAE-------TRQAVAALREIPE--FLRLAGGYYQAQ--GDLARARRYYED 734

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSLEN 236
            L  SPD+  + +A++  ++ + + + A+  L   ++    ++ + + A+    ++L  
Sbjct: 735 GLRTSPDSSEMRQALIWLFIDSND-AVALRTLLTTQERGWARDEDVHDALAAAYQALSL 792


>gi|258510311|ref|YP_003183745.1| TPR repeat-containing protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477037|gb|ACV57356.1| TPR repeat-containing protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 206

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 5/115 (4%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT--REFAVYSLYFESCRIGDLNSAQRYAT 178
             L     A A     +A +  +  +Q  P +     A+ ++Y E  R      A  Y  
Sbjct: 84  AQLNAADSASANGNTALAIQYFKRAVQANPKSGLALTALGNMYRE--RENQPKEAIPYYQ 141

Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
           K++ + P   W    + Q Y+  KE S A   L Q  KN  + +   A +  A +
Sbjct: 142 KSIQVDPSYGWAYWQLAQAYLTLKETSLAKQTLEQGLKNVSKKDTAYADIQSALA 196


>gi|171320624|ref|ZP_02909644.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
 gi|171094137|gb|EDT39224.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
          Length = 285

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 8/144 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           ++A  N+ LA  ++  V  +H   +     L    +         A    E   Q     
Sbjct: 49  ALAGGNVELASTLYGKVLARH--PDSLAAQLGLGDVNYRAGDLERARILYEQARQQAPAD 106

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITF 210
                 L   + R   L+ A +     L   P+ P   +    V+       +   A   
Sbjct: 107 LGPQLGLARVALRQRRLDEAAQRYRDLLAAQPNLPLAAQGLGTVLDLQGRHAD---AQAV 163

Query: 211 LNQKKKNAKEWNRNRAILLIARSL 234
                    +    R  L ++  L
Sbjct: 164 YRDALSAHPDAQGLRVDLGLSLVL 187


>gi|83594141|ref|YP_427893.1| iron permease FTR1 [Rhodospirillum rubrum ATCC 11170]
 gi|83577055|gb|ABC23606.1| Iron permease FTR1 [Rhodospirillum rubrum ATCC 11170]
          Length = 660

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 6/152 (3%)

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES-----LKLCDNS 259
           S A            + N  RA   +  +LE   + ++ A    A+E+      KL    
Sbjct: 58  SGAAESYRAGDAETAKTNVQRAYFEVFENLEGPIRVNISAKASYALEAEFGAIRKLVMAG 117

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
                 AA++       R    +LE  +K+  HP  A          T    +      +
Sbjct: 118 APPEEVAARTTAQIAAIRAVVPVLEAGFKIKAHPA-AGAEDEAAPNPTPALPQTIEPYWQ 176

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              E++ + +  +  ALE G  D+A A    A
Sbjct: 177 RAVEAIGTDLYAAASALEAGKPDEAKALITRA 208


>gi|310800793|gb|EFQ35686.1| tetratricopeptide [Glomerella graminicola M1.001]
          Length = 818

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 35/251 (13%)

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSI--------AAHN--IPLARKMHSYVSQQH 114
             S  A LF  + +   DK YK    GL S            +     A  M++    + 
Sbjct: 5   LNSKEASLFRAVIRAYEDKQYK---RGLKSADLILKKNPKHGDTMAMKALIMNAQGKTEE 61

Query: 115 T--FHNEYLVYLLEVQI--------ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164
                 E L   ++  I          A + +  A +  +  L++          L    
Sbjct: 62  AFALGKEALTVDMKSHICWHVYGLLYRANKNFEEAIKAYKFALKLEPESTQIQRDLAILQ 121

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN------QKKKNA 218
            ++ D     +  T  L   P       A+   + LA + S A   L       +   + 
Sbjct: 122 VQMRDYAGYIQSRTAMLQARPQLRQSWTALAIAHHLAGDLSAAENVLTTYEGTLKSTPSR 181

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            ++  + A++   ++   A++GD   +      + K   + +      AK L+   KK +
Sbjct: 182 GDYENSEAVM--YKNTIIAEQGDYQRALEHLETAAKHSLDRLEYLELRAKYLVKLAKKEE 239

Query: 279 AEVILEKIWKV 289
           A       W+ 
Sbjct: 240 AV----AAWEA 246


>gi|307154460|ref|YP_003889844.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822]
 gi|306984688|gb|ADN16569.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822]
          Length = 724

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 43/184 (23%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PAT- 152
            +   A + +   S         +      +      Q   A +  + +++     P T 
Sbjct: 248 GDYRKATQAYYKAS------RTPVNLYRYARGLHLSGQKAQAKQAYQQLVRSFPDAPETG 301

Query: 153 ----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
               R   +             + A  Y   A++  P      +A++++       +  +
Sbjct: 302 EALMRLVGLSG----------SSEALGYLDYAINKFPLQ--APDALLKR-------AELL 342

Query: 209 TFLNQKKKNAKEWNRNRA------ILLIAR---SLENADKGDMIASYHDAIESLKLCDNS 259
             LN K+  +K   +              R   +   ADKGD++ ++  A        ++
Sbjct: 343 DLLNSKQAASKARQQLLVQYPNSEAAAGYRWKIAKSYADKGDLVKAWEWAQPITINAPDT 402

Query: 260 IMAS 263
            +A+
Sbjct: 403 TVAA 406


>gi|239978076|ref|ZP_04700600.1| hypothetical protein SalbJ_01475 [Streptomyces albus J1074]
 gi|291449976|ref|ZP_06589366.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291352925|gb|EFE79827.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 122

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           + A ++       T  ++     L E   E   + +++++       + +A  +    + 
Sbjct: 16  DRAQLFFEAKEYTTAVRI--LNGLVEEAPEHQGARLLLARAYYHSAQLGRAERELRTLLA 73

Query: 354 IAPRKEIFLLLA--QIEQANSHNTDK 377
             P +    LL    +E+   ++  +
Sbjct: 74  ADPVESYATLLLGRTLERQGRNDEAR 99


>gi|240982696|ref|XP_002403906.1| tpr and ank domain-containing protein, putative [Ixodes scapularis]
 gi|215491462|gb|EEC01103.1| tpr and ank domain-containing protein, putative [Ixodes scapularis]
          Length = 1169

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 55/181 (30%), Gaps = 21/181 (11%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---------LVYLLEVQIALAERQYNIAH 140
            G   I   +   AR       +Q     E          L  +L         + + A 
Sbjct: 252 RGAALIHTGDWEAARSAFKRAHRQKLPAEEDRARARRYLKLSCVLRGCELKLRDEADPAK 311

Query: 141 E--KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
                E +         +   LY  + +     +A   AT+A   +     +  ++ +  
Sbjct: 312 RSEVFEKLGD-----VLSKCGLYRPALKQ--YVNAADEATRAGASNRKMGELYASLAETC 364

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD---MIASYHDAIESLKL 255
               ++  A+T+  ++     +  +  A+  +  +     KG     +      +++++L
Sbjct: 365 KDVGDFDSALTYYQKELTYRDDDPKEAALTHLNVARVLLKKGKKGEQVDVRRALVQAVEL 424

Query: 256 C 256
            
Sbjct: 425 S 425


>gi|168701506|ref|ZP_02733783.1| hypothetical protein GobsU_18410 [Gemmata obscuriglobus UQM 2246]
          Length = 783

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 77/265 (29%), Gaps = 29/265 (10%)

Query: 106 MHSYVSQQHTFHNEYLVYLLEV----QIALAERQYNIAHEKLE----MMLQIPATREF-A 156
           M + ++         L   L      Q A+A + Y  A   L       L  P       
Sbjct: 214 MGALLTPDMLARLPALQKALLAIRATQAAIARQDYASAEAALAGCRPADLPDPIAAVVYL 273

Query: 157 VY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
           +   ++      G+ N A  +  +   + PDAP         Y+ + E   A        
Sbjct: 274 LRAGIH---LARGEPNEALAFLDQVERVEPDAPLTHLMRANCYLQSGE--HAKALAAADA 328

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
             A+    + A L    +LE  ++ D   +      +  L  ++    +   + L  +N+
Sbjct: 329 YIAQLGPDDEAELTRGSALEELNRLD--EARAAYRRANDLDPDAPDPLVALGRVLEPKNR 386

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-----KLKRALRLEEINKESVESLVI 330
               + +           +   +Y  +  E                L +   +    L  
Sbjct: 387 SELGDRLGRAA-------DPGRLYDAVRPEIADDDNGLAADALLDGLRKARPDEPRGLSA 439

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIA 355
             +  +  G  D A A     +KI 
Sbjct: 440 DVRRQVIAGRFDAARALLERGLKIE 464


>gi|170741717|ref|YP_001770372.1| hypothetical protein M446_3557 [Methylobacterium sp. 4-46]
 gi|168195991|gb|ACA17938.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
          Length = 347

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 11/89 (12%)

Query: 96  AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155
            A + P A  + +   Q     N     LL ++   A+    +A    E  L+       
Sbjct: 258 GAGDEPSAVALLARAGQLLQVGNVSGARLLLLRAGSADAMELLAQTYEEAFLRR-----L 312

Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDIS 184
            V  L       GD   A+ Y+  A  + 
Sbjct: 313 GVRGL------RGDPERARSYSEAAARLR 335


>gi|146339572|ref|YP_001204620.1| hypothetical protein BRADO2563 [Bradyrhizobium sp. ORS278]
 gi|146192378|emb|CAL76383.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 368

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 4/115 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R    + A     +A+ + P+ P +            ++  A+  L++  +       N 
Sbjct: 232 RRERWDRAVADYERAIRLDPNNPTLYHERGLALQQQGDFDEALVDLDRAVRMGF----ND 287

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             L   R      KG    +  D  ++LKL  +  +A+    ++L  + +++ A+
Sbjct: 288 PELYSDRGAVWLAKGRYDRALADFNQALKLNPDLAVAAARRDEALARKREQQIAD 342


>gi|157108807|ref|XP_001650397.1| hypothetical protein AaeL_AAEL005104 [Aedes aegypti]
 gi|108879239|gb|EAT43464.1| conserved hypothetical protein [Aedes aegypti]
          Length = 1740

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 63/205 (30%), Gaps = 42/205 (20%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAE--------RQYNIAHEKLEMML 147
            + P A+ M   ++            L   Q   A  E         +     EK E   
Sbjct: 617 GDKPAAKAMWHNLANIALAQQ----NLRVAQRCFAALENASKTFYIGEMIKISEKYEETT 672

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
             P      V      +   GDL SA+R   +  DI        EA +  Y   + W  A
Sbjct: 673 GNPGMSCPEVR--ARMALLGGDLRSAERIYIEQGDI--------EAALDMYKKLRRWDDA 722

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
           I    ++  +     + + +  +  + +    G+++    +  +++ L            
Sbjct: 723 IKLAERRGYHGLNELKEQQMEFLLNTSQEEKAGEVLEEREEKDKAMTL------------ 770

Query: 268 KSLISQNKKRKAEVILEKIWKVNPH 292
              +  NK  KA  +  K     PH
Sbjct: 771 --YMKANKPVKAAKLALKT----PH 789


>gi|222619979|gb|EEE56111.1| hypothetical protein OsJ_04970 [Oryza sativa Japonica Group]
          Length = 458

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 61/232 (26%), Gaps = 42/232 (18%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEM-MLQIPATREF-----AVYSLYFESCRIGDLNSAQR 175
             LL  +       +++A    +  +   P   E       + +L  ++    D  +  +
Sbjct: 183 ALLLRGRAYYYLADHDVASRHYQKGLRLDPEHSELKKAYFGLKNLLKKTKSAEDNAAKGK 242

Query: 176 Y---ATK---ALDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNR 225
               A     AL + PD       +                AI+   +      +     
Sbjct: 243 LRVSAEDYKAALAMDPDHTSYNVHLYLGLCKVLVKLGRGKEAISSCTEAL--NIDGELVD 300

Query: 226 AILLIARSLENADKGDMI-----ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           A+     +    +  +        +   A + LKL        I       S    ++A 
Sbjct: 301 ALTQRGEAKLLTEDWEGADMGIREALMRAEKQLKLSKRKDWYKILGISKTASAADIKRAY 360

Query: 281 VILEKIWKVNPHPE---------------IANIYTHLLSENTVGKLKRALRL 317
             L   W    HP+               IA  Y  L  E+   +  R   L
Sbjct: 361 KKLALQW----HPDKNVDNREEAENMFREIAAAYEVLGDEDKRVRYDRGEDL 408


>gi|162452538|ref|YP_001614905.1| hypothetical protein sce4262 [Sorangium cellulosum 'So ce 56']
 gi|161163120|emb|CAN94425.1| hypothetical protein sce4262 [Sorangium cellulosum 'So ce 56']
          Length = 1779

 Score = 37.2 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 99/341 (29%), Gaps = 58/341 (17%)

Query: 80   NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA---ERQY 136
               + ++      ++       LA    +   +      +    LL  Q A         
Sbjct: 701  RQPRLWELAQQAYVAAG----RLAEAARALCERALLADRKARPALLV-QAAELLLSAGDV 755

Query: 137  NIAHEKLEMMLQ-IPATREF---------------AVYSLYFESCRIGDLNSAQRYATKA 180
            + A +++E  ++  PAT                   V  L   +  +GD          A
Sbjct: 756  DGALDRVERAVEIDPATDAAPAIEDLYRRAHRWPELVRFLLSRAEVLGDRAERVAARRAA 815

Query: 181  LDISPDA--PWVTEAVVQQYVLAKEWSRAIT----------------FLNQKKKNAKEWN 222
              +  +        A +   +   + + AI                  L +K  +  +  
Sbjct: 816  AALQRELGDRDGERATLTLLLADGDDAEAIERLAQDAGERGDHQQGAELLRKLGDLTDSE 875

Query: 223  RNRAILLIARSLENADKGDMIASYHDAIESL--KLCDNSIMASICAAKSLISQNKKRKAE 280
              +  L +  +   A+    + +     E++   L   + +A    A     +   R   
Sbjct: 876  PGKISLALREARMLAEGPGDLEAAIARYEAVVATLDPQNRIALQGIADLEERRGNPRGVA 935

Query: 281  VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI--ALEM 338
              LE+        E+  +Y      + +   +R   L E   +     V   +I  A+E 
Sbjct: 936  GALER--------ELVLVY----GHDQIDIAQRLAALYEGPLDDPRGAVRALEIVHAVEP 983

Query: 339  GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
              +D       LA ++    ++  L+A + +    + +   
Sbjct: 984  DDLDAVARLLRLAERLNDWPKVARLMAILIEMEGDDDEASQ 1024


>gi|307108546|gb|EFN56786.1| hypothetical protein CHLNCDRAFT_59647 [Chlorella variabilis]
          Length = 227

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 3/94 (3%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257
               +  RA     +  +      R+  +LL  RS    + GD   +  DA  + +    
Sbjct: 108 ARGGDLQRAAQLYTRGIELQAPAGRH--LLLSNRSGVRLELGDAEGALQDANAAAECAPP 165

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +   A+I   ++L+     R A   L    + +P
Sbjct: 166 DFTTATIRQVEALLRLAHYRAAMECLLAARERHP 199


>gi|255537721|ref|XP_002509927.1| crooked neck protein, putative [Ricinus communis]
 gi|223549826|gb|EEF51314.1| crooked neck protein, putative [Ricinus communis]
          Length = 696

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 87/282 (30%), Gaps = 31/282 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER--QYNIAHEKLE-MMLQIPATRE 154
             I  AR ++     +    +E    L        E+  + + A    +  +  IP  R 
Sbjct: 239 GEIAKARNVYERAV-EKLADDEEAEELFVAFAEFEEKCKETDRARCIYKFALDHIPKGRA 297

Query: 155 FAVYSLYFESCRI-GDLNSAQ---------RYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             +Y  +    +  GD    +         +Y    +  +P         ++        
Sbjct: 298 EDLYRKFVAFEKQYGDKEGIEDAIVGKRRFQY-EDEVRKNPLNYDCWFDYIRLEESVGNK 356

Query: 205 SRAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD- 257
            R      +   N       R       L I  +L E  D GD+  +     E L L   
Sbjct: 357 ERIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDVERTRDVYRECLNLIPH 416

Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
              +     + A +  I Q   + A  IL       P  +I   Y  +  E  +G + R 
Sbjct: 417 KKFSFAKIWLLAGQFEIRQLNLKGARQILGNAIGKAPKDKIFKKYIEI--ELQLGNIDRC 474

Query: 315 LRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +L E       E+  +    +++   +   D+A A   LA+
Sbjct: 475 RKLYEKYLEWAPENCYAWSKYAELERSLAETDRARAIFELAI 516


>gi|221201240|ref|ZP_03574280.1| TPR repeat protein [Burkholderia multivorans CGD2M]
 gi|221206306|ref|ZP_03579319.1| TPR repeat protein [Burkholderia multivorans CGD2]
 gi|221173615|gb|EEE06049.1| TPR repeat protein [Burkholderia multivorans CGD2]
 gi|221179090|gb|EEE11497.1| TPR repeat protein [Burkholderia multivorans CGD2M]
          Length = 615

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 57/234 (24%), Gaps = 39/234 (16%)

Query: 126 EVQIALAERQYNIAHEKLE-MMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
               A    +   A       +   P       ++ +     + G    A     +A+ +
Sbjct: 7   RAYAAHRAGRLAEAEHGYRTALADNPADADALHLFGVLRH--QQGQHAEAADLVGRAVAL 64

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P    +   +            AI         A E+      L  A +         +
Sbjct: 65  RPGDAALQLNLGNALKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAA--------L 116

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
             + DA+++ +                                   + H  + N    L 
Sbjct: 117 QRHEDAVDAFRRALRLTPD-------------------------DASIHNNLGNALNALG 151

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +    L    R  E+      +   ++     MG  D+A A    A+   PR
Sbjct: 152 RHD--DALAAFRRALELRPGHAGAHNNLAMALNAMGRADEAIAHFQAAIAAQPR 203


>gi|194853861|ref|XP_001968236.1| GG24759 [Drosophila erecta]
 gi|190660103|gb|EDV57295.1| GG24759 [Drosophila erecta]
          Length = 944

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ----YVLAKEWSRAITFLNQKK 215
           LY E    G L  A     +AL   P  P   E + Q+        ++W  A     +  
Sbjct: 730 LYVE---QGKLQRALAVYREALSALPGLPQQREVLYQRIGDVLGRLQQWDEA----ERHH 782

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQN 274
           + A E   N+    ++  +  A      +      + +LKL           A+ L  Q+
Sbjct: 783 RAALELQPNQVAAHLSYGITLARNSSRASEAEMWFKRALKLAPEQASVYHHYAEFLALQS 842

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL----RLEEINKESVESLVI 330
           +  ++ +   +  ++ P+ + A +     +   + +   A     +   +  +   +   
Sbjct: 843 RHHESAIYHRRAAELAPN-DYALVVAAATAMRLLDRKAEAELWYRKAVALRPDDAHAHTN 901

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           +  I   +G  + A A    A+++ P
Sbjct: 902 LGAILHLLGRTNHAAASYKAALRLQP 927


>gi|308802694|ref|XP_003078660.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           (ISS) [Ostreococcus tauri]
 gi|116057113|emb|CAL51540.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           (ISS) [Ostreococcus tauri]
          Length = 332

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
            R   +A  + P    V  A+    ++++E+ +         +N  E  RNRA     ++
Sbjct: 1   MRLLERAFSLDPHNQAVNNAIADNLLMSEEYDKVEALTRAAIQNNGESARNRAKAAFNQA 60

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
                +G +  +      + +L ++ +              +   A   ++  W
Sbjct: 61  RALHARGAIPQAKALYGAATQLDESYVPP-------YFGLGQIALAAHDVKTAW 107


>gi|94971671|ref|YP_593719.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553721|gb|ABF43645.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 349

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 50/163 (30%), Gaps = 15/163 (9%)

Query: 117 HNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESC---RIGDLN 171
            N  L + L + + A A      A    +         +   + ++  E+    +  + +
Sbjct: 99  GNPELNIDLEKERAAQATANPANAEAVKKAEENKKENEKIGNLNTMLKEAQADMQAKNFD 158

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           +A +   KA         +   +   Y+ AK +  A+    +        + ++A +   
Sbjct: 159 AAIQIMEKATAQDATHDIIWAVLADAYLGAKRYPDAVKAYEKAIA----LDPSKAPVHNN 214

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +   A  G    +  +   + KL          A     ++ 
Sbjct: 215 YAQALAKTGQSDKAIAEYDAAAKLDP------AHAGSFYFNEG 251


>gi|32476506|ref|NP_869500.1| TPR repeat-containing protein [Rhodopirellula baltica SH 1]
 gi|32447051|emb|CAD78957.1| conserved hypothetical protein-putative containing TPR-repeat
           [Rhodopirellula baltica SH 1]
          Length = 1058

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 89/300 (29%), Gaps = 17/300 (5%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
           H    A       S      +      L  +IA  + ++++A   L+ +   P   E  +
Sbjct: 105 HQSRYAEAEELNRSLLLLRPDSPAALFLAARIAQGQNEFDVAISYLQAI--PPDHPEAGL 162

Query: 158 YSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
            +L   +      G    A+    + L    D   V   +            A   +   
Sbjct: 163 PALGQVADWLQDAGRFEEAESTYREMLSRFGDLVPVHRRLANLLNAQGRRVEATRHVEAL 222

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
            +      +    LL   +L      D   +      +  + +   +  +  AK L+ QN
Sbjct: 223 IRLGDVTEKE---LLSMTTLSVPYHDDEPLATELVSSTKPIHETLSLKDLARAKQLLVQN 279

Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVIV 331
           +   A+ ++ ++    P       +   + E   + +   K    L +  ++  E    +
Sbjct: 280 EAEDAKYLVRQLRAAFPDSSCVAAFEGRVYEALQSDLDLEKWFAALPKSVEQEAEYWTAI 339

Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY-----WTQSA 385
            + +L +     A      A++I P   +  L +A+                   W   A
Sbjct: 340 GQWSLRLKQPSVAIRAFGEAVQIDPTDRVAYLRMAEALAMLGELDAAERILKRKKWLDEA 399


>gi|298705986|emb|CBJ29107.1| TPR repeat [Ectocarpus siliculosus]
          Length = 220

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEIN 321
           A  L      R A     + +++NP       ++A I   +        L    ++   N
Sbjct: 31  APLLFEGGNVRAAMRHYRRAFQLNPKDVNSKNDLAVILWRMGKWEAA--LAALCQVLMAN 88

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            E  E+ V ++ +  + G  + A   A  A +I P  
Sbjct: 89  SEHYEANVNLAAVYFKQGEYELALRHARKATQIRPTS 125



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 43/141 (30%), Gaps = 4/141 (2%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A       L+   +     +++       G++ +A R+  +A  ++P        +  
Sbjct: 7   TGAIAYYREKLKQNPSNPAHHHNIAPLLFEGGNVRAAMRHYRRAFQLNPKDVNSKNDLAV 66

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                 +W  A+  L Q      E       L    +     +G+   +   A ++ ++ 
Sbjct: 67  ILWRMGKWEAALAALCQVLMANSEHYEANVNL----AAVYFKQGEYELALRHARKATQIR 122

Query: 257 DNSIMASICAAKSLISQNKKR 277
             S  A     + L      +
Sbjct: 123 PTSPKAHRVLGQILDQMGNVK 143


>gi|262199653|ref|YP_003270862.1| O-antigen polymerase [Haliangium ochraceum DSM 14365]
 gi|262083000|gb|ACY18969.1| O-antigen polymerase [Haliangium ochraceum DSM 14365]
          Length = 794

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/145 (10%), Positives = 35/145 (24%), Gaps = 10/145 (6%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A             +      +   + R GD   A+  A  A   +             +
Sbjct: 632 ARRVYAEHADDHEVQ----RVVADLAWRQGDHVLARSAAEPAYAATGALAEALILGQALH 687

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              +E   A   +        +            +     +GD +A+      +++L   
Sbjct: 688 AQGREDEAARVLVEAIAARRYDELWQLTRAHQVLAEVEDARGDPLAARTHLRTAIRLAPA 747

Query: 259 SIMASICA------AKSLISQNKKR 277
               ++ A      A+       + 
Sbjct: 748 HAGPAVRADLQRRLARLEERLGNRS 772


>gi|192293551|ref|YP_001994156.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192287300|gb|ACF03681.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 582

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 52/206 (25%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               D   AQ+   +AL + PD+P      + Q   A  WS     +   ++   +  R 
Sbjct: 336 LTRADSEMAQKLFAEALALDPDSPEA----LIQATAALAWS-----IWAGRQPQDQIQRM 386

Query: 225 RAILLIARSLENADK-------------GDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           R +   A   +  D                 + + +   +++ L  +  +A         
Sbjct: 387 RKLSQQAMLADPDDGRGFMLAGIAEMWLRHPLEAKNLLRQAITLTPSLALA--------- 437

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEINKESVESLVI 330
                               H ++   +      +  + +LK A+RL   +     SL  
Sbjct: 438 --------------------HAQLGGCFNLAGEPDRAIVQLKTAMRLSSNDPNIFYSLGE 477

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++     +G   +A   A LA+   P
Sbjct: 478 LALAYTMLGQWPEAIEHATLALARRP 503


>gi|115345669|ref|YP_771850.1| TPR domain-containing protein [Roseobacter denitrificans OCh 114]
 gi|115292990|gb|ABI93442.1| TPR domain protein [Roseobacter denitrificans OCh 114]
          Length = 537

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 37/128 (28%), Gaps = 15/128 (11%)

Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIA--------------LAERQYNIAHEKLEMML 147
            A    + +  +     E L  L                     +    + A    E  +
Sbjct: 352 AANIAAAELRIRAGAPQEALAMLKAAVAVREDPGALMRIGLIEESFGDDDTARAAYERFV 411

Query: 148 QIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +          L +   R G +L+ AQ  A +A  + P+   V + +     L  + + 
Sbjct: 412 AVQPGSYIGYNQLAWHLARRGIELDRAQELAERANTLQPENASVLDTLGWIAFLRGDGAG 471

Query: 207 AITFLNQK 214
           AI  L   
Sbjct: 472 AIERLRAA 479


>gi|15806891|ref|NP_295614.1| TPR repeat-containing protein [Deinococcus radiodurans R1]
 gi|6459674|gb|AAF11445.1|AE002028_7 tetratricopeptide repeat family protein [Deinococcus radiodurans
           R1]
          Length = 500

 Score = 37.2 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 83/314 (26%), Gaps = 59/314 (18%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY AL          +   A    +  +                  AL E    +A    
Sbjct: 222 GYVALSQAYQQQYMGSGDRASVTGNLDAALAVLQQAE-----AAVTALPEADRALAQS-- 274

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
                    +        +     G    A     +A  ++P+   +   +   Y  + +
Sbjct: 275 ---------KLLNERGSVY--RLQGKPTQAIEAFRQASALNPENSLLLFNLGDMYAASGQ 323

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              A++ L Q          NRA      +   A  G++ ++  +A ++ +L    +  +
Sbjct: 324 LPLAVSALQQAVILDPRDPYNRA----YYAKLLALSGNLTSARVEAAQASRL----VTGN 375

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322
             A                               + ++L  + T  + + A     ++  
Sbjct: 376 AYATGQYG--------------------------VVSYLAGDRTTARTQLAQA-VRLDPL 408

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE--IFLLLAQIEQANSH---NTDK 377
              E    + ++ L+   +  A      A+ +        + L    E+       +  +
Sbjct: 409 RYPEFYYYLGRLDLDGSDLKSARDNLTRAVALNSTSAEYAYYLGLAYERGVPGVAADNVR 468

Query: 378 ILYWTQSALHAMPD 391
                  AL   P 
Sbjct: 469 ARENYDKALKLAPG 482


>gi|297531322|ref|YP_003672597.1| hypothetical protein GC56T3_3090 [Geobacillus sp. C56-T3]
 gi|297254574|gb|ADI28020.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. C56-T3]
          Length = 490

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 106/328 (32%), Gaps = 47/328 (14%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE-KLEMMLQ 148
            G+ +    ++  ARK      +      +    L    +     +Y  +++   +++  
Sbjct: 27  KGMKAYDRGDLEKARKYFERAVRLD--ERDASFALQLALVLSELGEYQFSNQWLFKIIHD 84

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAK-EWS 205
           +  T    +Y L      +G    A++YA + L   P   +  +A  +++   L   EW+
Sbjct: 85  LDETMYDCLYFLANNFACLGLFREARQYAERYLAHEPAGEFADDAADLLELLRLDGSEWT 144

Query: 206 RAITFL----NQKKKNAKEWNRNRAILLIAR---------------SLENADKGDMIASY 246
                L    ++ ++  +E     AI  +                 +L     GD+  + 
Sbjct: 145 EEEEQLMVLEDRARRLLEEERFAEAIEALEAIVARYPDVWSAHNNLALAYFYSGDVDKAK 204

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HP-EIANIYTH 301
               E LK    ++ A   A        ++ +A  + E +  + P    H  ++   +  
Sbjct: 205 QKVREVLKRDPGNLHALCNALVFAYYLREEEQAAALCETLAGLYPFFREHQYKLGATFAL 264

Query: 302 LLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE- 359
           +   +   + L R  + +  + +       ++  A   G    A     +   + P K  
Sbjct: 265 VGRFDLAFRWLHRLYK-QGFDGDGPF-YYWLACAAYYTGHESLARQMWEVLATLHPEKRG 322

Query: 360 -------------IFLLLAQIEQANSHN 374
                        +  L+A +E     +
Sbjct: 323 EEPWAVSAPVDEALIRLMAWLEGDELAD 350


>gi|288941664|ref|YP_003443904.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
 gi|288897036|gb|ADC62872.1| Tetratricopeptide TPR_2 repeat protein [Allochromatium vinosum DSM
           180]
          Length = 666

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 39/132 (29%), Gaps = 8/132 (6%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L+ +         A+ +        P   +  + +       +    A++ L    K + 
Sbjct: 17  LFEQGRHADAEIKARLWTE----NYPHDAFGWKILGAILTTTQRHQEAVSVLKTALKLSP 72

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           E     A  L        D+G M  +      + +     + A    AK L    +  +A
Sbjct: 73  E----DAECLNTLGAALEDEGRMEEAGVLYARAARQAPGFVAAFYNLAKLLQRLGRLDEA 128

Query: 280 EVILEKIWKVNP 291
               E    +NP
Sbjct: 129 RFYFEHALSINP 140


>gi|330829040|ref|YP_004391992.1| response regulator with TPR repeat [Aeromonas veronii B565]
 gi|328804176|gb|AEB49375.1| Response regulator with TPR repeat, putative [Aeromonas veronii
           B565]
          Length = 548

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 79/270 (29%), Gaps = 55/270 (20%)

Query: 75  MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY-LVYLLEVQIALAE 133
               +       AL +   ++A  +  LA  + +   +             L+    L  
Sbjct: 130 SFRLKRALARRNALASVFTALA--DDNLAALITACAERADAVPRFANYCRCLQADTHLKL 187

Query: 134 RQYNIAHEKLEMMLQIPA---TREFAVY-----SLYFES--------------------- 164
            Q   A   +  +L        R           L+ E+                     
Sbjct: 188 GQAQEARALMRQLLAGQENSWARLTLGKACNTLGLHEEAVSHLQATLKNTPLMVEAHLWL 247

Query: 165 ----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-------NQ 213
                 +G+   AQ+   +A+DISP +  ++  + +  +   ++++A   L         
Sbjct: 248 AESLLALGNDEQAQQELRRAVDISPQSVQLSRRLAEVCLQRHDYAQAKDVLMSLIDLSRN 307

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS---------I 264
                  +       L   +L + D   +         +L    +S+M S         I
Sbjct: 308 SIHRTPHYLGAYIQTLTLYALNSNDSYHIANLQKQVNSALSRIRDSLMMSEFNYPVFEQI 367

Query: 265 CAAKSLISQNKKRKAEVILEKI---WKVNP 291
           C A+  I+  +  K + +L +    W   P
Sbjct: 368 CQARVQIALGELLKGKKMLYRANQNWLDEP 397


>gi|302849014|ref|XP_002956038.1| hypothetical protein VOLCADRAFT_66436 [Volvox carteri f.
           nagariensis]
 gi|300258764|gb|EFJ42998.1| hypothetical protein VOLCADRAFT_66436 [Volvox carteri f.
           nagariensis]
          Length = 340

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 6/160 (3%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVT 191
           ++++  A E      Q+  T     Y+L   E     D + A      AL + P      
Sbjct: 127 QKEHEAAIEFFLRAAQVDPT-FTYAYTLAGHEYFANEDYDKAAACYRSALKLDPRHYKAM 185

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             + Q     ++++ A+                 ++L     +  A  G    +     E
Sbjct: 186 YGLGQIAYRQEKYAEALQNFRLAAGINP----RSSVLRCYVGMSAAKLGQTPLALEKLQE 241

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           ++ L   + +A    A  L S  +  +A   LE + ++ P
Sbjct: 242 AIDLDPANPLARFERASVLASLERIGEALAELEALQRMAP 281


>gi|307727825|ref|YP_003911038.1| integral membrane sensor signal transduction histidine kinase
           [Burkholderia sp. CCGE1003]
 gi|307588350|gb|ADN61747.1| integral membrane sensor signal transduction histidine kinase
           [Burkholderia sp. CCGE1003]
          Length = 837

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 49/169 (28%), Gaps = 2/169 (1%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           +  AH   L   M    + Q       LV  ++   A        A      +L    + 
Sbjct: 472 AAKAHFTRLGAPMPEGRAMQAVLGGLTLVKAIDSGAASDADNTLFARAHWPALLDPARSE 531

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFL 211
              + +   E       +   RYA           W+     V   +   ++   A+  L
Sbjct: 532 FAGLMAQGVEVRDTNQRDHLLRYANCTNAQGETTGWIAGLVDVSALHAAERQREDALRLL 591

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           +   ++ +        +  AR      +G +      A  +L L D+ +
Sbjct: 592 SHDMRSPQASILALVEMERARETSALARGLLERIERYAQRALTLADDFV 640


>gi|297569320|ref|YP_003690664.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925235|gb|ADH86045.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 1335

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 70/248 (28%), Gaps = 19/248 (7%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           L  ++     +   A      +L        A   +       G    A  Y   AL   
Sbjct: 218 LAAEVHEDLGRSERAVAYWRRLLAKEPADPRAQARVEAHMLAAGSGEEALGYLQPALATD 277

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           PD PW+   + Q ++      +A+ +L +  +      +   + L A          ++ 
Sbjct: 278 PDNPWLLRRLGQVHLELGRPDQALPYLERALEGQPADQQVLQLALQAYDATGQQAESLLV 337

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL 303
                    +     +     AA+    + +  KA  +  +I    P  PE+      LL
Sbjct: 338 LERLLALEGEASPEKL---RQAAQIYQERGQYAKALELYPRIMAYYPDQPEVMAEKLRLL 394

Query: 304 S------------ENTVGKLKRALRLEEIN---KESVESLVIVSKIALEMGSIDQAHAKA 348
                         +   + +    L   +    +    +  +    LE G  + A    
Sbjct: 395 DRLGRENEIGLMLRSPGWRTRTPEILAAWHALEPDDGRVMTALVFAHLEQGEWEAAEEVL 454

Query: 349 MLAMKIAP 356
                +AP
Sbjct: 455 ARLAVVAP 462


>gi|258543040|ref|YP_003188473.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256634118|dbj|BAI00094.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256637178|dbj|BAI03147.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256640230|dbj|BAI06192.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256643287|dbj|BAI09242.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256646342|dbj|BAI12290.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256649395|dbj|BAI15336.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256652381|dbj|BAI18315.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256655439|dbj|BAI21366.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 287

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 10/229 (4%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAI 227
            +A+ +A+ A        W  EA +    +  +   A  +    +++    +E     A+
Sbjct: 40  ATARGHASAASGPLTGQKWSVEACMAM--VGDDPFGARDYALDWERHGNGGQEAKHCHAL 97

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEK 285
            L+    E +   ++    H  IE  +   +S  A +   AA + +S  +  KA   ++ 
Sbjct: 98  ALLEAGDEESAAQELDELAHQPIEHAERAPSSFRAGLEEDAADAWLSAGQPEKALSSVDY 157

Query: 286 --IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSID 342
              ++ +    +      L  +     +K    L     +   E+ V+++     +G +D
Sbjct: 158 GLAFEDDTRLHLLRARALLAQDQADVVVKELSALVAKKPDIGAEAYVLLASAERRVGQLD 217

Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
            A      A++I P     LL   I +    +        Q  L   PD
Sbjct: 218 AAATHVAHALEIEPENPAALLERGIVRERKGDATGAQADWQRVLDLAPD 266


>gi|258511714|ref|YP_003185148.1| transcriptional regulator, XRE family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478440|gb|ACV58759.1| transcriptional regulator, XRE family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 436

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 19/145 (13%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPAT------REFAVYSLYFESCRIGDLNSAQRYATKA 180
            ++ L       A    E +L   A       R  A + L   +  +GD  +A  +A +A
Sbjct: 196 ARLLLQYGPMEQARALYEGILARDAEPMSAVDRAHAHHGLACAAAAVGDYQAAIEHARRA 255

Query: 181 LDISPDAPWVTEAVVQQYVL---------AKEWSRAIT-FLNQKKKNAKEWNRNRAILLI 230
           +++           +                +   A++  L+ + + +      R  L  
Sbjct: 256 IEL---HEDAGNRALAMRCRINLGAFLRLGGDVEGALSHLLDLEDRTSPRDEVLRVALDH 312

Query: 231 ARSLENADKGDMIASYHDAIESLKL 255
             +L          +      +L +
Sbjct: 313 ELALTYQALHQPALAMERVSRALAM 337


>gi|221213587|ref|ZP_03586561.1| TPR repeat protein [Burkholderia multivorans CGD1]
 gi|221166376|gb|EED98848.1| TPR repeat protein [Burkholderia multivorans CGD1]
          Length = 615

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 57/234 (24%), Gaps = 39/234 (16%)

Query: 126 EVQIALAERQYNIAHEKLE-MMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
               A    +   A       +   P       ++ +     + G    A     +A+ +
Sbjct: 7   RAYAAHRAGRLAEAEHGYRTALADNPADADALHLFGVLRH--QQGQHAEAADLVGRAVAL 64

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P    +   +            AI         A E+      L  A +         +
Sbjct: 65  RPGDAALQLNLGNALKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAA--------L 116

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
             + DA+++ +                                   + H  + N    L 
Sbjct: 117 QRHEDAVDAFRRALRLTPD-------------------------DASIHNNLGNALNALG 151

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +    L    R  E+      +   ++     MG  D+A A    A+   PR
Sbjct: 152 RHD--DALAAFRRALELRPGHAGAHNNLAMALNAMGRADEAIAHFQAAIAAQPR 203


>gi|148256960|ref|YP_001241545.1| TPR domain-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146409133|gb|ABQ37639.1| putative exported protein of unknown function with TPR domain
           protein [Bradyrhizobium sp. BTAi1]
          Length = 279

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298
           GD  A      E  +   N    ++    +L    ++ +A  +LE+    NP +  +   
Sbjct: 45  GDPRAELDQLRERFRATPNDPDVALRYGTALRGTGQRSQAVAVLEQATIANPSNKALLAA 104

Query: 299 YTHLLSEN-----TVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLA 351
           Y   L++N         L RA        E  +  ++ ++ A   ++G  D+A      A
Sbjct: 105 YGRALADNGNFQQAFDVLSRAHS-----PEDPDWRILSAQGATLDQLGRHDEARQYYATA 159

Query: 352 MKIAPR 357
           +KIAP 
Sbjct: 160 LKIAPD 165


>gi|138895773|ref|YP_001126226.1| TPR repeat-containing protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267286|gb|ABO67481.1| TPR-repeat-containing protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 418

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 294 EIAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           E+A+ +Y   + E   G L     L     +  +  + ++++  E+ + D+A A      
Sbjct: 37  ELADCLYAWGMPEEAKGLL---EELAARYPDDGDIRLFLAEVYTELEAEDEALAILDEIS 93

Query: 353 KIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393
           +  P+     LL A + +             Q+   A  +P+
Sbjct: 94  EDDPQFVRACLLAADLYEMQGLTEVSERKLRQAYKKAPDEPV 135



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 85/304 (27%), Gaps = 57/304 (18%)

Query: 103 ARKMHSYVSQQHTFHNEYLVY--LLEVQIALAER----QYNIAHEKLEMMLQIPATREFA 156
           A      +  + +  +   V   LL   +   +           +  +     P  +   
Sbjct: 81  AEDEALAILDEISEDDPQFVRACLLAADLYEMQGLTEVSERKLRQAYKKAPDEPVVQFA- 139

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFL 211
              L      +G+   +  +      +      +   ++     +    + E+  A+ + 
Sbjct: 140 ---LAELYFSLGEYAKSVPFYE---QVQKSTREMAGVLLVERLAEALTRSGEFEAALPYY 193

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
            +      +        L A        G    +        +L  +     +  AK+  
Sbjct: 194 EEALNEKTDSR-----TLFAYGFTALQAGYAQTAIDKLSALKELDPDYAPLYLYLAKAYE 248

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
            + + RK+                         E  +  +K       I++ + E  + +
Sbjct: 249 QEGQLRKSY------------------------ETALEGIK-------IDEWNKELRLYI 277

Query: 332 SKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAM 389
            K+AL++    +A  +   A++I     E   +L+ +        D +    + A+    
Sbjct: 278 GKLALKLNKPAEAEEQLKKALEIDGGYIEALTVLSALWLHEQRYEDVV-ALLERAMADGE 336

Query: 390 PDPL 393
            DP 
Sbjct: 337 YDPQ 340


>gi|115375605|ref|ZP_01462862.1| TPR repeat protein [Stigmatella aurantiaca DW4/3-1]
 gi|310823162|ref|YP_003955520.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115367381|gb|EAU66359.1| TPR repeat protein [Stigmatella aurantiaca DW4/3-1]
 gi|309396234|gb|ADO73693.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 333

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 37/157 (23%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                  +  +AR+    D GD   +  +   +L        A    A+           
Sbjct: 87  PHEHLYRVNHLARARTLRDMGDPAGALTECRRALHDAPGDEEALRLLARLGPLVG----- 141

Query: 280 EVILEKIWKVNPHPEIANIYT----HLLSENTVGKLKRALRLEEI--------------- 320
                       HP++A +      ++L E+    +++A  L  +               
Sbjct: 142 ------------HPDLAALALSRLGNVLPEDASPLIQQARLLISLSAFPEAVRVGEEALL 189

Query: 321 -NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              E  E   ++    L  G + +A  +   A+ +AP
Sbjct: 190 RAPEEPEVYQVLGLAHLAAGELPRAILRFQQAVHLAP 226


>gi|109108870|ref|XP_001098303.1| PREDICTED: tetratricopeptide repeat protein 36 isoform 1 [Macaca
           mulatta]
          Length = 189

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 11/141 (7%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            Q+  ++   +  +   +   GDL++A     +A+ + P+         Q   L  + + 
Sbjct: 46  AQLEQSKALELQGVM--AAEAGDLSTALERFGQAICLLPERASAYNNRAQARRLQGDVAG 103

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI------ 260
           A+  L +  + +    R      + R L    +G    +  D   + +L           
Sbjct: 104 ALEDLERAVELSGGRGRAARQSFVQRGLLARLQGRDDDARRDFERAARLGSPFARRQLVL 163

Query: 261 --MASICAAKSLIS-QNKKRK 278
               +    + L     + R+
Sbjct: 164 LNPYAALCNRMLADMMGQLRR 184


>gi|67521604|ref|XP_658863.1| hypothetical protein AN1259.2 [Aspergillus nidulans FGSC A4]
 gi|74598337|sp|Q5BDX1|CLF1_EMENI RecName: Full=Pre-mRNA-splicing factor clf1
 gi|40746696|gb|EAA65852.1| hypothetical protein AN1259.2 [Aspergillus nidulans FGSC A4]
          Length = 602

 Score = 37.2 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 19/183 (10%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADKGDM 242
           W   A +++     +  R      +              R    L I  +L E  +  D+
Sbjct: 253 WFDFARLEEQS--GDPERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDI 310

Query: 243 IASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             +     E LKL            +  A+  + Q   + A   L +   + P  ++   
Sbjct: 311 DRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDKLFRG 370

Query: 299 YTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           Y  L  E  + +  R   L E     N  + +S +  +++   +   ++A A   L +  
Sbjct: 371 YIDL--ERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQ 428

Query: 355 APR 357
            P 
Sbjct: 429 -PT 430


>gi|326388944|ref|ZP_08210526.1| hypothetical protein Y88_3688 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206544|gb|EGD57379.1| hypothetical protein Y88_3688 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 444

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 36/133 (27%), Gaps = 9/133 (6%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIP------ATREFAVYSLYFESCRIGDLNSAQRYATKA 180
            + A     Y+ A   L  ++  P        R      L     R     +A     + 
Sbjct: 44  AEAASKRGDYDTAERALRALIGNPGIDIRCEARFRLARLLAGPFHRR--TEAALLL-RRI 100

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
           LD  P+A  V   + +          A   L   +      +  R +    ++LE     
Sbjct: 101 LDEKPNAAPVRLELARLEAEMGRTGAAGRELRAAQAIGLPADIARMVRFYQQALEAQRPM 160

Query: 241 DMIASYHDAIESL 253
                   A +S 
Sbjct: 161 SGSIELALAPDSN 173


>gi|320106624|ref|YP_004182214.1| cellulose synthase operon C domain-containing protein [Terriglobus
           saanensis SP1PR4]
 gi|319925145|gb|ADV82220.1| cellulose synthase operon C domain protein [Terriglobus saanensis
           SP1PR4]
          Length = 1777

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 12/138 (8%)

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRL 317
           ++  A    +Q   ++   IL    +  P +P     +A+ Y           + +A  +
Sbjct: 791 AVRRANQASAQGYVKRPLAILNAAARAFPDNPGVIKALASGYLRAGLPKQATAIFKAQDM 850

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376
                   +S V     A+  G +  A       ++  P   ++  L A+ EQA   ++ 
Sbjct: 851 TSATASDYKSAV---GAAIASGDLKDAETWLRFGLEQYPKDSQMLTLAAKFEQA-RGDSG 906

Query: 377 KILYWTQSALHA--MPDP 392
           +   + +++L A    DP
Sbjct: 907 RAADYYRASLAAMPPADP 924


>gi|218778051|ref|YP_002429369.1| hypothetical protein Dalk_0192 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759435|gb|ACL01901.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+  K++  AI+  +       E N      L  R     + G    +  D  ++L L  
Sbjct: 226 YLEMKKYHAAISTFDAAL----EKNSANVEALRWRGKTYGETGREDLALADWQKALDLDP 281

Query: 258 NSIMASICAAKSLI---SQNKKRKAEVILEKIWKVNP 291
           N+      AA+ L     Q +K +A  +  K   + P
Sbjct: 282 NNSDIMAHAARILFLSQDQGQKSRAMTLARKAVNLQP 318


>gi|162453967|ref|YP_001616334.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161164549|emb|CAN95854.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 865

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 85/268 (31%), Gaps = 47/268 (17%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD-LNSAQRYATKALDISPDAPWV- 190
           + ++  A + +  +   P            E    G+          +A+  +P   +  
Sbjct: 292 QGRHETAEQTIARVRSGPPR--------AIEEVARGEVPEELHALCRRAMARAPADRYAH 343

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----------ARSLENADKG 240
             A+++     ++W        +  +  +E +R     +           A S E  D+ 
Sbjct: 344 AGALME---AVRDWLDGADRQERAVRIVEEAHREHRARIARLRAKADHHRAASREILDRL 400

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQ----NKKRKAEVI---LEKIWKVNPHP 293
                  D  E  KL D+   A+    ++L  +     K R A      LE+      H 
Sbjct: 401 RSFDGAQDKAEGWKLADD---AAALDQEALREEIYWTQKLRSALNEVPGLEEA-----HG 452

Query: 294 EIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
            +A  Y    + +E    +   A RL  + ++    L    +   E      A    + A
Sbjct: 453 ALAEHYADSLVRAEAKRDRPA-ATRLAALVEDHARHLPADGRARYEALLRGDARLTLVTA 511

Query: 352 MK-----IAPRKEIFL-LLAQIEQANSH 373
            +     I P + +   L+A  E+  + 
Sbjct: 512 PEGARVTIKPYEPVNRYLMASDERTRTA 539


>gi|115374915|ref|ZP_01462187.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310819227|ref|YP_003951585.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
            DW4/3-1]
 gi|115368042|gb|EAU67005.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309392299|gb|ADO69758.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1091

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 2/104 (1%)

Query: 109  YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
                + T   E L  L      L   QY +A      + ++  TR  A  +L +     G
Sbjct: 969  RKKAEATLSAEALEAL--GMAYLDNHQYALAQLTFGRVTELQDTRAGAHNALGWALLNQG 1026

Query: 169  DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212
            D  SA+    KAL+  P        +        +   A   L+
Sbjct: 1027 DAMSAREAYAKALEADPTYGKARLNLAALRCRFGDTQGAKRELS 1070


>gi|260893921|ref|YP_003240018.1| Tetratricopeptide TPR_2 repeat protein [Ammonifex degensii KC4]
 gi|260866062|gb|ACX53168.1| Tetratricopeptide TPR_2 repeat protein [Ammonifex degensii KC4]
          Length = 212

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 22/179 (12%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKAL 181
           AL E +   A +     +Q        +    FE+         + G+L         A+
Sbjct: 35  ALQEGRLEEAEDYFLEAIQN------GLR--MFEAWVNLGYIYFKRGELEKVIEANKAAI 86

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           +I P        +   Y+  +    AI+ L +      E     A            KGD
Sbjct: 87  EIEPRYSRGYANLGFAYLQLERTEEAISALEKAL----ELEPRMAQAWCNLVSAYLQKGD 142

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-P-HPEIANI 298
           +  +      ++++  +  +A    A +   +    +A   LE   K   P HPE    
Sbjct: 143 IDKAIEVGKTAVEVAPDFGLAHNNLACAYYLKGDYERAAEHLELALKYQFPVHPEFQEA 201



 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 57/185 (30%), Gaps = 6/185 (3%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           G+M++    +  A        Q      E  V L    I     +     E  +  ++I 
Sbjct: 32  GVMALQEGRLEEAEDYFLEAIQNGLRMFEAWVNL--GYIYFKRGELEKVIEANKAAIEIE 89

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
                   +L F   ++     A     KAL++ P        +V  Y+   +  +AI  
Sbjct: 90  PRYSRGYANLGFAYLQLERTEEAISALEKALELEPRMAQAWCNLVSAYLQKGDIDKAIEV 149

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270
                + A ++      L  A  L    KGD   +      +LK           A K  
Sbjct: 150 GKTAVEVAPDFGLAHNNLACAYYL----KGDYERAAEHLELALKYQFPVHPEFQEAMKPY 205

Query: 271 ISQNK 275
           + + K
Sbjct: 206 LKRGK 210


>gi|153864236|ref|ZP_01997201.1| TPR repeat protein [Beggiatoa sp. SS]
 gi|152146267|gb|EDN72797.1| TPR repeat protein [Beggiatoa sp. SS]
          Length = 471

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 53/176 (30%), Gaps = 27/176 (15%)

Query: 130 ALAERQYNIAHEKLEMML------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           AL + +   A E+    L        P T     + L          ++A++   +A  I
Sbjct: 204 ALMQNKLQEAAERYREALAIFQRLNEPETEAVLHHQLGMVYQEAKQWDAAEQAYREAARI 263

Query: 184 S--------PDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRAILLIA 231
                        W   A+V +   A ++  A       +   K    +   ++ +  +A
Sbjct: 264 QESQGNLAGAAQTWNQLALVNK--GAGKFEAAEGWYRKAIEGGKTAGDKVGVSKRLNNLA 321

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASI-------CAAKSLISQNKKRKAE 280
             L+      +  +   A E+L +      A           A+    +N   KA 
Sbjct: 322 DLLQTNYPHRLPEARQLAEEALAIKKTLDPAVSEIWKNYNVLAEIAEQENDATKAA 377


>gi|118469421|ref|YP_888705.1| transcriptional regulator [Mycobacterium smegmatis str. MC2 155]
 gi|118170708|gb|ABK71604.1| transcriptional regulator [Mycobacterium smegmatis str. MC2 155]
          Length = 759

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 13/141 (9%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI- 183
           +E   A  E   + A       L        A+  +Y  + +IGD+ +A   A +A  + 
Sbjct: 449 IEAVAAGLEG-VSAAEGSARAGLSEQ---LVALREVY--AFKIGDVTNALDAARQAATLE 502

Query: 184 ---SPDAPWVTEAVVQQYVL-AKEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLENA 237
              +P A           +  + +   A T L +           R+R   L   +L  A
Sbjct: 503 VGEAPPARSAAHVTYGAALYFSGDIDEARTELQRAVELTERTGDRRHRVYALGYLALIEA 562

Query: 238 DKGDMIASYHDAIESLKLCDN 258
           + G +  + H    +  +  +
Sbjct: 563 ESGQLADAEHLIRRATGVGPD 583


>gi|107099666|ref|ZP_01363584.1| hypothetical protein PaerPA_01000684 [Pseudomonas aeruginosa PACS2]
          Length = 575

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 43/258 (16%)

Query: 109 YVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            +++      E L   LL  + A        A                     Y E    
Sbjct: 93  RIAEYLGADQEALDTSLLWARSAPDNLDAQRAAAIQLARAGRYEESMV-----YMEKVLN 147

Query: 168 GDLNS-----AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           G  ++     A   A    D         + ++++Y    +                   
Sbjct: 148 GQGDTHFDFLALSAAETDPDTRAGLLQSFDHLLKKYPNNGQ------------------- 188

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
                LL  ++L     G    +    +E      + +   +  ++ L S  +  +A  +
Sbjct: 189 -----LLFGKALLLQQDGRPDEALTL-LEDNSASRHEVAPLLLRSRLLQSMKRSDEALPL 242

Query: 283 LEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           L+   K   HP+     +A     +              L +   +  +    ++ + LE
Sbjct: 243 LKAGIKE--HPDDKRVRLAYARLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLE 300

Query: 338 MGSIDQAHAKAMLAMKIA 355
             + D+A       ++  
Sbjct: 301 AQAWDEARIYLEELVERD 318


>gi|107022454|ref|YP_620781.1| cellulose synthase operon C-like [Burkholderia cenocepacia AU 1054]
 gi|116689403|ref|YP_835026.1| cellulose synthase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105892643|gb|ABF75808.1| cellulose synthase operon C-like protein [Burkholderia cenocepacia
           AU 1054]
 gi|116647492|gb|ABK08133.1| cellulose synthase operon C domain protein [Burkholderia
           cenocepacia HI2424]
          Length = 1297

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 97/350 (27%), Gaps = 76/350 (21%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL--------------- 121
            +   D  Y A   GL ++A  ++  A  + +  ++      + L               
Sbjct: 291 RRLERDPDYIAQQRGLQALARGDLAAADPLLARAARARPDDADALGGLGLLRLREGRHDE 350

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
              L  + A           K + + +    + + + +   E+   G    A+R A  AL
Sbjct: 351 ARALFARAATRATDQ---RGKWQGLART--AQFWGLLAQGREAASAGRQRDAERAARAAL 405

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRA---------------------------------- 207
            + PD P     +    +  ++W+RA                                  
Sbjct: 406 AMQPDNPDAKLQLADALLAQRDWARAEPLLRGLLAARSPSLSAVRDTATLYENTGRADRI 465

Query: 208 ---ITFLNQKKKNAKEWNRNRAI---LLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
              +  L  +   A +      +   +L   +   ADKG    +      +++   ++  
Sbjct: 466 GPLLDALQGRVTGADDRRTLDGLRGDVLANEARALADKGARGPAAQRYEAAVRAAPDAPW 525

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHP--------------EIANIYTHLLSENT 307
                A+        +    +++    ++  P              ++A     L   + 
Sbjct: 526 TRFALARLYRDMGLPQLGRTVMDDGLALSDTPEMRYANALYRNSLDDVAGAQAALAPVDD 585

Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +      L    K   ES +  ++ A   G      A    A   AP 
Sbjct: 586 AHRSDGMRALA--RKLDAESALADARGAHARGDRAAFAATLAHAQASAPD 633


>gi|74316784|ref|YP_314524.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74056279|gb|AAZ96719.1| conserved hypothetical protein containing TPR repeat [Thiobacillus
           denitrificans ATCC 25259]
          Length = 369

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 4/133 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                    + + A   L   L+I      A   L       G   +A+      L  SP
Sbjct: 192 RAAALAQGGRESEARTLLGDTLRIAPGHAAARQLLATLLHEAGQYGAAEATLAAGLRASP 251

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           D PW   ++ +      + + A+  L     +  E     A      +      G    +
Sbjct: 252 DHPWFALSLARVQAERGDIAAAVATLG----DGIERRTVDAEYRATLAALLLSIGRPGEA 307

Query: 246 YHDAIESLKLCDN 258
                +++K    
Sbjct: 308 ARQYEQAVKTAPG 320


>gi|103488644|ref|YP_618205.1| tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256]
 gi|98978721|gb|ABF54872.1| Tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256]
          Length = 604

 Score = 37.2 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 2/116 (1%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
           E +   A   L   L+   T   A+  L   + RIG    A++  T+AL+++P       
Sbjct: 84  ENRLPDAEAALRARLKEDPTDVAAIRMLAEVAGRIGRYGDAEKLLTRALELAPGFGAARA 143

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
            +         ++ A+  L+    +  +   +    L A +L      D   + + 
Sbjct: 144 NLATVLYKQNRYAEAVETLDAVLTDDPDNPAH--ANLKAAALGRIGGYDEAIALYA 197


>gi|294955736|ref|XP_002788654.1| anaphase promoting complex subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239904195|gb|EER20450.1| anaphase promoting complex subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 848

 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 52/192 (27%), Gaps = 15/192 (7%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY-S 159
             ARK H     +    +  +   L               E    + +    +    Y  
Sbjct: 537 MAARKFHKL--HERYPSHFGITLDL-AMSLYESGDLECTREVFGQLQEWDTIKGADSYAG 593

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R  DL +    A + L I   A      +   +   ++   A     +K     
Sbjct: 594 LLKLIDRPKDLAA---LAHRCLGIDQYAAETMFVMGVYHSSCQDTINA-KVYYRKASRLY 649

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                +   L+  + E   +G +  +     E+ +L   S      A     +Q     A
Sbjct: 650 TRTVEKGTALVCLANECMQEGVVADAISALREATELDPTS-----MA--VYEAQGHMNYA 702

Query: 280 EVILEKIWKVNP 291
                K  ++ P
Sbjct: 703 AYYYRKAVELRP 714


>gi|261342609|ref|ZP_05970467.1| lipoprotein NlpI [Enterobacter cancerogenus ATCC 35316]
 gi|288315256|gb|EFC54194.1| lipoprotein NlpI [Enterobacter cancerogenus ATCC 35316]
          Length = 294

 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|225685112|gb|EEH23396.1| DnaJ and TPR domain-containing protein [Paracoccidioides
           brasiliensis Pb03]
          Length = 524

 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 7/167 (4%)

Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  L       A    +  +         +           +G    A 
Sbjct: 29  DTPLSSLISTAKTHLKNGAPQDALPYFDAAISRDPANYLTIFQRG--ATYLSLGKSAKAL 86

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIAR 232
           +   + L I PD         +  + + +W+ A   L    KN        + A      
Sbjct: 87  QDFNEVLKIKPDFEGALLQRARLNMKSADWAAAKKDLVAAGKNTAAEIAELDEAQGAARL 146

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +     KGD  A    +  ++     S+      A     + + ++A
Sbjct: 147 AQAAEKKGDWEACVSQSGVAILKAPQSLPLRQLRAHCRFERGEIQEA 193


>gi|254516175|ref|ZP_05128235.1| Methyltransferase domain family protein [gamma proteobacterium
           NOR5-3]
 gi|219675897|gb|EED32263.1| Methyltransferase domain family protein [gamma proteobacterium
           NOR5-3]
          Length = 517

 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 74/221 (33%), Gaps = 6/221 (2%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
            G++         A + +          +E L  L         +QY  A    + ++  
Sbjct: 99  RGVILSRLAEPEHAIEAYKSALALEPAFSEALNNL--ASAFTDLKQYKEALGCYQELVNR 156

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
                    +L       G   +A     +AL ++P        +        E   AI 
Sbjct: 157 GEADAEVYANLARALKGAGQTENALEALRRALQLNPLYTDAFNDLGNLLNDMGEHDEAIK 216

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
                   + E    + +L +ARSL    K    A+     E + L  +S  A    A +
Sbjct: 217 AYRSAL--SLEPKHRKVLLNLARSLSAMYK--HKAALIVYKELVTLEPHSEDALRGTANT 272

Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           L++ +  ++A   L+++ ++ PH + A      +S   + +
Sbjct: 273 LLALSLDQEAGDYLQRLLELKPHDKTAKHLLAAVSGQAITR 313


>gi|163793621|ref|ZP_02187596.1| hypothetical protein BAL199_03899 [alpha proteobacterium BAL199]
 gi|159181423|gb|EDP65938.1| hypothetical protein BAL199_03899 [alpha proteobacterium BAL199]
          Length = 441

 Score = 37.2 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 73/209 (34%), Gaps = 12/209 (5%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G +++A    T+AL+  P  P     +   ++   +   A+ +  +        +   
Sbjct: 20  RSGRMDAASALYTRALEFDPTDPDALHLLGALHIQRGDAVAAVPYAAKAVLVEPAAH--- 76

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            +      L     G   A+     ++  +  +           + +  +   A     +
Sbjct: 77  -LAYNNLGLILKGAGQPGAAARCYRQATLIEPDFADGHSNLGVVVKADGQMALAVKHFRR 135

Query: 286 IWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
             +++  P +   + +L +       T G ++  L   +   ++      V  + + +G 
Sbjct: 136 AIEID--PSLGEAWNNLGNALQELGETEGAVEAYLTAADCLPDNDTVHYNVGLLLIGVGC 193

Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIE 368
            D A      A+++ P R++   L+A +E
Sbjct: 194 RDDALIHLRRALELDPDREDAAHLVAALE 222


>gi|332708456|ref|ZP_08428432.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
 gi|332352787|gb|EGJ32351.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
          Length = 660

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 14/183 (7%)

Query: 71  MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130
            L       +  K +  L  G ++        A + +         H E  V L  VQ+ 
Sbjct: 277 ALKGKFVSPSQRKAWGLLKQGKLA-------EAVQAYQKCLTNQPNHGEAAVELALVQMH 329

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           L + Q  +A E    +      R + V  L    CR  + ++A +   +A  ++P   W+
Sbjct: 330 LNDSQAEVAAETAIRLQPNDG-RSYGVLGLVN--CRKSNWSTAVKQLQQAAKLAPQEVWI 386

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
              +   +     W +A + +++  +     + N    L  ++  N ++     +   A 
Sbjct: 387 QANLAWAWGKLGNWQQAESAVSKALQ----IDSNCTFALGLQAWINVNQQQWKRAIRTAT 442

Query: 251 ESL 253
           ++L
Sbjct: 443 QAL 445


>gi|297159761|gb|ADI09473.1| protein kinase family protein [Streptomyces bingchenggensis BCW-1]
          Length = 785

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 34/112 (30%), Gaps = 2/112 (1%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
             L+ +A   +  AR+    V        EY   L     A     ++ A    + + Q 
Sbjct: 567 RALVRLAEGAVAEARREFDAV--YGALPGEYAPKLALGYCAEHLADHDAAERFYQAVWQR 624

Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
             ++  A + L       GD   A    ++   +S        A V+     
Sbjct: 625 NRSQGSAAFGLARLRLAAGDRTGAVDVLSEVPKVSRHHDAAQIATVRVLAGR 676


>gi|296104877|ref|YP_003615023.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059336|gb|ADF64074.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 294

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|307727336|ref|YP_003910549.1| glycosyl transferase family 9 [Burkholderia sp. CCGE1003]
 gi|307587861|gb|ADN61258.1| glycosyl transferase family 9 [Burkholderia sp. CCGE1003]
          Length = 738

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 94/327 (28%), Gaps = 51/327 (15%)

Query: 73  FHMLHKRNYDKGYKALYTGLMSI--AAHNIPLARKMHSYVSQ---QHTFHNEYLVYLLEV 127
            H         GY  +Y    ++  A  ++  A+ ++  +      H   +  L  +L  
Sbjct: 97  RHWRRCLRMMPGYVEVYESFGALLKARGHLTAAKAIYRRLIALQPDHADAHNQLGAVLHA 156

Query: 128 QIALAERQYNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISP 185
           Q      Q+  A +     +   P   E    + +   + R  D   A     + L + P
Sbjct: 157 Q-----GQHEEAEKSYRHALALRPEHAEAHYNHGVVLHALRRLDEAEAAY--RETLRLLP 209

Query: 186 DAPWVTE-----------------AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
                                   A     V+  ++  A+  L    K A          
Sbjct: 210 AHAQAHNNLGNVLMDLGRVAQADAAYRDALVVRPQYPEALNNLAGALKAANRLTEAELAC 269

Query: 229 LIARSL-------------ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
            +A +L                D   +  +     ++  L  +   A      +L    +
Sbjct: 270 RLALTLRPDYAEAYVNLGATLTDLARLAEAEAAYRKANVLRADYAEAHYNLGVTLFKLER 329

Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVI 330
             +A     +  ++   P+IA  + +L     + +     ++   +   +  E  E+   
Sbjct: 330 LDEAAAAYREAVRLR--PDIAPAHNNLGCVLRVLDRLAEAVESFKQALSLQPELAEAHYN 387

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +     ++G   ++ +    A+ +   
Sbjct: 388 LGSALAQLGRFPESESAYRRALALRND 414


>gi|209965777|ref|YP_002298692.1| thioredoxin, putative [Rhodospirillum centenum SW]
 gi|209959243|gb|ACI99879.1| thioredoxin, putative [Rhodospirillum centenum SW]
          Length = 310

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 42/139 (30%), Gaps = 2/139 (1%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
            ++           ++    L E +  L +     A      +LQ       A   L   
Sbjct: 122 DRLLQATGAAAPGGDDIATVLEEAKQILDQGDAEGAAAVYNEVLQAEPENAVAYVGLVRC 181

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
              +G  + A++    A      +P +   ++ +     A++       +N+  ++  + 
Sbjct: 182 LLAVGQTDDARKLIEGAPAAIAKSPELAGLKSQLDLADQARQAGPVPELMNRLARDPDDH 241

Query: 222 NRNRAILLIARSLENADKG 240
                + L   +   A+  
Sbjct: 242 QTRYDLALALYAAGKAEAA 260


>gi|86609662|ref|YP_478424.1| photosystem I assembly protein Ycf3 [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|123737973|sp|Q2JJK6|YCF3_SYNJB RecName: Full=Photosystem I assembly protein ycf3
 gi|86558204|gb|ABD03161.1| photosystem I assembly protein Ycf3 [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 173

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 10/101 (9%)

Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
           +   A +E +Y  A E       + Q    R + +Y++       G+L+ A  Y  +AL+
Sbjct: 42  DGMAAQSEGEYAEALENYREALALEQGEEDRSYILYNMGLIYQSNGELDKALEYYHQALE 101

Query: 183 ISPDAPWV--TEAVV-----QQYVLAKEWSRAITFLNQKKK 216
           ++P         AV+     +  + A +   A    N+  +
Sbjct: 102 LNPRLCSALNNIAVLLHHKGELSLQAGDEETAEALFNEAAQ 142


>gi|297154408|gb|ADI04120.1| NADPH-dependent FMN reductase [Streptomyces bingchenggensis BCW-1]
          Length = 377

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 40/115 (34%), Gaps = 10/115 (8%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
           A  W  A++  + K++      R        R+    +      +    ++ ++      
Sbjct: 252 ADRWVTALSLFDDKEREETTAERWE------RAGLYFEAKQYAEAARLLVQVVEEAPEQT 305

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
              +  A++     +  +AE  L ++   +P       Y HL+   T+ +  RA 
Sbjct: 306 APRLLLARAYYHSAQLSRAEEQLREVIARDP----VEHYAHLMLGRTLQRQGRAE 356


>gi|302141751|emb|CBI18954.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 7/103 (6%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFES----CRIGDLNSAQRYATK 179
                A+        K    L    T    +     L+ +       IGD  +A + AT+
Sbjct: 29  ADSFQAQGDKLAEGGKYREALGKWETALTLMPGKAVLHEQKAQVLLEIGDAWNALKAATR 88

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           A ++ P        + +  +   E   AI   ++         
Sbjct: 89  ATELEPSWAEAWITLGRAQLNFGEPDIAIKSFDRALAIKPNSE 131


>gi|107027475|ref|YP_624986.1| serine/threonine protein kinase [Burkholderia cenocepacia AU 1054]
 gi|116693813|ref|YP_839346.1| serine/threonine protein kinase [Burkholderia cenocepacia HI2424]
 gi|105896849|gb|ABF80013.1| serine/threonine protein kinase [Burkholderia cenocepacia AU 1054]
 gi|116651813|gb|ABK12453.1| serine/threonine protein kinase [Burkholderia cenocepacia HI2424]
          Length = 1349

 Score = 37.2 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/162 (8%), Positives = 42/162 (25%), Gaps = 6/162 (3%)

Query: 101  PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH---EKLEMMLQIPATREFAV 157
             +AR+     +         +  +   +        + A    E +  +      R    
Sbjct: 1164 AMAREAVYCATCLDHLPTLGVTMMYLARTHQLAGDRDAARAVSEAILRLADAHRLRAVGH 1223

Query: 158  YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
            Y+    +    D      +  A +         +    + +      ++  A+  + +  
Sbjct: 1224 YAAIIHAWTQRDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAERGDYDAALAQIGECL 1283

Query: 216  K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                    R     L+ +  E   + D       A+++ +  
Sbjct: 1284 AWCESSGERYYEAQLLLKQGEYLRRADPRCGGVAALDACRRA 1325


>gi|330446666|ref|ZP_08310318.1| putative uncharacterized protein VP0806 [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328490857|dbj|GAA04815.1| putative uncharacterized protein VP0806 [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 284

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 2/99 (2%)

Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
            +      + +++    L    +L           + +++  +E    D+A         
Sbjct: 117 ALKQALVLVDNKDYAQALPLLRQLAATQPNDSLVNLAIAECLIETALFDEAEPILAAIPM 176

Query: 354 IAPRKEIFLLLAQIE-QANSHNTDKILYWTQSALHAMPD 391
                    L+A++E    + N+ +I    +  L A PD
Sbjct: 177 QDQDAHYKSLVARLELHKQAGNSPEIQQ-LEQKLAAAPD 214


>gi|330919036|ref|XP_003298446.1| hypothetical protein PTT_09180 [Pyrenophora teres f. teres 0-1]
 gi|311328335|gb|EFQ93458.1| hypothetical protein PTT_09180 [Pyrenophora teres f. teres 0-1]
          Length = 683

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 92/274 (33%), Gaps = 34/274 (12%)

Query: 137 NIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDLN--------SAQRYATKALDISPD 186
             A    +  L   P ++   ++  +    +  GD +          + +  + +  +P 
Sbjct: 259 ERARAIYKFALDRMPRSKSVNLHKAFTTFEKQYGDRDGIEDVILSKRRVHYEEQVKENPK 318

Query: 187 A--PWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENAD 238
               W+  A +++    ++  R      +        +  + W R   + L     E   
Sbjct: 319 NYDAWIDFARLEETSSNQD--RVRDIYERAIAQIPPTQEKRHWRRYIYLWLFYAVYEETV 376

Query: 239 KGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
             D+  +     E ++L            +  A   + Q +   A  +L +   + P  +
Sbjct: 377 SRDIERTRQIYQECIRLLPHKRFTFAKVWLMFAHFEVRQGQLTTARKLLGQSLGMCPKDK 436

Query: 295 IANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAML 350
           +   Y  L  E  + +  R  +L     E N  + ++ +  +++   +  +D+A A   L
Sbjct: 437 LFKGYIEL--EMKLFEFNRCRQLYTKYIEWNGSNSQTWIKFAELERGLDDLDRARAIFEL 494

Query: 351 AMKI---APRKEIFLLLAQIEQANSH-NTDKILY 380
           A++       + ++      E+     +  + LY
Sbjct: 495 AVEEPQLDMPELVWKSYIDFEEGEGEYDRTRALY 528


>gi|293604160|ref|ZP_06686568.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292817385|gb|EFF76458.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 919

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 4/102 (3%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEW 221
           + GD  +A R A +A  I P         +       ++++A   +++       N K+ 
Sbjct: 158 KRGDYPAAARGAEQAFRIDPKQGAWAMLWLDSLEAQNQYAQAEAAIDKAIALGAPNKKDL 217

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
              R  +    + + AD      S + A +++     ++ A+
Sbjct: 218 AARRQTMQARMAAKQADAAYQALSDNRAHDAVPFARQAVAAA 259


>gi|284053746|ref|ZP_06383956.1| TPR domain-containing protein [Arthrospira platensis str. Paraca]
          Length = 613

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             D  +A     +A+++ P+     +   +     K +  AI   N   +      RN  
Sbjct: 437 QEDYLAALESVARAIELDPNLAQAWQNRGRILASLKRFEEAIAAYNMAVEKG----RNNP 492

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L  +RS+   +      +   A E++ L  +          +LI+    + A    ++ 
Sbjct: 493 ELWSSRSVALWEAQQYAEAVISAKEAVILNPDFFQGWYNMGTALIALENYQDALFAYQQA 552

Query: 287 WKVNPHPEIANIYT 300
            ++   PE AN + 
Sbjct: 553 TRIQ--PENANAWA 564


>gi|312195347|ref|YP_004015408.1| sigma-70 region 2 domain protein [Frankia sp. EuI1c]
 gi|311226683|gb|ADP79538.1| sigma-70 region 2 domain protein [Frankia sp. EuI1c]
          Length = 957

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 61/220 (27%), Gaps = 37/220 (16%)

Query: 127 VQIALAERQYNIAHEKL--------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178
            +    +     A E              +         ++L       GD  SA+    
Sbjct: 689 ARALRYQGDTRTAREIFSDVLDRARRAFGEDDPDVLVTAHNLASTLAAEGDHESAREMFE 748

Query: 179 KALD-----ISPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEW--NRNRAIL 228
             L      + PD P          V    A +WS A   L       +    N +   L
Sbjct: 749 DVLARARRVLGPDHPATLTTTHYLAVVMHAAGDWSGAHVILEDLLPRRRRVLGNDDPRTL 808

Query: 229 LIARSLENADKGDMIASYHDAIESLKLC----------DNSIMASICAAKSLISQNKKRK 278
             A +L +  +     +   A+ S  L            +++ A+   A  L  +    +
Sbjct: 809 ATAHALASVARERGDYAAAQAMFSDLLARRRRRFGADDPSALKAAHNVASVLRVRGDLAE 868

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
           A  + E         ++    T +L E+ V  L     L 
Sbjct: 869 ARGLFE---------DLLRRRTRVLGEDHVDTLTTRYELA 899


>gi|226294429|gb|EEH49849.1| DnaJ and TPR domain-containing protein [Paracoccidioides
           brasiliensis Pb18]
          Length = 523

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 7/167 (4%)

Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  L       A    +  +         +           +G    A 
Sbjct: 29  DTPLSSLISTAKTHLKNGAPQDALPYFDAAISRDPANYLTIFQRG--ATYLSLGKSAKAL 86

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIAR 232
           +   + L I PD         +  + + +W+ A   L    KN        + A      
Sbjct: 87  QDFNEVLKIKPDFEGALLQRARLNMKSADWAAAKKDLVAAGKNTAAEIAELDEAQGAARL 146

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           +     KGD  A    +  ++     S+      A     + + ++A
Sbjct: 147 AQAAEKKGDWEACVSQSGVAILKAPQSLPLRQLRAHCRFERGEIQEA 193


>gi|169600429|ref|XP_001793637.1| hypothetical protein SNOG_03048 [Phaeosphaeria nodorum SN15]
 gi|111068659|gb|EAT89779.1| hypothetical protein SNOG_03048 [Phaeosphaeria nodorum SN15]
          Length = 932

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 15/199 (7%)

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
            W+T+A  +      + + A + +        + + +R  + +  +   + +G    +  
Sbjct: 496 EWLTQA--EICEEEGDKATAASIVKTTIGWGLDEDDDRRDVWLEDAKGVSSRGRYETARA 553

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLL--- 303
               ++ +   S      +A+             +L++     P+ E +  +Y   +   
Sbjct: 554 ILGHAVSIFPYSTTVWHASAELEKHHGSTESLLSVLDRAVNACPNSESLWLLYAREMWAS 613

Query: 304 --SENTVGKLKR-ALRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKE 359
              E     L R   +L      + E+L   +  + ++ G+ +QA +    A + A    
Sbjct: 614 GDPEGARQVLGRSFGQL----PGN-ENLYTRAVDLEVDAGNYEQARSFLQAARESAATDR 668

Query: 360 IFLLLAQIEQANSHNTDKI 378
           IF+  A +E+   +  D I
Sbjct: 669 IFMKSAVLERQLGNYEDAI 687



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 93/262 (35%), Gaps = 35/262 (13%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD   A++   ++    P    +    V   V A  + +A +FL   +++A   
Sbjct: 608 REMWASGDPEGARQVLGRSFGQLPGNENLYTRAVDLEVDAGNYEQARSFLQAARESAATD 667

Query: 222 NRNRAILLIARSLENADKG-------------------------DMIASYHDAIESL--- 253
                  ++ R L N +                           + ++   +A E+    
Sbjct: 668 RIFMKSAVLERQLGNYEDAIDICNQGLQNWPGSWKLHAVKGQIYEQLSKLKEAQEAFNIG 727

Query: 254 -KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKL 311
            +    S +  I  ++    Q    KA   L++  + NP +P++  +   +  E     +
Sbjct: 728 TRAAPKSPILYILLSRIQEKQGAVVKARSTLDRGRQANPKNPDL--LCEAVRLERRQNNI 785

Query: 312 KRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQ 369
             A ++     +E   S ++ ++  + + S  Q   +A+ A+K      ++F+++ +I  
Sbjct: 786 PAAQKVMATALQECPNSGLLWAEKIMHLESRTQRKPRALEAIKKVEKDPQLFVVVGRIFW 845

Query: 370 ANSHNTDKILYWTQSALHAMPD 391
           A          W   A+   PD
Sbjct: 846 AERRLDKAA-TWFTKAVVLDPD 866


>gi|16660625|gb|AAL27611.1|AF430345_4 putative methyltransferase CheR3 [Pseudomonas putida]
          Length = 424

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 20/58 (34%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             GD   A  +  KAL + P  P     +        + + A    ++  +  +E  R
Sbjct: 367 TEGDAQQALTHYRKALYLEPQHPEALVHLAALLASQGDLAGARRLQDRAARVGREPER 424


>gi|83312955|ref|YP_423219.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
 gi|82947796|dbj|BAE52660.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
          Length = 304

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 32/242 (13%)

Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ 213
           LY E+       +   A +   +     P + W T+A +          ++  AI  L++
Sbjct: 42  LYNEAMDLVDANEYYKAAQLFDEVDRQHPYSVWATKAQLMSAYALYERNKYDDAIVALDR 101

Query: 214 KKKNAKEWNRNRAILLIARSLENADK-GDMIASYHDAIESLKLCD---NSIMASICA--A 267
                   N++ A     + L   ++  D+        ++LK+     +   ++  A  A
Sbjct: 102 -FIQLHPGNKSIAYGYYLKGLCYYEQITDVARDQKLTEQALKIMQEVVDRFPSTPYARDA 160

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVE 326
           +  I   +   A   +           I   Y HL      + + K      +      E
Sbjct: 161 RLKIDLARDHLAGKEM----------NIGRYYQHLEHHLAALNRFKVVAEQYQTTTHVPE 210

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP----RKEIFLLLAQIEQANSHNTDKI-LYW 381
           +L  + +I   +G   +A   A +     P     ++ +   A +E+ N + T +   +W
Sbjct: 211 ALYRMVEIYTALGLDQEAARAAAVLGHNFPGSDWYEDAY---AMVEKGNLNPTGRSKKHW 267

Query: 382 TQ 383
           T 
Sbjct: 268 TD 269


>gi|296124041|ref|YP_003631819.1| hypothetical protein Plim_3808 [Planctomyces limnophilus DSM 3776]
 gi|296016381|gb|ADG69620.1| hypothetical protein Plim_3808 [Planctomyces limnophilus DSM 3776]
          Length = 361

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 11/96 (11%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWN---RNRAILLIARSLENADKGDMIASYHDAIESLK-- 254
            A  + +AI  L++ K + K  +   +      +AR+     +        DAI+ LK  
Sbjct: 96  AAGRFDKAIEALSKLKSDGKFPSDNVKKEIGYTLARAKGLLAQTQPSKV-DDAIKELKGI 154

Query: 255 --LCDNS---IMASICAAKSLISQNKKRKAEVILEK 285
                +      + I  A  L+++    +A  +LE 
Sbjct: 155 QASDPDFYQFFPSVILLADLLVNKGSFDEAAKVLES 190


>gi|166368944|ref|YP_001661217.1| tetratricopeptide protein [Microcystis aeruginosa NIES-843]
 gi|166091317|dbj|BAG06025.1| tetratricopeptide protein [Microcystis aeruginosa NIES-843]
          Length = 394

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 21/205 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATREFAV 157
           +  LA +M   +  ++    E ++  L  Q +  E +    A +                
Sbjct: 195 DPTLAGQMAEQLGIEN-KDAESIIDSLIAQFSPQEGKNPETAEDWFN------------- 240

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  E   +G+ ++A     +AL I+P              +   +  A+   ++  + 
Sbjct: 241 QGL--EQANLGNWSNAIADWEQALTINPQLASAWHNRGGALAMIGNYEEALNSYDRALEI 298

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
               N ++ I     +L    +     +     + L+  DN   A      +L +  + +
Sbjct: 299 TP--NDHQVINARGSALYGLQRWQ--EALECWQQVLEADDNFYQAWYNRGSTLENLGETQ 354

Query: 278 KAEVILEKIWKVNPHPEIANIYTHL 302
            A    +K   + P  E+A      
Sbjct: 355 AAIACYQKALGIAPDFELAQTRLEA 379


>gi|119495949|ref|XP_001264749.1| cell cycle control protein (Cwf4), putative [Neosartorya fischeri
           NRRL 181]
 gi|119412911|gb|EAW22852.1| cell cycle control protein (Cwf4), putative [Neosartorya fischeri
           NRRL 181]
          Length = 675

 Score = 37.2 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 90/276 (32%), Gaps = 34/276 (12%)

Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  + ++P ++  A++  Y    +  GD              +Y  + L 
Sbjct: 257 KEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLEN 236
            +P    V     +    + +  R      +        +  + W R   + +     E 
Sbjct: 316 ENPRNYDVWFDFARLEETSGDPDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEE 375

Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292
            +  D+  +     E LKL            +  A+  I Q   + +   L +   + P 
Sbjct: 376 MEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQASRKTLGQAIGMCPK 435

Query: 293 PEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKA 348
            ++   Y  L  E  + +  R   L E     N  + +S +  +++   +   ++A A  
Sbjct: 436 DKLFRGYIDL--ERQLFEFVRCRTLYEKQIEWNPSNSQSWIKYAELERGLDDSERARAIF 493

Query: 349 MLAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380
            L +   P     + ++      E+      D++  
Sbjct: 494 ELGIDQ-PTLDMPELVWKAYIDFEEYE-GEYDRVRQ 527


>gi|318060681|ref|ZP_07979404.1| hypothetical protein SSA3_22253 [Streptomyces sp. SA3_actG]
 gi|318078219|ref|ZP_07985551.1| hypothetical protein SSA3_16247 [Streptomyces sp. SA3_actF]
          Length = 114

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 8/84 (9%), Positives = 27/84 (32%), Gaps = 3/84 (3%)

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A ++       T  ++     L         + +++++       + +A  +    +   
Sbjct: 18  AGMFFDAKEYTTAVRI--LRGLVAEAPGHTAARLLLARAYYHSAQLGRAETELRAILDRD 75

Query: 356 PRKEIFLLLA-QIEQANSHNTDKI 378
           P +    LL  +  +    +T+  
Sbjct: 76  PVESYATLLLGRTLERQGRDTEAA 99


>gi|196248655|ref|ZP_03147355.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
 gi|196211531|gb|EDY06290.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
          Length = 418

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 80/281 (28%), Gaps = 55/281 (19%)

Query: 124 LLEVQIALAER----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           LL   +   +           +  +     P  +      L      +G+   +  +   
Sbjct: 104 LLAADLYEMQGLTEVSERKLRQAYKKAPDEPVVQFA----LAELYFSLGEYAKSVPFYE- 158

Query: 180 ALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234
              +      +   ++     +    + E+  A+ +  +      +        L A   
Sbjct: 159 --QVQKSTREMAGVLLVERLAEALTRSGEFEAALPYYEEALNEKTDSR-----TLFAYGF 211

Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294
                G    +        +L  +     +  AK+   + + RK+               
Sbjct: 212 TALQAGYAQTAIDKLSALKELDPDYAPLYLYLAKAYEQEGQLRKSY-------------- 257

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
                     E  +  +K       I++ + E  + + K+AL++   D+A  +   A++I
Sbjct: 258 ----------ETALEGIK-------IDEWNKELRLYIGKLALKLNKPDEAEEQLKKALEI 300

Query: 355 A-PRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPL 393
                E   +L+ +        D +    + A+     DP 
Sbjct: 301 DGGYIEALTVLSALWLHEQRYEDVV-ALLERAMADGEYDPQ 340


>gi|116253868|ref|YP_769706.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258516|emb|CAK09620.1| putative TPR repeat family protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 289

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 11/137 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q   A   ++ A +     L     R +    L ++     D   A    +KA+ ++P
Sbjct: 151 AGQDNQAFNDFDKAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++          Y+   +   A    N    +A E N N A     ++L    +GD   +
Sbjct: 204 NSAEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259

Query: 246 YHDAIESLKLCDNSIMA 262
                 ++ L      A
Sbjct: 260 ARSYRHAIGLDPKYQPA 276


>gi|157864179|ref|XP_001680802.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68124094|emb|CAJ02076.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 1184

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 86   KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL-AERQYNIAHEKLE 144
            +AL  G   +   ++  A +  + V + H  ++          IA   E+ Y  A +   
Sbjct: 1063 EALTRGWALLRRGDVAAAHRAWTAVCRVHGTNDVMGTKA-HAYIAEAIEKDYAAAAQWYA 1121

Query: 145  MMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
              LQ  P  R  A  Y +  E+        A +   +A  +        +AV       
Sbjct: 1122 RSLQLDPQDRMTAYNYGVLLEALLDK-PQEALQLYDRAAAL-------GDAVAGARARE 1172


>gi|89053481|ref|YP_508932.1| tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
 gi|88863030|gb|ABD53907.1| Tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
          Length = 281

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 11/147 (7%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF-ESCRIGDLNSAQRYATKALDI 183
           LE  IA ++  ++ A    E    +  TR   VY+ +       GD   A+    +A+  
Sbjct: 143 LEAMIADSDEDWDRADSFYETAAGLT-TRPANVYNNWGYSHLTRGDFPGAEDLFVRAISY 201

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            PD       +V        +  A+  +N  +         RA LL   +L    +GD+ 
Sbjct: 202 DPDLFTAKNNLVLARSAQGNY--ALPLINMTQI-------ERAQLLHTAALSAIRRGDID 252

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSL 270
                  E++        A++ A ++L
Sbjct: 253 EGRGLLNEAIDTHPQHFEAAVEALRAL 279


>gi|307546467|ref|YP_003898946.1| thioredoxin [Halomonas elongata DSM 2581]
 gi|307218491|emb|CBV43761.1| K05838 putative thioredoxin [Halomonas elongata DSM 2581]
          Length = 404

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 30/110 (27%), Gaps = 19/110 (17%)

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM---K 353
                L + ++    +    L +   +     V +++  +  G   QA           +
Sbjct: 244 QASAALEAGDSATARRIYEELVQQWPDHTAYQVELARALVADGEPQQARQLLEALPPEER 303

Query: 354 IAPRKEIFLLLAQIEQANSH------------NTDKILYWTQSALHAMPD 391
            AP        A IE                 +  +  Y  Q AL  + D
Sbjct: 304 DAPSARGVR--ASIEFGEQALSAEEIAALGDRDDSEARY--QRALRQVAD 349


>gi|306816493|ref|ZP_07450625.1| lipoprotein NlpI [Escherichia coli NC101]
 gi|305850058|gb|EFM50517.1| lipoprotein NlpI [Escherichia coli NC101]
          Length = 294

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYCGRDKLAQDDLLAFYQD 159


>gi|262199988|ref|YP_003271197.1| hypothetical protein Hoch_6840 [Haliangium ochraceum DSM 14365]
 gi|262083335|gb|ACY19304.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 370

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 72/240 (30%), Gaps = 23/240 (9%)

Query: 57  LLFAVSRFFLSCPAMLFH--MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114
             +   R  LS    L     LH+  +D GY+ L  G  + A      A  +   V  + 
Sbjct: 68  FAWDGDRTLLSAAGTLARCLGLHQGRFDDGYQVLDQG--AAAHG----ATAVLEVVRSEL 121

Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLN 171
               E    L E + A        A E      +  A R      L+ E       G++ 
Sbjct: 122 LLAQE---RLDEAREA-----AEGALEAPGSETEHRAARLTLARVLHGEGMACADAGEME 173

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
            A     + + +          +          +RA+    +  +   +     AI    
Sbjct: 174 RAMFLFRQTIHLDDTWARPQVNLGVVLTRLGMHARAMASFERALELEPD----NAIAFEN 229

Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           R L     GD+  +  D   +++L   S  A +        +   R A  +L    +  P
Sbjct: 230 RGLLRQASGDIQGACADLGRAIELEPGSRNAVLSLVAIHRERGDIRAAASVLADAIEAQP 289


>gi|219852380|ref|YP_002466812.1| TPR repeat-containing protein [Methanosphaerula palustris E1-9c]
 gi|219546639|gb|ACL17089.1| TPR repeat-containing protein [Methanosphaerula palustris E1-9c]
          Length = 467

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 8/162 (4%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APW 189
              Q+  A      +L I  T   A+Y+      R G+L+ A  +  +   ++PD    W
Sbjct: 123 MAGQHEEALLCFNEVLTIEPTDTAALYAGAECLERTGELSEAVLWYQELHTLAPDEENAW 182

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
           + E      +   +   A+   +    +  +    RA+L  A++   A++GD   ++   
Sbjct: 183 LREGYDLIRLKQVD--LAVACFDHLLSS--DGGNQRALL--AKAFCLAERGDPDQAFLVY 236

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
            + L    +   A +            ++A   +E + + +P
Sbjct: 237 DQILLTDPDCEEAWLEKGTLCKKTGNHQEALRCIEMVLEEHP 278


>gi|192361111|ref|YP_001983630.1| tetratricopeptide repeat domain-containing protein [Cellvibrio
           japonicus Ueda107]
 gi|190687276|gb|ACE84954.1| tetratricopeptide repeat domain protein [Cellvibrio japonicus
           Ueda107]
          Length = 758

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 25/193 (12%)

Query: 211 LNQKKKNAKEWNRNRAILLI---------ARSLENADKGDMIAS-YHDAIES-LKLCDNS 259
           L+++   +      RA L+          A+ L  A  G   A+    AIE+   L    
Sbjct: 468 LSEQLARSDLPALRRAALIAELPAYPSAGAQRLLQAALGHADAAVRRAAIEASAALDPGL 527

Query: 260 IMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318
                  A+     N   +A  I     W +     +A+ Y   L   + G+     +++
Sbjct: 528 -----LEARLAELINDPFRAVRITAAGHWLM-----LADQYGASLPPESFGE---YEQVQ 574

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
                + E+   ++ +    G   Q  A    A++  P     ++     +    +    
Sbjct: 575 AQLPANAEAHFNLANLYRLTGRAGQVEAALQTALQRDPAFAPAVVSLAQWREQHGDPAAA 634

Query: 379 LYWTQSALHAMPD 391
               + +L A P 
Sbjct: 635 RRLLEDSLRAYPG 647



 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 61/229 (26%), Gaps = 42/229 (18%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-------QQYVLAKEW--- 204
                L   +    D    +     +  + P       A +        +   A  W   
Sbjct: 495 AGAQRLLQAALGHADAAVRRAAIEASAALDPGLLEARLAELINDPFRAVRITAAGHWLML 554

Query: 205 ------------SRAITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAI 250
                             +  +     E + N A L  L  R+      G + A+   A+
Sbjct: 555 ADQYGASLPPESFGEYEQVQAQLPANAEAHFNLANLYRLTGRA------GQVEAALQTAL 608

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS- 304
           +          A +  A+          A  +LE   +  P     H  +   +      
Sbjct: 609 Q---RDPAFAPAVVSLAQWREQHGDPAAARRLLEDSLRAYPGDAGLHHALGLAHIRARQV 665

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
              V  L++A  LE    ++     +++    + G  +QA       ++
Sbjct: 666 GTGVHALEQAHTLE---PDNDTYAYVLAVAWHDTGKREQALQLLREQLQ 711


>gi|159901659|ref|YP_001547905.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894698|gb|ABX07777.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 1105

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 91/270 (33%), Gaps = 46/270 (17%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVY----------SLYFESCRIGDLNSAQRY 176
             +  ++ +Y+ A    E  L++  T                +L     R G  + AQ  
Sbjct: 712 ASVLESQGRYSEARGLYERALEV--TEAVLGREHPDTARSVNNLASVLARQGRYSEAQPL 769

Query: 177 ATKALD-----ISPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEW----NRN 224
             +AL      +  + P    +V            +S A     Q     +      + +
Sbjct: 770 YEQALAVNEAVLGREHPDTARSVNNLASVLESQGRYSEAQPLYEQALAVREAVLGENHPD 829

Query: 225 RAILLIARSLENADKGDMIASY------HDAIESLKLC--DNSIMASICAAKSLISQNKK 276
            A+ +   ++   ++G    +           E++      ++ M+    A  L SQ + 
Sbjct: 830 TAMSMNNLAMVLLNQGRYSEAQGLLERTLTVHEAVLGAEHPDTAMSVNNLAVVLESQGRY 889

Query: 277 RKAEVILEKIWKV------NPHPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLV 329
            +A+ +LE+   V        HP+ A    +L     + G+   A RL        E  +
Sbjct: 890 SEAQGLLERALAVREAVLGAEHPDTAMSVNNLAGVLESQGRYGDAQRL-------YERAL 942

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           +V++  L     + A +   LAM +  ++ 
Sbjct: 943 VVTEAVLGAEHPNTARSMNNLAMVLLNQRR 972


>gi|111219562|ref|YP_710356.1| putative adenylate cyclase [Frankia alni ACN14a]
 gi|111147094|emb|CAJ58740.1| putative adenylate cyclase [Frankia alni ACN14a]
          Length = 1067

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 82/258 (31%), Gaps = 60/258 (23%)

Query: 166 RIGDLNSAQRYATKALDISP-----------DAPWVTEAVVQQYVLAKEWSRAITFL--- 211
           R GD   A +   +A+ + P           D  W   +          +S A   L   
Sbjct: 662 RQGDETGAAQLLKRAITLLPETDPLRLRAEIDLGWALYSF-------GRFSDAERILRQV 714

Query: 212 -NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI-----MASIC 265
             + ++  ++  R  A L   R L + D   ++A      E+     N +     + +  
Sbjct: 715 TERARRAGEDGLRAHARLAHLRVLFSTDPEGLVA--TTLTEAAASLANFVRSGDDVGAAL 772

Query: 266 A----AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321
           A    A + ++  +   AE  +E   +      +      L  E T+        L    
Sbjct: 773 ACRSQANAYLAAGQFAAAERAMENAVRHAEESGVPRAAQSLRRELTL--------LTSWG 824

Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381
              V S +  +  AL+    D+A  +A+LA        +   +       S + +     
Sbjct: 825 PRPVASSLARAGEALDAAGDDRALRRALLAQLA-----VLTAM-------SGDLEGARIH 872

Query: 382 TQSA------LHAMP-DP 392
            ++A      L A   DP
Sbjct: 873 LKAAEEIVHDLRAPRADP 890


>gi|94984547|ref|YP_603911.1| SARP family transcriptional regulator [Deinococcus geothermalis DSM
           11300]
 gi|94554828|gb|ABF44742.1| transcriptional regulator, SARP family [Deinococcus geothermalis
           DSM 11300]
          Length = 630

 Score = 37.2 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 70/219 (31%), Gaps = 24/219 (10%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-------YVLAKEWSRAITFLNQ--KKK 216
           + GDL  AQ    +AL + P+      A +          VL  +++ A   L Q  +  
Sbjct: 155 QTGDLTRAQHLYGEALRLLPEGR-TPIARLSALTGLASVQVLTGDFAGARNTLAQGWQTL 213

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIAS------YHDAIESLKLCDNSIMASICAAKSL 270
              +    RA LL   +  +   GD  A           +E L+  +     +   A   
Sbjct: 214 EQTDALTPRAYLLTVEAELHHLTGDQAAQLRTLQDLRALVEGLRDFELLTWTATRLADLY 273

Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-----TVGKLKRALRLEEINKESV 325
             Q +  +A   L  +     HP +      LL            L RAL    + ++  
Sbjct: 274 SRQGEHSRALESLLDLAPDAGHPAVTMTRGVLLRRRQQHAQAAEYLGRALATAGLGEQQR 333

Query: 326 ES---LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
                 +  ++ AL  G       +  LA  I  R  + 
Sbjct: 334 VRALLHLAEAQAALGDGVASLYSLREALAALIRARDRML 372


>gi|240254442|ref|NP_178674.6| ELF8 (EARLY FLOWERING 8); binding [Arabidopsis thaliana]
 gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION INDEPENDENCE 6 [Arabidopsis thaliana]
 gi|330250911|gb|AEC06005.1| protein early flowering 8 [Arabidopsis thaliana]
          Length = 1091

 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 98/282 (34%), Gaps = 16/282 (5%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           +  G + +A   I  A +    V      +   L  L +  +     +++ + +  +  L
Sbjct: 132 VGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPAL--LGQASVEFNRGRFSESLQLYKRAL 189

Query: 148 QIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
           Q+      AV   +     ++G L+ A++   + L + PD      A+    + A +   
Sbjct: 190 QVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIMDLQANDSIG 249

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGD---MIASYHDAIESLKLCDNSIMAS 263
               +++ ++  + +    A  L   +      G    +      A+           + 
Sbjct: 250 MRKGMDRMQQAFEIYPY-CASALNYLANHFFFTGQHFLVEQLTETALAVTTHGPTKSHSF 308

Query: 264 ICAAKSLISQNKKRKA----EVILEKIWKVNPH----PEIANIYTHLLSENTVGKLKRAL 315
              A+S  S+    KA       +++    NPH    P        L      G +    
Sbjct: 309 YNLARSYHSKGDFEKAGMYYMAAIKET-NNNPHEFVFPYFGLGQVQLKLGELKGSVFNFE 367

Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           ++ E+  ++ E+L  +  +  ++G  ++A      A K+ PR
Sbjct: 368 KVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPR 409


>gi|166365260|ref|YP_001657533.1| hypothetical protein MAE_25190 [Microcystis aeruginosa NIES-843]
 gi|166087633|dbj|BAG02341.1| hypothetical protein MAE_25190 [Microcystis aeruginosa NIES-843]
          Length = 276

 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 4/97 (4%)

Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK- 358
           T L   +    ++   +L ++N +  + L+++++   ++     A A     +   P++ 
Sbjct: 81  TRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYAGATASYRALLASHPQEL 140

Query: 359 EIFLLLAQIEQANSHNTDK---ILYWTQSALHAMPDP 392
                L  +  + +   +    +      AL A  DP
Sbjct: 141 RALTGLTNLFLSQNRPIEAISLVKDTLDRALKAAADP 177


>gi|32476483|ref|NP_869477.1| TPR repeat-containing O-linked GlcNAc transferase [Rhodopirellula
           baltica SH 1]
 gi|32447028|emb|CAD78934.1| similar to O-linked GlcNAc transferase-putativeTPR repeat
           containing protein [Rhodopirellula baltica SH 1]
          Length = 329

 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 4/99 (4%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
              L       G  + A          +P        + + Y    E   A+ +L    +
Sbjct: 185 HRGLAVLLVDSGRPDRAFTLLKNWAAQNPALAEPRIELARLYEEHGEPQTALKYLEDAVQ 244

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             ++ N  RA L +AR  E     D + +  +   +L L
Sbjct: 245 --QDANNARAWLALARLRE--ASNDPVQALQNYQRALAL 279


>gi|321263865|ref|XP_003196650.1| general transcriptional repressor [Cryptococcus gattii WM276]
 gi|317463127|gb|ADV24863.1| General transcriptional repressor, putative [Cryptococcus gattii
           WM276]
          Length = 1105

 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 1/95 (1%)

Query: 97  AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156
           +     A++    +  Q    NE   ++L   +A      + A    E  L+   +    
Sbjct: 102 SSEARAAKEKMDSILAQLAAANEN-TWMLIGAVAEGMNDQDRALSAFENALRHNPSSVLG 160

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           + ++   +    D + A  Y  + L+ +P+   V 
Sbjct: 161 LNAVASIARGRDDFDKAIEYFQRILNANPENGEVW 195


>gi|302764728|ref|XP_002965785.1| hypothetical protein SELMODRAFT_61158 [Selaginella moellendorffii]
 gi|300166599|gb|EFJ33205.1| hypothetical protein SELMODRAFT_61158 [Selaginella moellendorffii]
          Length = 759

 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 212 NQKKKNAKEWNR-----NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
            +  K    + R      RA L +  +  +A +G+++ +   A+++L +   S MA +  
Sbjct: 676 TRNLKEQVNFARFTGTQARASLYVNFAAIHAMQGELLQARQCALQALAIAPGSSMAVLAM 735

Query: 267 AKSLISQNKKRKAEVILEK 285
               +SQ + ++A  +L++
Sbjct: 736 VYVELSQGRTKEAVTMLKR 754


>gi|260462345|ref|ZP_05810553.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
 gi|259031839|gb|EEW33107.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
          Length = 554

 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 56/136 (41%), Gaps = 6/136 (4%)

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
           D   A R   +A++ +P  P     + + ++   E S AI       +   +W    A+ 
Sbjct: 88  DDEMAIRCFERAVNEAPRNPHYQLTLGEAHLKVGEHSDAIRHFELACELKADW--VEALC 145

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
            + R+     K DM    ++  ++L++        +  A +L+S  +  +A   +++   
Sbjct: 146 ALGRAYTEFGKADMAVPRYE--KALEIDSGHSAIRMGLANALVSLGRMEEATDYMKEAIG 203

Query: 289 VNPHPEIANIYTHLLS 304
                +IA+ Y  L+S
Sbjct: 204 HRQ--DIASAYNGLVS 217


>gi|77164039|ref|YP_342564.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
 gi|254435990|ref|ZP_05049497.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani
           AFC27]
 gi|76882353|gb|ABA57034.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
 gi|207089101|gb|EDZ66373.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani
           AFC27]
          Length = 581

 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 70/171 (40%), Gaps = 12/171 (7%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLEM 145
           L  G + I A     A  M  Y +  H+  ++    LL  +   A    + +IA + L+ 
Sbjct: 404 LAEGEILINAGRYEEA--MSHYDNALHSRPDD--TNLLYARALVAENLGRLDIAEQDLQR 459

Query: 146 MLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
           ++ +  +   A+ +L Y  + R   L  A RY ++A+ + P+  ++ +++   +     +
Sbjct: 460 VITLEPSNAEALNALGYTLADRTRRLEEALRYISRAMRLKPNNAFILDSMGWVHYRLGNY 519

Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
            +A  +L +  +  K+       +          KGD   +      +LK+
Sbjct: 520 DKAEKYLREAMELRKDPE-----IAAHLGEVLWAKGDREGARQVWQHTLKM 565


>gi|302772172|ref|XP_002969504.1| hypothetical protein SELMODRAFT_410232 [Selaginella moellendorffii]
 gi|300162980|gb|EFJ29592.1| hypothetical protein SELMODRAFT_410232 [Selaginella moellendorffii]
          Length = 354

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 6/136 (4%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           ++ ++ L   ++    A      E+LK   + + A   AA S     +  KA+  LEK+ 
Sbjct: 109 VVASKRLRPQEEEKFKAELQKFEEALKNSPDDLSALEGAAVSYAELGEYAKAQTNLEKLI 168

Query: 288 KVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           +++P        +A + + L          R   ++     S+E L+ +++  ++     
Sbjct: 169 RMSPSNVEALRLLAEVKSSLNDFEGSSNAYR-QAIKASGSTSMELLLGLTEALIDANKPG 227

Query: 343 QAHAKAMLAMKIAPRK 358
           +A  + + A +     
Sbjct: 228 EAVDELLRAKETTKTA 243


>gi|299533875|ref|ZP_07047242.1| Tetratricopeptide TPR_2 [Comamonas testosteroni S44]
 gi|298718159|gb|EFI59149.1| Tetratricopeptide TPR_2 [Comamonas testosteroni S44]
          Length = 187

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 13/137 (9%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A   L    + P  R   +  +       G    A     +  +  P+ P     +  
Sbjct: 47  QKADTYLAKNSRDPQMRF--LRGIAL--SNDGKTEDAIAAFRQLTEDYPELPEPYNNLAV 102

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNR-------AILLIARSLENADKGDMIASYHDA 249
            Y    +  RA   L    +N   +           A L      ++  KG   A+ +  
Sbjct: 103 IYARQGDLDRARAALEAAVRNNPNYAVAHENLGDIYARLAYQSYAQSLAKGGRPAALNPK 162

Query: 250 IESLKLCDNSIMASICA 266
           ++ LK  D    A+  A
Sbjct: 163 LKQLK--DLLQPAASLA 177


>gi|281344726|gb|EFB20310.1| hypothetical protein PANDA_002336 [Ailuropoda melanoleuca]
          Length = 465

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 17/145 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +   +G     ++Y  +AL       +V     + Y       +A+  L    +   
Sbjct: 215 LALKLQDLGQEAEGEKYIEEALTNMSSQTYVFRYAAKFYRRKGSLDKALQLLKTALRATP 274

Query: 220 EWN-RNRAILLIARSLENA------------DKGDMIASYHDAIE----SLKLCDNSIMA 262
                +  I L  R+                D+ ++      A+     +L+      +A
Sbjct: 275 SSTFLHHQIGLCYRAQMIEIKRAANWQPRGKDRENVDRMIRLAVSHFQFALEQKPTFEIA 334

Query: 263 SICAAKSLISQNKKRKAEVILEKIW 287
            I  A   I     R+AE   +K +
Sbjct: 335 YIHLASMYIEAGDYRRAEDTYQKAF 359


>gi|190572311|ref|YP_001970156.1| hypothetical protein Smlt0234 [Stenotrophomonas maltophilia K279a]
 gi|190010233|emb|CAQ43841.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 845

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 21/204 (10%)

Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             GD N A  +  +A+++ P     W+ +A  +  ++   +  A   L +  + +     
Sbjct: 420 SRGDFNGAMAFFGQAIEVDPEFALAWLGQARCRFAMMN--YRDARRLLAEADRRSGHLTP 477

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
              + +   +L+     D   +        +L  + + AS  A  +L  +N+  +A  + 
Sbjct: 478 RERLYVQNWALQI---SDPDRATDGWARMAELYPDYMPASYNAGLNLFHENRLAEALALS 534

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            ++         A     L  E    +  RAL L        E+ +  S+ A        
Sbjct: 535 RRV---------AQSRVEL-PEIAQDQYGRAL-LASER--YAEADIAFSRAAGNGWEGAL 581

Query: 344 AHAKAMLAMKIAPRKEIFLLLAQI 367
                + A +    ++   LLA+I
Sbjct: 582 MRQATVAAARSE-FEKANALLARI 604


>gi|308801917|ref|XP_003078272.1| O-linked N-acetylglucosamine transferase (ISS) [Ostreococcus tauri]
 gi|116056723|emb|CAL53012.1| O-linked N-acetylglucosamine transferase (ISS) [Ostreococcus tauri]
          Length = 322

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 4/96 (4%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD + A+ Y   A  + PD     E++ Q  V       A+   +   +  +E   
Sbjct: 132 ARTRGDRSRAEVYFLSATRLRPDDALAWESLAQNQVEDGRLDNALKTYDGAIERIRESPG 191

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
               L   R   +  K +  A  +DA  +LK+    
Sbjct: 192 ----LYFGRGTVHQKKENFQACVNDAEHALKIASEF 223


>gi|307111633|gb|EFN59867.1| hypothetical protein CHLNCDRAFT_133694 [Chlorella variabilis]
          Length = 369

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 11/128 (8%)

Query: 129 IALAERQYNIAHEKLEMM---LQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDIS 184
                 ++ +A E    M      P      +      E+ + G    A     +AL   
Sbjct: 160 ACQVAGRWELAVEVFLGMQCATMRPTAHTVGLLLGTLCEAGQAG---HALCLLCEALRGR 216

Query: 185 PDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            +  P    AV+Q      +W  A+      +      + + A L++A  +     G+  
Sbjct: 217 YELGPSAYHAVLQLLAGLGDWRAALGVYRAMQLVKAGPDASSAGLIVAACMH---GGNQA 273

Query: 244 ASYHDAIE 251
            +   A E
Sbjct: 274 LAAQLAGE 281


>gi|299066879|emb|CBJ38074.1| conserved protein of unknown function, TPR repeat [Ralstonia
           solanacearum CMR15]
          Length = 425

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 102/278 (36%), Gaps = 26/278 (9%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + ++  P      R+ A+Y L  +  R G L+ A+  + + L     A  
Sbjct: 84  GETERAIRVHQNLVNRPDLPANERDHALYELGQDFLRAGLLDRAEE-SLRMLMEGVFAEP 142

Query: 190 VTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +++ Y + KEW +AI      +    ++++   A      + E+  + D+ A+   
Sbjct: 143 AKRVLLELYEVEKEWRKAIDAARELQTLQGQDYSVQIAQFCCELAQESLQRKDVAAAVEW 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305
              +L+   N++ A+I      + +     A      I + NP       +  L++E   
Sbjct: 203 LERALQENPNNVRATIQLGDVALGKGDTEGAIKRWRSIEQQNP------AFLPLVAERLM 256

Query: 306 NTVGKLKR-ALRLEEINKE-----SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
               +L R A  L  +  +       E L +V +  L++  ID A A     ++  P   
Sbjct: 257 KAYAQLGRAAEGLAWLRSKMDARLGPELLDVVYRYELDVHGIDDAVALMREQIRRQPSLM 316

Query: 360 IFLLLAQIEQANSHNTDKILYWTQSAL----HAMPDPL 393
               L + E A   +          A      A+ DP+
Sbjct: 317 ALTRLVEAE-ATRASEAVSHEVAAVAAPISDSALADPV 353


>gi|300023725|ref|YP_003756336.1| hypothetical protein Hden_2217 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525546|gb|ADJ24015.1| TPR repeat-containing protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 558

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 70/247 (28%), Gaps = 22/247 (8%)

Query: 129 IALA-ERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            A         A       L+        R   +      + R+G +  A      A+++
Sbjct: 37  AAQMVRGDVATAVTAYTEALRDTGLANDRRATILNDRAVANARLGQIKLALEDYNHAVEL 96

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P+ P          V   +   A+   ++    A  +    A     R+      G   
Sbjct: 97  FPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAPGY----AAAYSNRANAEMKLGKPA 152

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-- 301
            +  D  ++++L   S         + ++ +K   A     +    +     A  Y +  
Sbjct: 153 VAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSADA--RFATAYRNRA 210

Query: 302 ------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
                  L ++ +  L RA      +  + E  V+     L   +   A      A+++ 
Sbjct: 211 EARMTIGLRDDAIEDLSRA---IAFDVNNTELYVVRGYAYLLNANTASALKDFSRAIELD 267

Query: 356 PRKEIFL 362
           P      
Sbjct: 268 PNASAAF 274


>gi|15808001|ref|NP_285665.1| GGDEF family protein [Deinococcus radiodurans R1]
 gi|6460735|gb|AAF12440.1|AE001863_65 GGDEF family protein [Deinococcus radiodurans R1]
          Length = 860

 Score = 37.2 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 104/332 (31%), Gaps = 75/332 (22%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
            +A K+H+        H      LL  +  L+ RQ+  A E  E                
Sbjct: 37  EVAAKLHAATDTAQGLHR-AYAELLLARTLLSTRQWQAALESFEK--------------- 80

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKN 217
                           A K+L     A  V  AV+ +    +   +++ A     + +  
Sbjct: 81  ----------------ARKSLLALERAALVAHAVLGRVYILLGTGQYAEASAEAAELEAQ 124

Query: 218 AKEWNRN----RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL--- 270
                      RA+ L A +     +G  + + +   E+LKL +      I AA      
Sbjct: 125 LANGPVQAMEIRALALNAIAYAEYAQGRPVQAINHLKEALKLREQLSPI-IIAACLCNLG 183

Query: 271 ---ISQNKKRKAEVILEKIWKVNP------HPEIAN----IYTHLLSENTVGKLKRALRL 317
              I Q   R+A   L + ++ +P        E+A      Y H L+ + +       + 
Sbjct: 184 ISNIEQGNYREAIYWLMEAYRAHPDSNEDRQLELATLTNLAYAHYLAGD-LSLATEITQK 242

Query: 318 EEINKESVESLVIVSKIALEMGSI-------DQAHAKAMLAMKIAPRKEIFL----LLAQ 366
                   +S  + +  AL +G+         +A +    A+ ++  +        L A 
Sbjct: 243 AYAAAGEWQSYKVRAYSALNLGTYNTELQQTGRARSYLQEALVLSQTQPELTADAVLRAS 302

Query: 367 I------EQANSHNTDKILYWTQSALH-AMPD 391
           I       +    N++  L     A   A  D
Sbjct: 303 ILDSLGTLEHQDGNSESALELYTRAREIAQRD 334


>gi|293398849|ref|ZP_06643014.1| hypothetical protein NGNG_00031 [Neisseria gonorrhoeae F62]
 gi|291610263|gb|EFF39373.1| hypothetical protein NGNG_00031 [Neisseria gonorrhoeae F62]
          Length = 497

 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCD 257
           A++W +   F     + AK      A++ +A +L+  ++GD  A+   +  A+E+     
Sbjct: 90  ARQWHKVRQF---AARYAKLPRHKPALIHLADALQKRNEGDFRAAGNSFQTALEAEPDNP 146

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286
             +   + A +     N+ +++    EK+
Sbjct: 147 RLL---LEAGRFYAEDNQNKESAAAFEKV 172


>gi|288928222|ref|ZP_06422069.1| tetratricopeptide repeat (TPR) family protein [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288331056|gb|EFC69640.1| tetratricopeptide repeat (TPR) family protein [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 678

 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 13/195 (6%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
            D   A+  A +A+ ++P    + +      +   ++  AIT  N+  K     NRN   
Sbjct: 89  DDYVGAEEDAGEAISLNPYIEDIYDLRAISRIRQSKYQEAITDYNRAIKLNP-SNRNYWY 147

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
               R+    +  D   ++HD    +    +   A    A+  + +    KA   L+K  
Sbjct: 148 N---RAACRMNGKDYAGAHHDIDTIVSRWADYANAYTLNAEVYLHEKDTLKAAEWLDKGL 204

Query: 288 KVNPHPE---IANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           K++P+         Y  L  +        L +A+ L+  N ++  +   ++++ L   ++
Sbjct: 205 KLDPYDANVWTMRAYISLSRKQWREADEFLGKAIHLKSKNVDNYLNR-AIARVNLN--NL 261

Query: 342 DQAHAKAMLAMKIAP 356
             A A   LA+++ P
Sbjct: 262 RGAMADYDLALELDP 276


>gi|302410821|ref|XP_003003244.1| bimA [Verticillium albo-atrum VaMs.102]
 gi|261358268|gb|EEY20696.1| bimA [Verticillium albo-atrum VaMs.102]
          Length = 835

 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 92/274 (33%), Gaps = 20/274 (7%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATRE--FAVYS-LYFESCRIGDLNSAQRYATKALDIS 184
           Q A     Y  A +    +  +  +R     VYS + +   R  DL+     A + +D  
Sbjct: 554 QAA-----YVEAEKYFRKLRVLAPSRMEDMEVYSTILWHLKRETDLS---FLAHELIDSE 605

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
             AP     +   + LA+E  +A+    +  +   ++    A     +  E+    +   
Sbjct: 606 WLAPQAWCTLGNAWSLAREPDQALRCFKRATQVDPKF----AYAFTLQGHEHVANQEYEK 661

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +     +++        A     K         KA +       +NP   +       + 
Sbjct: 662 ALGAYRQAITADQRHYNAYYGMGKVHEKLGNYDKARIHFHTASMINPTNAVLICCVGSVL 721

Query: 305 ENTVG---KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-I 360
           E        L+   +  E+   + ++    ++  L +G ++ A  + ++   +AP +  +
Sbjct: 722 EKQKQMGLALQAFTKATELAPRAAQTRYQKARALLAVGQLEAAQKELLILKDLAPDEANV 781

Query: 361 FLLLAQIEQANSHNTDKILYWT-QSALHAMPDPL 393
             LL ++          + ++T   AL     P 
Sbjct: 782 HFLLGKMYIRTGEKQSAVRHFTVALALDPKASPQ 815


>gi|322421634|ref|YP_004200857.1| family 2 glycosyl transferase [Geobacter sp. M18]
 gi|320128021|gb|ADW15581.1| glycosyl transferase family 2 [Geobacter sp. M18]
          Length = 607

 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 98/288 (34%), Gaps = 34/288 (11%)

Query: 97  AHNIPLAR---KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
           A ++  A    +    +  + + + + L  LL V+      + + A      +L+     
Sbjct: 323 AGDVEQALQHYRQAVRLEPEESVYQKNLADLLFVET----GETDEAINIYLKLLEKAPRD 378

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              + +L      +G  ++A+ +  +AL+I P   W  +AV +Q    ++   A T    
Sbjct: 379 VETLLNLGLICKGVGQPDAAESFLQRALEIEP---W-NQAVREQLSELRQ---ARTTAAA 431

Query: 214 KKKNAK-----------EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            +               + +   A      S +   +GD+ A+     + + L      A
Sbjct: 432 PQAPVPAAAAAKVQAEADEDEQSAEERYQTSQDLVAEGDLAAAEAVLHKIIALYPEFAPA 491

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRL 317
               A        K  A    EK  ++ P        +A+ Y  +   +  G +   L  
Sbjct: 492 HNDLAVLAYQHGDKETARARYEKAARLAPGNSTFQKNLADFYF-IEGCDVDGAINIYLEQ 550

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFL 362
            +    ++E+L+ + KI   +    +A +     + I P        L
Sbjct: 551 LKKEPRNIETLMSLGKICTLLDRPQEAESFYGKVIHIEPWNRDARECL 598


>gi|222106795|ref|YP_002547586.1| transcriptional regulator LuxR family [Agrobacterium vitis S4]
 gi|221737974|gb|ACM38870.1| transcriptional regulator LuxR family [Agrobacterium vitis S4]
          Length = 894

 Score = 37.2 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 53/199 (26%)

Query: 127 VQIALAERQYNIAHEKLEMMLQI------PATREFAVYSLYFESC--RIGDLNSAQRYAT 178
            Q A      + A E  + ++          T   A+  +         GDL +A     
Sbjct: 535 GQAAFFSGDCSGAEEYYQQLIDEVQACIGKGTDLDALGQVLKAELLVMRGDLEAA----- 589

Query: 179 KALDISPDAPWV------TEAVVQQYVL-----------AKEWSRAITFLNQKKKNAKEW 221
                 P   W        +A                    + + A    ++ +  AK  
Sbjct: 590 -----GPCLRWALPHLERHDAWFDLLAAGFTAQQMIFRLEGDMTAAHALADRTRSAAKRR 644

Query: 222 NRNRAILLI--ARSLENADKGDMIASYHDA------IESLKLCDN---------SIMASI 264
             +R I LI  AR L   + GD+  +   A      +E +    +            A +
Sbjct: 645 GFHRLIRLIDGARVLLLLESGDVEQAIRYAKAHGFGMEDITSVPDNNLAIHLRGLTPA-L 703

Query: 265 CAAKSLISQNKKRKAEVIL 283
             A+  + +    +A   L
Sbjct: 704 LWARIHLVRGDLERARQAL 722


>gi|302805364|ref|XP_002984433.1| hypothetical protein SELMODRAFT_41131 [Selaginella moellendorffii]
 gi|300147821|gb|EFJ14483.1| hypothetical protein SELMODRAFT_41131 [Selaginella moellendorffii]
          Length = 759

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 35/66 (53%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              + RA L +  +  +A +G+++ +   A+++L +   S MA +      +SQ + ++A
Sbjct: 689 TGTQARASLYVNFAAIHAMQGELLQARQCALQALAIAPGSSMAVLAMVYVELSQGRTKEA 748

Query: 280 EVILEK 285
             +L++
Sbjct: 749 VTMLKR 754


>gi|242767872|ref|XP_002341455.1| cell cycle control protein (Cwf4), putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218724651|gb|EED24068.1| cell cycle control protein (Cwf4), putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 673

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 32/248 (12%)

Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182
           ++Y  A    +  L   P ++   ++  Y    +  GD              +Y  + + 
Sbjct: 257 KEYERARAIYKFALDRLPRSKSITLHQAYTTFEKQFGDREGVEDVILNKRRVQY-EEQIR 315

Query: 183 ISPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL- 234
            +P     W   A +++   + +  R      +              R    L I  +L 
Sbjct: 316 ENPRNYDVWFDYARLEE--ASGDADRIRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALW 373

Query: 235 ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290
           E  +  D+  +     E LKL            +  A+  I Q   + A   L +   + 
Sbjct: 374 EEMESKDIGRARQIYQECLKLIPHKNFTFAKIWLMKAQFEIRQMDLQAARKTLGQAIGMC 433

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHA 346
           P  ++   Y  L  E  + +  R   L E     N  + ++ +  +++   +  +++A A
Sbjct: 434 PKDKLFRGYIDL--ERQLFEFNRCRTLYEKHIEWNASNSQAWIKFAELERGLEDLERARA 491

Query: 347 KAMLAMKI 354
              L ++ 
Sbjct: 492 IFELGIEQ 499


>gi|222524979|ref|YP_002569450.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|222448858|gb|ACM53124.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 1090

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 61/208 (29%), Gaps = 20/208 (9%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
              +     E L  LL +Q    + Q     +  E +  +P   +  +  L       GD
Sbjct: 108 AQGRSLQAAESLRELLSLQP-ELDDQRRRLAQLYEDIGALPEAADTHLE-LAQRLIAQGD 165

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQY----------VLAKEWSRAITFLNQKKKNAK 219
           L +A +    AL + P+     +   +            V  +  S     L        
Sbjct: 166 LAAALQEVEWALRLVPNQRAARDLATRLREQLGTQPVASVAMRGTSGLRPSLPTGALRGS 225

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                    LIA ++     GD   +     ++L+                 S+   + A
Sbjct: 226 ASQPEH---LIAEAMACQQAGDEDRAVELYEQALQAGLERADVLYSLGLLYQSRGNLKAA 282

Query: 280 EVILEKI-----WKVNPHPEIANIYTHL 302
             +L +      + ++ H  +  +Y  L
Sbjct: 283 VGVLTRAAGDPEYALSAHFALGQVYRDL 310



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 29/217 (13%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   G    + R A +AL   P       A          + +A+       ++  E 
Sbjct: 16  RDASAQGRWEDSLRAAVRALQEFPQDLEARTAAAVALFQTNRFDKALQAF----RDLYET 71

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R  A  L   +     +GD+ A+         L                +Q +  +A  
Sbjct: 72  DRTNAFFLSYIAQCYQRQGDVAAAADAYRALADL--------------HSAQGRSLQAAE 117

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L ++  + P             ++   +L +         E+ ++ + +++  +  G +
Sbjct: 118 SLRELLSLQP-----------ELDDQRRRLAQLYEDIGALPEAADTHLELAQRLIAQGDL 166

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             A  +   A+++ P +     LA   +         
Sbjct: 167 AAALQEVEWALRLVPNQRAARDLATRLREQLGTQPVA 203


>gi|170077429|ref|YP_001734067.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
 gi|169885098|gb|ACA98811.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
          Length = 714

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 94/285 (32%), Gaps = 33/285 (11%)

Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163
           + +  Y     T  +     L + Q+  A  +++ A E  + +L++   R  A +     
Sbjct: 348 QALAQYQEILQTVPDHEGALLGKAQVLQALERFDAAVETYDQLLEVNPQRWEAWWGKGKI 407

Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWS----RAITFLNQKK-- 215
           +      + A  +  +A+         W T+A +       + +     A+  L+ ++  
Sbjct: 408 ASDRQQDDQALTFLDRAIQEDSRQAVVWETKARIHLRREETDAALNSLGALLRLDSQQVW 467

Query: 216 -------KNAKEWNRNRAILLIARSLENAD--------KGDMIASYHDAIES-------L 253
                   +      N AI    ++L+  D        +G+  +      E+       +
Sbjct: 468 AWFEKGWIHHNRAEYNEAIAAYQQALKLDDQNANIWYQQGNSYSKLQRYREAKNAYVRVV 527

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGK 310
           +L  +   A      +  +     +A+     + ++ P+ + A     +    + +    
Sbjct: 528 ELEPDRAPAWYSLGMAQENLRNYPEAQDAFANVTRLEPNNDRAWYHLAWNAEQNGDRPTA 587

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +    R   +N +   S   +  +  +  + D+A       +++ 
Sbjct: 588 IDAYQRTVALNSDDRPSWRSLGNLLYDSENYDEAITAYENTLRLD 632


>gi|154336703|ref|XP_001564587.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061622|emb|CAM38653.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 426

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 51/141 (36%), Gaps = 20/141 (14%)

Query: 166 RIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKKK- 216
             G +    +    A  I      P  P +   +++    + +  ++      L Q  + 
Sbjct: 259 AAGQVERQLQLVQAAHSIQEKRLGPMNPQLAMTLLEVADAHRVNGDFYNQKALLEQAMEL 318

Query: 217 NAKEWNRNRAILL-IARSLENA--DKGDMIASYHDAIESLKLCDNSI--------MASIC 265
             + + +  A L+    +L +A     +        +E+L++              A++ 
Sbjct: 319 QQRSFGQQHAHLIDTYIALGDACGQLENPELQAQYYLEALRIARQRFQGRHIAIGKAAVN 378

Query: 266 AAKSLISQNKKRKAEVILEKI 286
           AA++  SQ    KA+ +L++ 
Sbjct: 379 AARAYRSQGDNAKAQALLDEA 399


>gi|167033511|ref|YP_001668742.1| TPR repeat-containing protein [Pseudomonas putida GB-1]
 gi|166859999|gb|ABY98406.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas putida GB-1]
          Length = 351

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 66/207 (31%), Gaps = 22/207 (10%)

Query: 190 VTEAVVQQYVLA-KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
             +A++     A   +   +    ++ + A E     A   +  +     + D   +   
Sbjct: 138 AVDALLGLDPDAIGLYFGPLQAALEQYQQALEQQPEDADAQVHLARLYLHENDYTQASTA 197

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308
              +L +   ++ A     + L  Q     +  +L K   ++P          L      
Sbjct: 198 LQRALAVDPGNLDALATQVRLLERQGHHDASRQVLGKALTLSPDSAFLQYELGLWLNRHE 257

Query: 309 GKLKRALRL---EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFL 362
            +    L L    E++ ++ +    ++    E+  +D A  +    +   P   R  + L
Sbjct: 258 QREYALLALSRAVELDPDNTDYRYTLAVTLHELEQLDAAQKQLETVLNRQPANRRARVLL 317

Query: 363 ---------------LLAQIEQANSHN 374
                          LLA++E+ N  +
Sbjct: 318 IQYWKESGQLQNVQVLLAELERQNPDD 344


>gi|156743153|ref|YP_001433282.1| hypothetical protein Rcas_3210 [Roseiflexus castenholzii DSM 13941]
 gi|156234481|gb|ABU59264.1| conserved hypothetical protein [Roseiflexus castenholzii DSM 13941]
          Length = 709

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 23/117 (19%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--------------------RNRAIL 228
           WV  A+    +    W+ A        + A                        R RA++
Sbjct: 408 WVMIALYGAGMATARWNGARATPRLALQAAIVATFFGLLLTYRDYPAIISSGVARERAMI 467

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
               + +  D      ++  A+ +       + A +  A +L +Q +  +A  ++ +
Sbjct: 468 AGLSAYQAHDYPAAEQAFRAALAAQ---PRFVDAQVHLALALAAQQRYDEALALIRR 521


>gi|325914248|ref|ZP_08176598.1| tetratricopeptide repeat protein [Xanthomonas vesicatoria ATCC
           35937]
 gi|325539503|gb|EGD11149.1| tetratricopeptide repeat protein [Xanthomonas vesicatoria ATCC
           35937]
          Length = 551

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            LL  +IA   ++Y+ A E    +    Q+   R  A  +LY    +   L   +   + 
Sbjct: 302 RLLLGKIAEFLKRYDEAVEWYRGVPGGSQLSEARLRAASALYELGRKPEALAEVRALQSD 361

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A               + +  A +    +    +      +       LL AR L    +
Sbjct: 362 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DGALLYARGLAWERR 417

Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295
            D+  +  D  + L     ++ A +           + ++A  ++++    +P +P I  
Sbjct: 418 DDVARAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 477

Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
                +Y    ++  + +L+RA  L +      E    V ++    G  D+A      A 
Sbjct: 478 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 533

Query: 353 KIAPRKEIF 361
           ++ P     
Sbjct: 534 RLDPDNRAL 542


>gi|301757198|ref|XP_002914452.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 1-like [Ailuropoda melanoleuca]
          Length = 480

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 17/145 (11%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +   +G     ++Y  +AL       +V     + Y       +A+  L    +   
Sbjct: 221 LALKLQDLGQEAEGEKYIEEALTNMSSQTYVFRYAAKFYRRKGSLDKALQLLKTALRATP 280

Query: 220 EWN-RNRAILLIARSLENA------------DKGDMIASYHDAIE----SLKLCDNSIMA 262
                +  I L  R+                D+ ++      A+     +L+      +A
Sbjct: 281 SSTFLHHQIGLCYRAQMIEIKRAANWQPRGKDRENVDRMIRLAVSHFQFALEQKPTFEIA 340

Query: 263 SICAAKSLISQNKKRKAEVILEKIW 287
            I  A   I     R+AE   +K +
Sbjct: 341 YIHLASMYIEAGDYRRAEDTYQKAF 365


>gi|260177232|gb|ACX33953.1| putative TPR repeat-containing protein [uncultured prokaryote EC6]
          Length = 1226

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 70/255 (27%), Gaps = 45/255 (17%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            +   AR   +    +    +   +  L+  +  A  + + A    E  +        A+
Sbjct: 414 GDRKAAR--AAIEQARRLGPDNPQLLALDGYVHAAAGRISEARRAFEEAVLKDGRLGDAL 471

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     R G   +  ++   A    P                                
Sbjct: 472 LGLGLCLIRQGQKEAGLQFLQMAAAREP-------------------------------- 499

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                  RA L    +      G+  A+      + ++        + +A     +N+  
Sbjct: 500 ------QRATLKSYLAKAYELTGNPAAAMDQLRAAERVDPQDPTPRLYSALIKQQENRIN 553

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           +A   LEK  + N   +   +Y   +  +   +  R   L  I +++  + V V +    
Sbjct: 554 EAIADLEKSVEEN---DNRQLYRSRVLLD-QDRAVRGANLAAIYRDAGMADVSVREATRA 609

Query: 338 -MGSIDQAHAKAMLA 351
                  + A   LA
Sbjct: 610 VSSDYGNSSAHLFLA 624


>gi|289670466|ref|ZP_06491541.1| fimbrial biogenesis protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 270

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 59/225 (26%), Gaps = 38/225 (16%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L     + GD  SA+     AL     +      +        + + A        + A
Sbjct: 60  GLARNRLQTGDYASAEEQVRAALKKDAQSVDAIGLLALIQGAKGDTAAA----GVSYRRA 115

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKK 276
            E    R  +L          G    +      +L     +  AS    A    I   + 
Sbjct: 116 AELAPQRGDVLNNYGAWLCANGSPAEALTWFDRALADRTYASPASALGNAGGCAIKAGQP 175

Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
            +A   L K                                 +++ ++  +L  ++++  
Sbjct: 176 ERAAGDLRKA-------------------------------LDLDPDNPYALESMARLEA 204

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380
              +  +A A     +  AP    +  L  QIEQ          Y
Sbjct: 205 ARRNYFEARAFIERRLSAAPATASVLQLAIQIEQGLGDKVAAGRY 249


>gi|260426789|ref|ZP_05780768.1| tetratricopeptide region [Citreicella sp. SE45]
 gi|260421281|gb|EEX14532.1| tetratricopeptide region [Citreicella sp. SE45]
          Length = 286

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 33/110 (30%)

Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
               N A    +    +   R   +  L     R      A     K +  +        
Sbjct: 51  AGDPNEAVAYFQRADGMDPDRIDLLRGLAKSLVRAKRNTEAVAAWNKVVSHADATDEDRV 110

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           ++    +   +W RA   LN      + + R R   +IA S +N  K D 
Sbjct: 111 SLADAMIRNNDWDRAEATLNAIPPTHESYQRYRLEAMIADSNQNWAKADS 160


>gi|258404971|ref|YP_003197713.1| peptidase M48 Ste24p [Desulfohalobium retbaense DSM 5692]
 gi|257797198|gb|ACV68135.1| peptidase M48 Ste24p [Desulfohalobium retbaense DSM 5692]
          Length = 470

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 49/168 (29%), Gaps = 17/168 (10%)

Query: 135 QYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             + A            T   A+  ++  E  +   +  A +   +ALD +PD P V   
Sbjct: 276 DPSSALVAFNDTQSEQDTCMLALGRAIALERLQR--VEEAGQAYERALDCAPDDPLVQRE 333

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                 L  +  RA   L        +        +   +   A  GD   S     E +
Sbjct: 334 AGHFMYLQGKLDRARRLLKAAL----DQRHTDTRAMFWYAQTLAQAGDPEHSIRIGEEVV 389

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +    +  A     +    + K           ++ + H   A +Y H
Sbjct: 390 RREPRNARAHAFLGRLQGQRGKL----------FEAHLHLAYAALYGH 427


>gi|167999889|ref|XP_001752649.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696180|gb|EDQ82520.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 717

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 90/282 (31%), Gaps = 31/282 (10%)

Query: 98  HNIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF 155
            +I  AR+ +    +Q         +++   Q     ++   A    +  +  IP  +  
Sbjct: 247 GDISRARQCYERAMEQLGEDGQTEELFVAFAQFEERCKEPERARVIYKYALDHIPKGKAE 306

Query: 156 AVYSLYFESCRI-GDLNSAQRYA--------TKALDISP--DAPWVTEAVVQQYVLAKEW 204
            +Y  + +  +  GD    +            + +  +P     W   A +++ V   + 
Sbjct: 307 TLYQKFVQFEKQYGDREGIENVVVGKKRFQYEEEVKKNPLNYDSWFDYARLEESV--GDK 364

Query: 205 SRAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD- 257
            +      +   N     + R       L I  +L E  +  D   +       L +   
Sbjct: 365 EKVREVYERAIANIPPAEQKRYWQRYIYLWINYALYEELEAEDYDRTRDVFKACLSIIPH 424

Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314
                    I AA+  I Q   + A  IL       P  +I   Y  +  E  +G + R 
Sbjct: 425 SKFTFSKIWIMAAQFEIRQKDLKAARTILGNAIGRAPKDKIFKTYIEI--ELQLGNINRC 482

Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
             L     E +  +  +    +++   +G  ++  +   +A+
Sbjct: 483 RTLYEKYLEWSPANCYAWSKYAELERSLGETERGRSIFEIAI 524


>gi|72390083|ref|XP_845336.1| cell division cycle protein 16 [Trypanosoma brucei TREU927]
 gi|62360434|gb|AAX80848.1| cell division cycle protein 16, putative [Trypanosoma brucei]
 gi|70801871|gb|AAZ11777.1| cell division cycle protein 16, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 547

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 60/182 (32%), Gaps = 21/182 (11%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           +AA +   A ++ + V++    + + +   ++                 E +   P+   
Sbjct: 49  LAARDYDQAFRIAADVAKDFEGNMQAVAIAMKS-AYEL-GDVRGCSAYAERLKDSPSMNV 106

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----KEW------ 204
            A+  L   +   GD   A      ALDI P       A++++ +L     ++       
Sbjct: 107 VALCYLGRCAELSGDTKRAVHNYCAALDIDPFCGEPMNALIERRLLGVNELRDTIESLRL 166

Query: 205 ---SRAITFLNQKKKNAKEWNRN------RAILLIARSLENADKGDMIASYHDAIESLKL 255
              + A+      +   +   +       R  LL+  +    ++ D+  +       LK+
Sbjct: 167 PPEAEALRASYYARLPGEFVPKEFDKYIPRTTLLLQAARTEYERNDLQQALSLTTSLLKI 226

Query: 256 CD 257
             
Sbjct: 227 SP 228


>gi|88808171|ref|ZP_01123682.1| truncated O-antigen biosynthesis protein [Synechococcus sp. WH
           7805]
 gi|88788210|gb|EAR19366.1| truncated O-antigen biosynthesis protein [Synechococcus sp. WH
           7805]
          Length = 642

 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 31/94 (32%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             + A  +  +  A   L+  + +      A++ L     + G+   A +   ++  + P
Sbjct: 13  AGRKASEQGHWIAAEPLLQRAVALAPEHGSALHLLGKLRQQQGNHAEALQLQERSCRVDP 72

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
              W   +  +     + W+ A T   Q      
Sbjct: 73  ALGWNWFSAGELLAQQQRWADAQTCFEQALARLP 106


>gi|254464214|ref|ZP_05077625.1| tetratricopeptide repeat domain protein [Rhodobacterales bacterium
           Y4I]
 gi|206685122|gb|EDZ45604.1| tetratricopeptide repeat domain protein [Rhodobacterales bacterium
           Y4I]
          Length = 813

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 90/286 (31%), Gaps = 45/286 (15%)

Query: 113 QHTFHNEYLVYLL----EVQIALAERQYNIAHEKLEMMLQIPATR-----EFAVYSLYFE 163
           +H    + L  LL     +  A  + +   A    +     P +R           L   
Sbjct: 226 RHDLSYKGLFRLLDEVSTIVTATIQPEILEAERA-KAERVAPESRNAWQEFVLGQHL-IA 283

Query: 164 SCRIGDLNSAQRYATKALDISPDAP-----------------WVTEAVVQQYVLAKEWSR 206
           +       +A+ +  +AL + P +                  W   A +     A++  R
Sbjct: 284 APDSDANAAARSHFRRALALEPGSGRIHAGLAMTHLWDYKYDWSESAELSLASAARDAER 343

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266
           A+T          +      + +   SL   D     A+   A +++ +   S MA  C 
Sbjct: 344 ALTL------APDDSWAWSILAICELSLRRFD-----AAVASAGKAIDVDPASAMAYGCQ 392

Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS------ENTVGKLKRALRLEEI 320
           +  L    +  +A    ++  +++P+     ++            +  G L  A  L  +
Sbjct: 393 SWVLAYSGRYEEALTAFDRAMQLSPNDRRRGLWLTGKGISQFGLGDFEGALASARALIAL 452

Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
           +        +       +G + +A   +   M + P  ++   +A+
Sbjct: 453 SPNHPSGHRMKCASLASLGRLVEARRASATLMSLLPHHDVAAAVAR 498


>gi|194913129|ref|XP_001982631.1| GG12634 [Drosophila erecta]
 gi|190648307|gb|EDV45600.1| GG12634 [Drosophila erecta]
          Length = 702

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 80/252 (31%), Gaps = 26/252 (10%)

Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176
            +    +++++ A    +  L       T+E    +      + GD         S ++Y
Sbjct: 254 ARFEEGQKEHDRARVIYKYALDHLPKDRTQEL-FKAYTIHEKKYGDRAGIEDVIVSKRKY 312

Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230
              + +  +P         ++      E  +      +   N    N     R    L I
Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEAEGERDQIRETYERAISNVPPANEKNFWRRYIYLWI 372

Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285
             +L E  +  D   +       L+L            +  A+  I   + ++A   L  
Sbjct: 373 NYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGL 432

Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
              + P  ++   Y  L     E    +L    +  E   E+  + +  +++   +G  +
Sbjct: 433 AIGMCPRDKLFRGYIELEIQLREFERCRL-LYEKFLEFGPENCSTWMKFAELENLLGDTE 491

Query: 343 QAHAKAMLAMKI 354
           +A A   LA++ 
Sbjct: 492 RARAIFELAVQQ 503


>gi|171687018|ref|XP_001908450.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943470|emb|CAP69123.1| unnamed protein product [Podospora anserina S mat+]
          Length = 712

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 20/154 (12%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQ----- 197
           + P        +LY      G+ + A ++  +AL+  PD     + +     + +     
Sbjct: 403 RDPEALVLRGRALY----ATGENDKAVQHFRQALNCDPDFRDAIKWLRVVQKLDRMKEEG 458

Query: 198 --YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
                A  W  A     +  +         + L   R+L          +  D  +++ L
Sbjct: 459 NSEYKAGRWQSAFDLYTKALEVDPANKGTNSKLYQNRALCRIKLKQYDEAIADCEKAVSL 518

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
             + + A    A +L    K   A       WK 
Sbjct: 519 DPSYLKARKTKANALGLAEKWEAAVR----EWKA 548


>gi|159482238|ref|XP_001699178.1| nuclear pre-mRNA splicing factor and U1 snRNP component
           [Chlamydomonas reinhardtii]
 gi|158273025|gb|EDO98818.1| nuclear pre-mRNA splicing factor and U1 snRNP component
           [Chlamydomonas reinhardtii]
          Length = 476

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 55/216 (25%), Gaps = 29/216 (13%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
            G+  + Q    + L    + P   +  V+      + + A   L++       + + R 
Sbjct: 266 RGEPTATQTVYERCLVACANYPEFWQRYVRYLEARGDEAGAKAALDRGV---LVFCKRRP 322

Query: 227 ILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
            + +  +  +   GD+  +    +  L  +    I A   AA     Q     A   L  
Sbjct: 323 EMHMFAAHWDELHGDIAGARARYVHLLTHVSPRLIEAVTSAANFERRQGDLAAANKYL-- 380

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
                         + L  E    +  R      I+                 G +  A 
Sbjct: 381 --------------SDLTEEERSKEGSRIYPFLAIHLAHFLRR--------HSGDLAAAR 418

Query: 346 AKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKILY 380
                A++  P        A   E+           
Sbjct: 419 KVLDDALEQCPGVRSLWEAAVHFEELAGGPEAVARA 454


>gi|149201804|ref|ZP_01878778.1| hypothetical protein RTM1035_04670 [Roseovarius sp. TM1035]
 gi|149144852|gb|EDM32881.1| hypothetical protein RTM1035_04670 [Roseovarius sp. TM1035]
          Length = 970

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 68/239 (28%), Gaps = 29/239 (12%)

Query: 132 AERQYNIAHEKLEMMLQIPA----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
                + A  +++ +L         R   V      +   GD   A   A+   +  P+ 
Sbjct: 438 LGGDLDGASRQIDAILDQQPDFLPARLAEVR----YALAKGDAAQAVTLASALSEARPEN 493

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
           PWV  + +Q    A +   A T    +    +             +L             
Sbjct: 494 PWVLMSHLQSLCKAAQHDAACTLFLTRLAEIEIDEPMMTT-----ALNTLLGSVPQKKQV 548

Query: 248 DAIES-LKLCDNSIMASICAAKSLISQ---NKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
             ++S   L   S   S+   +  +             +LE+  +  P P  A     + 
Sbjct: 549 TFLKSVHDLKPES---SVVQLRLAMRAHVSGDTALTIDMLERAERAGPLPAYA---ARIK 602

Query: 304 S------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           S                L L E   E VE+L  + + A   G  D +       + + P
Sbjct: 603 SQVLPLVGTMDAATDAVLSLWEAGAEDVETLCRLCRFAAAAGRFDLSLTVLRRTLDLHP 661


>gi|39937770|ref|NP_950046.1| TPR repeat-containing protein [Rhodopseudomonas palustris CGA009]
 gi|39651630|emb|CAE30152.1| TPR repeat [Rhodopseudomonas palustris CGA009]
          Length = 582

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 52/206 (25%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
               D   AQ+   +AL + PD+P      + Q   A  WS     +   ++   +  R 
Sbjct: 336 LTRADSEMAQKLFAEALALDPDSPEA----LIQATAALAWS-----IWAGRQPQDQIQRM 386

Query: 225 RAILLIARSLENADK-------------GDMIASYHDAIESLKLCDNSIMASICAAKSLI 271
           R +   A   +  D                 + + +   +++ L  +  +A         
Sbjct: 387 RKLSQQAMLADPDDGRGFMLAGIAEMWLRHPLEAKNLLRQAITLTPSLALA--------- 437

Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEINKESVESLVI 330
                               H ++   +      +  + +LK A+RL   +     SL  
Sbjct: 438 --------------------HAQLGGCFNLAGEPDRAIVQLKTAMRLSSNDPNIFYSLGE 477

Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356
           ++     +G   +A   A LA+   P
Sbjct: 478 LALAYTMLGQWPEAIEHATLALARRP 503


>gi|295696299|ref|YP_003589537.1| TPR repeat-containing protein [Bacillus tusciae DSM 2912]
 gi|295411901|gb|ADG06393.1| TPR repeat-containing protein [Bacillus tusciae DSM 2912]
          Length = 411

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 84/243 (34%), Gaps = 12/243 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--EFAVYSL--YFESCRIGDLNSAQR 175
            +  L      +A+ + + A   L+++L    +     +      Y  + +     +A+ 
Sbjct: 151 PVARLYLALAYMAQGRGHEAEPHLQILLSTEQSPWILTSARHARAYVYAEQGRWREAAED 210

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
               A++     P +   +    +   EW+ AI     +  +  E +       +     
Sbjct: 211 LVV-AVEGGRGGPILHYNLAVALIRVGEWAGAIE----QLIHVLEVDSRDEEAWLVGIAV 265

Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE 294
               G    +   A+   +L  +S       A  L    +  +A  + +++ ++ P  P+
Sbjct: 266 LKRLGRFRLAISWALHGYRLLPDSWRIGKELAILLDYFGRLEEAARMWKRLLRLQPGDPD 325

Query: 295 IANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           + + +  T     + +       +   +N ++ ++L+ +   ALE G   +A      A 
Sbjct: 326 LWSGWGWTRWRQGDRLSARGAWKKAASLNGKAGQALLYLGWAALEAGDQIKAWRYLERAE 385

Query: 353 KIA 355
           +  
Sbjct: 386 QDE 388


>gi|284053414|ref|ZP_06383624.1| glycosyl transferase family protein [Arthrospira platensis str.
           Paraca]
          Length = 556

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 17/181 (9%)

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P  P       + +   K+W +A++   +  +   + N   A  +   +L+    G+M 
Sbjct: 157 RPVNPETVLQEAKAFCAIKKWEQAVSACQKALR--LDRNLAEAYKIQGNALQML--GEME 212

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           A+     ++L++                 +++  KA    ++   +  +P  A  Y +L 
Sbjct: 213 AAVRSYNKALEVKPQFPEVHANLGSLYAQEDRLEKAVSCYQQA--IAQNPNFAGFYRNLA 270

Query: 304 SENTVGKLKR-------ALRLEEINKE--SVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
               + +L R         +   +     + E  + +    L  G +DQA+     A+++
Sbjct: 271 K--VLERLGREGEASICLEKAYTLEPNKATPEDHLRLGNTRLGQGKLDQAYESYQRALEL 328

Query: 355 A 355
            
Sbjct: 329 N 329


>gi|260222435|emb|CBA31996.1| hypothetical protein Csp_D29910 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 1449

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 59/220 (26%), Gaps = 13/220 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              +    + A +  E +L+       A+ +L      +G+   A     + + + P   
Sbjct: 2   SLQSAGLGDAARQAYEALLRKEPEHLNALNNLGILCNSMGEHQQALGLFEQLIALVPQES 61

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA---RSLENADKGDMIAS 245
                  + +       +A+  L    +  +           A          +G    +
Sbjct: 62  -------KAHANRGVALKALGRLEDAAQAYQHALTLDPRFHSAHNNLGNLLYSQGAFDKA 114

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLS 304
            +    +  L           AK L+   +  +A   L  + + +P   +       L S
Sbjct: 115 LNYFETASSLQPQLGEYRFMLAKCLLELQQMERARSELTLVLRADPTNADAWGTLARLWS 174

Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           E       L    R   +  +    +       L  G + 
Sbjct: 175 EKHAMPEALACFERGIAVRPDYAGLIYNRGLARLLAGDLP 214


>gi|162455684|ref|YP_001618051.1| hypothetical protein sce7402 [Sorangium cellulosum 'So ce 56']
 gi|161166266|emb|CAN97571.1| hypothetical protein sce7402 [Sorangium cellulosum 'So ce 56']
          Length = 290

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 73/251 (29%), Gaps = 40/251 (15%)

Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEA 193
           +Y++A   L  +++    R   VY++        GD  +A+ +  +A+ ++         
Sbjct: 20  EYDLAEHALRQIIEKTD-RFADVYNMLGVILHERGDFLAAEAHFERAVQLNEHYTEALLN 78

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIASY 246
           +   Y    ++  A    ++ ++                A +    +   AD G    + 
Sbjct: 79  LAVTYNDLGKYEAARHVYSRIRRGEGGGGVLDPFARGKIANMHADLAQAYADAGCAQEAI 138

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
            +   ++ LC   +   +                                          
Sbjct: 139 AELTRAVALCPTFVDLQLRLGTMYRDAGNL-----------------------ALAREHY 175

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
              +        + N +   + V++    L +G+ DQA A+   A+ I P      +  +
Sbjct: 176 AAAR--------DANPKYAPARVLLGVALLSLGAPDQASAEWREALAIDPDNRTAKMYLR 227

Query: 367 IEQANSHNTDK 377
             +A       
Sbjct: 228 SLEAQRSGRAA 238


>gi|56696160|ref|YP_166516.1| hypothetical protein SPO1271 [Ruegeria pomeroyi DSS-3]
 gi|56677897|gb|AAV94563.1| hypothetical protein SPO1271 [Ruegeria pomeroyi DSS-3]
          Length = 467

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 10/103 (9%)

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A     L           A  L + +    ++L++ S+ A  +G  D+A + A  A +++
Sbjct: 41  ATAVQALRIGAPEQAYSYAQALLQRDPADRQALLVHSRAARTLGRFDEARSSAQQAWRLS 100

Query: 356 PRK----EIFLLLAQIEQANSHNTDK--ILYWTQSAL-HAMPD 391
                     +++AQ   A + +  +    +W + A+ HA  +
Sbjct: 101 ETDEQKFASSMVMAQ---ALASDERRTLAQWWLRRAVEHAPSE 140


>gi|51892857|ref|YP_075548.1| hypothetical protein STH1719 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856546|dbj|BAD40704.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 422

 Score = 37.2 bits (85), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 35/128 (27%), Gaps = 4/128 (3%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            R G    A     +A  + PD+P     +          + A   L+   + A      
Sbjct: 268 LRAGRTREAIESYRQASALEPDSPLTLGNLAAALFEGGMMAEATALLDAALQKAP----G 323

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
              LL  +       G    +     E+LK   +   A    A    +  +  +A     
Sbjct: 324 DPTLLNNKGHLLLKAGQYREALACFEEALKRAPDDPAALANQAACYFALGRYEQALNAYR 383

Query: 285 KIWKVNPH 292
                 PH
Sbjct: 384 LAVATEPH 391


>gi|332706697|ref|ZP_08426758.1| cytochrome c biogenesis protein [Lyngbya majuscula 3L]
 gi|332354581|gb|EGJ34060.1| cytochrome c biogenesis protein [Lyngbya majuscula 3L]
          Length = 783

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 75/252 (29%), Gaps = 43/252 (17%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREF--AVYSLYFESCRIGDLNSAQRYAT 178
             LL  +I   +   +   ++ + ++Q  P    F  A+  L       GD   A     
Sbjct: 479 TELLLAEIDRRQGNLDATIQRYQRIIQSNPNNNLFYGALRGLAGIHIAQGDPQKALVIYD 538

Query: 179 KALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
           + L    +     +  + +       +   A   LNQ  +     +    +L    SL  
Sbjct: 539 QLLSRDRNDLLAQLGRSSLAYQTKRIDQEEAEGVLNQWLQTQPSIDPPPELL----SLVG 594

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
               D        I  L++  ++    +   + L  ++                  P++A
Sbjct: 595 VLPADPERE-TLYITLLEVSPDNAPVQLRRLQVLAQRD------------------PKLA 635

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                                   N +++++  +  ++A+ +  +  A       ++  P
Sbjct: 636 KAEIAEW--------------IAGNPDNIDAYFVQGELAMGLRDLRLASNAYEEILEREP 681

Query: 357 RK-EIFLLLAQI 367
            +    L LA I
Sbjct: 682 DQIGALLALAGI 693


>gi|321258140|ref|XP_003193826.1| co-chaperone [Cryptococcus gattii WM276]
 gi|317460296|gb|ADV22039.1| Co-chaperone, putative [Cryptococcus gattii WM276]
          Length = 522

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 7/140 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
           +    LAE  Y+ A       +++  T     Y        +G  N+A     + L I+P
Sbjct: 35  DANRLLAEGSYSAAARAYGEAIELDPTAHANYYKRATAYLSMGRHNAALDDFEQILKINP 94

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI-------LLIARSLENAD 238
                     +      ++++A   L    +   +      +            +L+  +
Sbjct: 95  GFVQAHYQRAKILAKEGDFTKAQYELKAYIRTKSDSEAEELLHLITVGEAAEKSALQAFE 154

Query: 239 KGDMIASYHDAIESLKLCDN 258
           KG        + ++L++  N
Sbjct: 155 KGRWQVCVDHSTKALEVGPN 174


>gi|317484802|ref|ZP_07943698.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
 gi|316923932|gb|EFV45122.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
          Length = 282

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 9/142 (6%)

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
           A L            D  ++      +L++   +  A +  A  LI + +  KA   L  
Sbjct: 64  AALHANAGTALYADNDYKSAERQFDAALRIDPTNPEALVGKAGILIQRKEPEKALRQLSL 123

Query: 286 IWKVNPH-PEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +   +   PE+       +Y   L+++    L         +    E+   +  + L  G
Sbjct: 124 VSGTDAASPEVLYNKALAMYQMGLTDDAGTDL---GTYAREHPNDAEAQNALGVVMLRAG 180

Query: 340 SIDQAHAKAMLAMKIAPRKEIF 361
           +   A A    A+ + P +  +
Sbjct: 181 NYASAKAHLDRAIALRPEQGEY 202


>gi|296159383|ref|ZP_06842208.1| putative signal peptide containing protein [Burkholderia sp. Ch1-1]
 gi|295890367|gb|EFG70160.1| putative signal peptide containing protein [Burkholderia sp. Ch1-1]
          Length = 1343

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 1/129 (0%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
                 + + A   L    +           L   + R G  + A  Y  K   + P   
Sbjct: 498 AYERLGRPDDALAFLRSRQRNSPAEAIDTR-LGQLAERSGHDDEALAYYRKLNQLYPSNT 556

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                         ++  A+  L   +K AK+ +          +           +Y  
Sbjct: 557 QYALRTASLLYRHGDYKGALDTLLAARKGAKDDDVLFWRNAAQLARLLQRDDIANDAYRH 616

Query: 249 AIESLKLCD 257
            + S K   
Sbjct: 617 LLASGKAAP 625


>gi|290961586|ref|YP_003492768.1| hypothetical protein SCAB_72431 [Streptomyces scabiei 87.22]
 gi|260651112|emb|CBG74233.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 604

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 58/195 (29%), Gaps = 12/195 (6%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A +YA +AL  +P +     + V   V    +  A+  +        +  R    +    
Sbjct: 295 ALKYADRALKENPYSERALCSRVDALVELGRYDDALKAVKLA-----DARRPGIPVFTRY 349

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKV 289
           +  +  +GD+  +      +L         +  A    +    Q   + A     +    
Sbjct: 350 AYVHELRGDVKTARRVLNLALDSAAGRGDIAYVATQLGQLSWRQGDYKAALAHYARALGA 409

Query: 290 NPH--PEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +    P +         S +T   ++   ++          LV++ ++    G   +A  
Sbjct: 410 DDTYLPALEGRARAQAASGDTAEAIRGLEQVVASYPL-PGPLVVLGELYEAKGDKAKARD 468

Query: 347 KAMLAMKIAPRKEIF 361
           +  L          +
Sbjct: 469 QYALVDAYTAIARSY 483


>gi|257092260|ref|YP_003165901.1| tetratricopeptide repeat-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257044784|gb|ACV33972.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 412

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 42/131 (32%), Gaps = 9/131 (6%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL   + + A    E +L+       A+  L   + R G    AQ+   + L+  P    
Sbjct: 236 ALQANRLDDARSGYEQVLRGDPRNADALLGLAVIATRQGQTERAQQIYLRVLEADPANVT 295

Query: 190 VTEAVVQQY--VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
              A++       + +    +  L   + ++         L  A     A +G    +  
Sbjct: 296 AQAALINLRGHSDSGQSESRLKILLASQPDSPS-------LHFALGNLYARQGRWSEAQQ 348

Query: 248 DAIESLKLCDN 258
              ++  L  +
Sbjct: 349 AYFQAYALEPD 359


>gi|209546640|ref|YP_002278558.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537884|gb|ACI57818.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 624

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 52/175 (29%), Gaps = 13/175 (7%)

Query: 123 YLLEVQIA-----LAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDL-NSAQR 175
            L E   A             A    E  +       E   Y  Y E C        A  
Sbjct: 418 NLAEAHAAKGFALAVAGNRTEAVSAFEQALSLDANCHEANRY--YAEFCVTEAQFELAAT 475

Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR---AILLIAR 232
           +  +A++I P        +V       +  +A ++     K A+E  R     A +    
Sbjct: 476 HFQRAMEIKPADYGAPIMLVNVLRSLGQIDKASSYARIALKKAEEELRLHPENANVACLG 535

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           +   A  G    +      SL    + I     AA +     +  +A  +LE +W
Sbjct: 536 ATALAFLGIRDQALEWLARSLATDPDDINIQYNAACTYALLGEIERAIDLLE-VW 589



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 42/202 (20%)

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLEN 236
           AL I P+      A      +A   + A++   Q      N  E NR         +   
Sbjct: 412 ALVIDPNLAEAHAAKGFALAVAGNRTEAVSAFEQALSLDANCHEANR-------YYAEFC 464

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             +     +      ++++      A I     L S  +  KA                 
Sbjct: 465 VTEAQFELAATHFQRAMEIKPADYGAPIMLVNVLRSLGQIDKASS--------------- 509

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             Y  +        LK+A     ++ E+     + +     +G  DQA      ++   P
Sbjct: 510 --YARIA-------LKKAEEELRLHPENANVACLGATALAFLGIRDQALEWLARSLATDP 560

Query: 357 R--------KEIFLLLAQIEQA 370
                       + LL +IE+A
Sbjct: 561 DDINIQYNAACTYALLGEIERA 582


>gi|119384021|ref|YP_915077.1| hypothetical protein Pden_1276 [Paracoccus denitrificans PD1222]
 gi|119373788|gb|ABL69381.1| hypothetical protein Pden_1276 [Paracoccus denitrificans PD1222]
          Length = 654

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 28/81 (34%), Gaps = 4/81 (4%)

Query: 309 GKLKRALRLEEINKESVESLVI----VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
           G+L RA  +      +    ++    ++      G+          A++ AP + +  L 
Sbjct: 537 GRLNRAFAILHWPDAARPGRMLTRKRLADACFAAGNRKAGWRWLDAALETAPDQPLLRLS 596

Query: 365 AQIEQANSHNTDKILYWTQSA 385
           A +      +  +     ++A
Sbjct: 597 AALRAVEGQDRARAEAHLRAA 617


>gi|87200136|ref|YP_497393.1| TPR repeat-containing protein [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135817|gb|ABD26559.1| TPR repeat protein [Novosphingobium aromaticivorans DSM 12444]
          Length = 505

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 5/159 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            +  LA      A E +    ++       +  L   +   GD  +A + A KA   SP 
Sbjct: 329 AKAQLAAGDARGAVETMRPFAEVQTADAEDLRLLARAAAASGDPEAA-KLAEKAKYPSPQ 387

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
           A   T A     +    W  A+   ++        N   A++L   +      G+   + 
Sbjct: 388 ALAATLAQADTAMKQGNWGNAVAAYDRILAVTDGSN---ALVLNNMAYAQGQLGNSAKAL 444

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILE 284
             A  +LK    +          L+   K + +   +L+
Sbjct: 445 DFAERALKAAPGNASVMDTLGWLLVESGKDKARGLKLLQ 483


>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
 gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
 gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
 gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
          Length = 544

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187
           Q   A    + A    + M         ++  ++  +   GD+ SA+R   +    +P  
Sbjct: 52  QAYAASGLVDDARRVFDGMSHRDTVSFNSM--IHAHAM-SGDVVSARRLFERVPSPTP-V 107

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQ 213
            W +  +V     A + + A     +
Sbjct: 108 TWTS--MVAGLCRAGDVAAARRLFEE 131


>gi|163847142|ref|YP_001635186.1| hypothetical protein Caur_1578 [Chloroflexus aurantiacus J-10-fl]
 gi|163668431|gb|ABY34797.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
           J-10-fl]
          Length = 1095

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 61/208 (29%), Gaps = 20/208 (9%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
              +     E L  LL +Q    + Q     +  E +  +P   +  +  L       GD
Sbjct: 113 AQGRSLQAAESLRELLSLQP-ELDDQRRRLAQLYEDIGALPEAADTHLE-LAQRLIAQGD 170

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQY----------VLAKEWSRAITFLNQKKKNAK 219
           L +A +    AL + P+     +   +            V  +  S     L        
Sbjct: 171 LAAALQEVEWALRLVPNQRAARDLATRLREQLGTQPVASVAMRGTSGLRPSLPTGALRGS 230

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                    LIA ++     GD   +     ++L+                 S+   + A
Sbjct: 231 ASQPEH---LIAEAMACQQAGDEDRAVELYEQALQAGLERADVLYSLGLLYQSRGNLKAA 287

Query: 280 EVILEKI-----WKVNPHPEIANIYTHL 302
             +L +      + ++ H  +  +Y  L
Sbjct: 288 VGVLTRAAGDPEYALSAHFALGQVYRDL 315



 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 29/217 (13%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   G    + R A +AL   P       A          + +A+       ++  E 
Sbjct: 21  RDASAQGRWEDSLRAAVRALQEFPQDLEARTAAAVALFQTNRFDKALQAF----RDLYET 76

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           +R  A  L   +     +GD+ A+         L                +Q +  +A  
Sbjct: 77  DRTNAFFLSYIAQCYQRQGDVAAAADAYRALADL--------------HSAQGRSLQAAE 122

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
            L ++  + P             ++   +L +         E+ ++ + +++  +  G +
Sbjct: 123 SLRELLSLQP-----------ELDDQRRRLAQLYEDIGALPEAADTHLELAQRLIAQGDL 171

Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378
             A  +   A+++ P +     LA   +         
Sbjct: 172 AAALQEVEWALRLVPNQRAARDLATRLREQLGTQPVA 208


>gi|325272910|ref|ZP_08139237.1| response regulator receiver protein [Pseudomonas sp. TJI-51]
 gi|324101954|gb|EGB99473.1| response regulator receiver protein [Pseudomonas sp. TJI-51]
          Length = 535

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 47/173 (27%), Gaps = 19/173 (10%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q A A+  Y  A +   +M  +          +       G+   AQ    +A+ +SP
Sbjct: 211 RGQNAQAQGVYEQALKAFPIMPALYD-------GMAEVLVAQGESKRAQSLLEEAVRLSP 263

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR--------AILLIARSLENA 237
            +      + +  +  +++  A           +                L+   +    
Sbjct: 264 LSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSSRYKDPENNLGLVQALMSKNAGFGL 323

Query: 238 DKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKI 286
           D    +       E  K         + A +  A SL        A  + ++ 
Sbjct: 324 DARTRVEINTTLSEVAKENPEDQGLQVRARMMKAASLQQAGDPETAAKLTDQA 376


>gi|83313535|ref|YP_423799.1| TPR repeat-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82948376|dbj|BAE53240.1| FOG: TPR repeat [Magnetospirillum magneticum AMB-1]
          Length = 566

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 78/243 (32%), Gaps = 7/243 (2%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
            L  LL     +A+ + + A+     M +      FA   L      +   ++A    T 
Sbjct: 302 PLAQLLLADAMVAQGRLDEANALYSAMNRASQPGAFARLKLAVNLDEMKQTDAALSELTS 361

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEW-SRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238
                P++P     +       K +   A  +     +N    +     L  AR +    
Sbjct: 362 LAAEWPESPEALMTMGDVLRRHKRYAEAADAYGAALARNGGSQDARNWSLFYARGIAYER 421

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPHPEIAN 297
                 +  D +E+L+L  +          + + Q     K   ++E+  ++ P+ + A 
Sbjct: 422 AKQWSKAEPDMLEALRLSPDQPDVLNYLGYTWVDQGINVEKGRKLIERAVELRPN-DGAI 480

Query: 298 I----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +    +           +K   R  E+  E       +     ++G   +A  +   AM 
Sbjct: 481 VDSLGWALYRMGEFQAAVKYLERASELKPEDPTVNEHLGDAFWQVGRDTEARYQWQRAMG 540

Query: 354 IAP 356
           + P
Sbjct: 541 LDP 543


>gi|46201076|ref|ZP_00207958.1| COG3118: Thioredoxin domain-containing protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 310

 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 49/131 (37%), Gaps = 4/131 (3%)

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IW 287
            IA + +  ++GD   +     + L+   ++  A     + LI+  +  +AE +L++   
Sbjct: 141 YIAEARQVLEEGDPQTAAGIFNQILQEAPDNASAMAGLLRCLIAVGQTEQAESMLKRLAP 200

Query: 288 KVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
           ++  H +I   A           VG+     R    N +  ++   ++      G  + A
Sbjct: 201 EIARHADIMAVATALELARHAGGVGEAAELRRRLAANADDHQARYDLALAYYAGGETEAA 260

Query: 345 HAKAMLAMKIA 355
             + +   K  
Sbjct: 261 VDELLDLFKRD 271


>gi|300693287|ref|YP_003749260.1| hypothetical protein RPSI07_mp0265 [Ralstonia solanacearum PSI07]
 gi|299075324|emb|CBJ34618.1| conserved hypothethical protein with TPR repeat domain [Ralstonia
           solanacearum PSI07]
          Length = 675

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 13/197 (6%)

Query: 93  MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--P 150
           M + +     A    + +SQQ +     ++  +    A        A       ++    
Sbjct: 30  MLLGSGRFKEAFLAAASISQQESN---PVILNIAAIAAREANDLASADLYWSRCIEQFPQ 86

Query: 151 ATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209
               +     L  E    GD   A+    KA++++PD P     +   Y  ++++  A+ 
Sbjct: 87  DGNAYINRGNLLAE---SGDAEQAEHAYLKAIELNPDTPDAWYNLGNLYSRSRQYQAALG 143

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
              +  K        R  L  +     ++ G    +      +++L      A +     
Sbjct: 144 PYREALKRVA----GRPDLHNSMGCACSELGLTDEALQHLQRAVQLAPRYAEAWLNLGLL 199

Query: 270 LISQNKKRKAEVILEKI 286
                + + A   L+  
Sbjct: 200 HRDTRQLKAAVDALQHA 216


>gi|293607618|ref|ZP_06689952.1| tetratricopeptide TPR_2 [Achromobacter piechaudii ATCC 43553]
 gi|292814051|gb|EFF73198.1| tetratricopeptide TPR_2 [Achromobacter piechaudii ATCC 43553]
          Length = 628

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 66/197 (33%), Gaps = 12/197 (6%)

Query: 93  MSIAAHNIP---LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149
           +++AA N     LA+ + + +           +      ++       +A   L+  L  
Sbjct: 165 LALAAANGQTKGLAQALRNRIDSSR--DKPAAIGQALAVLSRL-NDRRLALRILDESLSD 221

Query: 150 PATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
              +   A  +L   +   GD   A + +  AL   P +    + +++      +  RA 
Sbjct: 222 NVRKLPAAHLALADVASAAGDYERATQESRAALAADPKSEAAAQRLLEYGSKV-DPQRAQ 280

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
           T             + R +L    + + AD GD   +  +     +            A+
Sbjct: 281 TEARAYINRHPNARKVRLML----AGQLADSGDYNGALTELQAMSRRSPEDFDLLFMQAQ 336

Query: 269 SLISQNKKRKAEVILEK 285
                 + ++A+ +L++
Sbjct: 337 LAYKAGQLQQAKTLLQQ 353


>gi|282853624|ref|ZP_06262961.1| tetratricopeptide repeat protein [Propionibacterium acnes J139]
 gi|282583077|gb|EFB88457.1| tetratricopeptide repeat protein [Propionibacterium acnes J139]
          Length = 378

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 6/142 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-EFAVYSLYFESCRIGDLNSAQRYAT 178
            ++  +  + A    +Y  A      + ++        V  +      +G   +A R   
Sbjct: 199 PILREVAAEAAYQAGEYASALNDYRALRRMTGNDNFLPV--IADCERALGRPQAALRLIR 256

Query: 179 KA--LDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +     ++P     +            +   A+  L +  KN K      A L  A +  
Sbjct: 257 EGQEAGLNPAQQIELVLVQAGARRDLGQRDEAVRLLREAVKNLKAPTEATARLHYAYAET 316

Query: 236 NADKGDMIASYHDAIESLKLCD 257
             ++GD+  +    + + +   
Sbjct: 317 LLEEGDIAGAREWFVSAQRHDP 338


>gi|152980597|ref|YP_001353819.1| PilF type IV pilus assembly protein [Janthinobacterium sp.
           Marseille]
 gi|151280674|gb|ABR89084.1| PilF type IV pilus assembly protein [Janthinobacterium sp.
           Marseille]
          Length = 266

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 61/173 (35%), Gaps = 7/173 (4%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N+ RA + +  ++    +G +  +  +   +L+   N   A   AA   + Q + R AE 
Sbjct: 44  NQKRARIRLQLAIGYYQQGQLNVALDEVKLALQTDPNFADAYSMAALIYMDQGETRMAEE 103

Query: 282 ILEKIWKVNPH-PEIANIYT--HLLSENTVGKLKRAL-RLEEINKESVESLVIVSKIA-L 336
             ++  ++ P+ P+++N Y      +      +      L     +S    +  +    L
Sbjct: 104 NFQRALRLAPNDPDLSNNYGWFLCQNGRANQSIPYFEAALRSKTYQSPAKALNNAGACSL 163

Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
            +     A      A +  P        LA++      + ++  ++      A
Sbjct: 164 ILKDTVAAERYFNEAFRHDPGNLTTATNLARL-NYERGDLERARFYINRVTKA 215


>gi|149428672|ref|XP_001516245.1| PREDICTED: similar to hCG2037025 [Ornithorhynchus anatinus]
          Length = 191

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 38/130 (29%), Gaps = 3/130 (2%)

Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                           L    T+E  +      +   GD+++A     +A+ + P     
Sbjct: 32  EVRGDEEDEDAAFPRELLDQ-TKELEMQG--VRAAEAGDVSTALDRFGQAIALLPQRASA 88

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
                Q   L  + + A+  L++    ++   R      + R L     G    +  D  
Sbjct: 89  YNNRAQARRLRADVTGALQDLDRAITLSRGRGRAACQGYVQRGLLARLDGREDDARQDFE 148

Query: 251 ESLKLCDNSI 260
            + +L     
Sbjct: 149 RAARLGSPFA 158


>gi|119945232|ref|YP_942912.1| TPR repeat-containing protein [Psychromonas ingrahamii 37]
 gi|119863836|gb|ABM03313.1| Tetratricopeptide TPR_2 repeat protein [Psychromonas ingrahamii 37]
          Length = 620

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 84/272 (30%), Gaps = 44/272 (16%)

Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162
           A  +    +      N  L   +        +Q   A   L+  +++   +  A+  L  
Sbjct: 80  ATAIEKANTVLKNNPNSGLANEVLGTAYFLNKQQEKAATSLQKAIELEPGQSGALTKLGI 139

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNAK 219
                GD+  A++   KA++I+P   +  +    + +                       
Sbjct: 140 IKMESGDIFEAEKLLLKAIEITPADRFAHQRLGLLYEYQAKD------------------ 181

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
                RAI      LE   +  +  + +      K  + ++  ++   + L+ +     A
Sbjct: 182 ----QRAIHHFQLGLEGTHESYLGVAVNLGRLLNKSGNFAVTIAVLEPRVLLYETNT-DA 236

Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
           +++L   +              L + N +    R   + +      ++L+ ++K      
Sbjct: 237 QMVLATAY--------------LATGNYLDARMRFQHVLQSGLSMPKALLGLAKAQRGES 282

Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371
               A       +K  P       LAQ+E+  
Sbjct: 283 DFSAAMKTINKLVKQKPDSA----LAQMEKGE 310


>gi|15922716|ref|NP_378385.1| hypothetical protein ST2385 [Sulfolobus tokodaii str. 7]
 gi|15623506|dbj|BAB67494.1| 305aa long hypothetical protein [Sulfolobus tokodaii str. 7]
          Length = 305

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 12/156 (7%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           Y+   +  +AI    +  K   + N +R ++    +L      D   +Y    E L    
Sbjct: 49  YLEKGDTKKAIECFEKALK-KAKSNEDRYVINFNLALALFKDKDYNRAYEILRE-LVNTP 106

Query: 258 NSIMASICAAKSLISQNKKR---KAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKR 313
               A    AK  +S    +   +A  ILE      P  ++   Y +L  +      L +
Sbjct: 107 LKTHAQRLLAKVCLSIGDIKHVEEARAILEG--FDEPTEDLIVAYIYLGRNSGRKDYLDK 164

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
           A++  E+    + +  ++++  L     D+      
Sbjct: 165 AVKYAEL----IHNKRLLAEALLSYEDKDKIERALD 196


>gi|308163061|gb|EFO65424.1| Protein F54C1.5 [Giardia lamblia P15]
          Length = 673

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 52/179 (29%), Gaps = 32/179 (17%)

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI--ARSLENADKGD----------MIASY 246
           +  +EW +AI  L  +           ++L      +    D  +              Y
Sbjct: 18  IRDQEWDQAIEILKDQLAQHPGNRAALSLLAFCNYSAGNYEDAVNLYQELCQRHPTSERY 77

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
             A+ + +L       +    ++L  ++    A VI                Y     ++
Sbjct: 78  QLALANARLK------AGMVQEALTIKDDSHNAMVI--------------KAYAKHELDD 117

Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365
           ++G       L +   +      +     L+     +A  +   A+ I P   I+   A
Sbjct: 118 SIGLATLIDALTKRPTDDPCVFCLKGNALLKAEKYTEAIEQYNAALAIKPDPRIYFAKA 176


>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1139

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 83/256 (32%), Gaps = 24/256 (9%)

Query: 137 NIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEA 193
            +A      ML+   T    A+ SL     + G  + A +   +     ++P        
Sbjct: 146 RLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVI-TFNT 204

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-- 251
           ++     A +  RA    ++  +     N        A    +A +G +  ++    E  
Sbjct: 205 LIDACGRAGDIDRARQVFSRLSQAGLSPNDR---TFSALIHSHAVQGQVDEAFSWLQEMR 261

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311
           +  L  N +  S     +     +  +A   L++++     P +    T +   +  GK 
Sbjct: 262 ARGLEPNRVTYSALI-NACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLI---DACGKG 317

Query: 312 KRALRLEEINKESVE--------SLVIVSKIALEMGSIDQAHAKAMLAMK--IAPRKEIF 361
           K      ++ KE  E        +   +    L+   +D A A     +   I P +  +
Sbjct: 318 KELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTY 377

Query: 362 L-LLAQIEQANSHNTD 376
             LL Q  +    +  
Sbjct: 378 TSLLTQCARLGQADRA 393


>gi|170747209|ref|YP_001753469.1| phosphate transporter [Methylobacterium radiotolerans JCM 2831]
 gi|170653731|gb|ACB22786.1| phosphate transporter [Methylobacterium radiotolerans JCM 2831]
          Length = 328

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 18/154 (11%)

Query: 12  SLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAM 71
            L+               I W   +  ++  V+   L F L   ++L     F  + P  
Sbjct: 109 GLLGAGIA----KAGVGVIVWPGVIATSAAIVLSPALGFALGLLLMLAVSWIFVRATPHA 164

Query: 72  LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE------YLVYLL 125
           +  +       +G + +   L S+       A+K    ++     H E       L  +L
Sbjct: 165 VDRLF------RGLQFVSASLYSLGHG-GNDAQKTMGIIAALLYAHGESGAFHVPLWVVL 217

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
             Q A+A          +  M     TR   +  
Sbjct: 218 SCQTAMALGTLLGGWRIVHTM-GSKITRLSPMQG 250


>gi|218781439|ref|YP_002432757.1| hypothetical protein Dalk_3601 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762823|gb|ACL05289.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 425

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 49/167 (29%), Gaps = 11/167 (6%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              E+ +A   L + +KN  +      +L         ++     +       ++   + 
Sbjct: 44  AMGEYRQASNLLEEFRKNNDD---RHYLLDFILGAAYLEQAQPSLAKDQFAACIQKKPDY 100

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWK-VNP-HPEI---ANIYTHLLSENTVGKLKRA 314
           + A    A+         +A    +K +   NP  P++   A         +    L+  
Sbjct: 101 LPALQNLARCWFDLGDMPQAADNYKKAYALSNPKEPDLLYYAAACL-ASGGDYPAALEAF 159

Query: 315 LRLEEINKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
            RL   +      E    + +  ++     ++       ++ A    
Sbjct: 160 RRLMTEHTSQARLEWKEALVQTLIQADEKRESLPVLEEIIREATGDR 206


>gi|149920394|ref|ZP_01908863.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
 gi|149818709|gb|EDM78152.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
          Length = 933

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 81/264 (30%), Gaps = 42/264 (15%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAV---------YSL---YFES-CRIGDLNSA 173
            +          A    E  L     R   +           L     ++   + ++ SA
Sbjct: 526 AKAEQEGGSVQEARRLYE--LSAEEARAAGLVVIAADLELQGLELSLRQANVNLDEVESA 583

Query: 174 QRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
                K +     AP          +      +W +A    ++  +   + +    +   
Sbjct: 584 LELLAKDIHSRRHAPMAAHVEFLRGRIAAKRGDWGQANVHYDRALQLVGKHSLAVPVYWS 643

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-------KKRKAEVIL 283
           A++   ++   +  S     E++         +   A+   +         + RK     
Sbjct: 644 AKASVASESEVLELSARARDEAVARFGAMHPRT---ARYQYNLGLALGPTPEGRKERSDA 700

Query: 284 EKIWKVNPHPEIANIYTHLLSE--------NTVGKL--KRALRLEEINK----ESVESLV 329
           E IW++ P   +A +    L+E            +L  K   R E+ N     +  E L 
Sbjct: 701 EHIWRLFPQAPLAYLALTELAEQALVEGDPEAAKRLAAKAIARFEDTNPSEGADYAELLQ 760

Query: 330 IVSKIALEMGSIDQAHAKAMLAMK 353
           +++K    MG +  A   A LA++
Sbjct: 761 LLAKAETGMGELGLAMELAKLAVR 784


>gi|254238593|ref|ZP_04931916.1| hypothetical protein PACG_04748 [Pseudomonas aeruginosa C3719]
 gi|126170524|gb|EAZ56035.1| hypothetical protein PACG_04748 [Pseudomonas aeruginosa C3719]
          Length = 590

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 8/133 (6%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           LL  ++L     G    +    +E      + +   +  ++ L S  +  +A  +L+   
Sbjct: 204 LLFGKALLLQQDGRPDEALTL-LEDNSASRHEVAPLLLRSRLLQSMKRSDEALPLLKAGI 262

Query: 288 KVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K   HP+     +A     +              L +   +  +    ++ + LE  + D
Sbjct: 263 KE--HPDDKRVRLAYARLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLEAQAWD 320

Query: 343 QAHAKAMLAMKIA 355
           +A       ++  
Sbjct: 321 EARIYLEELVERD 333


>gi|308808203|ref|XP_003081412.1| Inner membrane protein translocase involved in respiratory chain
           assembly (ISS) [Ostreococcus tauri]
 gi|116059874|emb|CAL55581.1| Inner membrane protein translocase involved in respiratory chain
           assembly (ISS) [Ostreococcus tauri]
          Length = 430

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 3/129 (2%)

Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241
           ++    P V  A+ Q Y + K+W ++        +N  +  R RA  L+   +  A  GD
Sbjct: 302 ELGKAHPTVLFALGQTYAVLKDWKKSAITYEYSARNEPDALR-RARALLGAGVARARLGD 360

Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
           +  +     E+ +L  +     I  A +L        A  IL +   +   P+I   Y  
Sbjct: 361 LGMASEALGEANRLNPSDASVKIALASALKLNGDPEGALQILREAATIQ--PDIDERYVK 418

Query: 302 LLSENTVGK 310
            L      +
Sbjct: 419 PLERELASR 427


>gi|167646852|ref|YP_001684515.1| TPR repeat-containing protein [Caulobacter sp. K31]
 gi|167349282|gb|ABZ72017.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter sp. K31]
          Length = 599

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +A+  G  + A  +   A  +     Q H  HN     LL  Q   A +  + A  +   
Sbjct: 23  QAVNLGFKATAVGDAASADALARLDRQTHEVHNHQTAKLL-AQSIHAMQNRDFAKGEKLA 81

Query: 146 MLQIPATREFAVY----SLYFESCRIGDLNSAQRYATKALDISPDA 187
           +  +    +  V      +  E    GD   + R    AL + PD 
Sbjct: 82  LKALERDDKLGVAWHVLGIAREKI--GDFAGSMRCYEAALKLLPDH 125


>gi|300867207|ref|ZP_07111870.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506]
 gi|300334821|emb|CBN57036.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506]
          Length = 725

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 15/122 (12%)

Query: 70  AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL---VYLLE 126
             +      +   +    L   LM+        A  +   + Q        L   + +L 
Sbjct: 68  EAIAQQPQSKARSEARYLLAKDLMA--KGEAAKALTLLERLEQ----DYPILASHIVMLR 121

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q   A  +   A    + +L+       A  +LY          +   +  KA+   P 
Sbjct: 122 AQAYEAAGEAGKAENTWQDLLKRYENDPVAAEALYILGK------TQPEHWDKAIAQFPS 175

Query: 187 AP 188
            P
Sbjct: 176 HP 177


>gi|297834748|ref|XP_002885256.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331096|gb|EFH61515.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 320

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 6/139 (4%)

Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           + SL  +    G+   A +   + +   PD       + +          A     +  +
Sbjct: 125 LRSLLQQKLEKGEDEEALKLLERLVTAQPDETEWKFLMARLLGEMGRPENARQMFEEILQ 184

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASY-HDAI---ESLKLCDNSIMASICAAKSLIS 272
                    A+   A  ++ + +G  +     DA+   E+  L   +    +  A+    
Sbjct: 185 RNPL--SFEALFENALLMDRSGEGAAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFL 242

Query: 273 QNKKRKAEVILEKIWKVNP 291
           Q    +A    E++ K +P
Sbjct: 243 QKNVDEALKSYEQLTKEDP 261


>gi|294637592|ref|ZP_06715873.1| thioredoxin [Edwardsiella tarda ATCC 23685]
 gi|291089245|gb|EFE21806.1| thioredoxin [Edwardsiella tarda ATCC 23685]
          Length = 284

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 54/153 (35%), Gaps = 14/153 (9%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L  A++ E    GDM  +     E+  L       ++  A+ LI+ N+   A  +L    
Sbjct: 116 LKAAQAAELMANGDMAGALPLLKEAHALAPTRSDIALALAEVLIALNRSEDASELLS--- 172

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
               H  + +       ++    L   + L +   ++ E  ++  ++A +   I  A   
Sbjct: 173 ----HIPLQD------QDSHYQSLIAQIELLKQAADTPEIQLLQQQVAEQPQDITLAVQL 222

Query: 348 AMLAMKIAPRKEIFLLLAQ-IEQANSHNTDKIL 379
           A+   ++   +E   LL   +    +       
Sbjct: 223 ALQLHQVGRNEEALTLLMDHLRHDLNAGDGAAR 255


>gi|186473462|ref|YP_001860804.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184195794|gb|ACC73758.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
          Length = 520

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 5/134 (3%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            L + Q      QY+ A   L  +L I      A+ +L + + + GD   A  YA +A  
Sbjct: 8   KLADAQQKFTAGQYDEAAALLNGILSIDPNHNEALEALGYVAAKQGDHARAADYALRAAR 67

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
            +   P           LA   + A+    +      +     A LL   ++     G+ 
Sbjct: 68  PASTTPQQLHFAAHICQLAGRHADALVLFERVLAAFPD----HAELLHGAAMSLVATGEH 123

Query: 243 IASYHD-AIESLKL 255
             +    A  + + 
Sbjct: 124 ERALQRLARLAQRY 137


>gi|148656866|ref|YP_001277071.1| hypothetical protein RoseRS_2749 [Roseiflexus sp. RS-1]
 gi|148568976|gb|ABQ91121.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 615

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 10/190 (5%)

Query: 206 RAITFLNQKKKNAKEWNRNRAI---LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            AI  L Q  +   E  R           R+  N +     ++  D  ++L L  +++ A
Sbjct: 338 AAIGSLGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQSAIDDFTKALALDPDNVEA 397

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRL 317
               A++    N+   A     +  + +P+ ++        Y      +    L    + 
Sbjct: 398 YHQRARAFYRLNQYDAAIRDFTEALERDPNNDVILMRRGVAYRDNRQYDEA--LADFDQS 455

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377
            ++N +   +    + +    G +D+A A    A+ IAP   +  +   + +    +   
Sbjct: 456 LQLNPDVSFTYYHRALLFQATGKLDRARADFDRALTIAPEYRLAFVGRGLLRLEQRDARG 515

Query: 378 ILYWTQSALH 387
            L     A+ 
Sbjct: 516 ALSDCSRAIE 525


>gi|77919630|ref|YP_357445.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77545713|gb|ABA89275.1| TPR-repeat-containing protein [Pelobacter carbinolicus DSM 2380]
          Length = 416

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 4/131 (3%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
            Q AL + + + A E  E  L+       A++     +  +GD   A     KAL + P 
Sbjct: 22  AQRALQQGELDQALELGETWLESHPLDVDAMHLCALAAAGLGDELKALTLYRKALLLEPA 81

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
              +   +       K++ +A++ L +      ++      + +   L+    G    + 
Sbjct: 82  HGPLHHNLGALLEKRKDYLQALSHLRRAMVLQPDFP--EIYINLGNVLDAL--GQSEEAL 137

Query: 247 HDAIESLKLCD 257
               E+++   
Sbjct: 138 AMYREAIRRQP 148


>gi|307947084|ref|ZP_07662419.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4]
 gi|307770748|gb|EFO29974.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4]
          Length = 358

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 58/194 (29%), Gaps = 6/194 (3%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
                AR+   ++ Q      E L    E +    +   + A       L I      A+
Sbjct: 121 GKTEEAREPAEHLLQLLPESVEALTLYAETRARDLQ--SSSAGAAFRKALSIDDRYTPAL 178

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L     R      A   A +A+D+    P     +   Y    E  +A     + +  
Sbjct: 179 LGLSELLTRSNRSKEAVILAQRAVDMDASNPLGYRILGDAYQFTGENDKAYYAFEKARSR 238

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
           A         +++  S     + ++  +   A E  +L  ++         +L +   + 
Sbjct: 239 AP----KDIDIILRLSALQRKRKNVDEALALAREGYRLKPDNKAVVSAIGTALTALGLRS 294

Query: 278 KAEVILEKIWKVNP 291
               +L+   +  P
Sbjct: 295 VGRDVLKYAAEGRP 308


>gi|296120871|ref|YP_003628649.1| RNA polymerase subunit alpha domain protein [Planctomyces
           limnophilus DSM 3776]
 gi|296013211|gb|ADG66450.1| RNA polymerase alpha subunit domain protein [Planctomyces
           limnophilus DSM 3776]
          Length = 451

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 43/150 (28%), Gaps = 9/150 (6%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L          Q + A + +       A R    Y +       GD   A  Y  +A+D+
Sbjct: 125 LKRAGAIRLAGQLDEAEKAVRQSGTEGARRAEYSYQMGCILSDRGDTYGAIEYFERAVDM 184

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P        + +Q  L    + AI    Q               ++   L   D+G+  
Sbjct: 185 DPHHSQALFRLAEQNALYGNDTEAIRLYEQALSRPP----YHLSAMLNLGLLYEDRGNYA 240

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           ++       L    N +      A+  +  
Sbjct: 241 SAAFCFRRILAFDPNHV-----RARMYMKD 265


>gi|271964914|ref|YP_003339110.1| hypothetical protein Sros_3430 [Streptosporangium roseum DSM 43021]
 gi|270508089|gb|ACZ86367.1| hypothetical protein Sros_3430 [Streptosporangium roseum DSM 43021]
          Length = 695

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 47/161 (29%), Gaps = 30/161 (18%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----------------- 207
            R+G    A     +AL +SP  P     +    +   +   A                 
Sbjct: 489 RRLGRNEEAVAAYERALRLSPPFPEAYYNLADARLELGDVPGAVADFVYTIELDPGHVDA 548

Query: 208 ---ITFLNQKKKNAKEWNRNR----------AILLIARSLENADKGDMIASYHDAIESLK 254
              +  L  +  +A+   R            A LL  +    A++GD  A+      +L+
Sbjct: 549 HVNLAGLLHELDDAEAAWRVTTAGLALAPDNAHLLCLKGKLLAERGDADAARDALSAALR 608

Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295
             D    A     +          A   L++  ++   P I
Sbjct: 609 RDDALAEAWAARGELAFEAGDLAGAAGDLDRAVELAGTPAI 649


>gi|289807807|ref|ZP_06538436.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. AG3]
          Length = 280

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|114571477|ref|YP_758157.1| thioredoxin [Maricaulis maris MCS10]
 gi|114341939|gb|ABI67219.1| thioredoxin [Maricaulis maris MCS10]
          Length = 315

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 57/174 (32%), Gaps = 8/174 (4%)

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            + + K  +      L+ R+L + + GD+  +  D    L+       A     +  I  
Sbjct: 130 ARISGKGPSEAELRALVDRALASIEAGDLNGASQDLAAVLQADPGHPGAIGSLVRLWIKA 189

Query: 274 NKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVG--KLKRALRLEEINKESVESL 328
               KA  IL ++      +P  + A     L +   V   +     +    +  + ++ 
Sbjct: 190 GDTDKAASILAQVPADRADDPAIDGARAALELATGAPVDDAETAALRQAVAADSSNFQAR 249

Query: 329 VIVSKIALEMGSIDQAHAKA---MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
             +++  L  G    A  +        +    +    LL ++ +A    +D   
Sbjct: 250 YDLAEALLTGGDHKGAVDQLIAITALDREWNEQAARTLLLKVFEAAGPASDVTR 303


>gi|119177523|ref|XP_001240526.1| hypothetical protein CIMG_07689 [Coccidioides immitis RS]
          Length = 1412

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 64/231 (27%), Gaps = 29/231 (12%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              + + +  A +  E +L+   T    +  L          + A     KAL   P   
Sbjct: 424 TYQSPKNHPEAKQIFEEILKRNQTSTKCLLGLGLIFEEDQGYDQAVALLEKALQRDPKNA 483

Query: 189 WVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
            V   +        E  +A       L   +    ++   +A++L        +      
Sbjct: 484 RVRCELFWCRAHCGELQQATRGLEETLTMIQCEQSQYRDLKAVILYRIGQCQWELDPSPT 543

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +  D   +      SI +++  A +  S                      +   Y     
Sbjct: 544 ARKDRNGAYAKFLGSIQSNMNYAPAYTS----------------------LGIFYADYKK 581

Query: 305 ENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +    + KR   +  E++    E+   +++     G  D   A A   +  
Sbjct: 582 D--QKRAKRCFHKAIELSSSETEAAERLARDFANQGDWDLVEAIAQRVVDS 630


>gi|21242027|ref|NP_641609.1| histidine kinase-response regulator hybrid protein [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|21107427|gb|AAM36145.1| histidine kinase-response regulator hybrid protein [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 651

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 20/204 (9%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 68  RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLLATLRTLLRARR 127

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +      +       A L +  +     +    A+   AI +  L   
Sbjct: 128 AEEALRISEARFREIFEHISAPIAVVDANLHMHEANAAFQRLIGSATPGAAIHAAGLDQA 187

Query: 259 SIMASICAAKSLISQNKKRKAE-------VILEKIWKVNPH--PEIANIYTHLLSENTVG 309
              A++ A  + ++Q ++            + E  W+V+P+  P++  +   L+ + T  
Sbjct: 188 ---AAVHALTTALAQRERWSGTLSLLRDGKLCETEWRVSPYREPDLGLL---LVEDVTEQ 241

Query: 310 KLKRALRLEEINKESVESLVIVSK 333
           +L+   + +E++  + E    +++
Sbjct: 242 RLREREQRQELDTATSELAHQIAQ 265


>gi|16762046|ref|NP_457663.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|16766579|ref|NP_462194.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143535|ref|NP_806877.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|56415213|ref|YP_152288.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62181792|ref|YP_218209.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161616287|ref|YP_001590252.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167552071|ref|ZP_02345824.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167990154|ref|ZP_02571254.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168231890|ref|ZP_02656948.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168237982|ref|ZP_02663040.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168243115|ref|ZP_02668047.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168262708|ref|ZP_02684681.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|168463496|ref|ZP_02697413.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168819650|ref|ZP_02831650.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194445393|ref|YP_002042539.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194447710|ref|YP_002047311.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194470506|ref|ZP_03076490.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194736849|ref|YP_002116231.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197249279|ref|YP_002148208.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197265741|ref|ZP_03165815.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197364143|ref|YP_002143780.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198242195|ref|YP_002217255.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200388379|ref|ZP_03214991.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204928189|ref|ZP_03219389.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205354185|ref|YP_002227986.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858531|ref|YP_002245182.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213052976|ref|ZP_03345854.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. E00-7866]
 gi|213425439|ref|ZP_03358189.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180]
 gi|213579753|ref|ZP_03361579.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-0664]
 gi|213609546|ref|ZP_03369372.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
 gi|213646151|ref|ZP_03376204.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. J185]
 gi|213850432|ref|ZP_03381330.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. M223]
 gi|224585079|ref|YP_002638878.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238910076|ref|ZP_04653913.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|289825795|ref|ZP_06544963.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-3139]
 gi|25302812|pir||AC0901 conserved hypothetical protein STY3462 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421840|gb|AAL22153.1| lipoprotein, cell division [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504349|emb|CAD07801.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139169|gb|AAO70737.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129470|gb|AAV78976.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129425|gb|AAX67128.1| lipoprotein, cell division [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161365651|gb|ABX69419.1| hypothetical protein SPAB_04092 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404056|gb|ACF64278.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194406014|gb|ACF66233.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194456870|gb|EDX45709.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194712351|gb|ACF91572.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195633605|gb|EDX52019.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197095620|emb|CAR61188.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197212982|gb|ACH50379.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197243996|gb|EDY26616.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197289080|gb|EDY28449.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197936711|gb|ACH74044.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199605477|gb|EDZ04022.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204322511|gb|EDZ07708.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205273966|emb|CAR38971.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323240|gb|EDZ11079.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205331216|gb|EDZ17980.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205333882|gb|EDZ20646.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205337877|gb|EDZ24641.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205343471|gb|EDZ30235.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205348476|gb|EDZ35107.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|206710334|emb|CAR34692.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224469607|gb|ACN47437.1| hypothetical protein SPC_3352 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248447|emb|CBG26284.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995477|gb|ACY90362.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159831|emb|CBW19350.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914307|dbj|BAJ38281.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320087728|emb|CBY97492.1| Lipoprotein nlpI homolog Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225965|gb|EFX51019.1| Lipoprotein nlpI precursor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322615286|gb|EFY12207.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618355|gb|EFY15246.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622840|gb|EFY19684.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322626838|gb|EFY23635.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631407|gb|EFY28167.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322635326|gb|EFY32040.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322643461|gb|EFY40024.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322647103|gb|EFY43604.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648906|gb|EFY45351.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655098|gb|EFY51409.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322657701|gb|EFY53969.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664197|gb|EFY60395.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322667480|gb|EFY63642.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322674728|gb|EFY70820.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675639|gb|EFY71712.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322682275|gb|EFY78298.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684878|gb|EFY80876.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322716279|gb|EFZ07850.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131641|gb|ADX19071.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323191727|gb|EFZ76979.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323199034|gb|EFZ84131.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323204266|gb|EFZ89275.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207613|gb|EFZ92560.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323211334|gb|EFZ96178.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214724|gb|EFZ99473.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323221204|gb|EGA05630.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323224055|gb|EGA08348.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230296|gb|EGA14415.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323233272|gb|EGA17366.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239309|gb|EGA23359.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242440|gb|EGA26466.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323246950|gb|EGA30916.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323254117|gb|EGA37937.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255234|gb|EGA39011.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262697|gb|EGA46253.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264007|gb|EGA47515.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269393|gb|EGA52848.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326625032|gb|EGE31377.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326629306|gb|EGE35649.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332990139|gb|AEF09122.1| lipoprotein NlpI [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 294

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHD 248
           +  A    +   +    +N     R I L     +   + D++A Y D
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 159


>gi|1296662|emb|CAA91196.1| plectin [Homo sapiens]
          Length = 4684

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 23/158 (14%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1540 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1599

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1600 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1642

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
              +  R   + L +R    A+          A+E L+L
Sbjct: 1643 ESQRKRQAEVELASRVKAEAEAAREKQRALQALEELRL 1680


>gi|291566701|dbj|BAI88973.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 613

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226
             D  +A     +A+++ P+     +   +     K +  AI   N   +      RN  
Sbjct: 437 QEDYLAALESVARAIELDPNLAQAWQNRGRILASLKRFEEAIAAYNMAVEKG----RNNP 492

Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286
            L  +RS+   +      +   A E++ L  +          +LI+    + A    ++ 
Sbjct: 493 ELWSSRSVALWEAQQYAEAVISAKEAVILNPDFFQGWYNMGTALIALENYQDALFAYQQA 552

Query: 287 WKVNPHPEIANIYT 300
            ++   PE AN + 
Sbjct: 553 TRIQ--PENANAWA 564


>gi|239046722|ref|NP_001141635.2| hypothetical protein LOC100273755 [Zea mays]
 gi|238908843|gb|ACF86758.2| unknown [Zea mays]
          Length = 504

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R GDL +A+     +L  +  +     A++  Y  A     A    ++   +  +     
Sbjct: 75  RAGDLAAARDVFEASLRAASSSVVSWNAMIDGYCRAGRMDAARELFDRMGSSLPDVVTWN 134

Query: 226 AILLIARSLENADKGDMIAS 245
            ++       +  +GD  ++
Sbjct: 135 TMMA-----GHLRRGDPASA 149


>gi|254502217|ref|ZP_05114368.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222438288|gb|EEE44967.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 192

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 6/105 (5%)

Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261
            ++  A+  LN   + A ++    A     R+  +  +G    S  D    L L      
Sbjct: 88  ADYEGALMELNSALETAPDY----AEAWNQRAFIHYLQGKPDRSLEDIERVLALEPRHFG 143

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
           A     + L+ Q + R A+  L +   V  HP I   +  +    
Sbjct: 144 ALSGKGRILMEQGRVRLAQQALREA--VALHPFIPERFLLIREHE 186


>gi|238787598|ref|ZP_04631396.1| hypothetical protein yfred0001_21190 [Yersinia frederiksenii ATCC
           33641]
 gi|238724385|gb|EEQ16027.1| hypothetical protein yfred0001_21190 [Yersinia frederiksenii ATCC
           33641]
          Length = 294

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 70/219 (31%), Gaps = 33/219 (15%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRN---RAILLIA-----------RSLENADKGDMIASYHDA 249
           +  A    +   +    +N     R I L             ++    D  D   S    
Sbjct: 112 FDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRLPLAQDDLQAFYQDDPNDPFRSLWLY 171

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV- 308
           +   ++      A+  A +    ++ + +        W  N    I   Y   +SE T+ 
Sbjct: 172 LVEREIDPK---AAAVALQQRYEKSDRGQ--------WGWN----IVEFYLGTISEKTLM 216

Query: 309 GKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
            +LK  A     + +   E+   + K  L +G  D A A
Sbjct: 217 ERLKADATDNTSLAEHLSETDFYLGKHYLSLGDKDTASA 255


>gi|320103674|ref|YP_004179265.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319750956|gb|ADV62716.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 1034

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 67/224 (29%), Gaps = 36/224 (16%)

Query: 104  RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE----KLEMMLQIPATREFAVYS 159
            ++M      +     + L  +L  +    +     A          +          +Y+
Sbjct: 792  QRMLLAGQLRALRQGDLLSRILVARELERQGDPEAALRELDDTYRSVQMSHDQSLLILYN 851

Query: 160  LYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQQYVLA--------------- 201
                   +G+    +R   K     D +P AP    +++                     
Sbjct: 852  SALIHKALGNPLEEKRLYHKILTFFDANPLAPTQRHSILSAACGNLANLIATSSSHRQDP 911

Query: 202  ----KEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYH 247
                +++  AI   ++  ++A +  R    L              +L      D+  +YH
Sbjct: 912  NDQLRDYDDAIVLYHRAIQHAPDPQRKALWLCNLGGVYTNRSTLSTLAVRRDADLERAYH 971

Query: 248  DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
               ++L L  N   A I  A    + N+  +A   L+   K NP
Sbjct: 972  ALNDALNLNPNLYQARITLAIVFGAINEDDEARRQLDDALKANP 1015


>gi|229818894|ref|YP_002880420.1| transcriptional regulator [Beutenbergia cavernae DSM 12333]
 gi|229564807|gb|ACQ78658.1| transcriptional regulator, winged helix family [Beutenbergia
           cavernae DSM 12333]
          Length = 1049

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 15/165 (9%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
             +   R   +  L   S   GD   A+  A +AL ++ +      A+ +    A     
Sbjct: 87  TDVDTLRLAGLTGLAERSLAGGDATGARDAAREALALAGEPEPAPGALGELRAAAAAQKE 146

Query: 207 AIT-FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
                L        + +    +L  A +    D+G + A      E+     +       
Sbjct: 147 RAAVVLGTALAAGGDHDAALPLLERAAARRPGDEGVLAALLRS--EAAVRGPS------- 197

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310
           AA      ++ R A+ +       +P PE+  ++  L++ +   +
Sbjct: 198 AALERYDAHRTRLADRL-----GTDPGPELQRLHRELIAADRPVR 237


>gi|153004413|ref|YP_001378738.1| protein kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152027986|gb|ABS25754.1| protein kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 784

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 80/243 (32%), Gaps = 35/243 (14%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NA 218
            E    G   +A+    +A+ ++P                + WS A+  +++       +
Sbjct: 531 IEEVDDGKRRAAEAV-ERAIALAPTLGEAYAVRGTIRAAEQRWSEALADMDRAVSLNPGS 589

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQN 274
            +    R   L+            +  Y  A+E ++   +       A      +L++++
Sbjct: 590 ADVYWLRGQFLLG----------PLGRYDAAVEDMRRTADLDPLWPLAWGGLGAALLARD 639

Query: 275 KKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328
           ++ +A  + E+  ++NP      H  +  +     +   +  L+R          S   L
Sbjct: 640 ERAEALRMFERAVELNPGADIGRHMIVVTLLLDGRAAEAIPLLER--------PRSPWRL 691

Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388
              + +   +G   ++       +  A     F + A++  A      +  YW   A  A
Sbjct: 692 QDEALVYHALGDRPRSQRALDALIAEAAGAAAFQI-AEV-YAWRGERARAFYWLDRAF-A 748

Query: 389 MPD 391
             D
Sbjct: 749 QRD 751


>gi|153004702|ref|YP_001379027.1| hypothetical protein Anae109_1840 [Anaeromyxobacter sp. Fw109-5]
 gi|152028275|gb|ABS26043.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 657

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 1/131 (0%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186
                   +   A E    +++I       + +L     R+G  + A ++   AL   PD
Sbjct: 481 AHALRKLGRDEEALEHFRAVVRISPDHVDGMNNLAVHLERLGRTDEAAQWLELALRSKPD 540

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
                  + +  ++      A   L+Q+        R+    L           + +   
Sbjct: 541 HAETYVNLGRLLLVEGRAPEA-AALSQRAIELDPGYRDAYANLSGALNSLGRPDETLRLL 599

Query: 247 HDAIESLKLCD 257
             A + ++   
Sbjct: 600 ESAPQVVQASP 610


>gi|154251602|ref|YP_001412426.1| regulatory protein LuxR [Parvibaculum lavamentivorans DS-1]
 gi|154155552|gb|ABS62769.1| regulatory protein LuxR [Parvibaculum lavamentivorans DS-1]
          Length = 921

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 32/165 (19%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY------------SLYFESCRI 167
            L +L   ++A+   +   A E L+ M+                        L  ++   
Sbjct: 628 ALAFLTMARVAMLRGEEREAEEVLDRMM------YLGHRYNLRRLVIYAKAELVRQATLA 681

Query: 168 GDLNSAQRYATKAL--------DISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKK 216
           GDL+ A+               D+   A       +   +  +LA   + A   L    +
Sbjct: 682 GDLDKARTRFASMGQGENDGEDDLVYFAGETEAQTITEARLLILAGRHADARALLQPAAR 741

Query: 217 NAKEWNRNRAILL--IARSLENADKGDMIASYHDAIESLKL-CDN 258
            A+   R R  L   +  ++    +G + ++    IE+L++   +
Sbjct: 742 KARSQRRMRRFLKLNLLLAISLNVEGQVNSARRALIEALQVGAPD 786


>gi|118588069|ref|ZP_01545479.1| TPR repeat [Stappia aggregata IAM 12614]
 gi|118439691|gb|EAV46322.1| TPR repeat [Stappia aggregata IAM 12614]
          Length = 618

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 65/211 (30%), Gaps = 10/211 (4%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
            + L  GL    +  I  A++ +  V +     N   + LL V           A E ++
Sbjct: 11  REKLVKGLSYHQSGEIEKAQRCYKLVLK-KAPTNPDALNLLGVTYRQL-GSPQKAVEYIQ 68

Query: 145 MMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +     +     +L      IG D  S    + KAL ++P                K+
Sbjct: 69  KAIAQNPKQASFYANLARAMMDIGTDSESMLAVSEKALSLNPAEREALNIKAIALTGLKQ 128

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  A        K+    + N   +     L          +      +  L  +++   
Sbjct: 129 FEAAEEIF----KSLIVAHPNYGEIFTNYGLLLRKSNRYEDALKFFQRAELLAPDNVENC 184

Query: 264 ICAAKSLISQNKKRKAEVILEKI---WKVNP 291
           I  A+  +   +   +   ++K    +K NP
Sbjct: 185 IEQARCRLELKQFDASLEAIDKALERFKDNP 215



 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 78/229 (34%), Gaps = 20/229 (8%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           + G++  AQR     L  +P  P     +   Y       +A+ ++ +           +
Sbjct: 22  QSGEIEKAQRCYKLVLKKAPTNPDALNLLGVTYRQLGSPQKAVEYIQKAIAQNP----KQ 77

Query: 226 AILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
           A      +    D G    S     E +L L      A    A +L    +   AE I +
Sbjct: 78  ASFYANLARAMMDIGTDSESMLAVSEKALSLNPAEREALNIKAIALTGLKQFEAAEEIFK 137

Query: 285 KIWKVNPHPEIANIYTH-----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
               +  HP    I+T+       S      LK   R E +  ++VE+ +  ++  LE+ 
Sbjct: 138 S--LIVAHPNYGEIFTNYGLLLRKSNRYEDALKFFQRAELLAPDNVENCIEQARCRLELK 195

Query: 340 SIDQAHAKAMLAMK--------IAPRKEIFLLLAQIEQANSHNTDKILY 380
             D +      A++        I  +  +   L++  +  ++  + +  
Sbjct: 196 QFDASLEAIDKALERFKDNPLLIHEKARVLFSLSRTHEGLTYAEEAVKG 244


>gi|311277864|ref|YP_003940095.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter
           cloacae SCF1]
 gi|308747059|gb|ADO46811.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter
           cloacae SCF1]
          Length = 294

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 74/225 (32%), Gaps = 33/225 (14%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEW-----NRNRAILLIARSLENADK---------GDMIASYHDA 249
           +  A    +   +    +     NR  A+    R+    D           D   S    
Sbjct: 112 YDAAYEAFDSVLELDPTYNYAYLNRGIALYYGGRAKLAQDDLLAFYQDDPNDPFRSLWLY 171

Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV- 308
           I   KL +     ++ A K    ++         ++ W  N    I   Y   +SE T+ 
Sbjct: 172 IAERKLDEK---QALVALKQRYEKSD--------KEQWGWN----IVEFYLGDISEATLM 216

Query: 309 GKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            +LK  A     + +   E+   + K  L +G  D A A   LA+
Sbjct: 217 DRLKADATDNTSLAEHLSETNFYLGKYYLSLGDKDSAAALFKLAV 261


>gi|307822026|ref|ZP_07652258.1| hypothetical protein MettuDRAFT_0103 [Methylobacter tundripaludum
           SV96]
 gi|307736592|gb|EFO07437.1| hypothetical protein MettuDRAFT_0103 [Methylobacter tundripaludum
           SV96]
          Length = 692

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 6/125 (4%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEW 221
           E     D   A+  A +A+   P        + +      +W RA     N +++   + 
Sbjct: 326 EKLLKHDPQWARELAHEAVRWEPSNHHSWSLLARALEAEGDWRRAEAVYWNARRRFPHDV 385

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
            R+  +          + G+ +       ++ +L  N   A      SL    +   A  
Sbjct: 386 QRHNQLGHALLLHGQEELGETVF-----RQATQLFPNDPFAWSELGHSLRVTGRYESAVA 440

Query: 282 ILEKI 286
           + ++ 
Sbjct: 441 VYKEA 445



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 59/208 (28%), Gaps = 20/208 (9%)

Query: 57  LLFAVSRFFLSCPAMLFHMLHKRNY---DKGY-KALYTGLMSIA----AHNIPLARKMHS 108
           LL  + + F    + L  +  K      D G    L     S       H+   AR++  
Sbjct: 282 LLLRMQKDFAGTRSALIALFDKHRRYAQDSGDSYYLVRSFCSAGEKLLKHDPQWARELAH 341

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-----EMMLQIPATREFAVYSLYFE 163
              +    ++     L   +   AE  +  A              +    +   ++L   
Sbjct: 342 EAVRWEPSNHHSWSLL--ARALEAEGDWRRAEAVYWNARRRFPHDVQRHNQLG-HALLLH 398

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
               G     +    +A  + P+ P+    +     +   +  A+    + ++     N 
Sbjct: 399 ----GQEELGETVFRQATQLFPNDPFAWSELGHSLRVTGRYESAVAVYKEAQQMGFNRNP 454

Query: 224 NRAILLIARSLENADKGDMIASYHDAIE 251
             A  L    L+  D      +   A +
Sbjct: 455 IIANALTDTLLDLNDVVRAETALQWAEQ 482


>gi|289669869|ref|ZP_06490944.1| porphyrin biosynthesis protein [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 421

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 111/361 (30%), Gaps = 31/361 (8%)

Query: 4   LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59
           ++     ++L +     +SH       +V ++ G   Y  +    L +L   L    LL+
Sbjct: 7   VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLMLLIALLVLWLLW 66

Query: 60  AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119
            +             +  K    KG   L  GL +        A ++    S+       
Sbjct: 67  TLISLPF-------RVWGKSRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSG- 118

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYF----ESCRIGDLNS 172
            +     V++A A      A    + + +   T          L      E+    D  +
Sbjct: 119 -IALAAAVRVADARGDDAAATALAQQLAERDPTAYALLQGERHLARQRPVEAINALDSAN 177

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           AQ    + L +       T A+ Q     + + +      Q       ++   A L    
Sbjct: 178 AQPLPARGLLLR------THALTQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQT 231

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            L+ +D   +   +    ++L+     + A +  AA            E  L+  W  + 
Sbjct: 232 LLQASDANALAERWEALAKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDES- 290

Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
              +  +Y  L  E    +   A R      +S   L+ ++++A       QA      A
Sbjct: 291 ---LVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347

Query: 352 M 352
           +
Sbjct: 348 I 348


>gi|182412418|ref|YP_001817484.1| tetratricopeptide TPR_4 [Opitutus terrae PB90-1]
 gi|177839632|gb|ACB73884.1| Tetratricopeptide TPR_4 [Opitutus terrae PB90-1]
          Length = 601

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 60/201 (29%), Gaps = 3/201 (1%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--IL 228
             A+ +  KA+ ++P+       +   Y+   + +RA   L    +  +         + 
Sbjct: 287 QEARAFYEKAVQLAPEDAEAHALLGDLYLKQGDPARARDALEHSLRMPRPGKPPAMLFVN 346

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
           L     E  D    +A     +    +  +   A   A   L    +   A        +
Sbjct: 347 LSQAYRELHDSAQALAIVERGLREASVSFDLHNAHGIALADLGRHEEAIAAYRRGLATQR 406

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
            N         + L+            +   +     ++L ++ ++ +  G   +A    
Sbjct: 407 GNAEINFNLAISLLVLGRGDEAHAHLKQSLTLQPTFPKALALLGRMEMSAGLWREAEQYL 466

Query: 349 MLAMKIAPRK-EIFLLLAQIE 368
               +  P   +   LLA+ E
Sbjct: 467 RPLYEAFPEAPDSHQLLAEWE 487


>gi|57899528|dbj|BAD87042.1| putative P58IPK [Oryza sativa Japonica Group]
          Length = 471

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 69/244 (28%), Gaps = 53/244 (21%)

Query: 122 VYLLEVQIALAERQYNIAHEKLEM-MLQIPATREF-----AVYSLYFESCRIGDLNSAQR 175
             LL  +       +++A    +  +   P   E       + +L  ++    D  +  +
Sbjct: 183 ALLLRGRAYYYLADHDVASRHYQKGLRLDPEHSELKKAYFGLKNLLKKTKSAEDNAAKGK 242

Query: 176 Y---ATK---ALDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKK-KNAKEWNRN 224
               A     AL + PD       +                AI+   +    + +  +  
Sbjct: 243 LRVSAEDYKAALAMDPDHTSYNVHLYLGLCKVLVKLGRGKEAISSCTEALNIDGELVD-- 300

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVI 282
               L  R        D   +  D  E+ +     +    ++  A+  +  +K++    I
Sbjct: 301 ---ALTQRGEAKLLTEDWEGAVQDLKEASQKSPQDMGIREALMRAEKQLKLSKRKDWYKI 357

Query: 283 L-----------EKIWKV---NPHPE---------------IANIYTHLLSENTVGKLKR 313
           L           ++ +K      HP+               IA  Y  L  E+   +  R
Sbjct: 358 LGISKTASAADIKRAYKKLALQWHPDKNVDNREEAENMFREIAAAYEVLGDEDKRVRYDR 417

Query: 314 ALRL 317
              L
Sbjct: 418 GEDL 421


>gi|330999038|ref|ZP_08322763.1| tetratricopeptide repeat protein [Parasutterella excrementihominis
           YIT 11859]
 gi|329575780|gb|EGG57306.1| tetratricopeptide repeat protein [Parasutterella excrementihominis
           YIT 11859]
          Length = 601

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 6/131 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKE 220
             + R+ D+ +A+ +  KA++I P       ++        K    A  ++NQ  +    
Sbjct: 457 MLAERLDDIKTAEFHLKKAIEIDPGFANAYNSLGYTLLEQTKRIKEAERYINQAYQ---- 512

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            +     +L ++      +   I +     ++LKL        +  A+   +Q  KRKA 
Sbjct: 513 LDPRNPYILDSKGWLAFKQKKYIKAIEYLNDALKLQKELD-IYLHLAEVYWTQGNKRKAA 571

Query: 281 VILEKIWKVNP 291
            +L++  K+ P
Sbjct: 572 DVLKEAEKLWP 582



 Score = 36.8 bits (84), Expect = 9.1,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 12/179 (6%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
             Y    +W  A+  L+  K++ +      A L   ++    +      ++     SL  
Sbjct: 387 NIYSRESKWDDALKALDTIKEDQEPAIVEEAALF--KARILLETKGEKTAFDALNASLIS 444

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
              S      AA      +  + AE  L+K  +++  P  AN Y  L     + + KR  
Sbjct: 445 MPYSKALHYEAAMLAERLDDIKTAEFHLKKAIEID--PGFANAYNSL-GYTLLEQTKRIK 501

Query: 316 -------RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
                  +  +++  +   L     +A +     +A      A+K+    +I+L LA++
Sbjct: 502 EAERYINQAYQLDPRNPYILDSKGWLAFKQKKYIKAIEYLNDALKLQKELDIYLHLAEV 560


>gi|323139027|ref|ZP_08074086.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
 gi|322395687|gb|EFX98229.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
          Length = 750

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 38/140 (27%), Gaps = 4/140 (2%)

Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196
             A    + +L +      A+  L       G        A KA  I+P+   +     Q
Sbjct: 68  AEAIRAFQAVLALMPLHIGALNGLAAAYFHQGRREEELEVALKAARIAPEIAGLQVQAAQ 127

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                  W  A       +          A L  A   +  ++ + IA+    IE   L 
Sbjct: 128 LLGNFGRWDEAAAAFQIAQSIDPSVAGTYASL-GATLKQRGEENETIAALQAKIE---LA 183

Query: 257 DNSIMASICAAKSLISQNKK 276
             +    +     L    + 
Sbjct: 184 PGNPELRVDLGHLLFRTRRP 203


>gi|297736398|emb|CBI25121.3| unnamed protein product [Vitis vinifera]
          Length = 2773

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 45/280 (16%)

Query: 100  IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              LA K  ++    H    E                +  A    + M   P     A+  
Sbjct: 1603 GALAEKCRAFAKALHYKEME----------------FEGARS--KKMDANPVAVVEALIH 1644

Query: 160  LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
            +  +  +         YA + LD+     W        Y   + W  A+     K   A 
Sbjct: 1645 INNQLHQHEAAVGILTYAQQNLDVQLKESW--------YEKLQRWDDALKAYTAKASQAS 1696

Query: 220  EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
              +     L++  +L        +A+     E   LC      +  AA+  +       A
Sbjct: 1697 TPH-----LVLEATLGRMRC---LAALARWEELNNLCKEYWTPAEPAARLEM-------A 1741

Query: 280  EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339
             +     W +    ++A+ Y   L +    KL+           S       + + +  G
Sbjct: 1742 PMAANAAWNMGEWDQMAD-YVSRLDDGDETKLRVLGNTTASGDGSSNGTFFRAVLLVRRG 1800

Query: 340  SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
              D+A      A K    +   L+L   E  +   ++ + 
Sbjct: 1801 KYDEAREFVERARKCLATELAALVL---ESYDRAYSNMVR 1837


>gi|224138670|ref|XP_002322872.1| predicted protein [Populus trichocarpa]
 gi|222867502|gb|EEF04633.1| predicted protein [Populus trichocarpa]
          Length = 484

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 80/267 (29%), Gaps = 55/267 (20%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPA-- 151
           +A  +         Y+ ++   + E L  LL  +       +++A +  +  +   P   
Sbjct: 175 LAVQDYSAVISEAGYILKEDENNLEAL--LLRGRAYYYLADHDVATKHYQKGLRLDPEHS 232

Query: 152 ---TREFAVYSLYFESCRIGDLNS------AQRYATKALDISPDAPWVTEAVVQQ----- 197
                 F + +L  ++    D  S      A      AL + P         +       
Sbjct: 233 QLKKAYFGLKNLLKKTKNAEDNASKGKLRVAVEDYRAALALDPHHL-AHNVHLHLGLCKV 291

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            V       A+T  N+      E     A++    +    +  D   +  D   + +   
Sbjct: 292 LVKLGRGKDALTSCNEAL--NIEGELLEALVQRGEAKLIVE--DWEGAVEDLKSAAEKSP 347

Query: 258 NSIMA--SICAAKSLISQNKKR---------KAEVI--LEKIWKV---NPHP-------- 293
             +    ++  A+  +  +K+R         K   +  +++ +K      HP        
Sbjct: 348 QDMSIREALMKAEKALKMSKRRDWYKILGISKTASVSEIKRAYKKLALQWHPDKNVDNRE 407

Query: 294 -------EIANIYTHLLSENTVGKLKR 313
                  +IA  Y  L  ++   +  R
Sbjct: 408 EAEAKFRDIAAAYEVLGDDDKRARYDR 434


>gi|162455027|ref|YP_001617394.1| hypothetical protein sce6745 [Sorangium cellulosum 'So ce 56']
 gi|161165609|emb|CAN96914.1| hypothetical protein sce6745 [Sorangium cellulosum 'So ce 56']
          Length = 1052

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 113/360 (31%), Gaps = 59/360 (16%)

Query: 91  GLMSIAA--HNIPLA---RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           GL  +AA   +   A   R+               L Y    ++   +  +++A   L +
Sbjct: 149 GLARLAALRGDSAAAEGLRREIVAFDALLGSPFPCLAYSEVGRLFAMKADHDVAEAMLRL 208

Query: 146 MLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI-----------SPDAPWV 190
             +     PA +   + +    +   G+   A+    KAL+            SP    V
Sbjct: 209 AAESYRGAPAVQVELLRNQADLALERGEPEVAEPLLVKALEAASARARSAGTPSPRLARV 268

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMIASY 246
            +++ + ++      RA+    +     +E     +   A  L   +L +  +G+   + 
Sbjct: 269 LDSLGRLHLAIGRPDRAVQAFTRALALQEEALGPGHLAAAESLDGLALGHMQRGEPARAA 328

Query: 247 HDAIESLKLCDN-SIMASICAAKSLISQNKKR--------------KAEVILEKIWKVNP 291
                +L + +          A   +     R              +A+  LE+     P
Sbjct: 329 PLLDRALAIREQVLGPGHPATAALRLHLGDLRRATGDDGAAAALYQRAQADLEEA--SGP 386

Query: 292 -HPEIANIYTHL----------LSENTVGKLKRALRLEEI-----NKESVESLVIVSKIA 335
            HP +A                    +    +RAL + E      +    ++L  +++  
Sbjct: 387 DHPAVAEALLRRAALARGGGRPEPGRSEALSQRALAIVEKVFGPRHPRVADALDALAEGH 446

Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ--SALHAMPDPL 393
           L  GSI  A      + +I  R+   LL    E+      + +   T    AL A   P 
Sbjct: 447 LRAGSIPSAAQALARSTEIRDRRAAALLADSSEEQKLAAVEALRGQTDLVLALPAAASPQ 506


>gi|298242464|ref|ZP_06966271.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297555518|gb|EFH89382.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 747

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 87/283 (30%), Gaps = 37/283 (13%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVYLLEVQIALAERQYN 137
           +   A+    ++I   ++    +      +           +  V L++ + AL    + 
Sbjct: 418 RAQIAVGEAQIAIYGGDLHEVERSLQRAQEAIQQNLLAQRIQPQVTLIQGKYALTSGDFA 477

Query: 138 IAHEKLEMM------LQIPATREFAVYSLYFESCRIGDLNSA---QRYATKALDISPDAP 188
            A    E        +Q P     ++  L  +     +L++A      A     +     
Sbjct: 478 QASVLFEQTKTQAQHVQEPLVAARSLLGLGQKQLAEAELDAATETLLAAGHQFQLLESLV 537

Query: 189 WVTEAVVQQY---VLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENADKGDMI 243
               AV+      +    W  A           K+       A  L++R L    K ++ 
Sbjct: 538 GDGSAVLGLAQVSIAKSAWDEASENSEAAITRFKQAGHTPGHADALLSRGLARRGKDELD 597

Query: 244 ASYHDAIESLKL-CDNSIMASIC-----AAKSLISQN-------KKRKAEVILEKIWKVN 290
            +  D  E+L+L         +       A     +N       ++ KA   +E++    
Sbjct: 598 EALSDFEEALRLYHQTRQPLGVVDTRSARASIYFRRNEFDRARDEESKAITQVERVMNTL 657

Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333
             PE  +++     +     L     L ++ ++  E   I+ +
Sbjct: 658 SKPEHWSLFLRQYVD-----LYALTALTDVRQDHDEQARILVE 695


>gi|226939248|ref|YP_002794319.1| TPR repeat protein [Laribacter hongkongensis HLHK9]
 gi|226714172|gb|ACO73310.1| TPR repeat protein [Laribacter hongkongensis HLHK9]
          Length = 580

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 88/264 (33%), Gaps = 7/264 (2%)

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
           AE++Y+ A     ++ +        +Y+L   +    D ++A++    AL      P   
Sbjct: 272 AEKRYDEARASFAVLAKQAPDHPDILYALGILAIEQQDYDTAEQDLQAALQKGYRDPNFI 331

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
              + Q    ++   A +      ++ + +   +  L    + +   +  +      A++
Sbjct: 332 HLTLGQLAEERDQPEAASAHYLAVRSGRHYPAAQGRLAGLEAKQGKLESGLARLEQLALQ 391

Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTV 308
           +           +  A+      ++ +A  +L    K  P   +      +L++     +
Sbjct: 392 TGGKGAEL---EVWRAQLARDAGQRERAYRMLGSALKRYPQSYLLWFERGMLADQLNRPL 448

Query: 309 GKLKRALRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367
              K   +   +  E+  +   +   +A     + +A +    A+   P   + L     
Sbjct: 449 DAEKNLRQALRLEPENAMAQNALGYMLANRGVKLREARSLIEKAVAQEPENGMILDSMGW 508

Query: 368 EQANSHNTDKILYWTQSALHAMPD 391
            +       + L W + A   +PD
Sbjct: 509 VEFRLGRYPQALEWLEKAYRRLPD 532


>gi|237653467|ref|YP_002889781.1| ABC transporter [Thauera sp. MZ1T]
 gi|237624714|gb|ACR01404.1| ABC transporter related [Thauera sp. MZ1T]
          Length = 244

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 6/94 (6%)

Query: 80  NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY----LLEVQIALAERQ 135
              +G + L    ++  A +   AR++     Q+      +L      LL+   A  +  
Sbjct: 108 RRRRGLEMLERVGLADRAGDS--ARQLSGGEQQRLALARAWLTRPRLLLLDEPTASLDPS 165

Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169
            + A E++   ++   TR   V     ++ R+GD
Sbjct: 166 ASAAVERIIREIRTDGTRILMVTHNLGQATRLGD 199


>gi|218462247|ref|ZP_03502338.1| hypothetical protein RetlK5_23468 [Rhizobium etli Kim 5]
          Length = 290

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 117 HNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNS 172
           + E   +L+  Q        +   A E  E +   P T++   + L   +   +  D   
Sbjct: 6   NEEKRAHLIRQQAYAMRMLGESERAKELYEEIEDFPFTKDTRQHLLIELALCYKASDGPR 65

Query: 173 AQRYATKALDISPDAP---WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI-L 228
           A RYA +AL I+            + +Q +   E +R +  L +  +  + +     I L
Sbjct: 66  AMRYAGEALKINRHNSLGFQAQSIIAEQALADHERTRKLIELEKAARRKRFFIVADNIAL 125

Query: 229 LIARSLENADKGDMIAS 245
           ++A   E+ D+   + +
Sbjct: 126 ILAEQTESDDEASALLA 142


>gi|159043883|ref|YP_001532677.1| tetratricopeptide repeat-containing protein [Dinoroseobacter shibae
           DFL 12]
 gi|157911643|gb|ABV93076.1| tetratricopeptide TPR_2 repeat protein [Dinoroseobacter shibae DFL
           12]
          Length = 512

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 69/253 (27%), Gaps = 8/253 (3%)

Query: 109 YVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
              Q   F +  L+ L +    AL E +Y  A      + +         + L     + 
Sbjct: 48  RSLQLDAFKDPELLQLFKDASSALREERYEDAEAAALSLTEKAPDAPQGWHMLGMARVKN 107

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G  + A      A     +                 +  A     +  +   +  R    
Sbjct: 108 GSTSGALHALDAAAARYKNNSDPLVIKGDVLRGLGRFDDAEAAYRRAVEINPDDLRG--- 164

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            +          G    +      +L    + I  ++  A+  ++ +    A   L++  
Sbjct: 165 -VEGLGAMLEAGGKADEAITVYQSALATNPSDIAFALNTARLQVALDDLSAARETLKRFE 223

Query: 288 KVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
             NP     +IA      LS N         +   I  E+    ++ ++  L       A
Sbjct: 224 ASNPENSQVKIALGRVEFLSGNNEAATAYFDQAIRIAPENSTQYLLKARAQLNATEFAAA 283

Query: 345 HAKAMLAMKIAPR 357
                 A +I P 
Sbjct: 284 EETLRGAREIFPD 296


>gi|327537404|gb|EGF24133.1| serine/threonine-protein kinase [Rhodopirellula baltica WH47]
          Length = 1290

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 3/105 (2%)

Query: 154  EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              A   +   S    DL  A     +A  + P   W    +     L+ ++  A+    Q
Sbjct: 959  ALAARGIIHLSAERLDL--AVEDFERANQLDPHHLWAAYGIAACKDLSGQYEEALGLYKQ 1016

Query: 214  KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              K +K      A  L+      A       +      +L+    
Sbjct: 1017 ASKLSKLSEHQ-AACLLGIGRTQAFLRKYSEAAESVQAALETQPG 1060


>gi|326509863|dbj|BAJ87147.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 757

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 21/164 (12%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK------LEMMLQIPA 151
                ARK  + ++++     +  V+L  V        ++ A E        + +L  P 
Sbjct: 372 GKAAEARKAVADMAERRLTPKDKSVFLRLVSTLCKAGDFDGALEVHKKSGQFKHVLVDPR 431

Query: 152 TREFAVYSLYFESCRIGDL-NSAQR----YATKALDISPDAPW----VTEAVVQQYVLAK 202
                 Y +  ES   G   + A +       K   +SP +P         V++      
Sbjct: 432 -----QYGVLMESLCAGGKCDGAVQVLDELLEKGTLLSPKSPVLEAPAYNPVIEYLCNNG 486

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLE-NADKGDMIAS 245
              +A TF  Q  K   +       L+   + E   D    I +
Sbjct: 487 NTDKAETFFRQLMKKGVDDKSAFNSLIRGHAKEGALDAAKEILA 530


>gi|320450080|ref|YP_004202176.1| tetratricopeptide repeat domain-containing protein [Thermus
           scotoductus SA-01]
 gi|320150249|gb|ADW21627.1| tetratricopeptide repeat domain protein [Thermus scotoductus SA-01]
          Length = 355

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 66/209 (31%), Gaps = 15/209 (7%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L  +   +G   +A     +AL   P  P V   + +  +     + A+           
Sbjct: 35  LGVQLYALGRYEAALELFERALKEKPQDPDVVYWLARAQLKVGLLNPALENAKGLVARNP 94

Query: 220 EW-----NRNRAILLIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICAAKSLIS 272
            +       + A + + R+ E+ +KG      +     ++ ++                 
Sbjct: 95  RYIGGYMVLSEAYVALFRASEDREKGKTYLEQALTVLRDAERVNPRYAPLYAQRGLVYAF 154

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVES 327
             +  KAE   +K   +    + A +       +L +      L++  +  +++ +    
Sbjct: 155 LGQADKAEEAFKKALSLQ---DSAEVRAALAELYLAAGRLDEALEQYGKAVQLSPQDGNL 211

Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            V  +   L  G  ++A        ++ P
Sbjct: 212 RVRYASALLVKGRAEEAARVLEEGHRLKP 240


>gi|307293765|ref|ZP_07573609.1| sulfotransferase [Sphingobium chlorophenolicum L-1]
 gi|306879916|gb|EFN11133.1| sulfotransferase [Sphingobium chlorophenolicum L-1]
          Length = 585

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 1/129 (0%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
           L +  IAL + + N A   L   L+       A+  L   + RIG    A++   +AL++
Sbjct: 71  LQQAAIALLDNRLNQAEPILRGRLRDNPFDVAAIRMLAELAGRIGRNADAEKLLRRALEL 130

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
           +P        +        + ++A+  L++  ++            +   L + ++   +
Sbjct: 131 APGFTAARANLATALHRQNKTAQALEQLDR-LQDGFNPAHANLRAAVLGRLGDFEEAITL 189

Query: 244 ASYHDAIES 252
                A  +
Sbjct: 190 YERILAQAA 198


>gi|294627016|ref|ZP_06705606.1| histidine kinase-response regulator hybrid protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292598678|gb|EFF42825.1| histidine kinase-response regulator hybrid protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 651

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 20/204 (9%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 68  RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLLATLRTLLRARR 127

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +      +       A L +  +     +    A+   AI +  L   
Sbjct: 128 AEDALRISEARFREIFEHISAPIAVVDANLHMHEANAAFQRLIGSATPGAAIHAAGLDQA 187

Query: 259 SIMASICAAKSLISQNKKRKAE-------VILEKIWKVNPH--PEIANIYTHLLSENTVG 309
              A++ A  + ++Q ++            + E  W+V+P+  P++  +   L+ + T  
Sbjct: 188 ---AAVHALTTALAQRERWSGTLSLLRDGKLCETEWRVSPYREPDLGLL---LVEDVTEQ 241

Query: 310 KLKRALRLEEINKESVESLVIVSK 333
           +L+   + +E++  + E    +++
Sbjct: 242 RLREREQRQELDTATSELAHQIAQ 265


>gi|238756536|ref|ZP_04617838.1| Cellulose synthase protein C [Yersinia ruckeri ATCC 29473]
 gi|238705242|gb|EEP97657.1| Cellulose synthase protein C [Yersinia ruckeri ATCC 29473]
          Length = 1141

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 76/253 (30%), Gaps = 49/253 (19%)

Query: 91  GLMSIAAHNIPLARKMHSYVSQQHT--FHNEYLVYLLEVQIALA----------ERQYNI 138
           G+    A +   A  +     +  T   +++    L++                   Y  
Sbjct: 295 GMAYARAGDRQKANSLFEQAKKADTNGLNSDKWTSLIKTNRYWLLVNEGDKILKAGNYAQ 354

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A +K +   Q+ ++  +AV  L   +    D  +A+    +AL + P        +   Y
Sbjct: 355 AQQKYQQARQLGSSDSYAVLGLADVAVARHDDKTAEPLYQQALRLDPGNSSAVRGLANIY 414

Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
                  RAI +LN     Q+ K     N  R   L  ++ + A +     +     ++ 
Sbjct: 415 QRQSP-ERAIAYLNGLPPGQQAKMRDTLNGLRLDGLKQQAEKLAAQQHWRQATETYRQAQ 473

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
           K+  + +  +   A++L                     HP+ A+                
Sbjct: 474 KMAPDDVWLTYRLAQALYQDG-----------------HPQDADT--------------E 502

Query: 314 ALRLEEINKESVE 326
             +L        E
Sbjct: 503 FSQLAARKPNDPE 515



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 80/282 (28%), Gaps = 51/282 (18%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-----Q 213
            L   +    D  +A+    +AL + P        +   Y       RAI +LN     Q
Sbjct: 375 GLADVAVARHDDKTAEPLYQQALRLDPGNSSAVRGLANIYQRQSP-ERAIAYLNGLPPGQ 433

Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
           + K     N  R   L  ++ + A +     +     ++ K+  + +  +   A++L   
Sbjct: 434 QAKMRDTLNGLRLDGLKQQAEKLAAQQHWRQATETYRQAQKMAPDDVWLTYRLAQALYQD 493

Query: 274 NKKRKAEVILEKIWKVNP-------------------HPEI--------ANIYTHLLS-- 304
              + A+    ++    P                    P I        A    ++    
Sbjct: 494 GHPQDADTEFSQLAARKPNDPEQVYAYSLYLSGTGRDTPAINHLATLPKAQWSDNIRELD 553

Query: 305 ---------ENTVGKLKR-----ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350
                    EN      R     A+ L           + ++  ALE G  DQA A    
Sbjct: 554 QRLQFERVVENARQIRNRGDETSAIALLRQQPADSRIDLTLADWALERGDYDQALAGYRA 613

Query: 351 AMKIAPRKEIFLLLAQIEQ-ANSHNTDKILYWTQSALHAMPD 391
                P      L  +IE      N         S   A PD
Sbjct: 614 VRTREPNNPDARL-GEIEVLVAQGNVSSARELLHSESVAQPD 654


>gi|224052547|ref|XP_002188588.1| PREDICTED: similar to interferon-induced protein with
           tetratricopeptide repeats 5 [Taeniopygia guttata]
          Length = 495

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 59/209 (28%), Gaps = 25/209 (11%)

Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVL-AKEWSRAITF--LNQKKKNAKEWNRNR 225
             A+    +A+   PD P      A     +    +W R  T   L    K A E N   
Sbjct: 172 ERAKNCFEEAMKSEPDNPDFNAGYATAMYRLEVNSQWYRGETTPCLE-ALKRAVELNPKD 230

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
             L    +L                E L+   +  +    AA     + +  KA  IL+K
Sbjct: 231 TSLAALLALVLQRLHRGHEGERYIQEGLQKTPDFPVFLRHAANFYRKKGEVDKAVEILKK 290

Query: 286 IWKVNP-----HPEIANIY------THLLSENTVGKLKRALRLE--------EINKESVE 326
              + P     H ++   Y            +   ++   ++L         +       
Sbjct: 291 ALALTPKSVVLHHQLGLCYKFKALQLKKTRHSPQEEMANFMQLAIFHFKTVIDKKPVFFY 350

Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           +   ++K        ++A       ++  
Sbjct: 351 AYSDLAKAYAISKRYEEAEEIYQKVLQKN 379


>gi|157368741|ref|YP_001476730.1| lipoprotein NlpI [Serratia proteamaculans 568]
 gi|157320505|gb|ABV39602.1| TPR repeat-containing protein [Serratia proteamaculans 568]
          Length = 294

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 13/209 (6%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  A    +   +    +N  R    + R +     G    +  D +++    D +    
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAR----LNRGIALYYGGRFPLAQDD-LQAFYQDDPNDPFR 166

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTV-GKLKR-ALRL 317
                 +  +   +KA+V L++ +      +    I   Y   +SE T+  +LK  A   
Sbjct: 167 SLWLYLVEREIDPKKADVALQQRYDKANRGQWGWNIVEFYLGNISEKTLMERLKADATDN 226

Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHA 346
             + +   E+   + K  L +G  D A A
Sbjct: 227 TSLAEHLSETDFYLGKHYLSLGDKDTASA 255


>gi|74205492|dbj|BAE21052.1| unnamed protein product [Mus musculus]
          Length = 649

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 79/234 (33%), Gaps = 36/234 (15%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---- 220
             I +   A     +AL+ +P    +   + +  V    +S+AIT+     K+ ++    
Sbjct: 66  MNIQEPEEAIVAYEQALNQNPKDGTLARKIGKALVKTHNYSKAITYYEAALKSGQQNCLC 125

Query: 221 ------------WNRNRAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICA 266
                       + +   +L  + + E   +    M+      + +         +   A
Sbjct: 126 YDLAELLLRLKLYEKAEKVLQHSLAHEPVSELSALMVDGRSQVLLAKVYSKMERPSDAIA 185

Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLE 318
           A     + + R    IL+++    P       H   A I   +   +   +  ++A+   
Sbjct: 186 ALQQARELQAR----ILKRVQMEQPDAVPSQKHFA-AEICAEIAKHSAAQRDYEKAITFY 240

Query: 319 EINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367
                  E+    ++ ++++ L    +D +     L ++     +   +L+A +
Sbjct: 241 REALVHCETDSKIMLELAQLYLAQEDLDASLRHCALLLQRDQDNEPATMLMADL 294


>gi|304311485|ref|YP_003811083.1| hypothetical protein HDN1F_18550 [gamma proteobacterium HdN1]
 gi|301797218|emb|CBL45438.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 600

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 90/317 (28%), Gaps = 49/317 (15%)

Query: 78  KRNYDKGYKALYTGL-MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA--LAER 134
               D+   AL T L  +    +  +A +  S               LL  ++       
Sbjct: 86  AGKRDRADLALSTYLQTAHRTRDPAVAERATSIARYLGADQQALDAALLWAKVDPNNPAA 145

Query: 135 QYNIAHEKLEMMLQIPATR---EFAVYSL------YFESCRIGDLNSAQRYATKALDISP 185
               A   +      PA           +         + R  D  +  R A +  ++  
Sbjct: 146 HEAAATLLIRFNRLDPAMDHIDALLSRGIELNFDFLLNATRHADPQTLSRVAGRLNELVS 205

Query: 186 DAPWVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             P   +           ++ ++ +  +++  +    +       +IA++    ++G   
Sbjct: 206 KYPENAQIWFTRGLIRHEQDNTQGLDDIDRALELEPTYVN----AIIAKARLLEERGGTK 261

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           A+      ++K   +S    +  A+ L+ Q +   A+                       
Sbjct: 262 AARKALAHAVKQQPDSKRLGLSYARLLLRQKRIDDAQ----------------------- 298

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
                   K   RL     E  +  + ++ +A E  +   A  +    +      E    
Sbjct: 299 --------KEFSRLVAQFPEDTDLALSLALVAWENDAEGVAETQLKKLVDTERSNEAHTY 350

Query: 364 LAQIEQANSHNTDKILY 380
           L +I  A   N++ +  
Sbjct: 351 LGRIAAAQHRNSEAVEQ 367


>gi|260944208|ref|XP_002616402.1| hypothetical protein CLUG_03643 [Clavispora lusitaniae ATCC 42720]
 gi|238850051|gb|EEQ39515.1| hypothetical protein CLUG_03643 [Clavispora lusitaniae ATCC 42720]
          Length = 595

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 4/195 (2%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154
           I A     A  +  + + Q    +   VY    Q+         A        ++     
Sbjct: 356 INADKASFAEAIADFETAQKISPDCADVYYHLGQLYYLTSDLTKAEANFLKTKELNPENL 415

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT--FLN 212
           +A   L   + + G+   AQ    +A      +P V     +      +   AI    + 
Sbjct: 416 YAYIQLACITYKKGNFEEAQAAFKEARLKFATSPEVLNYYGEILADHGDIKEAIKQYEIA 475

Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICAAKSL 270
            + + A +     A+ LI ++   + +G      +     ++ +L   S  A +  A+  
Sbjct: 476 ARLQEALKTFNVGAVPLINKASLLSREGPDRLAEAEELLTKACELDPKSETARVSLAQVK 535

Query: 271 ISQNKKRKAEVILEK 285
           +  +K  +A  + E+
Sbjct: 536 LQTDKPEEAISLFEE 550


>gi|295657327|ref|XP_002789233.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01]
 gi|226284001|gb|EEH39567.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01]
          Length = 524

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 12/185 (6%)

Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  L       A    +  +         +           +G    A 
Sbjct: 29  DTPLSSLISTAKTHLKNGAPQDALPYFDAAISRDPANYLTIFQRG--ATYLSLGKSAKAL 86

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIAR 232
           +   + L I PD         +  +   +W+ A   L    KN        + A      
Sbjct: 87  QDFNEVLKIKPDFEGALLQRARLNMKTADWAAAKKDLVAAGKNTAAEIAELDEAQGAARL 146

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-----AEVILEKIW 287
           +     KGD  A    +  ++     S+      A     + + ++     A V+L    
Sbjct: 147 AQAAEKKGDWEACVSQSGVAIMKAPQSLPLRQLRAHCRFERGEIQEGIGDLAHVLLMAPG 206

Query: 288 KVNPH 292
            V PH
Sbjct: 207 SVEPH 211


>gi|196232461|ref|ZP_03131314.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223533|gb|EDY18050.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 760

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 11/222 (4%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199
                 +L +      A + L   + + G  + A  Y  +AL I P        +   Y 
Sbjct: 26  EALYRQILAVQPMWVEAWHMLGLLAHQTGRSDLALEYIGRALAIEPRNGAAYSNLGLVYR 85

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
                  A+    +  +           L    +      G +  +     ++++L  + 
Sbjct: 86  SLGRVDEAMEAYRRALQLQPALPEPYHNL----ANLLRQTGRLNEAVGWLQQAIRLRPHG 141

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRA 314
           +         L +  +K +A    ++  ++N  P  A  Y +L +     +     +   
Sbjct: 142 VELHKNLGDVLSAAGRKDEAIAAYQEAIRLN--PNFAEAYNNLGNILRGERRLSEAITVF 199

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
              + +  +S E    ++    + G    A A    A+KI P
Sbjct: 200 GEAQRLLPDSAEIHNNLAAALADDGQFAHADAAYQRALKIKP 241


>gi|149917417|ref|ZP_01905915.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149821754|gb|EDM81150.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 864

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 69/203 (33%), Gaps = 14/203 (6%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
             +      A+    K +  +P        + + ++  K+   A+  + Q  +   + + 
Sbjct: 642 KVKADKSAEARDKLAKIVAAAPTDLEAWTYLTRAHMELKDRDAALGAVRQGIEAVGKEDA 701

Query: 224 NRAILLIARSLENADKGDMIASYHDAIES---LKLCDNSIMASICA------AKSLISQN 274
            R  L + ++      G    +   A +    L+     +   + A       K      
Sbjct: 702 GR--LFLEQAKILFRGGKKRVAATQAGKGWNFLRDRPEGVSTLVLAWAAEETVKLFQRDG 759

Query: 275 KKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331
           + + A  + +++ +V P H +  +      L +         A +  E++  + ++  ++
Sbjct: 760 RAKPALTVAKQLTRVAPTHSDAWVLRASVELRNNRGSDAKASAEKAVELDPNNPKAHELL 819

Query: 332 SKIALEMGSIDQAHAKAMLAMKI 354
            ++ L  G    A      A+++
Sbjct: 820 GQLYLRFGRKTSAREAFEKAVEL 842


>gi|149174501|ref|ZP_01853127.1| hypothetical protein PM8797T_09519 [Planctomyces maris DSM 8797]
 gi|148846611|gb|EDL60948.1| hypothetical protein PM8797T_09519 [Planctomyces maris DSM 8797]
          Length = 399

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 11/201 (5%)

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           PD P       + Y + K++  AI  L+Q  +   ++ R+      A +    +   +  
Sbjct: 63  PDQPRAQLLAGECYFVKKDYPAAIESLSQLNETFPDYRRSS----FALARSYENTAKLAE 118

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +       L    +S  A         +Q + R+ E +LE+  +  P+ +   +Y  L +
Sbjct: 119 AERTLKAHLAAFPDSQEAVTQLQWIYFNQIRLRELENLLERSLETCPN-QFLQLYHLLNT 177

Query: 305 EN----TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360
           E+        +K   R+ E        +  ++    ++G IDQA +    A +  P + +
Sbjct: 178 EHKNPIAQESIKLLNRINEKEPGQPSIMRALAYCHWKLGEIDQAKSYLEAARQAEP-QNV 236

Query: 361 FLLLAQIE-QANSHNTDKILY 380
             LL   E        + +  
Sbjct: 237 ETLLVAFEFYLELGELEAVQQ 257


>gi|290511899|ref|ZP_06551267.1| cellulose synthase subunit BcsC [Klebsiella sp. 1_1_55]
 gi|289775689|gb|EFD83689.1| cellulose synthase subunit BcsC [Klebsiella sp. 1_1_55]
          Length = 1159

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 6/167 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL   Q + A        ++  T  +AV  L   +    +  +A+RY  +AL +      
Sbjct: 362 ALKAGQLSQAQNYYAQAQRVDRTDSYAVLGLGDVAAARKESAAAERYYQQALRLDRGNNL 421

Query: 190 VTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
               +   Y       A  W   +    ++  +  E        L  ++     +G+   
Sbjct: 422 AVRGLANLYRAESPEKASAWIAGLPPAQRRSIDDIE-RSLTNDRLEKQAQALESQGNWAQ 480

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +       L L  +S+  +   A+ L+S  ++++A+ ++  +    P
Sbjct: 481 AAEVQRRRLALDPDSVWITYRLARDLVSAGERQEADALMRAMVNRQP 527


>gi|289425537|ref|ZP_06427314.1| tetratricopeptide repeat protein [Propionibacterium acnes SK187]
 gi|289154515|gb|EFD03203.1| tetratricopeptide repeat protein [Propionibacterium acnes SK187]
          Length = 398

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 44/142 (30%), Gaps = 6/142 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-EFAVYSLYFESCRIGDLNSAQRYAT 178
            ++  +  + A    +Y  A      + ++        V  +      +G   +A R   
Sbjct: 219 PILREVAAEAAYQAGEYASALNDYRALRRMTGNDNFLPV--IADCERALGRPQAALRLIR 276

Query: 179 KALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +  +   +     E V+          +   A+  L +  KN K      A L  A +  
Sbjct: 277 EGQEAGLNPAQQIELVLVQAGARRDLGQRDEAVRLLREAVKNLKAPTEATARLHYAYAET 336

Query: 236 NADKGDMIASYHDAIESLKLCD 257
             ++GD   +    + + +   
Sbjct: 337 LLEEGDTAGARKWFVSAQRHDP 358


>gi|260662128|ref|ZP_05863024.1| TPR repeat-containing protein [Lactobacillus fermentum 28-3-CHN]
 gi|260553511|gb|EEX26403.1| TPR repeat-containing protein [Lactobacillus fermentum 28-3-CHN]
          Length = 420

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 94/256 (36%), Gaps = 30/256 (11%)

Query: 133 ERQYNIAHE--KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           E   + A +     +      T    +YSL  E   +G  N AQR   K LD  P    +
Sbjct: 13  EGTMDQAQKDFAWALRKDDDDT----LYSLAEELYALGLTNQAQRTYLKLLDRYPQEDEL 68

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             A+ +  +   +   A+++L+Q + ++  +   +++L+ A   +  ++ ++  +     
Sbjct: 69  RTALAEIAIDNGDNDEALSYLSQIQPSSPAY--LQSLLVQADLYQTEEQFEITEA--KLN 124

Query: 251 ESLKLCDNSIMASICA-AKSLISQNKKRKAE----VILEKIWKVNPHPEIANIYTHLLSE 305
           E+ ++  +   A + A A+      K ++A      +++       H E A +       
Sbjct: 125 EAYRMAPD-EPAVLFALAEYYYLIGKFQEAIPFYFALIKAG-----HLEFAKVDIAGRLG 178

Query: 306 NTVGKLKRALR----LEEINKESVESLVI----VSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +L +  +    L ++      S +     ++++AL             LA      
Sbjct: 179 TAYAQLGKFDQALGYLNQVAPGYQTSDIRFQTGLTQLALHQLKEAII-TFKELAEDDGQY 237

Query: 358 KEIFLLLAQIEQANSH 373
             ++  LAQ      H
Sbjct: 238 ASVYPALAQAYAEEHH 253


>gi|296811925|ref|XP_002846300.1| s import receptor [Arthroderma otae CBS 113480]
 gi|238841556|gb|EEQ31218.1| s import receptor [Arthroderma otae CBS 113480]
          Length = 623

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 9/193 (4%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q+     +   A +  +  + +     ++   L     ++G + SA     + L    
Sbjct: 408 RAQLHFILGELGEAAKDYQKSIDLDRDFIYSHIQLGVTQYKLGSVASAMATFKRTLKNFE 467

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDM 242
           +   V     +  +  +++S AI   ++     K+ K W+ N   L+         K D 
Sbjct: 468 NVAEVYNYYGELLLDMQKFSEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDF 527

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302
             + +   ++L +  +  +A    A+ L+ Q K  +A    E+        E+A     +
Sbjct: 528 QEAENLCQKALIIDPDCDIAIATLAQLLLQQGKVSQALKYFERA------AELARTEAEV 581

Query: 303 LSENTVGKLKRAL 315
           ++  +  +  RA 
Sbjct: 582 INAVSYAEATRAQ 594


>gi|226973308|gb|ACO94455.1| LuxR-type transcriptional regulator [Streptomyces sp. DSM 21069]
          Length = 951

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 21/222 (9%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAKEWSRAITFLNQKK 215
             + R G L  A R A  A        W          +++ +        A  +L   +
Sbjct: 630 LLALRRGRLADAVRQAETAHARLSGPRWNVSSALALTVLIEAHTAMGNHQTAAKYLETSE 689

Query: 216 KNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLC-------DNSIMASICAA 267
                +  R     L AR   +   G+   +  D  E   L         +     +  A
Sbjct: 690 PPPALFLTRAGLHYLYARGRHHLATGNTYLALSDFQECGTLMRRWNIDTPSLAPWRLGEA 749

Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-- 325
           +  +    +++A  ++EK       P+     +  ++ + +  ++   +   I +++   
Sbjct: 750 EVWLRLGDQKQAARLVEKQLAN---PDAGLTRSRGMTLHALALVQATAKQPPILRDAFRL 806

Query: 326 -ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366
            E+     + A  +  + +A+ +     +  P       LA+
Sbjct: 807 LEAAGARYEAARVLADLSRAYQQLGD-KQARPTARRAWRLAK 847


>gi|218672661|ref|ZP_03522330.1| TPR repeat-containing protein [Rhizobium etli GR56]
          Length = 180

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 11/137 (8%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
             Q   A   ++ A +     L     R +    L ++     D   A    +KA+ ++P
Sbjct: 42  AGQDDQAFNDFDRAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 94

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           ++          Y+   +   A    N    +A E N N A     ++L    +GD   +
Sbjct: 95  NSAEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 150

Query: 246 YHDAIESLKLCDNSIMA 262
                 ++ L      A
Sbjct: 151 ARSYRHAIGLDPKYQPA 167


>gi|161525539|ref|YP_001580551.1| TPR repeat-containing protein [Burkholderia multivorans ATCC 17616]
 gi|189349733|ref|YP_001945361.1| hypothetical protein BMULJ_00872 [Burkholderia multivorans ATCC
           17616]
 gi|160342968|gb|ABX16054.1| TPR repeat-containing protein [Burkholderia multivorans ATCC 17616]
 gi|189333755|dbj|BAG42825.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 639

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 57/234 (24%), Gaps = 39/234 (16%)

Query: 126 EVQIALAERQYNIAHEKLE-MMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
               A    +   A       +   P       ++ +     + G    A     +A+ +
Sbjct: 31  RAYAAHRAGRLAEAEHGYRTALADNPADADALHLFGVLRH--QQGQHAEAADLVGRAVAL 88

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
            P    +   +            AI         A E+      L  A +         +
Sbjct: 89  RPGDAALQLNLGNALKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAA--------L 140

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
             + DA+++ +                                   + H  + N    L 
Sbjct: 141 QRHEDAVDAFRRALRLTPD-------------------------DASIHNNLGNALNALG 175

Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
             +    L    R  E+      +   ++     MG  D+A A    A+   PR
Sbjct: 176 RHD--DALAAFRRALELRPGHAGAHNNLAMALNAMGRADEAIAHFQAAIAAQPR 227


>gi|26987461|ref|NP_742886.1| TPR domain-containing protein [Pseudomonas putida KT2440]
 gi|24982124|gb|AAN66350.1|AE016263_7 TPR domain protein [Pseudomonas putida KT2440]
          Length = 573

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 53/159 (33%), Gaps = 9/159 (5%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           L+  ++L     G    +    +ES    +  +   +  A+ L + ++  +A  +L    
Sbjct: 187 LIFGKALLLNQDGKTEEALEL-LESHPAQNGEVAPILLRARLLQALDRGPEALPLLRGAI 245

Query: 288 KVNPHPE---IANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           + N  P+   +   Y    +  +         + L +   +  E    ++ + LE    D
Sbjct: 246 RDN--PDDKRLRLTYARTLVEQDRIADAKGEFISLVQQYPDDDELRYSLALVCLENKDWD 303

Query: 343 QAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380
           +A       ++     +   L L +I +        +  
Sbjct: 304 EAEGYLQELVERDSYVDAAHLNLGRIHEERHDPAGALRE 342


>gi|39935540|ref|NP_947816.1| o-linked GlcNAc transferase [Rhodopseudomonas palustris CGA009]
 gi|39649393|emb|CAE27915.1| possible o-linked GlcNac transferase [Rhodopseudomonas palustris
           CGA009]
          Length = 556

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 12/166 (7%)

Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256
                ++   A   L+   K   +     A     R+      G    +  DA +++KL 
Sbjct: 77  LRTRQRDLVGAEADLDAAIKANPDA----ADAYTTRANFWNVSGKPERALADADQAIKLD 132

Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT------HLLSENTVGK 310
            N  +A      + +      +A     +  ++ P  E   +Y       H   ++    
Sbjct: 133 PNLPLAHFVRGSAELKLGHDDRAIADYSRAIELRPK-ESGEVYAVRGFAYHRKGDDIRAV 191

Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 L +   E V +L+        +     A A    A+K+AP
Sbjct: 192 ADYTEAL-KAAPEDVGTLLNRGDARRNLRDTAGAAADYSEAIKLAP 236


>gi|121997175|ref|YP_001001962.1| multi-sensor hybrid histidine kinase [Halorhodospira halophila SL1]
 gi|121588580|gb|ABM61160.1| multi-sensor hybrid histidine kinase [Halorhodospira halophila SL1]
          Length = 1266

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 65/209 (31%), Gaps = 48/209 (22%)

Query: 132  AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK-----ALDISPD 186
             E            +LQ  A++          +   GD  +A+R A       A   +  
Sbjct: 1074 LEGD----RAFYRRLLQRFASQLEGELGQLPAALDRGDPETARRVAHTLKGTAATVGATR 1129

Query: 187  APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS--------LENAD 238
                  A V + + A E       L+++ + A +       +L   +        L+   
Sbjct: 1130 LAEAA-AGVDRCLKAGE--SVSDELHRELRAALDEVSAGLEVLADAATTSAPQPPLDATA 1186

Query: 239  KGDMIASYHDAIESLKLCDN-SIMASICAAKSLISQNKKRK------------AEVILEK 285
              + +   + A+ + +L D   + A++   ++L  +   R+            A  +L  
Sbjct: 1187 AREALNRLYTALRANELVDEALVDAALHHLRALSDEATVRRVRQQIDQFDYDAATEVL-- 1244

Query: 286  IWKVNPH----PEIANIYTHLLSENTVGK 310
                 PH    P+ A        E+   +
Sbjct: 1245 ----APHAALTPDSAAS-----GESPPAR 1264


>gi|327542334|gb|EGF28821.1| hypothetical protein RBWH47_05225 [Rhodopirellula baltica WH47]
          Length = 465

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 3/128 (2%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
             L  ++   G +++A  +A  A     D P V   + +       +  AI  L+     
Sbjct: 83  RELAEQALADGRIDAAYNHARVAFRHGADDPLVIFVMARVLGERHRFEEAIAMLDSVAIR 142

Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
             +    R   L   +     KGD   + +     L    +  M     AK  + Q ++ 
Sbjct: 143 DPQA---RLPTLGQTAQWMVLKGDWKQAENRYKAILDEVPDIAMVHEEIAKLYLRQGRRH 199

Query: 278 KAEVILEK 285
            A   + +
Sbjct: 200 DASSHIRQ 207


>gi|327297452|ref|XP_003233420.1| SYF2 splicing factor family protein [Trichophyton rubrum CBS
           118892]
 gi|326464726|gb|EGD90179.1| SYF2 splicing factor family protein [Trichophyton rubrum CBS
           118892]
          Length = 304

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 17/109 (15%)

Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                 ++     +L+R   L+   K +V+S +   + A E               +   
Sbjct: 52  KAEAEDVTSKNQDRLQRFKALQARAKTAVKSNLK--ETAAEAHRFSVDPNALSSISRKHA 109

Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVW 405
                LL A IE A   + ++   W            W +++   S  W
Sbjct: 110 FASHSLLKADIEAA-GEDFERKRAW-----------DWTAEE---SEKW 143


>gi|167753467|ref|ZP_02425594.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
 gi|167658092|gb|EDS02222.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
          Length = 995

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 23/215 (10%)

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEW 204
              +    A   +Y      G+  SA +     L+  P   +  +A+      Y+   E 
Sbjct: 722 SRDSLSFAAARRIYL----SGEPASAAKSLRSYLESYPKGYYTADALYCLSDCYLKTGER 777

Query: 205 SRAITFLNQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA- 262
           SRAI  L       +    +RA+  L   +  +    +  A+Y    ++         A 
Sbjct: 778 SRAIETLAALAGAGQNQYTHRALKTLAGMTFADERFTEAAAAYRKLADAESTAAGKAEAM 837

Query: 263 -----SICAA----KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
                +  AA    + L   +         +  W+ +   + A         +     K 
Sbjct: 838 NGYVRATIAAGDEERILSMADDVASYTAAGDLAWRES---QFAKAGILDRRGDAAAAQKI 894

Query: 314 ALRLEE--INKESVESLVIVSKIALEMGSIDQAHA 346
              L       E  ES   V + A   G   +A  
Sbjct: 895 YKVLSANVKTSEGAESAYRVIESAFRAGDTARAEK 929


>gi|168012472|ref|XP_001758926.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690063|gb|EDQ76432.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 678

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 69/204 (33%), Gaps = 21/204 (10%)

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            +   S R  D   A +    A  + P+  W      +     ++++ A+  L+   +  
Sbjct: 231 GIAKSSLR--DFRGALQALNAANRLQPNDMWTLRLRGRVKRTLRDYTGALKDLDAADRIE 288

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
                N   +L  R +   +  D   +  D  ++ ++   S       A + +   K  +
Sbjct: 289 P----NDLEVLRGRGIVKFNLRDYEGALIDLDKAHRMEPTSSYILRYRADTKLRAGKLDQ 344

Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR---------ALRLEEINKESVESLV 329
           A + ++K        E+ +   HL       KL++           +  E+   +  +L 
Sbjct: 345 ALLDVKKAM------ELDSACAHLYRIRGEVKLRKKDISAAHADLNKALEMQSNNAIALR 398

Query: 330 IVSKIALEMGSIDQAHAKAMLAMK 353
              ++  E+G  + A      A +
Sbjct: 399 ARGELLYELGEYEDALKNLQSADR 422


>gi|153007329|ref|YP_001381654.1| hypothetical protein Anae109_4492 [Anaeromyxobacter sp. Fw109-5]
 gi|152030902|gb|ABS28670.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 279

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 11/170 (6%)

Query: 134 RQYNIAHEKLEMMLQI----PATREFAVY--SLYFESCRIGDLNSAQ-RYATKALDISPD 186
             Y  A      ++ +       RE  V    +Y E  R  D  +A  +YA  A   +P+
Sbjct: 82  GDYTGAISYYRRIVALYPGGKEAREARVQIGDIYRERFR--DPLAAIAQYADVAASDAPE 139

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           AP     V + Y+    WS+A T     ++K       + A LL A++     + D   S
Sbjct: 140 APRYQLEVARAYLELGNWSQARTEARILREKWPDHALADEAQLLAAQAWSLEKRDDSALS 199

Query: 246 YHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPE 294
              A+   +     +  ++   A       +  +A  +  +   ++P+P+
Sbjct: 200 AFQALIDRRPRPELVARALEGQALIHAQAGRFDRALELYAQALPIHPNPD 249


>gi|78065613|ref|YP_368382.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77966358|gb|ABB07738.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 637

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 55/199 (27%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L  A+     AL  +P                 + + A   + +          
Sbjct: 35  AHRAGRLAEAEHGYRNALASNPADADALHLFGVLRHQQGQHAEAADLVGRAVALRP---- 90

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +         G +  +      +L L     +A      +  +  +   A    
Sbjct: 91  GDAALQLNLGNALKALGRLDEAVDRFRNALTLAPEFPLAHYNLGNAYAALQRHDDAIDAF 150

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++ P     H  + N    L   +    L    R  E+      +   ++     M
Sbjct: 151 SRALRLTPDDASIHNNLGNALNALGRHD--DALAAFHRALELRPGHAGAHNNLAMALNAM 208

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D A A    A+   PR
Sbjct: 209 GHADDAIAHFQAAIAAQPR 227


>gi|78061916|ref|YP_371824.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77969801|gb|ABB11180.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 747

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 87/301 (28%), Gaps = 45/301 (14%)

Query: 84  GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143
           GY      L ++  H+  LA    S      +F       L          ++  A +  
Sbjct: 164 GYVKRSDMLRALGRHDEALADCDRSIALAGRSFDAMRGRGL----ALRELGRFRDAVDSY 219

Query: 144 E-MMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV---TEAVVQQ- 197
              + Q+P +T    +  + +   +  D   A      A+  SP        +   ++  
Sbjct: 220 GYALAQMPGSTEVLFLRGVAYLDLQ--DPERALADFNAAIAASPTFIDAIFNSSIALELL 277

Query: 198 -----------YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG------ 240
                       VLA +   A    N+    +       A    AR+L+   +       
Sbjct: 278 GRHDEALVRCDRVLAIDPRHARALANRGNAASHLERYRDAADSYARALDAEPRSTGVLCN 337

Query: 241 ---------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIW 287
                        +      +L L    + A     +  +  ++   A      ++E   
Sbjct: 338 YASALMRIERHDDARDMCDRALALDAGYVPAWFTRGRVQLETHRYEAALDDFARVIEATP 397

Query: 288 KVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
           +    H   AN    L   +     +      EI+ + V +  + + + L +G  +   A
Sbjct: 398 RDKLAHFHQANALRALRQHDAAR--QAYADAIEIDPDYVLAHCMRAFLCLSIGDFEAGWA 455

Query: 347 K 347
           +
Sbjct: 456 E 456


>gi|116620738|ref|YP_822894.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116223900|gb|ABJ82609.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 911

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 82/277 (29%), Gaps = 16/277 (5%)

Query: 94  SIAAHNIPLARKMHSYVSQQHTFHNEYL-----VYLLEVQIALAERQYNIAHEKLEMMLQ 148
           ++    + +AR   +  + Q       L       L        + QY +A       ++
Sbjct: 624 ALGIAYLEMARYDDAAHAFQDAIDRAPLWAYPRHNL--ALAHWQQGQYRLAVADYVAAME 681

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
              T  +  Y+L      +     A     KA+D++P       A+ Q         +A 
Sbjct: 682 KAPTYFYLPYNLGLLYATLNQQKEAGSMYRKAIDLAPGRVEPLTALGQLQASQGSTGKAR 741

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L Q         ++ + +  AR            ++  A+   K   + + +    A+
Sbjct: 742 ENLKQAV---DMTGQSESAMQAARQNYAVLLAKQRKTFDQAVGYWKQNVDYLPSQFSLAE 798

Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSEN---TVGKLKRALRLEEINKES 324
           +     +  KA      I  + P    A +    L+ ++       +            +
Sbjct: 799 AWTKAGEITKAIDSYRHILTLVPSSISARLEVARLMKQDGRPAAEIVAIFHAGLTSAPSN 858

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMK--IAPRKE 359
              L  + +     G +++A      A++    P   
Sbjct: 859 PVLLEQLGRTYQSSGQLEEARQAFASALEHTQDPPAR 895


>gi|322504428|emb|CAM37425.2| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1368

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
            E+ V  ++ A   G    A  +A+ A++I P   +F LLA I ++         +    
Sbjct: 41  FEAHVTAAQNAFLRGDSQAAEQEAVQALRIRPTAHLFALLAVIAESKGKFDQASDFRLLQ 100

Query: 385 ALHA 388
           A  A
Sbjct: 101 AFLA 104


>gi|302675605|ref|XP_003027486.1| hypothetical protein SCHCODRAFT_86041 [Schizophyllum commune H4-8]
 gi|300101173|gb|EFI92583.1| hypothetical protein SCHCODRAFT_86041 [Schizophyllum commune H4-8]
          Length = 738

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 7/137 (5%)

Query: 223 RNRAILLIARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKR 277
           R    L +  +L E  +  D   +      ++++            +  AK  I +    
Sbjct: 379 RRYIFLWLYYALFEEIETKDYDRARQIYETAIRVVPHKQFTFAKLWLMFAKFEIRRLNLP 438

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIA 335
           +A  IL     + P   +   Y  L  +        K   +  E +  +  + +  ++I 
Sbjct: 439 QARKILGTAIGMCPKEALFKGYIELEKDLREFDNVRKLFEKSIEYDPSNSAAWIKYAEIE 498

Query: 336 LEMGSIDQAHAKAMLAM 352
            ++    +A A   L +
Sbjct: 499 TQLQDFARARAIFELGI 515


>gi|213051460|ref|ZP_03344338.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 482

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 2/64 (3%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
           D  ++A   G+ ++ A     A              +E +  L   Q          A  
Sbjct: 260 DPAFRARSQGIAAVNAGEGGNAIAQSQQAVSARQDDSEAVGAL--GQAYSQRGDRARAVA 317

Query: 142 KLEM 145
           + E 
Sbjct: 318 QFEK 321


>gi|115351313|ref|YP_773152.1| cellulose synthase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115281301|gb|ABI86818.1| cellulose synthase operon C domain protein [Burkholderia ambifaria
           AMMD]
          Length = 1315

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 108/342 (31%), Gaps = 29/342 (8%)

Query: 70  AMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126
           A L   L  +     D  Y A   GL ++A  ++  A  + +  +Q      + L     
Sbjct: 291 ATLDRQLDAQRRLERDPDYIAQQRGLQALARGDLAGADPLLARAAQARADDADALGG--L 348

Query: 127 VQIALAERQYNIAHEKLEMML---QIPATREFAV------YSLYFE---SCRIGDLNSAQ 174
             + L E +++ A                +   +      + L  +   +   G    A+
Sbjct: 349 GLLRLREGRHDEARALFTRAAARSTDQRGKWQGLARTAQFWGLLAQGRAAASAGRPQDAE 408

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAKEWNRNRAILL-- 229
           R A  AL + P +P     +V   +  ++W+RA   +  L   +       R  A+L   
Sbjct: 409 RAARAALAMQPASPDAKLQLVDALLAQRDWARAEPLLRELLAARSPTLSAVRGTAMLYEN 468

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQNKKRKAEVILEKIW 287
             R+       D +       +  +  D    A + A  A++L  + ++  A    E   
Sbjct: 469 TGRADRVGPLLDALQGRVTGRDDHRALDGLR-ADLLASQARALADKGERGPAAQRYEAAV 527

Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAH 345
           +  P  P        L  +  + +L R +  + +   ++ E     +     +  +  A 
Sbjct: 528 RAAPDAPWTRFALARLYRDMGLPQLGRTVMDDGLAQSDTPEMRYATALYRNSLDDVAGAQ 587

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387
           A     +  A R +    LA+   A                 
Sbjct: 588 AAL-AGVDDAHRSDGMRALARKLDAEGA-LADARGALGRGDR 627



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 68/280 (24%), Gaps = 34/280 (12%)

Query: 126 EVQIALAERQYNIAHEKLEMML----QIPATREFAVY-----SLYFESCRIGDLNSAQRY 176
           + +    + +   A ++ E  +      P TR           L      + D   AQ  
Sbjct: 506 QARALADKGERGPAAQRYEAAVRAAPDAPWTRFALARLYRDMGLPQLGRTVMDDGLAQSD 565

Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
             +    +       + V            A    ++         +  A   +A +   
Sbjct: 566 TPEMRYATALYRNSLDDVAGAQAALAGVDDA----HRSDGMRALARKLDAEGALADARGA 621

Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296
             +GD  A       +     +            I      +    L   W    HP  A
Sbjct: 622 LGRGDRAAFAASLAHAQASAPDDPDMLAAIGAQWIDAGDPERGLAPLRD-WIAA-HPRDA 679

Query: 297 NIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSK-----------------IALEM 338
           +    L   + +G   R   L    +    E  +  ++                  A+  
Sbjct: 680 DTDVRLRYGDLLGSAGRDDALAAWLDALRREPALTAAQTARIEDQSLRLVLRQTDDAIAR 739

Query: 339 GSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDK 377
               +A      A       K   L LA +E+A  H    
Sbjct: 740 QDYARARTLLGRASDAGRADKRYALELADLERAQGHYDAA 779


>gi|302421780|ref|XP_003008720.1| pre-mRNA-splicing factor prp1 [Verticillium albo-atrum VaMs.102]
 gi|261351866|gb|EEY14294.1| pre-mRNA-splicing factor prp1 [Verticillium albo-atrum VaMs.102]
          Length = 733

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 87/269 (32%), Gaps = 29/269 (10%)

Query: 99  NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV- 157
           N P A+K    ++  H   +E L      +    E     A      +L   AT    + 
Sbjct: 372 NEPRAKKRVIRLALDHIPDSEALWK----EAVNLEEDQTDAR-----LLLAKATEIIPLS 422

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKE--WSRAITFLNQ 213
             L+    R+    +AQ+   KA    P +   W+  A +Q+ + A      RA+  L +
Sbjct: 423 VDLWLALARLETPENAQKVLNKARKAVPTSFEIWIAAARLQEQLGASVNVMKRAVNVLVK 482

Query: 214 KKK--------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265
           +             E       L + +     D   +  +       +K    S+   + 
Sbjct: 483 EAAMPKREEWIAEAEKCEEEGALWMLKGQIYEDLDKLGQAREAYSTGVKAVPASVPLWLL 542

Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HPEI-----ANIYTHLLSENTVGKLKRA-LRLE 318
            A+         KA  +L++     P  P +     A       S  +  + +R    LE
Sbjct: 543 YARLEERAGLVVKARSVLDRARLAVPKSPALWRCPRAACCGASRSGTSRRRTQRKPRSLE 602

Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAK 347
            I K   + ++ V+   L  G      A+
Sbjct: 603 AIKKVDNDPILFVAVARLFWGERKLEKAQ 631


>gi|303282479|ref|XP_003060531.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458002|gb|EEH55300.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 393

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 7/158 (4%)

Query: 72  LFHMLHKRNYDKGYKALYT---GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
           L     +R  + G  A      G +   A +   AR+ +   + Q     EY + LL   
Sbjct: 45  LARHWVERRAELG-CAGAQCVFGYVCEEAGDYERAREWYERAAAQGATLAEYNLGLLYDL 103

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
               ER  + A E                Y  Y       D   A ++  KA        
Sbjct: 104 GLGVERDLSKAAEFYHRAALKGDVHAQHNYG-YLLDRERNDYEGAMKWYEKAAAQGDAQA 162

Query: 189 WVTEAVVQQ--YVLAKEWSRAITFLNQKKKNAKEWNRN 224
                 +      + ++ ++A  +  +   +  E  + 
Sbjct: 163 EHHIGTLYFAGQGVERDEAKAREWWERAAAHGHEVAKE 200


>gi|220915633|ref|YP_002490937.1| transglutaminase domain protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953487|gb|ACL63871.1| transglutaminase domain protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 1431

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 50/161 (31%), Gaps = 11/161 (6%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
              A ++     +     +  +         LA  +   A  ++  +  +          
Sbjct: 630 AADAARLGKRAREVVRGGSPVVALDRTAAALLAAGKVPEALAEMRRLAALHPKEALHHVQ 689

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVT---------EAVVQQYVLAKEWSRAITF 210
           L     R+G    A     +A+ + PD+ W           +AV +      + + A+  
Sbjct: 690 LAAALVRLGFSEQAAAEVRQAIALEPDSAWAHRILGWILQHDAVGRYQGPGHDRAGALAA 749

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
             + K    +    RA L    + E    G   A+  +AIE
Sbjct: 750 YRKAKDLDPDHAGGRAALAELLARE--ANGAPAATIGEAIE 788


>gi|119478500|ref|ZP_01618462.1| hypothetical protein GP2143_11464 [marine gamma proteobacterium
            HTCC2143]
 gi|119448481|gb|EAW29729.1| hypothetical protein GP2143_11464 [marine gamma proteobacterium
            HTCC2143]
          Length = 1340

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 56/182 (30%), Gaps = 16/182 (8%)

Query: 194  VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDMIASY-----H 247
            + + Y+   E ++ I  L     ++       ++L       +  D    + +       
Sbjct: 863  LAEAYINLGEPTKGIEILEAAVADSPTNQTAYSLLFYTYLDNDRFDLATALIARLLEDLE 922

Query: 248  DAIES-LKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE--IANIYTHL 302
               E+          M+++ AA S    N    A   L+ + +  P+  +  +       
Sbjct: 923  ATTEATADQAPWPLQMSAMLAAYS----NDLGAATDQLQALAERYPNDRDVVLKQALIDR 978

Query: 303  LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIF 361
                    L +  R+ E N + +ES V      ++      A  K +   +       + 
Sbjct: 979  WRGWPAQALAKYKRVLEQNGDHLESRVSEVYALMDQREYPLAREKLLGLDREDYNTASVA 1038

Query: 362  LL 363
             L
Sbjct: 1039 AL 1040


>gi|169854603|ref|XP_001833976.1| hypothetical protein CC1G_01653 [Coprinopsis cinerea okayama7#130]
 gi|116505111|gb|EAU88006.1| hypothetical protein CC1G_01653 [Coprinopsis cinerea okayama7#130]
          Length = 1247

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 161  YFESCRIGDLNSAQRYATKALDISP-----------DAPWVTEAVVQQYVLAKEWSRAIT 209
            + ++    DL  A     +AL++ P           +     +A  +Q         AIT
Sbjct: 952  FGQAGTRSDLEEAITLHQEALELRPAPHPGRSSSLNNLANALKARFEQAGTRSNLEEAIT 1011

Query: 210  FLNQ--KKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMA 262
               +  + + A   +R  ++  +A +L    ++   ++   +AI   +       A
Sbjct: 1012 LYREALQLRPAPHPDRPSSLNNLANALKARFEQAGTMSDLEEAIRLHRDALELTPA 1067


>gi|13472042|ref|NP_103609.1| hypothetical protein mll2209 [Mesorhizobium loti MAFF303099]
 gi|14022787|dbj|BAB49395.1| mll2209 [Mesorhizobium loti MAFF303099]
          Length = 658

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 76/235 (32%), Gaps = 23/235 (9%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G  + A     +A+D  PD         +  +   ++++AI  L+Q  +   +  R  
Sbjct: 420 RKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQAIRIGPKSARAH 479

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285
                 R L    K D   +  D  E+++L   +  A      +        KA+   E+
Sbjct: 480 DT----RGLAMVYKADYAGALADYDEAIRLSPKNASAYRNRGIASFYFGPPAKAQADFEQ 535

Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE-----SVESLVIVS----KIAL 336
              + P     + Y  +  +    +  +   L +   +     +    +++     +  L
Sbjct: 536 AAAIKP----GDSYHAIWLDLARRRNGQPSILVDAKLDMTRWPAAVVRLLLGQQTPEATL 591

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
                  A  K+    +          +A+ ++   H+ + +  +  +      D
Sbjct: 592 LAADNPDATKKSEQLCEAN------FYVAEFQRLQHHDEEALRLYRLALGGCPRD 640


>gi|83749859|ref|ZP_00946827.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
           UW551]
 gi|207743932|ref|YP_002260324.1| hypothetical protein RSIPO_02115 [Ralstonia solanacearum IPO1609]
 gi|83723472|gb|EAP70682.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
           UW551]
 gi|206595334|emb|CAQ62261.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 425

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 88/247 (35%), Gaps = 15/247 (6%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + ++  P      R+ A+Y L  +  R G L+ A+  + + L     A  
Sbjct: 84  GETERAIRVHQNLVNRPDLPPNERDHALYELGQDFLRAGLLDRAEE-SLRMLMDGTFAEP 142

Query: 190 VTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               +++ Y + KEW +AI      +    +++    A      + E+  + D+ A+   
Sbjct: 143 AKRVLLELYEVEKEWRKAIDAARELQTLQGQDYTVQIAQFCCELAQESLQRKDVAAAVEW 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIAN----IYTHL 302
              +L+    ++ A+I      + + +   A      I + NP   P +A      Y  L
Sbjct: 203 LERALQENPKNVRATIQLGDVALGKGETEGAIKRWRSIEQQNPAFLPLVAERLMKAYVQL 262

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
                     R      +     E L +V +  L++  ID A A     ++  P      
Sbjct: 263 GRAAEGLAWLRFKMDARLGP---ELLDVVYRYELDVHGIDDAVALMREQIRRQPSLMALT 319

Query: 363 LLAQIEQ 369
            L + E 
Sbjct: 320 RLVEAEA 326


>gi|328780502|ref|XP_397392.4| PREDICTED: tetratricopeptide repeat protein 28-like isoform 1 [Apis
           mellifera]
          Length = 2078

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 26/219 (11%)

Query: 76  LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135
           +H+R  +   +A    L + A   + +A +    + +   FH + L   L  + +    +
Sbjct: 703 MHQRQLNLARQAGDRSLEAAAYGALGIAHRTMKNLDKALGFHTQELT--LRQEASDLRGE 760

Query: 136 YNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
              AH  L    M     T            C    L  A+  A   ++       +  A
Sbjct: 761 -CRAHGNLGAVHMALGQYTHAV--------KCYQEQLERAKELADSGVEAQ-ALGNLGIA 810

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            +        +  AI +  Q+    +      A+L  AR+L N   GD   +  D  E++
Sbjct: 811 RLNM----AHYEDAIGYFEQQLATLEPLTTGTALLNKARALGNL--GDCYEALGDPEEAI 864

Query: 254 K-LCDNSIMASICAA-----KSLISQNKKRKAEVILEKI 286
           K        A+   +     ++     + R+A   L++ 
Sbjct: 865 KCHEQQLTAATKLKSIREQERAYRGLGRAREATGNLQEA 903


>gi|308495398|ref|XP_003109887.1| hypothetical protein CRE_06408 [Caenorhabditis remanei]
 gi|308244724|gb|EFO88676.1| hypothetical protein CRE_06408 [Caenorhabditis remanei]
          Length = 634

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 61/203 (30%), Gaps = 37/203 (18%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GD   A + A K +   P   +  +  +   +   +W+ A+  +       K    
Sbjct: 19  ADTSGDYQKALQAANKLIRKHPKETFAFKCKLVAQIQLSQWADALELI------RKTPAH 72

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               +   ++  +  +G++  +     E      + + A    A+    Q   ++A  I 
Sbjct: 73  QMGHVGFEKAYIHYRQGELDEA---VNELNTCDKDDVKAQELKAQICYKQENFQEAFEIY 129

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----------EINKESVESLVI--- 330
                          Y      +   +L+RA  L           +   +  E       
Sbjct: 130 R--------------YLLKNHSDDSDELRRANYLAVQARLEAQGTKQQVDDAEDSYSQLY 175

Query: 331 -VSKIALEMGSIDQAHAKAMLAM 352
             + + +E   + QA A    A+
Sbjct: 176 NKACVEIEAERLPQALASLEKAL 198


>gi|283780878|ref|YP_003371633.1| hypothetical protein Psta_3109 [Pirellula staleyi DSM 6068]
 gi|283439331|gb|ADB17773.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 298

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 50/174 (28%), Gaps = 14/174 (8%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP 150
           L +       +A  +  Y             YL    I + +   + A       +   P
Sbjct: 105 LAATQHSQGNIAEALAGYSKVIQLDPQFPAAYLSRGNIYIDQGDADRAISDFTTALRLKP 164

Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY------VLAKE 203
             +  F +  +   +    D   A +    A+ ++P         +             +
Sbjct: 165 ESSEAFNLRGVAHGAKNNYDR--ALQDFGSAVRLNP----ANTTALNNRGWMLATCPDDQ 218

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
           +      L    K  +    NR  +L   +   A+ GD  A+     ++L+L  
Sbjct: 219 YRSGKQALADATKACELTKYNRPEILDTLAAAAAETGDFAAAIRWIEKALELVP 272


>gi|170731575|ref|YP_001763522.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169814817|gb|ACA89400.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3]
          Length = 779

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 51/161 (31%), Gaps = 4/161 (2%)

Query: 90  TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM--L 147
             L +        A  + +         +E LV +L      A  + + A E+   +  L
Sbjct: 213 RALSASLHREGRFAEMIEAGFRTVELLPDEVLVRILLADTLRAMNRLSEADEQCTRLYQL 272

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           Q        +  L   + R  D   A     +A++++P A      +    +       A
Sbjct: 273 QPDHQEAMRIRGLVLFALRRTDE--ALAACRRAVELAPGAAAPCGTLGFVLLEMGATQEA 330

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
           I +L +  +     +   + +L   +  +      + + H 
Sbjct: 331 IGWLKRAIEINPTDSVTHSSMLFCIAHSSEFDPQALVAEHR 371


>gi|114320473|ref|YP_742156.1| TPR repeat-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226867|gb|ABI56666.1| Tetratricopeptide TPR_2 repeat protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 533

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 20/151 (13%)

Query: 82  DKGYKAL-YTGLMSIAAHNIPLARKM---HSYVSQQHTFHNEYLVYL------LEVQIAL 131
            +G  AL   G  + A+ ++   R++       +    F +     L      L  ++AL
Sbjct: 367 AQGLAALRSRGPEA-ASGDLQALRRIRDNTPEEATYQFFGHPKQDLLGIAEEILAAEVAL 425

Query: 132 AERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESC-RIGDLNSAQRYATKALD 182
           AE +   A   L   ++         P         +       IGD   A+    +AL 
Sbjct: 426 AEGRDVDAEAALREAVRLEDGLPYSEPEPWPIPARHVLGAVLLEIGDAEEAESVYREALS 485

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
           + PD  W    + Q      + + A      
Sbjct: 486 VHPDNGWALRGLQQSLAAQGKAAEARQVAEA 516


>gi|327306559|ref|XP_003237971.1| DnaJ and TPR domain-containing protein [Trichophyton rubrum CBS
           118892]
 gi|326460969|gb|EGD86422.1| DnaJ and TPR domain-containing protein [Trichophyton rubrum CBS
           118892]
          Length = 521

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 29/111 (26%), Gaps = 15/111 (13%)

Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YS-----LYFESCRIG 168
            +  +  LL   +  LA      A       +    +   ++         L   +    
Sbjct: 28  PDTPVSSLLSSAKTHLASGSPEDALLYFNAAIDKDPSNYLSIFQRGAAYLSLGRHARAAD 87

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           D N       K L + P          +  + +  W+ A   L    K  +
Sbjct: 88  DFN-------KVLKLKPGFEGALLQRGKLRMRSGNWTGAKEDLQAAGKPGE 131


>gi|307105854|gb|EFN54102.1| hypothetical protein CHLNCDRAFT_53482 [Chlorella variabilis]
          Length = 1513

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 13/126 (10%)

Query: 200 LAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
            A+ ++ A+  L+         +   E    R +LL  RSL     GD  A+  DA   L
Sbjct: 31  AAQHYTAALEHLDAAAGPPGMLQAGSEA--LRVMLLSNRSLALFRLGDYAAATEDAQAVL 88

Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEK---IWKVNPHPEIANIYTHLLSENTVGK 310
           +L      A+  AA   ++      A   L          P  ++A  +  L       +
Sbjct: 89  ELQPGLSKAAFRAAAGQLALGDAASAVHRLRAMRCEAGAKPA-DMAAGWVALEVH-AAAR 146

Query: 311 LKRALR 316
           L    R
Sbjct: 147 LAHEER 152


>gi|302840983|ref|XP_002952037.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
           nagariensis]
 gi|300262623|gb|EFJ46828.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
           nagariensis]
          Length = 1509

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---------LAKEWSRAI 208
                 +   GD   A     KA+D++P       A  +              +++ RA 
Sbjct: 829 RGQARSAL--GDHEGALTDLQKAIDLAPLFGGADSASSRAECWMEKGMIYQKMRDYRRAC 886

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268
             L Q  K     ++   +L     L +  +GD+        ++++L      A +   +
Sbjct: 887 RELQQAVKLDPTNSQAWNVL----GLCSTSQGDIRDGVRAYEKAVELNPRLKEAWVNMGQ 942

Query: 269 SLISQNKKRKAEVILEKI 286
           +L  + + ++AE +L K 
Sbjct: 943 ALKEEGRTKEAERVLLKA 960


>gi|89069174|ref|ZP_01156547.1| hypothetical protein OG2516_15654 [Oceanicola granulosus HTCC2516]
 gi|89045347|gb|EAR51413.1| hypothetical protein OG2516_15654 [Oceanicola granulosus HTCC2516]
          Length = 450

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 3/96 (3%)

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA--PRK 358
            L + +          L   +   V +L++ ++ A+ +   D A   A  A + A  P  
Sbjct: 42  RLAAGDPASAAHMTNALIARDDADVPALILRAEAAVALRDYDSAQRAARQAWRQAEVPAA 101

Query: 359 EIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPL 393
                 LA +  A         +W + A    PD  
Sbjct: 102 RYASARLAAVGLAGQERDTLAQFWLRRARQHAPDAA 137


>gi|320106859|ref|YP_004182449.1| transcriptional regulator CadC [Terriglobus saanensis SP1PR4]
 gi|319925380|gb|ADV82455.1| transcriptional regulator, CadC [Terriglobus saanensis SP1PR4]
          Length = 713

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 80/265 (30%), Gaps = 29/265 (10%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           A AE  Y+ A      + Q       A   L      +  L++A       L  +P+A  
Sbjct: 393 ATAEENYDEAARIYATITQRCPHDPEAFRQLAKLQRSLEHLDAANATLQSGLTANPNASS 452

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248
           +        +    +S AI    +  + +  E N +  + +  +       G +  +  +
Sbjct: 453 LFNVKAIVELAQYHYSAAIVSAQEYLRLSPNEPNAHDTLGMTYQQ-----AGKLYQAIAE 507

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHL---- 302
              +L L      A +          +  +A     + +    H + A    Y ++    
Sbjct: 508 FSAALSLDPEFEPAIVHMGDVYFQAGRYEEAIQQYRR-YIGAAHTDAARAIGYGNIAAVY 566

Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
              +N     K A R    +  ++ + ++++        +        +A++ A   +  
Sbjct: 567 RQQQNLKEAAKAAEREIHYDPHAIWNSLVIAVDEKHAAKV----HHYEVALQSARNSQ-- 620

Query: 362 LLLAQIEQANSHNTDKI---LYWTQ 383
                 E+    +   I     W  
Sbjct: 621 ------ERGTPGDRRTIAYQRGWLA 639


>gi|304393049|ref|ZP_07374978.1| putative adenylate cyclase 3 [Ahrensia sp. R2A130]
 gi|303294814|gb|EFL89185.1| putative adenylate cyclase 3 [Ahrensia sp. R2A130]
          Length = 645

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 22/214 (10%)

Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKEWN 222
           SA   A KAL + PD+  +  A++    + + W+          A      +    ++  
Sbjct: 416 SAMVCAEKALQLEPDSAQI-LALLSFCHMTQAWTGWAEDPEKQAAEALRLARLAVNRDDT 474

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282
              A   +  +L     GD+  +      +L+L  N   A    A+     ++   A   
Sbjct: 475 NPNAHFTLGTALSLI--GDVGPALAAERRALELNPNFASALGEIARLSALDDQPEAARRA 532

Query: 283 LEKIWK---VNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336
             +       +PH  +          +  +       A        +      +++    
Sbjct: 533 ALRAIALSPSDPHISLWVYSLALASFVEGDFAAAADFARESAAKRPDWFFHHHLLAASEA 592

Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370
             G+ ++A      + +I P    +  +  +E  
Sbjct: 593 LAGNPERARQAMAESERILP---GYT-MPALEAG 622


>gi|303256343|ref|ZP_07342359.1| putative tetratricopeptide TPR_2 [Burkholderiales bacterium 1_1_47]
 gi|302861072|gb|EFL84147.1| putative tetratricopeptide TPR_2 [Burkholderiales bacterium 1_1_47]
          Length = 597

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 6/131 (4%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKE 220
             + R+ D+ +A+ +  KA++I P       ++        K    A  ++NQ  +    
Sbjct: 453 MLAERLDDIKTAEFHLKKAIEIDPGFANAYNSLGYTLLEQTKRIKEAERYINQAYQ---- 508

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
            +     +L ++      +   I +     ++LKL        +  A+   +Q  KRKA 
Sbjct: 509 LDPRNPYILDSKGWLAFKQKKYIKAIEYLNDALKLQKELD-IYLHLAEVYWTQGNKRKAA 567

Query: 281 VILEKIWKVNP 291
            +L++  K+ P
Sbjct: 568 DVLKEAEKLWP 578


>gi|163795702|ref|ZP_02189667.1| TPR repeat [alpha proteobacterium BAL199]
 gi|159178998|gb|EDP63533.1| TPR repeat [alpha proteobacterium BAL199]
          Length = 808

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 76/250 (30%), Gaps = 53/250 (21%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    + + + N+  AR     V  +       L   L  QI++   +   A        
Sbjct: 13  LSRAQLLVQSGNLTGARHCVRRVLAEDPASTSALT--LAGQISVRADEVRDAVRYFSR-- 68

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
                           +    D  +    A  A +++  A                   A
Sbjct: 69  -------------ASHAEHHSDPRALLNLAR-AEELAGHA-----------------RAA 97

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASIC 265
           +   ++      E  R RA+     +L +   G    +       ++ +L  +  MA   
Sbjct: 98  LATTSRAATLFPEDPRPRALA----ALLHLSTGQPAQALEVLRDGDAGRLDPD--MAYKI 151

Query: 266 AAKS-LISQNKKR---KAEVILEKIWKVNP----HPEIANIYTHLLSENTVGKLKRALRL 317
             +   ++ N+     +A V L +    NP     P + ++      E+   +   A RL
Sbjct: 152 GNRLSALAPNQPSVRDRAMVFLLRA-ASNPGRFLEPALQDLLAIAGPED-RHRYDAARRL 209

Query: 318 EEINKESVES 327
             +N +S E+
Sbjct: 210 LVLNPKSAEA 219


>gi|145342072|ref|XP_001416119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576343|gb|ABO94411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 344

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 29/228 (12%)

Query: 65  FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124
           F +         + R+  +  + L   ++++     P  R+  + V        E +   
Sbjct: 79  FNALERRAKRAYYARDLKRAREDLT-AIIAMEP-ETPEWRERRAQVLVDMKLFEEAIA-- 134

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPAT----------REFAVYSLYFESCRIGDLNSAQ 174
                      Y+ A      M     T          R  A   L      I D + A 
Sbjct: 135 ----------DYDEAERMYRAMYDDATTTYKSLGMLSNRALAYEGLSRWDAAIADYSEAL 184

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR-- 232
           +Y++      P    V  +    Y    E+ +A+   ++     ++       +      
Sbjct: 185 KYSSMMGATPPY---VLNSRGNCYNSIGEYEKALDDYSRAAGIFQQSRNLSGAIYAQSNA 241

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
           +L  A+ G +  +  D  +  +    S+      A    S+ ++++AE
Sbjct: 242 ALMLAELGRIDEAIEDMEKVKRRAAGSVDMRAALAALYWSRGEEQRAE 289


>gi|302185227|ref|ZP_07261900.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae
           642]
          Length = 247

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 2/104 (1%)

Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175
                L  L   Q        N A   LE   ++       +Y L       GD   A++
Sbjct: 144 LDGPVLALLTTAQQQQTSGDLNGASSSLERAQRVAPREPQVLYRLAQVRLAQGDAAQAEQ 203

Query: 176 YATKALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKN 217
            A +AL  +     +  ++  +      K+   A   L ++K  
Sbjct: 204 LARRALTYANGRTSLQASLWGLIAQSREKQGDAAGAALARQKAR 247


>gi|315505182|ref|YP_004084069.1| transcriptional regulator, sarp family [Micromonospora sp. L5]
 gi|315411801|gb|ADU09918.1| transcriptional regulator, SARP family [Micromonospora sp. L5]
          Length = 999

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 111/324 (34%), Gaps = 39/324 (12%)

Query: 62  SRFFLSCPAMLFHMLHKR-NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120
           +RF       L    H+R    +   A   GL +  A N   A+             +  
Sbjct: 664 ARFVWQLTDALRAWFHQRGRRAEWLSAATGGLAAAQAANDLTAQASMHLS---IALAHVT 720

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
                E +  L +     AH++       P  R   + +L     R+G+  +A   A ++
Sbjct: 721 AGRYEEARQHLLDGLRINAHDRW------PEGRTALLNNLSAVHQRLGNPRAAIDCAQQS 774

Query: 181 LDISPDAP-WVTEAVVQQYVLAKEWS-RAITFLNQKKKNAKE------WNRNRAILLIAR 232
           L+++        EA+    +    W   A++  +Q  +NA           N A+LL+  
Sbjct: 775 LELNRQYRNDGGEAMSLANLGFAHWQLGALSQADQHIRNALACAERSGSRYNEAVLLVDL 834

Query: 233 SLENADKGDMIAS---YHDAIESLK-LCDNSIMASICAAKSLI---------SQNKKRKA 279
           +    D+GD  A+   Y  A+ + + L      A+  + ++L+         +    R+A
Sbjct: 835 AGIRRDRGDQEAAEELYDRALVANRDLGYRYGEATALSGRALLWSMTGRAPRACADARQA 894

Query: 280 EVILE-------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI-V 331
             + +       + W    +  +              +L   L  +        S ++ +
Sbjct: 895 VALTQEIGDAGTEAWAREAYGRVLLAAERPAEAAEEHRLALDLARQTRFVWCEASALVGL 954

Query: 332 SKIALEMGSIDQAHAKAMLAMKIA 355
           + + L     D A   A  A+++A
Sbjct: 955 AAVCLATEQPDVAREHAEAALRMA 978


>gi|288933105|ref|YP_003437164.1| cellulose synthase operon C domain protein [Klebsiella variicola
           At-22]
 gi|288887834|gb|ADC56152.1| cellulose synthase operon C domain protein [Klebsiella variicola
           At-22]
          Length = 1159

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 6/167 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL   Q + A        ++  T  +A+  L   +    +  +A+RY  +AL +      
Sbjct: 362 ALKAGQLSQAQNYYAQAQRVDRTDSYAMLGLGDVAAARKESAAAERYYQQALRLDRGNNL 421

Query: 190 VTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
               +   Y       A  W   +    ++  +  E        L  ++     +G+   
Sbjct: 422 AVRGLANLYRAESPEKASAWIAGLPPAQRRSIDDIE-RSLTNDRLEKQAQALESQGNWAQ 480

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +       L L  +S+  +   A+ L+S  ++++A+ ++  +    P
Sbjct: 481 AAEVQRRRLALDPDSVWITYRLARDLVSAGERQEADALMRAMVNRQP 527


>gi|260576247|ref|ZP_05844239.1| TPR repeat-containing protein [Rhodobacter sp. SW2]
 gi|259021515|gb|EEW24819.1| TPR repeat-containing protein [Rhodobacter sp. SW2]
          Length = 579

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 66/248 (26%), Gaps = 41/248 (16%)

Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168
             + +       L  L+     L   + + A    + + +    + F +Y          
Sbjct: 128 AAAAEGRNLGPLLDGLVLAWAELGNGRMSEALAAFDTVAKTEGMQAFGLYH--------- 178

Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228
                     KAL ++                  ++  A   L+ +     +  R   + 
Sbjct: 179 ----------KALALA---------------SVGDFEGADDILSGRASGTLQATRRSLVA 213

Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288
                 +     D I     A E+ +      M +   A   +  +  R A   + +++ 
Sbjct: 214 FAEVLSQLERNADAIELLTKAFEAGQDPAIDAMVARLTAGETLPFDVARNATDGIAEVF- 272

Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348
                  +         +    L       E+  +  E+L++ + +  E G  D A    
Sbjct: 273 ------FSVAAAMQGQADPAFVLLHTRVAGELRPDHTEALLLTAGLLEEQGQHDLATETF 326

Query: 349 MLAMKIAP 356
                  P
Sbjct: 327 AQVPATDP 334


>gi|121594813|ref|YP_986709.1| hypothetical protein Ajs_2472 [Acidovorax sp. JS42]
 gi|120606893|gb|ABM42633.1| Tetratricopeptide TPR_4 [Acidovorax sp. JS42]
          Length = 385

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 90/289 (31%), Gaps = 52/289 (17%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIG----DLNSAQRYATKALDISP 185
            +YN A    E +L         RE A ++L  +  + G      ++ +R    A +   
Sbjct: 85  GEYNRAVRVHEHLLSRGDLSRADRERAQHALALDFLKAGLLDRAEDALRRLEGSAFE--- 141

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                  A++  Y  +++W +A     +       +++   A  L  ++L  A  G++ A
Sbjct: 142 --GQARMALLAIYERSRDWPQASDIARRMHHAQQGDFSTRLAHYLCEQALALAAHGELPA 199

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304
           +     ++L     +  A I  A+    Q +        E  +                 
Sbjct: 200 AQALLEQALATAPQAPRARIELARLQQRQGQP-------EAAFDTL-------------- 238

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364
                        +        +  ++ + A   G   QA A      +  P  ++   +
Sbjct: 239 ---------QALAQAAPAALPLAAPLLVETATATGQAPQAQALLQHHYEDMPSLDLLEAV 289

Query: 365 AQIEQANSHNTDKILYWTQSALHAMPDPL------WISDDGYLSSVWLP 407
             +E AN++       W    L    +P       W++ +      + P
Sbjct: 290 VALEAANANTAAVGREWYVRHLE--REPSLVAATKWLAGETLTHEQFHP 336


>gi|94970642|ref|YP_592690.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552692|gb|ABF42616.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 353

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 58/169 (34%), Gaps = 15/169 (8%)

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
                 A   + +  + A ++    A  L  R+     + D  ++  D   ++K   N  
Sbjct: 158 KGHSDEAEKQVEEALQAAPDY----AAALSFRAALKLTRNDTQSALDDLDHAVKADPNFA 213

Query: 261 MASICAAKSLISQNKKRKAEVILE-------KIWKVNPHPEIANIYTHLLSE-NTVGKLK 312
            A +    +     +  +A   L+       K W+V+   E++  +       + + +L 
Sbjct: 214 QAYMLLGAAFNQLGRYDEALRSLDRGSMYDPKSWQVSY--EMSKAWMGKHDYVHAIQQLN 271

Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361
           R   L  +   + +  ++     +     +QA  +    +   P+ ++ 
Sbjct: 272 RTESLGAVR-IAGQVHLLKGYAFMGQKQFEQAQTELQAYLTSEPQSKMA 319


>gi|94966827|ref|NP_001035605.1| tetratricopeptide repeat protein 36 [Bos taurus]
 gi|122145081|sp|Q3SZV0|TTC36_BOVIN RecName: Full=Tetratricopeptide repeat protein 36; Short=TPR repeat
           protein 36
 gi|74354675|gb|AAI02695.1| Tetratricopeptide repeat domain 36 [Bos taurus]
 gi|296480107|gb|DAA22222.1| tetratricopeptide repeat protein 36 [Bos taurus]
          Length = 188

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 9/124 (7%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           +   GDL++A     +A+++ P+         Q   L  + + A+  L +    +    R
Sbjct: 60  AAEAGDLSTALERFGQAINLLPERASAYNNRAQARRLQGDVAGALEDLERALALSGGRGR 119

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI--------MASICAAKSLIS-QN 274
                 + R L    +G    +  D   + +L               +    + L     
Sbjct: 120 TARQGFVQRGLVARLQGRDDDARRDFERAARLGSPFARRQLVLLNPYAALCNRMLADVMG 179

Query: 275 KKRK 278
           + R+
Sbjct: 180 QLRR 183


>gi|329906688|ref|ZP_08274484.1| Heat shock protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327547183|gb|EGF32044.1| Heat shock protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 391

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 15/169 (8%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            +   A    + +L  P      +  A Y L  +  + G L+ A+    + ++    A  
Sbjct: 84  GETERAIRVHQNLLARPDLPLEHQVHAQYELGQDYLKAGLLDRAEETFNRLVETQYSAQ- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248
              A+++ Y   KEW+RAI      +++     +   A      + +        A+   
Sbjct: 143 ARRALLEIYQREKEWTRAIDAATALQESGAGGRQKEIAQFYCEIAQDELVHTHADAALLV 202

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPH 292
             ++L     ++ A++      +++     A       W+       PH
Sbjct: 203 LDKALLADRKNVRATLLIGDVHLAKGDVEGAL----LAWRRVEQQSVPH 247


>gi|326923707|ref|XP_003208076.1| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 5-like [Meleagris gallopavo]
          Length = 520

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 36/228 (15%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLA------KEWSRAIT 209
                        + A+     AL   P+ P      A+    +        +E + ++ 
Sbjct: 184 QGFALLKFGRKYYDRAKECFENALRKEPNNPEFNAGYAIAMYRLEEFSSRSCEEVNSSLA 243

Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269
            L +      E N     LL   +L+  D   +  +     E ++   +       AAK 
Sbjct: 244 PLKRAL----ELNPMDTYLLALLALKLQDLDQVDEAERCIEEGMQKTPDLPYFLRYAAKF 299

Query: 270 LISQNKKRKAEVILEKIWKVNP------HPEIANIY-THLLSENTVGK------------ 310
              + +  KA+ +LE+  +++P      H ++   Y   L    +  +            
Sbjct: 300 YRRKKELDKAQEVLERALEISPKSTFLLH-QLGLCYRAKLYELKSSTRYPPQDQMEELIQ 358

Query: 311 --LKRALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIA 355
             +     + E   +   S +  ++++  E     +A      A+K+ 
Sbjct: 359 ICISHFKAVTEQKPK-FFSALTDLARMYGEAKMYREAEETFQRALKVN 405


>gi|302831506|ref|XP_002947318.1| hypothetical protein VOLCADRAFT_57174 [Volvox carteri f. nagariensis]
 gi|300267182|gb|EFJ51366.1| hypothetical protein VOLCADRAFT_57174 [Volvox carteri f. nagariensis]
          Length = 1097

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 21/146 (14%)

Query: 94   SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153
            +  A  + +A K++S V Q  T  +E ++              + A      +       
Sbjct: 927  AGKAGQLEIAEKLYSKVRQPDTVTHETMIA-----AYGMAGLPDRAEAVFSALT------ 975

Query: 154  EFAVY-------SLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEW 204
               +         L       GD   A R  T+     + P A  V  A++     A + 
Sbjct: 976  AAGLRPRDFAFCGLIAAHSLAGDWEGAMRVRTRMRRAGVQPSAD-VYNALLAACERAGQP 1034

Query: 205  SRAITFLNQKKKNAKEWNRNRAILLI 230
             +A+  L   +++  E N     LL 
Sbjct: 1035 DKALELLGAMRRDGVEPNALTGQLLS 1060


>gi|229587720|ref|YP_002869839.1| outer membrane protein PgaA [Pseudomonas fluorescens SBW25]
 gi|229359586|emb|CAY46428.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 826

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 10/104 (9%)

Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLE 318
           A    A++  +Q +  +AE +  K     P+    ++    T          ++R   L 
Sbjct: 102 ALATVARTYRNQKQWAQAEAVYRKALLREPNNVDLQLGLALTQADGGKASEAVQRTRALV 161

Query: 319 EINKESVESLVIVSKIALEMG-------SIDQAHAKAMLAMKIA 355
               +     + +       G         DQA  +A    ++A
Sbjct: 162 AAKPDDPNRRMALGYALTRAGLQFDALHEFDQAFIRAGDKPEVA 205


>gi|206561282|ref|YP_002232047.1| tetratricopeptide repeat protein [Burkholderia cenocepacia J2315]
 gi|198037324|emb|CAR53249.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 390

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 6/140 (4%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+    K  D       
Sbjct: 84  GETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALG- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W+++I    + +  + K      A      + +   + +  A+   
Sbjct: 143 AQRALLTIYEIEKDWNKSIDTARRIESMSDKPLGTEIAQFHCELAQDALQRKNAAAAAEQ 202

Query: 249 AIESLKLCDNSIMASICAAK 268
              +L +   ++ A++ +  
Sbjct: 203 LRLALTVNPQNVRATVLSGD 222


>gi|296447904|ref|ZP_06889814.1| Tetratricopeptide TPR_2 repeat protein [Methylosinus trichosporium
           OB3b]
 gi|296254590|gb|EFH01707.1| Tetratricopeptide TPR_2 repeat protein [Methylosinus trichosporium
           OB3b]
          Length = 734

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 92/284 (32%), Gaps = 19/284 (6%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141
            +G K    GL    +     A +      +          Y L   +A        A  
Sbjct: 40  RRGRKHHAKGLEHAKSGRWEQAAREFDAAVK-CAPDQPDFNYALGGALAQL-GHVREAMS 97

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVL 200
             +  L I      A+  L     RIG L+ A       L   PD  +    + +     
Sbjct: 98  AFQRELAILPGDSAALADLGTCLARIGRLDEAILCLQTVLRRRPDMRFAQYNLGLALLTQ 157

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            +    AI  L++  +    +     +  +A +L    +  ++       E+    D+  
Sbjct: 158 KRR-VEAIEALDRSIRLDPTYGDAYRVRGLAHALGGDGEKSVVD-----FEAAAGIDDKN 211

Query: 261 MASICAAKSLISQN-KKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENTVGKLKR 313
             ++ A     S+N +  +A  + E   +V P+  +        +  H   E  +  + R
Sbjct: 212 PDAMIAVGGYFSRNARDLEAGQLFEMAARVAPNIALPQSVFGHYLIAHRRYELGMSFVDR 271

Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           A+ L   +    E+ V      L  G +D+A A    A ++ P 
Sbjct: 272 AISL---DPSLAEAHVARGFGLLGQGRVDEAVAAYRHAAQLRPS 312


>gi|50842884|ref|YP_056111.1| hypothetical protein PPA1402 [Propionibacterium acnes KPA171202]
 gi|50840486|gb|AAT83153.1| conserved protein [Propionibacterium acnes KPA171202]
          Length = 392

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 44/142 (30%), Gaps = 6/142 (4%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-EFAVYSLYFESCRIGDLNSAQRYAT 178
            ++  +  + A    +Y  A      + ++        V  +      +G   +A R   
Sbjct: 213 PILREVAAEAAYQAGEYASALNDYRALRRMTGNDNFLPV--IADCERALGRPQAALRLIR 270

Query: 179 KALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
           +  +   +     E V+          +   A+  L +  KN K      A L  A +  
Sbjct: 271 EGQEAGLNPAQQIELVLVQAGARRDLGQRDEAVRLLREAVKNLKAPTEATARLHYAYAET 330

Query: 236 NADKGDMIASYHDAIESLKLCD 257
             ++GD   +    + + +   
Sbjct: 331 LLEEGDTAGARKWFVSAQRHDP 352


>gi|33592984|ref|NP_880628.1| putative hemin storage protein [Bordetella pertussis Tohama I]
 gi|33572632|emb|CAE42226.1| putative hemin storage protein [Bordetella pertussis Tohama I]
 gi|332382396|gb|AEE67243.1| putative hemin storage protein [Bordetella pertussis CS]
          Length = 661

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 22/225 (9%), Positives = 66/225 (29%), Gaps = 25/225 (11%)

Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214
             +   Y ++ ++ +   A          +P  P+V  +    Y   + +  AI    + 
Sbjct: 138 LGLRGRYADAIKLYEGLRA--------TNTPVHPYVLVSAGNAYAYEERYDEAIVCYEEA 189

Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-------- 266
              A   + +R     +      D+G    +        K     +  +  A        
Sbjct: 190 LAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQLLQRIEKTSPQYVENAPVAERPNEDYA 249

Query: 267 ------AKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLLSENTVGKLKRALRLEE 319
                 A+ L+   +     + ++ +    P    + N        +   +  +A     
Sbjct: 250 TAQRLRAQYLMYSGETEAGTLAIDALQHDAPFSSGLRNAAASARLGDARPREAKAAFTTA 309

Query: 320 I--NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
           +    + ++++  +++ ++ +    +A A      +  P      
Sbjct: 310 LAERPDDIQAMTGLARASMALREYPEAEAIVTTLSERFPESSSVR 354


>gi|325924817|ref|ZP_08186252.1| PAS domain S-box [Xanthomonas perforans 91-118]
 gi|325544747|gb|EGD16095.1| PAS domain S-box [Xanthomonas perforans 91-118]
          Length = 651

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 20/204 (9%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +   P T    V  +   S   GD+ +       A  I P  P V  A ++  + A+ 
Sbjct: 68  RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLLATLRTLLRARR 127

Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A+     + +      +       A L +  +     +    A+   AI +  L   
Sbjct: 128 AEEALRVSEARFREIFEHISAPIAVVDANLHMHEANAAFQRLIGSATPGAAIHAAGLDQA 187

Query: 259 SIMASICAAKSLISQNKKRKAE-------VILEKIWKVNPH--PEIANIYTHLLSENTVG 309
              A++ A  + ++Q ++            + E  W+V+P+  P++  +   L+ + T  
Sbjct: 188 ---AAVHALTTALAQRERWSGTLSLLRDGKLCETEWRVSPYREPDLGLL---LVEDVTEQ 241

Query: 310 KLKRALRLEEINKESVESLVIVSK 333
           +L+   + +E++  + E    +++
Sbjct: 242 RLREREQRQELDTATSELAHQIAQ 265


>gi|325983423|ref|YP_004295825.1| TonB-dependent receptor [Nitrosomonas sp. AL212]
 gi|325532942|gb|ADZ27663.1| TonB-dependent receptor [Nitrosomonas sp. AL212]
          Length = 1098

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            LI ++ +  + G +  +       L+   ++  A    A   + QN K +A  +     
Sbjct: 234 ALIHQAGQLLNTGQVEEAQTIIQRVLQQEPDNSDAYALLAVIAVVQNDKDQALGLATAA- 292

Query: 288 KVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
            V  HPE A       Y           LK       ++ +   +   ++++ + +G ++
Sbjct: 293 -VTNHPESAAAHLALSYAQQAHFEIEAALKSVQHAMLLDPQHALAWTRIAELRMSLGELE 351

Query: 343 QAHAKAMLAMKIAP 356
           QA   A  A+++ P
Sbjct: 352 QARQAAQQAVRLNP 365


>gi|323700366|ref|ZP_08112278.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           sp. ND132]
 gi|323460298|gb|EGB16163.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 451

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 20/152 (13%)

Query: 166 RIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           R  D + A +  + AL++        +   +   ++  K++++A+    Q  +     +R
Sbjct: 159 RNRDYDKAAKEFSAALELHRGNGVDEIYNNLGVVHIARKQYAQAVETFRQALQAGGVSSR 218

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
               L +A +         +    +A+ES K       A+      L+++N+  +A    
Sbjct: 219 TYNNLGLALAR--------MGRLDEALESFKYAGGEAKANNNLGYVLLTENQPAQAAPYF 270

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
           EK  +++P     N Y           LKRA 
Sbjct: 271 EKAIELSP-----NYYVK-----AADNLKRAR 292


>gi|260892174|ref|YP_003238271.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
 gi|260864315|gb|ACX51421.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
          Length = 677

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 79/238 (33%), Gaps = 27/238 (11%)

Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-- 197
              +    + P  R    Y+L  E  R  D  +A R    A    P       +V+ +  
Sbjct: 189 ERAVRESPRDPFNR----YNLGVEYLRQRDFAAALREFQAAFRYLPSLAVSYASVLVRNI 244

Query: 198 ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
               V    +  A+  L   K+   ++      LL        ++GD+  +     E L 
Sbjct: 245 VLCLVALGCYDEALKVLADAKEAYPDYTD----LLYCEGCVYLNQGDLERARASFEECLA 300

Query: 255 L---CDNSIM----ASICA----AKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTH 301
                 + I      S  A     +    +     A+    +  + +P  +P +A + + 
Sbjct: 301 RGESASHHITQRGVGSYLAWCSLGQLEEQKGNFEVAKSAYARALECHPKFYPALARLTSL 360

Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359
           LL   +  +  R   L  +N E  E+ +I + I    G  +QA      A++  P   
Sbjct: 361 LLRSTSPEEALR-ELLSHLNLEDEEACLIAAHIFASQGHHEQALELLDEALRRHPSSS 417


>gi|194208138|ref|XP_001489186.2| PREDICTED: similar to RIKEN cDNA B230396O12 gene [Equus caballus]
          Length = 976

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 13/133 (9%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283
            L  R+L +        +  D + +LKL   +++  IC+    A++LI+Q    +  V+L
Sbjct: 625 ALCGRALLHLALDQQKEAVDDILSALKLDLTTVVPEICSLKPEARALITQGLSSRCRVLL 684

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343
            +           +    L  E+T G L     L +I+   +   ++++ +   +GS ++
Sbjct: 685 SQS---------LDTGAPLSDEDTQGLLAAGEALVKIDAGQLSWHILLADVLTAVGSYEE 735

Query: 344 AHAKAMLAMKIAP 356
           A A+   A+  AP
Sbjct: 736 AGARLQKALHPAP 748


>gi|156975930|ref|YP_001446837.1| hypothetical protein VIBHAR_03696 [Vibrio harveyi ATCC BAA-1116]
 gi|156527524|gb|ABU72610.1| hypothetical protein VIBHAR_03696 [Vibrio harveyi ATCC BAA-1116]
          Length = 365

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 50/185 (27%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           ++  A   +AR+ +  D  DM  +     E+L+    ++ A    A     +   RKA  
Sbjct: 173 HQQLAEKALARADKAMDANDMKTALSAFGEALRYQPTNLEARQKLAALYFGKGDTRKAYE 232

Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341
           IL+                                   ++  +    + +SK+ ++    
Sbjct: 233 ILQTG-------------------------------ISLDPNNQPLRLALSKLLVKA--- 258

Query: 342 DQAHAKAMLAMKIAPR-KEIFLLL-AQIEQANSHNT--------------DKILYWTQSA 385
           DQ  A     + + P     +L + A + Q    N               +   +W   A
Sbjct: 259 DQPEAALSPLVHLPPTPSRDYLAMRAALAQKQKQNDIALESYQLLTQREPENARWWLGLA 318

Query: 386 LHAMP 390
           +    
Sbjct: 319 IQQER 323


>gi|154333691|ref|XP_001563102.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1368

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384
            E+ V  ++ A   G    A  +A+ A++I P   +F LLA I ++         +    
Sbjct: 41  FEAHVTAAQNAFLRGDSQAAEQEAVQALRIRPTAHLFALLAVIAESKGKFDQASDFRLLQ 100

Query: 385 ALHA 388
           A  A
Sbjct: 101 AFLA 104


>gi|254246014|ref|ZP_04939335.1| TPR repeat [Burkholderia cenocepacia PC184]
 gi|124870790|gb|EAY62506.1| TPR repeat [Burkholderia cenocepacia PC184]
          Length = 673

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L  A+     AL  +P                 + + A   + +      +   
Sbjct: 73  AHRAGRLAEAEHGYRNALASNPADADALHLFGVLRHQQGQHAEAADLVGRAVALRPD--- 129

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +         G +  +      +L L     +A      +  +  +   A    
Sbjct: 130 -DAALQLNLGNALKALGRLDEAIDRFRNALTLAPEFPLAHYNLGNAYAALQRHDDAIDAF 188

Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++ P     H  + N    L   +    L    R  E+      +   ++     M
Sbjct: 189 GRALRLTPDDASIHNNLGNALNALGRHD--DALAAFGRALELRPGHAGAHNNLAMALSAM 246

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D+A      A+   PR
Sbjct: 247 GRADEAIVHFQAAIAAQPR 265


>gi|91777210|ref|YP_552418.1| Hpt domain-containing protein [Burkholderia xenovorans LB400]
 gi|91689870|gb|ABE33068.1| Hpt domain protein [Burkholderia xenovorans LB400]
          Length = 128

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 1/82 (1%)

Query: 123 YLLEVQIALAER-QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181
           +LL+ +        +  A   LEM+ Q   T   A+   +  +   G  ++A R A  A 
Sbjct: 17  HLLQQKALELAGGDHVTARRLLEMIAQTDRTALAALRDSFRTASWDGVGSAAHRIAGSAR 76

Query: 182 DISPDAPWVTEAVVQQYVLAKE 203
            +     +     ++     ++
Sbjct: 77  MLECHEVFALLTRLEAAARGRD 98


>gi|56697741|ref|YP_168111.1| TPR/sulfotransferase domain-containing protein [Ruegeria pomeroyi
           DSS-3]
 gi|56679478|gb|AAV96144.1| TPR/sulfotransferase domain protein [Ruegeria pomeroyi DSS-3]
          Length = 582

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 28/161 (17%)

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VIL 283
           LLIA SL  A      A+   A  +++L    I A +  A   + Q     A+     +L
Sbjct: 173 LLIALSLPLARADHPGAAIDVARRAVELAPRHIPARLTLAMRHVEQGDSDAAKAMYHRVL 232

Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES--------LVIVSK-I 334
           E        P+ A     L   N   + +R     +   ++ E+           +++  
Sbjct: 233 EIA------PDQAEALEQLAHLNDAAENQRLAPQVQTALKTAEAGSLDKAQLHFALARIA 286

Query: 335 ALEMGSIDQAH---------AKAMLAMKIAPRKEIFLLLAQ 366
           A        A          A+ M     A  +    L+A+
Sbjct: 287 AQSADDDGLARNLTRANATMARLMPYDAGADTRLSEALMAR 327


>gi|56750999|ref|YP_171700.1| hypothetical protein syc0990_c [Synechococcus elongatus PCC 6301]
 gi|56685958|dbj|BAD79180.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 287

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 79/187 (42%), Gaps = 6/187 (3%)

Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159
           I  A++  +  +Q     N++ V+L+    +L   Q + A   LE   ++       +++
Sbjct: 58  IEFAQRQAALATQ--LAPNDFRVWLVLADASLRLNQLDPAIAALEKAQKLSPREPAILFA 115

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219
           L     R G+ + A  +  + L I PD+      +   Y++ K++  AI    +  +   
Sbjct: 116 LGSARFRQGNYSEAASFLQRGLAIKPDSSGALFGLGNVYLIQKQYPPAIAAFQKAVQVKP 175

Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279
           ++    AI  +   L + ++GD   + +    +++L  ++    +  A  +  Q +  +A
Sbjct: 176 DF--WEAINNLG--LVSYEQGDRNQALNYWNRAIELSKDAAEPVLAKAVLVYQQGQTEEA 231

Query: 280 EVILEKI 286
             + ++ 
Sbjct: 232 VRLAQQA 238


>gi|319902948|ref|YP_004162676.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319417979|gb|ADV45090.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 283

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 59/199 (29%), Gaps = 31/199 (15%)

Query: 88  LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147
           L    + +      LAR  +S        + E L  L+   I   +R Y  A    E  L
Sbjct: 98  LNRAAIYLELGKDELARMDYSLALDIEADNQEAL--LMRAYIYRQKRDYKAARADYERFL 155

Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207
           ++          L   + + G    +     K +                          
Sbjct: 156 KLNPLSYNGRLGLATLAQKEGKYEESLSLLNKMIA------------------------- 190

Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267
               ++   + +      A+L IAR+    D   +  +  D  E L L      A +   
Sbjct: 191 ----DKMDGSTQITTSLYAVLYIARAGVEKDMKHVDLALIDLEEGLDLDAAQPEAYLARG 246

Query: 268 KSLISQNKKRKAEVILEKI 286
           +  +SQ KK  A+   EK 
Sbjct: 247 QIYLSQKKKDLAKRDFEKA 265


>gi|297560185|ref|YP_003679159.1| hypothetical protein Ndas_1214 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844633|gb|ADH66653.1| hypothetical protein Ndas_1214 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 2922

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 8/74 (10%)

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G+ ++A++ A +A  I+ +A             A +   A     +      + +R  
Sbjct: 559 RAGEADTARQDAERAAHIAYEAADTAT------RTAGD--GARVGEARAAAQRADTHRRD 610

Query: 226 AILLIARSLENADK 239
           AI     + +  + 
Sbjct: 611 AITAAQDAADRHES 624


>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
 gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
          Length = 866

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 51/190 (26%), Gaps = 31/190 (16%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-----------LYFESCRIGD 169
           LV LL     L     +            P     AV +           L     R+G 
Sbjct: 63  LVSLLRQCAELLHGDEDT-ERISAARRVAPQLHSLAVRAGHARDPRVACALADLLVRLGR 121

Query: 170 LNSAQRYATKALDISPDAPW--------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKE- 220
             SA+R   +A  +  +           +    V     A+EW  AI    + +      
Sbjct: 122 GASARRLLEEATAVEEEGEDGDEEEDSVLWNKRVAMLAEAEEWGDAIAAFGEMRARGVAP 181

Query: 221 --WNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMASICAAKSLISQNKK 276
             +   RA+    R+    +   + A    A  + +  L    +      A         
Sbjct: 182 DGYACARALHACGRAGAPREGQAVHAHAAKAGHVAAHPLVPGFL------AGMYAESADV 235

Query: 277 RKAEVILEKI 286
             A  +LE  
Sbjct: 236 GAARRVLETE 245


>gi|91977196|ref|YP_569855.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisB5]
 gi|91683652|gb|ABE39954.1| TPR repeat [Rhodopseudomonas palustris BisB5]
          Length = 856

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 86/344 (25%), Gaps = 52/344 (15%)

Query: 74  HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIAL 131
               +R   +   A+     +  A N  L       + +     N  +V   +   Q A 
Sbjct: 126 RGFLRRKAGRLEAAVSDFERARRAGNGNLTDAQRRTLDEAIAEANTAIVAGDIAAAQSAF 185

Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191
               +  A  +   + +     E     L     R G    A   A + +          
Sbjct: 186 DGNDFAAAEARAAKLRERLPESEPVNRILVESLLRQGRTAEALAAADRFIASGRAGAQFR 245

Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--------------LLIARSLENA 237
                        + A    +   ++    +  R                  +  +    
Sbjct: 246 AERGYIRRREGALAGAAEDFHIAAQDPALSDEERRRYAAAEAEANDAQDQATLNEATRAL 305

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297
           +      +   A   L    +S  A    + +L  QNK ++A   L+ I   +P      
Sbjct: 306 NDDRPGEAIERAQRLLARKPDSETARSLLSTALARQNKIKEAIAELDAILARDP------ 359

Query: 298 IYTHLLSENTVGK---LKRALRLEEINKESVESLVIVSKIAL------------------ 336
                  +    +    +R   L     + +E+L  ++  A+                  
Sbjct: 360 ----GRGDIYAQRGYYKRRIQDLAGARADFIEALNRLTDAAMVDNVKKAVAEIDTATAPG 415

Query: 337 ----EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376
                +   D+A  +     +     E    LA IE A      
Sbjct: 416 QRTAAVSKEDEALKRIAQLARQKRYDEALRGLAAIE-AEVGPKG 458


>gi|115462995|ref|NP_001055097.1| Os05g0289400 [Oryza sativa Japonica Group]
 gi|46576043|gb|AAT01404.1| putative crooked neck protein [Oryza sativa Japonica Group]
 gi|113578648|dbj|BAF17011.1| Os05g0289400 [Oryza sativa Japonica Group]
 gi|215713490|dbj|BAG94627.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|226235503|dbj|BAH47700.1| putative crn [Oryza sativa Japonica Group]
          Length = 723

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 27/280 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREF 155
             +  AR+++   +       +  V  +   +     R+   A    +  + ++P  +  
Sbjct: 255 GEVERARQVYQRAADLLADDEDAQVLFVAFAEFEERCREVERARAIYKYALDRVPKGQAE 314

Query: 156 AVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +Y  +    +  GD            +      +  +P         ++         R
Sbjct: 315 ELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNNDR 374

Query: 207 AITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD--- 257
                 +   N    +  R       L I  +L E  D  D+  +     E LKL     
Sbjct: 375 IREVYERAIANIPPADEKRYWQRYIYLWINYALYEELDAKDVERTREVYSECLKLVPHKK 434

Query: 258 -NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
                  + AA+  I Q   + A  IL     ++P  +I   Y  +  E  +G   R   
Sbjct: 435 FTFAKMWLMAAQFEIRQRNLKAARQILGNAIGMSPKGKIFKKYIEI--ELYLGNFDRCRT 492

Query: 317 LE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L     E +  +  +    +++   +   D+A +   LA+
Sbjct: 493 LYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAI 532


>gi|325518471|gb|EGC98170.1| Flp pilus assembly protein [Burkholderia sp. TJI49]
          Length = 280

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 37/134 (27%), Gaps = 5/134 (3%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL         Q   +      +L+ P         L   +   GD   A +   +
Sbjct: 89  PDTILLRADALRMTEQPAASAAAYSQLLKTP-LASRGYRGLGLIAGAAGDFGRAAQALAQ 147

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239
           A +++P    +   +    +   +   A   L +      E ++    ++   +L     
Sbjct: 148 ASELAPTDASLLSDLAYARLRNGDIVGARVPLMKA----AELDQRNPKIVSNLALYLIAA 203

Query: 240 GDMIASYHDAIESL 253
           G    +     +  
Sbjct: 204 GRSQDAQRLMNQQH 217


>gi|229552184|ref|ZP_04440909.1| tetratricopeptide repeat family protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|229314486|gb|EEN80459.1| tetratricopeptide repeat family protein [Lactobacillus rhamnosus
           LMS2-1]
          Length = 421

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 93/304 (30%), Gaps = 57/304 (18%)

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
            F      L+  L  R  ++G  A     ++++  +   A    S +       +   V 
Sbjct: 46  GFNGQAKRLYQGLLGRYPEQGDLATALADIAVSDGDADAALNYLSRIQ----PDDPAYVQ 101

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            L             A +  +            +Y +  +               KA  +
Sbjct: 102 SL-----------ISAADVYQS---------LGLYEVSEQKLL------------KAKQL 129

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARSLENADKG 240
           +P  P VT A+ + Y     + +AI   N+               A L  + +     + 
Sbjct: 130 APKEPVVTFALGEFYFDWGHFGQAIAAYNELLAAGTTELAGVNIEARLAASLAQTGQYED 189

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
            + A     +++L L               +  +   KA   L+ +   +  P  AN Y 
Sbjct: 190 AVAAYEDVGVDALDLNGRFE-----LGGLYLQLHDPAKAIANLQAVIDTD--PSFANAYL 242

Query: 301 HL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            L          E  +  ++  + +++ N +      +  K+AL   + D A      A+
Sbjct: 243 PLATAYEAQNQPEKALDTVQAGVMVDDTNPDLY---ALGGKLALSEDNPDLAETYLQKAL 299

Query: 353 KIAP 356
           KI P
Sbjct: 300 KIDP 303


>gi|239827486|ref|YP_002950110.1| hypothetical protein GWCH70_2134 [Geobacillus sp. WCH70]
 gi|239807779|gb|ACS24844.1| TPR repeat-containing protein [Geobacillus sp. WCH70]
          Length = 420

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 77/274 (28%), Gaps = 37/274 (13%)

Query: 124 LLEVQIALAER----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
           L+   +   +           +  E M   P  +      L       G    +  +  K
Sbjct: 106 LIAADLYQMQGLEEVSERKLQQAYEKMPDEPIIQFA----LAELYFLTGQYPKSIPFYEK 161

Query: 180 ALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237
            L            E + +   L  E+ +A+ + ++  +   +        L        
Sbjct: 162 VLKKEKTIAGTHIPERLAEALSLCGEFEQALPYYDEALQEKIDSR-----TLFGYGFTAF 216

Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPE 294
                  +     E  +L    +   +  AK+   + +       LEK +++     H +
Sbjct: 217 QAEYYRTAIEKLSELKELDPEYVPLYLYLAKAYEQEGQ-------LEKSYEIAKEGIHVD 269

Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
             N    L +     KLK          +  ES +  + I ++ G I+       L +  
Sbjct: 270 EWNKELLLYAGKVALKLK--------KPDEAESWLRKA-IEIDQGYIEALTTLCALLLHQ 320

Query: 355 APRKEIFLLLAQIEQANSHNTDKILYW-TQSALH 387
              +E+   L   E       D    W    A H
Sbjct: 321 ERYEEVVSCLE--EAMKQGEYDPQFEWDLARAKH 352


>gi|156151302|dbj|BAF75936.1| cellulose synthase subunit C [Asaia bogorensis]
          Length = 1092

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 57/331 (17%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCR 166
               Q++         L   Q  LAE +   A + +  + +   TR+  A+ +  F + +
Sbjct: 493 QRADQENALS--PWSRLHYAQALLAENRRADAEQVMAPLTETEGTRDPAALQAALFYAAQ 550

Query: 167 IGDLNSA----------------QRYATKA-----LDISPDAPWVTEAVVQQYVLAKEWS 205
            GD  +                 +R   +A     +  +P  P          +   +  
Sbjct: 551 TGDERTVTRLRAQVPERSMTPDLRRILRQADLRAQVANAPTDPDSARFYFAHLLDQGDPD 610

Query: 206 RAIT-----FLNQK-----------KKNAKEWNRNRAILLIARSLENADKGDMIASYH-- 247
            ++       L  +            + A+      A   +A +       D+  +    
Sbjct: 611 GSLAQVIATTLYDRGDRAGASQILDLQIARAGGHLNAAQRLAYAGAFLHMRDLERARRLS 670

Query: 248 --------DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EI 295
                   DA ++ +L       ++  +  L  Q  + +A   L       P+P     +
Sbjct: 671 ISLKGAALDATQATQLAQIDTGLAVATSDHLNDQGNRARAYEALAPT-LDRPNPPVSANL 729

Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
           A    +          +  L+  + +   +++ + + +  + M    +A         IA
Sbjct: 730 ALARLYSSGGQYAQAYQITLQAVQHDPSDLDARLALIQTCISMHRYAEASGYVQQMNAIA 789

Query: 356 PRK-EIFLLLAQIEQANSHNTDKILYWTQSA 385
           P     +   AQ+++A  +    +      A
Sbjct: 790 PTDPRSWYAAAQLDRARGNIRAAVRE-LAQA 819


>gi|34557256|ref|NP_907071.1| hypothetical protein WS0862 [Wolinella succinogenes DSM 1740]
 gi|34482972|emb|CAE09971.1| hypothetical protein WS0862 [Wolinella succinogenes]
          Length = 322

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 7/184 (3%)

Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPD 186
           +   +  +Y+ A +    +LQ   +   A+Y+    +         A   A ++L + P+
Sbjct: 6   RALNSLGRYSEALKLSNELLQKEESS--AIYAEMIIALLNQEKSKEALEAAKQSLSLHPN 63

Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246
            P++   + +     +    A++ L++    +         L   R+    D    + + 
Sbjct: 64  DPYLLYLLSESLRRLQRPKEALSALDEALALSPSS----GALHHQRAKIFCDLNQYVQAK 119

Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306
                +L L  +        A    + +    A  IL+ I   +PH E A     L  E+
Sbjct: 120 RAIDSALSLESDDPDILCTLAFITHALDNTLIACEILQSILARHPHHEQALKLYGLWGES 179

Query: 307 TVGK 310
            + +
Sbjct: 180 RLDR 183


>gi|328880580|emb|CCA53819.1| Adenylate cyclase or Guanylate cyclase [Streptomyces venezuelae
           ATCC 10712]
          Length = 1018

 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 16/218 (7%)

Query: 81  YDKGYKALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHNEY--LVYLLEVQIALAERQYN 137
             +   AL   G +++A  +   A  + +  + ++T              Q  L   +  
Sbjct: 614 RRRAADALAEAGRLALAHADPVWAADLLNRAAARYTTGEPGRTATRRRLGQTLLDLGRGA 673

Query: 138 IAHEKLEMML-------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
                LE +L       +       A   L       G   +     +            
Sbjct: 674 DGRSLLEEVLAQTPPDGEDAVEAAHARLGLASVGRTAGTPRATGPGRSGGGRRDESPAEA 733

Query: 191 TEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249
             A +  +  A +    A   L   ++  ++     A  L+AR+L++A + D       A
Sbjct: 734 AAATLPVFAAAGDELGQARAALRLAQRAQEQGRHRAAERLLARALDHAVRADAEPERAAA 793

Query: 250 IESLKLC----DNSIMASICAAK-SLISQNKKRKAEVI 282
           + +  +        +  ++   +  L  Q   R+A  +
Sbjct: 794 LGATGVSLWRGPQPVADAVDRCRALLADQGPGRRAVRL 831


>gi|297797854|ref|XP_002866811.1| hypothetical protein ARALYDRAFT_912309 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312647|gb|EFH43070.1| hypothetical protein ARALYDRAFT_912309 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 805

 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 32/89 (35%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            E    GD+ +A+    +A    P++  +  A  +    ++E  RA   L + ++     
Sbjct: 581 KEKWLAGDVPAARGILQEAHAAVPNSEEIWLAAFKLEFESREVERARMILAKARERGTTG 640

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAI 250
                  ++ R LE      +  S    +
Sbjct: 641 RVWMKSAIVERELERLMSKALQESPKSGL 669


>gi|218887372|ref|YP_002436693.1| hypothetical protein DvMF_2283 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758326|gb|ACL09225.1| TPR repeat-containing protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 186

 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 61/200 (30%), Gaps = 36/200 (18%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           GDL  A+ Y  KA   +   P     +    V       A+  L +K  N +  +++   
Sbjct: 21  GDLEKAEEYYRKAAGSNGVHPDPYLGLATIAVQRGNLEAAL-VLYRKAANIEANDKS--- 76

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L    L   + G    ++   + +L +       ++ A   L+                
Sbjct: 77  -LAGMGLVEMETGAHAEAFDHFVAALGMNPG----NLVAMNGLLRLG------------- 118

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
                      Y     E  V  L+  L L     E       ++   + +G  D+A A+
Sbjct: 119 -----------YHLGRIEEVVAHLRAFLELS---PEKDNVRFSLAGCLISLGRKDEARAE 164

Query: 348 AMLAMKIAPRKEIFLLLAQI 367
             + +  AP       +  +
Sbjct: 165 LEVILDRAPDHADAREMYAL 184


>gi|153005324|ref|YP_001379649.1| hypothetical protein Anae109_2464 [Anaeromyxobacter sp. Fw109-5]
 gi|152028897|gb|ABS26665.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 252

 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 66/228 (28%), Gaps = 20/228 (8%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESCRIGDLNSAQRYATKALDISP 185
           A    +   A  + +  L I      A       L F   RI +   A     +AL++ P
Sbjct: 41  AFRAGRAPDALREYDAALAIDGRLAEAHRGRGLVLDFAFARIDEAERAY---RRALELRP 97

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245
           + P     + Q          A+   +          R   +    + L     G     
Sbjct: 98  EYPEAHNDLGQLLARTGRHEEALREFDLAL--GDMTYREPYVARCNKGLALWRMGRREEG 155

Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305
           + +    L L  +         + L+ + K   AE I E           A   +     
Sbjct: 156 HAELRACLSLAPSFCKGRRELGRILLDEGKM--AEGITELA---------AYARSCEKVP 204

Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353
           +   +L  A         + ES    +++A + G  D+      L ++
Sbjct: 205 DAHLQLGLARMRAGDVPGARESFERCAELAPQGGEGDECRRSLSLLVE 252


>gi|146070859|ref|XP_001463115.1| hypothetical protein [Leishmania infantum]
 gi|134067198|emb|CAM65464.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 1184

 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 86   KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL-AERQYNIAHEKLE 144
            +AL  G   +   ++  A +  + V + H  ++          IA   E+ Y  A +   
Sbjct: 1063 EALTRGWALLRRGDVAAAHRAWTAVCRAHGTNDVMGTKA-HAYIAEAIEKDYAAAAQWYA 1121

Query: 145  MMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
              LQ  P  R  A  Y +  E+        A R   +A  +        +AV       
Sbjct: 1122 RSLQLDPQDRMTAYNYGVLLEALLDK-PQEALRLYDRAAAL-------GDAVAGARARE 1172


>gi|160896961|ref|YP_001562543.1| hypothetical protein Daci_1514 [Delftia acidovorans SPH-1]
 gi|160362545|gb|ABX34158.1| hypothetical protein Daci_1514 [Delftia acidovorans SPH-1]
          Length = 794

 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 73/260 (28%), Gaps = 21/260 (8%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
             A    S +  +  F  E  V LL    A    +     E                + L
Sbjct: 135 ATASLALSDIQSRLRFDREGGVALL-APAADLMGRLPHTGEPYRY--------WNGWHYL 185

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK- 219
             E+        A   A + +D+       ++   +     ++    +      +     
Sbjct: 186 AREAQ-------AWELAEQGVDLQRSH-ERSDPDGEASPARRDARACLRKAELARLRGDV 237

Query: 220 --EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
                + +A   +    +     D     H A E L L   S+ A + AA+  +++ +  
Sbjct: 238 PATVRQVQAATALLTQADAEQNVDFDDWLHLAREVLPLAPQSVPAVLMAAEQHLARTESP 297

Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSKIAL 336
            A   +    KV+     A     +       +L    R   + + +   S +++  +  
Sbjct: 298 AASQAVRTHRKVHAARLQAMACHAMGQPEAALQLAALGRFGLVDDSDDAFSGLVLQWLEE 357

Query: 337 EMGSIDQAHAKAMLAMKIAP 356
                D A       +   P
Sbjct: 358 AGRLADAADLALESVLHSRP 377


>gi|163847351|ref|YP_001635395.1| hypothetical protein Caur_1789 [Chloroflexus aurantiacus J-10-fl]
 gi|222525196|ref|YP_002569667.1| TPR repeat-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163668640|gb|ABY35006.1| TPR repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449075|gb|ACM53341.1| TPR repeat-containing protein [Chloroflexus sp. Y-400-fl]
          Length = 450

 Score = 36.8 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 113/344 (32%), Gaps = 42/344 (12%)

Query: 79  RNYDKGYKALYTGLM-------SIAA-HNIPLARKMHSYV-----SQQHTFHNEYLVYLL 125
           R ++   +A    +        ++ +   +  A + H        +      N   ++  
Sbjct: 77  RRHEAAIEAFSRAIALRPEYPWALGSRGQVWRALRRHHEALVDFDAALALNPNLAWIHAE 136

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRYATKALDI 183
             +   A  Q+  A E     L I            + +   R  D  +A      A+ +
Sbjct: 137 RGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGITYREMR--DFPAAIADFDAAIAL 194

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243
             +  W+     +   LA ++  A+  L++      E +   A    +R       GD+ 
Sbjct: 195 QGNMAWLYAERGETRRLADDFEGALADLSRAL----ELDSAYAWAFGSRGAAFRAVGDLN 250

Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303
           A+  D   +L+L                + N+  +A     +  ++ P     N    L 
Sbjct: 251 AALADFNRALELDPGYTWVYFQRGLLHRNTNRTDEAIADFSRAIELEP-----NYIAALA 305

Query: 304 SENTVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355
               + +L+R          R  E+  +   +L    ++   +   D+A A    A+ + 
Sbjct: 306 ERGELFRLQRRYEEALRDFNRTIELQPDHAWALGSRGQVYRVLARYDEALADFNRALALK 365

Query: 356 PRKEIFLLLAQIEQANSH----NTDKILYWTQSALHAMPDPLWI 395
           P   ++++    E+  +H    N ++ L     AL   P+  W+
Sbjct: 366 PDM-VWVI---AERGETHRLLRNYNEALEDFNRALELSPNDSWV 405


>gi|326387784|ref|ZP_08209390.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207830|gb|EGD58641.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 679

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 30/276 (10%), Positives = 65/276 (23%), Gaps = 68/276 (24%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ----------YNIAHE 141
           L ++   +   A    +    +    N  L +LL         Q            +   
Sbjct: 18  LWALHGADDHAAVAREAGNLLERYPENRDL-HLLAASSLRFLGQPDAALAALDRLAVLQP 76

Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
              +M Q           L   + R  D   A     +A+ I+P  P   + +   + + 
Sbjct: 77  HYSLMHQE--------RGLCHVARR--DAPQAISALLEAVRINPALPMAWKILEGLWRMT 126

Query: 202 KEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
            + + A      +    +      RA  L   +                        + +
Sbjct: 127 GDPAGAERAAEHRSMLASLPPPIVRATALYGDA------------------------DLV 162

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE- 319
            A     + L+      +   +L KI                        L  A  L   
Sbjct: 163 PAEAIVRRYLLDHGDHPEGMRLLAKI------------------GVDRDVLDDAETLYAG 204

Query: 320 ---INKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
              +  +   +     ++ +      +A       +
Sbjct: 205 VLSLAPDHRAARSEYVQVLIARHKFGKAREALAPLI 240


>gi|308069481|ref|YP_003871086.1| hypothetical protein PPE_02720 [Paenibacillus polymyxa E681]
 gi|305858760|gb|ADM70548.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 172

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 5/106 (4%)

Query: 132 AERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
            +  +  A E  E  +   P   E         + R G L  A  YA  A+ ++P     
Sbjct: 15  LQNDFEQAVEWFEKAISAQPDHAEHYFRCSVTYA-RSGRLEQALAYAEHAVRLAPQQDE- 72

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236
               +      +   +A   L+  +   +   R  AILL+ R++  
Sbjct: 73  YVLHLHAQEARQHTEKARKMLDVDRATPQV--RQDAILLLERAIAL 116


>gi|258591587|emb|CBE67888.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 181

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 28/106 (26%)

Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
           S         +E    L     +L       A EK   +L        A+  L     + 
Sbjct: 48  SAAPGPKLSPSEIDSALKAAHASLDAGDLQAAWEKYHQILLTDRNHIEALTHLGVILTQS 107

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213
              + A +   +AL ++P          Q      +   A     +
Sbjct: 108 NQPDEAIKLYDRALSLNPQYAHALFDKGQALQAKGDAKGATEVFQR 153


>gi|262197281|ref|YP_003268490.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
 gi|262080628|gb|ACY16597.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
          Length = 1339

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 50/299 (16%)

Query: 93   MSIAAHNIPL--ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN-------IAHEKL 143
            +++   +     A  +     +      E   +LL    A+A   ++        AH  L
Sbjct: 769  LALGYTDDAADDASGLLQRAQKNDAPGLEARAHLLAGHAAMARGAWDQADTSLRAAHATL 828

Query: 144  EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
            E           A+    + +       +               P +   +      A+ 
Sbjct: 829  ESTAFDEVAELVALRGAVWLARAELASTAPLG----------ALPELAGELTAARADAE- 877

Query: 204  WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
                   L +  + A+      A L +A +  +AD  D  A    A  +L    +   A+
Sbjct: 878  -----AALTRAPEAARHVAALYAALALALTRADADSDDARAMSERARTALARIPD-TPAA 931

Query: 264  ICAA-----KSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHLLS-------- 304
            +  A     ++L +Q +  +A  + E+  +         HP +  +              
Sbjct: 932  LVDALLQVGRALQAQRQHGRALELFERAQQATAERHGEEHPRLLPVLLARAESELFLGHY 991

Query: 305  ENTVGKLKRALRLEEINKE-----SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            E    +L+RA  L E   E     ++ +  ++ +  L  G    A  +   A+  A   
Sbjct: 992  ERAQTRLERARALAESEPEGGADSAIAARALLGEARLRRGFYASAGEELEAALSAARTA 1050


>gi|259488420|tpe|CBF87839.1| TPA: Pre-mRNA-splicing factor clf1
           [Source:UniProtKB/Swiss-Prot;Acc:Q5BDX1] [Aspergillus
           nidulans FGSC A4]
          Length = 673

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 19/183 (10%)

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADKGDM 242
           W   A +++     +  R      +              R    L I  +L E  +  D+
Sbjct: 324 WFDFARLEEQS--GDPERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDI 381

Query: 243 IASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             +     E LKL            +  A+  + Q   + A   L +   + P  ++   
Sbjct: 382 DRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDKLFRG 441

Query: 299 YTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           Y  L  E  + +  R   L E     N  + +S +  +++   +   ++A A   L +  
Sbjct: 442 YIDL--ERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQ 499

Query: 355 APR 357
            P 
Sbjct: 500 -PT 501


>gi|297567437|ref|YP_003686409.1| oxidoreductase molybdopterin binding protein [Meiothermus silvanus
           DSM 9946]
 gi|296851886|gb|ADH64901.1| oxidoreductase molybdopterin binding protein [Meiothermus silvanus
           DSM 9946]
          Length = 465

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 9/104 (8%)

Query: 11  ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWI--LLFAVSRFF--L 66
           ++ +    + ++ +P    + W  R    +  V+   LY  L  W+  L++         
Sbjct: 65  LAFMGAVGVWLALHP---FLAWAFRRLGWAALVLGFALYALLGGWLAGLVYTALLGLAGW 121

Query: 67  SCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110
               +   +L  R   K   AL  GL+++ A      R      
Sbjct: 122 GRGRLARPVLEDRARRKTLMAL--GLLAVGAGVWRGVRAQAQNA 163


>gi|196232947|ref|ZP_03131796.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196222925|gb|EDY17446.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 655

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222
           E  +I D   A+ +   AL ISP        +    +  K WS A TF     +   +  
Sbjct: 543 ERTKIADRTRAKSFYRLALQISPLHTGTLNNLGVLAMEEKRWSVAATFFKTALQTEPD-- 600

Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258
              A +    +   A+   + A+  +   +L+L  N
Sbjct: 601 --DAKIHYLLARVYAEDNHLDAARAEIETALRLRPN 634


>gi|223935403|ref|ZP_03627320.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223895813|gb|EEF62257.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 288

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           + + L +EW  A+   N+             +  + R       G+   +       LK 
Sbjct: 55  ELHRLHEEWEGALADFNRAAALDPTSK----LAELGRGRALLGAGNPKEALLALEIFLKA 110

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
             + I A +  A++L   N+  +A     ++ ++ P P
Sbjct: 111 FPHHIEARLTYARALSRLNRPAEAAENFSQVIQLTPDP 148


>gi|170693342|ref|ZP_02884502.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
 gi|170141872|gb|EDT10040.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
          Length = 716

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 57/193 (29%), Gaps = 11/193 (5%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
              G L++A+    + + + P+       +            A     +      +    
Sbjct: 99  KARGRLSAAKAIYRQLIAMRPEHADAHNQLGAVLHAQGHHEEAEVSYRRALSLRPD--HA 156

Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            A       L+   +     +     E+L+       A       L+   +  +A+    
Sbjct: 157 EAHYNHGVVLQTLRRLHEAEA--AYRETLRRLPAHAQAHNNLGNVLMDLGRVDEADAAYR 214

Query: 285 KIWKVNPH-PEIANIYTHLLSENTVGKLKRAL---RLE-EINKESVESLVIVSKIALEMG 339
               + PH PE  N     L      +L  A    RL   +  +  E+ V +     ++ 
Sbjct: 215 DALSIQPHYPEALNNLAGALK--AAQRLTEAELACRLALTMRPDYAEAHVNLGAALTDLA 272

Query: 340 SIDQAHAKAMLAM 352
            + +A +    A+
Sbjct: 273 RLPEAESAYRKAI 285


>gi|119485213|ref|ZP_01619598.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106]
 gi|119457441|gb|EAW38566.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106]
          Length = 272

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230
            +A     KA++++P+AP         Y   + W  AI        +  E +   A+   
Sbjct: 93  EAALSDYNKAIELAPNAPDPYLNRGVAYERLERWQDAI----ADYNHVLELSGEDAVAYN 148

Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284
            R    A  GD  A+  D   + +L  N   A    A +L    +  KA   ++
Sbjct: 149 NRGNAEAGLGDWKAAIIDYETAAELDPNYAFARANYALALYQDGQTEKAIRTMK 202


>gi|108762646|ref|YP_632902.1| hypothetical protein MXAN_4740 [Myxococcus xanthus DK 1622]
 gi|108466526|gb|ABF91711.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 746

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 11/125 (8%)

Query: 130 ALAERQYNIAHEKLEMM----LQIPATREFAV-YSLYFES---CRIGDLNSAQRYATKAL 181
           A A    + A   L+ +    +++ AT    +      E+    R GD+  A R A  A+
Sbjct: 156 ARATNDRDAAAASLKELRTLRVELAATDLEPLSVGFLREAAVRRRAGDMAGAVRLAEVAV 215

Query: 182 DISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENAD 238
           ++SP  P+    + + Y L    + SR +  + Q     A++    R  L    +L    
Sbjct: 216 ELSPGLPYARFELAELYALEKPGDVSRTLGQVRQALATLAQDARYRRPALADLGALVLLA 275

Query: 239 KGDMI 243
            G   
Sbjct: 276 WGATA 280


>gi|83311603|ref|YP_421867.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
           magneticum AMB-1]
 gi|82946444|dbj|BAE51308.1| Predicted O-linked N-acetylglucosamine transferase
           [Magnetospirillum magneticum AMB-1]
          Length = 658

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 48/165 (29%), Gaps = 7/165 (4%)

Query: 89  YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148
             GLM++       A +    + +    ++     L          +   A +    + +
Sbjct: 78  AKGLMAL-----DRAAEALPILERLAAGNDPE-SLLALGNALRTLSRMEEAAQAFHRLTR 131

Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208
           +         +L      + D  +A      A+ + P    +     Q  +     S AI
Sbjct: 132 VAPGFVGGHINLGILLVSMADTQAALSALDDAVRLHPGVGELHALRGQALLRLGRHSEAI 191

Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             L +           R  LL A   E AD  +    + +   ++
Sbjct: 192 AALEKALAINPALVPARGHLLRAY-RETADWDNEDRLFAEIRAAI 235



 Score = 36.5 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 11/117 (9%)

Query: 206 RAITFLNQKKKNAKEWNRNRAIL------LIARSLENADKGDMIASYHDAIESLKLCDNS 259
            A+  L++ ++ A+ ++R   +        I   +      D  A+     ++++L    
Sbjct: 111 NALRTLSRMEEAAQAFHRLTRVAPGFVGGHINLGILLVSMADTQAALSALDDAVRLHPGV 170

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PE---IANIYTHLLSENTVGKL 311
                   ++L+   +  +A   LEK   +NP   P    +   Y      +   +L
Sbjct: 171 GELHALRGQALLRLGRHSEAIAALEKALAINPALVPARGHLLRAYRETADWDNEDRL 227


>gi|304321081|ref|YP_003854724.1| TPR domain protein [Parvularcula bermudensis HTCC2503]
 gi|303299983|gb|ADM09582.1| TPR domain protein [Parvularcula bermudensis HTCC2503]
          Length = 670

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 87/238 (36%), Gaps = 50/238 (21%)

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALD 182
           L E +  +    +  A   +E +L    T + A+Y L   + R  GDL  A+  A     
Sbjct: 20  LSEAERLVRSGAFREAAATVEGILSTDPTHQAALY-LRAVALRYCGDLTEAEETARYLCT 78

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN----RAILLIARSLENAD 238
             P               A+EW  ++  L++ ++    + R      A+     ++    
Sbjct: 79  TYPRYG----------RGAQEWGHSLKSLDRFQEALAAYIRAVQLNPALKASWEAIATLT 128

Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298
             +   ++  A E  +L   ++ A++ + +SL ++ K +KAE             ++   
Sbjct: 129 ADEEAKAHAKA-EIARL--TALPAALVSVESLTAEGKLQKAE-------------DLCRA 172

Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
           Y                     NK   E + +++++ +E G +D A      A+ + P
Sbjct: 173 YL------------------LNNKTDPEGMRLLARLGIETGVLDDAEFLLETAIALKP 212


>gi|258539598|ref|YP_003174097.1| TPR repeats containing protein [Lactobacillus rhamnosus Lc 705]
 gi|257151274|emb|CAR90246.1| TPR repeats containing protein [Lactobacillus rhamnosus Lc 705]
          Length = 421

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 93/304 (30%), Gaps = 57/304 (18%)

Query: 64  FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123
            F      L+  L  R  ++G  A     ++++  +   A    S +       +   V 
Sbjct: 46  GFNGQAKRLYQGLLGRYPEQGDLATALADIAVSDGDADAALNYLSRIQ----PDDPAYVQ 101

Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183
            L             A +  +            +Y +  +               KA  +
Sbjct: 102 SL-----------ISAADVYQS---------LGLYEVSEQKLL------------KAKQL 129

Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARSLENADKG 240
           +P  P VT A+ + Y     + +AI   N+               A L  + +     + 
Sbjct: 130 APKEPVVTFALGEFYFDWGHFGQAIAAYNELLAAGTTELAGVNIEARLAASLAQTGQYED 189

Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300
            + A     +++L L               +  +   KA   L+ +   +  P  AN Y 
Sbjct: 190 AVAAYEDVGVDALDLNGRFE-----LGGLYLQLHDPAKAIANLQAVIDTD--PSFANAYL 242

Query: 301 HL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
            L          E  +  ++  + +++ N +      +  K+AL   + D A      A+
Sbjct: 243 PLATAYEAQNQPEKALDTVQAGVMVDDTNPDLY---ALGGKLALSEDNPDLAETYLQKAL 299

Query: 353 KIAP 356
           KI P
Sbjct: 300 KIDP 303


>gi|152988578|ref|YP_001350648.1| hypothetical protein PSPA7_5316 [Pseudomonas aeruginosa PA7]
 gi|150963736|gb|ABR85761.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
          Length = 575

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 69/253 (27%), Gaps = 33/253 (13%)

Query: 109 YVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167
            +++      E L   LL  + A        A                       +  R 
Sbjct: 93  RIAEYLGADQEALDTSLLWARSAPDNLDAQRAAA--------------------IQLARA 132

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    +  Y  K L+            +       +       L Q   +  +   N   
Sbjct: 133 GRYEESMVYMEKVLN---GQGDTHFDFLALSAAETD-PDTRAGLLQSFDHLLKKYPNNGQ 188

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
           LL  ++L     G    +    +E      + +   +  ++ L S  +  +A  +L+   
Sbjct: 189 LLFGKALLLQQDGRPDEALSL-LEDNSASRHDVAPLLLRSRLLQSMKRSDEALPLLKAGI 247

Query: 288 KVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342
           K   HP+     +A     +              L +   +  +    ++ + LE  + D
Sbjct: 248 KE--HPDDKRVRLAYARLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLEAQAWD 305

Query: 343 QAHAKAMLAMKIA 355
           +A       ++  
Sbjct: 306 EARVYLEELVERE 318


>gi|85712759|ref|ZP_01043803.1| Membrane associated TPR repeats containing protein [Idiomarina
           baltica OS145]
 gi|85693399|gb|EAQ31353.1| Membrane associated TPR repeats containing protein [Idiomarina
           baltica OS145]
          Length = 375

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 8/94 (8%)

Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221
            ++   G L+ A ++  K L I P        +         W  A+  L +  +   + 
Sbjct: 192 KQTAEQGLLSEAVKHWQKVLSIDPGHIEARRQLAALQFGRNRWQEALAVLTRGLEVNPQA 251

Query: 222 NRNRAILLI--------ARSLENADKGDMIASYH 247
           +  R +             +L    +    AS H
Sbjct: 252 HELRLLAAKMLDKRQQPQLALTMLKQAQPQASRH 285


>gi|120553619|ref|YP_957970.1| tetratricopeptide TPR_4 [Marinobacter aquaeolei VT8]
 gi|120323468|gb|ABM17783.1| Tetratricopeptide TPR_4 [Marinobacter aquaeolei VT8]
          Length = 438

 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 5/118 (4%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145
           +AL  G++     N+  AR+       Q    +  L Y L V        Y  A +    
Sbjct: 27  EALAQGVVQFQQGNLGQARESFEQA-AQLGVQSPSLHYNLGVVCYRL-GDYPAARQWFSR 84

Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
           +L     R  A Y+L   +        A R+   +L  SP  P   + + +Q +   +
Sbjct: 85  LLDSDD-RALAAYNLGLVALADDRPGEACRWFEASLAASP--PESVQRLAEQQLAQLD 139


>gi|311270089|ref|XP_001925303.2| PREDICTED: filamin A interacting protein 1-like [Sus scrofa]
          Length = 1029

 Score = 36.8 bits (84), Expect = 9.1,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 3/114 (2%)

Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQ 197
           +   +M+     R  A  +L  +  +    ++ + +A  AL  +       +A     + 
Sbjct: 132 KSFALMVVDEQQRLTAQLALQRQKIQDLTTSAKETHAKLALAEARVQEEEQKATRLENEL 191

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251
                ++ +    +  K  N    NR     L A S +  +  +   S   A E
Sbjct: 192 QTQTTKFHQNQETIMAKLTNEDGQNRQLRQKLAALSRQIDELEETNRSLRKAEE 245


>gi|298505600|gb|ADI84323.1| lytic transglycosylase domain protein [Geobacter sulfurreducens
           KN400]
          Length = 748

 Score = 36.8 bits (84), Expect = 9.1,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 111/346 (32%), Gaps = 52/346 (15%)

Query: 47  ILYFFLFAWIL-LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAH------N 99
           +L   L   +  + A ++     P         R  DK Y+A+   L S+         +
Sbjct: 5   LLVVSLACLLFGVSAFAQPMAPVPDAPLRNAALRMKDKDYRAVRDELRSVPPSPERTFLD 64

Query: 100 IPLARKMHSYVSQQHTFH----NEYL----VYLLEVQIALAERQYNIAHEKLEMML---- 147
              AR++  +            +  L        + +  +A  +Y+ A E L+ ++    
Sbjct: 65  GVAARRLEQWPEASELLGVAAKDLPLLADYALFWQAEALMAATRYDEAEEVLQRLVGTWP 124

Query: 148 QIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWS 205
             P  R+     L  ++     D   A     + +++ P       A ++          
Sbjct: 125 DSPTLRKA--RMLLADAQFARKDYRQALASYIRFIELYPSGTDSVTANLKTALCREG--- 179

Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMAS 263
                L+  ++  +E    RAI L   +   A+  +      +A+   ++ L  + +   
Sbjct: 180 -----LDDPRRAVQE---LRAIWLAYPASPVAETAEQELKRLEALGFPAVPLTPDEL--- 228

Query: 264 ICAAKSLISQNKKRKAEVILE--------KIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
           +    +L +  K  +A  +            +      +I      L       +     
Sbjct: 229 LKRGTTLYNLGKYERALAVFNTIPLKEQLAGFNDRVALKIGETLLKLRRYKDAART--FS 286

Query: 316 RLEEINKE---SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
            L E   +   + E+  ++++   + G+ D+A    +   + AP  
Sbjct: 287 SLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTS 332


>gi|226305767|ref|YP_002765727.1| hypothetical protein RER_22800 [Rhodococcus erythropolis PR4]
 gi|226184884|dbj|BAH32988.1| hypothetical protein RER_22800 [Rhodococcus erythropolis PR4]
          Length = 330

 Score = 36.8 bits (84), Expect = 9.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 19/63 (30%), Gaps = 8/63 (12%)

Query: 348 AMLAMKIAPRKEIFLLLAQIEQ-----ANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402
              AM       +F   A+IE+             I  W    + A     W   DG +S
Sbjct: 248 LERAMMREIDDRLFTA-AEIERLTRELGEPIPAGTIRSWHSRDVIAPH--AWKQADGTVS 304

Query: 403 SVW 405
             W
Sbjct: 305 HYW 307


>gi|148653899|ref|YP_001280992.1| tetratricopeptide domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148572983|gb|ABQ95042.1| Tetratricopeptide TPR_4 [Psychrobacter sp. PRwf-1]
          Length = 728

 Score = 36.8 bits (84), Expect = 9.1,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 55/157 (35%), Gaps = 11/157 (7%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
              ++ RA  FL++  +        + ++ I        +G    +     +     D  
Sbjct: 482 RQHKYERAERFLSKVMQENLVLKARQKLVSIQ-----LLQGHADQALATLQQFSHQFDVY 536

Query: 260 IM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRA 314
              ++I  A  L  Q K  +A+ +L       P  +   ++         ++T  K +  
Sbjct: 537 APESAIMQADILRQQGKLPEAQQLLADANARAPD-DTKLLFARAQLLDNEKDTALKHELL 595

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351
             L  IN E+ + ++ ++ +  E G   +      LA
Sbjct: 596 DHLLLINPENPDYILALAVLLFEQGDETEVAKSLTLA 632


>gi|332831350|ref|XP_520008.3| PREDICTED: LOW QUALITY PROTEIN: plectin [Pan troglodytes]
          Length = 4684

 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 68/237 (28%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1540 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1599

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1600 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1642

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R     L +R    A+          A+E L+L           A+  + Q +  
Sbjct: 1643 ESQRKRQAEAELASRVKAEAEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1695

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1696 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1743


>gi|322492654|emb|CBZ27931.1| conserved hypothetical protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 4172

 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 46/165 (27%), Gaps = 12/165 (7%)

Query: 321  NKESVESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379
               + E+ +  +    +       +  + +  M  AP   +   +     ++S +   + 
Sbjct: 3777 RSGNAEARMTRAAAENIHAEPWAWSLQRLITMMNSAPPASVVGAMQTSAVSDSADEGCLD 3836

Query: 380  YWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSL 439
                +A  A+    W     +    WL    +S  L         +     +    + + 
Sbjct: 3837 GGRTAASEAVGTLTWPGWSSHSPEDWLAPVDVSSALPTL-----LRRAASATGARADAAS 3891

Query: 440  EMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQP 484
            E     D  ++ + +      PS+        +      P    P
Sbjct: 3892 EWRSTNDMPRTAMLS------PSVGAEDRTLRAGDASPQPSTAAP 3930


>gi|315648356|ref|ZP_07901456.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
 gi|315276291|gb|EFU39635.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
          Length = 1112

 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 48/175 (27%), Gaps = 44/175 (25%)

Query: 178 TKALDISPDAPWVTE-------AVVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILL 229
            +A      + W          A+ Q     +E+  A   + +      + +       +
Sbjct: 556 DEAYAYFYKSVWSGAWQGAGYLALAQIACEKQEYEEAFELIERSLAAQYRNYKARHLKSI 615

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           I R L          +     E++KL               +    +             
Sbjct: 616 ILRRLGRL-----TEAELWLQETIKLDP-------------MDAGARN------------ 645

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344
               E+ N+Y     E+T  +      L ++ ++     + +++   + G    A
Sbjct: 646 ----ELVNVYREQKQEDTSQRT--LESLFQLMRDDPHHYIALAQDYADAGQYGDA 694


>gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 1033

 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 46/146 (31%), Gaps = 8/146 (5%)

Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227
           G    A     +A+D+ P + W   +    +     +  A+   ++  +   +++     
Sbjct: 629 GRYEEALADFNRAVDLDPGSAWAHASRGAAFNSMGRYEEALADFHRAIELKPDYDWP--- 685

Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287
            L  R       G    +  +   ++ L  +   A      S  S  +  +A  +  +  
Sbjct: 686 -LAGRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAVFTRAI 744

Query: 288 KVNPHPEIANIYTHLLSENTVGKLKR 313
            + P     + +      +   +L R
Sbjct: 745 ALAP----DDRWAFAGRGDAYRRLGR 766


>gi|328544050|ref|YP_004304159.1| TPR repeat [polymorphum gilvum SL003B-26A1]
 gi|326413794|gb|ADZ70857.1| TPR repeat [Polymorphum gilvum SL003B-26A1]
          Length = 400

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 41/123 (33%), Gaps = 5/123 (4%)

Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180
           L  +L  Q AL       A +  E  L            L   + R GDL +A R+A  A
Sbjct: 235 LGDVLAAQDAL-----GPARDAYEAALDRDPADPDVKVKLSTVARRAGDLKAALRHADDA 289

Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240
               PD      AV        E + A T L          +R R ++   R++     G
Sbjct: 290 WSERPDHRDAGNAVGAALAALGERTAARTVLTAVAAGQPAPDRIRDVIEALRAVALPATG 349

Query: 241 DMI 243
           +  
Sbjct: 350 EPA 352


>gi|323446832|gb|EGB02857.1| hypothetical protein AURANDRAFT_34798 [Aureococcus anophagefferens]
          Length = 260

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 77/257 (29%), Gaps = 49/257 (19%)

Query: 178 TKALDIS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKN-AKEWNRNRAIL 228
            +AL I       D   V   ++     Y    ++++    L +      +E+     ++
Sbjct: 3   ERALAIQEREYGRDHKEVAGTLMGLGNAYGSLGDYAKKRDLLERALAILEREYGSENVVV 62

Query: 229 LIAR---SLENADKGDMIASYHDAIESL-----KLCDNSIMASICA---AKSLISQNKKR 277
            +A    +  +   GD +        +L     K   +    +        +  S     
Sbjct: 63  ALALGNLANAHGSLGDYVKQRDVLEHALAILERKFGRDHTTVASTLSDLGDAHGSLGDNA 122

Query: 278 KAEVILEKI-------------WKVNPHPEIANIYTHLLSENTVGK--LKRALRLEEI-- 320
           KA  +LE+              +       + + Y  L  +    +  L+RAL + E+  
Sbjct: 123 KARELLERALAIQEREYGGDHVYVARTLRNLGSAYYKL-GDAAKSRDLLERALAIFELEH 181

Query: 321 NKESVESLVIV---SKIALEMGSIDQAHAKAMLAMKIAPRK-------EIFLLL-AQIEQ 369
             E  E  + +       + +G   +A      A+ I  R+           L+   +  
Sbjct: 182 GSEHSEVAITLTNLGSTHIALGDAAKARDVLERALAIHEREFGRDHVKSAETLMNLCVAH 241

Query: 370 ANSHNTDKILYWTQSAL 386
               +  K     + AL
Sbjct: 242 GELGDATKKRGLLERAL 258


>gi|163733536|ref|ZP_02140979.1| TPR domain protein [Roseobacter litoralis Och 149]
 gi|161393324|gb|EDQ17650.1| TPR domain protein [Roseobacter litoralis Och 149]
          Length = 197

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 3/100 (3%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVS-QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           +A+  G   IAA    LA +  +  +  +     E L  L    + L   +   A E L 
Sbjct: 52  EAVEAGHRLIAAGEYELALRAFNRAALSRGALDAEILSGLGTANLGL--GRLGQAEELLR 109

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             ++  A +     +L       G  N A +Y  +A  +S
Sbjct: 110 RAVRDDAAQPVDYNNLGVLLMEQGKTNEALQYFRRAFALS 149


>gi|107022128|ref|YP_620455.1| hypothetical protein Bcen_0571 [Burkholderia cenocepacia AU 1054]
 gi|116689073|ref|YP_834696.1| hypothetical protein Bcen2424_1050 [Burkholderia cenocepacia
           HI2424]
 gi|105892317|gb|ABF75482.1| TPR repeat protein [Burkholderia cenocepacia AU 1054]
 gi|116647162|gb|ABK07803.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424]
          Length = 390

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 6/140 (4%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+    K  D       
Sbjct: 84  GETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALG- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W+++I    + +  + K      A      + +   + +  A+   
Sbjct: 143 AQRALLTIYEIEKDWNKSIDTAKRIESMSDKPLGVEIAQFHCELAQDALQRKNAAAAAEQ 202

Query: 249 AIESLKLCDNSIMASICAAK 268
              +L +   ++ A++ +  
Sbjct: 203 LRLALTVNPQNVRATVLSGD 222


>gi|46198652|ref|YP_004319.1| hypothetical protein TTC0344 [Thermus thermophilus HB27]
 gi|46196275|gb|AAS80692.1| hypothetical protein TT_C0344 [Thermus thermophilus HB27]
          Length = 862

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 31/191 (16%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LLE +      +Y  A       L+    R  A   L        +   A+ +  +AL 
Sbjct: 369 RLLEAEALRQAGRYREAEALYREALEAGEER--AYLGLVRLFLDTVEPARAKPFLEEALR 426

Query: 183 ISPDA--PWVTEAVV----------------QQYVLAKEWSRAITFLNQKK---KNAKEW 221
             P    P + E ++                + ++     + A+  L + +    +    
Sbjct: 427 RFPGLARPLLAENLLNEGRAGEAEALGFSGPRLFLRQGRPAEALELLKRAEDPGLHRPPQ 486

Query: 222 NRNRAILLIARSLENADKGDMIASYHDA------IESLKLCDNSIMASICAAKSLISQNK 275
           N     LL  R+L     GD       A       E+L       +A      +L++  +
Sbjct: 487 NHREGSLL--RALLECVAGDAEEGLRFAERGRFEAEALGSPFGLSLAEARKGHALLALGR 544

Query: 276 KRKAEVILEKI 286
            R+AE      
Sbjct: 545 LREAEASYRAA 555


>gi|317154599|ref|YP_004122647.1| tetratricopeptide domain-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944850|gb|ADU63901.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 456

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 65/195 (33%), Gaps = 16/195 (8%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP--DA 187
                 Y  A   LE   ++  T   A   L   S R GD   A  + T AL   P   +
Sbjct: 128 YFRAGLYGEARAHLERAARLDPTLWRASNYLGILSDRAGDHERAVEHYTAALAHGPASGS 187

Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247
             +   +   ++  KE+  A+    +  K+     R      +  +L   D+        
Sbjct: 188 GEIYNNLGVVHIARKEYGLAVDAFRRALKDGDVSPR--TYNNLGLALTRLDR------LD 239

Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307
           +A+ES K    +  A+      L++ ++  KA    E+  ++ P     + Y        
Sbjct: 240 EALESFKYAGGAFRANNNLGYVLLTDDQPEKAVPYFERAVELAP-----SYYVKAAENLN 294

Query: 308 VGKL-KRALRLEEIN 321
             +L  R  +     
Sbjct: 295 RARLAARFRKSATAR 309


>gi|297566924|ref|YP_003685896.1| TPR repeat-containing protein [Meiothermus silvanus DSM 9946]
 gi|296851373|gb|ADH64388.1| TPR repeat-containing protein [Meiothermus silvanus DSM 9946]
          Length = 447

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 27/191 (14%)

Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML---QIPAT--REFAVYSLYFES 164
                      L   +  ++      Y  A      +L   +  AT     A   L    
Sbjct: 244 AEALRISPQFPLALQMLGELETRTGDYRAAEGHFNQILFRFRDSATLYDHAAFRGLARIY 303

Query: 165 CRIGDLNSAQRY---ATKALD------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
              GD   A+R+   + K L              + + +++    A ++  A+     + 
Sbjct: 304 KLKGDGAQAERFWVDSEKTLRRDVNSGAFGHQRELAQLLLE-RGRAVDFPEALKLAQSEL 362

Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           K     NR  A  L   +    + G    +     E+L          +  A       +
Sbjct: 363 K-----NRRDAETLSVLAWALLENGRARQAEKAIGEALGYG-------VKDAVLYYRAGQ 410

Query: 276 KRKAEVILEKI 286
            + A    E  
Sbjct: 411 IQAALGKTEAA 421


>gi|220906220|ref|YP_002481531.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219862831|gb|ACL43170.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 542

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 77/256 (30%), Gaps = 44/256 (17%)

Query: 135 QYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192
            Y  A       +   P          L     +  D   A+    +A+ ++P       
Sbjct: 302 DYRGAVADFDRAIRLNPQLDLAYYNRGLARYGLQ--DYRGARADFDQAIRLNPKDADAYN 359

Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
                    +++  A+   ++  +   +++    +    R +      D   +  D  ++
Sbjct: 360 NRGSVRRELQDYRGAVADFDRAIRLNPKFD----LAYYNRGITRRKLQDYGGALADFDQA 415

Query: 253 LKLCDNSIMASICAAKSLISQNKKRK-------AEVILEKIWKVNPHPEIANIY-----T 300
           ++L           A +  ++   R        A    ++  ++N  PE A+IY      
Sbjct: 416 IRLNPR-------DADAYNNRGFVRYGLQDYGGALADFDQAIRLN--PEDADIYNNRGFV 466

Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKE 359
               ++  G +    +   +  +          +AL       A A+A       P  + 
Sbjct: 467 RYGLQDYRGAIADFDQAIRLQPD----------LALAYYHRGLARAQAEERRAALPDYQR 516

Query: 360 IFLLLAQIEQANSHNT 375
                A++ QA  ++ 
Sbjct: 517 A----AELAQAQGNDQ 528


>gi|189350350|ref|YP_001945978.1| Flp pilus assembly protein [Burkholderia multivorans ATCC 17616]
 gi|189334372|dbj|BAG43442.1| Flp pilus assembly protein [Burkholderia multivorans ATCC 17616]
          Length = 282

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 4/133 (3%)

Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179
               LL         Q   +      +L+ P         L   +   GD + A +  T+
Sbjct: 91  PDTILLRADALRMTDQPAASAASYTQLLKTP-LAARGYRGLGLIAGAAGDFDHAVQALTQ 149

Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLEN 236
           A +++P    +   +    +   +   A   L +     ++  +   N A+ L+A     
Sbjct: 150 AAELTPTDASLLSDLAYAKLRNGDVVGARVPLMKAAELDQHNPKIVSNLALYLLAAGRSQ 209

Query: 237 ADKGDMIASYHDA 249
             +  M      A
Sbjct: 210 DAQRLMNQQRLPA 222


>gi|171915256|ref|ZP_02930726.1| cell division cycle protein 48-related protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 479

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363
           E     L R   L  +  +  E+ + ++++ +  G    A  +A   ++  P+     LL
Sbjct: 35  EEAQEILGR---LLALEPDHAEAQLSLARVLVLQGDTSGAAVRAERVLQKHPQNAGAHLL 91

Query: 364 LAQIEQANSH 373
           L++I    + 
Sbjct: 92  LSRIHLTENQ 101


>gi|119897049|ref|YP_932262.1| hypothetical protein azo0758 [Azoarcus sp. BH72]
 gi|119669462|emb|CAL93375.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
          Length = 571

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 60/194 (30%), Gaps = 23/194 (11%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAP 188
           A        A       L+       A+  +L   + + GD   A+R+  + +       
Sbjct: 297 AQQLDDDAAAEALFSRALEAGHPEADAIRINLGQLADKRGDPAGARRWYEQ-VGPGRHFG 355

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                + Q      +   A   L ++  +     R     ++A +    D      +   
Sbjct: 356 EARIRLAQALAKDGKLDEARRILREEGGDEDARRR----FILAEAQLLRDADRSAEALQV 411

Query: 249 AIESLKLCDN----SIMASICAAKS---LISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301
             ++L+   +       +++ A +     + + + RK   +          P+ A+ Y +
Sbjct: 412 VDQALRSAPDDTDLLYESAMLAERLDRMEVMEGRLRKVIAL---------APDHAHAY-N 461

Query: 302 LLSENTVGKLKRAL 315
            L  +   + +R  
Sbjct: 462 ALGYSLADRGQRLE 475


>gi|55980665|ref|YP_143962.1| hypothetical protein TTHA0696 [Thermus thermophilus HB8]
 gi|55772078|dbj|BAD70519.1| hypothetical protein [Thermus thermophilus HB8]
          Length = 702

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 31/191 (16%)

Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182
            LLE +      +Y  A       L+    R  A   L        +   A+ +  +AL 
Sbjct: 209 RLLEAEALRQAGRYREAEALYREALEAGEER--AYLGLVRLFLDTVEPARAKPFLEEALR 266

Query: 183 ISPDA--PWVTEAVV----------------QQYVLAKEWSRAITFLNQKK---KNAKEW 221
             P    P + E ++                + ++     + A+  L + +    +    
Sbjct: 267 RFPGLARPLLAENLLNEGRAGEAEALGFSGPRLFLRQGRPAEALELLKRAEDPGLHRPPQ 326

Query: 222 NRNRAILLIARSLENADKGDMIASYHDA------IESLKLCDNSIMASICAAKSLISQNK 275
           N     LL  R+L     GD       A       E+L       +A      +L++  +
Sbjct: 327 NHREGSLL--RALLECVAGDAEEGLRFAERGRFEAEALGSPFGLSLAEARKGHALLALGR 384

Query: 276 KRKAEVILEKI 286
            R+AE      
Sbjct: 385 LREAEASYRAA 395


>gi|325267969|ref|ZP_08134617.1| putative outer membrane protein [Kingella denitrificans ATCC 33394]
 gi|324980572|gb|EGC16236.1| putative outer membrane protein [Kingella denitrificans ATCC 33394]
          Length = 473

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
             R+  ++ +A+++    +GD   +      +L+   +     +  A+SL      + A 
Sbjct: 99  APRDELLVTLAQAVLARAEGDYRRAVALYRAALETDPDLPTVRLALAQSLFENRADKAAR 158

Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313
             LE   +    P++A  Y  +  +      KR
Sbjct: 159 QELE---RFRQTPDLAPEYAQIGEQYAQALDKR 188


>gi|302338918|ref|YP_003804124.1| hypothetical protein Spirs_2416 [Spirochaeta smaragdinae DSM 11293]
 gi|301636103|gb|ADK81530.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 667

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 11/130 (8%)

Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259
             +++   I+ L        +     A L + R+     +     +Y    +  +    S
Sbjct: 46  KKRDYRGCISLLLPVVATRNDV--ADAALYLGRAWHALGEYTPAIAY--LRDFHRAKPES 101

Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRA 314
           +       ++       ++A   L++ WK  P        +A  Y      +    L   
Sbjct: 102 VAGMFFLGRAYYCGGFPKEALFQLKRAWKAAPQSAQIGTYLAFAYLKAGRHDIALPL--L 159

Query: 315 LRLEEINKES 324
             L E   E+
Sbjct: 160 SNLVEQRPEN 169


>gi|301165998|emb|CBW25572.1| hypothetical protein BMS_0666 [Bacteriovorax marinus SJ]
          Length = 440

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 8/173 (4%)

Query: 85  YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           Y A+     +I  +N+  A+ +   + Q+    +E  V+ L+ +I   E     A +  E
Sbjct: 155 YHAIKE---AIFLNNLDRAKTILEPLKQKLDNLDE--VFYLDARINQEEGNIEEALKLFE 209

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204
             L++      ++ +L  E   +     A  +  K L   P  P     +++  +   ++
Sbjct: 210 QSLEVNHAHYLSLQALATEYSDLKMWKKAYDHTAKILKHYPINPDNLPELIRLSIANHQY 269

Query: 205 SRAI---TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254
              I    F    +  +     N A  L+  S      GD        +E++K
Sbjct: 270 EDLIKYAEFFRSLEVQSPSIKTNIAASLVICSKFFLRTGDRQKGIKTLLEAVK 322


>gi|294055795|ref|YP_003549453.1| TPR repeat-containing protein [Coraliomargarita akajimensis DSM
           45221]
 gi|293615128|gb|ADE55283.1| TPR repeat-containing protein [Coraliomargarita akajimensis DSM
           45221]
          Length = 453

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 4/136 (2%)

Query: 103 ARKMHSYVSQQH--TFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREFAVY 158
           A++M + V  +     + E  + LL    +IA AE     A   L  +++  A    A+ 
Sbjct: 316 AKRMITKVRSKMGSELNEEQDLELLTMSAKIARAEGDTATAIATLTKIVERDALNGEAII 375

Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218
            L       G L  A     +A  I         A  Q  V   E+++A+  L +  K  
Sbjct: 376 ELANNYADEGKLPEAYHRYEQAAKIDAHERDALVAHAQTLVRNAEYTKALPLLQRALKIK 435

Query: 219 KEWNRNRAILLIARSL 234
            + N    +  + R+ 
Sbjct: 436 FDGNLQDYLNRVERAA 451


>gi|283850790|ref|ZP_06368076.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283573713|gb|EFC21687.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 999

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 11/143 (7%)

Query: 127 VQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKA-- 180
                     + A +    +    A     R +A+Y +  E+    +L  A+ YA +A  
Sbjct: 830 ADALENLGDADRARQIWRKLAGDQALEAGKRCYALYFMAKEAMARKELEKAELYAGEAAF 889

Query: 181 -LDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235
               S   P   +A +   V +     ++S+A+ +        KE + + A   +  +  
Sbjct: 890 LFRESGKDPDKLKASLNILVESTRGLGQFSKALRWAEDYAALCKEGDDDWASNRLRTAAI 949

Query: 236 NADKGDMIASYHDAIESLKLCDN 258
               GDM               +
Sbjct: 950 QRAMGDMDGWRKTLSAMRDSAPD 972


>gi|260432819|ref|ZP_05786790.1| adenylate cyclase protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416647|gb|EEX09906.1| adenylate cyclase protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 626

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 39/190 (20%)

Query: 147 LQIPATREFAVYSLYFESCRI------GDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200
           L+   T     Y L+  +              A R + KA+ + P+       +   +  
Sbjct: 367 LEHKPTDNLNAYELFKRAQEQAFTFTKEGNIRAMRLSEKAIALDPNFAGAYIELAWAHNF 426

Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260
              W                 +R  A+ L               ++  A +++KL   + 
Sbjct: 427 GYRWGWTEKT-----------SREEALTL---------------AFEAARKAIKLEPFNF 460

Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-----LLSENTVGKLKRAL 315
            A    A          KA  I +K   +N  P  A +        +        + R  
Sbjct: 461 KAHQVLASITAHSGDLEKAAAIYDKAISLN--PNSAQVLADSIDPLVYGGRAAEAVDRMQ 518

Query: 316 RLEEINKESV 325
               +N    
Sbjct: 519 TAIRLNPHHP 528


>gi|256828050|ref|YP_003156778.1| hypothetical protein Dbac_0235 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577226|gb|ACU88362.1| protein of unknown function DUF181 [Desulfomicrobium baculatum DSM
           4028]
          Length = 572

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 35/135 (25%)

Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQK 214
             L   + R G+++ A  +  +A  + P+A     A            +W+  I  L++ 
Sbjct: 430 RGLV--ALRQGEIDQAASWFARAEPLQPEADDQGLAAFYQAYALSQQGQWAETIPHLDRA 487

Query: 215 KKN----------------------AKEWNRNRAILL-IARSLENADKG-------DMIA 244
            ++                          N   A+ L    +++ A+ G       +   
Sbjct: 488 VQHCPEVKEYFNLRGVAYFKQQEYAGAAANFELALALDSGSAMDLANLGLCHKFMNNADK 547

Query: 245 SYHDAIESLKLCDNS 259
           +     E+L L  + 
Sbjct: 548 ARELLGEALTLDPSL 562


>gi|168704732|ref|ZP_02737009.1| tetratricopeptide repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 607

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 7/149 (4%)

Query: 144 EMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
           E +   P  T               G  + A     +AL + P                 
Sbjct: 154 EALRLDPKHTNALVGRG--TAHATAGQFDKALADYNEALRLDPKQSLAFFNRAALLFRQG 211

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            W+  +T L++  + A E    +A  L+ RS     + ++  +  DA ++++    +  A
Sbjct: 212 RWAATLTDLDEAVRLAPE----KAEYLLFRSTCRMLRSELDEALKDADQAVRSAPRNPDA 267

Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291
            +  +   ++++    A   L ++  ++P
Sbjct: 268 RVHRSSVHLARSNWDAALRDLTEVILLDP 296


>gi|148556840|ref|YP_001264422.1| sporulation domain-containing protein [Sphingomonas wittichii RW1]
 gi|148502030|gb|ABQ70284.1| Sporulation domain protein [Sphingomonas wittichii RW1]
          Length = 483

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 23/217 (10%)

Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160
           P A +M S  +       + +    + + A+A      A  +   +L        A+   
Sbjct: 34  PAAAQMDSATAGDEPVITDPMA---QARDAMARGDPAEALSRYLRVLARDPGDLDALSGA 90

Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220
              +  +GD ++A  +  +A  ISP    V   +    V  ++   A+   +    NA +
Sbjct: 91  GSAALAVGDADAAINFFVRAEKISPRDGRVKAGLGSALVQKEQPRAALRLFD----NATD 146

Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280
                  + + R L    +G+   +  +    L+   +   A+   A SL     K  A 
Sbjct: 147 LGVPPVDVALDRGLAYDLRGETRKAQAEYNLLLRARPD-AEATRRLALSLAMSGDKVGAL 205

Query: 281 VIL--------EKIWKVNPHPEIANIYTHLLSENTVG 309
             L           W+       A  +   ++ +T G
Sbjct: 206 ATLDPLLQKRDIAAWR-------ARAFVLAMTGDTAG 235


>gi|118589177|ref|ZP_01546584.1| TPR repeat [Stappia aggregata IAM 12614]
 gi|118438506|gb|EAV45140.1| TPR repeat [Stappia aggregata IAM 12614]
          Length = 400

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 72/241 (29%), Gaps = 17/241 (7%)

Query: 126 EVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           E          + A     +     P   E A         + G L+ AQ    + +   
Sbjct: 11  EAIALENSGNLDRALVSYLKAQELSPDDTEIAYR-TASALLQTGYLDEAQSQLRRIVFAE 69

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
           PD      ++    +L  +   A          A +        L   +     +     
Sbjct: 70  PDHLNARASLGNCQLLLGDMVNARQNFADVLAQAPDNRN----ALYGLASVLLKEDKPEE 125

Query: 245 SYHDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPH--PEIA----N 297
           +   A   ++L  +   A +   A +    ++K  A     K  K +P+  P +      
Sbjct: 126 AAAPARRLVELLPD-TPAVLSLFADTQARVDQKAAAIAAYRKALKADPNYGPALIGLSQT 184

Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357
           +      +  +    RA    E        L ++S      G+ + A   A+ A+K++PR
Sbjct: 185 LLLRKRFDEVIELTIRA---SERAPADPLPLDLLSDALAGKGAWEDAREAALAALKLSPR 241

Query: 358 K 358
            
Sbjct: 242 S 242


>gi|159901805|ref|YP_001548050.1| hypothetical protein Haur_5295 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894844|gb|ABX07922.1| hypothetical protein Haur_5295 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 849

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 52/188 (27%), Gaps = 38/188 (20%)

Query: 82  DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQIALAERQYN 137
            +G   L     +  A    +AR+    V          +  L    L  + A+      
Sbjct: 449 QRGMMMLTIAQAAARADQHRIARQWLLRVQTAIPLDLLPVQQLAMVGLVAETAVVIGDRE 508

Query: 138 IAHEKLEMMLQ--------------------------------IPATREFAVYSLYFESC 165
            A +  + M                                   PA+R   + +L  ++ 
Sbjct: 509 TARQIADRMDDQRFRSHIQRRIIDAAIAAGAIAEAQTIVQTIPNPASRAAGLQALAVDAA 568

Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225
           R G  ++A +    A+   P A    +A+VQ  +       A   L Q    A       
Sbjct: 569 RRGAWDTAHQSVA-AIVDHPIADATRDALVQAAIDQGRLDDA-ALLAQSIDEAPSKVHAL 626

Query: 226 AILLIARS 233
             L  A +
Sbjct: 627 TALGTAYA 634


>gi|110679390|ref|YP_682397.1| TPR domain-containing protein [Roseobacter denitrificans OCh 114]
 gi|109455506|gb|ABG31711.1| TPR domain protein [Roseobacter denitrificans OCh 114]
          Length = 197

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 3/100 (3%)

Query: 86  KALYTGLMSIAAHNIPLARKMHSYVS-QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144
           +A+  G   IAA    LA +  +  +  +     E L  L    + L   +   A E L 
Sbjct: 52  EAVEAGHRMIAAGEYELALRAFNRAALSRGALDAEILSGLGTANLGL--GRLGQAEELLR 109

Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184
             ++  A +     +L       G+   A +Y  +A  +S
Sbjct: 110 RAVRDDAAQPVDYNNLGVLLMEQGNTAEALQYFRRAFALS 149


>gi|70728347|ref|YP_258096.1| LuxR family transcriptional regulator [Pseudomonas fluorescens
           Pf-5]
 gi|68342646|gb|AAY90252.1| transcriptional regulator, LuxR family [Pseudomonas fluorescens
           Pf-5]
          Length = 848

 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/198 (10%), Positives = 57/198 (28%), Gaps = 36/198 (18%)

Query: 95  IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV--QIAL-----AERQYNIAHEKL-EMM 146
           + A     A +  + +++     +      L    Q           +   A +   E +
Sbjct: 394 LFAGRFEQAGQCMAQMARFAPQPSAAQQRQLLARWQAQQGWLLHLSGRMAAARQHFIEAL 453

Query: 147 LQIPA----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202
            ++      TR   +  L  ++    +L+ AQ    +AL ++       +A +       
Sbjct: 454 DELADSAWTTRLLCLSGLTQQALLGAELDVAQALNREALCLAR----AQDAQL------- 502

Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262
            +   +   + +    +        LL                   ++++L+        
Sbjct: 503 -FEGLLELDHAQLLEQRGAPHRAQSLL------------EQVCERLSMQALRATPLLGRI 549

Query: 263 SICAAKSLISQNKKRKAE 280
           ++   +  + Q    +A 
Sbjct: 550 ALRLGRLALRQGHAEQAA 567


>gi|327275147|ref|XP_003222335.1| PREDICTED: hypothetical protein LOC100562433 [Anolis carolinensis]
          Length = 1510

 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 13/155 (8%)

Query: 105  KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF-E 163
            K    +      H + L      QIA  E       +  +  L+     E A+  L   +
Sbjct: 1124 KAQKALEVLERAHKQALEEQKIAQIAALE----EQEQAWKKSLEEKKMAEAALGELLKTQ 1179

Query: 164  SCRIGDLNSAQRYATKALD-ISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAK 219
                 +   A+R A +  + +      +  A    +++ V A+   +A+  L +  K A 
Sbjct: 1180 RKIQEEQERAERKAREERESVQKALEELEIAKKKSLEEQVKAQ---KALEVLERAHKQAL 1236

Query: 220  EWNRNRAILLIARSLENADKG-DMIASYHDAIESL 253
            E  +   I  +    +   +  +       A+E+L
Sbjct: 1237 EEQKIAQIAALEEQEQAWKRSLEEKKMAEAALEAL 1271


>gi|332160084|ref|YP_004296661.1| lipoprotein NlpI [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664314|gb|ADZ40958.1| lipoprotein NlpI [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330862021|emb|CBX72188.1| lipoprotein nlpI [Yersinia enterocolitica W22703]
          Length = 294

 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 19/212 (8%)

Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203
             +      +      + ++S   G    A+   ++AL I PD P V   +      A  
Sbjct: 54  RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111

Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263
           +  A    +   +    +N  R    + R +     G +  +  D +++    D +    
Sbjct: 112 FDAAYEAFDSVLELDPTYNYAR----LNRGIALYYGGRLPLAQDD-LQAFYQDDPNDPFR 166

Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTV-GKLKR-A 314
                 +  +   + A V L++ ++ +   +       I   Y   +SE T+  +LK  A
Sbjct: 167 SLWLYLVEREIDPKTAAVALQQRYEKS---DRGQWGWNIVEFYLGTISEKTLMERLKADA 223

Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHA 346
                + +   E+   + K  L +G  D A A
Sbjct: 224 TDNTSLAEHLSETDFYLGKHYLSLGDKDTASA 255


>gi|239981984|ref|ZP_04704508.1| hypothetical protein SalbJ_21295 [Streptomyces albus J1074]
          Length = 142

 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTV 308
           ++  L  + +       +         +A  +L +  + +P P    A  +    +  + 
Sbjct: 8   QAAALARDGVRQEPVLGRLEADHGDPAEAVRLLTEEHRRHPGPAASGALGWALHKAGRSA 67

Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
             L R     +    +      +  + L +G    A  +   A+++AP
Sbjct: 68  EALPRLRAAVKDGPNTARPAYHLGMVHLALGERGAARRQLTRALRLAP 115


>gi|227515171|ref|ZP_03945220.1| tetratricopeptide repeat family protein [Lactobacillus fermentum
           ATCC 14931]
 gi|227086503|gb|EEI21815.1| tetratricopeptide repeat family protein [Lactobacillus fermentum
           ATCC 14931]
          Length = 420

 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 94/256 (36%), Gaps = 30/256 (11%)

Query: 133 ERQYNIAHE--KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190
           E   + A +     +      T    +YSL  E   +G  N AQR   K LD  P    +
Sbjct: 13  EGTMDQAQKDFAWALRKDDDDT----LYSLAEELYALGLTNQAQRTYLKLLDRYPQEDEL 68

Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250
             A+ +  +   +   A+++L+Q + ++  +   +++L+ A   +  ++ ++  +     
Sbjct: 69  RTALAEIAIDNGDNDEALSYLSQIQPSSPAY--LQSLLVQADLYQTEEQFEITEA--KLN 124

Query: 251 ESLKLCDNSIMASICA-AKSLISQNKKRKAE----VILEKIWKVNPHPEIANIYTHLLSE 305
           E+ ++  +   A + A A+      K ++A      +++       H E A +       
Sbjct: 125 EAYRMAPD-EPAVLFALAEYYYLIGKFQEAIPFYFALIKAG-----HLEFAKVDIAGRLG 178

Query: 306 NTVGKLKRALR----LEEINKESVESLVI----VSKIALEMGSIDQAHAKAMLAMKIAPR 357
               +L +  +    L ++      S +     ++++AL             LA      
Sbjct: 179 TAYAQLGKFDQALGYLNQVAPGYQTSDIRFQTGLTQLALHQLKEAII-TFKELAEDDGQY 237

Query: 358 KEIFLLLAQIEQANSH 373
             ++  LAQ      H
Sbjct: 238 ASVYPALAQAYAEEHH 253


>gi|149196452|ref|ZP_01873507.1| hypothetical protein LNTAR_14882 [Lentisphaera araneosa HTCC2155]
 gi|149140713|gb|EDM29111.1| hypothetical protein LNTAR_14882 [Lentisphaera araneosa HTCC2155]
          Length = 462

 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 17/209 (8%)

Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA- 218
           L  E  R G+ + A     +ALD+   A  V    +    +      A+       ++A 
Sbjct: 256 LAREFIREGEFDQAVEILQEALDME-HAVDVQLQKLVFTAVEGRIDNALESWKAHLEDAT 314

Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278
            +  +  AI  IA    N ++         A E +    N    ++  A+ L+ +    +
Sbjct: 315 SDLEKEEAIAEIA----NLEQTKKDILLDRAREQVAHFPNDPKTNMAFAEILVERGMFEE 370

Query: 279 AEVILEKIWKVNPHPEIANIY---------THLLSENTVGKLKRALRLEEINKESVESLV 329
           A   L K    +P       Y           +  +  +   K    L   ++   E   
Sbjct: 371 ALDPLTKA-ATSP-RFTTRAYMLRGKCRIGLEIFDKAKIDLSKALESLRPRDRNEAELNQ 428

Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK 358
           ++      +G  D+A A    A  +   +
Sbjct: 429 LLGASLKALGENDEAEAHLTKAKDLGYTE 457


>gi|145595262|ref|YP_001159559.1| transcriptional activator domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145304599|gb|ABP55181.1| transcriptional activator domain [Salinispora tropica CNB-440]
          Length = 1102

 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 27/194 (13%)

Query: 83  KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE--YLVYLLEVQIALAERQYNIAH 140
           +  +AL  G ++    +   A  +   +  +         L        A A   Y  A 
Sbjct: 805 RASQALARGDLAAVHQDGERAVALFRELGDRWGQLQASFPLTN-----RAEATGDYPEAA 859

Query: 141 EKLEMMLQIPATREFAV--------YSLYFESCRIGDLNSAQRYATKALDIS------PD 186
                 L++       +          L   +   GD + A+ +  +AL ++      P 
Sbjct: 860 RLHREGLELAEG--LGLWLEAADRLSGLGRIALLAGDYHRAREFHERALRLAGEQSCKPA 917

Query: 187 APWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
             +    +          + A     + L+  ++   + +  RA+LL         +G +
Sbjct: 918 ELYAQIGLGLGARREGRLADAERLLRSVLDWTRQPGLDADVVRALLLAELGFIAELRGAV 977

Query: 243 IASYHDAIESLKLC 256
            A+     ES  L 
Sbjct: 978 PAAGSLHAESFALA 991


>gi|35186987|gb|AAQ84162.1| PlmR1 [Streptomyces sp. HK803]
          Length = 939

 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 75/242 (30%), Gaps = 43/242 (17%)

Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---LAKEWSRAITF 210
              +  ++  +   GD   A  +A + L          E ++  Y           A  +
Sbjct: 531 LTGLRKIHAPA-NEGDRAQAIFWAEQILQGIRVQSSAVETLLFAYTVLESLGSLRAARPW 589

Query: 211 LNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS---IMASIC 265
             Q  +   A       A++ + ++  + + GD+ ++Y    ++L            +  
Sbjct: 590 FTQLSEALEAHPSPLWEALVSVVQAKISLELGDLGSAYRWIQKALARKPWHEWGAPIASI 649

Query: 266 AA---KSLISQNKKRKAEVILEKIWKVNPHPEIAN--------IYTHLLSENTVGKLKRA 314
           AA   ++L    + ++A  +L+      P P  A         +Y          +L  A
Sbjct: 650 AALLVQTLTEMGRPQEAAEVLD-----RPIPPAAYQGCGGLKYVYARGRYHLATDRLHAA 704

Query: 315 ----------------LRLEEINKESVES--LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                                +N+  +       +++  L +G +  A       ++  P
Sbjct: 705 LADFESCRDMSASLWIETPARVNQAHLMVPWRCGMAEAYLALGDVAGARDALRQQLQQLP 764

Query: 357 RK 358
           ++
Sbjct: 765 KE 766


>gi|294139510|ref|YP_003555488.1| hypothetical protein SVI_0739 [Shewanella violacea DSS12]
 gi|293325979|dbj|BAJ00710.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 790

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
              P   +     +  ++ +     SAQ+Y   +L I  D+PW    + +      +W +
Sbjct: 315 ADDPIAAQALAQGM--QALQEEGAVSAQKYFQASLTIQEDSPWTQAWLARSRYALGQWKQ 372

Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252
           A    +      ++ + +    +     E A +           E+
Sbjct: 373 AEKLFDGITSAQRQADSSLDAFIAYWLAELAYRRGDEQLQGLVDEA 418


>gi|94266706|ref|ZP_01290379.1| Secretin/TonB, short-like [delta proteobacterium MLMS-1]
 gi|93452647|gb|EAT03210.1| Secretin/TonB, short-like [delta proteobacterium MLMS-1]
          Length = 513

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 9/159 (5%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESC-RIGDLNSAQRYATKALD 182
           E Q    +  +  A  K E   Q      R      L   +  R+     A  YA  A  
Sbjct: 333 EAQALERQGDHQGALAKYERAFQRWPDNGRLA--EHLANLALVRLNLSAKAAHYARLAFS 390

Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242
           +                     ++A  + +    +A    R  A  L++ +    +    
Sbjct: 391 LDDGNDNAALLAAISLAQMARPAQAKEYFD----HAIAAPRPAAEALLSYAAFAEEHNSP 446

Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
             +        +L   +  + +  A+      K ++A  
Sbjct: 447 RGALALLWRHQELFGETPDSMMQRARLYDQLGKPQRATA 485


>gi|301060150|ref|ZP_07201017.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300445662|gb|EFK09560.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 252

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 16/151 (10%), Positives = 40/151 (26%), Gaps = 29/151 (19%)

Query: 220 EWNRNRAILLIARSLENADKGDMIASY-------HDAIESLKLCDNSIMASICAAKSLIS 272
           +     A  L A       + D +            A  + +L                 
Sbjct: 104 DPKNADAHYLAAYLAGLEAENDTLKGLSLVPVIERGATAAARLAPGL------------D 151

Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332
                  + +L +++   P P        +   +    +    R    + +  E+ + ++
Sbjct: 152 HGGP---DRMLGELYLQAPEP-------PVSIGDLDKAIHHFRRAVSQDPDFAENRLGLA 201

Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363
           +  LE    + A  +   A+   P      +
Sbjct: 202 EAYLEDKDREGACKQLQQALTRMPPARTMTM 232


>gi|291453836|ref|ZP_06593226.1| predicted protein [Streptomyces albus J1074]
 gi|291356785|gb|EFE83687.1| predicted protein [Streptomyces albus J1074]
          Length = 121

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 2/94 (2%)

Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINK 322
              +         +A  +L +  + +P P    A  +    +  +   L R     +   
Sbjct: 1   MLGRLEADHGDPAEAVRLLTEEHRRHPGPAASGALGWALHKAGRSAEALPRLRAAVKDGP 60

Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            +      +  + L +G    A  +   A+++AP
Sbjct: 61  NTARPAYHLGMVHLALGERGAARRQLTRALRLAP 94


>gi|299821647|ref|ZP_07053535.1| tetratricopeptide repeat family protein [Listeria grayi DSM 20601]
 gi|299817312|gb|EFI84548.1| tetratricopeptide repeat family protein [Listeria grayi DSM 20601]
          Length = 417

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 22/171 (12%)

Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYF 162
                 +    +E ++     +  L++ ++  + +  + +L    T       +VY    
Sbjct: 121 RKLQDAKQLAPDEPIIDFALGEYYLSQGRFASSVQSYQAVLDNGITFIEAAHVSVYERIA 180

Query: 163 ESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNA 218
           E+    G    A  Y  KA   +       + +    +    AKE+++AI  L   K++ 
Sbjct: 181 EALSASGAFEEALPYYEKATAEN----ESMDTLFGYGLTAYQAKEYTQAIHALEHLKEHD 236

Query: 219 KEWNRNRAILLIA--------RSLENADKG--DMIASYHDAIESLKLCDNS 259
             +      L  +        ++LE   +G      +    +E+ KL ++ 
Sbjct: 237 PAYTTLYTYLAKSYQENNKPEQALEVLKEGLVQDEFNKELYLEAAKLAESL 287


>gi|255935303|ref|XP_002558678.1| Pc13g02370 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583298|emb|CAP91306.1| Pc13g02370 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 532

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 75/230 (32%), Gaps = 36/230 (15%)

Query: 82  DKGYKALYTG--------LMSIAAH-----NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128
           D+  + L  G        L++  AH        L +     +S       +    ++  +
Sbjct: 170 DQARQGLGQGVKEPRKWTLLAAEAHLRLDNVNSLGKAQDIAISLLRENSQDPDAMMIRAR 229

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
              A  +   A + L+M L +                   D+  A +       ++    
Sbjct: 230 AFYALGESEQAQKLLKMCLGLDP-----------------DMKQAIKLLRIVQKLARTKE 272

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
               A       AK++ RAI    Q  +         A +L  R+    +  +  ++  D
Sbjct: 273 EGNNAF-----KAKDYHRAIELWAQALEVDPSNKDMNAKILGNRAQAYINLKEYDSAIED 327

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297
             E+L+L    I A  C AK+        +A    + + + NP+ P IA 
Sbjct: 328 CTEALRLDSGYIKAMKCRAKAHGKAGNWEEAVRDYKSVAENNPNEPGIAE 377


>gi|206559298|ref|YP_002230059.1| hypothetical protein BCAL0905 [Burkholderia cenocepacia J2315]
 gi|198035336|emb|CAR51211.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 548

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 68/237 (28%), Gaps = 49/237 (20%)

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
              A   A  A+ + P A           +  +  + A+            W   R  L 
Sbjct: 65  TADALALAECAVRVQPGAATHFNHGYALQMAGRH-ADAVAPYRAALAIDAGWPSLRNNLA 123

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
           IA  L  AD+ + IA    A++        +                        + W  
Sbjct: 124 IALRLSGADRAEEIALLDAAVQ---HDPQDV------------------------QAW-- 154

Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349
                I  +   + + +  G L  A RL E+  ++  ++  V+    E    D+A   A 
Sbjct: 155 -----INLVVARIATHDLDGALACAARLVELAPDNALAMNNVAMAMKEAQRWDEAERHAA 209

Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH------------AMPDPLW 394
            A ++AP    F     I Q    N      W                  A+P P W
Sbjct: 210 RACELAPDDASFRFNLAIIQLVRGNHAA--GWRGHEARWDGAGELRGRRPALPGPRW 264


>gi|190895441|ref|YP_001985733.1| adenylate cyclase protein [Rhizobium etli CIAT 652]
 gi|190699386|gb|ACE93470.1| probable adenylate cyclase protein [Rhizobium etli CIAT 652]
          Length = 590

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 71/200 (35%), Gaps = 20/200 (10%)

Query: 173 AQRYATKALDISPDAPWVTEAV-----VQQYVLAKEWSRA----ITFLNQKKKNAKEWNR 223
           A+    +A+++ P+       +     +        WS +    I    +    A   + 
Sbjct: 364 ARDLLQRAVELDPNFASAHAFLALTHGLDYL---NRWSASPQRSIEQAEEAATLAVARDD 420

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
           +  +   A S+          +  +A  ++ L  N     +   ++L+   +  +A    
Sbjct: 421 SDPVAHWALSVVRLYSRQHDRAISEAERAILLNPNFAEGQVSLGEALLYSGRSEEALACF 480

Query: 284 EKIWKVNPH-PEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337
           ++   +NP+ P++     A  +  L        ++  L+    N  +  S  +++     
Sbjct: 481 DRARVLNPYFPDVVLHFQAWAWFQLRRYEEA--VELLLQRVNRNPVTDVSRALLAACYGH 538

Query: 338 MGSIDQAHAKAMLAMKIAPR 357
           +G +++A A     ++I P 
Sbjct: 539 LGRLEEARATWQEVLRINPD 558


>gi|220918557|ref|YP_002493861.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956411|gb|ACL66795.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 451

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 24/286 (8%)

Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREF---------------AVYSLYFESCRIGD 169
           L  +      +   A E    +                        A ++L       G 
Sbjct: 45  LSARAQRLYAEAVQAQEDQRRLKVPTDWAVLERKWRAVLDAGEVAEARHNLGVALEAQGR 104

Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229
           ++ A+    KAL   P        +        + + A +      ++  E  R R  L 
Sbjct: 105 VDEARAEYQKALAAKPGLRQSAVNLGVLLEKQGDLAGAQSIYAAVVRDFPEDARARERL- 163

Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289
              +    + G +  ++  A E+L     S+ A +  A+  + +     A++IL +  K+
Sbjct: 164 ---AAMYRNAGQLDEAWRLAREALLRDSRSVGAYVVMARVSLQRGNLDVAQLILLRAQKL 220

Query: 290 NPH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345
            P     P +A        +      +    L  ++   + +   +   A++        
Sbjct: 221 APSEPELPFLAGEVLAKQGDVEAAAAQWRKALT-LDDGYLPARRALLDAAVKGRRWPVVA 279

Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391
             A   +   P+     L   + + +    D+ L     A  A  D
Sbjct: 280 EHAQAMVHADPKNAPAWLALGVAKRHQDKPDEALAAYAKAQEASGD 325


>gi|218779222|ref|YP_002430540.1| hypothetical protein Dalk_1372 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760606|gb|ACL03072.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 668

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 13/234 (5%)

Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188
            AL ++ Y  A + L   L +   R+ A+  L     R G    A     KAL+I PD+ 
Sbjct: 426 AALRKQDYPAAEKFLRESLSLKEKRKDALEGLSIALNRQGKTGEAIACIKKALEIEPDSI 485

Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
                +      A       +  ++  +   E      I+L   +    D+ D   +   
Sbjct: 486 KAKSYLGTYCFKAGFHEEGRSIRDEIVQADPE----EVIVLYNIATMFYDEKDYKNAKIW 541

Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHPEIANIY-----THL 302
             ++ +       A        ++Q +   A    LE    +N HP +  ++      ++
Sbjct: 542 FQKNTEANPFQYEAYTFLGSIALNQGETDAALANYLEA---LNLHPNLPEVHNLLGLLYI 598

Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
                            +  +  ++   ++ +   +G+   A A     +K AP
Sbjct: 599 KKGLAAPAEAHFKESMRLAPDFPDAPYNLACLYDLVGNKQAAEALLKALIKTAP 652


>gi|187923216|ref|YP_001894858.1| hypothetical protein Bphyt_1219 [Burkholderia phytofirmans PsJN]
 gi|187714410|gb|ACD15634.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phytofirmans
           PsJN]
          Length = 604

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 79/236 (33%), Gaps = 9/236 (3%)

Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185
                 A  +++ A    + +L        A++ L      +   + ++ +  +AL+++P
Sbjct: 22  HADACFAAGRHHEAIADYQRVLAEQPHNVHALHRLGLALFCVDRPDRSREHFDQALNVAP 81

Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIA 244
           +   + E       L  E   A  F  +         + +R +       E       + 
Sbjct: 82  ERADIWEHRGLIAALDGELIAAEAFYYRAVGLGGGTVSLHRNLGDCLTLSERL-----VE 136

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHL 302
           +    +++L+L      A    A+      + + A     + W ++P   P+  ++ T L
Sbjct: 137 ARGHYLKALELEPTLHHAVRSLARIGTELERYQDAADYWLRAWALDPTHLPDALDLITAL 196

Query: 303 LSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLAMKIAPR 357
                  ++   L    +   S  S    V+           A + A+ A+ + PR
Sbjct: 197 SRAQRGERIDSVLAELRVRFASDASAFQQVAFAFNNAERFSDAISVAIEALGVDPR 252


>gi|32477301|ref|NP_870295.1| hypothetical protein RB12056 [Rhodopirellula baltica SH 1]
 gi|32447852|emb|CAD77370.1| conserved hypothetical protein containing TPR domain
           [Rhodopirellula baltica SH 1]
          Length = 1113

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 96/319 (30%), Gaps = 36/319 (11%)

Query: 81  YDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139
            DK Y     G       +   A       ++Q           L   Q        + A
Sbjct: 280 EDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLYQAGDLSGA 339

Query: 140 HEKLEMMLQ-------IPATREFAVYSLYFE----SCRIGDLNSAQRYATKALDISPDAP 188
             +   +LQ         +    A   L       S       SA   A++ +   P   
Sbjct: 340 ASRFRDVLQGTDPVAATESAHWLARIDLGIANRDPSRTAEAAKSAYDVASELIAKGPQGS 399

Query: 189 WVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRN----RAILLIARSLENADKGDMI 243
           +     +     L+ +  R      Q +  A E + +    RA+   A         +  
Sbjct: 400 FAVALKLDAAEALSLQPDRLNDAFEQYQSIASEHSDHPLAPRALYNAAFVALQLGNTEQA 459

Query: 244 ASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAE----VILEKIWKVNPHPEI--- 295
               D+ ES    D     AS   A++L++      A      +++   K   HP++   
Sbjct: 460 VKLADSFESKFSSDPLAPDASFVGAEALLASGDASSAAERYQTLIDDA-KHRDHPQLATW 518

Query: 296 ----ANIYTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKIALEMGSIDQAHAKAM 349
               A  +          KL R   LE +N   +  E+L++  +  L  G   QA     
Sbjct: 519 ILRGATAWKAAGEPTKTAKLVR-ENLEAMNTPEQKAEALLLAGQAELSSGDAAQAAKTFQ 577

Query: 350 LAMKIAP---RKEIFLLLA 365
            + + AP   R +   L+A
Sbjct: 578 ASREAAPQWARSDEAFLMA 596


>gi|170732361|ref|YP_001764308.1| tetratricopeptide repeat protein [Burkholderia cenocepacia MC0-3]
 gi|254245988|ref|ZP_04939309.1| TPR repeat protein [Burkholderia cenocepacia PC184]
 gi|124870764|gb|EAY62480.1| TPR repeat protein [Burkholderia cenocepacia PC184]
 gi|169815603|gb|ACA90186.1| Tetratricopeptide domain protein [Burkholderia cenocepacia MC0-3]
          Length = 390

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 6/140 (4%)

Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
            + + A    + +L         R+ A+Y L  +  + G L+ A+    K  D       
Sbjct: 84  GETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALG- 142

Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248
              A++  Y + K+W+++I    + +  + K      A      + +   + +  A+   
Sbjct: 143 AQRALLTIYEIEKDWNKSIDTAKRIESMSDKPLGVEIAQFHCELAQDALQRKNAAAAAEQ 202

Query: 249 AIESLKLCDNSIMASICAAK 268
              +L +   ++ A++ +  
Sbjct: 203 LRLALTVNPQNVRATVLSGD 222


>gi|119356787|ref|YP_911431.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119354136|gb|ABL65007.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 199

 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 19/172 (11%)

Query: 178 TKALDISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233
             AL   P        +  A +         S A+T L++         R  A    AR 
Sbjct: 8   ESALREDPHNAEKLYDLAVAYLDLQRN----SEAVTVLDRLIAE----RRRDARAFYARG 59

Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293
           +          +  D + +L L    + A        ++  K+  A   L+K  +++P  
Sbjct: 60  VALLSLSSYRKAGCDFLRTLVLDPAFLAAYKHLGFIQLTLGKEDSAMKTLKKALELDPDC 119

Query: 294 E-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340
                 + ++Y  +   +         +  E+  E+ E    ++   L  G 
Sbjct: 120 ADLYCVLGDVYLDIGEADNAKVA--FEKAFELEPENAEPHCKLAMYHLSKGD 169


>gi|320166364|gb|EFW43263.1| hypothetical protein CAOG_01307 [Capsaspora owczarzaki ATCC 30864]
          Length = 750

 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 10/122 (8%)

Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198
           A E L  M     T   A+    F   R G  + A+    KAL + P        ++Q  
Sbjct: 602 AREALRTMEFNACT--LALVGYVFMHTREG-RDKARLTLEKALTLDPRCMDAISTLIQLL 658

Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----ARSLENADKGDMIASYHDAIESLK 254
           V  ++++ A+  L   ++   +      +++     A++   A   +   +  D  +S++
Sbjct: 659 VFEEKYTEAVETLKMYRQYNPD---IEMLIMTGEVYAQAKMYAQALETFEAAMDIEKSVR 715

Query: 255 LC 256
           + 
Sbjct: 716 VA 717


>gi|309777792|ref|ZP_07672740.1| putative tetratricopeptide repeat family protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914476|gb|EFP60268.1| putative tetratricopeptide repeat family protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 501

 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 27/215 (12%)

Query: 154 EFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211
                  SL          N+A  Y  KA+    D  W+ + ++      ++  + + +L
Sbjct: 241 LLGDVYRSLNRIKESDEQYNTALEYFEKAVQKETDTYWIYQEMIWIAHKQQDMKKKLRYL 300

Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI----CAA 267
           ++   N K+       L+   +   +D    +  Y  AIE+ + C +            A
Sbjct: 301 DRASVNKKD----DLWLMFHYARCYSD----LHEYEKAIEACQFCLSHGEEGREMYDLYA 352

Query: 268 KSLISQNKKRKAEVILEK--------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319
            +L   ++  KA  IL +         W  +   E+   YT L       +     +  +
Sbjct: 353 WNLGRNHEAEKAIEILNERINRHGSDAWNFS---ELGWNYTQLQKYEEAARC--FKKAYD 407

Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354
           +  ++  +  ++    L M  +D A +  + A ++
Sbjct: 408 LEPKNPLNSSMLGWCHLRMNHLDAALSYLLEAQQL 442


>gi|254466337|ref|ZP_05079748.1| CyaF5 adenylate cyclase [Rhodobacterales bacterium Y4I]
 gi|206687245|gb|EDZ47727.1| CyaF5 adenylate cyclase [Rhodobacterales bacterium Y4I]
          Length = 613

 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 19/142 (13%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224
            + GD + A++   +AL ++PD P           LA  W   +  L     +  +    
Sbjct: 384 MQQGDRSGAEQAMQRALQMAPDWPEA-------QALAALWH--LDTLTGPLTHLPQRAAE 434

Query: 225 ----------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274
                      A +L  R+L     G    +   A    +   N     +  A  L    
Sbjct: 435 AAQMTAGLPPAAAVLQLRALAAQFAGQSGEALQLAETLAQDYPNDASGQLTRAWLLHLAG 494

Query: 275 KKRKAEVILEKIWKVNPHPEIA 296
           +   A+ +L++  +++P P+ A
Sbjct: 495 QGGAAQKVLDQARRLDPLPQPA 516


>gi|1477646|gb|AAB05427.1| plectin [Homo sapiens]
 gi|1477651|gb|AAB05428.1| plectin [Homo sapiens]
          Length = 4574

 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 68/237 (28%), Gaps = 39/237 (16%)

Query: 104  RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160
            R+  + V  Q       E L  L +   A  + +   A       +      R   +   
Sbjct: 1430 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLE 1489

Query: 161  YFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217
              E  R    G+L + +  A +A      A                       L ++ ++
Sbjct: 1490 ATERQRGGAEGELQALRARAEEAEAQKRQAQEEA-----------------ERLRRQVQD 1532

Query: 218  AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277
              +  R   + L +R     +          A+E L+L           A+  + Q +  
Sbjct: 1533 ESQRKRQAEVELASRVKAETEAAREKQRALQALEELRLQAE-------EAERRLRQAEVE 1585

Query: 278  KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334
            +A  +            +        +E    +   A +  ++ +   E  V V+++
Sbjct: 1586 RARQVQVA---------LETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQL 1633


>gi|297194120|ref|ZP_06911518.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|297152121|gb|EFH31541.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 526

 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 70/287 (24%), Gaps = 10/287 (3%)

Query: 77  HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136
             R       A+Y  L+         A      + +         V   E +I   +   
Sbjct: 243 SARKQKPERWAVYPALIDAYNGLGRYAA-AGKAMDKLLELQTGPQVQGREARIYWNKGWR 301

Query: 137 NIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
             A            T   +  A++     +   G+   A  + TKAL   P++      
Sbjct: 302 EDAAALAYGATANSRTPTEKAVALHREGELAWERGEAEEAVEHFTKALRTVPESHRSLAG 361

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
             +          A+                     +  S+     GD    Y    + +
Sbjct: 362 RARALAALGRTDEALDDYRSALAKLPLPEYALEAGELYESMGL--NGDAATLYELLRKQV 419

Query: 254 KLCDNS-IMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSENTVG 309
                  +   +  A+          A   L+  W+    N H   A  +    +     
Sbjct: 420 TRAGEHGVDGDLVLARYEADHGDPAAAVRRLQGEWRRGHRNVHVADAMGWALYRAGRPDD 479

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356
            L  A         S      + +I   +G    A      A++  P
Sbjct: 480 ALPFAKVATGQGLRSALFSYHLGEIERALGDYGPARRHIDEALRTNP 526


>gi|242090541|ref|XP_002441103.1| hypothetical protein SORBIDRAFT_09g020460 [Sorghum bicolor]
 gi|241946388|gb|EES19533.1| hypothetical protein SORBIDRAFT_09g020460 [Sorghum bicolor]
          Length = 720

 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 84/280 (30%), Gaps = 27/280 (9%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREF 155
             +  AR+++   +       +  V  +   +     R+   A    +  + ++P  R  
Sbjct: 253 GEVERARRVYERAADLLADDEDAEVLFVAFAEFEERCREVERARAIYKYALDRVPKGRAE 312

Query: 156 AVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206
            +Y  +    +  GD            +      +  +P         ++         R
Sbjct: 313 ELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKDR 372

Query: 207 AITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD--- 257
                 +   N       R       L I  +L E  D  D+  +     E L+L     
Sbjct: 373 IREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAQDIERTREVYKECLRLIPHKK 432

Query: 258 -NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316
                  + AA+  I Q     A  IL     + P  +I   Y  +  E  +G   R   
Sbjct: 433 FTFAKMWLMAAQFEIRQLNLNAARKILGNAIGMAPKGKIFKKYIEI--ELYLGNFDRCRT 490

Query: 317 LE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352
           L     E +  +  +    +++   +   D+A +   LA+
Sbjct: 491 LYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAI 530


>gi|206577250|ref|YP_002236108.1| cellulose synthase operon protein C [Klebsiella pneumoniae 342]
 gi|206566308|gb|ACI08084.1| cellulose synthase operon protein C [Klebsiella pneumoniae 342]
          Length = 1159

 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 6/167 (3%)

Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189
           AL   Q + A        ++  T  +AV  L   +    +  +A+RY  +AL +      
Sbjct: 362 ALKAGQLSQAQNYYAQAQRVDRTDSYAVLGLGDVAAARKEAAAAERYYQQALRLDRGNNL 421

Query: 190 VTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
               +   Y       A  W   +    ++  +  E        L  ++     +G+   
Sbjct: 422 AVRGLANLYRAESPEKASAWIAGLPPAQRRSIDDIE-RSLTNDRLEKQAQALESQGNWAQ 480

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291
           +       L L  +S+  +   A+ L+S  ++++A+ ++  +    P
Sbjct: 481 AAEVQRRRLALDPDSVWITYRLARDLVSAGERQEADALMRAMVNRQP 527


>gi|332706737|ref|ZP_08426798.1| hypothetical protein LYNGBM3L_21080 [Lyngbya majuscula 3L]
 gi|332354621|gb|EGJ34100.1| hypothetical protein LYNGBM3L_21080 [Lyngbya majuscula 3L]
          Length = 337

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 51/185 (27%), Gaps = 11/185 (5%)

Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232
           A     KA  ++P        +        +   +     +  +   ++    A+     
Sbjct: 98  AIVAFEKAAQLNPKLAPAHYNLGLALRQVGKLQASADAFYRATQTDPKF----ALAFANL 153

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW---KV 289
                +  ++  +      +L+L     +A       +       +A    ++     + 
Sbjct: 154 GAALLEGKNLSQAREYLERALELDPKLGVAHYNMGLVMSQLRTPAQAIASFKQAMEFSRN 213

Query: 290 NPHPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347
            P P   +  IY            K   +  +IN +  E+   +  I      +D A A 
Sbjct: 214 APEPAYHLGLIYR--QQGKLEEAKKAFEQAIKINPKYPEAHYNIGGILFNQRDLDGALAA 271

Query: 348 AMLAM 352
              A 
Sbjct: 272 FQQAA 276


>gi|325524161|gb|EGD02309.1| TPR repeat-containing protein [Burkholderia sp. TJI49]
          Length = 458

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 59/199 (29%), Gaps = 11/199 (5%)

Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223
           + R G L  A+     AL  +P                 + + A   + +      +   
Sbjct: 11  AHRAGRLAEAEHGYRAALATNPADADALHLFGVLRHQQGQHAEAADLVGRAVALRPD--- 67

Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283
             A L +         G +  +      +L L     +A      +  +  +   A    
Sbjct: 68  -DAALQLNLGNALKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAALQRHEDAVDAF 126

Query: 284 EKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338
            +  ++   P+ A+IY +L +           L    R  E+      +   ++     M
Sbjct: 127 GRALRLT--PDDASIYNNLGNALNALGRHDDALAAFRRALELRPGHAGAHNNLAMALSAM 184

Query: 339 GSIDQAHAKAMLAMKIAPR 357
           G  D A A    A+   PR
Sbjct: 185 GRADDAIAHFQAAIAAQPR 203


>gi|322496548|emb|CBZ31617.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1184

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 86   KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL-AERQYNIAHEKLE 144
            +AL  G   +   ++  A +  + V + H  ++          IA   E+ Y  A +   
Sbjct: 1063 EALTRGWALLRRGDVAAAHRAWTAVCRAHGTNDVMGTKA-HAYIAEAIEKDYAAAAQWYA 1121

Query: 145  MMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201
              LQ  P  R  A  Y +  E+        A R   +A  +        +AV       
Sbjct: 1122 RSLQLDPQDRMTAYNYGVLLEALLDK-PQEALRLYDRAAAL-------GDAVAGARARE 1172


>gi|294055046|ref|YP_003548704.1| hypothetical protein Caka_1515 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614379|gb|ADE54534.1| hypothetical protein Caka_1515 [Coraliomargarita akajimensis DSM
           45221]
          Length = 565

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281
           N  RA      S      G +I + + ++E+L+L   ++   +   + +      +    
Sbjct: 445 NNRRAATWDLLSQAYLIDGQLINAENASLEALRLDPGNLGYMLDYLRVIQRTKTPKDFLA 504

Query: 282 ILEKIWKVNPH-PE----IANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVSKI 334
           ILE  +   P  PE    +A  Y  +  +    +   KR + L     +    L   ++ 
Sbjct: 505 ILETAYDRFPRSPEIALSLARAYERIEKDKLAARSFYKRFIELA---PDHA--LRAEAEA 559

Query: 335 ALE 337
           A+E
Sbjct: 560 AIE 562


>gi|255558526|ref|XP_002520288.1| conserved hypothetical protein [Ricinus communis]
 gi|223540507|gb|EEF42074.1| conserved hypothetical protein [Ricinus communis]
          Length = 216

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 46/140 (32%), Gaps = 15/140 (10%)

Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255
           +      +W  A+  +               +L   ++    + GD   +   A  + +L
Sbjct: 89  KYREALGKWEAALNLMPGS-----------TVLHEQKAQVLLEIGDAWNALKAATRATEL 137

Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315
             +   A I   ++ ++  +   A    ++   +   P++            +  +KR  
Sbjct: 138 EPSWAEAWITLGRTQLNFGEPDSAIESFDRALALK--PDVKEAQDD--RHAALHLVKRRK 193

Query: 316 RLEEINKESVESLVIVSKIA 335
           +L      + ES  +V+  A
Sbjct: 194 QLHSSGLSANESRFMVADKA 213


>gi|226528754|ref|NP_001152087.1| LOC100285724 [Zea mays]
 gi|195652513|gb|ACG45724.1| electron transporter [Zea mays]
          Length = 681

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEA------VVQQYVLAKEWSRAITFLNQKKKNA 218
              G  ++A   A KA D+ P    +         V +      +  +A  FL+      
Sbjct: 409 MAFGRSDTAVAAAEKARDLDPGNAEIGMVLNNVRLVAKAREQGNDLFKAAKFLDASIAYG 468

Query: 219 K--EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275
           +  +++   ++L   R+   +       +  D  E+L++  N   A +  A S     +
Sbjct: 469 EGLKYDPLNSVLHCNRAACWSKLEKWGKAVDDCNEALRIQPNYTKALLRRAASYAKLER 527


>gi|121609066|ref|YP_996873.1| type 12 methyltransferase [Verminephrobacter eiseniae EF01-2]
 gi|121553706|gb|ABM57855.1| Methyltransferase type 12 [Verminephrobacter eiseniae EF01-2]
          Length = 436

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 17/173 (9%)

Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
            +   +   A   LNQ      +  R   +      L     G +  ++    +++ L  
Sbjct: 19  QIAKGDLKNAALTLNQANARWPQDPRVFML----GGLMAEKAGHLQGAFESLRKAVALAP 74

Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--------EIANIYTHLLSENTVG 309
           +     +  A  L  QN+ ++A  I E++  + P          +IA+      S +T  
Sbjct: 75  DWGPGLLELALLLARQNQFQEAVEIAERLALLEPGNLQVLAGVVDIAH-----RSGHTAM 129

Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362
            ++   R   +    VE   ++++   E G  D+A A     +   P    FL
Sbjct: 130 AVRHLRRGLALVPGDVELRRLLARDLSEQGQHDEALALWSALVAENPADSGFL 182


>gi|114568574|ref|YP_755254.1| hypothetical protein Mmar10_0020 [Maricaulis maris MCS10]
 gi|114339036|gb|ABI64316.1| hypothetical protein Mmar10_0020 [Maricaulis maris MCS10]
          Length = 440

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 160 LYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216
           L+ E+    R GD  SA+R    ALD+ P  P V  A+V     A+        L+   +
Sbjct: 45  LFSEAGRSLRAGDTESARRLMLAALDLKPAHPAVLRALVTIATRAERAEDGFEALDGMVR 104

Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253
               +      L +  + +     D +A+    + + 
Sbjct: 105 AGLVFEIGDETLALLEAAD----SDRLAAIQAELVAN 137


>gi|28376694|gb|AAO41124.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711982|gb|ABF99777.1| DnaJ domain containing protein [Oryza sativa Japonica Group]
 gi|125546357|gb|EAY92496.1| hypothetical protein OsI_14233 [Oryza sativa Indica Group]
          Length = 276

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 27/98 (27%), Gaps = 26/98 (26%)

Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193
                A +  E+       R            R  D+  A   A +A  + P  P V  A
Sbjct: 6   NDEEEAEKAYEL----AENRF-----------RANDIAGALHAAREARRLFPPLPGVASA 50

Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231
           V            A    +     A   ++  AIL + 
Sbjct: 51  V-----------AAYEVHHAAASRADAGDKWYAILAVG 77


>gi|37523228|ref|NP_926605.1| hypothetical protein gll3659 [Gloeobacter violaceus PCC 7421]
 gi|35214231|dbj|BAC91600.1| gll3659 [Gloeobacter violaceus PCC 7421]
          Length = 868

 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 74/249 (29%), Gaps = 48/249 (19%)

Query: 133 ERQYNIAHEKLEMMLQIPATRE--------FAVYSLYFESCRIGDLNSAQRYATKALDIS 184
           +  Y  A    E  L +               +Y L       G+L  AQ  A +AL I 
Sbjct: 97  QGDYTEAEALFERTLALRERTFGPTHPLVAKGLYGLAMLYGARGNLTEAQPLAERALAIR 156

Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244
                    +V    L       +  L   +           +  +A   +   +    A
Sbjct: 157 RRTLGADHPLV-AKSLHG-----LAMLLMARGAGDAAAEGYFLEALAVWKQTLGEEHPEA 210

Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI---LEKIWKVN---PHPE---- 294
           +      ++                   + +  +AE +   +  IW+      HP+    
Sbjct: 211 ARSLHGLAI---------------LCRLRGEVERAEALFLRVRAIWEKAYGPDHPDVARS 255

Query: 295 ---IANIYTH---LLSENTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAH 345
              +A +Y     L     + +   A+R   +        +SL  ++++A+  G  + A 
Sbjct: 256 LHSLAGLYLDQGRLDEAEPLFRRALAIREASLGTNHPGLAQSLQGLAQLAVRQGEPELAR 315

Query: 346 AKAMLAMKI 354
                A++I
Sbjct: 316 TSIARALEI 324


>gi|225559539|gb|EEH07821.1| DnaJ and TPR domain-containing protein [Ajellomyces capsulatus
           G186AR]
          Length = 525

 Score = 36.5 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 12/185 (6%)

Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174
           +  L  L+   +  L       A    +  +    T    +           +G    A 
Sbjct: 29  DTPLSSLISTAKSYLKNGVPQDALPYFDAAISRDPTNYLTIFQRG--AAYLSLGKNTKAL 86

Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIAR 232
                 L I PD         +  + + +W  A   L    KN          A      
Sbjct: 87  LDFNDVLKIKPDFEGALIQRARIRLKSADWDSAKKDLEAAGKNTATEIGELKEAREAAHL 146

Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKI-W 287
           +      GD       +  ++     S+      A+    +   ++       +L+    
Sbjct: 147 AEVAEKNGDWDTCVLQSGVAILKASQSLSLRQLRARCRFERGDIQEGINDLARVLQMAPG 206

Query: 288 KVNPH 292
            V PH
Sbjct: 207 SVEPH 211


>gi|148905848|gb|ABR16086.1| unknown [Picea sitchensis]
          Length = 360

 Score = 36.5 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 55/191 (28%), Gaps = 15/191 (7%)

Query: 98  HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157
            ++ +AR   S   +     N  L   L   +A        +      +++         
Sbjct: 111 GHVAVARAAVSKRVRLKDVENPKLQEALRAAVA---GDLENSERIFTELIEEDPENASGW 167

Query: 158 --YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215
                   S    D  +A    +KA++++P+AP         Y     +  AI       
Sbjct: 168 SNRGSVRLSMDKFDEATAD--FSKAINLAPEAPVPFLNRAIAYEALGYYKDAIEDCKSAI 225

Query: 216 KNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273
            N  E            +L N D    D   +      +  L        +  A  L   
Sbjct: 226 VNDPEE------FAAWYNLGNVDVKVQDYDGALVAYERASALAPGIAGYRLKQALVLFQL 279

Query: 274 NKKRKAEVILE 284
           N+  +A  ++E
Sbjct: 280 NRPVEARKLVE 290


>gi|209515740|ref|ZP_03264603.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
 gi|209503767|gb|EEA03760.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
          Length = 1004

 Score = 36.5 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 1/167 (0%)

Query: 92  LMSIAAHNIPLARKMHSYVSQQHTF-HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150
           ++++A H +    +   Y    H    N+     +   +  ++  +  A  K   ++++ 
Sbjct: 426 VLAVALHRLTQYDEALKYARIAHDLWPNDEDTLQVLASVLASKGLHAEAEAKCRRLIELS 485

Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210
             R      L       G L+ A+++A  ++++ P + +   ++    +     + AI  
Sbjct: 486 PKRAEGHRVLSIILQETGRLDEAEQFARSSMELDPTSSFTPNSLGVTLMQQGRLADAIDE 545

Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257
             +       +      LL   +   A   D + + H          
Sbjct: 546 FRRALAIDPNFELAYNNLLFCMTHNEAIAPDELFAEHRRFAEHFEAP 592


>gi|149924660|ref|ZP_01913012.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
 gi|149814479|gb|EDM74068.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
          Length = 1027

 Score = 36.5 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 29/215 (13%)

Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRNR 225
              ++ A+R+   AL            V     +    W      +       +   R +
Sbjct: 620 QEAIDLAERHGHDALAAELWLAQALRTVSDFRELERGRWELRRATV--ADSRLEPSTRRQ 677

Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-------AKSLISQNKKR- 277
           A L  AR+      GD + +    +E+L+L     +A++         A  + S++ +R 
Sbjct: 678 ARLADARAQLAHVSGDRLDAERAYVEALELSAEDPLAALDRPTYLGNLADLIASEDAERA 737

Query: 278 ---KAEVILEKIWKVNP-HPE-------IANIYTHLLSENTVGKLKRALRLEEINKES-- 324
              + E + E      P HPE       + N    +  E+   KL     +   +     
Sbjct: 738 LEYRREAVFEAEELFGPGHPEVGMPLYKLGNALLDVAGEDEQAKLALQRAVAIWSSSHSR 797

Query: 325 VESLVIVSK-----IALEMGSIDQAHAKAMLAMKI 354
               ++++K     +AL  G    A + A  A + 
Sbjct: 798 PHEELVLAKLVLGTLALRAGRSKLAESYADAAERE 832


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.146    0.443 

Lambda     K      H
   0.267   0.0447    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,068,756,847
Number of Sequences: 14124377
Number of extensions: 464101689
Number of successful extensions: 2266369
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 3033
Number of HSP's successfully gapped in prelim test: 23032
Number of HSP's that attempted gapping in prelim test: 2119281
Number of HSP's gapped (non-prelim): 103954
length of query: 492
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 349
effective length of database: 2,823,007,719
effective search space: 985229693931
effective search space used: 985229693931
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 84 (36.8 bits)